BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780956|ref|YP_003065369.1| thymidylate synthase [Candidatus Liberibacter asiaticus str. psy62] (264 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780956|ref|YP_003065369.1| thymidylate synthase [Candidatus Liberibacter asiaticus str. psy62] gi|254040633|gb|ACT57429.1| thymidylate synthase [Candidatus Liberibacter asiaticus str. psy62] Length = 264 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 264/264 (100%), Positives = 264/264 (100%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL Sbjct: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR Sbjct: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS Sbjct: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL Sbjct: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFRYEDFTLRSYEPHAAILAKVSV Sbjct: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 >gi|315122502|ref|YP_004062991.1| thymidylate synthase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495904|gb|ADR52503.1| thymidylate synthase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 264 Score = 495 bits (1274), Expect = e-138, Method: Compositional matrix adjust. Identities = 234/264 (88%), Positives = 249/264 (94%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LLRHVI GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH KSV++ELL Sbjct: 1 MRQYLNLLRHVITSGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G SN+SYLH+HGVSIWDEWA KDG+LGPIYGVQWRSWPDYDGN IDQISSI++SLR Sbjct: 61 WFLKGGSNISYLHQHGVSIWDEWASKDGDLGPIYGVQWRSWPDYDGNTIDQISSIIRSLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD+GKLSCQLYQRSGDVFLGIPFNIAS Sbjct: 121 TDPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDDGKLSCQLYQRSGDVFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLTMMLASVIGF+YGEFIHTLGDVHLYNNHFEQA LQLSRSP+ P MIINPN+VDL Sbjct: 181 YSLLTMMLASVIGFRYGEFIHTLGDVHLYNNHFEQAHLQLSRSPKKTPHMIINPNVVDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDFTL SYEPHAAI AKV+V Sbjct: 241 SFQYEDFTLESYEPHAAIPAKVTV 264 >gi|150397222|ref|YP_001327689.1| thymidylate synthase [Sinorhizobium medicae WSM419] gi|166231736|sp|A6UB24|TYSY_SINMW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|150028737|gb|ABR60854.1| Thymidylate synthase [Sinorhizobium medicae WSM419] Length = 264 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 183/264 (69%), Positives = 223/264 (84%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HVI+ G+DR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL Sbjct: 1 MRQYLDLLEHVIETGTDRGDRTGTGTRSVFGYQMRFDLSQGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL HGV IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ L+ Sbjct: 61 WFLKGDTNIAYLKEHGVRIWDEWADENGDLGPVYGYQWRSWPTPDGGHIDQIATLVEGLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN AL+D MALPPCHCLFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 TNPNSRRHIVSAWNPALVDDMALPPCHCLFQFYVADGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NHFEQA LQL+R+P+ LP+M INP + DL Sbjct: 181 YALLTMMVAQVTGLEAGDFVHTLGDAHIYRNHFEQAQLQLTRTPKPLPRMEINPAVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFR+EDF L YE + I A V+V Sbjct: 241 SFRFEDFELTGYEADSHIKAPVAV 264 >gi|15965880|ref|NP_386233.1| thymidylate synthase [Sinorhizobium meliloti 1021] gi|307309638|ref|ZP_07589291.1| thymidylate synthase [Sinorhizobium meliloti BL225C] gi|307321777|ref|ZP_07601165.1| thymidylate synthase [Sinorhizobium meliloti AK83] gi|22096227|sp|Q92NQ5|TYSY_RHIME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|15075149|emb|CAC46706.1| Probable thymidylate synthase [Sinorhizobium meliloti 1021] gi|306892599|gb|EFN23397.1| thymidylate synthase [Sinorhizobium meliloti AK83] gi|306899973|gb|EFN30595.1| thymidylate synthase [Sinorhizobium meliloti BL225C] Length = 264 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 184/264 (69%), Positives = 223/264 (84%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HVI G+DR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL Sbjct: 1 MRQYLDLLEHVITTGTDRGDRTGTGTRSVFGYQMRFDLSQGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV+YL +GVSIWDEWAD++GELGP+YG QWRSWP DG IDQI+++V+ L+ Sbjct: 61 WFLRGDTNVAYLKDNGVSIWDEWADENGELGPVYGYQWRSWPTPDGRHIDQIAALVEGLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NHFEQA LQL+R+P+ LP+M INP + D+ Sbjct: 181 YALLTMMVAQVTGLEAGDFVHTLGDAHIYRNHFEQAQLQLTRTPKPLPKMEINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFR+EDF L YE + I A V+V Sbjct: 241 SFRFEDFELVGYEADSHIKAPVAV 264 >gi|325293415|ref|YP_004279279.1| Thymidylate synthase [Agrobacterium sp. H13-3] gi|325061268|gb|ADY64959.1| Thymidylate synthase [Agrobacterium sp. H13-3] Length = 264 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 177/264 (67%), Positives = 226/264 (85%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV+ GSDR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLRHVMDTGSDRGDRTGTGTRSVFGYQMRFDLAEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+ ++++L+ Sbjct: 61 WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIALLIEALK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+HTLGD H+Y NHFEQA LQ++R+P+ LP M +NP++ DL Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHIYANHFEQAKLQMTRTPKALPTMRLNPDVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDFTL +YE + I A ++V Sbjct: 241 SFKFEDFTLENYEADSTIKAPIAV 264 >gi|159185026|ref|NP_355015.2| thymidylate synthase [Agrobacterium tumefaciens str. C58] gi|22096221|sp|Q8UDS3|TYSY_AGRT5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|159140300|gb|AAK87800.2| thymidylate synthase [Agrobacterium tumefaciens str. C58] Length = 264 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 227/264 (85%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV++ GSDR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLRHVMETGSDRGDRTGTGTRSVFGYQMRFDLSEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+ ++++L+ Sbjct: 61 WFLNGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIALLIEALK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V+G + G+F+HTLGD H+Y NHFEQA LQ++R+P+ LP M +NP++ +L Sbjct: 181 YALLTLMVAQVVGLKPGDFVHTLGDAHIYANHFEQAQLQMTRTPKALPTMRLNPDVKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +YE ++I A ++V Sbjct: 241 GFKFEDFTLENYEADSSIKAPIAV 264 >gi|255066674|ref|ZP_05318529.1| thymidylate synthase [Neisseria sicca ATCC 29256] gi|255049002|gb|EET44466.1| thymidylate synthase [Neisseria sicca ATCC 29256] Length = 264 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 182/264 (68%), Positives = 221/264 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVFENGTDKSDRTGTGTRSVFGYQMRFDLSQGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD HLY+NHFEQA LQLSR+PRTLP M INP + DL Sbjct: 181 YALLTMMVAQVCGLEAGEFIHTLGDAHLYSNHFEQAKLQLSRAPRTLPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A V+V Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVAV 264 >gi|325205579|gb|ADZ01032.1| thymidylate synthase [Neisseria meningitidis M04-240196] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 181/264 (68%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R PRTLP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L Y+PH I A VSV Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264 >gi|254805456|ref|YP_003083677.1| Thymidylate synthase [Neisseria meningitidis alpha14] gi|254668998|emb|CBA07364.1| Thymidylate synthase [Neisseria meningitidis alpha14] gi|325142868|gb|EGC65235.1| thymidylate synthase [Neisseria meningitidis 961-5945] gi|325198801|gb|ADY94257.1| thymidylate synthase [Neisseria meningitidis G2136] Length = 264 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 180/264 (68%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R PRTLP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L Y+PH I A VSV Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264 >gi|313575265|emb|CBI71203.1| hypothetical protein [uncultured bacterium] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 180/264 (68%), Positives = 220/264 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV++ G+DR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLRHVMETGTDRGDRTGKGTRSIFGYQMRFDLAEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GVSIWDEWAD+ GELGP+YG QWRSWP DG IDQIS +++ L+ Sbjct: 61 WFLKGDTNVAYLTENGVSIWDEWADEKGELGPVYGYQWRSWPAPDGRHIDQISQLIEGLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNV +D+MALP CHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 VNPNSRRHIVSAWNVGQLDEMALPACHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y++HFEQA LQL+R+P+ LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDTHIYSDHFEQAKLQLTRTPKALPTMRINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFR+EDF L YE I A V+V Sbjct: 241 SFRFEDFALEGYEADPHIKAAVAV 264 >gi|329119726|ref|ZP_08248406.1| thymidylate synthase [Neisseria bacilliformis ATCC BAA-1200] gi|327464175|gb|EGF10480.1| thymidylate synthase [Neisseria bacilliformis ATCC BAA-1200] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 179/264 (67%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V+ G+D+ DRTG GTRS FG+QMRFDL GFPLLTTKK+H +S++HELL Sbjct: 1 MRQYLDLMRRVLDSGTDKSDRTGTGTRSVFGHQMRFDLQDGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YLH + VSIWDEWAD++GELGP+YG QWRSWP DG IDQI++++ ++ Sbjct: 61 WFLRGDTNIRYLHENQVSIWDEWADENGELGPVYGYQWRSWPAPDGRHIDQIANVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ANPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM A V G Q GEF+HTLGD HLY NHFEQA LQL+R PRTLP+M +NP + D+ Sbjct: 181 YALLTMMAAQVCGLQAGEFVHTLGDAHLYRNHFEQAKLQLTREPRTLPKMTLNPAVRDIS 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++DFTL Y+PH I A V+V Sbjct: 241 AFTFDDFTLTGYDPHPHIKAAVAV 264 >gi|313667906|ref|YP_004048190.1| thymidylate synthase [Neisseria lactamica ST-640] gi|313005368|emb|CBN86802.1| thymidylate synthase [Neisseria lactamica 020-06] Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264 >gi|269214226|ref|ZP_05986099.2| thymidylate synthase [Neisseria lactamica ATCC 23970] gi|269210433|gb|EEZ76888.1| thymidylate synthase [Neisseria lactamica ATCC 23970] Length = 266 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEVGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266 >gi|121635345|ref|YP_975590.1| thymidylate synthase [Neisseria meningitidis FAM18] gi|166231719|sp|A1KVB3|TYSY_NEIMF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120867051|emb|CAM10814.1| thymidylate synthase [Neisseria meningitidis FAM18] gi|325132802|gb|EGC55482.1| thymidylate synthase [Neisseria meningitidis M6190] gi|325138705|gb|EGC61257.1| thymidylate synthase [Neisseria meningitidis ES14902] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L Y+PH I A VSV Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264 >gi|222149084|ref|YP_002550041.1| thymidylate synthase [Agrobacterium vitis S4] gi|254790228|sp|B9JXQ5|TYSY_AGRVS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|221736069|gb|ACM37032.1| thymidylate synthase [Agrobacterium vitis S4] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 221/264 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV++ GSDR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLQHVMENGSDRGDRTGTGTRSVFGYQMRFDLAQGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GVSIWDEWAD++G+LGP+YG QWRSWP G IDQI+++V+S++ Sbjct: 61 WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPKPGGGHIDQIANLVESIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY NHFEQA LQL+R P+ LP M INP++ D+ Sbjct: 181 YALLTMMVAQVTGLKAGDFIHTLGDAHLYANHFEQARLQLTRQPKPLPVMRINPDVKDVF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF+L +Y I A ++V Sbjct: 241 GFAFEDFSLENYSADPVIKAPIAV 264 >gi|59801705|ref|YP_208417.1| thymidylate synthase [Neisseria gonorrhoeae FA 1090] gi|239999430|ref|ZP_04719354.1| thymidylate synthase [Neisseria gonorrhoeae 35/02] gi|240014606|ref|ZP_04721519.1| thymidylate synthase [Neisseria gonorrhoeae DGI18] gi|240017051|ref|ZP_04723591.1| thymidylate synthase [Neisseria gonorrhoeae FA6140] gi|240081310|ref|ZP_04725853.1| thymidylate synthase [Neisseria gonorrhoeae FA19] gi|240113520|ref|ZP_04728010.1| thymidylate synthase [Neisseria gonorrhoeae MS11] gi|240116127|ref|ZP_04730189.1| thymidylate synthase [Neisseria gonorrhoeae PID18] gi|240118411|ref|ZP_04732473.1| thymidylate synthase [Neisseria gonorrhoeae PID1] gi|240121128|ref|ZP_04734090.1| thymidylate synthase [Neisseria gonorrhoeae PID24-1] gi|240123956|ref|ZP_04736912.1| thymidylate synthase [Neisseria gonorrhoeae PID332] gi|240126156|ref|ZP_04739042.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679] gi|240128633|ref|ZP_04741294.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035] gi|254494147|ref|ZP_05107318.1| thymidylate synthase [Neisseria gonorrhoeae 1291] gi|260440061|ref|ZP_05793877.1| thymidylate synthase [Neisseria gonorrhoeae DGI2] gi|268595249|ref|ZP_06129416.1| thymidylate synthase [Neisseria gonorrhoeae 35/02] gi|268597414|ref|ZP_06131581.1| thymidylate synthase [Neisseria gonorrhoeae FA19] gi|268599588|ref|ZP_06133755.1| thymidylate synthase [Neisseria gonorrhoeae MS11] gi|268601794|ref|ZP_06135961.1| thymidylate synthase [Neisseria gonorrhoeae PID18] gi|268604126|ref|ZP_06138293.1| thymidylate synthase [Neisseria gonorrhoeae PID1] gi|268682584|ref|ZP_06149446.1| thymidylate synthase [Neisseria gonorrhoeae PID332] gi|268684744|ref|ZP_06151606.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679] gi|268687023|ref|ZP_06153885.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035] gi|75507349|sp|Q5F732|TYSY_NEIG1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|59718600|gb|AAW90005.1| putative thymidylate synthase B [Neisseria gonorrhoeae FA 1090] gi|226513187|gb|EEH62532.1| thymidylate synthase [Neisseria gonorrhoeae 1291] gi|268548638|gb|EEZ44056.1| thymidylate synthase [Neisseria gonorrhoeae 35/02] gi|268551202|gb|EEZ46221.1| thymidylate synthase [Neisseria gonorrhoeae FA19] gi|268583719|gb|EEZ48395.1| thymidylate synthase [Neisseria gonorrhoeae MS11] gi|268585925|gb|EEZ50601.1| thymidylate synthase [Neisseria gonorrhoeae PID18] gi|268588257|gb|EEZ52933.1| thymidylate synthase [Neisseria gonorrhoeae PID1] gi|268622868|gb|EEZ55268.1| thymidylate synthase [Neisseria gonorrhoeae PID332] gi|268625028|gb|EEZ57428.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679] gi|268627307|gb|EEZ59707.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035] Length = 264 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAVVSV 264 >gi|194099130|ref|YP_002002215.1| thymidylate synthase [Neisseria gonorrhoeae NCCP11945] gi|291043350|ref|ZP_06569073.1| thymidylate synthase [Neisseria gonorrhoeae DGI2] gi|193934420|gb|ACF30244.1| thymidylate synthase [Neisseria gonorrhoeae NCCP11945] gi|291012956|gb|EFE04939.1| thymidylate synthase [Neisseria gonorrhoeae DGI2] gi|317164678|gb|ADV08219.1| thymidylate synthase [Neisseria gonorrhoeae TCDC-NG08107] Length = 266 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAVVSV 266 >gi|293398657|ref|ZP_06642835.1| thymidylate synthase [Neisseria gonorrhoeae F62] gi|291611128|gb|EFF40225.1| thymidylate synthase [Neisseria gonorrhoeae F62] Length = 265 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 2 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 62 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 122 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 181 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 182 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 241 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 242 AFKFEDFELEGYDPHPHIKAVVSV 265 >gi|325130730|gb|EGC53467.1| thymidylate synthase [Neisseria meningitidis OX99.30304] gi|325136647|gb|EGC59247.1| thymidylate synthase [Neisseria meningitidis M0579] gi|325201639|gb|ADY97093.1| thymidylate synthase [Neisseria meningitidis M01-240149] gi|325208626|gb|ADZ04078.1| thymidylate synthase [Neisseria meningitidis NZ-05/33] Length = 264 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 177/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264 >gi|297250452|ref|ZP_06934052.1| thymidylate synthase [Neisseria polysaccharea ATCC 43768] gi|296838954|gb|EFH22892.1| thymidylate synthase [Neisseria polysaccharea ATCC 43768] Length = 266 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 177/264 (67%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RH + G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHALDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEVGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266 >gi|15677556|ref|NP_274712.1| thymidylate synthase [Neisseria meningitidis MC58] gi|304386810|ref|ZP_07369075.1| thymidylate synthase [Neisseria meningitidis ATCC 13091] gi|20455363|sp|Q9JY72|TYSY_NEIMB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|7226964|gb|AAF42056.1| thymidylate synthase [Neisseria meningitidis MC58] gi|261392072|emb|CAX49566.1| thymidylate synthase (TS; TSase) [Neisseria meningitidis 8013] gi|304339119|gb|EFM05208.1| thymidylate synthase [Neisseria meningitidis ATCC 13091] gi|316984858|gb|EFV63815.1| thymidylate synthase [Neisseria meningitidis H44/76] gi|325128751|gb|EGC51614.1| thymidylate synthase [Neisseria meningitidis N1568] gi|325140830|gb|EGC63340.1| thymidylate synthase [Neisseria meningitidis CU385] gi|325199699|gb|ADY95154.1| thymidylate synthase [Neisseria meningitidis H44/76] gi|325204666|gb|ADZ00120.1| thymidylate synthase [Neisseria meningitidis M01-240355] Length = 264 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 177/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++++ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L Y+PH I A VSV Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264 >gi|261378912|ref|ZP_05983485.1| thymidylate synthase [Neisseria cinerea ATCC 14685] gi|269144729|gb|EEZ71147.1| thymidylate synthase [Neisseria cinerea ATCC 14685] Length = 264 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 179/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDSGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R R LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLGRECRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L Y+PH I A VSV Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264 >gi|306843264|ref|ZP_07475873.1| thymidylate synthase [Brucella sp. BO2] gi|306286530|gb|EFM58113.1| thymidylate synthase [Brucella sp. BO2] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 220/264 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ LR Sbjct: 61 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ANPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRMPKKLPVMHINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264 >gi|259090368|pdb|3IX6|A Chain A, Crystal Structure Of Thymidylate Synthase Thya From Brucella Melitensis gi|259090369|pdb|3IX6|B Chain B, Crystal Structure Of Thymidylate Synthase Thya From Brucella Melitensis Length = 360 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 97 MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 156 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 157 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 216 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 217 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 276 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL Sbjct: 277 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 336 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 337 AFRFEDFRLDGYEADPTIKAPIAV 360 >gi|308389827|gb|ADO32147.1| thymidylate synthase [Neisseria meningitidis alpha710] Length = 266 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY+NHFEQA LQL R P LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHFEQAALQLEREPCALPVMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266 >gi|325134758|gb|EGC57395.1| thymidylate synthase [Neisseria meningitidis M13399] gi|325145101|gb|EGC67384.1| thymidylate synthase [Neisseria meningitidis M01-240013] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY+NHFEQA LQL R P LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHFEQAALQLEREPCALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264 >gi|261365658|ref|ZP_05978541.1| thymidylate synthase [Neisseria mucosa ATCC 25996] gi|288565822|gb|EFC87382.1| thymidylate synthase [Neisseria mucosa ATCC 25996] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 179/264 (67%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G+D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL Sbjct: 1 MKAYHDLMRHVLENGTDKSDRTGTGTRSVFGYQMRFDLSQGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q GEFIHT GD HLY+NHFEQA LQLSR R LP M INP + DL Sbjct: 181 YALLTMMIAQVCGLQAGEFIHTFGDAHLYSNHFEQAKLQLSRDFRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A V+V Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVAV 264 >gi|218768724|ref|YP_002343236.1| thymidylate synthase [Neisseria meningitidis Z2491] gi|20455362|sp|Q9JT57|TYSY_NEIMA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|121052732|emb|CAM09075.1| thymidylate synthase [Neisseria meningitidis Z2491] gi|319410956|emb|CBY91352.1| thymidylate synthase (TS; TSase) [Neisseria meningitidis WUE 2594] Length = 264 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++++ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264 >gi|254671837|emb|CBA03996.1| Thymidylate synthase [Neisseria meningitidis alpha275] Length = 266 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++++ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266 >gi|225076554|ref|ZP_03719753.1| hypothetical protein NEIFLAOT_01602 [Neisseria flavescens NRL30031/H210] gi|224952117|gb|EEG33326.1| hypothetical protein NEIFLAOT_01602 [Neisseria flavescens NRL30031/H210] Length = 266 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 216/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL +GFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGRGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR R+LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRSLPTMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266 >gi|71906233|ref|YP_283820.1| thymidylate synthase [Dechloromonas aromatica RCB] gi|123733364|sp|Q47II1|TYSY_DECAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|71845854|gb|AAZ45350.1| thymidylate synthase [Dechloromonas aromatica RCB] Length = 264 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FG+QMRFDLS+GFP++TTKK+H KS++HELL Sbjct: 1 MQPYLDLMRHVLDNGNDKSDRTGTGTRSVFGWQMRFDLSQGFPVMTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL +GV IWDEWAD++G+LGP+YG QWR W DG VIDQI+ +V SL+ Sbjct: 61 WFIQGDTNIKYLQENGVKIWDEWADENGDLGPVYGKQWRRWETPDGRVIDQITQLVNSLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN +D MALPPCHCLFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNPGDVDNMALPPCHCLFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+L TMMLA V G+Q GEF+HT GD HLY+NHFEQA LQLSR R LP M INP + DL Sbjct: 181 YALFTMMLAQVCGYQPGEFVHTFGDAHLYSNHFEQAKLQLSRDTRPLPTMWINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L Y+PH I A V+V Sbjct: 241 AFRFEDFRLEGYDPHPHIPAPVAV 264 >gi|226939715|ref|YP_002794788.1| thymidylate synthase [Laribacter hongkongensis HLHK9] gi|254790240|sp|C1D4I5|TYSY_LARHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226714641|gb|ACO73779.1| TysY [Laribacter hongkongensis HLHK9] Length = 264 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 180/264 (68%), Positives = 216/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L++HV+ G+D+ DRTG GTRS FGYQMRFDL++GFPLLTTKK+H +S+VHELL Sbjct: 1 MKAYLELMQHVLDHGTDKADRTGTGTRSVFGYQMRFDLAQGFPLLTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G+LGP+YG QWRSWP DG IDQIS ++ +R Sbjct: 61 WFLAGDTNIRYLKDNGVRIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQISGLLDMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPALVDDMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G Q GEF+HT GD HLY+NHFEQA LQL R PR LP M +NP + DL Sbjct: 181 YALLTLMVAQVTGLQPGEFVHTFGDAHLYSNHFEQARLQLQREPRALPVMKLNPVVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDFTL Y+PH I A+VSV Sbjct: 241 AFRFEDFTLEGYDPHPHIKAEVSV 264 >gi|254719433|ref|ZP_05181244.1| thymidylate synthase [Brucella sp. 83/13] gi|265984437|ref|ZP_06097172.1| thymidylate synthase [Brucella sp. 83/13] gi|306839209|ref|ZP_07472026.1| thymidylate synthase [Brucella sp. NF 2653] gi|306844297|ref|ZP_07476889.1| thymidylate synthase [Brucella sp. BO1] gi|264663029|gb|EEZ33290.1| thymidylate synthase [Brucella sp. 83/13] gi|306275369|gb|EFM57110.1| thymidylate synthase [Brucella sp. BO1] gi|306405756|gb|EFM62018.1| thymidylate synthase [Brucella sp. NF 2653] Length = 264 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 177/264 (67%), Positives = 220/264 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 61 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ANPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264 >gi|319637791|ref|ZP_07992557.1| thymidylate synthase [Neisseria mucosa C102] gi|317400946|gb|EFV81601.1| thymidylate synthase [Neisseria mucosa C102] Length = 264 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 179/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV+ G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL Sbjct: 1 MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKENNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR R+LP M INP I DL Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQARLQLSRDFRSLPTMKINPEIKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264 >gi|148560322|ref|YP_001259294.1| thymidylate synthase [Brucella ovis ATCC 25840] gi|166231694|sp|A5VRE7|TYSY_BRUO2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148371579|gb|ABQ61558.1| thymidylate synthase [Brucella ovis ATCC 25840] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDHGVDRDDRTGTGTRSAFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 61 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264 >gi|190892527|ref|YP_001979069.1| thymidylate synthase [Rhizobium etli CIAT 652] gi|190697806|gb|ACE91891.1| thymidylate synthase protein [Rhizobium etli CIAT 652] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MQQYLDLLKHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGETNIGYLRDHGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPNSRRHIVSAWNPAEVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HT GD HLY+NHF+QA LQL+R P+ LP M INP++ D+ Sbjct: 181 YALLTMMVAQVTGLKSGDFVHTFGDAHLYHNHFDQAKLQLTRRPKPLPFMRINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF +EDF L YE A I A ++V Sbjct: 241 SFTFEDFELIGYEADANIKAPIAV 264 >gi|161579483|ref|NP_296349.2| thymidylate synthase [Deinococcus radiodurans R1] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD LRH+ G+D+ DRTG GTRS FGYQMRFDLS+GFPL+TTK+VH KS+++ELL Sbjct: 1 MKQYLDFLRHIRDHGTDKMDRTGTGTRSVFGYQMRFDLSEGFPLVTTKRVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSNV +L HGV+IWDEWA + GELGP+YGVQWRSWPDY G IDQIS +++ ++ Sbjct: 61 WFLRGDSNVRWLQEHGVTIWDEWAREGGELGPVYGVQWRSWPDYGGGQIDQISQVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ID+MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVAQIDEMALPPCHLLFQFYVADGKLSCQLYQRSADSFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFI T GD H+Y+NH EQ + QL R PR LP+M +NP + D+ Sbjct: 181 YALLTMMVAQVCGLEPGEFIWTGGDCHIYSNHMEQVERQLKREPRPLPKMRLNPAVKDMF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+YEDFTL Y+PH I A+V+V Sbjct: 241 AFQYEDFTLEGYDPHPGIKAEVAV 264 >gi|319408804|emb|CBI82461.1| Thymidylate synthase [Bartonella schoenbuchensis R1] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 182/264 (68%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRF+L GFPLLTTKK+H +S+++ELL Sbjct: 1 MKVYLDLLSHVLSNGVDRSDRTGVGTRSIFGYQMRFNLQAGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+++L HGVSIWDEWADKDG LGPIYG QWRSWP DG IDQIS+++ ++ Sbjct: 61 WFLRGDTNIAWLKEHGVSIWDEWADKDGNLGPIYGFQWRSWPAPDGRYIDQISNLLDTIN 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALI+ MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNPALIEDMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY NHFEQA QLSR+P LP M INP + DL Sbjct: 181 YALLTMMIAQVTGLKVGDFIHTLGDAHLYVNHFEQAKQQLSRTPGVLPVMFINPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +YE I A V+V Sbjct: 241 SFKFEDFNLLNYEAQPHIKAPVAV 264 >gi|17986891|ref|NP_539525.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M] gi|23502270|ref|NP_698397.1| thymidylate synthase [Brucella suis 1330] gi|62290293|ref|YP_222086.1| thymidylate synthase [Brucella abortus bv. 1 str. 9-941] gi|82700216|ref|YP_414790.1| thymidylate synthase [Brucella melitensis biovar Abortus 2308] gi|163843654|ref|YP_001628058.1| thymidylate synthase [Brucella suis ATCC 23445] gi|189024526|ref|YP_001935294.1| thymidylate synthase [Brucella abortus S19] gi|225627851|ref|ZP_03785888.1| thymidylate synthase [Brucella ceti str. Cudo] gi|225852881|ref|YP_002733114.1| thymidylate synthase [Brucella melitensis ATCC 23457] gi|237815800|ref|ZP_04594797.1| thymidylate synthase [Brucella abortus str. 2308 A] gi|254689595|ref|ZP_05152849.1| thymidylate synthase [Brucella abortus bv. 6 str. 870] gi|254694085|ref|ZP_05155913.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya] gi|254697737|ref|ZP_05159565.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59] gi|254702121|ref|ZP_05163949.1| thymidylate synthase [Brucella suis bv. 5 str. 513] gi|254704658|ref|ZP_05166486.1| thymidylate synthase [Brucella suis bv. 3 str. 686] gi|254708073|ref|ZP_05169901.1| thymidylate synthase [Brucella pinnipedialis M163/99/10] gi|254710443|ref|ZP_05172254.1| thymidylate synthase [Brucella pinnipedialis B2/94] gi|254714436|ref|ZP_05176247.1| thymidylate synthase [Brucella ceti M644/93/1] gi|254717333|ref|ZP_05179144.1| thymidylate synthase [Brucella ceti M13/05/1] gi|254730626|ref|ZP_05189204.1| thymidylate synthase [Brucella abortus bv. 4 str. 292] gi|256031937|ref|ZP_05445551.1| thymidylate synthase [Brucella pinnipedialis M292/94/1] gi|256045031|ref|ZP_05447932.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1] gi|256061458|ref|ZP_05451602.1| thymidylate synthase [Brucella neotomae 5K33] gi|256113948|ref|ZP_05454736.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether] gi|256160135|ref|ZP_05457829.1| thymidylate synthase [Brucella ceti M490/95/1] gi|256255341|ref|ZP_05460877.1| thymidylate synthase [Brucella ceti B1/94] gi|256257844|ref|ZP_05463380.1| thymidylate synthase [Brucella abortus bv. 9 str. C68] gi|256263636|ref|ZP_05466168.1| thymidylate synthase [Brucella melitensis bv. 2 str. 63/9] gi|256369815|ref|YP_003107326.1| thymidylate synthase [Brucella microti CCM 4915] gi|260169073|ref|ZP_05755884.1| thymidylate synthase [Brucella sp. F5/99] gi|260546835|ref|ZP_05822574.1| thymidylate synthase [Brucella abortus NCTC 8038] gi|260565371|ref|ZP_05835855.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M] gi|260566096|ref|ZP_05836566.1| thymidylate synthase [Brucella suis bv. 4 str. 40] gi|260755122|ref|ZP_05867470.1| thymidylate synthase [Brucella abortus bv. 6 str. 870] gi|260758341|ref|ZP_05870689.1| thymidylate synthase [Brucella abortus bv. 4 str. 292] gi|260762167|ref|ZP_05874510.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59] gi|260884134|ref|ZP_05895748.1| thymidylate synthase [Brucella abortus bv. 9 str. C68] gi|261214383|ref|ZP_05928664.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya] gi|261219162|ref|ZP_05933443.1| thymidylate synthase [Brucella ceti M13/05/1] gi|261222542|ref|ZP_05936823.1| thymidylate synthase [Brucella ceti B1/94] gi|261315574|ref|ZP_05954771.1| thymidylate synthase [Brucella pinnipedialis M163/99/10] gi|261318013|ref|ZP_05957210.1| thymidylate synthase [Brucella pinnipedialis B2/94] gi|261322224|ref|ZP_05961421.1| thymidylate synthase [Brucella ceti M644/93/1] gi|261325464|ref|ZP_05964661.1| thymidylate synthase [Brucella neotomae 5K33] gi|261752691|ref|ZP_05996400.1| thymidylate synthase [Brucella suis bv. 5 str. 513] gi|261755351|ref|ZP_05999060.1| thymidylate synthase [Brucella suis bv. 3 str. 686] gi|261758577|ref|ZP_06002286.1| thymidylate synthase [Brucella sp. F5/99] gi|265989043|ref|ZP_06101600.1| thymidylate synthase [Brucella pinnipedialis M292/94/1] gi|265991458|ref|ZP_06104015.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1] gi|265995295|ref|ZP_06107852.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether] gi|265998507|ref|ZP_06111064.1| thymidylate synthase [Brucella ceti M490/95/1] gi|294852725|ref|ZP_06793398.1| thymidylate synthase [Brucella sp. NVSL 07-0026] gi|297248681|ref|ZP_06932399.1| thymidylate synthase [Brucella abortus bv. 5 str. B3196] gi|54039795|sp|P67043|TYSY_BRUSU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54042281|sp|P67042|TYSY_BRUME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|75505250|sp|Q57CA9|TYSY_BRUAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123727399|sp|Q2YS22|TYSY_BRUA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036929|sp|B0CHI7|TYSY_BRUSI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790231|sp|C0RE38|TYSY_BRUMB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|17982532|gb|AAL51789.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M] gi|23348244|gb|AAN30312.1| thymidylate synthase [Brucella suis 1330] gi|62196425|gb|AAX74725.1| ThyA, thymidylate synthase [Brucella abortus bv. 1 str. 9-941] gi|82616317|emb|CAJ11374.1| Thymidylate synthase [Brucella melitensis biovar Abortus 2308] gi|163674377|gb|ABY38488.1| Thymidylate synthase [Brucella suis ATCC 23445] gi|189020098|gb|ACD72820.1| Thymidylate synthase [Brucella abortus S19] gi|225617856|gb|EEH14901.1| thymidylate synthase [Brucella ceti str. Cudo] gi|225641246|gb|ACO01160.1| thymidylate synthase [Brucella melitensis ATCC 23457] gi|237789098|gb|EEP63309.1| thymidylate synthase [Brucella abortus str. 2308 A] gi|255999978|gb|ACU48377.1| thymidylate synthase [Brucella microti CCM 4915] gi|260095885|gb|EEW79762.1| thymidylate synthase [Brucella abortus NCTC 8038] gi|260151439|gb|EEW86533.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M] gi|260155614|gb|EEW90694.1| thymidylate synthase [Brucella suis bv. 4 str. 40] gi|260668659|gb|EEX55599.1| thymidylate synthase [Brucella abortus bv. 4 str. 292] gi|260672599|gb|EEX59420.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59] gi|260675230|gb|EEX62051.1| thymidylate synthase [Brucella abortus bv. 6 str. 870] gi|260873662|gb|EEX80731.1| thymidylate synthase [Brucella abortus bv. 9 str. C68] gi|260915990|gb|EEX82851.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya] gi|260921126|gb|EEX87779.1| thymidylate synthase [Brucella ceti B1/94] gi|260924251|gb|EEX90819.1| thymidylate synthase [Brucella ceti M13/05/1] gi|261294914|gb|EEX98410.1| thymidylate synthase [Brucella ceti M644/93/1] gi|261297236|gb|EEY00733.1| thymidylate synthase [Brucella pinnipedialis B2/94] gi|261301444|gb|EEY04941.1| thymidylate synthase [Brucella neotomae 5K33] gi|261304600|gb|EEY08097.1| thymidylate synthase [Brucella pinnipedialis M163/99/10] gi|261738561|gb|EEY26557.1| thymidylate synthase [Brucella sp. F5/99] gi|261742444|gb|EEY30370.1| thymidylate synthase [Brucella suis bv. 5 str. 513] gi|261745104|gb|EEY33030.1| thymidylate synthase [Brucella suis bv. 3 str. 686] gi|262553131|gb|EEZ08965.1| thymidylate synthase [Brucella ceti M490/95/1] gi|262766408|gb|EEZ12197.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether] gi|263002242|gb|EEZ14817.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1] gi|263093689|gb|EEZ17694.1| thymidylate synthase [Brucella melitensis bv. 2 str. 63/9] gi|264661240|gb|EEZ31501.1| thymidylate synthase [Brucella pinnipedialis M292/94/1] gi|294821314|gb|EFG38313.1| thymidylate synthase [Brucella sp. NVSL 07-0026] gi|297175850|gb|EFH35197.1| thymidylate synthase [Brucella abortus bv. 5 str. B3196] gi|326409422|gb|ADZ66487.1| Thymidylate synthase [Brucella melitensis M28] gi|326539129|gb|ADZ87344.1| thymidylate synthase [Brucella melitensis M5-90] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 61 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264 >gi|218463520|ref|ZP_03503611.1| thymidylate synthase [Rhizobium etli Kim 5] Length = 264 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 175/264 (66%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HVI+ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MQQYLDLLKHVIENGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ + Sbjct: 61 WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLIKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPNSRRHIVSAWNPAEVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY+NHFEQA LQL+R P+ LP M INP++ D+ Sbjct: 181 YALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFEQAKLQLTRRPKPLPFMRINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L YE A+I A ++V Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264 >gi|294669491|ref|ZP_06734558.1| hypothetical protein NEIELOOT_01389 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308404|gb|EFE49647.1| hypothetical protein NEIELOOT_01389 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 264 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 174/264 (65%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L+RHV++ G D+ DRTG GTRS FGYQMRFDL++GFPLLTTKK+H +S++HELL Sbjct: 1 MKQYLGLMRHVMQNGHDKSDRTGTGTRSVFGYQMRFDLAQGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q GEF+HTLGD H+Y+NHFEQ +LQL+R PR LP+M +N + DL Sbjct: 181 YALLTMMIAQVCGLQPGEFVHTLGDAHIYSNHFEQTELQLAREPRALPKMKLNHAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y+PH I A V+V Sbjct: 241 DFKFEDFELADYDPHPHIKAAVAV 264 >gi|163758991|ref|ZP_02166077.1| thymidylate synthase protein [Hoeflea phototrophica DFL-43] gi|162283395|gb|EDQ33680.1| thymidylate synthase protein [Hoeflea phototrophica DFL-43] Length = 264 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLR V+ G DR DRTG GT S FG+QMRFDL+ GFP LTTKK+H +S++HELL Sbjct: 1 MQQYHDLLRLVLDQGFDRDDRTGTGTLSVFGHQMRFDLAAGFPALTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +G+SIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGDTNIAYLKANGISIWDEWADENGDLGPVYGAQWRSWPAPDGTTIDQIANVVRQIE 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPSSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY NHF+QA LQLSR RTLP M INP I DL Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDAHLYKNHFDQAHLQLSRESRTLPVMRINPEITDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F Y+DF L Y+PH AI A ++V Sbjct: 241 AFTYDDFKLEGYDPHPAISAPIAV 264 >gi|284799616|ref|ZP_05984412.2| thymidylate synthase [Neisseria subflava NJ9703] gi|284797529|gb|EFC52876.1| thymidylate synthase [Neisseria subflava NJ9703] Length = 303 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV+ G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL Sbjct: 40 MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 99 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 100 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 159 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 160 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 219 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR R LP M INP + DL Sbjct: 220 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRKLPTMKINPEVKDLF 279 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 280 AFKFEDFELEGYDPHPHIKAAVSV 303 >gi|6460459|gb|AAF12166.1|AE002092_4 thymidylate synthase [Deinococcus radiodurans R1] Length = 387 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 177/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 + QYLD LRH+ G+D+ DRTG GTRS FGYQMRFDLS+GFPL+TTK+VH KS+++ELL Sbjct: 124 VKQYLDFLRHIRDHGTDKMDRTGTGTRSVFGYQMRFDLSEGFPLVTTKRVHLKSIIYELL 183 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSNV +L HGV+IWDEWA + GELGP+YGVQWRSWPDY G IDQIS +++ ++ Sbjct: 184 WFLRGDSNVRWLQEHGVTIWDEWAREGGELGPVYGVQWRSWPDYGGGQIDQISQVIEQIK 243 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ID+MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS Sbjct: 244 TNPDSRRLIVSAWNVAQIDEMALPPCHLLFQFYVADGKLSCQLYQRSADSFLGVPFNIAS 303 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFI T GD H+Y+NH EQ + QL R PR LP+M +NP + D+ Sbjct: 304 YALLTMMVAQVCGLEPGEFIWTGGDCHIYSNHMEQVERQLKREPRPLPKMRLNPAVKDMF 363 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+YEDFTL Y+PH I A+V+V Sbjct: 364 AFQYEDFTLEGYDPHPGIKAEVAV 387 >gi|153009122|ref|YP_001370337.1| thymidylate synthase [Ochrobactrum anthropi ATCC 49188] gi|166231721|sp|A6WZV4|TYSY_OCHA4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|151561010|gb|ABS14508.1| Thymidylate synthase [Ochrobactrum anthropi ATCC 49188] Length = 264 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G+DR DRTG GTRS FGYQMRF+L +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDNGTDRGDRTGTGTRSVFGYQMRFNLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GVSIWDEWADK+G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 61 WFLKGDTNIAYLKENGVSIWDEWADKNGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 GNPNSRRLIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y NHF+QA LQL+R P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVAGLKPGEFIHTLGDAHIYANHFDQARLQLTRIPKKLPTMWINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFQLEGYEADPTIKAPIAV 264 >gi|304392191|ref|ZP_07374133.1| thymidylate synthase [Ahrensia sp. R2A130] gi|303296420|gb|EFL90778.1| thymidylate synthase [Ahrensia sp. R2A130] Length = 272 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 175/264 (66%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G+DR DRTG GTRS FG+QMRFDL+ GFP++TTKK+H +S++ ELL Sbjct: 9 MRAYLDLLQHILDNGTDRGDRTGTGTRSVFGHQMRFDLADGFPMVTTKKLHLRSIIIELL 68 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G SN++YL + V IWDEWAD++GELGP+YGVQWRSWP DG+ IDQI+++++ ++ Sbjct: 69 WFLKGSSNIAYLQDNKVRIWDEWADENGELGPVYGVQWRSWPKSDGSTIDQIANVIEQIK 128 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR +VSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIAS Sbjct: 129 ANPNSRRLMVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSGDVFLGVPFNIAS 188 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD HLY NHF+QA QLSR PR LPQM I+P++ D+ Sbjct: 189 YALLTMMVAQVTGLKPGEFIHTLGDAHLYANHFDQAREQLSREPRALPQMKIDPSVDDIF 248 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YE F L Y+PH I AKV+V Sbjct: 249 GFEYEHFELTGYDPHPHIAAKVAV 272 >gi|121602325|ref|YP_989208.1| thymidylate synthase [Bartonella bacilliformis KC583] gi|166231691|sp|A1UTA5|TYSY_BARBK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120614502|gb|ABM45103.1| thymidylate synthase [Bartonella bacilliformis KC583] Length = 264 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 179/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G+DR DRTGVGTRS FGYQMRF+L +GFPLLTTKK+H +S+++ELL Sbjct: 1 MKAYLDLLSHVLNNGTDRSDRTGVGTRSVFGYQMRFNLQEGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADKDG LGP+YG QWRSWP DG IDQIS+++ + Sbjct: 61 WFLKGDTNIAWLKEHGVSIWDEWADKDGNLGPVYGYQWRSWPSSDGRYIDQISNLLAMIN 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN ALID+MALPPCHCLFQF V NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPNSRRLIVTAWNPALIDEMALPPCHCLFQFQVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA QLSR+P LP + INP + DL Sbjct: 181 YALLTMMIAQVTGLKVGDFIHTLGDAHLYSNHFEQAKQQLSRTPGILPLIRINPKVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +YE I A V+V Sbjct: 241 SFQFEDFELLNYEAQPHIKAPVAV 264 >gi|161619346|ref|YP_001593233.1| thymidylate synthase [Brucella canis ATCC 23365] gi|189036928|sp|A9M657|TYSY_BRUC2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|161336157|gb|ABX62462.1| Thymidylate synthase [Brucella canis ATCC 23365] Length = 264 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 175/264 (66%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 61 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPQSRSLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264 >gi|209550125|ref|YP_002282042.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535881|gb|ACI55816.1| Thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 264 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 175/264 (66%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+ TTKK+H +S++HELL Sbjct: 1 MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLQEGFPVTTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGETNIGYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLGIPFNIAS Sbjct: 121 NNPNSRRHIVSAWNPAEVDQMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M INP++ D+ Sbjct: 181 YALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF ++DF L YE A+I A ++V Sbjct: 241 SFTFDDFELIGYEADASIKAPIAV 264 >gi|34496482|ref|NP_900697.1| thymidylate synthase [Chromobacterium violaceum ATCC 12472] gi|62901352|sp|Q7NZ95|TYSY_CHRVO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|34102336|gb|AAQ58702.1| thymidylate synthase [Chromobacterium violaceum ATCC 12472] Length = 264 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 175/264 (66%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV++ G D+ DRTG GTRS FGYQMRFDL+ GFPL+TTKK H +S++HELL Sbjct: 1 MQQYLDLMRHVLEHGHDKADRTGTGTRSVFGYQMRFDLAAGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQIS ++ ++ Sbjct: 61 WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQISQLLDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDQMALPPCHSLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q G+F+HTLGD HLY+NH EQA LQL+R PR LP M +NP + DL Sbjct: 181 YALLTMMVAQVCGLQPGDFVHTLGDAHLYSNHLEQARLQLTRDPRPLPTMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++DF L Y+PH I A+V+V Sbjct: 241 AFTFDDFALEGYDPHPHIKAQVAV 264 >gi|319782912|ref|YP_004142388.1| thymidylate synthase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168800|gb|ADV12338.1| thymidylate synthase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 264 Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust. Identities = 175/264 (66%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV+ G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL Sbjct: 1 MRQYLDLLQHVLDNGADRGDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL HGVSIWDEWAD++G+LGP+YG QWRSWPD G IDQI+++++ +R Sbjct: 61 WFLAGDTNIKYLTDHGVSIWDEWADENGDLGPVYGKQWRSWPDGHGGSIDQIANLLKEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++ MALPPCHCLFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSQGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA QL R+PRTLP M INP + DL Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLRRTPRTLPTMWINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L +Y A+I A ++V Sbjct: 241 AFRFEDFRLENYVADASIKAPIAV 264 >gi|239832277|ref|ZP_04680606.1| thymidylate synthase [Ochrobactrum intermedium LMG 3301] gi|239824544|gb|EEQ96112.1| thymidylate synthase [Ochrobactrum intermedium LMG 3301] Length = 307 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 174/264 (65%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRF+L +GFP+LTTKK+H +S++HELL Sbjct: 44 MRTYLDLLQHVLDNGVDRGDRTGTGTRSVFGYQMRFNLEEGFPVLTTKKLHLRSIIHELL 103 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 104 WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 163 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 164 GNPNSRRLIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 223 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HTLGD H+Y NHF+QA QL+R+P+ LPQM INP++ DL Sbjct: 224 YALLTMMIAQVTGLKPGEFVHTLGDAHIYANHFDQAREQLARTPKKLPQMWINPDVKDLF 283 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 284 AFRFEDFRLEGYEADPTIKAPIAV 307 >gi|86358403|ref|YP_470295.1| thymidylate synthase [Rhizobium etli CFN 42] gi|123724761|sp|Q2K6G8|TYSY_RHIEC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|86282505|gb|ABC91568.1| thymidylate synthase protein [Rhizobium etli CFN 42] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S+VHELL Sbjct: 1 MQQYLDLLAHVMEKGSDRGDRTGTGTRSVFGYQMRFDLGEGFPVLTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPNSRRHIVSAWNPAEVDQMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLKGGDFVHTLGDAHLYHNHFDQAKLQLTRRPKPLPFMRINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L YE A+I A ++V Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264 >gi|238021900|ref|ZP_04602326.1| hypothetical protein GCWU000324_01804 [Kingella oralis ATCC 51147] gi|237866514|gb|EEP67556.1| hypothetical protein GCWU000324_01804 [Kingella oralis ATCC 51147] Length = 264 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV++ G + DRTG GTRS FGYQMRFDLS+GFP LTTKK+H KS++HELL Sbjct: 1 MQQYLDLMRHVLQNGVTKSDRTGTGTRSVFGYQMRFDLSQGFPALTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G+LG +YG QWRSW +G IDQI ++VQ ++ Sbjct: 61 WFLSGDTNIRYLKENGVRIWDEWADENGDLGRVYGAQWRSWRGANGETIDQIRNLVQQIQ 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNPAEVDSMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMMLA V G Q GEFIHTLGD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLTMMLAQVCGLQAGEFIHTLGDAHLYLNHLEQAQLQLTREPRPLPKMHINPDVRDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR++DF L Y+PH I A+VSV Sbjct: 241 AFRFDDFELADYDPHPHIKAQVSV 264 >gi|325266347|ref|ZP_08133025.1| thymidylate synthase [Kingella denitrificans ATCC 33394] gi|324982140|gb|EGC17774.1| thymidylate synthase [Kingella denitrificans ATCC 33394] Length = 264 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 174/264 (65%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV+ G+D+ DRTG GTRS FGYQMRF+L+ GFP+LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLQHVLDNGTDKSDRTGTGTRSVFGYQMRFNLADGFPVLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G+LG +YG QWRSW DG +DQI+++V+ +R Sbjct: 61 WFLAGDTNIRYLKENGVRIWDEWADENGDLGRVYGAQWRSWRGADGETVDQIANVVRQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A +D MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QTPDSRRLIVSAWNPAEVDDMALPPCHALFQFYVANGQLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q GEF+HTLGD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLTMMVAQVCGLQAGEFVHTLGDAHLYQNHLEQARLQLTREPRALPKMHINPDVRDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+++DFTL Y+PH I A+VSV Sbjct: 241 AFKFDDFTLSDYDPHPHIKAEVSV 264 >gi|39936555|ref|NP_948831.1| thymidylate synthase [Rhodopseudomonas palustris CGA009] gi|62901322|sp|Q6N447|TYSY_RHOPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|39650411|emb|CAE28934.1| thymidylate synthase [Rhodopseudomonas palustris CGA009] Length = 264 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 216/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL ++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTK++ K++VHELL Sbjct: 1 MIQYQDLLERILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGGSIDQIANVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLMVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEF+HTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ Sbjct: 181 YALLTLMVAQVTGLKPGEFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDFTL Y+PH I A+V+V Sbjct: 241 GFRYEDFTLTGYDPHPHIKAEVAV 264 >gi|146342419|ref|YP_001207467.1| thymidylate synthase [Bradyrhizobium sp. ORS278] gi|166231693|sp|A4YZC4|TYSY_BRASO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|146195225|emb|CAL79250.1| Thymidylate synthase (TS) (TSase) [Bradyrhizobium sp. ORS278] Length = 264 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 216/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL ++ G+ + DRTG GT S FG+QMRF+L+ GFP++TTK++ K++VHELL Sbjct: 1 MHQYHDLLERILSDGAQKHDRTGTGTLSVFGHQMRFNLAAGFPMVTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQIS++V +R Sbjct: 61 WFLKGDTNIKYLHDHGVTIWDEWADANGDLGPVYGYQWRSWPTSDGGQIDQISNVVDMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+H+ GDVHLY+NH EQA LQLSR+PR LP M +NP++ D+ Sbjct: 181 YALLTMMVAQVTGLKLGEFVHSFGDVHLYSNHIEQARLQLSRTPRPLPTMTLNPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF L Y+PH I A+V+V Sbjct: 241 AFRYEDFALAGYDPHPHIKAEVAV 264 >gi|288927630|ref|ZP_06421477.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108] gi|288330464|gb|EFC69048.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108] Length = 264 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 174/264 (65%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ ++ G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYLDLLQRIVNEGTRKEDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSWP+Y+G +DQI IV +L+ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYNGGHVDQIQDIVNALK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+MALPPCHCLFQFYV NGKLS QLYQRS D FLG+PFNIAS Sbjct: 121 NNPDSRRMIVSAWNVAEVDQMALPPCHCLFQFYVANGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHT GD HLY NH EQA QL R+PRTLP+M+INPN+ + Sbjct: 181 YALLTMMMAQVSGLKPGDFIHTTGDTHLYLNHLEQAKEQLKRTPRTLPRMVINPNVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+Y+DFTL Y+P I A+VSV Sbjct: 241 DFKYDDFTLEGYDPLPHIKAEVSV 264 >gi|192292373|ref|YP_001992978.1| thymidylate synthase [Rhodopseudomonas palustris TIE-1] gi|192286122|gb|ACF02503.1| Thymidylate synthase [Rhodopseudomonas palustris TIE-1] Length = 264 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 216/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL ++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTK++ K++VHELL Sbjct: 1 MIQYQDLLERILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGGSIDQIANVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLMVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEF+HTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ Sbjct: 181 YALLTLMVAQVTGLKPGEFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTINPAVNDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDFTL Y+PH I A+V+V Sbjct: 241 GFRYEDFTLTGYDPHPHIKAEVAV 264 >gi|288801490|ref|ZP_06406942.1| thymidylate synthase [Prevotella sp. oral taxon 299 str. F0039] gi|288331571|gb|EFC70057.1| thymidylate synthase [Prevotella sp. oral taxon 299 str. F0039] Length = 264 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 174/264 (65%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H+I G+ + DRTG GT+S FGYQMRF+L GFPLLTTKK+H KS++HELL Sbjct: 1 MKAYLDLLQHIINNGATKGDRTGTGTKSVFGYQMRFNLEDGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSWP+Y G IDQI+ +V ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYKGGTIDQITQVVDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A +D+MALPPCHCLFQFYV N KLS QLYQRS D FLG+PFNIAS Sbjct: 121 NNPNSRRMIVTAWNPAEVDEMALPPCHCLFQFYVANNKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLL MM+A V G++ GEF++T GD HLY NH EQA LQL R+PRTLP+M INP++ D+ Sbjct: 181 YSLLLMMVAQVTGYEPGEFVYTTGDTHLYLNHLEQAQLQLQRTPRTLPKMRINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDFTL Y P+ I A+VSV Sbjct: 241 SFKYEDFTLEDYNPYDHIKAQVSV 264 >gi|224826342|ref|ZP_03699444.1| Thymidylate synthase [Lutiella nitroferrum 2002] gi|224601443|gb|EEG07624.1| Thymidylate synthase [Lutiella nitroferrum 2002] Length = 264 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 177/264 (67%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G + DRTG GT S FGYQMRFDL+ GFPLLTTKK+H KS+VHELL Sbjct: 1 MKQYLDLMRHVREHGHYKSDRTGTGTLSVFGYQMRFDLADGFPLLTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G LGP+YG QWRSWP DG +DQI+++V+ ++ Sbjct: 61 WFLSGDTNIRYLKENGVSIWDEWADENGNLGPVYGYQWRSWPAPDGRHVDQIANVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HTLGD HLY+NH EQAD QL+R PR LP M INP + DL Sbjct: 181 YALLTMMVAQVCGLKPGEFVHTLGDAHLYSNHLEQADEQLAREPRPLPVMKINPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L Y+P I AKV+V Sbjct: 241 AFRFEDFELEGYDPMPHIKAKVAV 264 >gi|13471483|ref|NP_103049.1| thymidylate synthase [Mesorhizobium loti MAFF303099] gi|22096229|sp|Q98KH9|TYSY_RHILO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|14022225|dbj|BAB48835.1| thymidylate synthase [Mesorhizobium loti MAFF303099] Length = 264 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV+ G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL Sbjct: 1 MRQYLDLLQHVLDNGADRSDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL HGV+IWDEWAD++G+LGP+YG QWRSWPD G IDQI+ +++ +R Sbjct: 61 WFLAGDTNIKYLTDHGVTIWDEWADENGDLGPVYGRQWRSWPDGHGGSIDQIAGLLKEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++ MALPPCHCLFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA QL R+PR LP M INP + DL Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLQRTPRALPTMWINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L +Y A+I A ++V Sbjct: 241 AFRFEDFRLENYVADASIQAPIAV 264 >gi|2258280|gb|AAC45469.1| thymidylate synthase [Neisseria gonorrhoeae] Length = 267 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 176/265 (66%), Positives = 213/265 (80%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GT S FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTLSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWD-EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 WFL+GD+N+ YL + VSIWD EWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G LSCQLYQRS D+FLG+PFNIA Sbjct: 123 KKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGNLSCQLYQRSADIFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 183 SYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDL 242 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 FAFKFEDFELEGYDPHPHIKAVVSV 267 >gi|20455513|sp|O33380|TYSY_NEIGO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 265 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 176/265 (66%), Positives = 213/265 (80%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GT S FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTLSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWD-EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 WFL+GD+N+ YL + VSIWD EWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQI 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G LSCQLYQRS D+FLG+PFNIA Sbjct: 121 KKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGNLSCQLYQRSADIFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 SYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDL 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 FAFKFEDFELEGYDPHPHIKAVVSV 265 >gi|49474436|ref|YP_032478.1| thymidylate synthase [Bartonella quintana str. Toulouse] gi|62901308|sp|Q6FZ91|TYSY_BARQU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|49239940|emb|CAF26342.1| Thymidylate synthase [Bartonella quintana str. Toulouse] Length = 264 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 180/264 (68%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRFDL GFPLLTTKK+H +S+++ELL Sbjct: 1 MKTYLDLLSHVLNKGIDRTDRTGVGTRSVFGYQMRFDLQIGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV++L HGVSIWDEWAD+ G LGPIYG QWRSWP DG IDQIS ++ ++ Sbjct: 61 WFLRGDTNVAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPASDGRYIDQISRLLTMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN ALI++MALPPCHC FQFYV + KLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KTPDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADDKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA QLSR P LP M+INP++ DL Sbjct: 181 YALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRIPNALPSMLINPSVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +YE I A V+V Sbjct: 241 SFKFEDFELLNYEAQPHIKAPVAV 264 >gi|319899133|ref|YP_004159226.1| Thymidylate synthase [Bartonella clarridgeiae 73] gi|319403097|emb|CBI76655.1| Thymidylate synthase [Bartonella clarridgeiae 73] Length = 264 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 180/264 (68%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+K G DR DRTGVGTRS FGYQMRF+L GFPLLTTKK+H +S+++ELL Sbjct: 1 MKAYLDLLFHVLKNGIDRLDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADK+G+LGPIYG QWRSWP DG IDQIS+++ ++ Sbjct: 61 WFLKGDTNIAWLKEHGVSIWDEWADKEGDLGPIYGYQWRSWPAPDGRHIDQISNLLTMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+MALPPCHCLFQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHCLFQFYVAAGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A + Q G+FIHT GD HLY NHFEQA+ QLSR+P LP M+INP + DL Sbjct: 181 YALLTMMIAQITNLQVGDFIHTFGDAHLYLNHFEQAEQQLSRTPSALPLMLINPAVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF +EDF L +YE I A V+V Sbjct: 241 SFTFEDFELLNYEALPHIKAPVAV 264 >gi|260911785|ref|ZP_05918357.1| thymidylate synthase [Prevotella sp. oral taxon 472 str. F0295] gi|260634111|gb|EEX52229.1| thymidylate synthase [Prevotella sp. oral taxon 472 str. F0295] Length = 264 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ ++ G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYLDLLQRIVNEGTRKEDRTGTGTLSVFGHQMRFNLQEGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSWP+Y+G IDQI SI+ +L+ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYNGGHIDQIQSIINALK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+MALPPCHCLFQFYV GKLS QLYQRS D FLG+PFNIAS Sbjct: 121 TNPDSRRMIVSAWNVAEVDQMALPPCHCLFQFYVAKGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q G+FIHT GD HLY NH EQA QL R+PR LP+M+INPN+ + Sbjct: 181 YALLTMMMAQVCGLQPGDFIHTTGDTHLYLNHLEQAKEQLKRTPRALPKMVINPNVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+Y++FTL Y+P I A+VSV Sbjct: 241 DFKYDNFTLEGYDPLPHIKAEVSV 264 >gi|241205506|ref|YP_002976602.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859396|gb|ACS57063.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 264 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M I P++ D+ Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L YE A+I A ++V Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264 >gi|116252999|ref|YP_768837.1| thymidylate synthase [Rhizobium leguminosarum bv. viciae 3841] gi|122988452|sp|Q1ME82|TYSY_RHIL3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|115257647|emb|CAK08744.1| putative thymidylate synthase [Rhizobium leguminosarum bv. viciae 3841] Length = 264 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNI+S Sbjct: 121 NNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNISS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V+G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M I P++ D+ Sbjct: 181 YALLTMMVAQVVGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L YE A+I A ++V Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264 >gi|291614975|ref|YP_003525132.1| thymidylate synthase [Sideroxydans lithotrophicus ES-1] gi|291585087|gb|ADE12745.1| thymidylate synthase [Sideroxydans lithotrophicus ES-1] Length = 264 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G+ + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL Sbjct: 1 MRQYLDLMQHVLEHGTKKSDRTGTGTTSVFGYQMRFDLSQGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N YL +GVSIWDEWAD+ G LGP+YG QWRSW DG VIDQI V+ +R Sbjct: 61 WFLQGSTNTKYLKDNGVSIWDEWADEQGNLGPVYGKQWRSWETVDGRVIDQIKVAVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G +YG+F+HT GD HLY+NH EQ QLSR PR LP M INP++ D+ Sbjct: 181 YALLTMMMAQVCGLKYGDFVHTFGDAHLYSNHMEQTATQLSREPRALPTMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL Y+PH AI A V+V Sbjct: 241 GFKFEDFTLEGYDPHPAIKAPVAV 264 >gi|260462156|ref|ZP_05810400.1| thymidylate synthase [Mesorhizobium opportunistum WSM2075] gi|259032016|gb|EEW33283.1| thymidylate synthase [Mesorhizobium opportunistum WSM2075] Length = 264 Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV++ G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL Sbjct: 1 MRQYLDLLQHVLENGADRGDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWPD G IDQI+++++ +R Sbjct: 61 WFLAGDTNIKYLTDNGVSIWDEWADENGDLGPVYGKQWRSWPDGHGGSIDQIANLLKEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++ MALPPCHC+FQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCMFQFYVSEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA QL R+PR LP M INP + DL Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLRRTPRALPTMWINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L +Y A+I A ++V Sbjct: 241 AFRFEDFRLENYVADASIKAPIAV 264 >gi|298370125|ref|ZP_06981441.1| thymidylate synthase [Neisseria sp. oral taxon 014 str. F0314] gi|298281585|gb|EFI23074.1| thymidylate synthase [Neisseria sp. oral taxon 014 str. F0314] Length = 264 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 174/264 (65%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G D+ DRTG GTRS FGYQMRFDLSKGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYHDLMRHVLEHGIDKSDRTGTGTRSVFGYQMRFDLSKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++ + ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVTEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHTMFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEFIHT GD HLY+NH EQA LQLSR R LP+M INP + DL Sbjct: 181 YALLTMMMAQVCRLKIGEFIHTFGDAHLYSNHMEQAKLQLSRDFRPLPEMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y PH I A+V+V Sbjct: 241 AFKFEDFELTGYNPHPHIKAEVAV 264 >gi|163868690|ref|YP_001609902.1| thymidylate synthase [Bartonella tribocorum CIP 105476] gi|189036927|sp|A9IW82|TYSY_BART1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|161018349|emb|CAK01907.1| Thymidylate synthase [Bartonella tribocorum CIP 105476] Length = 264 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 177/264 (67%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL HV+ G DR DRTGVGTRS FGYQMRFDL GFPLLTTKK+H +S+++ELL Sbjct: 1 MKSYLALLSHVLNQGIDRTDRTGVGTRSIFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADK G LGP+YG QWRSWP DG IDQI ++++ ++ Sbjct: 61 WFLKGDTNIAWLKEHGVSIWDEWADKQGNLGPVYGYQWRSWPAPDGRHIDQIDNLLRMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN ALI++MALPPCHCLFQFY+D GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 EKPDSRRLIVSAWNPALIEEMALPPCHCLFQFYIDEGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHT GD HLY+NHFEQA QLSR P LP M INP + DL Sbjct: 181 YALLTMMIAQVSGLKVGDFIHTFGDAHLYSNHFEQAQYQLSRIPNALPCMRINPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +YE H I A V++ Sbjct: 241 SFKFEDFELLNYEAHPHIKAPVAI 264 >gi|148257348|ref|YP_001241933.1| thymidylate synthase [Bradyrhizobium sp. BTAi1] gi|166231692|sp|A5EPD3|TYSY_BRASB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|146409521|gb|ABQ38027.1| thymidylate synthase [Bradyrhizobium sp. BTAi1] Length = 264 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL ++ G+++ DRTG GT S FG+QMRF+L GFPL+TTK++ K++VHELL Sbjct: 1 MHQYHDLLERILSDGAEKHDRTGTGTLSVFGHQMRFNLGAGFPLVTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI++++ ++ Sbjct: 61 WFLRGDTNIKYLHDHGVTIWDEWADANGDLGPVYGYQWRSWPTPDGGHIDQIANVIDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVVNGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+H+ GDVHLY+NH EQA LQL+R+PR+LP M +NP++ D+ Sbjct: 181 YALLTMMVAQVTGLKPGEFVHSFGDVHLYSNHVEQARLQLTRAPRSLPTMTLNPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF L Y+PH I A+V+V Sbjct: 241 AFRYEDFALAGYDPHPHIKAEVAV 264 >gi|332970396|gb|EGK09388.1| thymidylate synthase [Kingella kingae ATCC 23330] Length = 264 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++HV+ G+D+ DRTG GTRS FGYQMRF+L+ GFP+LTTKK+H KS++HELL Sbjct: 1 MKPYLDLMQHVLAHGNDKSDRTGTGTRSVFGYQMRFNLADGFPVLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IWDEWAD++G LG +YG QWRSW +G IDQI+++V+ ++ Sbjct: 61 WFLQGDTNIRYLQENGVKIWDEWADENGNLGRVYGAQWRSWRGANGETIDQIANLVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPAEVDDMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMMLA V G Q GEF+HTLGD HLY NH EQA LQLSR PR+LP+M INPN+ D+ Sbjct: 181 YALLTMMLAQVCGLQAGEFVHTLGDAHLYRNHLEQAQLQLSREPRSLPKMRINPNVQDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++DF L Y+PH I A VSV Sbjct: 241 AFTFDDFELVDYDPHPHIKADVSV 264 >gi|315022907|gb|EFT35930.1| Thymidylate synthase [Riemerella anatipestifer RA-YM] gi|325336455|gb|ADZ12729.1| Thymidylate synthase [Riemerella anatipestifer RA-GD] Length = 264 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL Sbjct: 1 MQNYLDLLQHILDHGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ +GVSIWDEWAD +G LGP+YG QWRSW +G VIDQIS ++ ++ Sbjct: 61 WFLKGDTNIKYLNDNGVSIWDEWADDNGNLGPVYGAQWRSWKGANGKVIDQISEVIHQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A I MAL PCH LFQFYV +G+LS QLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNAAEIPNMALAPCHALFQFYVADGRLSLQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q GE+IH+ GDVH+YNNHFEQ QLSR PR LP M +NP++ DL Sbjct: 181 YTLLTMMVAQVCGLQVGEYIHSFGDVHIYNNHFEQVQKQLSREPRPLPTMKLNPSVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +Y PH+ I A V+V Sbjct: 241 DFKFEDFTLENYHPHSGIKAPVAV 264 >gi|313206101|ref|YP_004045278.1| thymidylate synthase [Riemerella anatipestifer DSM 15868] gi|312445417|gb|ADQ81772.1| thymidylate synthase [Riemerella anatipestifer DSM 15868] Length = 264 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL Sbjct: 1 MQNYLDLLQHILDHGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ +GVSIWDEWAD +G LGP+YG QWRSW +G VIDQIS ++ ++ Sbjct: 61 WFLKGDTNIKYLNDNGVSIWDEWADDNGNLGPVYGAQWRSWKGANGKVIDQISEVIHQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A I MAL PCH LFQFYV +G+LS QLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNAAEIPNMALAPCHALFQFYVADGRLSLQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q GE+IH+ GDVH+YNNHFEQ QLSR PR LP M +NP++ DL Sbjct: 181 YALLTMMVAQVCGLQVGEYIHSFGDVHIYNNHFEQVQKQLSREPRPLPTMKLNPSVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +Y PH+ I A V+V Sbjct: 241 DFKFEDFTLENYHPHSGIKAPVAV 264 >gi|255531326|ref|YP_003091698.1| thymidylate synthase [Pedobacter heparinus DSM 2366] gi|255344310|gb|ACU03636.1| thymidylate synthase [Pedobacter heparinus DSM 2366] Length = 264 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+ + DRTG GT S FGYQMRF+L +GFP++TTKK+H KS++HEL+ Sbjct: 1 MKQYLDLMQHVLDHGTQKHDRTGTGTISVFGYQMRFNLQEGFPMVTTKKLHLKSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G+LGP+YG QWRSWP G IDQI+ IV +++ Sbjct: 61 WFLSGDTNIKYLKDNGVKIWDEWADENGDLGPVYGSQWRSWPKPGGGHIDQIAQIVNTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVAEVENMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G YG+FIHTLGD HLYNNH EQ LQLSR PR LP M INP I D+ Sbjct: 181 YALLTMMVAQVCGLAYGDFIHTLGDAHLYNNHIEQTRLQLSREPRKLPVMEINPEIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF YEDFTL+ Y+PH I V+V Sbjct: 241 SFSYEDFTLKDYDPHPHIKGAVAV 264 >gi|91977820|ref|YP_570479.1| thymidylate synthase [Rhodopseudomonas palustris BisB5] gi|123735257|sp|Q134B1|TYSY_RHOPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91684276|gb|ABE40578.1| thymidylate synthase [Rhodopseudomonas palustris BisB5] Length = 264 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL ++ G+++ DRTG GT S FG+QMRF+L+ GFP+LTTK++ K++VHELL Sbjct: 1 MIQYHDLLERILSDGTEKHDRTGTGTLSVFGHQMRFNLAAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI++IV+ ++ Sbjct: 61 WFLQGDTNIKYLRDNGVTIWDEWADANGDLGPVYGAQWRSWPAADGRSIDQIANIVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A +D+MALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPADVDRMALPPCHCLFQFYVAGGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD HLY+NH EQA LQL+R+PR LP+M+I+P + D+ Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHLYSNHLEQARLQLTRAPRALPEMVIDPAVKDVF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDFTL+ Y+PH I A+V+V Sbjct: 241 GFRYEDFTLQGYDPHPHIKAEVAV 264 >gi|225024585|ref|ZP_03713777.1| hypothetical protein EIKCOROL_01462 [Eikenella corrodens ATCC 23834] gi|224942647|gb|EEG23856.1| hypothetical protein EIKCOROL_01462 [Eikenella corrodens ATCC 23834] Length = 257 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 169/257 (65%), Positives = 214/257 (83%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 ++H++ G+D+ DRTG GTRS FG+QMRFDL++GFPLLTTKK+H +S++HELLWFL+GD+ Sbjct: 1 MQHILSHGTDKSDRTGTGTRSVFGHQMRFDLAQGFPLLTTKKLHLRSIIHELLWFLKGDT 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ +P SRR Sbjct: 61 NIRYLKENNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIKRNPDSRR 120 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 IVSAWN AL+D+MALPPCH LFQFYV G+LSCQLYQRS DVFLG+PFNIASY+LLTMM Sbjct: 121 LIVSAWNPALVDEMALPPCHALFQFYVAEGRLSCQLYQRSADVFLGVPFNIASYALLTMM 180 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A V G GEFIHT GD HLY+NHFEQA LQL+R PR LPQM +NP + +L FR+EDF Sbjct: 181 MAQVCGLAPGEFIHTFGDAHLYSNHFEQARLQLTREPRALPQMQLNPEVQNLFDFRFEDF 240 Query: 248 TLRSYEPHAAILAKVSV 264 L++Y+PH I A+V+V Sbjct: 241 ELQNYDPHPHIKAQVAV 257 >gi|86749158|ref|YP_485654.1| thymidylate synthase [Rhodopseudomonas palustris HaA2] gi|123408309|sp|Q2IYG7|TYSY_RHOP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|86572186|gb|ABD06743.1| thymidylate synthase [Rhodopseudomonas palustris HaA2] Length = 264 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G+++ DRTG GT S FG+Q+RFDL+ GFP+LTTK++ K+++HELL Sbjct: 1 MIPYHDLLERILSDGAEKHDRTGTGTLSVFGHQLRFDLAAGFPMLTTKRLPLKAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI+ +V +R Sbjct: 61 WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGRSIDQIAHVVDMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A ++KMALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLKPGDFIHTLGDAHLYSNHLEQARLQLTRAPRALPAMAINPAVTDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDFTL Y+PH I A+V+V Sbjct: 241 GFRYEDFTLHGYDPHPHIKAEVAV 264 >gi|319651224|ref|ZP_08005354.1| thymidylate synthase [Bacillus sp. 2_A_57_CT2] gi|317397004|gb|EFV77712.1| thymidylate synthase [Bacillus sp. 2_A_57_CT2] Length = 264 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL +HV++ G+ + DRTG GT STFGYQMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLCKHVLENGTKKEDRTGTGTISTFGYQMRFNLQEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW+EWAD++G LGP+YG QWRSW DGN +DQISS++ ++ Sbjct: 61 WFLNGDTNVKYLQENGVRIWNEWADEEGNLGPVYGHQWRSWTGADGNTVDQISSLIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN I+KMALPPCHC+FQFY +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVNAWNAGEIEKMALPPCHCMFQFYAADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEF+HT GDVH+Y NH +Q +LQLSR PR LP+MIINP++ D+ Sbjct: 181 YALLTMMVAQVCDLEPGEFVHTFGDVHIYQNHIDQVNLQLSRDPRPLPKMIINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+++DF L Y PH I VSV Sbjct: 241 SFKFDDFQLEDYNPHPHIKGVVSV 264 >gi|90424757|ref|YP_533127.1| thymidylate synthase [Rhodopseudomonas palustris BisB18] gi|123394889|sp|Q211X8|TYSY_RHOPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|90106771|gb|ABD88808.1| thymidylate synthase [Rhodopseudomonas palustris BisB18] Length = 264 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+QY DLL+ ++ G+++ DRTG GT S FG+QMRF L GFP+LTTK++ K++VHELL Sbjct: 1 MNQYHDLLQRILGEGAEKHDRTGTGTLSVFGHQMRFALDAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+ +V+ ++ Sbjct: 61 WFLKGDTNIKYLKDHGVSIWDEWADENGDLGPVYGSQWRSWPAADGRSIDQIADVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A ID+MALPPCHCLFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPAEIDQMALPPCHCLFQFYVARGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLKPGEFIHTLGDAHLYSNHLEQARLQLTRTPRDLPVMTINPQVTDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDFTL +Y+PH I A+V+V Sbjct: 241 GFRFEDFTLHNYDPHPHIKAEVAV 264 >gi|307945915|ref|ZP_07661251.1| thymidylate synthase [Roseibium sp. TrichSKD4] gi|307771788|gb|EFO31013.1| thymidylate synthase [Roseibium sp. TrichSKD4] Length = 264 Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G DR DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYLDLMQKVLDEGVDRGDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IWD+WAD++GELGP+YG QWRSWP DG IDQI +++ ++ Sbjct: 61 WFLSGDTNVRYLQENGVKIWDDWADENGELGPVYGYQWRSWPAPDGRSIDQIENLLTMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ANPESRRLIVSAWNPALVDEMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+H+ GD H+Y+NHF+Q QL R+PR LP M +NPN+ DL Sbjct: 181 YALLTMMIAQVTGLKSGDFVHSFGDAHIYHNHFDQVREQLIRTPRALPTMTLNPNVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+YEDF L Y PH I A ++V Sbjct: 241 AFKYEDFELTDYNPHPHIKAPIAV 264 >gi|149279349|ref|ZP_01885480.1| thymidylate synthetase [Pedobacter sp. BAL39] gi|149229875|gb|EDM35263.1| thymidylate synthetase [Pedobacter sp. BAL39] Length = 264 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+ + DRTG GT S FGYQMRF+L +GFP++TTKK+H KS++HEL+ Sbjct: 1 MKQYLDLMQHVLDHGTQKHDRTGTGTISVFGYQMRFNLQEGFPMVTTKKLHLKSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G LGP+YG QWRSWP DG IDQIS IV +++ Sbjct: 61 WFLSGDTNIKYLKDNGVKIWDEWADENGNLGPVYGSQWRSWPTPDGRHIDQISQIVNTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I++MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVADIEEMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G +YG+FIHT GD HLYNNH EQA LQLSR R LP M INP + +LL Sbjct: 181 YALLTMMVAQVCGLEYGDFIHTFGDAHLYNNHIEQAKLQLSRDIRPLPVMEINPEVKNLL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL+ Y+PH I V+V Sbjct: 241 DFKFEDFTLKGYDPHPHIKGAVAV 264 >gi|110634102|ref|YP_674310.1| thymidylate synthase [Mesorhizobium sp. BNC1] gi|122965941|sp|Q11HI0|TYSY_MESSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|110285086|gb|ABG63145.1| thymidylate synthase [Chelativorans sp. BNC1] Length = 264 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ G DR DRTG GTR FGYQMRFDLS GFP+LTTKK+H +S+++ELL Sbjct: 1 MRQYLDLLAHVLENGIDREDRTGTGTRGVFGYQMRFDLSDGFPVLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ LR Sbjct: 61 WFLKGDTNIRYLQENGVTIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIANLLNGLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +PYSRRHIV+AWN A ID MALPPCHCLFQF+V G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ENPYSRRHIVTAWNPAEIDGMALPPCHCLFQFHVAEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY NHF+QA QL+R+P+ LP M INP + DL Sbjct: 181 YALLTMMIAQVTGLKPGDFVHTLGDAHLYKNHFDQAREQLTRTPKPLPTMWINPEVDDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F YEDF L Y I A ++V Sbjct: 241 AFGYEDFRLEGYVADPTIRAPIAV 264 >gi|240850869|ref|YP_002972269.1| thymidylate synthase ThyA [Bartonella grahamii as4aup] gi|240267992|gb|ACS51580.1| thymidylate synthase ThyA [Bartonella grahamii as4aup] Length = 264 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 179/264 (67%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRFDL GFPLLTTKK+H +S+++ELL Sbjct: 1 MKIYLDLLSHVLNNGIDRTDRTGVGTRSIFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+++L HGVSIWDEWAD+ G LGPIYG QWRSWP DG IDQIS ++ ++ Sbjct: 61 WFLRGDTNIAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPAPDGRHIDQISHLLTMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN ALI++MALPPCHC FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ETPDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA QLSR P LP M+IN + DL Sbjct: 181 YALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRIPNALPLMLINSAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +YE I A V+V Sbjct: 241 SFKFEDFELLNYEAQPHIKAPVAV 264 >gi|319407478|emb|CBI81128.1| Thymidylate synthase [Bartonella sp. 1-1C] Length = 264 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 177/264 (67%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRF+L GFPLLTTKK+H +S+++ELL Sbjct: 1 MKAYLDLLFHVLNDGIDRFDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADK G+LGPIYG QWRSWP DG IDQI +++ ++ Sbjct: 61 WFLKGDTNITWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTPDGRHIDQIKNLLAMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +PYSRR IVSAWN A I++MALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPYSRRLIVSAWNPAAIEEMALPPCHCLFQFYVAAGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A + Q G+FIHTLGD HLY NHFEQA+ QLSR+P+ LP M+INP + +L Sbjct: 181 YALLTMMIAQINHLQVGDFIHTLGDAHLYLNHFEQAEQQLSRTPKALPTMLINPEVKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF ++DF L +YE I A V+V Sbjct: 241 SFTFKDFELLNYEAFPHIKAPVAV 264 >gi|253996898|ref|YP_003048962.1| thymidylate synthase [Methylotenera mobilis JLW8] gi|253983577|gb|ACT48435.1| thymidylate synthase [Methylotenera mobilis JLW8] Length = 264 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+DL++HV + G+ + DRTG GT S FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYIDLVQHVFEHGNKKEDRTGTGTVSVFGYQMRFNLAEGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV IWDEWAD++G LGP+YG QWR+WP DG+ IDQI+ +V S++ Sbjct: 61 WFLQGSTNIAYLKENGVRIWDEWADENGNLGPVYGYQWRNWPKPDGSHIDQIAQVVNSIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+M LPPCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y+NHFEQ QL R PR LP M INP + D+ Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYSNHFEQMHEQLQRDPRPLPTMRINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDFTL Y+PH I +V+V Sbjct: 241 SFKFEDFTLEGYDPHPPIKGQVAV 264 >gi|261416896|ref|YP_003250579.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373352|gb|ACX76097.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327357|gb|ADL26558.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 270 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 175/270 (64%), Positives = 217/270 (80%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ +I G DR DRTG GTRS FG Q RFDLSKGFP LTTKK+H +S++HELL Sbjct: 1 MQQYLDLLKDIIDNGVDRSDRTGTGTRSVFGRQTRFDLSKGFPCLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH + V+IWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ SL+ Sbjct: 61 WFLKGDTNIKYLHDNKVTIWDEWADENGDLGPVYGHQWRSWPTPDGGHIDQIANLINSLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGI 174 +P SRRH+V AWNVA +DKMALPPCHCLFQFYV KLSCQLYQRS D+FLG+ Sbjct: 121 NNPDSRRHLVCAWNVAEVDKMALPPCHCLFQFYVGGVGASGKRKLSCQLYQRSADMFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASYSLLTMMLA V G++ GEF+HT GD+HLY+NHF+QA QLSR+PR LP M +NP Sbjct: 181 PFNIASYSLLTMMLAQVCGYEAGEFVHTFGDLHLYSNHFDQAREQLSRTPRALPTMKMNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ DL +F++EDF L +Y+P I A ++V Sbjct: 241 DVKDLFNFKFEDFELVNYDPWPTIKAPIAV 270 >gi|254503707|ref|ZP_05115858.1| thymidylate synthase [Labrenzia alexandrii DFL-11] gi|222439778|gb|EEE46457.1| thymidylate synthase [Labrenzia alexandrii DFL-11] Length = 268 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 173/268 (64%), Positives = 216/268 (80%), Gaps = 4/268 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL +++ G DR DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYHDLLSKILEDGIDRGDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIV 116 WF+ GD+N++YL HGV IWD+WAD++G+LGP+YG QWRSWP D G IDQIS+++ Sbjct: 61 WFVAGDTNIAYLKEHGVKIWDDWADENGDLGPVYGYQWRSWPAPYRDGSGQSIDQISNVL 120 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 + +R P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PF Sbjct: 121 EMIRKSPESRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADVFLGVPF 180 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 NIASY+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA QL+R+PR LP+M INP + Sbjct: 181 NIASYALLTMMIAQVTGLKPGDFVHTLGDAHLYSNHFDQAREQLTRAPRALPEMKINPAV 240 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 DL +F YEDF L Y+PH I A ++V Sbjct: 241 TDLFAFTYEDFELTGYDPHPHIAAPIAV 268 >gi|319404485|emb|CBI78092.1| Thymidylate synthase [Bartonella rochalimae ATCC BAA-1498] Length = 264 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 174/264 (65%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRF+L GFPLLTTKK+H +S+++ELL Sbjct: 1 MKAYLDLLFHVLNNGIDRFDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADK G+LGPIYG QWRSWP DG IDQI +++ ++ Sbjct: 61 WFLKGDTNITWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTSDGRHIDQIKNLLAMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DPYSRR +VSAWN A I++MALPPCHCLFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KDPYSRRLVVSAWNPAAIEEMALPPCHCLFQFYVAAGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A + Q G+FIHT+GD HLY NHFEQA QLSR+P+ LP M+INP + +L Sbjct: 181 YALLTMMIAQINHLQVGDFIHTIGDAHLYLNHFEQAKQQLSRTPKALPTMLINPEVKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+++DF L +YE I A V+V Sbjct: 241 SFKFKDFELLNYEAFPHIKAPVAV 264 >gi|114706847|ref|ZP_01439747.1| thymidylate synthase [Fulvimarina pelagi HTCC2506] gi|114537795|gb|EAU40919.1| thymidylate synthase [Fulvimarina pelagi HTCC2506] Length = 264 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+DR DRTG GTRS FG+QMRFDL +GFPLLTTK++H +S+VHELL Sbjct: 1 MRQYLDLLARVLGEGTDRPDRTGTGTRSVFGHQMRFDLGEGFPLLTTKRLHIRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV IWDEWAD++G+LGP+YG QWRSWPDYDG IDQIS ++ +LR Sbjct: 61 WFLKGDTNIAYLKANGVRIWDEWADENGDLGPVYGAQWRSWPDYDGGTIDQISGVLDTLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P+SRR IVSAWN AL+D MALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPHSRRLIVSAWNPALVDTMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY +H EQA LQL R+P LP + +NP++ DL Sbjct: 181 YALLTHMIAQASGLDVGDFVHTLGDAHLYADHLEQARLQLDRTPGPLPVLKLNPDVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F + D + +YE I A +SV Sbjct: 241 AFTFADVAIENYEAQPHIAAPISV 264 >gi|27381623|ref|NP_773152.1| thymidylate synthase [Bradyrhizobium japonicum USDA 110] gi|62901370|sp|Q89G35|TYSY_BRAJA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|27354791|dbj|BAC51777.1| thymidylate synthase [Bradyrhizobium japonicum USDA 110] Length = 264 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL ++ G+++ DRTG GT S FG+QMRF+LS GFP+LTTK++ K++VHELL Sbjct: 1 MHQYQDLLERILSDGAEKTDRTGTGTLSVFGHQMRFNLSAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI+++V ++ Sbjct: 61 WFLKGDTNIKYLRDNGVTIWDEWADANGDLGPVYGHQWRSWPAPDGRSIDQIANVVDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +DKMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+H+ GD HLY+NH EQA LQL+R+PR LP M INP++ D+ Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSFGDTHLYSNHLEQAKLQLTRAPRALPVMRINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFR+EDF L Y+PH I A+V+V Sbjct: 241 SFRFEDFELVGYDPHPHIKAEVAV 264 >gi|226357353|ref|YP_002787093.1| thymidylate synthase [Deinococcus deserti VCD115] gi|259550769|sp|C1D070|TYSY_DEIDV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226319343|gb|ACO47339.1| putative thymidylate synthase [Deinococcus deserti VCD115] Length = 264 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV++ G+++ DRTG GT S FG+QMRFDL +GFPL+TTK+ H KS++HELL Sbjct: 1 MQQYLDFMRHVLEHGTEKTDRTGTGTLSVFGHQMRFDLQEGFPLVTTKRTHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G SNV+YL HGV+IWDEWAD DGELGP+YGVQWRSWP DG IDQI+ +V+ +R Sbjct: 61 WFLQGSSNVAYLREHGVTIWDEWADPDGELGPVYGVQWRSWPTPDGRHIDQIAQVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV I++MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RTPDSRRLIVSAWNVGEIEQMALPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEFI T GD HLY NH EQA QL+R PRTLP M +NP++ +L Sbjct: 181 YALLTLMVAQVTGLKPGEFIWTGGDCHLYTNHLEQARKQLTREPRTLPVMRLNPDVRELD 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDFTL Y+PH I A V+V Sbjct: 241 GFRFEDFTLEGYDPHPGIKAPVAV 264 >gi|297564578|ref|YP_003683550.1| thymidylate synthase [Meiothermus silvanus DSM 9946] gi|296849027|gb|ADH62042.1| thymidylate synthase [Meiothermus silvanus DSM 9946] Length = 264 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y +L+R+V++ G + DRTGVGTRS FGYQMRFDL +GFPL+TTKKVHWKSVV+ELL Sbjct: 1 MQAYHELMRYVLEHGVPKSDRTGVGTRSIFGYQMRFDLQEGFPLVTTKKVHWKSVVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL HGVSIWDEWAD+ GELGPIYG QWRSW G +DQI+ ++Q +R Sbjct: 61 WFLRGDTNIRYLKEHGVSIWDEWADESGELGPIYGKQWRSWEGPGGKTVDQIAWVLQEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + KMAL PCH LFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRMVVSAWNVADLPKMALAPCHTLFQFYVSGGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEFIHTLGD HLYNNH EQA +QL+R PR LP + +NP + DL Sbjct: 181 YALLTLMIAHVSGLEPGEFIHTLGDAHLYNNHLEQARIQLAREPRPLPTVRLNPGLRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYED L Y PH I A V+V Sbjct: 241 AFRYEDIVLEGYHPHPPIPAPVAV 264 >gi|56964719|ref|YP_176450.1| thymidylate synthase [Bacillus clausii KSM-K16] gi|62901226|sp|Q5WDS1|TYSY_BACSK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|56910962|dbj|BAD65489.1| thymidylate synthase [Bacillus clausii KSM-K16] Length = 264 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L HV++ GS + DRTG GT S FGYQMRFDL KGFP++TTKK+H +S++HELL Sbjct: 1 MEQYLQLCEHVLQNGSPKSDRTGTGTISVFGYQMRFDLEKGFPIVTTKKLHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD++G+LGP+YG QWRSW +G +DQI+ +V+ ++ Sbjct: 61 WFLKGDTNIRYLQENGVRIWNEWADENGDLGPVYGKQWRSWEGANGKTVDQITEVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNVA I++MAL PCHCLFQFYV++GKLSCQLYQRS D+FLG+PFNI+S Sbjct: 121 TNPNSRRLIVNAWNVAEIEEMALAPCHCLFQFYVNDGKLSCQLYQRSADIFLGVPFNISS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLYNNH EQ LQL+R P+ LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLKPGEFIHTFGDAHLYNNHIEQTKLQLTRKPKQLPTMHINPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F Y+DF L+ Y+P+ I A+VSV Sbjct: 241 AFTYDDFELKHYDPYPHIKAEVSV 264 >gi|149196226|ref|ZP_01873281.1| thymidylate synthase [Lentisphaera araneosa HTCC2155] gi|149140487|gb|EDM28885.1| thymidylate synthase [Lentisphaera araneosa HTCC2155] Length = 264 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HVIK G D+ DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLLDHVIKNGVDKSDRTGTGTRSVFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G LGP+YG QWRSW DG IDQI+ ++++++ Sbjct: 61 WFLTGDTNIKYLKDNGVSIWDEWADEEGNLGPVYGYQWRSWKTPDGRTIDQIAQLIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV+ +D MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TKPDSRRLIVSAWNVSDVDNMALPPCHSLFQFYVADNKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V +YG+F+HT GD H+Y+NHFEQA LQLSR R LP M INP++ D+ Sbjct: 181 YALLTMMVAQVCDLEYGDFVHTFGDAHIYSNHFEQAKLQLSRDTRPLPTMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF +EDFTL Y+PH I A V++ Sbjct: 241 SFTFEDFTLEGYDPHPHIKAPVAI 264 >gi|325283967|ref|YP_004256508.1| Thymidylate synthase [Deinococcus proteolyticus MRP] gi|324315776|gb|ADY26891.1| Thymidylate synthase [Deinococcus proteolyticus MRP] Length = 264 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L H+++ G+D+ DRTG GTRS FGYQMRFDL +GFPL+TTK+VH KSV++ELL Sbjct: 1 MRQYLDYLSHIMEHGTDKADRTGTGTRSVFGYQMRFDLQQGFPLVTTKRVHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG+SNV +L HGV+IWDEWA + G+LGP+YGVQWRSWPDY G IDQI+ +++ ++ Sbjct: 61 WFLRGESNVGWLQDHGVTIWDEWAREGGKLGPVYGVQWRSWPDYGGGQIDQIAQVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA + +MALPPCH LFQFYV +G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 QNPDSRRLIVSAWNVAQVGEMALPPCHLLFQFYVADGRLSCQLYQRSADSFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEF+ T GD H+Y+NHFEQ + QL R PR LP+M +NP + D+ Sbjct: 181 YALLTMMVAQVCDLEPGEFVWTGGDCHVYHNHFEQVERQLKREPRPLPKMHLNPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDFTL Y+PH I A+V+V Sbjct: 241 AFRYEDFTLEGYDPHPGIKAEVAV 264 >gi|229496508|ref|ZP_04390222.1| thymidylate synthase [Porphyromonas endodontalis ATCC 35406] gi|229316405|gb|EEN82324.1| thymidylate synthase [Porphyromonas endodontalis ATCC 35406] Length = 265 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 176/265 (66%), Positives = 210/265 (79%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+ ++ G+ R DRTG GT+S FG+QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MRQYLELLQKIMDEGTLRSDRTGTGTKSIFGHQMRFDLEDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD-GNVIDQISSIVQSL 119 WFLRGDSNV+YL HGVSIWDEWAD +G LGPIYGVQWRSWP Y+ G DQI+ +V+ + Sbjct: 61 WFLRGDSNVAYLQEHGVSIWDEWADPEGNLGPIYGVQWRSWPSYNQGEAYDQIAQVVEDI 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWNVA ID+MALPPCHCL QFYV NG+LS QLYQRSGDVFLG+PFNIA Sbjct: 121 RTSPDSRRLMVSAWNVAQIDQMALPPCHCLMQFYVANGRLSLQLYQRSGDVFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LL MM+A V G + G F+HTLGD HLY NH EQ LQL+RSPRTLP M +NP + +L Sbjct: 181 SYALLLMMVAQVTGLKPGTFVHTLGDAHLYCNHLEQTALQLTRSPRTLPTMQLNPEVRNL 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y PH I A ++V Sbjct: 241 EDFKFEDFKLLDYTPHPHIAAPIAV 265 >gi|319405984|emb|CBI79616.1| Thymidylate synthase [Bartonella sp. AR 15-3] Length = 264 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRF+L GFPLLTTKK+H +S+++ELL Sbjct: 1 MKAYLDLLFHVLNNGIDRLDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADK G+LGPIYG QWRSWP DG IDQI +++ ++ Sbjct: 61 WFLKGDTNIAWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTPDGRNIDQIKNLLAMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A I++MALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QNPDSRRLIVSAWNPAAIEEMALPPCHCLFQFYVAAGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A + Q G+FIHTLGD HLY NHFEQA+ QLSR+P+ LP M+INP + +L Sbjct: 181 YALLTMMIAQITHLQVGDFIHTLGDAHLYLNHFEQAEQQLSRTPKALPSMLINPEVKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF ++DF L +YE I A V+V Sbjct: 241 SFTFKDFELLNYEAFPHIKAPVAV 264 >gi|328542989|ref|YP_004303098.1| dihydrofolate reductase-thymidylate synthase-like protein [polymorphum gilvum SL003B-26A1] gi|326412735|gb|ADZ69798.1| putative dihydrofolate reductase-thymidylate synthase, putative-like protein [Polymorphum gilvum SL003B-26A1] Length = 322 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 171/268 (63%), Positives = 210/268 (78%), Gaps = 4/268 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 + QYLDL++ ++ G+DR DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H KS++HELL Sbjct: 55 VQQYLDLMQKILDEGTDRGDRTGTGTRSIFGHQMRFDLAAGFPLVTTKKLHLKSIIHELL 114 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIV 116 WFL GD+N+ YL+RHGV IWD+WAD+ GELGP+YG QWRSWP + G IDQI++++ Sbjct: 115 WFLAGDTNIGYLNRHGVKIWDDWADEHGELGPVYGAQWRSWPAPTPEDGGRTIDQIATVL 174 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 + +R P SRR IVSAWN AL+D MALPPCH LFQFYV G+LSCQLYQRS DVFLG+PF Sbjct: 175 RMIRETPESRRLIVSAWNPALVDAMALPPCHALFQFYVAEGRLSCQLYQRSADVFLGVPF 234 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 NIASY+LLTMM+A V G + G F+HT GD HLY NHF QA QL+R PR LP M +NP + Sbjct: 235 NIASYALLTMMVAQVTGLKPGHFVHTFGDAHLYANHFAQAREQLTREPRPLPTMTLNPAV 294 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 DL +F YEDFTL Y+PH I A ++V Sbjct: 295 TDLFAFTYEDFTLSGYDPHPHIKAPIAV 322 >gi|74318058|ref|YP_315798.1| thymidylate synthase [Thiobacillus denitrificans ATCC 25259] gi|123759029|sp|Q3SH96|TYSY_THIDA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|74057553|gb|AAZ97993.1| thymidylate synthase [Thiobacillus denitrificans ATCC 25259] Length = 264 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV++ G+ + DRTG GT S FG+Q R+DL+ GFPL+TTKK H +S+VHELL Sbjct: 1 MKPYLDLMRHVLEHGTRKDDRTGTGTLSVFGWQTRYDLAAGFPLVTTKKCHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG VIDQI+ V++LR Sbjct: 61 WFLQGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRSWPKADGGVIDQIAEAVKTLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+MAL PCH FQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRIIVSAWNVADLDRMALAPCHAFFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+HTLGD HLY NH EQA QLSR PR LP M +NP++ D+ Sbjct: 181 YALLTLMMAQVTGLKPGDFVHTLGDAHLYVNHLEQAREQLSREPRPLPTMTLNPDVTDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDFTL Y+PH AI A V+V Sbjct: 241 GFRFEDFTLGGYDPHPAIKAPVAV 264 >gi|49475832|ref|YP_033873.1| thymidylate synthase [Bartonella henselae str. Houston-1] gi|62901309|sp|Q6G2S8|TYSY_BARHE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|49238640|emb|CAF27884.1| Thymidylate synthase [Bartonella henselae str. Houston-1] Length = 264 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRFDL GFPLLTTKK+H +S+++ELL Sbjct: 1 MKTYLDLLSHVLNKGIDRTDRTGVGTRSVFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+++L HGVSIWDEWAD+ G LGPIYG QWRSWP DG IDQIS+++ ++ Sbjct: 61 WFLRGDTNIAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPAPDGRHIDQISNLLMMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A I +MALPPCHC FQFYV +GKLSCQLYQRS D+FLGIPFNIAS Sbjct: 121 KTPDSRRLIVSAWNPASIKEMALPPCHCFFQFYVADGKLSCQLYQRSADIFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA QLSR P LP M INP + DL Sbjct: 181 YALLTMMIAQVSGLKVGDFIHTLGDAHLYSNHFEQAQHQLSRIPNALPFMRINPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +Y+ I A ++V Sbjct: 241 SFKFEDFELLNYDAQPHIKAPIAV 264 >gi|253998589|ref|YP_003050652.1| thymidylate synthase [Methylovorus sp. SIP3-4] gi|253985268|gb|ACT50125.1| thymidylate synthase [Methylovorus sp. SIP3-4] Length = 264 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 168/264 (63%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G + DRTG GT S FGYQMRFDL+ GFPLLTTKKVH KS++HELL Sbjct: 1 MQTYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAAGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV+IWDEWAD +G LGP+YG QWR+WP DG+ IDQI+ +V++++ Sbjct: 61 WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGSHIDQITQVVEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ QLSR+PR+LP M INP++ D+ Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYLNHMEQVKEQLSRTPRSLPTMQINPDVRDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF+L++Y+P+ I A V+V Sbjct: 241 AFRYEDFSLQNYDPYPPIKAPVAV 264 >gi|118590864|ref|ZP_01548264.1| thymidylate synthase [Stappia aggregata IAM 12614] gi|118436386|gb|EAV43027.1| thymidylate synthase [Stappia aggregata IAM 12614] Length = 264 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G DR DRTG GTRS FG+QMRFDLS+GFP TTKK+H KS++HELL Sbjct: 1 MQQYLDLLSKILDEGVDRGDRTGTGTRSIFGHQMRFDLSQGFPCTTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWD+WAD++G+LGP+YG QWRSWP DG IDQI+++++ +R Sbjct: 61 WFLAGDTNIRYLKENGVKIWDDWADENGDLGPVYGYQWRSWPAPDGRSIDQIANLLKMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPESRRLIVSAWNPALVDEMALPPCHSLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HT GD HLY NHF+QA QL+RSPR LP+M INP + DL Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTFGDAHLYANHFDQAREQLTRSPRPLPEMKINPEVTDLS 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+P I A ++V Sbjct: 241 AFKFEDFELTGYDPLPHIAAPIAV 264 >gi|149179666|ref|ZP_01858171.1| thymidylate synthase [Bacillus sp. SG-1] gi|148851858|gb|EDL66003.1| thymidylate synthase [Bacillus sp. SG-1] Length = 264 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L +HV++ G+++ DRTG GT STFGYQMRFDLS+GFP+LTTKK+H KS++HELL Sbjct: 1 MKQYLELCKHVLENGTEKGDRTGTGTISTFGYQMRFDLSEGFPMLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW++WAD+ G+LGP+YG QWRSW G IDQIS ++++++ Sbjct: 61 WFLNGDTNVKYLQDNGVRIWNDWADETGDLGPVYGKQWRSWEGAGGETIDQISELIENIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRLIVNAWNVGEIDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A+V + GEF+HT GDVH+Y NH EQ LQL+R PR+LP + IN ++ D+ Sbjct: 181 YALLTMMIANVCDLEPGEFVHTFGDVHIYQNHMEQVKLQLTREPRSLPSIRINKDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 S+ +EDFTL Y+PH I VSV Sbjct: 241 SYSFEDFTLEDYDPHPHIKGVVSV 264 >gi|313200661|ref|YP_004039319.1| thymidylate synthase [Methylovorus sp. MP688] gi|312439977|gb|ADQ84083.1| thymidylate synthase [Methylovorus sp. MP688] Length = 264 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 168/264 (63%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G + DRTG GT S FGYQMRFDL+ GFPLLTTKKVH KS++HELL Sbjct: 1 MQTYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAAGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV+IWDEWAD +G LGP+YG QWR+WP DG+ IDQI+ +V +++ Sbjct: 61 WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGSHIDQITQVVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ QLSR+PR+LP M INP++ D+ Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYLNHMEQVKEQLSRTPRSLPTMQINPDVRDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF+L++Y+P+ I A V+V Sbjct: 241 AFRYEDFSLQNYDPYPPIKAPVAV 264 >gi|254470038|ref|ZP_05083442.1| thymidylate synthase [Pseudovibrio sp. JE062] gi|211960349|gb|EEA95545.1| thymidylate synthase [Pseudovibrio sp. JE062] Length = 264 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+R ++ G + DRTG GT+S FG+QMRF+LS+GFP++TTKK+H +S++HELL Sbjct: 1 MQQYLELMRRIMDEGVVKEDRTGTGTKSVFGHQMRFNLSEGFPVVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + V IWDEWAD++G+LGP+YG QWRSWP DG+ IDQI+++VQ ++ Sbjct: 61 WFLAGDTNIKYLKDNKVRIWDEWADENGDLGPVYGYQWRSWPKPDGSSIDQIANVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D MALPPCH LFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNPALVDDMALPPCHSLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+F+HTLGD HLY NH EQA+LQLSR PR LP M INP + D+ Sbjct: 181 YALLTMMIAQVCDLEPGDFVHTLGDAHLYLNHMEQAELQLSREPRALPVMRINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF L Y+PH I V+V Sbjct: 241 AFRYEDFALEGYDPHPHIKGVVAV 264 >gi|15595539|ref|NP_249033.1| thymidylate synthase [Pseudomonas aeruginosa PAO1] gi|107099326|ref|ZP_01363244.1| hypothetical protein PaerPA_01000338 [Pseudomonas aeruginosa PACS2] gi|116054070|ref|YP_788513.1| thymidylate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|218889083|ref|YP_002437947.1| thymidylate synthase [Pseudomonas aeruginosa LESB58] gi|254237422|ref|ZP_04930745.1| thymidylate synthase [Pseudomonas aeruginosa C3719] gi|254243441|ref|ZP_04936763.1| thymidylate synthase [Pseudomonas aeruginosa 2192] gi|296386838|ref|ZP_06876337.1| thymidylate synthase [Pseudomonas aeruginosa PAb1] gi|22096233|sp|Q9I6F1|TYSY_PSEAE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|122261789|sp|Q02U73|TYSY_PSEAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713171|sp|B7V2Q5|TYSY_PSEA8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|9946191|gb|AAG03731.1|AE004472_3 thymidylate synthase [Pseudomonas aeruginosa PAO1] gi|115589291|gb|ABJ15306.1| thymidylate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169353|gb|EAZ54864.1| thymidylate synthase [Pseudomonas aeruginosa C3719] gi|126196819|gb|EAZ60882.1| thymidylate synthase [Pseudomonas aeruginosa 2192] gi|218769306|emb|CAW25066.1| thymidylate synthase [Pseudomonas aeruginosa LESB58] Length = 264 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL Sbjct: 1 MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ L+ Sbjct: 61 WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMAMLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L YE H I A V+V Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264 >gi|154252890|ref|YP_001413714.1| thymidylate synthase [Parvibaculum lavamentivorans DS-1] gi|171769615|sp|A7HVX4|TYSY_PARL1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|154156840|gb|ABS64057.1| Thymidylate synthase [Parvibaculum lavamentivorans DS-1] Length = 264 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 174/264 (65%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R G + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H KS++HELL Sbjct: 1 MQQYLDLMRLARDTGVTKTDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ GD+N YL +GVSIWD+WAD++GELGP+YG QWRSWP DG IDQI ++V+ ++ Sbjct: 61 WFIAGDTNTRYLKANGVSIWDDWADENGELGPVYGHQWRSWPTPDGGKIDQIRNLVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D MALPPCHCLFQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVADVDSMALPPCHCLFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY NH EQAD QL+R P+ LP M INP++ L Sbjct: 181 YALLTMMVAQVTGLKPGEFIHTFGDAHLYLNHLEQADKQLAREPKKLPVMHINPDVKSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y+DFTL YE H I A V+V Sbjct: 241 DFTYDDFTLEGYEAHPHISAPVAV 264 >gi|229544326|ref|ZP_04433385.1| thymidylate synthase [Bacillus coagulans 36D1] gi|229325465|gb|EEN91141.1| thymidylate synthase [Bacillus coagulans 36D1] Length = 265 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL R V++ G + DRTG GT S FG+QMRF L GFPLLTTKK+H KS+++ELL Sbjct: 2 MKQYLDLCREVLENGVKKDDRTGTGTISVFGHQMRFHLQDGFPLLTTKKLHLKSIIYELL 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L+GD+NV YL +GV IW+EWAD++G+LGP+YG QWRSW DG IDQI+ +++ ++ Sbjct: 62 WMLKGDTNVKYLQENGVRIWNEWADENGDLGPVYGQQWRSWQTRDGRTIDQITQVIEQIK 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNV ID+MALPPCHC FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 122 TNPDSRRLIVNAWNVGEIDRMALPPCHCFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 181 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ LQL R PR LP+M++NP + D+ Sbjct: 182 YALLTMMIAQVTGLEPGDFVHTLGDAHIYLNHIEQVKLQLEREPRKLPKMVLNPEVKDIF 241 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFRYEDFTL+ Y P+ I +VSV Sbjct: 242 SFRYEDFTLKDYNPYPHIPGRVSV 265 >gi|313112042|ref|ZP_07797826.1| thymidylate synthase [Pseudomonas aeruginosa 39016] gi|310884328|gb|EFQ42922.1| thymidylate synthase [Pseudomonas aeruginosa 39016] Length = 264 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL Sbjct: 1 MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+ ++ L+ Sbjct: 61 WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIAHLMAMLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L YE H I A V+V Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264 >gi|326800370|ref|YP_004318189.1| Thymidylate synthase [Sphingobacterium sp. 21] gi|326551134|gb|ADZ79519.1| Thymidylate synthase [Sphingobacterium sp. 21] Length = 273 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 170/273 (62%), Positives = 214/273 (78%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G D++DRTG GTRS FGYQMRF+L +GFPL+TTKK+H +S++HEL+ Sbjct: 1 MQQYLDLMRHVYEHGVDKQDRTGTGTRSVFGYQMRFNLQEGFPLVTTKKLHLRSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+SYL + VSIWDEWAD++G LGP+YG QWRSWP DG IDQI+ ++ L+ Sbjct: 61 WFLKGETNISYLKENKVSIWDEWADENGNLGPVYGSQWRSWPTPDGKHIDQIAQVIHQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---------DNGKLSCQLYQRSGDVF 171 +P SRR IVSAWNVA I+KMALPPCH FQFYV +LSCQLYQRS D+F Sbjct: 121 NNPDSRRIIVSAWNVAEIEKMALPPCHAFFQFYVAPPNKEKGQTKAQLSCQLYQRSADIF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V + +FIHTLGD HLY+NH EQA LQL+R+P++LP++ Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEAADFIHTLGDAHLYSNHLEQATLQLTRTPKSLPKLK 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP I + FRYEDFTL Y+PH I A+V+V Sbjct: 241 INPEIKSIFDFRYEDFTLVDYDPHPHIKAEVAV 273 >gi|114331021|ref|YP_747243.1| thymidylate synthase [Nitrosomonas eutropha C91] gi|122314079|sp|Q0AHA4|TYSY_NITEC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|114308035|gb|ABI59278.1| thymidylate synthase [Nitrosomonas eutropha C91] Length = 264 Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MH YLDL+RHV+++G + DRTG GT S FGYQMRFDL +GFPL+TTK+ H KS++HELL Sbjct: 1 MHPYLDLMRHVLQYGHKKTDRTGTGTLSIFGYQMRFDLQQGFPLVTTKQCHVKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL ++G+SIW+EWADK GELGP+YG QWRSW IDQI+ ++Q ++ Sbjct: 61 WFLRGDTNIDYLKKNGISIWNEWADKSGELGPVYGHQWRSWTVSGDKSIDQIAQVIQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A P SRR I+SAWNV +DKMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ATPDSRRMIISAWNVGDLDKMALAPCHVLFQFYVVDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT+M+A + GEFIHT GD HLY NH EQA LQL+R P++LP M +NP I ++L Sbjct: 181 YSLLTLMIAQCCNLKPGEFIHTFGDAHLYLNHLEQARLQLTREPKSLPIMELNPAIRNIL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDFTL +Y+PH I A V+V Sbjct: 241 DFRYEDFTLHNYDPHPPIKAPVAV 264 >gi|152988193|ref|YP_001345831.1| thymidylate synthase [Pseudomonas aeruginosa PA7] gi|166231724|sp|A6UYE6|TYSY_PSEA7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|150963351|gb|ABR85376.1| thymidylate synthase [Pseudomonas aeruginosa PA7] Length = 264 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 175/264 (66%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFPL+TTKK H KS+VHELL Sbjct: 1 MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAAGFPLVTTKKCHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ L+ Sbjct: 61 WFLQGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMTMLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEFI T GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 181 YALLTLMVAQVAGLRPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L Y+ H I A V+V Sbjct: 241 DFRFEDFELVGYQAHPHIKAPVAV 264 >gi|85714701|ref|ZP_01045688.1| thymidylate synthase [Nitrobacter sp. Nb-311A] gi|85698586|gb|EAQ36456.1| thymidylate synthase [Nitrobacter sp. Nb-311A] Length = 264 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+QY DLL +++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+ +S+VHELL Sbjct: 1 MNQYHDLLERILREGAEKHDRTGTGTLSVFGHQMRFDLASGFPMLTTKKLPLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ +R Sbjct: 61 WFLRGETNIKYLKDNGVSIWDEWADENGDLGPVYGSQWRSWPAPDGGSIDQIANVIDMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +DKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G G+F+H+LGD HLY+NH EQA LQLSR R LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLSPGDFVHSLGDAHLYSNHLEQARLQLSRPARPLPTMTINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F Y DF L +Y+PH I A+V+V Sbjct: 241 AFCYGDFKLENYDPHPHIKAEVAV 264 >gi|209884416|ref|YP_002288273.1| thymidylate synthase [Oligotropha carboxidovorans OM5] gi|229558058|sp|B6JB67|TYSY_OLICO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|209872612|gb|ACI92408.1| thymidylate synthase [Oligotropha carboxidovorans OM5] Length = 264 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL H++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+ +K++VHELL Sbjct: 1 MHQYQDLLEHILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKKLPFKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GVSIWDEWAD +G+LGP+YG QWRSW DG IDQI+++VQ +R Sbjct: 61 WFLAGDTNVRYLQNNGVSIWDEWADANGDLGPVYGKQWRSWQAPDGRSIDQITNLVQMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A +++MALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVTAWNPADVEQMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V G F+HT GD HLY+NH +QA LQL+R+PR LP + INP + D+ Sbjct: 181 YALLMMMIAQVTDLAPGHFVHTFGDAHLYSNHLDQARLQLTRAPRALPTLRINPAVRDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L +Y+PH I A+V+V Sbjct: 241 GFRYEDFKLENYDPHPHIKAEVAV 264 >gi|311030413|ref|ZP_07708503.1| thymidylate synthase [Bacillus sp. m3-13] Length = 264 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL +H++ G+++ DRTG GT STFGYQMRFDL +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLCKHILHNGTEKEDRTGTGTISTFGYQMRFDLQEGFPLVTTKKLHVKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IW+EWAD++G+LGP+YG QWRSWP DG IDQI+ +++ ++ Sbjct: 61 WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGYQWRSWPTPDGESIDQIAKLIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D MALPPCH +FQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPDSRRLIVSAWNVANVDSMALPPCHTMFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEFIHTLGD H+Y+NH EQ +LQL R P+ LP+M +N + + Sbjct: 181 YALLTMMVAQVCELEPGEFIHTLGDAHIYSNHIEQVNLQLGREPKKLPKMKLNKEVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDFTL Y+ H I VSV Sbjct: 241 DFKYEDFTLVDYDAHPHIKGVVSV 264 >gi|307544291|ref|YP_003896770.1| thymidylate synthase [Halomonas elongata DSM 2581] gi|307216315|emb|CBV41585.1| thymidylate synthase [Halomonas elongata DSM 2581] Length = 284 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 165/261 (63%), Positives = 215/261 (82%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL+R V++ G +R DRTGVGTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELLWFL Sbjct: 24 YLDLMRTVLEHGVERDDRTGVGTRSLFGHQMRFDLSRGFPLITTKKLHLRSIIHELLWFL 83 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 GD+N++YL +GV IWDEWAD++G+LGP+YG QWRSWPD G +DQI+ +++ LR +P Sbjct: 84 AGDTNIAYLKENGVRIWDEWADENGDLGPVYGYQWRSWPDPRGGHVDQIAGLLEQLRRNP 143 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWN AL+D+MALPPCHCLFQFYV G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 144 QSRRLIVSAWNPALVDEMALPPCHCLFQFYVAEGRLSCQLYQRSADIFLGVPFNIASYAL 203 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A V G + G+F+HT GD HLY NH EQA+LQL+R+PR P++ ++P++ DL +FR Sbjct: 204 LTRMIAQVAGLEPGDFVHTFGDAHLYLNHLEQAELQLTRTPRPAPRLTLDPSVDDLFAFR 263 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +E + Y+PH I A+V+V Sbjct: 264 FEHIAIEDYDPHPHIKAEVAV 284 >gi|291296233|ref|YP_003507631.1| thymidylate synthase [Meiothermus ruber DSM 1279] gi|290471192|gb|ADD28611.1| thymidylate synthase [Meiothermus ruber DSM 1279] Length = 264 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+RHV++ G D+ DRTGVGTRS FGYQMRFDL +GFPL+TTKKVHWKSVV+ELL Sbjct: 1 MQQYHDLMRHVLEHGVDKSDRTGVGTRSVFGYQMRFDLRQGFPLVTTKKVHWKSVVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ +L +GV+IWDEWAD+ GELGP+YG QWRSW DG IDQ++ +++ +R Sbjct: 61 WFLRGETNIGFLRENGVTIWDEWADEAGELGPVYGKQWRSWAGPDGQTIDQLAWVLEEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + +MAL PCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVADLPQMALAPCHILFQFYVAQGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + GE IHTLGD HLY NHFEQA LQLSR PR LP + +NP + DL Sbjct: 181 YALLTHMVAQVTGLEPGELIHTLGDAHLYRNHFEQARLQLSREPRPLPTLRLNPAVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F Y+D L +Y PH I A V+V Sbjct: 241 AFTYDDIELLNYNPHPRIPAPVAV 264 >gi|255535905|ref|YP_003096276.1| Thymidylate synthase [Flavobacteriaceae bacterium 3519-10] gi|255342101|gb|ACU08214.1| Thymidylate synthase [Flavobacteriaceae bacterium 3519-10] Length = 302 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+++I G+++ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL Sbjct: 39 MQNYLDLLQNIIDNGTNKTDRTGTGTRSIFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 98 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIW+EWAD++G+LGP+YGVQWRSW DG V+DQIS ++ ++ Sbjct: 99 WFLKGDTNIKYLADNGVSIWNEWADENGDLGPVYGVQWRSWNGADGKVVDQISDVIDQIK 158 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV+ I MAL PCH LFQFYV +GKLS QLYQRS DVFLG+PFNIAS Sbjct: 159 KNPDSRRLIVSAWNVSEIPNMALAPCHALFQFYVADGKLSLQLYQRSADVFLGVPFNIAS 218 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V + G+++HT GDVH+YNNHFEQ + QLSR+P+ LP M +NP I D+ Sbjct: 219 YALLLMMVAQVCELEVGDYVHTFGDVHIYNNHFEQVNKQLSRTPKPLPVMKLNPEIKDIF 278 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF +EDFTL +Y+P+ I A V+V Sbjct: 279 SFNFEDFTLENYDPYPGIKAPVAV 302 >gi|154247442|ref|YP_001418400.1| thymidylate synthase [Xanthobacter autotrophicus Py2] gi|154161527|gb|ABS68743.1| Thymidylate synthase [Xanthobacter autotrophicus Py2] Length = 264 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLLR ++ G + DRTG GT S FG+QMRFDL +GFPL+TTKK+H KS+VHELL Sbjct: 1 MHQYHDLLRRILNEGVRKDDRTGTGTLSVFGHQMRFDLGEGFPLVTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GVSIWDEWAD+ G+LGP+YG QWRSWP +G VIDQI+ +V +R Sbjct: 61 WFLAGDTNVRYLKDNGVSIWDEWADEKGDLGPVYGHQWRSWPTPEGGVIDQIAQVVSDIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A + KMALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPADVSKMALPPCHCLFQFYVLEGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G G+F+HTLGD HLY NH EQA QL R+PR LP++ +NP + DL Sbjct: 181 YALLTHMVAQVTGLGVGDFVHTLGDAHLYVNHLEQARAQLERTPRALPRLALNPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYED + Y+PH AI A V+V Sbjct: 241 AFRYEDVEIVGYDPHPAIKAPVAV 264 >gi|300776697|ref|ZP_07086555.1| thymidylate synthase B [Chryseobacterium gleum ATCC 35910] gi|300502207|gb|EFK33347.1| thymidylate synthase B [Chryseobacterium gleum ATCC 35910] Length = 264 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL Sbjct: 1 MQNYLDLLQHILDNGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSW DG V+DQI+ ++ ++ Sbjct: 61 WFLKGDTNIKYLKDNGVSIWDEWADENGDLGPVYGAQWRSWSGADGKVVDQITEVIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I MAL PCH LFQFYV +GKLS QLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNVAEIPNMALAPCHALFQFYVADGKLSLQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V + G+++H+ GDVH+YNNHFEQ + QL+R PR LP M +NP++ ++ Sbjct: 181 YALLLMMVAQVCELEVGDYVHSFGDVHIYNNHFEQVNRQLAREPRALPTMKLNPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDFTL +Y+PH I A V++ Sbjct: 241 DFDFEDFTLENYDPHPGIKAPVAI 264 >gi|258652990|ref|YP_003202146.1| thymidylate synthase [Nakamurella multipartita DSM 44233] gi|258556215|gb|ACV79157.1| thymidylate synthase [Nakamurella multipartita DSM 44233] Length = 264 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ ++ G+ + DRTG GTRS FG+QMRFDLS GFPL+TTKKVH +SV+ ELL Sbjct: 1 MQQYLDLMDRILTTGAVKSDRTGTGTRSIFGHQMRFDLSAGFPLVTTKKVHTRSVIVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L GV+IWDEWAD DGELGP+YG QWRSWP DG IDQI+ +V+SLR Sbjct: 61 WFLQGSTNVHWLQERGVTIWDEWADADGELGPVYGHQWRSWPAPDGRHIDQIAGLVRSLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRRHIVSAWNVA +D+MALPPCH +FQFYV +G LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRHIVSAWNVAEVDQMALPPCHTMFQFYVADGALSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V+G + GEFIHTLGD HLY NH +QA LQL+R+PR LP++ + P++ ++ Sbjct: 181 YALLTGMMAQVVGLRPGEFIHTLGDAHLYANHLDQARLQLTRAPRPLPELELKPDVTEID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D +R+Y+PH AI A ++V Sbjct: 241 AFTVDDIVIRNYDPHPAIKAPIAV 264 >gi|30248582|ref|NP_840652.1| thymidylate synthase [Nitrosomonas europaea ATCC 19718] gi|62901360|sp|Q82WU3|TYSY_NITEU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|30180177|emb|CAD84479.1| Thymidylate synthase [Nitrosomonas europaea ATCC 19718] Length = 264 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+QYLDL+RHV+++G + DRTG GT S FGYQMRFDL GFPL+TTKK H KS++HELL Sbjct: 1 MYQYLDLMRHVLQYGHKKSDRTGTGTLSVFGYQMRFDLQTGFPLVTTKKCHVKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ YL R+GVSIWDEWAD++G+LGPIYG QWRSW DG VIDQIS ++Q ++ Sbjct: 61 WFLRGETNIDYLKRNGVSIWDEWADENGDLGPIYGHQWRSWAASDGTVIDQISQVIQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV +DKM L PCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ETPDSRRMIVSAWNVGDLDKMKLAPCHVLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT+M+A Q GEF+HT GD HLY NH EQA LQL R PR LP M +N + ++ Sbjct: 181 YSLLTLMIAQCCDLQPGEFVHTFGDAHLYLNHLEQARLQLEREPRALPAMQLNSTVRNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YEDFTL Y+P+ I A V+V Sbjct: 241 DFGYEDFTLHDYDPYPPIKAPVAV 264 >gi|75676536|ref|YP_318957.1| thymidylate synthase [Nitrobacter winogradskyi Nb-255] gi|123773189|sp|Q3SQ36|TYSY_NITWN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|74421406|gb|ABA05605.1| thymidylate synthase [Nitrobacter winogradskyi Nb-255] Length = 264 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+QY DLL ++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+ ++S+VHELL Sbjct: 1 MNQYHDLLERILGEGTEKHDRTGTGTLSVFGHQMRFDLASGFPMLTTKKLPFRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ YL +GVSIWDEWAD +G+LGP+YG QWRSWP DG IDQI++++ ++ Sbjct: 61 WFLRGETNIKYLKDNGVSIWDEWADANGDLGPVYGSQWRSWPARDGRGIDQIANVIDLIQ 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADVDRMALPPCHCLFQFYVAGGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+H+LGD HLY+NH +QA LQLSR R LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHLDQARLQLSRPTRPLPTMTINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF L +Y+PH I A+V+V Sbjct: 241 AFRYEDFRLENYDPHPHIKAEVAV 264 >gi|49083028|gb|AAT50914.1| PA0342 [synthetic construct] Length = 265 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 175/264 (66%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + D TG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL Sbjct: 1 MKQYLDLMRHVREHGTFKSDCTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ L+ Sbjct: 61 WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMAMLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L YE H I A V+V Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264 >gi|323344523|ref|ZP_08084748.1| thymidylate synthase [Prevotella oralis ATCC 33269] gi|323094650|gb|EFZ37226.1| thymidylate synthase [Prevotella oralis ATCC 33269] Length = 264 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++K G + DRTG GT S FG QMRF+L +GFPLLTTKK+H KS+++ELL Sbjct: 1 MRQYLDLLDRILKEGVKKGDRTGTGTISIFGNQMRFNLEEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV +L HGV IW+EWAD++G+LGP+YG QWRSWPDY G IDQI +++ +R Sbjct: 61 WFLKGDTNVRFLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLNQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A +D MALPPCHCLFQFYV NG+LS QLYQRS D FLG+PFNIAS Sbjct: 121 QHPDSRRMIVSAWNPAEVDDMALPPCHCLFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V G + G+FIHT GD HLY NH EQA LQLSR+PR LP+M++NP++ DL Sbjct: 181 YALLLMMMAQVTGLKAGDFIHTTGDTHLYLNHLEQAKLQLSRTPRALPKMLLNPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF L+ Y+P I A+VSV Sbjct: 241 AFHFEDFELKDYDPLPHISAQVSV 264 >gi|115372682|ref|ZP_01459989.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] gi|310823834|ref|YP_003956192.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] gi|115370403|gb|EAU69331.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] gi|309396906|gb|ADO74365.1| Thymidylate synthase [Stigmatella aurantiaca DW4/3-1] Length = 264 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 175/264 (66%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+K G+ R DRTG GT S FG Q+RFDL++GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYLDLLDRVLKDGTKRGDRTGTGTLSLFGPQLRFDLTQGFPLLTTKKLHLKSILHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W LRGD++V L GV+IWDEWAD G LGP+YG QWRSW G IDQ+ +V+SLR Sbjct: 61 WMLRGDTSVRSLQAQGVTIWDEWADAQGNLGPVYGHQWRSWSGPQGQSIDQMRQVVESLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA + M LPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPESRRHIVSAWNVADLPAMKLPPCHILFQFYVANGRLSCQLYQRSADLFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G EFIHTLGD HLY NH EQA QL+R PR LP+M +NP + DL Sbjct: 181 YALLTMMVAQATGLTAHEFIHTLGDAHLYLNHVEQARTQLAREPRPLPRMQLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDFTL+ YEPH AI A V+V Sbjct: 241 AFRYEDFTLQEYEPHPAIKAPVAV 264 >gi|146309227|ref|YP_001189692.1| thymidylate synthase [Pseudomonas mendocina ymp] gi|166231725|sp|A4Y044|TYSY_PSEMY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145577428|gb|ABP86960.1| thymidylate synthase [Pseudomonas mendocina ymp] Length = 264 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFP++TTKK H +S++HELL Sbjct: 1 MKQYLDLMRHVREHGTFKEDRTGTGTYSVFGYQMRFDLADGFPIVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP +G IDQI+ +++ +R Sbjct: 61 WFLQGDTNIKYLKDNGVSIWDEWADENGDLGPVYGYQWRSWPAPNGESIDQIAKLIEMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V Q GEFI T GD HLY NH EQADLQL+R P LP M +NP + DLL Sbjct: 181 YALLTLMVAQVCDLQPGEFIWTGGDCHLYANHIEQADLQLTRQPLPLPTMKLNPEVKDLL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE H I A V+V Sbjct: 241 AFRFEDFELVGYEAHPHIKAPVAV 264 >gi|321311648|ref|YP_004203935.1| thymidylate synthase [Bacillus subtilis BSn5] gi|320017922|gb|ADV92908.1| thymidylate synthase [Bacillus subtilis BSn5] Length = 267 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 4 MKQYKDLCRHVLEHGEKKEDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 64 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 123 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 124 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 183 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL R R LPQ+ + + Sbjct: 184 YALLTMMIAHVTGLESGEFIHTFGDVHIYQNHIEQINLQLERDVRPLPQLRFARKVDSIF 243 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF + Y+PH I VSV Sbjct: 244 NFAFEDFIIEDYDPHPHIKGAVSV 267 >gi|91775259|ref|YP_545015.1| thymidylate synthase [Methylobacillus flagellatus KT] gi|91775403|ref|YP_545159.1| thymidylate synthase [Methylobacillus flagellatus KT] gi|115502470|sp|Q9RAM7|TYSY_METFK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91709246|gb|ABE49174.1| thymidylate synthase [Methylobacillus flagellatus KT] gi|91709390|gb|ABE49318.1| thymidylate synthase [Methylobacillus flagellatus KT] Length = 264 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G + DRTG GT S FGYQMRFDLS+GFPLLTTKKVH KS++HELL Sbjct: 1 MKVYHDLMRHVLEQGHKKEDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV+IWDEWAD +G LGP+YG QWR+WP DG IDQIS ++ +++ Sbjct: 61 WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGGHIDQISEVIAAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +DKM LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADVDKMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+F+HTLGD H+Y NH EQ QLSR P LP M INP + D+ Sbjct: 181 YALLTMMVAQVCDLKLGDFVHTLGDAHIYLNHLEQVKEQLSREPYPLPVMRINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDFTL +Y+ H AI A V+V Sbjct: 241 AFRFEDFTLENYQSHPAIKAPVAV 264 >gi|312887675|ref|ZP_07747266.1| thymidylate synthase [Mucilaginibacter paludis DSM 18603] gi|311299854|gb|EFQ76932.1| thymidylate synthase [Mucilaginibacter paludis DSM 18603] Length = 273 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 171/273 (62%), Positives = 209/273 (76%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV+ G+ + DRTG GT S FGYQMRF+L GFPL+TTKK+H KS++HEL+ Sbjct: 1 MKQYLDLMRHVLDTGAQKHDRTGTGTISVFGYQMRFNLQDGFPLVTTKKLHLKSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD DG LGP+YG QWRSWP DG IDQIS+++ +L+ Sbjct: 61 WFLSGDTNIRYLKENGVRIWDEWADADGNLGPVYGYQWRSWPKPDGGHIDQISNVINTLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLYQRSGDVF 171 +P SRR +VSAWNVA +++MALPPCH LFQFYV GKLSCQLYQRS D+F Sbjct: 121 NNPDSRRIMVSAWNVADVEQMALPPCHSLFQFYVQPADAAKGETRGKLSCQLYQRSADIF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V + G+FIHTLGD HLYNNH EQ LQLSR PR LP M Sbjct: 181 LGVPFNIASYALLTMMVAQVCNLEAGDFIHTLGDAHLYNNHIEQTRLQLSREPRPLPLMK 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP++ D+ F++EDF L +Y+PH I V+V Sbjct: 241 INPDVKDIFGFKFEDFVLENYDPHPHIKGAVAV 273 >gi|92118240|ref|YP_577969.1| thymidylate synthase [Nitrobacter hamburgensis X14] gi|123265118|sp|Q1QJT8|TYSY_NITHX RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91801134|gb|ABE63509.1| thymidylate synthase [Nitrobacter hamburgensis X14] Length = 264 Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+QY DLL ++ G+++ DRTG GT S FG+QMRF+L+ GFP+LTTKK+ KS+VHELL Sbjct: 1 MNQYHDLLERILSDGAEKHDRTGTGTLSIFGHQMRFNLASGFPMLTTKKLPLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV YL HGVSIWDEWAD +G+LGP+YG QWRSWP DG IDQI+++V + Sbjct: 61 WFLKGETNVRYLREHGVSIWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIANVVDMIG 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A +DKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RSPDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+H+LGD HLY NH +QA LQL+R R+LP M INP + + Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYLNHLDQARLQLTRPTRSLPTMTINPEVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF L +Y+PH I A+V+V Sbjct: 241 AFRYEDFKLENYDPHPHIKAEVAV 264 >gi|254468912|ref|ZP_05082318.1| thymidylate synthase [beta proteobacterium KB13] gi|207087722|gb|EDZ65005.1| thymidylate synthase [beta proteobacterium KB13] Length = 264 Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ G + DRTG GT S FGYQ+RFDLS+ FPLLTTKK+H KSV+HELL Sbjct: 1 MRQYLDLLNHVLEHGDKKEDRTGTGTISVFGYQIRFDLSEKFPLLTTKKIHLKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N+ YL +GVSIWDEWAD+ G+LGP+YG QWRSW DG IDQIS+++++++ Sbjct: 61 WFLKGSTNIGYLKENGVSIWDEWADEHGDLGPVYGSQWRSWQTSDGRTIDQISNLIENIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +DKM LPPCHC FQFYV N KLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGDVDKMKLPPCHCFFQFYVANDKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V GEF+HTLGD H+Y+NH EQ QLSR + LP M INP++ D+ Sbjct: 181 YALLTLMIAQVTNLAPGEFVHTLGDAHIYSNHIEQVKQQLSREAKDLPIMKINPHVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+Y+DF + +Y+PH I A V+V Sbjct: 241 SFKYDDFEILNYDPHPLIKAPVAV 264 >gi|6647289|gb|AAF21131.1|L78665_5 thymidylate synthase [Methylobacillus flagellatus] Length = 264 Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust. Identities = 168/264 (63%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G + DRTG GT S FGYQMRFDLS+GFPLLTTKKVH +++HELL Sbjct: 1 MKVYHDLMRHVLEQGHKKEDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKVHLNAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV+IWDEWAD +G LGP+YG QWR+WP DG IDQIS ++ +++ Sbjct: 61 WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGGHIDQISEVIAAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNVA +DKM LPPCH LFQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVADVDKMELPPCHALFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+F+HTLGD H+Y NH EQ QLSR P LP M INP + D+ Sbjct: 181 YALLTMMVARVCDLELGDFVHTLGDAHIYLNHLEQVKEQLSREPYPLPVMRINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDFTL +Y+ H AI A V+V Sbjct: 241 AFRFEDFTLENYQSHPAIKAPVAV 264 >gi|189502717|ref|YP_001958434.1| hypothetical protein Aasi_1410 [Candidatus Amoebophilus asiaticus 5a2] gi|189498158|gb|ACE06705.1| hypothetical protein Aasi_1410 [Candidatus Amoebophilus asiaticus 5a2] Length = 264 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL HV+ G +++DRTG GT+S FGYQMRF+L++GFPL+TTKK+H KS+++ELL Sbjct: 1 MKQYLSLLGHVLHNGQEKKDRTGTGTKSIFGYQMRFNLAEGFPLMTTKKLHMKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL+++GV+IWDEWAD G LGPIYG QWRSWP + +DQI +++ ++ Sbjct: 61 WFLQGNTNIGYLNQNGVTIWDEWADAQGNLGPIYGYQWRSWPTSNHGKVDQIEQVIKQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR +VSAWNV +DKMALPPCH LFQFYV N KLSCQLYQRS D+FLGIPFNIAS Sbjct: 121 ANPDSRRLLVSAWNVGELDKMALPPCHVLFQFYVANNKLSCQLYQRSADIFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + GEFIHTLGD HLYNNH EQA LQLSR+PR LP + +N + D+ Sbjct: 181 YALLTTMVAQVCDLEVGEFIHTLGDAHLYNNHIEQAQLQLSRAPRPLPTLKVNSAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+Y+DF + +Y P+ +I A ++V Sbjct: 241 AFQYDDFCIENYNPYPSIKAPIAV 264 >gi|110637694|ref|YP_677901.1| thymidylate synthase [Cytophaga hutchinsonii ATCC 33406] gi|123163654|sp|Q11VK5|TYSY_CYTH3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|110280375|gb|ABG58561.1| thymidylate synthase [Cytophaga hutchinsonii ATCC 33406] Length = 264 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++H++ G + DRTG GT S FGYQMRF+L +GFPLLTTKK+H +S+ HELL Sbjct: 1 MKQYHDLMQHILDQGVKKEDRTGTGTVSVFGYQMRFNLQEGFPLLTTKKLHMRSITHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G LGP+YG QWRSWP DG IDQI+++V ++ Sbjct: 61 WFLQGDTNIKYLKDNNVSIWDEWADENGNLGPVYGYQWRSWPTPDGKHIDQITNVVNMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I+KM LPPCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPDSRRLIVSAWNVGEIEKMKLPPCHAFFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q G+F+HTLGD HLY+NH EQA LQLSR R LP M INP++ + Sbjct: 181 YALLTMMVAQVCGLQAGDFVHTLGDAHLYSNHLEQAKLQLSRDFRPLPAMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL Y+PH I A V+V Sbjct: 241 DFKFEDFTLEGYDPHPHIKAAVAV 264 >gi|146280809|ref|YP_001170962.1| thymidylate synthase [Pseudomonas stutzeri A1501] gi|145569014|gb|ABP78120.1| thymidylate synthase [Pseudomonas stutzeri A1501] Length = 272 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL Sbjct: 9 MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELL 68 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IWDEWAD++GELGP+YG QWRSWP +G IDQI++++ ++ Sbjct: 69 WFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIK 128 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 129 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 188 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V + GEFI + GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 189 YALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQADLQLTREPLPLPTMKLNPEVKDLF 248 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE H I A V+V Sbjct: 249 AFRFEDFELVGYEAHPHIKAPVAV 272 >gi|293375484|ref|ZP_06621763.1| thymidylate synthase [Turicibacter sanguinis PC909] gi|325844947|ref|ZP_08168312.1| thymidylate synthase [Turicibacter sp. HGF1] gi|292645884|gb|EFF63915.1| thymidylate synthase [Turicibacter sanguinis PC909] gi|325488997|gb|EGC91386.1| thymidylate synthase [Turicibacter sp. HGF1] Length = 264 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ G+ + DRTG GT STFGYQMRFDL++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLDLLNHVLENGTTKGDRTGTGTISTFGYQMRFDLAEGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ GD+NV YL +GV IW+EWAD++G LGP+YG QWR W +G VIDQ++ +V+ ++ Sbjct: 61 WFISGDTNVKYLQENGVRIWNEWADEEGNLGPVYGKQWRRWEGANGTVIDQLAEVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNV +D+MALPPCH LFQFYV++GKLSC LYQRS D+FLG+PFNIAS Sbjct: 121 TNPNSRRLIVNAWNVGELDQMALPPCHLLFQFYVNDGKLSCMLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HTLGD H+Y NH EQ +QL R R LP M +N ++ + Sbjct: 181 YALLTMMIAQVTGLEVGEFVHTLGDAHIYQNHLEQVKIQLGRDIRPLPTMKLNQDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDFTL Y+PH + V+V Sbjct: 241 DFKYEDFTLEGYDPHPLLKGVVAV 264 >gi|325860307|ref|ZP_08173429.1| thymidylate synthase [Prevotella denticola CRIS 18C-A] gi|325482186|gb|EGC85197.1| thymidylate synthase [Prevotella denticola CRIS 18C-A] Length = 264 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL ++ G+++ DRTG GT S FG QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLNLLNCILTEGAEKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G LGP+YG QWRSWPDY G IDQIS++V+ +R Sbjct: 61 WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQISNVVEMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HCPESRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFRYEDF L Y P I A+V+V Sbjct: 241 SFRYEDFELTDYHPWPHISAEVAV 264 >gi|330505459|ref|YP_004382328.1| thymidylate synthase [Pseudomonas mendocina NK-01] gi|328919745|gb|AEB60576.1| thymidylate synthase [Pseudomonas mendocina NK-01] Length = 264 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFP++TTKK H +S++HELL Sbjct: 1 MKQYLDLMRHVREHGTFKEDRTGTGTYSVFGYQMRFDLADGFPIVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD++G LGP+YG QWRSWP +G IDQI+ +++ ++ Sbjct: 61 WFLQGDTNIKYLKDNGVSIWDEWADENGNLGPVYGYQWRSWPAPNGESIDQIAKLIEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V Q GEFI T GD HLY NH EQADLQL+R P LP M +NP + DLL Sbjct: 181 YALLTLMVAQVCDLQPGEFIWTGGDCHLYANHIEQADLQLTRQPLPLPTMKLNPEVKDLL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L YE H I A V+V Sbjct: 241 AFKFEDFELVGYEAHPHIKAPVAV 264 >gi|172045633|sp|A4VGL9|TYSY_PSEU5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|327479077|gb|AEA82387.1| thymidylate synthase [Pseudomonas stutzeri DSM 4166] Length = 264 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL Sbjct: 1 MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IWDEWAD++GELGP+YG QWRSWP +G IDQI++++ ++ Sbjct: 61 WFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V + GEFI + GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 181 YALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQADLQLTREPLPLPTMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE H I A V+V Sbjct: 241 AFRFEDFELVGYEAHPHIKAPVAV 264 >gi|325104763|ref|YP_004274417.1| thymidylate synthase [Pedobacter saltans DSM 12145] gi|324973611|gb|ADY52595.1| thymidylate synthase [Pedobacter saltans DSM 12145] Length = 264 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV+ G + DRTG GT S FGYQMRF+L +GFPLLTTKK+H KS++HEL+ Sbjct: 1 MKQYHDLMQHVLDNGVQKHDRTGTGTISVFGYQMRFNLEEGFPLLTTKKLHLKSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G LGP+YG QWRSWP DG IDQIS I+ ++ Sbjct: 61 WFLSGDTNIKYLKENGVRIWDEWADEEGNLGPVYGSQWRSWPTPDGRHIDQISQIISQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I+ MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVAEIENMALPPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+FIHTLGD HLYNNH EQA LQLSR R LP M INP + D+ Sbjct: 181 YALLTMMVAQVCDLKPGDFIHTLGDAHLYNNHLEQAKLQLSRDFRPLPTMRINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 GFKFEDFVLENYDPHPHIKGAVAV 264 >gi|299131893|ref|ZP_07025088.1| thymidylate synthase [Afipia sp. 1NLS2] gi|298592030|gb|EFI52230.1| thymidylate synthase [Afipia sp. 1NLS2] Length = 264 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL ++ G+ + DRTG GT S FG+QMRF+L+ GFP+ TTKK+ +K++VHELL Sbjct: 1 MHQYHDLLERILSDGAQKGDRTGTGTLSVFGHQMRFNLAAGFPMTTTKKLPFKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV+IWDEWAD +G+LGP+YG QWRSW DG IDQI+++++ +R Sbjct: 61 WFLAGDTNVRYLQNNGVTIWDEWADANGDLGPVYGKQWRSWQAPDGRSIDQIANLIRMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A +D MALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TTPDSRRLIVSAWNPADVDHMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G+FIHTLGD HLY+NH EQA LQL+R PR LP + INP + D+ Sbjct: 181 YALLTMMIAQVTDLAPGDFIHTLGDAHLYSNHLEQARLQLTRRPRALPAVHINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L +Y+PH I A+V+V Sbjct: 241 GFRYEDFKLENYDPHPHIKAEVAV 264 >gi|220928734|ref|YP_002505643.1| thymidylate synthase [Clostridium cellulolyticum H10] gi|254790234|sp|B8I0T8|TYSY_CLOCE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219999062|gb|ACL75663.1| thymidylate synthase [Clostridium cellulolyticum H10] Length = 264 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL +H++ G + DRTG GT STFGYQMRFDL KGFPLLTTKK+H KS++HELL Sbjct: 1 MQQYLDLCKHILNNGIKKEDRTGTGTISTFGYQMRFDLQKGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ G++N+ YL +GVSIWDEWAD++G LGP+YG QWRSW DG IDQ+ ++ ++ Sbjct: 61 WFISGNTNIKYLKDNGVSIWDEWADENGNLGPVYGHQWRSWDTADGRSIDQLKGVIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVS+WNV I+KMALPPCHC +QFYV NG LSC LYQRS DVF+G+PFNIAS Sbjct: 121 NNPDSRRLIVSSWNVGEIEKMALPPCHCFYQFYVVNGTLSCMLYQRSADVFIGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+L TMM+A G + GEF+HTLGD H+Y NH EQ LQLSR PR LP+M INP+I DL Sbjct: 181 YALFTMMIAQSCGLRAGEFVHTLGDAHIYLNHVEQVKLQLSRDPRPLPKMNINPDIKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+Y DFTL Y+PH I V+V Sbjct: 241 QFKYSDFTLTDYDPHPHIKGAVAV 264 >gi|296329488|ref|ZP_06871975.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674812|ref|YP_003866484.1| thymidylate synthase B [Bacillus subtilis subsp. spizizenii str. W23] gi|317412155|sp|E0U0H8|TYSY2_BACPZ RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2; AltName: Full=Thymidylate synthase B; Short=TS B; Short=TSase B gi|296153370|gb|EFG94232.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413056|gb|ADM38175.1| thymidylate synthase B [Bacillus subtilis subsp. spizizenii str. W23] Length = 264 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLEHGEKKGDRTGTGTISTFGYQMRFHLQEGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL+R R LP++ I + Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLTRDVRPLPKLRFAREIDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF + Y+PH I VSV Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264 >gi|327402847|ref|YP_004343685.1| thymidylate synthase [Fluviicola taffensis DSM 16823] gi|327318355|gb|AEA42847.1| thymidylate synthase [Fluviicola taffensis DSM 16823] Length = 264 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+H++ G+ + DRTG GT STFGYQMR++L +GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYHDLLQHILDKGTFKGDRTGTGTLSTFGYQMRYNLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQIS+++ ++ Sbjct: 61 WFLQGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPTPDGGSIDQISNLIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNVA +D MALPPCH +FQFYV +GKLSCQLYQRS D FLG+PFNIAS Sbjct: 121 KNPNSRRLIVNAWNVAYVDNMALPPCHTMFQFYVADGKLSCQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEFIHTLGD HLY+NH +QA LQL R R LP M INP + D+ Sbjct: 181 YALLTMMIAQVCDLKPGEFIHTLGDAHLYSNHLDQAKLQLERDFRPLPTMKINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y+PH I A ++V Sbjct: 241 GFKYEDFELLNYDPHPTIKAPIAV 264 >gi|297538294|ref|YP_003674063.1| thymidylate synthase [Methylotenera sp. 301] gi|297257641|gb|ADI29486.1| thymidylate synthase [Methylotenera sp. 301] Length = 264 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +LL HV+ G+ + DRTG GT S FGYQMRF+L +GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYTELLNHVLAHGNQKTDRTGTGTLSVFGYQMRFNLEEGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV IWDEWAD +G LGP+YG QWR+WP DG IDQI+ +V +++ Sbjct: 61 WFLQGSTNIAYLKENGVRIWDEWADDNGNLGPVYGYQWRNWPKPDGTHIDQITQVVNAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ QLSR R+LPQM INP + ++ Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYTNHMEQVHEQLSRDIRSLPQMHINPEVHNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +Y+PH AI V+V Sbjct: 241 DFKFEDFTLVNYDPHPAIKGLVAV 264 >gi|311940|emb|CAA49350.1| thymidylate synthase B [Bacillus subtilis] gi|448267|prf||1916395A thymidylate synthase B Length = 264 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLEHGEKKGDRTGTGTISTFGYQMRFHLQEGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL+R R LP++ I + Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLTRDLRPLPKLRFAREIDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF + Y+PH I VSV Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264 >gi|282858545|ref|ZP_06267716.1| thymidylate synthase [Prevotella bivia JCVIHMP010] gi|282588670|gb|EFB93804.1| thymidylate synthase [Prevotella bivia JCVIHMP010] Length = 264 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR + G + DRTG GT S FG+QMRF+++ GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLRRITTEGVKKEDRTGTGTLSVFGHQMRFNMADGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL HGV IW+EWAD++G+LGPIYG QWRSWPDY G IDQI ++++ ++ Sbjct: 61 WFLNGDTNVKYLQEHGVRIWNEWADENGDLGPIYGHQWRSWPDYKGGAIDQIKNVLEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWN A ++ MALPPCHCLFQFYV +GKLS QLYQRS D FLG+PFNIAS Sbjct: 121 NTPDSRRMLVSAWNPAEVENMALPPCHCLFQFYVASGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY NH EQ +LQL+R+PR LP+M INP++ DL Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQVELQLTRTPRPLPKMNINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF YEDF L Y P+ I V+V Sbjct: 241 SFNYEDFQLEDYAPYPHISGIVAV 264 >gi|294500806|ref|YP_003564506.1| thymidylate synthase [Bacillus megaterium QM B1551] gi|295706151|ref|YP_003599226.1| thymidylate synthase [Bacillus megaterium DSM 319] gi|294350743|gb|ADE71072.1| thymidylate synthase [Bacillus megaterium QM B1551] gi|294803810|gb|ADF40876.1| thymidylate synthase [Bacillus megaterium DSM 319] Length = 264 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L HV+ G+ + DRTG GT STFGYQMRF+L +GFP+LTTKK+H KS++HELL Sbjct: 1 MKQYLELCEHVLANGTKKEDRTGTGTISTFGYQMRFNLQEGFPVLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSWP DG IDQI++++ ++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADENGELGPVYGHQWRSWPTPDGEKIDQITNVINQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV+ +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRLMVSAWNVSDVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+F+HT GD H+Y+NH EQ +LQL+R P LP+M INP++ + Sbjct: 181 YALLTMMVAQVCDLEPGDFVHTFGDAHIYSNHIEQVNLQLTREPHALPKMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y H I VSV Sbjct: 241 DFKFEDFELVDYNAHPHIKGAVSV 264 >gi|302877663|ref|YP_003846227.1| thymidylate synthase [Gallionella capsiferriformans ES-2] gi|302580452|gb|ADL54463.1| thymidylate synthase [Gallionella capsiferriformans ES-2] Length = 264 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L++HV+ G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL Sbjct: 1 MRTYLNLMQHVLDNGTKKSDRTGTGTVSVFGYQMRFDLAQGFPLVTTKKCHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N+ YL HGV IWDEWAD+ G+LGP+YG QWRSW DG VIDQI V L+ Sbjct: 61 WFLQGYTNIGYLKEHGVKIWDEWADEHGDLGPVYGHQWRSWEAVDGRVIDQIKIAVDQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVSEGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V + G+F+HT GD HLY NH EQ LQLSR P LP M INP++ D+ Sbjct: 181 YALLTLMMAQVCNLEPGDFVHTFGDAHLYLNHLEQTQLQLSREPHPLPMMHINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDFTL Y+PH AI KV+V Sbjct: 241 SFKYEDFTLTGYDPHPAIKGKVAV 264 >gi|326201561|ref|ZP_08191432.1| LOW QUALITY PROTEIN: thymidylate synthase [Clostridium papyrosolvens DSM 2782] gi|325988161|gb|EGD48986.1| LOW QUALITY PROTEIN: thymidylate synthase [Clostridium papyrosolvens DSM 2782] Length = 264 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL +H++ G + DRTG GT STFGYQMRFDL KGFPLLTTK +H KS++HELL Sbjct: 1 MQQYLDLCKHILNNGIKKEDRTGTGTISTFGYQMRFDLQKGFPLLTTKNLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ ++ Sbjct: 61 WFISGETNIKYLKENGVSIWDEWADENGDLGPVYGHQWRSWSTPDGRSIDQLKGVLEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVS+WNV+ I+KMALPPCHC +QFYV NG LSC LYQRS DVF+G+PFNIAS Sbjct: 121 NNPDSRRLIVSSWNVSDIEKMALPPCHCFYQFYVINGTLSCMLYQRSADVFIGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+L TMM+A G + GEF+HTLGD H+Y NH EQ +LQLSR R LP+M INP++ DL Sbjct: 181 YALFTMMIAQSCGLKAGEFVHTLGDAHIYLNHIEQVNLQLSRDTRALPKMNINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+Y DFTL Y+PH I V+V Sbjct: 241 DFKYSDFTLTDYDPHPNIKGAVAV 264 >gi|260591057|ref|ZP_05856515.1| thymidylate synthase [Prevotella veroralis F0319] gi|260536922|gb|EEX19539.1| thymidylate synthase [Prevotella veroralis F0319] Length = 264 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G + DRTG GT S FG QMRF+L GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLDLLSRILNEGVHKGDRTGTGTLSVFGNQMRFNLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL HGV IW+EWAD+ G+LGP+YG QWRSWPDY G IDQI++++ ++ Sbjct: 61 WFLRGDTNIHYLQEHGVRIWNEWADEHGDLGPVYGHQWRSWPDYKGGTIDQITNVLDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPNSRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY+NH EQA LQL+R+PR LP+M INP++ DL Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYSNHLEQAKLQLTRTPRPLPKMKINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+YEDF L Y P+ I A+V+V Sbjct: 241 AFKYEDFELVDYNPYPHISAEVAV 264 >gi|90419201|ref|ZP_01227111.1| thymidylate synthase [Aurantimonas manganoxydans SI85-9A1] gi|90336138|gb|EAS49879.1| thymidylate synthase [Aurantimonas manganoxydans SI85-9A1] Length = 264 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 176/264 (66%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V++ GSDR DRTG GTRS FG+QMRFDL+ GFP+LTTKK+HWKSVVHELL Sbjct: 1 MRQYLDLLTRVMETGSDRPDRTGTGTRSVFGHQMRFDLADGFPMLTTKKLHWKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL+ +GV IWDEWAD+ G+LGP+YG QWRSWPDYDG IDQI+ +V+++R Sbjct: 61 WFLKGDTNIAYLNANGVRIWDEWADEHGDLGPVYGAQWRSWPDYDGGHIDQIAKVVEAIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWN AL+D+MALPPCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RTPQSRRLVVSAWNPALVDEMALPPCHCLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + G+F+HTLGD HLY+NH EQA LQL+R+P LP + +NP I DL Sbjct: 181 YALLTAMVAQATGLKPGDFVHTLGDAHLYSNHVEQAQLQLTRTPLPLPTLTLNPAIDDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++D L YE H I AKV+V Sbjct: 241 AFGFDDIALEGYEAHPHIKAKVAV 264 >gi|221314417|ref|ZP_03596222.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319340|ref|ZP_03600634.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. JH642] Length = 267 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 4 MKQYKDFCRHVLEHGEKKGDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 64 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 123 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 124 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 183 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTM++A V G + GEFIHT GDVH+Y NH EQ +LQL R R LPQ+ + + Sbjct: 184 YALLTMIIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLERDVRPLPQLRFARKVDSIF 243 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF + Y+PH I VSV Sbjct: 244 NFAFEDFIIEDYDPHPHIKGAVSV 267 >gi|308173974|ref|YP_003920679.1| thymidylate synthase B [Bacillus amyloliquefaciens DSM 7] gi|307606838|emb|CBI43209.1| thymidylate synthase B [Bacillus amyloliquefaciens DSM 7] gi|328553100|gb|AEB23592.1| thymidylate synthase [Bacillus amyloliquefaciens TA208] gi|328912128|gb|AEB63724.1| thymidylate synthase B [Bacillus amyloliquefaciens LL3] Length = 264 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS ++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R R LP++ N+ + Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF + Y+PH I VSV Sbjct: 241 DFAFEDFIIEDYDPHPHIKGAVSV 264 >gi|288926918|ref|ZP_06420817.1| thymidylate synthase [Prevotella buccae D17] gi|288336316|gb|EFC74698.1| thymidylate synthase [Prevotella buccae D17] Length = 264 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR ++ G+ + DRTG GT S FG+QMRF+L +G PLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLRRILDEGTPKGDRTGTGTLSVFGHQMRFNLEEGLPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LGP+YG QWRSWPDY G IDQI +++ ++ Sbjct: 61 WFLKGDTNVRYLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWN A +D MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HTPDSRRMMVSAWNPAEVDDMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHT GD HLY NH QA LQL+R+PR LP M +NP + L Sbjct: 181 YALLTMMMAQVTGLRPGDFIHTTGDTHLYQNHLSQARLQLTRTPRPLPTMRLNPEVKSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDFTL +Y+P+ I A VSV Sbjct: 241 DFRFEDFTLENYDPYDHIKATVSV 264 >gi|282881638|ref|ZP_06290301.1| thymidylate synthase [Prevotella timonensis CRIS 5C-B1] gi|281304397|gb|EFA96494.1| thymidylate synthase [Prevotella timonensis CRIS 5C-B1] Length = 264 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 165/264 (62%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+ ++ G ++ DRTG GT+S FG+QMRF++ GFPLLTTKK+H KS+++ELL Sbjct: 1 MQPYLNLLQRILDEGIEKTDRTGTGTKSIFGHQMRFNMEDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGV IWDEWAD+DG LGP+YG QWRSWPDY+G IDQI +++ ++ Sbjct: 61 WFLKGDTNIKYLKEHGVRIWDEWADEDGNLGPVYGHQWRSWPDYNGGTIDQIQNVINLIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +V+AWN A I++MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HHPDSRRMMVTAWNPAEIEQMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q GEFIHT GD HLY NH EQA LQL+R+PRTLPQM +NP++ L Sbjct: 181 YALLLQMMAQVTGLQVGEFIHTTGDTHLYLNHIEQAKLQLTRTPRTLPQMKLNPDVKSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L++Y P I A V+V Sbjct: 241 DFQYEDFELQNYNPWPHIKADVAV 264 >gi|327313463|ref|YP_004328900.1| thymidylate synthase [Prevotella denticola F0289] gi|326946204|gb|AEA22089.1| thymidylate synthase [Prevotella denticola F0289] Length = 264 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL ++ G+ + DRTG GT S FG QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLNLLNRILTEGAQKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G LGP+YG QWRSWPDY G IDQIS++ + +R Sbjct: 61 WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQISNVEEMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HCPESRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFRYEDF L Y P I A+V+V Sbjct: 241 SFRYEDFELADYHPWPHISAEVAV 264 >gi|300021803|ref|YP_003754414.1| thymidylate synthase [Hyphomicrobium denitrificans ATCC 51888] gi|299523624|gb|ADJ22093.1| thymidylate synthase [Hyphomicrobium denitrificans ATCC 51888] Length = 264 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR V G + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H KS++ ELL Sbjct: 1 MQQYLDLLRRVRTEGVKKTDRTGTGTLSVFGHQMRFDLSEGFPLVTTKKLHVKSIIVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL + VSIWDEWAD +GELGP+YG QWR+W DG IDQI +V++L+ Sbjct: 61 WFLSGATNIEYLKANDVSIWDEWADPEGELGPVYGKQWRAWSAPDGETIDQIKEVVETLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A I +MAL PCHCL QFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRIIVSAWNPADIPRMALAPCHCLVQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NH EQADLQLSR+PR LP+M INP + + Sbjct: 181 YALLTMMMAQVTGLEPGEFVHTFGDAHLYLNHLEQADLQLSRTPRALPRMKINPAVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF+L Y+P I A V+V Sbjct: 241 DFKYEDFSLEGYDPWPHIKAPVAV 264 >gi|16079241|ref|NP_390065.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168] gi|221310096|ref|ZP_03591943.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168] gi|221323615|ref|ZP_03604909.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. SMY] gi|136604|sp|P11044|TYSY2_BACSU RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2; AltName: Full=Thymidylate synthase B; Short=TS B; Short=TSase B gi|143741|gb|AAA22852.1| thymidylate synthase B (thyB) [Bacillus subtilis] gi|1256640|gb|AAA96634.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168] gi|2634602|emb|CAB14100.1| thymidylate synthase B [Bacillus subtilis subsp. subtilis str. 168] Length = 264 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDFCRHVLEHGEKKGDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTM++A V G + GEFIHT GDVH+Y NH EQ +LQL R R LPQ+ + + Sbjct: 181 YALLTMIIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLERDVRPLPQLRFARKVDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF + Y+PH I VSV Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264 >gi|312113785|ref|YP_004011381.1| thymidylate synthase [Rhodomicrobium vannielii ATCC 17100] gi|311218914|gb|ADP70282.1| thymidylate synthase [Rhodomicrobium vannielii ATCC 17100] Length = 264 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 168/264 (63%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR V G+ R DRTG GT S FG Q+RFDL GFPL+TTKK+H KS+VHELL Sbjct: 1 MQTYLDLLRDVRDHGTRRDDRTGTGTLSLFGRQLRFDLEAGFPLVTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL +GVSIWDEWAD +G+LGP+YG QWRSWP+ D IDQI+ +++++R Sbjct: 61 WFLAGDTNTAYLKANGVSIWDEWADANGDLGPVYGAQWRSWPERDCGTIDQIAEVIRAIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR +VSAWN A + +MAL PCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TDPNSRRLVVSAWNPADLPRMALAPCHCLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM A V G + G+F+HT GDVHLY NH EQAD QL R PR LP+M +NP + + Sbjct: 181 YALLTMMAAQVTGLRPGDFVHTFGDVHLYLNHREQADEQLGREPRPLPRMTLNPAVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y DF L Y PH AI A V+V Sbjct: 241 DFAYADFKLEGYAPHPAIKAPVAV 264 >gi|325282128|ref|YP_004254670.1| Thymidylate synthase [Odoribacter splanchnicus DSM 20712] gi|324313937|gb|ADY34490.1| Thymidylate synthase [Odoribacter splanchnicus DSM 20712] Length = 264 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G+++ DRTG GT S FG+QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MRQYLDLLDRILSEGAEKTDRTGTGTISVFGHQMRFDLQAGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD DG+LG IYG QWRSWP DG +DQI+ +V ++ Sbjct: 61 WFLKGDTNVKYLQDHGVKIWNEWADADGDLGHIYGYQWRSWPRPDGTHLDQIAQVVHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN I+ MAL PCH LFQFYV GKLSCQLYQRS D FLG+PFNIAS Sbjct: 121 NNPDSRRLIVSAWNAGDIENMALAPCHALFQFYVVGGKLSCQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G Q GEF+HTLGD H+Y NH EQ LQLSR PR LPQM INP + D+L Sbjct: 181 YALLTLMMAQVCGLQPGEFVHTLGDAHIYLNHIEQVRLQLSREPRALPQMHINPAVKDIL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH I +SV Sbjct: 241 GFRYEDFELTGYDPHPHIKGAISV 264 >gi|255011158|ref|ZP_05283284.1| thymidylate synthase [Bacteroides fragilis 3_1_12] gi|313148970|ref|ZP_07811163.1| thymidylate synthase [Bacteroides fragilis 3_1_12] gi|313137737|gb|EFR55097.1| thymidylate synthase [Bacteroides fragilis 3_1_12] Length = 264 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRFDL +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLAEGTEKGDRTGTGTISVFGHQMRFDLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD+ G+LG IYG QWRSWP+YDG IDQIS V +++ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADEKGDLGHIYGYQWRSWPNYDGGFIDQISEAVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHTLGD H+Y NH EQ LQLSR PRTLPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGEFIHTLGDAHIYLNHLEQVKLQLSREPRTLPQMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L +Y+PH I KV+V Sbjct: 241 DFRFEDFELVNYDPHPHIAGKVAV 264 >gi|15616013|ref|NP_244318.1| thymidylate synthase [Bacillus halodurans C-125] gi|25091494|sp|Q9K7B5|TYSY_BACHD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|10176074|dbj|BAB07170.1| thymidylate synthase B [Bacillus halodurans C-125] Length = 264 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L RHV++ G++R DRTG GT S FGYQMRFDL +GFP++TTKK+H +S++HELL Sbjct: 1 MEQYLELCRHVLEHGTERSDRTGTGTISVFGYQMRFDLQEGFPVVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL +GV IW+EWAD++GELGP+YG QWRSW +G +DQIS +V++++ Sbjct: 61 WFLKGETNIAYLQENGVRIWNEWADENGELGPVYGKQWRSWEGANGKTVDQISQVVEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A I+ MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HQPDSRRLIVSAWNAAEIEDMALAPCHCLFQFYVQDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + GEF+HT GD H+Y NH EQ LQL+R PR LP+M +NP + L Sbjct: 181 YALLTKMIAQVCDLEEGEFVHTFGDAHIYLNHIEQVKLQLTREPRPLPEMRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L Y+PH I +VSV Sbjct: 241 DFTFDDFELVGYDPHPHIKGEVSV 264 >gi|298293052|ref|YP_003694991.1| thymidylate synthase [Starkeya novella DSM 506] gi|296929563|gb|ADH90372.1| thymidylate synthase [Starkeya novella DSM 506] Length = 264 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +LL V++ G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK+H +S++HELL Sbjct: 1 MRQYHELLERVLREGTRKDDRTGTGTLSLFGHQMRFDLAEGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL +GVSIWDEWAD +G+LGP+YG QWRSWPD G VIDQI+ ++ +R Sbjct: 61 WFLAGDTNIAYLKENGVSIWDEWADANGDLGPVYGHQWRSWPDGRGGVIDQIAQVLSDIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A + +MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADVPQMALPPCHCLFQFYVLDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HTLGD HLY NH EQA QLSR+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQVTGLKPGDFVHTLGDAHLYVNHVEQAHEQLSRAPRKLPALKLNPAVDDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|254429983|ref|ZP_05043690.1| thymidylate synthase [Alcanivorax sp. DG881] gi|196196152|gb|EDX91111.1| thymidylate synthase [Alcanivorax sp. DG881] Length = 277 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 168/277 (60%), Positives = 213/277 (76%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV + G+ + DRTG GT + FGYQMR+DLS+GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLRHVRENGTYKEDRTGTGTYAVFGYQMRYDLSQGFPMLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWD WA +GELGP+YG QWRSW DG VIDQIS +++ ++ Sbjct: 61 WFLSGDTNIRYLKENGVSIWDGWATPEGELGPVYGEQWRSWKTPDGGVIDQISEVLEEIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN A++ K ALPPCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 RNPDSRRLVVSAWNPAVLPDPSISPDANAAAGKQALPPCHCLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GD+FLG+PFNIASY+LLT+M+A V Q G+F+HTLGD HLY+NH EQAD QL+R+P L Sbjct: 181 GDIFLGVPFNIASYALLTLMMAQVCDLQPGDFVHTLGDAHLYSNHLEQADTQLARTPGPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +F ++DFT+ +YEP A I A V++ Sbjct: 241 PTMTLNPAVKDLFAFTFDDFTVSNYEPAAHIKAPVAI 277 >gi|1359501|emb|CAA90532.1| thymidylate synthetase [Bacillus amyloliquefaciens] Length = 282 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L GFP+LTTKK+H+KS+ HELL Sbjct: 19 MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQGGFPMLTTKKLHFKSIAHELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS ++ ++ Sbjct: 79 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 138 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 139 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 198 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R R LP++ N+ + Sbjct: 199 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 258 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF + Y+PH I VSV Sbjct: 259 DFAFEDFIIEDYDPHPHIKGAVSV 282 >gi|6686339|sp|P54081|TYSY2_BACAM RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2; AltName: Full=Thymidylate synthase B; Short=TS B; Short=TSase B Length = 264 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQGGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS ++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R R LP++ N+ + Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF + Y+PH I VSV Sbjct: 241 DFAFEDFIIEDYDPHPHIKGAVSV 264 >gi|92114690|ref|YP_574618.1| thymidylate synthase [Chromohalobacter salexigens DSM 3043] gi|123387366|sp|Q1QUD9|TYSY_CHRSD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91797780|gb|ABE59919.1| thymidylate synthase [Chromohalobacter salexigens DSM 3043] Length = 264 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV++ G ++ DRTG GT S FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MQPYLDLMRHVLENGVEKSDRTGTGTLSVFGHQMRFDLAAGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL + V IWDEWAD++G+LGP+YG QWRSWP DG +DQI+++V+ ++ Sbjct: 61 WFLRGDTNIAYLKENRVRIWDEWADENGDLGPVYGYQWRSWPRPDGGHVDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A GEF+HTLGD HLY NH EQA LQLSR PR LP++++NP + D+ Sbjct: 181 YALLTHMVAQACDLAPGEFVHTLGDAHLYLNHLEQARLQLSREPRALPRLVLNPRVKDVF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++D + Y+PH I A+V+V Sbjct: 241 AFTFDDIAIEDYDPHPHIKAEVAV 264 >gi|154686429|ref|YP_001421590.1| thymidylate synthase [Bacillus amyloliquefaciens FZB42] gi|166231688|sp|A7Z5T3|TYSY_BACA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|154352280|gb|ABS74359.1| ThyB [Bacillus amyloliquefaciens FZB42] Length = 264 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS ++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ID MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDHMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R R LP++ N+ + Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF + Y+PH I VSV Sbjct: 241 DFTFEDFIIEDYDPHPHIKGAVSV 264 >gi|311746545|ref|ZP_07720330.1| thymidylate synthase [Algoriphagus sp. PR1] gi|126575445|gb|EAZ79777.1| thymidylate synthase [Algoriphagus sp. PR1] Length = 264 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 165/264 (62%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ ++ G + DRTG GT+S FG+QMRFDLSKGFP++TTKK+H +S++ ELL Sbjct: 1 MKQYHDLMQKILDEGVTKGDRTGTGTKSIFGHQMRFDLSKGFPVVTTKKLHLRSIIIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GDSN++YL + VSIWDEWAD++G+LGP+YG QWR WPD G IDQI +++ ++ Sbjct: 61 WFLKGDSNINYLKENKVSIWDEWADENGDLGPVYGYQWRHWPDGKGGEIDQIKNLIHQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRRHIVSAWNVA +D+MALPPCH +FQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TKPDSRRHIVSAWNVADVDQMALPPCHTIFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+L TMM+A V + G+F+HT GD HLY+NH EQA LQLSR R LP M INP + D+ Sbjct: 181 YALFTMMIAQVCDLEVGDFVHTFGDAHLYSNHLEQAKLQLSREIRDLPTMKINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y+PH I A V+V Sbjct: 241 DFKYEDFELINYDPHPHIKAAVAV 264 >gi|313674832|ref|YP_004052828.1| thymidylate synthase [Marivirga tractuosa DSM 4126] gi|312941530|gb|ADR20720.1| thymidylate synthase [Marivirga tractuosa DSM 4126] Length = 264 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L++H++ G + DRTG GT S FGYQMRFDLS+GFP++TTKK+H +S++HELL Sbjct: 1 MKQYHELMKHILDKGVQKGDRTGTGTISVFGYQMRFDLSEGFPVVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++GELGP+YG QWR+WP DG IDQIS I+ ++ Sbjct: 61 WFLKGETNIKYLKENGVSIWDEWADENGELGPVYGSQWRNWPTPDGQHIDQISQIIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWNVA + MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NTPNSRRIMVSAWNVADVPNMALPPCHALFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+FIHTLGD HLY+NH EQ +LQLSR P LP+M INPN+ ++ Sbjct: 181 YALLTMMVAQVCDLEPGDFIHTLGDAHLYSNHLEQTELQLSREPYPLPKMKINPNVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y+ H I A V+V Sbjct: 241 DFKFEDFELVDYQYHPHIKAPVAV 264 >gi|288554022|ref|YP_003425957.1| thymidylate synthase [Bacillus pseudofirmus OF4] gi|288545182|gb|ADC49065.1| thymidylate synthase [Bacillus pseudofirmus OF4] Length = 264 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L HV+K G + DRTG GT STFGYQMRFDL++GFP LTTKK+H +S++HELL Sbjct: 1 MDQYLALCEHVLKNGETKSDRTGTGTISTFGYQMRFDLAEGFPALTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IW+EWAD++G+LGP+YG QWRSW +G V+DQIS +++ ++ Sbjct: 61 WFLKGDTNIGYLKENNVRIWNEWADENGDLGPVYGKQWRSWEGANGKVVDQISELIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ID+MAL PCHCLFQFYV++GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRLIVSAWNPAEIDEMALAPCHCLFQFYVNDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEF+HT GD H+Y+NH EQ LQL+R PR LP+M IN + + Sbjct: 181 YALLTMMIAQVTDLEPGEFVHTFGDAHIYSNHVEQVKLQLTREPRALPKMKINKEVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F EDF L Y+PH I +VSV Sbjct: 241 DFTIEDFELTDYDPHPHIKGEVSV 264 >gi|108764037|ref|YP_634079.1| thymidylate synthase [Myxococcus xanthus DK 1622] gi|108467917|gb|ABF93102.1| thymidylate synthase [Myxococcus xanthus DK 1622] Length = 267 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL HV+ G + DRTG GT S FG Q+RFDL++GFPLLTTKKVH KS++HELL Sbjct: 4 MQPYLSLLDHVLHHGVKKGDRTGTGTLSVFGPQLRFDLTQGFPLLTTKKVHTKSILHELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L GD+NV L GV+IWDEWA+ DG LGP+YG QWRSW +G IDQ+ ++V+ L+ Sbjct: 64 WMLAGDTNVHTLQAQGVTIWDEWANADGSLGPVYGHQWRSWTAPNGEHIDQMKALVEGLK 123 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHI+SAWNVA + M LPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 124 KNPDSRRHIISAWNVADLPSMKLPPCHVLFQFYVANGRLSCQLYQRSADLFLGLPFNIAS 183 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLTMM+A V G Q EFIHT+GD HLY NH EQA QLSR PR LP++ INP + DL Sbjct: 184 YSLLTMMVAQVTGLQAHEFIHTVGDAHLYLNHVEQAKTQLSREPRPLPRIHINPEVTDLF 243 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+YEDFTL Y+PH AI A V+V Sbjct: 244 AFKYEDFTLEGYDPHPAIKAPVAV 267 >gi|309812530|ref|ZP_07706278.1| thymidylate synthase [Dermacoccus sp. Ellin185] gi|308433508|gb|EFP57392.1| thymidylate synthase [Dermacoccus sp. Ellin185] Length = 264 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 168/264 (63%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY LLR ++ G+ + DRTG GT S FG+QMRFDLS+GFP+LTTKK+H +S+ ELL Sbjct: 1 MEQYHALLRRILDEGTRKDDRTGTGTLSVFGHQMRFDLSQGFPVLTTKKLHLRSIFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV++LH +SIWDEWAD DG+LGPIYG QWRSWP +G IDQI+ +V+S+R Sbjct: 61 WFLRGDTNVAWLHERKISIWDEWADPDGDLGPIYGHQWRSWPTPNGETIDQIARVVESVR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA +D MALPPCH +FQFYV +GKLSCQLYQRSGDVFLG+PFNIAS Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHTMFQFYVADGKLSCQLYQRSGDVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G G+F+HTLGD HLY NH +QA LQL+R+P+TLP +++NP++ L Sbjct: 181 YALLTHMVAQVTGLAVGDFVHTLGDAHLYVNHLDQARLQLTRTPKTLPTLVLNPDVTALD 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D L YE AI A+V+V Sbjct: 241 AFELDDIRLDGYEADPAIKAQVAV 264 >gi|303237299|ref|ZP_07323869.1| thymidylate synthase [Prevotella disiens FB035-09AN] gi|302482686|gb|EFL45711.1| thymidylate synthase [Prevotella disiens FB035-09AN] Length = 264 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL +I G + DRTG GT S FG QMRF+L +GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRIITDGVQKGDRTGTGTLSVFGNQMRFNLQEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++GELGP+YG QWRSWP+Y G IDQIS +V ++ Sbjct: 61 WFLKGDTNVKYLQEHGVRIWNEWADENGELGPVYGHQWRSWPNYKGGTIDQISDVVDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A ++ MALPPCHCLFQFYV N KLS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPNSRRMLVTAWNPAEVEDMALPPCHCLFQFYVANDKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G + G+F++T GD HLY NH EQA LQL+R PR LP+M INPN+ + Sbjct: 181 YALLLQMMAQATGLEVGDFVYTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPNVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y PH I A+VSV Sbjct: 241 DFQYEDFELIDYNPHPHIAAEVSV 264 >gi|294673977|ref|YP_003574593.1| thymidylate synthase [Prevotella ruminicola 23] gi|294472139|gb|ADE81528.1| thymidylate synthase [Prevotella ruminicola 23] Length = 264 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD+L ++ G+ + DRTG GT S FG Q R++L GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDILNRILTEGTQKGDRTGTGTISIFGTQSRYNLDDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++GELGP+YG QWRSWPDY+G IDQI ++ L+ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADENGELGPVYGHQWRSWPDYNGGTIDQIQYVLDQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++KMALPPCH +FQFYV + +LS QLYQRS D FLG+PFNIAS Sbjct: 121 NNPNSRRMIVSAWNVAEVNKMALPPCHTIFQFYVADDRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V GF+ G+FIHT GD HLY NH EQA LQL+R PR LP+MIINP++ +L Sbjct: 181 YALLLQMMAQVTGFKAGDFIHTTGDTHLYLNHIEQAKLQLTREPRPLPKMIINPDVKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF L Y+PH I A+VSV Sbjct: 241 DFTFEDFQLEGYDPHPHIKAEVSV 264 >gi|302346549|ref|YP_003814847.1| thymidylate synthase [Prevotella melaninogenica ATCC 25845] gi|302150410|gb|ADK96671.1| thymidylate synthase [Prevotella melaninogenica ATCC 25845] Length = 264 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL ++ G+ + DRTG GT S FG+QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLNLLNRILTEGTQKGDRTGTGTLSIFGHQMRFDLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL HGV IW+EWAD++GELGP+YG QWRSWPDY G IDQI ++V+ ++ Sbjct: 61 WFLRGDTNVRYLQEHGVRIWNEWADENGELGPVYGHQWRSWPDYKGGTIDQIKNVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A ++ MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPNSRRMLVTAWNPAEVEDMALPPCHCLFQFYVADGRLSLQLYQRSADSFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLLQMIAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+P I V+V Sbjct: 241 DFKYEDFELIGYDPLPHIPGVVAV 264 >gi|319786162|ref|YP_004145637.1| thymidylate synthase [Pseudoxanthomonas suwonensis 11-1] gi|317464674|gb|ADV26406.1| thymidylate synthase [Pseudoxanthomonas suwonensis 11-1] Length = 264 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL HV+ G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLELLAHVLGHGTDKPDRTGTGTRSVFGWQMRFDLRQGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL + VSIWDEWAD GELGP+YG QWR W DG+ IDQI +V+ ++ Sbjct: 61 WFLKGETNIAYLKENKVSIWDEWADGQGELGPVYGKQWRRWTGSDGSEIDQIRWVVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + KMAL PCH LFQFYV +G+LSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLLVSAWNVADLPKMALMPCHTLFQFYVADGRLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QLSR PR LP++ +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLQLNPEVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYED + Y+P AI A V+V Sbjct: 241 DFRYEDIAIEGYDPAPAIKAPVAV 264 >gi|194017003|ref|ZP_03055616.1| thymidylate synthase [Bacillus pumilus ATCC 7061] gi|194011609|gb|EDW21178.1| thymidylate synthase [Bacillus pumilus ATCC 7061] Length = 264 Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L RHV++ G ++ DRTG GT STFGYQMRFDL +GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYKELCRHVLQHGDEKGDRTGTGTISTFGYQMRFDLQEGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELG +YG QWRSW DG +DQI+ ++ + Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGELGRVYGAQWRSWASGDGETVDQITKLIHDIE 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ID+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPNSRRLIVSAWNPAEIDQMALPPCHCLFQFYVSHGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEF+HTLGD H+Y NH Q +QL R RTLPQ+ I ++ + Sbjct: 181 YALLTMMIAKVTNLEPGEFVHTLGDAHIYQNHLPQVKMQLEREERTLPQLRITRDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L +Y+PH I +VSV Sbjct: 241 DFTFDDFVLENYDPHPHIKGEVSV 264 >gi|315608816|ref|ZP_07883792.1| thymidylate synthase [Prevotella buccae ATCC 33574] gi|315249510|gb|EFU29523.1| thymidylate synthase [Prevotella buccae ATCC 33574] Length = 264 Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR ++ G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLRRILDEGTPKGDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LGP+YG QWRSWPDY G IDQI +++ + Sbjct: 61 WFLKGDTNVRYLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLDQIM 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWN A +D MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 RTPDSRRMMVSAWNPAEVDDMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+FIHT GD HLY NH QA LQL+R+PR LP M +NP + L Sbjct: 181 YALLTMMMAQVTRLRPGDFIHTTGDTHLYLNHLSQARLQLTRTPRPLPTMRLNPEVKSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDFTL +Y+P+ I A VSV Sbjct: 241 DFRFEDFTLENYDPYDHIKATVSV 264 >gi|157692684|ref|YP_001487146.1| thymidylate synthase [Bacillus pumilus SAFR-032] gi|166991227|sp|A8FEB9|TYSY_BACP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157681442|gb|ABV62586.1| thymidylate synthase B [Bacillus pumilus SAFR-032] Length = 264 Score = 367 bits (941), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L RHV++ G ++ DRTG GT STFGYQMRFDL +GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYKELCRHVLQHGDEKGDRTGTGTISTFGYQMRFDLQEGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELG +YG QWRSW DG +DQI+ ++ + Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGELGRVYGAQWRSWASGDGETVDQITKLIHDIE 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ID+MALPPCHCLFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPNSRRLIVSAWNPGEIDQMALPPCHCLFQFYVSNGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEF+HTLGD H+Y NH Q ++QL R R LPQ+ I ++ + Sbjct: 181 YALLTMMIAKVTNLEPGEFVHTLGDAHIYQNHLPQVNMQLEREERALPQLRITRDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L +Y+PH I +VSV Sbjct: 241 DFTFDDFVLENYDPHPHIKGEVSV 264 >gi|171914370|ref|ZP_02929840.1| thymidylate synthase [Verrucomicrobium spinosum DSM 4136] Length = 264 Score = 367 bits (941), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +Y LL+ V++ G+ R+DRTGVG S FG Q R+DLS GFP+LTTKK+H +S++HELL Sbjct: 1 MLEYQRLLKKVLEHGNFRQDRTGVGAYSVFGEQSRYDLSAGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH + V+IWDEWAD++G LGP+YG QWR W DG V DQI+ ++ S++ Sbjct: 61 WFLKGDTNIKYLHENKVTIWDEWADEEGNLGPVYGAQWRRWQGADGLVHDQIADVIASIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +PYSRRHIVSAWNVA I +MALPPCH +FQF+VD G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPYSRRHIVSAWNVARIGEMALPPCHLMFQFFVDQGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V Q GEF+HT GD+HLY NH +QA LQL R PR+LP M INP + D+ Sbjct: 181 YALLTMMVAQVCDLQPGEFVHTFGDLHLYANHLDQARLQLEREPRSLPVMKINPEVRDID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +Y+P AI A+++V Sbjct: 241 GFKFEDFTLENYDPWPAIKAEIAV 264 >gi|87307092|ref|ZP_01089238.1| thymidylate synthase [Blastopirellula marina DSM 3645] gi|87290465|gb|EAQ82353.1| thymidylate synthase [Blastopirellula marina DSM 3645] Length = 264 Score = 367 bits (941), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G + DRTG GT S FG+QMRF L+ GFP +TTKK+H +S++HELL Sbjct: 1 MRQYLDLMQRILDEGVRKEDRTGTGTLSIFGHQMRFRLADGFPAVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV+YL + VSIWDEWAD+ GELGP+YG QWRSWP DG IDQI+++++ ++ Sbjct: 61 WFLQGATNVAYLRENKVSIWDEWADEAGELGPVYGYQWRSWPTPDGGHIDQITNLIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA + +M LPPCH LFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVADVPRMKLPPCHLLFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HT GD HLY NH +Q LQLSR PR LP M INP + DLL Sbjct: 181 YALLTMMVAQVTGLEPGDFVHTFGDAHLYTNHMDQTQLQLSREPRPLPTMRINPAVTDLL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L +Y+PH I A V+V Sbjct: 241 KFRFEDFELINYDPHPHISAPVAV 264 >gi|307565583|ref|ZP_07628063.1| thymidylate synthase [Prevotella amnii CRIS 21A-A] gi|307345742|gb|EFN91099.1| thymidylate synthase [Prevotella amnii CRIS 21A-A] Length = 264 Score = 366 bits (940), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+ ++K G R DRTGVGT S FG+QM F++ GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYQDLLKRILKEGVKREDRTGVGTLSIFGHQMHFNMEDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LGP+YG QWRSWPDY G IDQI +++ ++ Sbjct: 61 WFLKGDTNVKYLQEHGVKIWNEWADENGDLGPVYGHQWRSWPDYKGGSIDQIKNVLDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +V+AWN A +D+MALPPCHCLFQFYV GKLS QLYQRS D FLG+PFNIAS Sbjct: 121 HSPSSRRMLVTAWNPAEVDEMALPPCHCLFQFYVAEGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLL M+A V G + GEFIHT GD H+Y NH EQ LQL+R+PR LP++IINP++ DL Sbjct: 181 YSLLLHMMAQVTGLKVGEFIHTTGDTHIYLNHLEQVKLQLTRTPRPLPKIIINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF Y+DF + Y P+ I V+V Sbjct: 241 SFHYDDFKIEDYNPYPHIPGTVAV 264 >gi|118594685|ref|ZP_01552032.1| thymidylate synthase [Methylophilales bacterium HTCC2181] gi|118440463|gb|EAV47090.1| thymidylate synthase [Methylophilales bacterium HTCC2181] Length = 264 Score = 366 bits (940), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQYLDLLRHV G+ ++DRTG GT S FGYQMRFDL++GFPLLTTKK+H KSV++ELL Sbjct: 1 MHQYLDLLRHVKSNGTVKKDRTGTGTISVFGYQMRFDLNEGFPLLTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV +L +G+SIWDEWAD G LGP+YG QWRSW ++G IDQI ++ ++ Sbjct: 61 WFLTGDTNVKFLKDNGISIWDEWADDKGNLGPVYGHQWRSWSSHNGESIDQIKILIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ID+M LPPCH FQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 VNPDSRRLIVSAWNVADIDQMKLPPCHAFFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HTLGD H+Y NH EQ QLSR P+TLP M +N +I ++ Sbjct: 181 YALLTMMIAQVCGLRLGEFVHTLGDAHIYLNHEEQVTQQLSREPKTLPIMTLNKSIDNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF+L Y+P I A V+V Sbjct: 241 DFTFDDFSLEGYDPEPLIKAPVAV 264 >gi|110835205|ref|YP_694064.1| thymidylate synthase [Alcanivorax borkumensis SK2] gi|123345289|sp|Q0VM06|TYSY_ALCBS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|110648316|emb|CAL17792.1| thyA [Alcanivorax borkumensis SK2] Length = 277 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 166/277 (59%), Positives = 212/277 (76%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV + G+ + DRTG GT + FGYQMR+DLS+GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLRHVREHGTYKEDRTGTGTYAVFGYQMRYDLSQGFPMLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWD WA +GELGP+YG QWRSW DG VIDQI+ +++ ++ Sbjct: 61 WFLSGDTNIRYLKENGVSIWDGWATPEGELGPVYGEQWRSWKTADGGVIDQITEVLKEIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN A++ K ALPPCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 RNPDSRRLVVSAWNPAVLPDPSISPDANAAAGKQALPPCHCLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GD+FLG+PFNIASY+LLT+M+A V Q G+F+HTLGD HLY+NH EQAD QL+R+P L Sbjct: 181 GDIFLGVPFNIASYALLTLMMAQVCDLQPGDFVHTLGDAHLYSNHLEQADTQLARTPGPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +F ++DFT+ +Y P A I A V++ Sbjct: 241 PTMTLNPAVKDLFAFTFDDFTVSNYNPDAHIKAPVAI 277 >gi|150004500|ref|YP_001299244.1| thymidylate synthase [Bacteroides vulgatus ATCC 8482] gi|166231690|sp|A6L1Q8|TYSY_BACV8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|149932924|gb|ABR39622.1| putative thymidylate synthase B [Bacteroides vulgatus ATCC 8482] Length = 264 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 168/264 (63%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRILTEGVHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD +G+LG IYG QWRSWPDY+G IDQIS +++++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV NG+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+F+HTLGD H+Y NH EQ LQLSR PR LPQM INP+I D+ Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDF L +Y+P I KVSV Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264 >gi|254882766|ref|ZP_05255476.1| thymidylate synthase [Bacteroides sp. 4_3_47FAA] gi|319643926|ref|ZP_07998501.1| thymidylate synthase [Bacteroides sp. 3_1_40A] gi|254835559|gb|EET15868.1| thymidylate synthase [Bacteroides sp. 4_3_47FAA] gi|317384450|gb|EFV65417.1| thymidylate synthase [Bacteroides sp. 3_1_40A] Length = 264 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 168/264 (63%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRILTEGIHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD +G+LG IYG QWRSWPDY+G IDQIS +++++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV NG+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+F+HTLGD H+Y NH EQ LQLSR PR LPQM INP+I D+ Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDF L +Y+P I KVSV Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264 >gi|325269975|ref|ZP_08136584.1| thymidylate synthase [Prevotella multiformis DSM 16608] gi|324987698|gb|EGC19672.1| thymidylate synthase [Prevotella multiformis DSM 16608] Length = 264 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL ++ G + DRTG GT S FG QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLNLLDRILTEGIQKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G LGP+YG QWRSWPDY G IDQI ++V+ +R Sbjct: 61 WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQIKNVVEMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 NNPNSRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEF+HT GD HLY NH EQA LQL+R P LP+M INP + D+ Sbjct: 181 YALLLQMMAQVTGLEAGEFVHTTGDTHLYLNHLEQARLQLTREPHPLPKMKINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF YEDF L Y P I A+VSV Sbjct: 241 SFEYEDFELTDYHPWPHISAEVSV 264 >gi|329961539|ref|ZP_08299620.1| thymidylate synthase [Bacteroides fluxus YIT 12057] gi|328531751|gb|EGF58580.1| thymidylate synthase [Bacteroides fluxus YIT 12057] Length = 264 Score = 365 bits (938), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 165/264 (62%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNMEEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLKGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NGKLS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ LQL+R PR LPQM INP++ D+ Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLTREPRALPQMQINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y PH I KV+V Sbjct: 241 DFKFEDFELVNYNPHPHIAGKVAV 264 >gi|89100587|ref|ZP_01173446.1| thymidylate synthase [Bacillus sp. NRRL B-14911] gi|89084691|gb|EAR63833.1| thymidylate synthase [Bacillus sp. NRRL B-14911] Length = 264 Score = 365 bits (938), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L RHV++ G+ + DRTG GT STFGYQMRFDL +GFPL+TTKK+H +S++HELL Sbjct: 1 MEQYLQLCRHVLEKGTIKEDRTGTGTISTFGYQMRFDLKEGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW+EWAD++G LGP+YG QWRSW DG +DQIS ++ S++ Sbjct: 61 WFLNGDTNVKYLQDNGVRIWNEWADEEGNLGPVYGHQWRSWTGADGKTVDQISELISSIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IV+AWNV+ I MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVNAWNVSEIGNMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + GEFIH+ GDVH+Y NH EQ +LQLSR P LPQ+ + D+ Sbjct: 181 YALLTHMVAHVCDLEPGEFIHSFGDVHIYRNHLEQVNLQLSREPFKLPQLKFARKVEDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDF L YE H I VSV Sbjct: 241 SFKYEDFILEGYESHPHIKGVVSV 264 >gi|329957787|ref|ZP_08298262.1| thymidylate synthase [Bacteroides clarus YIT 12056] gi|328522664|gb|EGF49773.1| thymidylate synthase [Bacteroides clarus YIT 12056] Length = 264 Score = 365 bits (938), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQLSR PRTLPQM INP++ + Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPRTLPQMRINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YEDF L +Y+PH I KV+V Sbjct: 241 DFTYEDFELVNYDPHPHIAGKVAV 264 >gi|212693595|ref|ZP_03301723.1| hypothetical protein BACDOR_03112 [Bacteroides dorei DSM 17855] gi|237708754|ref|ZP_04539235.1| thymidylate synthase [Bacteroides sp. 9_1_42FAA] gi|237724195|ref|ZP_04554676.1| thymidylate synthase [Bacteroides sp. D4] gi|265755979|ref|ZP_06090446.1| thymidylate synthase [Bacteroides sp. 3_1_33FAA] gi|212663848|gb|EEB24422.1| hypothetical protein BACDOR_03112 [Bacteroides dorei DSM 17855] gi|229437383|gb|EEO47460.1| thymidylate synthase [Bacteroides dorei 5_1_36/D4] gi|229457180|gb|EEO62901.1| thymidylate synthase [Bacteroides sp. 9_1_42FAA] gi|263234057|gb|EEZ19658.1| thymidylate synthase [Bacteroides sp. 3_1_33FAA] Length = 264 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRILTEGVHKEDRTGTGTISIFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD +G+LG IYG QWRSWPDY+G IDQIS +++++ Sbjct: 61 WFLQGDTNIKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV NG+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+F+HTLGD H+Y NH EQ LQLSR PR LPQM INP+I D+ Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDF L +Y+P I KVSV Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264 >gi|288802399|ref|ZP_06407838.1| thymidylate synthase [Prevotella melaninogenica D18] gi|288334927|gb|EFC73363.1| thymidylate synthase [Prevotella melaninogenica D18] Length = 264 Score = 365 bits (937), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL ++ G+ + DRT GT S FG+QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLNLLNRILTEGTQKGDRTRTGTLSIFGHQMRFDLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL HGV IW+EWAD++GELGP+YG QWRSWPDY G IDQI ++V+ ++ Sbjct: 61 WFLRGDTNVRYLQEHGVRIWNEWADENGELGPVYGHQWRSWPDYKGGTIDQIKNVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR +V+AWN A ++ MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HDPDSRRMLVTAWNPAEVEDMALPPCHCLFQFYVADGRLSLQLYQRSADSFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLLQMIAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+P I V+V Sbjct: 241 DFKYEDFELIGYDPLPHIPGVVAV 264 >gi|120434655|ref|YP_956876.1| thymidylate synthase [Gramella forsetii KT0803] gi|166231704|sp|A0LY29|TYSY_GRAFK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|117576805|emb|CAL65274.1| thymidylate synthase [Gramella forsetii KT0803] Length = 274 Score = 365 bits (936), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 165/277 (59%), Positives = 212/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLLKHVLEQGAQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD +G+LGP+YG QWR+W +G IDQI IV SL+ Sbjct: 61 WFLKGDTNIEYLKENGVRIWNEWADDNGDLGPVYGHQWRNW---NGEEIDQIKEIVHSLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 HNPNSRRMLVSAWNPSVLPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQVELQLSREPRQL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP + D+ F++EDFTL Y+PH I AKV++ Sbjct: 238 PIMKINPEVKDIFDFKFEDFTLEDYDPHPGIKAKVAI 274 >gi|226946823|ref|YP_002801896.1| thymidylate synthase [Azotobacter vinelandii DJ] gi|259550764|sp|C1DK16|TYSY_AZOVD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226721750|gb|ACO80921.1| Thymidylate synthase protein [Azotobacter vinelandii DJ] Length = 264 Score = 365 bits (936), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 169/264 (64%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V + G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK H KS+VHELL Sbjct: 1 MKQYLDLMRLVREHGTFKSDRTGTGTFSVFGHQMRFDLAEGFPLVTTKKCHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD +G+LGP+YG QWRSWP DG IDQI+++V +R Sbjct: 61 WFLKGDTNIRYLKENGVSIWDEWADGNGDLGPVYGYQWRSWPAPDGRHIDQIANVVNMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+M LPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 DNPDSRRLIVSAWNPALIDEMKLPPCHALFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL +M+A V G GEF+ T GD HLY NH EQADLQLSR P LP M ++P++ DL Sbjct: 181 YALLILMMAQVTGLAPGEFVWTGGDCHLYANHLEQADLQLSREPLPLPTMQLDPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L Y+ H I A V++ Sbjct: 241 AFRFEDFELVGYQSHPHIKAPVAI 264 >gi|294778259|ref|ZP_06743685.1| thymidylate synthase [Bacteroides vulgatus PC510] gi|294447887|gb|EFG16461.1| thymidylate synthase [Bacteroides vulgatus PC510] Length = 264 Score = 365 bits (936), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRILTEGVHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD +G+LG IYG QWRSWPDY+G IDQIS +++++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV NG+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+F+HTLGD H+Y NH EQ LQLSR PR LPQM INP+I ++ Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDF L +Y+P I KVSV Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264 >gi|297583464|ref|YP_003699244.1| thymidylate synthase [Bacillus selenitireducens MLS10] gi|297141921|gb|ADH98678.1| thymidylate synthase [Bacillus selenitireducens MLS10] Length = 264 Score = 364 bits (935), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L RHV++ G+ + DRTG GT STFGYQMRFDL GFP+LTTKK+ ++++HELL Sbjct: 1 MENYLNLCRHVLEHGTAKDDRTGTGTISTFGYQMRFDLQDGFPVLTTKKMALRAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++G++N+ YL H V IWDEWAD++G+LGP+YG QWRSWP DG IDQ+ ++++++ Sbjct: 61 WFIKGETNIRYLKEHNVRIWDEWADENGDLGPVYGRQWRSWPTPDGRTIDQLREVIEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRH+++AWNV +D+MAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPDSRRHVINAWNVGELDQMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLTMM+A G + GEFIHT GDVH+Y NH EQ LQL+R+P P+M +NP+ + Sbjct: 181 YSLLTMMVAQECGLEPGEFIHTFGDVHIYQNHLEQVRLQLTRTPGQKPEMRLNPDKKRIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F EDF L Y+PH AI +VSV Sbjct: 241 DFTIEDFELIGYDPHPAIKGEVSV 264 >gi|294788691|ref|ZP_06753933.1| thymidylate synthase [Simonsiella muelleri ATCC 29453] gi|294483568|gb|EFG31253.1| thymidylate synthase [Simonsiella muelleri ATCC 29453] Length = 264 Score = 364 bits (935), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 173/264 (65%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L+++V++ G+D+ DRTG GTRS FGYQMRFDL+ GFPLLTTKK+H +S++HELL Sbjct: 1 MQTYLNLIQYVLEHGTDKSDRTGTGTRSVFGYQMRFDLANGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL + VSIWDEWAD++G+LG +YG QWRSW +G IDQIS I+Q ++ Sbjct: 61 WFLKGETNIKYLKDNNVSIWDEWADENGDLGRVYGAQWRSWQTPNGKSIDQISQIIQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QNPDSRRLIVSAWNPAEVDNMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V Q GEFIHTLGD H+YNNHFEQA LQL+R PR LP++ IN I DL Sbjct: 181 YALLTMMMAQVCKLQAGEFIHTLGDAHIYNNHFEQAKLQLTREPRRLPEIKINDKIKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y PH I A+VSV Sbjct: 241 EFKYEDFELINYNPHPHIKAEVSV 264 >gi|304309792|ref|YP_003809390.1| Thymidylate synthase [gamma proteobacterium HdN1] gi|301795525|emb|CBL43723.1| Thymidylate synthase [gamma proteobacterium HdN1] Length = 277 Score = 364 bits (934), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 171/277 (61%), Positives = 206/277 (74%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV G + DRTG GT S FGYQMRFDL+ GFPL+TTKKVH KS++HELL Sbjct: 1 MKQYLDLLRHVRDHGVRKSDRTGTGTLSVFGYQMRFDLAAGFPLVTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ YL HGVSIW+EWA + GELGP+YG QWRSW G +DQI+ ++ +R Sbjct: 61 WFLRGETNIQYLTDHGVSIWNEWATESGELGPVYGKQWRSWDGPHGETVDQIAWLIDEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN AL+ ALPPCHCLFQFYV GKLSCQLYQRS Sbjct: 121 NNPDSRRMVVSAWNPALLPDTRVSPRQNAANGLQALPPCHCLFQFYVAEGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GDVFLG+PFNIASY+LLT+M+A V G Q GEF+H+ GDVHLY NH EQA+ QL+R+P L Sbjct: 181 GDVFLGVPFNIASYALLTLMVAQVTGLQPGEFVHSFGDVHLYLNHLEQAETQLARAPLAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP I ++ FRY+DFTL Y P+ I A V+V Sbjct: 241 PKMQLNPAITNVFDFRYDDFTLTDYAPYDPIRAPVAV 277 >gi|260063783|ref|YP_003196863.1| thymidylate synthase [Robiginitalea biformata HTCC2501] gi|88783228|gb|EAR14401.1| thymidylate synthase [Robiginitalea biformata HTCC2501] Length = 274 Score = 364 bits (934), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 168/277 (60%), Positives = 212/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLRHV+K G ++ DRTG GT S FGYQMRFDLS+GFPL+TTKK+H KSV+HELL Sbjct: 1 MKQYHDLLRHVLKEGLEKTDRTGTGTVSVFGYQMRFDLSEGFPLVTTKKIHVKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL +GV IW+EWAD++G+LGP+YG QWR+W + +DQI+ +V+++R Sbjct: 61 WFLRGDTNIAYLKENGVRIWNEWADENGDLGPVYGHQWRNW---NSEGLDQIAQVVETIR 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +V+AWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPDSRRMLVAAWNPSVLPDTSRTFAENVADGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLT+M+A V Q GEFIHT GD H+YNNH EQ LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALLTLMVAQVCNLQPGEFIHTFGDAHIYNNHREQIRLQLSREPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +FRYEDFTL +Y+PH I +V+V Sbjct: 238 PTMELNPEVTDLFAFRYEDFTLHNYDPHPLIRGRVAV 274 >gi|255691312|ref|ZP_05414987.1| thymidylate synthase [Bacteroides finegoldii DSM 17565] gi|260622954|gb|EEX45825.1| thymidylate synthase [Bacteroides finegoldii DSM 17565] Length = 264 Score = 364 bits (934), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 165/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLEDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD +G+LG IYG QWRSWPDY+G IDQIS V++++ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISETVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ LQL+R PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLTREPRPLPQMNINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264 >gi|205373119|ref|ZP_03225923.1| thymidylate synthase [Bacillus coahuilensis m4-4] Length = 264 Score = 363 bits (933), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L ++K G + DRTG GT STFGYQMR++L GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLHLCEEILKNGVKKEDRTGTGTISTFGYQMRYNLQDGFPLVTTKKLHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD++GELGP+YG QWRSW +G IDQIS ++ ++ Sbjct: 61 WFLKGDTNIKYLQDNGVRIWNEWADENGELGPVYGHQWRSWTGSNGETIDQISQLIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ MALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QNPNSRRLIVSAWNVADVNHMALPPCHCLFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V + G+FIHTLGD H+Y+NH EQ +LQL+R + LP+M +NP I D+ Sbjct: 181 YALLTLMIAQVCDLEPGDFIHTLGDAHIYSNHVEQVELQLTREVKDLPKMKLNPEIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF+L Y+PH I VSV Sbjct: 241 NFTFEDFSLEGYDPHPHIKGIVSV 264 >gi|282879252|ref|ZP_06288002.1| thymidylate synthase [Prevotella buccalis ATCC 35310] gi|281298645|gb|EFA91064.1| thymidylate synthase [Prevotella buccalis ATCC 35310] Length = 264 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL +++ G + DRTG GT+S FG+QMRF+L GFP+LTTKK+H KS+++ELL Sbjct: 1 MQQYLDLLHRILEEGKVKTDRTGTGTKSIFGHQMRFNLEDGFPVLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGVSIW+EWAD++G+LGP+YG QWRSWPD+ G IDQI +++ ++ Sbjct: 61 WFLKGDTNVKYLQEHGVSIWNEWADENGDLGPVYGHQWRSWPDHRGGTIDQIQNVIDLIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +V+AWN A I +MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HHPDSRRMLVTAWNPADISEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHT GD HLY NH EQA LQL+R+PR LPQM +NP++ L Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTTGDTHLYLNHIEQAKLQLTRTPRELPQMKLNPDVKSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L +Y P I A+V+V Sbjct: 241 DFRYEDFELLNYNPWPHIKAEVAV 264 >gi|154491774|ref|ZP_02031400.1| hypothetical protein PARMER_01390 [Parabacteroides merdae ATCC 43184] gi|154088015|gb|EDN87060.1| hypothetical protein PARMER_01390 [Parabacteroides merdae ATCC 43184] Length = 264 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V++ G + DRTG GT S FG+QMRF+L GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLELLDRVLREGVKKEDRTGTGTYSVFGHQMRFNLEDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N YL HGV IW+EWAD DG LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLQGDTNAKYLQEHGVRIWNEWADPDGNLGHIYGFQWRSWPDYKGGNIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D M LPPCH FQFYV NG+LS Q+YQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQMYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHLEQVKLQLTRDPRPLPRMEINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+PH I +V+V Sbjct: 241 GFQYEDFNLTGYDPHPHIKGEVAV 264 >gi|317130117|ref|YP_004096399.1| thymidylate synthase [Bacillus cellulosilyticus DSM 2522] gi|315475065|gb|ADU31668.1| thymidylate synthase [Bacillus cellulosilyticus DSM 2522] Length = 264 Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 157/264 (59%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL +H+++ G+++ DRTG GT STFGYQMRF+L+ GFP+LTTKK+ ++++HELL Sbjct: 1 MRQYHDLCKHILENGTEKTDRTGTGTISTFGYQMRFNLNDGFPVLTTKKLALRAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL + V IW+EWAD++G+LGP+YG QWRSWP G IDQ+ ++++ ++ Sbjct: 61 WFIKGDTNIRYLQENNVRIWNEWADENGDLGPVYGKQWRSWPTPSGETIDQLGNVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWNVA +DKMAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPDSRRLVVNAWNVADLDKMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G YG+F+HT GDVH+Y NH EQ +LQL+R PR LP M +NP + + Sbjct: 181 YALLTMMIARECGLDYGDFVHTFGDVHIYKNHIEQVNLQLTRDPRPLPTMKLNPEVKRIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+ EDF L Y+PH I +VSV Sbjct: 241 DFKIEDFELVGYDPHPHIKGEVSV 264 >gi|311068693|ref|YP_003973616.1| thymidylate synthase [Bacillus atrophaeus 1942] gi|310869210|gb|ADP32685.1| thymidylate synthase [Bacillus atrophaeus 1942] Length = 264 Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 165/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLENGEIKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQI+ +V ++ Sbjct: 61 WFLKGETNVKYLQDNGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQITRLVHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVGEIDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ ++QL+R R LP++ + + Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHTEQVNMQLTRDVRPLPKLRFAREVDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF + Y+PH I VSV Sbjct: 241 DFTFDDFIVEDYDPHPHIKGAVSV 264 >gi|317475464|ref|ZP_07934728.1| thymidylate synthase [Bacteroides eggerthii 1_2_48FAA] gi|316908492|gb|EFV30182.1| thymidylate synthase [Bacteroides eggerthii 1_2_48FAA] Length = 264 Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS +++++ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQLSR P+ LPQM INP++ ++ Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPKALPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I KV+V Sbjct: 241 DFKFEDFELINYDPHPHIAGKVAV 264 >gi|149924822|ref|ZP_01913162.1| thymidylate synthase [Plesiocystis pacifica SIR-1] gi|149814302|gb|EDM73904.1| thymidylate synthase [Plesiocystis pacifica SIR-1] Length = 273 Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 173/273 (63%), Positives = 209/273 (76%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL V++ G+ + DRTG GT+S FG Q+RFDL++GFPL+TTKKVH +S++HELL Sbjct: 1 MRAYLELLDRVLREGTTKTDRTGTGTKSLFGPQLRFDLAQGFPLVTTKKVHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY--DGNV-------IDQ 111 WFLRG++N++YLH + VSIWDEWAD DGELGPIYG QWRSWP++ DG+ IDQ Sbjct: 61 WFLRGETNLAYLHENKVSIWDEWADNDGELGPIYGEQWRSWPNHRADGSADSSQPQTIDQ 120 Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 +S +V LR +P SRR ++SAWNVA + MAL PCHCLFQFYV GKLSCQLYQRS D+F Sbjct: 121 MSWLVDELRRNPDSRRLVISAWNVADLPHMALAPCHCLFQFYVAEGKLSCQLYQRSADLF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V+G +YGEF+HT GD HLY NH EQA LQLSR PR LP M Sbjct: 181 LGVPFNIASYALLTMMIAKVVGLEYGEFVHTFGDAHLYLNHLEQAQLQLSREPRPLPTMH 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I+ L F YEDF L YEPH I A V+V Sbjct: 241 IDRVPDSLFEFCYEDFRLEGYEPHPRIKAPVAV 273 >gi|218264414|ref|ZP_03478271.1| hypothetical protein PRABACTJOHN_03967 [Parabacteroides johnsonii DSM 18315] gi|218222017|gb|EEC94667.1| hypothetical protein PRABACTJOHN_03967 [Parabacteroides johnsonii DSM 18315] Length = 264 Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V++ G + DRTG GT S FG+QMRF+L GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLELLDRVLREGVKKEDRTGTGTYSVFGHQMRFNLEDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N YL +HGV IW+EWAD DG LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLQGDTNAKYLQKHGVRIWNEWADPDGNLGHIYGFQWRSWPDYKGGSIDQISEAVKTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS Q+YQRS D+FLG+PFNIAS Sbjct: 121 QNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQMYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQL+R PR LP+M INP + D+ Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHLEQVKLQLTRDPRPLPRMEINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+PH I +V+V Sbjct: 241 GFQYEDFNLTGYDPHPHIKGEVAV 264 >gi|319903078|ref|YP_004162806.1| thymidylate synthase [Bacteroides helcogenes P 36-108] gi|319418109|gb|ADV45220.1| thymidylate synthase [Bacteroides helcogenes P 36-108] Length = 264 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRVLTEGAEKNDRTGTGTVSIFGHQMRFNMEEGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLKGDTNIKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ++ M LPPCH FQFYV NGKLS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLNNMNLPPCHAFFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL +M+A V G Q G+FIHTLGD H+Y NH EQ LQL+R+P+ LP M INP++ ++ Sbjct: 181 YALLLLMMAQVTGLQAGDFIHTLGDAHIYLNHIEQVKLQLTRNPKPLPLMNINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y PH I KV++ Sbjct: 241 DFKYEDFELVNYNPHPHIAGKVAI 264 >gi|213962407|ref|ZP_03390670.1| thymidylate synthase [Capnocytophaga sputigena Capno] gi|213955073|gb|EEB66392.1| thymidylate synthase [Capnocytophaga sputigena Capno] Length = 274 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 171/277 (61%), Positives = 210/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLRH+++ G + DRTG GT S FGYQMRFDLSKGFPL+TTKK+H KSV++ELL Sbjct: 1 MKVYHDLLRHILENGYSKDDRTGTGTTSVFGYQMRFDLSKGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGV IW+EWAD++G+LGP+YG QWR+W +G IDQI ++++L+ Sbjct: 61 WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRNW---NGEAIDQIKMVIETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 118 HNPESRRIIVSAWNPSVLPDTGKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLTMMLA V Q G+F+HT GDVH+YNNH EQ LQLSR PR L Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQVGDFVHTFGDVHIYNNHREQVALQLSRIPREL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +F YEDF L Y+P+ AI A+VSV Sbjct: 238 PTMHLNPAVKDLFAFDYEDFRLEGYDPYPAIKAQVSV 274 >gi|167764750|ref|ZP_02436871.1| hypothetical protein BACSTE_03140 [Bacteroides stercoris ATCC 43183] gi|167697419|gb|EDS13998.1| hypothetical protein BACSTE_03140 [Bacteroides stercoris ATCC 43183] Length = 264 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQLSR PR L QM INP++ ++ Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPRALSQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y PH I KV+V Sbjct: 241 DFKYEDFELVNYNPHPHIAGKVAV 264 >gi|283779094|ref|YP_003369849.1| thymidylate synthase [Pirellula staleyi DSM 6068] gi|283437547|gb|ADB15989.1| thymidylate synthase [Pirellula staleyi DSM 6068] Length = 264 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y L++ ++ G+ + DRTG GT S FG+QMRFDLS+GFP +TTKK+H +S++HELL Sbjct: 1 MEAYHQLMQRILDHGARKTDRTGTGTLSVFGHQMRFDLSQGFPAVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RG++N +YL + VSIWDEWAD +G LGP+YG QWRSWP DG IDQ++ ++ ++ Sbjct: 61 WFIRGETNTAYLKENKVSIWDEWADSEGNLGPVYGRQWRSWPTPDGRQIDQLAEVIARIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +++MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RDPDSRRLIVSAWNVGELEQMALPPCHLLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G G+F+HTLGD HLY+NH EQA LQLSR PR LP M INP + ++ Sbjct: 181 YALLTMMVAQVTGLALGDFVHTLGDAHLYSNHLEQAQLQLSREPRPLPTMQINPAVTEID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++DF L Y+PH I A V+V Sbjct: 241 AFTFDDFKLVGYDPHPHIAAPVAV 264 >gi|227538336|ref|ZP_03968385.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33300] gi|227241851|gb|EEI91866.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33300] Length = 273 Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 165/273 (60%), Positives = 206/273 (75%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV G + DRTG GT+S FGYQMRF+L +GFPL+TTKK+H +S++HEL+ Sbjct: 1 MKQYLDLLKHVYTNGVTKTDRTGTGTKSVFGYQMRFNLKEGFPLVTTKKLHLRSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD+ G LGP+YG QWRSWP G IDQI+ +++ L+ Sbjct: 61 WFLKGETNIQYLKENGVSIWDEWADEQGNLGPVYGSQWRSWPTPAGEHIDQIAQVIKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG---------KLSCQLYQRSGDVF 171 P SRR IVSAWNVA I+ MALPPCH FQFYV +LSCQLYQRS D+F Sbjct: 121 NTPDSRRIIVSAWNVAEIEHMALPPCHAFFQFYVAPAQPEAGIMKPQLSCQLYQRSADIF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V + EFIHTLGD H+Y+NHFEQ +LQLSR P+ LP+MI Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEAAEFIHTLGDAHIYSNHFEQTELQLSRDPKPLPKMI 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP++ D+ F++ DF L YE H I A V+V Sbjct: 241 INPDVRDIFDFKFGDFELVDYESHPHIKAPVAV 273 >gi|333029205|ref|ZP_08457266.1| Thymidylate synthase [Bacteroides coprosuis DSM 18011] gi|332739802|gb|EGJ70284.1| Thymidylate synthase [Bacteroides coprosuis DSM 18011] Length = 264 Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ V G+ + DRTG GT S FG+QMRF+++ GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLQRVKSEGAKKEDRTGTGTISVFGHQMRFNMADGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL HGV IW+EWAD +G LGPIYG QWRSWP Y+G DQI ++ ++ Sbjct: 61 WFLNGDTNVTYLQDHGVRIWNEWADSNGNLGPIYGYQWRSWPGYNGETFDQIKEAIRMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWNV I +M LPPCH LFQFYV NGKLS QLYQRS D+FLG+PFNIAS Sbjct: 121 ETPDSRRILVSAWNVGCISEMKLPPCHILFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHTLGD H+YNNH EQ DLQL+R PR LP+M INP + ++ Sbjct: 181 YALLLQMVAQVTGLEAGEFIHTLGDAHIYNNHLEQVDLQLTREPRKLPKMHINPRVKEID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y P+ I KVSV Sbjct: 241 QFKFEDFELTDYNPYPHIPGKVSV 264 >gi|257092198|ref|YP_003165839.1| Thymidylate synthase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044722|gb|ACV33910.1| Thymidylate synthase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 273 Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 164/273 (60%), Positives = 209/273 (76%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HV++ G + DRTG GTRS FG+QMRFDL+ GFPLLTTKK+H +S++HELL Sbjct: 1 MQQYLDLMHHVLEHGVSKADRTGTGTRSVFGWQMRFDLAAGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL +GV IWDEWAD++G+LGP+YG QWR W DG IDQI+ +V +L+ Sbjct: 61 WFLRGDTNVRYLQENGVRIWDEWADENGDLGPVYGRQWRHWQAADGREIDQIAQLVDNLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG---------KLSCQLYQRSGDVF 171 +P SRRH+++AWN +++MALPPCH L QFYV +LSCQLYQRS D+F Sbjct: 121 KNPDSRRHLLTAWNPGDVERMALPPCHALCQFYVAPASASATDRRPQLSCQLYQRSADIF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V ++ G+F+HT GD HLY NHF+QA LQL+R+ R LP M Sbjct: 181 LGVPFNIASYALLTMMVAQVCNYRPGDFVHTFGDAHLYGNHFDQARLQLTRATRALPTMR 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +NP + DL +FR+EDFTL Y+PH I A V+V Sbjct: 241 LNPEVDDLFAFRFEDFTLEGYDPHPHIAAAVAV 273 >gi|325286854|ref|YP_004262644.1| Thymidylate synthase [Cellulophaga lytica DSM 7489] gi|324322308|gb|ADY29773.1| Thymidylate synthase [Cellulophaga lytica DSM 7489] Length = 274 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 161/277 (58%), Positives = 212/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+HV + G+ + DRTG GT S FGYQMRFDLSKGFP++TTKK+H KS++HELL Sbjct: 1 MKQYHDLLKHVQETGNQKGDRTGTGTISVFGYQMRFDLSKGFPMVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV IW+EWAD++G+LGP+YG QWR+W D IDQI ++++L+ Sbjct: 61 WFLKGDTNIAYLQENGVRIWNEWADENGDLGPVYGHQWRNWNSED---IDQIKEVIETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +V+AWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMLVTAWNPSVLPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ G+FIHT GD H+YNNH EQ +LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGDFIHTFGDAHIYNNHLEQVELQLSREPRAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+MIINP++ ++ F ++DFTL Y+PH I KV++ Sbjct: 238 PKMIINPDVKNIFDFTFDDFTLEGYDPHPHIKGKVAI 274 >gi|56477943|ref|YP_159532.1| thymidylate synthase [Aromatoleum aromaticum EbN1] gi|62901201|sp|Q5P233|TYSY_AZOSE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|56313986|emb|CAI08631.1| Thymidylate synthase [Aromatoleum aromaticum EbN1] Length = 264 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV+ G + DRTG GT S FG+QMRF+L GFPLLTTKK+H +S++HELL Sbjct: 1 MKQYLDLMRHVLDHGDRKSDRTGTGTLSIFGWQMRFNLDDGFPLLTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL+ +GVSIWD+WAD++G+LGP+YG QWR W +G IDQI+ ++ L+ Sbjct: 61 WFLRGDTNIRYLNENGVSIWDDWADENGDLGPVYGKQWRRWETANGATIDQIAQLIDGLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRH+VSAWN + MALPPCH LFQFYV +LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRHLVSAWNPGEVAGMALPPCHALFQFYVAGDRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+ T GD HLY NH +QA LQLSR PR LP+MI+NP + D+ Sbjct: 181 YALLTLMVAQVCGLRAGDFVWTGGDCHLYLNHLDQARLQLSRQPRALPRMIVNPGVTDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L Y+PH I A+V+V Sbjct: 241 GFRFEDFRLEGYDPHPHIKAEVAV 264 >gi|301166943|emb|CBW26522.1| putative thymidylate synthase [Bacteriovorax marinus SJ] Length = 257 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 160/257 (62%), Positives = 203/257 (78%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 ++HV+ G ++ DRTG GT S FGYQ R+DLS+GFPL+TTKK H +S++HELLWFL+GD+ Sbjct: 1 MKHVLDNGVEKSDRTGTGTISCFGYQARYDLSEGFPLVTTKKCHLRSIIHELLWFLKGDT 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N++YL + V+IWDEWAD+DG LGP+YG QWR W DG+ +DQIS++V+ ++ +P SRR Sbjct: 61 NINYLKENKVTIWDEWADEDGNLGPVYGAQWRKWQRPDGSHVDQISNLVEQIKNNPDSRR 120 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 IVSAWN +ID+MALPPCH FQF+V N KLSCQLYQRS D+FLG+PFNIASY+LLTMM Sbjct: 121 LIVSAWNPGVIDQMALPPCHAFFQFFVANDKLSCQLYQRSADIFLGVPFNIASYALLTMM 180 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A V G + GEFIHTLGD HLY+NH +QA LQLSR PR LPQM INP + ++ F + DF Sbjct: 181 MAQVTGLEAGEFIHTLGDAHLYSNHLDQAKLQLSRDPRPLPQMKINPEVKNIFEFNFSDF 240 Query: 248 TLRSYEPHAAILAKVSV 264 L Y+PH I A V+V Sbjct: 241 ELVGYDPHPHIKAPVAV 257 >gi|113971196|ref|YP_734989.1| thymidylate synthase [Shewanella sp. MR-4] gi|114048434|ref|YP_738984.1| thymidylate synthase [Shewanella sp. MR-7] gi|122944477|sp|Q0HSH8|TYSY_SHESR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123029436|sp|Q0HG85|TYSY_SHESM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|113885880|gb|ABI39932.1| thymidylate synthase [Shewanella sp. MR-4] gi|113889876|gb|ABI43927.1| thymidylate synthase [Shewanella sp. MR-7] Length = 264 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL Sbjct: 1 MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + VSIWDEWAD++G+LGP+YG QWRSWP G+ IDQI+ ++ ++ Sbjct: 61 WFLKGDTNIAYLRDNKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQIAQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR PR LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPTMTILRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF L +Y+PH I A V+V Sbjct: 241 DYQFEDFELTNYDPHPHIKAPVAV 264 >gi|300774218|ref|ZP_07084085.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33861] gi|300758897|gb|EFK55726.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33861] Length = 273 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 165/273 (60%), Positives = 206/273 (75%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV G + DRTG GT+S FGYQMRF+L +GFPL+TTKK+H +S++HEL+ Sbjct: 1 MKQYLDLLKHVYTNGVTKTDRTGTGTKSVFGYQMRFNLKEGFPLVTTKKLHLRSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD+ G LGP+YG QWRSWP G IDQI+ +++ L+ Sbjct: 61 WFLKGETNIQYLKENGVSIWDEWADEQGNLGPVYGSQWRSWPTPAGEHIDQIAQVIKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG---------KLSCQLYQRSGDVF 171 P SRR IVSAWNVA I+ MALPPCH FQFYV +LSCQLYQRS D+F Sbjct: 121 NTPDSRRIIVSAWNVAEIEHMALPPCHAFFQFYVAPAQPEAGILKPQLSCQLYQRSADIF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V + EFIHTLGD H+Y+NHFEQ +LQLSR P+ LP+MI Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEPAEFIHTLGDAHIYSNHFEQTELQLSRDPKPLPKMI 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP++ D+ F++ DF L YE H I A V+V Sbjct: 241 INPDVRDIFDFKFGDFELVDYESHPHIKAPVAV 273 >gi|117921478|ref|YP_870670.1| thymidylate synthase [Shewanella sp. ANA-3] gi|166231734|sp|A0KZP5|TYSY_SHESA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|117613810|gb|ABK49264.1| thymidylate synthase [Shewanella sp. ANA-3] Length = 264 Score = 362 bits (928), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL Sbjct: 1 MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + VSIWDEWAD++G+LGP+YG QWRSWP G+ IDQI+ ++ ++ Sbjct: 61 WFLKGDTNIAYLRENKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQIAQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR PR LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRQLPTMTILRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF L Y+PH I A V+V Sbjct: 241 DYQFEDFELTHYDPHPHIKAPVAV 264 >gi|113868661|ref|YP_727150.1| thymidylate synthase [Ralstonia eutropha H16] gi|113527437|emb|CAJ93782.1| thymidylate synthase [Ralstonia eutropha H16] Length = 282 Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL GFP++TTKK+H KS+++ELL Sbjct: 19 MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLRAGFPVVTTKKLHLKSIIYELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L HGV+IWDEWAD++GELGP+YG QWRSWP DG IDQI+ +V +R Sbjct: 79 WFLQGSTNVRWLQEHGVTIWDEWADENGELGPVYGSQWRSWPTPDGRHIDQITDLVAQIR 138 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWNVA I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 139 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 198 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + G+F+ T GD HLYNNHFEQ QL+R P LPQ+ I + Sbjct: 199 YALLTHMMAQQTGLEVGDFVWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRKPDSIF 258 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF L Y+ HAAI A V+V Sbjct: 259 DYRYEDFELAGYQSHAAIKAPVAV 282 >gi|237713988|ref|ZP_04544469.1| thymidylate synthase [Bacteroides sp. D1] gi|262407040|ref|ZP_06083589.1| thymidylate synthase [Bacteroides sp. 2_1_22] gi|294809774|ref|ZP_06768458.1| thymidylate synthase [Bacteroides xylanisolvens SD CC 1b] gi|298479700|ref|ZP_06997900.1| thymidylate synthase [Bacteroides sp. D22] gi|229445812|gb|EEO51603.1| thymidylate synthase [Bacteroides sp. D1] gi|262355743|gb|EEZ04834.1| thymidylate synthase [Bacteroides sp. 2_1_22] gi|294443014|gb|EFG11797.1| thymidylate synthase [Bacteroides xylanisolvens SD CC 1b] gi|295084876|emb|CBK66399.1| thymidylate synthase [Bacteroides xylanisolvens XB1A] gi|298274090|gb|EFI15651.1| thymidylate synthase [Bacteroides sp. D22] Length = 264 Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISIFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG +YG QWRSWPDY+G IDQIS +V++L+ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV +G+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HT GD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264 >gi|172044615|sp|Q0K889|TYSY_RALEH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 264 Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLRAGFPVVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L HGV+IWDEWAD++GELGP+YG QWRSWP DG IDQI+ +V +R Sbjct: 61 WFLQGSTNVRWLQEHGVTIWDEWADENGELGPVYGSQWRSWPTPDGRHIDQITDLVAQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWNVA I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + G+F+ T GD HLYNNHFEQ QL+R P LPQ+ I + Sbjct: 181 YALLTHMMAQQTGLEVGDFVWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF L Y+ HAAI A V+V Sbjct: 241 DYRYEDFELAGYQSHAAIKAPVAV 264 >gi|82411148|gb|ABB75257.1| thymidylate synthase [Nitrosospira multiformis ATCC 25196] Length = 285 Score = 361 bits (927), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H KS+++ELL Sbjct: 22 MRQYLDLMQHVLEHGQKKSDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKLHLKSIIYELL 81 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ + VSIWDEWAD++G+LGPIYG QWRSWP+ G IDQI +V+ +R Sbjct: 82 WFLKGDTNIRYLNENDVSIWDEWADENGDLGPIYGRQWRSWPNGKGGHIDQIEQVVEQIR 141 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VS+WNV + +M L PCH LFQFYV KLSCQLYQRS D+FLG+PFNIAS Sbjct: 142 NTPDSRRMLVSSWNVGELQEMKLAPCHALFQFYVAEDKLSCQLYQRSADIFLGVPFNIAS 201 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+MLA + GEF+HT GD HLY NH EQA QL R P+ LP M +NP I ++ Sbjct: 202 YALLTLMLAQSCDLRAGEFVHTFGDAHLYLNHLEQAREQLERGPKKLPIMKLNPAIRNVF 261 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH +I A ++V Sbjct: 262 DFRYEDFNLEGYDPHPSIKAPIAV 285 >gi|256425405|ref|YP_003126058.1| thymidylate synthase [Chitinophaga pinensis DSM 2588] gi|256040313|gb|ACU63857.1| thymidylate synthase [Chitinophaga pinensis DSM 2588] Length = 264 Score = 361 bits (927), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL+H+I GS + DRTG GT S FG Q+RF+L +GFP++TTKKVH KS+++ELL Sbjct: 1 MEQYLKLLQHIIDQGSVKTDRTGTGTTSCFGAQLRFNLQEGFPMVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL HGVSIWDEWAD++G+LGP+YG QWRSW DG VIDQI+ V++++ Sbjct: 61 WFLNGDTNIKYLKDHGVSIWDEWADENGDLGPVYGKQWRSWETKDGKVIDQITEAVKTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNV + MAL PCHCLFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPDSRRIIVNAWNVGDLPDMALSPCHCLFQFYVAEGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y++LTMM+A V + G+F+HT GDVHLY+NH EQA LQLSR P LP + INP + D+ Sbjct: 181 YAILTMMMAQVCDLEPGDFVHTFGDVHLYSNHMEQAKLQLSRQPFELPVLKINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+ H I A V++ Sbjct: 241 GFKFEDFELLNYQHHPHIKAPVAI 264 >gi|323143173|ref|ZP_08077870.1| thymidylate synthase [Succinatimonas hippei YIT 12066] gi|322417060|gb|EFY07697.1| thymidylate synthase [Succinatimonas hippei YIT 12066] Length = 264 Score = 361 bits (927), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 170/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+R +++ G DR DRTG GTRS FG QMRFDL+KGFPLLTTKKVH +S++HELL Sbjct: 1 MKIYLDLMRRILEEGVDRSDRTGTGTRSIFGTQMRFDLNKGFPLLTTKKVHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSW DG VIDQIS+ V ++ Sbjct: 61 WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGKQWRSWAAPDGKVIDQISNAVDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++KMALPPCH LFQFYV NGKLSC LYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNPADVEKMALPPCHALFQFYVANGKLSCLLYQRSCDFFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLTMM+A G+F+ T GD HLY+NHFEQA LQLSR+PR LP M+I + Sbjct: 181 YSLLTMMMAKECDLGLGDFVWTGGDTHLYSNHFEQAHLQLSRTPRALPTMLIKRKAPSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF L +Y+P+ I A V+V Sbjct: 241 DYKYEDFELINYDPYPVIKAPVAV 264 >gi|119774004|ref|YP_926744.1| thymidylate synthase [Shewanella amazonensis SB2B] gi|166231729|sp|A1S3W8|TYSY_SHEAM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119766504|gb|ABL99074.1| thymidylate synthase [Shewanella amazonensis SB2B] Length = 264 Score = 361 bits (927), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 165/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G+D+ DRTG GTRS FGYQMRFDL++GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKHILDKGTDKSDRTGTGTRSVFGYQMRFDLNEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV YLH + VSIWDEWAD+ G LGP+YG QWRSWP DG IDQIS +++ ++ Sbjct: 61 WFLKGETNVDYLHENKVSIWDEWADEKGNLGPVYGAQWRSWPTPDGRHIDQISQVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 ATPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR PR LP M I + + Sbjct: 181 YALLTMMVAQQCNLGLGDFVWTGGDTHLYSNHMEQTQLQLSREPRPLPTMKILRHPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF L Y+PH I A V++ Sbjct: 241 DYRFEDFELSGYDPHPHIKAPVAI 264 >gi|162139863|ref|YP_412649.2| thymidylate synthase [Nitrosospira multiformis ATCC 25196] Length = 264 Score = 361 bits (927), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H KS+++ELL Sbjct: 1 MRQYLDLMQHVLEHGQKKSDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ + VSIWDEWAD++G+LGPIYG QWRSWP+ G IDQI +V+ +R Sbjct: 61 WFLKGDTNIRYLNENDVSIWDEWADENGDLGPIYGRQWRSWPNGKGGHIDQIEQVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VS+WNV + +M L PCH LFQFYV KLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NTPDSRRMLVSSWNVGELQEMKLAPCHALFQFYVAEDKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+MLA + GEF+HT GD HLY NH EQA QL R P+ LP M +NP I ++ Sbjct: 181 YALLTLMLAQSCDLRAGEFVHTFGDAHLYLNHLEQAREQLERGPKKLPIMKLNPAIRNVF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH +I A ++V Sbjct: 241 DFRYEDFNLEGYDPHPSIKAPIAV 264 >gi|60682981|ref|YP_213125.1| thymidylate synthase [Bacteroides fragilis NCTC 9343] gi|81313963|sp|Q5L9L6|TYSY_BACFN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|60494415|emb|CAH09211.1| putative thymidylate synthase B [Bacteroides fragilis NCTC 9343] gi|301164446|emb|CBW24004.1| putative thymidylate synthase B [Bacteroides fragilis 638R] Length = 264 Score = 361 bits (926), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD+ G+LG IYG QWRSWP YDG IDQIS V +++ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYDGGFIDQISEAVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I KV+V Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264 >gi|150024438|ref|YP_001295264.1| thymidylate synthase [Flavobacterium psychrophilum JIP02/86] gi|166231699|sp|A6GWH3|TYSY_FLAPJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|149770979|emb|CAL42446.1| Thymidylate synthase [Flavobacterium psychrophilum JIP02/86] Length = 274 Score = 361 bits (926), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 158/277 (57%), Positives = 213/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+++V+ G+ + DRTG GT+S FGYQMRF+L++GFP++TTKK+H KS++HELL Sbjct: 1 MKQYLDLVKYVLNNGTQKGDRTGTGTKSVFGYQMRFNLAEGFPMVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL ++GV IWD+WAD++GELGP+YG QWR+W + + IDQI+ ++++L+ Sbjct: 61 WFLKGETNIAYLQQNGVKIWDDWADENGELGPVYGHQWRNWNNEE---IDQITELIETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K+ALPPCH FQFYV GKLSCQLYQRS Sbjct: 118 INPNSRRMLVSAWNPSVLPDTTKSFAENVANAKVALPPCHAFFQFYVSEGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V Q GEFIHT GD H+YNNHFEQ LQLSR P+ L Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCDLQAGEFIHTFGDAHIYNNHFEQVALQLSREPKPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+MI+NP + ++ F++EDF L YE HA I V+V Sbjct: 238 PKMILNPAVKNIFDFKFEDFKLEGYESHAHIKGAVAV 274 >gi|24372913|ref|NP_716955.1| thymidylate synthase [Shewanella oneidensis MR-1] gi|32171834|sp|Q8EH94|TYSY_SHEON RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|24347042|gb|AAN54400.1|AE015577_10 thymidylate synthase [Shewanella oneidensis MR-1] Length = 264 Score = 361 bits (926), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL Sbjct: 1 MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + VSIWDEWAD++G+LGP+YG QWRSWP G IDQIS ++ ++ Sbjct: 61 WFLKGDTNIAYLRDNKVSIWDEWADENGDLGPVYGAQWRSWPTQSGEAIDQISQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR PR LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPTMTILRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L +Y+PH I A V+V Sbjct: 241 DYQFDDFALSNYDPHPHIKAPVAV 264 >gi|218128749|ref|ZP_03457553.1| hypothetical protein BACEGG_00321 [Bacteroides eggerthii DSM 20697] gi|217988977|gb|EEC55293.1| hypothetical protein BACEGG_00321 [Bacteroides eggerthii DSM 20697] Length = 264 Score = 361 bits (926), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS +++++ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH Q LQLSR P+ LPQM INP++ ++ Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLAQVKLQLSREPKALPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I KV+V Sbjct: 241 DFKFEDFELINYDPHPHIAGKVAV 264 >gi|188582027|ref|YP_001925472.1| thymidylate synthase [Methylobacterium populi BJ001] gi|179345525|gb|ACB80937.1| Thymidylate synthase [Methylobacterium populi BJ001] Length = 264 Score = 361 bits (926), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDLS+GFPL+TTK++H +S+VHELL Sbjct: 1 MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLSEGFPLVTTKQLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GV+IWDEWAD +G+LGP+YG QWRSW DG +DQI+ I+ + Sbjct: 61 WFLKGDTNVAYLRENGVTIWDEWADANGDLGPVYGRQWRSWAKPDGGTVDQIAWILDEIA 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVAEGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY NH +QA LQLSR+PR LP++ +NP + L Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLDQARLQLSRAPRALPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + YEPH AI A V+V Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264 >gi|254292830|ref|YP_003058853.1| thymidylate synthase [Hirschia baltica ATCC 49814] gi|254041361|gb|ACT58156.1| thymidylate synthase [Hirschia baltica ATCC 49814] Length = 264 Score = 360 bits (925), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ V+ G +R DRTG GT+ FG QMRFDLS+ FP+LTTKK+H +S++ ELL Sbjct: 1 MRQYLDLLQDVLDNGVERGDRTGTGTKGVFGRQMRFDLSETFPILTTKKLHLRSIIIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSW DG VIDQIS ++ ++ Sbjct: 61 WFLKGDTNIKYLTDNKVSIWDEWADENGDLGPVYGKQWRSWAAPDGRVIDQISWVLNEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNPADVNDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G + GEF+H+ GD HLY NH EQA LQL+R + LP M +NP+ DL Sbjct: 181 YALLTMMMARATGLEAGEFVHSFGDAHLYMNHIEQAKLQLTRDTKQLPIMTLNPDKTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDFTL YE H I A ++V Sbjct: 241 GWDYEDFTLHGYEAHPTIKAPIAV 264 >gi|265766866|ref|ZP_06094695.1| thymidylate synthase [Bacteroides sp. 2_1_16] gi|263253243|gb|EEZ24719.1| thymidylate synthase [Bacteroides sp. 2_1_16] Length = 264 Score = 360 bits (925), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD+ G+LG +YG QWRSWP YDG IDQIS V +++ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHVYGYQWRSWPTYDGGFIDQISEAVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I KV+V Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264 >gi|261855508|ref|YP_003262791.1| thymidylate synthase [Halothiobacillus neapolitanus c2] gi|261835977|gb|ACX95744.1| thymidylate synthase [Halothiobacillus neapolitanus c2] Length = 264 Score = 360 bits (925), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ V++ G DR DRTG GTRS FGYQMRFDL GFP LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLQKVMEQGVDRGDRTGTGTRSLFGYQMRFDLEAGFPALTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL +GV IWDEWAD +G LGP+YG QWRSW DG IDQ+S ++ ++ Sbjct: 61 WFIQGDTNIRYLQENGVRIWDEWADAEGNLGPVYGKQWRSWATPDGRTIDQLSQVIHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IV+AWN A + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TTPESRRLIVTAWNPADVPNMALPPCHLLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEF+HTLGD H+Y+NHFEQA QL R+P LP M INP + Sbjct: 181 YALLTLMIAQVTGLKPGEFVHTLGDAHIYHNHFEQARTQLERTPGKLPTMKINPERRSIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF ++DF L Y P I A V+V Sbjct: 241 SFVFDDFVLEDYAPLPHIAAPVAV 264 >gi|21241612|ref|NP_641194.1| thymidylate synthase [Xanthomonas axonopodis pv. citri str. 306] gi|25091469|sp|Q8PP46|TYSY_XANAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|21106971|gb|AAM35730.1| thymidylate synthase [Xanthomonas axonopodis pv. citri str. 306] Length = 264 Score = 360 bits (925), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+HV+ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLELLQHVLDHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL H V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLSDHQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPSLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|237720128|ref|ZP_04550609.1| thymidylate synthase [Bacteroides sp. 2_2_4] gi|260174020|ref|ZP_05760432.1| thymidylate synthase [Bacteroides sp. D2] gi|293373111|ref|ZP_06619476.1| thymidylate synthase [Bacteroides ovatus SD CMC 3f] gi|299148006|ref|ZP_07041069.1| thymidylate synthase [Bacteroides sp. 3_1_23] gi|315922289|ref|ZP_07918529.1| conserved hypothetical protein [Bacteroides sp. D2] gi|229450680|gb|EEO56471.1| thymidylate synthase [Bacteroides sp. 2_2_4] gi|292631930|gb|EFF50543.1| thymidylate synthase [Bacteroides ovatus SD CMC 3f] gi|298514189|gb|EFI38075.1| thymidylate synthase [Bacteroides sp. 3_1_23] gi|313696164|gb|EFS32999.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 264 Score = 360 bits (925), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG +YG QWRSWPDY+G IDQIS +V++++ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV +G+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HT GD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264 >gi|189462550|ref|ZP_03011335.1| hypothetical protein BACCOP_03240 [Bacteroides coprocola DSM 17136] gi|189430711|gb|EDU99695.1| hypothetical protein BACCOP_03240 [Bacteroides coprocola DSM 17136] Length = 274 Score = 360 bits (925), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ + G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 11 MKQYLDLLQRIRTEGVKKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY+G IDQIS V++++ Sbjct: 71 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYEGGFIDQISEAVETIK 130 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNVA + M LPPCH FQFYV NG+LS Q+YQRS D FLG+PFNIAS Sbjct: 131 HNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVANGRLSLQMYQRSADSFLGVPFNIAS 190 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHT+GD H+Y NH EQ DLQL+RSPR LPQM++NP++ ++ Sbjct: 191 YALLLQMMAQVTGLKAGDFIHTIGDAHIYLNHQEQVDLQLTRSPRPLPQMLLNPDVKNIF 250 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y+P I KVSV Sbjct: 251 DFKYEDFELVNYDPWPHIAGKVSV 274 >gi|29347457|ref|NP_810960.1| thymidylate synthase [Bacteroides thetaiotaomicron VPI-5482] gi|253570671|ref|ZP_04848079.1| thymidylate synthase [Bacteroides sp. 1_1_6] gi|298385085|ref|ZP_06994644.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|62901371|sp|Q8A639|TYSY_BACTN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|29339357|gb|AAO77154.1| thymidylate synthase [Bacteroides thetaiotaomicron VPI-5482] gi|251839620|gb|EES67703.1| thymidylate synthase [Bacteroides sp. 1_1_6] gi|298262229|gb|EFI05094.1| thymidylate synthase [Bacteroides sp. 1_1_14] Length = 264 Score = 360 bits (925), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N YL HGV IW+EWAD++G+LG IYG QWRSWPDYDG IDQIS V++++ Sbjct: 61 WFLQGDTNAKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYDGGFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA + M LPPCH FQFYV +G+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLKNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHTLGD H+Y NH +Q LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGEFIHTLGDAHIYLNHLDQVKLQLSREPRALPQMKINPDVKSIY 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFQFEDFELVNYDPHPHIAGIVAV 264 >gi|150010315|ref|YP_001305058.1| thymidylate synthase [Parabacteroides distasonis ATCC 8503] gi|256839166|ref|ZP_05544676.1| thymidylate synthase [Parabacteroides sp. D13] gi|262382399|ref|ZP_06075536.1| thymidylate synthase [Bacteroides sp. 2_1_33B] gi|298374712|ref|ZP_06984670.1| thymidylate synthase [Bacteroides sp. 3_1_19] gi|301308397|ref|ZP_07214351.1| thymidylate synthase [Bacteroides sp. 20_3] gi|166231722|sp|A6LIC2|TYSY_PARD8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|149938739|gb|ABR45436.1| thymidylate synthase [Parabacteroides distasonis ATCC 8503] gi|256740085|gb|EEU53409.1| thymidylate synthase [Parabacteroides sp. D13] gi|262295277|gb|EEY83208.1| thymidylate synthase [Bacteroides sp. 2_1_33B] gi|298269080|gb|EFI10735.1| thymidylate synthase [Bacteroides sp. 3_1_19] gi|300833867|gb|EFK64483.1| thymidylate synthase [Bacteroides sp. 20_3] Length = 264 Score = 360 bits (925), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLELLNRVLTEGVRKEDRTGTGTISVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL HGV IW+EWAD DG LG IYG QWRSWPDY G IDQI+ V++++ Sbjct: 61 WFLNGDTNVKYLQDHGVRIWNEWADADGSLGHIYGYQWRSWPDYKGGSIDQITEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G + G+F+HTLGD H+Y+NH EQ LQL+R PR LP+M INP++ + Sbjct: 181 YALLLQMMAQATGLKAGDFVHTLGDAHIYSNHLEQVKLQLTREPRALPRMEINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y+PH I +V+V Sbjct: 241 DFKFEDFNLTGYDPHPHIKGEVAV 264 >gi|189468577|ref|ZP_03017362.1| hypothetical protein BACINT_04980 [Bacteroides intestinalis DSM 17393] gi|189436841|gb|EDV05826.1| hypothetical protein BACINT_04980 [Bacteroides intestinalis DSM 17393] Length = 264 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G + DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGIHKEDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL HGV IW+EWAD++GELG IYG QWRSWPDY G IDQIS V+++ Sbjct: 61 WFLNGDTNAKYLQDHGVRIWNEWADENGELGHIYGYQWRSWPDYKGGSIDQISEAVETIL 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G + G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQITGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y+PH I KVSV Sbjct: 241 DFQYEDFELVNYDPHPHIAGKVSV 264 >gi|163793369|ref|ZP_02187344.1| thymidylate synthase [alpha proteobacterium BAL199] gi|159181171|gb|EDP65686.1| thymidylate synthase [alpha proteobacterium BAL199] Length = 264 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 168/264 (63%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HV+ G+ + DRTG GTRS FG+QMRFDLSKGFP++TTKK+H KS+VHELL Sbjct: 1 MRQYLDLMTHVLTDGALKGDRTGTGTRSVFGHQMRFDLSKGFPMVTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL GV IW+EWA DG+LGP+YG QWRSW DG+ +DQIS ++ LR Sbjct: 61 WFLAGDTNVRYLQERGVRIWNEWARPDGDLGPVYGKQWRSWGSPDGSTVDQISVLLDQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPNSRRLIVSAWNVGELDDMALAPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G GEF+HT GD HLY NH EQA QL R P LP++ +NPN+ DL Sbjct: 181 YALLTHMIAHVTGLGVGEFVHTFGDAHLYLNHLEQARRQLQREPLPLPRLWLNPNVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +ED + YE H I A V+V Sbjct: 241 EFTFEDVRIDGYEAHPHIAAPVAV 264 >gi|285019528|ref|YP_003377239.1| thymidylate synthase [Xanthomonas albilineans GPE PC73] gi|283474746|emb|CBA17245.1| probable thymidylate synthase protein [Xanthomonas albilineans] Length = 264 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LLRHV+ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S+VHELL Sbjct: 1 MTPYLELLRHVLTHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL + VSIWDEWAD GELGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLKGETNIAYLKDNKVSIWDEWADAQGELGPVYGKQWRRWAGADGREIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVAELPQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHF QA QL+R+PR LP++ +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFAQAREQLARTPRPLPRLRLNPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F Y+D + Y+PH AI A V+V Sbjct: 241 AFTYDDIAIEGYDPHPAIKAPVAV 264 >gi|294626073|ref|ZP_06704681.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599609|gb|EFF43738.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 264 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V +R Sbjct: 61 WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWSGPDGVEIDQMQWLVDEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRAPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|119899486|ref|YP_934699.1| thymidylate synthase [Azoarcus sp. BH72] gi|166231687|sp|A1KAF7|TYSY_AZOSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119671899|emb|CAL95813.1| thymidylate synthase [Azoarcus sp. BH72] Length = 264 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV++ G + DRTG GT S FG+QMRF L++GFPLLTTKK+H +S++HELL Sbjct: 1 MQQYLDLMRHVLEHGDRKTDRTGTGTVSVFGWQMRFRLAEGFPLLTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RGD+N+ YL HGVSIWDEWAD++G+LGP+YG QWR W DG +DQ++ ++ ++ Sbjct: 61 WFIRGDTNIRYLKDHGVSIWDEWADENGDLGPVYGKQWRRWETADGRSVDQLAQLIDGIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN + MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRHIVSAWNPGEVGSMALPPCHALFQFYVAGGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+F+ T GD HLY NH +QA+ QL R+P LP+MI+NP + DL Sbjct: 181 YALLTMMVAQVCDLEPGDFVWTGGDCHLYLNHLQQAEEQLQRTPYPLPRMILNPEVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDFTL Y H I A V+V Sbjct: 241 AFRFEDFTLEGYTAHPHIKAPVAV 264 >gi|194290285|ref|YP_002006192.1| thymidylate synthase [Cupriavidus taiwanensis LMG 19424] gi|193224120|emb|CAQ70129.1| thymidylate synthetase [Cupriavidus taiwanensis LMG 19424] Length = 283 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL +GFP++TTKK+H KS+++ELL Sbjct: 20 MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLREGFPVVTTKKLHLKSIIYELL 79 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L HGV+IWDEWAD+ GELGP+YG QWRSWP DG IDQI+ +V +R Sbjct: 80 WFLQGSTNVRWLQEHGVTIWDEWADEHGELGPVYGSQWRSWPAPDGRHIDQITELVAQIR 139 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWNVA I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 140 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 199 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + G+FI T GD HLYNNHFEQ QL+R P LPQ+ I + Sbjct: 200 YALLTHMMAQQTGLEVGDFIWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRRPDSIF 259 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF L Y+ H AI A V+V Sbjct: 260 DYRYEDFELAGYQSHPAIKAPVAV 283 >gi|217970012|ref|YP_002355246.1| thymidylate synthase [Thauera sp. MZ1T] gi|217507339|gb|ACK54350.1| thymidylate synthase [Thauera sp. MZ1T] Length = 264 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV++ G + DRTG GT S FG+QMRF L GFPLLTTKK+H +S++HELL Sbjct: 1 MRQYLDLMRHVLEHGDPKTDRTGTGTLSVFGWQMRFRLQDGFPLLTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD DGELGP+YG QWR W DG +DQI+ +V+S+R Sbjct: 61 WFLQGDTNIRYLRENGVSIWDEWADADGELGPVYGKQWRRWETADGRSVDQIARVVESIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRRH+VSAWN +D MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RTPDSRRHLVSAWNPGEVDAMALPPCHALFQFYVAGGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + G+F+ T GD HLY+NH QA QL R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQVCELEAGDFVWTGGDCHLYSNHLRQAREQLERAPRPLPTLRLNPAVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED L Y+PH I A V+V Sbjct: 241 GFRFEDIALEGYDPHPHIKAPVAV 264 >gi|198276921|ref|ZP_03209452.1| hypothetical protein BACPLE_03126 [Bacteroides plebeius DSM 17135] gi|198270446|gb|EDY94716.1| hypothetical protein BACPLE_03126 [Bacteroides plebeius DSM 17135] Length = 264 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 165/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL + G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLHRIRTEGVRKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWP YDG IDQIS V++++ Sbjct: 61 WFLQGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPGYDGKFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ++ M LPPCH FQFYV NG+LS Q+YQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLNNMNLPPCHAFFQFYVANGRLSLQMYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ DLQL+R+PR LP M INP++ D+ Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVDLQLTRTPRPLPTMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF YEDF L +Y+P I KVSV Sbjct: 241 SFHYEDFQLENYDPWPHIAGKVSV 264 >gi|160882708|ref|ZP_02063711.1| hypothetical protein BACOVA_00666 [Bacteroides ovatus ATCC 8483] gi|156111878|gb|EDO13623.1| hypothetical protein BACOVA_00666 [Bacteroides ovatus ATCC 8483] Length = 264 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+ + DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTKKDDRTGTGTISIFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG IYG QWRSWPDY+G IDQIS +V++++ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISEVVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV +G+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HT GD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMRINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264 >gi|325917331|ref|ZP_08179549.1| thymidylate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325536465|gb|EGD08243.1| thymidylate synthase [Xanthomonas vesicatoria ATCC 35937] Length = 264 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLRHV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLDLLRHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLQGDTNIGYLKDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELSQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY NHF+QA +QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYANHFDQARVQLTRAPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|160889228|ref|ZP_02070231.1| hypothetical protein BACUNI_01649 [Bacteroides uniformis ATCC 8492] gi|270295980|ref|ZP_06202180.1| thymidylate synthase [Bacteroides sp. D20] gi|156861235|gb|EDO54666.1| hypothetical protein BACUNI_01649 [Bacteroides uniformis ATCC 8492] gi|270273384|gb|EFA19246.1| thymidylate synthase [Bacteroides sp. D20] Length = 264 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGVEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWP+Y G IDQIS V++++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPNYKGGFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRDLPQMRINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y PH I KVSV Sbjct: 241 DFKFEDFELVNYNPHPHIAGKVSV 264 >gi|325981748|ref|YP_004294150.1| thymidylate synthase [Nitrosomonas sp. AL212] gi|325531267|gb|ADZ25988.1| thymidylate synthase [Nitrosomonas sp. AL212] Length = 264 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++HVI G + DRTG+GT S FG+QMRFDL+ GFPL+TTKK H KS++HELL Sbjct: 1 MRQYLELMQHVIDHGFQKTDRTGIGTLSIFGHQMRFDLNDGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RGD+NV YLH++GVSIWDEWAD +G LGPIYG QWRSW DG IDQ+ +++ + Sbjct: 61 WFIRGDTNVRYLHKYGVSIWDEWADVNGNLGPIYGQQWRSWMSADGQKIDQLQQVIKQII 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VS+WNV + +M LPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 DTPDSRRMLVSSWNVGELHRMRLPPCHALFQFYVADNKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V GEF+HTLGD HLY NH EQA QLSR PR LP M +NP I + Sbjct: 181 YALLTMMIAQVSNLGVGEFVHTLGDAHLYLNHLEQAREQLSRQPRPLPVMRLNPMIRTIS 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YEDF L +Y+PH I A V+V Sbjct: 241 EFEYEDFVLENYDPHPPIKAPVAV 264 >gi|253566116|ref|ZP_04843570.1| thymidylate synthase [Bacteroides sp. 3_2_5] gi|251945220|gb|EES85658.1| thymidylate synthase [Bacteroides sp. 3_2_5] Length = 264 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD+ G+LG IYG QWRSWP Y+G IDQIS V +++ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYNGGFIDQISEAVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I KV+V Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264 >gi|163852080|ref|YP_001640123.1| thymidylate synthase [Methylobacterium extorquens PA1] gi|163663685|gb|ABY31052.1| Thymidylate synthase [Methylobacterium extorquens PA1] Length = 264 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL Sbjct: 1 MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GV+IWDEWAD +G+LGP+YG QWRSW DG +DQI+ I+ + Sbjct: 61 WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGGTVDQIAWILDEIA 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV NG+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVANGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY NH EQ LQLSR PR LP++ +NP + L Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + YEPH AI A V+V Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264 >gi|90019999|ref|YP_525826.1| thymidylate synthase [Saccharophagus degradans 2-40] gi|122996594|sp|Q21NW5|TYSY_SACD2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|89949599|gb|ABD79614.1| thymidylate synthase [Saccharophagus degradans 2-40] Length = 277 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 163/277 (58%), Positives = 204/277 (73%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV G+ + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL Sbjct: 1 MKQYLDLMRHVRDTGTKKEDRTGTGTVSVFGYQMRFDLSEGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N YL +GV IW+EWA ++G+LGP+YG QWRSWP DG +DQ + +V+ ++ Sbjct: 61 WFLKGETNTQYLTDNGVRIWNEWATEEGDLGPVYGAQWRSWPTPDGGSLDQFALLVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRRHI+SAWN AL+ KMALPPCH LFQFYV + KLSCQLYQRS Sbjct: 121 NKPDSRRHIISAWNPALLPDEGVSPQDNVRNGKMALPPCHTLFQFYVADNKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G + G+F+HT GD HLY NH EQ + QL+R P L Sbjct: 181 ADIFLGVPFNIASYALLTMMVAQVTGLELGDFVHTFGDAHLYLNHLEQVETQLAREPLPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP + D+ SF++EDF L Y+ H I A +S+ Sbjct: 241 PTMKINPEVKDIFSFKFEDFELVDYQAHPHISAPISI 277 >gi|330998283|ref|ZP_08322108.1| thymidylate synthase [Paraprevotella xylaniphila YIT 11841] gi|329568672|gb|EGG50473.1| thymidylate synthase [Paraprevotella xylaniphila YIT 11841] Length = 264 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL +++ G ++ DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYLDLLHRIMEEGVEKSDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG IYG QWRSWPDY G IDQI V ++R Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQIQEAVDTIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV + M LPPCH FQFYV GKLS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLGNMNLPPCHAFFQFYVAKGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V G + G+F+HTLGD H+Y NH EQ LQL+R PR LP+M +NP++ + Sbjct: 181 YALLLMMMAQVTGLKAGDFVHTLGDTHIYKNHLEQVKLQLTREPRPLPRMRLNPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +Y P I VSV Sbjct: 241 DFKFEDFTLENYNPWPHIAGAVSV 264 >gi|304321193|ref|YP_003854836.1| thymidylate synthase [Parvularcula bermudensis HTCC2503] gi|303300095|gb|ADM09694.1| thymidylate synthase [Parvularcula bermudensis HTCC2503] Length = 264 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 165/264 (62%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H++ G R DRTG GT S FG+QMRF+LS GFPL+TTKKVH KSVVHELL Sbjct: 1 MQAYLSLLSHLLDNGVLRDDRTGTGTYSVFGHQMRFELSDGFPLVTTKKVHMKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL HGV IWDEWAD++G LGP+YG QWRSWP G IDQI+ + +R Sbjct: 61 WFLSGDTNIGYLKEHGVRIWDEWADENGNLGPVYGAQWRSWPGPGGKTIDQIAWVQNEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWN +D+MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPTSRRLVVSAWNPGQLDQMALAPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA G G+F+H+ GDVHLY NH +QA QL+R PR LPQ+ + P + D+ Sbjct: 181 YALLTHMLAQSTGLGVGDFVHSFGDVHLYTNHVDQAKQQLARQPRDLPQLRLAPEVSDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYE T+ Y+PH AI A V+V Sbjct: 241 DFRYEHITVEGYDPHPAIKAPVAV 264 >gi|53715018|ref|YP_101010.1| thymidylate synthase [Bacteroides fragilis YCH46] gi|62901263|sp|Q64PV5|TYSY_BACFR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|52217883|dbj|BAD50476.1| thymidylate synthase [Bacteroides fragilis YCH46] Length = 264 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD+ G+LG IYG QWRSWP YDG IDQIS V +++ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYDGGFIDQISEAVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++DF L +Y+PH I KV+V Sbjct: 241 DFQFKDFELVNYDPHPHIAGKVAV 264 >gi|114319533|ref|YP_741216.1| thymidylate synthase [Alkalilimnicola ehrlichii MLHE-1] gi|122312527|sp|Q0ABR1|TYSY_ALHEH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|114225927|gb|ABI55726.1| thymidylate synthase [Alkalilimnicola ehrlichii MLHE-1] Length = 264 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 165/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+ HV G+ + DRTG GT S FG+QMRFDLS+GFP++TTKK+H +S++HELL Sbjct: 1 MQAYLDLMAHVRHHGTPKSDRTGTGTLSVFGHQMRFDLSRGFPVVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GDSN++YL +GVSIWDEWAD++G+LGPIYGVQWRSWP DG +DQ++ +++ LR Sbjct: 61 WFLSGDSNIAYLKANGVSIWDEWADENGDLGPIYGVQWRSWPTPDGRRVDQLAQVLRDLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRRH+VSAWNV + MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 EHPDSRRHLVSAWNVGELPNMALPPCHTLFQFYVAEGRLSCQLYQRSADIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + GEFI T GD HLY NH EQAD QL R P LP++ +NP + DL Sbjct: 181 YALLTHMVAQVCDLKPGEFIWTGGDCHLYTNHLEQADRQLQREPLPLPRLRLNPEVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYED L Y+ H I A V+V Sbjct: 241 AFRYEDIALEGYQHHPPIKAPVAV 264 >gi|220935909|ref|YP_002514808.1| Thymidylate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|254790255|sp|B8GN06|TYSY_THISH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219997219|gb|ACL73821.1| Thymidylate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 277 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 167/277 (60%), Positives = 208/277 (75%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+R +++ G+ + DRTG GTRS FG+QMRFDLSKGFPL+TTKK+H KS++HELL Sbjct: 1 MQPYLDLMRQLLEHGTVKSDRTGTGTRSLFGHQMRFDLSKGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL +GV IWDEWA +DGELGP+YG QWR+WP DG IDQIS +V+ +R Sbjct: 61 WFLKGETNIAYLKDNGVRIWDEWATEDGELGPVYGRQWRAWPTPDGRHIDQISQVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWNVA + +MAL PCH FQFYV +G+LSCQLYQRS Sbjct: 121 TRPDSRRLIVSAWNVAELPDEGISPKDNARAGRMALAPCHTFFQFYVADGRLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLT+M+A V + G+F+HT GDVHLY+NH EQA QLSR P L Sbjct: 181 ADVFLGVPFNIASYALLTLMVAQVTDLEPGDFVHTFGDVHLYSNHVEQAKEQLSREPYPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP + L FRYEDFTL Y+ H I A V++ Sbjct: 241 PKMHLNPEVKSLFDFRYEDFTLEGYQAHPHIKAPVAI 277 >gi|46202071|ref|ZP_00053813.2| COG0207: Thymidylate synthase [Magnetospirillum magnetotacticum MS-1] Length = 264 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR + G + DRTG GT S FG+QMRFDLS GFPL+TTKK+H +S+ ELL Sbjct: 1 MQQYLDLLRRIRAEGVTKTDRTGTGTTSVFGHQMRFDLSAGFPLVTTKKLHTRSIFVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL + VSIWDEWAD DG+LGP+YG QWRSW DG +DQI+ +V+ ++ Sbjct: 61 WFLRGDTNIRYLKDNKVSIWDEWADADGDLGPVYGKQWRSWACPDGRTVDQITQVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A I+ MALPPCHCLFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVAEGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY+NH EQA+LQLSR+P LP++ +NP++ DL Sbjct: 181 YALLTHMMAQVTGLEVGDFVHTFGDAHLYSNHMEQAELQLSRAPLALPRLELNPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D + Y+ HA I A V+V Sbjct: 241 AFTMDDIKVVDYQCHAHISAPVAV 264 >gi|224471861|sp|Q2W7P4|TYSY_MAGMM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 264 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 165/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQYLDLLR + G + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H +S+ ELL Sbjct: 1 MHQYLDLLRRIQAEGVTKTDRTGTGTTSVFGHQMRFDLSRGFPLVTTKKLHTRSIFVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L + VSIWDEWAD +G+LGP+YG QWRSW DG+ +DQI+ +V+ +R Sbjct: 61 WFLRGDTNIGWLKDNKVSIWDEWADANGDLGPVYGKQWRSWACPDGSTVDQITQVVEMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A I+ MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G F+HT GD HLY+NH EQA LQLSR+P LP++ +NP + DL Sbjct: 181 YALLTHMVAQVTGLEVGAFVHTFGDAHLYSNHMEQAALQLSRAPLPLPRLELNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D + Y+ HA I A V+V Sbjct: 241 AFTMDDIKVVDYQCHAHIAAPVAV 264 >gi|146299231|ref|YP_001193822.1| thymidylate synthase [Flavobacterium johnsoniae UW101] gi|189036934|sp|A5FJV8|TYSY_FLAJO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|146153649|gb|ABQ04503.1| thymidylate synthase [Flavobacterium johnsoniae UW101] Length = 283 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 165/286 (57%), Positives = 211/286 (73%), Gaps = 25/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYLDLVKHVLENGNQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IWDEWAD +G+LGP+YG QWR+W + IDQIS ++ L+ Sbjct: 61 WFLKGDTNIKYLKENGVKIWDEWADSNGDLGPVYGHQWRNW---NSEEIDQISELITELK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYV---------DNGK 158 +P SRR IVSAWN +++ +K ALPPCH FQFYV GK Sbjct: 118 TNPNSRRMIVSAWNPSVLPDTKKSFEENVANNKAALPPCHAFFQFYVASPDLEKGETKGK 177 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQLYQRS D+FLG+PFNIASY+LLTMM+A V + GEFIHT GD H+YNNHFEQ +L Sbjct: 178 LSCQLYQRSADIFLGVPFNIASYALLTMMIAQVCDLEPGEFIHTFGDAHIYNNHFEQLEL 237 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QLSR P+ LP+MI+NP I ++ F Y+DFTL Y+PH AI V+V Sbjct: 238 QLSREPKPLPKMILNPEIKNIFDFDYDDFTLVDYDPHPAIQGSVAV 283 >gi|89889399|ref|ZP_01200910.1| thymidylate synthase [Flavobacteria bacterium BBFL7] gi|89517672|gb|EAS20328.1| thymidylate synthase [Flavobacteria bacterium BBFL7] Length = 274 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 164/277 (59%), Positives = 210/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+H++ G+D+ DRTG GTRS FGYQMRF+L +GFP++TTKK+H KS++HELL Sbjct: 1 MKQYHDLLQHILDHGTDKGDRTGTGTRSIFGYQMRFNLEEGFPMVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW+EWA+ +G+LGP+YG QWR+W + D IDQI IV++L+ Sbjct: 61 WFLTGDTNVKYLQDNGVRIWNEWANDNGDLGPVYGHQWRNWNNED---IDQIKDIVKTLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV + KLSCQLYQRS Sbjct: 118 DNPNSRRMMVSAWNPSVMPDTSISFSENVANGKAALPPCHAFFQFYVSDNKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+L TMM+A V GF+YG+FIHT GDVH+Y+NH EQ LQLSR R L Sbjct: 178 ADVFLGVPFNIASYALFTMMMAQVCGFEYGDFIHTFGDVHIYSNHMEQVALQLSRETRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP++ D+ +F++EDFTL +Y PH AI V++ Sbjct: 238 PTMKINPDVKDIFNFKFEDFTLDNYNPHPAIKGAVAI 274 >gi|315225492|ref|ZP_07867305.1| thymidylate synthase [Capnocytophaga ochracea F0287] gi|314944590|gb|EFS96626.1| thymidylate synthase [Capnocytophaga ochracea F0287] Length = 274 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 169/277 (61%), Positives = 208/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLRH++ G + DRTG GT S FGYQMRFDL+KGFPL+TTKK+H KSV++ELL Sbjct: 1 MQTYHDLLRHILDNGYSKDDRTGTGTTSVFGYQMRFDLNKGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGV IW+EWAD++G+LGP+YG QWR W +G IDQI ++V++L+ Sbjct: 61 WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRHW---NGEAIDQIKTVVETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 118 QNPESRRIIVSAWNPSVLPDTGKSFTENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLTMMLA V Q G+F+HT GDVH+YNNH EQ LQLSR+PR L Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +N + DL +F YEDF L Y+P+ I A+VSV Sbjct: 238 PTMHLNRAVKDLFAFDYEDFRLEGYDPYPTIKAQVSV 274 >gi|325298388|ref|YP_004258305.1| Thymidylate synthase [Bacteroides salanitronis DSM 18170] gi|324317941|gb|ADY35832.1| Thymidylate synthase [Bacteroides salanitronis DSM 18170] Length = 264 Score = 358 bits (920), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR + G + DRTG GT S FG+QMRF+L+ GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLRRIRTEGVQKHDRTGTGTISIFGHQMRFNLADGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L GD+NV YL +GV IW+EWAD DG LG IYG QWRSWPDY+G VIDQI+ V+++R Sbjct: 61 WMLSGDTNVHYLQENGVRIWNEWADADGNLGHIYGYQWRSWPDYEGGVIDQIAEAVETIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNVA + M LPPCH FQFYV +GKLS Q+YQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVADGKLSLQMYQRSADCFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHTLGD H+Y NH EQ DLQL+R PR LP+M +NP++ D+ Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTLGDAHIYLNHLEQVDLQLTREPRPLPKMRLNPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y P I KVSV Sbjct: 241 GFKYEDFELTDYNPWPHIAGKVSV 264 >gi|21230261|ref|NP_636178.1| thymidylate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769746|ref|YP_244508.1| thymidylate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|188992959|ref|YP_001904969.1| thymidylate synthase [Xanthomonas campestris pv. campestris str. B100] gi|25091468|sp|Q8PCE7|TYSY_XANCP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|81304300|sp|Q4UR35|TYSY_XANC8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|21111806|gb|AAM40102.1| thymidylate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575078|gb|AAY50488.1| thymidylate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|167734719|emb|CAP52929.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 264 Score = 358 bits (920), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+HV+++G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLELLQHVLEYGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLQGDTNIAYLKDNQVRIWDEWADANGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP++ DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRPLPTLRLNPDVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIDGYDPHPAIKAPVAV 264 >gi|153808882|ref|ZP_01961550.1| hypothetical protein BACCAC_03183 [Bacteroides caccae ATCC 43185] gi|149128708|gb|EDM19926.1| hypothetical protein BACCAC_03183 [Bacteroides caccae ATCC 43185] Length = 264 Score = 358 bits (920), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG IYG QWRSWPDY+G IDQIS +++++ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV +G+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 QNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HT GD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFKFEDFELVNYDPHPHIAGVVAV 264 >gi|120599815|ref|YP_964389.1| thymidylate synthase [Shewanella sp. W3-18-1] gi|146292249|ref|YP_001182673.1| thymidylate synthase [Shewanella putrefaciens CN-32] gi|166231733|sp|A4Y4J1|TYSY_SHEPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231735|sp|A1RME0|TYSY_SHESW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120559908|gb|ABM25835.1| thymidylate synthase [Shewanella sp. W3-18-1] gi|145563939|gb|ABP74874.1| thymidylate synthase [Shewanella putrefaciens CN-32] gi|319425548|gb|ADV53622.1| thymidylate synthase [Shewanella putrefaciens 200] Length = 264 Score = 358 bits (920), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL Sbjct: 1 MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL + VSIWDEWAD +G+LGP+YG QWRSWP G+ IDQIS ++ ++ Sbjct: 61 WFLKGETNIAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 AQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR P+ LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTVLQLSREPKPLPLMTILRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF L +Y PH I A V+V Sbjct: 241 DYQFEDFELTNYNPHPHIKAPVAV 264 >gi|317479583|ref|ZP_07938710.1| thymidylate synthase [Bacteroides sp. 4_1_36] gi|316904245|gb|EFV26072.1| thymidylate synthase [Bacteroides sp. 4_1_36] Length = 264 Score = 358 bits (920), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGVEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWP+Y G IDQIS V++++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPNYKGGFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRDLPQMRINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y PH I KVSV Sbjct: 241 DFKFEDFELINYNPHPHIAGKVSV 264 >gi|34541643|ref|NP_906122.1| thymidylate synthase [Porphyromonas gingivalis W83] gi|188995925|ref|YP_001930177.1| thymidylate synthase [Porphyromonas gingivalis ATCC 33277] gi|34397961|gb|AAQ67021.1| thymidylate synthase [Porphyromonas gingivalis W83] gi|188595605|dbj|BAG34580.1| thymidylate synthase [Porphyromonas gingivalis ATCC 33277] Length = 267 Score = 358 bits (920), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR ++ G + DRTG GT S FG+QM FDL +GFPLLTTK++H KS+++ELL Sbjct: 4 MKQYLDLLRRILDEGVRKEDRTGTGTISVFGHQMCFDLEEGFPLLTTKRLHLKSIIYELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL HGV IW+EWAD++G+LGPIYG QWRSWPDY G IDQ+ +++ LR Sbjct: 64 WFLRGDTNVHYLQEHGVRIWNEWADENGDLGPIYGYQWRSWPDYRGGHIDQMQEVLRQLR 123 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV +WNV + M LPPCHC QFYV +G+LS QLYQRS D FLGIPFNIAS Sbjct: 124 EEPDSRRIIVCSWNVGQLADMHLPPCHCFMQFYVADGRLSLQLYQRSADSFLGIPFNIAS 183 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G F+HTLGD H+Y NH EQ LQLSR PR LP+M++NP + DL Sbjct: 184 YALLLQMIAHVTGLKPGRFVHTLGDAHIYLNHLEQVQLQLSREPRALPRMVLNPEVSDLF 243 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH I V+V Sbjct: 244 DFRYEDFRLEGYDPHPHIAGVVAV 267 >gi|62901348|sp|Q7MTB5|TYSY_PORGI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 264 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR ++ G + DRTG GT S FG+QM FDL +GFPLLTTK++H KS+++ELL Sbjct: 1 MKQYLDLLRRILDEGVRKEDRTGTGTISVFGHQMCFDLEEGFPLLTTKRLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL HGV IW+EWAD++G+LGPIYG QWRSWPDY G IDQ+ +++ LR Sbjct: 61 WFLRGDTNVHYLQEHGVRIWNEWADENGDLGPIYGYQWRSWPDYRGGHIDQMQEVLRQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV +WNV + M LPPCHC QFYV +G+LS QLYQRS D FLGIPFNIAS Sbjct: 121 EEPDSRRIIVCSWNVGQLADMHLPPCHCFMQFYVADGRLSLQLYQRSADSFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G F+HTLGD H+Y NH EQ LQLSR PR LP+M++NP + DL Sbjct: 181 YALLLQMIAHVTGLKPGRFVHTLGDAHIYLNHLEQVQLQLSREPRALPRMVLNPEVSDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH I V+V Sbjct: 241 DFRYEDFRLEGYDPHPHIAGVVAV 264 >gi|325922408|ref|ZP_08184177.1| thymidylate synthase [Xanthomonas gardneri ATCC 19865] gi|325547105|gb|EGD18190.1| thymidylate synthase [Xanthomonas gardneri ATCC 19865] Length = 264 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD DG LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLQGDTNIGYLKDNQVRIWDEWADADGNLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ D + Y+PH AI A V+V Sbjct: 241 AFRFADIAIDGYDPHPAIKAPVAV 264 >gi|58583375|ref|YP_202391.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625200|ref|YP_452572.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166710720|ref|ZP_02241927.1| thymidylate synthase [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575368|ref|YP_001912297.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae PXO99A] gi|62901157|sp|Q5GWB5|TYSY_XANOR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123752707|sp|Q2NZH9|TYSY_XANOM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|58427969|gb|AAW77006.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369140|dbj|BAE70298.1| Thymidylate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519820|gb|ACD57765.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 264 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLQGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHF+QA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFDQARKQLTRTPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|224536152|ref|ZP_03676691.1| hypothetical protein BACCELL_01018 [Bacteroides cellulosilyticus DSM 14838] gi|224522234|gb|EEF91339.1| hypothetical protein BACCELL_01018 [Bacteroides cellulosilyticus DSM 14838] Length = 264 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G + DRTG GT S FG+QMRF++ GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGVHKEDRTGTGTISVFGHQMRFNMEDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL HGV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS V+++ Sbjct: 61 WFLNGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGSIDQISEAVETIL 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I+ M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDINNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y+PH I KVSV Sbjct: 241 DFQYEDFELVNYDPHPHIAGKVSV 264 >gi|254522948|ref|ZP_05135003.1| thymidylate synthase [Stenotrophomonas sp. SKA14] gi|219720539|gb|EED39064.1| thymidylate synthase [Stenotrophomonas sp. SKA14] Length = 264 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD++G+LGP+YG QWRSW DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGGAIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QLSR PR LP++ +NP++ DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPDVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++D + Y+PH AI A V+V Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264 >gi|194364440|ref|YP_002027050.1| thymidylate synthase [Stenotrophomonas maltophilia R551-3] gi|194347244|gb|ACF50367.1| Thymidylate synthase [Stenotrophomonas maltophilia R551-3] Length = 264 Score = 358 bits (918), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKAYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD++G+LGP+YG QWRSW DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGGEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QLSR PR LP++ +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++D + Y+PH AI A V+V Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264 >gi|78046451|ref|YP_362626.1| thymidylate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123744059|sp|Q3BX87|TYSY_XANC5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|78034881|emb|CAJ22526.1| thymidylate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 264 Score = 358 bits (918), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + Y PH AI A V+V Sbjct: 241 GFRFEDIAIEGYAPHPAIKAPVAV 264 >gi|254561824|ref|YP_003068919.1| thymidylate synthetase [Methylobacterium extorquens DM4] gi|254269102|emb|CAX25065.1| thymidylate synthetase [Methylobacterium extorquens DM4] Length = 264 Score = 358 bits (918), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL Sbjct: 1 MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GV+IWDEWAD +G+LGP+YG QWRSW DG+ +DQI+ I+ + Sbjct: 61 WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGSTVDQIAWILDEIA 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY NH EQ LQLSR PR LP++ +NP + L Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + YEPH AI A V+V Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264 >gi|332877806|ref|ZP_08445545.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684271|gb|EGJ57129.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 264 Score = 358 bits (918), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL +++ G ++ DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLHRILEEGVEKSDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG IYG QWRSWPDY G IDQI V +++ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQIQEAVDTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV + M LPPCH FQFYV NGKLS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLGNMNLPPCHAFFQFYVANGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V G + G+F+HTLGD H+Y NH EQ LQL+R PR LP+M +NP++ + Sbjct: 181 YALLLMMMAQVTGLKAGDFVHTLGDTHIYKNHLEQVKLQLTREPRPLPRMKLNPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL Y P I VSV Sbjct: 241 DFKFEDFTLEDYNPWPHIAGAVSV 264 >gi|224025685|ref|ZP_03644051.1| hypothetical protein BACCOPRO_02425 [Bacteroides coprophilus DSM 18228] gi|224018921|gb|EEF76919.1| hypothetical protein BACCOPRO_02425 [Bacteroides coprophilus DSM 18228] Length = 264 Score = 358 bits (918), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL + G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLHRIRTEGVRKDDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY+G IDQIS V+++R Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYEGGFIDQISEAVETIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNVA + M LPPCH FQFYV +G+LS Q+YQRS D FLG+PFNIAS Sbjct: 121 KNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVADGQLSLQMYQRSADSFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ DLQLSR PR LP+MI+NP++ ++ Sbjct: 181 YALLLQMMAQVTGLKPGDFIHTLGDAHIYLNHLEQVDLQLSREPRPLPRMILNPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+P I KVSV Sbjct: 241 DFKYEDFQLEGYDPWPHIAGKVSV 264 >gi|16126363|ref|NP_420927.1| thymidylate synthase [Caulobacter crescentus CB15] gi|221235145|ref|YP_002517581.1| thymidylate synthase [Caulobacter crescentus NA1000] gi|25091488|sp|Q9A6H0|TYSY_CAUCR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|13423613|gb|AAK24095.1| thymidylate synthase [Caulobacter crescentus CB15] gi|220964317|gb|ACL95673.1| thymidylate synthase [Caulobacter crescentus NA1000] Length = 279 Score = 357 bits (917), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 165/262 (62%), Positives = 206/262 (78%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL LL +++ G R DRTG GT FG Q+RFDL+KGFP+LTTKK+H +S++ ELLWF Sbjct: 19 QYLTLLADILENGVQRGDRTGTGTLGVFGRQIRFDLAKGFPVLTTKKLHLRSIIIELLWF 78 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YL +GV IWDEWAD++G+LGP+YG QWRSW DG VIDQIS++V++L+A+ Sbjct: 79 LKGDTNIAYLKDNGVRIWDEWADENGDLGPVYGKQWRSWATPDGRVIDQISALVENLKAN 138 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRRHIV+AWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 139 PNSRRHIVTAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 198 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT+M+A V+G + GEF+HT GD HLY NH +QA QL+R P P M I + DL F Sbjct: 199 LLTLMVAKVVGLEPGEFVHTFGDAHLYLNHLDQAREQLTREPFDFPTMKI-ADKRDLFGF 257 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YEDFTL Y+ H I A+VSV Sbjct: 258 EYEDFTLEGYQAHPHIKAEVSV 279 >gi|289663561|ref|ZP_06485142.1| thymidylate synthase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670949|ref|ZP_06492024.1| thymidylate synthase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 264 Score = 357 bits (917), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLQGDTNIGYLSNNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NH +QA QL+R+PR LP + +NP++ DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHVDQAREQLTRTPRALPTLRLNPDVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|83310426|ref|YP_420690.1| thymidylate synthase [Magnetospirillum magneticum AMB-1] gi|82945267|dbj|BAE50131.1| Thymidylate synthase [Magnetospirillum magneticum AMB-1] Length = 275 Score = 357 bits (917), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 +HQYLDLLR + G + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H +S+ ELL Sbjct: 12 LHQYLDLLRRIQAEGVTKTDRTGTGTTSVFGHQMRFDLSRGFPLVTTKKLHTRSIFVELL 71 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L + VSIWDEWAD +G+LGP+YG QWRSW DG+ +DQI+ +V+ +R Sbjct: 72 WFLRGDTNIGWLKDNKVSIWDEWADANGDLGPVYGKQWRSWACPDGSTVDQITQVVEMIR 131 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A I+ MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 132 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 191 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G F+HT GD HLY+NH EQA LQLSR+P LP++ +NP + DL Sbjct: 192 YALLTHMVAQVTGLEVGAFVHTFGDAHLYSNHMEQAALQLSRAPLPLPRLELNPEVKDLF 251 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D + Y+ HA I A V+V Sbjct: 252 AFTMDDIKVVDYQCHAHIAAPVAV 275 >gi|190572858|ref|YP_001970703.1| thymidylate synthase [Stenotrophomonas maltophilia K279a] gi|190010780|emb|CAQ44389.1| putative thymidylate synthase [Stenotrophomonas maltophilia K279a] Length = 264 Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKAYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD++G+LGP+YG QWRSW DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGREIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QLSR PR LP++ +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++D + Y+PH AI A V+V Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264 >gi|332291421|ref|YP_004430030.1| thymidylate synthase [Krokinobacter diaphorus 4H-3-7-5] gi|332169507|gb|AEE18762.1| thymidylate synthase [Krokinobacter diaphorus 4H-3-7-5] Length = 274 Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 160/277 (57%), Positives = 212/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+V+ELL Sbjct: 1 MKQYHDLIKHVLENGNQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD++G+LGP+YG QWR+W +G+ IDQI IV++L+ Sbjct: 61 WFLQGDTNIKYLQENGVRIWNEWADENGDLGPVYGYQWRNW---NGDEIDQIKDIVETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 TNPNSRRMLVSAWNPSVMPDTSASFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+Y+NH EQ +LQLSR RTL Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYSNHMEQVELQLSREFRTL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + INP++ D+ F ++DFTL +Y PH I V++ Sbjct: 238 PTLKINPDVKDIFGFTFDDFTLENYNPHPHIKGAVAI 274 >gi|225011474|ref|ZP_03701912.1| Thymidylate synthase [Flavobacteria bacterium MS024-2A] gi|225003977|gb|EEG41949.1| Thymidylate synthase [Flavobacteria bacterium MS024-2A] Length = 274 Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 160/277 (57%), Positives = 212/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HV+ GS++ DRTG GT+S FGYQMRFDLSKGFPL+TTKK+H+KS+VHELL Sbjct: 1 MKQYLDLVNHVLATGSEKTDRTGTGTKSVFGYQMRFDLSKGFPLVTTKKIHFKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD+ G LGP+YG QWR+W + IDQI ++ +L+ Sbjct: 61 WFLKGDTNIEYLQENGVRIWNEWADEKGNLGPVYGHQWRNW---NSEGIDQIQEVINTLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ +K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 TNPDSRRMLVSAWNPSVLPDTKVSFSKNVANNKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLT+M+A V G++ G+F+H+ GDVH+Y+NHFEQ QLSR+P+ L Sbjct: 178 ADVFLGVPFNIASYALLTLMVAQVCGYEPGDFVHSFGDVHIYSNHFEQLKEQLSRAPKAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP I ++ F Y+DF L +Y+P+ I KV++ Sbjct: 238 PEMHLNPEIKNIFDFTYDDFELINYDPYPLIKGKVAI 274 >gi|295135495|ref|YP_003586171.1| thymidylate synthase [Zunongwangia profunda SM-A87] gi|294983510|gb|ADF53975.1| thymidylate synthase [Zunongwangia profunda SM-A87] Length = 274 Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 161/277 (58%), Positives = 211/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL++++ G+++ DRTG GT+S FGYQMRF+LS+GFP++TTKKVH KS+++ELL Sbjct: 1 MKQYHDLLQYILDHGAEKGDRTGTGTKSVFGYQMRFNLSEGFPMVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD+ G+LGP+YG QWR+W + IDQIS I+++L+ Sbjct: 61 WFLKGDTNIKYLQENGVRIWNEWADEHGDLGPVYGHQWRNW---NSEEIDQISEIIETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 TNPNSRRMLVSAWNPSVMPDTAVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+L TMM+A V G++ G+FIHT GDVH+Y+NH EQ LQLSR+PR L Sbjct: 178 ADVFLGVPFNIASYALFTMMMAQVCGYEPGDFIHTFGDVHIYSNHMEQVKLQLSRTPRAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP I ++ F +EDF L Y+PH AI KV+V Sbjct: 238 PIMKMNPEITNIFDFSFEDFKLEGYDPHPAIKGKVAV 274 >gi|240139408|ref|YP_002963883.1| thymidylate synthetase [Methylobacterium extorquens AM1] gi|240009380|gb|ACS40606.1| thymidylate synthetase [Methylobacterium extorquens AM1] Length = 264 Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL Sbjct: 1 MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GV+IWDEWAD +G+LGP+YG QWRSW DG +DQI+ I+ + Sbjct: 61 WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGGTVDQIAWILDEIA 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY NH EQ LQLSR PR LP++ +NP + L Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + YEPH AI A V+V Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264 >gi|302383585|ref|YP_003819408.1| thymidylate synthase [Brevundimonas subvibrioides ATCC 15264] gi|302194213|gb|ADL01785.1| thymidylate synthase [Brevundimonas subvibrioides ATCC 15264] Length = 288 Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 165/262 (62%), Positives = 201/262 (76%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LLR ++ G R DRTG GT FG QMRFDLSKGFPLLTTKK+H +S++ ELLWF Sbjct: 28 QYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPLLTTKKLHLRSIIVELLWF 87 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG++N+ +L +G SIWDEWAD+ GELGP+YG QWRSW +G IDQI+ +++ L+ + Sbjct: 88 LRGETNIRWLKDNGCSIWDEWADESGELGPVYGKQWRSWAAPNGESIDQIARLIEGLKTN 147 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRRHIVSAWN A I+ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 148 PNSRRHIVSAWNPADIEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 207 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLTMM+A V+G + G+F+HT GD HLY+NH EQA LQL+R P LP M I P DL +F Sbjct: 208 LLTMMVAEVVGLEPGDFVHTFGDAHLYSNHIEQAQLQLTRQPLALPTMTIAPK-RDLFAF 266 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 DF L YE H I A V++ Sbjct: 267 EPGDFVLSGYEAHPHIKAAVAI 288 >gi|256820074|ref|YP_003141353.1| thymidylate synthase [Capnocytophaga ochracea DSM 7271] gi|256581657|gb|ACU92792.1| thymidylate synthase [Capnocytophaga ochracea DSM 7271] Length = 274 Score = 357 bits (916), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 168/277 (60%), Positives = 208/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLRH++ G + DRTG GT S FGYQMRFDL+KGFPL+TTKK+H KSV++ELL Sbjct: 1 MQTYHDLLRHILDNGYSKDDRTGTGTTSVFGYQMRFDLNKGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGV IW+EWAD++G+LGP+YG QWR W +G IDQI ++V++L+ Sbjct: 61 WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRHW---NGEAIDQIKTVVETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 118 QNPESRRIIVSAWNPSVLPDTGKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLTMMLA V Q G+F+HT GDVH+YNNH EQ LQLSR+PR L Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +N + DL +F Y+DF L Y+P+ I A+VSV Sbjct: 238 PTMHLNRAVKDLFAFDYDDFRLEGYDPYPTIKAQVSV 274 >gi|114798205|ref|YP_759189.1| thymidylate synthase [Hyphomonas neptunium ATCC 15444] gi|122942752|sp|Q0C504|TYSY_HYPNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|114738379|gb|ABI76504.1| thymidylate synthase [Hyphomonas neptunium ATCC 15444] Length = 264 Score = 357 bits (916), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY LLR +++ G R DRTGVGT FG QMRFDLS+GFP++TTK++H +S++ ELL Sbjct: 1 MQQYQALLRDILENGHKRGDRTGVGTIGVFGRQMRFDLSEGFPMVTTKRLHLRSIIVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL +GVSIWDEWAD++G+LGP+YG QWRSW +G IDQI ++ +R Sbjct: 61 WFLRGDTNIAYLKENGVSIWDEWADENGDLGPVYGKQWRSWATPNGEAIDQIQWVLNEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++ MALPPCHCLFQF V +GKL+CQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNPADVNDMALPPCHCLFQFNVMDGKLNCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G Q GEF+HT GD HLY NH EQA+LQL+R PR LP + +NP+ DL Sbjct: 181 YALLTMMMARATGLQPGEFVHTFGDAHLYLNHLEQAELQLTREPRDLPTIHMNPDKADLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF + Y PH I A V+V Sbjct: 241 GWEYEDFRVDGYAPHPHIKAPVAV 264 >gi|294665699|ref|ZP_06730974.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604541|gb|EFF47917.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 347 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 159/261 (60%), Positives = 206/261 (78%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELLWFL Sbjct: 87 YLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELLWFL 146 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ +P Sbjct: 147 KGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIKRNP 206 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIASY+L Sbjct: 207 DSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIASYAL 266 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL +FR Sbjct: 267 LTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRAPRALPTLRLNPEVTDLFAFR 326 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y+PH AI A V+V Sbjct: 327 FEDIAIEGYDPHPAIKAPVAV 347 >gi|226313973|ref|YP_002773869.1| thymidylate synthase [Brevibacillus brevis NBRC 100599] gi|254790230|sp|C0ZI91|TYSY_BREBN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226096923|dbj|BAH45365.1| thymidylate synthase [Brevibacillus brevis NBRC 100599] Length = 264 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 158/264 (59%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL + ++ G + DRTG GT S FG+QMRFDLS+GFP++TTKK+H KS++HELL Sbjct: 1 MKQYLDLCQRILDEGVIKEDRTGTGTTSVFGHQMRFDLSEGFPMVTTKKLHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW+EWAD++G+LGP+YG QWRS+ DG +DQI ++ ++ Sbjct: 61 WFLSGDTNVRYLQENGVRIWNEWADENGDLGPVYGSQWRSFTGRDGKTVDQIQWVIDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +DKMALPPCH LFQFYV NGKLSCQLYQRSGD FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPAELDKMALPPCHLLFQFYVANGKLSCQLYQRSGDTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT+GD HLY NH EQ LQL+R P+ LP++++NP++ + Sbjct: 181 YALLTHMVAHVTGLEVGDFVHTIGDAHLYLNHIEQVKLQLTREPKPLPKLVLNPDVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YED + YE H I +V+V Sbjct: 241 DFKYEDIEIVGYESHPHIKGEVAV 264 >gi|332879843|ref|ZP_08447532.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682220|gb|EGJ55128.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 274 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 166/277 (59%), Positives = 207/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLRH++ G + DRTG GT S FGYQMRFDL++GFPL+TTKK+H KSV++ELL Sbjct: 1 MKIYQDLLRHILANGYSKDDRTGTGTTSVFGYQMRFDLNEGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ HGV IW+EWAD +G+LGP+YG QWR+W +G IDQ+ ++V +L+ Sbjct: 61 WFLKGDTNIGYLNEHGVRIWNEWADPNGDLGPVYGAQWRNW---NGEAIDQLKAVVDTLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 118 HNPESRRIIVSAWNPSVLPDTRKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLTMMLA V Q G+F+HT GDVH+YNNH EQ LQLSR+PR L Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +F Y DF L Y+P+ I A V+V Sbjct: 238 PTMHLNPAVKDLFAFNYTDFRLEGYDPYPTIKAAVAV 274 >gi|84496920|ref|ZP_00995774.1| thymidylate synthase [Janibacter sp. HTCC2649] gi|84383688|gb|EAP99569.1| thymidylate synthase [Janibacter sp. HTCC2649] Length = 263 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 168/264 (63%), Positives = 205/264 (77%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL ++ G D+ DRTG GTRS FG+QMRFDLS GFP++TTKKVH KS++ ELL Sbjct: 1 MRQYHDLLNRILDEGVDKSDRTGTGTRSVFGHQMRFDLSDGFPVVTTKKVHLKSIIGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L G+SIWDEWAD++G+LGP+YG QWRSWP DG +DQI+ +++ +R Sbjct: 61 WFLRGDTNVRWLQERGISIWDEWADENGDLGPVYGHQWRSWPTPDGRQVDQIAKVIEGIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA +D MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHALFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A + + GEF+HTLGD HLY+NH EQA LQL+R PR LP M I P + Sbjct: 181 YALLTMMVAQLTDLEPGEFVHTLGDAHLYSNHLEQARLQLTREPRDLPTMRIAPKTA-ID 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +DF L Y+PH I A ++V Sbjct: 240 DFDLDDFELVGYDPHPGIKAPIAV 263 >gi|298372619|ref|ZP_06982609.1| thymidylate synthase [Bacteroidetes oral taxon 274 str. F0058] gi|298275523|gb|EFI17074.1| thymidylate synthase [Bacteroidetes oral taxon 274 str. F0058] Length = 264 Score = 356 bits (914), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL ++ G++R DRTG GT FG+QMRFDL +GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYHDLLNRILNEGTERSDRTGTGTIGIFGHQMRFDLRQGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GVSIW+EWAD +G+LG IYG QWRSW YDG IDQIS ++++ Sbjct: 61 WFLKGDTNVRYLQDNGVSIWNEWADANGDLGHIYGYQWRSWRGYDGETIDQISEAEETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DPYSRR IV+AWNV + M LPPCH FQFYV NGKLS Q+YQRS DVFLG+PFNIAS Sbjct: 121 NDPYSRRIIVNAWNVGDLKNMNLPPCHTFFQFYVANGKLSLQMYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G + GEF+HTLGD H+Y NH EQ LQL+R PR LP+M IN + + Sbjct: 181 YALLLQMMAQTTGLEAGEFVHTLGDAHIYKNHLEQVQLQLTREPRPLPKMNINKEVRSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+P+ I KV+V Sbjct: 241 DFRYEDFCLTDYDPYPHIAGKVAV 264 >gi|218530838|ref|YP_002421654.1| Thymidylate synthase [Methylobacterium chloromethanicum CM4] gi|254790242|sp|B7KQG2|TYSY_METC4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|218523141|gb|ACK83726.1| Thymidylate synthase [Methylobacterium chloromethanicum CM4] Length = 264 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL Sbjct: 1 MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GV+IWDEWAD +G+LGP+YG QWRSW +G +DQI+ I+ + Sbjct: 61 WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPEGGTVDQIAWILDEIA 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY NH EQ LQLSR PR LP++ +NP + L Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + YEPH AI A V+V Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264 >gi|91794130|ref|YP_563781.1| thymidylate synthase [Shewanella denitrificans OS217] gi|123060707|sp|Q12KG8|TYSY_SHEDO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91716132|gb|ABE56058.1| thymidylate synthase [Shewanella denitrificans OS217] Length = 264 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L+ H++ G+ + DRTG GTRS FGYQMRFDL++GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLALMEHILAHGAVKTDRTGTGTRSVFGYQMRFDLNQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH H VSIWDEWAD G LGP+YG QWRSWP G +DQIS I++ ++ Sbjct: 61 WFLQGDTNVAYLHEHNVSIWDEWADDKGNLGPVYGAQWRSWPTQSGKAVDQISQIIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV +DKMAL PCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TQPDSRRLIVSAWNVGELDKMALAPCHALFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR P LPQM I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTKLQLSREPHALPQMNILRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L +Y+PH I A V++ Sbjct: 241 DYQFDDFELVNYQPHPHIKAPVAI 264 >gi|329911715|ref|ZP_08275594.1| Thymidylate synthase [Oxalobacteraceae bacterium IMCC9480] gi|327545812|gb|EGF30934.1| Thymidylate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 264 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+++ DRTG GTRS FGYQMRF L GFPLLTTKK+H KS++HEL+ Sbjct: 1 MRQYLDFMRHVQQHGTEKTDRTGTGTRSVFGYQMRFALQDGFPLLTTKKLHLKSILHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N++YL +GVSIWD+WAD DG LGPIYG QWRSWP DG+ IDQI+ ++ ++ Sbjct: 61 WFLNGATNIAYLKENGVSIWDDWADADGNLGPIYGYQWRSWPTPDGSHIDQITQVMDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I M LPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRMIVSAWNVADIPNMKLPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + G+F+ T GD HLY+NH EQ DLQL+R+P+ LP ++I + Sbjct: 181 YALLTHMMAQQAGLEVGDFVWTGGDCHLYSNHMEQVDLQLTRTPQALPTLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y P A I A V+V Sbjct: 241 DYRFEDFEITGYTPDAHIKAPVAV 264 >gi|15838923|ref|NP_299611.1| thymidylate synthase [Xylella fastidiosa 9a5c] gi|22096234|sp|Q9PB13|TYSY_XYLFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|9107503|gb|AAF85131.1|AE004044_2 thymidylate synthase [Xylella fastidiosa 9a5c] Length = 264 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N++YL +H V IWDEWAD GELGP+YG QWR W DG+ IDQI +++ ++ Sbjct: 61 WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLLEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA V G G+F+HTLGD HLY NH EQA +QL R PR P +++NP + DL Sbjct: 181 YALLTHMLAQVTGLAVGDFVHTLGDAHLYANHVEQASVQLERVPRPQPVLMLNPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y+D + Y+P+ AI A V+V Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264 >gi|42524608|ref|NP_969988.1| thymidylate synthase [Bdellovibrio bacteriovorus HD100] gi|62901320|sp|Q6MID2|TYSY_BDEBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|39576818|emb|CAE78047.1| thyA [Bdellovibrio bacteriovorus HD100] Length = 264 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ V++ G + DRTG GT S FGYQMR++L +GFPLLTTKK+H +S+ HELL Sbjct: 1 MKQYHDLIKTVLEHGVKKEDRTGTGTISMFGYQMRYNLQEGFPLLTTKKLHTRSIFHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YLH + V+IWDEWAD++G LGP+YG QWRSW DG IDQI+++V+ ++ Sbjct: 61 WFLKGETNIKYLHDNKVTIWDEWADENGNLGPVYGKQWRSWETADGRTIDQITNVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V A+N +DKMALPPCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPNSRRMLVVAFNPGDVDKMALPPCHAFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + G+F+HTLGD HLY NH EQA+LQL+R R LPQ+ +NP DL Sbjct: 181 YALLTHMIAQVCDLEVGDFVHTLGDAHLYLNHLEQANLQLTREFRPLPQLKLNPAKKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YED + Y+PH AI A+V+V Sbjct: 241 DFTYEDIEIIGYDPHPAIKAEVAV 264 >gi|163753075|ref|ZP_02160199.1| Thymidylate synthase [Kordia algicida OT-1] gi|161326807|gb|EDP98132.1| Thymidylate synthase [Kordia algicida OT-1] Length = 274 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 158/277 (57%), Positives = 211/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS++HELL Sbjct: 1 MRQYLDLVKHVLEHGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL +GV IW+EWAD++G+LGP+YG QWR+W + IDQ+S ++++L+ Sbjct: 61 WFIKGDTNIKYLQENGVRIWNEWADENGDLGPVYGHQWRNW---NSESIDQLSEVIETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMMVSAWNPSVLPNTKVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLTMM+A V G++YG+FIHT GD H+Y+NHFEQ LQL+R P L Sbjct: 178 ADVFLGVPFNIASYALLTMMMAQVCGYEYGDFIHTFGDAHIYSNHFEQVKLQLTREPYPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP I + F +EDF L +Y+ H I V++ Sbjct: 238 PTMKINPEIKSIFDFTFEDFELVNYQHHPRIKGAVAI 274 >gi|148361180|ref|YP_001252387.1| thymidylate synthase [Legionella pneumophila str. Corby] gi|296108515|ref|YP_003620216.1| thymidylate synthase [Legionella pneumophila 2300/99 Alcoy] gi|166231709|sp|A5II41|TYSY_LEGPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148282953|gb|ABQ57041.1| thymidylate synthase (TS) [Legionella pneumophila str. Corby] gi|295650417|gb|ADG26264.1| thymidylate synthase [Legionella pneumophila 2300/99 Alcoy] Length = 264 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL Sbjct: 1 MKTYLQLLEHILQQGVEKSDRTGTGTLSVFGYQMRFDLTKGFPLVTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD +G+LGP+YG QWRSWP DG+ IDQ+S +VQ ++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGHTIDQLSDVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A EFI T GD HLY NH EQA +QL+R P LP + I L Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLTIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +Y+ H AI A ++V Sbjct: 241 DYAYEDFEFVNYQSHPAIKAPIAV 264 >gi|54298860|ref|YP_125229.1| thymidylate synthase [Legionella pneumophila str. Paris] gi|62901234|sp|Q5X119|TYSY_LEGPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|53752645|emb|CAH14080.1| Thymidylate synthase [Legionella pneumophila str. Paris] Length = 264 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL Sbjct: 1 MKTYLQLLEHILQQGVEKSDRTGTGTLSVFGYQMRFDLTKGFPLVTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD +G+LGP+YG QWRSWP DG+ IDQ+S +VQ ++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGHTIDQLSDVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A EFI T GD HLY NH EQA +QL+R P LP + I L Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLTIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +Y+ H AI A ++V Sbjct: 241 DYAYEDFEFLNYQSHPAIKAPIAV 264 >gi|325928230|ref|ZP_08189435.1| thymidylate synthase [Xanthomonas perforans 91-118] gi|325541390|gb|EGD12927.1| thymidylate synthase [Xanthomonas perforans 91-118] Length = 264 Score = 355 bits (911), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 158/264 (59%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+HV++ G+++ DRTG GTRS FG+QMRF L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFHLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NG+LSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGRLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED ++ Y+PH AI A V+V Sbjct: 241 AFRFEDISIEGYDPHPAIKAPVAV 264 >gi|126173426|ref|YP_001049575.1| thymidylate synthase [Shewanella baltica OS155] gi|166231730|sp|A3D1U3|TYSY_SHEB5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|125996631|gb|ABN60706.1| thymidylate synthase [Shewanella baltica OS155] Length = 264 Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL Sbjct: 1 MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV+YL + VSIWDEWAD++G+LGP+YG QWRSWP G+ IDQIS ++ ++ Sbjct: 61 WFLKGETNVAYLRENKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR P LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRRPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L +Y PH I A V+V Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264 >gi|327538952|gb|EGF25590.1| thymidylate synthase [Rhodopirellula baltica WH47] Length = 301 Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL V+ G DR DRTGVGTRS FG QMRFDL++GFPLLTTKK+H +S++HELL Sbjct: 38 MQGYLQLLDEVLHDGIDRDDRTGVGTRSLFGRQMRFDLAEGFPLLTTKKLHIRSILHELL 97 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL + VSIWDEWAD+ G+LGP+YG QWRSW +G+ +DQI+ + +R Sbjct: 98 WFLRGDTNIGYLKENKVSIWDEWADEAGDLGPVYGHQWRSWEGANGDTVDQIAWVENEIR 157 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + KMALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 158 TNPRSRRLVVSAWNVADVPKMALPPCHLLFQFYVSGGRLSCQLYQRSADLFLGVPFNIAS 217 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y++LT M+A V G + GEF+HTLGDVHLY+NHF+QA QLSR+PR LP I ++ + Sbjct: 218 YAMLTSMMAHVTGLKPGEFVHTLGDVHLYSNHFDQAREQLSRTPRPLPTFHIKRDVASVT 277 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++DF L +Y+PH I A V+V Sbjct: 278 DFQFDDFELTNYDPHPHIKAPVAV 301 >gi|315498745|ref|YP_004087549.1| thymidylate synthase [Asticcacaulis excentricus CB 48] gi|315416757|gb|ADU13398.1| thymidylate synthase [Asticcacaulis excentricus CB 48] Length = 268 Score = 355 bits (910), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 159/263 (60%), Positives = 205/263 (77%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLDL+R ++ G R DRTG GT+ FG Q+RFDL++GFPLLTTKKVH+KSV ELLW Sbjct: 7 YQYLDLVRDIMANGVTRMDRTGTGTKGVFGRQIRFDLAEGFPLLTTKKVHFKSVAVELLW 66 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGD+N+ YL HGVSIWDEWAD++G+LGP+YG QWRSW DG VIDQ+S ++++L+ Sbjct: 67 FLRGDTNIKYLKDHGVSIWDEWADENGDLGPVYGKQWRSWAAPDGRVIDQMSQLIENLKT 126 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P+SRRH++SAWN + ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 127 NPHSRRHVISAWNPSEVEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASY 186 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A +G + G+F+H+ GDVHLY NH EQA QLSR P + P + + +L + Sbjct: 187 ALLTHMVAQAVGLEVGDFVHSFGDVHLYLNHVEQAQTQLSRDPMSFPTLKLAAK-TNLFA 245 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 F Y D L Y+ H A+ A V+V Sbjct: 246 FDYADIELIGYQSHGALKAPVAV 268 >gi|32477613|ref|NP_870607.1| thymidylate synthase [Rhodopirellula baltica SH 1] gi|62901353|sp|Q7UID0|TYSY_RHOBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|32448167|emb|CAD77684.1| thymidylate synthase [Rhodopirellula baltica SH 1] Length = 264 Score = 355 bits (910), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL V+ G DR DRTGVGTRS FG QMRFDL++GFPLLTTKK+H +S++HELL Sbjct: 1 MQGYLQLLDEVLHDGIDRDDRTGVGTRSLFGRQMRFDLAEGFPLLTTKKLHIRSILHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL + VSIWDEWAD+ G+LGP+YG QWRSW +G+ +DQI+ + +R Sbjct: 61 WFLRGDTNIGYLKENKVSIWDEWADEAGDLGPVYGHQWRSWEGANGDTVDQIAWVENEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + KMALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPRSRRLVVSAWNVADVPKMALPPCHLLFQFYVSGGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y++LT M+A V G + GEF+HTLGDVHLY+NHF+QA QLSR+PR LP I ++ + Sbjct: 181 YAMLTSMMAHVTGLKPGEFVHTLGDVHLYSNHFDQAREQLSRTPRPLPTFHIKRDVASVT 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++DF L +Y+PH I A V+V Sbjct: 241 DFQFDDFELTNYDPHPHIKAPVAV 264 >gi|332140100|ref|YP_004425838.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|332143102|ref|YP_004428840.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550122|gb|AEA96840.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553124|gb|AEA99842.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype'] Length = 277 Score = 355 bits (910), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 163/277 (58%), Positives = 205/277 (74%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL L+RHV G ++DRTG GT S FGYQMRF+L +GFPL+TTKK H KS++HELL Sbjct: 1 MKEYLALMRHVRDTGVKKKDRTGTGTLSVFGYQMRFNLQEGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL HGV IWDEWA +GELGP+YG QWRSW DG +DQI+ +V+ ++ Sbjct: 61 WFLKGETNIAYLKEHGVKIWDEWATDEGELGPVYGHQWRSWDRGDGTSVDQIAEVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVS WN A++ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 121 NNPDSRRLIVSGWNPAVLPDTNYSPKENAAMGKQALPPCHTLFQFYVLDGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GD+FLGIPFNIASY+LLTMM+A V + G+FIHTLGD HLY+NH EQ +LQLSR P Sbjct: 181 GDIFLGIPFNIASYALLTMMIAQVCDLEPGDFIHTLGDAHLYSNHLEQVELQLSREPFER 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP + D+ F ++DFTL++Y+ H I A V++ Sbjct: 241 PTMEINPEVKDIFGFTFDDFTLKNYQSHPHIKAPVAI 277 >gi|54295693|ref|YP_128108.1| thymidylate synthase [Legionella pneumophila str. Lens] gi|62901230|sp|Q5WSU5|TYSY_LEGPL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|53755525|emb|CAH17024.1| Thymidylate synthase [Legionella pneumophila str. Lens] Length = 264 Score = 355 bits (910), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL Sbjct: 1 MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAKGFPLVTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD +G+LGP+YG QWRSWP DG IDQ+S +VQ ++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGGTIDQLSDVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A EFI T GD HLY NH EQA QL+R P LP + I L Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQTQLTREPLPLPSLAIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +Y+ H AI A ++V Sbjct: 241 DYAYEDFEFVNYQSHPAIKAPIAV 264 >gi|52843063|ref|YP_096862.1| thymidylate synthase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|62901244|sp|Q5ZRL3|TYSY_LEGPH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|52630174|gb|AAU28915.1| thymidylate synthase (TS) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 264 Score = 354 bits (909), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H+++ G ++ DRTG GT S FGYQMRFDL++GFPL+TTKK+H +S+VHELL Sbjct: 1 MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAQGFPLVTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD +G+LGP+YG QWRSWP DG IDQ+S +VQ ++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGRTIDQLSEVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A EFI T GD HLY NH EQA +QL+R P LP + I L Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLAIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +Y+ H AI A ++V Sbjct: 241 DYAYEDFEFLNYQSHPAIKAPIAV 264 >gi|217974282|ref|YP_002359033.1| thymidylate synthase [Shewanella baltica OS223] gi|304409350|ref|ZP_07390970.1| thymidylate synthase [Shewanella baltica OS183] gi|307303708|ref|ZP_07583461.1| thymidylate synthase [Shewanella baltica BA175] gi|254790249|sp|B8EBR5|TYSY_SHEB2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|217499417|gb|ACK47610.1| Thymidylate synthase [Shewanella baltica OS223] gi|304351868|gb|EFM16266.1| thymidylate synthase [Shewanella baltica OS183] gi|306912606|gb|EFN43029.1| thymidylate synthase [Shewanella baltica BA175] Length = 264 Score = 354 bits (909), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL Sbjct: 1 MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV+YL + VSIWDEWAD +G+LGP+YG QWRSWP G+ IDQIS ++ ++ Sbjct: 61 WFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR P LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L +Y PH I A V+V Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264 >gi|197104285|ref|YP_002129662.1| thymidylate synthase [Phenylobacterium zucineum HLK1] gi|196477705|gb|ACG77233.1| thymidylate synthase [Phenylobacterium zucineum HLK1] Length = 286 Score = 354 bits (909), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 169/267 (63%), Positives = 203/267 (76%), Gaps = 6/267 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LL +++ G+ R DRTG GT FG QMRFDLS+GFPLLTTKK+H KS++ ELLWF Sbjct: 21 QYLNLLADILETGAARGDRTGTGTLGVFGRQMRFDLSQGFPLLTTKKLHRKSIILELLWF 80 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD+NV +L GVSIWDEWAD DGELGP+YG QWRSW DG VIDQIS +V SL+ + Sbjct: 81 LRGDTNVRWLQERGVSIWDEWADADGELGPVYGKQWRSWAAPDGRVIDQISGVVNSLKTN 140 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVFLGIPFN 177 P SRRHIVSAWN A ++ MALPPCHCLFQF+V +LSCQLYQRS DVFLG+PFN Sbjct: 141 PESRRHIVSAWNPAEVEDMALPPCHCLFQFFVAPDRDGVKRLSCQLYQRSADVFLGVPFN 200 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 IASY+LLT+M+A V G+ GEF+HTLGD HLY NH EQA +QL+R P LP M + + Sbjct: 201 IASYALLTLMMAKVTGYAPGEFVHTLGDAHLYLNHVEQARIQLAREPMPLPVMHVA-DRD 259 Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264 DL +F YEDF L Y+ H +I A ++V Sbjct: 260 DLFAFAYEDFKLEGYQAHPSIPAPIAV 286 >gi|86131361|ref|ZP_01049959.1| Thymidylate synthase [Dokdonia donghaensis MED134] gi|85817806|gb|EAQ38974.1| Thymidylate synthase [Dokdonia donghaensis MED134] Length = 274 Score = 354 bits (909), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 160/277 (57%), Positives = 210/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV+ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLMKHVLAEGNFKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LGP+YG QWR+W +G+ IDQI IV++L+ Sbjct: 61 WFLQGDTNVKYLQENGVRIWNEWADENGDLGPVYGYQWRNW---NGDEIDQIKDIVETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 KNPNSRRMLVSAWNPSVMPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR RTL Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQVELQLSREIRTL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + INP + D+ F ++DFTL +Y PH I V+V Sbjct: 238 PTLKINPEVKDIFGFTFDDFTLENYNPHPHIKGAVAV 274 >gi|255038746|ref|YP_003089367.1| thymidylate synthase [Dyadobacter fermentans DSM 18053] gi|254951502|gb|ACT96202.1| thymidylate synthase [Dyadobacter fermentans DSM 18053] Length = 273 Score = 354 bits (909), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 167/273 (61%), Positives = 201/273 (73%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLRH++K G + DRTG GT S FGYQMRFDL KGFPL+TTKKVH KS++HELL Sbjct: 1 MQQYHDLLRHILKEGVRKTDRTGTGTISVFGYQMRFDLKKGFPLVTTKKVHTKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL H VSIWDEWAD++G+LGP+YG QWRSW DG +DQ+ +++ L+ Sbjct: 61 WFLQGDTNIGYLKEHNVSIWDEWADENGDLGPVYGKQWRSWAGPDGKSVDQLQEVLKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---------DNGKLSCQLYQRSGDVF 171 P SRR IVSAWN A + +M L PCH LFQFYV NGKLSCQLYQRS DVF Sbjct: 121 NSPDSRRIIVSAWNPAELPQMKLHPCHALFQFYVAPPDTGAGETNGKLSCQLYQRSADVF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A G+F+ T GD H+Y NH EQ + QLSR PR LPQMI Sbjct: 181 LGVPFNIASYALLTMMIARECDLDLGDFVWTGGDTHIYLNHLEQVETQLSREPRALPQMI 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +NP + ++L FRYEDF L +Y P I A V+V Sbjct: 241 LNPGVKNVLDFRYEDFELVNYNPWPGIKAPVAV 273 >gi|326330104|ref|ZP_08196416.1| thymidylate synthase [Nocardioidaceae bacterium Broad-1] gi|325952114|gb|EGD44142.1| thymidylate synthase [Nocardioidaceae bacterium Broad-1] Length = 264 Score = 354 bits (908), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL ++ G ++ DRTG GT S FG+Q R+DL++GFPLLTTKK+H +SV ELL Sbjct: 1 MQSYLDLLTRILDEGVEKSDRTGTGTISVFGHQTRYDLAEGFPLLTTKKIHTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L G++IWDEWAD++G+LGP+YG QWRSWP DG +DQI+ I+ ++ Sbjct: 61 WFLRGDTNVRWLQERGITIWDEWADENGDLGPVYGYQWRSWPTPDGRHVDQIARIIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRRHIV+AWN A ID MALPPCH L QFYV +GKLS QLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRHIVTAWNPADIDDMALPPCHTLCQFYVADGKLSLQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G Q GEF+HTLGD HLY+NH EQA LQL+R+PR LP + +NP++ D+ Sbjct: 181 YALLTHMVAHVTGLQPGEFVHTLGDAHLYSNHVEQARLQLTRTPRPLPTLRLNPDVKDID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D T+ Y+P I A V+V Sbjct: 241 AFDLDDITVEGYDPAPGIKAPVAV 264 >gi|152999765|ref|YP_001365446.1| thymidylate synthase [Shewanella baltica OS185] gi|160874384|ref|YP_001553700.1| thymidylate synthase [Shewanella baltica OS195] gi|166231731|sp|A6WKP4|TYSY_SHEB8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036943|sp|A9L5M3|TYSY_SHEB9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|151364383|gb|ABS07383.1| Thymidylate synthase [Shewanella baltica OS185] gi|160859906|gb|ABX48440.1| Thymidylate synthase [Shewanella baltica OS195] gi|315266619|gb|ADT93472.1| thymidylate synthase [Shewanella baltica OS678] Length = 264 Score = 354 bits (908), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL Sbjct: 1 MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV+YL + VSIWDEWAD +G+LGP+YG QWRSWP G+ IDQIS ++ ++ Sbjct: 61 WFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR P LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRRPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L +Y PH I A V+V Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264 >gi|254419110|ref|ZP_05032834.1| thymidylate synthase [Brevundimonas sp. BAL3] gi|196185287|gb|EDX80263.1| thymidylate synthase [Brevundimonas sp. BAL3] Length = 307 Score = 354 bits (908), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 166/262 (63%), Positives = 199/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LLR ++ G R DRTG GT FG QMRFDLSKGFP+LTTKK+H +S++ ELLWF Sbjct: 47 QYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPVLTTKKLHLRSIIVELLWF 106 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG++N+ +L +GV IWDEWAD +GELGP+YG QWRSW DG IDQI +V L+ + Sbjct: 107 LRGETNIGWLKDNGVRIWDEWADAEGELGPVYGKQWRSWTAPDGRSIDQIEKLVHGLKTN 166 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRRHIV+AWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 167 PNSRRHIVTAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 226 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT+MLA V+G + G+F+HT GD HLY NH EQA+LQL+R P LP M I P DL +F Sbjct: 227 LLTLMLAQVVGLEPGDFVHTFGDAHLYLNHLEQAELQLTREPLPLPVMHIAPK-TDLFAF 285 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 DFTL YE I A V+V Sbjct: 286 ELSDFTLEGYEAWPHIKAAVAV 307 >gi|46203405|ref|ZP_00208952.1| COG0207: Thymidylate synthase [Magnetospirillum magnetotacticum MS-1] Length = 290 Score = 354 bits (908), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 160/263 (60%), Positives = 200/263 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDL++GFPL+TTK++H +S++HELL Sbjct: 18 MRAYHDLLDRILTEGLRKDDRTGTGTLSVFGHQMRFDLAEGFPLVTTKQLHLRSIIHELL 77 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD DG LGP+YG QWRSW G +DQI+ ++ + Sbjct: 78 WFLQGDTNIAYLKENGVTIWDEWADADGNLGPVYGKQWRSWEKPSGGTVDQIAWVLGEIA 137 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 138 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 197 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G G+F+HTLGD HLY NH EQA LQLSR PR LP++ +NP + L Sbjct: 198 YALLTAMMAQVTGLAPGDFVHTLGDAHLYVNHLEQARLQLSREPRALPRLRLNPEVRSLF 257 Query: 241 SFRYEDFTLRSYEPHAAILAKVS 263 FR+ED + Y+PH AI A V Sbjct: 258 DFRFEDIAIEGYDPHPAIKAPVG 280 >gi|304382975|ref|ZP_07365456.1| thymidylate synthase [Prevotella marshii DSM 16973] gi|304335894|gb|EFM02143.1| thymidylate synthase [Prevotella marshii DSM 16973] Length = 282 Score = 353 bits (907), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G+ + DRTG GT S FG+QMRF + GFPLLTTK++H KS+++ELL Sbjct: 19 MKQYLDLLHLLLTEGTKKGDRTGTGTLSVFGHQMRFRMEDGFPLLTTKRLHLKSIIYELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGVSIWDEWAD +G+LGP+YG QWRSW G IDQI ++ LR Sbjct: 79 WFLKGDTNVRYLQEHGVSIWDEWADANGDLGPVYGHQWRSWAGPKGETIDQIQGVLNQLR 138 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D MALPPCHCLFQFYV G+LS QLYQRS D FLG+PFNIAS Sbjct: 139 QNPDSRRMIVSAWNPAEVDSMALPPCHCLFQFYVAEGRLSLQLYQRSADTFLGVPFNIAS 198 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL +M+A V G + G+F++T GD HLY NH EQA LQL+R+PR LP M +NP+I DL Sbjct: 199 YALLLLMMAQVTGLRAGDFVYTTGDTHLYLNHTEQARLQLTRTPRPLPTMKLNPDIADLF 258 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFRYEDF L +Y+P+ I A VSV Sbjct: 259 SFRYEDFQLSNYDPYDHIKADVSV 282 >gi|163786432|ref|ZP_02180880.1| Thymidylate synthase [Flavobacteriales bacterium ALC-1] gi|159878292|gb|EDP72348.1| Thymidylate synthase [Flavobacteriales bacterium ALC-1] Length = 274 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 159/277 (57%), Positives = 207/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV+ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLVKHVLAEGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N YL +GV IW+EWAD +G+LGP+YG QWR+W + IDQI ++ +L+ Sbjct: 61 WFLKGDTNTKYLTENGVRIWNEWADDNGDLGPVYGHQWRNWASEE---IDQIKEVITTLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L T M+A V GF+ G+FIHT GD H+YNNH EQ +LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALFTKMMAQVCGFEAGDFIHTFGDAHIYNNHMEQLELQLSRVPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+MI+NP + D+ F++EDFTL Y PH I V+V Sbjct: 238 PKMILNPEVKDIFDFKFEDFTLVDYNPHPHIKGVVAV 274 >gi|329848571|ref|ZP_08263599.1| thymidylate synthase [Asticcacaulis biprosthecum C19] gi|328843634|gb|EGF93203.1| thymidylate synthase [Asticcacaulis biprosthecum C19] Length = 288 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 160/263 (60%), Positives = 203/263 (77%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+LLR ++ G R DRTG GT FG Q+RFDLS+GFPLLTTKKVH+KSV ELLW Sbjct: 27 YQYLNLLRDCLENGVRRDDRTGTGTYGLFGRQIRFDLSQGFPLLTTKKVHFKSVAVELLW 86 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGD+NV YL HGV+IWDEWAD DG LGP+YG QWRSW DG VIDQ++ +V++L+ Sbjct: 87 FLRGDTNVKYLQDHGVTIWDEWADDDGNLGPVYGKQWRSWAAPDGRVIDQMAQLVENLKT 146 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRRH++SAWN A ++ MALPPCHCLFQF+V +G+LSCQLYQRS D+FLG+PFNIASY Sbjct: 147 NPNSRRHVISAWNPAEVEDMALPPCHCLFQFFVADGRLSCQLYQRSADIFLGVPFNIASY 206 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A +G + G+F+H+ GDVHLY+NH EQA Q+ R+P P + + P DL Sbjct: 207 ALLTHMVAQAVGLKPGDFVHSFGDVHLYSNHIEQAKTQMERTPFAFPVLELAPK-TDLFG 265 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 F Y D T+ +Y+ H A+ A V+V Sbjct: 266 FDYADLTIANYQSHGALKAPVAV 288 >gi|332883236|gb|EGK03519.1| thymidylate synthase [Dysgonomonas mossii DSM 22836] Length = 264 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+ V+ G+ + DRTG GT S FG+Q R++L++GFP+LTTKK+H KS+++ELL Sbjct: 1 MKQYHDLLKRVLAEGTFKEDRTGTGTISVFGHQSRYNLAEGFPVLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL HGV IW+EWAD++G+LG IYG QWRSWPDY+G +DQI++ V++++ Sbjct: 61 WFLAGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGYVDQITNAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA + M LPPCH FQFYV +GKLS QLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVADLPNMNLPPCHAFFQFYVADGKLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q GEF+HTLGD H+Y NH +Q LQL+R R LPQMIINP + + Sbjct: 181 YALLLKMMAQVTGLQEGEFVHTLGDAHIYTNHLDQVKLQLTRDFRPLPQMIINPEVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+PH I +V+V Sbjct: 241 DFKYEDFQLEGYDPHPHIKGEVAV 264 >gi|309389314|gb|ADO77194.1| thymidylate synthase [Halanaerobium praevalens DSM 2228] Length = 263 Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 204/264 (77%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL + +H++ G DR DRTG GTRS FGYQ+RF+L KGFPLLTTKK++WK++VHELL Sbjct: 1 MKKYLKMCQHILDNGVDREDRTGTGTRSVFGYQLRFNLKKGFPLLTTKKIYWKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ + V IWDEWAD+ G+LG IYG QWR+W DG IDQIS +++ ++ Sbjct: 61 WFLKGDTNIKYLNDNNVHIWDEWADEHGDLGHIYGHQWRNWEGKDG-TIDQISEVIEQIK 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWNV ++ MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS Sbjct: 120 TNPNSRRLLVNAWNVGDLENMALPPCHLLFQFYVADGKLSCQLYQRSCDTFLGVPFNIAS 179 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A V+G + G+FI + GDVH+Y+NHFEQ QL R PR L Q+ +NP I +L Sbjct: 180 YSLLTHMIAQVVGLEVGDFIWSGGDVHIYHNHFEQIKKQLKRKPRDLAQIKLNPKINNLF 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YED L +Y PH I KVSV Sbjct: 240 DFKYEDIKLLNYNPHPLIKGKVSV 263 >gi|313203340|ref|YP_004041997.1| thymidylate synthase [Paludibacter propionicigenes WB4] gi|312442656|gb|ADQ79012.1| thymidylate synthase [Paludibacter propionicigenes WB4] Length = 264 Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+DLL V+ G + DRTG GT S FG+QMRF++ GFP LTTKK+H KS++HELL Sbjct: 1 MKQYIDLLNRVLTEGVHKEDRTGTGTISVFGHQMRFNMEDGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IW+EWAD+ G LG IYG QWRSWPDY+G IDQI+ +V +++ Sbjct: 61 WFLNGDTNIKYLTDNGVRIWNEWADEQGNLGHIYGYQWRSWPDYNGGHIDQITEVVNAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRIIVSAWNVADIPNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQLSR PR LP M INP+I D+ Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHMEQVKLQLSREPRPLPTMKINPDIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF + DF L Y+PH I V+V Sbjct: 241 SFSFSDFELIDYDPHPHIKGVVAV 264 >gi|88858168|ref|ZP_01132810.1| thymidylate synthase [Pseudoalteromonas tunicata D2] gi|88819785|gb|EAR29598.1| thymidylate synthase [Pseudoalteromonas tunicata D2] Length = 277 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 161/277 (58%), Positives = 203/277 (73%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+RHV + G + DRTG GT S FGYQMRF+LS+GFPL+TTKK H KS++HELL Sbjct: 1 MKQYLELMRHVKEHGVKKEDRTGTGTISVFGYQMRFNLSEGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWD WA ++GELGP+YG QWRSW DG VIDQI+ +++ ++ Sbjct: 61 WFLAGDTNIKYLTDNGVKIWDGWATEEGELGPVYGAQWRSWQGLDGQVIDQIAELIKQIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN A++ K ALPPCH LFQFYV GKLSCQLYQRS Sbjct: 121 TNPDSRRLIVSAWNPAVLPDTQFSPSENAAMGKQALPPCHTLFQFYVLEGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ LG+PFNIASY+LLTMM+A V + G+F+HT GD HLY+NH EQ D QLSR+P Sbjct: 181 ADILLGVPFNIASYALLTMMIAQVCDLKVGDFVHTFGDAHLYSNHLEQVDEQLSRTPFPK 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP + D+ +F++EDF L +Y+ H I A V++ Sbjct: 241 PTMKINPAVKDIFAFKFEDFELENYQAHPHIKAPVAI 277 >gi|323137414|ref|ZP_08072492.1| thymidylate synthase [Methylocystis sp. ATCC 49242] gi|322397401|gb|EFX99924.1| thymidylate synthase [Methylocystis sp. ATCC 49242] Length = 268 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 159/268 (59%), Positives = 205/268 (76%), Gaps = 4/268 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL +++ G + DRTG GT S FG+QMRFDL++GFPL+TTK+VH KS++HELL Sbjct: 1 MRQYLDLLDKILREGVRKEDRTGTGTLSIFGHQMRFDLAQGFPLVTTKRVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL +GV+IWDEWAD+ G+LGP+YG QWR+WP G IDQIS +V+ ++ Sbjct: 61 WFLRGDTNIAYLRENGVTIWDEWADESGDLGPVYGRQWRAWPTPGGETIDQISWLVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPF 176 P+SRR IVSAWNVA ID+MAL PCHCLFQF+V +LSCQLYQRS DVFLG+PF Sbjct: 121 KSPFSRRLIVSAWNVAEIDRMALAPCHCLFQFHVAEIDGQKRLSCQLYQRSADVFLGVPF 180 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 N+ASY+LLT M+A V G G+F+H+ GD HLY NH EQA QL+R P+ LP++ +NP+I Sbjct: 181 NVASYALLTQMVAQVTGCVPGDFVHSFGDAHLYLNHLEQARTQLAREPKPLPRLRLNPSI 240 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L F+YED + YE A+ A ++V Sbjct: 241 TSLFDFKYEDIAIEGYESWPALAAPIAV 268 >gi|114570577|ref|YP_757257.1| thymidylate synthase [Maricaulis maris MCS10] gi|114341039|gb|ABI66319.1| thymidylate synthase [Maricaulis maris MCS10] Length = 285 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 160/263 (60%), Positives = 200/263 (76%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL LLR +++ G+++ DRTGVGT S FG Q+R DLSKGFPLLTTKKVH+KS+ ELLW Sbjct: 23 NAYLALLRDILENGAEQADRTGVGTMSVFGRQLRCDLSKGFPLLTTKKVHFKSIAIELLW 82 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRG++NV +L GV IWDEWAD++G+LGP+YG QWR W DG IDQ+S+I++ +R Sbjct: 83 FLRGETNVRWLQERGVKIWDEWADENGDLGPVYGKQWRRWEGPDGTEIDQLSNILEQIRN 142 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR IVS WN A + MALPPCH L+QF V GKLSCQLYQRS D+FLG+PFNIASY Sbjct: 143 NPASRRLIVSGWNPADVPNMALPPCHTLYQFNVAGGKLSCQLYQRSADMFLGVPFNIASY 202 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A V G + GE+IHT GD H+Y+NH +Q QLSR+PR LPQ+ +NP+ DL Sbjct: 203 ALLTAMVAQVCGLEPGEYIHTFGDAHIYSNHMDQVREQLSRAPRALPQLKLNPDATDLFG 262 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 F YED L Y+PH I A V+V Sbjct: 263 FEYEDIALEGYDPHPRITAPVAV 285 >gi|241759128|ref|ZP_04757237.1| thymidylate synthase [Neisseria flavescens SK114] gi|241320624|gb|EER56894.1| thymidylate synthase [Neisseria flavescens SK114] Length = 235 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 160/230 (69%), Positives = 191/230 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV+ G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL Sbjct: 1 MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 Y+LLTMM+A V G GEFIHT GD HLY+NH EQA LQLSR R+LP M Sbjct: 181 YALLTMMMAQVCGLGAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRSLPAM 230 >gi|307611741|emb|CBX01446.1| thymidylate synthase [Legionella pneumophila 130b] Length = 264 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL Sbjct: 1 MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAKGFPLVTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD +G+LGP+YG QWRSWP DG IDQ+S +VQ ++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGRTIDQLSDVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +D+MAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGELDQMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A EFI T GD HLY NH EQA QL+R P LP + I L Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQTQLTREPLPLPSLAIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +Y+ H AI A ++V Sbjct: 241 EYVYEDFEFVNYQSHPAIKAPIAV 264 >gi|332519885|ref|ZP_08396349.1| thymidylate synthase [Lacinutrix algicola 5H-3-7-4] gi|332044444|gb|EGI80638.1| thymidylate synthase [Lacinutrix algicola 5H-3-7-4] Length = 274 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 154/277 (55%), Positives = 211/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHELVKHVLENGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV IW+ WAD+ G+LGP+YG QWR+W + + +DQI+ ++++L+ Sbjct: 61 WFLKGDTNINYLTENGVKIWNSWADEKGDLGPVYGHQWRNW---NSDEVDQITEVIETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G+Q GEFIHT GD H+YNNH EQ +LQ++R R L Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCGYQAGEFIHTFGDAHIYNNHVEQLELQMTRDCRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP + D+ F++EDFTL Y PH I V+V Sbjct: 238 PKMKLNPEVKDIFEFKFEDFTLEDYNPHPHIKGAVAV 274 >gi|254784598|ref|YP_003072026.1| thymidylate synthase [Teredinibacter turnerae T7901] gi|259550813|sp|C5BMA3|TYSY_TERTT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|237686344|gb|ACR13608.1| thymidylate synthase [Teredinibacter turnerae T7901] Length = 277 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 162/277 (58%), Positives = 201/277 (72%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+RHV G + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL Sbjct: 1 MKQYLELMRHVRDNGVRKEDRTGTGTVSVFGYQMRFDLSQGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N++YL+ +GV IWD WA + G+LGPIYG QWRSWP +G +DQIS +++ ++ Sbjct: 61 WFLNGETNIAYLNNNGVKIWDAWATESGDLGPIYGAQWRSWPAQNGETLDQISQLIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR I+SAWN AL+ KMALPPCH LFQFYV G+LSCQLYQRS Sbjct: 121 HKPDSRRLIISAWNPALLPDESISPQDNVRNGKMALPPCHTLFQFYVLEGRLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G G+F+HT GD HLY NH EQ D QL R P L Sbjct: 181 ADIFLGVPFNIASYALLTMMIAQVTGLAPGDFVHTFGDAHLYLNHLEQVDTQLQRQPLPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP + D+ F ++DF L++Y+ H I A +SV Sbjct: 241 PTMAINPAVKDIFGFCFDDFELQNYQAHPHIAAPISV 277 >gi|196231360|ref|ZP_03130219.1| Thymidylate synthase [Chthoniobacter flavus Ellin428] gi|196224696|gb|EDY19207.1| Thymidylate synthase [Chthoniobacter flavus Ellin428] Length = 264 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V+ G + DRTG GT S FG Q RFDLS GFPLLTTKK+H KS++HELL Sbjct: 1 MRAYLDLLTLVLDHGRFKPDRTGTGTYSVFGAQARFDLSSGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL ++GV+IW+EWAD+DG LG +YG QWR W DG IDQI +++ ++ Sbjct: 61 WFLAGDTNVRYLQQNGVTIWNEWADEDGNLGRVYGAQWRDWITADGRHIDQIDNVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN +D MALPPCH +FQF+V +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPGEVDTMALPPCHAMFQFFVLDGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q G+F+HT GD+HLY NH +QA QL+R+PR LP M ++P I D+ Sbjct: 181 YALLTMMVAQVTGLQPGDFVHTFGDLHLYANHLDQAREQLTRTPRPLPTMTLSPAIRDIH 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH AI A ++V Sbjct: 241 GFRYEDFVLSGYDPHPAIKAPIAV 264 >gi|300692074|ref|YP_003753069.1| thymidylate synthetase [Ralstonia solanacearum PSI07] gi|299079134|emb|CBJ51802.1| thymidylate synthetase [Ralstonia solanacearum PSI07] Length = 264 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 1 MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHSKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 61 WFLQGATNVRWLQENGVTIWDEWADADGELGPIYGYQWRSWPTPTGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD HLYNNHFEQ + QL+R P LP++ I + Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLAREPLPLPKLHIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ HAAI A V+V Sbjct: 241 DYQYEDFEIVGYQSHAAIKAPVAV 264 >gi|15609901|ref|NP_217280.1| thymidylate synthase [Mycobacterium tuberculosis H37Rv] gi|31793939|ref|NP_856432.1| thymidylate synthase [Mycobacterium bovis AF2122/97] gi|121638643|ref|YP_978867.1| thymidylate synthase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662606|ref|YP_001284129.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra] gi|167968591|ref|ZP_02550868.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra] gi|215428196|ref|ZP_03426115.1| thymidylate synthase [Mycobacterium tuberculosis T92] gi|219558774|ref|ZP_03537850.1| thymidylate synthase [Mycobacterium tuberculosis T17] gi|224991135|ref|YP_002645824.1| thymidylate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|254232862|ref|ZP_04926189.1| thymidylate synthase thyA [Mycobacterium tuberculosis C] gi|254365415|ref|ZP_04981460.1| thymidylate synthase thyA [Mycobacterium tuberculosis str. Haarlem] gi|289444308|ref|ZP_06434052.1| thymidylate synthase [Mycobacterium tuberculosis T46] gi|289448420|ref|ZP_06438164.1| thymidylate synthase thyA [Mycobacterium tuberculosis CPHL_A] gi|289570943|ref|ZP_06451170.1| thymidylate synthase thyA [Mycobacterium tuberculosis T17] gi|289575461|ref|ZP_06455688.1| thymidylate synthase thyA [Mycobacterium tuberculosis K85] gi|289746567|ref|ZP_06505945.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987] gi|289751421|ref|ZP_06510799.1| thymidylate synthase thyA [Mycobacterium tuberculosis T92] gi|289754869|ref|ZP_06514247.1| thymidylate synthase [Mycobacterium tuberculosis EAS054] gi|289758891|ref|ZP_06518269.1| thymidylate synthase [Mycobacterium tuberculosis T85] gi|298526231|ref|ZP_07013640.1| thymidylate synthase thyA [Mycobacterium tuberculosis 94_M4241A] gi|308377122|ref|ZP_07441195.2| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu008] gi|308405964|ref|ZP_07494573.2| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu012] gi|54039796|sp|P67045|TYSY_MYCBO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54042282|sp|P67044|TYSY_MYCTU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231712|sp|A1KMA6|TYSY_MYCBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231716|sp|A5U6B7|TYSY_MYCTA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790245|sp|C1AFM7|TYSY_MYCBT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|2624286|emb|CAA15560.1| PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) [Mycobacterium tuberculosis H37Rv] gi|31619533|emb|CAD94971.1| PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) [Mycobacterium bovis AF2122/97] gi|121494291|emb|CAL72769.1| Probable thymidylate synthase thyA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601921|gb|EAY60931.1| thymidylate synthase thyA [Mycobacterium tuberculosis C] gi|134150928|gb|EBA42973.1| thymidylate synthase thyA [Mycobacterium tuberculosis str. Haarlem] gi|148506758|gb|ABQ74567.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra] gi|224774250|dbj|BAH27056.1| thymidylate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|289417227|gb|EFD14467.1| thymidylate synthase [Mycobacterium tuberculosis T46] gi|289421378|gb|EFD18579.1| thymidylate synthase thyA [Mycobacterium tuberculosis CPHL_A] gi|289539892|gb|EFD44470.1| thymidylate synthase thyA [Mycobacterium tuberculosis K85] gi|289544697|gb|EFD48345.1| thymidylate synthase thyA [Mycobacterium tuberculosis T17] gi|289687095|gb|EFD54583.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987] gi|289692008|gb|EFD59437.1| thymidylate synthase thyA [Mycobacterium tuberculosis T92] gi|289695456|gb|EFD62885.1| thymidylate synthase [Mycobacterium tuberculosis EAS054] gi|289714455|gb|EFD78467.1| thymidylate synthase [Mycobacterium tuberculosis T85] gi|298496025|gb|EFI31319.1| thymidylate synthase thyA [Mycobacterium tuberculosis 94_M4241A] gi|308348858|gb|EFP37709.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu008] gi|308364984|gb|EFP53835.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu012] gi|326904379|gb|EGE51312.1| thymidylate synthase thyA [Mycobacterium tuberculosis W-148] Length = 263 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 202/264 (76%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELL Sbjct: 1 MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSN+ +LH HGV+IWDEWA GELGPIYGVQWRSWP G IDQIS+ + LR Sbjct: 61 WFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV I++MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A+ G GEFI T GD H+Y+NH EQ LQLSR PR P++++ + + Sbjct: 181 YALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIF 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YED +++Y+PH AI A V+V Sbjct: 240 EYTYEDIVVKNYDPHPAIKAPVAV 263 >gi|227327704|ref|ZP_03831728.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 264 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YLH + VSIWDEWAD++G LGP+YG QWRSW DG IDQ+ +++ LR Sbjct: 61 WFLNGDTNVAYLHENKVSIWDEWADENGNLGPVYGKQWRSWGAADGREIDQLKNVLTQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ +LQLSR PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTNLQLSREPRALPKLVIKRRPDTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|256823628|ref|YP_003147591.1| thymidylate synthase [Kangiella koreensis DSM 16069] gi|256797167|gb|ACV27823.1| thymidylate synthase [Kangiella koreensis DSM 16069] Length = 264 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++RHVI G D+ DRTG GTRS FGYQMRF+L GFPL+TTKK+H +S+++ELL Sbjct: 1 MKQYLDMMRHVINNGEDKGDRTGTGTRSVFGYQMRFNLQDGFPLVTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWD+WAD++G+LGP+YG QWRSW DG IDQISS++ ++ Sbjct: 61 WFLNGDTNIKYLKDNGVSIWDDWADENGDLGPVYGEQWRSWKKPDGTTIDQISSVLNQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V A+N + D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRLMVVAYNPGVADEMALPPCHSLFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + GEFI T GD HLY+NHFEQA+ QLSR P +LP + I L Sbjct: 181 YALLTHMIAQQAGLEVGEFIWTGGDTHLYSNHFEQANEQLSREPLSLPALKIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + YE H I A V+V Sbjct: 241 DYQFEDFEIVGYESHPHIKAPVAV 264 >gi|319953673|ref|YP_004164940.1| thymidylate synthase [Cellulophaga algicola DSM 14237] gi|319422333|gb|ADV49442.1| thymidylate synthase [Cellulophaga algicola DSM 14237] Length = 274 Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 155/277 (55%), Positives = 209/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+HV++ G+ + DRTG GT+S FGYQMRFDLSKGFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLLQHVLETGNQKGDRTGTGTKSVFGYQMRFDLSKGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW++WAD++G+LGP+YG QWR+W + IDQI V++L+ Sbjct: 61 WFLKGDTNIDYLKENGVRIWNDWADENGDLGPVYGHQWRNW---NSEEIDQIKDAVETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR ++SAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMLISAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A G++ G+FIHT GD H+YNNH +Q +LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQACGYEAGDFIHTFGDAHIYNNHMDQVELQLSRDPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M++NP + ++ F++EDFTL Y PH I V++ Sbjct: 238 PKMVLNPEVKNIFDFKFEDFTLVDYNPHPHIKGVVAI 274 >gi|262341260|ref|YP_003284115.1| thymidylate synthase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272597|gb|ACY40505.1| thymidylate synthase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 264 Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 151/264 (57%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL++V+K G R+DRTG+GT S FG+QMRF+L KGFPLLTTKK++ +S+++ELL Sbjct: 1 MKQYLNLLKNVLKNGIKRKDRTGIGTISIFGHQMRFNLEKGFPLLTTKKLNIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL H VSIW+EWAD++GELGPIYG+QWR WP Y+G+ IDQI+++++ ++ Sbjct: 61 WFLKGDTNIQYLKDHQVSIWNEWADQNGELGPIYGLQWRKWPTYNGHFIDQIANLIEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVS+WNV +I MALPPCH LFQFYV KLS LYQRS D+F+G+PFNIAS Sbjct: 121 FNPNSRRLIVSSWNVGMIQNMALPPCHLLFQFYVSEKKLSLLLYQRSADIFIGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MLA ++ + E IH +GD H+YNNH +Q LQ+ RSPR LP++I+NP++ ++ Sbjct: 181 YALLLTMLAKILNLKEKELIHIIGDAHIYNNHIQQVKLQMKRSPRPLPKIILNPSVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L++Y P I V++ Sbjct: 241 EFCFDDFQLKNYNPFPHIKGDVAI 264 >gi|332826869|gb|EGJ99669.1| thymidylate synthase [Dysgonomonas gadei ATCC BAA-286] Length = 264 Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 157/264 (59%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+ V+ G+ + DRTG GT S FG+Q R++L+ GFP+LTTKK+H KS+++ELL Sbjct: 1 MKQYHDLLKRVLAEGTHKSDRTGTGTISVFGHQSRYNLADGFPVLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL HGV IW+EWAD++G+LG IYG QWRSWPDY+G IDQIS++V +++ Sbjct: 61 WFLAGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISNVVDTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA + M LPPCH FQFYV +GKLS QLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVADLPNMNLPPCHAFFQFYVADGKLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ +LQL+R R LP+MIINP + + Sbjct: 181 YALLLQMMAQVTGLEAGDFVHTLGDAHIYTNHLEQVNLQLTRDFRPLPRMIINPEVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF+L Y+PH I +V++ Sbjct: 241 DFKFEDFSLEGYDPHPHIKGEVAI 264 >gi|118467946|ref|YP_887007.1| thymidylate synthase [Mycobacterium smegmatis str. MC2 155] gi|166231713|sp|A0QVR9|TYSY_MYCS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|118169233|gb|ABK70129.1| thymidylate synthase [Mycobacterium smegmatis str. MC2 155] Length = 266 Score = 351 bits (901), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 166/261 (63%), Positives = 202/261 (77%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V + G+ + DRTG GTRS FG+QMR+DLS GFPL+TTKKVH KSV++ELLWFL Sbjct: 7 YEDLLRLVTERGTPKSDRTGTGTRSLFGHQMRYDLSAGFPLITTKKVHTKSVIYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L HGV+IWDEWA + G+LGPIYGVQWRSWP G IDQISS ++ L++DP Sbjct: 67 RGDSNVRWLQEHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISSALELLKSDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ LQLSR PR P++++ P + + Sbjct: 187 LTHMMAAQAGLDVGEFIWTGGDCHIYDNHTEQVALQLSREPRPYPELVLAPRD-SIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + +Y+PH AI A V+V Sbjct: 246 YEDIAIVNYDPHPAIKAPVAV 266 >gi|227115444|ref|ZP_03829100.1| thymidylate synthase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 264 Score = 351 bits (901), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YLH + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ LR Sbjct: 61 WFLNGDTNVVYLHENKVSIWDEWADENGDLGPVYGKQWRSWGAADGREIDQLKNVLTQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ +LQLSR PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTNLQLSREPRALPKLVIKRRPDTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|71898344|ref|ZP_00680517.1| Thymidylate synthase [Xylella fastidiosa Ann-1] gi|71731867|gb|EAO33925.1| Thymidylate synthase [Xylella fastidiosa Ann-1] Length = 264 Score = 351 bits (901), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N++YL +H V IWDEWAD GELGP+YG QWR W DG+ IDQI +V+ ++ Sbjct: 61 WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA V G G+F+HTLGD HLY NH EQA +QL R PR P + +N + DL Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y+D + Y+P+ AI A V+V Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264 >gi|28199248|ref|NP_779562.1| thymidylate synthase [Xylella fastidiosa Temecula1] gi|182681974|ref|YP_001830134.1| thymidylate synthase [Xylella fastidiosa M23] gi|32130273|sp|Q87BT4|TYSY_XYLFT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|28057354|gb|AAO29211.1| thymidylate synthase [Xylella fastidiosa Temecula1] gi|182632084|gb|ACB92860.1| Thymidylate synthase [Xylella fastidiosa M23] gi|307578239|gb|ADN62208.1| thymidylate synthase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 264 Score = 351 bits (900), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLELLNDVLVHGIKKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N++YL +H V IWDEWAD GELGP+YG QWR W DG+ IDQI +V+ ++ Sbjct: 61 WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA V G G+F+HTLGD HLY NH EQA +QL R PR P + +N + DL Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y+D + Y+P+ AI A V+V Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264 >gi|298209224|ref|YP_003717403.1| thymidylate synthase [Croceibacter atlanticus HTCC2559] gi|83849151|gb|EAP87020.1| thymidylate synthase [Croceibacter atlanticus HTCC2559] Length = 274 Score = 351 bits (900), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 159/277 (57%), Positives = 208/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+RHV+K G + DRTG GT+S FGYQMRF+LS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLMRHVLKAGVQKGDRTGTGTKSVFGYQMRFNLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IW+EWAD++G+LGP+YG QWR+W + IDQI I+ +L+ Sbjct: 61 WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGHQWRNW---NSEEIDQIKDIIDTLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV GKLSCQLYQRS Sbjct: 118 NNPNSRRMLVSAWNPSVMPNTSESFSENVAKGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+YNNHFEQ +LQLSR R L Sbjct: 178 ADIFLGVPFNIASYALLTMMIAQVCGYEAGDFIHTFGDAHIYNNHFEQVELQLSRECRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M IN ++ D+ F+++DFTL +Y PH I V++ Sbjct: 238 PKMQINKDVKDIFGFKFDDFTLINYNPHPHIKGAVAI 274 >gi|149926867|ref|ZP_01915126.1| thymidylate synthase [Limnobacter sp. MED105] gi|149824419|gb|EDM83637.1| thymidylate synthase [Limnobacter sp. MED105] Length = 264 Score = 351 bits (900), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+D+ DRTG GTRS FGYQMRF+L GFP++TTKK+H +S++HELL Sbjct: 1 MQQYLDLMQHVLDHGTDKMDRTGTGTRSVFGYQMRFNLQDGFPMVTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GDSN+ YL +GVSIWDEWAD++G LGP+YGVQWRSWP DG IDQIS ++Q ++ Sbjct: 61 WFLMGDSNIRYLKENGVSIWDEWADENGNLGPVYGVQWRSWPTADGRHIDQISQLMQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA I+ M LPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVADINNMKLPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G+F+ T GD HLY+NH EQ QLSR P LP + I + Sbjct: 181 YALLTHMVAQQCDLDVGDFVWTGGDCHLYSNHMEQVAEQLSRKPHPLPTLQIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + +Y H I A V+V Sbjct: 241 DYKFEDFEILNYTCHPHIKAPVAV 264 >gi|71276155|ref|ZP_00652435.1| Thymidylate synthase [Xylella fastidiosa Dixon] gi|71900364|ref|ZP_00682498.1| Thymidylate synthase [Xylella fastidiosa Ann-1] gi|170730616|ref|YP_001776049.1| thymidylate synthase [Xylella fastidiosa M12] gi|71163073|gb|EAO12795.1| Thymidylate synthase [Xylella fastidiosa Dixon] gi|71729867|gb|EAO31964.1| Thymidylate synthase [Xylella fastidiosa Ann-1] gi|167965409|gb|ACA12419.1| Thymidylate synthase [Xylella fastidiosa M12] Length = 264 Score = 351 bits (900), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N++YL +H V IWDEWAD GELGP+YG QWR W DG+ IDQI +V+ ++ Sbjct: 61 WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA V G G+F+HTLGD HLY NH EQA +QL R PR P + +N + DL Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y+D + Y+P+ AI A V+V Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264 >gi|15842302|ref|NP_337339.1| thymidylate synthase [Mycobacterium tuberculosis CDC1551] gi|215404733|ref|ZP_03416914.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987] gi|215412578|ref|ZP_03421306.1| thymidylate synthase [Mycobacterium tuberculosis 94_M4241A] gi|215431705|ref|ZP_03429624.1| thymidylate synthase [Mycobacterium tuberculosis EAS054] gi|215447016|ref|ZP_03433768.1| thymidylate synthase [Mycobacterium tuberculosis T85] gi|260187781|ref|ZP_05765255.1| thymidylate synthase [Mycobacterium tuberculosis CPHL_A] gi|260201893|ref|ZP_05769384.1| thymidylate synthase [Mycobacterium tuberculosis T46] gi|260206075|ref|ZP_05773566.1| thymidylate synthase [Mycobacterium tuberculosis K85] gi|294994142|ref|ZP_06799833.1| thymidylate synthase [Mycobacterium tuberculosis 210] gi|306777045|ref|ZP_07415382.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu001] gi|306780947|ref|ZP_07419284.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu002] gi|306785575|ref|ZP_07423897.1| thymidylate synthase [Mycobacterium tuberculosis SUMu003] gi|306790170|ref|ZP_07428492.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu004] gi|306798672|ref|ZP_07436974.1| thymidylate synthase [Mycobacterium tuberculosis SUMu006] gi|306807432|ref|ZP_07444100.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu007] gi|306968827|ref|ZP_07481488.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu009] gi|306973160|ref|ZP_07485821.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu010] gi|307080869|ref|ZP_07490039.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu011] gi|13882597|gb|AAK47153.1| thymidylate synthase [Mycobacterium tuberculosis CDC1551] gi|308214556|gb|EFO73955.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu001] gi|308326203|gb|EFP15054.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu002] gi|308329758|gb|EFP18609.1| thymidylate synthase [Mycobacterium tuberculosis SUMu003] gi|308333365|gb|EFP22216.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu004] gi|308341052|gb|EFP29903.1| thymidylate synthase [Mycobacterium tuberculosis SUMu006] gi|308346162|gb|EFP35013.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu007] gi|308353578|gb|EFP42429.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu009] gi|308357422|gb|EFP46273.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu010] gi|308361374|gb|EFP50225.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu011] gi|323718611|gb|EGB27775.1| thymidylate synthase thyA [Mycobacterium tuberculosis CDC1551A] Length = 266 Score = 351 bits (900), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 166/261 (63%), Positives = 201/261 (77%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELLWFL Sbjct: 7 YEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSN+ +LH HGV+IWDEWA GELGPIYGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I++MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ LQLSR PR P++++ + + + Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIFEYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++Y+PH AI A V+V Sbjct: 246 YEDIVVKNYDPHPAIKAPVAV 266 >gi|256824789|ref|YP_003148749.1| thymidylate synthase [Kytococcus sedentarius DSM 20547] gi|256688182|gb|ACV05984.1| thymidylate synthase [Kytococcus sedentarius DSM 20547] Length = 264 Score = 351 bits (900), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L V++ G+ DRTG GT S FG Q R+DL+ GFPL+TTKKV+ + VV ELL Sbjct: 1 MRQYLDWLTDVLENGTPTEDRTGTGTLSVFGRQTRYDLAAGFPLVTTKKVYRRGVVGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L + IWDEWAD++G+LGP+YG QWRSWP DG +DQI+ +V+SLR Sbjct: 61 WFLRGDTNVRWLQERKIHIWDEWADENGDLGPVYGAQWRSWPRPDGGTVDQIAKVVESLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A P SRRHIVSAWN A +D MALPPCH LFQF+V G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 AHPASRRHIVSAWNPAEVDDMALPPCHALFQFHVSGGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + GEF+HT+GD+HLY+NH EQA QL+R PR LP++ +NP + +L Sbjct: 181 YALLTHMVAHVTDLEVGEFVHTVGDLHLYSNHLEQAREQLAREPRPLPRLELNPAVRELD 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D T Y+PH AI A ++V Sbjct: 241 AFDLDDVTFHGYDPHPAISAPIAV 264 >gi|17545666|ref|NP_519068.1| thymidylate synthase [Ralstonia solanacearum GMI1000] gi|22096223|sp|Q8Y0U6|TYSY_RALSO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|17427959|emb|CAD14649.1| probable thymidylate synthase (ts) (tsase) protein [Ralstonia solanacearum GMI1000] Length = 264 Score = 351 bits (900), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 1 MQPYLDLMRHVHEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD +GELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 61 WFLQGATNVRWLRENGVTIWDEWADAEGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD HLYNNHFEQ + QL+R+P LP++ I + Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF + YE H AI A V+V Sbjct: 241 DYRYEDFEIVGYESHPAIKAPVAV 264 >gi|149371858|ref|ZP_01891177.1| thymidylate synthetase [unidentified eubacterium SCB49] gi|149354998|gb|EDM43559.1| thymidylate synthetase [unidentified eubacterium SCB49] Length = 274 Score = 350 bits (899), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 159/277 (57%), Positives = 209/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+HV+K G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKKVH KS+++ELL Sbjct: 1 MKQYHDLLKHVLKEGTLKADRTGTGTKSVFGYQMRFDLSEGFPMVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD++G LGP+YG QWR+W + IDQI+ I+++L+ Sbjct: 61 WFLKGDTNIEYLKENGVRIWNEWADENGNLGPVYGHQWRNW---NSEGIDQIADIIETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPDSRRMMVSAWNPSVMPDTSKPFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR R L Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQIELQLSRDIRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP+I D+ F ++ FTL Y PH I V++ Sbjct: 238 PKMTLNPDIKDIFGFTFDSFTLTDYNPHPHIKGAVAI 274 >gi|170750914|ref|YP_001757174.1| thymidylate synthase [Methylobacterium radiotolerans JCM 2831] gi|170657436|gb|ACB26491.1| Thymidylate synthase [Methylobacterium radiotolerans JCM 2831] Length = 264 Score = 350 bits (899), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLR ++ G + DRTG GT S FG+QMRFDLS GFPL+TTK++H +S++HELL Sbjct: 1 MDAYHDLLRRILDEGVAKDDRTGTGTLSVFGHQMRFDLSAGFPLVTTKRLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+ L +GV+IWDEWAD +G+LGP+YG QWRSW G +DQI+ ++ +R Sbjct: 61 WFLAGDTNVAALRANGVTIWDEWADANGDLGPVYGRQWRSWERPGGGTVDQIAWVLDEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVSEGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G G F+HT GD HLY NH EQ L RSPR LPQ+ +NP + DL Sbjct: 181 YALLTHMIAQVTGLGVGAFVHTFGDAHLYRNHLEQTRTLLGRSPRPLPQLRLNPEVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + +Y+PH AI A V+V Sbjct: 241 AFRFEDIAIENYDPHPAIAAPVAV 264 >gi|148823952|ref|YP_001288706.1| thymidylate synthase [Mycobacterium tuberculosis F11] gi|254551823|ref|ZP_05142270.1| thymidylate synthase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289553451|ref|ZP_06442661.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 605] gi|289762936|ref|ZP_06522314.1| thymidylate synthase thyA [Mycobacterium tuberculosis GM 1503] gi|297635373|ref|ZP_06953153.1| thymidylate synthase [Mycobacterium tuberculosis KZN 4207] gi|148722479|gb|ABR07104.1| thymidylate synthase thyA [Mycobacterium tuberculosis F11] gi|289438083|gb|EFD20576.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 605] gi|289710442|gb|EFD74458.1| thymidylate synthase thyA [Mycobacterium tuberculosis GM 1503] gi|328457927|gb|AEB03350.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 4207] Length = 263 Score = 350 bits (899), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 166/264 (62%), Positives = 201/264 (76%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELL Sbjct: 1 MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSN+ +LH HGV+IWDEWA GELGPIYGVQWRSWP G IDQIS+ + LR Sbjct: 61 WFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV I++MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A+ G GEFI GD H+Y+NH EQ LQLSR PR P++++ + + Sbjct: 181 YALLTHMMAAQAGLSVGEFIWAGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIF 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YED +++Y+PH AI A V+V Sbjct: 240 EYTYEDIVVKNYDPHPAIKAPVAV 263 >gi|238896342|ref|YP_002921078.1| thymidylate synthase [Klebsiella pneumoniae NTUH-K2044] gi|262039838|ref|ZP_06013112.1| thymidylate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330009185|ref|ZP_08306468.1| thymidylate synthase [Klebsiella sp. MS 92-3] gi|238548660|dbj|BAH65011.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259042807|gb|EEW43804.1| thymidylate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534871|gb|EGF61409.1| thymidylate synthase [Klebsiella sp. MS 92-3] Length = 264 Score = 350 bits (899), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 157/264 (59%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP DG IDQIS+++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQISTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I + Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|325954868|ref|YP_004238528.1| Thymidylate synthase [Weeksella virosa DSM 16922] gi|323437486|gb|ADX67950.1| Thymidylate synthase [Weeksella virosa DSM 16922] Length = 264 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL + V++ G+ + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH KS+++ELL Sbjct: 1 MKQYLDLCKKVMQEGTLKEDRTGTGTKSIFGYQMRFDLNEGFPLVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+SYL +GV IW+EWAD++GELGP+YG QWRSW +G IDQI ++ ++ Sbjct: 61 WFLKGETNISYLTENGVRIWNEWADENGELGPVYGKQWRSWAKPNGETIDQIKEVIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MAL PCH FQFYV + KLS QLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVGELDEMALAPCHAFFQFYVADDKLSLQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V + G+F+HT GD H+Y NHF+Q +LQLSR P LP+M INP++ D+ Sbjct: 181 YALLQMMVAQVCNLELGDFVHTFGDAHIYKNHFDQIELQLSRDPFPLPKMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++ DF L Y+ H I V+V Sbjct: 241 DFQFSDFELIDYQSHPHIKGIVAV 264 >gi|253687303|ref|YP_003016493.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259550794|sp|C6DAE9|TYSY_PECCP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|251753881|gb|ACT11957.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 264 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ LR Sbjct: 61 WFLNGDTNVAYLHENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTQLQLSREPRALPKLVIKRRPDTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPTIKAPVAI 264 >gi|284037715|ref|YP_003387645.1| thymidylate synthase [Spirosoma linguale DSM 74] gi|283817008|gb|ADB38846.1| thymidylate synthase [Spirosoma linguale DSM 74] Length = 264 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLRH++ G+ + DRTG GT S FGYQMRF+L +GFPLLTTKKVH KS++HELL Sbjct: 1 MQQYHDLLRHILANGTRKTDRTGTGTISVFGYQMRFNLQEGFPLLTTKKVHTKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSW G VIDQ+ +++ L+ Sbjct: 61 WFIKGDTNIKYLKDNGVSIWDEWADENGDLGPVYGKQWRSWAGPQGQVIDQLQDVLRQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR I+SAWN A + MALPPCH L QFYV + KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NTPDSRRIIISAWNPADVPSMALPPCHLLMQFYVADNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G + EFI T GD HLY NH EQ + QL+R R LP M +NP++ + Sbjct: 181 YALLTMMIAQECGLEAHEFIWTGGDTHLYLNHLEQVETQLARDFRPLPTMRLNPDVRSVF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y DFTL +Y PH AI A V+V Sbjct: 241 DFTYADFTLENYNPHPAIKAPVAV 264 >gi|229915874|ref|YP_002884520.1| thymidylate synthase [Exiguobacterium sp. AT1b] gi|259550780|sp|C4L1C9|TYSY_EXISA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|229467303|gb|ACQ69075.1| thymidylate synthase [Exiguobacterium sp. AT1b] Length = 264 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RH++ G + DRTG GT S FGYQMRF+L +GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYHDLCRHILDQGVVKEDRTGTGTTSVFGYQMRFNLQEGFPLITTKKLHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ G++NV YL +GV IW+EWAD++G LGP+YG QWRS+P DG+ +DQ++ +++ ++ Sbjct: 61 WFISGETNVRYLQDNGVRIWNEWADEEGNLGPVYGSQWRSFPRPDGSSVDQLAQVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN +++MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNPGQLEEMALPPCHLLFQFYVADGKLSCQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HTLGD H+Y+NH EQ +LQLSR PR LP++ I ++ + Sbjct: 181 YALLTHMVAHVTGLEVGDFVHTLGDAHIYHNHLEQVELQLSRDPRPLPKLNIVRDVSSIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFR+EDF + Y+PH I +VSV Sbjct: 241 SFRFEDFEILGYDPHPHIKGEVSV 264 >gi|167647347|ref|YP_001685010.1| thymidylate synthase [Caulobacter sp. K31] gi|167349777|gb|ABZ72512.1| Thymidylate synthase [Caulobacter sp. K31] Length = 283 Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 158/262 (60%), Positives = 201/262 (76%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LL +++ G +R DRTG GT+ FG Q+RFDLS+GFP+LTTKK+H +S++ ELLWF Sbjct: 23 QYLNLLADILENGVERGDRTGTGTKGVFGRQIRFDLSQGFPVLTTKKLHLRSIIVELLWF 82 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD+NV YL +G IWDEWAD++G+LGP+YG QWRSW +G IDQI ++++ L+ + Sbjct: 83 LRGDTNVKYLQDNGCKIWDEWADENGDLGPVYGKQWRSWATPNGQSIDQIQNLIEGLKTN 142 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRRHIVSAWN A ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 143 PNSRRHIVSAWNPADVEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 202 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT+M+A V+G + GEF+HT GD HLY NH +QA QL R P+ P + + N DL +F Sbjct: 203 LLTLMVAQVVGLKPGEFVHTFGDAHLYMNHLDQAREQLQREPKPFPTLKM-ANKRDLFAF 261 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 Y DF L YE H I A V+V Sbjct: 262 EYADFQLEGYEAHPHIKAAVAV 283 >gi|152971755|ref|YP_001336864.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166231708|sp|A6TDG3|TYSY_KLEP7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|150956604|gb|ABR78634.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 264 Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 156/264 (59%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I + Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|94311504|ref|YP_584714.1| thymidylate synthase [Cupriavidus metallidurans CH34] gi|122987875|sp|Q1LK81|TYSY_RALME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|93355356|gb|ABF09445.1| thymidylate synthetase [Cupriavidus metallidurans CH34] Length = 264 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDL++GFP++TTKK+H KS++HELL Sbjct: 1 MKQYLDFMRHVYEHGTEKSDRTGTGTRSVFGYQMRFDLNEGFPVVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N+ YL +GV+IWDEWAD +GELGPIYG QWR+WP DG IDQI+ +VQ +R Sbjct: 61 WFLQGSTNIKYLKDNGVTIWDEWADANGELGPIYGYQWRAWPTPDGRHIDQITEVVQQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 DNPDSRRLIVSAWNVGEIPQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G+F+ T GD H+Y+NHFEQ + QLSR P LP + I + Sbjct: 181 YALLTHMIAQQCDLGVGDFVWTGGDCHIYSNHFEQVETQLSREPMKLPTLRIKHRPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++Y+DF L YE H AI A V+V Sbjct: 241 DYKYDDFELVGYESHPAIKAPVAV 264 >gi|261749228|ref|YP_003256913.1| thymidylate synthase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497320|gb|ACX83770.1| thymidylate synthase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 279 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 153/265 (57%), Positives = 209/265 (78%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL++V+K G + DRTG+GT+S FG QMRF+L KGFPLLTTKK+ +S+++ELL Sbjct: 15 MEQYLDLLKNVLKNGIKKMDRTGIGTKSLFGSQMRFNLKKGFPLLTTKKLSIRSIIYELL 74 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N+ YL + VSIW+EWA+++G+LGPIYG+QWR WP YDG+ IDQI+++++ ++ Sbjct: 75 WFLKGYTNIQYLKENKVSIWNEWANENGDLGPIYGLQWRKWPAYDGHFIDQITNLIKEIK 134 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSCQLYQRSGDVFLGIPFNIA 179 ++P+SRR IVS+WNV +I +M LPPCH LFQFYV K LS QLYQRS D+FLG+PFNIA Sbjct: 135 SNPHSRRLIVSSWNVGMIQEMRLPPCHLLFQFYVSEKKQLSLQLYQRSADIFLGLPFNIA 194 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LL M+A + F EFIHT+GD H+YNNH EQ LQ+ R P+ LP++++NP++ ++ Sbjct: 195 SYALLLTMVAKTLNFIAKEFIHTIGDAHIYNNHIEQVKLQIQRPPKPLPKILLNPSVKNV 254 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 L F +EDF L +Y PH I V+V Sbjct: 255 LDFSFEDFKLINYNPHPHIKGDVAV 279 >gi|332994533|gb|AEF04588.1| thymidylate synthase [Alteromonas sp. SN2] Length = 277 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 162/277 (58%), Positives = 204/277 (73%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL L+RHV G + DRTG GT S FGYQMRFDL +GFPL+TTKK H KS++HELL Sbjct: 1 MKEYLALMRHVRDTGVKKEDRTGTGTLSVFGYQMRFDLQQGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G+SN++YL +GVSIWD WA ++GELGP+YG QWRSW + DG IDQI+ +++ ++ Sbjct: 61 WFLKGESNIAYLKENGVSIWDGWATEEGELGPVYGKQWRSWDNGDGTTIDQIADVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH +FQFYV +GKLSCQLYQRS Sbjct: 121 TNPDSRRLIVSAWNPSVLPDTQYSPRENASMGKQALPPCHTMFQFYVLDGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GD+FLGIPFNIASY+LLTMM+A V + G+FI TLGD HLY+NH EQ DLQLSR P Sbjct: 181 GDIFLGIPFNIASYALLTMMIAQVCDLEPGDFILTLGDAHLYSNHLEQVDLQLSREPFAP 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +N ++ D+ F +EDFTL+ Y H I A V++ Sbjct: 241 PVMELNKSVKDIFDFSFEDFTLKGYHSHPHIKAPVAI 277 >gi|218754505|ref|ZP_03533301.1| thymidylate synthase [Mycobacterium tuberculosis GM 1503] gi|253798154|ref|YP_003031155.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 1435] gi|297732371|ref|ZP_06961489.1| thymidylate synthase [Mycobacterium tuberculosis KZN R506] gi|313659703|ref|ZP_07816583.1| thymidylate synthase [Mycobacterium tuberculosis KZN V2475] gi|253319657|gb|ACT24260.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 1435] Length = 266 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 165/261 (63%), Positives = 200/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELLWFL Sbjct: 7 YEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSN+ +LH HGV+IWDEWA GELGPIYGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I++MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI GD H+Y+NH EQ LQLSR PR P++++ + + + Sbjct: 187 LTHMMAAQAGLSVGEFIWAGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIFEYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++Y+PH AI A V+V Sbjct: 246 YEDIVVKNYDPHPAIKAPVAV 266 >gi|299066921|emb|CBJ38116.1| thymidylate synthetase [Ralstonia solanacearum CMR15] Length = 264 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 1 MQPYLDLMRHVHEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD +GELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 61 WFLQGATNVRWLRENGVTIWDEWADAEGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD HLYNNHFEQ + QL+R+P LP++ I + Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF + YE H AI A V+V Sbjct: 241 DYRYEDFEIVGYESHPAIKAPVAV 264 >gi|300704706|ref|YP_003746309.1| thymidylate synthetase [Ralstonia solanacearum CFBP2957] gi|299072370|emb|CBJ43708.1| thymidylate synthetase [Ralstonia solanacearum CFBP2957] Length = 264 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 1 MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQRGFPLVTTKKVHIKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 61 WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD HLYNNHFEQ + QL+R+P LP++ I + Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARAPLPLPKLHIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+ HAAI A V+V Sbjct: 241 DYQFEDFEIVGYQSHAAIKAPVAV 264 >gi|261822635|ref|YP_003260741.1| thymidylate synthase [Pectobacterium wasabiae WPP163] gi|261606648|gb|ACX89134.1| thymidylate synthase [Pectobacterium wasabiae WPP163] Length = 264 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V++ G+ + DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMNKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL+ + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ LR Sbjct: 61 WFLNGDTNVAYLNENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYNNHMEQTHLQLSREPRALPKLVIKRRPDTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|91215934|ref|ZP_01252903.1| thymidylate synthase [Psychroflexus torquis ATCC 700755] gi|91185911|gb|EAS72285.1| thymidylate synthase [Psychroflexus torquis ATCC 700755] Length = 274 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 157/277 (56%), Positives = 205/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+ H++ G + DRTG GT+S FGYQMRFDL++GFPL+T+KK+H KS+++ELL Sbjct: 1 MKQYHDLISHILNNGIQKGDRTGTGTKSVFGYQMRFDLNEGFPLVTSKKIHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+SYL +GV IW+EWA++DG+LGP+YG QWR+W D IDQI ++ +L+ Sbjct: 61 WFLKGDTNISYLKENGVKIWNEWANEDGDLGPVYGHQWRNWNSED---IDQIKELIHTLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV GKLSCQLYQRS Sbjct: 118 TNPNSRRMMVSAWNPSVMPDTSASFDDNIANGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+L TMM+A V G + G+FIHT GD H+YNNH EQ DLQLSR+ L Sbjct: 178 ADVFLGVPFNIASYALFTMMVAQVCGLKLGDFIHTFGDAHIYNNHLEQVDLQLSRTEIPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + + F++EDFTL +Y+PH I KV++ Sbjct: 238 PTMKLNPEVNSIFDFKFEDFTLENYDPHPHIKGKVAI 274 >gi|312129644|ref|YP_003996984.1| thymidylate synthase [Leadbetterella byssophila DSM 17132] gi|311906190|gb|ADQ16631.1| thymidylate synthase [Leadbetterella byssophila DSM 17132] Length = 260 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 157/264 (59%), Positives = 205/264 (77%), Gaps = 4/264 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLRH++K G+ + DRTG GT S FGYQMRFDLSKGFPL+TTKK+H KS++HELL Sbjct: 1 MQQYQDLLRHILKEGTQKTDRTGTGTLSVFGYQMRFDLSKGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ GD+N+ YL +GVSIWDEWA+++G+LGP+YG QWR+W D IDQ+ ++ +++ Sbjct: 61 WFINGDTNIKYLKDNGVSIWDEWANENGDLGPVYGKQWRAWNDE----IDQLKEVINTIK 116 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV+ + +MAL PCH LFQFYV + KLSCQLYQRS DVFLG+PFNIAS Sbjct: 117 HNPDSRRMIVSAWNVSDLPRMALMPCHALFQFYVADNKLSCQLYQRSADVFLGVPFNIAS 176 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G + G+F+ T GD HLY NH EQ + QL R+P+ LP M +NP++ + Sbjct: 177 YALLTMMIAQECGLELGDFVWTGGDTHLYLNHLEQVNKQLERTPKALPIMKLNPDVKSVF 236 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+P+ I A V+V Sbjct: 237 DFKFEDFELVNYDPYPGIKAPVAV 260 >gi|206577831|ref|YP_002236751.1| thymidylate synthase [Klebsiella pneumoniae 342] gi|288933717|ref|YP_003437776.1| thymidylate synthase [Klebsiella variicola At-22] gi|290511203|ref|ZP_06550572.1| thymidylate synthase [Klebsiella sp. 1_1_55] gi|206566889|gb|ACI08665.1| thymidylate synthase [Klebsiella pneumoniae 342] gi|288888446|gb|ADC56764.1| thymidylate synthase [Klebsiella variicola At-22] gi|289776196|gb|EFD84195.1| thymidylate synthase [Klebsiella sp. 1_1_55] Length = 264 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 156/264 (59%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHDNNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I + Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|50119928|ref|YP_049095.1| thymidylate synthase [Pectobacterium atrosepticum SCRI1043] gi|62901301|sp|Q6D8I6|TYSY_ERWCT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|49610454|emb|CAG73899.1| thymidylate synthase [Pectobacterium atrosepticum SCRI1043] Length = 264 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL+ + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ LR Sbjct: 61 WFLNGDTNVAYLNENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHMEQTHLQLSREPRALPKLVIKRRPDTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|88812437|ref|ZP_01127686.1| thymidylate synthase [Nitrococcus mobilis Nb-231] gi|88790223|gb|EAR21341.1| thymidylate synthase [Nitrococcus mobilis Nb-231] Length = 277 Score = 348 bits (894), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 164/277 (59%), Positives = 205/277 (74%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LLRHV+ G + DRTG GT S FGYQMRFDL +G PLLTTK++H +S+VHELL Sbjct: 1 MKQYLELLRHVLHQGVRKSDRTGTGTLSVFGYQMRFDLQQGLPLLTTKRLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L G+SN+ YL +GVSIWDEWAD++GELGPIYG QWR WP DG+ IDQI+ ++ ++ Sbjct: 61 WLLSGESNIGYLKENGVSIWDEWADENGELGPIYGPQWRKWPAQDGSTIDQITDVIDGIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRRHIVSAWNVA + +MALP CH LFQFYV +GKLSCQLYQRS Sbjct: 121 QNPNSRRHIVSAWNVAYLPEESLSPQANVAQGRMALPACHALFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLT M+A G G+F+ T GDVH+Y+NH EQA LQLSR+PR L Sbjct: 181 CDVFLGVPFNIASYALLTHMIAQECGLAPGDFVWTGGDVHVYSNHLEQARLQLSRAPRPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++II + ++ Y+DF + Y+PH AI A ++V Sbjct: 241 PKLIIKRKPDSIFNYCYDDFEIVGYDPHPAIKAPIAV 277 >gi|126662422|ref|ZP_01733421.1| thymidylate synthetase [Flavobacteria bacterium BAL38] gi|126625801|gb|EAZ96490.1| thymidylate synthetase [Flavobacteria bacterium BAL38] Length = 274 Score = 348 bits (894), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 158/277 (57%), Positives = 205/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV++ G+ + DRTG GT S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLVKHVLENGNQKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G LGP+YG QWR+W + IDQI+ ++++L+ Sbjct: 61 WFLNGDTNIKYLQENGVKIWDEWADENGNLGPVYGHQWRNW---NSEEIDQITELIETLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 TNPNSRRMLVSAWNPSVLPDTSVSFAENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V Q G+FIHT GD H+YNNH EQ +LQLSR R L Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCDLQVGDFIHTFGDAHIYNNHMEQVELQLSRDCRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP I ++ F++EDFTL Y+PH I V+V Sbjct: 238 PTMKLNPEIKNIFDFKFEDFTLEGYDPHPHIKGIVAV 274 >gi|83648497|ref|YP_436932.1| thymidylate synthase [Hahella chejuensis KCTC 2396] gi|123753522|sp|Q2SA17|TYSY_HAHCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|83636540|gb|ABC32507.1| Thymidylate synthase [Hahella chejuensis KCTC 2396] Length = 264 Score = 348 bits (894), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 158/264 (59%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++RHV + G+ + DRTG GTRS FGYQMRFDL +GFPL+TTKK+H +S+++ELL Sbjct: 1 MKQYLDMMRHVREQGAVKTDRTGTGTRSVFGYQMRFDLQQGFPLVTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD+ G+LGP+YG QWRSWP +G IDQIS+++ ++ Sbjct: 61 WFLNGDTNIKYLKDNGVSIWDEWADESGDLGPVYGYQWRSWPAPNGEHIDQISNVLAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRH+V A+N A +D+MALPPCH +FQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRHMVVAYNPAFVDQMALPPCHAMFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M A G+FI T GDVHLYNNH +QA QL R PR LPQ+ I L Sbjct: 181 YALLTHMFAQQCDLDVGDFIWTGGDVHLYNNHLDQAKEQLDREPRPLPQLQIRRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+PH I A V+V Sbjct: 241 DYEFEDFEITGYDPHPHIKAPVAV 264 >gi|332285402|ref|YP_004417313.1| thymidylate synthase [Pusillimonas sp. T7-7] gi|330429355|gb|AEC20689.1| thymidylate synthase [Pusillimonas sp. T7-7] Length = 264 Score = 348 bits (893), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY D +RHV + G+++ DRTG GTRS FG+QMRFDLS GFPL+T+KK+H KS+ ELL Sbjct: 1 MHQYEDFMRHVYEHGTEKTDRTGTGTRSVFGHQMRFDLSAGFPLITSKKLHTKSIFIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSNV +L GVSIW+EWAD++G+LGP+YGVQWRSWP G IDQI+ ++Q +R Sbjct: 61 WFLRGDSNVRWLQEQGVSIWNEWADQNGDLGPVYGVQWRSWPTPGGQHIDQIAQVLQQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QNPDSRRLIVSAWNVAEIPNMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+FI T GD HLY+NH EQ +LQLSR P P++ I + Sbjct: 181 YALLTHMVAQQCDLEVGDFIWTGGDCHLYSNHMEQVELQLSRKPYPYPKLQIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF + YE H I A V+V Sbjct: 241 DYRYEDFEIVGYESHPHIKAPVAV 264 >gi|254495239|ref|ZP_05108163.1| Thymidylate synthase [Polaribacter sp. MED152] gi|85819592|gb|EAQ40749.1| Thymidylate synthase [Polaribacter sp. MED152] Length = 274 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 155/277 (55%), Positives = 210/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+V+ELL Sbjct: 1 MKQYHDLVKHVLENGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+NV YL +GV IW+EWAD++G+LGP+YG QWR+W + + +DQ+ ++ +L+ Sbjct: 61 WFIKGDTNVKYLQENGVRIWNEWADENGDLGPVYGHQWRNW---NSDEVDQLKEVIATLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 ++P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 SNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVSDGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+YNNH EQ +LQLSR R L Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYNNHVEQLELQLSRDIRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +N I ++ F ++DF L+ Y PH I KV+V Sbjct: 238 PKMKLNTAITNIEDFTFDDFELQDYNPHPHIKGKVAV 274 >gi|317049336|ref|YP_004116984.1| thymidylate synthase [Pantoea sp. At-9b] gi|316950953|gb|ADU70428.1| thymidylate synthase [Pantoea sp. At-9b] Length = 264 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+++ DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMQHVLNEGAEKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V+IWDEWAD++G+LGP+YG QWRSW + +G IDQIS +++ L+ Sbjct: 61 WFLQGDTNIGYLKDNKVTIWDEWADENGDLGPVYGKQWRSWGNANGEQIDQISRVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL+R PR LP++II + Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLIIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+PH AI A V++ Sbjct: 241 DYQFEDFEIEGYDPHPAIKAPVAI 264 >gi|161870554|ref|YP_001599726.1| thymidylate synthase [Neisseria meningitidis 053442] gi|161596107|gb|ABX73767.1| thymidylate synthase [Neisseria meningitidis 053442] Length = 231 Score = 348 bits (892), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 155/231 (67%), Positives = 189/231 (81%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 MRFDL KGFPLLTTKK+H +S++HELLWFL+GD+N+ YL + VSIWDEWAD++G+LGP+ Sbjct: 1 MRFDLGKGFPLLTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPV 60 Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG QWR+WP DG IDQI+++++ ++ +P SRR IVSAWN AL+D+MALPPCH LFQFY Sbjct: 61 YGYQWRNWPAPDGRHIDQIANVLEQIKKNPDSRRLIVSAWNPALVDEMALPPCHTLFQFY 120 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V +GKLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G + GEF+HT GD HLY NHF Sbjct: 121 VADGKLSCQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHF 180 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 EQA LQL R PR LP M INP + DL SF++EDF L Y+PH I A VSV Sbjct: 181 EQAALQLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV 231 >gi|72118031|gb|AAZ60294.1| thymidylate synthase [Ralstonia eutropha JMP134] Length = 281 Score = 347 bits (891), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDLS+GFP++TTKK+H KS++ ELL Sbjct: 18 MKQYLDFMRHVFEHGTEKADRTGTGTRSVFGYQMRFDLSQGFPVVTTKKLHLKSIILELL 77 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GVSIWDEWAD++GELGP+YG QWRSWP DG +DQI+ ++ +R Sbjct: 78 WFLQGSTNVRWLQENGVSIWDEWADENGELGPVYGSQWRSWPTPDGRHVDQITDLLNQIR 137 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 138 ENPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 197 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD H+Y+NH+EQ QLSR P LP + I + Sbjct: 198 YALLTHMIAQQTGLDVGDFVWTGGDCHIYSNHYEQVQTQLSREPLPLPTLKIVRKPDSIF 257 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF L Y+ H AI A V+V Sbjct: 258 DYRYEDFELVGYQSHPAIKAPVAV 281 >gi|300724836|ref|YP_003714161.1| thymidylate synthetase [Xenorhabdus nematophila ATCC 19061] gi|62901326|sp|Q6REU8|TYSY_XENNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|46102543|gb|AAS80323.1| thymidylate synthetase [Xenorhabdus nematophila] gi|297631378|emb|CBJ92073.1| thymidylate synthetase [Xenorhabdus nematophila ATCC 19061] Length = 264 Score = 347 bits (891), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 156/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTAKDDRTGTGTRSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YLH +GVSIWDEWAD++G+LGP+YG QWR+W DG IDQ++ +++ L+ Sbjct: 61 WFLNGDTNIKYLHDNGVSIWDEWADENGDLGPVYGKQWRAWGSADGRHIDQLTQVLEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 GDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCNLDVGDFVWTGGDTHLYNNHLEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+P+ I A V++ Sbjct: 241 DYRFEDFEIVDYDPYPGIKAPVAI 264 >gi|253576709|ref|ZP_04854036.1| thymidylate synthase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843919|gb|EES71940.1| thymidylate synthase [Paenibacillus sp. oral taxon 786 str. D14] Length = 264 Score = 347 bits (891), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 158/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YLDLL V+K G+ + DRTGVGTRS FG Q+RFDLS+GFPL+TTK++H KSV+HELL Sbjct: 1 MRKYLDLLEDVLKNGTPKEDRTGVGTRSVFGRQLRFDLSEGFPLVTTKRIHLKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL HGV IWDEWAD++G+LGP+YG QWRSW DG IDQI+++V++++ Sbjct: 61 WFLRGDTNIAYLKEHGVRIWDEWADENGDLGPVYGSQWRSWEAPDGRKIDQIANVVEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRH+VSAWNVA +D+M LPPCH +FQFYV NGKLSC L RS D FLG+PFNIAS Sbjct: 121 KNPDSRRHLVSAWNVAEVDQMKLPPCHFVFQFYVANGKLSCMLTMRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GEFI + GDVH+YNNH EQ QL R P LP+++I + Sbjct: 181 YALLTHMIAQQCDLEVGEFIWSGGDVHIYNNHIEQVKTQLEREPYPLPKLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF Y+ H I A V+V Sbjct: 241 DYKYEDFEFIDYQYHPTIKATVAV 264 >gi|187927913|ref|YP_001898400.1| thymidylate synthase [Ralstonia pickettii 12J] gi|187724803|gb|ACD25968.1| Thymidylate synthase [Ralstonia pickettii 12J] Length = 264 Score = 347 bits (890), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L GFPL+TTKKVH KS+V+ELL Sbjct: 1 MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGP+YG QWRSWP +G IDQI+ ++ ++ Sbjct: 61 WFLQGSTNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G G+F+ T GD HLYNNHFEQ QL+R P LP++II + Sbjct: 181 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVQTQLAREPLPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H AI A V+V Sbjct: 241 DYQYEDFEILGYQSHPAIKAPVAV 264 >gi|319950119|ref|ZP_08024059.1| thymidylate synthase [Dietzia cinnamea P4] gi|319436222|gb|EFV91402.1| thymidylate synthase [Dietzia cinnamea P4] Length = 266 Score = 347 bits (890), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 166/263 (63%), Positives = 207/263 (78%), Gaps = 5/263 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL+ V++ G+ + DRTG GTRS FG+Q+R+DL++GFPL+TTK+VH+KSV +ELLWFL Sbjct: 7 YEDLLQLVLEQGAPKADRTGTGTRSLFGHQLRYDLAQGFPLITTKRVHFKSVAYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +GV+IWDEWAD DGELGP+YGVQWRSWP DG IDQI++ V+ LRADP Sbjct: 67 RGDSNVGWLRENGVTIWDEWADADGELGPVYGVQWRSWPTPDGAHIDQIAAAVELLRADP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ + +MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 127 DSRRNIVSAWNVSELSEMALPPCHLLFQFYVADGKLSCQLYQRSADLFLGVPFNIASYSL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN--PNIVDLLS 241 LT M+A +G + GEFI T GD H+Y+NH EQ QLSR P P++ +N P+I D Sbjct: 187 LTHMIAQQVGLEVGEFIWTGGDCHIYDNHVEQVRTQLSREPYPYPELRLNRAPSIFD--- 243 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + YE H I A V+V Sbjct: 244 YTFEDFEVVGYEHHPGIKAPVAV 266 >gi|264679393|ref|YP_003279300.1| thymidylate synthase [Comamonas testosteroni CNB-2] gi|262209906|gb|ACY34004.1| thymidylate synthase [Comamonas testosteroni CNB-2] Length = 294 Score = 347 bits (890), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF Sbjct: 32 QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 LRGDSNV +L G +IWDEWADK G+LGP+YGVQWRSWP DG +DQI+ +V+ L++ Sbjct: 92 LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLKS 151 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR IVSAWNVA +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY Sbjct: 152 NPDSRRVIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 211 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA G + G+FI T GD H+YNNHFEQ QLSR P P + I + Sbjct: 212 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPASIFD 271 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + YEDF + Y+ HA I A V+V Sbjct: 272 YEYEDFEVLDYQHHAGIKAPVAV 294 >gi|83745787|ref|ZP_00942844.1| Thymidylate synthase [Ralstonia solanacearum UW551] gi|83727477|gb|EAP74598.1| Thymidylate synthase [Ralstonia solanacearum UW551] Length = 334 Score = 347 bits (890), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 71 MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 130 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 131 WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 190 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 191 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 250 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G+F+ T GD HLYNNHFEQ + QL+R+P LP++ I + Sbjct: 251 YALLTHMIAQQTSLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIF 310 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+ HAAI A V+V Sbjct: 311 DYQFEDFEIVGYQSHAAIKAPVAV 334 >gi|302529833|ref|ZP_07282175.1| thymidylate synthase [Streptomyces sp. AA4] gi|302438728|gb|EFL10544.1| thymidylate synthase [Streptomyces sp. AA4] Length = 265 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 161/262 (61%), Positives = 203/262 (77%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL+HV+ G+++ DRTG GTRS FG+Q+R+ L+ GFPL+TTKKVH++S+ +ELLWF Sbjct: 5 QYEDLLQHVLDTGAEKGDRTGTGTRSIFGHQLRYRLADGFPLITTKKVHFRSIAYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV++L HGV+IWDEWA DG+LGP+YGVQWRSWP DG +DQIS ++++LR + Sbjct: 65 LRGDSNVTWLRDHGVTIWDEWAAPDGDLGPVYGVQWRSWPTPDGGHVDQISDVLRTLREN 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV I +MALPPCH FQFYV NG+LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRIIVSAWNVGDIPQMALPPCHAFFQFYVANGELSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A +G + G+FI T GD H+Y+NH EQ QLSR R P + + P L + Sbjct: 185 LLTHMIADQVGLRVGDFIWTGGDCHIYDNHVEQVRKQLSRDARPFPTLSLKP-AESLFDY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 RYEDF+L Y+PH I A V+V Sbjct: 244 RYEDFSLEGYDPHPGIKAPVAV 265 >gi|114776706|ref|ZP_01451749.1| thymidylate synthase [Mariprofundus ferrooxydans PV-1] gi|114552792|gb|EAU55223.1| thymidylate synthase [Mariprofundus ferrooxydans PV-1] Length = 277 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 159/277 (57%), Positives = 201/277 (72%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV G+ + DRTG GTRS FG+QMRFDLS GFP++TTKKVH KS++HELL Sbjct: 1 MKSYLDLMRHVRDHGTQKGDRTGTGTRSVFGHQMRFDLSAGFPMVTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N +YL +GVSIW+EWA +DG LGP+YG QWR+WP G IDQIS +++ ++ Sbjct: 61 WFLKGETNTAYLSENGVSIWNEWATEDGSLGPVYGYQWRNWPTPSGESIDQISELIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 A P SRR IVSAWNVA + KMAL PCH FQFYV +GKLSCQLYQRS Sbjct: 121 ARPNSRRLIVSAWNVADLPDESISPQANVAEGKMALAPCHAFFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V + G+FIHT GD HLY+NH EQ + QL+R L Sbjct: 181 ADIFLGVPFNIASYALLTMMIAQVCELEPGDFIHTFGDAHLYSNHTEQVETQLARECYPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + ++ F Y+DF L Y+ H I A +++ Sbjct: 241 PTMKLNPAVKNIFDFTYDDFELSDYQCHPGIRAPIAI 277 >gi|117618975|ref|YP_855217.1| thymidylate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166231685|sp|A0KG32|TYSY_AERHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|117560382|gb|ABK37330.1| thymidylate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 264 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 156/264 (59%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL Sbjct: 1 MRAYLDLMQKILDEGTVKSDRTGTGTISLFGHQMRFNLAEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG+VIDQI V ++ Sbjct: 61 WFLNGDTNTAYLKEHGVSIWDEWADENGDLGPVYGAQWRSWPAADGSVIDQIQKAVDDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+F+ T GDVHLY+NH EQ LQL+R PR LP ++I + Sbjct: 181 YALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLTREPRPLPTLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+PH I A V++ Sbjct: 241 DYKFEDFEIEGYDPHPGIKAPVAI 264 >gi|207743702|ref|YP_002260094.1| thymidylate synthase (ts) (tsase) protein [Ralstonia solanacearum IPO1609] gi|206595101|emb|CAQ62028.1| thymidylate synthase (ts) (tsase) protein [Ralstonia solanacearum IPO1609] Length = 276 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 13 MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 72 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 73 WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 132 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 133 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 192 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G+F+ T GD HLYNNHFEQ + QL+R+P LP++ I + Sbjct: 193 YALLTHMIAQQTSLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIF 252 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+ HAAI A V+V Sbjct: 253 DYQFEDFEIVGYQSHAAIKAPVAV 276 >gi|54026996|ref|YP_121238.1| thymidylate synthase [Nocardia farcinica IFM 10152] gi|62901241|sp|Q5YPL7|TYSY_NOCFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54018504|dbj|BAD59874.1| putative thymidylate synthase [Nocardia farcinica IFM 10152] Length = 266 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 166/262 (63%), Positives = 198/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLR V+ G+ + DRTG GTRS FG+Q+R+DLS GFPL+TTKKVH KS+V+ELLWF Sbjct: 6 QYEDLLRLVLDTGTAKGDRTGTGTRSIFGHQLRYDLSAGFPLITTKKVHLKSIVYELLWF 65 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L HGV+IWDEWAD GELGP+YGVQWRSWP DG IDQIS ++Q+LR D Sbjct: 66 LRGDSNVGWLREHGVTIWDEWADPQGELGPVYGVQWRSWPTPDGTHIDQISQVLQTLRTD 125 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 126 PDSRRMIVSAWNVAELDRMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 185 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A + GEFI T GD H+Y+NH EQ QL R P P++ + P L + Sbjct: 186 LLTHMVAQQTELEPGEFIWTGGDCHIYDNHVEQVTEQLGREPYPFPRLELRP-APSLFDY 244 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+ED T+ Y H AI A V+V Sbjct: 245 RFEDVTVTDYRHHPAIKAPVAV 266 >gi|260599168|ref|YP_003211739.1| thymidylate synthase [Cronobacter turicensis z3032] gi|260218345|emb|CBA33364.1| Thymidylate synthase [Cronobacter turicensis z3032] Length = 264 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 157/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMNKVLHEGAQKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ L+ Sbjct: 61 WFLKGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRSWTAPDGRHIDQLETVINQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL+R PR LP++II L Sbjct: 181 YALLVHMMAQQCDLEPGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|161611264|ref|YP_295138.2| thymidylate synthase [Ralstonia eutropha JMP134] Length = 264 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDLS+GFP++TTKK+H KS++ ELL Sbjct: 1 MKQYLDFMRHVFEHGTEKADRTGTGTRSVFGYQMRFDLSQGFPVVTTKKLHLKSIILELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GVSIWDEWAD++GELGP+YG QWRSWP DG +DQI+ ++ +R Sbjct: 61 WFLQGSTNVRWLQENGVSIWDEWADENGELGPVYGSQWRSWPTPDGRHVDQITDLLNQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ENPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD H+Y+NH+EQ QLSR P LP + I + Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHIYSNHYEQVQTQLSREPLPLPTLKIVRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF L Y+ H AI A V+V Sbjct: 241 DYRYEDFELVGYQSHPAIKAPVAV 264 >gi|300718158|ref|YP_003742961.1| Thymidylate synthase [Erwinia billingiae Eb661] gi|299063994|emb|CAX61114.1| Thymidylate synthase [Erwinia billingiae Eb661] Length = 264 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 156/264 (59%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S+VHELL Sbjct: 1 MKQYLDLMRKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + V+IWDEWAD++G+LGP+YG QWRSW DG IDQ+++++Q L+ Sbjct: 61 WFLNGDTNTAYLQENKVTIWDEWADENGDLGPVYGKQWRSWGAADGREIDQLTNVLQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQTHLQLTREPRPLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPPIKAPVAI 264 >gi|225010453|ref|ZP_03700924.1| Thymidylate synthase [Flavobacteria bacterium MS024-3C] gi|225005282|gb|EEG43233.1| Thymidylate synthase [Flavobacteria bacterium MS024-3C] Length = 274 Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 164/277 (59%), Positives = 208/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL HV+K G + DRTG GT S FGYQMRF+LSKGFP++TTKK+H KS+V+ELL Sbjct: 1 MKQYHDLLNHVLKNGVQKGDRTGTGTLSVFGYQMRFNLSKGFPMVTTKKLHLKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD +G+LGP+YG QWR+W +G IDQI ++QS++ Sbjct: 61 WFLKGDTNIGYLQENGVRIWNEWADSNGDLGPVYGKQWRNW---NGEEIDQIKEVIQSIK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH FQFYV GKLSCQLYQRS Sbjct: 118 ENPNSRRMIVSAWNPSVLPDPKTSFEENVAKGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G + G+FIHT GD H+YNNH EQ +LQLSR+P+ L Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGLEAGDFIHTFGDAHIYNNHMEQIELQLSRTPKDL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP I D+ F +EDFTL +Y+PH I V++ Sbjct: 238 PKMTLNPEIKDIFDFDFEDFTLENYDPHPHIKGAVAI 274 >gi|329296900|ref|ZP_08254236.1| thymidylate synthase [Plautia stali symbiont] Length = 264 Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+++ DRTG GT S FG+QMRF+L GFPL+TTKKVH +S++HELL Sbjct: 1 MKQYLDLMQHVLNEGAEKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKVHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+++ YL + V+IWDEWAD++G+LGP+YG QWRSW G IDQIS +++ L+ Sbjct: 61 WFLKGDTSIGYLKENKVTIWDEWADENGDLGPVYGKQWRSWGKASGEEIDQISKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL+R PR LP+++I + Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH AI A V+V Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264 >gi|170739398|ref|YP_001768053.1| thymidylate synthase [Methylobacterium sp. 4-46] gi|168193672|gb|ACA15619.1| Thymidylate synthase [Methylobacterium sp. 4-46] Length = 264 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 158/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLR ++ G ++ DRTG GT S FG+QMRFDL++GFPL+TTK++H KS++HELL Sbjct: 1 MRAYHDLLRRILDDGVEKHDRTGTGTLSVFGHQMRFDLAEGFPLVTTKRLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL +GV+IWDEWAD+ G+LGP+YG QWRSW DG +DQI+ ++ +R Sbjct: 61 WFLAGDTNVAYLQSNGVTIWDEWADEHGDLGPVYGKQWRSWAKPDGGSLDQIAWVLDEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWN A +D+MAL PCHCLFQFYV G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNPADLDRMALAPCHCLFQFYVAQGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V+ G+F+HTLGD HLY NH QA QL+R R LPQ+ +NP + L Sbjct: 181 YALLTAMMAQVLDLVPGDFVHTLGDAHLYVNHVAQARQQLARDHRPLPQLRLNPQVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR++D L Y+PH AI A V+V Sbjct: 241 DFRHDDVVLEGYDPHPAIRAPVAV 264 >gi|299530475|ref|ZP_07043895.1| thymidylate synthase [Comamonas testosteroni S44] gi|298721451|gb|EFI62388.1| thymidylate synthase [Comamonas testosteroni S44] Length = 282 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF Sbjct: 20 QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 79 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 LRGDSNV +L G +IWDEWADK G+LGP+YGVQWRSWP DG +DQI+ +V+ L++ Sbjct: 80 LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLKS 139 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR IVSAWNVA +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY Sbjct: 140 NPDSRRIIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 199 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA G + G+FI T GD H+YNNHFEQ QLSR P P + I + Sbjct: 200 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPASIFD 259 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + YEDF + Y+ HA I A V+V Sbjct: 260 YEYEDFEVLDYQHHAGIKAPVAV 282 >gi|330831181|ref|YP_004394133.1| Thymidylate synthase [Aeromonas veronii B565] gi|328806317|gb|AEB51516.1| Thymidylate synthase [Aeromonas veronii B565] Length = 264 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 156/264 (59%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL Sbjct: 1 MRAYLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG+VIDQI V ++ Sbjct: 61 WFLNGDTNTAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAADGSVIDQIQKAVDDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+F+ T GDVHLY+NH EQ LQLSR PR LP ++I + Sbjct: 181 YALLTHMMAQQCNLEVGDFVWTGGDVHLYSNHMEQTALQLSREPRPLPTLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+PH I A V++ Sbjct: 241 DYKFEDFEIEGYDPHPGIKAPVAI 264 >gi|156932697|ref|YP_001436613.1| thymidylate synthase [Cronobacter sakazakii ATCC BAA-894] gi|166231698|sp|A7MR31|TYSY_ENTS8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|156530951|gb|ABU75777.1| hypothetical protein ESA_00482 [Cronobacter sakazakii ATCC BAA-894] Length = 264 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 156/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMNKVLHEGAQKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ L+ Sbjct: 61 WFLKGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRSWATPDGRHIDQLETVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEPGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|50954682|ref|YP_061970.1| thymidylate synthase [Leifsonia xyli subsp. xyli str. CTCB07] gi|62901289|sp|Q6AFI0|TYSY_LEIXX RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|50951164|gb|AAT88865.1| thymidylate synthase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 269 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 165/261 (63%), Positives = 197/261 (75%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ GS + DRTG GTRS FG Q+RFDL+ GFPL+TTK+VH+KS+ +ELLWFL Sbjct: 9 YEDLLRDVLANGSHKSDRTGTGTRSVFGRQLRFDLADGFPLITTKRVHFKSIAYELLWFL 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +GVSIWDEWAD+ GELGP+YGVQWRSWP DG IDQI +V +LR DP Sbjct: 69 RGDSNVGWLRENGVSIWDEWADERGELGPVYGVQWRSWPSPDGTHIDQIQQVVDTLRRDP 128 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNVA I MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 129 DSRRIIVSAWNVADIPDMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 188 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT+M+A +G + GEF+ T GDVH+Y+NH EQ + QLSR+P P + + +R Sbjct: 189 LTLMVAQQVGLEPGEFVWTGGDVHIYDNHIEQVNEQLSRNPFPAPALRFARRPESVFDYR 248 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YEDF L Y H AI A V+V Sbjct: 249 YEDFVLEGYRHHPAIRAAVAV 269 >gi|271499466|ref|YP_003332491.1| thymidylate synthase [Dickeya dadantii Ech586] gi|270343021|gb|ACZ75786.1| thymidylate synthase [Dickeya dadantii Ech586] Length = 264 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 156/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YLH + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ+ ++++ L+ Sbjct: 61 WFLNGDTNVGYLHDNKVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLQTVLRQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYNNHLEQTRLQLSREPRPLPKLVIKRRPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V+V Sbjct: 241 DYRFEDFDIEGYDPHPAIKAPVAV 264 >gi|319779101|ref|YP_004130014.1| Thymidylate synthase [Taylorella equigenitalis MCE9] gi|317109125|gb|ADU91871.1| Thymidylate synthase [Taylorella equigenitalis MCE9] Length = 264 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D +RHV + G D+ DRTG GT+S F YQMRFDL +GFP++TTKK+H KS+++ELL Sbjct: 1 MRQYEDFMRHVFETGVDKTDRTGTGTKSVFAYQMRFDLQEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSN +L GVSIW+EWAD++GELGPIYGVQWRSWP DG IDQIS +V ++ Sbjct: 61 WFLRGDSNAKWLQERGVSIWNEWADENGELGPIYGVQWRSWPAPDGTKIDQISQVVDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV LI +M LPPCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGLIPQMKLPPCHAFFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A GEFI T GD H+Y+NHFEQ QLSR P P++ I + Sbjct: 181 YSLLTHMIAQQCNLDVGEFIWTGGDCHIYSNHFEQVKEQLSRDPYPYPKLHIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+ H I A V+V Sbjct: 241 DYEFEDFEVMDYQHHPHIKAPVAV 264 >gi|326334727|ref|ZP_08200934.1| thymidylate synthase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693177|gb|EGD35109.1| thymidylate synthase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 274 Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 160/277 (57%), Positives = 200/277 (72%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL H++ G + DRTG GT S FGYQ R +L +GFPLLTTKK+H KSV++ELL Sbjct: 1 MQAYKDLLNHILTHGHSKDDRTGTGTISVFGYQFRCNLQEGFPLLTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL HGV IW+EWAD+ G+LGPIYG QWR+W + IDQI+ ++ +L+ Sbjct: 61 WFLRGDTNIHYLTEHGVRIWNEWADEKGDLGPIYGAQWRNW---NNEGIDQIAQVLHTLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ +K ALPPCH LFQFYV GKLSCQLYQRS Sbjct: 118 TNPDSRRMVVSAWNPSVMPDTSVSFAENVAHNKAALPPCHALFQFYVMEGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASY+LLT M+A V G Q G+F+H+ GD+H+Y NH EQ +LQLSR PR L Sbjct: 178 ADAFLGVPFNIASYALLTQMMAHVTGLQVGDFVHSFGDLHIYKNHLEQVELQLSREPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +F Y DFTL Y+P+ I KVSV Sbjct: 238 PTMKLNPQVKDLFAFDYPDFTLEGYDPYPTIKGKVSV 274 >gi|238918743|ref|YP_002932257.1| thymidylate synthase, [Edwardsiella ictaluri 93-146] gi|259550777|sp|C5BH86|TYSY_EDWI9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|238868311|gb|ACR68022.1| thymidylate synthase, putative [Edwardsiella ictaluri 93-146] Length = 264 Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMRKVLAEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++NVSYLH + V+IWDEWAD +G+LGP+YG QWR+W DG +DQIS +++ LR Sbjct: 61 WFLNGETNVSYLHENNVTIWDEWADDNGDLGPVYGKQWRAWGCADGRQVDQISQVMEQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MAL PCH FQFYV +G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QEPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + Q G+F+ T GD HLY+NH EQ LQL+R PR LP++++ + Sbjct: 181 YALLVHMMAQQLDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRALPRLVLARRPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V+V Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAV 264 >gi|218550075|ref|YP_002383866.1| thymidylate synthase [Escherichia fergusonii ATCC 35469] gi|226713170|sp|B7LNI2|TYSY_ESCF3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|218357616|emb|CAQ90255.1| thymidylate synthetase [Escherichia fergusonii ATCC 35469] gi|324114883|gb|EGC08849.1| thymidylate synthase [Escherichia fergusonii B253] gi|325498403|gb|EGC96262.1| thymidylate synthase [Escherichia fergusonii ECD227] Length = 264 Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR+LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRSLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|313835878|gb|EFS73592.1| thymidylate synthase [Propionibacterium acnes HL037PA2] gi|314927122|gb|EFS90953.1| thymidylate synthase [Propionibacterium acnes HL044PA1] gi|314970765|gb|EFT14863.1| thymidylate synthase [Propionibacterium acnes HL037PA3] gi|328906030|gb|EGG25805.1| thymidylate synthase [Propionibacterium sp. P08] Length = 270 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 162/270 (60%), Positives = 204/270 (75%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+ ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLQRILDEGVRREDRTGTGTLSVFGHQMIFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+ V +LH + + IWDEWAD++G+LGPIYG QWRSWPD DG IDQI+ +++ +R Sbjct: 61 WFLRGDTTVGWLHDNAIHIWDEWADENGDLGPIYGRQWRSWPDGDGGTIDQIAKVIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA +D+MALPPCH LFQFYV D G+ LSCQLYQRSGD FLG+ Sbjct: 121 TNPWSRRHIVSAWNVAEVDEMALPPCHTLFQFYVTPDDRGEPTWLSCQLYQRSGDTFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD HLY NH +QA QL R PR LP + +NP Sbjct: 181 PFNIASYALLTYLVASVTGLKPLRFVHTLGDAHLYLNHLDQAHEQLKREPRHLPTLTVNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 241 NVRDIDGFELSDLTLTGYDPYPALPAPIAV 270 >gi|311278228|ref|YP_003940459.1| thymidylate synthase [Enterobacter cloacae SCF1] gi|308747423|gb|ADO47175.1| thymidylate synthase [Enterobacter cloacae SCF1] Length = 264 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGAQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + V+IWDEWAD+ G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLKGDTNVAYLHENNVTIWDEWADEQGNLGPVYGKQWRAWPTPDGRHIDQITTVINQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCSLEVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|237729788|ref|ZP_04560269.1| thymidylate synthetase [Citrobacter sp. 30_2] gi|226908394|gb|EEH94312.1| thymidylate synthetase [Citrobacter sp. 30_2] Length = 264 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|329889820|ref|ZP_08268163.1| thymidylate synthase [Brevundimonas diminuta ATCC 11568] gi|328845121|gb|EGF94685.1| thymidylate synthase [Brevundimonas diminuta ATCC 11568] Length = 285 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 164/262 (62%), Positives = 198/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LLR ++ G R DRTG GT FG QMRFDLSKGFPLLTTKK+H +S+ ELLWF Sbjct: 25 QYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPLLTTKKLHTRSIFIELLWF 84 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG++N+++L +GVSIWDEWAD DG+LGP+YG QWRSW +G IDQI +V L+ + Sbjct: 85 LRGETNIAWLKDNGVSIWDEWADADGDLGPVYGKQWRSWAAPNGASIDQIQKLVHGLKTN 144 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRRHIVSAWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 145 PNSRRHIVSAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 204 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT MLA V+G + G+F+HT GD HLY NH EQA+LQLSR+P LP + + + DL F Sbjct: 205 LLTYMLAKVVGLEPGDFVHTFGDAHLYLNHLEQAELQLSRAPLPLPTLSV-ADKDDLFGF 263 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 DF L Y+ I A V+V Sbjct: 264 ELSDFVLNDYQSWPHIKAPVAV 285 >gi|241662502|ref|YP_002980862.1| thymidylate synthase [Ralstonia pickettii 12D] gi|240864529|gb|ACS62190.1| thymidylate synthase [Ralstonia pickettii 12D] Length = 280 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L GFPL+TTKKVH KS+V+ELL Sbjct: 17 MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 76 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGP+YG QWRSWP +G IDQI+ ++ ++ Sbjct: 77 WFLQGSTNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 136 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 137 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 196 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G G+F+ T GD HLYNNHFEQ + QL+R P LP++ I + Sbjct: 197 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLAREPLPLPKLHIKRKPESIF 256 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H AI A V+V Sbjct: 257 DYQYEDFEIVGYQSHPAIKAPVAV 280 >gi|331654309|ref|ZP_08355309.1| thymidylate synthase [Escherichia coli M718] gi|331047691|gb|EGI19768.1| thymidylate synthase [Escherichia coli M718] Length = 264 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLRGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|323946537|gb|EGB42561.1| thymidylate synthase [Escherichia coli H120] Length = 264 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHALFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|88802703|ref|ZP_01118230.1| thymidylate synthase [Polaribacter irgensii 23-P] gi|88781561|gb|EAR12739.1| thymidylate synthase [Polaribacter irgensii 23-P] Length = 274 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 154/277 (55%), Positives = 207/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLVKHVLESGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL +GV IW+ WAD++G+LGP+YG QWR+W D IDQ+ ++ +L+ Sbjct: 61 WFIKGDTNIKYLQDNGVKIWNSWADENGDLGPVYGHQWRNWNSDD---IDQLKEVITTLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +V+AWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 TNPNSRRMMVAAWNPSVMPDTAASFSDNVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+YNNH EQ +LQLSR R L Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYNNHIEQLELQLSREIRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +N I D+ +F +EDF L Y PH I KV++ Sbjct: 238 PKMKLNAAIEDIENFTFEDFELLEYNPHPHIKGKVAI 274 >gi|296104486|ref|YP_003614632.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058945|gb|ADF63683.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 264 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|283786527|ref|YP_003366392.1| thymidylate synthase [Citrobacter rodentium ICC168] gi|282949981|emb|CBG89609.1| thymidylate synthase [Citrobacter rodentium ICC168] Length = 264 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTKKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI+++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVMKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHLEQTRLQLSREPRALPKLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|294084290|ref|YP_003551048.1| thymidylate synthase protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663863|gb|ADE38964.1| thymidylate synthase protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 264 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G DR DRTG GTR+ FG+QMRFDL+ GFP+LTTKK+H KS++HELL Sbjct: 1 MQQYLDLLARVMDEGIDRDDRTGTGTRAVFGHQMRFDLADGFPVLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR W DG IDQ++ +++ +R Sbjct: 61 WFISGDTNIRYLQDNGVSIWDEWADENGDLGPVYGQQWRRWKTPDGAEIDQLAELIRMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR ++SAWN A I MALPPCHCLFQF V +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ETPTSRRLMLSAWNPADIPNMALPPCHCLFQFQVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + + G F+HTLGD H+Y NHF+QA LQL+R+P LP+++I+ D+ Sbjct: 181 YALLTHMIAVICDLEAGTFVHTLGDAHIYANHFDQARLQLTRTPGALPKLLIHNRPKDID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF + Y A I A ++V Sbjct: 241 GFKFEDFEIIDYNAQAHISAPIAV 264 >gi|295097375|emb|CBK86465.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 264 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|123443517|ref|YP_001007490.1| thymidylate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166231744|sp|A1JPC9|TYSY_YERE8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|122090478|emb|CAL13346.1| thymidylate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 264 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S +VQ L+ Sbjct: 61 WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKSKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A +++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264 >gi|223937832|ref|ZP_03629732.1| Thymidylate synthase [bacterium Ellin514] gi|223893438|gb|EEF59899.1| Thymidylate synthase [bacterium Ellin514] Length = 264 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY LL+ V++ G + DRTG GT + FG Q RF L+ GFP++TTKK+H KS+++ELL Sbjct: 1 MIQYHQLLKLVLEQGKFKPDRTGTGTYAVFGAQARFPLADGFPVVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL+ +GV+IWDEWAD +G LG +YG QW W DG I+QI ++ ++ Sbjct: 61 WFLRGDTNVKYLNENGVTIWDEWADTEGNLGRVYGAQWCDWRTADGRSINQIDEVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRRHIVSAWNV I++MALPPCH LFQF+V +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KTPDSRRHIVSAWNVGEIERMALPPCHALFQFFVQDGELSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G F+HT GD+HLY+NH EQA LQLSR P+ LPQM +NP I ++ Sbjct: 181 YALLTMMVAQVCDLKPGTFVHTFGDLHLYSNHLEQAKLQLSREPKQLPQMKLNPAIKNIH 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y+PH I A ++V Sbjct: 241 EFKFEDFQLAGYDPHPGIKAPIAV 264 >gi|85059955|ref|YP_455657.1| thymidylate synthase [Sodalis glossinidius str. 'morsitans'] gi|123738935|sp|Q2NRH3|TYSY_SODGM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|84780475|dbj|BAE75252.1| thymidylate synthase [Sodalis glossinidius str. 'morsitans'] Length = 264 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V G+ + DRTG GT S FG+QMRFDL +GF L+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMRRVRAQGTPKADRTGTGTLSIFGHQMRFDLRQGFLLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL ++ VSIWDEWAD +G+LGP+YG QWR+W DG IDQ++ +V+ L+ Sbjct: 61 WFLNGDTNIAYLQQNNVSIWDEWADDNGDLGPVYGRQWRAWGTSDGRQIDQLAEVVRQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH LFQFYV NG LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHALFQFYVANGTLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MLA Q G+F+ T GD HLY+NH +QADLQL+R P LPQ++I L Sbjct: 181 YALLVHMLAQQCDLQVGDFVWTGGDTHLYSNHLQQADLQLTRDPLPLPQLLIKRRPATLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF L Y+PH AI A V+V Sbjct: 241 DYRFEDFELTGYDPHPAIKAPVAV 264 >gi|157148372|ref|YP_001455691.1| thymidylate synthase [Citrobacter koseri ATCC BAA-895] gi|166231695|sp|A8AP42|TYSY_CITK8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157085577|gb|ABV15255.1| hypothetical protein CKO_04194 [Citrobacter koseri ATCC BAA-895] Length = 264 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLREGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + V+IWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVTIWDEWADENGNLGPVYGKQWRAWPAPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|83858879|ref|ZP_00952401.1| thymidylate synthase [Oceanicaulis alexandrii HTCC2633] gi|83853702|gb|EAP91554.1| thymidylate synthase [Oceanicaulis alexandrii HTCC2633] Length = 279 Score = 345 bits (884), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 156/261 (59%), Positives = 195/261 (74%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL +++ G D+ DRTG GTR FG Q+R DLS GFPLLTTKKVH+KS+ ELLWF+ Sbjct: 19 YLDLLHEIMETGEDQTDRTGTGTRGVFGRQIRCDLSDGFPLLTTKKVHFKSIAVELLWFI 78 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G +NV +L GVSIWDEWAD++GELGP+YG QWR W DG IDQ++ +++ +R P Sbjct: 79 KGITNVKWLQERGVSIWDEWADENGELGPVYGKQWRRWEGPDGREIDQLAGLIEQIRQSP 138 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHI+SAWN A + MALPPCH LFQF V G+L QLYQRS D+FLG+PFNIASY+L Sbjct: 139 DSRRHIISAWNPADVPSMALPPCHTLFQFKVLGGRLHLQLYQRSADMFLGVPFNIASYAL 198 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 L M+A G++ GE++HT GD H+Y+NHF+Q QLSR PR LP + +NP I DL +F Sbjct: 199 LLAMVAQATGYEPGEYVHTFGDAHIYSNHFDQVREQLSRDPRPLPTLKLNPEITDLFAFE 258 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED TL Y+PHA I A V+V Sbjct: 259 YEDITLEGYDPHARISAPVAV 279 >gi|323978558|gb|EGB73640.1| thymidylate synthase [Escherichia coli TW10509] Length = 264 Score = 345 bits (884), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q +LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTNLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|220920733|ref|YP_002496034.1| thymidylate synthase [Methylobacterium nodulans ORS 2060] gi|254790243|sp|B8IF20|TYSY_METNO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219945339|gb|ACL55731.1| thymidylate synthase [Methylobacterium nodulans ORS 2060] Length = 264 Score = 345 bits (884), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLR ++ G + DRTG GT S FG+QMRFDL++GFPL+TTK++H KS++HELL Sbjct: 1 MRAYHDLLRRILDDGVAKHDRTGTGTLSVFGHQMRFDLAEGFPLVTTKRLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL +GV+IWDEWAD+ G+LGP+YG QWRSW DG +DQI+ ++ +R Sbjct: 61 WFLAGDTNVAYLQSNGVTIWDEWADEHGDLGPVYGRQWRSWAKPDGGSVDQIAWVLDEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWN A +D+MAL PCHCLFQFY+ +LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNPADLDRMALAPCHCLFQFYIAERRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V+ + G+F+HTLGD HLY+NH QA QL+R R LP++ +NP + L Sbjct: 181 YALLTAMMAHVLDLEPGDFVHTLGDAHLYSNHVAQARQQLARDERPLPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRY+D + Y+PH AI A V+V Sbjct: 241 DFRYDDVVIEGYDPHPAIRAPVAV 264 >gi|145297746|ref|YP_001140587.1| thymidylate synthase [Aeromonas salmonicida subsp. salmonicida A449] gi|166231686|sp|A4SIW7|TYSY_AERS4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|142850518|gb|ABO88839.1| thymidylate synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 264 Score = 345 bits (884), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 158/264 (59%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL Sbjct: 1 MRVYLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL GVSIWDEWAD++G+LGP+YG QWRSWP DG VIDQI V ++ Sbjct: 61 WFLNGDTNTAYLKEQGVSIWDEWADENGDLGPVYGAQWRSWPAADGAVIDQIQRAVDDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+F+ T GDVHLY+NH EQ LQLSR PR LPQ+ I + Sbjct: 181 YALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLSREPRPLPQLAIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEILGYDPHPGIKAPVAI 264 >gi|188534879|ref|YP_001908676.1| thymidylate synthase [Erwinia tasmaniensis Et1/99] gi|188029921|emb|CAO97805.1| Thymidylate synthase [Erwinia tasmaniensis Et1/99] Length = 264 Score = 344 bits (883), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLALMQHVLEQGTPKDDRTGTGTLSVFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL + VSIWDEWAD++G+LGP+YG QWRSW DG+ IDQ+S +++ L+ Sbjct: 61 WFLKGETNIAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGAADGHQIDQLSKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +D+MAL PCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL R PR LP+++I L Sbjct: 181 YALLVHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH AI A V++ Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAI 264 >gi|238751480|ref|ZP_04612972.1| Thymidylate synthase [Yersinia rohdei ATCC 43380] gi|238710347|gb|EEQ02573.1| Thymidylate synthase [Yersinia rohdei ATCC 43380] Length = 264 Score = 344 bits (883), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S++VQ L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A +++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPIAI 264 >gi|157372056|ref|YP_001480045.1| thymidylate synthase [Serratia proteamaculans 568] gi|166991231|sp|A8GIH7|TYSY_SERP5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157323820|gb|ABV42917.1| Thymidylate synthase [Serratia proteamaculans 568] Length = 264 Score = 344 bits (883), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMNKVLAEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL + VSIWDEWAD++G LGP+YG QWR+W DG IDQ+++++ L+ Sbjct: 61 WFLNGDTNVAYLKENKVSIWDEWADENGNLGPVYGKQWRAWGTADGRQIDQLTTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTQLQLTREPRALPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|269138061|ref|YP_003294761.1| thymidylate synthase [Edwardsiella tarda EIB202] gi|267983721|gb|ACY83550.1| thymidylate synthase [Edwardsiella tarda EIB202] gi|304558105|gb|ADM40769.1| Thymidylate synthase [Edwardsiella tarda FL6-60] Length = 264 Score = 344 bits (883), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMRKVLAEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++NV YLH + V+IWDEWAD++G+LGP+YG QWR+W DG +DQI +++ LR Sbjct: 61 WFLNGETNVKYLHENNVTIWDEWADENGDLGPVYGKQWRAWGCADGRQVDQIRQVMEQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + Q G+F+ T GD HLY+NH EQ LQL+R PR LP++++ + Sbjct: 181 YALLVHMMAQQLDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRALPRLVLARRPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V+V Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAV 264 >gi|332160563|ref|YP_004297140.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606963|emb|CBY28461.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664793|gb|ADZ41437.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 264 Score = 344 bits (883), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S +VQ L+ Sbjct: 61 WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A +++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264 >gi|283835406|ref|ZP_06355147.1| thymidylate synthase [Citrobacter youngae ATCC 29220] gi|291068577|gb|EFE06686.1| thymidylate synthase [Citrobacter youngae ATCC 29220] Length = 264 Score = 344 bits (883), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH +Q LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|228471682|ref|ZP_04056455.1| thymidylate synthase [Capnocytophaga gingivalis ATCC 33624] gi|228276835|gb|EEK15530.1| thymidylate synthase [Capnocytophaga gingivalis ATCC 33624] Length = 274 Score = 344 bits (883), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 157/277 (56%), Positives = 200/277 (72%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL H++ +G + DRTG GT S FGYQ+R +L +GFPLLTTKK+H KSV++ELL Sbjct: 1 MQAYKDLLNHILTYGHSKDDRTGTGTISVFGYQLRHNLQEGFPLLTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL HGV IW+EWAD+ G+LGP+YG QWR+W +G IDQI+ ++ +L+ Sbjct: 61 WFLRGDTNIHYLTEHGVRIWNEWADEQGDLGPVYGAQWRNW---NGEGIDQITEVLHTLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ +K ALPPCH LFQFYV G+LSCQLYQRS Sbjct: 118 TNPDSRRMVVSAWNPSVMPDTSLSFAENVANNKAALPPCHALFQFYVMEGRLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASY+LLT M+A V G Q G+F+H+ GD+H+Y NH EQ LQLSR PR L Sbjct: 178 ADAFLGVPFNIASYALLTQMMAHVTGLQVGDFVHSFGDLHIYKNHLEQVKLQLSREPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +N + DL +F Y DF L Y+P+ I KVSV Sbjct: 238 PTMKLNEKVTDLFAFDYSDFILEGYDPYPTIKGKVSV 274 >gi|238764009|ref|ZP_04624965.1| Thymidylate synthase [Yersinia kristensenii ATCC 33638] gi|238697826|gb|EEP90587.1| Thymidylate synthase [Yersinia kristensenii ATCC 33638] Length = 264 Score = 344 bits (882), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S +VQ L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q +LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHIDQTNLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A +++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264 >gi|292487189|ref|YP_003530061.1| thymidylate synthetase [Erwinia amylovora CFBP1430] gi|292900435|ref|YP_003539804.1| thymidylate synthase [Erwinia amylovora ATCC 49946] gi|291200283|emb|CBJ47411.1| thymidylate synthase [Erwinia amylovora ATCC 49946] gi|291552608|emb|CBA19653.1| thymidylate synthetase [Erwinia amylovora CFBP1430] gi|312171289|emb|CBX79548.1| thymidylate synthetase [Erwinia amylovora ATCC BAA-2158] Length = 264 Score = 344 bits (882), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLALMQHVLEQGAPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+S +++ L+ Sbjct: 61 WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +D+MAL PCH LFQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SDPDSRRMIVSAWNVGELDQMALAPCHALFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL R P LP+++I L Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPHALPKLLIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH AI A V+V Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAV 264 >gi|303257367|ref|ZP_07343381.1| thymidylate synthase [Burkholderiales bacterium 1_1_47] gi|302860858|gb|EFL83935.1| thymidylate synthase [Burkholderiales bacterium 1_1_47] Length = 267 Score = 344 bits (882), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 160/262 (61%), Positives = 196/262 (74%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +R V + G ++ DRTGVGTRS FGYQMRF+L +GFPL+TTKK+H +S++HELLWF Sbjct: 6 QYETFMRDVFEHGVEKSDRTGVGTRSMFGYQMRFNLQEGFPLVTTKKLHLRSIIHELLWF 65 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L GDSNV YLH + V+IWDEWAD +G+LGPIYGVQWR W DG IDQIS+++ ++ + Sbjct: 66 LHGDSNVKYLHDNKVTIWDEWADANGDLGPIYGVQWRHWKTSDGGYIDQISNLIHQIKTN 125 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNV IDKMALPPCH FQFYV GKLSCQLYQRS D+FLG+PFNIASYS Sbjct: 126 PDSRRLVVSAWNVGEIDKMALPPCHMFFQFYVAQGKLSCQLYQRSCDIFLGVPFNIASYS 185 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G+FI T GD H+YNNHFEQ LQLSR PR P++II + + Sbjct: 186 LLTHMIAQQCDLDVGDFIWTGGDCHIYNNHFEQVKLQLSREPRPYPKLIIKRRPDSIFDY 245 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 +EDF + Y+P AI A ++V Sbjct: 246 NFEDFEIVDYDPWPAIKAPIAV 267 >gi|309781084|ref|ZP_07675822.1| thymidylate synthase [Ralstonia sp. 5_7_47FAA] gi|308920150|gb|EFP65809.1| thymidylate synthase [Ralstonia sp. 5_7_47FAA] Length = 264 Score = 343 bits (881), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L GFPL+TTKKVH KS+V+ELL Sbjct: 1 MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGP+YG QWRSWP +G IDQI+ ++ ++ Sbjct: 61 WFLQGATNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G G+F+ T GD HLYNNHFEQ QL+R P LP++ I + Sbjct: 181 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVQTQLAREPLPLPKLHIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H AI A V+V Sbjct: 241 DYQYEDFEIVGYQSHPAIKAPVAV 264 >gi|290476668|ref|YP_003469573.1| thymidylate synthetase [Xenorhabdus bovienii SS-2004] gi|289176006|emb|CBJ82809.1| thymidylate synthetase [Xenorhabdus bovienii SS-2004] Length = 264 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEDGTAKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ++ +++ L+ Sbjct: 61 WFLNGDTNTQYLRDNNVTIWDEWADENGDLGPVYGKQWRAWSSADGRQIDQLAKVLEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +DKMAL PCH FQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAEGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MLA + G+F+ T GD HLY+NH EQ LQLSR PRTLP++II L Sbjct: 181 YALLVHMLAQQCDLEVGDFVWTGGDTHLYSNHLEQTKLQLSREPRTLPKLIIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIVDYDPHPGIKAPVAI 264 >gi|270264851|ref|ZP_06193115.1| thymidylate synthetase [Serratia odorifera 4Rx13] gi|270041149|gb|EFA14249.1| thymidylate synthetase [Serratia odorifera 4Rx13] Length = 264 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMNKVLAEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL + VSIWDEWAD+ G+LGP+YG QWR+W DG IDQ+S++++ L+ Sbjct: 61 WFLNGDTNVAYLRENNVSIWDEWADEHGDLGPVYGKQWRAWGAADGRQIDQLSNVLKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTRLQLTREPRALPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|333000932|gb|EGK20502.1| thymidylate synthase [Shigella flexneri K-272] gi|333015566|gb|EGK34905.1| thymidylate synthase [Shigella flexneri K-227] Length = 264 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YTLLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|254821236|ref|ZP_05226237.1| thymidylate synthase [Mycobacterium intracellulare ATCC 13950] Length = 266 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 164/261 (62%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG Q+R+DLS GFPLLTTKKVH KSVV+ELLWFL Sbjct: 7 YEDLLRLVLDEGTAKSDRTGTGTRSLFGRQLRYDLSAGFPLLTTKKVHLKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV++LH HGV+IWDEWA G+LGPIYGVQWRSWP G +DQIS+ + LR DP Sbjct: 67 RGDSNVAWLHEHGVTIWDEWASDAGDLGPIYGVQWRSWPTPTGEHVDQISAALDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 NSRRIIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ LQLSR PR P++++ + + Sbjct: 187 LTHMMAAQSGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELVLGERD-SIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y D +R+Y+PH AI A V+V Sbjct: 246 YGDVVVRNYDPHPAIKAPVAV 266 >gi|882719|gb|AAB40474.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655] Length = 264 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVXDGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|330999206|ref|ZP_08322924.1| thymidylate synthase [Parasutterella excrementihominis YIT 11859] gi|329575272|gb|EGG56820.1| thymidylate synthase [Parasutterella excrementihominis YIT 11859] Length = 267 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 159/262 (60%), Positives = 196/262 (74%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +R V + G ++ DRTGVGTRS FGYQMRF+L +GFPL+TTKK+H +S++HELLWF Sbjct: 6 QYETFMRDVFEHGVEKSDRTGVGTRSMFGYQMRFNLQEGFPLVTTKKLHLRSIIHELLWF 65 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L GDSN+ YLH + V+IWDEWAD +G+LGPIYGVQWR W DG IDQIS+++ ++ + Sbjct: 66 LHGDSNIKYLHDNKVTIWDEWADANGDLGPIYGVQWRHWKTSDGGYIDQISNLIHQIKTN 125 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNV IDKMALPPCH FQFYV GKLSCQLYQRS D+FLG+PFNIASYS Sbjct: 126 PDSRRLVVSAWNVGEIDKMALPPCHMFFQFYVAQGKLSCQLYQRSCDIFLGVPFNIASYS 185 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G+FI T GD H+YNNHFEQ LQLSR PR P++II + + Sbjct: 186 LLTHMIAQQCDLDVGDFIWTGGDCHIYNNHFEQVKLQLSREPRPYPKLIIKRRPDSIFDY 245 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 +EDF + Y+P AI A ++V Sbjct: 246 NFEDFEIVDYDPWPAIKAPIAV 267 >gi|238787265|ref|ZP_04631064.1| Thymidylate synthase [Yersinia frederiksenii ATCC 33641] gi|238724527|gb|EEQ16168.1| Thymidylate synthase [Yersinia frederiksenii ATCC 33641] Length = 264 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLAEGTAKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S++VQ L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVAEGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLIHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTQLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A +++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264 >gi|221066060|ref|ZP_03542165.1| Thymidylate synthase [Comamonas testosteroni KF-1] gi|220711083|gb|EED66451.1| Thymidylate synthase [Comamonas testosteroni KF-1] Length = 276 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF Sbjct: 14 QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 LRGDSNV +L G +IWDEWADK G+LGP+YGVQWRSWP DG +DQI+ +V+ L++ Sbjct: 74 LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLQS 133 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR IVSAWNVA +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY Sbjct: 134 NPDSRRIIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 193 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA G + G+FI T GD H+YNNHFEQ QLSR P P + I + Sbjct: 194 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPDSIFG 253 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + YEDF + Y+ HA I A V+V Sbjct: 254 YEYEDFEVLDYQHHAGIKAPVAV 276 >gi|16766303|ref|NP_461918.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414948|ref|YP_152023.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181510|ref|YP_217927.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615936|ref|YP_001589901.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550126|ref|ZP_02343883.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993498|ref|ZP_02574592.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231096|ref|ZP_02656154.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236052|ref|ZP_02661110.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242768|ref|ZP_02667700.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168463843|ref|ZP_02697760.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820273|ref|ZP_02832273.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444087|ref|YP_002042250.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448836|ref|YP_002046971.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469951|ref|ZP_03075935.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735179|ref|YP_002115951.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248114|ref|YP_002147910.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197261701|ref|ZP_03161775.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363876|ref|YP_002143513.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243101|ref|YP_002216974.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204928268|ref|ZP_03219468.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353941|ref|YP_002227742.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858264|ref|YP_002244915.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238909779|ref|ZP_04653616.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|20455351|sp|Q8ZMA9|TYSY_SALTY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901208|sp|Q5PEN6|TYSY_SALPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|75505581|sp|Q57KB6|TYSY_SALCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036942|sp|A9N2L7|TYSY_SALPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|16421551|gb|AAL21877.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56129205|gb|AAV78711.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129143|gb|AAX66846.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365300|gb|ABX69068.1| hypothetical protein SPAB_03733 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402750|gb|ACF62972.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407140|gb|ACF67359.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456315|gb|EDX45154.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710681|gb|ACF89902.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633626|gb|EDX52040.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095353|emb|CAR60911.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211817|gb|ACH49214.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197239956|gb|EDY22576.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290918|gb|EDY30272.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937617|gb|ACH74950.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204322590|gb|EDZ07787.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273722|emb|CAR38715.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324734|gb|EDZ12573.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328467|gb|EDZ15231.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334514|gb|EDZ21278.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338222|gb|EDZ24986.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342942|gb|EDZ29706.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206710067|emb|CAR34422.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248135|emb|CBG25970.1| TS [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995141|gb|ACY90026.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159559|emb|CBW19078.1| Thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914020|dbj|BAJ37994.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087427|emb|CBY97192.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225677|gb|EFX50731.1| Thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613402|gb|EFY10343.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620994|gb|EFY17852.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624057|gb|EFY20891.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628203|gb|EFY24992.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633322|gb|EFY30064.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636100|gb|EFY32808.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322648813|gb|EFY45260.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655194|gb|EFY51504.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657975|gb|EFY54243.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664077|gb|EFY60276.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667045|gb|EFY63217.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673095|gb|EFY69202.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677915|gb|EFY73978.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681090|gb|EFY77123.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685686|gb|EFY81680.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715992|gb|EFZ07563.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131357|gb|ADX18787.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194825|gb|EFZ80012.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196576|gb|EFZ81724.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323205011|gb|EFZ89994.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207788|gb|EFZ92734.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212660|gb|EFZ97477.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214857|gb|EFZ99605.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323230655|gb|EGA14773.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234995|gb|EGA19081.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239033|gb|EGA23083.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244609|gb|EGA28615.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247224|gb|EGA31190.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323256400|gb|EGA40136.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262424|gb|EGA45980.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267480|gb|EGA50964.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269116|gb|EGA52571.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624741|gb|EGE31086.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629055|gb|EGE35398.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332989869|gb|AEF08852.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 264 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|1065359|pdb|1TLC|A Chain A, Thymidylate Synthase Complexed With Dgmp And Folate Analog 1843u89 gi|1065360|pdb|1TLC|B Chain B, Thymidylate Synthase Complexed With Dgmp And Folate Analog 1843u89 gi|1310775|pdb|1TSD|A Chain A, Thymidylate Synthase Complex With 2'-Deoxyuridine 5'- Monophosphate (Dump) And Folate Analog 1843u89 gi|1310776|pdb|1TSD|B Chain B, Thymidylate Synthase Complex With 2'-Deoxyuridine 5'- Monophosphate (Dump) And Folate Analog 1843u89 gi|3318670|pdb|1DDU|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717 And 2', 5'-Dideoxyuridine (Ddurd) gi|3318671|pdb|1DDU|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717 And 2', 5'-Dideoxyuridine (Ddurd) gi|3318685|pdb|1TDU|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717 And 2'- Deoxyuridine (Durd) gi|3318686|pdb|1TDU|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717 And 2'- Deoxyuridine (Durd) gi|3318724|pdb|1AN5|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717 gi|3318725|pdb|1AN5|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717 gi|3891613|pdb|1AXW|A Chain A, E. Coli Thymidylate Synthase In Complex With Methotrexate (Mtx) And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|3891614|pdb|1AXW|B Chain B, E. Coli Thymidylate Synthase In Complex With Methotrexate (Mtx) And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|157829994|pdb|1AOB|A Chain A, E. Coli Thymidylate Synthase Complexed With Ddurd gi|157830243|pdb|1BDU|A Chain A, E. Coli Thymidylate Synthase Complexed With Durd gi|157830328|pdb|1BID|A Chain A, E. Coli Thymidylate Synthase Complexed With Dump gi|157833963|pdb|1TJS|A Chain A, E. Coli Thymidylate Synthase gi|157834008|pdb|1TRG|A Chain A, E. Coli Thymidylate Synthase In Symmetric Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|157880165|pdb|1SYN|A Chain A, E. Coli Thymidylate Synthase In Complex With Bw1843u89 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|157880166|pdb|1SYN|B Chain B, E. Coli Thymidylate Synthase In Complex With Bw1843u89 And 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 265 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 2 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 122 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 181 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 241 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 DYRFEDFEIEGYDPHPGIKAPVAI 265 >gi|15803346|ref|NP_289379.1| thymidylate synthase [Escherichia coli O157:H7 EDL933] gi|15832938|ref|NP_311711.1| thymidylate synthase [Escherichia coli O157:H7 str. Sakai] gi|16130731|ref|NP_417304.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655] gi|26249257|ref|NP_755297.1| thymidylate synthase [Escherichia coli CFT073] gi|74313395|ref|YP_311814.1| thymidylate synthase [Shigella sonnei Ss046] gi|89109610|ref|AP_003390.1| thymidylate synthetase [Escherichia coli str. K-12 substr. W3110] gi|91212223|ref|YP_542209.1| thymidylate synthase [Escherichia coli UTI89] gi|110642995|ref|YP_670725.1| thymidylate synthase [Escherichia coli 536] gi|117625080|ref|YP_854068.1| thymidylate synthase [Escherichia coli APEC O1] gi|157156066|ref|YP_001464162.1| thymidylate synthase [Escherichia coli E24377A] gi|168751042|ref|ZP_02776064.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4113] gi|168758211|ref|ZP_02783218.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4401] gi|168764657|ref|ZP_02789664.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4501] gi|168766799|ref|ZP_02791806.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4486] gi|168777651|ref|ZP_02802658.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4196] gi|168778820|ref|ZP_02803827.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4076] gi|168788090|ref|ZP_02813097.1| thymidylate synthase [Escherichia coli O157:H7 str. EC869] gi|168801690|ref|ZP_02826697.1| thymidylate synthase [Escherichia coli O157:H7 str. EC508] gi|170082395|ref|YP_001731715.1| thymidylate synthetase [Escherichia coli str. K-12 substr. DH10B] gi|170684262|ref|YP_001744995.1| thymidylate synthase [Escherichia coli SMS-3-5] gi|170765924|ref|ZP_02900735.1| thymidylate synthase [Escherichia albertii TW07627] gi|188494993|ref|ZP_03002263.1| thymidylate synthase [Escherichia coli 53638] gi|191168602|ref|ZP_03030385.1| thymidylate synthase [Escherichia coli B7A] gi|191171260|ref|ZP_03032810.1| thymidylate synthase [Escherichia coli F11] gi|193065099|ref|ZP_03046173.1| thymidylate synthase [Escherichia coli E22] gi|193071410|ref|ZP_03052325.1| thymidylate synthase [Escherichia coli E110019] gi|194426405|ref|ZP_03058960.1| thymidylate synthase [Escherichia coli B171] gi|194434328|ref|ZP_03066592.1| thymidylate synthase [Shigella dysenteriae 1012] gi|195936429|ref|ZP_03081811.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4024] gi|208806510|ref|ZP_03248847.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4206] gi|208814146|ref|ZP_03255475.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4045] gi|208818648|ref|ZP_03258968.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4042] gi|209400848|ref|YP_002272290.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4115] gi|209920275|ref|YP_002294359.1| thymidylate synthase [Escherichia coli SE11] gi|215488145|ref|YP_002330576.1| thymidylate synthase [Escherichia coli O127:H6 str. E2348/69] gi|217327216|ref|ZP_03443299.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14588] gi|218555376|ref|YP_002388289.1| thymidylate synthase [Escherichia coli IAI1] gi|218559839|ref|YP_002392752.1| thymidylate synthase [Escherichia coli S88] gi|218690953|ref|YP_002399165.1| thymidylate synthase [Escherichia coli ED1a] gi|218696423|ref|YP_002404090.1| thymidylate synthase [Escherichia coli 55989] gi|218701541|ref|YP_002409170.1| thymidylate synthase [Escherichia coli IAI39] gi|218706321|ref|YP_002413840.1| thymidylate synthase [Escherichia coli UMN026] gi|227888391|ref|ZP_04006196.1| thymidylate synthase [Escherichia coli 83972] gi|237706513|ref|ZP_04536994.1| thymidylate synthetase [Escherichia sp. 3_2_53FAA] gi|238901962|ref|YP_002927758.1| thymidylate synthetase [Escherichia coli BW2952] gi|254037878|ref|ZP_04871936.1| thymidylate synthetase [Escherichia sp. 1_1_43] gi|254794765|ref|YP_003079602.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14359] gi|256024671|ref|ZP_05438536.1| thymidylate synthase [Escherichia sp. 4_1_40B] gi|260845489|ref|YP_003223267.1| thymidylate synthetase ThyA [Escherichia coli O103:H2 str. 12009] gi|260856939|ref|YP_003230830.1| thymidylate synthetase ThyA [Escherichia coli O26:H11 str. 11368] gi|260869506|ref|YP_003235908.1| thymidylate synthetase ThyA [Escherichia coli O111:H- str. 11128] gi|261226126|ref|ZP_05940407.1| thymidylate synthetase [Escherichia coli O157:H7 str. FRIK2000] gi|261256618|ref|ZP_05949151.1| thymidylate synthetase ThyA [Escherichia coli O157:H7 str. FRIK966] gi|291284153|ref|YP_003500971.1| Thymidylate synthase [Escherichia coli O55:H7 str. CB9615] gi|293406316|ref|ZP_06650242.1| thymidylate synthase [Escherichia coli FVEC1412] gi|293412172|ref|ZP_06654895.1| thymidylate synthase [Escherichia coli B354] gi|293416071|ref|ZP_06658711.1| thymidylate synthase [Escherichia coli B185] gi|293449151|ref|ZP_06663572.1| thymidylate synthase [Escherichia coli B088] gi|298382052|ref|ZP_06991649.1| thyA [Escherichia coli FVEC1302] gi|300815754|ref|ZP_07095978.1| thymidylate synthase [Escherichia coli MS 107-1] gi|300820616|ref|ZP_07100767.1| thymidylate synthase [Escherichia coli MS 119-7] gi|300898112|ref|ZP_07116478.1| thymidylate synthase [Escherichia coli MS 198-1] gi|300906645|ref|ZP_07124334.1| thymidylate synthase [Escherichia coli MS 84-1] gi|300920317|ref|ZP_07136755.1| thymidylate synthase [Escherichia coli MS 115-1] gi|300923189|ref|ZP_07139244.1| thymidylate synthase [Escherichia coli MS 182-1] gi|300936248|ref|ZP_07151181.1| thymidylate synthase [Escherichia coli MS 21-1] gi|300950561|ref|ZP_07164468.1| thymidylate synthase [Escherichia coli MS 116-1] gi|300958146|ref|ZP_07170303.1| thymidylate synthase [Escherichia coli MS 175-1] gi|300980528|ref|ZP_07175054.1| thymidylate synthase [Escherichia coli MS 45-1] gi|300995837|ref|ZP_07181269.1| thymidylate synthase [Escherichia coli MS 200-1] gi|301026203|ref|ZP_07189669.1| thymidylate synthase [Escherichia coli MS 196-1] gi|301027499|ref|ZP_07190836.1| thymidylate synthase [Escherichia coli MS 69-1] gi|301049380|ref|ZP_07196344.1| thymidylate synthase [Escherichia coli MS 185-1] gi|301302964|ref|ZP_07209091.1| thymidylate synthase [Escherichia coli MS 124-1] gi|301326156|ref|ZP_07219542.1| thymidylate synthase [Escherichia coli MS 78-1] gi|301645205|ref|ZP_07245158.1| thymidylate synthase [Escherichia coli MS 146-1] gi|306812269|ref|ZP_07446467.1| thymidylate synthase [Escherichia coli NC101] gi|307139511|ref|ZP_07498867.1| thymidylate synthase [Escherichia coli H736] gi|307310563|ref|ZP_07590211.1| thymidylate synthase [Escherichia coli W] gi|309793875|ref|ZP_07688300.1| thymidylate synthase [Escherichia coli MS 145-7] gi|331643512|ref|ZP_08344643.1| thymidylate synthase [Escherichia coli H736] gi|331648587|ref|ZP_08349675.1| thymidylate synthase [Escherichia coli M605] gi|331658975|ref|ZP_08359917.1| thymidylate synthase [Escherichia coli TA206] gi|331664389|ref|ZP_08365295.1| thymidylate synthase [Escherichia coli TA143] gi|331669559|ref|ZP_08370405.1| thymidylate synthase [Escherichia coli TA271] gi|331674312|ref|ZP_08375072.1| thymidylate synthase [Escherichia coli TA280] gi|331678805|ref|ZP_08379479.1| thymidylate synthase [Escherichia coli H591] gi|331684470|ref|ZP_08385062.1| thymidylate synthase [Escherichia coli H299] gi|67474758|sp|P0A884|TYSY_ECOLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|67474759|sp|P0A885|TYSY_ECOL6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|67474760|sp|P0A886|TYSY_ECO57 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123048907|sp|Q0TE05|TYSY_ECOL5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123266005|sp|Q1R7I6|TYSY_ECOUT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123759566|sp|Q3YY33|TYSY_SHISS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231697|sp|A1AF39|TYSY_ECOK1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166991228|sp|A7ZQT3|TYSY_ECO24 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713166|sp|B7MLH3|TYSY_ECO45 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713167|sp|B7NVX2|TYSY_ECO7I RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713168|sp|B7LY83|TYSY_ECO8A RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713169|sp|B7N759|TYSY_ECOLU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790236|sp|B7UHP4|TYSY_ECO27 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790237|sp|B7LF04|TYSY_ECO55 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790238|sp|B7MZC6|TYSY_ECO81 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|259550774|sp|C4ZZX9|TYSY_ECOBW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|494741|pdb|2BBQ|A Chain A, Structural Basis For Recognition Of Polyglutamyl Folates By Thymidylate Synthase gi|494742|pdb|2BBQ|B Chain B, Structural Basis For Recognition Of Polyglutamyl Folates By Thymidylate Synthase gi|2781311|pdb|2KCE|A Chain A, Binding Of The Anticancer Drug Zd1694 To E. Coli Thymidylate Synthase: Assessing Specificity And Affinity gi|2781312|pdb|2KCE|B Chain B, Binding Of The Anticancer Drug Zd1694 To E. Coli Thymidylate Synthase: Assessing Specificity And Affinity gi|157836897|pdb|3TMS|A Chain A, Plastic Adaptation Toward Mutations In Proteins: Structural Comparison Of Thymidylate Synthases gi|12517312|gb|AAG57938.1|AE005511_6 thymidylate synthetase [Escherichia coli O157:H7 str. EDL933] gi|26109664|gb|AAN81867.1|AE016765_269 Thymidylate synthase [Escherichia coli CFT073] gi|147987|gb|AAA24675.1| thymidylate synthase [Escherichia coli] gi|1789191|gb|AAC75866.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655] gi|13363156|dbj|BAB37107.1| thymidylate synthetase [Escherichia coli O157:H7 str. Sakai] gi|73856872|gb|AAZ89579.1| thymidylate synthetase [Shigella sonnei Ss046] gi|85675643|dbj|BAE76896.1| thymidylate synthetase [Escherichia coli str. K12 substr. W3110] gi|91073797|gb|ABE08678.1| thymidylate synthetase [Escherichia coli UTI89] gi|110344587|gb|ABG70824.1| thymidylate synthase [Escherichia coli 536] gi|115514204|gb|ABJ02279.1| thymidylate synthetase [Escherichia coli APEC O1] gi|157078096|gb|ABV17804.1| thymidylate synthase [Escherichia coli E24377A] gi|169890230|gb|ACB03937.1| thymidylate synthetase [Escherichia coli str. K-12 substr. DH10B] gi|170125070|gb|EDS94001.1| thymidylate synthase [Escherichia albertii TW07627] gi|170521980|gb|ACB20158.1| thymidylate synthase [Escherichia coli SMS-3-5] gi|187767149|gb|EDU30993.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4196] gi|188014880|gb|EDU53002.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4113] gi|188490192|gb|EDU65295.1| thymidylate synthase [Escherichia coli 53638] gi|189003343|gb|EDU72329.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4076] gi|189354949|gb|EDU73368.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4401] gi|189363818|gb|EDU82237.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4486] gi|189365398|gb|EDU83814.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4501] gi|189372183|gb|EDU90599.1| thymidylate synthase [Escherichia coli O157:H7 str. EC869] gi|189376199|gb|EDU94615.1| thymidylate synthase [Escherichia coli O157:H7 str. EC508] gi|190901348|gb|EDV61114.1| thymidylate synthase [Escherichia coli B7A] gi|190908560|gb|EDV68149.1| thymidylate synthase [Escherichia coli F11] gi|192927230|gb|EDV81850.1| thymidylate synthase [Escherichia coli E22] gi|192955272|gb|EDV85760.1| thymidylate synthase [Escherichia coli E110019] gi|194415713|gb|EDX31980.1| thymidylate synthase [Escherichia coli B171] gi|194417391|gb|EDX33496.1| thymidylate synthase [Shigella dysenteriae 1012] gi|208726311|gb|EDZ75912.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4206] gi|208735423|gb|EDZ84110.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4045] gi|208738771|gb|EDZ86453.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4042] gi|209162248|gb|ACI39681.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4115] gi|209761050|gb|ACI78837.1| thymidylate synthetase [Escherichia coli] gi|209761052|gb|ACI78838.1| thymidylate synthetase [Escherichia coli] gi|209761054|gb|ACI78839.1| thymidylate synthetase [Escherichia coli] gi|209761056|gb|ACI78840.1| thymidylate synthetase [Escherichia coli] gi|209913534|dbj|BAG78608.1| thymidylate synthase [Escherichia coli SE11] gi|215266217|emb|CAS10644.1| thymidylate synthetase [Escherichia coli O127:H6 str. E2348/69] gi|217319583|gb|EEC28008.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14588] gi|218353155|emb|CAU99013.1| thymidylate synthetase [Escherichia coli 55989] gi|218362144|emb|CAQ99753.1| thymidylate synthetase [Escherichia coli IAI1] gi|218366608|emb|CAR04362.1| thymidylate synthetase [Escherichia coli S88] gi|218371527|emb|CAR19365.1| thymidylate synthetase [Escherichia coli IAI39] gi|218428517|emb|CAR09443.2| thymidylate synthetase [Escherichia coli ED1a] gi|218433418|emb|CAR14320.1| thymidylate synthetase [Escherichia coli UMN026] gi|222034541|emb|CAP77283.1| Thymidylate synthase [Escherichia coli LF82] gi|226839502|gb|EEH71523.1| thymidylate synthetase [Escherichia sp. 1_1_43] gi|226899553|gb|EEH85812.1| thymidylate synthetase [Escherichia sp. 3_2_53FAA] gi|227834660|gb|EEJ45126.1| thymidylate synthase [Escherichia coli 83972] gi|238863661|gb|ACR65659.1| thymidylate synthetase [Escherichia coli BW2952] gi|254594165|gb|ACT73526.1| thymidylate synthetase [Escherichia coli O157:H7 str. TW14359] gi|257755588|dbj|BAI27090.1| thymidylate synthetase ThyA [Escherichia coli O26:H11 str. 11368] gi|257760636|dbj|BAI32133.1| thymidylate synthetase ThyA [Escherichia coli O103:H2 str. 12009] gi|257765862|dbj|BAI37357.1| thymidylate synthetase ThyA [Escherichia coli O111:H- str. 11128] gi|260448125|gb|ACX38547.1| Thymidylate synthase [Escherichia coli DH1] gi|281179852|dbj|BAI56182.1| thymidylate synthetase [Escherichia coli SE15] gi|284922763|emb|CBG35851.1| thymidylate synthase [Escherichia coli 042] gi|290764026|gb|ADD57987.1| Thymidylate synthase [Escherichia coli O55:H7 str. CB9615] gi|291322241|gb|EFE61670.1| thymidylate synthase [Escherichia coli B088] gi|291426322|gb|EFE99354.1| thymidylate synthase [Escherichia coli FVEC1412] gi|291432260|gb|EFF05242.1| thymidylate synthase [Escherichia coli B185] gi|291468943|gb|EFF11434.1| thymidylate synthase [Escherichia coli B354] gi|294493395|gb|ADE92151.1| thymidylate synthase [Escherichia coli IHE3034] gi|298277192|gb|EFI18708.1| thyA [Escherichia coli FVEC1302] gi|299879795|gb|EFI88006.1| thymidylate synthase [Escherichia coli MS 196-1] gi|300298822|gb|EFJ55207.1| thymidylate synthase [Escherichia coli MS 185-1] gi|300304692|gb|EFJ59212.1| thymidylate synthase [Escherichia coli MS 200-1] gi|300315168|gb|EFJ64952.1| thymidylate synthase [Escherichia coli MS 175-1] gi|300358170|gb|EFJ74040.1| thymidylate synthase [Escherichia coli MS 198-1] gi|300395007|gb|EFJ78545.1| thymidylate synthase [Escherichia coli MS 69-1] gi|300401546|gb|EFJ85084.1| thymidylate synthase [Escherichia coli MS 84-1] gi|300409228|gb|EFJ92766.1| thymidylate synthase [Escherichia coli MS 45-1] gi|300412642|gb|EFJ95952.1| thymidylate synthase [Escherichia coli MS 115-1] gi|300420498|gb|EFK03809.1| thymidylate synthase [Escherichia coli MS 182-1] gi|300450129|gb|EFK13749.1| thymidylate synthase [Escherichia coli MS 116-1] gi|300458573|gb|EFK22066.1| thymidylate synthase [Escherichia coli MS 21-1] gi|300526880|gb|EFK47949.1| thymidylate synthase [Escherichia coli MS 119-7] gi|300531683|gb|EFK52745.1| thymidylate synthase [Escherichia coli MS 107-1] gi|300841628|gb|EFK69388.1| thymidylate synthase [Escherichia coli MS 124-1] gi|300847121|gb|EFK74881.1| thymidylate synthase [Escherichia coli MS 78-1] gi|301076475|gb|EFK91281.1| thymidylate synthase [Escherichia coli MS 146-1] gi|305854307|gb|EFM54745.1| thymidylate synthase [Escherichia coli NC101] gi|306909458|gb|EFN39953.1| thymidylate synthase [Escherichia coli W] gi|307554821|gb|ADN47596.1| thymidylate synthetase [Escherichia coli ABU 83972] gi|307625581|gb|ADN69885.1| thymidylate synthase [Escherichia coli UM146] gi|308122282|gb|EFO59544.1| thymidylate synthase [Escherichia coli MS 145-7] gi|309703182|emb|CBJ02516.1| thymidylate synthase [Escherichia coli ETEC H10407] gi|312947378|gb|ADR28205.1| thymidylate synthase [Escherichia coli O83:H1 str. NRG 857C] gi|315062133|gb|ADT76460.1| thymidylate synthetase [Escherichia coli W] gi|315137431|dbj|BAJ44590.1| thymidylate synthase [Escherichia coli DH1] gi|315256688|gb|EFU36656.1| thymidylate synthase [Escherichia coli MS 85-1] gi|315289384|gb|EFU48779.1| thymidylate synthase [Escherichia coli MS 110-3] gi|315293800|gb|EFU53152.1| thymidylate synthase [Escherichia coli MS 153-1] gi|315295782|gb|EFU55099.1| thymidylate synthase [Escherichia coli MS 16-3] gi|315615214|gb|EFU95851.1| thymidylate synthase [Escherichia coli 3431] gi|320176416|gb|EFW51470.1| Thymidylate synthase [Shigella dysenteriae CDC 74-1112] gi|320182266|gb|EFW57169.1| Thymidylate synthase [Shigella boydii ATCC 9905] gi|320189156|gb|EFW63815.1| Thymidylate synthase [Escherichia coli O157:H7 str. EC1212] gi|320194962|gb|EFW69591.1| Thymidylate synthase [Escherichia coli WV_060327] gi|320202466|gb|EFW77036.1| Thymidylate synthase [Escherichia coli EC4100B] gi|320640475|gb|EFX10014.1| thymidylate synthase [Escherichia coli O157:H7 str. G5101] gi|320656517|gb|EFX24413.1| thymidylate synthase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662036|gb|EFX29437.1| thymidylate synthase [Escherichia coli O55:H7 str. USDA 5905] gi|320667111|gb|EFX34074.1| thymidylate synthase [Escherichia coli O157:H7 str. LSU-61] gi|323154804|gb|EFZ40998.1| thymidylate synthase [Escherichia coli EPECa14] gi|323160030|gb|EFZ45994.1| thymidylate synthase [Escherichia coli E128010] gi|323172870|gb|EFZ58501.1| thymidylate synthase [Escherichia coli LT-68] gi|323180264|gb|EFZ65816.1| thymidylate synthase [Escherichia coli 1180] gi|323183371|gb|EFZ68768.1| thymidylate synthase [Escherichia coli 1357] gi|323188757|gb|EFZ74042.1| thymidylate synthase [Escherichia coli RN587/1] gi|323377287|gb|ADX49555.1| thymidylate synthase [Escherichia coli KO11] gi|323935814|gb|EGB32117.1| thymidylate synthase [Escherichia coli E1520] gi|323957433|gb|EGB53155.1| thymidylate synthase [Escherichia coli H263] gi|323966808|gb|EGB62239.1| thymidylate synthase [Escherichia coli M863] gi|324005631|gb|EGB74850.1| thymidylate synthase [Escherichia coli MS 57-2] gi|324011659|gb|EGB80878.1| thymidylate synthase [Escherichia coli MS 60-1] gi|324016318|gb|EGB85537.1| thymidylate synthase [Escherichia coli MS 117-3] gi|324119867|gb|EGC13746.1| thymidylate synthase [Escherichia coli E1167] gi|326339105|gb|EGD62920.1| Thymidylate synthase [Escherichia coli O157:H7 str. 1044] gi|326343013|gb|EGD66781.1| Thymidylate synthase [Escherichia coli O157:H7 str. 1125] gi|327251574|gb|EGE63260.1| thymidylate synthase [Escherichia coli STEC_7v] gi|330908879|gb|EGH37393.1| thymidylate synthase [Escherichia coli AA86] gi|331036983|gb|EGI09207.1| thymidylate synthase [Escherichia coli H736] gi|331042334|gb|EGI14476.1| thymidylate synthase [Escherichia coli M605] gi|331053557|gb|EGI25586.1| thymidylate synthase [Escherichia coli TA206] gi|331058320|gb|EGI30301.1| thymidylate synthase [Escherichia coli TA143] gi|331063227|gb|EGI35140.1| thymidylate synthase [Escherichia coli TA271] gi|331068406|gb|EGI39801.1| thymidylate synthase [Escherichia coli TA280] gi|331073635|gb|EGI44956.1| thymidylate synthase [Escherichia coli H591] gi|331078085|gb|EGI49291.1| thymidylate synthase [Escherichia coli H299] gi|332088662|gb|EGI93775.1| thymidylate synthase [Shigella dysenteriae 155-74] gi|332344717|gb|AEE58051.1| thymidylate synthase ThyA [Escherichia coli UMNK88] gi|332999582|gb|EGK19167.1| thymidylate synthase [Shigella flexneri VA-6] Length = 264 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|296171672|ref|ZP_06852886.1| thymidylate synthase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894033|gb|EFG73796.1| thymidylate synthase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 270 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 160/261 (61%), Positives = 200/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG+Q+R+DLS GFPLLTTKKVH KSVV+ELLWFL Sbjct: 11 YEDLLRLVLERGTAKSDRTGTGTRSLFGHQLRYDLSAGFPLLTTKKVHLKSVVYELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV++LH HGV+IWDEWA + G+LGPIYGVQWRSWP G +DQIS+ ++ LR DP Sbjct: 71 RGDSNVAWLHEHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHVDQISAALELLRTDP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 131 NSRRIIVSAWNVGEIPQMVLPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ QL R PR P++++ + + Sbjct: 191 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRTQLGREPRPYPELVLAQRD-SIFDYT 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y+D +++Y+PH AI A V+V Sbjct: 250 YDDVVIKNYDPHPAIKAPVAV 270 >gi|37524624|ref|NP_927968.1| thymidylate synthase [Photorhabdus luminescens subsp. laumondii TTO1] gi|62901350|sp|Q7N8U4|TYSY_PHOLL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|36784049|emb|CAE12918.1| Thymidylate synthase (TS) (TSase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 264 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMTRVLAEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YLH +GV+IWDEWAD++G+LGP+YG QWR+W DG IDQ+ ++++ L+ Sbjct: 61 WFLNGDTNIKYLHENGVTIWDEWADENGDLGPVYGKQWRAWGTADGRQIDQLKTVLEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR+LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTKLQLSREPRSLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH I A V++ Sbjct: 241 DYKFDDFEIVDYDPHPGIKAPVAI 264 >gi|168261848|ref|ZP_02683821.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349106|gb|EDZ35737.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 264 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLMHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|307129791|ref|YP_003881807.1| thymidylate synthetase [Dickeya dadantii 3937] gi|306527320|gb|ADM97250.1| thymidylate synthetase [Dickeya dadantii 3937] Length = 264 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YLH + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ+ ++++ L+ Sbjct: 61 WFLNGDTNVGYLHDNKVTIWDEWADENGDLGPVYGKQWRAWGTADGRQIDQLQTVLKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYNNHLEQTHLQLSREPRPLPRLVIKRRPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH AI A V+V Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264 >gi|322831560|ref|YP_004211587.1| thymidylate synthase [Rahnella sp. Y9602] gi|321166761|gb|ADW72460.1| thymidylate synthase [Rahnella sp. Y9602] Length = 264 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMQKVLDEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ++S+V+ L+ Sbjct: 61 WFLKGETNIAYLRENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLASVVEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+PH AI A V++ Sbjct: 241 DYNFEDFEIEGYDPHPAIKAPVAI 264 >gi|41408967|ref|NP_961803.1| thymidylate synthase [Mycobacterium avium subsp. paratuberculosis K-10] gi|62901338|sp|Q73VZ2|TYSY_MYCPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|41397326|gb|AAS05186.1| ThyA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 266 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 165/261 (63%), Positives = 199/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH KSVV+ELLWFL Sbjct: 7 YEDLLRLVLDRGTAKSDRTGTGTRSLFGQQLRYDLSAGFPLITTKKVHLKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +LHRHGV+IWDEWA G+LGPIYGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNVDWLHRHGVTIWDEWASDTGDLGPIYGVQWRSWPTPSGEHIDQISAALDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGEIPRMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ LQLSR PR P++I+ + + + Sbjct: 187 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELILA-HRDSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y+D + +Y+PH AI A V+V Sbjct: 246 YDDVVVHNYDPHPAIKAPVAV 266 >gi|108799079|ref|YP_639276.1| thymidylate synthase [Mycobacterium sp. MCS] gi|119868194|ref|YP_938146.1| thymidylate synthase [Mycobacterium sp. KMS] gi|126434685|ref|YP_001070376.1| thymidylate synthase [Mycobacterium sp. JLS] gi|123070298|sp|Q1BA64|TYSY_MYCSS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231714|sp|A3PYA8|TYSY_MYCSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231715|sp|A1UEU8|TYSY_MYCSK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|108769498|gb|ABG08220.1| thymidylate synthase [Mycobacterium sp. MCS] gi|119694283|gb|ABL91356.1| thymidylate synthase [Mycobacterium sp. KMS] gi|126234485|gb|ABN97885.1| thymidylate synthase [Mycobacterium sp. JLS] Length = 266 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 161/261 (61%), Positives = 199/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V + G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KSVV+ELLWFL Sbjct: 7 YEDLLRLVFERGTPKSDRTGTGTRSLFGHQMRYDLAAGFPLITTKKVHLKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L HGV+IWDEWA + GELGP+YGVQWRSWP G +DQIS+ V LR DP Sbjct: 67 RGESNVRWLQEHGVTIWDEWASETGELGPVYGVQWRSWPTPSGGHVDQISAAVDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ QLSR PR P++++ + + Sbjct: 187 LTHMMAAQAGLGVGEFVWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAQRD-SIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++Y+PH AI A V+V Sbjct: 246 YEDVVVKNYDPHPAIKAPVAV 266 >gi|24114106|ref|NP_708616.1| thymidylate synthase [Shigella flexneri 2a str. 301] gi|30064168|ref|NP_838339.1| thymidylate synthase [Shigella flexneri 2a str. 2457T] gi|110806763|ref|YP_690283.1| thymidylate synthase [Shigella flexneri 5 str. 8401] gi|27735263|sp|P48464|TYSY_SHIFL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123146739|sp|Q0T137|TYSY_SHIF8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|24053240|gb|AAN44323.1| thymidylate synthetase [Shigella flexneri 2a str. 301] gi|30042425|gb|AAP18149.1| thymidylate synthetase [Shigella flexneri 2a str. 2457T] gi|110616311|gb|ABF04978.1| thymidylate synthetase [Shigella flexneri 5 str. 8401] gi|313647891|gb|EFS12337.1| thymidylate synthase [Shigella flexneri 2a str. 2457T] gi|332753548|gb|EGJ83928.1| thymidylate synthase [Shigella flexneri 4343-70] gi|332753684|gb|EGJ84063.1| thymidylate synthase [Shigella flexneri K-671] gi|332754710|gb|EGJ85076.1| thymidylate synthase [Shigella flexneri 2747-71] gi|332999926|gb|EGK19509.1| thymidylate synthase [Shigella flexneri K-218] gi|333015044|gb|EGK34387.1| thymidylate synthase [Shigella flexneri K-304] Length = 264 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH + A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGVKAPVAI 264 >gi|238754836|ref|ZP_04616187.1| Thymidylate synthase [Yersinia ruckeri ATCC 29473] gi|238706996|gb|EEP99362.1| Thymidylate synthase [Yersinia ruckeri ATCC 29473] Length = 264 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLDEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S +V+ L+ Sbjct: 61 WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCHLEVGDFVWTGGDTHLYNNHMEQTQLQLSREPRALPKLVIKRKPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+PH AI A V++ Sbjct: 241 DYHFEDFEIEGYDPHPAIKAPVAI 264 >gi|230780|pdb|2TSC|A Chain A, Structure, Multiple Site Binding, And Segmental Accomodation In Thymidylate Synthase On Binding DUMP AND An Anti-Folate gi|230781|pdb|2TSC|B Chain B, Structure, Multiple Site Binding, And Segmental Accomodation In Thymidylate Synthase On Binding DUMP AND An Anti-Folate Length = 264 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRAPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|213964887|ref|ZP_03393086.1| thymidylate synthase [Corynebacterium amycolatum SK46] gi|213952423|gb|EEB63806.1| thymidylate synthase [Corynebacterium amycolatum SK46] Length = 278 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 160/261 (61%), Positives = 200/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GTRS FG Q+RFDLS+GFPL+TTKKVH KS+V+ELLWFL Sbjct: 19 YEDLLREILADGAAKSDRTGTGTRSVFGRQLRFDLSEGFPLITTKKVHLKSIVYELLWFL 78 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV+IWDEWAD DG+LGP+YGVQWRSWP DG+ IDQI+ +++L+++P Sbjct: 79 RGDSNVRWLQDRGVTIWDEWADDDGDLGPVYGVQWRSWPTPDGHHIDQIAQALETLKSNP 138 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 139 DSRRNIVSAWNVSEISNMALPPCHLLFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 198 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G GEFI T GD H+Y+NH EQ +LQ+SR PR P + + + + Sbjct: 199 LTHMMAQQAGLDVGEFIWTGGDCHIYDNHIEQCELQVSREPRPYPTLKLR-KADSIFDYA 257 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + Y+PH I +V+V Sbjct: 258 YEDIEVIGYDPHPLIRGQVAV 278 >gi|161506456|ref|YP_001573568.1| thymidylate synthase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189036941|sp|A9MS82|TYSY_SALAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|160867803|gb|ABX24426.1| hypothetical protein SARI_04659 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 264 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG+ IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGHHIDQITTVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV + KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADRKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+FI T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEAGDFIWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|332975369|gb|EGK12263.1| thymidylate synthase [Desmospora sp. 8437] Length = 264 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL + ++K G+ + DRTG GT S FG+QMRFDL +GFPL+TTKK+H +S++HELL Sbjct: 1 MKAYLDLCQRILKEGTRKEDRTGTGTLSLFGHQMRFDLGEGFPLVTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N+ YL H V IW+EWAD++G+LGP+YG QWRS+ DG +DQI +V ++ Sbjct: 61 WFLQGSTNIRYLQEHQVRIWNEWADENGDLGPVYGKQWRSFSGADGKTVDQIQWVVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN +++MALPPCHCLFQFYV +G LSCQLYQRSGD FLGIPFNIAS Sbjct: 121 RNPDSRRLIVSAWNPTELEEMALPPCHCLFQFYVKDGTLSCQLYQRSGDTFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + GEFIHTLGD HLY NH +Q QL+R P LP + +NP++ + Sbjct: 181 YALLTHMIAHVTGLKPGEFIHTLGDAHLYLNHLDQVKEQLTRQPLPLPTLKLNPDVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YED + Y+ H I +VSV Sbjct: 241 DFTYEDIRIEGYQSHPHIKGEVSV 264 >gi|82545129|ref|YP_409076.1| thymidylate synthase [Shigella boydii Sb227] gi|123741947|sp|Q31XG0|TYSY_SHIBS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|81246540|gb|ABB67248.1| thymidylate synthetase [Shigella boydii Sb227] gi|320185586|gb|EFW60351.1| Thymidylate synthase [Shigella flexneri CDC 796-83] gi|332091971|gb|EGI97049.1| thymidylate synthase [Shigella boydii 3594-74] Length = 264 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y PH I A V++ Sbjct: 241 DYRFEDFEIEGYAPHPGIKAPVAI 264 >gi|118465321|ref|YP_882829.1| thymidylate synthase [Mycobacterium avium 104] gi|254776088|ref|ZP_05217604.1| thymidylate synthase [Mycobacterium avium subsp. avium ATCC 25291] gi|166231711|sp|A0QIU1|TYSY_MYCA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|118166608|gb|ABK67505.1| thymidylate synthase [Mycobacterium avium 104] Length = 266 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 164/261 (62%), Positives = 199/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH KSVV+ELLWFL Sbjct: 7 YEDLLRLVLDRGTAKSDRTGTGTRSLFGQQLRYDLSAGFPLITTKKVHLKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +LHRHGV+IWDEWA G+LGPIYGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNVDWLHRHGVTIWDEWASDTGDLGPIYGVQWRSWPTPSGEHIDQISAALDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGEIPRMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ LQLSR PR P++++ + + + Sbjct: 187 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELVLA-HRDSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y+D + +Y+PH AI A V+V Sbjct: 246 YDDVVVHNYDPHPAIKAPVAV 266 >gi|82778203|ref|YP_404552.1| thymidylate synthase [Shigella dysenteriae Sd197] gi|309785137|ref|ZP_07679768.1| thymidylate synthase [Shigella dysenteriae 1617] gi|123728515|sp|Q32C94|TYSY_SHIDS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|81242351|gb|ABB63061.1| thymidylate synthetase [Shigella dysenteriae Sd197] gi|308926257|gb|EFP71733.1| thymidylate synthase [Shigella dysenteriae 1617] Length = 264 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGNTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|261342247|ref|ZP_05970105.1| thymidylate synthase [Enterobacter cancerogenus ATCC 35316] gi|288315583|gb|EFC54521.1| thymidylate synthase [Enterobacter cancerogenus ATCC 35316] Length = 264 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH +Q LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|310766593|gb|ADP11543.1| thymidylate synthetase [Erwinia sp. Ejp617] Length = 264 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+S +++ L+ Sbjct: 61 WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLSKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +DKMAL PCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL R PR LP+++I L Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH AI A V++ Sbjct: 241 DYCFDDFEIEGYDPHPAIKAPVAI 264 >gi|327332419|gb|EGE74155.1| thymidylate synthase [Propionibacterium acnes HL097PA1] Length = 270 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 162/270 (60%), Positives = 202/270 (74%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG IDQI+ +V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDGGTIDQIAKVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV D G LSCQLYQRSGD FLG+ Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270 >gi|146312910|ref|YP_001177984.1| thymidylate synthase [Enterobacter sp. 638] gi|166991230|sp|A4WE03|TYSY_ENT38 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145319786|gb|ABP61933.1| thymidylate synthase [Enterobacter sp. 638] Length = 264 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL + VSIWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLRENNVSIWDEWADENGNLGPVYGHQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|317493219|ref|ZP_07951642.1| thymidylate synthase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918879|gb|EFV40215.1| thymidylate synthase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 264 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLAEGTQKADRTGTGTVSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + V+IWDEWAD++G+LGP+YG QWR+W DG IDQIS +++ L+ Sbjct: 61 WFLNGDTNTAYLRENNVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQISKVMEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQLDLDVGDFVWTGGDTHLYSNHMEQTQLQLSREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|224584790|ref|YP_002638588.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254790248|sp|C0PXI9|TYSY_SALPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|224469317|gb|ACN47147.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 264 Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKHCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|251790775|ref|YP_003005496.1| thymidylate synthase [Dickeya zeae Ech1591] gi|247539396|gb|ACT08017.1| thymidylate synthase [Dickeya zeae Ech1591] Length = 264 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 156/264 (59%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL+ + VSIWDEWAD++G LGP+YG QWR+W DG IDQ+ +++ L+ Sbjct: 61 WFLNGDTNIGYLNDNKVSIWDEWADENGSLGPVYGKQWRAWGAADGRQIDQLQTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYNNHLEQTRLQLSREPRPLPRLVIKRRPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V+V Sbjct: 241 DYRFEDFDIEGYDPHPAIKAPVAV 264 >gi|238792783|ref|ZP_04636414.1| Thymidylate synthase [Yersinia intermedia ATCC 29909] gi|238727891|gb|EEQ19414.1| Thymidylate synthase [Yersinia intermedia ATCC 29909] Length = 264 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S++V+ L+ Sbjct: 61 WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +++MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ +LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCELDVGDFVWTGGDTHLYSNHIEQTNLQLSREPRALPKLIIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A +++ Sbjct: 241 DYRFEDFDIEGYDPHPGIKAPIAI 264 >gi|145224587|ref|YP_001135265.1| thymidylate synthase [Mycobacterium gilvum PYR-GCK] gi|189036939|sp|A4TCI9|TYSY_MYCGI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145217073|gb|ABP46477.1| thymidylate synthase [Mycobacterium gilvum PYR-GCK] Length = 266 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 160/261 (61%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 7 YEDLLRLVLDTGTPKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV+IWDEWA G+LGP+YGVQWRSWP G IDQIS+ + L+ DP Sbjct: 67 RGDSNVRWLQERGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGEHIDQISAALDLLKRDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ QLSR PR P++++ P + + Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAPRD-SIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++YEPH AI A V++ Sbjct: 246 YEDVVIKNYEPHPAIKAPVAI 266 >gi|16761778|ref|NP_457395.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143262|ref|NP_806604.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051490|ref|ZP_03344368.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213579810|ref|ZP_03361636.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213622588|ref|ZP_03375371.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213850170|ref|ZP_03381068.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|20455348|sp|Q8Z412|TYSY_SALTI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|25286009|pir||AB0866 thymidylate synthetase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504080|emb|CAD02826.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138895|gb|AAO70464.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 264 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|294635084|ref|ZP_06713597.1| thymidylate synthase [Edwardsiella tarda ATCC 23685] gi|291091524|gb|EFE24085.1| thymidylate synthase [Edwardsiella tarda ATCC 23685] Length = 264 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMRKVLDEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV+YLH + V+IWDEWAD+ G+LGP+YG QWR+W DG +DQIS ++ LR Sbjct: 61 WFLKGETNVNYLHDNNVTIWDEWADEQGDLGPVYGKQWRAWGCADGRQVDQISQVMAQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP++++ + Sbjct: 181 YALLVHMMAQQLDLAVGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPRLVLARRPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAI 264 >gi|161761105|pdb|2VET|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q Complexed With Dump gi|163931137|pdb|3B5B|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q gi|163931138|pdb|3B5B|B Chain B, Crystal Structure Of The Thymidylate Synthase K48q Length = 264 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TT++ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTQRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|291618667|ref|YP_003521409.1| ThyA [Pantoea ananatis LMG 20103] gi|291153697|gb|ADD78281.1| ThyA [Pantoea ananatis LMG 20103] Length = 279 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R+V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 16 MKQYLDLMRYVLNEGTPKSDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 75 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD+ G LGP+YG QWRSW G IDQI+ +++ L+ Sbjct: 76 WFLQGDTNIGYLKENNVSIWDEWADEQGNLGPVYGKQWRSWGTASGQEIDQITKVIEQLK 135 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 136 RDPDSRRIIVSAWNVGELDEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 195 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQA LQL+R PR LP ++I L Sbjct: 196 YALLVHMVAQQCDLDVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPTLVIKRKPASLF 255 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH AI A V+V Sbjct: 256 DYRFDDFEIEGYDPHPAIKAPVAV 279 >gi|315444918|ref|YP_004077797.1| thymidylate synthase [Mycobacterium sp. Spyr1] gi|315263221|gb|ADT99962.1| thymidylate synthase [Mycobacterium sp. Spyr1] Length = 266 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 160/261 (61%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 7 YEDLLRLVLDTGTPKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV+IWDEWA G+LGP+YGVQWRSWP G IDQIS+ + L+ DP Sbjct: 67 RGDSNVRWLQERGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGEHIDQISAALDLLKHDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ QLSR PR P++++ P + + Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAPRD-SIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++YEPH AI A V++ Sbjct: 246 YEDVVIKNYEPHPAIKAPVAI 266 >gi|157162279|ref|YP_001459597.1| thymidylate synthase [Escherichia coli HS] gi|170018930|ref|YP_001723884.1| thymidylate synthase [Escherichia coli ATCC 8739] gi|256019377|ref|ZP_05433242.1| thymidylate synthase [Shigella sp. D9] gi|312972955|ref|ZP_07787128.1| thymidylate synthase [Escherichia coli 1827-70] gi|332280497|ref|ZP_08392910.1| thymidylate synthase [Shigella sp. D9] gi|166991229|sp|A8A3W0|TYSY_ECOHS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036933|sp|B1IU17|TYSY_ECOLC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157067959|gb|ABV07214.1| thymidylate synthase [Escherichia coli HS] gi|169753858|gb|ACA76557.1| Thymidylate synthase [Escherichia coli ATCC 8739] gi|310332897|gb|EFQ00111.1| thymidylate synthase [Escherichia coli 1827-70] gi|332102849|gb|EGJ06195.1| thymidylate synthase [Shigella sp. D9] Length = 264 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGNTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|217976787|ref|YP_002360934.1| Thymidylate synthase [Methylocella silvestris BL2] gi|254790244|sp|B8ELI3|TYSY_METSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|217502163|gb|ACK49572.1| Thymidylate synthase [Methylocella silvestris BL2] Length = 269 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 159/269 (59%), Positives = 198/269 (73%), Gaps = 5/269 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+ +++ G + DRTG GT S FGYQMRFDL GFPL+TTKK+HWKS+VHEL+ Sbjct: 1 MQAYLDLIDKILREGVRKPDRTGTGTLSIFGYQMRFDLGAGFPLVTTKKLHWKSIVHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL +GV IWDEWAD G+LGP+YG QWRSW DG IDQI++++ ++ Sbjct: 61 WFLRGDTNIGYLKDNGVGIWDEWADDSGDLGPVYGRQWRSWQAPDGRTIDQIANVIDEIQ 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVFLGIP 175 DP+SRR +VSAWN A + MAL PCHCLFQF V + +L QLYQRSGD FLG P Sbjct: 121 RDPFSRRLLVSAWNPADLPAMALAPCHCLFQFNVRDDSTGTRRLDLQLYQRSGDAFLGAP 180 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT ++ASV G G+F+HT GD HLY NH +QA LQLSR PR LP++ IN N Sbjct: 181 FNIASYALLTELVASVCGLTPGDFVHTFGDAHLYLNHIDQAKLQLSRDPRPLPRLRINGN 240 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + L R+ED +L +Y+PH I A V+V Sbjct: 241 VKSLFDIRFEDLSLENYDPHPVIKAPVAV 269 >gi|86141845|ref|ZP_01060369.1| thymidylate synthase [Leeuwenhoekiella blandensis MED217] gi|85831408|gb|EAQ49864.1| thymidylate synthase [Leeuwenhoekiella blandensis MED217] Length = 283 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 157/286 (54%), Positives = 204/286 (71%), Gaps = 25/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++H++ G+ + DRTG GT S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MQQYHDLVKHILNNGAQKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGV IW+EWAD+DG LGP+YG QWR+W + IDQI +++SL+ Sbjct: 61 WFLKGDTNIEYLKEHGVRIWNEWADEDGNLGPVYGHQWRNW---NSEEIDQIKEVIESLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNG---------K 158 +P SRR +VSAWN +++ K ALPPCH FQFYV G K Sbjct: 118 NNPNSRRMLVSAWNPSVMPDTSKSFAENVANGKAALPPCHAFFQFYVAPGDPEAEDKRPK 177 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQLYQRS DVFLG+PFNIASY+L TMM+A V + G+FIHT GD H+YNNH EQ +L Sbjct: 178 LSCQLYQRSADVFLGVPFNIASYALFTMMMAQVCDYAPGDFIHTFGDAHIYNNHIEQLNL 237 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL+R R LP M +NP + D+ SF ++DF L +Y+PH I KV++ Sbjct: 238 QLTREIRKLPTMTLNPEVKDIFSFSFDDFKLENYDPHPHIKGKVAI 283 >gi|152968378|ref|YP_001364162.1| Thymidylate synthase [Kineococcus radiotolerans SRS30216] gi|189036937|sp|A6WGF9|TYSY_KINRD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|151362895|gb|ABS05898.1| Thymidylate synthase [Kineococcus radiotolerans SRS30216] Length = 268 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 156/262 (59%), Positives = 201/262 (76%), Gaps = 2/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLRHV+ G+ + DRTG GTRS FG+Q+R+DLS GFPL+TTK+VH+KS+ ELLWF Sbjct: 9 QYEDLLRHVLATGTPKSDRTGTGTRSVFGHQLRYDLSAGFPLVTTKRVHFKSIALELLWF 68 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD NV +L GV+IWDEWAD++G+LGP+YGVQWRSWP DG +DQI+ ++ +LR D Sbjct: 69 LRGDGNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGRHVDQIAQVLHTLRTD 128 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNVA +D+MAL PCH FQF+V +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 129 PDSRRMVVSAWNVAELDRMALAPCHAFFQFHVADGKLSCQLYQRSADLFLGVPFNIASYA 188 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT ++A+ +G + G+F+ T GDVH+Y+NH EQ QL+R+P P++ + P L Sbjct: 189 LLTHLVAAEVGLEVGDFVWTGGDVHVYDNHVEQVTEQLTRTPYPFPRLAVRP--AGLFEH 246 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YEDF + Y H AI A V+V Sbjct: 247 EYEDFEVLDYRHHPAIKAPVAV 268 >gi|226307948|ref|YP_002767908.1| thymidylate synthase [Rhodococcus erythropolis PR4] gi|229495127|ref|ZP_04388873.1| thymidylate synthase [Rhodococcus erythropolis SK121] gi|226187065|dbj|BAH35169.1| thymidylate synthase [Rhodococcus erythropolis PR4] gi|229318058|gb|EEN83933.1| thymidylate synthase [Rhodococcus erythropolis SK121] Length = 266 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 162/261 (62%), Positives = 199/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG+QMRFDL+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 7 YEDLLRLVMETGTAKSDRTGTGTRSIFGHQMRFDLADGFPLVTTKKVHLKSIVNELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV++LH HGVSIWDEWAD++GELGP+YGVQWRSWP G IDQI+ V++LR++P Sbjct: 67 RGDSNVAWLHEHGVSIWDEWADENGELGPVYGVQWRSWPTPSGEHIDQITQTVETLRSNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNVA I +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVADIPQMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G GEF+ T GD H+Y+NH +Q QL R P LP + +N + + Sbjct: 187 LTHMMAQQAGLDVGEFVWTGGDCHIYDNHVDQVTEQLGREPLPLPTLKLNKRD-SIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y+ H AI A V+V Sbjct: 246 FEDVEIVDYQHHPAIKAPVAV 266 >gi|2098345|pdb|1KCE|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|2098346|pdb|1KCE|B Chain B, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|2392565|pdb|1TLS|A Chain A, Thymidylate Synthase Ternary Complex With Fdump And Methylenetetrahydrofolate gi|2392566|pdb|1TLS|B Chain B, Thymidylate Synthase Ternary Complex With Fdump And Methylenetetrahydrofolate gi|9257011|pdb|1F4B|A Chain A, Crystal Structure Of Escherichia Coli Thymidylate Synthase gi|9257012|pdb|1F4C|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase Covalently Modified At C146 With N-[tosyl-D-Prolinyl]amino- Ethanethiol gi|9257013|pdb|1F4C|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase Covalently Modified At C146 With N-[tosyl-D-Prolinyl]amino- Ethanethiol gi|9257016|pdb|1F4E|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Tosyl-D-Proline gi|9257017|pdb|1F4F|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Sp-722 gi|9257018|pdb|1F4F|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Sp-722 gi|15988332|pdb|1JTQ|A Chain A, E. Coli Ts Complex With Dump And The Pyrrolo(2,3-D) Pyrimidine-Based Antifolate Ly341770 gi|15988333|pdb|1JTQ|B Chain B, E. Coli Ts Complex With Dump And The Pyrrolo(2,3-D) Pyrimidine-Based Antifolate Ly341770 gi|15988334|pdb|1JTU|A Chain A, E. Coli Thymidylate Synthase In A Complex With Dump And Ly338913, A Polyglutamylated Pyrrolo(2,3-D)pyrimidine- Based Antifolate gi|15988335|pdb|1JTU|B Chain B, E. Coli Thymidylate Synthase In A Complex With Dump And Ly338913, A Polyglutamylated Pyrrolo(2,3-D)pyrimidine- Based Antifolate gi|15988346|pdb|1JUT|A Chain A, E. Coli Thymidylate Synthase Bound To Dump And Ly338529, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988347|pdb|1JUT|B Chain B, E. Coli Thymidylate Synthase Bound To Dump And Ly338529, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|21730588|pdb|1KZI|A Chain A, Crystal Structure Of EctsDUMPTHF COMPLEX gi|21730589|pdb|1KZI|B Chain B, Crystal Structure Of EctsDUMPTHF COMPLEX gi|82407729|pdb|2A9W|A Chain A, E. Coli Ts Complexed With Dump And Inhibitor Ga9 gi|82407730|pdb|2A9W|B Chain B, E. Coli Ts Complexed With Dump And Inhibitor Ga9 gi|82407731|pdb|2A9W|C Chain C, E. Coli Ts Complexed With Dump And Inhibitor Ga9 gi|82407732|pdb|2A9W|D Chain D, E. Coli Ts Complexed With Dump And Inhibitor Ga9 gi|93279929|pdb|2G8O|A Chain A, High Resolution Structure Of Escherichia Coli Thymidylate Synthase Ternary Complex With Dump And A Cofactor Analog, Cb3717 gi|93279930|pdb|2G8O|B Chain B, High Resolution Structure Of Escherichia Coli Thymidylate Synthase Ternary Complex With Dump And A Cofactor Analog, Cb3717 gi|99032326|pdb|2FTQ|A Chain A, E. Coli Thymidylate Synthase At 1.8 A Resolution gi|157834019|pdb|1TSN|A Chain A, Thymidylate Synthase Ternary Complex With Fdump And Methylenetetrahydrofolate gi|215261129|pdb|3B9H|A Chain A, E. Coli Thymidylate Synthase Complexed With 5-Nitro-2'- Deoxy Uridine gi|215794590|pdb|3BHL|A Chain A, E.Coli Thymidylate Synthase Complexes With 5-No2dump And Tetrahydrofolate At 1.4 A Resolution gi|215794591|pdb|3BHL|B Chain B, E.Coli Thymidylate Synthase Complexes With 5-No2dump And Tetrahydrofolate At 1.4 A Resolution gi|215794592|pdb|3BHR|A Chain A, E. Coli Ts Complexed With 5-No2dump And Tetrahydrofolate At 1.9 A Resolution (Space Group 152) Length = 264 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 152/262 (58%), Positives = 200/262 (76%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|304396692|ref|ZP_07378572.1| thymidylate synthase [Pantoea sp. aB] gi|304355488|gb|EFM19855.1| thymidylate synthase [Pantoea sp. aB] Length = 264 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMQHVLHEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + VSIWDEWAD++G+LGP+YG QWRSW G IDQ+S +++ L+ Sbjct: 61 WFLKGDTNIAYLRENKVSIWDEWADENGDLGPVYGKQWRSWGTASGQEIDQLSQVMEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV + +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RDPDSRRIIVSAWNVGELSEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQA LQL+R PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH AI A V+V Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264 >gi|327395047|dbj|BAK12469.1| thymidylate synthase ThyA [Pantoea ananatis AJ13355] Length = 264 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R+V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMRYVLNEGTPKSDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD+ G LGP+YG QWRSW G IDQI+ +++ L+ Sbjct: 61 WFLQGDTNIGYLKENNVSIWDEWADEQGNLGPVYGKQWRSWGTASGQEIDQITKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RDPDSRRIIVSAWNVGELDEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQA LQL+R PR LP ++I L Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPTLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH AI A V+V Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAV 264 >gi|209761048|gb|ACI78836.1| thymidylate synthetase [Escherichia coli] gi|320645721|gb|EFX14706.1| thymidylate synthase [Escherichia coli O157:H- str. 493-89] gi|320651021|gb|EFX19461.1| thymidylate synthase [Escherichia coli O157:H- str. H 2687] gi|332087353|gb|EGI92481.1| thymidylate synthase [Shigella boydii 5216-82] Length = 264 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWIGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|302532527|ref|ZP_07284869.1| thymidylate synthase [Streptomyces sp. C] gi|302441422|gb|EFL13238.1| thymidylate synthase [Streptomyces sp. C] Length = 265 Score = 341 bits (875), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 161/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLRHV+ G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH KS+V+ELLWF Sbjct: 5 QYEDLLRHVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLKSIVYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L HGV+IWDEWAD DGELGP+YGVQWRSWP DG +DQI+ ++ +LR D Sbjct: 65 LRGDSNVGWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPDGRHVDQITEVLDTLRRD 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV+ + +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRMIVSAWNVSELSRMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G + G+FI T GD H+Y+NH EQ QLSR+P P++ + L + Sbjct: 185 LLTHMVAQQTGLEPGDFIWTGGDCHIYDNHVEQVTEQLSRTPYEFPRLNLR-QADSLFDY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 Y D + Y H AI A V+V Sbjct: 244 AYSDVEVLDYRHHPAIKAPVAV 265 >gi|119716538|ref|YP_923503.1| thymidylate synthase [Nocardioides sp. JS614] gi|166231720|sp|A1SJ31|TYSY_NOCSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119537199|gb|ABL81816.1| thymidylate synthase [Nocardioides sp. JS614] Length = 273 Score = 341 bits (875), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 158/273 (57%), Positives = 201/273 (73%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+ V+ G + DRTG GT S FG+QMRFDL GFPL+TTKKVH +SV ELL Sbjct: 1 MRAYLDLLQRVVDEGVPKGDRTGTGTLSVFGHQMRFDLRAGFPLVTTKKVHTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L G++IWDEWAD+ G+LGP+YG QWRSWP DG +DQI+ +V+ +R Sbjct: 61 WFLRGDTNVKWLQDRGITIWDEWADEQGDLGPVYGYQWRSWPTPDGRHVDQIAQVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---------DNGKLSCQLYQRSGDVF 171 P SRRH+VSAWNVA I MAL PCH +FQFYV G+LSCQLYQRS DVF Sbjct: 121 DSPDSRRHVVSAWNVADIPDMALAPCHTMFQFYVAPPGPGEESGPGRLSCQLYQRSADVF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLT M+A V G + G+F+HTLGD HLY+NH +QA LQL+R PR LP+++ Sbjct: 181 LGVPFNIASYALLTHMVAQVTGLEVGDFVHTLGDAHLYSNHLDQARLQLTREPRPLPRLV 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ ++ +L +F E + Y+PH I A ++V Sbjct: 241 LDSSVTELDAFDLEHIAVEGYDPHPGIKAPIAV 273 >gi|194439864|ref|ZP_03071928.1| thymidylate synthase [Escherichia coli 101-1] gi|253772319|ref|YP_003035150.1| thymidylate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162755|ref|YP_003045863.1| thymidylate synthase [Escherichia coli B str. REL606] gi|297518254|ref|ZP_06936640.1| thymidylate synthase [Escherichia coli OP50] gi|300931292|ref|ZP_07146631.1| thymidylate synthase [Escherichia coli MS 187-1] gi|194421201|gb|EDX37224.1| thymidylate synthase [Escherichia coli 101-1] gi|242378375|emb|CAQ33153.1| thymidylate synthase [Escherichia coli BL21(DE3)] gi|253323363|gb|ACT27965.1| thymidylate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974656|gb|ACT40327.1| thymidylate synthase [Escherichia coli B str. REL606] gi|253978821|gb|ACT44491.1| thymidylate synthase [Escherichia coli BL21(DE3)] gi|300460876|gb|EFK24369.1| thymidylate synthase [Escherichia coli MS 187-1] gi|323960730|gb|EGB56353.1| thymidylate synthase [Escherichia coli H489] gi|323971644|gb|EGB66874.1| thymidylate synthase [Escherichia coli TA007] Length = 264 Score = 341 bits (875), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+PH I A V++ Sbjct: 241 DYSFEDFEIEGYDPHPGIKAPVAI 264 >gi|293394670|ref|ZP_06638962.1| thymidylate synthase [Serratia odorifera DSM 4582] gi|291422796|gb|EFE96033.1| thymidylate synthase [Serratia odorifera DSM 4582] Length = 264 Score = 341 bits (875), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLAEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ+S+++Q L+ Sbjct: 61 WFLNGDTNTAYLRDNKVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVLQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +++MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRPLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH AI A V++ Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAI 264 >gi|24022343|gb|AAN41256.1| mutant thymidilate synthetase [Escherichia coli] Length = 264 Score = 341 bits (875), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFP +TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPQVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|297625969|ref|YP_003687732.1| Thymidylate synthase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921734|emb|CBL56292.1| Thymidylate synthase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 270 Score = 341 bits (874), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 157/270 (58%), Positives = 202/270 (74%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G D+ DRTGVGTRS FG+QMRF L+ GFPL+TTKK++ + V ELL Sbjct: 1 MRQYLDLLTRVMDEGIDKSDRTGVGTRSVFGHQMRFHLADGFPLVTTKKIYTRGVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +LHR+ V IWDEWAD++G+LGP+YG QWRSWP G +DQ++ ++ ++ Sbjct: 61 WFLRGDTNIGWLHRNNVHIWDEWADENGDLGPVYGHQWRSWPVPGGGHVDQLAKVIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGI 174 DP SRR +VSAWNVA +D MALPPCH LFQFYV GKLSC LYQRS D+FLG+ Sbjct: 121 NDPNSRRLVVSAWNVAEVDDMALPPCHLLFQFYVTPGEDGQPGKLSCGLYQRSADLFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT M+A V G G+F+HTLGD H+Y+NHF+Q QLSR+P+ LP++ +NP Sbjct: 181 PFNIASYALLTHMVAQVCGLGVGDFVHTLGDAHIYHNHFDQVAEQLSRTPKALPRLALNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++ F D T+ YEP AI A ++V Sbjct: 241 QVRNIDEFELSDITVEGYEPDPAIKAPIAV 270 >gi|120403371|ref|YP_953200.1| thymidylate synthase [Mycobacterium vanbaalenii PYR-1] gi|166231718|sp|A1T7P4|TYSY_MYCVP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119956189|gb|ABM13194.1| thymidylate synthase [Mycobacterium vanbaalenii PYR-1] Length = 266 Score = 341 bits (874), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 7 YEDLLRLVLDTGTTKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L HGV+IWDEWA G+LGP+YGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNVRWLQEHGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGAHIDQISAALDLLRRDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVSGGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ QLSR PR P++++ L + Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSREPRPYPELVLAQRD-SLFDYI 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++Y+PH AI A V+V Sbjct: 246 YEDVVIKNYDPHPAIKAPVAV 266 >gi|308187979|ref|YP_003932110.1| thymidylate synthetase [Pantoea vagans C9-1] gi|308058489|gb|ADO10661.1| thymidylate synthetase [Pantoea vagans C9-1] Length = 264 Score = 341 bits (874), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMQHVLHEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSW G IDQ+S +++ L+ Sbjct: 61 WFLKGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRSWGTASGQEIDQLSQVMEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV + +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RDPDSRRIIVSAWNVGELSEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQA LQL+R PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH AI A V++ Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAI 264 >gi|283479574|emb|CAY75490.1| thymidylate synthetase [Erwinia pyrifoliae DSM 12163] Length = 279 Score = 340 bits (873), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 16 MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 75 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+S +++ L+ Sbjct: 76 WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 135 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +++MAL PCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 136 SDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 195 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL R PR LP+++I L Sbjct: 196 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 255 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH AI A V++ Sbjct: 256 DYCFDDFEIEGYDPHPAIKAPVAI 279 >gi|7766859|pdb|1EV5|A Chain A, Crystal Structure Analysis Of Ala167 Mutant Of Escherichia Coli Length = 264 Score = 340 bits (873), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 200/262 (76%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRAXDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|68535511|ref|YP_250216.1| thymidylate synthase [Corynebacterium jeikeium K411] gi|123761908|sp|Q4JX59|TYSY_CORJK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|68263110|emb|CAI36598.1| thyA [Corynebacterium jeikeium K411] Length = 273 Score = 340 bits (873), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 159/261 (60%), Positives = 197/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ G+ + DRTG GT S FG Q+R+DLS GFPL+TTK VH KSVV ELLWFL Sbjct: 14 YEDLLREILETGTPKGDRTGTGTTSLFGRQIRYDLSAGFPLITTKSVHVKSVVGELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +G+ IW+EWAD++G+LGP+YGVQWRSWP +G IDQI+ +++L+ +P Sbjct: 74 RGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPNGQHIDQIAGALETLQTNP 133 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ +D MALPPCH LFQ YV NGKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 134 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVANGKLSCQLYQRSADMFLGVPFNIASYSL 193 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEFI T GD H+Y+NH EQ LQLSR R PQ+ +N D+ S+ Sbjct: 194 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHVEQVKLQLSRDARPYPQLKLN-KAADMFSYD 252 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + D Y+PH I AKV+V Sbjct: 253 FSDIEFTGYDPHPVIKAKVAV 273 >gi|9257019|pdb|1F4G|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Sp-876 gi|9257020|pdb|1F4G|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Sp-876 Length = 264 Score = 340 bits (873), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 152/262 (58%), Positives = 199/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMXAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|270158215|ref|ZP_06186872.1| thymidylate synthase [Legionella longbeachae D-4968] gi|269990240|gb|EEZ96494.1| thymidylate synthase [Legionella longbeachae D-4968] Length = 269 Score = 340 bits (873), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 157/264 (59%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL H++K G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H +S+VHELL Sbjct: 6 MKTYLNLLEHILKNGTRKTDRTGTGTLSIFGYQMRFDLSQGFPLLTTKKLHTRSIVHELL 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N++YL+ +GV+IWDEWAD +G+LGPIYG QWRSWP DG IDQ++ +VQ ++ Sbjct: 66 WFLSGNTNIAYLNENGVTIWDEWADSNGDLGPIYGKQWRSWPTSDGRTIDQLNEVVQEIK 125 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR +VSAWNV +++MAL PCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 126 SNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNILSCQLYQRSADVFLGVPFNIAS 185 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A Q G+FI T GD HLY NH EQA QL+R P L + I L Sbjct: 186 YSLLTHMVAEQCNLQVGDFIWTGGDCHLYLNHLEQARTQLTREPLPLATLNIKRKPQSLF 245 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF +Y+ H AI A ++V Sbjct: 246 EYTFDDFEFLNYQSHPAIKAPIAV 269 >gi|253988063|ref|YP_003039419.1| thymidylate synthase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779513|emb|CAQ82674.1| thymidylate synthase [Photorhabdus asymbiotica] Length = 264 Score = 340 bits (873), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 151/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKRVLEEGTSKADRTGTGTISIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YLH + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ+ ++++ L+ Sbjct: 61 WFLNGDTNIQYLHDNSVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLKTVLEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR+LP+++I L Sbjct: 181 YALLVHMIAQQCDLEVGDFVWTGGDTHLYSNHMEQTQLQLSREPRSLPKLMIKRKPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH I A V++ Sbjct: 241 DYKFDDFEIVDYDPHPGIKAPVAI 264 >gi|312964897|ref|ZP_07779137.1| thymidylate synthase [Escherichia coli 2362-75] gi|312290453|gb|EFR18333.1| thymidylate synthase [Escherichia coli 2362-75] Length = 264 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLS PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSCEPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|259909498|ref|YP_002649854.1| thymidylate synthase [Erwinia pyrifoliae Ep1/96] gi|224965120|emb|CAX56652.1| Thymidylate synthase [Erwinia pyrifoliae Ep1/96] Length = 264 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+S +++ L+ Sbjct: 61 WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +++MAL PCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL R PR LP+++I L Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH AI A V++ Sbjct: 241 DYCFDDFEIEGYDPHPAIKAPVAI 264 >gi|118617725|ref|YP_906057.1| thymidylate synthase [Mycobacterium ulcerans Agy99] gi|166231717|sp|A0PQG7|TYSY_MYCUA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|118569835|gb|ABL04586.1| thymidylate synthase ThyA [Mycobacterium ulcerans Agy99] Length = 266 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 162/261 (62%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG Q+R+DL GFPLLTTKKVH+KSVV+ELLWFL Sbjct: 7 YEDLLRRVLETGTAKSDRTGTGTRSLFGQQIRYDLGCGFPLLTTKKVHFKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +HGV+IWDEWA + G+LGPIYGVQWRSWP G IDQIS+ ++ LR DP Sbjct: 67 RGDSNVGWLQQHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISAALELLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGQIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ QL R PR P++ ++ + + Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVTEQLRREPRPYPKLSLSQRD-SIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED ++ Y+PH AI A V+V Sbjct: 246 YEDVVVQDYDPHPAIKAPVAV 266 >gi|187731322|ref|YP_001881432.1| thymidylate synthase [Shigella boydii CDC 3083-94] gi|187428314|gb|ACD07588.1| thymidylate synthase [Shigella boydii CDC 3083-94] Length = 264 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP D IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDRRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|294054859|ref|YP_003548517.1| thymidylate synthase [Coraliomargarita akajimensis DSM 45221] gi|293614192|gb|ADE54347.1| thymidylate synthase [Coraliomargarita akajimensis DSM 45221] Length = 264 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR V++ G+ R DRTG GT S FG Q RF LS FPLLTTKK+H +S++HELL Sbjct: 1 MKSYLDLLRTVLETGTFRDDRTGTGTYSIFGAQARFSLSPDFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++G++N+ YL + V IWDEWAD++G+LG +YG QWR W +G +DQ++ ++ +++ Sbjct: 61 WFIQGNTNIQYLKDNKVRIWDEWADENGDLGRVYGAQWRDWAAPNGEHVDQLADVIDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIV AWN I MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRHIVCAWNPGEIKHMALPPCHALFQFYVADGELSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + EF+HT GD+HLY NH +QA QLSR PR LPQM +NP++ + Sbjct: 181 YALLTMMIAQVCNLKPKEFVHTFGDLHLYANHVDQAKEQLSREPRALPQMKLNPDVHSIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I A ++V Sbjct: 241 DFKFEDFELVNYDPHPTIKAPIAV 264 >gi|189218127|ref|YP_001938769.1| thymidylate synthase [Methylacidiphilum infernorum V4] gi|189184985|gb|ACD82170.1| Thymidylate synthase [Methylacidiphilum infernorum V4] Length = 275 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL V+ FG ++DRTG+GT S FG Q++FDL+ GFPLLTTKK++WK++V+ELL Sbjct: 12 MQLYLQLLEKVLNFGIPKKDRTGIGTYSLFGEQLKFDLTLGFPLLTTKKLYWKAIVYELL 71 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH++GV+IWDEWAD++G LG IYG QWRSW +G +DQI+ ++ ++ Sbjct: 72 WFLKGDTNVAYLHQNGVTIWDEWADENGNLGRIYGAQWRSWRGANGRTVDQIAWVIDQIK 131 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWN A +++MALPPCH LFQFYV LSC+LYQRS D+FLG+PFNIAS Sbjct: 132 KDPDSRRLIVSAWNPAELEEMALPPCHVLFQFYVHYPYLSCKLYQRSADIFLGVPFNIAS 191 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A V G EFIH+ GD+HLY +H QA LQL R+P+ LP + INP + + Sbjct: 192 YSLLTHLVAQVTGLIPKEFIHSFGDIHLYASHLSQARLQLERTPKALPSLFINPKVKSID 251 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +ED L+ Y+PH I A V+V Sbjct: 252 DISFEDIELKGYDPHPPIKAAVAV 275 >gi|7766862|pdb|1EVG|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli With Unmodified Catalytic Cysteine Length = 264 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 200/262 (76%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRTCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|2392650|pdb|1ZPR|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|2392651|pdb|1ZPR|B Chain B, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 264 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 200/262 (76%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++H+LLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHQLLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|4140014|pdb|1DNA|A Chain A, D221(169)n Mutant Does Not Promote Opening Of The Cofactor Imidazolidine Ring gi|4140015|pdb|1DNA|B Chain B, D221(169)n Mutant Does Not Promote Opening Of The Cofactor Imidazolidine Ring gi|157830345|pdb|1BJG|A Chain A, D221(169)n Mutant Does Not Promote Opening Of The Cofactor Imidazolidine Ring Length = 264 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 200/262 (76%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS +VFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCNVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|161761106|pdb|2VF0|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q Complexed With 5no2dump And Bw1843u89 gi|161761107|pdb|2VF0|B Chain B, Crystal Structure Of The Thymidylate Synthase K48q Complexed With 5no2dump And Bw1843u89 Length = 264 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 200/262 (76%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TT++ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTQRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|15827801|ref|NP_302064.1| thymidylate synthase [Mycobacterium leprae TN] gi|221230278|ref|YP_002503694.1| thymidylate synthase [Mycobacterium leprae Br4923] gi|15214323|sp|Q9CBW0|TYSY_MYCLE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|13093353|emb|CAC30470.1| thymidylate synthase [Mycobacterium leprae] gi|219933385|emb|CAR71614.1| thymidylate synthase [Mycobacterium leprae Br4923] Length = 266 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH+KSVV+ELLWFL Sbjct: 7 YEDLLRLVLDCGVAKMDRTGTGTRSLFGQQLRYDLSVGFPLVTTKKVHFKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV++LH HGV+IWDEWA G+LGPIYGVQWRSWP G+ IDQIS+ + LR +P Sbjct: 67 RGDSNVAWLHEHGVNIWDEWASSTGDLGPIYGVQWRSWPTSSGDYIDQISTALDLLRTEP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGEIPQMALPPCHAFFQFYVAQGRLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ LQLSR PR P++ + + + Sbjct: 187 LTHMMAAQSGLLVGEFVWTGGDCHIYDNHVEQVQLQLSREPRAYPELFLAQRD-SIFDYV 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + +Y+PH AI A V++ Sbjct: 246 YEDVVVTNYDPHPAIKAPVAI 266 >gi|289163528|ref|YP_003453666.1| Thymidylate synthase [Legionella longbeachae NSW150] gi|288856701|emb|CBJ10512.1| Thymidylate synthase [Legionella longbeachae NSW150] Length = 264 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 157/264 (59%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL H++K G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H +S+VHELL Sbjct: 1 MKTYLNLLEHILKNGTRKTDRTGTGTLSIFGYQMRFDLSQGFPLLTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N++YL+ +GV+IWDEWAD +G+LGPIYG QWRSWP DG IDQ++ +VQ ++ Sbjct: 61 WFLSGNTNIAYLNENGVTIWDEWADSNGDLGPIYGKQWRSWPTSDGRTIDQLNEVVQEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR +VSAWNV +++MAL PCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNILSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A Q G+FI T GD HLY NH EQA QL+R P L + I L Sbjct: 181 YSLLTHMVAEQCNLQVGDFIWTGGDCHLYLNHLEQARTQLTREPLPLATLNIKRKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF +Y+ H AI A ++V Sbjct: 241 EYTFDDFEFLNYQSHPAIKAPIAV 264 >gi|200387449|ref|ZP_03214061.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604547|gb|EDZ03092.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 264 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+W DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWSTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|289425008|ref|ZP_06426787.1| thymidylate synthase [Propionibacterium acnes SK187] gi|289154707|gb|EFD03393.1| thymidylate synthase [Propionibacterium acnes SK187] Length = 270 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDKGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD G IDQI+ +V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV D G LSCQLYQRSGD FLG+ Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270 >gi|99032324|pdb|2FTN|A Chain A, E. Coli Thymidylate Synthase Y94f Mutant gi|99032325|pdb|2FTO|X Chain X, Y94f Mutant Of Thymidylate Synthase Bound To Thymidine-5'- Phosphate And 10-Propargyl-5,8-Dideazafolid Acid Length = 264 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 200/262 (76%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP++G QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVFGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|9955004|pdb|1FFL|A Chain A, Crystal Structure Of The Apo-Thymidylate Synthase R166q Mutant gi|39654046|pdb|1FWM|A Chain A, Crystal Structure Of The Thymidylate Synthase R166q Mutant gi|39654047|pdb|1FWM|B Chain B, Crystal Structure Of The Thymidylate Synthase R166q Mutant Length = 264 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 200/262 (76%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQ+S DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQQSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|313808492|gb|EFS46957.1| thymidylate synthase [Propionibacterium acnes HL087PA2] Length = 270 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD G IDQI+ +V+ +R Sbjct: 61 WFLRGDTNVGWLHDNSIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV D G LSCQLYQRSGD FLG+ Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270 >gi|254447388|ref|ZP_05060854.1| thymidylate synthase [gamma proteobacterium HTCC5015] gi|198262731|gb|EDY87010.1| thymidylate synthase [gamma proteobacterium HTCC5015] Length = 277 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 156/277 (56%), Positives = 205/277 (74%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G + DRTG GT S FG+QMRFDLS+GFP++TTKK+H +S+VHELL Sbjct: 1 MKQYLELMQRVLDEGVRKDDRTGTGTLSVFGHQMRFDLSQGFPMVTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL +GVSIWDEWA ++G+LGP+YG QWRSW +G V+DQI ++ ++ Sbjct: 61 WFLKGETNIAYLKDNGVSIWDEWATEEGDLGPVYGKQWRSWEGPNGEVVDQIEQLIHDIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN AL+ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 121 TNPDSRRLMVSAWNPALLPDTRKAPHENAADGKQALPPCHTLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GDVFLG+PFNIASY+LLT M+A V + G+FIHTLGD HLY+NH EQ LQLSR P L Sbjct: 181 GDVFLGVPFNIASYALLTCMVAQVCDLEVGDFIHTLGDAHLYSNHMEQTQLQLSRDPLPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ +NP + ++ F ++D + Y+ H I A V+V Sbjct: 241 PRLKLNPAVKNIFEFTFDDIEVVDYQSHPHIKAPVAV 277 >gi|183981970|ref|YP_001850261.1| thymidylate synthase ThyA [Mycobacterium marinum M] gi|183175296|gb|ACC40406.1| thymidylate synthase ThyA [Mycobacterium marinum M] Length = 266 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG Q+R+DL GFPLLTTKKVH+KSVV+ELLWFL Sbjct: 7 YEDLLRRVLETGTAKSDRTGTGTRSLFGQQIRYDLGCGFPLLTTKKVHFKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +HGV+IWDEWA + G+LGPIYGVQWRSWP G IDQIS+ ++ LR DP Sbjct: 67 RGDSNVGWLQQHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISAALELLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGQIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y NH EQ QL R PR P++ ++ + + Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYGNHVEQVTEQLRREPRPYPKLSLSQRD-SIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED ++ Y+PH AI A V+V Sbjct: 246 YEDVVVQDYDPHPAIKAPVAV 266 >gi|289427821|ref|ZP_06429530.1| thymidylate synthase [Propionibacterium acnes J165] gi|295131194|ref|YP_003581857.1| thymidylate synthase [Propionibacterium acnes SK137] gi|289159003|gb|EFD07198.1| thymidylate synthase [Propionibacterium acnes J165] gi|291375426|gb|ADD99280.1| thymidylate synthase [Propionibacterium acnes SK137] gi|313773259|gb|EFS39225.1| thymidylate synthase [Propionibacterium acnes HL074PA1] gi|313793458|gb|EFS41509.1| thymidylate synthase [Propionibacterium acnes HL110PA1] gi|313801143|gb|EFS42406.1| thymidylate synthase [Propionibacterium acnes HL110PA2] gi|313812065|gb|EFS49779.1| thymidylate synthase [Propionibacterium acnes HL083PA1] gi|313819227|gb|EFS56941.1| thymidylate synthase [Propionibacterium acnes HL046PA2] gi|313821101|gb|EFS58815.1| thymidylate synthase [Propionibacterium acnes HL036PA1] gi|313823473|gb|EFS61187.1| thymidylate synthase [Propionibacterium acnes HL036PA2] gi|313827024|gb|EFS64738.1| thymidylate synthase [Propionibacterium acnes HL063PA1] gi|313829862|gb|EFS67576.1| thymidylate synthase [Propionibacterium acnes HL007PA1] gi|313834704|gb|EFS72418.1| thymidylate synthase [Propionibacterium acnes HL056PA1] gi|313837927|gb|EFS75641.1| thymidylate synthase [Propionibacterium acnes HL086PA1] gi|314925914|gb|EFS89745.1| thymidylate synthase [Propionibacterium acnes HL036PA3] gi|314960889|gb|EFT04990.1| thymidylate synthase [Propionibacterium acnes HL002PA2] gi|314963347|gb|EFT07447.1| thymidylate synthase [Propionibacterium acnes HL082PA1] gi|314974024|gb|EFT18120.1| thymidylate synthase [Propionibacterium acnes HL053PA1] gi|314975450|gb|EFT19545.1| thymidylate synthase [Propionibacterium acnes HL045PA1] gi|314979451|gb|EFT23545.1| thymidylate synthase [Propionibacterium acnes HL072PA2] gi|314984210|gb|EFT28302.1| thymidylate synthase [Propionibacterium acnes HL005PA1] gi|314988435|gb|EFT32526.1| thymidylate synthase [Propionibacterium acnes HL005PA2] gi|314988646|gb|EFT32737.1| thymidylate synthase [Propionibacterium acnes HL005PA3] gi|315079373|gb|EFT51371.1| thymidylate synthase [Propionibacterium acnes HL053PA2] gi|315079992|gb|EFT51968.1| thymidylate synthase [Propionibacterium acnes HL078PA1] gi|315083399|gb|EFT55375.1| thymidylate synthase [Propionibacterium acnes HL027PA2] gi|315086806|gb|EFT58782.1| thymidylate synthase [Propionibacterium acnes HL002PA3] gi|315089453|gb|EFT61429.1| thymidylate synthase [Propionibacterium acnes HL072PA1] gi|315097776|gb|EFT69752.1| thymidylate synthase [Propionibacterium acnes HL038PA1] gi|327325399|gb|EGE67204.1| thymidylate synthase [Propionibacterium acnes HL096PA2] gi|327328262|gb|EGE70026.1| thymidylate synthase [Propionibacterium acnes HL096PA3] gi|327443692|gb|EGE90346.1| thymidylate synthase [Propionibacterium acnes HL043PA1] gi|327449229|gb|EGE95883.1| thymidylate synthase [Propionibacterium acnes HL043PA2] gi|327450177|gb|EGE96831.1| thymidylate synthase [Propionibacterium acnes HL013PA2] gi|327451241|gb|EGE97895.1| thymidylate synthase [Propionibacterium acnes HL092PA1] gi|328756767|gb|EGF70383.1| thymidylate synthase [Propionibacterium acnes HL020PA1] gi|328761041|gb|EGF74593.1| thymidylate synthase [Propionibacterium acnes HL099PA1] gi|332676071|gb|AEE72887.1| thymidylate synthase [Propionibacterium acnes 266] Length = 270 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD G IDQI+ +V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV D G LSCQLYQRSGD FLG+ Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270 >gi|30352180|gb|AAP31579.1| thymidylate synthase [Shigella flexneri] Length = 264 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 151/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH + V+IWD+WAD++G+LGP++G QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIGYLHENNVTIWDDWADENGDLGPVFGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY NH +Q LQLSR PR LP++II + Sbjct: 181 YTLLVHMMAQQCDLEVGDFVWTGGDTHLYTNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|157834047|pdb|1TYS|A Chain A, Water-Mediated Substrate(Slash)product Discrimination: The Product Complex Of Thymidylate Synthase At 1.83 Angstroms Length = 265 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 2 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL P H FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 122 NDPDSRRIIVSAWNVGELDKMALAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 181 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 241 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 DYRFEDFEIEGYDPHPGIKAPVAI 265 >gi|2624566|pdb|1AIQ|A Chain A, Crystal Structure Of Thymidylate Synthase R126e Mutant gi|2624567|pdb|1AIQ|B Chain B, Crystal Structure Of Thymidylate Synthase R126e Mutant gi|157829911|pdb|1AJM|A Chain A, Crystal Structure Of Thymidylate Synthase R126e Mutant Length = 264 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 199/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P S R IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSERIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|260579743|ref|ZP_05847601.1| thymidylate synthase [Corynebacterium jeikeium ATCC 43734] gi|258602129|gb|EEW15448.1| thymidylate synthase [Corynebacterium jeikeium ATCC 43734] Length = 273 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 159/261 (60%), Positives = 197/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ G+ + DRTG GT S FG Q+R+DLS GFPL+TTK VH KSVV ELLWFL Sbjct: 14 YEDLLREILETGTPKGDRTGTGTTSLFGRQIRYDLSAGFPLITTKSVHVKSVVGELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +G+ IW+EWAD++G+LGP+YGVQWRSWP +G IDQI+ +++LR +P Sbjct: 74 RGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPNGQHIDQIAGALETLRTNP 133 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 134 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 193 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEFI T GD H+Y+NH EQ LQLSR R PQ+ +N D+ S+ Sbjct: 194 LTHMFAQQSGLEVGEFIWTGGDCHIYDNHVEQVQLQLSRDARPYPQLKLN-KAADMFSYD 252 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + D Y+PH I AKV+V Sbjct: 253 FSDIEFTGYDPHPVIKAKVAV 273 >gi|281602182|gb|ADA75166.1| Thymidylate synthase [Shigella flexneri 2002017] Length = 264 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 151/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S F +QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFVHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH + A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGVKAPVAI 264 >gi|93279927|pdb|2G8M|A Chain A, Escherichia Coli Thymidylate Synthase Y209w In Complex With Substrate, Dump, And A Cofactor Analog, Cb3717 gi|93279928|pdb|2G8M|B Chain B, Escherichia Coli Thymidylate Synthase Y209w In Complex With Substrate, Dump, And A Cofactor Analog, Cb3717 gi|93279931|pdb|2G8X|A Chain A, Escherichia Coli Y209w Apoprotein gi|93279932|pdb|2G8X|B Chain B, Escherichia Coli Y209w Apoprotein Length = 264 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 200/262 (76%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HL++NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLWSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|238758887|ref|ZP_04620059.1| Thymidylate synthase [Yersinia aldovae ATCC 35236] gi|238702844|gb|EEP95389.1| Thymidylate synthase [Yersinia aldovae ATCC 35236] Length = 264 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G LGP+YG QWR+W DG IDQ+S++V+ L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGSLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A +++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPIAI 264 >gi|319944036|ref|ZP_08018316.1| thymidylate synthase [Lautropia mirabilis ATCC 51599] gi|319742797|gb|EFV95204.1| thymidylate synthase [Lautropia mirabilis ATCC 51599] Length = 264 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 158/264 (59%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G + DRTG GT S FG+QMRF L+ GFPLLTTKK+H +S++HELL Sbjct: 1 MKTYLDLLDHVLTHGVRKEDRTGTGTLSVFGHQMRFPLADGFPLLTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD +G LGP+YG QWRSWP DG IDQIS +V+ +R Sbjct: 61 WFLKGDTNIGYLRDNGVTIWDEWADAEGNLGPVYGAQWRSWPTPDGQHIDQISRVVEDIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV + MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RSPDSRRLIVSAWNVGELPHMALPPCHALFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GEFI T GD HLY NH +QA LQLSR+PR LP++ + + Sbjct: 181 YALLTHMVAQQTDLEPGEFIWTGGDCHLYLNHLDQARLQLSRTPRALPRLKLARRPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+P I A ++V Sbjct: 241 DYRFEDFVIEDYDPWPGIKAPIAV 264 >gi|20150422|pdb|1JG0|A Chain A, Crystal Structure Of Escherichia Coli Thymidylate Synthase Complexed With 2'-Deoxyuridine-5'-Monophosphate And N,O- Didansyl-L-Tyrosine gi|20150423|pdb|1JG0|B Chain B, Crystal Structure Of Escherichia Coli Thymidylate Synthase Complexed With 2'-Deoxyuridine-5'-Monophosphate And N,O- Didansyl-L-Tyrosine Length = 264 Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 199/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + D TG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDATGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGAHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|5107510|pdb|1BQ1|A Chain A, E. Coli Thymidylate Synthase Mutant N177a In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|5107511|pdb|1BQ1|B Chain B, E. Coli Thymidylate Synthase Mutant N177a In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|157830434|pdb|1BQ2|A Chain A, E. Coli Thymidylate Synthase Mutant N177a Length = 264 Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 199/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PF IASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFAIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|271966278|ref|YP_003340474.1| Thymidylate synthase [Streptosporangium roseum DSM 43021] gi|270509453|gb|ACZ87731.1| Thymidylate synthase [Streptosporangium roseum DSM 43021] Length = 265 Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 161/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLR V+ G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH +S+V+ELLWF Sbjct: 5 QYEDLLRLVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLRSIVYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSN+ +LH+HGV+IWDEWAD +GELGP+YG QWRSWP DG IDQ+S ++ +LR D Sbjct: 65 LRGDSNIGWLHKHGVTIWDEWADANGELGPVYGAQWRSWPAPDGRHIDQVSEVLDTLRRD 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRMIVSAWNVAELDKMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G + G+FI T GD H+Y+NH EQ QLSR+P P + + L + Sbjct: 185 LLTHMVAQQAGLKPGDFIWTGGDCHIYDNHVEQVTEQLSRTPFEFPGLRLR-QADSLFDY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 Y D + Y H AI A V+V Sbjct: 244 AYADVEVLDYRHHPAIKAPVAV 265 >gi|300785995|ref|YP_003766286.1| thymidylate synthase [Amycolatopsis mediterranei U32] gi|299795509|gb|ADJ45884.1| thymidylate synthase [Amycolatopsis mediterranei U32] Length = 265 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 156/262 (59%), Positives = 203/262 (77%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLRHV+ G+ + DRTG GTRS FG+Q+R+ LS+GFPL+TTKKVH++S+ +ELLWF Sbjct: 5 QYEDLLRHVLDTGARKGDRTGTGTRSIFGHQLRYRLSEGFPLITTKKVHFRSIAYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD+NVS+L HGV+IWDEWA +DG+LGP+YGVQWRSWP DG +DQI+ ++++LR + Sbjct: 65 LRGDANVSWLREHGVTIWDEWAAEDGDLGPVYGVQWRSWPTPDGGHVDQIAEVLRTLREN 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA I +MALPPCH FQF+V +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRIIVSAWNVADIPRMALPPCHAFFQFHVADGKLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT ++A+ +G G+FI T GD H+Y+NH +Q QL+R R P + + P L + Sbjct: 185 LLTHLIAAQVGLGVGDFIWTGGDCHIYDNHVDQVRTQLAREARPFPTLGLKP-ADSLFEY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YE F++ Y+PH I A V+V Sbjct: 244 TYEHFSVEGYDPHPGIKAPVAV 265 >gi|215794567|pdb|3BFI|A Chain A, E. Coli Thymidylate Synthase Y209m Mutant Complexed With 5- Nitro-Dump Length = 264 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 199/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HL +NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLMSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|260886113|ref|ZP_05736540.2| thymidylate synthase [Prevotella tannerae ATCC 51259] gi|260850704|gb|EEX70573.1| thymidylate synthase [Prevotella tannerae ATCC 51259] Length = 340 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL + G+ + DRTG GT+S FG+QMRF ++ GFPLLTTKK+H KS++HELL Sbjct: 77 MKQYLDLLNEINTHGTVKHDRTGTGTKSIFGHQMRFQMADGFPLLTTKKLHVKSIIHELL 136 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RG++N+ L GVSIWDEWAD++G+LGPIYG QWR WPD G IDQ++ V+ ++ Sbjct: 137 WFIRGETNIKSLKEAGVSIWDEWADENGDLGPIYGYQWRHWPDGRGGEIDQLAQAVELIK 196 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV I++M LPPCH LFQ+YV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 197 HKPDSRRIIVSAWNVGDIERMKLPPCHILFQYYVADGRLSLQLYQRSADTFLGVPFNIAS 256 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM A V + G+FI+T GD HLY NH EQA LQL+R+P LP M +NP L Sbjct: 257 YALLLMMTAQVTDLEPGDFIYTTGDTHLYLNHLEQARLQLTRTPGLLPTMRLNPERRRLE 316 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y P I A VSV Sbjct: 317 DFRYEDFELIDYNPQPHIAAPVSV 340 >gi|27574165|pdb|1NCE|A Chain A, Crystal Structure Of A Ternary Complex Of E. Coli Thymidylate Synthase D169c With Dump And The Antifolate Cb3717 gi|27574166|pdb|1NCE|B Chain B, Crystal Structure Of A Ternary Complex Of E. Coli Thymidylate Synthase D169c With Dump And The Antifolate Cb3717 Length = 264 Score = 338 bits (868), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 199/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS VFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCCVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|124003691|ref|ZP_01688539.1| thymidylate synthase [Microscilla marina ATCC 23134] gi|123990746|gb|EAY30213.1| thymidylate synthase [Microscilla marina ATCC 23134] Length = 264 Score = 338 bits (867), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 193/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV++ G + DRTG GT S FGYQMRF+L+ GFPL+TTKK+H +SV+HELL Sbjct: 1 MQQYTDLVQHVLENGVRKGDRTGTGTLSVFGYQMRFNLADGFPLVTTKKIHLRSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD DG LG +YG QWRSW G +DQI++++ ++ Sbjct: 61 WFLKGDTNIRYLQDNGVTIWDEWADDDGNLGSVYGAQWRSWQTATGETVDQITNLINQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV IDKMALPPCH +FQFYV GKLSCQLYQRS D+ LGIPFNIAS Sbjct: 121 RNPNSRRLMVSAWNVGEIDKMALPPCHTMFQFYVAEGKLSCQLYQRSADIGLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD H+Y NH + Q+ R P LP++ +N + DL Sbjct: 181 YALLLEMVAQVTGLKAGEFIHTFGDAHIYANHEKALREQIQRKPYALPRLELNSEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YED + Y+ H I V+V Sbjct: 241 KFTYEDIKVVDYQYHPMIKLPVAV 264 >gi|284033838|ref|YP_003383769.1| thymidylate synthase [Kribbella flavida DSM 17836] gi|283813131|gb|ADB34970.1| thymidylate synthase [Kribbella flavida DSM 17836] Length = 263 Score = 338 bits (867), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 157/265 (59%), Positives = 200/265 (75%), Gaps = 3/265 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL HV+ G ++ DRTG GT S FG+Q R+DLS GFP++TTKK+H KSVV EL+ Sbjct: 1 MRQYLELLDHVLTHGVEKGDRTGTGTLSVFGHQARYDLSAGFPVVTTKKLHLKSVVGELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G ++V +L +G+SIWDEWA DGELGP+YG QWRSWP DG +DQI+ +++++R Sbjct: 61 WFLSGSTSVKWLQENGISIWDEWAGDDGELGPVYGYQWRSWPTPDGRHVDQIAGVIEAIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRH+VSAWNVA +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRHLVSAWNVAELDDMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP-NIVDL 239 Y+LLT M+A G G+F+HTLGD HLY NH +QA LQL+R PR LP + + + +D Sbjct: 181 YALLTHMVAQQTGLAVGDFVHTLGDAHLYLNHVDQAKLQLTREPRPLPTLRLRERDSID- 239 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 S+ D L Y+PH I A ++V Sbjct: 240 -SYEIADVELIGYDPHPGIKAPIAV 263 >gi|220913475|ref|YP_002488784.1| thymidylate synthase [Arthrobacter chlorophenolicus A6] gi|219860353|gb|ACL40695.1| Thymidylate synthase [Arthrobacter chlorophenolicus A6] Length = 267 Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 155/261 (59%), Positives = 198/261 (75%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GT S FG Q+RFDL++GFPL+TTK+VH+KSV ELLWFL Sbjct: 7 YEDLLRDVLAQGTHKSDRTGTGTTSVFGRQIRFDLAEGFPLITTKRVHFKSVAVELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV ++ GV+IW+EWAD+DG+LGP+YGVQWRSWP DG IDQI+ +V++L+A+P Sbjct: 67 RGETNVKWMQDQGVTIWNEWADEDGDLGPVYGVQWRSWPTPDGGHIDQIAELVENLKANP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHIVSAWNV+ ++ MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRHIVSAWNVSELNDMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA +G + GEF+ T GDVH+Y NH +Q QL R P PQ+ IN + + Sbjct: 187 LTYMLAQQVGLEPGEFVWTGGDVHIYENHMDQVLKQLEREPYEYPQLKINRKPASIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 EDF + Y+ H I A ++V Sbjct: 247 LEDFEVVGYKHHPTIKAPIAV 267 >gi|296139474|ref|YP_003646717.1| thymidylate synthase [Tsukamurella paurometabola DSM 20162] gi|296027608|gb|ADG78378.1| thymidylate synthase [Tsukamurella paurometabola DSM 20162] Length = 265 Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 159/263 (60%), Positives = 201/263 (76%), Gaps = 5/263 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ R DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KS+ +ELLWFL Sbjct: 6 YEDLLRDVLANGTHRPDRTGTGTRSVFGRQLRYDLSEGFPLITTKRVHMKSIAYELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L HGV+IWDEWAD +GELGP+YGVQWRSWP +G IDQI++ ++ L+ DP Sbjct: 66 RGDSNVRWLQEHGVTIWDEWADANGELGPVYGVQWRSWPTPNGEHIDQIATAIELLKTDP 125 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ I+ MALPPCH FQFY +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 126 SSRRNIVSAWNVSEIENMALPPCHAFFQFYAADGKLSCQLYQRSADLFLGVPFNIASYAL 185 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII--NPNIVDLLS 241 LT M+A+ +G + G+F+ T GD H+Y+NH EQ QLSR P P++ + P+I D Sbjct: 186 LTHMVAAQVGLEPGDFVWTGGDCHIYDNHVEQVTEQLSREPYPYPRLELAERPSIFD--- 242 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + Y D T+ Y+ H AI A V+V Sbjct: 243 YEYGDITVHDYQHHPAIKAPVAV 265 >gi|238796578|ref|ZP_04640085.1| Thymidylate synthase [Yersinia mollaretii ATCC 43969] gi|238719556|gb|EEQ11365.1| Thymidylate synthase [Yersinia mollaretii ATCC 43969] Length = 264 Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S++V+ L+ Sbjct: 61 WFLNGDTNIGYLKENSVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLIHMMAQQCDLEVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH I A +++ Sbjct: 241 DYHFDDFEIEGYDPHPGIKAPIAI 264 >gi|138895327|ref|YP_001125780.1| thymidylate synthase [Geobacillus thermodenitrificans NG80-2] gi|166231703|sp|A4INY1|TYSY_GEOTN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|134266840|gb|ABO67035.1| Thymidylate synthase,TS, TSase [Geobacillus thermodenitrificans NG80-2] Length = 264 Score = 338 bits (866), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 151/264 (57%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL +++ G ++ DRTGVGT S FG Q+RF+L GFPL+TTKK+H +S+++ELL Sbjct: 1 MRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGP+YG QWRSW DG +DQI+S+V+ ++ Sbjct: 61 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQIASVVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWNVA +DKM LPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 121 RNPNSRRLLVNAWNVAELDKMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G GE I T GDVHLY NH EQA LQL+R PR LP++++ + Sbjct: 181 YALLTHMIAEQCGLDVGELIFTGGDVHLYKNHIEQAKLQLTREPRPLPKLVLKRKPSSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF + Y+PH I A V+V Sbjct: 241 DYEYDDFEIVGYDPHPTIKAPVAV 264 >gi|217035336|pdb|3BGX|A Chain A, E. Coli Thymidylate Synthase C146s Mutant Complexed With Dtmp And Mtf Length = 264 Score = 338 bits (866), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 199/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL P H FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|332527154|ref|ZP_08403229.1| thymidylate synthase [Rubrivivax benzoatilyticus JA2] gi|332111580|gb|EGJ11562.1| thymidylate synthase [Rubrivivax benzoatilyticus JA2] Length = 273 Score = 337 bits (865), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 159/262 (60%), Positives = 192/262 (73%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT+S FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF Sbjct: 12 QYEDFMRHVDTTGVHKSDRTGTGTKSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD N +L GV+IWDEWA +DG+LGP+YGVQWRSWP DG +DQI+ V+ L+ D Sbjct: 72 LRGDGNARWLQERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHVDQIAEAVRLLKTD 131 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNVA + KMAL PCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 132 PDSRRIVVSAWNVAELPKMALMPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIASYA 191 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLTMM+A Q G+FI T GD HLY+NH EQ QL+R+P P M I + + Sbjct: 192 LLTMMMAQQCDLQLGDFIWTGGDCHLYSNHAEQVRTQLARTPFPYPTMEIRRRPASIFDY 251 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YEDF L Y+ H AI A V+V Sbjct: 252 EYEDFVLHDYQHHPAIKAPVAV 273 >gi|160872451|ref|ZP_02062583.1| thymidylate synthase [Rickettsiella grylli] gi|159121250|gb|EDP46588.1| thymidylate synthase [Rickettsiella grylli] Length = 264 Score = 337 bits (865), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 191/264 (72%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLD L H++K G + DRTG GT STFGYQMRFDL++GFPLLTTKK+H KSV+HELL Sbjct: 1 MRVYLDFLHHILKKGQPKIDRTGTGTLSTFGYQMRFDLNRGFPLLTTKKIHLKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL+ H VSIWDEWAD G LGPIYG QWRSWP + IDQ+S+++Q + Sbjct: 61 WFLRGDTNIHYLNAHQVSIWDEWADSKGNLGPIYGKQWRSWPTTNDQSIDQLSTLIQQIN 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV + KMALPPCH LFQFYV N +LSCQLYQRS D FLG+PFNIAS Sbjct: 121 VNPDSRRLIVSAWNVGELKKMALPPCHLLFQFYVANDQLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GEFI T GD H+Y NH EQ QL+R P PQ+ I L Sbjct: 181 YALLTQMIAQQCHLKVGEFIWTGGDCHIYCNHLEQVHCQLARQPYLAPQLKILRKPKTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF + Y H AI A V+V Sbjct: 241 DYVYDDFLVTDYHYHPAIKAPVAV 264 >gi|148747783|ref|YP_001285862.1| putative thymidylate synthase [Geobacillus virus E2] gi|113715725|gb|ABI36874.1| putative thymidylate synthase [Geobacillus virus E2] Length = 264 Score = 337 bits (865), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ +++ G ++ DRTGVGT S FG Q+RF+L GFPL+TTKK+H +S+++ELL Sbjct: 1 MKQYLDLLQDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGPIYG QWRSW DG IDQI+ +V+ ++ Sbjct: 61 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTIDQIAWVVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P+SRR +VSAWNVA +D+M LPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 121 RNPHSRRLLVSAWNVAELDEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A GE I T GDVHLY NH EQA LQL+R PR LP++++ + Sbjct: 181 YALLTHMVAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVLKRKPPSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF + Y+PH AI A V+V Sbjct: 241 DYEYDDFEIVGYDPHPAIKAPVAV 264 >gi|21730590|pdb|1KZJ|A Chain A, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX gi|21730591|pdb|1KZJ|B Chain B, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX gi|21730592|pdb|1KZJ|C Chain C, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX gi|21730593|pdb|1KZJ|D Chain D, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX gi|21730594|pdb|1KZJ|E Chain E, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX gi|21730595|pdb|1KZJ|F Chain F, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX Length = 264 Score = 337 bits (865), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 151/262 (57%), Positives = 199/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+I DEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIGDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|196249232|ref|ZP_03147931.1| Thymidylate synthase [Geobacillus sp. G11MC16] gi|196211461|gb|EDY06221.1| Thymidylate synthase [Geobacillus sp. G11MC16] Length = 284 Score = 337 bits (864), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 150/264 (56%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 + QYL LL +++ G ++ DRTGVGT S FG Q+RF+L GFPL+TTKK+H +S+++ELL Sbjct: 21 LRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 80 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGP+YG QWRSW DG +DQI+S+V+ ++ Sbjct: 81 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQIASVVEEIK 140 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWNVA +DKM LPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 141 RNPNSRRLLVNAWNVAELDKMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 200 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G GE I T GDVHLY NH EQA LQL+R PR LP++++ + Sbjct: 201 YALLTHMIAEQCGLDVGELIFTGGDVHLYKNHIEQAKLQLTREPRPLPKLVLKRKPSSIF 260 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF + Y+PH I A V+V Sbjct: 261 DYEYDDFEIVGYDPHPTIKAPVAV 284 >gi|319442559|ref|ZP_07991715.1| thymidylate synthase [Corynebacterium variabile DSM 44702] Length = 270 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 156/261 (59%), Positives = 200/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL +++ G + DRTG GTRS F QMRFDL++GFPL+TTKKVH S+V ELLWFL Sbjct: 11 YEDLLAEILEHGVHKDDRTGTGTRSLFARQMRFDLAEGFPLITTKKVHLHSIVGELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSN+++LH + VSIWDEWAD+DGELGP+YGVQWRSWP DG IDQI++ +++L+ +P Sbjct: 71 RGDSNIAWLHENKVSIWDEWADEDGELGPVYGVQWRSWPTPDGRHIDQITAALETLKNNP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY++ Sbjct: 131 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAI 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEF+ T GD H+Y+NH +Q LQLSR R P + ++ DL S+R Sbjct: 191 LTHMFAQQAGLEVGEFVWTGGDCHIYDNHVDQVALQLSREARPYPTLNLH-KAADLFSYR 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y+PH I A V+V Sbjct: 250 FDDIEVIGYDPHPGIKAPVAV 270 >gi|238783710|ref|ZP_04627730.1| Thymidylate synthase [Yersinia bercovieri ATCC 43970] gi|238715423|gb|EEQ07415.1| Thymidylate synthase [Yersinia bercovieri ATCC 43970] Length = 264 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S++V+ L+ Sbjct: 61 WFLNGDTNIGYLKENSVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLIHMMAQQCDLDVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH I A +++ Sbjct: 241 DYHFDDFEIEGYDPHPGIKAPIAI 264 >gi|7766861|pdb|1EVF|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli Length = 264 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 150/262 (57%), Positives = 199/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL P H FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRTXDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|313812335|gb|EFS50049.1| thymidylate synthase [Propionibacterium acnes HL025PA1] Length = 269 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 7/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD G IDQI+ +V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPD-GGGTIDQIAKVVEQIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV D G LSCQLYQRSGD FLG+ Sbjct: 120 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 240 NVRDIDGFELSDITLTGYDPYPALPAPIAV 269 >gi|305664605|ref|YP_003860892.1| thymidylate synthase [Maribacter sp. HTCC2170] gi|88708622|gb|EAR00858.1| thymidylate synthase [Maribacter sp. HTCC2170] Length = 274 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 160/277 (57%), Positives = 206/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+ V+K G + DRTG GT S FG+QMRFDLS+GFP++TTKK+H KS+VHELL Sbjct: 1 MKQYHDLLKQVLKDGCQKGDRTGTGTLSVFGHQMRFDLSEGFPMVTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL +GV IW+EWAD+ G+LGP+YG QWR+W + IDQI +V SL+ Sbjct: 61 WFLKGETNIAYLQENGVRIWNEWADEKGDLGPVYGHQWRNW---NSEEIDQIKEVVHSLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVGNGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ GEFIH GD H+YNNH EQ +LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEPGEFIHAFGDAHIYNNHMEQVELQLSREPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M+INP + D+ F+++DF+L Y PH I V+V Sbjct: 238 PKMVINPEVKDIFDFKFDDFSLVDYNPHPHIKGVVAV 274 >gi|22127047|ref|NP_670470.1| thymidylate synthase [Yersinia pestis KIM 10] gi|45442641|ref|NP_994180.1| thymidylate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108806482|ref|YP_650398.1| thymidylate synthase [Yersinia pestis Antiqua] gi|108813148|ref|YP_648915.1| thymidylate synthase [Yersinia pestis Nepal516] gi|145598984|ref|YP_001163060.1| thymidylate synthase [Yersinia pestis Pestoides F] gi|150260199|ref|ZP_01916927.1| thymidylate synthase [Yersinia pestis CA88-4125] gi|162419494|ref|YP_001607589.1| thymidylate synthase [Yersinia pestis Angola] gi|165924834|ref|ZP_02220666.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939038|ref|ZP_02227590.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|166010315|ref|ZP_02231213.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212711|ref|ZP_02238746.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|167399795|ref|ZP_02305313.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418797|ref|ZP_02310550.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425231|ref|ZP_02316984.1| thymidylate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470394|ref|ZP_02335098.1| thymidylate synthase [Yersinia pestis FV-1] gi|218927963|ref|YP_002345838.1| thymidylate synthase [Yersinia pestis CO92] gi|229837721|ref|ZP_04457881.1| thymidylate synthetase [Yersinia pestis Pestoides A] gi|229840685|ref|ZP_04460844.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842759|ref|ZP_04462913.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229903591|ref|ZP_04518704.1| thymidylate synthetase [Yersinia pestis Nepal516] gi|270487374|ref|ZP_06204448.1| thymidylate synthase [Yersinia pestis KIM D27] gi|294503029|ref|YP_003567091.1| thymidylate synthase [Yersinia pestis Z176003] gi|20455349|sp|Q8ZHV1|TYSY_YERPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|122979996|sp|Q1CFB5|TYSY_YERPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123245978|sp|Q1CAR9|TYSY_YERPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231745|sp|A4TLC5|TYSY_YERPP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|21960098|gb|AAM86721.1|AE013918_5 thymidylate synthetase [Yersinia pestis KIM 10] gi|45437506|gb|AAS63057.1| thymidylate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108776796|gb|ABG19315.1| thymidylate synthase [Yersinia pestis Nepal516] gi|108778395|gb|ABG12453.1| thymidylate synthase [Yersinia pestis Antiqua] gi|115346574|emb|CAL19455.1| thymidylate synthase [Yersinia pestis CO92] gi|145210680|gb|ABP40087.1| thymidylate synthase [Yersinia pestis Pestoides F] gi|149289607|gb|EDM39684.1| thymidylate synthase [Yersinia pestis CA88-4125] gi|162352309|gb|ABX86257.1| thymidylate synthase [Yersinia pestis Angola] gi|165912994|gb|EDR31619.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|165923034|gb|EDR40185.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990801|gb|EDR43102.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166206003|gb|EDR50483.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962791|gb|EDR58812.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050503|gb|EDR61911.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055631|gb|EDR65415.1| thymidylate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679361|gb|EEO75464.1| thymidylate synthetase [Yersinia pestis Nepal516] gi|229690239|gb|EEO82294.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229697051|gb|EEO87098.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704098|gb|EEO91110.1| thymidylate synthetase [Yersinia pestis Pestoides A] gi|262361065|gb|ACY57786.1| thymidylate synthase [Yersinia pestis D106004] gi|262365008|gb|ACY61565.1| thymidylate synthase [Yersinia pestis D182038] gi|270335878|gb|EFA46655.1| thymidylate synthase [Yersinia pestis KIM D27] gi|294353488|gb|ADE63829.1| thymidylate synthase [Yersinia pestis Z176003] gi|320014147|gb|ADV97718.1| thymidylate synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 264 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G+LGPIYG QWR+W DG IDQ+S++V L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGDLGPIYGKQWRAWGAADGRKIDQLSNVVNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH +QA LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQAHLQLSREPRVLPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH I A +++ Sbjct: 241 DYHFDDFDIEGYDPHPGIKAPIAI 264 >gi|319763676|ref|YP_004127613.1| thymidylate synthase [Alicycliphilus denitrificans BC] gi|330824059|ref|YP_004387362.1| thymidylate synthase [Alicycliphilus denitrificans K601] gi|317118237|gb|ADV00726.1| thymidylate synthase [Alicycliphilus denitrificans BC] gi|329309431|gb|AEB83846.1| thymidylate synthase [Alicycliphilus denitrificans K601] Length = 271 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 192/264 (72%), Gaps = 1/264 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DL+RHV + G + DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS++ ELLW Sbjct: 8 HQYEDLMRHVFEHGVAKGDRTGTGTRSVFGHQMRFDLREGFPLVTTKKVHLKSIILELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 FL+G N +L GV+IWDEWAD G+LGP+YGVQWRSWP G IDQIS +V+ LR Sbjct: 68 FLQGSGNARWLQERGVTIWDEWADPTSGDLGPVYGVQWRSWPTPGGGHIDQISQVVEQLR 127 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +DKMAL PCH FQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 128 TNPDSRRIIVSAWNVAELDKMALMPCHAFFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 187 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA + G+FI T GD H+Y+NHFEQ QL+R PR P + I + Sbjct: 188 YALLTHMLAQQCDLEVGDFIWTGGDCHIYSNHFEQVRTQLAREPRPYPTLRIKRRPPSIF 247 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF + Y+PH I A V+V Sbjct: 248 DYGYEDFEVEGYDPHPPIKAPVAV 271 >gi|300932648|ref|ZP_07147904.1| thymidylate synthase [Corynebacterium resistens DSM 45100] Length = 278 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 154/261 (59%), Positives = 199/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ G+ + DRTG GT S FG Q+R+DL +GFPL+TTKKVH KSVV ELLWFL Sbjct: 19 YEDLLREILETGAPKGDRTGTGTSSLFGRQIRYDLQQGFPLITTKKVHVKSVVGELLWFL 78 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +GDSNV +L +G+ IW+EWAD++G+LGP+YGVQWRSWP DG +DQI++ +++L+A+P Sbjct: 79 KGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPDGRHVDQIAAALETLKANP 138 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 139 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 198 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G GEFI T GD H+Y+NH EQ + QL+R PR P + +N D+ S+ Sbjct: 199 LTHMFAQQAGLDVGEFIWTGGDCHIYDNHREQVETQLTRDPRPYPTLELN-KAADMFSYD 257 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + D Y+PH I A+V+V Sbjct: 258 FSDIHFAGYDPHPTIKAQVAV 278 >gi|292493864|ref|YP_003529303.1| thymidylate synthase [Nitrosococcus halophilus Nc4] gi|291582459|gb|ADE16916.1| thymidylate synthase [Nitrosococcus halophilus Nc4] Length = 264 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 158/264 (59%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ G +R DRTG GT S FG+QMRFDL +GFPL+TTKK+H +S+ ELL Sbjct: 1 MKPYLDLIQKILDTGVERDDRTGTGTWSIFGHQMRFDLQQGFPLVTTKKLHVRSIFIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP DG +DQIS +++ +R Sbjct: 61 WFLRGDTNVQYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGRHLDQISKVLEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +PYSRRH+V A+N + +D+MALPPCH LFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPYSRRHMVVAYNPSNVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT ++A + GEFI T GDVHLY NH E A LQL+R P P++ + L Sbjct: 181 YALLTHLMAQQCDLEVGEFIWTGGDVHLYRNHLELARLQLTREPLPPPRLRLKRKPPSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YED + Y+ H I A+VSV Sbjct: 241 EYQYEDLEVVGYQSHPHIKAEVSV 264 >gi|121998826|ref|YP_001003613.1| thymidylate synthase [Halorhodospira halophila SL1] gi|166231707|sp|A1WYP9|TYSY_HALHL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|121590231|gb|ABM62811.1| thymidylate synthase [Halorhodospira halophila SL1] Length = 264 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 189/264 (71%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++HV++ G + DRTG GT S FG+QMRFDL GFPL+TTK+V W+ V ELL Sbjct: 1 MRAYLDLVQHVLEHGHRKEDRTGTGTLSVFGHQMRFDLEAGFPLVTTKRVFWRGVAEELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RG +N L GV IW WAD DGELGP+YG QWRSW DG IDQ+ ++ LR Sbjct: 61 WFIRGSTNARELEDKGVRIWSPWADPDGELGPVYGAQWRSWRAADGREIDQLQQVLTELR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRRH+VSAWNV +++M LPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QRPDSRRHLVSAWNVGELERMNLPPCHLLFQFYVAEGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A +G + GEFI T GD HLY NH QA QLSR+PR LP + I+P + DL Sbjct: 181 YSLLTHLVARHVGLEVGEFIWTGGDCHLYLNHLAQAREQLSRAPRPLPTLHIDPGVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + RYE L Y+PH + A V+V Sbjct: 241 AVRYEHLRLAGYDPHPKLTAPVAV 264 >gi|297153967|gb|ADI03679.1| thymidylate synthase [Streptomyces bingchenggensis BCW-1] Length = 265 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 160/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLR V+ G+ + DRTG GTRS FG+Q+R+DL++GFPL+TTKKVH +S+V+ELLWF Sbjct: 5 QYEDLLRLVLTSGTAKADRTGTGTRSVFGHQLRYDLAQGFPLITTKKVHLRSIVYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L HG++IWDEWAD +GELGP+YGVQWRSWP DG IDQIS ++ +LR D Sbjct: 65 LRGDSNVGWLREHGITIWDEWADANGELGPVYGVQWRSWPAPDGRHIDQISQVLDTLRRD 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRMIVSAWNVAELPKMALAPCHALFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G + G+F+ T GD H+Y+NH +Q QLSR+P P + + L ++ Sbjct: 185 LLTHMVAQQAGLEPGDFVWTGGDCHIYDNHIKQVTEQLSRTPFEFPGLRLR-QADSLFAY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 Y D L Y H AI A V+V Sbjct: 244 AYADVELLDYRHHPAIKAPVAV 265 >gi|240171163|ref|ZP_04749822.1| thymidylate synthase [Mycobacterium kansasii ATCC 12478] Length = 266 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 162/261 (62%), Positives = 196/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ GS + DRTG GTRS FG Q+R+DLS GFPLLTTKKVH+KSV +ELLWFL Sbjct: 7 YEDLLRLVLETGSAKSDRTGTGTRSLFGQQIRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSN+ +LH+HGV+IWDEWA + G+LGPIYGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNIGWLHQHGVTIWDEWASETGDLGPIYGVQWRSWPAPSGEHIDQISAALNLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGDIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ GEFI T GD H+Y+NH EQ QL R PR P++++ + + Sbjct: 187 LTHMMAAQSDLDVGEFIWTGGDCHIYDNHVEQVRQQLRREPRPYPKLVLVQRD-SIFDYA 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + +Y PH AI A V+V Sbjct: 246 YEDIHVENYHPHPAIKAPVAV 266 >gi|121593609|ref|YP_985505.1| thymidylate synthase [Acidovorax sp. JS42] gi|171769450|sp|A1W5A4|TYSY_ACISJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120605689|gb|ABM41429.1| thymidylate synthase [Acidovorax sp. JS42] Length = 277 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 161/270 (59%), Positives = 194/270 (71%), Gaps = 7/270 (2%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DL+RHV + G+ + DRTG GT+S FG+QMRFDLS+GFPL+TTKKVH KS++ ELLW Sbjct: 8 HQYEDLMRHVFEHGTAKGDRTGTGTKSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGDSNV +L G +IWDEWA DG LGP+YGVQWRSWP DG IDQI ++ +L+ Sbjct: 68 FLRGDSNVRWLQERGCTIWDEWARDDGSLGPVYGVQWRSWPTPDGGHIDQIQQVIDTLKT 127 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGI 174 P SRR IVSAWNVA +D+MAL PCH FQFYV + GKLSCQLYQRS D+FLG+ Sbjct: 128 HPDSRRIIVSAWNVAELDRMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGV 187 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT M+A Q G+FI T GD H+Y+NHFEQ QL+R P P + I Sbjct: 188 PFNIASYALLTHMVAQQCDLQVGDFIWTGGDCHIYSNHFEQVRTQLARQPYAYPTLQIKR 247 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + YE H AI A V+V Sbjct: 248 RPASIFDYAYEDFEVVGYEHHPAIKAPVAV 277 >gi|9257014|pdb|1F4D|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase C146s, L143c Covalently Modified At C143 With N-[tosyl-D- Prolinyl]amino-Ethanethiol gi|9257015|pdb|1F4D|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase C146s, L143c Covalently Modified At C143 With N-[tosyl-D- Prolinyl]amino-Ethanethiol Length = 264 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 150/262 (57%), Positives = 198/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMA P H FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMACAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|295400392|ref|ZP_06810371.1| thymidylate synthase [Geobacillus thermoglucosidasius C56-YS93] gi|312111082|ref|YP_003989398.1| thymidylate synthase [Geobacillus sp. Y4.1MC1] gi|294977667|gb|EFG53266.1| thymidylate synthase [Geobacillus thermoglucosidasius C56-YS93] gi|311216183|gb|ADP74787.1| thymidylate synthase [Geobacillus sp. Y4.1MC1] Length = 264 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 150/264 (56%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ +++ G + DRTG+GT S FG Q+RF+L +GFPLLTTKK+H +S+++ELL Sbjct: 1 MRQYLDLLQDILENGVPKEDRTGIGTFSVFGRQLRFNLQEGFPLLTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL +GV+IWDEWAD++G+LGP+YG QWRSW DG +DQIS +++ ++ Sbjct: 61 WFLRGDTNIRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQISWVIEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWNVA +D+M LPPCH FQFYV +GKLSC QRS D FLG+PFNIAS Sbjct: 121 RNPNSRRLLVNAWNVAELDEMKLPPCHYAFQFYVADGKLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G GE I + GDVHLY NH EQA LQL+R PR LP+++I + Sbjct: 181 YALLTHMIAQQCGLDVGELIFSGGDVHLYKNHIEQAKLQLTREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+PH I A V+V Sbjct: 241 EYKFEDFEIVGYDPHPHIKAPVAV 264 >gi|254496004|ref|ZP_05108907.1| thymidylate synthase [Legionella drancourtii LLAP12] gi|254354753|gb|EET13385.1| thymidylate synthase [Legionella drancourtii LLAP12] Length = 264 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+ YL LL+H+++ G+++ DRTG GT S FGYQMRFDL +GFPL+TTKK+H +S+VHELL Sbjct: 1 MNTYLHLLKHILQQGTEKTDRTGTGTLSVFGYQMRFDLRQGFPLVTTKKLHMRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GVSIWDEWAD +G LGP+YG QWR+WP DG IDQ+S++V ++ Sbjct: 61 WFLKGDTNIAYLKENGVSIWDEWADNNGNLGPVYGKQWRNWPTADGRHIDQLSAVVAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV +++MAL PCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNTLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+FI T GD HLY NH EQA QL R P L + I L Sbjct: 181 YALLTHMVAQQCNLEVGDFIWTGGDCHLYLNHLEQARTQLQREPLPLATLNIQRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF +Y+ H AI A ++V Sbjct: 241 EYVYDDFEFANYQSHPAIKAPIAV 264 >gi|227487755|ref|ZP_03918071.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542399|ref|ZP_03972448.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092257|gb|EEI27569.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181597|gb|EEI62569.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51866] Length = 266 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 162/263 (61%), Positives = 199/263 (75%), Gaps = 5/263 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ G+ + DRTG GT S FG QMRF L++ FPL+TTKKVHWKSVV ELLWFL Sbjct: 7 YEDLLREILEEGAHKDDRTGTGTTSLFGKQMRFHLAEAFPLITTKKVHWKSVVGELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV++LH +GVSIWDEWAD++GELGPIYGVQWRSWP +G IDQI+ ++ L+ DP Sbjct: 67 RGDSNVAWLHENGVSIWDEWADENGELGPIYGVQWRSWPTPNGQHIDQIAGALELLKKDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 127 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVADGKLSCQLYQRSCDMFLGVPFNIASYSL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN--PNIVDLLS 241 LT M A G G+F+ T GD H+Y+NH EQ QLSR PR P++ + P++ D Sbjct: 187 LTHMFAQQAGLDVGDFVWTGGDCHIYDNHREQVREQLSREPRPYPRLDLTRAPSMFD--- 243 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + +E L Y+PH I A V+V Sbjct: 244 YTFEHINLVGYDPHPTIKAPVAV 266 >gi|222110329|ref|YP_002552593.1| thymidylate synthase [Acidovorax ebreus TPSY] gi|221729773|gb|ACM32593.1| thymidylate synthase [Acidovorax ebreus TPSY] Length = 277 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 161/270 (59%), Positives = 194/270 (71%), Gaps = 7/270 (2%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DL+RHV + G+ + DRTG GTRS FG+QMRFDL++GFPL+TTKKVH KS++ ELLW Sbjct: 8 HQYEDLMRHVFEHGTAKGDRTGTGTRSVFGHQMRFDLAEGFPLVTTKKVHLKSIILELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGDSNV +L G +IWDEWA DG LGP+YGVQWRSWP DG IDQI ++ +L+ Sbjct: 68 FLRGDSNVRWLQERGCTIWDEWARDDGSLGPVYGVQWRSWPTPDGGHIDQIQQVIDTLKT 127 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGI 174 P SRR IVSAWNVA +D+MAL PCH FQFYV + GKLSCQLYQRS D+FLG+ Sbjct: 128 HPDSRRIIVSAWNVAELDQMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGV 187 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT M+A Q G+FI T GD H+Y+NHFEQ QL+R P P + I Sbjct: 188 PFNIASYALLTHMVAQQCDLQVGDFIWTGGDCHIYSNHFEQVQTQLARQPYAYPTLQIMR 247 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + YE H AI A V+V Sbjct: 248 RPASIFDYAYEDFEVVGYEHHPAIKAPVAV 277 >gi|258544418|ref|ZP_05704652.1| thymidylate synthase [Cardiobacterium hominis ATCC 15826] gi|258520307|gb|EEV89166.1| thymidylate synthase [Cardiobacterium hominis ATCC 15826] Length = 258 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 159/264 (60%), Positives = 198/264 (75%), Gaps = 6/264 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLRH+++ G+ + DRTG GTRS FGYQMRFDL++GFPLLTTK+VH+KSV +ELL Sbjct: 1 MQTYLDLLRHILEHGAPKADRTGTGTRSVFGYQMRFDLTRGFPLLTTKRVHFKSVAYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +LH HGVSIWDEWAD G+LGP+YG QWR W DQI++++ LR Sbjct: 61 WFLRGDTNIHWLHEHGVSIWDEWADARGDLGPVYGKQWRDW-----GGCDQIANVLDLLR 115 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV + +MAL PCH LFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 116 TDPDSRRMIVSAWNVGELPQMALAPCHALFQFYVAGGRLSCQLYQRSADVFLGVPFNIAS 175 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q GE + T GDVHLYNNH QA+ QL+R P LP + + + + Sbjct: 176 YALLIHMMAQQANLQPGELVWTGGDVHLYNNHLAQAETQLAREPYPLPTLALR-HAPSID 234 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++Y D TL++Y+ H AI A V+V Sbjct: 235 AYQYSDITLQNYQSHPAIPAPVAV 258 >gi|196249495|ref|ZP_03148192.1| Thymidylate synthase [Geobacillus sp. G11MC16] gi|196210789|gb|EDY05551.1| Thymidylate synthase [Geobacillus sp. G11MC16] Length = 264 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR +++ G +R DRTG GT S FG Q+RFDL KGFPLLTTKK+H +S+++ELL Sbjct: 1 MKQYLDLLRDILENGIEREDRTGTGTISVFGRQLRFDLQKGFPLLTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L+ +GV+IWDEWAD++G+LG IYG QWR+W D IDQI+ +V+ ++ Sbjct: 61 WFLRGDTNIRFLNENGVTIWDEWADENGDLGRIYGAQWRAWRTSDSGTIDQITRVVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV +D+MALPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 121 HNPNSRRLLVSAWNVGELDQMALPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GE I + GDVHLY NH EQA LQL+ PR LP++II + Sbjct: 181 YALLTHMVAQQCDLEVGELIFSGGDVHLYKNHVEQAKLQLTHEPRPLPKLIIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF Y+PH AI A +SV Sbjct: 241 DYRYEDFEFVGYDPHPAIKAPISV 264 >gi|7766860|pdb|1EV8|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli Length = 264 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 150/262 (57%), Positives = 198/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL P H FQFYV +GKLSCQLYQR DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRCXDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264 >gi|314968970|gb|EFT13068.1| thymidylate synthase [Propionibacterium acnes HL037PA1] Length = 269 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 7/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG IDQI+++V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPD-DGGTIDQIANVVEQIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA I +MALPPCH LFQFYV D G LSCQLYQRSGD FLG+ Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I D+ F D TL Y+P+ A+ A ++V Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269 >gi|51597348|ref|YP_071539.1| thymidylate synthase [Yersinia pseudotuberculosis IP 32953] gi|153947420|ref|YP_001399968.1| thymidylate synthase [Yersinia pseudotuberculosis IP 31758] gi|170023285|ref|YP_001719790.1| thymidylate synthase [Yersinia pseudotuberculosis YPIII] gi|186896455|ref|YP_001873567.1| thymidylate synthase [Yersinia pseudotuberculosis PB1/+] gi|62901276|sp|Q667F9|TYSY_YERPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166991232|sp|A7FFE0|TYSY_YERP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|51590630|emb|CAH22271.1| thymidylate synthase [Yersinia pseudotuberculosis IP 32953] gi|152958915|gb|ABS46376.1| thymidylate synthase [Yersinia pseudotuberculosis IP 31758] gi|169749819|gb|ACA67337.1| Thymidylate synthase [Yersinia pseudotuberculosis YPIII] gi|186699481|gb|ACC90110.1| thymidylate synthase [Yersinia pseudotuberculosis PB1/+] Length = 264 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 151/264 (57%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G+LGPIYG QWR+W DG IDQ+S++V L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGDLGPIYGKQWRAWGAADGRKIDQLSNVVNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH +Q LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH I A +++ Sbjct: 241 DYHFDDFDIEGYDPHPGIKAPIAI 264 >gi|311744165|ref|ZP_07717970.1| thymidylate synthase [Aeromicrobium marinum DSM 15272] gi|311312520|gb|EFQ82432.1| thymidylate synthase [Aeromicrobium marinum DSM 15272] Length = 269 Score = 335 bits (858), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 151/269 (56%), Positives = 201/269 (74%), Gaps = 5/269 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLD++R ++ G ++ DRTG GT S FG+Q R+DL GFPL+TTK++H SVV ELL Sbjct: 1 MQAYLDIIRRILDEGVEKSDRTGTGTLSVFGHQTRYDLRAGFPLVTTKRIHLPSVVGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ GD+N ++L HGV+IWDEWAD++G+LGP+YG QWRSWP G +DQ++++VQ L Sbjct: 61 WFVSGDTNTAFLREHGVTIWDEWADENGDLGPVYGHQWRSWPTPSGQHVDQLAAVVQQLG 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-----NGKLSCQLYQRSGDVFLGIP 175 DP SRRH+VSAWNVA +D MAL PCH LFQFYV+ G+LSCQLYQRS DVFLG+P Sbjct: 121 VDPDSRRHLVSAWNVADLDAMALAPCHALFQFYVEPRTDGPGRLSCQLYQRSADVFLGVP 180 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A V G + G+F+HTLGD HLY NH +QA QL+R+PR LP + ++P Sbjct: 181 FNIASYALLTHMVAQVAGLEVGDFVHTLGDAHLYLNHLDQAREQLTRAPRPLPDLWLDPQ 240 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + F ++ + Y+PH +I A ++V Sbjct: 241 VDSIDGFGFDSIKVTGYDPHPSIKAPIAV 269 >gi|160900402|ref|YP_001565984.1| thymidylate synthase [Delftia acidovorans SPH-1] gi|160365986|gb|ABX37599.1| Thymidylate synthase [Delftia acidovorans SPH-1] Length = 274 Score = 335 bits (858), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 156/262 (59%), Positives = 194/262 (74%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV + G + DRTG GTRS FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF Sbjct: 13 QYEDFMRHVYEHGVSKTDRTGTGTRSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 72 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L G +IW+EWA +DG+LGP+YGVQWR+WP DG IDQI+ +V+ L+++ Sbjct: 73 LRGDSNVRWLQERGCTIWNEWAREDGDLGPVYGVQWRNWPTPDGGHIDQIAEVVKQLKSN 132 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA + +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 133 PDSRRIIVSAWNVADLPQMALMPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIASYA 192 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT MLA Q G+F+ T GD H+YNNHF Q + QL+R P P + I + + Sbjct: 193 LLTHMLAQQCDLQVGDFVWTGGDCHIYNNHFAQVETQLARQPFAYPTLQIKRRPDSIFGY 252 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YEDF + Y+ H I A V+V Sbjct: 253 EYEDFEVVGYQHHEPIKAPVAV 274 >gi|294478969|gb|ADE87534.1| thymidylate synthase [Deep-sea thermophilic phage D6E] Length = 264 Score = 335 bits (858), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ +++ G ++ DRTG GT S FG Q+RF+L GFPL+TTKK+H +S+++ELL Sbjct: 1 MKQYLDLLQDILENGVEKEDRTGTGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGPIYG QWRSW DG +DQI+++ + ++ Sbjct: 61 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTVDQIAAVFKEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + +M LPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 121 RNPNSRRLLVSAWNVAKLGEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A GE I T GDVHLY NH EQA LQL+R PR LP+++I + Sbjct: 181 YALLTHMVAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPPSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF Y+PH AI A VSV Sbjct: 241 DYEYEDFEFVGYDPHPAIKAPVSV 264 >gi|289209065|ref|YP_003461131.1| thymidylate synthase [Thioalkalivibrio sp. K90mix] gi|288944696|gb|ADC72395.1| thymidylate synthase [Thioalkalivibrio sp. K90mix] Length = 272 Score = 334 bits (857), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 155/277 (55%), Positives = 197/277 (71%), Gaps = 18/277 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RH+ G DR DRTG GTRS FGYQMRFDL+ GFPL+TTK+ H +SV+HELL Sbjct: 1 MQQYLDLVRHIRAHGIDRPDRTGTGTRSVFGYQMRFDLAAGFPLVTTKRTHLRSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RG++N+ YL H V IWDEWA + G+LGPIYG QWR+W + DQ++ +V +L+ Sbjct: 61 WFIRGETNIGYLKEHKVRIWDEWATEGGDLGPIYGAQWRNWAGH-----DQLAELVSNLK 115 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 PYSRRHI+SAWNVA + +MAL PCH LFQFYV +G+LSCQLYQRS Sbjct: 116 NRPYSRRHIISAWNVADLPDESISPQENANAGRMALAPCHTLFQFYVADGRLSCQLYQRS 175 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+L T MLA V + G+F+HT GD HLY+NH +Q D L R P L Sbjct: 176 ADVFLGVPFNIASYALFTHMLAQVADLEPGDFVHTFGDAHLYHNHEQQVDELLGREPLPL 235 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + +NP + DL +F ++D +R Y+ H I A V++ Sbjct: 236 PTLHLNPEVTDLFAFTFDDIEVRDYQSHPPIKAPVAI 272 >gi|229821345|ref|YP_002882871.1| thymidylate synthase [Beutenbergia cavernae DSM 12333] gi|229567258|gb|ACQ81109.1| thymidylate synthase [Beutenbergia cavernae DSM 12333] Length = 275 Score = 334 bits (857), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 195/264 (73%), Gaps = 5/264 (1%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL V+ G+ + DRTG GTRS FG Q+R+DL FPL+TTK+VH KS+VHELLWF Sbjct: 15 QYEDLLAEVLADGAHKSDRTGTGTRSVFGRQLRYDLRHSFPLVTTKRVHVKSLVHELLWF 74 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG+SNV YL +GV IW+EWAD DGELGP+YGVQWRSWP DG IDQI+ +V++LR D Sbjct: 75 LRGESNVRYLQENGVRIWNEWADDDGELGPVYGVQWRSWPTPDGGHIDQIARVVENLRTD 134 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRRHIVSAWNVA +D MAL PCH LFQFYV NG+LSCQLYQRS D+FLG+PFN+ASYS Sbjct: 135 PDSRRHIVSAWNVAELDDMALAPCHALFQFYVANGELSCQLYQRSADLFLGVPFNVASYS 194 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN--PNIVDLL 240 LLT M+A G G+F+ T GD H+Y+NH EQ QL+R P P + + P+I D Sbjct: 195 LLTHMVAQQTGLAVGDFVWTGGDCHIYDNHTEQVREQLARDPYPFPTLALRQAPSIFD-- 252 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y D + Y+ HA I A ++V Sbjct: 253 -YAYADVEVVGYQHHAPIAAPIAV 275 >gi|5542439|pdb|1QQQ|A Chain A, Crystal Structure Analysis Of Ser254 Mutant Of Escherichia Coli Thymidylate Synthase Length = 264 Score = 334 bits (857), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 150/262 (57%), Positives = 198/262 (75%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWF Sbjct: 3 QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLWF 62 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 63 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL P H FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRSXDVFLGLPFNIASYA 182 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 183 LLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+ H I A V++ Sbjct: 243 RFEDFEIEGYDSHPGIKAPVAI 264 >gi|120610137|ref|YP_969815.1| thymidylate synthase [Acidovorax citrulli AAC00-1] gi|171769177|sp|A1TM53|TYSY_ACIAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120588601|gb|ABM32041.1| thymidylate synthase [Acidovorax citrulli AAC00-1] Length = 279 Score = 334 bits (856), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 163/269 (60%), Positives = 196/269 (72%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GTRS FGYQMRFDL++GFPL+TTKKVH KS++ ELLWF Sbjct: 11 QYEDFMRHVYTHGVAKGDRTGTGTRSVFGYQMRFDLNEGFPLVTTKKVHLKSIITELLWF 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G S+ +L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS +V++LR Sbjct: 71 LTGSSSNHWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISQVVETLRTH 130 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA +DKMAL PCH FQFYV + GKLSCQLYQRS D+FLG+P Sbjct: 131 PDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPPQAAGERGKLSCQLYQRSADIFLGVP 190 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A + G+FI T GD H+Y+NHFEQ +LQLSR+P P + I Sbjct: 191 FNIASYALLTHMMAQQCNLEVGDFIWTGGDCHIYSNHFEQVELQLSRAPHPYPTLHILRR 250 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +R+EDF +R Y H AI A V+V Sbjct: 251 PDSLFDYRFEDFEVRDYAHHPAIKAPVAV 279 >gi|239827018|ref|YP_002949642.1| thymidylate synthase [Geobacillus sp. WCH70] gi|259550783|sp|C5DAR2|TYSY_GEOSW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|239807311|gb|ACS24376.1| thymidylate synthase [Geobacillus sp. WCH70] Length = 264 Score = 334 bits (856), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL +++ G ++ DRTGVGT S FG Q+RF+L +GFPLLTTKK+H +S+++ELL Sbjct: 1 MRQYLQLLEDILENGVEKDDRTGVGTLSVFGRQLRFNLQEGFPLLTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGPIYG QWRSW DG +DQIS +++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTVDQISWVIEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA +DKM LPPCH FQFYV +GKLSC QRS D FLG+PFNIAS Sbjct: 121 RNPNSRRLLVSAWNVAELDKMKLPPCHYAFQFYVADGKLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A GE I + GDVHLY NH EQA LQL+R PR LP+++I + Sbjct: 181 YALLTHMIAQQCDLDVGELIFSGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+PH I A V+V Sbjct: 241 EYEFEDFEIVDYDPHPHIKAPVAV 264 >gi|50843135|ref|YP_056362.1| thymidylate synthase [Propionibacterium acnes KPA171202] gi|282855010|ref|ZP_06264342.1| thymidylate synthase [Propionibacterium acnes J139] gi|62901287|sp|Q6A761|TYSY_PROAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|50840737|gb|AAT83404.1| thymidylate synthase [Propionibacterium acnes KPA171202] gi|282581598|gb|EFB86983.1| thymidylate synthase [Propionibacterium acnes J139] gi|313763382|gb|EFS34746.1| thymidylate synthase [Propionibacterium acnes HL013PA1] gi|313814694|gb|EFS52408.1| thymidylate synthase [Propionibacterium acnes HL059PA1] gi|313828240|gb|EFS65954.1| thymidylate synthase [Propionibacterium acnes HL063PA2] gi|314914540|gb|EFS78371.1| thymidylate synthase [Propionibacterium acnes HL005PA4] gi|314917608|gb|EFS81439.1| thymidylate synthase [Propionibacterium acnes HL050PA1] gi|314919636|gb|EFS83467.1| thymidylate synthase [Propionibacterium acnes HL050PA3] gi|314930291|gb|EFS94122.1| thymidylate synthase [Propionibacterium acnes HL067PA1] gi|314956850|gb|EFT01004.1| thymidylate synthase [Propionibacterium acnes HL027PA1] gi|314957647|gb|EFT01750.1| thymidylate synthase [Propionibacterium acnes HL002PA1] gi|314967396|gb|EFT11495.1| thymidylate synthase [Propionibacterium acnes HL082PA2] gi|314982115|gb|EFT26208.1| thymidylate synthase [Propionibacterium acnes HL110PA3] gi|315090354|gb|EFT62330.1| thymidylate synthase [Propionibacterium acnes HL110PA4] gi|315093637|gb|EFT65613.1| thymidylate synthase [Propionibacterium acnes HL060PA1] gi|315098007|gb|EFT69983.1| thymidylate synthase [Propionibacterium acnes HL059PA2] gi|315102647|gb|EFT74623.1| thymidylate synthase [Propionibacterium acnes HL046PA1] gi|315104462|gb|EFT76438.1| thymidylate synthase [Propionibacterium acnes HL050PA2] gi|315106205|gb|EFT78181.1| thymidylate synthase [Propionibacterium acnes HL030PA1] gi|315110462|gb|EFT82438.1| thymidylate synthase [Propionibacterium acnes HL030PA2] gi|327325477|gb|EGE67281.1| thymidylate synthase [Propionibacterium acnes HL103PA1] gi|327451226|gb|EGE97880.1| thymidylate synthase [Propionibacterium acnes HL087PA3] gi|327452583|gb|EGE99237.1| thymidylate synthase [Propionibacterium acnes HL083PA2] gi|328754777|gb|EGF68393.1| thymidylate synthase [Propionibacterium acnes HL087PA1] Length = 269 Score = 334 bits (856), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 7/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG IDQI+++V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVEQIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA I +MALPPCH LFQFYV D G LSCQLYQRSGD FLG+ Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I D+ F D TL Y+P+ A+ A ++V Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269 >gi|119961084|ref|YP_948699.1| thymidylate synthase [Arthrobacter aurescens TC1] gi|171704616|sp|A1R8Y7|TYSY_ARTAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119947943|gb|ABM06854.1| thymidylate synthase [Arthrobacter aurescens TC1] Length = 267 Score = 334 bits (856), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 158/261 (60%), Positives = 193/261 (73%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV ELLWFL Sbjct: 7 YEDLLRDVMANGTHKSDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVAVELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV ++ GVSIWDEWAD DGELGP+YGVQWRSWP DG IDQIS ++ +L A+P Sbjct: 67 RGDSNVKWMQDQGVSIWDEWADADGELGPVYGVQWRSWPTPDGGHIDQISELMTNLAANP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHIVSAWNV+ + MALPPCH FQFYV +GKLSCQLYQRS D FLG+PFNIASY+L Sbjct: 127 DSRRHIVSAWNVSELKDMALPPCHAFFQFYVADGKLSCQLYQRSADTFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A +G + GEF+ T GDVH+Y+NH +Q QLSR P PQ+ I + + Sbjct: 187 LTRMVAQQLGLEPGEFVWTGGDVHVYDNHVDQVAEQLSREPYEYPQLKILRKPDSIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +DF + Y H I A ++V Sbjct: 247 LDDFEVVDYRHHPTIKAPIAV 267 >gi|320539709|ref|ZP_08039373.1| thymidylate synthetase [Serratia symbiotica str. Tucson] gi|320030321|gb|EFW12336.1| thymidylate synthetase [Serratia symbiotica str. Tucson] Length = 264 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 150/264 (56%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMNKVLAEGTSKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ+S+++Q L+ Sbjct: 61 WFLNGDTNVAYLRENNVTIWDEWADENGDLGPVYGKQWRAWGATDGRQIDQLSNVLQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV + +MAL PCH QFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QEPDSRRIIVSAWNVGELGQMALAPCHAFVQFYVAGGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCYLEVGDFVWTGGDTHLYSNHMEQTQLQLTREPRPLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +ED + Y+PH AI A V++ Sbjct: 241 DYCFEDLAIEGYDPHPAIKAPVAI 264 >gi|212639286|ref|YP_002315806.1| thymidylate synthase [Anoxybacillus flavithermus WK1] gi|226713165|sp|B7GI39|TYSY_ANOFW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|212560766|gb|ACJ33821.1| Thymidylate synthase [Anoxybacillus flavithermus WK1] Length = 264 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 192/264 (72%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL +++ G + DRTG GT S FG Q+RFDL +GFPLLTTKK+H +S++HELL Sbjct: 1 MKQYLQLLEDILQNGVYKDDRTGTGTLSVFGRQLRFDLREGFPLLTTKKLHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV+IWDEWAD+ G+LGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 61 WFLSGDTNIRYLKENGVTIWDEWADEKGDLGPVYGAQWRSWRGADGRTIDQISEVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA +D M LPPCH FQFYV+NG LSC QRS D FLG+PFNIAS Sbjct: 121 TNPNSRRLLVSAWNVAELDHMKLPPCHYAFQFYVENGTLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A Q E I T GDVHLY NH EQA LQL+R PR LP++II + Sbjct: 181 YALLTYMVAQQCDLQPKELIFTGGDVHLYMNHIEQAKLQLTREPRPLPKLIIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A VSV Sbjct: 241 EYRFEDFEIVDYDPHPHIKADVSV 264 >gi|238898972|ref|YP_002924654.1| thymidylate synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259550788|sp|C4K7G3|TYSY_HAMD5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|229466732|gb|ACQ68506.1| thymidylate synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 264 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++ V+ G+++ DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLHLMKKVLNEGTEKEDRTGTGTVSIFGHQMRFNLKEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + VSIW+EWADK G LGPIYG QWR+W DG+ +DQ+S ++ L+ Sbjct: 61 WFLKGDTNIAYLRENQVSIWEEWADKTGSLGPIYGKQWRAWGTPDGHQVDQLSQTLELLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPDSRRMIVSAWNVGELDKMALAPCHAFFQFYVVKKTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLL M+A F G+F+ T GD+HLY+NH +QA LQL+R PR+LP ++IN L Sbjct: 181 YSLLMHMIAQQCDFFLGDFVWTGGDIHLYSNHLDQAHLQLTREPRSLPHLLINRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF+L Y P+ AI A V++ Sbjct: 241 DYHFEDFSLEKYNPYPAIKAPVAI 264 >gi|187736511|ref|YP_001878623.1| Thymidylate synthase [Akkermansia muciniphila ATCC BAA-835] gi|187426563|gb|ACD05842.1| Thymidylate synthase [Akkermansia muciniphila ATCC BAA-835] Length = 271 Score = 333 bits (854), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 158/271 (58%), Positives = 197/271 (72%), Gaps = 7/271 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL V+ G+ R DRTG GT FG Q R+DL GFP LTTKK+H +S+++ELL Sbjct: 1 MKQYLALLEDVLSNGAGREDRTGTGTIGVFGRQSRYDLRDGFPCLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ +L +GVSIWDEWAD++G+LGP+YG QWR WP DG IDQI+ +V L+ Sbjct: 61 WFLKGETNIKFLKDNGVSIWDEWADENGDLGPVYGAQWRCWPGNDGKPIDQIARLVDGLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-------LSCQLYQRSGDVFLG 173 +P+SRRHIVSAWNVAL+D MALPPCH LFQF V + LS QLYQRS D+FLG Sbjct: 121 HNPWSRRHIVSAWNVALVDDMALPPCHSLFQFCVIPAQPGEKKHGLSLQLYQRSADLFLG 180 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 +PFNIASY+LL +M A V G++ EFIHT GD+HLY NH +QA QLSR+PR LP M +N Sbjct: 181 VPFNIASYALLLLMTAQVCGYEAREFIHTFGDLHLYRNHLDQAREQLSRTPRPLPVMKLN 240 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + + F YEDF L Y+P I A +SV Sbjct: 241 PEVKTIDGFHYEDFELVGYDPLPHIKAPISV 271 >gi|172041200|ref|YP_001800914.1| thymidylate synthase [Corynebacterium urealyticum DSM 7109] gi|171852504|emb|CAQ05480.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 273 Score = 333 bits (854), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL ++ G+ + DRTG GT S FG Q+RF+L++ FPL+TTK VH KSVV ELLWFL Sbjct: 14 YEDLLSKILAEGAKKDDRTGTGTTSLFGQQIRFNLAESFPLITTKSVHVKSVVGELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 GDSNV +L +G+ IW+EWAD+DG+LGP+YGVQWRSWP DG IDQIS ++ L+ +P Sbjct: 74 SGDSNVRWLQDNGIRIWNEWADEDGDLGPVYGVQWRSWPTPDGRHIDQISQALEMLKQNP 133 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 134 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 193 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEFI T GD H+Y+NH EQ +LQLSR PR PQ+ + D+ S+ Sbjct: 194 LTHMFAQQTGLEVGEFIWTGGDCHIYDNHREQVELQLSREPRPYPQLELT-KAKDMFSYG 252 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED Y+PH I AKV+V Sbjct: 253 FEDVNFVGYDPHPVIKAKVAV 273 >gi|119713736|gb|ABL97785.1| thymidylate synthase [uncultured marine bacterium HF10_29C11] Length = 257 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 148/257 (57%), Positives = 196/257 (76%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 +RH++ G ++ DRTG GT S FGYQMRFDLS+GFP++TTKK+H +S+VHELLWFL+GD+ Sbjct: 1 MRHILDNGVEKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLRSIVHELLWFLKGDT 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 NV YL +GV IW+EWAD++G+LGP+YG QWR+W DG +IDQ+ ++ ++ +P SRR Sbjct: 61 NVKYLQENGVRIWNEWADENGDLGPVYGKQWRNWEAKDGRIIDQVERAIEQIKNNPNSRR 120 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 IVSAWNV +D+MAL PCH FQF+V +GKL+CQLYQRS DVFLG+PFNIASY+LLT M Sbjct: 121 IIVSAWNVGELDEMALMPCHAFFQFHVADGKLNCQLYQRSADVFLGVPFNIASYALLTHM 180 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A V G + G F+HTLGD HLY NH +QA Q+SR P LP + ++ +I D+ +F +E Sbjct: 181 MAQVCGLEAGTFVHTLGDAHLYMNHLDQAREQISREPLPLPVLKLDQSIADIDAFTFEHI 240 Query: 248 TLRSYEPHAAILAKVSV 264 + YE H I A +SV Sbjct: 241 EIIGYEHHPHISAPISV 257 >gi|308178169|ref|YP_003917575.1| thymidylate synthase [Arthrobacter arilaitensis Re117] gi|307745632|emb|CBT76604.1| thymidylate synthase [Arthrobacter arilaitensis Re117] Length = 267 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 159/261 (60%), Positives = 189/261 (72%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y LLR V++ G+ + DRTG GT S FG Q+RFDL FPL+TTK+VH+KSV ELLWFL Sbjct: 7 YETLLRDVLENGTAKEDRTGTGTLSVFGRQIRFDLQDSFPLITTKRVHFKSVAAELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L GV IW+EWAD+DGELGP+YGVQWRSWP +G IDQIS +V SLR +P Sbjct: 67 RGESNVKWLQDQGVRIWNEWADEDGELGPVYGVQWRSWPTPEGGYIDQISQLVDSLRNNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHIVSAWNVA I MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRHIVSAWNVAEIQNMALPPCHVFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA + + GEFI T GDVH+Y NH EQ QLSR P P + N + + Sbjct: 187 LTAMLAHQLDLEPGEFIWTGGDVHIYTNHVEQVKEQLSRDPYPYPTLSFNSKPDSIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 EDF++ Y+ H I V+V Sbjct: 247 LEDFSINDYQHHPTIKGTVAV 267 >gi|314924266|gb|EFS88097.1| thymidylate synthase [Propionibacterium acnes HL001PA1] Length = 269 Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 161/270 (59%), Positives = 200/270 (74%), Gaps = 7/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG IDQI+++V +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVDQIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA I +MALPPCH LFQFYV D G LSCQLYQRSGD FLG+ Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I D+ F D TL Y+P+ A+ A ++V Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269 >gi|56420311|ref|YP_147629.1| thymidylate synthase [Geobacillus kaustophilus HTA426] gi|261419980|ref|YP_003253662.1| thymidylate synthase [Geobacillus sp. Y412MC61] gi|297530062|ref|YP_003671337.1| thymidylate synthase [Geobacillus sp. C56-T3] gi|319766795|ref|YP_004132296.1| thymidylate synthase [Geobacillus sp. Y412MC52] gi|62901180|sp|Q5KZ25|TYSY_GEOKA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|56380153|dbj|BAD76061.1| thymidylate synthetase [Geobacillus kaustophilus HTA426] gi|261376437|gb|ACX79180.1| thymidylate synthase [Geobacillus sp. Y412MC61] gi|297253314|gb|ADI26760.1| thymidylate synthase [Geobacillus sp. C56-T3] gi|317111661|gb|ADU94153.1| thymidylate synthase [Geobacillus sp. Y412MC52] Length = 264 Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL +++ G ++ DRTGVGT S FG Q+RF+L GFPL+TTKK+H +S+++ELL Sbjct: 1 MRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGPIYG QWRSW DG IDQI+ +V+ ++ Sbjct: 61 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTIDQIAWVVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA +D+M LPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 121 RNPNSRRLLVSAWNVAELDEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A GE I T GDVHLY NH EQA LQL+R PR LP+++I + Sbjct: 181 YALLTHMIAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPPSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF + Y PH I A V+V Sbjct: 241 DYEYDDFEIVGYNPHPTIKAPVAV 264 >gi|256394947|ref|YP_003116511.1| thymidylate synthase [Catenulispora acidiphila DSM 44928] gi|256361173|gb|ACU74670.1| thymidylate synthase [Catenulispora acidiphila DSM 44928] Length = 277 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 155/262 (59%), Positives = 195/262 (74%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL+ V+ G+ + DRTGVGTRS FG+Q+R+ L GFPL+TTKKVH+KSV +ELLWF Sbjct: 17 QYEDLLQRVLTSGTVKADRTGVGTRSLFGHQLRYRLQDGFPLITTKKVHFKSVAYELLWF 76 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG+ NV +L HGVSIWDEWAD +G+LGP+YGVQWRSWP DG +DQI+ +++ LR D Sbjct: 77 LRGEGNVRWLQEHGVSIWDEWADAEGDLGPVYGVQWRSWPTPDGRHVDQIAEVLRLLRTD 136 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNV + MALPPCH FQFYV +G LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 137 PDSRRIVVSAWNVGELTNMALPPCHAFFQFYVADGALSCQLYQRSADMFLGVPFNIASYA 196 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A+ G G+ + T GD+H+Y+NH EQA L L+R R P + + P L + Sbjct: 197 LLTHMIAAQTGLAVGDLVWTGGDIHIYDNHVEQARLLLTREARLFPTLELKPAD-SLFDY 255 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YED + Y+PH AI A V+V Sbjct: 256 SYEDIAVLGYDPHPAIKAPVAV 277 >gi|332765782|gb|EGJ95995.1| thymidylate synthase [Shigella flexneri 2930-71] Length = 257 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 147/257 (57%), Positives = 195/257 (75%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 ++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWFL+GD+ Sbjct: 1 MQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDT 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ DP SRR Sbjct: 61 NIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRR 120 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LL M Sbjct: 121 IIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHM 180 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + +R+EDF Sbjct: 181 MAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDF 240 Query: 248 TLRSYEPHAAILAKVSV 264 + Y+PH + A V++ Sbjct: 241 EIEGYDPHPGVKAPVAI 257 >gi|116671564|ref|YP_832497.1| thymidylate synthase [Arthrobacter sp. FB24] gi|171855203|sp|A0JZC7|TYSY_ARTS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116611673|gb|ABK04397.1| thymidylate synthase [Arthrobacter sp. FB24] Length = 267 Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 155/261 (59%), Positives = 194/261 (74%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GT S FG QMRFDLS+ FPL+TTK+VH+KSV ELLWFL Sbjct: 7 YEDLLRDVLANGTHKSDRTGTGTLSVFGRQMRFDLSQSFPLITTKRVHFKSVAVELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV ++ GV+IW+EWAD DGELGP+YGVQWRSWP DG IDQI+ +V++L+++P Sbjct: 67 RGETNVKWMQDQGVTIWNEWADADGELGPVYGVQWRSWPTPDGGHIDQIAELVENLKSNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHIVSAWNVA + MALPPCH FQFYV +GKLSCQLYQRS D FLG+PFNIASY+L Sbjct: 127 DSRRHIVSAWNVAELQDMALPPCHAFFQFYVADGKLSCQLYQRSADTFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA +G + GEF+ T GDVH+Y+NH +Q QL R P PQ+ I + + Sbjct: 187 LTCMLAQQVGLEPGEFVWTGGDVHIYDNHMDQVLKQLKREPYEYPQLKILRKPDSIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +DF + Y+ H I A ++V Sbjct: 247 LDDFEVVGYQHHPTIKAPIAV 267 >gi|269795625|ref|YP_003315080.1| thymidylate synthase [Sanguibacter keddieii DSM 10542] gi|269097810|gb|ACZ22246.1| thymidylate synthase [Sanguibacter keddieii DSM 10542] Length = 271 Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 154/262 (58%), Positives = 197/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLRHV+ G+ + DRTG GTRS FG+QMRFDLS+GFPL+TTK+VH +SVV ELLWF Sbjct: 11 QYEDLLRHVMAHGTRKSDRTGTGTRSVFGHQMRFDLSEGFPLVTTKRVHLRSVVGELLWF 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L +GV IW+EWAD DGELGP+YGVQWRSWP DG +DQ++ ++++LR + Sbjct: 71 LRGDSNVGWLQENGVRIWNEWADDDGELGPVYGVQWRSWPTPDGQHVDQVAQVLETLRTN 130 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA +D MAL PCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 131 PDSRRMIVSAWNVADLDAMALMPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYA 190 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A +G + G+F+ T GD H+Y+NH +Q L R P P++ + L + Sbjct: 191 LLTHMVAQQVGLEVGDFVWTGGDCHVYDNHVDQVAELLGREPYPFPRLELR-QAASLFDY 249 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 ++D T+ Y+ H I A V+V Sbjct: 250 TFDDVTVEGYQHHPTIPAPVAV 271 >gi|242240430|ref|YP_002988611.1| thymidylate synthase [Dickeya dadantii Ech703] gi|242132487|gb|ACS86789.1| thymidylate synthase [Dickeya dadantii Ech703] Length = 264 Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 149/264 (56%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G LGP+YG QWR+W DG IDQ+ +++ L+ Sbjct: 61 WFLNGDTNIGYLRDNKVSIWDEWADENGNLGPVYGKQWRAWGAADGRQIDQLQTVLHQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQL R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHLEQTRLQLGREPRPLPKLVIKRRPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH AI A V++ Sbjct: 241 DYQFDDFDIDGYDPHPAIKAPVAI 264 >gi|300858051|ref|YP_003783034.1| thymidylate synthase [Corynebacterium pseudotuberculosis FRC41] gi|300685505|gb|ADK28427.1| Thymidylate synthase [Corynebacterium pseudotuberculosis FRC41] gi|302205773|gb|ADL10115.1| thymidylate synthase [Corynebacterium pseudotuberculosis C231] gi|302330331|gb|ADL20525.1| thymidylate synthase [Corynebacterium pseudotuberculosis 1002] gi|308276007|gb|ADO25906.1| thymidylate synthase [Corynebacterium pseudotuberculosis I19] Length = 265 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 158/261 (60%), Positives = 194/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ GS + DRTG GT S F QMRFDLS+ FPL+TTKKV+W+ VV ELLWFL Sbjct: 6 YEDLLRKILSEGSHKDDRTGTGTTSLFAQQMRFDLSESFPLITTKKVYWRGVVGELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G SN+++L + + IWDEWA +DGELGPIYGVQWRSWP G +DQIS + L+ +P Sbjct: 66 QGSSNITWLQDNNIHIWDEWASEDGELGPIYGVQWRSWPTPHGAHVDQISGALDMLKNNP 125 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNVA +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYS Sbjct: 126 DSRRNIVSAWNVAELDNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSA 185 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEFI T GD H+Y+NH EQ ++QLSR PR PQ+ + DL S+ Sbjct: 186 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHREQVEIQLSREPRPYPQLEL-AKAKDLFSYD 244 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + DF + Y+PH AI A+V+V Sbjct: 245 FADFQVIGYDPHPAIRAEVAV 265 >gi|313159542|gb|EFR58905.1| thymidylate synthase [Alistipes sp. HGB5] Length = 299 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 168/298 (56%), Positives = 197/298 (66%), Gaps = 35/298 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR + G R DRTG GT+ FG+QMRFDL++GFPLLTTKKV K V+HELL Sbjct: 1 MKQYLDLLRRIKTEGVVRGDRTGTGTKGVFGHQMRFDLAEGFPLLTTKKVFLKGVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------DKD----------------- 87 WFL GD+N+ YL +GV IWD A D+D Sbjct: 61 WFLAGDTNIKYLVDNGVHIWDNDAFRYYNELCVRHGVLPVDRDTFLRAAQEGVESPVEGY 120 Query: 88 --GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 G+L +YG QWRSWP DG V+DQI+ V +R++P SRR +VSAWNVA ++ MALPP Sbjct: 121 KFGDLNHVYGYQWRSWPKPDGTVVDQIAQAVGLIRSNPESRRILVSAWNVAEVEDMALPP 180 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 CH LFQFYV GKLSCQLYQRS D FLG+PFNIASY+LLT+M A V G Q GEF+HTLGD Sbjct: 181 CHVLFQFYVAEGKLSCQLYQRSADTFLGVPFNIASYALLTLMTAQVCGLQPGEFVHTLGD 240 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 HLY NH EQ D QL+R PR LP M +NP + L FRY DFTL Y+P AI A +S Sbjct: 241 THLYLNHLEQVDEQLAREPRPLPVMRLNPAVKSLFDFRYGDFTLEGYDPWPAIKAPMS 298 >gi|88855422|ref|ZP_01130086.1| thymidylate synthase [marine actinobacterium PHSC20C1] gi|88815329|gb|EAR25187.1| thymidylate synthase [marine actinobacterium PHSC20C1] Length = 280 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 153/261 (58%), Positives = 195/261 (74%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR + G + DRTG GTRS FG Q+RF+L++GFPL+TTK+VH+KS+ +ELLWFL Sbjct: 20 YEDLLRDTLANGVHKSDRTGTGTRSVFGRQLRFNLAEGFPLITTKRVHFKSIAYELLWFL 79 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNVS+L +GV+IW+EWAD+DGELGP+YGVQWRSWP G IDQIS ++ ++ +P Sbjct: 80 RGESNVSWLRDNGVTIWNEWADEDGELGPVYGVQWRSWPTPSGEQIDQISEVIDQIKTNP 139 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWN A I +MAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 140 DSRRLIVSAWNPADIPQMALAPCHAFFQFYVANGKLSCQLYQRSADLFLGVPFNIASYAL 199 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G + G+F+ T GD H+Y+NH EQ QL+R P P++ I+ + + Sbjct: 200 LTHMVAEQTGLEVGDFVWTGGDCHIYDNHIEQVTEQLTREPFGPPRLAISSTPDSVFGYA 259 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +EDF + YE H AI A V+V Sbjct: 260 FEDFEIVDYEHHPAIKAPVAV 280 >gi|328751979|gb|EGF65595.1| thymidylate synthase [Propionibacterium acnes HL025PA2] Length = 269 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 160/270 (59%), Positives = 201/270 (74%), Gaps = 7/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L+ + + IWDEWAD++G+LGP+YG QWRSWPD DG IDQI+++V+ +R Sbjct: 61 WFLRGDTNVGWLYDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVEQIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA I +MALPPCH LFQFYV D G LSCQLYQRSGD FLG+ Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I D+ F D TL Y+P+ A+ A ++V Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269 >gi|296394396|ref|YP_003659280.1| thymidylate synthase [Segniliparus rotundus DSM 44985] gi|296181543|gb|ADG98449.1| thymidylate synthase [Segniliparus rotundus DSM 44985] Length = 270 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 156/261 (59%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G++R DRTG GT S FG+Q+R+DL+KGFPL+TTKKVH KS+VHELLWFL Sbjct: 11 YEDLLRLVLERGAERPDRTGTGTLSLFGHQLRYDLAKGFPLVTTKKVHLKSIVHELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+NV +L GV+IWDEWA +DG LGP+YG QWRSWP DG V+DQI V+ LR+DP Sbjct: 71 RGDTNVRWLQERGVTIWDEWAREDGSLGPVYGAQWRSWPTPDGEVVDQIDQAVRLLRSDP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 +SRR +VSAWNV + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 131 HSRRIVVSAWNVGELSKMALAPCHILFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G G+F+ T GD HLY NH +QA Q++R+P P++ + + + Sbjct: 191 LTHMMAQQAGLHVGDFVWTGGDCHLYRNHLDQAREQIARTPYPYPRLELRQR-PSVFEYE 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + Y H AI A V+V Sbjct: 250 YEDIQIVDYRSHPAIKAPVAV 270 >gi|19552071|ref|NP_600073.1| thymidylate synthase [Corynebacterium glutamicum ATCC 13032] gi|62389734|ref|YP_225136.1| thymidylate synthase [Corynebacterium glutamicum ATCC 13032] gi|145295015|ref|YP_001137836.1| thymidylate synthase [Corynebacterium glutamicum R] gi|25091465|sp|Q8NS38|TYSY_CORGL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172044395|sp|A4QCI7|TYSY_CORGB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|21323610|dbj|BAB98237.1| Thymidylate synthase [Corynebacterium glutamicum ATCC 13032] gi|41325069|emb|CAF19550.1| PROBABLE THYMIDYLATE SYNTHASE [Corynebacterium glutamicum ATCC 13032] gi|140844935|dbj|BAF53934.1| hypothetical protein [Corynebacterium glutamicum R] Length = 266 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR + + GS + DRTG GT S FG Q+RFDL++GFPLLTTKKVH+ SVV ELLWFL Sbjct: 7 YEDLLRKIAEEGSHKDDRTGTGTTSLFGQQIRFDLNEGFPLLTTKKVHFHSVVGELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +GDSNV +L + + IW+EWAD+DGELGP+YGVQWRSWP DG IDQIS +++LR +P Sbjct: 67 QGDSNVKWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISGALETLRNNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEFI T GD H+Y+NH EQ QLSR R P + +N + + Sbjct: 187 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHKEQVAEQLSREARPYPTLELN-KAASMFEYS 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D T+ Y+PH I KV+V Sbjct: 246 FDDITVSGYDPHPLIRGKVAV 266 >gi|297528628|ref|YP_003669903.1| thymidylate synthase [Geobacillus sp. C56-T3] gi|297251880|gb|ADI25326.1| thymidylate synthase [Geobacillus sp. C56-T3] Length = 264 Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 153/264 (57%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR ++K G ++ DRTG GT S FG Q+RFDL KGFPLLTTKK+H +S+++ELL Sbjct: 1 MKQYLDLLRDILKNGIEKEDRTGTGTISVFGRQLRFDLQKGFPLLTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L+ +GV+IWDEWAD++GELG IYG QWR+W DG IDQI+ +++ ++ Sbjct: 61 WFLRGDTNVRFLNENGVTIWDEWADENGELGRIYGAQWRAWRTADGGTIDQITRVIEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WN+ +D+MALPPCH FQFYV G+LSC QRS D FLG+PFNIAS Sbjct: 121 HNPNSRRLLVSSWNIGELDQMALPPCHYAFQFYVAAGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GE I + GDVHLY NH EQA LQL+R P LP++II + Sbjct: 181 YALLTHMVAQQCDLEVGELIFSGGDVHLYKNHVEQAKLQLTRDPCPLPKLIIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF Y+PH AI A +SV Sbjct: 241 GYCYEDFEFVGYDPHPAIKAPISV 264 >gi|269957617|ref|YP_003327406.1| thymidylate synthase [Xylanimonas cellulosilytica DSM 15894] gi|269306298|gb|ACZ31848.1| thymidylate synthase [Xylanimonas cellulosilytica DSM 15894] Length = 272 Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 159/261 (60%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LLR V+ G+ + DRTG GT S FG Q+R+DLS+GFPL+TTK+VH KSVV+ELLWFL Sbjct: 13 YENLLRDVLAHGTHKDDRTGTGTTSVFGRQLRYDLSQGFPLITTKRVHLKSVVYELLWFL 72 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L HGVSIWDEWA GELGP+YGVQWRSWP DG +DQIS +V LR +P Sbjct: 73 RGESNVRWLQEHGVSIWDEWASPAGELGPVYGVQWRSWPTPDGAHVDQISQVVDQLRTNP 132 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHIVSAWNVA I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 133 DSRRHIVSAWNVAEIKNMALPPCHLLFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 192 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH Q QLSR P ++ + P + + Sbjct: 193 LTHMVAAQTGLDVGEFVWTGGDCHIYDNHLAQVTEQLSRDPYPYARLELAPRD-SIFDYT 251 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y+D + Y+ H AI A V+V Sbjct: 252 YDDVVVHDYQHHPAIKAAVAV 272 >gi|300113048|ref|YP_003759623.1| thymidylate synthase [Nitrosococcus watsonii C-113] gi|299538985|gb|ADJ27302.1| thymidylate synthase [Nitrosococcus watsonii C-113] Length = 264 Score = 331 bits (849), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 156/264 (59%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ G ++ DRTG GT S FG+QMRFDL +GFPL+TT+K+H +S+ ELL Sbjct: 1 MKPYLDLIQKILATGVEQDDRTGTGTWSIFGHQMRFDLRQGFPLVTTRKLHVRSIFIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP DG +DQ++ + +R Sbjct: 61 WFLRGETNVKYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGGYLDQMAKVSTQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P+SRRHIV A+N A +D+MALPPCH LFQFYV G+LSCQLYQRS DVFLG PFNIAS Sbjct: 121 HYPHSRRHIVVAYNPACVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGTPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT ++A G GEFI T GDVHLY NH E A LQL+R P LP++ I L Sbjct: 181 YALLTHLMAQQCGLGVGEFIWTGGDVHLYRNHLEAARLQLTREPLPLPRLQIKRRPSSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++Y+D + Y+ + AI A VSV Sbjct: 241 EYQYDDLEIVDYQSYPAIKAAVSV 264 >gi|209363794|ref|YP_001423860.2| thymidylate synthase [Coxiella burnetii Dugway 5J108-111] gi|207081727|gb|ABS77420.2| thymidylate synthase [Coxiella burnetii Dugway 5J108-111] Length = 296 Score = 331 bits (848), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 149/264 (56%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+ ++ G + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL Sbjct: 33 MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 92 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W DG +DQ+ +++ ++ Sbjct: 93 WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 152 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS Sbjct: 153 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 212 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A + GEFI + GD H+YN H +Q QLSR PR LPQ+IIN + L Sbjct: 213 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 272 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + + DF++ +Y PH AI A V+V Sbjct: 273 DYNFNDFSIVNYHPHPAIKAPVAV 296 >gi|325676379|ref|ZP_08156058.1| thymidylate synthase [Rhodococcus equi ATCC 33707] gi|325552940|gb|EGD22623.1| thymidylate synthase [Rhodococcus equi ATCC 33707] Length = 264 Score = 331 bits (848), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 159/265 (60%), Positives = 197/265 (74%), Gaps = 2/265 (0%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 MH Y DLLR V+ G+ + DRTG GTRS FG+QMR+DL++GFPL+TTKKVH KS+V+EL Sbjct: 1 MHSPYEDLLRLVMDTGTAKADRTGTGTRSVFGHQMRWDLAEGFPLITTKKVHLKSIVYEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 LWFLRG+SNV +L HGV+IWDEWAD DGELGP+YGVQWRSWP G IDQI+ +V++L Sbjct: 61 LWFLRGESNVKWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITKVVETL 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR IVSAWNVA +D MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 121 KTNPDSRRIIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LLT M+A + G+FI T GD H+Y+NH +Q QLSR P P + +N + Sbjct: 181 SYALLTHMVAQQADLEVGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLNKRD-SI 239 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + +ED + Y H AI A V+V Sbjct: 240 FDYTFEDVEIVDYRHHPAIKAPVAV 264 >gi|262380134|ref|ZP_06073289.1| thymidylate synthase [Acinetobacter radioresistens SH164] gi|262298328|gb|EEY86242.1| thymidylate synthase [Acinetobacter radioresistens SH164] Length = 280 Score = 330 bits (847), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 201/280 (71%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+H+++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRQYLDLLQHILEHGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + GELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPAGELGPVYGHQWRNFGATQNEDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 N +DQIS ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V NGKLSCQLY Sbjct: 121 QKNGVDQISWLINEIKTNPNSRRLIVSGWNPKEASQVALPPCHTLFQFFVQNGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V Q G+F+ T GD HLY NHF+QA LQL R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLQVGDFVWTGGDTHLYANHFDQARLQLGRDP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + + F++ED + +Y H+AI A V+V Sbjct: 241 LELCQLKLNPEVKSIFDFKFEDIEIINYHSHSAIKAPVAV 280 >gi|296274222|ref|YP_003656853.1| thymidylate synthase [Arcobacter nitrofigilis DSM 7299] gi|296098396|gb|ADG94346.1| thymidylate synthase [Arcobacter nitrofigilis DSM 7299] Length = 287 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 153/287 (53%), Positives = 202/287 (70%), Gaps = 23/287 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFPL+TTKK H K+++ ELL Sbjct: 1 MKQYLDLMKHVLENGTLKEDRTGTGTKSVFGYQMRFDLSEGFPLVTTKKCHLKAIISELL 60 Query: 61 WFLRGDSN---VSYLH--------------------RHGVSIWDEWADKDGELGPIYGVQ 97 WFL G ++ ++ +H GV++ E +D ELGP+YG Q Sbjct: 61 WFLEGSTDERRLAEIHYGDKAENIIGKKTVWTANADNQGVALGYENSDTVKELGPVYGSQ 120 Query: 98 WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 WRSW DG IDQ+S +++ ++ +P SRR I+SAWNVA I+KMALPPCH FQFYV NG Sbjct: 121 WRSWKTNDGKAIDQVSELIEQIKNNPDSRRLILSAWNVAEIEKMALPPCHTFFQFYVANG 180 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 KLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V + G+F+HT GD HLY+NH EQA+ Sbjct: 181 KLSCQLYQRSADIFLGVPFNIASYALLTMMVAQVCDLEVGDFVHTFGDAHLYSNHLEQAN 240 Query: 218 LQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LQ++R P P M INP+I ++ F+ EDF L +Y+ H I ++V Sbjct: 241 LQITREPFPKPTMKINPDIKNIFDFKMEDFELSNYQAHEHIKGVMAV 287 >gi|124267240|ref|YP_001021244.1| thymidylate synthase [Methylibium petroleiphilum PM1] gi|171769837|sp|A2SHH0|TYSY_METPP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|124260015|gb|ABM95009.1| thymidylate synthase [Methylibium petroleiphilum PM1] Length = 283 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 159/269 (59%), Positives = 193/269 (71%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D LRHV G + DRTG GT S FG+QMRFDL +GFPL+TTKKVH KS+V ELLWF Sbjct: 15 QYEDFLRHVRDHGVVKADRTGTGTTSVFGHQMRFDLREGFPLVTTKKVHLKSIVLELLWF 74 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD N ++L GV+IWDEWA DG+LGP+YGVQWRSWP DG +DQI+ +V+ L+ + Sbjct: 75 LRGDGNATWLQERGVTIWDEWAAPDGDLGPVYGVQWRSWPTPDGGHVDQIAEVVKQLKTN 134 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + KMAL PCH FQFYV G+LSCQLYQRS D+FLG+P Sbjct: 135 PDSRRIIVSAWNVADLPKMALMPCHAFFQFYVAPGDSPSARGRLSCQLYQRSADIFLGVP 194 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT MLA + G+F+ T GD H+Y+NH EQ +LQLSR+PR P + I Sbjct: 195 FNIASYALLTHMLAQQCDLEVGDFVWTGGDCHIYSNHREQVELQLSRAPRPYPTLQIKRR 254 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + Y+PH AI A V+V Sbjct: 255 PPSIFDYAYEDFEIIGYDPHPAIKAPVAV 283 >gi|169630173|ref|YP_001703822.1| thymidylate synthase (ThyA) [Mycobacterium abscessus ATCC 19977] gi|169242140|emb|CAM63168.1| Thymidylate synthase (ThyA) [Mycobacterium abscessus] Length = 266 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 156/261 (59%), Positives = 196/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG+Q+R+ L GFPL+TTKKVH KSV++ELLWFL Sbjct: 7 YEDLLRLVLEEGTPKADRTGTGTRSVFGHQLRYRLEDGFPLITTKKVHLKSVIYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L GV+IWDEWA + GELGP+YGVQWR+WP G IDQIS+ + LR +P Sbjct: 67 RGESNVRWLQERGVTIWDEWASEAGELGPVYGVQWRAWPTPSGEHIDQISAALDLLRTNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G G+F+ T GD H+Y+NH EQ QLSR P P +++ + +R Sbjct: 187 LTHMMAAQAGLGVGDFVWTGGDCHIYDNHVEQVTEQLSRDPYPYPTLVLAQRD-SIFDYR 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED T+ +Y+ HAAI A V+V Sbjct: 246 YEDITVENYQHHAAIKAPVAV 266 >gi|21672690|ref|NP_660757.1| thymidylate synthase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091456|sp|Q8K9C3|TYSY_BUCAP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|21623330|gb|AAM67968.1| thymidylate synthase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 264 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 151/264 (57%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ +IK G+ ++DRTG GT S FG+ M+FDL KGFPL+TTKK H S++HELL Sbjct: 1 MKQYLDLIKKIIKNGNSKKDRTGTGTLSIFGHHMKFDLKKGFPLITTKKCHIPSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ YL+ + +SIWD WADK G+LGPIYG QWRSW +G IDQI ++++ ++ Sbjct: 61 WFLRGETNIKYLNENKISIWDNWADKFGDLGPIYGKQWRSWDTSNGKKIDQIKNVLKQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR +VS+WNV IDKM+L PCH LFQFYV KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 EDPDSRRILVSSWNVGEIDKMSLAPCHILFQFYVLKKKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y++L M+A Q GEF+ T GDVHLY NH E A Q+ R P+ LP++II L Sbjct: 181 YAILIHMIAQQCNLQVGEFLWTGGDVHLYKNHVELAKKQILRIPKKLPELIILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+P++ I K+SV Sbjct: 241 QYSFEDFKIVGYKPYSLIKGKISV 264 >gi|226951963|ref|ZP_03822427.1| thymidylate synthase [Acinetobacter sp. ATCC 27244] gi|226837301|gb|EEH69684.1| thymidylate synthase [Acinetobacter sp. ATCC 27244] Length = 300 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 161/280 (57%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 21 MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 80 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + GELGP+YG QWR++ Y Sbjct: 81 WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFDRPEGELGPVYGHQWRNFGATQNEDGSY 140 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 N DQI ++ ++ +P SRR IVS WN K+ALPPCH LFQF+V + KLSCQLY Sbjct: 141 QQNGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVQDNKLSCQLY 200 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQLSR P Sbjct: 201 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSRDP 260 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I D+ F++ED + YE H AI A V+V Sbjct: 261 LPLCQLKLNPEITDIFDFKFEDIEIVGYESHPAIKAPVAV 300 >gi|325964203|ref|YP_004242109.1| thymidylate synthase [Arthrobacter phenanthrenivorans Sphe3] gi|323470290|gb|ADX73975.1| thymidylate synthase [Arthrobacter phenanthrenivorans Sphe3] Length = 267 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 153/261 (58%), Positives = 192/261 (73%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GT S FG QMRFDLSK FPL+TTK+VH+KSV ELLWFL Sbjct: 7 YEDLLRDVLASGTHKSDRTGTGTTSVFGRQMRFDLSKSFPLITTKRVHFKSVAVELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV ++ GV+IW+EWAD DG+LGP+YGVQWRSWP DG IDQI+ ++ SL+++P Sbjct: 67 RGETNVKWMQDQGVTIWNEWADADGDLGPVYGVQWRSWPTPDGGHIDQIAELMDSLKSNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRH+VSAWNV+ + MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRHVVSAWNVSELRDMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A +G + GEF+ T GDVH+Y NH +Q QL R P PQ+ I + + Sbjct: 187 LTCMVAQQVGLEPGEFVWTGGDVHIYENHMDQVLKQLEREPYEYPQLKILRKPASIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 EDF + Y H I A ++V Sbjct: 247 LEDFEVVGYRHHPTIKAPIAV 267 >gi|29654838|ref|NP_820530.1| thymidylate synthase [Coxiella burnetii RSA 493] gi|161831612|ref|YP_001597383.1| thymidylate synthase [Coxiella burnetii RSA 331] gi|165919218|ref|ZP_02219304.1| thymidylate synthase [Coxiella burnetii RSA 334] gi|62901362|sp|Q83BG2|TYSY_COXBU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036931|sp|A9KF61|TYSY_COXBN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036932|sp|A9N980|TYSY_COXBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|29542106|gb|AAO91044.1| thymidylate synthase [Coxiella burnetii RSA 493] gi|161763479|gb|ABX79121.1| thymidylate synthase [Coxiella burnetii RSA 331] gi|165917079|gb|EDR35683.1| thymidylate synthase [Coxiella burnetii RSA 334] Length = 264 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 149/264 (56%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+ ++ G + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL Sbjct: 1 MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W DG +DQ+ +++ ++ Sbjct: 61 WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A + GEFI + GD H+YN H +Q QLSR PR LPQ+IIN + L Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + + DF++ +Y PH AI A V+V Sbjct: 241 DYNFNDFSIVNYHPHPAIKAPVAV 264 >gi|310642333|ref|YP_003947091.1| thymidylate synthase 2 [Paenibacillus polymyxa SC2] gi|309247283|gb|ADO56850.1| Thymidylate synthase 2 [Paenibacillus polymyxa SC2] Length = 264 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL +++ G + DRTG GT S FG Q+RFDL+KGFPL+TTK+VH KSV+HELL Sbjct: 1 MRNYLELLEDILENGVKKEDRTGTGTLSVFGRQLRFDLAKGFPLVTTKRVHLKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL +GVSIWDEWAD+ G LGP+YG QWR+W DG IDQI++++++++ Sbjct: 61 WFLRGDTNIAYLKENGVSIWDEWADEQGNLGPVYGSQWRAWETPDGQHIDQIANVIEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA I+ M LPPCH +FQFYV GKLSC L RS D FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVAEIESMKLPPCHFVFQFYVAGGKLSCMLTMRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + GEFI + GDVH+Y+NH +Q QL R P LPQ+ I + Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHIQQVHTQLERDPYPLPQLKILRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +YE H I A V++ Sbjct: 241 DYTYEDFVFENYEHHPGIKAPVAI 264 >gi|153208297|ref|ZP_01946676.1| thymidylate synthase [Coxiella burnetii 'MSU Goat Q177'] gi|212219260|ref|YP_002306047.1| thymidylate synthase [Coxiella burnetii CbuK_Q154] gi|120576081|gb|EAX32705.1| thymidylate synthase [Coxiella burnetii 'MSU Goat Q177'] gi|212013522|gb|ACJ20902.1| thymidylate synthase [Coxiella burnetii CbuK_Q154] Length = 264 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 149/264 (56%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+ ++ G + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL Sbjct: 1 MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W DG +DQ+ +++ ++ Sbjct: 61 WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A + GEFI + GD H+YN H +Q QLSR PR LPQ+IIN + L Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINCDPSSLY 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + + DF++ +Y PH AI A V+V Sbjct: 241 DYNFNDFSIVNYHPHPAIKAPVAV 264 >gi|38233422|ref|NP_939189.1| thymidylate synthase [Corynebacterium diphtheriae NCTC 13129] gi|62901324|sp|Q6NIF2|TYSY_CORDI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|38199682|emb|CAE49341.1| thymidylate synthase [Corynebacterium diphtheriae] Length = 270 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 154/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ GS + DRTG GT S FG QMRFDL++ FPL+TTKKV+WK V+ ELLWFL Sbjct: 11 YEDLLRTILEQGSHKDDRTGTGTTSLFGQQMRFDLTEAFPLITTKKVYWKGVIGELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G SNV +L + + IWDEWA ++GELGP+YGVQWRSWP DG +DQI+ + L+ +P Sbjct: 71 QGSSNVRWLQKRNIHIWDEWASEEGELGPVYGVQWRSWPTPDGQHVDQIAQALDILKNNP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNVA ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYS Sbjct: 131 DSRRNIVSAWNVADLNNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSA 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA G + GEFI T GD H+Y+NH EQ QLSR PR PQ+ + + + Sbjct: 191 LTHMLAQQAGLKVGEFIWTGGDCHIYDNHREQVLTQLSREPRPYPQLTLR-KASSIFDYD 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++DFT+ Y+PH AI +V+V Sbjct: 250 FDDFTIEGYDPHPAIRGEVAV 270 >gi|312138557|ref|YP_004005893.1| thymidylate synthase [Rhodococcus equi 103S] gi|311887896|emb|CBH47208.1| thymidylate synthase [Rhodococcus equi 103S] Length = 273 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 156/261 (59%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR+DL++GFPL+TTKKVH KS+V+ELLWFL Sbjct: 14 YEDLLRLVMDTGTAKADRTGTGTRSVFGHQMRWDLAEGFPLITTKKVHLKSIVYELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L HGV+IWDEWAD DGELGP+YGVQWRSWP G IDQI+ ++++L+ +P Sbjct: 74 RGESNVKWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITKVIETLKTNP 133 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNVA +D MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 134 DSRRIIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 193 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A + G+FI T GD H+Y+NH +Q QLSR P P + +N + + Sbjct: 194 LTHMVAQQADLEVGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLNKRD-SIFDYT 252 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y H AI A V+V Sbjct: 253 FEDVEIVDYRHHPAIKAPVAV 273 >gi|317125309|ref|YP_004099421.1| thymidylate synthase [Intrasporangium calvum DSM 43043] gi|315589397|gb|ADU48694.1| thymidylate synthase [Intrasporangium calvum DSM 43043] Length = 271 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 158/271 (58%), Positives = 201/271 (74%), Gaps = 7/271 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV+ G ++ DRTG GT S FG+QMRFDL+ GFP +TTK++H +S++ ELL Sbjct: 1 MRQYLDLLDHVLTHGQEKSDRTGTGTLSVFGHQMRFDLADGFPAMTTKRLHLRSIIGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L G++IWDEWAD G+LGPIYG QWRSWP DG +DQI+ +++ +R Sbjct: 61 WFLRGDTNVRWLQERGITIWDEWADAKGDLGPIYGYQWRSWPTPDGRRVDQIARVIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DNG---KLSCQLYQRSGDVFLG 173 +P SRRHIVSAWNVA +D MALPPCH +FQFYV ++G +LSCQLYQRS D+FLG Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHTMFQFYVHPATESGGPRRLSCQLYQRSADIFLG 180 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 +PFNIASY+LLT M+A + + GEF+HTLGD HLY NH +QA LQL+R+P LP M I Sbjct: 181 VPFNIASYALLTQMIAQLTDLEPGEFVHTLGDAHLYLNHLDQARLQLTRTPHPLPTMRIT 240 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P D+ +F +DF L Y I A ++V Sbjct: 241 PGKKDIDAFDIDDFVLEDYVADPGIKAPIAV 271 >gi|212212099|ref|YP_002303035.1| thymidylate synthase [Coxiella burnetii CbuG_Q212] gi|212010509|gb|ACJ17890.1| thymidylate synthase [Coxiella burnetii CbuG_Q212] Length = 264 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 149/264 (56%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+ ++ G + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL Sbjct: 1 MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W DG +DQ+ +++ ++ Sbjct: 61 WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A + GEFI + GD H+YN H +Q QLSR PR LPQ+IIN + L Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + + DF++ +Y PH AI A V+V Sbjct: 241 DYNFNDFSIVNYHPHLAIKAPVAV 264 >gi|326316306|ref|YP_004233978.1| thymidylate synthase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373142|gb|ADX45411.1| thymidylate synthase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 279 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 160/269 (59%), Positives = 196/269 (72%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GTRS FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF Sbjct: 11 QYEDFMRHVYTHGIAKGDRTGTGTRSVFGHQMRFDLNEGFPLVTTKKVHLKSIITELLWF 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G S+ +L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS +V++LR + Sbjct: 71 LTGSSSNHWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISQVVETLRTN 130 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA +DKMAL PCH FQFYV + G+LSCQLYQRS D+FLG+P Sbjct: 131 PDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPPQAAGERGRLSCQLYQRSADIFLGVP 190 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A G+FI T GD H+Y+NHFEQ +LQL+R+P P + I Sbjct: 191 FNIASYALLTHMMAQQCNLDVGDFIWTGGDCHIYSNHFEQVELQLARAPHPYPTLHILRR 250 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +R+EDF +R Y H AI A V+V Sbjct: 251 PDSLFDYRFEDFEVRDYAHHPAIKAPVAV 279 >gi|255321180|ref|ZP_05362346.1| thymidylate synthase [Acinetobacter radioresistens SK82] gi|255301734|gb|EET80985.1| thymidylate synthase [Acinetobacter radioresistens SK82] Length = 280 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 160/280 (57%), Positives = 199/280 (71%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+H+++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRQYLDLLQHILEHGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + GELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPTGELGPVYGHQWRNFGATQNEDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 N DQIS ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V NGKLSCQLY Sbjct: 121 QQNGFDQISWLINEIKTNPNSRRLIVSGWNPKEASQVALPPCHTLFQFFVQNGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V Q G+F+ T GD HLY NHFEQA LQL R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLQVGDFVWTGGDTHLYANHFEQARLQLGRDP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + + F++ED + +Y H AI A V+V Sbjct: 241 LELCQLKLNPEVKSIFDFKFEDIEIINYHSHPAIKAPVAV 280 >gi|262375002|ref|ZP_06068236.1| thymidylate synthase [Acinetobacter lwoffii SH145] gi|262310015|gb|EEY91144.1| thymidylate synthase [Acinetobacter lwoffii SH145] Length = 280 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 161/280 (57%), Positives = 200/280 (71%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+H++ G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL Sbjct: 1 MRQYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + VSIWDEWA + GELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGASKNADNSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V NGKLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVHNGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V + G+F+ T GD HLY+NHFEQA LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLEVGDFVWTGGDTHLYSNHFEQAQLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I DL F++ED + YE H I A V+V Sbjct: 241 LGLCQLKLNPEIKDLFDFKFEDIEIVGYESHPGIKAPVAV 280 >gi|305681854|ref|ZP_07404658.1| thymidylate synthase [Corynebacterium matruchotii ATCC 14266] gi|305658327|gb|EFM47830.1| thymidylate synthase [Corynebacterium matruchotii ATCC 14266] Length = 272 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 156/261 (59%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S F Q+RFDL++ FPL+TTK+VH+ SVV ELLWFL Sbjct: 13 YEDLLRKILAEGTHKNDRTGTGTTSLFAQQLRFDLAESFPLITTKQVHFHSVVGELLWFL 72 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 G SNV++L +G+ IW+EWAD GELGP+YGVQWRSWP DG +DQIS+ + LRADP Sbjct: 73 SGSSNVAWLQENGIRIWNEWADDQGELGPVYGVQWRSWPTPDGGYVDQISASLAMLRADP 132 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV + KMALPPCH LFQ YV + +LSCQ+YQRS D+FLG+PFNIASYSL Sbjct: 133 DSRRNIVSAWNVGELPKMALPPCHLLFQLYVADNRLSCQVYQRSADMFLGVPFNIASYSL 192 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA G + GE I T GD H+Y+NH EQ LQL+R PR PQ+ + DL S+ Sbjct: 193 LTHMLAQQAGLRVGELIWTGGDCHIYDNHREQVALQLTRDPRPYPQLELR-KAADLFSYT 251 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + D +R Y PH I A+VSV Sbjct: 252 FSDVAVRGYNPHPRIPARVSV 272 >gi|308069291|ref|YP_003870896.1| thymidylate synthase (TS) (TSase) [Paenibacillus polymyxa E681] gi|305858570|gb|ADM70358.1| Thymidylate synthase (TS) (TSase) [Paenibacillus polymyxa E681] Length = 264 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL +++ G + DRTG GT S FG Q+RFDL+KGFPL+TTK+VH KSV+HELL Sbjct: 1 MRNYLELLEDILENGVKKEDRTGTGTLSVFGRQLRFDLAKGFPLVTTKRVHLKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD+ G LGP+YG QWRSW DG IDQI++++++++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADEQGNLGPVYGSQWRSWETTDGQHIDQIANVIEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA I+ M LPPCH +FQFYV GKLSC L RS D FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVAEIESMKLPPCHFVFQFYVAGGKLSCMLTMRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + GEFI + GDVH+Y+NH +Q QL R P LPQ+ I + Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHMQQVHTQLERDPYPLPQLKILRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF +YE H I A V++ Sbjct: 241 DYTYDDFAFENYEYHPGIKAPVAI 264 >gi|313886932|ref|ZP_07820635.1| thymidylate synthase [Porphyromonas asaccharolytica PR426713P-I] gi|312923629|gb|EFR34435.1| thymidylate synthase [Porphyromonas asaccharolytica PR426713P-I] Length = 265 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 158/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G++R DRTG GT FG+QM FDL+ GFPLLTTKK+H +S++HELL Sbjct: 1 MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119 WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G IDQ+ + + Sbjct: 61 WFLKGDTNLQYLHDNKVSIWDEWADETGDLGPIYGAQWRHWFDPHTGQTIDQMQQAIDLI 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWNVA + M L PCHCL Q+YV KL QLYQRS D+FLG+PFNIA Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGNKLDLQLYQRSADIFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M + L Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F Y+DFTL Y P+ I A VSV Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSV 265 >gi|330720247|gb|EGG98613.1| Thymidylate synthase [gamma proteobacterium IMCC2047] Length = 277 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 151/266 (56%), Positives = 193/266 (72%), Gaps = 2/266 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G D+ DRTGVGTRS FG Q+RFDL GFPL+TTK H KS++HELL Sbjct: 12 MQQYLDLMQDVLDNGVDKSDRTGVGTRSVFGRQLRFDLGAGFPLVTTKNCHLKSIIHELL 71 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD+ G LGP+YG QWR+W DG +DQIS +V +L+ Sbjct: 72 WFLQGDTNIRYLKENGVTIWDEWADEKGNLGPVYGEQWRAWRKPDGGTVDQISKLVHNLK 131 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V A+N + D+MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 132 HNPDSRRLLVVAYNPGVADEMALPPCHSLFQFYVANGRLSCQLYQRSADLFLGVPFNIAS 191 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPRTLPQMIINPNIVD 238 Y++LT MLA GEF+HT GD HLY+NH + QL R PR LP++ I Sbjct: 192 YAILTHMLAQQADLDVGEFVHTFGDCHLYHNHLTDDIVHEQLRRKPRKLPKLKIKRKPQS 251 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + Y+P+ I A ++V Sbjct: 252 MFDYCYEDFEIEGYDPYPTIKAPIAV 277 >gi|50083753|ref|YP_045263.1| thymidylate synthase [Acinetobacter sp. ADP1] gi|62901304|sp|Q6FER7|TYSY_ACIAD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|49529729|emb|CAG67441.1| thymidylate synthase (TS) (TSase) [Acinetobacter sp. ADP1] Length = 280 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 160/280 (57%), Positives = 198/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL Sbjct: 1 MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL H VSIWDEWA + GELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDHKVSIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGATQNSDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V +GKLSCQLY Sbjct: 121 KNDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I DL F++ED + Y+ H AI A V+V Sbjct: 241 LPLCQLKLNPEITDLFDFKFEDIEIVDYQSHPAIKAPVAV 280 >gi|281415580|ref|ZP_06247322.1| thymidylate synthase [Micrococcus luteus NCTC 2665] Length = 273 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 156/267 (58%), Positives = 193/267 (72%), Gaps = 6/267 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL V+ G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV ELLWFL Sbjct: 7 YEDLLADVMAHGAVKTDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVALELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV IW+EWAD+DGELGP+YGVQWRSWP DG IDQI+ +V+ +R +P Sbjct: 67 RGDSNVRWLQERGVRIWNEWADEDGELGPVYGVQWRSWPTPDGGHIDQIAKVVEQIRTNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------NGKLSCQLYQRSGDVFLGIPFN 177 SRRHIV+AWN A +D+MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFN Sbjct: 127 DSRRHIVTAWNPAEVDEMALPPCHALFQFYVSPGQDGAPGRLSCQLYQRSADLFLGVPFN 186 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 IASY+LLT+M+A G GEF+ T GDVH+Y NH EQ QLSR P P++ + Sbjct: 187 IASYALLTVMVAQQTGLTPGEFVWTGGDVHIYANHEEQVREQLSREPYPYPRLRLRRTPA 246 Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + Y H I A ++V Sbjct: 247 SIFDYDYEDFEVLDYRHHPTITAPIAV 273 >gi|239918228|ref|YP_002957786.1| thymidylate synthase [Micrococcus luteus NCTC 2665] gi|289705051|ref|ZP_06501462.1| thymidylate synthase [Micrococcus luteus SK58] gi|239839435|gb|ACS31232.1| thymidylate synthase [Micrococcus luteus NCTC 2665] gi|289558214|gb|EFD51494.1| thymidylate synthase [Micrococcus luteus SK58] Length = 276 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 156/267 (58%), Positives = 193/267 (72%), Gaps = 6/267 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL V+ G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV ELLWFL Sbjct: 10 YEDLLADVMAHGAVKTDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVALELLWFL 69 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV IW+EWAD+DGELGP+YGVQWRSWP DG IDQI+ +V+ +R +P Sbjct: 70 RGDSNVRWLQERGVRIWNEWADEDGELGPVYGVQWRSWPTPDGGHIDQIAKVVEQIRTNP 129 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------NGKLSCQLYQRSGDVFLGIPFN 177 SRRHIV+AWN A +D+MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFN Sbjct: 130 DSRRHIVTAWNPAEVDEMALPPCHALFQFYVSPGQDGAPGRLSCQLYQRSADLFLGVPFN 189 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 IASY+LLT+M+A G GEF+ T GDVH+Y NH EQ QLSR P P++ + Sbjct: 190 IASYALLTVMVAQQTGLTPGEFVWTGGDVHIYANHEEQVREQLSREPYPYPRLRLRRTPA 249 Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + Y H I A ++V Sbjct: 250 SIFDYDYEDFEVLDYRHHPTITAPIAV 276 >gi|77163769|ref|YP_342294.1| thymidylate synthase [Nitrosococcus oceani ATCC 19707] gi|254436106|ref|ZP_05049613.1| thymidylate synthase [Nitrosococcus oceani AFC27] gi|123595153|sp|Q3JEI2|TYSY_NITOC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|76882083|gb|ABA56764.1| thymidylate synthase [Nitrosococcus oceani ATCC 19707] gi|207089217|gb|EDZ66489.1| thymidylate synthase [Nitrosococcus oceani AFC27] Length = 264 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L++ ++ G +R DRTG GT S FG+QMRFDL +GFPL+TTKK+H +++ ELL Sbjct: 1 MKPYLELIQKILDTGVERDDRTGTGTWSIFGHQMRFDLRQGFPLITTKKLHIRAIFIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP DG +DQ++ + +R Sbjct: 61 WFLRGETNVKYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGGYLDQMAKTLTQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P+SRRH+V A+N A +D+MALPPCH LFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NHPHSRRHVVVAYNPACVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT ++A GEF+ T GDVHLY NH E A LQL+R P +LP + I L Sbjct: 181 YALLTHLIAQQCDLDVGEFVWTGGDVHLYRNHLEPARLQLTREPLSLPHLRIKRRPPSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++Y+D + Y+ + AI A +SV Sbjct: 241 EYQYDDLEIVDYQSYPAIKAAISV 264 >gi|294649226|ref|ZP_06726664.1| thymidylate synthase [Acinetobacter haemolyticus ATCC 19194] gi|292824893|gb|EFF83658.1| thymidylate synthase [Acinetobacter haemolyticus ATCC 19194] Length = 280 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 161/280 (57%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + GELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGATQNEDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 N DQI ++ ++ +P SRR IVS WN K+ALPPCH LFQF+V + KLSCQLY Sbjct: 121 QQNGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSRDP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEITDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|118602621|ref|YP_903836.1| thymidylate synthase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166231728|sp|A1AWQ8|TYSY_RUTMC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|118567560|gb|ABL02365.1| thymidylate synthase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 264 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD LR V G+++ DRTG+GT S FGYQMRFDLS GFPL+TTK+VH SVVHELL Sbjct: 1 MKQYLDFLRLVKNTGTNKTDRTGIGTTSLFGYQMRFDLSDGFPLITTKRVHLPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL +GV IW+EWADK+G+LGPIYGVQWR+W + G IDQI +++ ++ Sbjct: 61 WFLSGATNIKYLQENGVRIWNEWADKNGDLGPIYGVQWRNWQNVRGESIDQIMQVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV ++ MALPPCH FQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NTPDSRRIIVSAWNVGELENMALPPCHAFFQFYVALGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+FI + GD H+Y+NH +Q ++QL+R+P+TL + IN + Sbjct: 181 YALLTHMMAQQCDLEVGDFIWSGGDCHIYSNHTKQVEIQLARTPKTLATLKINNKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF +Y A I A V++ Sbjct: 241 DYNFEDFEFINYVFDAYIKATVAI 264 >gi|332300790|ref|YP_004442711.1| Thymidylate synthase [Porphyromonas asaccharolytica DSM 20707] gi|332177853|gb|AEE13543.1| Thymidylate synthase [Porphyromonas asaccharolytica DSM 20707] Length = 265 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 157/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G++R DRTG GT FG+QM FDL+ GFPLLTTKK+H +S++HELL Sbjct: 1 MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119 WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G IDQ+ + + Sbjct: 61 WFLKGDTNLQYLHDNKVSIWDEWADETGDLGPIYGAQWRHWFDPHTGQTIDQMQQALDLI 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWNVA + M L PCHCL Q+YV KL QLYQRS D+FLG+PFNIA Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGNKLDLQLYQRSADIFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M + L Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F Y+DFTL Y P+ I A VS+ Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSI 265 >gi|228469308|ref|ZP_04054334.1| thymidylate synthase [Porphyromonas uenonis 60-3] gi|228309207|gb|EEK17809.1| thymidylate synthase [Porphyromonas uenonis 60-3] Length = 265 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 158/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G++R DRTG GT FG+QM FDL+ GFPLLTTKK+H +S++HELL Sbjct: 1 MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119 WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G IDQ+ + + Sbjct: 61 WFLKGDTNLQYLHDNKVSIWDEWADEAGDLGPIYGAQWRHWFDPHTGQTIDQMQQALDLI 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWNVA + M L PCHCL Q+YV KL QLYQRS D+FLG+PFNIA Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGDKLDLQLYQRSADIFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M + L Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F Y+DFTL Y P+ I A VSV Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSV 265 >gi|94676836|ref|YP_588974.1| thymidylate synthase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|122988104|sp|Q1LSU0|TYSY_BAUCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|94219986|gb|ABF14145.1| thymidylate synthase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 264 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+R V G + DRT GT S FG+QMRF+LS GFPL+TTK+ H +S+++ELL Sbjct: 1 MKQYLELMRLVRTQGISKVDRTNTGTLSIFGHQMRFNLSHGFPLITTKRCHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL +H V+IWDEW ++ G+LGPIYG QWR+W DG+ IDQ+S ++ L+ Sbjct: 61 WFLNGDTNINYLRKHHVTIWDEWINEKGDLGPIYGRQWRAWGTADGSYIDQLSDVMLQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +MAL PCH LFQFYV NG LSCQLYQRS D+FLG+PFNI+S Sbjct: 121 HNPDSRRIIVSAWNVGEIKQMALAPCHVLFQFYVANGVLSCQLYQRSCDMFLGLPFNISS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q GEFI T GD+HLY NH +Q DLQL R+PR LPQ+II L Sbjct: 181 YALLIHMVAQQCDLQLGEFIWTGGDIHLYRNHLKQTDLQLKRNPRPLPQLIIKRRPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L Y+PH AI A+V+V Sbjct: 241 QYQFDDFYLSGYDPHPAIKAQVAV 264 >gi|225023101|ref|ZP_03712293.1| hypothetical protein CORMATOL_03149 [Corynebacterium matruchotii ATCC 33806] gi|224944324|gb|EEG25533.1| hypothetical protein CORMATOL_03149 [Corynebacterium matruchotii ATCC 33806] Length = 272 Score = 328 bits (840), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 155/261 (59%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S F Q+RFDL++ FPL+TTK+VH+ SVV ELLWFL Sbjct: 13 YEDLLRKILAEGTHKNDRTGTGTTSLFAQQLRFDLAESFPLITTKQVHFHSVVGELLWFL 72 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 G SNV++L +G+ IW+EWAD GELGP+YGVQWRSWP DG +DQIS+ + LRADP Sbjct: 73 SGSSNVAWLQENGIRIWNEWADDQGELGPVYGVQWRSWPTPDGRYVDQISASLAMLRADP 132 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV + KMALPPCH LFQ YV + +LSCQ+YQRS D+FLG+PFNIASYSL Sbjct: 133 DSRRNIVSAWNVGELPKMALPPCHLLFQLYVADNRLSCQVYQRSADMFLGVPFNIASYSL 192 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 L MLA G + GE I T GD H+Y+NH EQ LQL+R PR PQ+ + DL S+ Sbjct: 193 LAHMLAQQAGLRVGELIWTGGDCHIYDNHREQVALQLTRDPRPYPQLELR-KAADLFSYT 251 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + D +R Y+PH I A+VSV Sbjct: 252 FSDVVVRGYDPHPRIPARVSV 272 >gi|315646630|ref|ZP_07899747.1| thymidylate synthase [Paenibacillus vortex V453] gi|315277956|gb|EFU41277.1| thymidylate synthase [Paenibacillus vortex V453] Length = 264 Score = 328 bits (840), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 150/264 (56%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+ ++ G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL Sbjct: 1 MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLMTTKRIHLKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N+ YL +GV IWDEWAD++G+LGP+YG QWR+W DG IDQI+++++S++ Sbjct: 61 WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGQHIDQIANVIESIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA I+ M LPPCH +FQFYV GKLSC L RS D FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVAEIENMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + GEFI + GDVH+Y+NH EQ QL R P LP++II + Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHMEQVKTQLEREPYELPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF Y+ H I A V+V Sbjct: 241 DYTFDDFEFEGYQYHPTIKATVAV 264 >gi|262374153|ref|ZP_06067430.1| thymidylate synthase [Acinetobacter junii SH205] gi|262311164|gb|EEY92251.1| thymidylate synthase [Acinetobacter junii SH205] Length = 280 Score = 328 bits (840), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 161/280 (57%), Positives = 198/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRTYLDLLQHILDNGGDKDDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + GELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGASQNEDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 N DQI +V ++ +P SRR IVS WN K+ALPPCH LFQF+V + KLSCQLY Sbjct: 121 QQNGFDQIKWLVNEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVHDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLDVGDFVWTGGDTHLYANHFEQAKLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP+I D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPDIKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|268315914|ref|YP_003289633.1| thymidylate synthase [Rhodothermus marinus DSM 4252] gi|262333448|gb|ACY47245.1| thymidylate synthase [Rhodothermus marinus DSM 4252] Length = 283 Score = 327 bits (839), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 160/283 (56%), Positives = 196/283 (69%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY + LR++++ G+ R DRTG GT S FGYQMRFDL +GFPL+TTKK+H KSVVHELL Sbjct: 1 MRQYHEFLRYILERGTRREDRTGTGTISVFGYQMRFDLQEGFPLVTTKKIHIKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YLH HGV+IWDEWA ++GELGPIYG QWR W DG IDQI+ +V+S+R Sbjct: 61 WFLRGDTNLRYLHEHGVTIWDEWATEEGELGPIYGKQWRRWLAPDGREIDQIAEVVRSIR 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYV------DNGKLSC 161 P+SRRH+VSAWNVA + +MAL PCH LFQFYV + +LSC Sbjct: 121 ERPWSRRHVVSAWNVADLPDERLSPQENVRRGRMALAPCHVLFQFYVAERPEWERPRLSC 180 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D FLG+PFNIASYSLLT M+A GEFI T GD H+Y NH EQ + LS Sbjct: 181 QLYQRSADAFLGVPFNIASYSLLTHMIAQQTDLDVGEFIWTGGDCHIYLNHLEQVEELLS 240 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P LP+++I + +RYEDF +Y H I A ++V Sbjct: 241 REPYPLPKLVIKRRPPSIFDYRYEDFEFVNYRHHPPIKAPIAV 283 >gi|89901757|ref|YP_524228.1| thymidylate synthase [Rhodoferax ferrireducens T118] gi|122996836|sp|Q21U56|TYSY_RHOFD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|89346494|gb|ABD70697.1| thymidylate synthase [Rhodoferax ferrireducens T118] Length = 277 Score = 327 bits (839), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 160/269 (59%), Positives = 190/269 (70%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D LRHV G + DRTG GT S FGYQMRFDL++GFPL+TTKKV K++V ELLWF Sbjct: 9 QYEDFLRHVSTHGVFKADRTGTGTTSVFGYQMRFDLNEGFPLVTTKKVFLKAIVLELLWF 68 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L G +IWDEWA DG+LGP+YGVQWRSWP DG IDQI+ +++L+ + Sbjct: 69 LRGDSNVKWLQERGCTIWDEWARPDGDLGPVYGVQWRSWPTPDGGHIDQIAEAIKTLKTN 128 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA +DKMAL PCH FQFYV GKLSCQLYQRS D+FLG+P Sbjct: 129 PDSRRIIVSAWNVAELDKMALMPCHAFFQFYVAPAQTPGGKGKLSCQLYQRSADIFLGVP 188 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A G+FI T GD H+Y+NH EQ LQLSR+P P + I Sbjct: 189 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHVYSNHAEQVALQLSRTPFAYPTLSIKRK 248 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + YE H AI A V+V Sbjct: 249 PASIFDYAYEDFEVLGYECHPAIKAPVAV 277 >gi|78484917|ref|YP_390842.1| thymidylate synthase [Thiomicrospira crunogena XCL-2] gi|123769134|sp|Q31I55|TYSY_THICR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|78363203|gb|ABB41168.1| thymidylate synthase [Thiomicrospira crunogena XCL-2] Length = 277 Score = 327 bits (839), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 154/277 (55%), Positives = 194/277 (70%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+H+ + G + DRTG GTRS FGYQMRF+L +GFPL+TTKK+H KS+V+ELL Sbjct: 1 MKQYLDLLKHITETGVAKGDRTGTGTRSVFGYQMRFNLEEGFPLVTTKKLHLKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL HGV IWDEWA + G+LGPIYG QW +W +G+ I+QI ++Q+L+ Sbjct: 61 WFLNGDTNNQYLKEHGVRIWDEWATETGDLGPIYGRQWVAWEKPNGDTINQIEEVIQTLK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN A + +MAL CH FQFYV NGKLSCQLYQRS Sbjct: 121 KNPNSRRMLVSAWNPADLPDESMSPQENVKQGRMALATCHAFFQFYVANGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASY+LLT M+A + GEF+ T GDVHLYNN EQA+LQ+SR+P L Sbjct: 181 ADTFLGVPFNIASYALLTHMIAQQTDLEVGEFVWTGGDVHLYNNTLEQAELQMSRTPYAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I + + ++DF + YE H I A VSV Sbjct: 241 PKLKIKRKPPSIFDYEFDDFEIEGYESHPHIKAVVSV 277 >gi|296135862|ref|YP_003643104.1| thymidylate synthase [Thiomonas intermedia K12] gi|295795984|gb|ADG30774.1| thymidylate synthase [Thiomonas intermedia K12] Length = 279 Score = 327 bits (839), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 159/272 (58%), Positives = 193/272 (70%), Gaps = 11/272 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+RHV G D+ DRTG GTRS FG+QMRFDLS GFPL+TTK+VH+KS+ +ELLWFL Sbjct: 8 YEDLMRHVFTHGQDKTDRTGTGTRSVFGHQMRFDLSAGFPLITTKRVHFKSIAYELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 RG+SNV +L HGV+IWDEWA +DGELGP+YGVQWRSWP D IDQIS +++ L Sbjct: 68 RGESNVRWLQEHGVTIWDEWAREDGELGPVYGVQWRSWPAPTADDPHRSIDQISEVLRQL 127 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFL 172 R P SRR IVSAWNV I +MALPPCH FQFYV + G+LSCQLYQRS D+FL Sbjct: 128 RTQPDSRRIIVSAWNVGQIAEMALPPCHAFFQFYVAPPRQPGEPGRLSCQLYQRSADIFL 187 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G+PFNIASY+LLT+M+A G+F+ T GD HLY+NHF Q QLSR+P P + Sbjct: 188 GVPFNIASYALLTLMIAQQTDLLPGDFVWTGGDCHLYSNHFAQVQEQLSRAPYPYPTLEF 247 Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + ++DF L Y+ H AI A V+V Sbjct: 248 ARKPESLFDYTFDDFVLSHYQHHPAIKAPVAV 279 >gi|262369944|ref|ZP_06063271.1| thymidylate synthase [Acinetobacter johnsonii SH046] gi|262314983|gb|EEY96023.1| thymidylate synthase [Acinetobacter johnsonii SH046] Length = 280 Score = 327 bits (838), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 199/280 (71%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL Sbjct: 1 MKTYLDLLQHILDHGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPD-------Y 104 WFL+GD+NV YL + VSIWDEW+ + GELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLQDNKVSIWDEWSTAEQTARFGRPEGELGPVYGHQWRNFGATKKADGLY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI+ +V ++ +P SRR IVS WN ++ALPPCH LFQF+V NGKLSCQLY Sbjct: 121 EKDGFDQIAWLVNEIKTNPNSRRLIVSGWNPQEAGQVALPPCHTLFQFFVHNGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + D+ F++ED + YE H I A V+V Sbjct: 241 LGLCQLKLNPAVKDIFDFKFEDIEIVGYESHPGIKAPVAV 280 >gi|302556750|ref|ZP_07309092.1| thymidylate synthase [Streptomyces griseoflavus Tu4000] gi|302474368|gb|EFL37461.1| thymidylate synthase [Streptomyces griseoflavus Tu4000] Length = 265 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 156/262 (59%), Positives = 193/262 (73%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL+ V+ G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH KS+V+ELLWF Sbjct: 5 QYEDLLQLVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLKSIVYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI ++ +LR D Sbjct: 65 LRGDSNVRWLQEHGVTIWDEWADDNGDLGPVYGAQWRSWPTPDGRHIDQIEEVLGTLRRD 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV+ + KMAL PCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRMIVSAWNVSELSKMALAPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G + G+FI T GD H+Y+NH Q QLSR+P P + + L + Sbjct: 185 LLTHMVAQQSGLEPGDFIWTGGDCHIYDNHVAQVTEQLSRTPFAFPALELR-RADSLFDY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 Y D + Y H AI A V+V Sbjct: 244 SYSDVQVAGYRHHPAIKAPVAV 265 >gi|332666783|ref|YP_004449571.1| Thymidylate synthase [Haliscomenobacter hydrossis DSM 1100] gi|332335597|gb|AEE52698.1| Thymidylate synthase [Haliscomenobacter hydrossis DSM 1100] Length = 301 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 165/306 (53%), Positives = 205/306 (66%), Gaps = 47/306 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY LL+H++K G + DRTG GT S FGYQ+RFDL+ GFPL+TTKKVH KS++HELL Sbjct: 1 MQQYHTLLQHILKNGVRKHDRTGTGTISVFGYQVRFDLNDGFPLITTKKVHIKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------------ADK 86 WFL+GD+N+ YL R+GV IW+EW D Sbjct: 61 WFLKGDTNIQYLVRNGVGIWNEWPFQFWLQNENPDLAQTKYSPAWKDKLSEFVERIKTDD 120 Query: 87 D-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN---VALI 138 D G LGP+YG QWR +++G +DQI +V +R P SRR +VSAWN + ++ Sbjct: 121 DFATQWGNLGPVYGQQWR---NFEG--VDQIVQVVNDIRRSPDSRRLLVSAWNPKEIPVM 175 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 K LPPCH LFQFYV GKLSCQLYQRS DVFLG+PFNIASY+LLT+M+A V G Q GE Sbjct: 176 VKSGLPPCHALFQFYVAEGKLSCQLYQRSADVFLGVPFNIASYALLTLMMAQVCGLQPGE 235 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 FIH+ GD HLY NH EQA +QLSR PR+LPQM +NP + ++ F+YEDFTL Y+P+ AI Sbjct: 236 FIHSFGDAHLYLNHLEQAQIQLSRQPRSLPQMKLNPAVREIFDFQYEDFTLSDYDPYPAI 295 Query: 259 LAKVSV 264 A+VSV Sbjct: 296 KAEVSV 301 >gi|323356765|ref|YP_004223161.1| thymidylate synthase [Microbacterium testaceum StLB037] gi|323273136|dbj|BAJ73281.1| thymidylate synthase [Microbacterium testaceum StLB037] Length = 269 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 153/261 (58%), Positives = 191/261 (73%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G + DRTG GT S FG Q+RFDL++GFPL+TTK+VH KS+V+ELLWFL Sbjct: 9 YEDLLRDVLETGVHKSDRTGTGTTSVFGRQIRFDLAEGFPLITTKRVHLKSIVYELLWFL 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L +GV+IWDEWAD +GELGP+YGVQWRSWP DG IDQIS +++ +R DP Sbjct: 69 RGESNVGWLKDNGVTIWDEWADGEGELGPVYGVQWRSWPTADGGTIDQISQVIEQIRRDP 128 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWN A I MAL PCH LFQFYV GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 129 DSRRLIVSAWNPADIPDMALAPCHALFQFYVAEGKLSCQLYQRSADMFLGVPFNIASYAL 188 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT+M+A G + G+F+ T GD H+Y+NH EQ QL+R P P + + + Sbjct: 189 LTLMVAQQTGLEPGDFVWTGGDCHVYDNHREQVQEQLTREPYPYPTLRFARTPESIFDYT 248 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y+D + Y+ H AI V+V Sbjct: 249 YDDILVEDYQHHPAIRGAVAV 269 >gi|168335169|ref|ZP_02693275.1| thymidylate synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 259 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 146/264 (55%), Positives = 196/264 (74%), Gaps = 5/264 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+++++ G + DRTGVGT STFGYQMRF+L++GFPL+T K+ ++K + HELL Sbjct: 1 MKQYKDLVQYIMDNGVYKEDRTGVGTISTFGYQMRFNLAEGFPLVTLKRTYFKGIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL V IWDEWAD++G+LGP+YG QWRS+ +DQI+ +++ ++ Sbjct: 61 WFLSGXTNIKYLVDKNVHIWDEWADENGDLGPVYGAQWRSFSG-----VDQIAHVIEEIK 115 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IV+AWNV I+KMALPPCH FQFYV GKLSCQ+YQRS D FLG+PFNIAS Sbjct: 116 SNPDSRRLIVTAWNVPEIEKMALPPCHMFFQFYVAEGKLSCQMYQRSADTFLGVPFNIAS 175 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLL M+A+V + G+F+HT+GD H+Y NH +Q L L R P++LP++ I + + Sbjct: 176 YSLLVHMIAAVTDLEVGDFVHTIGDAHIYTNHLQQVKLMLKREPKSLPKIRILRKVDSIF 235 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y PH AI A+V+V Sbjct: 236 DFRYEDFELLDYNPHKAIKAEVAV 259 >gi|332531037|ref|ZP_08406956.1| thymidylate synthase [Hylemonella gracilis ATCC 19624] gi|332039518|gb|EGI75925.1| thymidylate synthase [Hylemonella gracilis ATCC 19624] Length = 283 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 158/269 (58%), Positives = 196/269 (72%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT S FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF Sbjct: 15 QYEDFMRHVHTHGVAKSDRTGTGTTSVFGHQMRFDLNEGFPLVTTKKVHLKSIILELLWF 74 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G SN ++L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS ++++L+++ Sbjct: 75 LTGSSNNNWLKDRGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKSN 134 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + KMAL PCH FQFYV + GKLSCQLYQRS D+FLG+P Sbjct: 135 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGVP 194 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A G G+FI T GD H+Y+NH EQ +LQLSR P P + I Sbjct: 195 FNIASYALLTHMVAQQCGLGVGDFIWTGGDCHIYSNHHEQVELQLSRQPYPYPVLHIKRQ 254 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++YEDF +R Y+ H AI A V+V Sbjct: 255 PDSIFDYQYEDFEVRDYQCHPAIKAPVAV 283 >gi|237785076|ref|YP_002905781.1| Thymidylate synthase [Corynebacterium kroppenstedtii DSM 44385] gi|237757988|gb|ACR17238.1| Thymidylate synthase [Corynebacterium kroppenstedtii DSM 44385] Length = 275 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 159/261 (60%), Positives = 189/261 (72%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++K G+ R DRTG GT S FG QMRFDLS+ FPLLTTKKV + + EL WFL Sbjct: 16 YEDLLREILKDGNHRDDRTGTGTTSLFGKQMRFDLSEYFPLLTTKKVFMRGLSEELFWFL 75 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SN+ L V IWDEWAD+DG LGPIYGVQWRSWP DG IDQIS + ++ +P Sbjct: 76 RGESNIHSLLEKNVHIWDEWADEDGNLGPIYGVQWRSWPTPDGGTIDQISQALDMIKNNP 135 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNVA + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 136 TSRRIIVSAWNVADVPSMALPPCHLLFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 195 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G GEFI T GD H+Y+NH +Q DLQLSR PR P + + DL S+ Sbjct: 196 LTHMMAQQAGLDVGEFIWTGGDCHIYDNHRDQIDLQLSRDPRPYPTLSLT-KAADLFSYT 254 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + +Y PH AI A V+V Sbjct: 255 WDDVDILNYNPHPAIKAPVAV 275 >gi|296118294|ref|ZP_06836875.1| thymidylate synthase [Corynebacterium ammoniagenes DSM 20306] gi|295968852|gb|EFG82096.1| thymidylate synthase [Corynebacterium ammoniagenes DSM 20306] Length = 270 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 150/261 (57%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL+ V++ G+++ DRTG GTRS FG+Q+R+DL++ FPLLTTKKV++ V+ ELLWFL Sbjct: 11 YEELLKKVLETGAEKSDRTGTGTRSLFGHQLRYDLNESFPLLTTKKVYFHGVIGELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNVS+L + + IW+EWAD +GELGP+YGVQWRSWP DG IDQI +++ L+ +P Sbjct: 71 RGESNVSWLQENKIRIWNEWADANGELGPVYGVQWRSWPTPDGQHIDQIETVMDQLKNNP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ +DKMAL PCH LFQ YV GKLS Q+YQRS D+FLG+PFNIASY+ Sbjct: 131 DSRRILVSAWNVSELDKMALMPCHLLFQLYVAEGKLSMQVYQRSADMFLGVPFNIASYAA 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GE I T GDVH+YNNH EQ QL+R+PR PQ+ +N + + Sbjct: 191 LTHMFAQQAGLEVGELIWTGGDVHIYNNHIEQVKEQLARTPRAYPQLKLN-KAKSIFDYN 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++DF L Y+PH I A VSV Sbjct: 250 FDDFELEGYDPHPTIKAPVSV 270 >gi|146329360|ref|YP_001209479.1| thymidylate synthase [Dichelobacter nodosus VCS1703A] gi|166231696|sp|A5EVG5|TYSY_DICNV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|146232830|gb|ABQ13808.1| thymidylate synthase [Dichelobacter nodosus VCS1703A] Length = 258 Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 156/250 (62%), Positives = 193/250 (77%), Gaps = 6/250 (2%) Query: 15 GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74 G D+ DRTGVGTRS FGYQMRFDL+ GFPLLTTKK+H+KS+V+ELLWFL G++N++YL++ Sbjct: 15 GVDKSDRTGVGTRSLFGYQMRFDLAAGFPLLTTKKMHFKSIVYELLWFLSGNTNIAYLNQ 74 Query: 75 HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 +GVSIWDEWADK+G+LGPIYG QWR+W D QI ++ SL+ +P SRR +VS+WN Sbjct: 75 NGVSIWDEWADKNGDLGPIYGKQWRNWAGRD-----QIHQVLTSLKTNPDSRRMLVSSWN 129 Query: 135 VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 VA +++MALPPCH LFQFYV NG+LSCQLYQRS DVFLG+PFNIASY+LLTMM+A Sbjct: 130 VAQLEEMALPPCHVLFQFYVANGRLSCQLYQRSADVFLGVPFNIASYALLTMMMAQQADL 189 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 + G+F+ T GDVHLY NHF QA QL R P LP+M I + + +EDF L Y Sbjct: 190 ELGDFVWTGGDVHLYRNHFAQAQEQLKRQPYPLPKMHIK-RAKSIDDYVFEDFLLVDYRC 248 Query: 255 HAAILAKVSV 264 HAAI A V+V Sbjct: 249 HAAIKAPVAV 258 >gi|312795490|ref|YP_004028412.1| Thymidylate synthase [Burkholderia rhizoxinica HKI 454] gi|312167265|emb|CBW74268.1| Thymidylate synthase (EC 2.1.1.45) [Burkholderia rhizoxinica HKI 454] Length = 278 Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 152/274 (55%), Positives = 196/274 (71%), Gaps = 13/274 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL +L+ +++ G+ + DRTG GTRS FG R DLS GFPLLTTKK+H +S++HELLWFL Sbjct: 5 YLSILKDLLERGTLKSDRTGTGTRSLFGVSYRHDLSTGFPLLTTKKLHVRSILHELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+N+ YLH +GV+IWDEWA DGELGP+YG QWRSW + DG DQ+ +++ SLR P Sbjct: 65 RGDTNIRYLHENGVTIWDEWATPDGELGPVYGAQWRSWRNPDGTRTDQVQALLDSLRTKP 124 Query: 124 YSRRHIVSAWNV-------------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 SRRHI++AWNV AL +M+LPPCH L+QFY+ GKLSC L QRSGD Sbjct: 125 DSRRHILNAWNVSFLPDESKSPEQNALEGRMSLPPCHILYQFYIAEGKLSCMLTQRSGDW 184 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 FLGIP+N AS + LT M+A +G Q GE +H++GD HLY NH EQA LQL+R+PR LP++ Sbjct: 185 FLGIPYNCASVAFLTHMIAQQLGLQPGEIVHSIGDAHLYLNHVEQARLQLTRTPRPLPRL 244 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 II L +R+EDF + Y+PH I A ++V Sbjct: 245 IIKREPDTLFDYRFEDFEIAGYDPHPHIAAPIAV 278 >gi|294340056|emb|CAZ88424.1| thymidylate synthase (TS) (TSase) [Thiomonas sp. 3As] Length = 279 Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 159/272 (58%), Positives = 192/272 (70%), Gaps = 11/272 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+RHV G D+ DRTG GTRS FG+QMRFDLS GFPL+TTK+VH+KS+ +ELLWFL Sbjct: 8 YEDLMRHVFTHGQDKTDRTGTGTRSVFGHQMRFDLSAGFPLITTKRVHFKSIAYELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 RG+SNV +L HGV+IWDEWA +DGELGP+YGVQWRSWP D IDQIS +++ L Sbjct: 68 RGESNVRWLQEHGVTIWDEWAREDGELGPVYGVQWRSWPAPTADDPHRSIDQISEVLRQL 127 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFL 172 R P SRR IVSAWNV I +MALPPCH FQFYV G+LSCQLYQRS D+FL Sbjct: 128 RTQPDSRRIIVSAWNVGQIAEMALPPCHAFFQFYVAPPRQPGGPGRLSCQLYQRSADIFL 187 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G+PFNIASY+LLT+M+A G+F+ T GD HLY+NHF Q QLSR+P P + Sbjct: 188 GVPFNIASYALLTLMIAQQTDLLPGDFVWTGGDCHLYSNHFAQVQEQLSRAPYPYPTLEF 247 Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + ++DF L Y+ H AI A V+V Sbjct: 248 ARKPESLFDYTFDDFVLSHYQHHPAIKAPVAV 279 >gi|25027475|ref|NP_737529.1| thymidylate synthase [Corynebacterium efficiens YS-314] gi|259507119|ref|ZP_05750019.1| thymidylate synthase [Corynebacterium efficiens YS-314] gi|29337062|sp|Q8FR47|TYSY_COREF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|23492757|dbj|BAC17729.1| putative thymidylate synthase [Corynebacterium efficiens YS-314] gi|259165397|gb|EEW49951.1| thymidylate synthase [Corynebacterium efficiens YS-314] Length = 267 Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 155/261 (59%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR + G+ + DRTG GT S FG Q+R++L +GFPLLTTKKVH+ SVV ELLWFL Sbjct: 8 YEDLLRTIRDEGAHKDDRTGTGTTSLFGQQIRYNLQEGFPLLTTKKVHFHSVVGELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L + + IW+EWAD+DGELGP+YGVQWRSWP DG IDQIS ++ L+ +P Sbjct: 68 RGDSNVRWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISRALEMLKNNP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 128 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAL 187 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A + GEFI T GD H+Y+NH EQ D QLSR+ R P + +N L + Sbjct: 188 LTHMFAQQADLEVGEFIWTGGDCHIYDNHTEQVDEQLSRAARPYPTLELN-KAASLFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + +Y+PH I KV+V Sbjct: 247 FEDIAVSNYDPHPLIRGKVAV 267 >gi|167752654|ref|ZP_02424781.1| hypothetical protein ALIPUT_00910 [Alistipes putredinis DSM 17216] gi|167659723|gb|EDS03853.1| hypothetical protein ALIPUT_00910 [Alistipes putredinis DSM 17216] Length = 299 Score = 325 bits (832), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 163/298 (54%), Positives = 195/298 (65%), Gaps = 35/298 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR + K G + DRTG GTRS FGYQMRFDL GFPLLTTKKV K V++ELL Sbjct: 1 MQQYLDLLRKIRKDGIVKSDRTGTGTRSIFGYQMRFDLEAGFPLLTTKKVFLKGVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK---------------------------------- 86 WFL+GD+N+ YL HGV IWD A + Sbjct: 61 WFLQGDTNIKYLLDHGVHIWDNDAYRYYNELCVRHGVLPLEREAFLDAVRREEPSSIDGY 120 Query: 87 -DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 G+L +YG QWRSWP DG IDQI ++ ++ P SRR +VSAWNVA +D MALPP Sbjct: 121 RPGDLNHVYGYQWRSWPRPDGGCIDQIRQVIDQIKHSPDSRRMLVSAWNVAEVDDMALPP 180 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 CH LFQFYV G+LSCQLYQRS D FLG+PFNIASY+LLTMM+A G + G+F+HTLGD Sbjct: 181 CHVLFQFYVAGGRLSCQLYQRSADTFLGVPFNIASYALLTMMIAQECGLRPGDFVHTLGD 240 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 HLY NH +Q QLSR+PR LP + +NP + + FRYEDFTL +Y+P AI A +S Sbjct: 241 AHLYLNHADQVAEQLSRTPRPLPTLRLNPAVRSVFDFRYEDFTLENYDPWPAIKAPMS 298 >gi|111019241|ref|YP_702213.1| thymidylate synthase [Rhodococcus jostii RHA1] gi|123046371|sp|Q0SEI1|TYSY_RHOSR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|110818771|gb|ABG94055.1| thymidylate synthase [Rhodococcus jostii RHA1] Length = 266 Score = 325 bits (832), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 154/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GT+S FG+QMR++L+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 7 YEDLLRLVMDTGTPKADRTGTGTKSVFGHQMRWNLADGFPLITTKKVHLKSIVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +GV+IWDEWAD DGELGP+YGVQWRSWP G IDQI+ +++L+++P Sbjct: 67 RGDSNVKWLQDNGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITQTIETLKSNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGDIPQMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G + G+FI T GD H+Y+NH +Q QLSR P P + +N + + Sbjct: 187 LTHMVAQQAGLEPGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLNKR-ESIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y H AI A V+V Sbjct: 246 FEDVEIVDYRHHPAIKAPVAV 266 >gi|226361376|ref|YP_002779154.1| thymidylate synthase [Rhodococcus opacus B4] gi|226239861|dbj|BAH50209.1| thymidylate synthase [Rhodococcus opacus B4] Length = 267 Score = 324 bits (831), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 156/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR++L+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 8 YEDLLRLVMDTGTPKADRTGTGTRSVFGHQMRWNLADGFPLVTTKKVHLKSIVYELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +GV+IWDEWAD DGELGP+YGVQWRSWP G IDQIS +++L+++P Sbjct: 68 RGDSNVKWLQDNGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQISQTIETLKSNP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 128 DSRRIIVSAWNVGDIPQMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 187 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G + G+FI T GD H+Y+NH +Q QLSR P P + +N + + Sbjct: 188 LTHMVAQQAGLEPGDFIWTGGDCHIYDNHVDQVAEQLSREPLPYPTLKLN-RRDSIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y H AI A V+V Sbjct: 247 FEDVEIVDYRHHPAIKAPVAV 267 >gi|219883095|ref|YP_002477705.1| thymidylate synthase [Arthrobacter chlorophenolicus A6] gi|219862101|gb|ACL42442.1| thymidylate synthase [Arthrobacter chlorophenolicus A6] Length = 276 Score = 324 bits (831), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 156/269 (57%), Positives = 192/269 (71%), Gaps = 8/269 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL V G+ + DRTG GT S FG Q+RFDLS+GFPL+ TKKVHW SV +ELLWFL Sbjct: 8 YEDLLAEVAALGAAKGDRTGTGTTSVFGRQIRFDLSEGFPLIWTKKVHWPSVANELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV +L GV IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+S+R +P Sbjct: 68 RGETNVRWLQERGVKIWDEWADENGDLGPVYGSQWRSWPTPDGGQIDQIANVVESIRNNP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFN 177 SRRHIV+AWN A +D MALPPCH LFQFYV GKLSCQLYQRS D+FLG+PFN Sbjct: 128 NSRRHIVTAWNPAEVDNMALPPCHALFQFYVAPGTDGGPGKLSCQLYQRSADMFLGVPFN 187 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPN 235 IASY+LLT M+A G GEFI T GDVH+Y+NH +Q QL R R P++ N Sbjct: 188 IASYALLTHMVAQQTGLDVGEFIWTGGDVHIYDNHTDQVAEQLGRLDEVRAYPELKFNRV 247 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + +EDF + Y+PH I A V+V Sbjct: 248 PDSIFDYTFEDFEVVGYDPHPLIKAPVAV 276 >gi|227548298|ref|ZP_03978347.1| thymidylate synthase [Corynebacterium lipophiloflavum DSM 44291] gi|227079616|gb|EEI17579.1| thymidylate synthase [Corynebacterium lipophiloflavum DSM 44291] Length = 266 Score = 324 bits (831), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 155/261 (59%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ GS + DRTG GT S FG Q+R+DLS+ FPLLTTKKV++K VV ELLWFL Sbjct: 7 YEDLLRDILENGSPKGDRTGTGTLSVFGRQLRYDLSQSFPLLTTKKVYFKGVVGELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L + + IW+EWAD+DGELGP+YGVQWRSWP DG IDQIS ++ LR DP Sbjct: 67 RGESNVRWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISESLRLLREDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNV+ +DKMAL PCH LFQ YV +G+LS Q+YQRS D+FLG+PFNIASYSL Sbjct: 127 ESRRNLVSAWNVSELDKMALMPCHLLFQLYVADGRLSMQVYQRSADMFLGVPFNIASYSL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT+M A G GE I T GD H+YNNH EQ QLSR PR PQ+ + L + Sbjct: 187 LTLMFAQQAGLTVGELIWTGGDCHIYNNHIEQVKEQLSREPRPYPQLELR-KAPSLFEYS 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y+PH I A+V+V Sbjct: 246 FDDIKVVGYDPHPTITAEVAV 266 >gi|172057750|ref|YP_001814210.1| thymidylate synthase [Exiguobacterium sibiricum 255-15] gi|171990271|gb|ACB61193.1| Thymidylate synthase [Exiguobacterium sibiricum 255-15] Length = 264 Score = 324 bits (831), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 141/264 (53%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L + ++ G + DRTG GT S FG+QMRF L GFP++TTKK+H KS++HEL+ Sbjct: 1 MKQYHQLCQEILTNGVKKEDRTGTGTISIFGHQMRFSLQDGFPMVTTKKLHMKSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ G++N+SYL +GV IW+EWAD++G LGP+YG QWRS+P DG +DQ++ +++ ++ Sbjct: 61 WFISGETNISYLQENGVRIWNEWADENGNLGPVYGAQWRSFPKPDGTTVDQLADVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN +++MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 VNPDSRRLIVSAWNPGQLEEMALPPCHLLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + G+F+HTLGD H+Y+NH +Q +LQLSR+P+ LP + + + Sbjct: 181 YALLTHMIAHVCKLEVGDFVHTLGDSHIYSNHLDQVNLQLSRNPKPLPTIRFAREVERIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++D + Y+P I V+V Sbjct: 241 DFTFDDIIIEGYDPDPHIKGVVAV 264 >gi|323253293|gb|EGA37122.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] Length = 252 Score = 324 bits (831), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 145/247 (58%), Positives = 187/247 (75%) Query: 18 RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGV 77 D TG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V Sbjct: 6 ENDGTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNV 65 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 +IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ DP SRR IVSAWNV Sbjct: 66 TIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGE 125 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LL M+A G Sbjct: 126 LDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVG 185 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 +F+ T GD HLY+NH EQ LQLSR PR LP+++I L +R++DF + Y+PH Sbjct: 186 DFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPG 245 Query: 258 ILAKVSV 264 I A V++ Sbjct: 246 IKAPVAI 252 >gi|261406249|ref|YP_003242490.1| thymidylate synthase [Paenibacillus sp. Y412MC10] gi|261282712|gb|ACX64683.1| thymidylate synthase [Paenibacillus sp. Y412MC10] Length = 264 Score = 324 bits (831), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 150/264 (56%), Positives = 192/264 (72%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+ ++ G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL Sbjct: 1 MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLMTTKRIHLKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N+ YL +GV IWDEWAD++G+LGP+YG QWR+W DG IDQI+ ++ S++ Sbjct: 61 WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGRHIDQIAGVIDSIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA ID M LPPCH +FQFYV GKLSC L RS D FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVAEIDNMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GEFI + GDVH+Y+NH EQ QL R P LP+++I + Sbjct: 181 YALLTHMVAQQCDLEPGEFIWSGGDVHIYSNHMEQVRTQLEREPYALPKLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF Y+ H I A V+V Sbjct: 241 DYTFEDFEFEGYQYHPTIKATVAV 264 >gi|317508366|ref|ZP_07966039.1| thymidylate synthase [Segniliparus rugosus ATCC BAA-974] gi|316253323|gb|EFV12720.1| thymidylate synthase [Segniliparus rugosus ATCC BAA-974] Length = 270 Score = 324 bits (831), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 156/263 (59%), Positives = 196/263 (74%), Gaps = 5/263 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G +R DRTG GT S FG+Q+R+DL+KGFPL+TTKKVH KS+V+ELLWFL Sbjct: 11 YEDLLRLVLEQGVERSDRTGTGTLSVFGHQLRYDLAKGFPLITTKKVHLKSIVYELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+NV +L GV+IWDEWA +DG LGP+YG QWRSWP DG V+DQI+ + LR DP Sbjct: 71 RGDTNVRWLQERGVTIWDEWAREDGGLGPVYGAQWRSWPAPDGAVVDQIAQALHLLRTDP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 +SRR +VSAWNV + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 131 HSRRILVSAWNVGELPKMALAPCHILFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII--NPNIVDLLS 241 LT M+A G + G+F+ T GD HLY NH +QA QL+R P P++ + P++ + Sbjct: 191 LTHMMAQQAGLEAGDFVWTGGDCHLYLNHVDQAREQLARDPFPYPRLELAERPSVFE--- 247 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 YED + Y+ H AI A V+V Sbjct: 248 HEYEDVRILGYQSHPAIKAPVAV 270 >gi|319941408|ref|ZP_08015736.1| thymidylate synthase [Sutterella wadsworthensis 3_1_45B] gi|319805028|gb|EFW01858.1| thymidylate synthase [Sutterella wadsworthensis 3_1_45B] Length = 266 Score = 324 bits (830), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 151/263 (57%), Positives = 197/263 (74%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QY LL+ + + G+ + DRTG GTRS FG QMRF L+ GFPL+TTKK+H +S+++ELLW Sbjct: 4 NQYETLLKDIYERGAHKSDRTGTGTRSLFGCQMRFPLADGFPLVTTKKLHLRSIIYELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL G +N+ YLH H V+IWDEWAD++GELGP+YG QWR+WP DG IDQIS +++ ++ Sbjct: 64 FLSGSTNIKYLHDHKVTIWDEWADENGELGPVYGRQWRAWPTSDGRTIDQISEVLERIKK 123 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR +V+AWN A +DKMALPPCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIASY Sbjct: 124 NPDSRRLLVTAWNPAEVDKMALPPCHCLFQFYVADGRLSCQLYQRSCDMFLGVPFNIASY 183 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A + G+F+ T GD H+Y+NH EQ LQLSR PR P+++I L Sbjct: 184 ALLTHMVAQQCDLEPGDFVWTGGDCHIYDNHLEQTALQLSREPRPYPKLVIKRRPASLFE 243 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + YEDF Y+P I A V+V Sbjct: 244 YEYEDFEFEGYDPWPGIKAPVAV 266 >gi|329921994|ref|ZP_08277801.1| thymidylate synthase [Paenibacillus sp. HGF5] gi|328942454|gb|EGG38717.1| thymidylate synthase [Paenibacillus sp. HGF5] Length = 264 Score = 324 bits (830), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 150/264 (56%), Positives = 192/264 (72%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+ ++ G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL Sbjct: 1 MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLVTTKRIHLKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N+ YL +GV IWDEWAD++G+LGP+YG QWR+W DG IDQI+ ++ S++ Sbjct: 61 WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGRHIDQIAGVIDSIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA ID M LPPCH +FQFYV GKLSC L RS D FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVAEIDNMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GEFI + GDVH+Y+NH EQ QL R P LP+++I + Sbjct: 181 YALLTHMVAQQCDLEPGEFIWSGGDVHIYSNHMEQVRTQLEREPYALPKLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF Y+ H I A V+V Sbjct: 241 DYTFEDFEFEGYQYHPTIKATVAV 264 >gi|332670062|ref|YP_004453070.1| thymidylate synthase [Cellulomonas fimi ATCC 484] gi|332339100|gb|AEE45683.1| thymidylate synthase [Cellulomonas fimi ATCC 484] Length = 281 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 152/261 (58%), Positives = 191/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+Q+RFDLS+GFPL+TTK+VH +SVV ELLWFL Sbjct: 22 YEDLLRLVMATGTPKSDRTGTGTRSVFGHQLRFDLSQGFPLVTTKRVHLRSVVQELLWFL 81 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L GV+IWDEWAD DGELGP+YGVQWRSWP DG +DQI+ +V++LR DP Sbjct: 82 RGESNVRWLREQGVTIWDEWADADGELGPVYGVQWRSWPTPDGGAVDQITQLVENLRRDP 141 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRH+VSAWNVA I MAL PCH FQ YV +G+LS Q+YQRS D+FLG+PFN+ASY+L Sbjct: 142 DSRRHLVSAWNVAAIPDMALAPCHAFFQAYVADGRLSLQVYQRSADLFLGVPFNLASYAL 201 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA + G+ + T GD H+Y+NH +Q QLSR P P + + +L +R Sbjct: 202 LTHMLAQQTDLEVGDLVWTGGDCHVYDNHVDQVREQLSREPYAPPTLRLR-RAPSILEYR 260 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y H I A V+V Sbjct: 261 FEDVEVVDYRHHPTIKAPVAV 281 >gi|262202109|ref|YP_003273317.1| thymidylate synthase [Gordonia bronchialis DSM 43247] gi|262085456|gb|ACY21424.1| thymidylate synthase [Gordonia bronchialis DSM 43247] Length = 270 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 153/261 (58%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL V++ G+ + DRTG GTRS FG+Q+R+DL+ GFPL+TTKKVH KS+++ELLWFL Sbjct: 11 YEDLLALVLETGTPKDDRTGTGTRSLFGHQLRYDLAAGFPLITTKKVHLKSIIYELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV+IWDEWAD +GELGP+YGVQWRSWP G IDQI+ ++ LR DP Sbjct: 71 RGDSNVRWLQERGVTIWDEWADDNGELGPVYGVQWRSWPTPSGEHIDQIAGALRLLRTDP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 131 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G GEF+ T GD H+Y+NH +Q LQLSR P P++ + + + + Sbjct: 191 LTHMMAQQAGLGVGEFVWTGGDCHIYDNHVDQVRLQLSRDPYPYPKLELR-HRDSIFGYE 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y H I A V+V Sbjct: 250 FDDIAVVDYRSHPPIKAPVAV 270 >gi|227501444|ref|ZP_03931493.1| thymidylate synthase [Corynebacterium accolens ATCC 49725] gi|227077469|gb|EEI15432.1| thymidylate synthase [Corynebacterium accolens ATCC 49725] Length = 275 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 152/261 (58%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++ VV ELLWFL Sbjct: 16 YEDLLRRVLESGTAKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHGVVGELLWFL 75 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L + V IW+EWAD++G+LGP+YGVQWRSWP DG+ IDQI + +L+ +P Sbjct: 76 RGDSNVKFLQDNNVRIWNEWADENGDLGPVYGVQWRSWPTPDGSHIDQIQQALDTLKNNP 135 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNV+ +D+MAL PCH LFQ YV N LS Q+YQRS D+FLG+PFNIASY+ Sbjct: 136 DSRRNLVSAWNVSELDQMALMPCHLLFQLYVANDTLSLQVYQRSADMFLGVPFNIASYAA 195 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + G+ I T GD H+YNNH EQ QLSR PR PQ+ +N DL S+ Sbjct: 196 LTHMFAQQAGLKVGDLIWTGGDCHIYNNHIEQVQEQLSREPREYPQLKLN-KAKDLFSYD 254 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + DF ++ Y+PH AI A+VSV Sbjct: 255 FADFEVQGYDPHPAIKAQVSV 275 >gi|257070033|ref|YP_003156288.1| thymidylate synthase [Brachybacterium faecium DSM 4810] gi|256560851|gb|ACU86698.1| thymidylate synthase [Brachybacterium faecium DSM 4810] Length = 267 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 153/261 (58%), Positives = 192/261 (73%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G + DRTG GTRS FG Q+RFDLS+GFPL+TTK+VH +S++ ELLWFL Sbjct: 7 YEDLLREVMETGHAKGDRTGTGTRSLFGKQIRFDLSQGFPLITTKRVHTRSIILELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+NV +L GVSIWDEWAD++G+LGP+YG QWRSWP DG VIDQI+ +V+ +R +P Sbjct: 67 RGDTNVRWLQERGVSIWDEWADENGDLGPVYGAQWRSWPTPDGGVIDQITDVVEQIRTNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWN A I +MAL PCH LFQF V +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRLIVSAWNPADIPQMALAPCHALFQFEVHDGKLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A + G+F+ T GD H+Y+NH EQ QLSR P P++ I +L + Sbjct: 187 LTHMVAQQTDLEVGDFVWTGGDCHIYDNHHEQVQRQLSREPFPSPRLRIARRPESILDYE 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ED + Y+ H I A V+V Sbjct: 247 LEDIEILDYQHHKGIKAPVAV 267 >gi|325124433|gb|ADY83956.1| thyA; thymidylate synthase (Ts) (TSase) [Acinetobacter calcoaceticus PHEA-2] Length = 280 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + VSIWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR I+S WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I DL F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEIKDLFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|326384524|ref|ZP_08206204.1| thymidylate synthase [Gordonia neofelifaecis NRRL B-59395] gi|326196869|gb|EGD54063.1| thymidylate synthase [Gordonia neofelifaecis NRRL B-59395] Length = 268 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 152/261 (58%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG+QMRFDLS+GFP++TTKKVH KS+++ELLWFL Sbjct: 9 YEDLLRLVLETGTPKADRTGTGTRSVFGHQMRFDLSEGFPVITTKKVHLKSIIYELLWFL 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV+IWDEWA +GELGP+YGVQWR+WP G +DQI+ +++LR+DP Sbjct: 69 RGDSNVRWLQDRGVTIWDEWASPEGELGPVYGVQWRNWPTPSGEHVDQIAVALETLRSDP 128 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 129 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVAGGKLSCQLYQRSADLFLGVPFNIASYAL 188 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G + G+F+ T GD H+Y+NH EQ QLSR P + + + + Sbjct: 189 LTHMMAQQAGLEVGDFVWTGGDCHIYDNHVEQVREQLSRDALPYPTLRLR-KADSIFDYD 247 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y H AI A V+V Sbjct: 248 FDDVEVVDYHSHPAIKAPVAV 268 >gi|299771659|ref|YP_003733685.1| thymidylate synthase [Acinetobacter sp. DR1] gi|298701747|gb|ADI92312.1| thymidylate synthase [Acinetobacter sp. DR1] Length = 280 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + VSIWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR I+S WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I DL F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEIKDLFDFKFEDVEIVGYESHPAIKAPVAV 280 >gi|219681791|ref|YP_002468177.1| thymidylate synthase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471493|ref|ZP_05635492.1| thymidylate synthase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254790232|sp|B8D9L8|TYSY_BUCA5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219624634|gb|ACL30789.1| thymidylate synthase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 264 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 146/264 (55%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H S+++ELL Sbjct: 1 MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W +G+ IDQI +++ L+ Sbjct: 61 WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV IDKM LPPCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YS+L M+A + G+F+ T GDVHLYNNH E A Q+ R PRTLP++ I L Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y P+ AI K+S+ Sbjct: 241 QYCFEDFKIIGYHPYPAIKGKISI 264 >gi|311087331|gb|ADP67411.1| thymidylate synthase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 264 Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 145/264 (54%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H S+++ELL Sbjct: 1 MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W +G+ IDQI +++ L+ Sbjct: 61 WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTLEGHEIDQIKNVLIQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV IDKM LPPCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YS+L M+A + G+F+ T GDVHLYNNH E A Q+ R PRTLP++ I L Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y P+ AI ++S+ Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264 >gi|293610254|ref|ZP_06692555.1| thymidylate synthase [Acinetobacter sp. SH024] gi|292827486|gb|EFF85850.1| thymidylate synthase [Acinetobacter sp. SH024] Length = 280 Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + VSIWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQARLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + DL F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEVKDLFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|260556178|ref|ZP_05828397.1| thymidylate synthase [Acinetobacter baumannii ATCC 19606] gi|193076274|gb|ABO10913.2| thymidylate synthase [Acinetobacter baumannii ATCC 17978] gi|260410233|gb|EEX03532.1| thymidylate synthase [Acinetobacter baumannii ATCC 19606] Length = 280 Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLDVGDFVWTGGDTHLYANHFEQAKLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP++ D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|163735032|ref|ZP_02142469.1| thymidylate synthase [Roseobacter litoralis Och 149] gi|161391814|gb|EDQ16146.1| thymidylate synthase [Roseobacter litoralis Och 149] Length = 277 Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 147/277 (53%), Positives = 204/277 (73%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D LR +++FG + DRTG GT S FG QMR+ LS GFPL+TTKK+H +S+ HELL Sbjct: 1 MQQYHDALRTILEFGEESTDRTGTGTTSYFGMQMRYRLSDGFPLVTTKKLHLRSIFHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-------------PDYDGN 107 WFL GD+N+ YL +GV IWDEWAD++G+LGP+YG QWR++ P + G Sbjct: 61 WFLSGDTNIRYLQENGVKIWDEWADENGDLGPVYGHQWRAFSAGAQTGDVKDDEPLHIGR 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQ+++++ ++++ P SRR IVSAWN A + +MALPPCH L+Q V NG++ QLYQRS Sbjct: 121 GVDQVANLIDTIKSSPDSRRLIVSAWNPADVPRMALPPCHALWQVRVLNGRMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASYS+L +MLA V G++ G+F+HTLGD H+Y+NH +Q +LQL+R+P+ L Sbjct: 181 ADMFLGVPFNIASYSMLLVMLAHVTGYEPGDFVHTLGDAHIYSNHMDQVNLQLTRTPKPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ IN ++ + FRYEDF + Y+P AI A V+V Sbjct: 241 PKLRINRDVSSIFDFRYEDFEVIGYDPDPAIRAPVAV 277 >gi|256832262|ref|YP_003160989.1| thymidylate synthase [Jonesia denitrificans DSM 20603] gi|256685793|gb|ACV08686.1| thymidylate synthase [Jonesia denitrificans DSM 20603] Length = 266 Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 154/261 (59%), Positives = 190/261 (72%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL ++ G+ + DRTG GT S FG+QMRFDL +GFPL+TTKKVH KSVV ELLWFL Sbjct: 7 YEDLLALTLQHGTPKNDRTGTGTTSIFGHQMRFDLREGFPLITTKKVHLKSVVGELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L HG+ IW+EWAD GELGP+YGVQWRSWP DG+ IDQ+S +V +LR DP Sbjct: 67 RGESNVQWLQDHGIRIWNEWADARGELGPVYGVQWRSWPTPDGHHIDQLSQVVDTLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + KMAL PCH FQFYV +G LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRMLVSAWNVSELHKMALAPCHAFFQFYVADGTLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A GEFI T GD H+Y+NH Q + QL+R R P++ +N L + Sbjct: 187 LTHMVAQQTDLAVGEFIWTGGDCHIYDNHRSQVNEQLTRDVRPFPRLELN-RADSLFDYC 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + YEPH I A V+V Sbjct: 246 FDDVVVHDYEPHPTIRASVAV 266 >gi|15617039|ref|NP_240252.1| thymidylate synthase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11387178|sp|P57515|TYSY_BUCAI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|25285999|pir||B84981 thymidylate synthase (EC 2.1.1.45) [imported] - Buchnera sp. (strain APS) gi|10039104|dbj|BAB13138.1| thymidylate synthase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 264 Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 146/264 (55%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H S+++ELL Sbjct: 1 MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+SYL+ + +SIW+ WA++ G++GPIYG QWR+W +G+ IDQI +++ L+ Sbjct: 61 WFLKGDTNISYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV IDKM LPPCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YS+L M+A + G+F+ T GDVHLYNNH E A Q+ R PRTLP++ I L Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y P+ AI ++S+ Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264 >gi|237748057|ref|ZP_04578537.1| thymidylate synthetase [Oxalobacter formigenes OXCC13] gi|229379419|gb|EEO29510.1| thymidylate synthetase [Oxalobacter formigenes OXCC13] Length = 277 Score = 322 bits (824), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 148/277 (53%), Positives = 199/277 (71%), Gaps = 18/277 (6%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LL+ ++ G D+ DRTG GTR+ FG MR DL G PLLTTK++H +S++HELLWF Sbjct: 4 QYLNLLQEILDCGIDKGDRTGTGTRAVFGRMMRHDLKNGLPLLTTKRLHIRSIIHELLWF 63 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+G +NV YL+ + V+IWDEWA ++GELGPIYG QWR+W DG +IDQ++ ++ S+R + Sbjct: 64 LQGGTNVQYLNENKVTIWDEWATENGELGPIYGAQWRAWEGSDGRIIDQVAGVIDSIRTN 123 Query: 123 PYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 P SRRHI+SAWNVAL+ KMAL PCH ++QF V G+LSC + QRSGD Sbjct: 124 PDSRRHIISAWNVALLPSEKMSPQENVRAGKMALAPCHVMYQFQVAAGRLSCMMTQRSGD 183 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 +FLGIP+N AS + LT M+A + GE IH++GD+HLY NHF+QA LQLSR PR LP Sbjct: 184 IFLGIPYNTASTAFLTHMIAQQCDLEPGEIIHSIGDLHLYTNHFDQAKLQLSREPRALPT 243 Query: 230 MIIN--PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++ P+I D +R+EDF + Y+PH AI A ++V Sbjct: 244 LKLDKKPSIFD---YRFEDFEVIGYDPHPAIAAPIAV 277 >gi|239814670|ref|YP_002943580.1| thymidylate synthase [Variovorax paradoxus S110] gi|239801247|gb|ACS18314.1| thymidylate synthase [Variovorax paradoxus S110] Length = 289 Score = 322 bits (824), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 154/269 (57%), Positives = 192/269 (71%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH +S++ ELLWF Sbjct: 21 QYEDFMRHVDTHGVHKSDRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLRSIIQELLWF 80 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G SN ++L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS ++++L+ + Sbjct: 81 LTGSSNNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKTN 140 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + KMAL PCH FQFYV + GKLSCQLYQRS D+FLG+P Sbjct: 141 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPPQAPGERGKLSCQLYQRSADIFLGVP 200 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A G+FI T GD H+Y+NH EQ LQLSR+P P + I Sbjct: 201 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVALQLSRTPYPYPTLHIKRK 260 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++YEDF + Y H I A V+V Sbjct: 261 PASIFDYQYEDFEVLDYRHHDPIKAPVAV 289 >gi|184156788|ref|YP_001845127.1| thymidylate synthase [Acinetobacter baumannii ACICU] gi|239500809|ref|ZP_04660119.1| thymidylate synthase [Acinetobacter baumannii AB900] gi|332873201|ref|ZP_08441158.1| thymidylate synthase [Acinetobacter baumannii 6014059] gi|183208382|gb|ACC55780.1| Thymidylate synthase [Acinetobacter baumannii ACICU] gi|322506680|gb|ADX02134.1| thyA [Acinetobacter baumannii 1656-2] gi|323516555|gb|ADX90936.1| thymidylate synthase [Acinetobacter baumannii TCDC-AB0715] gi|332738713|gb|EGJ69583.1| thymidylate synthase [Acinetobacter baumannii 6014059] Length = 280 Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP++ D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|169797290|ref|YP_001715083.1| thymidylate synthase [Acinetobacter baumannii AYE] gi|213155900|ref|YP_002317945.1| thymidylate synthase [Acinetobacter baumannii AB0057] gi|215484727|ref|YP_002326962.1| thymidylate synthase [Acinetobacter baumannii AB307-0294] gi|301346589|ref|ZP_07227330.1| thymidylate synthase [Acinetobacter baumannii AB056] gi|301511036|ref|ZP_07236273.1| thymidylate synthase [Acinetobacter baumannii AB058] gi|301595085|ref|ZP_07240093.1| thymidylate synthase [Acinetobacter baumannii AB059] gi|332851207|ref|ZP_08433280.1| thymidylate synthase [Acinetobacter baumannii 6013150] gi|332866061|ref|ZP_08436789.1| thymidylate synthase [Acinetobacter baumannii 6013113] gi|226713163|sp|B7H0P4|TYSY_ACIB3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713164|sp|B7I4U0|TYSY_ACIB5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|169150217|emb|CAM88113.1| thymidylate synthase (TS) (TSase) [Acinetobacter baumannii AYE] gi|213055060|gb|ACJ39962.1| thymidylate synthase [Acinetobacter baumannii AB0057] gi|213986584|gb|ACJ56883.1| thymidylate synthase [Acinetobacter baumannii AB307-0294] gi|332730087|gb|EGJ61414.1| thymidylate synthase [Acinetobacter baumannii 6013150] gi|332734807|gb|EGJ65900.1| thymidylate synthase [Acinetobacter baumannii 6013113] Length = 280 Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 156/280 (55%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|262280883|ref|ZP_06058666.1| thymidylate synthase [Acinetobacter calcoaceticus RUH2202] gi|262257783|gb|EEY76518.1| thymidylate synthase [Acinetobacter calcoaceticus RUH2202] Length = 280 Score = 321 bits (823), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 157/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + VSIWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR I+S WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYVNHFEQAQLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + DL F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEVKDLFDFKFEDVEIVGYESHPAIKAPVAV 280 >gi|169634445|ref|YP_001708181.1| thymidylate synthase [Acinetobacter baumannii SDF] gi|169153237|emb|CAP02337.1| thymidylate synthase (TS) (TSase) [Acinetobacter baumannii] Length = 280 Score = 321 bits (823), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD+HLY NHFEQA LQL R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDIHLYANHFEQAKLQLMREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP++ D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|261338193|ref|ZP_05966077.1| thymidylate synthase [Bifidobacterium gallicum DSM 20093] gi|270276839|gb|EFA22693.1| thymidylate synthase [Bifidobacterium gallicum DSM 20093] Length = 289 Score = 321 bits (823), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 153/265 (57%), Positives = 195/265 (73%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S FG QMRFDL++GFPLLTTK+V K + +ELLWFL Sbjct: 26 YEDLLRKILMEGNLKSDRTGTGTISLFGQQMRFDLTQGFPLLTTKRVFLKGITYELLWFL 85 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L H V IWDEWAD+ G+LGP+YGVQWRSWP D IDQIS++++ + Sbjct: 86 KGSSNVRWLQEHNVHIWDEWADEHGDLGPVYGVQWRSWPAPTADDPNRTIDQISNVLELI 145 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R +P SRR +VSAWN A +++MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIA Sbjct: 146 RTNPDSRRMVVSAWNPAEVEQMALPPCHALFQFYVANGKLSCQLYQRSCDMFLGVPFNIA 205 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYS+LTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P PQ+ I L Sbjct: 206 SYSMLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEIR-KADSL 264 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + ++DFT+++Y+ H I A ++V Sbjct: 265 FEYDWDDFTIQNYQYHPTIKAPIAV 289 >gi|308048436|ref|YP_003912002.1| thymidylate synthase [Ferrimonas balearica DSM 9799] gi|307630626|gb|ADN74928.1| thymidylate synthase [Ferrimonas balearica DSM 9799] Length = 277 Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 155/277 (55%), Positives = 188/277 (67%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTG GTRS FG+QMRFDL +GFP+LTTKK+HWKS+VHE+L Sbjct: 1 MKAYLDLLNHVMTNGVDRDDRTGTGTRSVFGHQMRFDLGEGFPMLTTKKLHWKSIVHEML 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW+EWA ++GELGP+YGVQWR W DG IDQI+ +++ L+ Sbjct: 61 WFLSGDTNVRYLQENGVRIWNEWATEEGELGPVYGVQWRHWKTPDGQEIDQIAKVIEDLK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWN A + KMAL PCH QFYV NGKLSC L QRS Sbjct: 121 VRPNSRRIIVSAWNPADLPDETCSPAANAEAGKMALAPCHAFIQFYVANGKLSCMLTQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+ FNI SY+LLT M+A G + GEFI + GDVH+Y NHFEQ QL R P L Sbjct: 181 VDCFLGLAFNIPSYALLTHMVAQQTGLEVGEFIWSGGDVHIYKNHFEQVATQLQRQPGAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I + +R+EDF L Y+ I A V++ Sbjct: 241 PKLEILRRPDSIFDYRFEDFALHDYQAQPHIPAPVAI 277 >gi|121610113|ref|YP_997920.1| thymidylate synthase [Verminephrobacter eiseniae EF01-2] gi|121554753|gb|ABM58902.1| thymidylate synthase [Verminephrobacter eiseniae EF01-2] Length = 298 Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 157/268 (58%), Positives = 188/268 (70%), Gaps = 7/268 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+RHV + G + DRTG GT+S FG+QMRFDL GFPL+TTK+VH KS++ ELLWFL Sbjct: 31 YEDLMRHVFRHGVHKSDRTGTGTKSLFGHQMRFDLRGGFPLVTTKRVHLKSIIEELLWFL 90 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 G N +L + GVSIWDEWA DG+LGP+YGVQWRSWP DG IDQI S++ +L+ +P Sbjct: 91 AGSGNNRWLQQRGVSIWDEWARADGDLGPVYGVQWRSWPRPDGGHIDQIGSVIATLKTNP 150 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIPF 176 SRR IVSAWNVA +DKMAL PCH LFQFYV G LSCQLYQRS D+FLG+PF Sbjct: 151 DSRRIIVSAWNVAELDKMALQPCHILFQFYVAPAQTPGGRGTLSCQLYQRSADIFLGLPF 210 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 NIASY+LLT M+A GEFI T GD H+Y+NH Q QL+RSP PQ+ I Sbjct: 211 NIASYALLTHMVAQQCELDVGEFIWTGGDCHIYDNHHAQVQTQLARSPYPYPQLRIRRRP 270 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +RYEDF + Y H AI A V+V Sbjct: 271 DSIFDYRYEDFEVLDYRCHPAIKAPVAV 298 >gi|219682346|ref|YP_002468730.1| thymidylate synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254790233|sp|B8D7X0|TYSY_BUCAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219622079|gb|ACL30235.1| thymidylate synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086743|gb|ADP66824.1| thymidylate synthase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087836|gb|ADP67915.1| thymidylate synthase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 264 Score = 321 bits (822), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 145/264 (54%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H S+++ELL Sbjct: 1 MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W +G+ IDQI +++ L+ Sbjct: 61 WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV IDKM LPPCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YS+L M+A + G+F+ T GDVHLYNNH E A Q+ R PRTLP++ I L Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y P+ AI ++S+ Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264 >gi|259418355|ref|ZP_05742273.1| thymidylate synthase [Silicibacter sp. TrichCH4B] gi|259345750|gb|EEW57594.1| thymidylate synthase [Silicibacter sp. TrichCH4B] Length = 277 Score = 321 bits (822), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 150/277 (54%), Positives = 194/277 (70%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D L+H++ G + DRTG GT S FG Q R+DL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYHDALQHILDHGVETTDRTGTGTLSCFGMQQRYDLADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P Y Sbjct: 61 WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGYQWRKFPRLELAEGTLGDEPLYRAG 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQIS +V+ +R P SRR IV+AWN A + MALPPCH L+Q V GK+ QLYQRS Sbjct: 121 TVDQISDLVKMIRNSPDSRRLIVTAWNPADVPDMALPPCHSLWQVRVLGGKMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LL MLA V G++ G F+HT+GD H+Y+NH EQ LQLSR+P+ L Sbjct: 181 ADMFLGVPFNIASYALLLQMLAHVTGYEIGTFVHTMGDAHIYSNHMEQVKLQLSRTPKQL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+ I N+ L F+YEDF + Y+P I A V+V Sbjct: 241 PQIRIARNVTSLFDFKYEDFEVIGYDPDPTIKAPVAV 277 >gi|300781716|ref|ZP_07091570.1| thymidylate synthase [Corynebacterium genitalium ATCC 33030] gi|300533423|gb|EFK54484.1| thymidylate synthase [Corynebacterium genitalium ATCC 33030] Length = 274 Score = 321 bits (822), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 152/261 (58%), Positives = 189/261 (72%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G + DRTG GT S FG Q+R+DLS FPLLTTKKV++K VV ELLWFL Sbjct: 15 YEDLLREILDTGVAKEDRTGTGTVSVFGKQLRYDLSDSFPLLTTKKVYFKGVVGELLWFL 74 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +GDSNV +L +G+ IW+EWA+ +GELGP+YGVQWRSWP DG IDQI + + L+ DP Sbjct: 75 KGDSNVKWLQDNGIRIWNEWANDNGELGPVYGVQWRSWPTPDGQHIDQIQNALDLLKQDP 134 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNV+ +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFNIASYSL Sbjct: 135 ESRRNVVSAWNVSELDKMALMPCHLLFQLYVADGKLSMQVYQRSADMFLGVPFNIASYSL 194 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GE I T GD H+YN+H EQ QLSR PR PQ+ + + + Sbjct: 195 LTHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSREPRPYPQLEL-AKAESIFDYG 253 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y+PH I AKVSV Sbjct: 254 FDDIAVTGYDPHPTIAAKVSV 274 >gi|262274909|ref|ZP_06052720.1| thymidylate synthase [Grimontia hollisae CIP 101886] gi|262221472|gb|EEY72786.1| thymidylate synthase [Grimontia hollisae CIP 101886] Length = 279 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 148/279 (53%), Positives = 192/279 (68%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G+DR DRTGVGTRS FG QMRFDLS+GFPLLTTKK++ ++++HELL Sbjct: 1 MKQYLDLMQDILDNGTDRGDRTGVGTRSVFGRQMRFDLSEGFPLLTTKKLYTRAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL + V+IWDEWA + G+LGP+YG QWRSW DG+ +DQI+ +++ ++ Sbjct: 61 WFLNGDTNVKYLQDNKVTIWDEWATETGDLGPVYGAQWRSWACPDGSTVDQIAELIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRRHI++AWN A + KMAL PCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 TKPNSRRHIITAWNPADLPDESISPQANAEQGKMALAPCHCLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225 D FLG+PFNIASY+L T M+A GEF+HT GDVHLY+NH + QL R P Sbjct: 181 ADYFLGVPFNIASYALFTHMIAQQCDLDVGEFVHTFGDVHLYHNHLTDDIVYEQLKREPG 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++ EDF + YE I A +++ Sbjct: 241 KRPTLKIKRKPASIFDYKLEDFEIEGYEAQPTIKAPIAI 279 >gi|229196462|ref|ZP_04323208.1| Thymidylate synthase [Bacillus cereus m1293] gi|228587032|gb|EEK45104.1| Thymidylate synthase [Bacillus cereus m1293] Length = 318 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 152/313 (48%), Positives = 199/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESEEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++I+NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLILNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|306835604|ref|ZP_07468615.1| thymidylate synthase [Corynebacterium accolens ATCC 49726] gi|304568537|gb|EFM44091.1| thymidylate synthase [Corynebacterium accolens ATCC 49726] Length = 275 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 150/261 (57%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV+++ V+ ELLWFL Sbjct: 16 YEDLLRRVLEEGTAKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFRGVIGELLWFL 75 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L + V IW+EWAD++G+LGP+YGVQWRSWP DG+ IDQI + +L+ +P Sbjct: 76 RGDSNVKFLQDNNVHIWNEWADENGDLGPVYGVQWRSWPTPDGSHIDQIQQALDTLKNNP 135 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNV+ +D+MAL PCH LFQ YV N LS Q+YQRS D+FLG+PFNIASY+ Sbjct: 136 DSRRNLVSAWNVSELDQMALMPCHLLFQLYVANDTLSLQVYQRSADMFLGVPFNIASYAA 195 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + G+ I T GD H+YNNH EQ QL R PR PQ+ +N DL S+ Sbjct: 196 LTHMFAQQAGLKVGDLIWTGGDCHIYNNHVEQVQEQLFREPREYPQLKLN-KAKDLFSYD 254 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + DF ++ Y+PH AI A+VSV Sbjct: 255 FADFEVQGYDPHPAIKAQVSV 275 >gi|163745997|ref|ZP_02153356.1| Thymidylate synthase [Oceanibulbus indolifex HEL-45] gi|161380742|gb|EDQ05152.1| Thymidylate synthase [Oceanibulbus indolifex HEL-45] Length = 277 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 152/277 (54%), Positives = 198/277 (71%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D LR V+ G DRTG GT S FG Q R+ ++ GFPL+TTKK+H KS+VHELL Sbjct: 1 MKQYHDALREVLDQGVTSTDRTGTGTISHFGMQQRYRMADGFPLVTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP-------DYDGNV----- 108 WFL GD+N++YL ++GVSIW+EWAD+DG+LGP+YG QWR +P DG V Sbjct: 61 WFLAGDTNIAYLRQNGVSIWNEWADEDGDLGPVYGHQWRRFPMVGEPMPQPDGTVLHRAG 120 Query: 109 -IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQI+ +V ++RA P SRR IVSAWN +D+MALPPCH L+Q + GKL QLYQRS Sbjct: 121 QVDQIAKLVDAIRATPDSRRLIVSAWNPGEVDQMALPPCHTLWQVRIAGGKLHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LL MLA V G+ G+F+H++GD H+Y+NH EQ QL+R+P+ L Sbjct: 181 ADMFLGVPFNIASYALLLEMLAHVTGYAPGDFVHSMGDAHIYSNHVEQVQTQLARTPKAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ IN + + FRYEDFT Y+P+ AI A V+V Sbjct: 241 PKLRINRKVSSIFDFRYEDFTFDGYDPNPAIKAPVAV 277 >gi|260220887|emb|CBA28903.1| Thymidylate synthase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 296 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 153/270 (56%), Positives = 195/270 (72%), Gaps = 8/270 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH +S++ ELLWF Sbjct: 27 QYEDFMRHVHTTGVFKSDRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLRSIIQELLWF 86 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 L G SN ++L GV+IWDEWA+ + G+LGP+YGVQWRSWP DG IDQI+ ++++L++ Sbjct: 87 LTGSSNNNWLKERGVTIWDEWANPETGDLGPVYGVQWRSWPTPDGGHIDQIADVIKTLKS 146 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGI 174 +P SRR IVSAWNVA + KMAL PCH FQFYV G+LSCQLYQRS D+FLG+ Sbjct: 147 NPDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPATEPGGKGRLSCQLYQRSADIFLGV 206 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT M+A G+FI T GD H+Y+NH EQ +LQLSR+P P + I Sbjct: 207 PFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHTEQVELQLSRAPMAYPTLNIKR 266 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +++EDF + YE H AI A V+V Sbjct: 267 KPESIFDYQFEDFEVLGYECHPAIKAPVAV 296 >gi|288941276|ref|YP_003443516.1| thymidylate synthase [Allochromatium vinosum DSM 180] gi|288896648|gb|ADC62484.1| thymidylate synthase [Allochromatium vinosum DSM 180] Length = 279 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 153/279 (54%), Positives = 195/279 (69%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR V+ G D+ DRTGVGTR+ FG Q+RFDL+ GFPLLTTK+VH+KSVV ELL Sbjct: 1 MQVYLDLLRDVVANGQDQADRTGVGTRAVFGRQVRFDLAAGFPLLTTKRVHFKSVVGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G ++ +L HG+ IWDEWA + LGPIYG QWR+WP DG IDQ++ +V ++R Sbjct: 61 WFLSGSTDNGWLRAHGIRIWDEWATEHDALGPIYGAQWRAWPAPDGRAIDQLAELVATIR 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P+SRR +VSAWN A + +MAL PCHCLFQF+V NG+LSCQLYQRS Sbjct: 121 TRPHSRRLVVSAWNPADLPDETLSPQDNVRAGRMALAPCHCLFQFHVANGRLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF--EQADLQLSRSPR 225 D+FLG+PFNIASY+LLT ++A + GEFIHT GD+HLY NH E QL R+PR Sbjct: 181 ADLFLGVPFNIASYALLTHLIAQQCDLEPGEFIHTFGDLHLYRNHLTSEIVHAQLGRAPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP++++ L + +ED L+ Y+PH AI A ++V Sbjct: 241 PLPRLVLKRRPETLFDYGFEDIELQGYDPHPAIRAPIAV 279 >gi|229190322|ref|ZP_04317323.1| Thymidylate synthase [Bacillus cereus ATCC 10876] gi|228593106|gb|EEK50924.1| Thymidylate synthase [Bacillus cereus ATCC 10876] Length = 318 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 152/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWRSW G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRSWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|148244715|ref|YP_001219409.1| thymidylate synthase [Candidatus Vesicomyosocius okutanii HA] gi|166231742|sp|A5CWK3|TYSY_VESOH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|146326542|dbj|BAF61685.1| thymidylate synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 264 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 148/264 (56%), Positives = 190/264 (71%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L+ V G + DRT GT S FGYQMRFDLSKGFPL+TTK VH SVV+ELL Sbjct: 1 MKQYLDFLKLVKNIGVYKTDRTNTGTTSMFGYQMRFDLSKGFPLVTTKHVHLPSVVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IW+EWAD++G+LGP+YG QWR W + IDQIS +V+ ++ Sbjct: 61 WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGTQWRHWKNIKDKSIDQISKVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV ++ MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NTPNSRRIIVSAWNVGELENMALPPCHVFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A + G+FI + GD H+Y+NH++Q ++QLSR+P+ L + I ++ Sbjct: 181 YSLLTHMMAQQCDLEVGDFIWSGGDCHIYSNHYKQVEIQLSRTPKALATLKIKRKPENIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF +Y A I A V++ Sbjct: 241 DYSFEDFEFVNYIFDAPIKAPVAI 264 >gi|91787702|ref|YP_548654.1| thymidylate synthase [Polaromonas sp. JS666] gi|123165061|sp|Q12CI6|TYSY_POLSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91696927|gb|ABE43756.1| thymidylate synthase [Polaromonas sp. JS666] Length = 284 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 155/269 (57%), Positives = 192/269 (71%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH KS+V ELLWF Sbjct: 16 QYEDFMRHVDAHGVFKADRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLKSIVQELLWF 75 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G S+ ++L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS ++++L+ + Sbjct: 76 LTGSSDNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKTN 135 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + KMAL PCH FQFYV GKLSCQLYQRS D+FLG+P Sbjct: 136 PDSRRIIVSAWNVADLSKMALMPCHAFFQFYVAPATEAGGKGKLSCQLYQRSADIFLGVP 195 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNI SY+LLT M+A G+FI T GD H+Y+NH EQ LQLSR+P P + I Sbjct: 196 FNIGSYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVALQLSRAPFPYPTLHIKRK 255 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++++DF Y+ HAAI A V+V Sbjct: 256 PESIFDYQFDDFEFLDYQHHAAIKAPVAV 284 >gi|311086170|gb|ADP66252.1| thymidylate synthase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 264 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 145/264 (54%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H S+++ELL Sbjct: 1 MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N +YL+ + +SIW+ WA++ G++GPIYG QWR+W +G+ IDQI +++ L+ Sbjct: 61 WFLKGDTNTAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV IDKM LPPCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YS+L M+A + G+F+ T GDVHLYNNH E A Q+ R PRTLP++ I L Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y P+ AI ++S+ Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264 >gi|254464749|ref|ZP_05078160.1| thymidylate synthase [Rhodobacterales bacterium Y4I] gi|206685657|gb|EDZ46139.1| thymidylate synthase [Rhodobacterales bacterium Y4I] Length = 277 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 150/277 (54%), Positives = 194/277 (70%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD LRH++ G DRTG GT S FG Q R+ L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYLDQLRHILDNGVPSDDRTGTGTLSCFGMQARYSLADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P Y Sbjct: 61 WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRRFPKLELAEGTTGDEPLYRAG 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQI+ +V+ +R P SRR IVSAWN + MALPPCH L+Q V GK+ QLYQRS Sbjct: 121 SVDQIADLVEMIRKSPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRVAGGKMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LL MLA V G++ G+F+HT+GD H+Y+NH EQ LQLSRSP+ L Sbjct: 181 ADMFLGVPFNIASYALLLAMLAHVTGYEAGDFVHTMGDAHIYSNHVEQVRLQLSRSPKPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+ I + + F+YEDF + +Y+P AI A V+V Sbjct: 241 PQLRIKRQVSSIFDFKYEDFEILNYDPDPAIKAPVAV 277 >gi|110679164|ref|YP_682171.1| thymidylate synthase [Roseobacter denitrificans OCh 114] gi|123172620|sp|Q168V8|TYSY_ROSDO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|109455280|gb|ABG31485.1| thymidylate synthase [Roseobacter denitrificans OCh 114] Length = 277 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 149/277 (53%), Positives = 201/277 (72%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D LR +++ G + DRTG GT S FG QMR+ LS GFPL+TTKK+H +S+ HELL Sbjct: 1 MQQYHDALRTILECGEESTDRTGTGTISYFGMQMRYPLSDGFPLVTTKKLHLRSIFHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-------------PDYDGN 107 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR++ P Y G Sbjct: 61 WFLSGDTNIRYLQDNGVSIWDEWADENGDLGPVYGHQWRAFSALSPTEEVKDGEPLYLGR 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQ+++++ +++ P SRR IVSAWN A + +MALPPCH L+Q V NG++ QLYQRS Sbjct: 121 GVDQVTNLIDMIKSSPDSRRMIVSAWNPADVPRMALPPCHALWQVRVLNGRMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASYSLL +MLA V G++ G+F+HTLGD H+Y+NH +Q +LQL+R+P+ L Sbjct: 181 ADMFLGVPFNIASYSLLLVMLAHVTGYEPGDFVHTLGDAHIYSNHMDQVNLQLTRTPKPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + IN + + FRYEDF + Y+P AI A V+V Sbjct: 241 PTLRINRQVSSIFDFRYEDFEVIGYDPDPAIRAPVAV 277 >gi|229167077|ref|ZP_04294821.1| Thymidylate synthase [Bacillus cereus AH621] gi|228616430|gb|EEK73511.1| Thymidylate synthase [Bacillus cereus AH621] Length = 318 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL +H +IW+EWA K Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKQYDEQME 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR+ P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRSFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229172934|ref|ZP_04300487.1| Thymidylate synthase [Bacillus cereus MM3] gi|228610557|gb|EEK67826.1| Thymidylate synthase [Bacillus cereus MM3] Length = 318 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 199/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKNWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDNDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A+ Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIANE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQIEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|47570165|ref|ZP_00240821.1| thymidylate synthase [Bacillus cereus G9241] gi|47553184|gb|EAL11579.1| thymidylate synthase [Bacillus cereus G9241] Length = 318 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRQFPELTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|30020325|ref|NP_831956.1| thymidylate synthase [Bacillus cereus ATCC 14579] gi|206972712|ref|ZP_03233650.1| thymidylate synthase [Bacillus cereus AH1134] gi|218231958|ref|YP_002366936.1| thymidylate synthase [Bacillus cereus B4264] gi|228952578|ref|ZP_04114654.1| Thymidylate synthase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228958506|ref|ZP_04120226.1| Thymidylate synthase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229043979|ref|ZP_04191671.1| Thymidylate synthase [Bacillus cereus AH676] gi|229069766|ref|ZP_04203051.1| Thymidylate synthase [Bacillus cereus F65185] gi|229091229|ref|ZP_04222449.1| Thymidylate synthase [Bacillus cereus Rock3-42] gi|229109679|ref|ZP_04239265.1| Thymidylate synthase [Bacillus cereus Rock1-15] gi|229127635|ref|ZP_04256624.1| Thymidylate synthase [Bacillus cereus BDRD-Cer4] gi|229144831|ref|ZP_04273228.1| Thymidylate synthase [Bacillus cereus BDRD-ST24] gi|229178605|ref|ZP_04305969.1| Thymidylate synthase [Bacillus cereus 172560W] gi|296502804|ref|YP_003664504.1| thymidylate synthase [Bacillus thuringiensis BMB171] gi|33301701|sp|Q81E05|TYSY_BACCR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|29895876|gb|AAP09157.1| Thymidylate synthase [Bacillus cereus ATCC 14579] gi|206732367|gb|EDZ49551.1| thymidylate synthase [Bacillus cereus AH1134] gi|218159915|gb|ACK59907.1| thymidylate synthase [Bacillus cereus B4264] gi|228604763|gb|EEK62220.1| Thymidylate synthase [Bacillus cereus 172560W] gi|228638553|gb|EEK94986.1| Thymidylate synthase [Bacillus cereus BDRD-ST24] gi|228655712|gb|EEL11561.1| Thymidylate synthase [Bacillus cereus BDRD-Cer4] gi|228673720|gb|EEL28978.1| Thymidylate synthase [Bacillus cereus Rock1-15] gi|228692127|gb|EEL45866.1| Thymidylate synthase [Bacillus cereus Rock3-42] gi|228713387|gb|EEL65277.1| Thymidylate synthase [Bacillus cereus F65185] gi|228725361|gb|EEL76626.1| Thymidylate synthase [Bacillus cereus AH676] gi|228801133|gb|EEM48030.1| Thymidylate synthase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228807044|gb|EEM53587.1| Thymidylate synthase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|296323856|gb|ADH06784.1| thymidylate synthase [Bacillus thuringiensis BMB171] Length = 318 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|228985327|ref|ZP_04145488.1| Thymidylate synthase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229155822|ref|ZP_04283925.1| Thymidylate synthase [Bacillus cereus ATCC 4342] gi|228627666|gb|EEK84390.1| Thymidylate synthase [Bacillus cereus ATCC 4342] gi|228774423|gb|EEM22828.1| Thymidylate synthase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 318 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPELTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|145588568|ref|YP_001155165.1| thymidylate synthase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189036940|sp|A4SVT7|TYSY_POLSQ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145046974|gb|ABP33601.1| thymidylate synthase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 264 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/264 (57%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L++ V+ G + DRTG GT S FG+QMRF+L+ GFP++TTKK+H KS+V+ELL Sbjct: 1 MRQYHNLMKEVLAKGVQKSDRTGTGTISVFGHQMRFNLADGFPMVTTKKLHMKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G ++ ++L GVSIW+EWA DG+LGPIYG QWRSWP +G IDQIS +V++++ Sbjct: 61 WFLKGSTDNNWLKERGVSIWNEWAAPDGDLGPIYGYQWRSWPAPNGQHIDQISEVVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRIIVSAWNVADIPRMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+FI T GD HLY+NH EQ DLQLSR LP++ I L Sbjct: 181 YALLTHMVAQQCNLEVGDFIWTGGDCHLYSNHLEQVDLQLSRDFLPLPKLNILRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + YE H I A V++ Sbjct: 241 DYEFEDFEIVGYESHPHIKAPVAI 264 >gi|229096735|ref|ZP_04227706.1| Thymidylate synthase [Bacillus cereus Rock3-29] gi|229115714|ref|ZP_04245119.1| Thymidylate synthase [Bacillus cereus Rock1-3] gi|228667856|gb|EEL23293.1| Thymidylate synthase [Bacillus cereus Rock1-3] gi|228686941|gb|EEL40848.1| Thymidylate synthase [Bacillus cereus Rock3-29] Length = 318 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQMD 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|293364092|ref|ZP_06610828.1| thymidylate synthase [Mycoplasma alligatoris A21JP2] gi|292552582|gb|EFF41356.1| thymidylate synthase [Mycoplasma alligatoris A21JP2] Length = 289 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 155/294 (52%), Positives = 199/294 (67%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++ V+ G RRDRTGVGT FG Q R+DL KGFPLLTTKK+ WK++V ELL Sbjct: 1 MKQYLKLIKTVLNEGMVRRDRTGVGTIGIFGTQTRYDLRKGFPLLTTKKMAWKAIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WFL+GD+N+ YL + V+IW+EW A K G+LG Sbjct: 61 WFLKGDTNIKYLVDNNVNIWNEWPYEKFKKSSDFKNETLEQFIQKIKTDDDFAQKHGDLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D N +DQI+ I+Q L+ P+SRR IV+AWN AL+D+MALPPCH LFQ Sbjct: 121 PVYGKQWR-----DFNGVDQITKIIQELKEKPFSRRMIVNAWNPALVDQMALPPCHALFQ 175 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FYV N +LS QLYQRSGD+FLG+PFNIASYSLL M+A V G + GEF+HT+GD H+Y+ Sbjct: 176 FYVSSNDELSLQLYQRSGDLFLGVPFNIASYSLLLHMVAQVTGLRVGEFVHTIGDAHIYS 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH+EQ + QL+R P LP + +N I ++ F+YED + Y+ HA I A+V+V Sbjct: 236 NHYEQVNEQLARRPFKLPTLSLNKEIKNIFDFKYEDIKIEDYKSHAKIKAEVAV 289 >gi|42781330|ref|NP_978577.1| thymidylate synthase [Bacillus cereus ATCC 10987] gi|206978240|ref|ZP_03239119.1| thymidylate synthase [Bacillus cereus H3081.97] gi|217959749|ref|YP_002338301.1| thymidylate synthase [Bacillus cereus AH187] gi|228907968|ref|ZP_04071819.1| Thymidylate synthase [Bacillus thuringiensis IBL 200] gi|228939370|ref|ZP_04101961.1| Thymidylate synthase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972248|ref|ZP_04132862.1| Thymidylate synthase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978863|ref|ZP_04139231.1| Thymidylate synthase [Bacillus thuringiensis Bt407] gi|62901335|sp|Q738X7|TYSY_BACC1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|42737252|gb|AAS41185.1| thymidylate synthase [Bacillus cereus ATCC 10987] gi|206743541|gb|EDZ54969.1| thymidylate synthase [Bacillus cereus H3081.97] gi|217064386|gb|ACJ78636.1| thymidylate synthase [Bacillus cereus AH187] gi|228780885|gb|EEM29095.1| Thymidylate synthase [Bacillus thuringiensis Bt407] gi|228787498|gb|EEM35463.1| Thymidylate synthase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820330|gb|EEM66364.1| Thymidylate synthase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228851727|gb|EEM96530.1| Thymidylate synthase [Bacillus thuringiensis IBL 200] gi|326939942|gb|AEA15838.1| thymidylate synthase [Bacillus thuringiensis serovar chinensis CT-43] Length = 318 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|30262250|ref|NP_844627.1| thymidylate synthase [Bacillus anthracis str. Ames] gi|47527532|ref|YP_018881.1| thymidylate synthase [Bacillus anthracis str. 'Ames Ancestor'] gi|49185093|ref|YP_028345.1| thymidylate synthase [Bacillus anthracis str. Sterne] gi|49477562|ref|YP_036349.1| thymidylate synthase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65319542|ref|ZP_00392501.1| COG0207: Thymidylate synthase [Bacillus anthracis str. A2012] gi|118477668|ref|YP_894819.1| thymidylate synthase [Bacillus thuringiensis str. Al Hakam] gi|165872246|ref|ZP_02216884.1| thymidylate synthase [Bacillus anthracis str. A0488] gi|167633020|ref|ZP_02391346.1| thymidylate synthase [Bacillus anthracis str. A0442] gi|167641064|ref|ZP_02399320.1| thymidylate synthase [Bacillus anthracis str. A0193] gi|170686448|ref|ZP_02877669.1| thymidylate synthase [Bacillus anthracis str. A0465] gi|170708449|ref|ZP_02898892.1| thymidylate synthase [Bacillus anthracis str. A0389] gi|177650834|ref|ZP_02933731.1| thymidylate synthase [Bacillus anthracis str. A0174] gi|190567905|ref|ZP_03020816.1| thymidylate synthase [Bacillus anthracis Tsiankovskii-I] gi|196033812|ref|ZP_03101223.1| thymidylate synthase [Bacillus cereus W] gi|196042313|ref|ZP_03109590.1| thymidylate synthase [Bacillus cereus NVH0597-99] gi|196046931|ref|ZP_03114152.1| thymidylate synthase [Bacillus cereus 03BB108] gi|218903379|ref|YP_002451213.1| thymidylate synthase [Bacillus cereus AH820] gi|225864217|ref|YP_002749595.1| thymidylate synthase [Bacillus cereus 03BB102] gi|227814947|ref|YP_002814956.1| thymidylate synthase [Bacillus anthracis str. CDC 684] gi|228914838|ref|ZP_04078446.1| Thymidylate synthase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228927305|ref|ZP_04090366.1| Thymidylate synthase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228945857|ref|ZP_04108201.1| Thymidylate synthase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229121792|ref|ZP_04251013.1| Thymidylate synthase [Bacillus cereus 95/8201] gi|229184465|ref|ZP_04311670.1| Thymidylate synthase [Bacillus cereus BGSC 6E1] gi|229604628|ref|YP_002866591.1| thymidylate synthase [Bacillus anthracis str. A0248] gi|254684819|ref|ZP_05148679.1| thymidylate synthase [Bacillus anthracis str. CNEVA-9066] gi|254722227|ref|ZP_05184015.1| thymidylate synthase [Bacillus anthracis str. A1055] gi|254737265|ref|ZP_05194969.1| thymidylate synthase [Bacillus anthracis str. Western North America USA6153] gi|254743548|ref|ZP_05201233.1| thymidylate synthase [Bacillus anthracis str. Kruger B] gi|254751581|ref|ZP_05203618.1| thymidylate synthase [Bacillus anthracis str. Vollum] gi|254759096|ref|ZP_05211123.1| thymidylate synthase [Bacillus anthracis str. Australia 94] gi|301053768|ref|YP_003791979.1| thymidylate synthase [Bacillus anthracis CI] gi|33301703|sp|Q81R23|TYSY_BACAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901310|sp|Q6HJC7|TYSY_BACHK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231689|sp|A0RDL9|TYSY_BACAH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|30256881|gb|AAP26113.1| thymidylate synthase [Bacillus anthracis str. Ames] gi|47502680|gb|AAT31356.1| thymidylate synthase [Bacillus anthracis str. 'Ames Ancestor'] gi|49179020|gb|AAT54396.1| thymidylate synthase [Bacillus anthracis str. Sterne] gi|49329118|gb|AAT59764.1| thymidylate synthase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118416893|gb|ABK85312.1| thymidylate synthase [Bacillus thuringiensis str. Al Hakam] gi|164712039|gb|EDR17578.1| thymidylate synthase [Bacillus anthracis str. A0488] gi|167510962|gb|EDR86352.1| thymidylate synthase [Bacillus anthracis str. A0193] gi|167531832|gb|EDR94497.1| thymidylate synthase [Bacillus anthracis str. A0442] gi|170126688|gb|EDS95572.1| thymidylate synthase [Bacillus anthracis str. A0389] gi|170669524|gb|EDT20266.1| thymidylate synthase [Bacillus anthracis str. A0465] gi|172083295|gb|EDT68356.1| thymidylate synthase [Bacillus anthracis str. A0174] gi|190560960|gb|EDV14934.1| thymidylate synthase [Bacillus anthracis Tsiankovskii-I] gi|195993492|gb|EDX57449.1| thymidylate synthase [Bacillus cereus W] gi|196022306|gb|EDX60992.1| thymidylate synthase [Bacillus cereus 03BB108] gi|196026858|gb|EDX65488.1| thymidylate synthase [Bacillus cereus NVH0597-99] gi|218539044|gb|ACK91442.1| thymidylate synthase [Bacillus cereus AH820] gi|225789076|gb|ACO29293.1| thymidylate synthase [Bacillus cereus 03BB102] gi|227004156|gb|ACP13899.1| thymidylate synthase [Bacillus anthracis str. CDC 684] gi|228599009|gb|EEK56624.1| Thymidylate synthase [Bacillus cereus BGSC 6E1] gi|228661708|gb|EEL17327.1| Thymidylate synthase [Bacillus cereus 95/8201] gi|228813839|gb|EEM60116.1| Thymidylate synthase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228832381|gb|EEM77957.1| Thymidylate synthase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228844809|gb|EEM89852.1| Thymidylate synthase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229269036|gb|ACQ50673.1| thymidylate synthase [Bacillus anthracis str. A0248] gi|300375937|gb|ADK04841.1| thymidylate synthase [Bacillus cereus biovar anthracis str. CI] Length = 318 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMIDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|52143217|ref|YP_083612.1| thymidylate synthase [Bacillus cereus E33L] gi|62901260|sp|Q63BV5|TYSY_BACCZ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|51976686|gb|AAU18236.1| thymidylate synthase [Bacillus cereus E33L] Length = 318 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDKQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229029956|ref|ZP_04186024.1| Thymidylate synthase [Bacillus cereus AH1271] gi|228731383|gb|EEL82297.1| Thymidylate synthase [Bacillus cereus AH1271] Length = 318 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 199/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKIPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A+ Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIANE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229161214|ref|ZP_04289201.1| Thymidylate synthase [Bacillus cereus R309803] gi|228622310|gb|EEK79149.1| Thymidylate synthase [Bacillus cereus R309803] Length = 318 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|300118030|ref|ZP_07055778.1| thymidylate synthase [Bacillus cereus SJ1] gi|298724341|gb|EFI65035.1| thymidylate synthase [Bacillus cereus SJ1] Length = 318 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWIESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229102840|ref|ZP_04233535.1| Thymidylate synthase [Bacillus cereus Rock3-28] gi|228680579|gb|EEL34761.1| Thymidylate synthase [Bacillus cereus Rock3-28] Length = 318 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVRYDEQMD 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229059909|ref|ZP_04197284.1| Thymidylate synthase [Bacillus cereus AH603] gi|228719454|gb|EEL71057.1| Thymidylate synthase [Bacillus cereus AH603] Length = 318 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL +H +IW+EWA K Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKRYDEQME 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229074920|ref|ZP_04207929.1| Thymidylate synthase [Bacillus cereus Rock4-18] gi|228708257|gb|EEL60421.1| Thymidylate synthase [Bacillus cereus Rock4-18] Length = 318 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWIESDEYTGPDMTDFGLRSQQDEEFKVQYDEQMD 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEIEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|260549117|ref|ZP_05823338.1| thymidylate synthase [Acinetobacter sp. RUH2624] gi|260407845|gb|EEX01317.1| thymidylate synthase [Acinetobacter sp. RUH2624] Length = 280 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 155/280 (55%), Positives = 196/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|229017549|ref|ZP_04174449.1| Thymidylate synthase [Bacillus cereus AH1273] gi|229023767|ref|ZP_04180256.1| Thymidylate synthase [Bacillus cereus AH1272] gi|228737564|gb|EEL88071.1| Thymidylate synthase [Bacillus cereus AH1272] gi|228743774|gb|EEL93876.1| Thymidylate synthase [Bacillus cereus AH1273] Length = 318 Score = 318 bits (815), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL +H +IW+EWA K Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKSVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|163940030|ref|YP_001644914.1| thymidylate synthase [Bacillus weihenstephanensis KBAB4] gi|163862227|gb|ABY43286.1| Thymidylate synthase [Bacillus weihenstephanensis KBAB4] Length = 318 Score = 318 bits (815), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL +H +IW+EWA K Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|307826303|ref|ZP_07656510.1| thymidylate synthase [Methylobacter tundripaludum SV96] gi|307732659|gb|EFO03529.1| thymidylate synthase [Methylobacter tundripaludum SV96] Length = 277 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 152/277 (54%), Positives = 199/277 (71%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL ++I+ GS + DRTG GT S FG+QMRF L++GFPL+TTKK+H KS+++EL+ Sbjct: 1 MKPYLQLLDNIIQQGSPKGDRTGSGTLSIFGHQMRFPLAEGFPLVTTKKIHLKSIIYELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+S+LH++ V+IW+EWAD++GELGP+YG QWRSWP DG IDQI +++ L+ Sbjct: 61 WFLKGETNLSFLHQYNVNIWNEWADQNGELGPVYGHQWRSWPTPDGRHIDQIQQVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVA-------------LIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWNVA + KMAL PCH FQFYV +GKLSCQLYQRS Sbjct: 121 NTPNSRRIIVSAWNVADLPDESISPQQNVALGKMALAPCHAFFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASY+LLT M+A + G+F+ T GDVHLY NH +QA+LQL+R P L Sbjct: 181 CDTFLGLPFNIASYALLTHMVAQQCDLEVGDFVWTGGDVHLYLNHQQQANLQLTRKPYAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF + Y+ H I A +SV Sbjct: 241 PTLRIKRRPESIFDYQYEDFEVIDYQAHEHIKAPISV 277 >gi|326569151|gb|EGE19213.1| thymidylate synthase [Moraxella catarrhalis BC1] Length = 280 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 153/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ Y Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPSSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQITDYQAHPAIKAPVAV 280 >gi|222095834|ref|YP_002529891.1| thymidylate synthase [Bacillus cereus Q1] gi|221239892|gb|ACM12602.1| thymidylate synthase [Bacillus cereus Q1] Length = 318 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP + + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPGVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|326563217|gb|EGE13485.1| thymidylate synthase [Moraxella catarrhalis 12P80B1] Length = 280 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 153/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ Y Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQIADYQAHPAIKAPVAV 280 >gi|326563467|gb|EGE13730.1| thymidylate synthase [Moraxella catarrhalis 103P14B1] gi|326573777|gb|EGE23734.1| thymidylate synthase [Moraxella catarrhalis 101P30B1] Length = 280 Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 153/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ Y Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQITDYQAHPAIKAPVAV 280 >gi|324326272|gb|ADY21532.1| thymidylate synthase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 318 Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKIQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTVGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|326571344|gb|EGE21361.1| thymidylate synthase [Moraxella catarrhalis BC8] Length = 280 Score = 317 bits (813), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 153/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ Y Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPSSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFDFGFDDIQIADYQAHPAIKAPVAV 280 >gi|171463169|ref|YP_001797282.1| Thymidylate synthase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192707|gb|ACB43668.1| Thymidylate synthase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 264 Score = 317 bits (813), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 149/264 (56%), Positives = 192/264 (72%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ V+ G + DRTG GT S FG+QMRF+L GFP++TTKK+H KS+++ELL Sbjct: 1 MRQYHDLMKEVLTKGVQKSDRTGTGTVSVFGHQMRFNLLDGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N ++L GVSIW+EWA DG+LGPIYG QWRSWP +G IDQIS +V++++ Sbjct: 61 WFLKGSTNNNWLKERGVSIWNEWAAPDGDLGPIYGYQWRSWPTPNGQHIDQISEVVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFN AS Sbjct: 121 KNPDSRRIIVSAWNVADIPRMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNTAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT ++A + G+FI T GD HLY+NH EQ DLQLSR LP++ I + Sbjct: 181 YALLTHIMAQQCNLEVGDFIWTGGDCHLYSNHLEQVDLQLSRDFFPLPKLNILRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + YE H I A V++ Sbjct: 241 EYEFEDFEITGYESHPHIKAPVAI 264 >gi|255264088|ref|ZP_05343430.1| thymidylate synthase [Thalassiobium sp. R2A62] gi|255106423|gb|EET49097.1| thymidylate synthase [Thalassiobium sp. R2A62] Length = 268 Score = 317 bits (813), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 147/268 (54%), Positives = 199/268 (74%), Gaps = 4/268 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D L +++ G DRTG GT S FG Q R+ ++ GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYHDALATILETGIRSSDRTGTGTISCFGMQQRYAMADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD--GNV--IDQISSIV 116 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P D G + +DQI+ +V Sbjct: 61 WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGRQWRQFPRIDPQGGIASVDQITDLV 120 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 ++RA P SRR IVSAWN + MALPPCH L+Q + +GKL QLYQRS D+FLG+PF Sbjct: 121 DAIRATPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRILDGKLHLQLYQRSADMFLGVPF 180 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 NIASY+LL +MLA V G++ G+F+HTLGD H+Y+NH EQ +LQLSR+P+TLP + + ++ Sbjct: 181 NIASYALLQLMLAHVTGYEVGDFVHTLGDAHIYSNHMEQVELQLSRTPKTLPIIRLTRDV 240 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + F++EDF + Y+PH AI A V+V Sbjct: 241 GSIFDFKFEDFEVVGYDPHPAIRAPVAV 268 >gi|171057945|ref|YP_001790294.1| thymidylate synthase [Leptothrix cholodnii SP-6] gi|170775390|gb|ACB33529.1| Thymidylate synthase [Leptothrix cholodnii SP-6] Length = 282 Score = 317 bits (813), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 156/269 (57%), Positives = 190/269 (70%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 Q+ DL+R V G + DRTG GTRS FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF Sbjct: 14 QFEDLMRLVHTTGVAKGDRTGTGTRSLFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG+ NV +L G +IWDEWA DG+LGP+YGVQWRSWP DG IDQI+ +VQ LR++ Sbjct: 74 LRGERNVRWLQERGCTIWDEWARDDGDLGPVYGVQWRSWPTADGGHIDQIAEVVQQLRSN 133 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + +MAL PCH LFQFYV GKLSCQLYQRS D+FLG+P Sbjct: 134 PDSRRIIVSAWNVAELPQMALMPCHALFQFYVAPATHEGGRGKLSCQLYQRSADIFLGVP 193 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT MLA G+FI T GD HLY+NH Q + QL+R+P P + I Sbjct: 194 FNIASYALLTHMLAQQCDLDVGDFIWTGGDCHLYDNHTTQVETQLARTPFAYPTLHIKRR 253 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + +DF + Y+ H AI A V+V Sbjct: 254 PASIFDYACDDFEVLDYQHHPAIKAPVAV 282 >gi|326572961|gb|EGE22940.1| thymidylate synthase [Moraxella catarrhalis CO72] Length = 280 Score = 317 bits (813), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 153/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ Y Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFDFGFDDIQIADYQAHPAIKAPVAV 280 >gi|212550867|ref|YP_002309184.1| thymidylate synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549105|dbj|BAG83773.1| thymidylate synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 256 Score = 317 bits (812), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 147/264 (55%), Positives = 189/264 (71%), Gaps = 8/264 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL V+ G ++DRT GT S FGY M F+L GFPLLTTKK+H K ++HELL Sbjct: 1 MKQYLDLCNRVLSEGVKKKDRTCTGTVSIFGYHMHFNLKDGFPLLTTKKLHVKPIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL+ HGV IWD+WA+K+G+LGPIYG QW N +Q+ + V +++ Sbjct: 61 WFIKGDTNIKYLNDHGVYIWDKWANKNGDLGPIYGKQW--------NFKNQLRTAVDNIK 112 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV++WNV + MALPPCH LFQFY+ NG+LS Q+YQRS D+FLG+PFNIAS Sbjct: 113 NNPDSRRIIVNSWNVKDLTSMALPPCHVLFQFYISNGELSLQMYQRSADIFLGLPFNIAS 172 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLL M+A V + G+FIH LGD H+Y NH EQ LQL+RSP+TLP M IN + + Sbjct: 173 YSLLLKMVAQVTNLKEGKFIHVLGDAHIYLNHLEQIQLQLTRSPKTLPIMKINSEVKSIF 232 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y P+ I +VSV Sbjct: 233 DFKYEDFELERYTPYPHIKGEVSV 256 >gi|93007138|ref|YP_581575.1| thymidylate synthase [Psychrobacter cryohalolentis K5] gi|123264366|sp|Q1Q8B2|TYSY_PSYCK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|92394816|gb|ABE76091.1| thymidylate synthase [Psychrobacter cryohalolentis K5] Length = 290 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 150/277 (54%), Positives = 199/277 (71%), Gaps = 16/277 (5%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLLR V+ G+++ DRTG GT S FG Q+RF+L+ GFPLLTTKKVH KS+ +ELLWFL Sbjct: 14 YLDLLRLVLNEGTEKGDRTGTGTLSHFGAQLRFNLADGFPLLTTKKVHLKSITYELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DYDGN 107 G ++V YL ++GV IW+EWA + G+LGPIYG QWR++ Y+ + Sbjct: 74 NGSTHVDYLQQNGVRIWNEWATSEQTARFNRPAGDLGPIYGHQWRNYGATTTADGQYNSD 133 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQI+ +V+ ++ +P SRR IVS WN D++ALPPCH LFQF+V + KLSCQLYQRS Sbjct: 134 GVDQIAQVVEQIKTNPNSRRLIVSGWNPGEADQVALPPCHTLFQFFVADNKLSCQLYQRS 193 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY++LT M+A V + GEFI T GD H+Y NH EQ +LQL+RS TL Sbjct: 194 ADLFLGVPFNIASYAMLTHMVAQVCNLEVGEFIWTGGDCHIYQNHREQVELQLTRSLYTL 253 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + +NPN+ D+ +F YED ++ YE H AI A+V+V Sbjct: 254 PTLALNPNVKDIFAFNYEDISVDGYESHPAIKAQVAV 290 >gi|99081570|ref|YP_613724.1| thymidylate synthase [Ruegeria sp. TM1040] gi|123378854|sp|Q1GFV4|TYSY_SILST RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|99037850|gb|ABF64462.1| thymidylate synthase [Ruegeria sp. TM1040] Length = 277 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 146/277 (52%), Positives = 194/277 (70%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D L+H++ G + DRTG GT S FG Q R+DL++GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYHDALQHILDHGVETTDRTGTGTLSCFGMQQRYDLAEGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P Y Sbjct: 61 WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGYQWRKFPRLELAEGTLGDEPLYRAG 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQIS ++ +R P SRR IV+AWN + MALPPCH L+Q + GK+ QLYQRS Sbjct: 121 TVDQISELLDMIRKSPDSRRLIVTAWNPGDVPDMALPPCHSLWQLRILGGKMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LL MLA V G++ G F+HT+GD H+Y+NH EQ LQLSRSP++L Sbjct: 181 ADMFLGVPFNIASYALLLHMLAHVTGYEVGSFVHTMGDAHIYSNHMEQVKLQLSRSPKSL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+ I ++ + F+YEDF + Y+P I A V+V Sbjct: 241 PQLRIARDVSSIFDFKYEDFEILGYDPDPVIKAPVAV 277 >gi|319792495|ref|YP_004154135.1| thymidylate synthase [Variovorax paradoxus EPS] gi|315594958|gb|ADU36024.1| thymidylate synthase [Variovorax paradoxus EPS] Length = 280 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 154/269 (57%), Positives = 191/269 (71%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF Sbjct: 12 QYEDFMRHVDTHGVFKSDRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLKSIIQELLWF 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G SN ++L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS ++++L+ + Sbjct: 72 LTGSSNNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISDVIKTLKTN 131 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + KMAL PCH FQFYV + GKLSCQLYQRS D+FLG+P Sbjct: 132 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPPQAEGERGKLSCQLYQRSADIFLGVP 191 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A G+FI T GD H+Y+NH EQ LQLSR P P + I Sbjct: 192 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVKLQLSRDPYPYPTLNIKRK 251 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++YEDF + Y+ I A V+V Sbjct: 252 PDSIFDYQYEDFEVLDYKHGDPIKAPVAV 280 >gi|119475457|ref|ZP_01615810.1| Thymidylate synthase [marine gamma proteobacterium HTCC2143] gi|119451660|gb|EAW32893.1| Thymidylate synthase [marine gamma proteobacterium HTCC2143] Length = 279 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 155/280 (55%), Positives = 197/280 (70%), Gaps = 17/280 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ VI G+D+ DRTGVGTRS FG QMRFDLS+GFPL+TTKK+H KS+++EL+ Sbjct: 1 MQQYLDLMQDVIDNGTDKGDRTGVGTRSVFGRQMRFDLSEGFPLVTTKKIHLKSIIYELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G ++ ++L GVSIWD+WA DG+LGPIYG QWRSW DG+ IDQI+ +VQ + Sbjct: 61 WFLNGSTDNNWLKERGVSIWDDWALADGDLGPIYGKQWRSWDCPDGSTIDQIADLVQMIN 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVS WN A + + ALPPCH LFQFYV NG+LSCQLYQRS Sbjct: 121 KSPDSRRLIVSGWNPADLPDESIDPRANVEQGRAALPPCHTLFQFYVANGRLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL---QLSRSP 224 D+FLG+PFNIASYSLLT M+A + GEF+HTLGD HLY+NH +D+ QL R P Sbjct: 181 ADLFLGVPFNIASYSLLTHMIAQQCDLEVGEFVHTLGDCHLYSNHLT-SDIVYKQLQREP 239 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R LPQ+ + + +++EDF +Y+P I A ++V Sbjct: 240 RELPQLRLKRRPASIFDYQFEDFEFANYDPLPLIKAPIAV 279 >gi|229133069|ref|ZP_04261908.1| Thymidylate synthase [Bacillus cereus BDRD-ST196] gi|228650392|gb|EEL06388.1| Thymidylate synthase [Bacillus cereus BDRD-ST196] Length = 318 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLS GFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSNGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|149377241|ref|ZP_01894988.1| Thymidylate synthase [Marinobacter algicola DG893] gi|149358429|gb|EDM46904.1| Thymidylate synthase [Marinobacter algicola DG893] Length = 279 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 152/279 (54%), Positives = 190/279 (68%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ V+ G DR DRTGVGTRS FG Q+RFDL GFPL+TTKKVH +S++ ELL Sbjct: 1 MKAYLDLMKDVVDNGMDRGDRTGVGTRSVFGRQIRFDLQGGFPLVTTKKVHLRSIIQELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G ++ ++L VSIW+EWA ++G+LGPIYG QWRSW DG+ +DQIS +++ +R Sbjct: 61 WFLQGSTDNNWLKERNVSIWNEWALENGDLGPIYGKQWRSWHCPDGSTVDQISEVIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWN A + +MAL PCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 NKPNSRRLIVSAWNPAELPDESIGPQDNVRQGRMALAPCHCLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225 D+FLG+PFNIASY+LLT M+A GEF+HT GD HLY NH + QL R PR Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLGVGEFVHTFGDCHLYQNHLTDNIVFEQLKREPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LPQ++I + + EDF YEPH I A ++V Sbjct: 241 ALPQLVIKRKPSSIFEYELEDFEFDGYEPHPGIKAPIAV 279 >gi|229011512|ref|ZP_04168700.1| Thymidylate synthase [Bacillus mycoides DSM 2048] gi|228749803|gb|EEL99640.1| Thymidylate synthase [Bacillus mycoides DSM 2048] Length = 318 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVEGDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R P P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPHPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229079406|ref|ZP_04211948.1| Thymidylate synthase [Bacillus cereus Rock4-2] gi|228703939|gb|EEL56383.1| Thymidylate synthase [Bacillus cereus Rock4-2] Length = 318 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 196/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETFDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED + Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLKIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|121605666|ref|YP_982995.1| thymidylate synthase [Polaromonas naphthalenivorans CJ2] gi|166231723|sp|A1VQZ6|TYSY_POLNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120594635|gb|ABM38074.1| thymidylate synthase [Polaromonas naphthalenivorans CJ2] Length = 276 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 154/270 (57%), Positives = 193/270 (71%), Gaps = 7/270 (2%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DL+R V G+ + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH KS++ ELLW Sbjct: 7 HQYEDLMRLVATQGAFKADRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLKSIIQELLW 66 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL G S+ +L GV+IW+EWA DG+LGP+YGVQWRSWP DG IDQI+ ++++L+ Sbjct: 67 FLTGSSSNHWLTERGVTIWNEWARADGDLGPVYGVQWRSWPTPDGGHIDQIAEVIKTLKT 126 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGI 174 +P SRR IVSAWNVA +DKMAL PCH LFQFYV GKLSCQLYQRS D+FLG+ Sbjct: 127 NPDSRRIIVSAWNVADLDKMALMPCHALFQFYVAPATEAGGKGKLSCQLYQRSADIFLGV 186 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT M+A G+FI T GD H+Y+NH EQ LQL R+P P + I Sbjct: 187 PFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHQEQVALQLGRAPFAYPLLHIRR 246 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +++EDF Y+ H AI A V+V Sbjct: 247 KPDSIFDYQFEDFEFLDYQHHPAIKAPVAV 276 >gi|237746462|ref|ZP_04576942.1| thymidylate synthase,TS [Oxalobacter formigenes HOxBLS] gi|229377813|gb|EEO27904.1| thymidylate synthase,TS [Oxalobacter formigenes HOxBLS] Length = 277 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 145/275 (52%), Positives = 195/275 (70%), Gaps = 14/275 (5%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LL+ +++ G+D+ DRTG GTR+ FG MR DL G PLLTTK++H +S++ ELLWF Sbjct: 4 QYLNLLKEILETGADKGDRTGTGTRAVFGRMMRHDLKNGLPLLTTKRLHIRSIICELLWF 63 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+G +NV YLH + V+IWDEWA + G+LGPIYG QWRSW DG DQ+++++ S+R + Sbjct: 64 LQGGTNVRYLHENKVTIWDEWATETGDLGPIYGAQWRSWEGSDGKRYDQVAAVIDSIREN 123 Query: 123 PYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 P SRRHI+SAWNVAL+ KMAL PCH ++QF V G+LSC + QRSGD Sbjct: 124 PDSRRHIISAWNVALLPSEKKSPQDNVKDGKMALAPCHVMYQFQVAAGRLSCMMTQRSGD 183 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 +FLGIP+N AS +LLT M+A G + GE IH++GD+HLY NHF+QA LQLSR PR LP Sbjct: 184 IFLGIPYNTASTALLTHMIARQCGLEPGEVIHSIGDLHLYKNHFDQARLQLSREPRALPG 243 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + N + + +DF + Y+PH AI A ++V Sbjct: 244 LKLK-NKPSIFDYTLDDFEITGYDPHPAIAAPIAV 277 >gi|228920949|ref|ZP_04084287.1| Thymidylate synthase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838738|gb|EEM84041.1| Thymidylate synthase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 318 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CDLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|311740900|ref|ZP_07714727.1| thymidylate synthase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304420|gb|EFQ80496.1| thymidylate synthase [Corynebacterium pseudogenitalium ATCC 33035] Length = 275 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 148/261 (56%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++ +V+ ELLWFL Sbjct: 16 YEDLLRRVLDKGTPKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHAVLGELLWFL 75 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G+SN+ +L + V IW+EWAD +GELGP+YGVQWRSWP DG IDQI + +L+ +P Sbjct: 76 KGESNIKFLQDNKVRIWNEWADDNGELGPVYGVQWRSWPTPDGQHIDQIQQALDTLKNNP 135 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNVA +DKMAL PCH LFQ YV +G LS Q+YQRS D+FLG+PFNIASY+ Sbjct: 136 DSRRNLVSAWNVAELDKMALMPCHLLFQLYVADGTLSMQVYQRSADMFLGVPFNIASYAA 195 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GE I T GD H+YN+H EQ QLSR PR PQ+ ++ D+ S+ Sbjct: 196 LTHMFAQQAGLKVGELIWTGGDCHIYNDHVEQVKEQLSREPRPYPQLNLH-KAEDMFSYD 254 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + DF + Y+PH I A+VSV Sbjct: 255 FADFEIEGYDPHPTIKAQVSV 275 >gi|228965208|ref|ZP_04126302.1| Thymidylate synthase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794442|gb|EEM41954.1| Thymidylate synthase [Bacillus thuringiensis serovar sotto str. T04001] Length = 318 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTSGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +N ++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|184200215|ref|YP_001854422.1| thymidylate synthase [Kocuria rhizophila DC2201] gi|183580445|dbj|BAG28916.1| thymidylate synthase [Kocuria rhizophila DC2201] Length = 273 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 151/266 (56%), Positives = 191/266 (71%), Gaps = 5/266 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GT S FG Q+R+DLS FPLLTTK+VH++S+ ELLWFL Sbjct: 8 YEDLLRDVLEHGTPKTDRTGTGTLSVFGRQIRYDLSHSFPLLTTKRVHFRSLALELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 G SNV +L GVSIWDEWAD++G+LGP+YGVQWRSWP G IDQI+ +V+S+R P Sbjct: 68 SGSSNVRWLQERGVSIWDEWADENGDLGPVYGVQWRSWPAGHGETIDQIARVVESIRTTP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNG--KLSCQLYQRSGDVFLGIPFNI 178 SRRHIV+AWN A +D+MALPPCH LFQFYV ++G LSCQLYQRS D+FLG+PFNI Sbjct: 128 DSRRHIVTAWNPAEVDRMALPPCHALFQFYVQPREDGPDALSCQLYQRSADLFLGVPFNI 187 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 ASY+LLT+M+A GEF+ T GD H+Y NH EQ QL+R P P + + Sbjct: 188 ASYALLTVMVAQQCDLVPGEFVWTGGDCHIYTNHLEQVRTQLAREPYPYPTLRLTRRPDS 247 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + +R+EDF + Y+ H I A V+V Sbjct: 248 IFDYRFEDFAVEGYQHHPGIKAPVAV 273 >gi|229150461|ref|ZP_04278677.1| Thymidylate synthase [Bacillus cereus m1550] gi|228632954|gb|EEK89567.1| Thymidylate synthase [Bacillus cereus m1550] Length = 318 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CRLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|296113703|ref|YP_003627641.1| thymidylate synthase [Moraxella catarrhalis RH4] gi|295921397|gb|ADG61748.1| thymidylate synthase [Moraxella catarrhalis RH4] gi|326562443|gb|EGE12762.1| thymidylate synthase [Moraxella catarrhalis 7169] gi|326562812|gb|EGE13107.1| thymidylate synthase [Moraxella catarrhalis 46P47B1] gi|326570637|gb|EGE20673.1| thymidylate synthase [Moraxella catarrhalis BC7] gi|326574801|gb|EGE24735.1| thymidylate synthase [Moraxella catarrhalis O35E] Length = 280 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 152/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ Y Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT ++A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHVVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQIADYQAHPAIKAPVAV 280 >gi|251796664|ref|YP_003011395.1| thymidylate synthase [Paenibacillus sp. JDR-2] gi|247544290|gb|ACT01309.1| thymidylate synthase [Paenibacillus sp. JDR-2] Length = 320 Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 156/312 (50%), Positives = 193/312 (61%), Gaps = 50/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL LLRHV++ G + DRTG GT STFGYQMRFDL+KGFP+LTTK+V +K +V ELLWF Sbjct: 9 EYLQLLRHVLENGVKKEDRTGTGTISTFGYQMRFDLAKGFPILTTKRVPFKLIVSELLWF 68 Query: 63 LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84 ++GDSN+ YL +H IWDEWA Sbjct: 69 IKGDSNIRYLLKHKNHIWDEWAFKRWVESTDYNGPDMTNFGLRSQTDEAFNVVYQEQMDK 128 Query: 85 ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 +K G+LG +YG QWR W G IDQ+ I+ +++ +P SRR IVSA Sbjct: 129 FTNLVLTDDAFAEKYGDLGNVYGKQWREWRTTQGETIDQLKGIIDTIKKNPDSRRLIVSA 188 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH +FQFYV NGKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A Sbjct: 189 WNPEDVPSMALPPCHTMFQFYVINGKLSCQLYQRSGDIFLGIPFNIASYALLTHLIAQEC 248 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G GEFIHTLGD H+Y NH EQ D+QL R R LP + INP++ + ED L +Y Sbjct: 249 GLGVGEFIHTLGDAHIYLNHLEQIDIQLQRDMRELPVLAINPDVSSIFDAEVEDIKLENY 308 Query: 253 EPHAAILAKVSV 264 +PH I A V+V Sbjct: 309 QPHPTIKAPVAV 320 >gi|75764380|ref|ZP_00743896.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228900828|ref|ZP_04065043.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222] gi|74488132|gb|EAO51832.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228858754|gb|EEN03199.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222] Length = 318 Score = 315 bits (807), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +N ++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|227504242|ref|ZP_03934291.1| thymidylate synthase [Corynebacterium striatum ATCC 6940] gi|227199197|gb|EEI79245.1| thymidylate synthase [Corynebacterium striatum ATCC 6940] Length = 265 Score = 315 bits (807), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 148/261 (56%), Positives = 191/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+++ DRTG GTRS FG Q+R++L+ FPLLTTKKV++ V+ ELLWFL Sbjct: 6 YEDLLRKVLEEGAEKGDRTGTGTRSIFGAQLRYNLADSFPLLTTKKVYFHGVIGELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +GDSNV +L + V IW+EWAD DGELGP+YGVQWRSWP DG +DQI + +L+ +P Sbjct: 66 KGDSNVKWLQDNNVRIWNEWADADGELGPVYGVQWRSWPTPDGTHVDQIQQALDTLQNNP 125 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNVA +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFN+ASY+ Sbjct: 126 DSRRNLVSAWNVAELDKMALMPCHLLFQLYVADGKLSLQVYQRSADMFLGVPFNLASYAA 185 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 L M A G + GE I T GD H+YN+H EQ QLSR PR PQ+ ++ L + Sbjct: 186 LAHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSREPRPYPQLKLH-KADSLFDYT 244 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++DF + Y+PH I A+VSV Sbjct: 245 FDDFEVVGYDPHPTIKAQVSV 265 >gi|228997327|ref|ZP_04156949.1| Thymidylate synthase [Bacillus mycoides Rock3-17] gi|229004952|ref|ZP_04162679.1| Thymidylate synthase [Bacillus mycoides Rock1-4] gi|228756300|gb|EEM05618.1| Thymidylate synthase [Bacillus mycoides Rock1-4] gi|228762419|gb|EEM11344.1| Thymidylate synthase [Bacillus mycoides Rock3-17] Length = 318 Score = 315 bits (806), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 196/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL ++ +IW+EWA K Sbjct: 66 FMKGDTNIRYLLQNNNNIWNEWAFKSWVESDAYEGPDMTDFGLRSQQDEEFKKQYDEQMD 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR+W G IDQ+ +++ ++ P SRR +VS Sbjct: 126 LFKKNVLEDDDFANQYGYLGDVYGKQWRAWKTTAGETIDQLKDVIEMIKKTPDSRRLLVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P + +NP++ + F ED TL Sbjct: 246 CGLEAGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSVFDFEMEDLTLEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229085186|ref|ZP_04217431.1| Thymidylate synthase [Bacillus cereus Rock3-44] gi|228698123|gb|EEL50863.1| Thymidylate synthase [Bacillus cereus Rock3-44] Length = 318 Score = 315 bits (806), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 196/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL ++ +IW+EWA K+ Sbjct: 66 FMKGDTNIRYLLQNNNNIWNEWAFKNWVESDAYEGPDMTDFGLRSQQDEEFKAQYDEQME 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR+W G IDQ+ +++ ++ P SRR +VS Sbjct: 126 LFKKNVLENDAFANQYGYLGDVYGKQWRAWKTTVGETIDQLKDVIEMIKKTPDSRRLLVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P + +NP++ F ED TL Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSAFDFEMEDLTLEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|227832620|ref|YP_002834327.1| Thymidylate synthase [Corynebacterium aurimucosum ATCC 700975] gi|262182896|ref|ZP_06042317.1| thymidylate synthase [Corynebacterium aurimucosum ATCC 700975] gi|254790235|sp|C3PEY5|TYSY_CORA7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|227453636|gb|ACP32389.1| Thymidylate synthase [Corynebacterium aurimucosum ATCC 700975] Length = 268 Score = 314 bits (805), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 149/261 (57%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GT S FG Q+R++L++ FPLLTTKKV++ V+ ELLWFL Sbjct: 9 YEDLLRRVLEEGAPKGDRTGTGTLSLFGAQLRYNLAESFPLLTTKKVYFHGVIGELLWFL 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L + V IW+EWAD+DGELGP+YGVQWRSWP DG IDQI + +L+ +P Sbjct: 69 RGDSNVKWLQENKVRIWNEWADEDGELGPVYGVQWRSWPTPDGQHIDQIQVALDTLKNNP 128 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNV+ +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFN+ASY+ Sbjct: 129 DSRRNLVSAWNVSELDKMALMPCHLLFQLYVADGKLSMQVYQRSADMFLGVPFNLASYAA 188 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GE I T GD H+YN+H EQ QLSR PR PQ+ ++ L + Sbjct: 189 LTHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSRQPREYPQLKLH-KAESLFDYD 247 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++DF + Y+PH I A+VSV Sbjct: 248 FDDFEVIGYDPHPTIKAQVSV 268 >gi|218897205|ref|YP_002445616.1| thymidylate synthase [Bacillus cereus G9842] gi|218544363|gb|ACK96757.1| thymidylate synthase [Bacillus cereus G9842] Length = 318 Score = 314 bits (805), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKGWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYALLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +N ++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|284992331|ref|YP_003410885.1| thymidylate synthase [Geodermatophilus obscurus DSM 43160] gi|284065576|gb|ADB76514.1| thymidylate synthase [Geodermatophilus obscurus DSM 43160] Length = 272 Score = 314 bits (805), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 149/262 (56%), Positives = 193/262 (73%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLR V++ G+ ++DRTG GT S FG ++R+DL++ FPL+TTK VH++S+ +ELLWF Sbjct: 12 QYEDLLRRVLEQGTPKQDRTGTGTVSLFGERLRYDLAERFPLITTKSVHFRSIAYELLWF 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L + VSIWDEWA +GELGP+YGVQWRSWP G +DQI+ ++++LR D Sbjct: 72 LRGDSNVRWLQENRVSIWDEWASPEGELGPVYGVQWRSWPTPGGEHVDQIAGVLETLRTD 131 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNVA + MAL PCH LFQF+V +G+LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 132 PDSRRMVVSAWNVAALPDMALAPCHALFQFHVADGRLSCQLYQRSADMFLGVPFNIASYA 191 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A+ +G G+ I GD H+Y+NH +Q QLSR P + + P L + Sbjct: 192 LLTRMVAAQVGLAPGDCIWVGGDCHVYSNHVDQVREQLSREVLPFPTLDLAP-APSLFDY 250 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YE FTLR Y H AI A V+V Sbjct: 251 TYEHFTLRDYRHHPAIRAAVAV 272 >gi|255324809|ref|ZP_05365922.1| thymidylate synthase [Corynebacterium tuberculostearicum SK141] gi|255298109|gb|EET77413.1| thymidylate synthase [Corynebacterium tuberculostearicum SK141] Length = 267 Score = 314 bits (805), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 147/261 (56%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL+ V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++ +V+ ELLWFL Sbjct: 8 YEDLLKKVLETGTPKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHAVLGELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G+SN+ +L + V IW+EWAD +GELGP+YGVQWRSWP DG IDQI + +L +P Sbjct: 68 KGESNIKFLQDNKVRIWNEWADDNGELGPVYGVQWRSWPTPDGQHIDQIQQALDTLNNNP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNVA +DKMAL PCH LFQ YV +G LS Q+YQRS D+FLG+PFNIASY+ Sbjct: 128 DSRRNLVSAWNVADLDKMALMPCHLLFQLYVADGTLSMQVYQRSADMFLGVPFNIASYAA 187 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GE I T GD H+YN+H EQ QLSR PR PQ+ ++ D+ S+ Sbjct: 188 LTHMFAQQAGLKVGELIWTGGDCHIYNDHVEQVKEQLSREPRPYPQLNLH-KAEDMFSYD 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + DF + Y+PH I A+VSV Sbjct: 247 FADFEIEGYDPHPTIKAQVSV 267 >gi|71066565|ref|YP_265292.1| thymidylate synthase [Psychrobacter arcticus 273-4] gi|71039550|gb|AAZ19858.1| thymidylate synthase [Psychrobacter arcticus 273-4] Length = 300 Score = 314 bits (804), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 148/277 (53%), Positives = 199/277 (71%), Gaps = 16/277 (5%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLLR V+ G+++ DRTG GT S FG Q+RFDL+ GFPLLTTKKVH+KS+++ELLWFL Sbjct: 24 YLDLLRLVLSEGTEKGDRTGTGTVSHFGAQLRFDLADGFPLLTTKKVHFKSIIYELLWFL 83 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DYDGN 107 G ++V YL ++GV IW+EWA + G+LGPIYG QWR++ YD + Sbjct: 84 SGSTHVDYLQQNGVRIWNEWATAEQTARFKRLAGDLGPIYGHQWRNYGATKVEDGSYDND 143 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 DQIS +++ ++ +P SRR IVS WN +++ALPPCH +FQF+V + KLSCQLYQRS Sbjct: 144 GFDQISQVIEQIKTNPNSRRLIVSGWNPGEAEQVALPPCHTMFQFFVADNKLSCQLYQRS 203 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLT M+A V + GEFI T GD H+Y NH EQ +LQL+R TL Sbjct: 204 ADLFLGVPFNIASYALLTHMVAQVCDLEVGEFIWTGGDCHIYQNHREQVELQLTRELYTL 263 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + +NP++ D+ +F Y+D ++ YE H AI A+V+V Sbjct: 264 PTLTLNPDVQDIFAFNYDDISVNGYESHPAIKAQVAV 300 >gi|27904867|ref|NP_777993.1| thymidylate synthase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29428168|sp|P59427|TYSY_BUCBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|27904265|gb|AAO27098.1| thymidylate synthase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 264 Score = 314 bits (804), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 146/264 (55%), Positives = 193/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL+ ++K GS+R+DRTG+GT S FGY M F+L GFPL+TTKK H+ ++VHELL Sbjct: 1 MKSYLVLLKKILKEGSNRKDRTGIGTLSVFGYHMEFNLKLGFPLITTKKCHFPAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ H +SIW+ WAD+ G LGPIYG QWRSW DG VIDQI +++ ++ Sbjct: 61 WFLKGDTNIKYLNDHNISIWNPWADERGYLGPIYGEQWRSWKTKDGRVIDQIDNVIHLIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV + KMAL PCH LFQF+V + L CQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPNSRRIVVSSWNVGDLHKMALLPCHVLFQFHVVDHVLHCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A + G FI T GDVHLY NH +QA Q+ R P LP+++IN + Sbjct: 181 YSLLTHMIAQQCNLKVGNFIWTGGDVHLYKNHIKQAKKQILRRPYLLPKLVINRKPTQIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++ +DF L +Y+ H +I AK+++ Sbjct: 241 NYLLQDFNLLNYKYHPSIHAKIAI 264 >gi|221124392|ref|XP_002161436.1| PREDICTED: similar to Thymidylate synthase [Hydra magnipapillata] Length = 265 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 8/265 (3%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 +RHV G + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH +S++ ELLWFL G S Sbjct: 1 MRHVHTTGVFKSDRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLRSIIQELLWFLTGSS 60 Query: 68 NVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126 N ++L GV+IWDEWA+ + G+LGP+YGVQWRSWP DG IDQI+ ++++L+++P SR Sbjct: 61 NNNWLKERGVTIWDEWANPETGDLGPVYGVQWRSWPTPDGGHIDQIADVIKTLKSNPDSR 120 Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIA 179 R IVSAWNVA + KMAL PCH FQFYV G+LSCQLYQRS D+FLG+PFNIA Sbjct: 121 RIIVSAWNVAELSKMALMPCHAFFQFYVAPATEPGGKGRLSCQLYQRSADIFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LLT M+A G+FI T GD H+Y+NH EQ +LQLSR+P P + I + Sbjct: 181 SYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHTEQVELQLSRAPMAYPTLNIKRKPESI 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + YE H AI A V+V Sbjct: 241 FDYQFEDFEVLGYECHPAIKAPVAV 265 >gi|154507538|ref|ZP_02043180.1| hypothetical protein ACTODO_00017 [Actinomyces odontolyticus ATCC 17982] gi|153799327|gb|EDN81747.1| hypothetical protein ACTODO_00017 [Actinomyces odontolyticus ATCC 17982] Length = 267 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 149/262 (56%), Positives = 191/262 (72%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL +++ G+ + DRTG GTRS FG Q+R+DLSKGFPL+TTK+VH KSVV ELLWF Sbjct: 7 QYEDLLARIMREGTPKGDRTGTGTRSLFGAQLRYDLSKGFPLITTKRVHLKSVVGELLWF 66 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G SNVS+L +G+ IW+EWADKDGELGP+YGVQWRSW DG IDQIS ++++L+ + Sbjct: 67 LSGSSNVSWLQDNGIRIWNEWADKDGELGPVYGVQWRSWNAGDGRHIDQISQVLETLKTN 126 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNV + +MAL PCH FQ YV +G+LS QLYQRS D+FLG+PFNIASYS Sbjct: 127 PDSRRMVVSAWNVGDLPQMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASYS 186 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M A G + G+FI T GD H+Y+NH EQ QLSR P P++ + + + Sbjct: 187 LLTHMFAQQAGLEVGDFIWTGGDCHIYSNHTEQVTEQLSREPYPFPRLEL-AKAPSMFEY 245 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 ++D ++ Y+ H I A V+V Sbjct: 246 SFDDISVMDYQHHPTIKAPVAV 267 >gi|299821697|ref|ZP_07053585.1| thymidylate synthase [Listeria grayi DSM 20601] gi|299817362|gb|EFI84598.1| thymidylate synthase [Listeria grayi DSM 20601] Length = 314 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 153/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L + V++ G+ + DRTG GT STFGYQMRFDL+KGFP+LTTK+V ++ VV ELL Sbjct: 1 MKQYLELEKFVLEHGTQKGDRTGTGTISTFGYQMRFDLAKGFPILTTKRVAFRLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------DKD----------- 87 WFL GD+N+ YL +H +IW+EWA +KD Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERYVKSEAYKGPDMTDFGLRAEKDAAFREVYKQEM 120 Query: 88 -----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 GELG IYG QWR W G IDQ+ ++++++ P SRR IV Sbjct: 121 EAFKQAILTDEAFAATYGELGNIYGKQWREWKTSSGETIDQLKEVIEAIKKTPDSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDVPTMALPPCHTMFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G + GEFIHT+GD HLYNNH EQ QLSR P+ LP + + + F D +L Sbjct: 241 ETGLEVGEFIHTMGDAHLYNNHIEQVKEQLSREPKALPTLRLAEEPASIFDFEVADISLE 300 Query: 251 SYEPHAAILAKVSV 264 YEPH AI A +SV Sbjct: 301 GYEPHPAIKAPISV 314 >gi|315606206|ref|ZP_07881233.1| thymidylate synthase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312094|gb|EFU60184.1| thymidylate synthase [Actinomyces sp. oral taxon 180 str. F0310] Length = 267 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 149/262 (56%), Positives = 189/262 (72%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL ++ G+ + DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KSVV ELLWF Sbjct: 7 QYEDLLARIMSEGTPKGDRTGTGTRSVFGAQLRYDLSRGFPLITTKRVHVKSVVGELLWF 66 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G SNVS+L HG+ IW+EWAD +G+LGP+YGVQWRSW DG IDQISS++++LR D Sbjct: 67 LSGSSNVSWLQEHGIRIWNEWADGNGDLGPVYGVQWRSWNAGDGRRIDQISSVLETLRTD 126 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNV + +MAL PCH FQ YV +G+LS QLYQRS D+FLG+PFNIASYS Sbjct: 127 PDSRRMVVSAWNVGDLKEMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASYS 186 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M A G + G+F+ T GD H+Y+NH EQ QLSR P P++ + + + Sbjct: 187 LLTHMFAQQAGLEVGDFVWTGGDCHIYSNHTEQVREQLSRDPYPFPRLEL-IKARSMFDY 245 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 +ED + Y+ H I A V+V Sbjct: 246 SFEDISFAGYQHHPTIKAPVAV 267 >gi|228991229|ref|ZP_04151187.1| Thymidylate synthase [Bacillus pseudomycoides DSM 12442] gi|228768453|gb|EEM17058.1| Thymidylate synthase [Bacillus pseudomycoides DSM 12442] Length = 318 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 196/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL ++ +IW+EWA K Sbjct: 66 FMKGDTNIRYLLQNNNNIWNEWAFKSWVESDAYEGPDMTDFGLRSQQDEEFKKQYDEQMD 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR+W G IDQ+ +++ ++ P SRR +VS Sbjct: 126 LFKKNVLEDDDFANQYGYLGDVYGKQWRAWKTTAGETIDQLKDVIEMIKKTPDSRRLLVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P + +NP++ + F +D TL Sbjct: 246 CGLEAGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSVFDFEMDDLTLEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|71894413|ref|YP_278521.1| thymidylate synthase [Mycoplasma synoviae 53] gi|123747941|sp|Q4A611|TYSY_MYCS5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|71851201|gb|AAZ43810.1| thymidylate synthase [Mycoplasma synoviae 53] Length = 289 Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 153/294 (52%), Positives = 197/294 (67%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL H+ G+ ++DRT +GT S FG Q R++L +GFPLLTTKK+ WK++ HELL Sbjct: 1 MKQYLHLLEHIKTSGTFKKDRTNIGTISLFGLQARYNLKEGFPLLTTKKMAWKAICHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WFL+GD+N+ YL + V+IW+EW A K GELG Sbjct: 61 WFLKGDTNIKYLVDNNVNIWNEWPYEIFKKSNDYQGESLKEFSQKIKEDSSFAQKYGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D+ G +DQIS ++ ++ +P SRR IVSAWNVA IDKMALPPCH FQ Sbjct: 121 PVYGKQWR---DFFG--VDQISQVINDIKNNPTSRRLIVSAWNVAQIDKMALPPCHAFFQ 175 Query: 152 FYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FYV DN +LS LYQRSGD+FLG+PFNIASYSLL M+A V + GEFIHT+GD H+Y+ Sbjct: 176 FYVNDNNELSLHLYQRSGDMFLGVPFNIASYSLLLSMVAQVTNLKVGEFIHTIGDAHIYS 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH +Q + QL R+P LP++I+N NI ++ F +ED L +Y H I AKV+V Sbjct: 236 NHIDQVNTQLERAPYKLPKLILNKNIKNIFDFTFEDIELENYISHETIKAKVAV 289 >gi|120555343|ref|YP_959694.1| thymidylate synthase [Marinobacter aquaeolei VT8] gi|166231710|sp|A1U3D8|TYSY_MARAV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120325192|gb|ABM19507.1| thymidylate synthase [Marinobacter aquaeolei VT8] Length = 279 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 149/279 (53%), Positives = 191/279 (68%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ V+ G D+ DRTGVGTRS FG QMRF+L GFPL+TTKKVH +S+++ELL Sbjct: 1 MKAYLDLMQDVVDNGFDKGDRTGVGTRSVFGRQMRFNLQDGFPLVTTKKVHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G ++ ++L VSIW+EWA ++G+LGPIYG QWRSW +DG VIDQIS +++ +R Sbjct: 61 WFLKGSTDNTWLAERKVSIWNEWALENGDLGPIYGKQWRSWQCHDGRVIDQISEVIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWN A + +MAL PCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 TKPNSRRLIVSAWNPAELPDESISPQDNVREGRMALAPCHCLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225 D+FLG+PFNIASY+LLT M+A GEF+HT GD HLY NH + QL R PR Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYRNHLTDDIVFEQLRREPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP+++I + + EDF Y+P I A +++ Sbjct: 241 ALPKLVIKRKPESIFGYELEDFEFEGYDPSPVIKAPIAI 279 >gi|332185611|ref|ZP_08387359.1| thymidylate synthase [Sphingomonas sp. S17] gi|332014589|gb|EGI56646.1| thymidylate synthase [Sphingomonas sp. S17] Length = 264 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 151/266 (56%), Positives = 186/266 (69%), Gaps = 4/266 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G + DRTG GT S FG+QMRFDL++GFP+LTTKK+H +S++ ELL Sbjct: 1 MRQYLDLMDRVLTQGVQQMDRTGTGTLSVFGHQMRFDLAQGFPVLTTKKLHLRSIIVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L VSIWDEWAD+ G+LGP+YG QWR W DG IDQI+ +++ +R Sbjct: 61 WFLRGDTNVRWLQEQKVSIWDEWADEAGDLGPVYGKQWRDWATADGRHIDQIAELIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN + MAL PCHCLFQ +V NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 TQPASRRQIVSAWNPGDLHAMALAPCHCLFQTHVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII--NPNIVD 238 Y+LLT MLA + GEFI T GD HLY NH EQA QL R P LP++ I P+ +D Sbjct: 181 YALLTHMLAQQCDLEVGEFIWTGGDCHLYLNHLEQARTQLGREPGALPRLEITRKPDAID 240 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + EDF L Y I A V++ Sbjct: 241 --GYALEDFVLHDYVAQRHIKAVVAI 264 >gi|289178234|gb|ADC85480.1| Thymidylate synthase [Bifidobacterium animalis subsp. lactis BB-12] Length = 297 Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL Sbjct: 34 YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 93 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L H V IWDEWAD++G+LGP+YGVQWRSWP D IDQIS++++ + Sbjct: 94 KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 153 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 154 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 213 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P P+M I L Sbjct: 214 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEIR-KADSL 272 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++Y +F + Y H I A ++V Sbjct: 273 FDYQYSNFHIADYRYHPTIKAPIAV 297 >gi|183602019|ref|ZP_02963388.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis HN019] gi|241190505|ref|YP_002967899.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195911|ref|YP_002969466.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218904|gb|EDT89546.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis HN019] gi|240248897|gb|ACS45837.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250465|gb|ACS47404.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793492|gb|ADG33027.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis V9] Length = 290 Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL Sbjct: 27 YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L H V IWDEWAD++G+LGP+YGVQWRSWP D IDQIS++++ + Sbjct: 87 KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P P+M I L Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEIR-KADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++Y +F + Y H I A ++V Sbjct: 266 FDYQYSNFHIADYRYHPTIKAPIAV 290 >gi|47458869|ref|YP_015731.1| thymidylate synthase [Mycoplasma mobile 163K] gi|62901312|sp|Q6KIQ6|TYSY_MYCMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|47458197|gb|AAT27520.1| thymidylate synthase [Mycoplasma mobile 163K] Length = 288 Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 149/293 (50%), Positives = 194/293 (66%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL+ +++ G + DRT GT S FG Q R+DLSKGFPL+TTKKVH KS++ ELL Sbjct: 1 MEQYLSLLKEILEKGQKKEDRTNTGTISYFGTQRRYDLSKGFPLVTTKKVHLKSIIFELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL +GV+IW+EW A K GELG Sbjct: 61 WFIKGDTNIKYLVDNGVNIWNEWPYETFKKSKDFNGESLADFVLKIKSDTLFAKKYGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ N DQ+ +++++ +P SRR IVSAW I KMALPPCH FQ Sbjct: 121 PVYGKQWRNF-----NGTDQLFDAIETIKKNPDSRRIIVSAWAANEISKMALPPCHAFFQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV+N KLS QLYQRSGD FLG+PFNIASYS+L M+A + ++ GEFIHT+GD H+Y N Sbjct: 176 FYVNNNKLSLQLYQRSGDTFLGVPFNIASYSILLAMVAQITNYEVGEFIHTIGDTHIYLN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ + QLSR P LP++++N I ++ F+YED + YE H AI AKV+V Sbjct: 236 HLEQVEEQLSRKPLKLPKLVLNKKIKNIDDFKYEDIEIIDYESHPAIKAKVAV 288 >gi|39938779|ref|NP_950545.1| thymidylate synthase [Onion yellows phytoplasma OY-M] gi|62901327|sp|Q6YQT0|TYSY_ONYPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|39721888|dbj|BAD04378.1| thymidylate synthase [Onion yellows phytoplasma OY-M] Length = 288 Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 149/293 (50%), Positives = 201/293 (68%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+ YLDL R +++ GS R DRT GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL Sbjct: 1 MNTYLDLCRFILQKGSFRNDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WFL+GD+N+ YL ++ V+IW+EW A K G LG Sbjct: 61 WFLKGDTNICYLVQNNVNIWNEWPYQKYQQSAFFQNETLKEFLEKIKNDPLFAIKHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D++G +DQI ++ ++ +P SRR I+++WN L+++MALPPCH L Q Sbjct: 121 PVYGKQWR---DFNG--VDQIKFLISEIKTNPNSRRLILNSWNPPLLNQMALPPCHVLIQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V Q EFIHTLGD H+Y+N Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H Q Q+ R+P+ LPQMI+NP+I ++ F++ DFTL++Y+ + ++V Sbjct: 236 HLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFSDFTLQNYQCDGILKGDIAV 288 >gi|152002501|dbj|BAF73525.1| thymidylate synthase [Onion yellows phytoplasma OY-W] Length = 288 Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 149/293 (50%), Positives = 201/293 (68%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+ YLDL R +++ GS R DRT GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL Sbjct: 1 MNTYLDLCRFILQKGSFRNDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WFL+GD+N+ YL ++ V+IW+EW A K G LG Sbjct: 61 WFLKGDTNICYLVQNNVNIWNEWPYQKYQQSAFFQNETLKEFVEKIKNDPLFAIKHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D++G +DQI ++ ++ +P SRR I+++WN L+++MALPPCH L Q Sbjct: 121 PVYGKQWR---DFNG--VDQIKFLISEIKTNPNSRRLILNSWNPPLLNQMALPPCHVLIQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V Q EFIHTLGD H+Y+N Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H Q Q+ R+P+ LPQMI+NP+I ++ F++ DFTL++Y+ + ++V Sbjct: 236 HLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFSDFTLQNYQCDGILKGDIAV 288 >gi|228933544|ref|ZP_04096395.1| Thymidylate synthase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826142|gb|EEM71924.1| Thymidylate synthase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 318 Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 148/313 (47%), Positives = 195/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL + +IW+EWA Sbjct: 66 FMKGDTNIRYLLQQNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + G F+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGAFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH I A V+V Sbjct: 306 YDPHPVIKAPVAV 318 >gi|219682928|ref|YP_002469311.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis AD011] gi|219620578|gb|ACL28735.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis AD011] Length = 266 Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL Sbjct: 3 YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 62 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L H V IWDEWAD++G+LGP+YGVQWRSWP D IDQIS++++ + Sbjct: 63 KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 123 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P P+M I L Sbjct: 183 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEIR-KADSL 241 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++Y +F + Y H I A ++V Sbjct: 242 FDYQYSNFHIADYRYHPTIKAPIAV 266 >gi|85057710|ref|YP_456626.1| thymidylate synthase [Aster yellows witches'-broom phytoplasma AYWB] gi|123738900|sp|Q2NJ46|TYSY_AYWBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|84789815|gb|ABC65547.1| thymidylate synthase [Aster yellows witches'-broom phytoplasma AYWB] Length = 288 Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 149/293 (50%), Positives = 202/293 (68%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+ YLDL R + + GS R+DRT GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL Sbjct: 1 MNTYLDLCRFIFQKGSFRKDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WFL+GD+N+ YL ++ V+IW+EW A K G LG Sbjct: 61 WFLKGDTNIFYLVQNNVNIWNEWPYQKYQQSDFFQNETLKEFVKKIKNDPLFATKHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D++G +DQI ++ ++A+P SRR I+++WN +L+++MALPPCH L Q Sbjct: 121 PVYGKQWR---DFNG--VDQIKFLISEIKANPNSRRLILNSWNPSLLNQMALPPCHVLIQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V Q EFIHTLGD H+Y+N Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H Q Q+ R+P+ LPQMI+NP+I ++ F++ DF L++Y+ + ++V Sbjct: 236 HITQVQTQIQRTPKKLPQMILNPDIKNIDDFKFIDFILKNYQCDGILKGDIAV 288 >gi|192362015|ref|YP_001980991.1| thymidylate synthase [Cellvibrio japonicus Ueda107] gi|190688180|gb|ACE85858.1| thymidylate synthase [Cellvibrio japonicus Ueda107] Length = 282 Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 150/279 (53%), Positives = 192/279 (68%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V++ G R DRTG GTRS FG Q+RFDL++GFPL+TTK VH KSV+ ELL Sbjct: 4 MKQYLDLMRDVVENGVTRGDRTGTGTRSVFGRQLRFDLARGFPLVTTKTVHLKSVIVELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G ++V++L G SIW+EWA + G+LGP+YG QWRSW DG+ IDQIS +++ ++ Sbjct: 64 WFLQGRTDVTWLQERGCSIWNEWAAESGDLGPVYGKQWRSWACPDGSTIDQISQVIEQIK 123 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 A P SRR IVSAWN A + +MAL CH LFQFYV +GKLSCQLYQRS Sbjct: 124 AKPNSRRLIVSAWNPADLPDEALSPQENVRQGRMALAACHTLFQFYVADGKLSCQLYQRS 183 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225 D+FLG+PFNIASY+LLT M+A G+F+HT GD HLYNNH + QL+R PR Sbjct: 184 ADLFLGVPFNIASYALLTHMIAQQCDLGVGDFVHTFGDCHLYNNHITDDIVYEQLTREPR 243 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP++II + + EDF Y+P+ I A ++V Sbjct: 244 NLPRLIIRRRPSSIFDYELEDFEFEGYQPYPRIAAPIAV 282 >gi|293189215|ref|ZP_06607938.1| thymidylate synthase [Actinomyces odontolyticus F0309] gi|292821678|gb|EFF80614.1| thymidylate synthase [Actinomyces odontolyticus F0309] Length = 267 Score = 311 bits (798), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 148/262 (56%), Positives = 190/262 (72%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL +++ G+ + DRTG GTRS FG Q+R+DLSKGFPL+TTK+VH KSVV ELLWF Sbjct: 7 QYEDLLARIMREGTPKGDRTGTGTRSLFGAQLRYDLSKGFPLITTKRVHLKSVVGELLWF 66 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G SNVS+L +G+ IW+EWAD+DGELGP+YGVQWRSW DG IDQIS ++++L+ + Sbjct: 67 LSGSSNVSWLQDNGIRIWNEWADEDGELGPVYGVQWRSWNAGDGRHIDQISQVLETLKTN 126 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNV + +MAL PCH FQ YV +G+LS QLYQRS D+FLG+PFNIASYS Sbjct: 127 PDSRRMVVSAWNVGDLPQMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASYS 186 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M A G + G+FI T GD H+Y+NH EQ QLSR P P++ + + + Sbjct: 187 LLTHMFAQQAGLEVGDFIWTGGDCHIYSNHTEQVTEQLSREPYPFPRLEL-AKAPSMFEY 245 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 ++D ++ Y H I A V+V Sbjct: 246 SFDDISVTDYRHHPTIKAPVAV 267 >gi|162447551|ref|YP_001620683.1| thymidylate synthase [Acholeplasma laidlawii PG-8A] gi|189036925|sp|A9NG27|TYSY_ACHLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|161985658|gb|ABX81307.1| thymidylate synthase [Acholeplasma laidlawii PG-8A] Length = 288 Score = 311 bits (798), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 152/293 (51%), Positives = 196/293 (66%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL RH+++ G+ + DRTG GT+S FGYQM FDL GFPLLTTKK K ++HELL Sbjct: 1 MKQYLDLARHIMENGTLKSDRTGTGTKSIFGYQMFFDLKDGFPLLTTKKTFLKGIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIW-----------------------------DEWADKDGELG 91 WF++GD+N+ YL + V IW DE+A K G+LG Sbjct: 61 WFIKGDTNIKYLVDNNVGIWTDWPYKNYMNSSEYQGESIKEFSDKIRQSDEFAKKWGDLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ N +DQI I+ +L+ +P SRR ++SAWN A I +M LPPCH L Q Sbjct: 121 PVYGSQWRNF-----NGVDQIEYIINTLKTNPDSRRMVLSAWNPAEIGQMMLPPCHTLIQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV + KLS QLYQRSGDVFLGIPFNIASY++ MM+A V GF+ G F+HT+GD H+Y N Sbjct: 176 FYVVDNKLSLQLYQRSGDVFLGIPFNIASYAVFLMMVAQVTGFELGSFVHTIGDAHIYTN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 HF+Q +LQL+R+PR LP + IN +I L F+YEDF L Y+P+ I V+V Sbjct: 236 HFDQINLQLTRTPRRLPILKINKSITRLEDFKYEDFELVGYDPYPPIKGVVAV 288 >gi|311693477|gb|ADP96350.1| thymidylate synthase [marine bacterium HP15] Length = 279 Score = 311 bits (797), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 147/279 (52%), Positives = 191/279 (68%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ V+ G D+ DRTGVGTRS FG Q+RF+L +GFPL+TTKKVH +S+++ELL Sbjct: 1 MKAYLDLMQDVVDNGFDKGDRTGVGTRSVFGRQIRFNLQEGFPLVTTKKVHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG ++ ++L VSIW+EWA ++G+LGPIYG QWRSW +G V+DQIS +++ +R Sbjct: 61 WFLRGSTDNTWLQERKVSIWNEWALENGDLGPIYGKQWRSWQCPNGEVVDQISEVIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWN A + +MAL PCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 TKPNSRRLIVSAWNPAELPDESIGPQDNVREGRMALAPCHCLFQFYVVDGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225 D+FLG+PFNIASY+LLT M+A GEF+HT GD HLY NH + QL R PR Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYQNHLTDDIVFEQLKREPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP ++I + + EDF Y+P+ I A +++ Sbjct: 241 ALPTLVIKRKPASIFEYELEDFDFEGYDPYPGIKAPIAI 279 >gi|56708291|ref|YP_170187.1| thymidylate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670762|ref|YP_667319.1| thymidylate synthase [Francisella tularensis subsp. tularensis FSC198] gi|224457413|ref|ZP_03665886.1| thymidylate synthase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370775|ref|ZP_04986780.1| thymidylate synthase [Francisella tularensis subsp. tularensis FSC033] gi|254875112|ref|ZP_05247822.1| thymidylate synthase [Francisella tularensis subsp. tularensis MA00-2987] gi|62901196|sp|Q5NFK5|TYSY_FRATT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123063432|sp|Q14H07|TYSY_FRAT1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54113189|gb|AAV29228.1| NT02FT1259 [synthetic construct] gi|56604783|emb|CAG45862.1| thymidylate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321095|emb|CAL09245.1| thymidylate synthase [Francisella tularensis subsp. tularensis FSC198] gi|151569018|gb|EDN34672.1| thymidylate synthase [Francisella tularensis subsp. tularensis FSC033] gi|254841111|gb|EET19547.1| thymidylate synthase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159521|gb|ADA78912.1| thymidylate synthase [Francisella tularensis subsp. tularensis NE061598] Length = 274 Score = 311 bits (796), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 151/277 (54%), Positives = 187/277 (67%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ + G + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H SVVHELL Sbjct: 1 MQEYLNFLKYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL+ + V IW+EWA DGELGPIYG QWR D++G IDQI+ ++Q L+ Sbjct: 61 WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWR---DFNGQGIDQIADVIQMLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN ++ ALPPCH +FQFYV N KLSC L QRS Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTNMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF +Y H AI AK+SV Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274 >gi|16801054|ref|NP_471322.1| thymidylate synthase [Listeria innocua Clip11262] gi|22096226|sp|Q92AD4|TYSY_LISIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|16414489|emb|CAC97218.1| lin1988 [Listeria innocua Clip11262] Length = 314 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|152975426|ref|YP_001374943.1| thymidylate synthase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189036926|sp|A7GP90|TYSY_BACCN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|152024178|gb|ABS21948.1| Thymidylate synthase [Bacillus cytotoxicus NVH 391-98] Length = 318 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 193/313 (61%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL +H +IW+EWA K+ Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKNWVESDEYKGPDMTNFGLRSQEDEAFKTQYDEQME 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR+W G IDQ+ +++ ++ P SRR IVS Sbjct: 126 IFKKNVLEDDEFARKYGYLGDVYGKQWRAWKTAAGETIDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G GEF+HT+GD H+Y NHFEQ QL+R PR P + +N ++ + F D T+ Sbjct: 246 CGLAVGEFVHTIGDAHIYTNHFEQVKKQLAREPRPFPTLKLNSDVKSVFDFEMGDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|313623197|gb|EFR93452.1| thymidylate synthase [Listeria innocua FSL J1-023] Length = 314 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|332312316|gb|EGJ25411.1| Thymidylate synthase [Listeria monocytogenes str. Scott A] Length = 317 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 4 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 64 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 123 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 124 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 183 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 243 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 244 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 303 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 304 GYNPDPAIKAPISV 317 >gi|313618225|gb|EFR90295.1| thymidylate synthase [Listeria innocua FSL S4-378] Length = 314 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKARILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|257453633|ref|ZP_05618923.1| thymidylate synthase [Enhydrobacter aerosaccus SK60] gi|257449091|gb|EEV24044.1| thymidylate synthase [Enhydrobacter aerosaccus SK60] Length = 286 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 151/277 (54%), Positives = 195/277 (70%), Gaps = 16/277 (5%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ V+ G + DRTG GT S FG QMRFDL +GFPLLTTKK+H KSV++ELLWFL Sbjct: 10 YLDLLKLVLDNGIQKGDRTGTGTISYFGAQMRFDLQEGFPLLTTKKIHTKSVIYELLWFL 69 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DYDGN 107 +GD++V YL +GV IW+EWA + GELG +YG QWR++ Y + Sbjct: 70 KGDTHVQYLQDNGVRIWNEWATAEQTARFGKPEGELGAVYGHQWRNFGASKKADGSYHSD 129 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 DQIS +V ++ +P SRR IVS WN +++ALPPCH LFQF+V +GKLSCQLYQRS Sbjct: 130 GFDQISWVVNEIKNNPNSRRLIVSGWNPLEANEVALPPCHTLFQFFVADGKLSCQLYQRS 189 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLT M+A V G GEF+ T GD H+YNNH +Q D QLSR P L Sbjct: 190 ADLFLGVPFNIASYALLTHMIAHVTGLGVGEFVWTGGDCHIYNNHLQQVDEQLSREPFAL 249 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ +NP+I D+ +F + D + +Y+ HA I A+VSV Sbjct: 250 PKLWLNPDITDIFAFDFNDIKIENYQSHATIKAEVSV 286 >gi|46908107|ref|YP_014496.1| thymidylate synthase [Listeria monocytogenes serotype 4b str. F2365] gi|47093257|ref|ZP_00231029.1| thymidylate synthase [Listeria monocytogenes str. 4b H7858] gi|254826083|ref|ZP_05231084.1| thymidylate synthase [Listeria monocytogenes FSL J1-194] gi|254852778|ref|ZP_05242126.1| thymidylate synthase [Listeria monocytogenes FSL R2-503] gi|254931955|ref|ZP_05265314.1| thymidylate synthase [Listeria monocytogenes HPB2262] gi|254992225|ref|ZP_05274415.1| thymidylate synthase [Listeria monocytogenes FSL J2-064] gi|255521581|ref|ZP_05388818.1| thymidylate synthase [Listeria monocytogenes FSL J1-175] gi|300763815|ref|ZP_07073812.1| thymidylate synthase [Listeria monocytogenes FSL N1-017] gi|62901328|sp|Q71YE1|TYSY_LISMF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|46881377|gb|AAT04673.1| thymidylate synthase [Listeria monocytogenes serotype 4b str. F2365] gi|47018389|gb|EAL09150.1| thymidylate synthase [Listeria monocytogenes str. 4b H7858] gi|258606105|gb|EEW18713.1| thymidylate synthase [Listeria monocytogenes FSL R2-503] gi|293583507|gb|EFF95539.1| thymidylate synthase [Listeria monocytogenes HPB2262] gi|293595324|gb|EFG03085.1| thymidylate synthase [Listeria monocytogenes FSL J1-194] gi|300515551|gb|EFK42601.1| thymidylate synthase [Listeria monocytogenes FSL N1-017] gi|328466226|gb|EGF37383.1| thymidylate synthase [Listeria monocytogenes 1816] gi|328473593|gb|EGF44430.1| thymidylate synthase [Listeria monocytogenes 220] Length = 314 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|217963973|ref|YP_002349651.1| thymidylate synthase [Listeria monocytogenes HCC23] gi|254790241|sp|B8DDM8|TYSY_LISMH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|217333243|gb|ACK39037.1| thymidylate synthase [Listeria monocytogenes HCC23] gi|307571457|emb|CAR84636.1| thyA [Listeria monocytogenes L99] Length = 314 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|226224478|ref|YP_002758585.1| thymidylate synthase [Listeria monocytogenes Clip81459] gi|259550791|sp|C1KWH4|TYSY_LISMC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|225876940|emb|CAS05649.1| Putative thymidylate synthase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 314 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPKDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|84687905|ref|ZP_01015772.1| thymidylate synthase [Maritimibacter alkaliphilus HTCC2654] gi|84664099|gb|EAQ10596.1| thymidylate synthase [Rhodobacterales bacterium HTCC2654] Length = 272 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 146/272 (53%), Positives = 193/272 (70%), Gaps = 8/272 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L+ V+ G DRTG GT S FG Q R+ L++GFPL+TTKK+H +S+VHELL Sbjct: 1 MRQYLDALKTVLDQGVPSTDRTGTGTTSYFGMQCRYPLAEGFPLVTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV--------IDQI 112 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P D +DQI Sbjct: 61 WFLSGDTNIGYLKENGVSIWDEWADENGDLGPVYGHQWRHFPKIDRGADGAPVIGEVDQI 120 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 + +V+ +R P SRR IVSAWN + MALPPCH L+Q + GKL QLYQRS D+FL Sbjct: 121 ADLVEQIRRSPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRIIGGKLHLQLYQRSADMFL 180 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G+PFNIASY+LL +MLA V G++ G+F+H++GD H+Y+NH +Q QLSR+PR LPQ+ I Sbjct: 181 GVPFNIASYALLQVMLAHVTGYEPGDFVHSIGDAHIYSNHMDQVHEQLSRTPRPLPQIEI 240 Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ + F+Y+DF Y+P AI A V+V Sbjct: 241 KRHVGSIFDFKYDDFAFPGYDPAPAIKAPVAV 272 >gi|118497833|ref|YP_898883.1| thymidylate synthase [Francisella tularensis subsp. novicida U112] gi|134301752|ref|YP_001121720.1| thymidylate synthase [Francisella tularensis subsp. tularensis WY96-3418] gi|187931486|ref|YP_001891470.1| thymidylate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|194323806|ref|ZP_03057582.1| thymidylate synthase [Francisella tularensis subsp. novicida FTE] gi|208779897|ref|ZP_03247241.1| thymidylate synthase [Francisella novicida FTG] gi|254373190|ref|ZP_04988679.1| thymidylate synthase [Francisella tularensis subsp. novicida GA99-3549] gi|254374644|ref|ZP_04990125.1| thymidylate synthase [Francisella novicida GA99-3548] gi|166231701|sp|A0Q7B4|TYSY_FRATN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231702|sp|A4IXE8|TYSY_FRATW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|118423739|gb|ABK90129.1| thymidylate synthase [Francisella novicida U112] gi|134049529|gb|ABO46600.1| thymidylate synthase [Francisella tularensis subsp. tularensis WY96-3418] gi|151570917|gb|EDN36571.1| thymidylate synthase [Francisella novicida GA99-3549] gi|151572363|gb|EDN38017.1| thymidylate synthase [Francisella novicida GA99-3548] gi|187712395|gb|ACD30692.1| thymidylate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|194322170|gb|EDX19652.1| thymidylate synthase [Francisella tularensis subsp. novicida FTE] gi|208744352|gb|EDZ90652.1| thymidylate synthase [Francisella novicida FTG] gi|332678547|gb|AEE87676.1| Thymidylate synthase [Francisella cf. novicida Fx1] Length = 274 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 151/277 (54%), Positives = 187/277 (67%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ + G + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLKYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL+ + V IW+EWA DGELGPIYG QWR D++G IDQI+ ++Q L+ Sbjct: 61 WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWR---DFNGQGIDQIADVIQMLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN ++ ALPPCH +FQFYV N KLSC L QRS Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF +Y H AI AK+SV Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274 >gi|126665225|ref|ZP_01736208.1| Thymidylate synthase [Marinobacter sp. ELB17] gi|126630595|gb|EBA01210.1| Thymidylate synthase [Marinobacter sp. ELB17] Length = 279 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 146/279 (52%), Positives = 193/279 (69%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ GS+R DRTGVGTRS FG Q+RF+L +GFPL+TTKK+H +S++ ELL Sbjct: 1 MRAYLDLMQDIVDNGSNRGDRTGVGTRSVFGRQVRFNLQQGFPLVTTKKIHLRSIIQELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G ++ ++L V+IW+EWA +G+LGPIYG QWRSW DG VIDQIS ++ +R Sbjct: 61 WFLQGSTDNNWLTERKVNIWNEWALDNGDLGPIYGKQWRSWQCQDGRVIDQISDLIDQIR 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWN A + +MAL PCHCLFQFYV++GKLSCQLYQRS Sbjct: 121 QKPNSRRLIVSAWNPAELPDESIGPQDNVRQGRMALAPCHCLFQFYVNDGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225 D+FLG+PFNIASY+LLT M+A GEF+HT GD HLY+NH + QL R PR Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYSNHLTDDIVFEQLKREPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP+++I + + +DF + YEP+ I A +++ Sbjct: 241 ALPKLVIKRKPNSIFEYNLDDFAFKGYEPYPGIKAPIAI 279 >gi|320094077|ref|ZP_08025892.1| thymidylate synthase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978968|gb|EFW10496.1| thymidylate synthase [Actinomyces sp. oral taxon 178 str. F0338] Length = 265 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 148/262 (56%), Positives = 186/262 (70%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL V+ G + DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KSVV ELLWF Sbjct: 5 QYEDLLARVMAEGVAKGDRTGTGTRSVFGAQLRYDLSRGFPLITTKRVHLKSVVGELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G SNV +L HG+ IW+EWAD+ GELGP+YGVQWRSW G IDQIS+++++LR D Sbjct: 65 LSGSSNVGWLQEHGIRIWNEWADEGGELGPVYGVQWRSWNAGGGTRIDQISNVLETLRTD 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNV + +MAL PCH FQ Y +G+LS QLYQRS D+FLG+PFNIASYS Sbjct: 125 PDSRRMVVSAWNVGDLPQMALEPCHAFFQLYAAHGRLSLQLYQRSADLFLGVPFNIASYS 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M A G Q G+FI T GD H+Y+NH EQ QLSR P P++ + + + Sbjct: 185 LLTHMFAQQAGLQVGDFIWTGGDCHIYSNHTEQVAEQLSREPYPFPRLEL-AKAPSMFDY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 ++D ++ Y+ H I A V+V Sbjct: 244 SFDDVSVEGYQHHPTIKAPVAV 265 >gi|308235845|ref|ZP_07666582.1| thymidylate synthase [Gardnerella vaginalis ATCC 14018] gi|311114431|ref|YP_003985652.1| thymidylate synthase [Gardnerella vaginalis ATCC 14019] gi|310945925|gb|ADP38629.1| thymidylate synthase [Gardnerella vaginalis ATCC 14019] Length = 290 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 150/265 (56%), Positives = 191/265 (72%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG Q+RFDLSK FPL+TTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILMEGTLKSDRTGTGTISLFGQQIRFDLSKSFPLITTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L +GV IWDEWAD++G+LGP+YGVQWRSWP + IDQI+++++ + Sbjct: 87 KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTQENPNRTIDQIANVMELI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNHPDSRRMIVSAWNPAEVENMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P PQ+ I + Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEIR-KADSI 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 S+ Y DF + Y+ H I A V+V Sbjct: 266 FSYDYSDFKVVDYKHHPTIKAPVAV 290 >gi|148654128|ref|YP_001281221.1| thymidylate synthase [Psychrobacter sp. PRwf-1] gi|172048593|sp|A5WHY0|TYSY_PSYWF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148573212|gb|ABQ95271.1| thymidylate synthase [Psychrobacter sp. PRwf-1] Length = 286 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 148/277 (53%), Positives = 194/277 (70%), Gaps = 16/277 (5%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL+R+V G+++ DRTG GTRS FG Q+RFDL GFPLLTTKKVH KS+ +EL WFL Sbjct: 10 YLDLIRYVRDHGTEKGDRTGTGTRSHFGAQLRFDLKDGFPLLTTKKVHMKSITYELFWFL 69 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPD-------YDGN 107 +GD++V YL HGV IW+EW+ + GELGPIYG QWR++ Y+ + Sbjct: 70 KGDTHVKYLQDHGVRIWNEWSTAEQTARFGRPEGELGPIYGHQWRNYGATKAEDGRYNQD 129 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQ+ +++ ++++P SRR IVS WN A ++ALPPCH LFQF+V +GKLSCQLYQRS Sbjct: 130 GVDQVVEVIEQIKSNPNSRRLIVSGWNPAEATQVALPPCHTLFQFFVADGKLSCQLYQRS 189 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASYSLLT M+A V + GEFI T GD HLY NH +Q + QLSR L Sbjct: 190 ADLFLGVPFNIASYSLLTHMIAQVCDLEVGEFIWTGGDCHLYQNHIDQVNEQLSREAYEL 249 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ +NP I D+ F ++D + Y+ H AI A V+V Sbjct: 250 PKLWLNPEIKDIFDFTFDDIRVEGYQSHPAIKAPVAV 286 >gi|315282890|ref|ZP_07871198.1| thymidylate synthase [Listeria marthii FSL S4-120] gi|313613464|gb|EFR87300.1| thymidylate synthase [Listeria marthii FSL S4-120] Length = 314 Score = 309 bits (792), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAESDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 AQFKKRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|291457285|ref|ZP_06596675.1| thymidylate synthase [Bifidobacterium breve DSM 20213] gi|291381120|gb|EFE88638.1| thymidylate synthase [Bifidobacterium breve DSM 20213] Length = 290 Score = 309 bits (792), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 151/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +L+R ++ G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL Sbjct: 27 YENLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSQYFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP + IDQIS+++ + Sbjct: 87 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR +VSAWN A ++KMALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNHPDSRRMVVSAWNPAEVEKMALPPCHALFQFYVANGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QLSR P P + I L Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHVYDNHVDQFLEQLSRDPYPYPTIEIR-KADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDFT+ Y+ H I A V+V Sbjct: 266 FDYQYEDFTIVGYQHHPTIKAPVAV 290 >gi|116873310|ref|YP_850091.1| thymidylate synthase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123463950|sp|A0AJY0|TYSY_LISW6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116742188|emb|CAK21312.1| thymidylate synthase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 314 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EQFKTRILEDEGFANKYGELGNIYGKQWREWKTSQGETIDQLADVIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPTTIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYHPDPAIKAPISV 314 >gi|313608068|gb|EFR84144.1| thymidylate synthase [Listeria monocytogenes FSL F2-208] Length = 317 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 4 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 64 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 123 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 124 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 183 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 243 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 244 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 303 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 304 GYNPDPAIKAPISV 317 >gi|254831525|ref|ZP_05236180.1| thymidylate synthase [Listeria monocytogenes 10403S] Length = 314 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P +I A +SV Sbjct: 301 GYNPDPSIKAPISV 314 >gi|47096916|ref|ZP_00234494.1| thymidylate synthase [Listeria monocytogenes str. 1/2a F6854] gi|224500227|ref|ZP_03668576.1| thymidylate synthase [Listeria monocytogenes Finland 1988] gi|254827241|ref|ZP_05231928.1| thymidylate synthase [Listeria monocytogenes FSL N3-165] gi|254899429|ref|ZP_05259353.1| thymidylate synthase [Listeria monocytogenes J0161] gi|254912432|ref|ZP_05262444.1| thymidylate synthase [Listeria monocytogenes J2818] gi|254936759|ref|ZP_05268456.1| thymidylate synthase [Listeria monocytogenes F6900] gi|47014729|gb|EAL05684.1| thymidylate synthase [Listeria monocytogenes str. 1/2a F6854] gi|258599624|gb|EEW12949.1| thymidylate synthase [Listeria monocytogenes FSL N3-165] gi|258609355|gb|EEW21963.1| thymidylate synthase [Listeria monocytogenes F6900] gi|293590413|gb|EFF98747.1| thymidylate synthase [Listeria monocytogenes J2818] Length = 314 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRIIEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P +I A +SV Sbjct: 301 GYNPDPSIKAPISV 314 >gi|290892999|ref|ZP_06555988.1| thymidylate synthase [Listeria monocytogenes FSL J2-071] gi|290557359|gb|EFD90884.1| thymidylate synthase [Listeria monocytogenes FSL J2-071] Length = 314 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDDAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVTDISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|284802320|ref|YP_003414185.1| thymidylate synthase [Listeria monocytogenes 08-5578] gi|284995462|ref|YP_003417230.1| thymidylate synthase [Listeria monocytogenes 08-5923] gi|284057882|gb|ADB68823.1| thymidylate synthase [Listeria monocytogenes 08-5578] gi|284060929|gb|ADB71868.1| thymidylate synthase [Listeria monocytogenes 08-5923] Length = 314 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRVERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P +I A +SV Sbjct: 301 GYNPDPSIKAPISV 314 >gi|227494604|ref|ZP_03924920.1| thymidylate synthase [Actinomyces coleocanis DSM 15436] gi|226832338|gb|EEH64721.1| thymidylate synthase [Actinomyces coleocanis DSM 15436] Length = 267 Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 145/261 (55%), Positives = 190/261 (72%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GT S FG Q+R+DLS+GFPL+TTK+VH KSVV EL+WFL Sbjct: 8 YEDLLREVLETGAVKEDRTGTGTVSVFGRQLRYDLSQGFPLITTKRVHLKSVVGELIWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 G SNV +L +G+ IW+EWAD++G+LGP+YGVQWRSWP DG IDQ++ I++++R++P Sbjct: 68 NGSSNVKWLQDNGIRIWNEWADENGDLGPVYGVQWRSWPTPDGEHIDQLTQILETVRSNP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNVA +DKMAL PCH FQ YV +GKLS Q+YQRS D+FLG+PFNIASY+L Sbjct: 128 DSRRMLVSAWNVAELDKMALAPCHSFFQLYVVDGKLSLQIYQRSADLFLGVPFNIASYAL 187 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A Q G+ + T GD H+Y+NHFEQ QLSR P + + L ++ Sbjct: 188 LTHMIAQQCDLQVGDLVWTGGDCHIYSNHFEQVQEQLSRKAYPFPTLELR-KAESLFDYQ 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ED + Y+ H I A V+V Sbjct: 247 IEDVAVHDYQHHPTIKAPVAV 267 >gi|110004417|emb|CAK98755.1| putative thymidylate synthase transmembrane protein [Spiroplasma citri] Length = 298 Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 146/294 (49%), Positives = 197/294 (67%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL + R +++ G ++ DRT GT S FGYQMRF+LS+GFP+LTTKK+H+KS+V+ELL Sbjct: 10 MEQYLKMARFILEHGQEKDDRTNTGTISYFGYQMRFNLSEGFPILTTKKIHFKSIVYELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91 WF++GD+N+ YL H V IW+EW K+ G+LG Sbjct: 70 WFIKGDTNIKYLVDHDVRIWNEWPYKNYQASSKYNNETLAEFVEKIKTDANFAAEFGDLG 129 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ N +DQ++ ++++L+ +PYSRRHI+SAWN A +D+MALPPCH L Q Sbjct: 130 PVYGKQWRNF-----NGVDQLAKLLENLKKNPYSRRHIISAWNPAEVDEMALPPCHTLIQ 184 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FYV + KLSCQLYQRS DVFLG+PFNIASY+LLT ++A V+G G+F+HTLGD H+Y Sbjct: 185 FYVSKDNKLSCQLYQRSADVFLGVPFNIASYALLTHLIAQVVGLDAGDFVHTLGDCHIYK 244 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH Q QL RS LP + +N I L F++ED L +Y+P I V+V Sbjct: 245 NHLSQIKEQLRRSLGKLPTLKLNQTISSLFDFKFEDIMLENYDPAPLIKGTVAV 298 >gi|315303800|ref|ZP_07874296.1| thymidylate synthase [Listeria ivanovii FSL F6-596] gi|313627829|gb|EFR96466.1| thymidylate synthase [Listeria ivanovii FSL F6-596] Length = 314 Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQAGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------DKD----------- 87 WFL GD+N+ YL +H +IW+EWA +KD Sbjct: 61 WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSSDYTGEDMTDFGLRAEKDPAFKEVYQTEM 120 Query: 88 -----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKARILEEEEFASKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QL+R+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLTRTPHALPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P +AI A +SV Sbjct: 301 GYNPDSAIKAPISV 314 >gi|255027643|ref|ZP_05299629.1| thymidylate synthase [Listeria monocytogenes FSL J2-003] Length = 314 Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRIIEDEAFATKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|254369108|ref|ZP_04985120.1| hypothetical protein FTAG_00039 [Francisella tularensis subsp. holarctica FSC022] gi|157122058|gb|EDO66198.1| hypothetical protein FTAG_00039 [Francisella tularensis subsp. holarctica FSC022] Length = 274 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 150/277 (54%), Positives = 186/277 (67%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ + G + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLKYIKENGVLKNDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL+ + V IW+EWA DGELGPIYG QWR D++G IDQI+ ++Q L+ Sbjct: 61 WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWR---DFNGQGIDQIADVIQMLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +V AWN ++ ALPPCH +FQFYV N KLSC L QRS Sbjct: 118 TNPNSRRILVLAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF +Y H AI AK+SV Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274 >gi|16803914|ref|NP_465399.1| thymidylate synthase [Listeria monocytogenes EGD-e] gi|224501326|ref|ZP_03669633.1| thymidylate synthase [Listeria monocytogenes FSL R2-561] gi|22096224|sp|Q8Y626|TYSY_LISMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|16411328|emb|CAC99952.1| lmo1874 [Listeria monocytogenes EGD-e] Length = 314 Score = 308 bits (789), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 151/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRIIEDEAFATKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P +I A +SV Sbjct: 301 GYNPDPSIKAPISV 314 >gi|332184365|gb|AEE26619.1| Thymidylate synthase [Francisella cf. novicida 3523] Length = 274 Score = 308 bits (789), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 150/277 (54%), Positives = 187/277 (67%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L ++ + G + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLNYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL+ + V IW+EWA DGELGPIYG QWR D++G IDQI+ ++Q L+ Sbjct: 61 WFLSGSTNIKYLNDNNVRIWNEWATSDGELGPIYGKQWR---DFNGQGIDQIADVIQMLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN ++ ALPPCH +FQFYV N +LSC L QRS Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNRLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I + ++YEDF +Y H AI AK+SV Sbjct: 238 PKLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274 >gi|310287943|ref|YP_003939202.1| Thymidylate synthase [Bifidobacterium bifidum S17] gi|309251880|gb|ADO53628.1| Thymidylate synthase [Bifidobacterium bifidum S17] Length = 311 Score = 308 bits (788), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 149/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL Sbjct: 48 YEDLVRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFL 107 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L H V IWD+WAD++G+LGP+YGVQWRSWP + IDQI +++ + Sbjct: 108 KGSSNVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIGNVLDLI 167 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIA Sbjct: 168 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIA 227 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QLSR P P++ I L Sbjct: 228 SYSLLTMMIAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEIR-KADSL 286 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDFT+ Y H I A V+V Sbjct: 287 FDYQYEDFTIVDYRHHPTIKAPVAV 311 >gi|241765073|ref|ZP_04763065.1| Thymidylate synthase [Acidovorax delafieldii 2AN] gi|241365310|gb|EER60132.1| Thymidylate synthase [Acidovorax delafieldii 2AN] Length = 286 Score = 307 bits (787), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 153/273 (56%), Positives = 188/273 (68%), Gaps = 11/273 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DL+RHV G D+ DRTG GT+S FG+QMRFDL +GFPL+TTKKVH KS++ ELLWF Sbjct: 14 QYEDLMRHVFTHGVDKGDRTGTGTKSVFGHQMRFDLREGFPLVTTKKVHLKSIIVELLWF 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW----PDYDGNVIDQISSIVQS 118 L G S+ +L GV+IWDEWA KDG+LGP+YGVQWRSW P+ IDQI ++ + Sbjct: 74 LTGSSSNLWLKERGVTIWDEWARKDGDLGPVYGVQWRSWPAPTPENPRGHIDQIQQVIDT 133 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVF 171 L+ +P SRR IVSAWNVA +DKMAL PCH FQFYV G LSCQLYQRS D+F Sbjct: 134 LKTNPDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPAQEPGGRGTLSCQLYQRSADIF 193 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLT M+A G+FI T GD H+Y+NH EQ QL R+P P + Sbjct: 194 LGVPFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHHEQVRTQLERAPYPYPTLR 253 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I + ++YEDF + Y+ H AI A V+V Sbjct: 254 IKRRPDSIFDYQYEDFEVLDYQCHPAIKAPVAV 286 >gi|311064820|ref|YP_003971546.1| thymidylate synthase [Bifidobacterium bifidum PRL2010] gi|310867140|gb|ADP36509.1| ThyA Thymidylate synthase [Bifidobacterium bifidum PRL2010] Length = 290 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 149/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L H V IWD+WAD++G+LGP+YGVQWRSWP + IDQI +++ + Sbjct: 87 KGSSNVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIGNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIA Sbjct: 147 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QLSR P P++ I L Sbjct: 207 SYSLLTMMIAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEIR-KADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDFT+ Y H I A V+V Sbjct: 266 FDYQYEDFTIVDYRHHPTIKAPVAV 290 >gi|89256104|ref|YP_513466.1| thymidylate synthase [Francisella tularensis subsp. holarctica LVS] gi|115314578|ref|YP_763301.1| thymidylate synthase [Francisella tularensis subsp. holarctica OSU18] gi|156502122|ref|YP_001428187.1| thymidylate synthase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010790|ref|ZP_02275721.1| thymidylate synthase [Francisella tularensis subsp. holarctica FSC200] gi|254367429|ref|ZP_04983455.1| thymidylate synthase [Francisella tularensis subsp. holarctica 257] gi|290954512|ref|ZP_06559133.1| thymidylate synthase [Francisella tularensis subsp. holarctica URFT1] gi|295312028|ref|ZP_06802843.1| thymidylate synthase [Francisella tularensis subsp. holarctica URFT1] gi|122325397|sp|Q0BMM0|TYSY_FRATO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123401607|sp|Q2A486|TYSY_FRATH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231700|sp|A7NB78|TYSY_FRATF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|89143935|emb|CAJ79154.1| thymidylate synthase [Francisella tularensis subsp. holarctica LVS] gi|115129477|gb|ABI82664.1| thymidylate synthase [Francisella tularensis subsp. holarctica OSU18] gi|134253245|gb|EBA52339.1| thymidylate synthase [Francisella tularensis subsp. holarctica 257] gi|156252725|gb|ABU61231.1| thymidylate synthase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 274 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 149/277 (53%), Positives = 185/277 (66%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ + G + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLKYIKENGVLKNDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL+ + V IW+EWA DGELGPIYG QWR D++G IDQI+ ++Q L+ Sbjct: 61 WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWR---DFNGQGIDQIADVIQMLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +V AWN ++ ALPPCH +FQFYV N KLSC L QRS Sbjct: 118 TNPNSRRILVLAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GE I + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGELIWSGGDCHIYNNHIEQVNEQLSREPLAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF +Y H AI AK+SV Sbjct: 238 PTLKILRKSNSIFDYKYEDFEFENYNHHPAIKAKISV 274 >gi|283457486|ref|YP_003362064.1| thymidylate synthase [Rothia mucilaginosa DY-18] gi|283133479|dbj|BAI64244.1| thymidylate synthase [Rothia mucilaginosa DY-18] Length = 293 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 152/287 (52%), Positives = 191/287 (66%), Gaps = 28/287 (9%) Query: 4 YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 Y DLLR +++ D R DRTG GT FG QMRFDL + FPL+TTK+VH+KSV Sbjct: 9 YEDLLREILEENKDAIAADAQRSDRTGTGTFGVFGRQMRFDLRESFPLITTKRVHFKSVA 68 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 ELLWFLRG SNV +L GV+IWDEWAD++G+LGP+YGVQWRSWP DG IDQI+ ++ Sbjct: 69 IELLWFLRGSSNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 128 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVF 171 +SL+ +P SRRHIV+AWN A +D MALPPCH LFQFYV +LSCQLYQRS D+F Sbjct: 129 ESLKNNPSSRRHIVTAWNPAEVDSMALPPCHALFQFYVHERADGVKELSCQLYQRSADMF 188 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ-- 229 LG+PFNIASY+LLT ++A +G + GEFI T GD H+Y+NH EQ QL T P+ Sbjct: 189 LGVPFNIASYALLTYLIAQEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYG--TDPEGN 246 Query: 230 ------------MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++I + + YEDF L Y+ H I A ++V Sbjct: 247 PYPPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGIAAPIAV 293 >gi|315226195|ref|ZP_07867983.1| thymidylate synthase [Parascardovia denticolens DSM 10105] gi|315120327|gb|EFT83459.1| thymidylate synthase [Parascardovia denticolens DSM 10105] Length = 291 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 151/266 (56%), Positives = 193/266 (72%), Gaps = 6/266 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL R ++ GS + DRTG GT S FG QMRFDLS+ FPL+TTK V +K V +ELLWFL Sbjct: 27 YEDLAREILMTGSLKSDRTGTGTISLFGKQMRFDLSRSFPLITTKSVWFKGVSYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWP----DYDGNVIDQISSIVQS 118 +G SNV +L + V IWDEWAD + GELGP+YGVQWRSWP D IDQI++++Q Sbjct: 87 KGSSNVRWLQENKVHIWDEWADPETGELGPVYGVQWRSWPAPTKDDSHRTIDQIANVLQM 146 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 ++ +P SRR IVSAWN A +++MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNI Sbjct: 147 IKDNPDSRRMIVSAWNPAEVERMALPPCHALFQFYVADGRLSCQLYQRSADMFLGVPFNI 206 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 ASYSLLT M+A G + GEF+ T GD H+Y+NH +Q QLSR P PQ++++ Sbjct: 207 ASYSLLTCMMAQQTGLEPGEFVWTGGDCHIYDNHVDQFLEQLSRQPYPYPQLVMD-KADS 265 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 L ++YEDF + +Y+ A I A V+V Sbjct: 266 LFDYQYEDFHVLNYQHGAKIAAPVAV 291 >gi|294786608|ref|ZP_06751862.1| thymidylate synthase [Parascardovia denticolens F0305] gi|294485441|gb|EFG33075.1| thymidylate synthase [Parascardovia denticolens F0305] Length = 289 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 151/266 (56%), Positives = 193/266 (72%), Gaps = 6/266 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL R ++ GS + DRTG GT S FG QMRFDLS+ FPL+TTK V +K V +ELLWFL Sbjct: 25 YEDLAREILMTGSLKSDRTGTGTISLFGKQMRFDLSRSFPLITTKSVWFKGVSYELLWFL 84 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWP----DYDGNVIDQISSIVQS 118 +G SNV +L + V IWDEWAD + GELGP+YGVQWRSWP D IDQI++++Q Sbjct: 85 KGSSNVRWLQENKVHIWDEWADPETGELGPVYGVQWRSWPAPTKDDSHRTIDQIANVLQM 144 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 ++ +P SRR IVSAWN A +++MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNI Sbjct: 145 IKDNPDSRRMIVSAWNPAEVERMALPPCHALFQFYVADGRLSCQLYQRSADMFLGVPFNI 204 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 ASYSLLT M+A G + GEF+ T GD H+Y+NH +Q QLSR P PQ++++ Sbjct: 205 ASYSLLTCMMAQQTGLEPGEFVWTGGDCHIYDNHVDQFLEQLSRQPYPYPQLVMD-KADS 263 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 L ++YEDF + +Y+ A I A V+V Sbjct: 264 LFDYQYEDFHVLNYQHGAKIAAPVAV 289 >gi|300742119|ref|ZP_07072140.1| thymidylate synthase [Rothia dentocariosa M567] gi|300381304|gb|EFJ77866.1| thymidylate synthase [Rothia dentocariosa M567] Length = 302 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 149/281 (53%), Positives = 190/281 (67%), Gaps = 17/281 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 + + LD R I + R+DRTG GT FG QMRFDL FPL+TTK+VH+KSV ELL Sbjct: 22 LREILDENRDAIAADAQRKDRTGTGTFGVFGRQMRFDLRDSFPLITTKRVHFKSVAVELL 81 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG SN+ +L GV+IWDEWAD++G+LGP+YGVQWRSWP DG IDQI+ +++SL+ Sbjct: 82 WFLRGSSNIRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVIESLK 141 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVFLGIP 175 +P SRRHIVSAWN A +D+MALPPCH +FQFYV +LSCQLYQRS D+FLG+P Sbjct: 142 TNPSSRRHIVSAWNPAEVDEMALPPCHAMFQFYVHERPDGVKELSCQLYQRSADMFLGVP 201 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SRSPR-------- 225 FNIASY+LLT ++A +G + GEFI T GD H+Y+NH EQ QL P Sbjct: 202 FNIASYALLTYLIAHEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGNDPEGNPYPPRE 261 Query: 226 --TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+++I + + YEDF L Y+ H I A ++V Sbjct: 262 PYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGISAPIAV 302 >gi|227546560|ref|ZP_03976609.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212877|gb|EEI80756.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 290 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 151/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP + IDQIS+++ + Sbjct: 87 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QL R P P + I L Sbjct: 207 SYSLLTMMMAQQTGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEIR-KADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290 >gi|241668230|ref|ZP_04755808.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876765|ref|ZP_05249475.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842786|gb|EET21200.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 274 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 147/277 (53%), Positives = 190/277 (68%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ G+++ DRTG GT S FGYQMRFDL +GFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLKYIKDNGTNKGDRTGTGTTSIFGYQMRFDLQQGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +NV YL+ + V IW+EWA ++GELGPIYG QWR D++G IDQI+ +++ L+ Sbjct: 61 WFLSGSTNVKYLNDNKVRIWNEWATEEGELGPIYGKQWR---DFNGEGIDQIAEVIEMLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN ++ ALPPCH +FQFYV + KLSC L QRS Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVAKGNSALPPCHAMFQFYVADNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMIAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF ++Y+ H AI AK+SV Sbjct: 238 PTLKILRKPSSIFDYKYEDFEFQNYKHHPAIKAKISV 274 >gi|322689847|ref|YP_004209581.1| thymidylate synthase [Bifidobacterium longum subsp. infantis 157F] gi|320461183|dbj|BAJ71803.1| thymidylate synthase [Bifidobacterium longum subsp. infantis 157F] Length = 290 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 151/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP + IDQIS+++ + Sbjct: 87 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QL R P P + I L Sbjct: 207 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEIR-KADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290 >gi|323167835|gb|EFZ53526.1| thymidylate synthase [Shigella sonnei 53G] gi|323951715|gb|EGB47590.1| thymidylate synthase [Escherichia coli H252] Length = 231 Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 136/231 (58%), Positives = 177/231 (76%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 MRF+L GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+ Sbjct: 1 MRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60 Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG QWR+WP DG IDQI++++ L+ DP SRR IVSAWNV +DKMAL PCH FQFY Sbjct: 61 YGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V +GKLSCQLYQRS DVFLG+PFNIASY+LL M+A + G+F+ T GD HLY+NH Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHM 180 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Q LQLSR PR LP++II + +R+EDF + Y+PH I A V++ Sbjct: 181 DQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 231 >gi|322643701|gb|EFY40253.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|323226466|gb|EGA10674.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] Length = 231 Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 136/231 (58%), Positives = 177/231 (76%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+ Sbjct: 1 MRFNLQEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60 Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG QWR+WP DG IDQI++++ L+ DP SRR IVSAWNV +DKMAL PCH FQFY Sbjct: 61 YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V +GKLSCQLYQRS DVFLG+PFNIASY+LL M+A G+F+ T GD HLY+NH Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHM 180 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 EQ LQLSR PR LP+++I L +R++DF + Y+PH I A V++ Sbjct: 181 EQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 231 >gi|283782899|ref|YP_003373653.1| thymidylate synthase [Gardnerella vaginalis 409-05] gi|283441780|gb|ADB14246.1| thymidylate synthase [Gardnerella vaginalis 409-05] Length = 290 Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 148/265 (55%), Positives = 190/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R+++ G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL Sbjct: 27 YEDLVRNILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L +GV IWDEWAD++G+LGP+YGVQWRSWP + IDQI++++ + Sbjct: 87 KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P PQ+ I + Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEIR-KADSI 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y+ H I A V+V Sbjct: 266 FDYDYSDFKVVEYKHHPTIKAPVAV 290 >gi|298253462|ref|ZP_06977254.1| thymidylate synthase [Gardnerella vaginalis 5-1] gi|297532857|gb|EFH71743.1| thymidylate synthase [Gardnerella vaginalis 5-1] Length = 290 Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 148/265 (55%), Positives = 189/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L +GV IWDEWAD++G+LGP+YGVQWRSWP + IDQI++++ + Sbjct: 87 KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P PQ+ I + Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEIR-KADSI 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y+ H I A V+V Sbjct: 266 FDYDYSDFKVVEYKHHPTIKAPVAV 290 >gi|326803555|ref|YP_004321373.1| thymidylate synthase [Aerococcus urinae ACS-120-V-Col10a] gi|326650675|gb|AEA00858.1| thymidylate synthase [Aerococcus urinae ACS-120-V-Col10a] Length = 313 Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 156/314 (49%), Positives = 195/314 (62%), Gaps = 51/314 (16%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ +++ G D+ DRTGVGTRS FGYQMRFDL +GFP+LTTKKV + + ELL Sbjct: 1 MKQYLDLLQTILEKGHDKSDRTGVGTRSIFGYQMRFDLREGFPILTTKKVAFGLIKSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFLRGD+N+ YL + IWDEWA Sbjct: 61 WFLRGDTNIRYLLENNNHIWDEWAFENWVNSEDYQGPDMTNFGLRAEKDPEFKAEYLKVK 120 Query: 85 ---------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 D+D GELG +YG QWR W DG IDQI++I++ LR +P SRR I+ Sbjct: 121 ADFCQKILNDEDFAKKYGELGNVYGKQWRDWETRDGGSIDQIANILEQLRNNPDSRRIIL 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH L QFYV++GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDVPNMALPPCHTLSQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + G+F+HT GDVH+YNNHF+Q QLSR P LPQ+ I + + +D L Sbjct: 241 EVGLEVGDFVHTFGDVHIYNNHFDQVKEQLSRQPGQLPQLEIKSD-KSMFDLEKDDIVLN 299 Query: 251 SYEPHAAILAKVSV 264 +Y P I A V+V Sbjct: 300 NYHPQTPIKAPVAV 313 >gi|255326790|ref|ZP_05367866.1| thymidylate synthase [Rothia mucilaginosa ATCC 25296] gi|255296007|gb|EET75348.1| thymidylate synthase [Rothia mucilaginosa ATCC 25296] Length = 293 Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 152/287 (52%), Positives = 190/287 (66%), Gaps = 28/287 (9%) Query: 4 YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 Y DLLR +++ D R DRTG GT FG QMRFDL + FPL+TTK+VH+KSV Sbjct: 9 YEDLLREILEENKDAIAADAQRSDRTGTGTFGVFGRQMRFDLRESFPLITTKRVHFKSVA 68 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 ELLWFLRG SNV +L GV+IWDEWAD++G+LGP+YGVQWRSWP DG IDQI+ ++ Sbjct: 69 IELLWFLRGSSNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 128 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVF 171 SL+ +P SRRHIVSAWN A +D MALPPCH LFQFYV +LSCQLYQRS D+F Sbjct: 129 DSLKNNPGSRRHIVSAWNPAEVDNMALPPCHALFQFYVHERADGVKELSCQLYQRSADMF 188 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ-- 229 LG+PFNIASY+LLT ++A +G + GEF+ T GD H+Y+NH EQ QL T P+ Sbjct: 189 LGVPFNIASYALLTYLIAQEVGMEPGEFVWTGGDCHIYSNHLEQVKKQLGYG--TDPEGN 246 Query: 230 ------------MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++I + + YEDF L Y+ H I A ++V Sbjct: 247 PYPPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGIAAPIAV 293 >gi|297242824|ref|ZP_06926762.1| thymidylate synthase [Gardnerella vaginalis AMD] gi|296889035|gb|EFH27769.1| thymidylate synthase [Gardnerella vaginalis AMD] Length = 290 Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 148/265 (55%), Positives = 189/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L +GV IWDEWAD++G+LGP+YGVQWRSWP + IDQI++++ + Sbjct: 87 KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P PQ+ I + Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEIR-KADSI 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y+ H I A V+V Sbjct: 266 FDYDYSDFKVVDYKHHPTIKAPVAV 290 >gi|212716385|ref|ZP_03324513.1| hypothetical protein BIFCAT_01304 [Bifidobacterium catenulatum DSM 16992] gi|212660638|gb|EEB21213.1| hypothetical protein BIFCAT_01304 [Bifidobacterium catenulatum DSM 16992] Length = 303 Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 149/265 (56%), Positives = 186/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL Sbjct: 40 YEDLVRRILTEGTLKSDRTGTGTISLFGQQMRFDLSEYFPLLTTKTVFFKGLAYELLWFL 99 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L H V IWDEWAD++G+LGP+YG QWRSWP D IDQIS+++ + Sbjct: 100 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLV 159 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 160 KNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 219 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G Q GEF+ T GD H+Y+NH +Q QLSR P P + IN L Sbjct: 220 SYSLLTLMIAQQAGLQPGEFVWTGGDCHVYDNHIDQVLEQLSRDPYPYPHIRIN-KAASL 278 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y H I A V+V Sbjct: 279 FDYDYSDFEIVDYRHHPTIKAPVAV 303 >gi|167627658|ref|YP_001678158.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189036935|sp|B0TYI1|TYSY_FRAP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|167597659|gb|ABZ87657.1| Thymidylate synthase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 274 Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 146/277 (52%), Positives = 189/277 (68%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ G+ + DRTG GT S FGYQMRFDL +GFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLKYIKDNGTKKGDRTGTGTTSIFGYQMRFDLQQGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +NV YL+ + V IW+EWA ++GELGPIYG QWR D++G IDQI+ +++ L+ Sbjct: 61 WFLSGSTNVKYLNDNKVRIWNEWATEEGELGPIYGKQWR---DFNGEGIDQIAEVIEMLK 117 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN ++ ALPPCH +FQFY+ + KLSC L QRS Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVAKGNSALPPCHAMFQFYIADNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMIAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF ++Y+ H AI AK+SV Sbjct: 238 PTLKILRKPSSIFDYKYEDFEFQNYKHHPAIKAKISV 274 >gi|313632688|gb|EFR99662.1| thymidylate synthase [Listeria seeligeri FSL N1-067] Length = 314 Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 150/314 (47%), Positives = 192/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 ESFKTRILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G GEF+HT+GD HLYNNH EQ QLSR+P LP++I++ + F D +L Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLILSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P A+I A +SV Sbjct: 301 GYNPDASIKAPISV 314 >gi|31544250|ref|NP_852828.1| thymidylate synthase [Mycoplasma gallisepticum str. R(low)] gi|33860236|sp|Q9XC19|TYSY_MYCGA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|31541094|gb|AAP56396.1| Thymidylate synthase [Mycoplasma gallisepticum str. R(low)] gi|284930289|gb|ADC30228.1| Thymidylate synthase [Mycoplasma gallisepticum str. R(high)] gi|284931056|gb|ADC30994.1| Thymidylate synthase [Mycoplasma gallisepticum str. F] Length = 289 Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 146/294 (49%), Positives = 194/294 (65%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V+ G ++DRT GT S FG Q R+DL +GFPLLTTKK+ WK++ HELL Sbjct: 1 MKTYLDLLEKVMTKGEVKKDRTNTGTISYFGTQSRYDLREGFPLLTTKKMAWKAICHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WFL+GD+N+ YL H V+IW+EW A + G+LG Sbjct: 61 WFLKGDTNIKYLVDHNVNIWNEWPYEAFKKSNDFKGESLQDFVEKIKTDNQFAQQYGKLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D N +DQI ++ ++ +P+SRR IVSAWN I +MALPPCH FQ Sbjct: 121 PVYGKQWR-----DFNGVDQIEWVINEIKTNPFSRRLIVSAWNPGEIKEMALPPCHSFFQ 175 Query: 152 FYVDNG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 F+V+ ++S QLYQRSGD+FLG+PFNIASYSLL +M+A V G + EFIHT+GD H+Y+ Sbjct: 176 FFVNEKYEISLQLYQRSGDLFLGVPFNIASYSLLLLMVAQVTGLKPAEFIHTIGDTHIYS 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH EQ +QL R P+ LP++ +NP+I ++ FR+ED +L +YE H I KV+V Sbjct: 236 NHLEQVKIQLQREPKKLPKVTLNPDIKNIFDFRFEDISLENYEHHDPIKGKVAV 289 >gi|213428469|ref|ZP_03361219.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 231 Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 136/231 (58%), Positives = 177/231 (76%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+ Sbjct: 1 MRFNLLEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60 Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG QWR+WP DG IDQI++++ L+ DP SRR IVSAWNV +DKMAL PCH FQFY Sbjct: 61 YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V +GKLSCQLYQRS DVFLG+PFNIASY+LL M+A G+F+ T GD HLY+NH Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHM 180 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 EQ LQLSR PR LP+++I L +R++DF + Y+PH I A V++ Sbjct: 181 EQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 231 >gi|311112042|ref|YP_003983264.1| thymidylate synthase [Rothia dentocariosa ATCC 17931] gi|310943536|gb|ADP39830.1| thymidylate synthase [Rothia dentocariosa ATCC 17931] Length = 302 Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 149/281 (53%), Positives = 189/281 (67%), Gaps = 17/281 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 + + LD R I + R DRTG GT FG QMRFDL FPL+TTK+VH+KSV ELL Sbjct: 22 LREILDENRDAIAADAQRADRTGTGTFGVFGRQMRFDLRDSFPLITTKRVHFKSVAVELL 81 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG SN+ +L GV+IWDEWAD++G+LGP+YGVQWRSWP DG IDQI+ +++SL+ Sbjct: 82 WFLRGSSNIRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVIESLK 141 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVFLGIP 175 +P SRRHIVSAWN A +D+MALPPCH +FQFYV +LSCQLYQRS D+FLG+P Sbjct: 142 TNPSSRRHIVSAWNPAEVDEMALPPCHAMFQFYVHERPDGVKELSCQLYQRSADMFLGVP 201 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SRSPR-------- 225 FNIASY+LLT ++A +G + GEFI T GD H+Y+NH EQ QL P Sbjct: 202 FNIASYALLTYLIAHEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGNDPEGNPYPPRE 261 Query: 226 --TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+++I + + YEDF L Y+ H I A ++V Sbjct: 262 PYPYPKLVIKTKKPSVFDYEYEDFELVDYKHHPGISAPIAV 302 >gi|289435221|ref|YP_003465093.1| hypothetical protein lse_1858 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171465|emb|CBH28009.1| thyA [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 314 Score = 304 bits (779), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 149/314 (47%), Positives = 192/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 ESFKIRILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G GEF+HT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P A+I A +SV Sbjct: 301 GYNPDASIKAPISV 314 >gi|294790621|ref|ZP_06755779.1| thymidylate synthase [Scardovia inopinata F0304] gi|294458518|gb|EFG26871.1| thymidylate synthase [Scardovia inopinata F0304] Length = 290 Score = 304 bits (779), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 148/265 (55%), Positives = 187/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R +++ GS + DRTG GT S FG QMRF+L FPLLTTK V ++ + +ELLWFL Sbjct: 27 YEDLVRLILETGSLKSDRTGTGTISLFGRQMRFNLEDSFPLLTTKTVFFRGIAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L + V IWDEWAD DG LGP+YGVQWRSWP D IDQIS+++ + Sbjct: 87 KGSSNVRWLQENRVHIWDEWADADGNLGPVYGVQWRSWPAPTADNPNRTIDQISTVLNLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNQPDSRRMIVSAWNPAEVENMALPPCHTLFQFYVADGKLSCQLYQRSADMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT M+A + GEF+ T GD H+Y+NH +Q QLSR P PQ+ I+ + Sbjct: 207 SYSLLTAMMAQQADLKPGEFVWTGGDCHIYDNHVDQVLEQLSRQPYPYPQLKID-KADTI 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + +Y+ H I A V+V Sbjct: 266 FDYKYEDFHILNYQHHPKITAPVAV 290 >gi|200003972|ref|YP_002221554.1| putatitve thymidylate synthase [Bacteroides phage B40-8] gi|198209669|gb|ACH81952.1| putatitve thymidylate synthase [Bacteroides phage B40-8] Length = 265 Score = 304 bits (779), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 144/265 (54%), Positives = 182/265 (68%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ + +G R DRTG GT S FG Q +DL GFPL+TTKKV K ++HELL Sbjct: 1 MKQYLDLLKETLNYGEKRSDRTGTGTISLFGLQRSYDLRDGFPLVTTKKVFTKGIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L+GD+N+ YL+ +GV IWD+WA G+LG IYG QWR W +DQI S++ ++ Sbjct: 61 WMLKGDTNIKYLNENGVHIWDDWAKPSGDLGRIYGKQWRDWRINSKMKVDQIDSVIDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIA 179 +P SRR IVSAWNV I MALPPCHC FQFYV ++G L +LYQRS D+FLG+PFNIA Sbjct: 121 FNPESRRLIVSAWNVGEIHMMALPPCHCFFQFYVSESGYLDLKLYQRSADLFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYS+L M A V G + FIHT+GD H+Y NH EQ QLSR P LP++ +NPN+ ++ Sbjct: 181 SYSILLSMAAQVCGLKPRRFIHTIGDGHIYLNHVEQVKEQLSREPFALPKLELNPNVRNI 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F+YED + Y H AI V+V Sbjct: 241 FDFKYEDIKIVDYNCHPAIKGDVAV 265 >gi|229818169|ref|ZP_04448451.1| hypothetical protein BIFANG_03464 [Bifidobacterium angulatum DSM 20098] gi|229784420|gb|EEP20534.1| hypothetical protein BIFANG_03464 [Bifidobacterium angulatum DSM 20098] Length = 266 Score = 304 bits (779), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 150/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R + G+ + DRTG GT S FG QMRFDL + FPLLTTK V +K + +ELLWFL Sbjct: 3 YEDLVRKIFAEGTLKSDRTGTGTISLFGQQMRFDLGEYFPLLTTKTVFFKGLAYELLWFL 62 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP---DYDGN-VIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP D N IDQIS+++ + Sbjct: 63 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPQDPNRTIDQISNVLDLI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 123 KNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G + GEF+ T GD H+Y+NH EQ QL R P PQ+ I+ L Sbjct: 183 SYSLLTLMMAQQAGLEPGEFVWTGGDCHIYDNHVEQFIEQLGREPYPYPQIQIDKE-PSL 241 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 242 FDYKYEDFHILGYQHHPTIKAPVAV 266 >gi|213692995|ref|YP_002323581.1| Thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524456|gb|ACJ53203.1| Thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459175|dbj|BAJ69796.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 290 Score = 304 bits (778), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 150/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP + IDQI +++ + Sbjct: 87 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIFNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QL R P P + I L Sbjct: 207 SYSLLTMMMAQQTGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEIR-KADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290 >gi|225350958|ref|ZP_03741981.1| hypothetical protein BIFPSEUDO_02537 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158414|gb|EEG71656.1| hypothetical protein BIFPSEUDO_02537 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 303 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 149/265 (56%), Positives = 186/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL Sbjct: 40 YEDLVRKILTEGTLKSDRTGTGTVSLFGQQMRFDLSEYFPLLTTKTVFFKGLAYELLWFL 99 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L V IWDEWAD++G+LGP+YG QWRSWP D IDQIS+++ + Sbjct: 100 KGSTNVRWLQERNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLV 159 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 160 ENHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 219 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G Q GEF+ T GD H+Y+NH +Q QLSR P PQ+ IN L Sbjct: 220 SYSLLTLMIAQQAGLQPGEFVWTGGDCHVYDNHIDQVLEQLSRDPYPYPQIRIN-KADSL 278 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y+ H I A V+V Sbjct: 279 FDYDYSDFEIVGYQHHPTIKAPVAV 303 >gi|329895892|ref|ZP_08271220.1| Thymidylate synthase [gamma proteobacterium IMCC3088] gi|328922110|gb|EGG29469.1| Thymidylate synthase [gamma proteobacterium IMCC3088] Length = 277 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 145/277 (52%), Positives = 185/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G D+ DRTG GTRS F Q R DLS+GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKVYLDLLRDIMAHGVDKSDRTGTGTRSVFARQFRHDLSEGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N ++L +GVSIWDEWA ++G+LGPIYG QWRSWP DG I+QI ++ L+ Sbjct: 61 WFLRGDTNTAWLRENGVSIWDEWATEEGDLGPIYGAQWRSWPTADGGAINQIDYVIDCLK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR + WNV + KMALPPCH L+QFYV NG+LS QLY RS Sbjct: 121 HKPDSRRILFHGWNVEYLPDETLSPQENVRQGKMALPPCHLLYQFYVANGRLSAQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+P+N+AS +LLT ML + GE I + GD H+Y+NHFEQ + QL R PR L Sbjct: 181 SDSFLGLPYNLASLALLTHMLCQQCELEPGEVIISTGDSHIYSNHFEQVETQLEREPRAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + + ++DF L YEPHA I V++ Sbjct: 241 PTLRIKRKPESIYDYCFDDFELVGYEPHAHIAGAVAI 277 >gi|126730946|ref|ZP_01746755.1| thymidylate synthase [Sagittula stellata E-37] gi|126708662|gb|EBA07719.1| thymidylate synthase [Sagittula stellata E-37] Length = 263 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 154/264 (58%), Positives = 195/264 (73%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD LR V+K G+D DRTG GTRS FG Q R+ L+ GFPL+TTKK+H +S+VHELL Sbjct: 1 MQQYLDALRTVLKEGTDTTDRTGTGTRSHFGLQCRYPLADGFPLVTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR WP G IDQI++++ +R Sbjct: 61 WFLSGDTNIGYLKDNGVSIWDEWADENGDLGPVYGHQWRHWPSRKGE-IDQIATLLDMIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A + MALPPCH L+Q + GKL QLYQRS D+FLG+PFNIAS Sbjct: 120 TAPDSRRLIVSAWNPADVPDMALPPCHTLWQVRIAGGKLHLQLYQRSADMFLGVPFNIAS 179 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G++ G+FIHT+GD H+Y+NH +Q LQLSR+PR LP + + DL Sbjct: 180 YALLQHMIAHVTGYEPGDFIHTMGDAHIYSNHMDQVALQLSRTPRPLPTLRFTREVTDLF 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRY+DF +Y+P I A V+V Sbjct: 240 DFRYDDFAFDNYDPAPGIKAPVAV 263 >gi|46190148|ref|ZP_00206347.1| COG0207: Thymidylate synthase [Bifidobacterium longum DJO10A] gi|189440651|ref|YP_001955732.1| thymidylate synthase [Bifidobacterium longum DJO10A] gi|296454779|ref|YP_003661923.1| Thymidylate synthase [Bifidobacterium longum subsp. longum JDM301] gi|312133956|ref|YP_004001295.1| thya [Bifidobacterium longum subsp. longum BBMN68] gi|317482133|ref|ZP_07941157.1| thymidylate synthase [Bifidobacterium sp. 12_1_47BFAA] gi|322691787|ref|YP_004221357.1| thymidylate synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|189429086|gb|ACD99234.1| Thymidylate synthase [Bifidobacterium longum DJO10A] gi|291516397|emb|CBK70013.1| thymidylate synthase [Bifidobacterium longum subsp. longum F8] gi|296184211|gb|ADH01093.1| Thymidylate synthase [Bifidobacterium longum subsp. longum JDM301] gi|311773253|gb|ADQ02741.1| ThyA [Bifidobacterium longum subsp. longum BBMN68] gi|316916492|gb|EFV37890.1| thymidylate synthase [Bifidobacterium sp. 12_1_47BFAA] gi|320456643|dbj|BAJ67265.1| thymidylate synthase [Bifidobacterium longum subsp. longum JCM 1217] Length = 290 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 150/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP + IDQIS+++ + Sbjct: 87 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++KMALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADDKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QL R P P + I L Sbjct: 207 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEIR-KADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290 >gi|197294226|ref|YP_001798767.1| thymidylate synthase [Candidatus Phytoplasma australiense] gi|171853553|emb|CAM11419.1| Thymidylate synthase [Candidatus Phytoplasma australiense] Length = 288 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 144/293 (49%), Positives = 195/293 (66%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL R ++K G ++ DRT GT+S FGYQMRF+L GFPLLTTKK+++K+++HELL Sbjct: 1 MKTYLDLCRFILKKGFNKEDRTKTGTKSVFGYQMRFNLQDGFPLLTTKKMYFKAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WFL+GD+N+SYL ++ V+IW++W A G LG Sbjct: 61 WFLKGDTNISYLVKNNVNIWNDWPYQKYQKSPHFKNETMEEFIQKIKKDKAFAGLHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D N DQI ++ ++ +P SRR I+S+WN + +M LPPCH L Q Sbjct: 121 PVYGKQWR-----DFNGFDQIKFLISEIKNNPDSRRLILSSWNPEQLHQMVLPPCHILMQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV GKLS QLYQRSGDVFLG+PFNIASY+LL +M+A V + GEFIHTLGD H+Y+N Sbjct: 176 FYVLEGKLSLQLYQRSGDVFLGVPFNIASYALLLLMVAQVTNLEVGEFIHTLGDAHIYHN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H Q +Q+ R+P+ LPQMI+NP+I D+ F +EDFTL++Y + +++ Sbjct: 236 HLNQIKIQIQRTPKKLPQMILNPHIKDIDGFSFEDFTLKNYFCDGTLKGDIAI 288 >gi|323490213|ref|ZP_08095431.1| thymidylate synthase [Planococcus donghaensis MPA1U2] gi|323396142|gb|EGA88970.1| thymidylate synthase [Planococcus donghaensis MPA1U2] Length = 314 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 144/314 (45%), Positives = 190/314 (60%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL H++ G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK ++ +V ELL Sbjct: 1 MKQYLDLCEHILHNGAKKEDRTGTGTLSVFGHQMRFDLTQGFPLMTTKKTAFRLIVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WF++GD+NV L + IWDEWA Sbjct: 61 WFIKGDTNVRALLQDNNHIWDEWAFAQWVESDEYTGPDMTDFGRRAQKDPEFAELYKQQM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K G+LGP+YG QWRSW +G IDQ+ ++++S++ +P SRRH+V Sbjct: 121 QIFQQKVMDNPVFASKYGDLGPVYGKQWRSWATTEGGTIDQLKNVIESIKKNPDSRRHLV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 +AWN ID MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 181 TAWNPEFIDDMALPPCHIMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 + G+F+HT GD HLY+NH Q QL+R P+ LP + IN + + D T+ Sbjct: 241 ECKLEVGDFVHTTGDTHLYSNHLSQVQEQLTREPKPLPTLHINEEVESIFDLTLADITIE 300 Query: 251 SYEPHAAILAKVSV 264 Y+PH I A V+V Sbjct: 301 GYDPHPRIKAPVAV 314 >gi|294155965|ref|YP_003560349.1| thymidylate synthase [Mycoplasma crocodyli MP145] gi|291599860|gb|ADE19356.1| thymidylate synthase [Mycoplasma crocodyli MP145] Length = 289 Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 151/294 (51%), Positives = 192/294 (65%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL+ V+ G RRDRTG GT FG Q R+DL KGFPLLTTKK+ WKS+V ELL Sbjct: 1 MTQYLKLLKTVLNTGMVRRDRTGTGTIGVFGTQTRYDLRKGFPLLTTKKMAWKSIVVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WFL+G++N+ YL V+IW+EW A K G LG Sbjct: 61 WFLKGETNIKYLVDRNVNIWNEWPYEIYKRSTDFQGETIEEFINKIKNDNEFAIKHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D++G +DQI ++ LR P+SRR +VSAWN +DKMALPPCH LFQ Sbjct: 121 PVYGRQWR---DFNG--VDQIKYVINELRTKPFSRRILVSAWNPEEVDKMALPPCHALFQ 175 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FYV N +LS QLYQRSGD+FLG+PFNIASY+LL M+A V + GEFIHT+GD H+Y+ Sbjct: 176 FYVSSNDELSLQLYQRSGDLFLGVPFNIASYALLLHMVAQVTNLRVGEFIHTIGDAHIYS 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH +Q QL+R P LP +I+N + ++ F +ED L+ Y+ H+ I A+VSV Sbjct: 236 NHVDQVTEQLTRRPFKLPTIILNKKVKEIFDFEFEDIELKDYKSHSRIKAEVSV 289 >gi|319935855|ref|ZP_08010281.1| thymidylate synthase [Coprobacillus sp. 29_1] gi|319809122|gb|EFW05603.1| thymidylate synthase [Coprobacillus sp. 29_1] Length = 295 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 144/298 (48%), Positives = 194/298 (65%), Gaps = 37/298 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L +H+++ G DR DRTG GTRS FGYQ R+DL +GFPLLTTKK+ + + ELL Sbjct: 1 MKQYLELCKHILENGEDRDDRTGTGTRSVFGYQTRYDLREGFPLLTTKKMFLRPIAEELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW---------------------------AD-----KDG 88 WF++GD+N+ YL V IW+EW AD K G Sbjct: 61 WFIKGDTNIKYLVDRNVRIWNEWPYEIFKKSEDFHGETLEEFVEKIKELSADDPFVIKYG 120 Query: 89 ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 ELGP+YG QWR +++ IDQ+S +V SL+ +PYSRRHI+ AWN A +D+MALPPCH Sbjct: 121 ELGPVYGRQWR---NFNNEGIDQVSKLVDSLKNNPYSRRHIICAWNPAEVDEMALPPCHS 177 Query: 149 LFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206 QFYV N + LSCQLYQRS D FLG+PFNIASY+L T MLA V G++ EFIHT+GD Sbjct: 178 FLQFYVSNDQKYLSCQLYQRSADTFLGVPFNIASYALFTAMLAQVCGYEAKEFIHTIGDA 237 Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H+Y +HF+ Q+SR P +L Q+++N ++ + F +D + +Y+ + ++ KVSV Sbjct: 238 HIYKDHFDVVKEQMSREPLSLCQLVLNKDVKSIFDFTIDDIKIENYQSYGKLVGKVSV 295 >gi|23466213|ref|NP_696816.1| thymidylate synthase [Bifidobacterium longum NCC2705] gi|239621560|ref|ZP_04664591.1| thymidylate synthase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|62901377|sp|Q8G3T9|TYSY_BIFLO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|23326956|gb|AAN25452.1| thymidylate synthase [Bifidobacterium longum NCC2705] gi|239515435|gb|EEQ55302.1| thymidylate synthase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 266 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 150/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL Sbjct: 3 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 62 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP + IDQIS+++ + Sbjct: 63 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++KMALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIA Sbjct: 123 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADDKLSCQLYQRSCDMFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QL R P P + I L Sbjct: 183 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEIR-KADSL 241 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 242 FDYQYEDFKVVGYQHHPTIKAPVAV 266 >gi|154486823|ref|ZP_02028230.1| hypothetical protein BIFADO_00651 [Bifidobacterium adolescentis L2-32] gi|154084686|gb|EDN83731.1| hypothetical protein BIFADO_00651 [Bifidobacterium adolescentis L2-32] Length = 266 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 146/265 (55%), Positives = 188/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRF+L + FPLLTTK V +K + +ELLWFL Sbjct: 3 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFNLKESFPLLTTKTVFFKGLAYELLWFL 62 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L H V IWDEWAD++G+LGP+YG QWRSWP D IDQIS+++ + Sbjct: 63 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 123 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G + GEF+ T GD H+Y+NH +Q QLSR+P PQ+ I L Sbjct: 183 SYSLLTLMMAQQTGLEPGEFVWTGGDCHVYDNHIDQVLEQLSRTPYPYPQIRIR-KADSL 241 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + +Y+ H I A V+V Sbjct: 242 FDYDYSDFEIVNYQHHPTIKAPVAV 266 >gi|119025406|ref|YP_909251.1| thymidylate synthase [Bifidobacterium adolescentis ATCC 15703] gi|118764990|dbj|BAF39169.1| thymidylate synthase [Bifidobacterium adolescentis ATCC 15703] Length = 266 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 146/265 (55%), Positives = 187/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRF+L FPLLTTK V +K + +ELLWFL Sbjct: 3 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFNLKDSFPLLTTKTVFFKGLAYELLWFL 62 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L H V IWDEWAD++G+LGP+YG QWRSWP D IDQIS+++ + Sbjct: 63 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 123 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDIFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G + GEF+ T GD H+Y+NH +Q QLSR+P PQ+ I L Sbjct: 183 SYSLLTLMMAQQTGLEPGEFVWTGGDCHVYDNHIDQVLEQLSRTPYPYPQIRIR-KADSL 241 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + +Y+ H I A V+V Sbjct: 242 FDYDYSDFEIVNYQHHPTIKAPVAV 266 >gi|254460113|ref|ZP_05073529.1| thymidylate synthase [Rhodobacterales bacterium HTCC2083] gi|206676702|gb|EDZ41189.1| thymidylate synthase [Rhodobacteraceae bacterium HTCC2083] Length = 250 Score = 302 bits (773), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 140/246 (56%), Positives = 180/246 (73%), Gaps = 1/246 (0%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 DRTG GT S FG Q R+ ++ GFPL+TTKK+H KS++HELLWFL GD+N+ YL +GVSI Sbjct: 5 DRTGTGTTSHFGLQCRYPMADGFPLVTTKKLHLKSIIHELLWFLAGDTNIKYLKDNGVSI 64 Query: 80 WDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 WDEWAD++G+LGP+YG QWR WP D IDQI+ +V++++ P SRR IVSAWN A + Sbjct: 65 WDEWADENGDLGPVYGSQWRRWPSGTDMGPIDQITDLVEAIKKTPDSRRLIVSAWNPAEV 124 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 MALPPCH L+Q + GKL QLYQRS D+FLG+PFNIASY+LL MLA V G + G+ Sbjct: 125 PDMALPPCHTLWQVRIAGGKLHLQLYQRSADMFLGVPFNIASYALLLHMLAHVTGHEPGD 184 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 FIH++GD H+Y+NH EQ QL+RSP+ L Q+ I + L F Y+DF + Y+P A I Sbjct: 185 FIHSIGDAHIYSNHMEQVQTQLARSPKALSQLKIKRQVSSLFDFTYDDFEIIGYDPDAGI 244 Query: 259 LAKVSV 264 A V+V Sbjct: 245 KAPVAV 250 >gi|313140945|ref|ZP_07803138.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171] gi|313133455|gb|EFR51072.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171] Length = 260 Score = 301 bits (772), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 148/261 (56%), Positives = 188/261 (72%), Gaps = 5/261 (1%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 +R ++ G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL+G S Sbjct: 1 MRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFLKGSS 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP---DYDGN-VIDQISSIVQSLRADP 123 NV +L H V IWD+WAD++G+LGP+YGVQWRSWP D N IDQI +++ +R P Sbjct: 61 NVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTSEDPNRTIDQIGNVLDLIRNHP 120 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIASYSL Sbjct: 121 DSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIASYSL 180 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LTMM+A G + GEF+ T GD H+Y+NH +Q QLSR P P++ I L ++ Sbjct: 181 LTMMIAQQTGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEIR-KADSLFDYQ 239 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YEDFT+ Y H I A V+V Sbjct: 240 YEDFTIVDYRHHPTIKAPVAV 260 >gi|313637263|gb|EFS02769.1| thymidylate synthase [Listeria seeligeri FSL S4-171] Length = 314 Score = 301 bits (772), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 148/314 (47%), Positives = 190/314 (60%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 ESFKTHILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L ++A Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALXXXLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G GEF+HT+GD HLYNNH EQ QLSR+P LP++I++ + F D +L Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLILSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P A+I A +SV Sbjct: 301 GYNPDASIKAPISV 314 >gi|90415501|ref|ZP_01223435.1| thymidylate synthase [marine gamma proteobacterium HTCC2207] gi|90332824|gb|EAS47994.1| thymidylate synthase [marine gamma proteobacterium HTCC2207] Length = 301 Score = 301 bits (771), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 148/306 (48%), Positives = 200/306 (65%), Gaps = 47/306 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H+ G + DRT GT+S FG+QMRFDLS+GFPL+TTKKVH KS++HELL Sbjct: 1 MKQYLDLIKHIRDHGVKKEDRTATGTQSIFGHQMRFDLSQGFPLVTTKKVHLKSILHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------------------------------- 83 WF+RGD+N+ YL +GV IW++W Sbjct: 61 WFIRGDTNIRYLVENGVGIWNDWPYQSWLRETDQEADFPMYSPEWKAKMKEFIQRIKDDD 120 Query: 84 --ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN---VALI 138 A + G+LGP+YG QWR +++G +DQ++ +V+ ++++P SRR IVSAWN + ++ Sbjct: 121 EFAQQYGDLGPVYGHQWR---NFEG--VDQLAQVVEDIKSNPDSRRLIVSAWNPKDIPVM 175 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 K LPPCH LFQFYV G+LSCQLYQRS DVFLG+PFNIASY++LT+M+A V G + G+ Sbjct: 176 VKSGLPPCHSLFQFYVTEGRLSCQLYQRSADVFLGVPFNIASYAILTLMIAQVTGLEPGD 235 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 F+HT GD HLY+NH +Q + LSR LP + INP + +L F +EDF L Y+ H I Sbjct: 236 FVHTFGDAHLYSNHMDQVEELLSRETYPLPTLAINPAVDNLFDFVFEDFELLDYQSHGPI 295 Query: 259 LAKVSV 264 A V+V Sbjct: 296 SAPVAV 301 >gi|254474624|ref|ZP_05088010.1| thymidylate synthase [Ruegeria sp. R11] gi|214028867|gb|EEB69702.1| thymidylate synthase [Ruegeria sp. R11] Length = 277 Score = 301 bits (770), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 141/277 (50%), Positives = 189/277 (68%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY + L ++ G DRTG GT S FG Q R+ L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MRQYHEALEQILTHGEASSDRTGTGTISYFGMQTRYPLADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P Y Sbjct: 61 WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRHFPRLELAEGTTGDEPLYRAG 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQI+ +V+ + P SRR IVSAWN A + MALPPCH L+Q V K+ QLYQRS Sbjct: 121 SVDQIADLVRMIETSPDSRRLIVSAWNPADVPDMALPPCHTLWQVRVQGRKMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LL MLA V G++ G+F+HT+GD H+Y+NH +Q LQLSR+P+ L Sbjct: 181 ADMFLGVPFNIASYALLLKMLAHVTGYEAGDFVHTIGDAHIYSNHMDQVKLQLSRTPKPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I ++ + F YEDF + +Y+P I A V+V Sbjct: 241 PELHIKRDVPSIFDFTYEDFEVVNYDPDPVIKAPVAV 277 >gi|5565933|gb|AAD45276.1|AF152114_4 thymidylate synthase [Mycoplasma gallisepticum] Length = 289 Score = 301 bits (770), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 145/294 (49%), Positives = 193/294 (65%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V+ G ++DRT GT S FG Q R+DL +GFPLLTTKK+ WK++ HELL Sbjct: 1 MKTYLDLLEKVMTKGEVKKDRTNTGTISYFGTQSRYDLREGFPLLTTKKMAWKAICHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WFL+GD+N+ YL H V+IW+EW A + G+LG Sbjct: 61 WFLKGDTNMKYLVDHNVNIWNEWPYEAFKKSNDFKGESLQDFVEKIKTDNQFAQQYGKLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D N +DQI ++ ++ +P+SRR IVSAWN I +MALPPCH FQ Sbjct: 121 PVYGKQWR-----DFNGVDQIEWVINEIKTNPFSRRLIVSAWNPGEIKEMALPPCHSFFQ 175 Query: 152 FYVDNG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 F+V+ ++S QLYQRSGD+FLG+PFNIASYSLL +M+A V + EFIHT+GD H+Y+ Sbjct: 176 FFVNEKYEISLQLYQRSGDLFLGVPFNIASYSLLLLMVAQVTWLKPAEFIHTIGDTHIYS 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH EQ +QL R P+ LP++ +NP+I ++ FR+ED +L +YE H I KV+V Sbjct: 236 NHLEQVKIQLQREPKKLPKVTLNPDIKNIFDFRFEDISLENYEHHDPIKGKVAV 289 >gi|32491069|ref|NP_871323.1| thymidylate synthase [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|30173417|sp|Q8D2N4|TYSY_WIGBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|25166276|dbj|BAC24466.1| thyA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 264 Score = 301 bits (770), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 142/264 (53%), Positives = 188/264 (71%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YLDLL ++K G + DRT GT S FGYQ+R +L++GFPLLTTK H+KS+V+ELL Sbjct: 1 MKEYLDLLNLILKNGYPKIDRTKTGTLSMFGYQIRINLNEGFPLLTTKYCHFKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+S+L ++ +SIW++WADK+G LGPIYG QWR+W D N IDQI + L+ Sbjct: 61 WFLRGDTNISFLKKNNISIWNKWADKNGNLGPIYGKQWRAWEDKKNNTIDQIEIALNKLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV +D M++PPCH LFQ YV N KLSCQ+YQRS D+FLG+PFNI S Sbjct: 121 KEPSSRRILVSSWNVGELDLMSIPPCHVLFQLYVINNKLSCQVYQRSCDIFLGLPFNIGS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT + A+ + I T GD+HLY NH QA LQL+RSP LP++ I +L Sbjct: 181 YALLTHIFANQCDLLVEDLIWTGGDIHLYKNHLNQAKLQLTRSPLPLPKIFIKKKPKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++ + DF L Y H I A +S+ Sbjct: 241 NYAFNDFLLIDYNHHPKIKAPISI 264 >gi|23099195|ref|NP_692661.1| thymidylate synthase [Oceanobacillus iheyensis HTE831] gi|33301729|sp|Q8EQG0|TYSY_OCEIH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|22777423|dbj|BAC13696.1| thymidylate synthase [Oceanobacillus iheyensis HTE831] Length = 317 Score = 300 bits (769), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + + K G R DRT GT S FG+Q+RFDL+KGFPLLTTK+V ++ V ELLWF+ Sbjct: 7 YLDLCKQIFKTGEQRGDRTNTGTHSIFGHQIRFDLNKGFPLLTTKRVPFRLVASELLWFI 66 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL +H +IW+EWA Sbjct: 67 KGDTNIRYLLKHNNNIWNEWAFEKWVNSADYQGPDMANFGLRSQKDENFNKQYQEQMELF 126 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 DK G+LG +YG QWR+W IDQ+ ++ S++ +P SRRHIVSAW Sbjct: 127 KTRILEDDSFADKYGDLGSVYGKQWRNWKTTQNETIDQLKDVIHSIKTNPNSRRHIVSAW 186 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I MALPPCH LFQFYV NGKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 187 NPEDIPTMALPPCHTLFQFYVSNGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHECG 246 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + G+F+HT GD H+Y+NH EQ + QL R R PQ+IIN + + +D + +Y Sbjct: 247 LEVGDFVHTFGDAHIYSNHVEQVETQLEREIRDFPQLIINKDKNSIFEMDLDDLVIENYN 306 Query: 254 PHAAILAKVSV 264 PH +I A ++V Sbjct: 307 PHPSIKAPIAV 317 >gi|260583621|ref|ZP_05851369.1| thymidylate synthase [Granulicatella elegans ATCC 700633] gi|260158247|gb|EEW93315.1| thymidylate synthase [Granulicatella elegans ATCC 700633] Length = 314 Score = 300 bits (769), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 149/314 (47%), Positives = 188/314 (59%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL + + G ++ DRTG GT+S FGYQMRFDL+KGFP+LTTK+V + + ELL Sbjct: 1 MKQYLELLEKIKQEGIEKSDRTGTGTKSIFGYQMRFDLTKGFPILTTKRVPFGLIKSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WF++GD+N+ YL +H IWDEWA Sbjct: 61 WFIKGDTNIRYLLQHNNHIWDEWAFKRYVESPDYTGEDMTDFGRRSLQDPVFKEVYEKEL 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ L+ P SRR +V Sbjct: 121 ETFCQRILNEDDFAAKYGELGNIYGSQWRHWKTTQGETIDQLAQVIEMLKTSPDSRRLLV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A+ Sbjct: 181 SAWNPEDVPSMALPPCHTMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAN 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + GEF+HTLGD HLY NH EQ DLQLSR P LPQ+++ L D L Sbjct: 241 EVGLEVGEFVHTLGDAHLYLNHLEQVDLQLSREPFELPQLVLKHPEKSLYDLEVADVVLE 300 Query: 251 SYEPHAAILAKVSV 264 YE H I A ++V Sbjct: 301 GYECHPTIKAPIAV 314 >gi|296129374|ref|YP_003636624.1| thymidylate synthase [Cellulomonas flavigena DSM 20109] gi|296021189|gb|ADG74425.1| thymidylate synthase [Cellulomonas flavigena DSM 20109] Length = 278 Score = 300 bits (769), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 140/261 (53%), Positives = 184/261 (70%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+Q+R+DL GFPL+TTK+V ++ V EL WFL Sbjct: 19 YEDLLRLVLATGTPKSDRTGTGTRSVFGHQLRYDLRAGFPLVTTKRVFFRGVAEELFWFL 78 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SN++ L V IWDEWAD+ GELGP+YGVQWRSWP DG +DQ+ ++ LRA+P Sbjct: 79 RGESNIASLLERNVHIWDEWADEHGELGPVYGVQWRSWPTPDGGHVDQLERLLGELRANP 138 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRH+VSAWNVA +D+MAL PCH FQ YV +G+LS Q+YQRS D+FLG+PFN+ASY+L Sbjct: 139 DSRRHLVSAWNVAELDRMALVPCHAFFQLYVADGRLSLQVYQRSADLFLGVPFNLASYAL 198 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A +G + G+ + T GD H+Y+NH EQ QLSR P P + + L + Sbjct: 199 LTHMIAQQVGLEVGDLVWTGGDCHIYDNHVEQVREQLSREPYPYPTLELR-EAPSLFDYA 257 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y H I A V+V Sbjct: 258 WDDVEVVGYRHHPTIAAPVAV 278 >gi|254281872|ref|ZP_04956840.1| thymidylate synthase [gamma proteobacterium NOR51-B] gi|219678075|gb|EED34424.1| thymidylate synthase [gamma proteobacterium NOR51-B] Length = 277 Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 147/277 (53%), Positives = 184/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LLR + G DR DRTG GTRS FG Q+RFDL +GFPLLTTKK+H+KSVV+EL+ Sbjct: 1 MRAYLELLRDIRDHGVDRGDRTGTGTRSVFGRQLRFDLREGFPLLTTKKIHFKSVVNELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +L +GVSIWDEWA +DG+LGP+YG QW +WP DG I+QI ++ LR Sbjct: 61 WFLSGDTNTRWLKENGVSIWDEWATEDGDLGPLYGAQWHAWPTRDGGSINQIDYVLDCLR 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR + AWNV + +MALPPCH L+QFYV NG LS QLY RS Sbjct: 121 NRPESRRILFHAWNVEYLPDESMTPQDNVAAGRMALPPCHLLYQFYVANGALSAQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIAS +LLT MLA E I +LGD H+Y+NH Q + QL+R P + Sbjct: 181 SDVFLGLPFNIASLALLTHMLAQQADLSVAEVIVSLGDAHIYSNHQRQVETQLAREPGSA 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + +R+EDF+L Y+P I A V+V Sbjct: 241 PTLAIGRRPDTIYDYRFEDFSLHDYDPQPPIPAPVAV 277 >gi|167756640|ref|ZP_02428767.1| hypothetical protein CLORAM_02177 [Clostridium ramosum DSM 1402] gi|167702815|gb|EDS17394.1| hypothetical protein CLORAM_02177 [Clostridium ramosum DSM 1402] Length = 292 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 138/295 (46%), Positives = 191/295 (64%), Gaps = 34/295 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD+ ++V++ G +R DRTG GTRS FGYQ R+DL GFPL+TTKK+ + + ELL Sbjct: 1 MKQYLDMCKYVLENGENREDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFLRPIAEELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL V IW+EW A K G+LG Sbjct: 61 WFIKGDTNIKYLVDRNVKIWNEWPYEDFKKSPDFNGETIEEFVEKIKTDDEFAKKHGDLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + +Y+G +DQ++ +V SL +P+SRRHI+ AWN A +D MALPPCH Q Sbjct: 121 PVYGAQWRDF-NYEG--VDQLAKLVDSLTNNPFSRRHIICAWNPAQVDNMALPPCHAFLQ 177 Query: 152 FYV--DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 FYV D LSCQLYQRS D+FLG+PFNIASY+L+T MLA G++ EFIHT+GD H+Y Sbjct: 178 FYVSADKKYLSCQLYQRSADIFLGVPFNIASYALMTEMLARTCGYEAKEFIHTIGDAHIY 237 Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +HFE Q++R P ++++NP++ + ++ ED + Y+ H ++ KVSV Sbjct: 238 KDHFEVVKQQIAREPLPKCKLVLNPDVKSIFDYKIEDIKIEDYQSHGKLVGKVSV 292 >gi|224283792|ref|ZP_03647114.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171] Length = 256 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 147/254 (57%), Positives = 184/254 (72%), Gaps = 5/254 (1%) Query: 15 GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74 G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL+G SNV +L Sbjct: 4 GTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFLKGSSNVRWLQE 63 Query: 75 HGVSIWDEWADKDGELGPIYGVQWRSWP---DYDGN-VIDQISSIVQSLRADPYSRRHIV 130 H V IWD+WAD++G+LGP+YGVQWRSWP D N IDQI +++ +R P SRR +V Sbjct: 64 HNVHIWDDWADENGDLGPVYGVQWRSWPAPTSEDPNRTIDQIGNVLDLIRNHPDSRRMVV 123 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIASYSLLTMM+A Sbjct: 124 SAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIASYSLLTMMIAQ 183 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G + GEF+ T GD H+Y+NH +Q QLSR P P++ I L ++YEDFT+ Sbjct: 184 QTGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEIR-KADSLFDYQYEDFTIV 242 Query: 251 SYEPHAAILAKVSV 264 Y H I A V+V Sbjct: 243 DYRHHPTIKAPVAV 256 >gi|224541512|ref|ZP_03682051.1| hypothetical protein CATMIT_00682 [Catenibacterium mitsuokai DSM 15897] gi|224525549|gb|EEF94654.1| hypothetical protein CATMIT_00682 [Catenibacterium mitsuokai DSM 15897] Length = 286 Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 140/289 (48%), Positives = 188/289 (65%), Gaps = 34/289 (11%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 + R++++ G DR DRTG GTRS FGYQ R+DL +GFPLLTTKK++ + + ELLWF++GD Sbjct: 1 MCRYILEHGEDRPDRTGTGTRSVFGYQTRYDLREGFPLLTTKKMYLRPIAEELLWFIKGD 60 Query: 67 SNVSYLHRHGVSIWDEW-----------------------------ADKDGELGPIYGVQ 97 +N+ YL V IW+EW A K G LGP+YG Q Sbjct: 61 TNIKYLVDRNVKIWNEWPYEDFKKSEDFNGETLEEFVEKIKNDDDFAKKHGNLGPVYGAQ 120 Query: 98 WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 WR +++ DQ+ ++ SL+ +P+SRRHI+SAWN + +D+MALPPCH L QFYV + Sbjct: 121 WR---NFNNEGTDQLMKLIDSLKNNPFSRRHIISAWNPSQVDEMALPPCHTLMQFYVSSD 177 Query: 158 K--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 K LSCQLYQRS D FLG+PFNIASY+LLT MLA V G++ EFIHT+GD H+Y NHF+ Sbjct: 178 KKYLSCQLYQRSADTFLGVPFNIASYALLTCMLAQVCGYEPKEFIHTIGDAHIYKNHFDV 237 Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+ R P LP++++N +I +L F+ ED L Y+ H + KVSV Sbjct: 238 VKTQIEREPLPLPRLVLNKDIDNLFDFKIEDIKLEGYQSHGPLKGKVSV 286 >gi|256961912|ref|ZP_05566083.1| thymidylate synthase [Enterococcus faecalis Merz96] gi|257085168|ref|ZP_05579529.1| thymidylate synthase [Enterococcus faecalis Fly1] gi|293382980|ref|ZP_06628898.1| thymidylate synthase [Enterococcus faecalis R712] gi|293389531|ref|ZP_06633988.1| thymidylate synthase [Enterococcus faecalis S613] gi|312907549|ref|ZP_07766540.1| thymidylate synthase [Enterococcus faecalis DAPTO 512] gi|312910167|ref|ZP_07769014.1| thymidylate synthase [Enterococcus faecalis DAPTO 516] gi|256952408|gb|EEU69040.1| thymidylate synthase [Enterococcus faecalis Merz96] gi|256993198|gb|EEU80500.1| thymidylate synthase [Enterococcus faecalis Fly1] gi|291079645|gb|EFE17009.1| thymidylate synthase [Enterococcus faecalis R712] gi|291081148|gb|EFE18111.1| thymidylate synthase [Enterococcus faecalis S613] gi|310626577|gb|EFQ09860.1| thymidylate synthase [Enterococcus faecalis DAPTO 512] gi|311289440|gb|EFQ67996.1| thymidylate synthase [Enterococcus faecalis DAPTO 516] Length = 315 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDAILNDEEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|257082535|ref|ZP_05576896.1| thymidylate synthase [Enterococcus faecalis E1Sol] gi|256990565|gb|EEU77867.1| thymidylate synthase [Enterococcus faecalis E1Sol] Length = 315 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LEVGEFVHTLGDAHLYKNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|29376139|ref|NP_815293.1| thymidylate synthase [Enterococcus faecalis V583] gi|227518767|ref|ZP_03948816.1| thymidylate synthase [Enterococcus faecalis TX0104] gi|227553378|ref|ZP_03983427.1| thymidylate synthase [Enterococcus faecalis HH22] gi|229550000|ref|ZP_04438725.1| thymidylate synthase [Enterococcus faecalis ATCC 29200] gi|255972782|ref|ZP_05423368.1| thymidylate synthase [Enterococcus faecalis T1] gi|256619078|ref|ZP_05475924.1| thymidylate synthase [Enterococcus faecalis ATCC 4200] gi|256762514|ref|ZP_05503094.1| thymidylate synthase [Enterococcus faecalis T3] gi|256965110|ref|ZP_05569281.1| thymidylate synthase [Enterococcus faecalis HIP11704] gi|257089900|ref|ZP_05584261.1| thymidylate synthase [Enterococcus faecalis CH188] gi|257416108|ref|ZP_05593102.1| thymidylate synthase [Enterococcus faecalis AR01/DG] gi|257419311|ref|ZP_05596305.1| thymidylate synthase [Enterococcus faecalis T11] gi|257422604|ref|ZP_05599594.1| thymidylate synthase [Enterococcus faecalis X98] gi|307273209|ref|ZP_07554455.1| thymidylate synthase [Enterococcus faecalis TX0855] gi|307274946|ref|ZP_07556109.1| thymidylate synthase [Enterococcus faecalis TX2134] gi|312900775|ref|ZP_07760072.1| thymidylate synthase [Enterococcus faecalis TX0470] gi|312903323|ref|ZP_07762503.1| thymidylate synthase [Enterococcus faecalis TX0635] gi|312951509|ref|ZP_07770405.1| thymidylate synthase [Enterococcus faecalis TX0102] gi|62901361|sp|Q834R3|TYSY_ENTFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|29343601|gb|AAO81363.1| thymidylate synthase [Enterococcus faecalis V583] gi|227073762|gb|EEI11725.1| thymidylate synthase [Enterococcus faecalis TX0104] gi|227177483|gb|EEI58455.1| thymidylate synthase [Enterococcus faecalis HH22] gi|229304913|gb|EEN70909.1| thymidylate synthase [Enterococcus faecalis ATCC 29200] gi|255963800|gb|EET96276.1| thymidylate synthase [Enterococcus faecalis T1] gi|256598605|gb|EEU17781.1| thymidylate synthase [Enterococcus faecalis ATCC 4200] gi|256683765|gb|EEU23460.1| thymidylate synthase [Enterococcus faecalis T3] gi|256955606|gb|EEU72238.1| thymidylate synthase [Enterococcus faecalis HIP11704] gi|256998712|gb|EEU85232.1| thymidylate synthase [Enterococcus faecalis CH188] gi|257157936|gb|EEU87896.1| thymidylate synthase [Enterococcus faecalis ARO1/DG] gi|257161139|gb|EEU91099.1| thymidylate synthase [Enterococcus faecalis T11] gi|257164428|gb|EEU94388.1| thymidylate synthase [Enterococcus faecalis X98] gi|306508394|gb|EFM77501.1| thymidylate synthase [Enterococcus faecalis TX2134] gi|306510194|gb|EFM79218.1| thymidylate synthase [Enterococcus faecalis TX0855] gi|310630475|gb|EFQ13758.1| thymidylate synthase [Enterococcus faecalis TX0102] gi|310633199|gb|EFQ16482.1| thymidylate synthase [Enterococcus faecalis TX0635] gi|311292256|gb|EFQ70812.1| thymidylate synthase [Enterococcus faecalis TX0470] gi|315147280|gb|EFT91296.1| thymidylate synthase [Enterococcus faecalis TX4244] gi|315150521|gb|EFT94537.1| thymidylate synthase [Enterococcus faecalis TX0012] gi|315152468|gb|EFT96484.1| thymidylate synthase [Enterococcus faecalis TX0031] gi|315155746|gb|EFT99762.1| thymidylate synthase [Enterococcus faecalis TX0043] gi|315158088|gb|EFU02105.1| thymidylate synthase [Enterococcus faecalis TX0312] gi|315169020|gb|EFU13037.1| thymidylate synthase [Enterococcus faecalis TX1341] gi|315169743|gb|EFU13760.1| thymidylate synthase [Enterococcus faecalis TX1342] gi|315172296|gb|EFU16313.1| thymidylate synthase [Enterococcus faecalis TX1346] gi|315575852|gb|EFU88043.1| thymidylate synthase [Enterococcus faecalis TX0309B] gi|315577691|gb|EFU89882.1| thymidylate synthase [Enterococcus faecalis TX0630] gi|315580504|gb|EFU92695.1| thymidylate synthase [Enterococcus faecalis TX0309A] gi|327535148|gb|AEA93982.1| thymidylate synthase [Enterococcus faecalis OG1RF] Length = 315 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|229545808|ref|ZP_04434533.1| thymidylate synthase [Enterococcus faecalis TX1322] gi|256853140|ref|ZP_05558510.1| thymidylate synthase [Enterococcus faecalis T8] gi|300861235|ref|ZP_07107322.1| thymidylate synthase [Enterococcus faecalis TUSoD Ef11] gi|307291981|ref|ZP_07571850.1| thymidylate synthase [Enterococcus faecalis TX0411] gi|229309120|gb|EEN75107.1| thymidylate synthase [Enterococcus faecalis TX1322] gi|256711599|gb|EEU26637.1| thymidylate synthase [Enterococcus faecalis T8] gi|295112995|emb|CBL31632.1| thymidylate synthase [Enterococcus sp. 7L76] gi|300850274|gb|EFK78024.1| thymidylate synthase [Enterococcus faecalis TUSoD Ef11] gi|306496979|gb|EFM66527.1| thymidylate synthase [Enterococcus faecalis TX0411] gi|315029370|gb|EFT41302.1| thymidylate synthase [Enterococcus faecalis TX4000] gi|315145054|gb|EFT89070.1| thymidylate synthase [Enterococcus faecalis TX2141] gi|315160429|gb|EFU04446.1| thymidylate synthase [Enterococcus faecalis TX0645] Length = 315 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|254515777|ref|ZP_05127837.1| thymidylate synthase [gamma proteobacterium NOR5-3] gi|219675499|gb|EED31865.1| thymidylate synthase [gamma proteobacterium NOR5-3] Length = 277 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 146/277 (52%), Positives = 182/277 (65%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLR ++ G + DRTG GT S FG Q R DL+ GFPLLTTKK+H +S+V+EL+ Sbjct: 1 MQQYQDLLRDILDNGVRKEDRTGTGTLSVFGRQFRHDLADGFPLLTTKKLHLRSIVNELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV++L HGVSIW+EWA G+LGP+YG QWR+WP DG I+QI ++ L+ Sbjct: 61 WFLNGDTNVAWLQEHGVSIWNEWATDTGDLGPVYGKQWRAWPTKDGGEINQIDYVLDCLK 120 Query: 121 ADPYSRRHIVSAWNV-------------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR + AWNV A +MALPPCH L+QFYV NG+LS QLY RS Sbjct: 121 NRPDSRRILFHAWNVEYLPDESLSPQENAAAGRMALPPCHLLYQFYVANGRLSAQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFN AS ++L MMLA G + GE I + GD HLY NH EQ QLSR PR L Sbjct: 181 SDTFLGLPFNTASLAVLVMMLAQQTGLEPGEIIISTGDSHLYLNHMEQVREQLSREPRPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ + + +R+EDF L Y PH I A V+V Sbjct: 241 PKLALLRRPESIYDYRFEDFELSDYNPHPHIPAPVAV 277 >gi|88706383|ref|ZP_01104088.1| Thymidylate synthase [Congregibacter litoralis KT71] gi|88699319|gb|EAQ96433.1| Thymidylate synthase [Congregibacter litoralis KT71] Length = 277 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 146/277 (52%), Positives = 183/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLR +++ G + DRTG GT S FG Q R +L+ GFPLLTTKKVH +S+++EL+ Sbjct: 1 MRQYHDLLRDILENGVRKEDRTGTGTLSVFGRQFRHNLADGFPLLTTKKVHLRSIINELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV++L HGVSIW+EWA + G+LGP+YG QWR+WP DG +DQI ++ LR Sbjct: 61 WFLNGDTNVAWLQEHGVSIWNEWATETGDLGPVYGKQWRAWPTQDGGEVDQIEYVLDCLR 120 Query: 121 ADPYSRRHIVSAWNV-------------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR + AWNV A +MALPPCH L+QFYV GKLS QLY RS Sbjct: 121 HRPDSRRILFHAWNVEYLPDESLSPQENARAGRMALPPCHLLYQFYVAEGKLSAQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFN+AS ++L MMLA + GE + + GD HLY NH EQ QLSR PR L Sbjct: 181 SDSFLGLPFNMASLAVLVMMLAQQADLEPGEIVVSTGDSHLYLNHMEQVQEQLSREPRPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + +R+EDF L Y PH AI A V+V Sbjct: 241 PTLAILRKPDSIYDYRFEDFELSGYNPHPAIPAPVAV 277 >gi|163791087|ref|ZP_02185507.1| thymidylate synthase [Carnobacterium sp. AT7] gi|159873643|gb|EDP67727.1| thymidylate synthase [Carnobacterium sp. AT7] Length = 315 Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 140/312 (44%), Positives = 192/312 (61%), Gaps = 50/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL+L R V++ G+++ DRTG GT+S FG+QMRF+L +GFPLLTTK+V + + ELLWF Sbjct: 4 EYLNLARKVLEVGNEKTDRTGTGTKSLFGHQMRFNLQEGFPLLTTKRVPFSLIKSELLWF 63 Query: 63 LRGDSNVSYLHRHGVSIWDEWA----------------------------------DKD- 87 ++G++N+ YL +H IWDEWA +K+ Sbjct: 64 IKGNTNIRYLLQHNNHIWDEWAFERFVKSEDYKGPDMTNFGRKSLIDSEFNTLYLKEKEA 123 Query: 88 ---------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 GELG +YG QWR W G IDQ+ +++ ++ P SRR +VSA Sbjct: 124 FCTRILEDETFALQYGELGNVYGAQWRKWKTTQGETIDQLKDVIKLIKTSPDSRRMLVSA 183 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 WNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAHET 243 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEF+HTLGD HLY+NH EQ + QL+R P+ LP +I+N + + F +D + Y Sbjct: 244 GLEVGEFVHTLGDAHLYSNHIEQINKQLAREPKELPTLILNSSKTSIFDFEMDDIKIEGY 303 Query: 253 EPHAAILAKVSV 264 +PH I A ++V Sbjct: 304 DPHPGIKAPIAV 315 >gi|53803146|ref|YP_115128.1| thymidylate synthase [Methylococcus capsulatus str. Bath] gi|62901250|sp|Q603S2|TYSY_METCA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|53756907|gb|AAU91198.1| thymidylate synthase [Methylococcus capsulatus str. Bath] Length = 260 Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 145/264 (54%), Positives = 181/264 (68%), Gaps = 4/264 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G + DRTG GT S FG MRFDLS+G PL+TTKK+H S++HELL Sbjct: 1 MRPYLDLLRDILDHGCPKGDRTGTGTLSVFGRMMRFDLSRGLPLVTTKKLHLPSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ G +NV L RHGV+IWDEWAD +GELGP+YG QWR+W IDQ++ +V+ LR Sbjct: 61 WFVSGSTNVRDLQRHGVTIWDEWADDNGELGPVYGRQWRNW----NGAIDQLAGLVEQLR 116 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWN + +D MALPPCH FQ +V +G+LS RS DVFLG+PFNIA Sbjct: 117 RNPGSRRLLVSAWNPSDLDAMALPPCHYAFQCHVADGRLSLMFQMRSADVFLGLPFNIAG 176 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA G++ GE I GDVHLY NH EQA LQL+R P P + + L Sbjct: 177 YALLTHMLAQQTGYEPGELIWCGGDVHLYLNHLEQARLQLTREPYPPPTLKLARKPGSLF 236 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF + Y+ H I A V+V Sbjct: 237 DYRYEDFVVEDYQAHPHIKAAVAV 260 >gi|116333431|ref|YP_794958.1| thymidylate synthase [Lactobacillus brevis ATCC 367] gi|122269882|sp|Q03S95|TYSY_LACBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116098778|gb|ABJ63927.1| thymidylate synthase [Lactobacillus brevis ATCC 367] Length = 316 Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 192/311 (61%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G ++ DRTG GT S FGYQMRF+L +GFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKTVLTTGHEKTDRTGTGTISLFGYQMRFNLQEGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 66 RGDTNIRFLLQHHNHIWDEWAFQRYVDSPEYHGPDMTDFGRRSLVDADFNQRYQAEKKAF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 D G+LG +YG QWR+W + G IDQ+++++++LR P SRR IVSAW Sbjct: 126 CDRIVTDQAFGDHFGDLGLVYGSQWRAWQGHQGETIDQLANVIETLRTHPDSRRMIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N A + MALPPCH LFQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A +G Sbjct: 186 NPADVPSMALPPCHTLFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTSLIAKEVG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + G+F+HTLGD H+Y+NH EQ QL+R+P PQ+ +NP+ + + D + Y+ Sbjct: 246 LEVGDFVHTLGDAHIYSNHVEQIKTQLARTPHAAPQLWLNPDKSSIFDYEMSDIKVTGYD 305 Query: 254 PHAAILAKVSV 264 P AI A V+V Sbjct: 306 PEPAIKAPVAV 316 >gi|259503404|ref|ZP_05746306.1| thymidylate synthase [Lactobacillus antri DSM 16041] gi|259168649|gb|EEW53144.1| thymidylate synthase [Lactobacillus antri DSM 16041] Length = 320 Score = 298 bits (763), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 151/312 (48%), Positives = 191/312 (61%), Gaps = 50/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L R+V+K G ++ DRTG GTRS FGYQMRFDLSKGFP+LTTKKV + + ELLWF Sbjct: 9 QYLELARYVLKHGHEKTDRTGTGTRSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLWF 68 Query: 63 LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84 LRGD+N+ +L +H IWDEWA Sbjct: 69 LRGDTNIRFLLQHHNHIWDEWAFKKWVESDEYHGPDMTDFGHRWLVDADFKQQYLAEKKA 128 Query: 85 -------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 D+D G+LG +YG QWR W +G IDQI++++ ++ P SRR IVSA Sbjct: 129 FCQRIVDDEDFAKKYGDLGLVYGSQWRHWKTSNGQTIDQIANVIHQIKTTPDSRRMIVSA 188 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 189 WNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQC 248 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G Q G+F+HTLGD H+Y NH +Q QLSR+PR PQ+I+ + + D L Y Sbjct: 249 GLQVGDFVHTLGDAHIYLNHLDQVKEQLSRTPREAPQLILPAEPKPIDQYEMTDIKLAGY 308 Query: 253 EPHAAILAKVSV 264 AAI A V+V Sbjct: 309 THEAAIKAPVAV 320 >gi|297571008|ref|YP_003696782.1| thymidylate synthase [Arcanobacterium haemolyticum DSM 20595] gi|296931355|gb|ADH92163.1| thymidylate synthase [Arcanobacterium haemolyticum DSM 20595] Length = 266 Score = 298 bits (762), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 144/263 (54%), Positives = 186/263 (70%), Gaps = 2/263 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL V+ G+ + DRTG GT S FG Q+R+DLS+GFP +TTK V K+V ELLWF Sbjct: 5 QYEDLLADVLANGTVKGDRTGTGTLSVFGRQLRYDLSQGFPRITTKFVAMKAVKGELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD+N+S+L G+SIWDEWA+ DG+LGP+YG QWRSWP G IDQI++++ ++ + Sbjct: 65 LRGDTNISWLRERGISIWDEWANDDGDLGPVYGYQWRSWPAPSGEHIDQIANVIDQIKNN 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA +D MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRLIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G G+F+ + GD H+Y NH EQ Q+SR P P + + D+ S+ Sbjct: 185 LLTHMVAQQTGLDVGDFVWSGGDCHIYLNHLEQVREQISREPYPFPTLALT-KAPDIFSY 243 Query: 243 RYEDFTLR-SYEPHAAILAKVSV 264 +D + Y+ H A+ A V+V Sbjct: 244 TMDDISAADGYQHHPALHAPVAV 266 >gi|323342122|ref|ZP_08082355.1| thymidylate synthase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464547|gb|EFY09740.1| thymidylate synthase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 289 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 150/294 (51%), Positives = 198/294 (67%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL++ + V+ GS R DRTG GT FGYQMRFDLSKGFPLLTTKKVH+ S+ ELL Sbjct: 1 MKNYLEMCQFVLDEGSRREDRTGTGTTGVFGYQMRFDLSKGFPLLTTKKVHFPSLAKELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF+ GD+N+ +L + V IW+EW A K GELG Sbjct: 61 WFVSGDTNIKWLVENKVRIWNEWPYELFKKSDDYNGETMDEFIARIVADDLFAQKYGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D+ G +DQI++++++++ +PYSRR I+SAWN +D+MALPPCH Q Sbjct: 121 PVYGKQWR---DFGG--VDQINNVIETIKTNPYSRRIIMSAWNPTEVDQMALPPCHAFMQ 175 Query: 152 FYVDNG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FYV N KLS QLYQRS DVFLG+PFNIASY+LL M+A V + GEF+HT GD+H+YN Sbjct: 176 FYVSNDRKLSLQLYQRSADVFLGVPFNIASYALLLHMIAKVCDLEVGEFVHTFGDLHIYN 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H++ +QL+R P++LPQ+II+ N + F++EDF + Y+PH I AKVSV Sbjct: 236 DHYDAVQMQLAREPKSLPQLIIHGNQEKITDFKFEDFEVVGYDPHPLIKAKVSV 289 >gi|328957378|ref|YP_004374764.1| thymidylate synthase [Carnobacterium sp. 17-4] gi|328673702|gb|AEB29748.1| thymidylate synthase [Carnobacterium sp. 17-4] Length = 316 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 143/312 (45%), Positives = 187/312 (59%), Gaps = 50/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL+L + V++ G + DRTG GT+S FGYQMR+DL KGFPLLTTK+V + + ELLWF Sbjct: 5 EYLNLGKKVLEDGHVKTDRTGTGTKSLFGYQMRYDLQKGFPLLTTKRVPFGLIKSELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84 ++G++N+ YL +H IWDEWA Sbjct: 65 IKGNTNIRYLLQHNNHIWDEWAFERFVKSEEYVGPDMTDFGRRALVDEEFKAVYDVEKEA 124 Query: 85 ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 K GELG +YG QWR W G IDQ+ ++Q ++ P SRR +VSA Sbjct: 125 FCTRILEDDAFAAKYGELGNVYGAQWRRWKTTQGETIDQLKDVIQQIKTTPDSRRMLVSA 184 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A + Sbjct: 185 WNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAHEV 244 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEF+HTLGD HLY+NHFEQ QL+R PR P + +N + + F ED + Y Sbjct: 245 GLEVGEFVHTLGDAHLYSNHFEQMKKQLAREPRDFPTIALNESKNSIFDFEMEDIQIEGY 304 Query: 253 EPHAAILAKVSV 264 +PH I A ++V Sbjct: 305 DPHPGIKAPIAV 316 >gi|325571013|ref|ZP_08146585.1| thymidylate synthase [Enterococcus casseliflavus ATCC 12755] gi|325156098|gb|EGC68284.1| thymidylate synthase [Enterococcus casseliflavus ATCC 12755] Length = 315 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R ++ G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V + + ELLWFL Sbjct: 5 YLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL H IWDEWA Sbjct: 65 KGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHELKQF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 + G+LG +YG QWR W G IDQI +++ ++ P SRR IVSAW Sbjct: 125 CEKILSDDTFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIEMIKTTPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV +G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPTMALPPCHTMFQFYVHDGRLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + G+FIHTLGD HLY+NH EQ QL+RS R P + +NP + F ED TL Y+ Sbjct: 245 LEVGDFIHTLGDAHLYSNHIEQMKEQLTRSVRPAPSLQLNPEKQSIFDFEMEDITLAGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|322383990|ref|ZP_08057720.1| thymidylate synthase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151467|gb|EFX44654.1| thymidylate synthase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 318 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L RHV++ G + DRTG GT S FGYQMRF+L +GFPLLTTK++ ++ +V ELLWF+ Sbjct: 8 YLELCRHVLEHGEIKEDRTGTGTVSLFGYQMRFNLQEGFPLLTTKRIPFRLIVSELLWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL H IWDEWA K Sbjct: 68 KGDTNIRYLLEHNNHIWDEWAFKHYVESSSYQGPDMTDFGLRSQRDEAFLIQYEEQMNKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR+W +G IDQ+ I+ +++ +P SRR IVSAW Sbjct: 128 TERILKDPQFALEFGDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I M LPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 188 NPEDIPSMVLPPCHTLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHECG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y+NH +Q LQLSR P+ LP + INP + + D L Y+ Sbjct: 248 IEAGEFIHTLGDAHVYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEGYD 307 Query: 254 PHAAILAKVSV 264 PH +I A V+V Sbjct: 308 PHPSIKAPVAV 318 >gi|260662124|ref|ZP_05863020.1| thymidylate synthase [Lactobacillus fermentum 28-3-CHN] gi|260553507|gb|EEX26399.1| thymidylate synthase [Lactobacillus fermentum 28-3-CHN] Length = 319 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 189/313 (60%), Gaps = 51/313 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL RHV++FG + DRTG GT+S FGYQMRF+L +GFP+LTTKKV + V ELLW Sbjct: 8 EQYLDLARHVLEFGDQKGDRTGTGTKSVFGYQMRFNLQEGFPILTTKKVAFGLVKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K Sbjct: 68 FLRGDTNIRFLLEHKNHIWDEWAFKKWVESDEYTGPDMTDFGRRSLVDAAFNEEYKKEKR 127 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G+LG +YG QWRSW +G V DQI +++ ++ +P SRR IV+ Sbjct: 128 AFCQRILEDDDFAKQYGDLGLVYGSQWRSWQTPNGPV-DQIKKVIEQIKTNPASRRLIVT 186 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN A +D MALPPCH +FQFYV+NGKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 187 AWNPADVDNMALPPCHTMFQFYVNNGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 246 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NH +Q QLSR PQ+I+ + ++ ED L Sbjct: 247 CGLEVGEFVHTLGDAHIYLNHLDQIKEQLSRPVHQAPQLILPAEAKPIDEYQMEDIKLEG 306 Query: 252 YEPHAAILAKVSV 264 YE AI A V+V Sbjct: 307 YEHEDAIKAPVAV 319 >gi|255975838|ref|ZP_05426424.1| thymidylate synthase [Enterococcus faecalis T2] gi|307278059|ref|ZP_07559143.1| thymidylate synthase [Enterococcus faecalis TX0860] gi|255968710|gb|EET99332.1| thymidylate synthase [Enterococcus faecalis T2] gi|306505456|gb|EFM74642.1| thymidylate synthase [Enterococcus faecalis TX0860] Length = 315 Score = 297 bits (761), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLTKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|257086729|ref|ZP_05581090.1| thymidylate synthase [Enterococcus faecalis D6] gi|256994759|gb|EEU82061.1| thymidylate synthase [Enterococcus faecalis D6] gi|315027251|gb|EFT39183.1| thymidylate synthase [Enterococcus faecalis TX2137] Length = 315 Score = 297 bits (761), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|307271003|ref|ZP_07552286.1| thymidylate synthase [Enterococcus faecalis TX4248] gi|307289121|ref|ZP_07569077.1| thymidylate synthase [Enterococcus faecalis TX0109] gi|306499830|gb|EFM69191.1| thymidylate synthase [Enterococcus faecalis TX0109] gi|306512501|gb|EFM81150.1| thymidylate synthase [Enterococcus faecalis TX4248] gi|315036993|gb|EFT48925.1| thymidylate synthase [Enterococcus faecalis TX0027] gi|315164030|gb|EFU08047.1| thymidylate synthase [Enterococcus faecalis TX1302] gi|323480739|gb|ADX80178.1| thymidylate synthase [Enterococcus faecalis 62] Length = 315 Score = 297 bits (761), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|306823471|ref|ZP_07456846.1| thymidylate synthase [Bifidobacterium dentium ATCC 27679] gi|309802582|ref|ZP_07696686.1| thymidylate synthase [Bifidobacterium dentium JCVIHMP022] gi|304553178|gb|EFM41090.1| thymidylate synthase [Bifidobacterium dentium ATCC 27679] gi|308220646|gb|EFO76954.1| thymidylate synthase [Bifidobacterium dentium JCVIHMP022] Length = 290 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 143/265 (53%), Positives = 185/265 (69%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG Q+RFDL GFPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRRILTEGTLKSDRTGTGTISLFGQQIRFDLKDGFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L H V IWDEWAD++G+LGP+YG QWRSWP D IDQI++++ + Sbjct: 87 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQITNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMVVSAWNPAEVEHMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G + GEF+ T GD H+Y+NH +Q QL R P P++ I+ L Sbjct: 207 SYSLLTLMMAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLGREPYPYPKIRIH-EAESL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y H I A V+V Sbjct: 266 FDYDYSDFEIVDYRHHPTIKAPVAV 290 >gi|87122432|ref|ZP_01078312.1| thymidylate synthetase [Marinomonas sp. MED121] gi|86162225|gb|EAQ63510.1| thymidylate synthetase [Marinomonas sp. MED121] Length = 277 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 135/277 (48%), Positives = 191/277 (68%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y+ LL V++ G + DRTG GT S FG Q+R+DL++GFPLLTTKK+H +S++HELL Sbjct: 1 MLPYIQLLNDVLENGQFKGDRTGTGTYSVFGRQVRYDLAEGFPLLTTKKLHIRSILHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GV+IWDEWA K+GELGP+YG QWRSW DG DQ+++++ SL+ Sbjct: 61 WFLKGETNIQYLSDNGVTIWDEWATKEGELGPVYGAQWRSWKGEDGKEYDQVTALINSLK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRRHI++ WNVA + +MALPPCH L+QFYV + KLS LY RS Sbjct: 121 NNPNSRRHIINGWNVACLPDESKAPDVNAAEGRMALPPCHVLYQFYVCDNKLSASLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG P+N AS + LT MLA GE + ++GD HLY+NH EQA +Q+ R+P+ L Sbjct: 181 NDLFLGNPYNTASLAFLTHMLAQQCDLDVGEIVISIGDCHLYSNHIEQAKIQVQRTPKKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I+ + +++EDF + Y+P I A +++ Sbjct: 241 PKLKIHRKPESIFDYKFEDFEILDYDPEPHISAPIAI 277 >gi|171741175|ref|ZP_02916982.1| hypothetical protein BIFDEN_00247 [Bifidobacterium dentium ATCC 27678] gi|283455458|ref|YP_003360022.1| thyA Thymidylate synthase [Bifidobacterium dentium Bd1] gi|171276789|gb|EDT44450.1| hypothetical protein BIFDEN_00247 [Bifidobacterium dentium ATCC 27678] gi|283102092|gb|ADB09198.1| thyA Thymidylate synthase [Bifidobacterium dentium Bd1] Length = 290 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 143/265 (53%), Positives = 185/265 (69%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG Q+RFDL GFPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRRIMTEGTLKSDRTGTGTISLFGQQIRFDLKDGFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L H V IWDEWAD++G+LGP+YG QWRSWP D IDQI++++ + Sbjct: 87 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQITNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMVVSAWNPAEVEHMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G + GEF+ T GD H+Y+NH +Q QL R P P++ I+ L Sbjct: 207 SYSLLTLMMAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLGREPYPYPKIRIH-EAESL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y H I A V+V Sbjct: 266 FDYDYSDFEIVDYRHHPTIKAPVAV 290 >gi|320103743|ref|YP_004179334.1| thymidylate synthase [Isosphaera pallida ATCC 43644] gi|319751025|gb|ADV62785.1| thymidylate synthase [Isosphaera pallida ATCC 43644] Length = 285 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 151/274 (55%), Positives = 190/274 (69%), Gaps = 13/274 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTR-----STFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 YLDLLR V+ G + R VG S FG Q+R+DLS FPL TTK+V + SVVHE Sbjct: 12 YLDLLRDVLHHGRRQPTRAKVGGEFIDALSVFGRQVRYDLSDRFPLFTTKRVSFHSVVHE 71 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 LLWFLRG++NV L GV+IWDEWAD+ GELGPIYG QWR+W DG V DQI +I+ Sbjct: 72 LLWFLRGETNVRSLQAAGVTIWDEWADEAGELGPIYGRQWRAWNGPDGRVFDQIQAILDG 131 Query: 119 ---LRADPYS---RRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVF 171 LR DP + RR I++AWNVA ++KMALPPCHCL QF++D+ G+LSCQLYQRS D+F Sbjct: 132 LTQLRQDPRASVGRRLILNAWNVADLEKMALPPCHCLAQFHLDDAGRLSCQLYQRSADLF 191 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFN+ASY+LLT ++A V G + GEFIHTLGD H+Y NH +Q QL R PR LP++ Sbjct: 192 LGVPFNVASYALLTRLIAHVQGLEPGEFIHTLGDAHIYVNHLDQVRRQLERDPRPLPRVT 251 Query: 232 INPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++ L R E L Y PH A+ +V+V Sbjct: 252 LAEDLDPTLKKVRREQIVLEGYHPHPALPGEVAV 285 >gi|184155363|ref|YP_001843703.1| thymidylate synthase [Lactobacillus fermentum IFO 3956] gi|227515167|ref|ZP_03945216.1| thymidylate synthase [Lactobacillus fermentum ATCC 14931] gi|183226707|dbj|BAG27223.1| thymidylate synthase [Lactobacillus fermentum IFO 3956] gi|227086499|gb|EEI21811.1| thymidylate synthase [Lactobacillus fermentum ATCC 14931] gi|299783196|gb|ADJ41194.1| Thymidylate synthase [Lactobacillus fermentum CECT 5716] Length = 319 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 151/313 (48%), Positives = 188/313 (60%), Gaps = 51/313 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL RHV++FG + DRTG GT+S FGYQMRF+L +GFP+LTTKKV + V ELLW Sbjct: 8 EQYLDLARHVLEFGDQKGDRTGTGTKSVFGYQMRFNLQEGFPILTTKKVAFGLVKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K Sbjct: 68 FLRGDTNIRFLLEHKNHIWDEWAFKKWVESDEYTGPDMTDFGRRSLVDAAFNEEYKKEKR 127 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWRSW +G V DQI +++ ++ +P SRR IV+ Sbjct: 128 AFCQRILEDDDFAKQYGNLGLVYGSQWRSWQTPNGPV-DQIKKVIEQIKTNPDSRRLIVT 186 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN A +D MALPPCH +FQFYV+NGKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 187 AWNPADVDNMALPPCHTMFQFYVNNGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 246 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NH +Q QLSR PQ+I+ + ++ ED L Sbjct: 247 CGLEVGEFVHTLGDAHIYLNHLDQIKEQLSRPVHQAPQLILPAEAKPIDEYQMEDIKLEG 306 Query: 252 YEPHAAILAKVSV 264 YE AI A V+V Sbjct: 307 YEHEDAIKAPVAV 319 >gi|256958995|ref|ZP_05563166.1| thymidylate synthase [Enterococcus faecalis DS5] gi|256949491|gb|EEU66123.1| thymidylate synthase [Enterococcus faecalis DS5] Length = 315 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTTFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|90961685|ref|YP_535601.1| thymidylate synthase [Lactobacillus salivarius UCC118] gi|227890773|ref|ZP_04008578.1| thymidylate synthase [Lactobacillus salivarius ATCC 11741] gi|301300762|ref|ZP_07206946.1| thymidylate synthase [Lactobacillus salivarius ACS-116-V-Col5a] gi|123391358|sp|Q1WU17|TYSY_LACS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|90820879|gb|ABD99518.1| Thymidylate synthase [Lactobacillus salivarius UCC118] gi|227867182|gb|EEJ74603.1| thymidylate synthase [Lactobacillus salivarius ATCC 11741] gi|300214485|gb|ADJ78901.1| Thymidylate synthase (TS) (TSase) [Lactobacillus salivarius CECT 5713] gi|300851612|gb|EFK79312.1| thymidylate synthase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 318 Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 190/311 (61%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+R +++ G ++ DRTG GT+S FGYQMRF+L++GFPLLTTKKV + + ELLWFL Sbjct: 8 YLQLIRDILEKGHEKSDRTGTGTKSLFGYQMRFNLAEGFPLLTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRAQEDDNFNKVYQDEKKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W +G IDQI ++++++ +P SRR IV+AW Sbjct: 128 CQKIVEDQEFANKFGNLGDVYGAQWRHWQTRNGETIDQIKDVIETIKNNPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV++GKLSCQLYQRS DVFLG+PFNIASY+LLT M+A G Sbjct: 188 NPEDVPLSALPPCHTLFQFYVNDGKLSCQLYQRSADVFLGVPFNIASYALLTHMIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NH +Q + QL R P P + +NP +++ F ED +++Y Sbjct: 248 LEVGEFVHTLGDAHIYLNHLDQVNEQLQRKPNDAPTLWLNPEKKNIMDFEMEDIKVKNYH 307 Query: 254 PHAAILAKVSV 264 H+AI A V+V Sbjct: 308 SHSAIKAPVAV 318 >gi|329766967|ref|ZP_08258495.1| thymidylate synthase [Gemella haemolysans M341] gi|328837692|gb|EGF87317.1| thymidylate synthase [Gemella haemolysans M341] Length = 310 Score = 295 bits (756), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 144/312 (46%), Positives = 200/312 (64%), Gaps = 56/312 (17%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL L +H++ G ++ DRTGVGT+S FGYQM+FDLS+GFPLLTTKKV++ V ELLWF Sbjct: 5 EYLKLCQHILDNGIEKEDRTGVGTKSVFGYQMKFDLSEGFPLLTTKKVNFNLVWSELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84 ++GD+N+ +L + +IW+EWA Sbjct: 65 IKGDTNIKFLLENKNNIWNEWAFKKWIESEKYTGPDMTDFGHRTLVDEEFSKQYKEQMAI 124 Query: 85 ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 +K G+LG +YG QWR++ N IDQ+ ++V+ ++ +P SRR IVS+ Sbjct: 125 FKERVLTDESFSEKYGDLGNVYGKQWRNF-----NGIDQLKNVVEQIKTNPSSRRLIVSS 179 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN A +D MALPPCH LFQFYV++GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A Sbjct: 180 WNPAEVDTMALPPCHSLFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKEC 239 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEF+HTLGD H+Y NHF+Q Q+SR+P +LP++ +N + + + ED + +Y Sbjct: 240 GLEVGEFVHTLGDAHIYKNHFDQVKEQMSRTPYSLPELKVN-DFESIFDLKIEDVEVVNY 298 Query: 253 EPHAAILAKVSV 264 E H I A ++V Sbjct: 299 ESHPFIKAPIAV 310 >gi|257867789|ref|ZP_05647442.1| thymidylate synthase [Enterococcus casseliflavus EC30] gi|257874116|ref|ZP_05653769.1| thymidylate synthase [Enterococcus casseliflavus EC10] gi|257801872|gb|EEV30775.1| thymidylate synthase [Enterococcus casseliflavus EC30] gi|257808280|gb|EEV37102.1| thymidylate synthase [Enterococcus casseliflavus EC10] Length = 315 Score = 295 bits (756), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 147/311 (47%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R ++ G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V + + ELLWFL Sbjct: 5 YLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL H IWDEWA Sbjct: 65 KGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHELKLF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 + G+LG +YG QWR W G IDQI ++ ++ P SRR IVSAW Sbjct: 125 CEKILADDAFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIDMIKTTPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPTMALPPCHTMFQFYVHKGRLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + G+F+HTLGD HLY+NH EQ QL+RS R P + +NP + F ED TL Y+ Sbjct: 245 LEVGDFVHTLGDAHLYSNHMEQMKEQLTRSVRPAPTLQLNPEKQSIFDFEMEDITLAGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|257876680|ref|ZP_05656333.1| thymidylate synthase [Enterococcus casseliflavus EC20] gi|257810846|gb|EEV39666.1| thymidylate synthase [Enterococcus casseliflavus EC20] Length = 315 Score = 295 bits (756), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 147/311 (47%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R ++ G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V + + ELLWFL Sbjct: 5 YLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL H IWDEWA Sbjct: 65 KGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHELKLF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 + G+LG +YG QWR W G IDQI ++ ++ P SRR IVSAW Sbjct: 125 CEKILADDAFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIDMIKTTPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPTMALPPCHTMFQFYVHEGRLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + G+F+HTLGD HLY+NH EQ QL+RS R P + +NP + F ED TL Y+ Sbjct: 245 LEVGDFVHTLGDAHLYSNHMEQMKEQLTRSVRPAPTLQLNPEKQSIFDFEMEDITLAGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|239636892|ref|ZP_04677891.1| thymidylate synthase [Staphylococcus warneri L37603] gi|239597566|gb|EEQ80064.1| thymidylate synthase [Staphylococcus warneri L37603] Length = 318 Score = 295 bits (755), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L ++K G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILKIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIKYLLQYNNNIWNEWAFENYINSEDYHGPDMTNFGHRSLQDSEFNELYKAEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D DGN +DQ+ ++++ ++ P SRRHIVSAW Sbjct: 129 KENILNDDTFAQKYGDLGNVYGKQWRDWEDKDGNHVDQLKTVIEQIKQHPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAVETQLSRDSFNPPQIKINTD-KSIFDINYEDIELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|194246714|ref|YP_002004353.1| thymidylate synthase [Candidatus Phytoplasma mali] gi|254790246|sp|B3QZX0|TYSY_PHYMT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|193807071|emb|CAP18507.1| Thymidylate synthase [Candidatus Phytoplasma mali] Length = 288 Score = 295 bits (754), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 138/293 (47%), Positives = 192/293 (65%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L R ++ +G + DRT GTRS FGYQMRF+L KGFPLLTTKK+++K+++HELL Sbjct: 1 MQAYLNLCRDILNYGKKKIDRTKTGTRSIFGYQMRFNLEKGFPLLTTKKMNFKAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL ++ V+IW+EW A G+LG Sbjct: 61 WFIKGDTNIRYLVQNNVNIWNEWPYQKYCNSNFFQNLTLQEFIDKIIIDEKFAKIHGDLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 PIYG QWR++ IDQ++ ++ ++ +P+SRR I++AW+ +I M LPPCH + Q Sbjct: 121 PIYGHQWRNFQG-----IDQLTDLISEIKKNPHSRRLILTAWDPTVIKDMLLPPCHVMIQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 YV+ K+S QLYQRSGDVFLGIPFNIASYSLL +++A G + EFIHT+GD H+YNN Sbjct: 176 CYVEKNKISMQLYQRSGDVFLGIPFNIASYSLLLIIIAQCTGLKPFEFIHTIGDAHIYNN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ Q+ R P+ LP M +NP+I+D+ F + DF L YE + + V+V Sbjct: 236 HIEQIQKQIKRIPKKLPIMTLNPHIIDINQFTFNDFNLEKYESYGILKGVVAV 288 >gi|294781666|ref|ZP_06747001.1| thymidylate synthase [Enterococcus faecalis PC1.1] gi|294451218|gb|EFG19685.1| thymidylate synthase [Enterococcus faecalis PC1.1] gi|315033984|gb|EFT45916.1| thymidylate synthase [Enterococcus faecalis TX0017] gi|329571685|gb|EGG53366.1| thymidylate synthase [Enterococcus faecalis TX1467] Length = 317 Score = 294 bits (753), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 147/313 (46%), Positives = 187/313 (59%), Gaps = 52/313 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGN--VIDQISSIVQSLRADPYSRRHIVS 131 +K GELG IYG QWR W DGN IDQ++++++ ++ +P SRR IVS Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGNGSFIDQLANVIEMIKTNPDSRRLIVS 184 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 185 AWNPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHE 244 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Sbjct: 245 TGLAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEG 304 Query: 252 YEPHAAILAKVSV 264 Y+PH I A ++V Sbjct: 305 YDPHPTIKAPIAV 317 >gi|295396869|ref|ZP_06806997.1| thymidylate synthase [Aerococcus viridans ATCC 11563] gi|294974895|gb|EFG50594.1| thymidylate synthase [Aerococcus viridans ATCC 11563] Length = 317 Score = 294 bits (753), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 150/312 (48%), Positives = 188/312 (60%), Gaps = 50/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD L+H++ G D+ DRTGVGTRS FGYQMRFDLS+GFPLLTTKKV + + ELLWF Sbjct: 6 QYLDFLQHILDNGQDKSDRTGVGTRSVFGYQMRFDLSEGFPLLTTKKVPFGLIKSELLWF 65 Query: 63 LRGDSNVSYLHRHGVSIWDEWA----------------------DKD------------- 87 L+GD+N+ YL + IWDEWA D D Sbjct: 66 LKGDTNIRYLLENNNHIWDEWAFKRWVESDAYQGPDMTDFGLRADADPEFKKVYQEVKQA 125 Query: 88 ---------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 GELG +YG QWR W +G+ IDQI++I+ L+ +P SRR I+SA Sbjct: 126 FCQRVLEDDDFAREFGELGNVYGKQWRHWETREGDSIDQIANIIDQLKHNPDSRRIILSA 185 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH + QFYV +GKLSCQLYQRSGD FLG+PFNIASY+LLT +LA Sbjct: 186 WNPEDVPDMALPPCHTMSQFYVQDGKLSCQLYQRSGDAFLGVPFNIASYALLTHLLAREA 245 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + G+++HT GD H+YNNHF Q QLSR P LP + I + +D ++ Y Sbjct: 246 GLEVGDYVHTFGDAHIYNNHFNQVYEQLSRQPLDLPTLEIGGEGKSIFDLEKDDIKVKGY 305 Query: 253 EPHAAILAKVSV 264 + H AI A V+V Sbjct: 306 KAHDAIKAPVAV 317 >gi|257898835|ref|ZP_05678488.1| thymidylate synthase [Enterococcus faecium Com15] gi|293570261|ref|ZP_06681330.1| thymidylate synthase [Enterococcus faecium E980] gi|257836747|gb|EEV61821.1| thymidylate synthase [Enterococcus faecium Com15] gi|291609668|gb|EFF38929.1| thymidylate synthase [Enterococcus faecium E980] Length = 315 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ IWDEWA Sbjct: 65 KGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLADPEFNEEYKKQSKLF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G+LG IYG QWR W DG IDQI ++++++ P SRR IVSAW Sbjct: 125 CEKILTDDSFAEKYGDLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R P + +N + F ED L Y+ Sbjct: 245 LEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQLEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|315640698|ref|ZP_07895800.1| thymidylate synthase [Enterococcus italicus DSM 15952] gi|315483453|gb|EFU73947.1| thymidylate synthase [Enterococcus italicus DSM 15952] Length = 315 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R ++ G+ + DRTG GT+S FG+QMRFDLS+GFPLLTTK+V + + ELLWF+ Sbjct: 5 YLDLGRKILTEGNSKSDRTGTGTKSIFGHQMRFDLSEGFPLLTTKRVPFGLIKSELLWFI 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL +H IWDEWA Sbjct: 65 KGDTNIRYLLQHNNHIWDEWAFEKYVASDSYHGPDMTNFGRRSLEDDAFNEVYQNELAQF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 D+ G+LG IYG QWR W G IDQ+ ++ ++ P SRR IVSAW Sbjct: 125 CERIVNDERFADEFGDLGHIYGYQWRHWDTAQGGFIDQLQDVIHQIKHTPDSRRMIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 185 NPEDVPSMALPPCHTMFQFYVHEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETN 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEF+HTLGD HLY NHF+Q QL+RS R P++++NP + F D TL Y+ Sbjct: 245 LQVGEFVHTLGDAHLYMNHFDQMTEQLTRSVRPAPKLVLNPEKQSIFDFDVADITLEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|312869138|ref|ZP_07729312.1| thymidylate synthase [Lactobacillus oris PB013-T2-3] gi|311095384|gb|EFQ53654.1| thymidylate synthase [Lactobacillus oris PB013-T2-3] Length = 320 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 150/315 (47%), Positives = 193/315 (61%), Gaps = 54/315 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL R+V++ G ++ DRTG GTRS FGYQMRFDL+KGFP+LTTKKV + + ELLW Sbjct: 8 QQYLDLARYVLENGHEKTDRTGTGTRSVFGYQMRFDLAKGFPILTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------DKD---------- 87 FLRGD+N+ +L +H IWDEWA D+D Sbjct: 68 FLRGDTNIRFLLQHHNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLVDEDFKKQYLAEKK 127 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G+LG +YG QWR W +G IDQI++++ ++ SRR IVS Sbjct: 128 AFCQRIIDDADFAKKYGDLGLVYGSQWRHWKTSNGETIDQIANVIHQIKTTSDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII--NPNIVDLLSFRYEDFTL 249 G Q G+F+HTLGD H+Y NH +Q QLSR+P P++I+ P ++D + ED L Sbjct: 248 CGLQVGDFVHTLGDAHIYLNHLDQIKEQLSRTPHEAPRLILPAEPKLID--QYEMEDIKL 305 Query: 250 RSYEPHAAILAKVSV 264 Y AAI A V+V Sbjct: 306 EGYTHEAAIKAPVAV 320 >gi|257887704|ref|ZP_05667357.1| thymidylate synthase [Enterococcus faecium 1,141,733] gi|257896198|ref|ZP_05675851.1| thymidylate synthase [Enterococcus faecium Com12] gi|293377199|ref|ZP_06623407.1| thymidylate synthase [Enterococcus faecium PC4.1] gi|257823758|gb|EEV50690.1| thymidylate synthase [Enterococcus faecium 1,141,733] gi|257832763|gb|EEV59184.1| thymidylate synthase [Enterococcus faecium Com12] gi|292644219|gb|EFF62321.1| thymidylate synthase [Enterococcus faecium PC4.1] Length = 315 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 182/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ IWDEWA Sbjct: 65 KGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLTDPEFNEEYKKQSKLF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G LG IYG QWR W DG IDQI ++++++ P SRR IVSAW Sbjct: 125 CEKILTDDSFAEKYGNLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R P + +N + F ED L Y+ Sbjct: 245 LEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQLEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|119503469|ref|ZP_01625552.1| Thymidylate synthase [marine gamma proteobacterium HTCC2080] gi|119460531|gb|EAW41623.1| Thymidylate synthase [marine gamma proteobacterium HTCC2080] Length = 277 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 143/277 (51%), Positives = 183/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR + G+ R DRTG GTRS FG Q+RFDL GFPLLTTKKVH+KSV +EL+ Sbjct: 1 MRAYLDLLRDIRDHGAVRTDRTGTGTRSLFGRQLRFDLKDGFPLLTTKKVHFKSVANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N ++L HGVSIWDEWA + G+LGP+YG QWR WP DG IDQ++ ++ L+ Sbjct: 61 WFLKGDTNTAWLKEHGVSIWDEWATEQGDLGPLYGAQWRRWPTQDGREIDQLAYVLDCLK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR + WNV + +MALPPCH L+QFYV +GKLS L+ RS Sbjct: 121 NRPDSRRILFHGWNVEYLPDETLSPQENVRAGRMALPPCHLLYQFYVVDGKLSTLLFIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIAS +LLT MLA G E + ++GD H+Y+NH +Q ++QL+RSP Sbjct: 181 SDTFLGLPFNIASVALLTHMLAQQSGLGVSEVVVSIGDAHIYSNHVDQVEVQLARSPAPP 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + + L + YEDF L Y P A I A V++ Sbjct: 241 PTLKLLRQPDSLFDYCYEDFALEGYSPQAHISAPVAI 277 >gi|227551179|ref|ZP_03981228.1| thymidylate synthase [Enterococcus faecium TX1330] gi|227179647|gb|EEI60619.1| thymidylate synthase [Enterococcus faecium TX1330] Length = 324 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 182/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + ELLWFL Sbjct: 14 YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ IWDEWA Sbjct: 74 KGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLTDPEFNEEYKKQSKLF 133 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G LG IYG QWR W DG IDQI ++++++ P SRR IVSAW Sbjct: 134 CEKILTDDSFAEKYGNLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLIVSAW 193 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 194 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 253 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R P + +N + F ED L Y+ Sbjct: 254 LEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQLEGYD 313 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 314 PHPTIKAPIAV 324 >gi|257884869|ref|ZP_05664522.1| thymidylate synthase [Enterococcus faecium 1,231,501] gi|261207592|ref|ZP_05922277.1| thymidylate synthase [Enterococcus faecium TC 6] gi|289565104|ref|ZP_06445557.1| thymidylate synthase [Enterococcus faecium D344SRF] gi|293556751|ref|ZP_06675314.1| thymidylate synthase [Enterococcus faecium E1039] gi|294614834|ref|ZP_06694729.1| thymidylate synthase [Enterococcus faecium E1636] gi|294617513|ref|ZP_06697144.1| thymidylate synthase [Enterococcus faecium E1679] gi|257820707|gb|EEV47855.1| thymidylate synthase [Enterococcus faecium 1,231,501] gi|260077975|gb|EEW65681.1| thymidylate synthase [Enterococcus faecium TC 6] gi|289163111|gb|EFD10958.1| thymidylate synthase [Enterococcus faecium D344SRF] gi|291592296|gb|EFF23910.1| thymidylate synthase [Enterococcus faecium E1636] gi|291596253|gb|EFF27515.1| thymidylate synthase [Enterococcus faecium E1679] gi|291601083|gb|EFF31372.1| thymidylate synthase [Enterococcus faecium E1039] Length = 315 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ IWDEWA Sbjct: 65 KGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQSKLF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 + G+LG IYG QWR W DG IDQI ++++++ P SRR IVSAW Sbjct: 125 CEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R P +++N + F ED L Y+ Sbjct: 245 LAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQLEGYD 304 Query: 254 PHAAILAKVSV 264 PH AI A ++V Sbjct: 305 PHPAIKAPIAV 315 >gi|257869664|ref|ZP_05649317.1| thymidylate synthase [Enterococcus gallinarum EG2] gi|257803828|gb|EEV32650.1| thymidylate synthase [Enterococcus gallinarum EG2] Length = 315 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + +++ G+ + DRTG GT+S FG+QMRFDLS+GFPLLTTK+V + + ELLWFL Sbjct: 5 YLDLGKKILETGNVKGDRTGTGTKSIFGHQMRFDLSQGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ +L +H IWDEWA Sbjct: 65 KGDTNIRFLLQHKNHIWDEWAFERYIKSEDYTGPDMTDFGRRSLIDEEFNASYQEELQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G+LG +YG QWR W G IDQI +++ ++ P SRR IVSAW Sbjct: 125 CERILNDEAFAEKFGDLGHVYGYQWRHWETTKGEFIDQIKEVIEMIKTTPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPTMALPPCHTMFQFYVHEGRLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEFIHTLGD HLY+NH EQ QLSR+ R+ P + +NP + F D T+ Y+ Sbjct: 245 LQVGEFIHTLGDAHLYSNHMEQMKEQLSRTIRSAPTLHLNPEKQSIFDFEMGDITIEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|194467928|ref|ZP_03073914.1| Thymidylate synthase [Lactobacillus reuteri 100-23] gi|194452781|gb|EDX41679.1| Thymidylate synthase [Lactobacillus reuteri 100-23] Length = 320 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 146/313 (46%), Positives = 188/313 (60%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL+R+V+ G + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV + + ELLW Sbjct: 8 EQYLDLIRYVLANGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIRFLLQHKNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W G+ IDQI++++Q ++ P SRR IVS Sbjct: 128 SFCQRILDDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NH +Q QL+R+P P++I+ + + D L Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307 Query: 252 YEPHAAILAKVSV 264 Y +AI A V+V Sbjct: 308 YTHESAIKAPVAV 320 >gi|329770535|ref|ZP_08261913.1| thymidylate synthase [Gemella sanguinis M325] gi|328836284|gb|EGF85953.1| thymidylate synthase [Gemella sanguinis M325] Length = 310 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 143/312 (45%), Positives = 198/312 (63%), Gaps = 56/312 (17%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YLDL +H++ G +++DRTGVGT+S FGYQM+FDL+ GFPLLTTKKV++ V ELLWF Sbjct: 5 EYLDLCKHILDNGIEKKDRTGVGTKSIFGYQMKFDLNNGFPLLTTKKVNFNLVWSELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84 ++GD+N+ +L ++ +IW+EWA Sbjct: 65 IKGDTNIRFLLQNNNNIWNEWAFKKWVESDEYNGPDMTDFGHRTLVDEDFAKDYKEQMKF 124 Query: 85 ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 +K G+LG +YG QWR++ N +DQ+ ++++ ++ +P SRR IVS+ Sbjct: 125 FKEKILTDDEFSNKYGDLGNVYGKQWRNF-----NGVDQLKNVIEQIKENPSSRRLIVSS 179 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN A +D MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A Sbjct: 180 WNPAEVDTMALPPCHSLFQFYVSDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKEC 239 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 + GEF+HTLGD H+YNNHF+Q + Q+SR+P LP + IN + + D L +Y Sbjct: 240 NLEVGEFVHTLGDAHIYNNHFDQVNEQISRTPYDLPSLKINE-FQSIFDLKISDVELVNY 298 Query: 253 EPHAAILAKVSV 264 E H I A ++V Sbjct: 299 ESHPFIKAPIAV 310 >gi|69246745|ref|ZP_00604093.1| Thymidylate synthase [Enterococcus faecium DO] gi|314938020|ref|ZP_07845330.1| thymidylate synthase [Enterococcus faecium TX0133a04] gi|314941994|ref|ZP_07848855.1| thymidylate synthase [Enterococcus faecium TX0133C] gi|314948753|ref|ZP_07852125.1| thymidylate synthase [Enterococcus faecium TX0082] gi|314951771|ref|ZP_07854810.1| thymidylate synthase [Enterococcus faecium TX0133A] gi|314991822|ref|ZP_07857280.1| thymidylate synthase [Enterococcus faecium TX0133B] gi|314995863|ref|ZP_07860950.1| thymidylate synthase [Enterococcus faecium TX0133a01] gi|68195099|gb|EAN09559.1| Thymidylate synthase [Enterococcus faecium DO] gi|313589967|gb|EFR68812.1| thymidylate synthase [Enterococcus faecium TX0133a01] gi|313593633|gb|EFR72478.1| thymidylate synthase [Enterococcus faecium TX0133B] gi|313596050|gb|EFR74895.1| thymidylate synthase [Enterococcus faecium TX0133A] gi|313599246|gb|EFR78091.1| thymidylate synthase [Enterococcus faecium TX0133C] gi|313642595|gb|EFS07175.1| thymidylate synthase [Enterococcus faecium TX0133a04] gi|313644819|gb|EFS09399.1| thymidylate synthase [Enterococcus faecium TX0082] Length = 324 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + ELLWFL Sbjct: 14 YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ IWDEWA Sbjct: 74 KGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQSKLF 133 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 + G+LG IYG QWR W DG IDQI ++++++ P SRR IVSAW Sbjct: 134 CEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKQVIEAIKKTPDSRRLIVSAW 193 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 194 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 253 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R P +++N + F ED L Y+ Sbjct: 254 LAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQLEGYD 313 Query: 254 PHAAILAKVSV 264 PH AI A ++V Sbjct: 314 PHPAIKAPIAV 324 >gi|299537230|ref|ZP_07050533.1| thymidylate synthase [Lysinibacillus fusiformis ZC1] gi|298727471|gb|EFI68043.1| thymidylate synthase [Lysinibacillus fusiformis ZC1] Length = 325 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 148/318 (46%), Positives = 186/318 (58%), Gaps = 57/318 (17%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V ELLWF+ Sbjct: 8 YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL +H IWDEWA K Sbjct: 68 KGDTNIRYLLQHNNHIWDEWAFKKWVESDEYTGPDMTDFGRRCLVDESFNALYQKELASF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W DG +DQ+ ++ ++ P SRR IV+AW Sbjct: 128 CERVLTDDDFAQQYGDLGNVYGKQWRHWTTSDGESLDQLQDVIHQIKHQPDSRRIIVNAW 187 Query: 134 NV-------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 N A K ALPPCH +FQFYV NGKLSCQL QRS D LG PFNIASY+LLT Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVANGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247 Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246 ++A G + GEFIH++GD H+Y NH EQ QLSR PR LP + INPN + ED Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLSREPRNLPTLHINPNKASIFDIELED 307 Query: 247 FTLRSYEPHAAILAKVSV 264 ++ Y+PH AI A ++V Sbjct: 308 LSIEGYDPHPAIKAPIAV 325 >gi|257878008|ref|ZP_05657661.1| thymidylate synthase [Enterococcus faecium 1,230,933] gi|257881206|ref|ZP_05660859.1| thymidylate synthase [Enterococcus faecium 1,231,502] gi|257889793|ref|ZP_05669446.1| thymidylate synthase [Enterococcus faecium 1,231,410] gi|257892270|ref|ZP_05671923.1| thymidylate synthase [Enterococcus faecium 1,231,408] gi|258616504|ref|ZP_05714274.1| thymidylate synthase [Enterococcus faecium DO] gi|260559058|ref|ZP_05831244.1| thymidylate synthase [Enterococcus faecium C68] gi|293563409|ref|ZP_06677858.1| thymidylate synthase [Enterococcus faecium E1162] gi|293568067|ref|ZP_06679405.1| thymidylate synthase [Enterococcus faecium E1071] gi|294622290|ref|ZP_06701333.1| thymidylate synthase [Enterococcus faecium U0317] gi|257812236|gb|EEV40994.1| thymidylate synthase [Enterococcus faecium 1,230,933] gi|257816864|gb|EEV44192.1| thymidylate synthase [Enterococcus faecium 1,231,502] gi|257826153|gb|EEV52779.1| thymidylate synthase [Enterococcus faecium 1,231,410] gi|257828649|gb|EEV55256.1| thymidylate synthase [Enterococcus faecium 1,231,408] gi|260074815|gb|EEW63131.1| thymidylate synthase [Enterococcus faecium C68] gi|291589288|gb|EFF21098.1| thymidylate synthase [Enterococcus faecium E1071] gi|291598182|gb|EFF29280.1| thymidylate synthase [Enterococcus faecium U0317] gi|291604670|gb|EFF34155.1| thymidylate synthase [Enterococcus faecium E1162] Length = 315 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ IWDEWA Sbjct: 65 KGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQSKLF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 + G+LG IYG QWR W DG IDQI ++++++ P SRR IVSAW Sbjct: 125 CEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKQVIEAIKKTPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R P +++N + F ED L Y+ Sbjct: 245 LAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQLEGYD 304 Query: 254 PHAAILAKVSV 264 PH AI A ++V Sbjct: 305 PHPAIKAPIAV 315 >gi|148544000|ref|YP_001271370.1| thymidylate synthase [Lactobacillus reuteri DSM 20016] gi|184153394|ref|YP_001841735.1| thymidylate synthase [Lactobacillus reuteri JCM 1112] gi|227364913|ref|ZP_03848958.1| thymidylate synthase [Lactobacillus reuteri MM2-3] gi|325682462|ref|ZP_08161979.1| thymidylate synthase [Lactobacillus reuteri MM4-1A] gi|172048237|sp|A5VJK9|TYSY_LACRD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148531034|gb|ABQ83033.1| thymidylate synthase [Lactobacillus reuteri DSM 20016] gi|183224738|dbj|BAG25255.1| thymidylate synthase [Lactobacillus reuteri JCM 1112] gi|227070060|gb|EEI08438.1| thymidylate synthase [Lactobacillus reuteri MM2-3] gi|324978301|gb|EGC15251.1| thymidylate synthase [Lactobacillus reuteri MM4-1A] Length = 320 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL+R+V+ G + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV + + ELLW Sbjct: 8 EQYLDLIRYVLANGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIRFLLQHKNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W G+ IDQI++++Q ++ P SRR IVS Sbjct: 128 AFCQRILEDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NH +Q QL+R+P P++I+ + + D L Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307 Query: 252 YEPHAAILAKVSV 264 Y AI A V+V Sbjct: 308 YTHEPAIKAPVAV 320 >gi|239631533|ref|ZP_04674564.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525998|gb|EEQ64999.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 316 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 190/311 (61%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKVH+ + ELLWFL Sbjct: 6 YLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVHFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 66 RGDTNIRFLLQHKNHIWDEWAFEKWVTSPDYHGPDMTDFGHRSQKDPEFAASYREQMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q G+FIHT GD HLY NH +Q QL+R+PR P +++NP+ D+ F +D L +Y+ Sbjct: 246 LQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|126650266|ref|ZP_01722494.1| thymidylate synthase [Bacillus sp. B14905] gi|126592916|gb|EAZ86898.1| thymidylate synthase [Bacillus sp. B14905] Length = 325 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 147/318 (46%), Positives = 186/318 (58%), Gaps = 57/318 (17%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V ELLWF+ Sbjct: 8 YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL +H IWDEWA Sbjct: 68 KGDTNIRYLLQHNNHIWDEWAFKKWVESDDYTGPDMTDFGRRCLVDDAFNTLYQQELASF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K GELG +YG QWR W G IDQ+ ++ ++ +P SRR IV+AW Sbjct: 128 CERVLADDDFAQKYGELGNVYGKQWRHWTTSTGESIDQLQDVIHQIKHNPDSRRIIVNAW 187 Query: 134 NV-------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 N A K ALPPCH +FQFYV NGKLSCQL QRS D LG PFNIASY+LLT Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVSNGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247 Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246 ++A G + GEFIH++GD H+Y NH EQ QL+R P+ LP + INPN + ED Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLAREPKELPTLHINPNKASIFDIELED 307 Query: 247 FTLRSYEPHAAILAKVSV 264 ++ Y+PH AI A ++V Sbjct: 308 LSIEGYDPHPAIKAPIAV 325 >gi|227543427|ref|ZP_03973476.1| thymidylate synthase [Lactobacillus reuteri CF48-3A] gi|300910094|ref|ZP_07127554.1| thymidylate synthase [Lactobacillus reuteri SD2112] gi|227186579|gb|EEI66650.1| thymidylate synthase [Lactobacillus reuteri CF48-3A] gi|300892742|gb|EFK86102.1| thymidylate synthase [Lactobacillus reuteri SD2112] Length = 320 Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL+R+V+ G + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV + + ELLW Sbjct: 8 EQYLDLIRYVLTNGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIRFLLQHKNHIWDEWAFKKWVESAEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W G+ IDQI++++Q ++ P SRR IVS Sbjct: 128 AFCQRILEDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NH +Q QL+R+P P++I+ + + D L Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307 Query: 252 YEPHAAILAKVSV 264 Y AI A V+V Sbjct: 308 YTYEPAIKAPVAV 320 >gi|1674210|gb|AAB96164.1| thymidylate synthase [Mycoplasma pneumoniae M129] Length = 328 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 139/293 (47%), Positives = 190/293 (64%), Gaps = 35/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL R+V++ G R +RT FGYQM FD+SK FPLLTTKKVHWKS+VHELL Sbjct: 42 MQQYLDLARYVLEHGKYRPNRTDTAGIGVFGYQMHFDISKHFPLLTTKKVHWKSIVHELL 101 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL + V+IW+EW A + G LG Sbjct: 102 WFIKGDTNIKYLVDNKVNIWNEWPYESFKKSPHFNGESQKEFIERIRQDAKFAQQFGNLG 161 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D N +DQ+ ++ ++ +P+SRR IVS+WN +D+M LPPCH L+Q Sbjct: 162 PVYGKQWR-----DFNGVDQLKKVIAQIKVNPFSRRLIVSSWNPNEVDQMLLPPCHSLYQ 216 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV +G+LSCQLYQRSGD+FLGIPFNIASYSLL ++A + G F+HT+GD H+Y N Sbjct: 217 FYVQDGQLSCQLYQRSGDIFLGIPFNIASYSLLVYLVAKETNLKPGSFVHTIGDAHIYEN 276 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ LQL+R P+ LP++++ + + ++++D L Y+ H I +V+V Sbjct: 277 HLEQIKLQLTRQPKPLPKVVLKSD-KSIFDYQFDDIELVDYDHHPTIKGEVAV 328 >gi|169828204|ref|YP_001698362.1| thymidylate synthase [Lysinibacillus sphaericus C3-41] gi|168992692|gb|ACA40232.1| Thymidylate synthase [Lysinibacillus sphaericus C3-41] Length = 325 Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 147/318 (46%), Positives = 186/318 (58%), Gaps = 57/318 (17%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V ELLWF+ Sbjct: 8 YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL +H IWDEWA Sbjct: 68 KGDTNIRYLLQHNNHIWDEWAFKRWVESDDYTGPDMTDFGRRCLVDDAFNTMYQQELASF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K GELG +YG QWR W G IDQ+ ++ ++ +P SRR IV+AW Sbjct: 128 CERVLADDDFAQKYGELGNVYGKQWRHWSTSTGESIDQLQDVIHQIKHNPDSRRIIVNAW 187 Query: 134 NV-------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 N A K ALPPCH +FQFYV NGKLSCQL QRS D LG PFNIASY+LLT Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVSNGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247 Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246 ++A G + GEFIH++GD H+Y NH EQ QL+R P+ LP + INPN + ED Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLAREPKDLPTLHINPNKTSIFDIELED 307 Query: 247 FTLRSYEPHAAILAKVSV 264 ++ Y+PH AI A ++V Sbjct: 308 LSIEGYDPHPAIKAPIAV 325 >gi|306818997|ref|ZP_07452714.1| thymidylate synthase [Mobiluncus mulieris ATCC 35239] gi|304648190|gb|EFM45498.1| thymidylate synthase [Mobiluncus mulieris ATCC 35239] Length = 266 Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 137/263 (52%), Positives = 184/263 (69%), Gaps = 2/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DLLR +++ G + DRTG GTRS F Q+R+DLS+GFP +TTK ++W VV ELLW Sbjct: 6 HQYEDLLREILREGVPKDDRTGTGTRSLFARQLRYDLSQGFPAITTKSLYWHGVVGELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G++N ++L + + IWDEWAD DG LGP+YG QWR+WP G V DQI+ ++++L+ Sbjct: 66 FLQGNTNATWLQENNIHIWDEWADTDGNLGPVYGHQWRAWPTEAGTV-DQIAGLIETLKT 124 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV+ + +MAL PCH FQ +V G+LS Q+YQRS D+FLG+PFNIASY Sbjct: 125 DPSSRRMVVSAWNVSDLPRMALAPCHMFFQCWVGAGRLSLQIYQRSCDMFLGVPFNIASY 184 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA G + GE + T GD H+YNNH Q QLSR P P +I++ + Sbjct: 185 ALLTHMLAQQSGLEVGELVWTGGDCHIYNNHVNQVQEQLSRDPYPFPTLILD-QAQSIDD 243 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + +E L +Y+ H I A V+V Sbjct: 244 YTFEMIRLENYQHHPRISAPVAV 266 >gi|330684989|gb|EGG96664.1| thymidylate synthase [Staphylococcus epidermidis VCU121] Length = 318 Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L ++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILNIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIKYLLQYNNNIWNEWAFENYINSEDYHGPDMTNFGHRSLQDSEFNELYKAEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D DGN DQ+ ++++ ++ P SRRHIVSAW Sbjct: 129 KENILNDDAFAQKYGDLGNVYGKQWRDWEDKDGNHFDQLKTVIEQIKQHPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHMDAVETQLSRDSFNPPQIKINTD-KSIFDIEYEDIELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|331701412|ref|YP_004398371.1| Thymidylate synthase [Lactobacillus buchneri NRRL B-30929] gi|329128755|gb|AEB73308.1| Thymidylate synthase [Lactobacillus buchneri NRRL B-30929] Length = 316 Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R+V++ G + DRT GT STFGYQMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLARYVLENGHKKTDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ +L +H IWDEWA Sbjct: 66 KGDTNIQFLLKHKNHIWDEWAFEKFVASNDYTGPDMTDFSHRAQKDPEFNKVYQEQKMLF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G IDQI +++ ++ P SRR IVSAW Sbjct: 126 CDRIVNDDDFAKKYGDLGLVYGSQWRAWKTSTGGTIDQIQNVIDLIKTHPDSRRMIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV++GKLSCQLYQRSGD+FLG+P+NIASY+LLT M+A G Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSCQLYQRSGDIFLGVPYNIASYALLTSMIARECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + G+F+HT GD H+Y NH +Q + LSR PR P++ +NP L F D +++Y+ Sbjct: 246 LEVGDFVHTFGDAHIYLNHIDQVEELLSRKPRQAPELWLNPEKKHLDEFEMADIKVKNYD 305 Query: 254 PHAAILAKVSV 264 P+ I A V+V Sbjct: 306 PYPVIKAPVAV 316 >gi|241889739|ref|ZP_04777037.1| thymidylate synthase [Gemella haemolysans ATCC 10379] gi|241863361|gb|EER67745.1| thymidylate synthase [Gemella haemolysans ATCC 10379] Length = 310 Score = 291 bits (745), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 143/312 (45%), Positives = 197/312 (63%), Gaps = 56/312 (17%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL L H+++ G ++ DRTGVGT+S FGYQM+F+LS+GFPLLTTKKV++ V ELLWF Sbjct: 5 EYLKLCNHILENGIEKEDRTGVGTKSIFGYQMKFNLSEGFPLLTTKKVNFNLVWSELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD----------------------------------- 87 ++GD+N+ +L + +IW+EWA K Sbjct: 65 IKGDTNIKFLLENKNNIWNEWAFKKWIESDEYTGPDMTDFGHRTLVDEKFSKQYKEQMTI 124 Query: 88 ---------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 G+LG +YG QWR D N IDQ+ ++V+ ++ +P SRR IVS+ Sbjct: 125 FKERILSDEEFSKKFGDLGNVYGKQWR-----DFNGIDQLKNVVEQIKTNPSSRRLIVSS 179 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN A +D MALPPCH LFQFYV++GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A Sbjct: 180 WNPAEVDTMALPPCHSLFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKEC 239 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEF+HTLGD H+Y NHF+Q Q+SR+P +LP++ + + + + ED + +Y Sbjct: 240 GLEVGEFVHTLGDAHIYKNHFDQVKEQMSRTPYSLPELKVK-DFESIFDLKIEDVEIVNY 298 Query: 253 EPHAAILAKVSV 264 E H I A ++V Sbjct: 299 ESHPFIKAPIAV 310 >gi|169351012|ref|ZP_02867950.1| hypothetical protein CLOSPI_01789 [Clostridium spiroforme DSM 1552] gi|169292074|gb|EDS74207.1| hypothetical protein CLOSPI_01789 [Clostridium spiroforme DSM 1552] Length = 295 Score = 291 bits (745), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 135/298 (45%), Positives = 189/298 (63%), Gaps = 37/298 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL++ ++V++ G DR DRTG GTRS FGYQ R+DL GFPL+TTKK+ + + ELL Sbjct: 1 MKQYLEMCKYVLENGEDRSDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFIRPIAEELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------ADKD--------------------------G 88 WF++GD+N+ YL V IW+EW KD G Sbjct: 61 WFIKGDTNIKYLVDRNVKIWNEWPYENYKKSKDYQGETIEEFIEKIKNLPEDDSFVLKYG 120 Query: 89 ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 +LGP+YG QWR++ +Y+G +DQ++ +V SL+ DP+SRRHI+ AWN A +D M LPPCH Sbjct: 121 DLGPVYGAQWRNF-NYEG--VDQLAKLVDSLKNDPFSRRHIICAWNPAQVDNMTLPPCHA 177 Query: 149 LFQFYV--DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206 QFYV D LSCQLYQRS D+FLG+PFNIASY+L+ MLA G++ EF+HT+GD Sbjct: 178 FLQFYVSADKKYLSCQLYQRSADIFLGVPFNIASYALMVEMLARTCGYEAKEFVHTIGDA 237 Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H+Y +HF+ QL R P ++++NP + + ++ ED + Y+ + ++ KVSV Sbjct: 238 HIYKDHFDVVKQQLERKPLPKCKLVLNPEVKSIFDYKIEDIKIEDYQSYGKLVGKVSV 295 >gi|161723289|ref|NP_110008.2| thymidylate synthase [Mycoplasma pneumoniae M129] gi|2501428|sp|P78029|TYSY_MYCPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|301633474|gb|ADK87028.1| thymidylate synthase [Mycoplasma pneumoniae FH] Length = 287 Score = 291 bits (745), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 139/293 (47%), Positives = 190/293 (64%), Gaps = 35/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL R+V++ G R +RT FGYQM FD+SK FPLLTTKKVHWKS+VHELL Sbjct: 1 MQQYLDLARYVLEHGKYRPNRTDTAGIGVFGYQMHFDISKHFPLLTTKKVHWKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL + V+IW+EW A + G LG Sbjct: 61 WFIKGDTNIKYLVDNKVNIWNEWPYESFKKSPHFNGESQKEFIERIRQDAKFAQQFGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D N +DQ+ ++ ++ +P+SRR IVS+WN +D+M LPPCH L+Q Sbjct: 121 PVYGKQWR-----DFNGVDQLKKVIAQIKVNPFSRRLIVSSWNPNEVDQMLLPPCHSLYQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV +G+LSCQLYQRSGD+FLGIPFNIASYSLL ++A + G F+HT+GD H+Y N Sbjct: 176 FYVQDGQLSCQLYQRSGDIFLGIPFNIASYSLLVYLVAKETNLKPGSFVHTIGDAHIYEN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ LQL+R P+ LP++++ + + ++++D L Y+ H I +V+V Sbjct: 236 HLEQIKLQLTRQPKPLPKVVLKSD-KSIFDYQFDDIELVDYDHHPTIKGEVAV 287 >gi|227510321|ref|ZP_03940370.1| thymidylate synthase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189973|gb|EEI70040.1| thymidylate synthase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 317 Score = 291 bits (745), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L ++V++ G + DRT GT STFGYQMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 7 YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 67 RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYTGPDMTNFSHRAQEDPDFNNLYQEQKKRF 126 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G IDQI +++ ++ P SRR IVSAW Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV++GKLSCQLYQRSGD+FLG+PFNIASY+LLT ++A Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGVPFNIASYALLTSLIARECH 246 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEF+HTLGD H+Y NH EQ QLSR P PQ+ +NP L F D +++Y+ Sbjct: 247 LQPGEFVHTLGDAHIYLNHVEQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306 Query: 254 PHAAILAKVSV 264 P+ +I A V+V Sbjct: 307 PYPSIKAPVAV 317 >gi|227524472|ref|ZP_03954521.1| thymidylate synthase [Lactobacillus hilgardii ATCC 8290] gi|227088342|gb|EEI23654.1| thymidylate synthase [Lactobacillus hilgardii ATCC 8290] Length = 317 Score = 291 bits (745), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L ++V++ G + DRT GT STFGYQMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 7 YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 67 RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYIGPDMTNFSHRAQENPDFNDLYQEQKKRF 126 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G IDQI +++ ++ P SRR IVSAW Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV++GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGIPFNIASYALLTSLIARECN 246 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEF+HTLGD H+Y NH +Q QLSR P PQ+ +NP L F D +++Y+ Sbjct: 247 LQPGEFVHTLGDAHIYLNHVKQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306 Query: 254 PHAAILAKVSV 264 P+ +I A V+V Sbjct: 307 PYPSIKAPVAV 317 >gi|323339894|ref|ZP_08080163.1| thymidylate synthase [Lactobacillus ruminis ATCC 25644] gi|323092767|gb|EFZ35370.1| thymidylate synthase [Lactobacillus ruminis ATCC 25644] Length = 319 Score = 291 bits (744), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 147/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+R ++ G + DRT GT S FGYQMRFDL KGFPLLTTKKV + ELLWFL Sbjct: 9 YLQLIRDILDHGHRKDDRTKTGTISLFGYQMRFDLGKGFPLLTTKKVPLGLIKSELLWFL 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ YL +H IWDEWA Sbjct: 69 NGDTNIQYLLKHKNHIWDEWAFKKWVESDEYEGPDMTDFGLRCQKDPEFDKVYREQMKLF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W +G IDQI ++++ ++ +P SRR IV+AW Sbjct: 129 CDRMVNDDEFAKKYGDLGNVYGAQWRHWKTSNGETIDQIKNVIEEIKTNPDSRRLIVTAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV+NGKLSCQLYQRSGDVFLG+PFNIASYSLLT ++A G Sbjct: 189 NPEDVPTSALPPCHSLFQFYVNNGKLSCQLYQRSGDVFLGVPFNIASYSLLTHLIARECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y+NH EQ QL R+P+ P + +NP L F +D + Y+ Sbjct: 249 LEVGEFVHTLGDAHIYSNHIEQVKEQLKRTPKKAPTLWLNPEKKHLEDFDVDDIKVIDYD 308 Query: 254 PHAAILAKVSV 264 P AI A V+V Sbjct: 309 PAPAIKAPVAV 319 >gi|227513328|ref|ZP_03943377.1| thymidylate synthase [Lactobacillus buchneri ATCC 11577] gi|227083201|gb|EEI18513.1| thymidylate synthase [Lactobacillus buchneri ATCC 11577] Length = 317 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 147/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L ++V++ G + DRT GT STFGYQMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 7 YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 67 RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYIGPDMTNFSHRAQEDPDFNDLYQEQKKRF 126 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G IDQI +++ ++ P SRR IVSAW Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV++GKLSCQLYQRSGD+FLG+PFNIASY+LLT ++A Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGVPFNIASYALLTSLIARECN 246 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEF+HTLGD H+Y NH +Q QLSR P PQ+ +NP L F D +++Y+ Sbjct: 247 LQPGEFVHTLGDAHIYLNHVKQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306 Query: 254 PHAAILAKVSV 264 P+ +I A V+V Sbjct: 307 PYPSIKAPVAV 317 >gi|319892428|ref|YP_004149303.1| Thymidylate synthase [Staphylococcus pseudintermedius HKU10-03] gi|317162124|gb|ADV05667.1| Thymidylate synthase [Staphylococcus pseudintermedius HKU10-03] Length = 317 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 189/311 (60%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL + +++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V EL+WF+ Sbjct: 8 YHDLCKEILEIGNQRDDRTATGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELIWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ YL ++ +IW+EWA Sbjct: 68 RGDTNLRYLLQYNNNIWNEWAFEKYVQSEDYTGPDMTDFGHRAQSDAAFAETYREEMTKF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W DG DQ+ ++++ ++A+P SRRHI+SAW Sbjct: 128 KQQILTDDDFMKKHGDLGNVYGKQWRNWVSADGQQYDQLKALIEQIKANPNSRRHIISAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I+ MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIASYSLLT ++A G Sbjct: 188 NPTEIETMALPPCHTLFQFYVQDNKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKECG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+RS P++ IN + + YED + +YE Sbjct: 248 LEVGEFVHTFGDAHIYSNHLDAVKTQLARSSFAPPELKINTD-RSIFDIEYEDLEIVNYE 306 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 307 SHPAIKAPIAV 317 >gi|304385033|ref|ZP_07367379.1| thymidylate synthase [Pediococcus acidilactici DSM 20284] gi|304329227|gb|EFL96447.1| thymidylate synthase [Pediococcus acidilactici DSM 20284] Length = 323 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R+V++ G + DRT GT STFGYQMRFDLS+GFPLLTTK+V + + EL+W Sbjct: 11 EQYLNLERYVLENGHQKSDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELMW 70 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------DKD---------- 87 FL+GD+N+ YL +H IWDEWA D D Sbjct: 71 FLKGDTNIRYLLQHKNHIWDEWAFKKWVESAEYDGPDMTNFGHRSLIDSDFNAQYQVQKD 130 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G+LG +YG QWR+W G IDQI +++ ++ P SRR IV+ Sbjct: 131 RFTKLILEDDAFAAKYGDLGNVYGSQWRAWKTSTGETIDQIENVIDLIKNHPDSRRMIVT 190 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLT M+A Sbjct: 191 AWNPEDVPTAALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGVPFNIASYALLTAMIAKT 250 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y+NH Q QL+R PR P++ N ++ + D + Sbjct: 251 CGLEVGEFVHTLGDAHIYSNHIAQVKEQLTRDPRPAPRLKFNQVHENIFDYEPADIVVEG 310 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 311 YDPHPAIKAPVAV 323 >gi|308180682|ref|YP_003924810.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046173|gb|ADN98716.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 316 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 6 YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 GD+N+ YL +H IWDEWA K+ Sbjct: 66 HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFASIYQAQMQTF 125 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W G IDQI+++++ ++ P SRR IVSAW Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD H+Y NH EQ QL+R PR PQ+ ++ + ++ D L Y+ Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305 Query: 254 PHAAILAKVSV 264 P AI A V++ Sbjct: 306 PAPAIKAPVAI 316 >gi|254556739|ref|YP_003063156.1| thymidylate synthase [Lactobacillus plantarum JDM1] gi|254045666|gb|ACT62459.1| thymidylate synthase [Lactobacillus plantarum JDM1] Length = 316 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 6 YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 GD+N+ YL +H IWDEWA K+ Sbjct: 66 HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFAPIYQAQIQAF 125 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W G IDQI+++++ ++ P SRR IVSAW Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD H+Y NH EQ QL+R PR PQ+ ++ + ++ D L Y+ Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305 Query: 254 PHAAILAKVSV 264 P AI A V++ Sbjct: 306 PAPAIKAPVAI 316 >gi|227875722|ref|ZP_03993850.1| thymidylate synthase [Mobiluncus mulieris ATCC 35243] gi|269976729|ref|ZP_06183705.1| thymidylate synthase [Mobiluncus mulieris 28-1] gi|307700267|ref|ZP_07637307.1| thymidylate synthase [Mobiluncus mulieris FB024-16] gi|227843664|gb|EEJ53845.1| thymidylate synthase [Mobiluncus mulieris ATCC 35243] gi|269935094|gb|EEZ91652.1| thymidylate synthase [Mobiluncus mulieris 28-1] gi|307614478|gb|EFN93707.1| thymidylate synthase [Mobiluncus mulieris FB024-16] Length = 266 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 136/263 (51%), Positives = 184/263 (69%), Gaps = 2/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DLLR +++ G + DRTG GTRS F Q+R+DLS+GFP +TTK ++W VV ELLW Sbjct: 6 HQYEDLLREILREGVPKDDRTGTGTRSLFARQLRYDLSQGFPAITTKSLYWHGVVGELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G++N ++L + + IWDEWAD DG LGP+YG QWR+WP G V DQI+ ++++L+ Sbjct: 66 FLQGNTNATWLQENNIHIWDEWADTDGNLGPVYGHQWRAWPTEAGTV-DQIAGLIETLKT 124 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV+ + +MAL PCH FQ +V G+LS Q+YQRS D+FLG+PFNIASY Sbjct: 125 DPSSRRMVVSAWNVSDLPRMALAPCHMFFQCWVGAGRLSLQIYQRSCDMFLGVPFNIASY 184 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA G + GE + T GD H+YNNH Q QLSR P P +I++ + Sbjct: 185 ALLTHMLAQQSGLEVGELVWTGGDCHIYNNHVNQVQEQLSRDPYPFPTLILD-QAQSIDD 243 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + ++ L +Y+ H I A V+V Sbjct: 244 YTFDMIRLENYQHHPRISAPVAV 266 >gi|28378525|ref|NP_785417.1| thymidylate synthase [Lactobacillus plantarum WCFS1] gi|300767470|ref|ZP_07077382.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|38258752|sp|Q88W05|TYSY_LACPL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|28271361|emb|CAD64266.1| thymidylate synthase [Lactobacillus plantarum WCFS1] gi|300495289|gb|EFK30445.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 316 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 6 YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 GD+N+ YL +H IWDEWA K+ Sbjct: 66 HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFAPIYQAQMQTF 125 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W G IDQI+++++ ++ P SRR IVSAW Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD H+Y NH EQ QL+R PR PQ+ ++ + ++ D L Y+ Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305 Query: 254 PHAAILAKVSV 264 P AI A V++ Sbjct: 306 PAPAIKAPVAI 316 >gi|237733928|ref|ZP_04564409.1| thymidylate synthase [Mollicutes bacterium D7] gi|229383009|gb|EEO33100.1| thymidylate synthase [Coprobacillus sp. D7] Length = 286 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 133/289 (46%), Positives = 186/289 (64%), Gaps = 34/289 (11%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 + ++V++ G +R DRTG GTRS FGYQ R+DL GFPL+TTKK+ + + ELLWF++GD Sbjct: 1 MCKYVLENGENREDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFLRPIAEELLWFIKGD 60 Query: 67 SNVSYLHRHGVSIWDEW-----------------------------ADKDGELGPIYGVQ 97 +N+ YL V IW+EW A K G+LGP+YG Q Sbjct: 61 TNIKYLVDRNVKIWNEWPYEDFKKSPDFNGETIEEFVEKIKTDDEFAKKHGDLGPVYGAQ 120 Query: 98 WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--D 155 WR + +Y+G +DQ++ +V SL +P+SRRHI+ AWN A +D MALPPCH QFYV D Sbjct: 121 WRDF-NYEG--VDQLAKLVDSLTNNPFSRRHIICAWNPAQVDNMALPPCHAFLQFYVSAD 177 Query: 156 NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 LSCQLYQRS D+FLG+PFNIASY+L+T MLA G++ EFIHT+GD H+Y +HFE Sbjct: 178 KKYLSCQLYQRSADIFLGVPFNIASYALMTEMLARTCGYEAKEFIHTIGDAHIYKDHFEV 237 Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q++R P ++++NP++ + ++ ED + Y+ H ++ KVSV Sbjct: 238 VKQQIAREPLPKCKLVLNPDVKSIFDYKIEDIKIEDYQSHGKLVGKVSV 286 >gi|326432420|gb|EGD77990.1| thymidylate synthase [Salpingoeca sp. ATCC 50818] Length = 293 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 137/283 (48%), Positives = 187/283 (66%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 H+YL L++ ++ G R DRTG GT S FG QMRF L +GFPLLTTK+V W+ V+ ELLW Sbjct: 11 HEYLRLVQRILDTGKTRSDRTGTGTISLFGAQMRFSLREGFPLLTTKRVFWRGVLEELLW 70 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+ GD+N ++L V IWD K+ G+LGP+YG QWR + Sbjct: 71 FIAGDTNANHLAEKKVHIWDANGSKEFLEQRGLGHREEGDLGPVYGFQWRHFGAQYTDMH 130 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQI+++++ ++ +P SRR I+SAWN + MALPPCH L QFYV +G+LSC Sbjct: 131 ADYQGKGVDQIANVIEQIKTNPDSRRIIMSAWNPVDLPHMALPPCHVLAQFYVQDGELSC 190 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT+M+A V G + G+F+HT+GD H+Y+NH + QL+ Sbjct: 191 QLYQRSADMGLGVPFNIASYSLLTVMIAHVCGLRPGDFVHTIGDAHVYSNHVDALKEQLT 250 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I ++ + F+ EDF L Y+PH I K++V Sbjct: 251 REPRPFPTLNIKRDVTSIDDFKAEDFELVGYKPHGKIAMKMAV 293 >gi|191638380|ref|YP_001987546.1| thymidylate synthase [Lactobacillus casei BL23] gi|190712682|emb|CAQ66688.1| Thymidylate synthase (TS) (TSase) [Lactobacillus casei BL23] gi|327382408|gb|AEA53884.1| Thymidylate synthase [Lactobacillus casei LC2W] gi|327385609|gb|AEA57083.1| Thymidylate synthase [Lactobacillus casei BD-II] Length = 316 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 147/311 (47%), Positives = 189/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVRFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 66 RGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q G+FIHT GD HLY NH +Q QL+R+PR P +++NP+ D+ F +D L +Y+ Sbjct: 246 LQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|314933617|ref|ZP_07840982.1| thymidylate synthase [Staphylococcus caprae C87] gi|313653767|gb|EFS17524.1| thymidylate synthase [Staphylococcus caprae C87] Length = 318 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYVNSEDYQGPDMTNFGHRSQEDPEFNEQYKKEMKKF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KERILNDDEFARQYGDLGNVYGKQWRDWEDKDGNHYDQLKTVIEQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I+ MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIETMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QLSR P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHMSAIETQLSRESYKAPTLQINSD-KSIFDINYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|330967045|gb|EGH67305.1| thymidylate synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 277 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 137/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V++ G+ + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+ Sbjct: 1 MKSYLDLLGDVLENGAQKGDRTGTGTISVFGRQFRHDLSKGFPLLTTKKLHFKSIVNELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV +L+ +GV IW+EWA ++G+LGP+YG QW +WP DG I+QI +V +L+ Sbjct: 61 WFLGGDTNVKWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + KMALPPCH L+QFYV + KLS L+ RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENARQGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+P+N AS + LT MLA GE + +L DVH+Y+NH EQ QL+R PR L Sbjct: 181 SDTFLGLPYNTASLACLTHMLAQQCDLDVGEIVISLSDVHIYSNHMEQVKTQLTREPRQL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ + + +++EDF + Y+PH I A VS+ Sbjct: 241 PELKLLRKPASIYDYKFEDFEVVGYDPHPHIAAPVSI 277 >gi|308799723|ref|XP_003074642.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 / DHFR-TS (ISS) [Ostreococcus tauri] gi|116000813|emb|CAL50493.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 / DHFR-TS (ISS) [Ostreococcus tauri] Length = 751 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 133/283 (46%), Positives = 184/283 (65%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYLD++R +I G+ + DRTG GT STFG QMRFDL + FPLLTTK+V W+ V ELLW Sbjct: 469 HQYLDMIREIIDQGAVKGDRTGTGTISTFGNQMRFDLRRSFPLLTTKRVFWRGVAEELLW 528 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+ G++N + L ++IWD ++ G+LGP+YG QWR + Sbjct: 529 FVAGETNANKLAEKKINIWDGNGSREYLDSIGLTEREVGDLGPVYGFQWRHFGAEYTNMH 588 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ +P RR +++AWN A + +MALPPCH QFYV NG+LSC Sbjct: 589 ADYTGKGVDQLAEVINKIKNNPTDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSC 648 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V + G+F+H GD H+Y+NH E QL+ Sbjct: 649 QMYQRSCDMGLGVPFNIASYSLLTCMIAQVCDLKPGDFVHVCGDTHVYSNHVEPLKKQLT 708 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P + INP D+ SF ++DF + Y+PH I K++V Sbjct: 709 CEPRPFPILKINPEKKDIDSFTFDDFEIIGYDPHPKIEMKMAV 751 >gi|282916694|ref|ZP_06324452.1| thymidylate synthase [Staphylococcus aureus subsp. aureus D139] gi|283770498|ref|ZP_06343390.1| thymidylate synthase [Staphylococcus aureus subsp. aureus H19] gi|282319181|gb|EFB49533.1| thymidylate synthase [Staphylococcus aureus subsp. aureus D139] gi|283460645|gb|EFC07735.1| thymidylate synthase [Staphylococcus aureus subsp. aureus H19] Length = 318 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 187/311 (60%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + +YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVNYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|116494873|ref|YP_806607.1| thymidylate synthase [Lactobacillus casei ATCC 334] gi|122263709|sp|Q039F7|TYSY_LACC3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116105023|gb|ABJ70165.1| thymidylate synthase [Lactobacillus casei ATCC 334] Length = 316 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 147/311 (47%), Positives = 189/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 66 RGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q G+FIHT GD HLY NH +Q QL+R+PR P +++NP+ D+ F +D L +Y+ Sbjct: 246 LQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|332686569|ref|YP_004456343.1| thymidylate synthase [Melissococcus plutonius ATCC 35311] gi|332370578|dbj|BAK21534.1| thymidylate synthase [Melissococcus plutonius ATCC 35311] Length = 315 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L R ++ G + DRTG GT S FGYQMRF+LS GFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGREILTNGEAKEDRTGTGTLSIFGYQMRFNLSTGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ +L + IWDEWA Sbjct: 65 KGDTNIRFLLENNNHIWDEWAFERYTKSPDYIGPDMTNFGQRVLTDSKFSEIYQEQHQLF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 + GELG IYG QWR W G IDQ++ +++ ++ P SRR IVSAW Sbjct: 125 CNKILTDDEFAQQYGELGNIYGAQWRRWQTKSGKFIDQLTQVIEMIKKTPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I MALPPCH LFQFYV + KLSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEEIPSMALPPCHTLFQFYVSHNKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GDVHLY NH +Q + QL+R P+ LP +++N + F D + +Y+ Sbjct: 245 LEVGEFVHTFGDVHLYKNHIDQMNEQLTRKPKQLPTLVLNTTKTSIFDFDMADIKVENYQ 304 Query: 254 PHAAILAKVSV 264 P+ AI A ++V Sbjct: 305 PYPAIKAPIAV 315 >gi|322639437|gb|EFY36125.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] Length = 220 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 128/220 (58%), Positives = 167/220 (75%) Query: 45 LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY 104 +TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP Sbjct: 1 MTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTP 60 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 DG IDQI++++ L+ DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLY Sbjct: 61 DGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLY 120 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LL M+A G+F+ T GD HLY+NH EQ LQLSR P Sbjct: 121 QRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREP 180 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R LP+++I L +R++DF + Y+PH I A V++ Sbjct: 181 RALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 220 >gi|81428612|ref|YP_395612.1| thymidylate synthase [Lactobacillus sakei subsp. sakei 23K] gi|123755841|sp|Q38WX8|TYSY_LACSS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|78610254|emb|CAI55303.1| Thymidylate synthase [Lactobacillus sakei subsp. sakei 23K] Length = 316 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 147/311 (47%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R +++ G + DRT GT S FGYQMRF+L +GFPLLTTKK+ + + ELLWFL Sbjct: 6 YLDLARTILEEGHYKGDRTNTGTYSLFGYQMRFNLQEGFPLLTTKKMPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA------------------------DKD------------ 87 +GDSN+ YL +H IWDEWA D D Sbjct: 66 KGDSNIRYLLQHNNHIWDEWAFERFVKSTDYTGPDMTDFSHRAQDDADFKVVYQEQMRLF 125 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 GELG IYG QWR+W G IDQI ++++ ++ +P SRR IVSAW Sbjct: 126 NDRILADEGFAKQYGELGDIYGKQWRAWQTRSGETIDQIKNVIEMIKTNPDSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV++GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y+NH Q QL+RS P++ +NP+ + F D + +YE Sbjct: 246 LEVGEFIHTLGDAHIYSNHVTQVKTQLARSMHAAPKLWLNPDKKSIFDFDVADIKVENYE 305 Query: 254 PHAAILAKVSV 264 AI A V+V Sbjct: 306 SEPAIKAPVAV 316 >gi|323464469|gb|ADX76622.1| thymidylate synthase [Staphylococcus pseudintermedius ED99] Length = 317 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 140/311 (45%), Positives = 188/311 (60%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL + +++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V EL+WF+ Sbjct: 8 YHDLCKEILEIGNQRDDRTATGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELIWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ YL ++ +IW+EWA Sbjct: 68 RGDTNLRYLLQYNNNIWNEWAFEKYVQSEDYTGPDMTDFGHRAQSDAAFAETYREEMTKF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W DG DQ+ ++++ ++ +P SRRHI+SAW Sbjct: 128 KQQILTDDDFMKKHGDLGNVYGKQWRNWVSADGQQYDQLKALIEQIKTNPNSRRHIISAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I+ MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIASYSLLT ++A G Sbjct: 188 NPTEIETMALPPCHTLFQFYVQDNKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKECG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+RS P++ IN + + YED + +YE Sbjct: 248 LEVGEFVHTFGDAHIYSNHLDAVKTQLARSSFAPPELKINTD-RSIFDIEYEDLEIVNYE 306 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 307 SHPAIKAPIAV 317 >gi|300871809|ref|YP_003786682.1| thymidylate synthase [Brachyspira pilosicoli 95/1000] gi|300689510|gb|ADK32181.1| thymidylate synthase [Brachyspira pilosicoli 95/1000] Length = 266 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 138/266 (51%), Positives = 181/266 (68%), Gaps = 2/266 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 M YL+LL+ V++ G D +DRTGVGTR F Q+RF P++TTK+V K V+ EL Sbjct: 1 MKNYLELLKKVLEEGEDTKDRTGVGTRRIFAPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 LWFL+G +N+ +L + V IWDEWAD GELGP+YG QWR+W +GN IDQIS++V +L Sbjct: 61 LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNVVNTL 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNI 178 R +P SRR+I++AWNV IDKM LPPCH + QF+V+N G + LYQRS D+FLG+PFNI Sbjct: 121 RNNPTSRRNILNAWNVGEIDKMHLPPCHMMCQFFVNNEGGIITHLYQRSADLFLGVPFNI 180 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 +SY++LT +LA G + E I T GD H+YNNH EQ LQLSR P + + Sbjct: 181 SSYAILTRLLAMHSGLKASELIMTFGDAHIYNNHMEQVKLQLSREPYEQTTELFIEERPN 240 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + S YEDF L Y+ H I A+V+V Sbjct: 241 IFSHVYEDFRLEGYKYHPTIKAEVAV 266 >gi|329731575|gb|EGG67937.1| thymidylate synthase [Staphylococcus epidermidis VCU144] Length = 318 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G LG +YG QWR W D +GN DQ+ +++Q ++ +P SRRHIVSAW Sbjct: 129 KERILNNDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKTVIQQIKNNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N A ID MALPPCH +FQFYV GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPAEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLNINTD-KSIFDINYEDLELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|302333040|gb|ADL23233.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JKD6159] Length = 318 Score = 288 bits (737), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDNTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|242242714|ref|ZP_04797159.1| thymidylate synthase [Staphylococcus epidermidis W23144] gi|242233850|gb|EES36162.1| thymidylate synthase [Staphylococcus epidermidis W23144] Length = 318 Score = 288 bits (737), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYVQSNDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G LG +YG QWR W D +GN DQ+ S++Q ++ +P SRRHIVSAW Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKNNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRESYLPPQLKINTD-KSIFDINYEDLELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|27468038|ref|NP_764675.1| thymidylate synthase [Staphylococcus epidermidis ATCC 12228] gi|33416238|ref|NP_877984.1| thymidylate synthase [Staphylococcus aureus] gi|42761440|ref|NP_976285.1| thymidylate synthase [Staphylococcus epidermidis] gi|57866926|ref|YP_188580.1| thymidylate synthase [Staphylococcus epidermidis RP62A] gi|57867484|ref|YP_189147.1| thymidylate synthase [Staphylococcus epidermidis RP62A] gi|221142630|ref|ZP_03567123.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|226464437|ref|YP_002790944.1| thymidylate synthase [Staphylococcus aureus] gi|227519931|ref|ZP_03949980.1| thymidylate synthase [Enterococcus faecalis TX0104] gi|251810861|ref|ZP_04825334.1| thymidylate synthase [Staphylococcus epidermidis BCM-HMP0060] gi|282876133|ref|ZP_06285000.1| thymidylate synthase [Staphylococcus epidermidis SK135] gi|282929387|ref|ZP_06336949.1| thymidylate synthase [Staphylococcus aureus A9765] gi|293366599|ref|ZP_06613276.1| thymidylate synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|302344744|ref|YP_003813114.1| thymidylate synthetase [Staphylococcus aureus] gi|59800406|sp|P0A0M5|TYSY_STAAU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901169|sp|Q5HMP6|TYSY_STAEQ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|82583715|sp|P0C0M5|TYSY_STAES RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|27315583|gb|AAO04717.1|AE016747_214 thymidylate synthase [Staphylococcus epidermidis ATCC 12228] gi|1762089|gb|AAC18954.1| ThyE [Staphylococcus epidermidis] gi|3676410|gb|AAC63226.1| thymidylate synthetase ThyE [Staphylococcus aureus] gi|13383308|dbj|BAB39485.1| thymidylate synthetase [Staphylococcus epidermidis] gi|33390922|gb|AAQ17128.1| thymidylate synthase [Staphylococcus aureus] gi|57637584|gb|AAW54372.1| thymidylate synthase [Staphylococcus epidermidis RP62A] gi|57638142|gb|AAW54930.1| thymidylate synthase [Staphylococcus epidermidis RP62A] gi|226434324|emb|CAR62446.1| thymidylate synthase ThyE [Staphylococcus aureus] gi|227072621|gb|EEI10584.1| thymidylate synthase [Enterococcus faecalis TX0104] gi|251805541|gb|EES58198.1| thymidylate synthase [Staphylococcus epidermidis BCM-HMP0060] gi|270299881|gb|ACZ68687.1| Thymidylate synthase [Staphylococcus aureus] gi|270300524|gb|ACZ69330.1| thymidylate synthase [Staphylococcus aureus] gi|281295158|gb|EFA87685.1| thymidylate synthase [Staphylococcus epidermidis SK135] gi|281334254|gb|ADA61338.1| Thymidylate synthase [Staphylococcus aureus] gi|282166683|gb|ADA80699.1| Thymidylate synthase [Staphylococcus aureus] gi|282591819|gb|EFB96873.1| thymidylate synthase [Staphylococcus aureus A9765] gi|291319368|gb|EFE59737.1| thymidylate synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|300492218|gb|ADK23693.1| thymidylate synthetase [Staphylococcus aureus] gi|302751821|gb|ADL65998.1| thymidylate synthase, ThyA_1 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|329735174|gb|EGG71466.1| thymidylate synthase [Staphylococcus epidermidis VCU045] gi|329737184|gb|EGG73438.1| thymidylate synthase [Staphylococcus epidermidis VCU028] Length = 318 Score = 288 bits (737), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G LG +YG QWR W D +GN DQ+ S++Q ++ +P SRRHIVSAW Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|319400786|gb|EFV89005.1| thymidylate synthase [Staphylococcus epidermidis FRI909] Length = 318 Score = 288 bits (737), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYVQSADYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G LG +YG QWR W D +GN DQ+ S++Q ++ +P SRRHIVSAW Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKNNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRESYLPPQLKINTD-KSIFDINYEDLELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|298694721|gb|ADI97943.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED133] Length = 318 Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYNEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVGYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|283470641|emb|CAQ49852.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ST398] Length = 318 Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLELGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|49483618|ref|YP_040842.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA252] gi|57650383|ref|YP_186311.1| thymidylate synthase [Staphylococcus aureus subsp. aureus COL] gi|82751018|ref|YP_416759.1| thymidylate synthase [Staphylococcus aureus RF122] gi|87160328|ref|YP_494017.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195159|ref|YP_499960.1| thymidylate synthase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221550|ref|YP_001332372.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509594|ref|YP_001575253.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142068|ref|ZP_03566561.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|257425491|ref|ZP_05601916.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428151|ref|ZP_05604549.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430782|ref|ZP_05607164.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 68-397] gi|257433541|ref|ZP_05609899.1| thymidylate synthase [Staphylococcus aureus subsp. aureus E1410] gi|257436382|ref|ZP_05612429.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M876] gi|258422540|ref|ZP_05685448.1| thymidylate synthase [Staphylococcus aureus A9635] gi|258451086|ref|ZP_05699121.1| thymidylate synthase [Staphylococcus aureus A5948] gi|262050396|ref|ZP_06023236.1| thymidylate synthase [Staphylococcus aureus D30] gi|282904009|ref|ZP_06311897.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C160] gi|282905774|ref|ZP_06313629.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908744|ref|ZP_06316562.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911007|ref|ZP_06318809.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914217|ref|ZP_06322004.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M899] gi|282919139|ref|ZP_06326874.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C427] gi|282924322|ref|ZP_06331996.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C101] gi|282927524|ref|ZP_06335141.1| thymidylate synthase [Staphylococcus aureus A9765] gi|283958192|ref|ZP_06375643.1| thymidylate synthase [Staphylococcus aureus subsp. aureus A017934/97] gi|284024427|ref|ZP_06378825.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 132] gi|293501243|ref|ZP_06667094.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 58-424] gi|293510204|ref|ZP_06668912.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M809] gi|293526798|ref|ZP_06671482.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M1015] gi|294850751|ref|ZP_06791469.1| thymidylate synthase [Staphylococcus aureus A9754] gi|295427938|ref|ZP_06820570.1| thymidylate synthase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591097|ref|ZP_06949735.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MN8] gi|304380994|ref|ZP_07363651.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|56749740|sp|Q6GGY0|TYSY_STAAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901166|sp|Q5HFZ6|TYSY_STAAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123291799|sp|Q2FYK5|TYSY_STAA8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123763295|sp|Q2FH11|TYSY_STAA3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123768559|sp|Q2YY40|TYSY_STAAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172048885|sp|A6QGX8|TYSY_STAAE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036949|sp|A8Z406|TYSY_STAAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|49241747|emb|CAG40437.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA252] gi|57284569|gb|AAW36663.1| thymidylate synthase [Staphylococcus aureus subsp. aureus COL] gi|82656549|emb|CAI80971.1| thymidylate synthase [Staphylococcus aureus RF122] gi|87126302|gb|ABD20816.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202717|gb|ABD30527.1| thymidylate synthase, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374350|dbj|BAF67610.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368403|gb|ABX29374.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257271948|gb|EEV04086.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274992|gb|EEV06479.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278910|gb|EEV09529.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 68-397] gi|257281634|gb|EEV11771.1| thymidylate synthase [Staphylococcus aureus subsp. aureus E1410] gi|257284664|gb|EEV14784.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M876] gi|257847297|gb|EEV71303.1| thymidylate synthase [Staphylococcus aureus A9635] gi|257861141|gb|EEV83954.1| thymidylate synthase [Staphylococcus aureus A5948] gi|259161515|gb|EEW46117.1| thymidylate synthase [Staphylococcus aureus D30] gi|269940922|emb|CBI49306.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TW20] gi|282313709|gb|EFB44102.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C101] gi|282316949|gb|EFB47323.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C427] gi|282322285|gb|EFB52609.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M899] gi|282324702|gb|EFB55012.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327008|gb|EFB57303.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331066|gb|EFB60580.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Btn1260] gi|282592064|gb|EFB97090.1| thymidylate synthase [Staphylococcus aureus A9765] gi|282595627|gb|EFC00591.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C160] gi|283790341|gb|EFC29158.1| thymidylate synthase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920356|gb|EFD97420.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M1015] gi|291096248|gb|EFE26509.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 58-424] gi|291467148|gb|EFF09666.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M809] gi|294822391|gb|EFG38842.1| thymidylate synthase [Staphylococcus aureus A9754] gi|295128296|gb|EFG57930.1| thymidylate synthase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575983|gb|EFH94699.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MN8] gi|302751257|gb|ADL65434.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340470|gb|EFM06407.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438170|gb|ADQ77241.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH60] gi|315195323|gb|EFU25710.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS00] gi|315195862|gb|EFU26230.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS01] gi|320140327|gb|EFW32184.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA131] gi|320142672|gb|EFW34475.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA177] gi|323438443|gb|EGA96197.1| thymidylate synthase [Staphylococcus aureus O11] gi|323444081|gb|EGB01692.1| thymidylate synthase [Staphylococcus aureus O46] gi|329314104|gb|AEB88517.1| Thymidylate synthase [Staphylococcus aureus subsp. aureus T0131] gi|329730552|gb|EGG66938.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21189] Length = 318 Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|15924417|ref|NP_371951.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu50] gi|15927008|ref|NP_374541.1| thymidylate synthase [Staphylococcus aureus subsp. aureus N315] gi|21283046|ref|NP_646134.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MW2] gi|49486268|ref|YP_043489.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MSSA476] gi|148267914|ref|YP_001246857.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH9] gi|150393977|ref|YP_001316652.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH1] gi|156979746|ref|YP_001442005.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu3] gi|253315250|ref|ZP_04838463.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732066|ref|ZP_04866231.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733326|ref|ZP_04867491.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH130] gi|255006216|ref|ZP_05144817.2| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795518|ref|ZP_05644497.1| thymidylate synthase [Staphylococcus aureus A9781] gi|258413327|ref|ZP_05681603.1| thymidylate synthase [Staphylococcus aureus A9763] gi|258420567|ref|ZP_05683509.1| thymidylate synthase [Staphylococcus aureus A9719] gi|258434662|ref|ZP_05688736.1| thymidylate synthase [Staphylococcus aureus A9299] gi|258444762|ref|ZP_05693091.1| thymidylate synthase [Staphylococcus aureus A8115] gi|258447404|ref|ZP_05695548.1| thymidylate synthase [Staphylococcus aureus A6300] gi|258449245|ref|ZP_05697348.1| thymidylate synthase [Staphylococcus aureus A6224] gi|258454623|ref|ZP_05702587.1| thymidylate synthase [Staphylococcus aureus A5937] gi|269203049|ref|YP_003282318.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED98] gi|282892921|ref|ZP_06301156.1| thymidylate synthase [Staphylococcus aureus A8117] gi|282927952|ref|ZP_06335561.1| thymidylate synthase [Staphylococcus aureus A10102] gi|295406371|ref|ZP_06816178.1| thymidylate synthase [Staphylococcus aureus A8819] gi|296275287|ref|ZP_06857794.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MR1] gi|297207915|ref|ZP_06924348.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244600|ref|ZP_06928483.1| thymidylate synthase [Staphylococcus aureus A8796] gi|300911999|ref|ZP_07129442.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH70] gi|54039797|sp|P67047|TYSY_STAAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54039798|sp|P67048|TYSY_STAAW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54042283|sp|P67046|TYSY_STAAM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|56749711|sp|Q6G9D4|TYSY_STAAS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231737|sp|A7X2B3|TYSY_STAA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036947|sp|A6U1P7|TYSY_STAA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036948|sp|A5ISV8|TYSY_STAA9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|13701225|dbj|BAB42520.1| thymidylate synthase [Staphylococcus aureus subsp. aureus N315] gi|14247198|dbj|BAB57589.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu50] gi|21204485|dbj|BAB95182.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MW2] gi|49244711|emb|CAG43146.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MSSA476] gi|147740983|gb|ABQ49281.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH9] gi|149946429|gb|ABR52365.1| Thymidylate synthase [Staphylococcus aureus subsp. aureus JH1] gi|156721881|dbj|BAF78298.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu3] gi|253724199|gb|EES92928.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728678|gb|EES97407.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH130] gi|257789490|gb|EEV27830.1| thymidylate synthase [Staphylococcus aureus A9781] gi|257839891|gb|EEV64359.1| thymidylate synthase [Staphylococcus aureus A9763] gi|257843515|gb|EEV67922.1| thymidylate synthase [Staphylococcus aureus A9719] gi|257849023|gb|EEV73005.1| thymidylate synthase [Staphylococcus aureus A9299] gi|257850255|gb|EEV74208.1| thymidylate synthase [Staphylococcus aureus A8115] gi|257853595|gb|EEV76554.1| thymidylate synthase [Staphylococcus aureus A6300] gi|257857233|gb|EEV80131.1| thymidylate synthase [Staphylococcus aureus A6224] gi|257863006|gb|EEV85770.1| thymidylate synthase [Staphylococcus aureus A5937] gi|262075339|gb|ACY11312.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED98] gi|282590249|gb|EFB95329.1| thymidylate synthase [Staphylococcus aureus A10102] gi|282764918|gb|EFC05043.1| thymidylate synthase [Staphylococcus aureus A8117] gi|285817105|gb|ADC37592.1| Thymidylate synthase [Staphylococcus aureus 04-02981] gi|294968959|gb|EFG44981.1| thymidylate synthase [Staphylococcus aureus A8819] gi|296887489|gb|EFH26389.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178630|gb|EFH37876.1| thymidylate synthase [Staphylococcus aureus A8796] gi|300886245|gb|EFK81447.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH70] gi|312829821|emb|CBX34663.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129137|gb|EFT85132.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS03] gi|329727369|gb|EGG63825.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21172] gi|329733414|gb|EGG69746.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21193] Length = 318 Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYNGPDMTDFGHRALSDPEFNEQYKEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|148550243|ref|YP_001270345.1| thymidylate synthase [Pseudomonas putida F1] gi|166231726|sp|A5WAK1|TYSY_PSEP1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148514301|gb|ABQ81161.1| thymidylate synthase [Pseudomonas putida F1] Length = 277 Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 138/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V++ GS + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+ Sbjct: 1 MKSYLDLLTDVLENGSVKGDRTGTGTISVFGRQYRHDLSKGFPLLTTKKLHFKSIVNELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ +L+ +GV IW+EWA ++G+LGP+YG QW +WP DG I+QI +V +L+ Sbjct: 61 WFLSGDTNIKWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + KMALPPCH L+QFYV + KLS L+ RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENAENGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+P+N AS + LT MLA GE + +L DVH+Y+NH EQ Q+SR PR L Sbjct: 181 SDSFLGLPYNTASLACLTHMLAQQCDMGVGEIVISLSDVHIYSNHMEQVKTQISREPRKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ + + +++EDF L Y+PH I A VS+ Sbjct: 241 PELKLLRKPESIYDYKFEDFELVGYDPHPHIAAPVSI 277 >gi|227535130|ref|ZP_03965179.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187175|gb|EEI67242.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 328 Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 189/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 18 YLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSEGFPLLTTKKVPYGLIKSELLWFL 77 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 78 RGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMAKF 137 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 138 DERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVSAW 197 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 198 NPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 257 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q G+FIHT GD HLY NH +Q QL+R+PR P +++NP+ D+ F +D L +Y+ Sbjct: 258 LQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLNYD 317 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 318 PYPAIKAPVAV 328 >gi|270291285|ref|ZP_06197507.1| thymidylate synthase [Pediococcus acidilactici 7_4] gi|270280131|gb|EFA25967.1| thymidylate synthase [Pediococcus acidilactici 7_4] Length = 316 Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 143/313 (45%), Positives = 185/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R+V++ G + DRT GT STFGYQMRFDLS+GFPLLTTK+V + + EL+W Sbjct: 4 EQYLNLERYVLENGHQKSDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELMW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FL+GD+N+ YL +H IWDEWA K Sbjct: 64 FLKGDTNIRYLLQHKNHIWDEWAFKKWVESAEYDGPDMTNFGHRSLIDSDFNAQYQVQKD 123 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G+LG +YG QWR+W G IDQI +++ ++ P SRR IV+ Sbjct: 124 RFTKLILEDDAFAAKYGDLGNVYGSQWRAWKTSTGETIDQIENVIDLIKNHPDSRRMIVT 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLT M+A Sbjct: 184 AWNPEDVPTAALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGVPFNIASYALLTAMIAKT 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y+NH Q QL+R PR P++ N ++ + D + Sbjct: 244 CGLEVGEFVHTLGDAHIYSNHIAQVKEQLARDPRPAPRLKFNQVHENIFDYEPADIVVEG 303 Query: 252 YEPHAAILAKVSV 264 Y+PH I A V+V Sbjct: 304 YDPHPTIKAPVAV 316 >gi|304373440|ref|YP_003856649.1| Thymidylate synthase 2 [Mycoplasma hyorhinis HUB-1] gi|304309631|gb|ADM22111.1| Thymidylate synthase 2 [Mycoplasma hyorhinis HUB-1] Length = 286 Score = 288 bits (736), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 141/293 (48%), Positives = 187/293 (63%), Gaps = 36/293 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+ LRH+++ G + +RT V + +TFGYQMRFDLS+GFPL+TTKK ++ S+ HELL Sbjct: 1 MRQYLEFLRHILQKGIKKTNRTIVDSINTFGYQMRFDLSEGFPLVTTKKTNFASIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL + V+IW+EW A + GELG Sbjct: 61 WFIKGDTNIKYLVDNNVNIWNEWPYENYKKSKEFQGESLKEFIVKIKENPSFAKQFGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ +DQ+ ++Q ++ +P SRR IVSAWN ID M LPPCH LFQ Sbjct: 121 PVYGKQWRNFLG-----VDQLKKVIQEIKTNPNSRRLIVSAWNPLEIDSMLLPPCHSLFQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV N KLSCQLYQRS D FLG+PFNIASYSLL M+A + GEFIHT+GD H+Y N Sbjct: 176 FYVANNKLSCQLYQRSADAFLGVPFNIASYSLLVFMIAQECELEVGEFIHTIGDAHIYVN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +Q +LQL+R P LP++ I ++ED L YE + I +V+V Sbjct: 236 HIDQVNLQLTRIPHKLPKLKITKK--PFFDIQFEDLQLIDYEHDSFIKGEVAV 286 >gi|320533091|ref|ZP_08033824.1| thymidylate synthase [Actinomyces sp. oral taxon 171 str. F0337] gi|320134706|gb|EFW26921.1| thymidylate synthase [Actinomyces sp. oral taxon 171 str. F0337] Length = 297 Score = 288 bits (736), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 141/263 (53%), Positives = 177/263 (67%), Gaps = 2/263 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL V+ G+ + DRTG GTRS F Q+R+DL +GFP +TTK V K+V ELLWFL Sbjct: 35 YENLLADVLTNGTSKSDRTGTGTRSLFARQLRYDLGRGFPRITTKFVAMKAVKGELLWFL 94 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+NV +L G++IWDEWAD GELGP+YG QWRSWP DG VIDQIS ++ +LR DP Sbjct: 95 RGDTNVGWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGVIDQISGLIDTLRTDP 154 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + MAL PCH FQ Y G+LS Q+YQRS D+FLG+PFNIASY+L Sbjct: 155 DSRRMLVSAWNVSELGSMALAPCHAFFQCYAAEGRLSLQIYQRSADLFLGVPFNIASYAL 214 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SF 242 LT MLA + GE I T GD H+Y+NH EQ QLSR P P + + + ++ Sbjct: 215 LTHMLAQQADLEPGELIWTGGDCHIYDNHVEQVRTQLSRVPSAHPFPTLRLERAESIDAY 274 Query: 243 RYEDF-TLRSYEPHAAILAKVSV 264 +D + YE H I A V+V Sbjct: 275 DMDDIDASQGYEHHPTIKAPVAV 297 >gi|116492833|ref|YP_804568.1| thymidylate synthase [Pediococcus pentosaceus ATCC 25745] gi|122265703|sp|Q03F96|TYSY_PEDPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116102983|gb|ABJ68126.1| thymidylate synthase [Pediococcus pentosaceus ATCC 25745] Length = 316 Score = 288 bits (736), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R+V++ G + DRT GT STFGYQMRFDLS+GFPLLTTK+V + + ELLW Sbjct: 4 EQYLNLERYVLENGHLKGDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FL+GD+N+ YL +H IWDEWA K Sbjct: 64 FLKGDTNIRYLLQHNNHIWDEWAFKKWVESDEYQGPDMTDFGHRSLTDPEFNELYKIEKQ 123 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G+LG +YG QWR+W G IDQIS+++ ++ +P SRR IVS Sbjct: 124 RFTEQILEDDTFSAKYGDLGNVYGSQWRAWKTSTGETIDQISNVIDMIKNNPNSRRMIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTSALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYALLTELIAKA 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT+GD H+Y+NH +Q QL R+PR P++ + + D + Sbjct: 244 TGLEVGEFIHTIGDAHIYSNHLDQVKEQLERTPRPAPKLKFKQVHDSIFDYEPGDIVVEG 303 Query: 252 YEPHAAILAKVSV 264 Y+PH I A V+V Sbjct: 304 YDPHPTIKAPVAV 316 >gi|329945997|ref|ZP_08293684.1| thymidylate synthase [Actinomyces sp. oral taxon 170 str. F0386] gi|328528445|gb|EGF55423.1| thymidylate synthase [Actinomyces sp. oral taxon 170 str. F0386] Length = 296 Score = 287 bits (735), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 140/263 (53%), Positives = 177/263 (67%), Gaps = 2/263 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL V+ G+ + DRTG GT S F Q+R+DL++GFP +TTK V K+V ELLWFL Sbjct: 34 YENLLADVLTNGALKSDRTGTGTHSLFARQLRYDLARGFPRITTKFVAMKAVKGELLWFL 93 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+NV +L G++IWDEWAD GELGP+YG QWRSWP DG IDQI+ ++ +LR DP Sbjct: 94 RGDTNVRWLQERGITIWDEWADNAGELGPVYGSQWRSWPTCDGGAIDQIAGLINTLRTDP 153 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + MAL PCH FQ Y +G+LS Q+YQRS D+FLG+PFNIASY+L Sbjct: 154 DSRRMLVSAWNVSDLSSMALAPCHAFFQCYAADGRLSLQIYQRSADLFLGVPFNIASYAL 213 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-PNIVDLLSF 242 LT MLA G GE + T GD H+YNNH EQ QLSR P P + + ++ Sbjct: 214 LTHMLAQQAGLDPGELVWTGGDCHIYNNHVEQVRTQLSRVPSAYPFPTLRLERAASIDAY 273 Query: 243 RYEDF-TLRSYEPHAAILAKVSV 264 +D + YE H AI A V+V Sbjct: 274 DMDDIDASQGYEHHPAIKAPVAV 296 >gi|145346608|ref|XP_001417778.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578006|gb|ABO96071.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 499 Score = 287 bits (735), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 132/283 (46%), Positives = 186/283 (65%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++R +I G+ + DRTG GT STFG QMRFDL + FPLLTTK+V W+ V ELLW Sbjct: 217 YQYLEMIREIIDQGAVKGDRTGTGTISTFGNQMRFDLRRSFPLLTTKRVFWRGVAEELLW 276 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+ G++N + L ++IWD ++ G+LGP+YG QWR + Sbjct: 277 FVAGETNANKLAEKKINIWDGNGSREYLDSIGLTEREVGDLGPVYGFQWRHFGAEYTNMH 336 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ +P RR +++AWN A + +MALPPCH QFYV NG+LSC Sbjct: 337 ADYTGKGVDQLAEVIHKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSC 396 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H GD H+Y+NH E + QL+ Sbjct: 397 QMYQRSCDMGLGVPFNIASYSLLTCMIAQVCGLKPGDFVHCCGDTHVYSNHVEPLEKQLA 456 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P + INP D+ SF ++DF + Y+PH I K++V Sbjct: 457 CEPRPFPILKINPEKKDIDSFTFDDFEIVGYDPHPKIEMKMAV 499 >gi|315658331|ref|ZP_07911203.1| thymidylate synthase [Staphylococcus lugdunensis M23590] gi|315496660|gb|EFU84983.1| thymidylate synthase [Staphylococcus lugdunensis M23590] Length = 318 Score = 287 bits (735), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL ++ G ++ DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHDLCEDILAIGKNKDDRTQTGTVSKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL +H +IW+EWA Sbjct: 69 KGDTNIRYLLQHNNNIWNEWAFEKYIKSSDYHGPDMTNFGHRSLVDDHFKAQYKEEMARF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D GN DQ+ ++++ ++ P SRRHI+SAW Sbjct: 129 KENILIDDAFAKKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIEQIKTHPNSRRHIISAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N A +D MALPPCH +FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPAEVDTMALPPCHTMFQFYVQNGKLSCQLYQRSADIFLGVPFNIASYALLTHLVAKECD 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSRS P + IN + + YED L +Y+ Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAVHTQLSRSSFEPPTIRINTD-KSIFDISYEDIELINYQ 307 Query: 254 PHAAILAKVSV 264 HAAI A ++V Sbjct: 308 SHAAIKAPIAV 318 >gi|330899097|gb|EGH30516.1| thymidylate synthase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 277 Score = 287 bits (735), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 136/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V++ G+ + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+ Sbjct: 1 MKSYLDLLGDVLENGAQKGDRTGTGTISVFGRQFRHDLSKGFPLLTTKKLHFKSIVNELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV +L+ +GV IW+EWA ++G+LGP+YG QW +WP DG I+QI +V +L+ Sbjct: 61 WFLGGDTNVRWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + KMALPPCH L+QFYV + KLS L+ RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENARQGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+P+N AS + LT MLA GE + +L DVH+Y+NH EQ Q++R PR L Sbjct: 181 SDTFLGLPYNTASLACLTHMLAQQCDLDVGEIVISLSDVHIYSNHMEQVKTQIAREPRQL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ + + +++EDF + Y+PH I A VS+ Sbjct: 241 PELKLLRKPASIYDYKFEDFEVVGYDPHPHIAAPVSI 277 >gi|301066434|ref|YP_003788457.1| thymidylate synthase [Lactobacillus casei str. Zhang] gi|300438841|gb|ADK18607.1| Thymidylate synthase [Lactobacillus casei str. Zhang] Length = 316 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 189/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSEGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 66 RGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q G+FIHT GD HLY NH +Q QL+R+PR P +++NP+ D+ F +D L +Y+ Sbjct: 246 LQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|313246913|emb|CBY35764.1| unnamed protein product [Oikopleura dioica] Length = 294 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 139/284 (48%), Positives = 185/284 (65%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYLD+ R++I G + DRTG GTRS FG QMRF L+ FPLLTTKK + + ELL Sbjct: 11 QQYLDICRNIIDNGHQKGDRTGTGTRSIFGGQMRFSLADNAFPLLTTKKTFLRGITEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WF+RG +N L V IWD + D G +LGP+YG QWR + Sbjct: 71 WFIRGSTNAKELSDKKVRIWDANGSRAFLDSRGLHNREEWDLGPVYGFQWRHFGAKYGTM 130 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+ +++++R +P RR ++ AWN +D+MALPPCHCL QFYV NGKLS Sbjct: 131 HDDYTGKGVDQLQKVIETIRNNPNDRRMLMVAWNPVDLDEMALPPCHCLCQFYVANGKLS 190 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+L+T+M+A V + G+F+HTLGD H+YNNH +Q + Q+ Sbjct: 191 CQLYQRSCDMGLGVPFNIASYALMTIMIAHVTNLEPGDFVHTLGDAHVYNNHIDQLEEQI 250 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +R PR P+M I + D+ SF+ EDF L YEP+ AI ++V Sbjct: 251 ARVPRKFPKMKITRKVEDIESFKMEDFELSEYEPYPAIKMPMAV 294 >gi|289550834|ref|YP_003471738.1| Thymidylate synthase [Staphylococcus lugdunensis HKU09-01] gi|289180366|gb|ADC87611.1| Thymidylate synthase [Staphylococcus lugdunensis HKU09-01] Length = 318 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL ++ G ++ DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHDLCEDILAIGKNKDDRTQTGTVSKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL +H +IW+EWA Sbjct: 69 KGDTNIRYLLQHNNNIWNEWAFEKYIKSSDYHGPDMTNFGHRSLVDDHFKAQYKEEMTRF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D GN DQ+ ++++ ++ P SRRHIVSAW Sbjct: 129 KENILTDDAFARKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIEQIKTHPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N A +D MALPPCH +FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPAEVDTMALPPCHTMFQFYVQNGKLSCQLYQRSADIFLGVPFNIASYALLTHLVAKECD 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSRS P + IN + + YED L +Y+ Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAVHTQLSRSSFEPPTIRINTD-KSIFDISYEDIELINYQ 307 Query: 254 PHAAILAKVSV 264 HAAI A ++V Sbjct: 308 SHAAIKAPIAV 318 >gi|73662621|ref|YP_301402.1| thymidylate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123734223|sp|Q49XN8|TYSY_STAS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|72495136|dbj|BAE18457.1| thymidylate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 318 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 140/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G + DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K + ELLWF+ Sbjct: 9 YHQLCEEILEIGKQKNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIKYLLQYNNNIWNEWAFEKFVQSKDYNGPDMTDFGHRAQKDESFNLIYKDEMNQF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D GN DQ+ +++ ++ +P SRRHIVSAW Sbjct: 129 KKRILNDDDFAKKYGDLGNVYGKQWRDWEDKYGNHYDQLKTVINQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASYSLLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH E + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIEAIETQLARESYNPPTLNINSD-ASIFDIDYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|256851235|ref|ZP_05556624.1| thymidylate synthase [Lactobacillus jensenii 27-2-CHN] gi|260660659|ref|ZP_05861574.1| thymidylate synthase [Lactobacillus jensenii 115-3-CHN] gi|282934702|ref|ZP_06339945.1| thymidylate synthase [Lactobacillus jensenii 208-1] gi|297206102|ref|ZP_06923497.1| thymidylate synthase [Lactobacillus jensenii JV-V16] gi|256616297|gb|EEU21485.1| thymidylate synthase [Lactobacillus jensenii 27-2-CHN] gi|260548381|gb|EEX24356.1| thymidylate synthase [Lactobacillus jensenii 115-3-CHN] gi|281301277|gb|EFA93578.1| thymidylate synthase [Lactobacillus jensenii 208-1] gi|297149228|gb|EFH29526.1| thymidylate synthase [Lactobacillus jensenii JV-V16] Length = 318 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 181/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+++++ G D+ DRTG GTRS FG QMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 8 YLDLLKNIMETGHDKTDRTGTGTRSRFGAQMRFDLSEGFPLLTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K Sbjct: 68 RGDTNIKFLLEHNNHIWDEWAFKKWVNSDDYHGPDMTDFGLRSQADSEFKKQYDEQMQIF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W G IDQI ++ L P SRR IVSAW Sbjct: 128 TKRILEDADFAKKFGNLGDVYGAQWRHWKKRSGGSIDQIQEVLNQLTIHPDSRRMIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV + KLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDVPTSALPPCHTLFQFYVADNKLSLQLYQRSGDMFLGVPFNIASYSLLLSLVARQTG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF+Q + QLSR P P++ +NP D+ F ED + Y+ Sbjct: 248 LEVGEFVHTLGDAHIYKNHFDQVEKQLSRDPFDSPKLWLNPAKKDISDFEMEDIKVVDYK 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGVIKAPVAV 318 >gi|223043144|ref|ZP_03613191.1| thymidylate synthase [Staphylococcus capitis SK14] gi|222443355|gb|EEE49453.1| thymidylate synthase [Staphylococcus capitis SK14] Length = 318 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 140/311 (45%), Positives = 185/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYVNSEDYQGPDMTNFGHRSQEDPEFNEQYKEEMKKF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KERILNDDEFARQYGDLGNVYGKQWRDWEDKDGNHFDQLKTVIEQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I+ MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPTEIETMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECE 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QLSR P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHMSAIETQLSRESYKAPTLQINSD-KSIFDINYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|321468779|gb|EFX79762.1| hypothetical protein DAPPUDRAFT_304293 [Daphnia pulex] Length = 292 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 139/284 (48%), Positives = 188/284 (66%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL+L++++++ G+ + DRTG GTRS FG QMRF L G FPLLTTK+V W+ ++ ELL Sbjct: 9 HQYLNLIKNLLQNGNVKGDRTGTGTRSIFGAQMRFSLRSGRFPLLTTKRVFWRGLMEELL 68 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WF+RG +N + L + IWD E+ D ++G+LGPIYG QWR + Sbjct: 69 WFVRGSTNANELREKDIHIWDGNSSREFLDSLGLKDREEGDLGPIYGFQWRHFGANYDNM 128 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY +DQ+ +++ ++R +P RR I++AWN + + MALPPCHCL QFYV NG+LS Sbjct: 129 HSDYSCQGVDQLKNLINTIRTNPDDRRMILTAWNPSALPLMALPPCHCLAQFYVANGELS 188 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFNIASYSLLT M+A V G GEFIHTLGD H+YNNH + QL Sbjct: 189 CQMYQRSADMGLGVPFNIASYSLLTCMIAHVTGLNPGEFIHTLGDAHVYNNHISALEKQL 248 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I + D+ F+ +DF L Y+PH I ++V Sbjct: 249 ERQPRPFPTLKIIRKVSDIDDFKADDFVLEGYDPHPKIPMDMAV 292 >gi|15829009|ref|NP_326369.1| thymidylate synthase [Mycoplasma pulmonis UAB CTIP] gi|25091481|sp|Q98Q31|TYSY_MYCPU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|14089953|emb|CAC13711.1| THYMIDYLATE SYNTHASE (TS) (TSASE) [Mycoplasma pulmonis] Length = 286 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 142/294 (48%), Positives = 190/294 (64%), Gaps = 38/294 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L+ V++ G + +RT V T S FGYQMRFDLSKGFPL+TTKK ++ ++ HELL Sbjct: 1 MKQYLDFLKWVLEKGKHKENRTSVDTISAFGYQMRFDLSKGFPLVTTKKTNFSAIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL + V+IW++W A K G LG Sbjct: 61 WFIKGDTNIKYLVDNKVNIWNQWPYESYKKSQDFQSESLKEFIQKIKDDNEFAQKHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D+ G IDQ+ +++ ++ +P SRR IVS+WN + ID M LPPCH LFQ Sbjct: 121 PVYGKQWR---DFLG--IDQLKKVIEQIKNNPNSRRLIVSSWNPSEIDTMLLPPCHTLFQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV++ KLSC LYQRS D FLGIPFNIASY+LLT +LA + G+F+H++GD H+Y N Sbjct: 176 FYVNDNKLSCHLYQRSADAFLGIPFNIASYALLTFLLAQETNLEVGDFVHSIGDAHIYVN 235 Query: 212 HFEQADLQLSRSPRTLPQMII-NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ QL R+P+ LP++II N NI ++ +ED L YE I +V+V Sbjct: 236 HLEQVKTQLKRNPKELPKLIIKNKNIFEI---NFEDIELVDYEFDPIIKGEVAV 286 >gi|224046130|ref|XP_002194568.1| PREDICTED: thymidylate synthetase [Taeniopygia guttata] Length = 393 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 141/283 (49%), Positives = 182/283 (64%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL +RH+++ G R DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLW Sbjct: 111 QQYLQQVRHILQHGHRREDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLW 170 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F++G +N L GV IWD E+ DK +G+LGP+YG QWR + Sbjct: 171 FIKGSTNAKELSAKGVKIWDANGSREFLDKQGFSTREEGDLGPVYGFQWRHFGAEYKDMH 230 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY +DQ+ ++++++ +P RR I+ AWN I MALPPCH L QFYV NG+LSC Sbjct: 231 TDYSNQGVDQLQKVIETIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSC 290 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E +QL Sbjct: 291 QLYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQ 350 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I I D+ +F+ EDF + Y PH I +++V Sbjct: 351 REPRPFPKLKILREIKDISNFKAEDFQIEDYNPHPPIKMEMAV 393 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 13/91 (14%) Query: 39 SKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADK------- 86 S FPLLTTK+V WK V+ ELLWF++G +N L GV IWD E+ DK Sbjct: 33 SNQFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSAKGVKIWDANGSREFLDKHRFSTRE 92 Query: 87 DGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 DG+LGP+ R P + + Q+ I+Q Sbjct: 93 DGDLGPVXXXXXRPEPG-EQQYLQQVRHILQ 122 >gi|241896672|ref|ZP_04783968.1| thymidylate synthase [Weissella paramesenteroides ATCC 33313] gi|241870153|gb|EER73904.1| thymidylate synthase [Weissella paramesenteroides ATCC 33313] Length = 318 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + ++ G+ + DRTG GTRS FG Q+RFD+S+GFPLLTTK+V + + ELLWFL Sbjct: 8 YLDLAQDILDNGAVKGDRTGTGTRSVFGRQLRFDMSEGFPLLTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIKFLLEHKNHIWDEWAFKNWIESAEYDGPDMTDFGRRSLVDDAFKAQYDEQHAIF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 GELG +YG QWR W G IDQI ++ ++ +P SRR IV+AW Sbjct: 128 VDRILNDDEFAQKYGELGDVYGAQWRHWRRVQGGFIDQIKDVIDQIKTNPNSRRLIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV +GKLS QLYQRS DVFLG+PFNIASYSLL M+A+ G Sbjct: 188 NPEDVPTQALPPCHTLFQFYVADGKLSLQLYQRSADVFLGVPFNIASYSLLLHMVAAQTG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + G+F+HT GD H+Y+NH EQ QL R R LP + +NP++ D+ + D + +Y Sbjct: 248 LEPGKFVHTFGDTHIYSNHIEQVTEQLQREMRELPTITLNPDVKDIAEYTMADIKINNYN 307 Query: 254 PHAAILAKVSV 264 PHA+I A V+V Sbjct: 308 PHASIKAPVAV 318 >gi|224476558|ref|YP_002634164.1| thymidylate synthase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421165|emb|CAL27979.1| thymidylate synthase [Staphylococcus carnosus subsp. carnosus TM300] Length = 317 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 138/311 (44%), Positives = 191/311 (61%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL + +++ G++R DRT GT S FG+Q+RFDLS+GFPLLTTKKV +K + EL+WF+ Sbjct: 8 YHDLCKEILEIGNERDDRTHTGTISKFGHQLRFDLSEGFPLLTTKKVSFKLLATELVWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 68 KGDTNIKYLLQYNNNIWNEWAFEKYIQSEDYTGPDMTNFGHRALQDLEFNERYQEEMDKF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G+LG +YG QWR W DG DQ++++++ ++ P SRRHIVSAW Sbjct: 128 KKKILNDDAFAEKHGDLGNVYGKQWRDWVGADGKHYDQLATVIKQIKKHPTSRRHIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASYSLLT ++A G Sbjct: 188 NPSEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYSLLTHLVAKECG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + + QLSR PQ+ IN + + +YED + +Y+ Sbjct: 248 LEVGEFVHTFGDAHIYSNHIDAIEKQLSRDSYAPPQLKINTD-KSIFEIQYEDLEIVNYQ 306 Query: 254 PHAAILAKVSV 264 H I A ++V Sbjct: 307 SHPGIKAPIAV 317 >gi|195576199|ref|XP_002077964.1| GD22790 [Drosophila simulans] gi|194189973|gb|EDX03549.1| GD22790 [Drosophila simulans] Length = 321 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 143/283 (50%), Positives = 183/283 (64%), Gaps = 22/283 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLLRH+I G R DRT VGT S FG QMRFD+ FPLLTTK+V +++V ELLWF+ Sbjct: 39 YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELLWFV 98 Query: 64 RGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------PD 103 G ++ L V IWD E+ DK G +LGP+YG QWR + D Sbjct: 99 AGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTCDDD 158 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLSC 161 Y G IDQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QFYV G+LSC Sbjct: 159 YSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGELSC 218 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E QL Sbjct: 219 QLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLE 278 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++II + D+ FR+EDF + Y PH I +++V Sbjct: 279 RTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPHPKIKMEMAV 321 >gi|58337204|ref|YP_193789.1| thymidylate synthase [Lactobacillus acidophilus NCFM] gi|227903787|ref|ZP_04021592.1| thymidylate synthase [Lactobacillus acidophilus ATCC 4796] gi|62901151|sp|Q5FKL6|TYSY_LACAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|58254521|gb|AAV42758.1| thymidylate synthase [Lactobacillus acidophilus NCFM] gi|227868674|gb|EEJ76095.1| thymidylate synthase [Lactobacillus acidophilus ATCC 4796] Length = 318 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL+ ++ G D+ DRTG GTRS FG QMRFDLSKGFP+LTTKKV + + ELLWFL Sbjct: 8 YLDLINKIMIEGHDKNDRTGTGTRSYFGAQMRFDLSKGFPILTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHKNHIWDEWAFKNWVNSDEYTGPDMTDFGLRSQSDPEFNKIYQAELKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W DG+ IDQI ++++ ++ +P SRR IV+AW Sbjct: 128 DRRILDDENFAKKYGNLGDVYGAQWRHWQKRDGSFIDQIENVIEQIKNNPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL M+A G Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEFIHTLGD H+Y+NHF Q LSR P PQ+ +NP + F +D L Y+ Sbjct: 248 LQVGEFIHTLGDAHIYSNHFSQVKEMLSRKPYESPQLWLNPEKKHIEDFDMQDIKLVDYK 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|325956588|ref|YP_004292000.1| thymidylate synthase [Lactobacillus acidophilus 30SC] gi|325333153|gb|ADZ07061.1| thymidylate synthase [Lactobacillus acidophilus 30SC] Length = 318 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 8 YLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W DG IDQI ++++ ++ P SRR IV+AW Sbjct: 128 DQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL M+A G Sbjct: 188 NPEDVSTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF+Q LSR P PQ+ +NP + F+ +D + Y+ Sbjct: 248 LEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVDYK 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|325068281|ref|ZP_08126954.1| thymidylate synthase [Actinomyces oris K20] Length = 299 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 139/263 (52%), Positives = 178/263 (67%), Gaps = 2/263 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL V+ G+ + DRTG GTRS F Q+R+DL +GFP +TTK V K+V ELLWFL Sbjct: 37 YENLLAEVLTNGTAKSDRTGTGTRSLFARQLRYDLQRGFPRITTKFVAMKAVKGELLWFL 96 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV +L G++IWDEWAD GELGP+YG QWRSWP DG IDQI+ ++ +LR DP Sbjct: 97 RGETNVRWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGAIDQIAGLIDTLRTDP 156 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + MAL PCH FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L Sbjct: 157 DSRRMLVSAWNVSELGSMALAPCHAFFQCYVADGRLSLQIYQRSADLFLGVPFNIASYAL 216 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SF 242 LT MLA + GE I T GD H+Y+NH EQ QLSR P P + + + ++ Sbjct: 217 LTHMLAQQTDLEPGELIWTGGDCHIYDNHIEQVRTQLSRVPSAHPFPTLRLERAESIDAY 276 Query: 243 RYEDF-TLRSYEPHAAILAKVSV 264 +D + YE H I A V+V Sbjct: 277 DMDDIDASQGYEHHPTIKAPVAV 299 >gi|315038135|ref|YP_004031703.1| thymidylate synthase [Lactobacillus amylovorus GRL 1112] gi|312276268|gb|ADQ58908.1| thymidylate synthase [Lactobacillus amylovorus GRL 1112] Length = 318 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 8 YLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFSLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W DG IDQI ++++ ++ P SRR IV+AW Sbjct: 128 DQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL M+A G Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF+Q LSR P PQ+ +NP + F+ +D + Y+ Sbjct: 248 LEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVDYK 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|222151325|ref|YP_002560481.1| thymidylate synthase [Macrococcus caseolyticus JCSC5402] gi|222120450|dbj|BAH17785.1| thymidylate synthase [Macrococcus caseolyticus JCSC5402] Length = 316 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 144/312 (46%), Positives = 192/312 (61%), Gaps = 52/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +Y +LL+ +++ G D+ DRT GT S FG+QMRFDLSKGFPLLTTKKV +K V EL+WF Sbjct: 7 EYHNLLKLILETGKDKDDRTNTGTLSVFGHQMRFDLSKGFPLLTTKKVSFKLVATELIWF 66 Query: 63 LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84 +RGD+N+ YL + +IW+EWA Sbjct: 67 IRGDTNIRYLLEYNNNIWNEWAFLKWIESDEYMGPDMTDFGHRALRDPEFNEQYREQLNI 126 Query: 85 -------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 D D G+LG +YG QWR + D V DQ+ +++ ++++P+SRRHIVSA Sbjct: 127 FKEKILTDDDFMQRFGDLGNVYGKQWRQFETKD-RVTDQLKEVIEQIKSNPHSRRHIVSA 185 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN I+ MALPPCH +FQFYV++ KLSCQLYQRS DVFLG+PFNIASYSLLT ++A Sbjct: 186 WNPGEIESMALPPCHTMFQFYVNDNKLSCQLYQRSADVFLGVPFNIASYSLLTHLVAREC 245 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEFIH++GD H+Y+NH E + QL RS P++ IN N D+ + YED + Y Sbjct: 246 GLEVGEFIHSMGDAHIYSNHIEAVETQLMRSSYEAPKLQIN-NDKDIFNIEYEDLEIIDY 304 Query: 253 EPHAAILAKVSV 264 H AI A ++V Sbjct: 305 TAHPAIKAPIAV 316 >gi|331006117|ref|ZP_08329451.1| Thymidylate synthase [gamma proteobacterium IMCC1989] gi|330420096|gb|EGG94428.1| Thymidylate synthase [gamma proteobacterium IMCC1989] Length = 277 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 137/277 (49%), Positives = 179/277 (64%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL ++ G + DRTG GT S FG Q R +L GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKAYLDLLDDILSNGVQKGDRTGTGTLSVFGRQYRHNLQDGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N +L +GVSIWDEWAD++G+LGP+YG QW +WP DG I+QI +V L+ Sbjct: 61 WFLKGDTNTQWLKENGVSIWDEWADENGDLGPLYGKQWTAWPTKDGGSINQIDYVVDCLK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + +MALPPCH L+QFYV N +LS QLY RS Sbjct: 121 NNPDSRRILFHGWNVEYLPDESVSPQENVKQGRMALPPCHLLYQFYVANNRLSAQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+P+N AS +LL MLA GE I + GD H+Y+NH EQ + QLSR PR L Sbjct: 181 SDSFLGLPYNTASLALLVHMLAQQCDLDVGEVIVSTGDSHIYSNHLEQVNTQLSREPRAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+ I + + ++DF + Y+ H AI A V+V Sbjct: 241 PQLTIKRKPASIYDYTFDDFEIIGYDAHPAIKAPVAV 277 >gi|195941079|ref|ZP_03086461.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4024] Length = 206 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 128/206 (62%), Positives = 164/206 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDV 206 Y+LL M+A + G+F+ T GD Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDT 206 >gi|314936430|ref|ZP_07843777.1| thymidylate synthase [Staphylococcus hominis subsp. hominis C80] gi|313655049|gb|EFS18794.1| thymidylate synthase [Staphylococcus hominis subsp. hominis C80] Length = 318 Score = 285 bits (730), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K + ELLWF+ Sbjct: 9 YHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKVSFKLIATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIKYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQKDENFNKMYQQEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D GN DQ+ +++Q ++ +P SRRHIVSAW Sbjct: 129 KEKVLNDDTFAKKYGDLGHVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH E QLSR P + IN + YED L Y+ Sbjct: 249 LEVGEFIHTFGDAHIYSNHIEAIKTQLSRESFAPPTLKINSE-QSIFDINYEDLELVDYQ 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|327183411|gb|AEA31858.1| thymidylate synthase [Lactobacillus amylovorus GRL 1118] Length = 318 Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 8 YLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W DG IDQI ++++ ++ P SRR IV+AW Sbjct: 128 DQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL M+A G Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF+Q LSR P PQ+ +NP + F+ +D + Y+ Sbjct: 248 LEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVDYK 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|269219953|ref|ZP_06163807.1| thymidylate synthase [Actinomyces sp. oral taxon 848 str. F0332] gi|269210693|gb|EEZ77033.1| thymidylate synthase [Actinomyces sp. oral taxon 848 str. F0332] Length = 267 Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 139/262 (53%), Positives = 179/262 (68%), Gaps = 2/262 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL V++ G+++ DRTG GT S FG Q+R+ L++GFP +TTK V K+V ELLWFL Sbjct: 7 YEDLLADVLENGAEKGDRTGTGTLSVFGRQIRYRLAEGFPRITTKFVAMKAVKGELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 GD+NV +L G++IWDEWAD GELGP+YG QWRSWP DG IDQI ++ LRA P Sbjct: 67 SGDTNVRWLQERGITIWDEWADDAGELGPVYGYQWRSWPTPDGRHIDQIEQVLGELRAHP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWN A +DKMAL PCH +FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRLVVSAWNPADLDKMALQPCHAMFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G G+F+ T GD H+Y NH +Q QL+R P P + + + + Sbjct: 187 LTHMMAQQAGLDVGDFVWTGGDCHIYLNHVKQVKEQLTREPYPFPTLRLR-KAPSIFEYA 245 Query: 244 YEDFTL-RSYEPHAAILAKVSV 264 +D + Y H + A V+V Sbjct: 246 MDDIDASQGYRHHPKLHAPVAV 267 >gi|303275197|ref|XP_003056897.1| bifunctional dihydrofolate reductase-thymidylate synthase [Micromonas pusilla CCMP1545] gi|226461249|gb|EEH58542.1| bifunctional dihydrofolate reductase-thymidylate synthase [Micromonas pusilla CCMP1545] Length = 524 Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 135/282 (47%), Positives = 182/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL+R +I+ G+ + DRTG GT S FG MRFDL + FPLLTTK+V W+ V ELLWF Sbjct: 243 QYLDLIRDIIESGNVKGDRTGTGTISKFGTSMRFDLRRSFPLLTTKRVFWRGVAEELLWF 302 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 + G +N L + IWD E+ D G +LGP+YG QWR + Sbjct: 303 VGGRTNAKELQDKDIHIWDGNGSREYLDSVGLSHREEQDLGPVYGFQWRHFGAEYTDMHA 362 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +YDG +DQ++ ++ ++ +P RR +++AWN A + +MALPPCH QFYV NG+LSCQ Sbjct: 363 NYDGKGVDQLAEVIDKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSCQ 422 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H +GD H+Y+NH E QL Sbjct: 423 MYQRSCDMGLGVPFNIASYSLLTCMIAQVCGLKPGDFVHVMGDTHVYSNHVEPLKKQLLC 482 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P + INP D+ SF + DFT+ Y+PH I K++V Sbjct: 483 EPRPFPTLKINPAKTDIDSFEFSDFTIEGYDPHPKIEMKMAV 524 >gi|312373107|gb|EFR20923.1| hypothetical protein AND_18288 [Anopheles darlingi] Length = 295 Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 141/282 (50%), Positives = 181/282 (64%), Gaps = 21/282 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL L+R ++ G+ R DRTGVGT S FG Q+R+ L G FPLLTTKKV ++ + ELLWF Sbjct: 14 YLQLIRDIVSKGNKRSDRTGVGTLSIFGTQLRYSLRDGTFPLLTTKKVFFRGIAEELLWF 73 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------P 102 +RG +N L GV IWD E+ D ++G+LGP+YG QWR + Sbjct: 74 IRGSTNAKELQAKGVRIWDGNSTREFLDSCGFTDREEGDLGPVYGFQWRHFGATYGTCHD 133 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G DQ++ I+ L+ +P RR I+SAWN I MALPPCHCL QFYV NG+LSCQ Sbjct: 134 DYTGKGKDQLAEIIDKLKNNPTDRRIILSAWNPVDIPIMALPPCHCLVQFYVANGELSCQ 193 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS DV LG+PFNIASYSLLT M+A V G + GEFIHT+GD H+Y NH + QL R Sbjct: 194 MYQRSADVGLGVPFNIASYSLLTHMIAHVTGLKAGEFIHTMGDTHIYLNHVDALKEQLQR 253 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + I + + F+YEDF + Y PH AI +++V Sbjct: 254 EPKPFPTLTIKRQVASIDDFQYEDFAINDYNPHPAIKMEMAV 295 >gi|313224867|emb|CBY20659.1| unnamed protein product [Oikopleura dioica] Length = 294 Score = 285 bits (728), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 137/284 (48%), Positives = 185/284 (65%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYLD+ R++I G + DRTG GTRS FG QMRF L+ FPLLTTKK + + ELL Sbjct: 11 QQYLDICRNIIDNGHQKGDRTGTGTRSIFGGQMRFSLADNAFPLLTTKKTFLRGITEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WF+RG +N L V IWD + D G +LGP+YG QWR + Sbjct: 71 WFIRGSTNAKELSDKKVRIWDANGSRAFLDSRGLHNREEWDLGPVYGFQWRHFGAKYGTM 130 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+ ++++++ +P RR ++ AWN +D+MALPPCHCL QFYV NGKLS Sbjct: 131 HDDYTGKGVDQLQKVIETIKNNPNDRRMLMVAWNPVDLDEMALPPCHCLCQFYVANGKLS 190 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+L+T+M+A V + G+F+HTLGD H+YNNH +Q + Q+ Sbjct: 191 CQLYQRSCDMGLGVPFNIASYALMTIMIAHVTNLEPGDFVHTLGDAHVYNNHIDQLEEQI 250 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +R PR P+M I + D+ +F+ EDF L YEP+ AI ++V Sbjct: 251 ARVPRKFPKMKITRKVEDIENFKMEDFELSEYEPYPAIKMPMAV 294 >gi|199598695|ref|ZP_03212109.1| thymidylate synthase [Lactobacillus rhamnosus HN001] gi|258508392|ref|YP_003171143.1| thymidylate synthase [Lactobacillus rhamnosus GG] gi|199590383|gb|EDY98475.1| thymidylate synthase [Lactobacillus rhamnosus HN001] gi|257148319|emb|CAR87292.1| Thymidylate synthase [Lactobacillus rhamnosus GG] gi|259649706|dbj|BAI41868.1| thymidylate synthase [Lactobacillus rhamnosus GG] Length = 316 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHKNHIWDEWAFEKWVKSDEYRGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|17137556|ref|NP_477367.1| Ts [Drosophila melanogaster] gi|13959716|sp|O76511|TYSY_DROME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|7295876|gb|AAF51176.1| Ts [Drosophila melanogaster] gi|19528437|gb|AAL90333.1| RE18955p [Drosophila melanogaster] gi|220948118|gb|ACL86602.1| CG3181-PA [synthetic construct] gi|220957368|gb|ACL91227.1| Ts-PA [synthetic construct] Length = 321 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 145/286 (50%), Positives = 184/286 (64%), Gaps = 23/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MH YLDLLRH+I G R DRT VGT S FG QMRFD+ FPLLTTK+V +++V ELL Sbjct: 37 MH-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WF+ G ++ L V IWD E+ DK G +LGP+YG QWR + Sbjct: 96 WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158 DY G IDQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QFYV G+ Sbjct: 156 DDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGE 215 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P++II + D+ FR+EDF + Y PH I ++V Sbjct: 276 QLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321 >gi|70726480|ref|YP_253394.1| thymidylate synthase [Staphylococcus haemolyticus JCSC1435] gi|123776140|sp|Q4L6D7|TYSY_STAHJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|68447204|dbj|BAE04788.1| thymidylate synthase [Staphylococcus haemolyticus JCSC1435] Length = 318 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 140/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K + ELLWF+ Sbjct: 9 YHALCEEILEIGNQRDDRTHTGTFSKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFEKYVQSNDYHGPDMTNFGHRALQDDEFNELYKEEMSKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D +GN DQ+ ++++ ++ P SRRHIVSAW Sbjct: 129 KQHILNDDSFAKKYGDLGNVYGKQWRDWVDKEGNHFDQLKTVIEQIKNSPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH E QLSR+ P + IN N + YED L Y Sbjct: 249 LEVGEFVHTFGDAHIYSNHIEAIKTQLSRNSFDPPTLKINSN-ASIFDINYEDLELIGYN 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|26554141|ref|NP_758075.1| thymidylate synthase [Mycoplasma penetrans HF-2] gi|38258786|sp|Q8EV81|TYSY_MYCPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|26454149|dbj|BAC44479.1| thymidylate synthase [Mycoplasma penetrans HF-2] Length = 289 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 136/294 (46%), Positives = 189/294 (64%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +Y DLL+ V+ G + +RT + FG Q R+DL+KGFPLLTTKK+ +K++ HELL Sbjct: 1 MKEYKDLLKLVLDNGIMQENRTDTDAIAYFGTQSRYDLTKGFPLLTTKKMAYKAIFHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WFL+G++N+ YL + V IW+EW A + GELG Sbjct: 61 WFLKGETNIKYLVDNNVKIWNEWPYENYKKSPYFKNESIDEFILKIKEDDSFAKQFGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ N +DQI+++++ ++ + YSRR IVS WN + I M LPPCHCLFQ Sbjct: 121 PVYGRQWRNF-----NGVDQITNLIEEIKKNKYSRRLIVSVWNPSEIKNMLLPPCHCLFQ 175 Query: 152 FYVDN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 F+V++ +LSCQLYQRS D+FLG+PFNIASYSLLT M+A V EF+HT+G H+YN Sbjct: 176 FFVNSKNELSCQLYQRSADLFLGVPFNIASYSLLTYMIAQVTNTTAKEFVHTIGVAHIYN 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH +Q QL+R P LP +++N NI ++ F+ ED ++ Y H AI KV+V Sbjct: 236 NHIDQVKEQLTREPLQLPTLVLNKNIKNIFDFKIEDIEIKDYNSHPAIKGKVAV 289 >gi|238854701|ref|ZP_04645031.1| thymidylate synthase [Lactobacillus jensenii 269-3] gi|260663934|ref|ZP_05864787.1| thymidylate synthase [Lactobacillus jensenii SJ-7A-US] gi|282932908|ref|ZP_06338305.1| thymidylate synthase [Lactobacillus jensenii 208-1] gi|313472235|ref|ZP_07812727.1| thymidylate synthase [Lactobacillus jensenii 1153] gi|238832491|gb|EEQ24798.1| thymidylate synthase [Lactobacillus jensenii 269-3] gi|239529621|gb|EEQ68622.1| thymidylate synthase [Lactobacillus jensenii 1153] gi|260561820|gb|EEX27789.1| thymidylate synthase [Lactobacillus jensenii SJ-7A-US] gi|281302943|gb|EFA95148.1| thymidylate synthase [Lactobacillus jensenii 208-1] Length = 318 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+++++ G D+ DRTG GTRS FG QMRFDLS+GFPL+TTKKV + + ELLWFL Sbjct: 8 YLDLLKNIMETGHDKTDRTGTGTRSKFGAQMRFDLSQGFPLVTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L H IWDEWA Sbjct: 68 RGDTNIKFLLEHKNHIWDEWAFKNWVNSPEYQGPDMNDFGLRSQKDADFKKLYDEQMKLF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G LG +YG QWR W G IDQI ++ L+ P SRR IVSAW Sbjct: 128 TERILSDEAFAEKYGNLGDVYGAQWRHWKKRSGGSIDQIQDVLNQLQTHPDSRRMIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV + KLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDVPTSALPPCHTLFQFYVADNKLSLQLYQRSGDMFLGVPFNIASYSLLLSLVARQTG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 F+ GEF+HTLGD H+Y NHF+Q + QL+R P P++ +N ++ F ED + Y+ Sbjct: 248 FEVGEFVHTLGDAHIYKNHFDQVEKQLARDPFDSPKLWLNSAKKNISDFEMEDIKVLDYK 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGVIKAPVAV 318 >gi|227498216|ref|ZP_03928387.1| thymidylate synthase [Actinomyces urogenitalis DSM 15434] gi|226832398|gb|EEH64781.1| thymidylate synthase [Actinomyces urogenitalis DSM 15434] Length = 295 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 140/264 (53%), Positives = 183/264 (69%), Gaps = 4/264 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL V+ G+ + DRTG GTRS F Q+R+DLS+GFP +TTK V K+V ELLWFL Sbjct: 33 YEELLAEVLLDGAPKGDRTGTGTRSLFARQLRYDLSQGFPRVTTKFVAMKAVKGELLWFL 92 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G SN+++LH G++IWDEWAD+ GELGP+YGVQWRSWP G IDQI+ ++ +LR DP Sbjct: 93 QGASNIAWLHEQGITIWDEWADEHGELGPVYGVQWRSWPSRRGEAIDQITQLIHTLRHDP 152 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + MAL PCH FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L Sbjct: 153 DSRRMLVSAWNVSELGAMALAPCHAFFQCYVADGRLSLQVYQRSADLFLGVPFNIASYAL 212 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR--TLPQMIINPNIVDLLS 241 LT MLA G + GE + T GD H+Y+NH Q QLSR P+ P + + + + S Sbjct: 213 LTHMLAQQAGLEPGELVWTGGDCHIYDNHLAQVREQLSRVPQAYAFPTLRLR-HAESIDS 271 Query: 242 FRYEDFTLRS-YEPHAAILAKVSV 264 + ED + Y+ H I A V+V Sbjct: 272 YTMEDIDASAGYQHHPVIKAPVAV 295 >gi|149601|gb|AAA25255.1| thymidylate synthase [Lactobacillus casei] Length = 329 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 19 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 78 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 79 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 138 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 139 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 198 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 199 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 258 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 259 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 318 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 319 PYPAIKAPVAV 329 >gi|229552189|ref|ZP_04440914.1| thymidylate synthase [Lactobacillus rhamnosus LMS2-1] gi|229314491|gb|EEN80464.1| thymidylate synthase [Lactobacillus rhamnosus LMS2-1] Length = 325 Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 15 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 74 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 75 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 134 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 135 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 194 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 195 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 254 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 255 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 314 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 315 PYPAIKAPVAV 325 >gi|167957301|ref|ZP_02544375.1| Thymidylate synthase [candidate division TM7 single-cell isolate TM7c] Length = 312 Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 147/312 (47%), Positives = 190/312 (60%), Gaps = 48/312 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD+LR+V G + +RTG GT FG Q R++L GFP +TTKK+++ SV HELL Sbjct: 1 MRQYLDILRYVRNNGIQKSNRTGTGTTEIFGAQTRYNLEDGFPAVTTKKLYFNSVAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------------------------------- 83 WFL+G N+ YL ++GV IWDEW Sbjct: 61 WFLKGTGNIEYLAQNGVHIWDEWPYKNYLEKTGQRIPEINGDEWCAGMKQFIGRIATDHA 120 Query: 84 -ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 A++ G+LGP+YGVQWR WPD G IDQI + + ++ +P SRR+IVSAWNVA ID +A Sbjct: 121 FAEEWGDLGPVYGVQWRKWPDGKGGTIDQIQNAIDMIKNNPMSRRNIVSAWNVAEIDDIA 180 Query: 143 ----LPPCHCLFQFYV---DNG---KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 LPPCH +FQF V +NG KL L QRS D+FLG+PFNIASY+LL M+A V Sbjct: 181 RAGGLPPCHTIFQFNVRPGENGEKDKLDLTLTQRSADIFLGVPFNIASYALLLSMIAQVT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G Q GEF+HTL H+YNNH Q D QLSR P LP++ +NP+I ++ F +D L Y Sbjct: 241 GKQPGEFVHTLNSAHIYNNHRVQVDEQLSRHPLPLPKLWLNPDIKNIDDFTIKDIRLEGY 300 Query: 253 EPHAAILAKVSV 264 E H+ I A ++V Sbjct: 301 ESHSPIKAPIAV 312 >gi|136612|sp|P00469|TYSY_LACCA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157831773|pdb|1LCA|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And Cb3717 gi|157831774|pdb|1LCB|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dtmp And H2folate gi|157831775|pdb|1LCE|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And Ch2thf gi|157832141|pdb|1NJE|A Chain A, Thymidylate Synthase With 2'-Deoxycytidine 5'-Monophosphate (Dcmp) gi|157833951|pdb|1THY|A Chain A, Refined Structures Of Substrate-Bound And Phosphate-Bound Thymidylate Synthase From Lactobacillus Casei gi|157834017|pdb|1TSL|A Chain A, L. Casei Thymidylate Synthase With Species Specific Inhibitor gi|157834018|pdb|1TSM|A Chain A, L. Casei Thymidylate Synthase With Species Specific Inhibitor gi|157836379|pdb|2TDM|A Chain A, Structure Of Thymidylate Synthase gi|157837001|pdb|4TMS|A Chain A, Plastic Adaptation Toward Mutations In Proteins: Structural Comparison Of Thymidylate Synthases gi|218681751|pdb|3BNZ|A Chain A, Crystal Structure Of Thymidylate Synthase Ternary Complex With Dump And 8a Inhibitor gi|221046605|pdb|3BYX|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And The Phtalimidic Derivative C00 In Multiple Binding Modes gi|221046606|pdb|3BZ0|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And The Phtalimidic Derivative C00 gi|221046647|pdb|3C06|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And The Phtalimidic Derivative 14c In Multiple Binding Modes-Mode 1 gi|221046648|pdb|3C0A|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And The Phtalimidic Derivative 14c In Multiple Binding Modes-Mode 2 gi|302566074|pdb|3IJZ|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And Pthalimidic Derivative 15c gi|302566075|pdb|3IK0|A Chain A, Lactobacillus Casei Thymidylate Synthase In Ternary Complex With Dump And The Phtalimidic Derivative 7c1 gi|302566076|pdb|3IK1|A Chain A, Lactobacillus Casei Thymidylate Synthase In Ternary Complex With Dump And The Phtalimidic Derivative 20c gi|208731|gb|AAA72795.1| thymidylate synthase (EC 2.1.1.45) [synthetic construct] Length = 316 Score = 284 bits (727), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|313123489|ref|YP_004033748.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280052|gb|ADQ60771.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684319|gb|EGD26489.1| thymidylate synthase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 318 Score = 284 bits (727), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V + + ELLWFL Sbjct: 8 YLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W DG IDQI+ +++ ++ +P SRR IV+AW Sbjct: 128 CQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT+GD H+Y NHF Q + QL R+P P + +NP + F D L +Y+ Sbjct: 248 LEVGEFVHTIGDAHIYKNHFAQVEEQLKRTPFDAPTLWLNPEKKKVADFEMADIKLVNYQ 307 Query: 254 PHAAILAKVSV 264 + I A V+V Sbjct: 308 HGSTIKAPVAV 318 >gi|330723643|gb|AEC46013.1| thymidylate synthase [Mycoplasma hyorhinis MCLD] Length = 270 Score = 284 bits (727), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 134/272 (49%), Positives = 179/272 (65%), Gaps = 34/272 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+ LRH+++ G + +RT V + +TFGYQMRFDLS+GFPL+TTKK ++ S+ HELL Sbjct: 1 MRQYLEFLRHILQKGIKKTNRTIVDSINTFGYQMRFDLSEGFPLVTTKKTNFASIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL + V+IW+EW A + GELG Sbjct: 61 WFIKGDTNIKYLVDNNVNIWNEWPYENYKKSKEFQGESLKEFIVKIKENPSFAKQFGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ +DQ+ ++Q ++ +P SRR IVSAWN ID M LPPCH LFQ Sbjct: 121 PVYGKQWRNFLG-----VDQLKKVIQEIKTNPNSRRLIVSAWNPLEIDSMLLPPCHSLFQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV N KLSCQLYQRS D FLG+PFNIASYSLL M+A + GEFIHT+GD H+Y N Sbjct: 176 FYVANNKLSCQLYQRSADAFLGVPFNIASYSLLVFMIAQECELEVGEFIHTIGDAHIYVN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 H +Q +LQL+R P LP++ I N+ + + + Sbjct: 236 HIDQVNLQLTRIPHKLPKLKITKNLFLIFNLK 267 >gi|9628075|ref|NP_042669.1| thymidylate synthase [Equid herpesvirus 2] gi|6686067|sp|Q89940|TYSY_EHV2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|695245|gb|AAC13860.1| thymidylate synthase [Equid herpesvirus 2] Length = 289 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 141/283 (49%), Positives = 184/283 (65%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL+ +R ++ G R DRTGVGT S FG Q ++ L FPLLTTK+V W+ V+ ELLW Sbjct: 7 HQYLNTVREILANGVRRGDRTGVGTLSVFGDQAKYSLRGQFPLLTTKRVFWRGVLEELLW 66 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101 F+RG ++ + L GV IWD +D G+LGP+YG QWR S Sbjct: 67 FIRGSTDSNELSARGVKIWDANGSRDFLARAGLGHREPGDLGPVYGFQWRHFGAAYVDSK 126 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ ++ +P SRR +++AWN A + MALPPCH L QFYV G+LSC Sbjct: 127 TDYRGQGVDQLRDLIGEIKRNPESRRLVLTAWNPADLPAMALPPCHLLCQFYVAGGELSC 186 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFNIASYSLLT M+A + G + G+FIH LGD H+Y NH E LQL+ Sbjct: 187 QLYQRSGDMGLGVPFNIASYSLLTYMVAHLTGLEPGDFIHVLGDAHVYLNHVEPLKLQLT 246 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 RSPR P++ I + D+ FR EDF L Y PHAAI +++V Sbjct: 247 RSPRPFPRLRILRRVEDIDDFRAEDFALEGYHPHAAIPMEMAV 289 >gi|326774199|ref|ZP_08233481.1| thymidylate synthase [Actinomyces viscosus C505] gi|326636338|gb|EGE37242.1| thymidylate synthase [Actinomyces viscosus C505] Length = 275 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 139/263 (52%), Positives = 177/263 (67%), Gaps = 2/263 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL V+ G+ + DRTG GTRS F Q+R+DL +GFP +TTK V K+V ELLWFL Sbjct: 13 YENLLAEVLTNGTAKSDRTGTGTRSLFARQLRYDLRRGFPRITTKFVAMKAVKGELLWFL 72 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV +L G++IWDEWAD GELGP+YG QWRSWP DG IDQI+ ++ +LR DP Sbjct: 73 RGETNVRWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGAIDQITGLIDTLRTDP 132 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + MAL PCH FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L Sbjct: 133 DSRRMLVSAWNVSELGSMALAPCHAFFQCYVADGRLSLQIYQRSADLFLGVPFNIASYAL 192 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SF 242 L MLA + GE I T GD H+Y+NH EQ QLSR P P + + + S+ Sbjct: 193 LAHMLAQQTDLEPGELIWTGGDCHIYDNHIEQVRTQLSRVPNAHPFPTLRLERAESIDSY 252 Query: 243 RYEDF-TLRSYEPHAAILAKVSV 264 +D + YE H I A V+V Sbjct: 253 DMDDIDASQGYEHHPTIKAPVAV 275 >gi|118086858|ref|XP_419147.2| PREDICTED: similar to Chain A, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation [Gallus gallus] Length = 298 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 140/282 (49%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL +RH+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 17 QYLQQVRHILQHGHRKEDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 76 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------P 102 ++G +N L GV IWD E+ DK +G+LGP+YG QWR + Sbjct: 77 IKGSTNAKELSAKGVKIWDANGSREFLDKQGFCTREEGDLGPVYGFQWRHFGADYKDMHT 136 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY +DQ+ +++ ++ +P RR I+ AWN I MALPPCH L QFYV NG+LSCQ Sbjct: 137 DYSNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQ 196 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E +QL R Sbjct: 197 LYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQR 256 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR LP++ I + D+ F+ EDF + Y PH I +++V Sbjct: 257 EPRPLPKLRILRKVEDISDFKAEDFQIEDYNPHPPIKMEMAV 298 >gi|323466728|gb|ADX70415.1| Thymidylate synthase [Lactobacillus helveticus H10] Length = 318 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTG GTRS FG QMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 8 YLDLLQKIMSEGHDKDDRTGTGTRSYFGAQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVNSSEYQGPDMTDFGLRSQSDPEFNKIYQAEMKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W +G IDQI+ +++ ++ P SRR IV+AW Sbjct: 128 DQRILDDEDFAKKYGNLGDVYGAQWRHWEKREGGFIDQIADVIKQIKETPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNLIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEFIHTLGD H+Y NH +Q + LSR P PQ+ +NP ++ F +D + Y+ Sbjct: 248 LQVGEFIHTLGDAHIYRNHLKQVEELLSRKPYDSPQLWLNPEKKNIADFEMKDIKVVDYQ 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|300812535|ref|ZP_07092956.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496492|gb|EFK31593.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 318 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V + + ELLWFL Sbjct: 8 YLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W DG IDQI+ +++ ++ +P SRR IV+AW Sbjct: 128 CQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT+GD H+Y NHF Q + QL R P P + +NP + F D L +Y+ Sbjct: 248 LEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPEKKKVADFEMADIKLVNYQ 307 Query: 254 PHAAILAKVSV 264 + I A V+V Sbjct: 308 HGSTIKAPVAV 318 >gi|3342458|gb|AAC27622.1| thymidylate synthase [Drosophila melanogaster] Length = 321 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 144/286 (50%), Positives = 184/286 (64%), Gaps = 23/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MH YLDLLRH+I G R DRT VGT S FG QMRFD+ FPLLTTK+V +++V ELL Sbjct: 37 MH-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WF+ G ++ L V IWD E+ DK G +LGP+YG QWR + Sbjct: 96 WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158 DY G IDQ+ ++ ++R +P RR I+SAWN + KMALPPCHCL QFYV G+ Sbjct: 156 DDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDMPKMALPPCHCLAQFYVSEKRGE 215 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P++II + D+ FR+EDF + Y PH I ++V Sbjct: 276 QLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321 >gi|304390727|ref|ZP_07372679.1| thymidylate synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325610|gb|EFL92856.1| thymidylate synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 272 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 135/263 (51%), Positives = 183/263 (69%), Gaps = 2/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DLL ++ G ++ DRTG GTRS FG Q+R+DLS+GFP +TTK ++W VV ELLW Sbjct: 12 HQYEDLLADIMSHGVEKSDRTGTGTRSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G +N +L + + IWDEWAD+ G+LGPIYG QWR+WP G V DQ+ ++++L+ Sbjct: 72 FLQGGTNNRWLQENNIHIWDEWADESGDLGPIYGHQWRAWPTAAGPV-DQVKKLLETLQN 130 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV+ +D+MAL PCH FQ +V G+LS Q+YQRS D+FLG+PFNIASY Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA Q GE + T GD H+Y+NH +Q LQLSR P P + ++ + Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFPILELD-KAESIDG 249 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + ++ L +Y+ H I A V+V Sbjct: 250 YTFDMIRLANYQHHPKISAPVAV 272 >gi|240129500|gb|ACS44779.1| thymidylate synthase [Litopenaeus vannamei] Length = 289 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 135/284 (47%), Positives = 184/284 (64%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLDL+R +++ G+ + DRTG GT S FG QMR+ L G FPLLTTK+V W+ V ELL Sbjct: 6 YQYLDLIRQIMRTGNRKGDRTGTGTISMFGAQMRYSLRDGIFPLLTTKRVFWRGVAEELL 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW------- 101 WF+RG +N L + IWD + K+ G+LGP+YG QWR + Sbjct: 66 WFVRGSTNAKELQEKDIHIWDGNSSKEFLNKMGFHDREEGDLGPVYGFQWRHFGAPYADM 125 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+ ++ +++ +P RR I+ AWN + KMALPPCHCL QFYV NG+LS Sbjct: 126 HTDYTGQGVDQLQQVIDTIKNNPDDRRIIMCAWNPVDVPKMALPPCHCLCQFYVANGELS 185 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V + G+F+HTLGD H+Y+NH E + QL Sbjct: 186 CQLYQRSADMGLGVPFNIASYALLTYMIAHVTDLKPGDFVHTLGDAHVYSNHCEALEEQL 245 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I + ++ F++EDF L Y+PH I +++V Sbjct: 246 KREPRPFPSLKIKRKVENISDFKFEDFELDGYKPHPKIKMEMAV 289 >gi|242373739|ref|ZP_04819313.1| thymidylate synthase [Staphylococcus epidermidis M23864:W1] gi|242348559|gb|EES40161.1| thymidylate synthase [Staphylococcus epidermidis M23864:W1] Length = 318 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 184/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K + ELLWF+ Sbjct: 9 YHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIQSNDYQGPDMTDFGHRSQQDPEFNELYKEEMKKF 128 Query: 85 ------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 D D G+LG +YG QWR W D DG DQ+ +++ ++ +P SRRHIVSAW Sbjct: 129 KQRILNDDDFARQYGDLGNVYGKQWRDWEDKDGRHFDQLKTVIDQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECH 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAIETQLARESYQAPTLKINTD-KSIFDINYEDLEVVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|300361883|ref|ZP_07058060.1| thymidylate synthase [Lactobacillus gasseri JV-V03] gi|300354502|gb|EFJ70373.1| thymidylate synthase [Lactobacillus gasseri JV-V03] Length = 327 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRF+LS GFP+LTTK+V + + ELLWFL Sbjct: 17 YLDLLNKIMTEGHDKEDRTGTGTRSLFGAQMRFNLSDGFPILTTKRVPFGLIKSELLWFL 76 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 77 RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDTKFKKVYQEEMKRF 136 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W +G IDQI +++ ++ PYSRR IVSAW Sbjct: 137 GERILADQDFAAKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 196 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 197 NPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQETG 256 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y NHF+Q L+R P P++ +NP+ + F D L +Y+ Sbjct: 257 LKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVNYK 316 Query: 254 PHAAILAKVSV 264 H+ I A V+V Sbjct: 317 HHSTIKAPVAV 327 >gi|104773868|ref|YP_618848.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513875|ref|YP_812781.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275355|sp|Q04B29|TYSY_LACDB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123077296|sp|Q1GAP2|TYSY_LACDA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|103422949|emb|CAI97614.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093190|gb|ABJ58343.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125534|gb|ADY84864.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 318 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V + + ELLWFL Sbjct: 8 YLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W DG IDQI+ +++ ++ +P SRR IV+AW Sbjct: 128 CQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT+GD H+Y NHF Q + QL R P P + +NP + F D L +Y+ Sbjct: 248 LEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPGKKKVADFEMADIKLVNYQ 307 Query: 254 PHAAILAKVSV 264 + I A V+V Sbjct: 308 HGSTIKAPVAV 318 >gi|195342137|ref|XP_002037658.1| GM18183 [Drosophila sechellia] gi|194132508|gb|EDW54076.1| GM18183 [Drosophila sechellia] Length = 321 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 142/283 (50%), Positives = 182/283 (64%), Gaps = 22/283 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLLRH+I G R DRT VGT S FG QMRFD+ FPLLTTK+V +++V ELLWF+ Sbjct: 39 YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELLWFV 98 Query: 64 RGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------PD 103 G ++ L V IWD E+ DK G +LGP+YG QWR + + Sbjct: 99 AGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRVVGDLGPVYGFQWRHFGAQYGTCDDN 158 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLSC 161 Y G IDQ+ ++ ++R P RR I+SAWN I KMALPPCHCL QFYV G+LSC Sbjct: 159 YSGKGIDQLRQVIDTIRNKPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGELSC 218 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E QL Sbjct: 219 QLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLQ 278 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++II + D+ FR+EDF + Y PH I +++V Sbjct: 279 RTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPHPKIKMEMAV 321 >gi|162464289|ref|NP_001104916.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea mays] gi|6685381|sp|O81395|DRTS_MAIZE RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|3309066|gb|AAC26003.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea mays] Length = 521 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 135/283 (47%), Positives = 180/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L+ +I+ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW Sbjct: 239 YQYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRKNFPLLTTKRVFWRGVVEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+ G +N L G+ IWD A ++ G+LGPIYG QWR + Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASREYLNSVGLAHREEGDLGPIYGFQWRHFGAEYTDMH 358 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ DP RR I+SAWN + + KMALPPCH QFYV+NG+LSC Sbjct: 359 ADYTGKGFDQLMDVIDKIKNDPEDRRIILSAWNPSDLKKMALPPCHMFAQFYVENGELSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G+F+H +GD H+Y NH + Q+ Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRNHVRALEEQIQ 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP+ D+ SF DF L Y+PH I K++V Sbjct: 479 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKIEMKMAV 521 >gi|157834024|pdb|1TSY|A Chain A, Thymidylate Synthase R179k Mutant gi|157834025|pdb|1TSZ|A Chain A, Thymidylate Synthase R179k Mutant Length = 316 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSR+ IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRKLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|228476137|ref|ZP_04060845.1| thymidylate synthase [Staphylococcus hominis SK119] gi|228269960|gb|EEK11440.1| thymidylate synthase [Staphylococcus hominis SK119] Length = 318 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K + ELLWF+ Sbjct: 9 YHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKVSFKLIATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIKYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQKDENFNKMYQQEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D GN DQ+ +++Q ++ +P SRRHIVSAW Sbjct: 129 KEKVLNDDTFAKKYGDLGHVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH E QLSR P + I+ + YED L Y+ Sbjct: 249 LEVGEFIHTFGDAHIYSNHIEAIKTQLSRESFAPPTLKISSE-QSIFDINYEDLELVDYQ 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|157834186|pdb|1VZB|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Binary Complex With Dump gi|157834187|pdb|1VZC|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Binary Complex With Fdump gi|157834188|pdb|1VZD|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Ternary Complex With Fdump And Cb3717 gi|157834189|pdb|1VZE|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Ternary Complex With Dump And Cb3717 Length = 316 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + +LLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSQLLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKAPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|225619118|ref|YP_002720344.1| thymidylate synthase [Brachyspira hyodysenteriae WA1] gi|254790229|sp|C0QWM9|TYSY_BRAHW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|225213937|gb|ACN82671.1| thymidylate synthase [Brachyspira hyodysenteriae WA1] Length = 266 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 138/266 (51%), Positives = 180/266 (67%), Gaps = 2/266 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 M YLDLL+ V++ G + +DRTGVGTR FG Q+RF P++TTK+V K V+ EL Sbjct: 1 MQNYLDLLKKVLEEGEETKDRTGVGTRRIFGPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 LWFL+G +N+ +L + V IWDEWAD GELGP+YG QWR+W +GN IDQIS+IV +L Sbjct: 61 LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNIVNTL 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNI 178 R +P SRR I++AWNV ID+M LPPCH + QF V++ G + LYQRS D+FLG+PFNI Sbjct: 121 RNNPASRRIILNAWNVGEIDQMHLPPCHMMCQFSVNSKGGIITHLYQRSADLFLGVPFNI 180 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 +SY++LT +LA G E I T GD H+YNNH EQ LQLSR P + N + Sbjct: 181 SSYAILTRLLAMHSGLHASELIMTFGDAHIYNNHIEQVKLQLSREPLEQTTELFIDNRPN 240 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + S YEDF L Y+ + I A+V+V Sbjct: 241 IFSHVYEDFKLEGYKYYPTIKAEVAV 266 >gi|332638740|ref|ZP_08417603.1| thymidylate synthase [Weissella cibaria KACC 11862] Length = 318 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 140/311 (45%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V++ G + DRTG GTRS FG QMRFD+++GFPLLTTK+V + + ELLWFL Sbjct: 8 YLDLAQEVLETGHAKGDRTGTGTRSLFGRQMRFDMAEGFPLLTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +G++N+ +L H IWDEWA K+ Sbjct: 68 QGNTNIRFLLEHNNHIWDEWAFKNWIESADYTGPDMTDFGRRSLVDEAFKAQYDEQHQLF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 GELG +YG QWR W G IDQI +V ++ +P SRR IV+AW Sbjct: 128 VDRILADDAFAKQYGELGDVYGAQWRHWRKVQGGFIDQIDDVVNQIKTNPNSRRLIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV +GKLS QLYQRS D+FLG+PFNIASYSLL M+A+ G Sbjct: 188 NPEDVPSQALPPCHTLFQFYVADGKLSLQLYQRSADIFLGVPFNIASYSLLLHMVAAQTG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y+NH Q QLSR LPQ+++NP++ + + +D + Y+ Sbjct: 248 LEAGEFVHTLGDAHIYSNHIAQVTEQLSREMVELPQLVLNPDVKSIFDYTMDDIKVEGYK 307 Query: 254 PHAAILAKVSV 264 P +I A V+V Sbjct: 308 PAKSIKAPVAV 318 >gi|312872324|ref|ZP_07732394.1| thymidylate synthase [Lactobacillus iners LEAF 2062A-h1] gi|311092147|gb|EFQ50521.1| thymidylate synthase [Lactobacillus iners LEAF 2062A-h1] Length = 318 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V + + ELLWFL Sbjct: 8 YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQNDELFNIKYQEQMKIF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W G+ IDQ+ +I++ ++ +P SRR IVSAW Sbjct: 128 TEKILSDVTFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNIIEQIKTNPDSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHFEQ + QLSR+ P + +NP +L F +D L Y Sbjct: 248 LELGEFVHTLGDAHIYKNHFEQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLIDYN 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|312871389|ref|ZP_07731484.1| thymidylate synthase [Lactobacillus iners LEAF 3008A-a] gi|311093042|gb|EFQ51391.1| thymidylate synthase [Lactobacillus iners LEAF 3008A-a] Length = 318 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V + + ELLWFL Sbjct: 8 YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQNDELFNIKYQEQMKIF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W G+ IDQ+ +I++ ++ +P SRR IVSAW Sbjct: 128 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNIIEQIKTNPDSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHFEQ + QLSR+ P + +NP +L F +D L Y Sbjct: 248 LELGEFVHTLGDAHIYKNHFEQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLIDYN 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|227529200|ref|ZP_03959249.1| thymidylate synthase [Lactobacillus vaginalis ATCC 49540] gi|227350875|gb|EEJ41166.1| thymidylate synthase [Lactobacillus vaginalis ATCC 49540] Length = 320 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL L ++V+ G + DRTG GT+S FGYQMRF+L +GFPLLTTKKV + + ELLW Sbjct: 8 QQYLSLAQYVLDHGHTKSDRTGTGTKSVFGYQMRFNLEEGFPLLTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIQFLLKHKNHIWDEWAFKKWVESDEYHGPDMTDFGHRWLKDPEFKKAYLKEKR 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W +G IDQI++++ ++ P SRR IVS Sbjct: 128 DFCERIVNDDEFAKKYGDLGLVYGSQWRHWKTSNGQTIDQIANVIDQIKTTPDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDISSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q G+F+HTLGD H+Y NH Q QLSR+P P++I+ + + D L Sbjct: 248 CGLQVGDFVHTLGDAHIYLNHLSQIKEQLSRTPHKAPKLILPDEPKPIDEYEMSDIKLEG 307 Query: 252 YEPHAAILAKVSV 264 Y AI A V+V Sbjct: 308 YTHEPAIKAPVAV 320 >gi|93279921|pdb|2G86|A Chain A, L. Casei Thymidylate Synthase Y261f In Complex With Substrate, Dump Length = 316 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HL+ NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLFVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|157834185|pdb|1VZA|A Chain A, Thymidylate Synthase E60d Mutant Binary Complex With 2'- Deoxyuridine 5'-Monophosphate (Dump) Length = 316 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + +LLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSDLLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKAPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|298345140|ref|YP_003717827.1| thymidylate synthase [Mobiluncus curtisii ATCC 43063] gi|315656496|ref|ZP_07909385.1| thymidylate synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235201|gb|ADI66333.1| thymidylate synthase [Mobiluncus curtisii ATCC 43063] gi|315493055|gb|EFU82657.1| thymidylate synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 272 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 135/263 (51%), Positives = 183/263 (69%), Gaps = 2/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DLL ++ G ++ DRTG GTRS FG Q+R+DLS+GFP +TTK ++W VV ELLW Sbjct: 12 HQYEDLLADIMSHGVEKPDRTGTGTRSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G +N +L + + IWDEWAD+ G+LGPIYG QWR+WP G V DQ+ ++++L+ Sbjct: 72 FLQGGTNNRWLQENNIHIWDEWADESGDLGPIYGHQWRAWPTAAGPV-DQVKKLLETLQN 130 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV+ +D+MAL PCH FQ +V G+LS Q+YQRS D+FLG+PFNIASY Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA Q GE + T GD H+Y+NH +Q LQLSR P P + ++ + Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFPILELD-KAESIDG 249 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + ++ L +Y+ H I A V+V Sbjct: 250 YTFDMIRLANYQHHPKISAPVAV 272 >gi|256847163|ref|ZP_05552609.1| thymidylate synthase [Lactobacillus coleohominis 101-4-CHN] gi|256715827|gb|EEU30802.1| thymidylate synthase [Lactobacillus coleohominis 101-4-CHN] Length = 320 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 144/313 (46%), Positives = 185/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL R+V++ G + DRTG GTRS FGYQMRFDL KGFP+LTTKKV + + ELLW Sbjct: 8 QQYLDLARYVLENGHLKGDRTGTGTRSIFGYQMRFDLQKGFPILTTKKVAFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIRFLLQHNNHIWDEWAFKKWVTSAEYQGPDMTDFGHRWLSDPDFKEQYLAEKK 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWRSW G+ IDQI +++ ++ +P SRR IVS Sbjct: 128 QFCQRVLNDDEFAKKYGDLGLVYGSQWRSWRTSRGDTIDQIQNVINEIKKNPNSRRLIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIARE 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 + G+F+HTLGD H+YNNH +Q QL R + P++I L + +D L Sbjct: 248 CQLEVGDFVHTLGDAHIYNNHIKQIKEQLMRQVHSAPKLIFPNGTKSLDEYTVDDIKLDG 307 Query: 252 YEPHAAILAKVSV 264 Y+ AI A V+V Sbjct: 308 YQHEPAIKAPVAV 320 >gi|157833915|pdb|1TDA|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal Deletion: Role Of The C-Terminus In Alignment Of DUMP AND Ch2h4folate gi|157833916|pdb|1TDB|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal Deletion: Role Of The C-Terminus In Alignment Of DUMP AND Ch2h4folate gi|157833917|pdb|1TDC|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal Deletion: Role Of The C-Terminus In Alignment Of DUMP AND Ch2h4folate gi|157836378|pdb|2TDD|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal Deletion: Role Of The C-Terminus In Alignment Of DUMP AND Ch2h4folate Length = 315 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 145/310 (46%), Positives = 186/310 (60%), Gaps = 50/310 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVS 263 P+ AI A V+ Sbjct: 306 PYPAIKAPVA 315 >gi|157832139|pdb|1NJC|A Chain A, Thymidylate Synthase, Mutation, N229d With 2'-Deoxycytidine 5'-Monophosphate (Dcmp) gi|157832140|pdb|1NJD|A Chain A, Thymidylate Synthase, Mutation, N229d With 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 316 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF+IASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFDIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|116629487|ref|YP_814659.1| thymidylate synthase [Lactobacillus gasseri ATCC 33323] gi|311110868|ref|ZP_07712265.1| thymidylate synthase [Lactobacillus gasseri MV-22] gi|122273575|sp|Q044A1|TYSY_LACGA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116095069|gb|ABJ60221.1| thymidylate synthase [Lactobacillus gasseri ATCC 33323] gi|311066022|gb|EFQ46362.1| thymidylate synthase [Lactobacillus gasseri MV-22] Length = 318 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V + + ELLWFL Sbjct: 8 YLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L H IWDEWA Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMKKF 127 Query: 85 ------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 D+D G LG +YG QWR W +G IDQI +++ ++ PYSRR IVSAW Sbjct: 128 DERILADRDFAVKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y NHF+Q L+R P P++ +NP+ + F D L Y+ Sbjct: 248 LKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVDYK 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|259046573|ref|ZP_05736974.1| thymidylate synthase [Granulicatella adiacens ATCC 49175] gi|259036738|gb|EEW37993.1| thymidylate synthase [Granulicatella adiacens ATCC 49175] Length = 315 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 143/312 (45%), Positives = 179/312 (57%), Gaps = 50/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +LL +++ G+ + DRTG GT+S FGYQMRFDL KGFPLLTTK+V + + ELLWF Sbjct: 4 QYKELLTKILEEGTTKTDRTGTGTKSIFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWF 63 Query: 63 LRGDSNVSYLHRHGVSIWDEWA-----------------------------------DKD 87 L GD+N+ YL H IWDEWA KD Sbjct: 64 LHGDTNIKYLLEHNNHIWDEWAFERYVSSPKYTGPDMTDFGRRCLQDEAFNEVYQEVKKD 123 Query: 88 ---------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 GELG IYG QWR W G IDQI ++ L+ P SRR IVSA Sbjct: 124 FCEKILSDDAFAAEFGELGNIYGSQWRHWKTSKGETIDQIEDLLNLLKNSPDSRRMIVSA 183 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A+ + Sbjct: 184 WNPEDVPSMALPPCHTMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIANEV 243 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEF+HTLGD H+Y NH EQ QL+R LP +++ + D + Y Sbjct: 244 GLEVGEFVHTLGDAHIYLNHMEQVKTQLAREEMALPTLVLKHPEKSMFDIDVTDVVVEGY 303 Query: 253 EPHAAILAKVSV 264 + H I A ++V Sbjct: 304 QSHPTIKAPIAV 315 >gi|238852637|ref|ZP_04643047.1| thymidylate synthase [Lactobacillus gasseri 202-4] gi|238834783|gb|EEQ27010.1| thymidylate synthase [Lactobacillus gasseri 202-4] Length = 318 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 182/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V + + ELLWFL Sbjct: 8 YLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W +G IDQI +++ ++ PYSRR IVSAW Sbjct: 128 DERILADQDFAVKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y NHF+Q L+R P P++ +NP+ + F D L Y+ Sbjct: 248 LKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVDYK 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|157834023|pdb|1TSX|A Chain A, Thymidylate Synthase R179e Mutant Length = 316 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRELIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|295426056|ref|ZP_06818726.1| thymidylate synthase [Lactobacillus amylolyticus DSM 11664] gi|295064225|gb|EFG55163.1| thymidylate synthase [Lactobacillus amylolyticus DSM 11664] Length = 319 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 146/312 (46%), Positives = 185/312 (59%), Gaps = 51/312 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTG GT+S FG QMRFDLSKGFPLLTTK+V + + ELLWFL Sbjct: 8 YLDLLQKIMTEGHDKSDRTGTGTKSLFGAQMRFDLSKGFPLLTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L +H IWDEWA K+ Sbjct: 68 RGDTNIRFLLQHKNHIWDEWAFKNWVNSDEYQGPDMTDFGLRCQSDPDFNKIYQEEMKRF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGN-VIDQISSIVQSLRADPYSRRHIVSA 132 G LG +YG QWR W DGN IDQI ++++ ++ P SRR IV+A Sbjct: 128 DQRILDDEDFAKKYGNLGDVYGAQWRHWEKRDGNGFIDQIHNVIEQIKHTPDSRRMIVTA 187 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + ALPPCH +FQFY+ +GKLS QLYQRSGD+FLG+PFNIASYSLL M+A Sbjct: 188 WNPEDVPNSALPPCHVMFQFYIADGKLSVQLYQRSGDMFLGVPFNIASYSLLLNMIARET 247 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEFIHTLGD H+Y NHF+Q + LSR P PQ+ +NP+ + F D + Y Sbjct: 248 GLEVGEFIHTLGDAHIYRNHFKQVEELLSRKPYDSPQLWLNPDKKKIEDFEMSDIKVLDY 307 Query: 253 EPHAAILAKVSV 264 + H I A V+V Sbjct: 308 KHHDTIKAPVAV 319 >gi|118781473|ref|XP_311491.3| AGAP010457-PA [Anopheles gambiae str. PEST] gi|116129966|gb|EAA07160.3| AGAP010457-PA [Anopheles gambiae str. PEST] Length = 302 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 139/282 (49%), Positives = 184/282 (65%), Gaps = 21/282 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLWF 62 YL L+R +I GS R DRTGVGT S FG QMRF L G PLLTTKKV ++ V ELLWF Sbjct: 21 YLQLIRDIINKGSKRLDRTGVGTLSIFGAQMRFSLRDGIIPLLTTKKVFFRGVAEELLWF 80 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------P 102 ++G +NV L GV IWD E+ D ++G+LGP+YG QWR + Sbjct: 81 IKGSTNVKDLQAKGVRIWDGNSTREYLDSCGFTDREEGDLGPVYGFQWRHFGATYKTCHD 140 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G IDQ++ ++ ++ +PY RR I+ AWN + I MALPPCHCL QF+V +G+LSCQ Sbjct: 141 DYTGQGIDQLAEVIDKIKNNPYDRRIIMCAWNPSDIPNMALPPCHCLAQFFVSDGELSCQ 200 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS DV LG+PFNIASYSLLT M+A V G + GEFIHT GD H+Y NH + Q+ R Sbjct: 201 MYQRSADVGLGVPFNIASYSLLTHMIAHVTGLKAGEFIHTTGDTHIYLNHVDGLREQIER 260 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +P+ P ++ + + +F Y+DF + +Y P +AI K++V Sbjct: 261 TPKKFPTLVFKRKVESIDNFTYDDFEILNYNPQSAIKMKMAV 302 >gi|241781388|ref|XP_002400276.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] gi|215510710|gb|EEC20163.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] Length = 287 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 137/284 (48%), Positives = 181/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+H+++ G ++DRTGVGT S FG Q R+ L G PLLTTK+V W+ VV ELL Sbjct: 4 YQYLKTLKHILENGKKKKDRTGVGTMSIFGVQCRYSLRNGTMPLLTTKRVFWRGVVEELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR--------S 100 WFLRG ++ L G+ IWD+ + +G+LGP+YG QWR S Sbjct: 64 WFLRGSTDAKELSERGIHIWDQNGSRRFLDSLGFFDREEGDLGPVYGFQWRHFGATYRNS 123 Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY +DQI+ +V+ ++ DP RR I+ +WN I KM LPPCHCL QFYVD+ +LS Sbjct: 124 HTDYGNEGVDQITRLVEIIKNDPNDRRMILCSWNPTDIKKMVLPPCHCLAQFYVDDDELS 183 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V G + GEF+H LGD H+Y NH E QL Sbjct: 184 CQLYQRSADMGLGVPFNIASYALLTHMMAKVTGKRPGEFVHNLGDAHIYLNHVESVKQQL 243 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I ++ D+ FR +DF L Y P+ I ++SV Sbjct: 244 EREPRPFPKLRIRRDVTDIFDFRCDDFELIDYNPYPKIKMEMSV 287 >gi|149635254|ref|XP_001508361.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Ornithorhynchus anatinus] Length = 313 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 136/282 (48%), Positives = 180/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL +RH+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQVRHILRSGCKKEDRTGTGTVSVFGLQARYSLRDQFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSAKGVRIWDANGSRDFLDKHGFTSREEGDLGPVYGFQWRHFGAEYKEMNT 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++A+P RR I+ AWN I MALPPCH L QFYV NG+LSCQ Sbjct: 152 DYAGQGVDQLQKVIDTIKANPDDRRIIMCAWNPKDIPLMALPPCHALCQFYVLNGELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASYSLLT M+A + G + G+F+HTLGD H+Y NH E ++QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLEVQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH AI +++V Sbjct: 272 EPRPFPRLKILRQVETIDDFKAEDFQIEDYNPHPAIKMEMAV 313 >gi|93279924|pdb|2G8D|A Chain A, Lactobacillus Casei Thymidylate Synthase Y261w-Dump Complex Length = 316 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HL+ NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLWVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|227893421|ref|ZP_04011226.1| thymidylate synthase [Lactobacillus ultunensis DSM 16047] gi|227864836|gb|EEJ72257.1| thymidylate synthase [Lactobacillus ultunensis DSM 16047] Length = 318 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 182/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRFDLSKGFPLLTTK+V + + ELLWFL Sbjct: 8 YLDLLNKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHHNHIWDEWAFKNWVTSEEYDGPDMTDFGLRSQSDPEFNKIYQTEMKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W DG IDQI+++++ ++ P SRR IV+AW Sbjct: 128 DQRILDDEAFAVKYGNLGDVYGAQWRHWQKRDGGFIDQIANVIKQIKETPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL M+A G Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARKTG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF Q LSR P PQ+ +NP+ + F +D + Y+ Sbjct: 248 LKVGEFVHTLGDAHIYRNHFNQVKELLSRKPYDSPQLWLNPDKKHIEDFEMQDIKVIDYK 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|157831561|pdb|1JMI|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase gi|157834041|pdb|1TVW|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase Length = 316 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF+IASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFSIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|6729992|pdb|1BO7|A Chain A, Thymidylate Synthase R179t Mutant Length = 316 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRTLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|6729993|pdb|1BO8|A Chain A, Thymidylate Synthase R178t Mutant Length = 316 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYS R IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSTRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|303387989|ref|XP_003072229.1| bifunctional dihydrofolate reductase-thymidylate synthase [Encephalitozoon intestinalis ATCC 50506] gi|303388249|ref|XP_003072359.1| thymidylate synthase [Encephalitozoon intestinalis ATCC 50506] gi|303301368|gb|ADM10869.1| bifunctional dihydrofolate reductase-thymidylate synthase [Encephalitozoon intestinalis ATCC 50506] gi|303301498|gb|ADM10999.1| thymidylate synthase [Encephalitozoon intestinalis ATCC 50506] Length = 294 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 140/285 (49%), Positives = 186/285 (65%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDL+ H+++ G R+DRTG GT S FG MRF L FPLLTTK+V +K +V ELL Sbjct: 10 HQYLDLIAHILEKGVKRQDRTGTGTLSIFGASMRFSLEDNTFPLLTTKRVFYKGIVEELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWR--------SW 101 +FLR ++ + L + GV IW + K +G+LGPIYG QWR S Sbjct: 70 FFLRAQTDSAILEKKGVMIWKKNGSKQFLQSMGLDREEGDLGPIYGFQWRHFGAEYQTSS 129 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G IDQI +++S++ +P SRR +V AWN + KMALPPCH LFQF V +GKL+C Sbjct: 130 SDYKGQGIDQIRDVIESIKNNPESRRMVVCAWNPLALPKMALPPCHVLFQFNVMDGKLNC 189 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRSGD+ LG+PFNIASYSLLT+++A + G + GEF+H LGD H+Y +H + LQL Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTIIIAHLTGLRPGEFVHFLGDAHVYLDHIDSLRLQLQ 249 Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++ +NP V++ F +EDF L Y PH I +SV Sbjct: 250 RTPREFPKLFVNPKGTRVEIEDFEFEDFELVGYNPHPPIQMNMSV 294 >gi|157834021|pdb|1TSV|A Chain A, Thymidylate Synthase R179a Mutant gi|157834022|pdb|1TSW|A Chain A, Thymidylate Synthase R179a Mutant Length = 316 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRALIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|157831559|pdb|1JMG|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase Length = 316 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFGIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|195116595|ref|XP_002002839.1| GI10845 [Drosophila mojavensis] gi|193913414|gb|EDW12281.1| GI10845 [Drosophila mojavensis] Length = 310 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 137/285 (48%), Positives = 183/285 (64%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL++ +I+ G +R DRT VGTRS FG QMRF+L FPLLTTK+V ++ V EL+W Sbjct: 26 EQYLDLIKRIIENGDERMDRTKVGTRSIFGAQMRFNLRDSFPLLTTKRVFFRGVAEELIW 85 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101 F+ G ++ L + IWD E+ DK G +LGP+YG QWR + Sbjct: 86 FIAGQTDAKILQEKNIHIWDGNSTREFLDKCGHTDREVGDLGPVYGFQWRHFGAKYGKCT 145 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159 DY G IDQ+ ++ ++R DP RR I+SAWN I +MALPPCHCL QFYV G+L Sbjct: 146 DDYTGQGIDQLKQVIDTIRNDPADRRIIMSAWNPLDIPQMALPPCHCLAQFYVSQSRGEL 205 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+YNNH Q Sbjct: 206 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYNNHVNPLLEQ 265 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R PR P+++ + ++ FRYEDF + Y P+ I +++V Sbjct: 266 MKREPRPFPKLVFKRQVTNIEDFRYEDFEIVGYNPYGKIQMEMAV 310 >gi|226500582|ref|NP_001152378.1| LOC100286018 [Zea mays] gi|195655695|gb|ACG47315.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea mays] Length = 523 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 134/283 (47%), Positives = 183/283 (64%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L+ +I+FG+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW Sbjct: 241 YQYLNLVEDIIRFGAQKNDRTGTGTLSKFGCQMRFNLRKIFPLLTTKRVFWRGVVEELLW 300 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ G +N L G+ IWD E+ D+ +G+LGP+YG QWR + Sbjct: 301 FISGSTNAKVLQEKGIHIWDGNASREYLDRIGLAHREEGDLGPVYGFQWRHFGAEYTDMH 360 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + + KMALPPCH QFYV+NG+LSC Sbjct: 361 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVENGELSC 420 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G+F+H +GD H+Y NH + Q+ Sbjct: 421 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRNHVRALEEQIQ 480 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP+ D+ SF DF L Y+PH + K++V Sbjct: 481 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKLEMKMAV 523 >gi|326917497|ref|XP_003205035.1| PREDICTED: LOW QUALITY PROTEIN: thymidylate synthase-like [Meleagris gallopavo] Length = 397 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 138/280 (49%), Positives = 179/280 (63%), Gaps = 20/280 (7%) Query: 5 LDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR 64 L +RH+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF++ Sbjct: 118 LQQVRHILQHGXPKEDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWFIK 177 Query: 65 GDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PDY 104 G +N L GV IWD E+ DK +G+LGP+YG QWR + DY Sbjct: 178 GSTNAKELSAKGVKIWDANGSREFLDKQGFCSREEGDLGPVYGFQWRHFGAEYKDMHTDY 237 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 +DQ+ +++ ++ +P RR I+ AWN I MALPPCH L QFYV NG+LSCQLY Sbjct: 238 SNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQLY 297 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E +QL R P Sbjct: 298 QRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQREP 357 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R LP++ I + D+ F+ EDF + Y PH I +++V Sbjct: 358 RPLPKLKILRKVEDISDFKAEDFQIEDYNPHPPIKMEMAV 397 >gi|157831558|pdb|1JMF|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase gi|157834039|pdb|1TVU|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase Length = 316 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFAIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|93279923|pdb|2G8A|A Chain A, Lactobacillus Casei Y261m In Complex With Substrate, Dump Length = 316 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HL NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLMVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|12045082|ref|NP_072893.1| thymidylate synthase [Mycoplasma genitalium G37] gi|1351340|sp|P47469|TYSY_MYCGE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|3844830|gb|AAC71448.1| thymidylate synthase [Mycoplasma genitalium G37] gi|166078915|gb|ABY79533.1| thymidylate synthase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 287 Score = 281 bits (720), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 136/293 (46%), Positives = 189/293 (64%), Gaps = 35/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL +V+ G R++RT T S FGYQM+FDL+ FPLLTTKKV+WK++VHELL Sbjct: 1 MKQYLDLASYVLANGKKRKNRTDTDTLSVFGYQMKFDLTNSFPLLTTKKVNWKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL +GV+IW+EW A + +LG Sbjct: 61 WFIKGDTNIKYLVDNGVNIWNEWPYENFKKSPSFQNETLQEFILKVKTDNEFAKQFADLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ N +DQ+ ++Q ++ +P SRR IVS+WN + ++KMAL PCH LFQ Sbjct: 121 PVYGKQWRNF-----NGVDQLKKVIQEIKENPNSRRLIVSSWNPSELEKMALAPCHSLFQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV+ KLS QLYQRSGD+FLG+PFNIASY+LL ++A + G FIHTLGD H+Y N Sbjct: 176 FYVEEDKLSLQLYQRSGDIFLGVPFNIASYALLVYLVAHETKLKPGYFIHTLGDAHIYEN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ LQL+R+ PQ+++ + + ++ ++D L Y H I +V+V Sbjct: 236 HIEQIKLQLTRTTLDPPQVVLKSD-KSIFAYSFDDIELVGYNYHPFIYGRVAV 287 >gi|315655589|ref|ZP_07908487.1| thymidylate synthase [Mobiluncus curtisii ATCC 51333] gi|315489653|gb|EFU79280.1| thymidylate synthase [Mobiluncus curtisii ATCC 51333] Length = 272 Score = 281 bits (719), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 136/264 (51%), Positives = 184/264 (69%), Gaps = 4/264 (1%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DLL ++ G D+ DRTG GT S FG Q+R+DLS+GFP +TTK ++W VV ELLW Sbjct: 12 HQYEDLLADIMSQGIDKSDRTGTGTHSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G +N +L + + IWDEWA++ G+LGPIYG QWR+WP G V DQ+ ++++L+ Sbjct: 72 FLQGGTNNHWLQENNIHIWDEWANESGDLGPIYGHQWRAWPTAAGPV-DQVKKLLETLQN 130 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV+ +D+MAL PCH FQ +V G+LS Q+YQRS D+FLG+PFNIASY Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL- 240 +LLT MLA Q GE + T GD H+Y+NH +Q LQLSR P P I+ + D + Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFP--ILELDKADSID 248 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++ L++Y+ H I A V+V Sbjct: 249 GYTFDMIRLKNYQHHPKISAPVAV 272 >gi|93279922|pdb|2G89|A Chain A, L. Casei Thymidylate Synthase Y261a In Complex With Substrate, Dump Length = 316 Score = 281 bits (719), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HL NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLAVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|161507385|ref|YP_001577339.1| thymidylate synthase [Lactobacillus helveticus DPC 4571] gi|260101724|ref|ZP_05751961.1| thymidylate synthase [Lactobacillus helveticus DSM 20075] gi|172048271|sp|A8YUW0|TYSY_LACH4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|160348374|gb|ABX27048.1| Thymidylate synthase [Lactobacillus helveticus DPC 4571] gi|260084460|gb|EEW68580.1| thymidylate synthase [Lactobacillus helveticus DSM 20075] gi|328467983|gb|EGF39009.1| thymidylate synthase [Lactobacillus helveticus MTCC 5463] Length = 318 Score = 281 bits (719), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 182/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G + DRTG GTRS FG QMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 8 YLDLLQKIMSEGHGKDDRTGTGTRSYFGAQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVNSSEYQGPDMTDFGLRSQSDPEFNKIYQAEMKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W +G IDQI+ +++ ++ P SRR IV+AW Sbjct: 128 DQRILDDEDFAKKYGNLGDVYGAQWRHWEKREGGFIDQIADVIKQIKETPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNLIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEFIHTLGD H+Y NH +Q + LSR P PQ+ +NP ++ F +D + Y+ Sbjct: 248 LQVGEFIHTLGDAHIYRNHLKQVEELLSRKPYDSPQLWLNPEKKNIADFEMKDIKVVDYQ 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|296125219|ref|YP_003632471.1| thymidylate synthase [Brachyspira murdochii DSM 12563] gi|296017035|gb|ADG70272.1| thymidylate synthase [Brachyspira murdochii DSM 12563] Length = 266 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 137/266 (51%), Positives = 178/266 (66%), Gaps = 2/266 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 M YL+LL+ V++ G + DRTGVGTR F Q+RF P++TTK+V K V+ EL Sbjct: 1 MKNYLELLKKVLEEGEETLDRTGVGTRRIFAPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 LWFL+G +N+ +L + V IWDEWAD GELGP+YG QWR+W +GN IDQIS+IV +L Sbjct: 61 LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNIVNTL 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNI 178 R +P SRR+I++AWNV IDKM LPPCH + QF V+N G + LYQRS D+FLG+PFNI Sbjct: 121 RNNPTSRRNILNAWNVGEIDKMHLPPCHMMCQFSVNNKGGIIAHLYQRSADLFLGVPFNI 180 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 +SY++LT +LA G E I T GD H+YNNH EQ LQLSR P + N + Sbjct: 181 SSYAILTRLLAMHSGLHASELIMTFGDAHIYNNHIEQVKLQLSREPYENTTELFIENRPN 240 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + S YEDF L Y+ + I +V+V Sbjct: 241 IFSHVYEDFRLEGYKYYPTIKGEVAV 266 >gi|195470923|ref|XP_002087756.1| GE14974 [Drosophila yakuba] gi|194173857|gb|EDW87468.1| GE14974 [Drosophila yakuba] Length = 321 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 141/284 (49%), Positives = 183/284 (64%), Gaps = 22/284 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLLR +I G R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V ELLWF Sbjct: 38 QYLDLLRQIIANGEQRMDRTQVGTLSLFGSQMRFDMRQSFPLLTTKRVFFRAVAEELLWF 97 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------P 102 + G ++ L V IWD E+ DK G+LGP+YG QWR + Sbjct: 98 VAGKTDAKLLQAKNVHIWDGNSTREFLDKLGFTERAVGDLGPVYGFQWRHFGAEYATCDD 157 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLS 160 DY G IDQ+ ++ +++ +P RR I+SAWN I KMALPPCHCL QFYV G+LS Sbjct: 158 DYSGKGIDQLRQVIDTIKNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGELS 217 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E QL Sbjct: 218 CQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQL 277 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++II + D+ FR+EDF + Y P+ I ++V Sbjct: 278 QRTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPYPKIKMDMAV 321 >gi|229822730|ref|ZP_04448800.1| hypothetical protein GCWU000282_00018 [Catonella morbi ATCC 51271] gi|229787543|gb|EEP23657.1| hypothetical protein GCWU000282_00018 [Catonella morbi ATCC 51271] Length = 313 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 146/314 (46%), Positives = 185/314 (58%), Gaps = 51/314 (16%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L+R ++ G + DRTGVGT+S FGYQMRFDLS GFP++TTK+V + + ELL Sbjct: 1 MQQYQELVRKILAEGHVKTDRTGVGTKSLFGYQMRFDLSHGFPMVTTKRVPFGLIKSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFLRGD+NV YL H IWDEWA Sbjct: 61 WFLRGDTNVRYLLEHNNHIWDEWAFKRYVESPDYHGPDMTDFGLRAVADPDFNEIYQQEL 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 ++ G LG +YG QWRSWP +G +DQIS ++ ++ P SRR IV Sbjct: 121 AAFNERVLTDDDFAERYGNLGNVYGAQWRSWPLRNGETLDQISQLIDMIKHSPDSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDVPSMALPPCHTLFQFYVYDGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAK 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 + G+F+HTLGD HLY NH E A+ LSR P+ LPQ+ I+ + + L+ Sbjct: 241 ECDLEVGDFVHTLGDAHLYLNHLEAAETLLSREPKPLPQLEID-DFEQFDQVSTDQIRLQ 299 Query: 251 SYEPHAAILAKVSV 264 YEP I A ++V Sbjct: 300 GYEPWPTIKAPIAV 313 >gi|327269847|ref|XP_003219704.1| PREDICTED: thymidylate synthase-like [Anolis carolinensis] Length = 307 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 134/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+ ++ +++FG + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 26 QYLNQIQQILRFGHKKEDRTGTGTLSLFGMQARYSLRDDFPLLTTKRVFWKGVLEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------P 102 ++G +N L GV IW+ + +G+LGP+YG QWR + Sbjct: 86 IKGSTNAKELSTKGVKIWEANGSRQFLDQQGFLSREEGDLGPVYGFQWRHFGAEYKDMNT 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ ++R +P RR I+ AWN I MALPPCH L QFYV NG+LSCQ Sbjct: 146 DYTGQGVDQLQQVIDTIRNNPDDRRIIMCAWNPKDISAMALPPCHALCQFYVVNGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E +QL R Sbjct: 206 LYQRSGDMGLGVPFNIASYSLLTSMIAHVTGLKPGEFIHTLGDAHIYLNHIEPLKIQLQR 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + ++ F+ +DF + Y PH I +++V Sbjct: 266 QPRPFPKLKILRKVENINDFKADDFEIEGYNPHPTIKMEMAV 307 >gi|227877073|ref|ZP_03995156.1| thymidylate synthase [Lactobacillus crispatus JV-V01] gi|256850330|ref|ZP_05555759.1| thymidylate synthase [Lactobacillus crispatus MV-1A-US] gi|262045992|ref|ZP_06018956.1| thymidylate synthase [Lactobacillus crispatus MV-3A-US] gi|227863321|gb|EEJ70757.1| thymidylate synthase [Lactobacillus crispatus JV-V01] gi|256712967|gb|EEU27959.1| thymidylate synthase [Lactobacillus crispatus MV-1A-US] gi|260573951|gb|EEX30507.1| thymidylate synthase [Lactobacillus crispatus MV-3A-US] Length = 318 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 182/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV + + ELLWFL Sbjct: 8 YLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWIESAEYQGADMTDFGLRSQSDPEFNQVYQAEMKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W G IDQI+++++ ++ P SRR IV+AW Sbjct: 128 DQRILDDPAFAQKYGNLGDVYGAQWRHWEKRSGGFIDQIANVIKQIKETPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL M+A G Sbjct: 188 NPEDIPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF Q LSR+P P++ +NP + F +D + +Y+ Sbjct: 248 LKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLNYQ 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|6980894|pdb|1BP0|A Chain A, Thymidylate Synthase R23i Mutant Length = 316 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + D T GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDITHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|309809295|ref|ZP_07703164.1| thymidylate synthase [Lactobacillus iners SPIN 2503V10-D] gi|308170408|gb|EFO72432.1| thymidylate synthase [Lactobacillus iners SPIN 2503V10-D] Length = 318 Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V + + ELLWFL Sbjct: 8 YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMKIF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W G+ IDQ+ ++++ ++ +P SRR IVSAW Sbjct: 128 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF+Q + QLSR+ P + +NP +L F +D L Y Sbjct: 248 LELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLIDYN 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|157832137|pdb|1NJA|A Chain A, Thymidylate Synthase, Mutation, N229c With 2'-Deoxycytidine 5'-Monophosphate (Dcmp) gi|157832138|pdb|1NJB|A Chain A, Thymidylate Synthase gi|157834040|pdb|1TVV|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase Length = 316 Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFCIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|282850793|ref|ZP_06260167.1| thymidylate synthase [Lactobacillus gasseri 224-1] gi|282557745|gb|EFB63333.1| thymidylate synthase [Lactobacillus gasseri 224-1] Length = 318 Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 182/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V + + ELLWFL Sbjct: 8 YLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L H IWDEWA Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMKKF 127 Query: 85 ------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 D+D G LG +Y QWR W +G IDQI +++ ++ PYSRR IVSAW Sbjct: 128 DERILADRDFAVKFGNLGDVYAAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y NHF+Q L+R P P++ +NP+ + F D L Y+ Sbjct: 248 LKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVDYK 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|323941564|gb|EGB37745.1| thymidylate synthase [Escherichia coli E482] Length = 219 Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 124/202 (61%), Positives = 161/202 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHT 202 Y+LL M+A + G+F+ T Sbjct: 181 YALLVHMMAQQCDLEVGDFVWT 202 >gi|262198580|ref|YP_003269789.1| thymidylate synthase [Haliangium ochraceum DSM 14365] gi|262081927|gb|ACY17896.1| thymidylate synthase [Haliangium ochraceum DSM 14365] Length = 262 Score = 281 bits (718), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 141/264 (53%), Positives = 173/264 (65%), Gaps = 2/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+R +++ G R DRTG GT S FG Q+R+DL +GFPLLTTKKV + +VVHELL Sbjct: 1 MTPYLDLVRRILEHGERREDRTGTGTLSLFGAQLRYDLREGFPLLTTKKVLFSAVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG +N+ IW+ WAD GELGPIYG QWRSW DG+ IDQI + +R Sbjct: 61 WFLRGATNIHDGLAEHTPIWNAWADDSGELGPIYGAQWRSWRGPDGDSIDQIQGALDLIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV + +MALPPCH LFQFYV L CQLYQRS D+ LG+PFNIAS Sbjct: 121 TDPGSRRIIVSAWNVGELARMALPPCHLLFQFYVSGRHLDCQLYQRSADMALGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + FIHTLGD H+Y NH + + QL R+P P++ I L Sbjct: 181 YALLLSMMAQSCDLEPRYFIHTLGDAHVYLNHVDGLERQLERTPYARPRVRIADK--SLF 238 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +ED L Y+ H I +V+V Sbjct: 239 ELGFEDIELEGYQHHPFIKFEVAV 262 >gi|157831560|pdb|1JMH|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase Length = 316 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFIIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|309803972|ref|ZP_07698055.1| thymidylate synthase [Lactobacillus iners LactinV 11V1-d] gi|308163974|gb|EFO66238.1| thymidylate synthase [Lactobacillus iners LactinV 11V1-d] Length = 318 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V + + ELLWFL Sbjct: 8 YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMKIF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W G+ IDQ+ ++++ ++ +P SRR IVSAW Sbjct: 128 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF+Q + QLSR+ P + +NP +L F +D L Y Sbjct: 248 LELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLIDYN 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|327440143|dbj|BAK16508.1| thymidylate synthase [Solibacillus silvestris StLB046] Length = 325 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 140/320 (43%), Positives = 188/320 (58%), Gaps = 57/320 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 H YL+LL++++ G+D+ DRTG GTRS FGYQMRF+L +GFPLLTTK+V +K V ELLW Sbjct: 6 HTYLNLLQYILDNGTDKSDRTGTGTRSVFGYQMRFNLQEGFPLLTTKRVPFKLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL ++ IWDEWA Sbjct: 66 FIKGDTNIRYLLQNNNHIWDEWAFKKWVESEEYGGPDMSDFGRRSLIDEAFNVQYQKELS 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W +G IDQ+ + ++ +P SRR IV+ Sbjct: 126 TFCERVLQDDEFASKYGDLGNVYGKQWRNWTTSEGESIDQLQDAIDLIKHNPDSRRIIVN 185 Query: 132 AWNVA-LID------KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 AWN +ID K ALPPCH +FQFYV GKLSC L QRS D FLG+PFNIASY+LL Sbjct: 186 AWNPEDVIDAGGKGSKAALPPCHAMFQFYVAEGKLSCMLTQRSADTFLGVPFNIASYALL 245 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRY 244 T ++A G + GEF+H++ D H+Y+NH EQ QL+R P+ LP + +N + F Sbjct: 246 THLIAHECGLEVGEFVHSMADTHIYSNHLEQVKEQLAREPKQLPTLKLNLEKQSIFDFEM 305 Query: 245 EDFTLRSYEPHAAILAKVSV 264 ED +L Y PH +I A ++V Sbjct: 306 EDISLEGYHPHPSIKAPIAV 325 >gi|256843019|ref|ZP_05548507.1| thymidylate synthase [Lactobacillus crispatus 125-2-CHN] gi|312977199|ref|ZP_07788947.1| thymidylate synthase [Lactobacillus crispatus CTV-05] gi|256614439|gb|EEU19640.1| thymidylate synthase [Lactobacillus crispatus 125-2-CHN] gi|310895630|gb|EFQ44696.1| thymidylate synthase [Lactobacillus crispatus CTV-05] Length = 318 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 181/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV + + ELLWFL Sbjct: 8 YLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVQSPEYQGPDMTNFGLRSQSDPEFNQVYQAEMKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W G IDQI+ +++ ++ P SRR IV+AW Sbjct: 128 DQRILDDPAFAQKYGNLGDVYGAQWRHWEKRTGGFIDQIADVIKQIKETPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL M+A G Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF Q LSR+P P++ +NP + F +D + +Y+ Sbjct: 248 LKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLNYQ 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|293380554|ref|ZP_06626614.1| thymidylate synthase [Lactobacillus crispatus 214-1] gi|290922892|gb|EFD99834.1| thymidylate synthase [Lactobacillus crispatus 214-1] Length = 318 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 181/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV + + ELLWFL Sbjct: 8 YLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIRFLLEHNNYIWDEWAFKNWIESAEYQGADMTDFGLRSQSDPEFNQVYQAEMKKF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W G IDQI+ +++ ++ P SRR IV+AW Sbjct: 128 DQRILDDPAFAQKYGNLGDVYGAQWRHWKKRTGGFIDQIADVIKQIKETPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL M+A G Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF Q LSR+P P++ +NP + F +D + +Y+ Sbjct: 248 LKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLNYQ 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|156406767|ref|XP_001641216.1| predicted protein [Nematostella vectensis] gi|156228354|gb|EDO49153.1| predicted protein [Nematostella vectensis] Length = 306 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 133/283 (46%), Positives = 184/283 (65%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLD++R++++ G+ + DRTG GT+S FG QMRF L G FPLLTTK+V W+ V ELLW Sbjct: 24 QYLDMIRYIMENGTVKTDRTGTGTKSVFGAQMRFSLRDGVFPLLTTKRVFWRGVAEELLW 83 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101 F++G +N L + IWD + +G+LGP+YG QWR + Sbjct: 84 FVKGCTNAKVLADKNIHIWDANGSRGFLDRQGLSHREEGDLGPVYGFQWRHFGAKYVDMH 143 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ +P RR I+ AWN + I MALPPCH QFYV NG+LSC Sbjct: 144 TDYTGQGVDQLAQVIDKIKNNPDDRRIIMLAWNPSDIPLMALPPCHAFVQFYVANGELSC 203 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFNIASYSLLT M+A V G + G+F+H+LGD H+Y NHFE + QL Sbjct: 204 QLYQRSGDMGLGVPFNIASYSLLTYMIAHVCGLKPGDFVHSLGDAHVYLNHFEALEEQLK 263 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++I + D+ F ++DF + Y+PH I +++V Sbjct: 264 REPRAFPSLVIKRQVDDIDQFTFDDFEIVGYKPHPKIKMEMAV 306 >gi|317495262|ref|ZP_07953632.1| thymidylate synthase [Gemella moribillum M424] gi|316914684|gb|EFV36160.1| thymidylate synthase [Gemella moribillum M424] Length = 310 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 141/312 (45%), Positives = 192/312 (61%), Gaps = 56/312 (17%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL+L + +++ G + DRTGVGT+S FGYQM+FDL+KGFPLLTTKK+++ V ELLWF Sbjct: 5 EYLNLCKTILENGITKDDRTGVGTKSIFGYQMKFDLNKGFPLLTTKKINFNLVWSELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWA------------------------DKD----------- 87 ++GD+N+ +L + +IW+EWA DKD Sbjct: 65 IKGDTNIKFLLENKNNIWNEWAFKKWIESEEYTGPDMTDFGHRVLKDKDFAEEYKKQMNI 124 Query: 88 ---------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 G+LG +YG QWR++ N IDQ+ ++++ ++ +P SRR IVSA Sbjct: 125 FKENILNDDNFSTKFGDLGNVYGKQWRNF-----NGIDQLKNVIEQIKINPSSRRLIVSA 179 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + +D MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASYSLLT+++A Sbjct: 180 WNPSEVDTMALPPCHTMFQFYVSDGKLSCQLYQRSADVFLGVPFNIASYSLLTILIAKEC 239 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEF+HTLGD H+Y NHFEQ Q+SR LP + +N + + D L Y Sbjct: 240 GLEVGEFVHTLGDAHIYVNHFEQVKEQMSRDAFKLPSLRLNE-FDSIFNLEISDVELIDY 298 Query: 253 EPHAAILAKVSV 264 E H I A ++V Sbjct: 299 ESHPFIKAPIAV 310 >gi|6729893|pdb|1BPJ|A Chain A, Thymidylate Synthase R178t, R179t Double Mutant Length = 316 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYS IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSTTLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|126321851|ref|XP_001368094.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Monodelphis domestica] Length = 335 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 134/282 (47%), Positives = 180/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H++++GS + DRTG GT S FG Q R++L FPLLTTK+V WK V+ ELLWF Sbjct: 54 QYLQQIEHILQYGSKKNDRTGTGTMSVFGMQARYNLRGEFPLLTTKRVFWKGVLEELLWF 113 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------P 102 +RG +N L GV IWD E+ D ++G+LGP+YG QWR + Sbjct: 114 IRGCTNGKELSAKGVKIWDANGSREFLDNLGLTQREEGDLGPVYGFQWRHFGAEYKEMNT 173 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ ++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 174 DYSGQGVDQLQKVIDKIKTNPDDRRLIMCAWNPKDLPLMALPPCHALCQFYVANGELSCQ 233 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASYSLLT M+A + G + G+F+H+LGD H+Y NH E +QL R Sbjct: 234 LYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFVHSLGDAHVYMNHIEPLKIQLQR 293 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I ++V Sbjct: 294 EPRPFPKLKILRKVESIDDFKAEDFLIEGYNPHPTIKMDMAV 335 >gi|330859629|emb|CBX69968.1| thymidylate synthase [Yersinia enterocolitica W22703] Length = 219 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 127/210 (60%), Positives = 160/210 (76%), Gaps = 1/210 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S +VQ L+ Sbjct: 61 WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 Y+LL M+A G+F+ T G + Y Sbjct: 181 YALLVHMMAQQCDLAVGDFVWT-GAIRTYT 209 >gi|139472812|ref|YP_001129361.1| ORF70 [Human herpesvirus 8] gi|6686050|sp|P90463|TYSY_HHV8P RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|1718263|gb|AAC57092.1| ORF 70 [Human herpesvirus 8 type M] gi|1778600|gb|AAC56948.1| thymidylate synthase homolog [Human herpesvirus 8] gi|2246548|gb|AAB62673.1| ORF 70 [Human herpesvirus 8] gi|3551759|gb|AAC34940.1| thymidylate synthase [Human herpesvirus 8] gi|87196833|gb|ABD28859.1| ORF70 [Human herpesvirus 8] gi|261853484|gb|ACY00406.1| ORF70 [Human herpesvirus 8] gi|312275152|gb|ADQ57889.1| ORF70 protein [Human herpesvirus 8] Length = 337 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 143/282 (50%), Positives = 182/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL LR ++ GSDR DRTG+GT S FG Q R+ L FPLLTTK+V W+ VV ELLWF Sbjct: 56 QYLRQLREILCRGSDRLDRTGIGTLSLFGMQARYSLRDHFPLLTTKRVFWRGVVQELLWF 115 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 L+G ++ L R GV IWD+ ++ G+LGP+YG QWR + Sbjct: 116 LKGSTDSRELSRTGVKIWDKNGSREFLAGRGLAHRREGDLGPVYGFQWRHFGAAYVDADA 175 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G DQ+S IV ++ +P+ RR I+ AWN A + MALPPCH L QFYV +G+LSCQ Sbjct: 176 DYTGQGFDQLSYIVDLIKNNPHDRRIIMCAWNPADLSLMALPPCHLLCQFYVADGELSCQ 235 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASYSLLT MLA V G + GEFIHTLGD H+Y H E LQL+R Sbjct: 236 LYQRSGDMGLGVPFNIASYSLLTYMLAHVTGLRPGEFIHTLGDAHIYKTHIEPLRLQLTR 295 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I ++ + F +DF L Y PH I +++V Sbjct: 296 TPRPFPRLEILRSVSSMEEFTPDDFRLVDYCPHPTIRMEMAV 337 >gi|242068437|ref|XP_002449495.1| hypothetical protein SORBIDRAFT_05g016730 [Sorghum bicolor] gi|241935338|gb|EES08483.1| hypothetical protein SORBIDRAFT_05g016730 [Sorghum bicolor] Length = 521 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 133/283 (46%), Positives = 181/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L+ +I+ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW Sbjct: 239 YQYLNLVEDIIRSGAQKNDRTGTGTMSKFGCQMRFNLRKNFPLLTTKRVFWRGVVEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+ G +N L G+ IWD E+ D ++G+LGP+YG QWR + Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + + KMALPPCH QFYV+NG+LSC Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIIMSAWNPSDLKKMALPPCHMFAQFYVENGELSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G+F+H +GD H+Y H + Q+ Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRTHVRALEEQIQ 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP+ D+ SF DF L Y+PH I K++V Sbjct: 479 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKIEMKMAV 521 >gi|255077932|ref|XP_002502546.1| bifunctional dihydrofolate reductase-thymidylate synthase [Micromonas sp. RCC299] gi|226517811|gb|ACO63804.1| bifunctional dihydrofolate reductase-thymidylate synthase [Micromonas sp. RCC299] Length = 523 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 130/282 (46%), Positives = 183/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL++ +++ G+ + DRTG GT S FG QMRFDL + FPLLTTK+V W+ V EL+WF Sbjct: 242 QYLDLIKEIMEEGNVKGDRTGTGTISKFGCQMRFDLRRSFPLLTTKRVFWRGVAEELIWF 301 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------P 102 ++G ++ L + IWD E+ D ++G+LGP+YG QWR + Sbjct: 302 VKGCTSAKELQDKDIHIWDGNGSREYLDSVGLGHREEGDLGPVYGFQWRHFGAEYKDMHA 361 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ++ ++ ++ +P RR +++AWN A + +MALPPCH QFYV NG+LSCQ Sbjct: 362 DYTGQGVDQLAEVIDKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSCQ 421 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H GD H+Y+NH E QL Sbjct: 422 MYQRSCDMGLGVPFNIASYSLLTCMVAQVCGLKPGDFVHCCGDTHVYSNHVEPLYKQLEN 481 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P + INP D+ SF + DF + Y+PH I +++V Sbjct: 482 EPRPFPTLKINPEKKDIDSFEFSDFEIVDYDPHPKIAMQMAV 523 >gi|260783288|ref|XP_002586708.1| hypothetical protein BRAFLDRAFT_77468 [Branchiostoma floridae] gi|229271831|gb|EEN42719.1| hypothetical protein BRAFLDRAFT_77468 [Branchiostoma floridae] Length = 294 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 135/283 (47%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLDL+RH++ G + DRTG GT S FG Q R+ L FPLLTTK+V W+ V ELLW Sbjct: 12 YQYLDLVRHILDCGQRKDDRTGTGTLSVFGAQCRYSLRGQFPLLTTKRVFWRGVAEELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101 F+RG +N L V IWD +D G+LGP+YG QWR + Sbjct: 72 FVRGCTNGKELSDKKVHIWDANGSRDFLDKRGLSHYEEGDLGPVYGFQWRHFGAEYKDRY 131 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ +++ DP +RR I+SAWN + KMALPPCH QFYV NG+LSC Sbjct: 132 TDYTGQGVDQLAQVIHTIKTDPDNRRIIMSAWNPPDLPKMALPPCHAFVQFYVCNGELSC 191 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD LG+PFNIASYSLLT M+A + G + G+F+HTLGD H+Y NH + QL Sbjct: 192 QLYQRSGDTGLGVPFNIASYSLLTYMIAHITGLKPGDFVHTLGDAHVYVNHVDALKEQLK 251 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I + ++ F+ EDF + Y+PH I +++V Sbjct: 252 REPRPFPTLNIKRQVENIDDFKMEDFEIVGYKPHPKISMEMAV 294 >gi|326501368|dbj|BAJ98915.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 516 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 132/283 (46%), Positives = 182/283 (64%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +++ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ V+ ELLW Sbjct: 234 YQYLNLVQDILRTGARKNDRTGTGTISKFGCQMRFNLRKNFPLLTTKRVFWRGVLEELLW 293 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+ G +N L + IWD E+ D ++G+LGP+YG QWR + Sbjct: 294 FISGSTNAKVLQEKNIRIWDGNASREYLDSIGLSQREEGDLGPVYGFQWRHFGAEYSDMH 353 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ++ ++ ++ +P RR I+SAWN + KMALPPCH QFYV+NG+LSC Sbjct: 354 ADYTGKGFDQLADVINKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 413 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V GEF+H +GD H+Y+ H + + QL Sbjct: 414 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGEFVHVIGDAHVYSTHVQALEEQLQ 473 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP D+ SF DF L Y+PH I K++V Sbjct: 474 KQPKPFPILKINPLKKDIDSFVASDFKLACYDPHQKIEMKMAV 516 >gi|309807223|ref|ZP_07701195.1| thymidylate synthase [Lactobacillus iners LactinV 03V1-b] gi|312875520|ref|ZP_07735523.1| thymidylate synthase [Lactobacillus iners LEAF 2053A-b] gi|315653456|ref|ZP_07906377.1| thymidylate synthase [Lactobacillus iners ATCC 55195] gi|325911481|ref|ZP_08173892.1| thymidylate synthase [Lactobacillus iners UPII 143-D] gi|325912868|ref|ZP_08175246.1| thymidylate synthase [Lactobacillus iners UPII 60-B] gi|329921037|ref|ZP_08277562.1| thymidylate synthase [Lactobacillus iners SPIN 1401G] gi|308166361|gb|EFO68568.1| thymidylate synthase [Lactobacillus iners LactinV 03V1-b] gi|311089031|gb|EFQ47472.1| thymidylate synthase [Lactobacillus iners LEAF 2053A-b] gi|315489147|gb|EFU78788.1| thymidylate synthase [Lactobacillus iners ATCC 55195] gi|325476681|gb|EGC79836.1| thymidylate synthase [Lactobacillus iners UPII 143-D] gi|325477861|gb|EGC80995.1| thymidylate synthase [Lactobacillus iners UPII 60-B] gi|328935107|gb|EGG31592.1| thymidylate synthase [Lactobacillus iners SPIN 1401G] Length = 318 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 185/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V + + ELLWFL Sbjct: 8 YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMKIF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W G+ IDQ+ ++++ ++ +P SRR IVSAW Sbjct: 128 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF+Q + QLSR+ P + +NP +L F +D L Y Sbjct: 248 LELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLIDYN 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|302191399|ref|ZP_07267653.1| thymidylate synthase [Lactobacillus iners AB-1] gi|309805343|ref|ZP_07699393.1| thymidylate synthase [Lactobacillus iners LactinV 09V1-c] gi|309807682|ref|ZP_07701621.1| thymidylate synthase [Lactobacillus iners LactinV 01V1-a] gi|312873927|ref|ZP_07733963.1| thymidylate synthase [Lactobacillus iners LEAF 2052A-d] gi|308165343|gb|EFO67576.1| thymidylate synthase [Lactobacillus iners LactinV 09V1-c] gi|308169056|gb|EFO71135.1| thymidylate synthase [Lactobacillus iners LactinV 01V1-a] gi|311090476|gb|EFQ48884.1| thymidylate synthase [Lactobacillus iners LEAF 2052A-d] Length = 318 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 185/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V + + ELLWFL Sbjct: 8 YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMNIF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W G+ IDQ+ ++++ ++ +P SRR IVSAW Sbjct: 128 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF+Q + QLSR+ P + +NP +L F +D L Y Sbjct: 248 LELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLIDYN 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|329667138|gb|AEB93086.1| thymidylate synthase [Lactobacillus johnsonii DPC 6026] Length = 318 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 180/311 (57%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ + + ELLWFL Sbjct: 8 YLDLLSKIMNEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L H IWDEWA Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVESSEYQGPDMTNFGLRSQEDPEFKKIYQEEMEKF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G LG +YG QWR W +G IDQI +++ ++ PYSRR IVSAW Sbjct: 128 DQKVLADQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL ++A G Sbjct: 188 NPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y NHF Q L+RS P + +NP+ + F +D L +Y Sbjct: 248 LKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLINYR 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|241854848|ref|XP_002415983.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] gi|215510197|gb|EEC19650.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] Length = 287 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 136/284 (47%), Positives = 179/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+H+++ G + DRTGVGT FG Q R+ L G PLLTTK+V W+ VV ELL Sbjct: 4 YQYLKTLKHILENGKKKEDRTGVGTMLIFGVQCRYSLRNGTMPLLTTKRVFWRGVVEELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR--------S 100 WFLRG ++ L G+ IWD+ + +G+LGP+YG QWR S Sbjct: 64 WFLRGSTDAKELSERGIHIWDQNGSRRFLDSLGFFDREEGDLGPVYGFQWRHFGATYRNS 123 Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY +DQI+ +V+ ++ DP RR I+ +WN I KM LPPCHCL QFYVD+ +LS Sbjct: 124 HTDYGNEGVDQITRLVEIIKNDPNDRRMILCSWNPTDIKKMVLPPCHCLAQFYVDDDELS 183 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V G + GEF+H LGD H+Y NH E QL Sbjct: 184 CQLYQRSADMGLGVPFNIASYALLTHMMAKVTGKRPGEFVHNLGDAHIYLNHVESVKQQL 243 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I ++ D+ FR +DF L Y P+ I ++SV Sbjct: 244 EREPRPFPKLRIRRDVTDIFDFRCDDFELIDYNPYPKIKMEMSV 287 >gi|126640531|ref|YP_001083515.1| thymidylate synthase [Acinetobacter baumannii ATCC 17978] Length = 247 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 136/247 (55%), Positives = 173/247 (70%), Gaps = 16/247 (6%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDG----- 88 MRFDLSKGFPLLTTKKVH++S+V ELLWFL+GD+NV YL + V+IWDEWA + Sbjct: 1 MRFDLSKGFPLLTTKKVHFRSIVIELLWFLKGDTNVKYLQDNKVTIWDEWATAEQTARFG 60 Query: 89 ----ELGPIYGVQWRSWP-------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 ELGP+YG QWR++ Y+ + DQI ++ ++ +P SRR IVS WN Sbjct: 61 RPEHELGPVYGHQWRNFGATKNADGTYNQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNE 120 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 ++ALPPCH LFQF+V + KLSCQLYQRS DVFLG+PFNIASY+LLT M+A V G G Sbjct: 121 AGQVALPPCHTLFQFFVQDNKLSCQLYQRSADVFLGVPFNIASYALLTHMIAQVCGLDVG 180 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 +F+ T GD HLY NHFEQA LQL+R P L Q+ +NP++ D+ F++ED + YE H A Sbjct: 181 DFVWTGGDTHLYANHFEQAKLQLTREPLPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPA 240 Query: 258 ILAKVSV 264 I A V+V Sbjct: 241 IKAPVAV 247 >gi|6729892|pdb|1BP6|A Chain A, Thymidylate Synthase R23i, R179t Double Mutant Length = 316 Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G + D T GT S FG+QMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKKVLDEGHFKPDITHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ +L +H IWDEWA Sbjct: 66 HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSR IVSAW Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRTLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L +Y+ Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305 Query: 254 PHAAILAKVSV 264 P+ AI A V+V Sbjct: 306 PYPAIKAPVAV 316 >gi|259500709|ref|ZP_05743611.1| thymidylate synthase [Lactobacillus iners DSM 13335] gi|259168093|gb|EEW52588.1| thymidylate synthase [Lactobacillus iners DSM 13335] Length = 329 Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 185/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V + + ELLWFL Sbjct: 19 YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLWFL 78 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 79 RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMNIF 138 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W G+ IDQ+ ++++ ++ +P SRR IVSAW Sbjct: 139 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVSAW 198 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A G Sbjct: 199 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 258 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NHF+Q + QLSR+ P + +NP +L F +D L Y Sbjct: 259 LELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLIDYN 318 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 319 HHGTIKAPVAV 329 >gi|291394174|ref|XP_002713484.1| PREDICTED: thymidylate synthase [Oryctolagus cuniculus] Length = 310 Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 134/282 (47%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 29 QYLGQIEHILRCGFRKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 88 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD A +D G+LGP+YG QWR + Sbjct: 89 IKGSTNAKELSSKGVKIWDANASRDFLDSLGFSTRQEGDLGPVYGFQWRHFGAEYKDKDS 148 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 149 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 208 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E QL R Sbjct: 209 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHIYLNHIEPLKTQLQR 268 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF L Y PH I +++V Sbjct: 269 EPRPFPKLKILRKVETIDDFKAEDFQLEGYNPHPTIKMEMAV 310 >gi|163740938|ref|ZP_02148331.1| thymidylate synthase [Phaeobacter gallaeciensis 2.10] gi|161385929|gb|EDQ10305.1| thymidylate synthase [Phaeobacter gallaeciensis 2.10] Length = 246 Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 129/245 (52%), Positives = 174/245 (71%), Gaps = 13/245 (5%) Query: 33 QMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGP 92 Q R+ L+ GFPL+TTKK+H +S++HELLWFL GD+N+ YL +GVSIWDEWAD++G+LGP Sbjct: 2 QTRYPLADGFPLVTTKKLHLRSIIHELLWFLSGDTNIGYLKDNGVSIWDEWADENGDLGP 61 Query: 93 IYGVQWRSWPD-------------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 +YG QWR +P Y +DQI+++V+ +R P SRR IV+AWN A + Sbjct: 62 VYGHQWRHFPRLELAPGTSGDEPLYRAGTVDQITNLVEMIRNSPDSRRLIVTAWNPADVP 121 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 MALPPCH L+Q V ++ QLYQRS D+FLG+PFNIASY+LL MLA V G++ G+F Sbjct: 122 DMALPPCHTLWQVRVQGRRMHLQLYQRSADMFLGVPFNIASYALLLKMLAHVTGYEAGDF 181 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 IHT+GD H+Y+NH +Q LQLSR P+ LP++ IN ++ + FRYEDF + +Y P I Sbjct: 182 IHTIGDAHIYSNHMDQVKLQLSRRPQPLPELRINRDVSSIFEFRYEDFDVLNYTPDPGIK 241 Query: 260 AKVSV 264 A V+V Sbjct: 242 APVAV 246 >gi|163839708|ref|YP_001624113.1| thymidylate synthase [Renibacterium salmoninarum ATCC 33209] gi|162953184|gb|ABY22699.1| thymidylate synthase [Renibacterium salmoninarum ATCC 33209] Length = 208 Score = 278 bits (710), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 126/207 (60%), Positives = 159/207 (76%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 ELLWFLRGDSNV +L +GV IW+EWAD DGELGP+YGVQWRSWP DG IDQI+S+++ Sbjct: 2 ELLWFLRGDSNVHWLQENGVKIWNEWADDDGELGPVYGVQWRSWPTPDGQHIDQIASLIE 61 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 +L+A+P SRRHIVSAWNVA + KMALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFN Sbjct: 62 ALKANPDSRRHIVSAWNVAELSKMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFN 121 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 IASY+LL +M+A +G + GEFI T GD H+Y++H Q + QLSR P P + IN Sbjct: 122 IASYALLALMVAQQVGLEPGEFIWTGGDTHIYDDHLAQVEEQLSREPFPYPSLRINRKPT 181 Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + +EDF + +Y+ HA I A ++V Sbjct: 182 SIFDYNFEDFEVLNYQHHATIKAPIAV 208 >gi|302848723|ref|XP_002955893.1| hypothetical protein VOLCADRAFT_66296 [Volvox carteri f. nagariensis] gi|300258861|gb|EFJ43094.1| hypothetical protein VOLCADRAFT_66296 [Volvox carteri f. nagariensis] Length = 483 Score = 278 bits (710), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 135/282 (47%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L+R +I G+ R DRTG GT S FG R++L FPLLT+K+V WK V ELLWF Sbjct: 202 QYLELVRELITSGTFRPDRTGTGTYSRFGRTARYNLRHTFPLLTSKRVFWKGVAEELLWF 261 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 +RG +N + L + IWD + ++ G+LGP+YG QWR + Sbjct: 262 IRGSTNANLLRDKNIHIWDGNSTREYLDSRGLHHREVGDLGPVYGFQWRHFGAAYKDMHT 321 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ +I++ +R DP RR I+SAWN A +++MALPPCH QFYV +G+LSC Sbjct: 322 DYTGQGVDQLKAIIEQIRKDPNDRRMIMSAWNPAALNEMALPPCHMFCQFYVADGELSCL 381 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS DV LG+PFNIASY+LLT ++A V G + G+FIH +GD H+Y NH E QL Sbjct: 382 MYQRSCDVGLGVPFNIASYALLTRLVAQVTGLRAGDFIHVMGDTHVYANHVEPLKEQLKN 441 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P + INP D+ SF +EDF L Y+PH I K++V Sbjct: 442 TPRHFPILNINPAKTDIDSFVFEDFELVDYQPHQTIKMKMAV 483 >gi|148705312|gb|EDL37259.1| thymidylate synthase, isoform CRA_a [Mus musculus] Length = 318 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 37 QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 96 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 97 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 156 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 157 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 216 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 217 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 276 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 277 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 318 >gi|227890206|ref|ZP_04008011.1| thymidylate synthase [Lactobacillus johnsonii ATCC 33200] gi|227849208|gb|EEJ59294.1| thymidylate synthase [Lactobacillus johnsonii ATCC 33200] Length = 318 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 180/311 (57%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ + + ELLWFL Sbjct: 8 YLDLLSKIMNEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L H IWDEWA Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVESSEYQGPDMTNFGLRSQEDPEFKRIYQEEMQKF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G LG +YG QWR W +G IDQI +++ ++ PYSRR IVSAW Sbjct: 128 DQKVLEDQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL +++ G Sbjct: 188 NPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLISRETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y NHF Q L+RS P + +NP+ + F +D L +Y Sbjct: 248 LKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLINYR 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|18044897|gb|AAH20139.1| Tyms protein [Mus musculus] Length = 307 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 26 QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 86 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 266 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307 >gi|46358062|ref|NP_067263.1| thymidylate synthase [Mus musculus] gi|136614|sp|P07607|TYSY_MOUSE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|285803264|pdb|3IHH|A Chain A, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803265|pdb|3IHH|B Chain B, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803266|pdb|3IHH|C Chain C, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803267|pdb|3IHH|D Chain D, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803268|pdb|3IHH|E Chain E, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803269|pdb|3IHH|F Chain F, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803270|pdb|3IHI|A Chain A, Crystal Structure Of Mouse Thymidylate Synthase gi|285803271|pdb|3IHI|B Chain B, Crystal Structure Of Mouse Thymidylate Synthase gi|202030|gb|AAA40439.1| thymidylate synthase (EC 2.1.1.45) [Mus musculus] gi|202050|gb|AAA40444.1| thymidylate synthase [Mus musculus] gi|26330828|dbj|BAC29144.1| unnamed protein product [Mus musculus] gi|148705313|gb|EDL37260.1| thymidylate synthase, isoform CRA_b [Mus musculus] Length = 307 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 26 QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 86 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 266 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307 >gi|9507217|ref|NP_062052.1| thymidylate synthase [Rattus norvegicus] gi|1174841|sp|P45352|TYSY_RAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|4558189|pdb|1RTS|A Chain A, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|4558190|pdb|1RTS|B Chain B, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|4558226|pdb|2TSR|A Chain A, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|4558227|pdb|2TSR|B Chain B, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|4558228|pdb|2TSR|C Chain C, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|4558229|pdb|2TSR|D Chain D, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|207328|gb|AAA92340.1| thymidylate synthase [Rattus norvegicus] gi|117558487|gb|AAI26094.1| Thymidylate synthetase [Rattus norvegicus] gi|149036310|gb|EDL90969.1| thymidylate synthase [Rattus norvegicus] gi|1095492|prf||2109225A thymidylate synthase Length = 307 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 26 QYLRQVEHIMRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 86 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGADYKDMDS 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 266 EPRPFPKLRILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307 >gi|194758475|ref|XP_001961487.1| GF14907 [Drosophila ananassae] gi|190615184|gb|EDV30708.1| GF14907 [Drosophila ananassae] Length = 340 Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 139/284 (48%), Positives = 181/284 (63%), Gaps = 22/284 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LLR +I G R DRT VGT S FG QMRF L FPLLTTK+V +++V ELLWF Sbjct: 57 QYLNLLRSIINTGERRMDRTEVGTLSIFGSQMRFSLRGCFPLLTTKRVFFRAVAEELLWF 116 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------P 102 + G ++ L V IWD E+ DK G+LGP+YG QWR + Sbjct: 117 VAGKTDAKLLQAKNVHIWDGNSTREFLDKLGHTDRAVGDLGPVYGFQWRHFGAEYTTCDD 176 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGKLS 160 DY G IDQ+ ++ +++ +P RR I+SAWN I KMALPPCHCL QFYV + G+LS Sbjct: 177 DYRGKGIDQLKHVIDTIKKNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQERGELS 236 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E QL Sbjct: 237 CQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLQEQL 296 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P+++I + D+ FRYEDF + Y P+ I +++ Sbjct: 297 EREPRPFPKLVIKRQVQDIEDFRYEDFEIVDYNPYPKIKMDMAI 340 >gi|195454454|ref|XP_002074244.1| GK18389 [Drosophila willistoni] gi|194170329|gb|EDW85230.1| GK18389 [Drosophila willistoni] Length = 340 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 133/285 (46%), Positives = 183/285 (64%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDLLR +I+ G R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V ELLW Sbjct: 56 EQYLDLLRSIIERGETRIDRTRVGTLSIFGSQMRFDMRESFPLLTTKRVFFRAVAEELLW 115 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F++G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 116 FIKGKTDAKILQDKNVHIWDGNSTREFLDNLGFTDRAVGDLGPVYGFQWRHFGAEYRTCQ 175 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159 DY G +DQ+ ++++++ +P RR I+SAWN I KMALPPCHCL QFYV G+L Sbjct: 176 DDYTGQGVDQLRQVIETIKTNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQSRGEL 235 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y +H E Q Sbjct: 236 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLSHVEPIKEQ 295 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R+PR P++ + D+ F YED + +Y P+ I +++V Sbjct: 296 LKRTPRPFPKLAFKRQVTDIEDFTYEDIEVVNYNPYPKIQMEMAV 340 >gi|195031079|ref|XP_001988286.1| GH10649 [Drosophila grimshawi] gi|193904286|gb|EDW03153.1| GH10649 [Drosophila grimshawi] Length = 329 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 138/285 (48%), Positives = 180/285 (63%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDLL+ +IK G R DRT VGT S FG QMRFDL FPLLTTK+V ++ V ELLW Sbjct: 45 QQYLDLLKRIIKTGDQRIDRTAVGTLSIFGTQMRFDLRDSFPLLTTKRVFFRGVAEELLW 104 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ G +N L V IWD E+ DK +G+LGP+YG QWR + Sbjct: 105 FVAGKTNAKLLQAKKVHIWDFNSTREFLDKCGHTDRDEGDLGPVYGFQWRHFGAEYRGCD 164 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159 DY G +DQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QF+V G+L Sbjct: 165 DDYTGQGVDQLQQVIDTIRNNPADRRIIMSAWNPLDIPKMALPPCHCLVQFFVSQSRGEL 224 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQ+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E Q Sbjct: 225 SCQMYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLQEQ 284 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R PR P++ I + + F Y+DF + Y P+ I K++V Sbjct: 285 MKRVPRPFPKLRIKRQVEKIEDFCYDDFEVVDYNPYEKIQMKMAV 329 >gi|221110571|ref|XP_002155565.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 329 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 139/283 (49%), Positives = 184/283 (65%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +I+ G + DRTG GT S FG QMRF+L + FPLLTTK+V WK VV ELLW Sbjct: 47 YQYLNLVKRIIETGYSKADRTGTGTLSIFGGQMRFNLRESFPLLTTKRVFWKGVVEELLW 106 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADKD-------GELGPIYGVQWRSW-------- 101 F+ G ++ + L + GV IW+ E+ DK G+LGPIYG QWR + Sbjct: 107 FISGSTDGNILAQKGVQIWNSNGTREFLDKCNLHHREVGDLGPIYGFQWRHFGAKYVDKH 166 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G IDQ++ I+ +++ +P RR I+SAWN I MALPPCH QFYV NG+LSC Sbjct: 167 ADYTGQGIDQLAQIIHTIKTNPDDRRMIMSAWNPVDIPLMALPPCHSFCQFYVANGELSC 226 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LGIPFNIASYSLLT ++A V + G+FIHTLGD H+YNNH Q+ Sbjct: 227 QMYQRSCDMGLGIPFNIASYSLLTYIIAHVCNLKPGDFIHTLGDAHVYNNHVSALKEQIG 286 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 RSPR P++ I + ++ F+ +DF L Y PH I ++V Sbjct: 287 RSPRPFPKLNIKRKVENIDDFKSDDFELIGYNPHQKIKMAMAV 329 >gi|42519343|ref|NP_965273.1| thymidylate synthase [Lactobacillus johnsonii NCC 533] gi|62901341|sp|Q74IU3|TYSY_LACJO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|41583631|gb|AAS09239.1| thymidylate synthase [Lactobacillus johnsonii NCC 533] Length = 318 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 179/311 (57%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ + + ELLWFL Sbjct: 8 YLDLLSKIMSEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L H IWDEWA Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVESNEYQGPDMTNFGLRSQQDPEFKRIYQEEMKKF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G LG +YG QWR W +G IDQI +++ ++ PYSRR IVSAW Sbjct: 128 DQKVLEDQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV++G LS QLYQRSGD+FLG+PFNIASY+LL ++A G Sbjct: 188 NPEDVPTSALPPCHVLFQFYVNDGCLSLQLYQRSGDMFLGVPFNIASYALLVNLVARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y NHF Q L+RS P + +NP+ + F +D L +Y Sbjct: 248 LKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLINYR 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|208969084|dbj|BAG74311.1| dihydrofolate reductase-thymidylate synthase [Babesia gibsoni] Length = 515 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 134/282 (47%), Positives = 183/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+L V+ G+ +++RTG S FGYQMRFDLSK FPLLTTKKV +S++ ELLWF Sbjct: 229 QYLDILADVLSNGTLKQNRTGTDAYSKFGYQMRFDLSKSFPLLTTKKVALRSIIEELLWF 288 Query: 63 LRGDSNVSYLHRHGVSIWD-----------EWADKDG-ELGPIYGVQWRSW--------P 102 +RG +N + L V IW+ + D++ +LGP+YG QWR + Sbjct: 289 IRGSTNGNDLLAKNVRIWELNGARSFLDNLGFTDREEHDLGPVYGFQWRHFGAKYLDMHA 348 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G IDQ+ ++++ ++ +P RR IV +WNVA + KMALPPCHC FQFYV +GKLSC Sbjct: 349 DYSGQGIDQLKTVIEKIKTNPNDRRLIVCSWNVADLGKMALPPCHCFFQFYVKDGKLSCL 408 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYS+LT M+A V G Q GEF+H L D H+Y +H E LQ+SR Sbjct: 409 MHQRSCDLGLGVPFNIASYSILTAMIAQVCGLQLGEFVHNLADAHVYVDHVEPVKLQMSR 468 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P PQ+ +NP++ D+ F +D + +Y H I +S Sbjct: 469 VPYPFPQLKLNPDVKDIEGFTIDDIQVVNYVSHPPIKMAMSA 510 >gi|268319281|ref|YP_003292937.1| hypothetical protein FI9785_796 [Lactobacillus johnsonii FI9785] gi|262397656|emb|CAX66670.1| thyA [Lactobacillus johnsonii FI9785] Length = 318 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 179/311 (57%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL ++ G D+ DRTG GTRS FG QMRFDL+ GFP+LTTK++ + + ELLWFL Sbjct: 8 YLDLLSKIMNEGHDKEDRTGTGTRSLFGVQMRFDLNDGFPILTTKEIPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L H IWDEWA Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVESSDYQGPDMTNFGLRSQEDPEFKKIYQEEMKKF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G LG +YG QWR W G IDQI +++ ++ PYSRR IVSAW Sbjct: 128 DEKVLADQTFAEKYGNLGDVYGAQWRHWQKRGGGFIDQIQNVIDQIKTTPYSRRLIVSAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL ++A G Sbjct: 188 NPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLIACETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y NHF Q L+RS P + +NP+ + F +D L +Y Sbjct: 248 LKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLINYR 307 Query: 254 PHAAILAKVSV 264 H I A V+V Sbjct: 308 HHGTIKAPVAV 318 >gi|16117371|gb|AAL14421.1|AF188480_3 thymidylate synthase [Macropodid herpesvirus 1] Length = 316 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 137/282 (48%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + +++ G + DRTG GT S FG Q R++L FPLLTTK+V+WK VV ELLWF Sbjct: 35 QYLYQVARILREGYRKGDRTGTGTLSVFGTQARYNLRGEFPLLTTKRVYWKGVVEELLWF 94 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SWP 102 +RG +N L GV IWD +D G+LGP+YG QWR S Sbjct: 95 VRGATNTKELSSRGVKIWDAHGSRDFLDKRGFPSREEGDLGPVYGFQWRHFGAEYRGSEA 154 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G DQ+ ++ +L+ +P RR ++ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 155 DYSGQGADQLQYVIDTLKRNPDDRRIVMCAWNPKDLPLMALPPCHTLCQFYVANGELSCQ 214 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V+G GE +HTLGD H+Y NH E+ +QL R Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHVVGLVPGELVHTLGDAHIYLNHIERLRIQLQR 274 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR PQ+ I + + FR EDF L Y PH+A+ +++V Sbjct: 275 EPRPFPQLKIIRAVTSIDYFRSEDFVLEGYRPHSALKMELAV 316 >gi|222617018|gb|EEE53150.1| hypothetical protein OsJ_35972 [Oryza sativa Japonica Group] Length = 521 Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L + FPLLTTK+V W+ V+ ELLW Sbjct: 239 YQYLNLVQDIIRNGAKKNDRTGTGTVSKFGCQMRFNLRRNFPLLTTKRVFWRGVLEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101 F+ G +N L G+ IWD A + +G+LGP+YG QWR + Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASRQYLDSIGLTQREEGDLGPVYGFQWRHFGAEYTDMH 358 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + KMALPPCH QFYV+NG+LSC Sbjct: 359 ADYVGKGFDQLMDVIDKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G+F+H +GD H+Y H E + Q+ Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGDFVHVIGDAHVYRTHVEALEEQMR 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP D+ SF DF L Y+PH I K++V Sbjct: 479 KQPKPFPILKINPVKKDIDSFVTSDFKLVRYDPHHKIEMKMAV 521 >gi|163737393|ref|ZP_02144810.1| Thymidylate synthase [Phaeobacter gallaeciensis BS107] gi|161388919|gb|EDQ13271.1| Thymidylate synthase [Phaeobacter gallaeciensis BS107] Length = 246 Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 128/245 (52%), Positives = 172/245 (70%), Gaps = 13/245 (5%) Query: 33 QMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGP 92 Q R+ L+ GFPL+TTKK+H +S++HELLWFL GD+N+ YL +GVSIWDEWAD++G+LGP Sbjct: 2 QTRYPLADGFPLVTTKKLHLRSIIHELLWFLSGDTNIGYLKDNGVSIWDEWADENGDLGP 61 Query: 93 IYGVQWRSWPD-------------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 +YG QWR +P Y +DQI+++V +R P SRR IV+AWN + Sbjct: 62 VYGHQWRHFPRLELAEGTTGEEPLYRAGTVDQIANLVDMIRNSPDSRRLIVTAWNPGDVP 121 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 MALPPCH L+Q V ++ QLYQRS D+FLG+PFNIASY+LL MLA V G++ G+F Sbjct: 122 DMALPPCHTLWQVRVQGRRMHLQLYQRSADMFLGVPFNIASYALLLKMLAHVTGYEAGDF 181 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 IHT+GD H+Y+NH +Q LQLSR P+ LP++ IN ++ + FRYEDF + +Y P I Sbjct: 182 IHTIGDAHIYSNHMDQVKLQLSRRPQPLPELRINRDVSSIFEFRYEDFDVLNYTPDPGIK 241 Query: 260 AKVSV 264 A V+V Sbjct: 242 APVAV 246 >gi|307108201|gb|EFN56442.1| hypothetical protein CHLNCDRAFT_30873 [Chlorella variabilis] Length = 508 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 134/283 (47%), Positives = 180/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL+++ V+ G R DRTG GT S FG MRF+L FPLLTTK+V W+ V ELLW Sbjct: 226 HQYLEMIEDVMANGVFRGDRTGTGTYSKFGATMRFNLRHSFPLLTTKRVFWRGVAEELLW 285 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101 F+ G +N L G+ IWD E+ D G +LGP+YG QWR + Sbjct: 286 FVSGCTNARVLMDKGIHIWDGNGSREYLDSIGLSHREEMDLGPVYGFQWRHFGAEYTDMH 345 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ +P RR ++SAWN A + MALPPCH QFYV +G+LSC Sbjct: 346 ADYGGKGVDQLAELIHKIKTNPNDRRLVLSAWNPAALTDMALPPCHMFCQFYVADGELSC 405 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H LGD H+Y NH QL Sbjct: 406 QMYQRSCDLGLGVPFNIASYSLLTCMVAQVCGLRPGDFVHVLGDAHVYANHVGPLRDQLK 465 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P+++INP D+ SF ++DF L Y+PH AI +++V Sbjct: 466 NAPRHFPRLLINPAKTDIDSFVFDDFQLEGYQPHKAIKMQMAV 508 >gi|66556831|ref|XP_624369.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase [Apis mellifera] Length = 305 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 140/284 (49%), Positives = 179/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+L+ +IK G+ + DRTGVGT S FG QMRF+L FPLLTTK+V WK VV ELL Sbjct: 22 YQYLNLIEKIIKDGTRKDDRTGVGTLSIFGTQMRFNLRNNIFPLLTTKRVFWKGVVEELL 81 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRS-------- 100 WF++G +N L V IWD E+ D ++G+LGPIYG QWR Sbjct: 82 WFIKGSTNAKKLSEKDVHIWDANSSREFLDSCGFIDREEGDLGPIYGFQWRHFGATYKDM 141 Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 + DY+G IDQ+ ++ +R P RR I++AWN I KMALPPCHC QFYV N +LS Sbjct: 142 YKDYNGEGIDQLKEVIDKIRYSPNDRRIIMTAWNPIDIPKMALPPCHCFVQFYVSNEELS 201 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASYSLL +LA + + GEFIHT+GD H+Y NH Q+ Sbjct: 202 CQLYQRSADMGLGVPFNIASYSLLIYILAHITNLKPGEFIHTMGDCHVYLNHISALKEQI 261 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + I N+ D+ F DF L Y+PHA I ++V Sbjct: 262 KRVPKPFPYLKIIRNVEDINDFTANDFELIGYDPHAKISMPMAV 305 >gi|295798079|emb|CAX68899.1| Thymidylate synthase [uncultured bacterium] Length = 271 Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 133/262 (50%), Positives = 173/262 (66%), Gaps = 11/262 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G + DRTG GT S FGYQ ++DL +GFP+LTTKKV + +VV ELL Sbjct: 1 MKQYLDLVRDILTHGEKKEDRTGTGTISLFGYQSKYDLRQGFPILTTKKVLFDAVVWELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD---------YDGNVIDQ 111 WFLRG +N++ + IW+ WAD GELGP+YG QWR W Y IDQ Sbjct: 61 WFLRGSTNINDDLKAHTPIWNAWADAQGELGPVYGYQWRKWEKFVWDEKARAYQKKHIDQ 120 Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 I+ ++++++ +P SRR IVSAWNV+ ID+MALPPCH FQFYV NG+L CQLYQRS DV Sbjct: 121 ITEVIETIKKNPNSRRLIVSAWNVSDIDRMALPPCHAFFQFYVVNGRLDCQLYQRSADVA 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LL ++A G F HTLGD H+Y NH + QL R+P+ P + Sbjct: 181 LGVPFNIASYALLMSLVAKECSLTPGIFTHTLGDAHIYLNHIDGIKQQLERAPK--PLAL 238 Query: 232 INPNIVDLLSFRYEDFTLRSYE 253 + +L R+ED L Y+ Sbjct: 239 LQLACKRVLECRFEDIKLIGYQ 260 >gi|241106587|ref|XP_002410061.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] gi|215492873|gb|EEC02514.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] Length = 301 Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 137/284 (48%), Positives = 182/284 (64%), Gaps = 25/284 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLD L H++K G + DRTG GT S FG Q R+ L+ G PLLTTK+V W+ VV ELL Sbjct: 22 YQYLDTLAHILKNGRQKGDRTGTGTISIFGAQCRYSLADGTMPLLTTKRVFWRGVVEELL 81 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG +N L GV IWD + +G+LGP+YG QWR + Sbjct: 82 WFLRGSTNAKELSERGVRIWDGNGSRQFLDSLGFVDREEGDLGPVYGFQWRHFGAPYRTM 141 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY +DQI +++++++ +P RR I+ +WN A + KMALPPCHCL QFYV +LS Sbjct: 142 RTDYGDEGVDQIKNLIETIKTNPNDRRMILCSWNPADLGKMALPPCHCLAQFYVYEDELS 201 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH + L Sbjct: 202 CQLYQRSADMGLGVPFNIASYALLTHMVAKVTGKRPGDFVHTLGDAHIYLNHVD----AL 257 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I ++ D+ FR+EDF + Y PH AI ++SV Sbjct: 258 EREPRPFPKLHIKRDVKDIFDFRFEDFEIVDYHPHPAIKMEMSV 301 >gi|322788931|gb|EFZ14449.1| hypothetical protein SINV_05432 [Solenopsis invicta] Length = 302 Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 139/284 (48%), Positives = 180/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+ VIK G+ R +RTGV T S FG QMRF L G FPLLTTK+V W++VV ELL Sbjct: 19 YQYLRLIEKVIKTGAKRGNRTGVDTYSIFGAQMRFSLRDGVFPLLTTKRVFWRAVVEELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WF++G +N L G+ IWDE + +G+LGP+YG QWR + Sbjct: 79 WFIKGSTNSKELTDKGIHIWDENGSRAFLDSYGFTNREEGDLGPVYGFQWRHFGAEYKDM 138 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY IDQ+ ++ ++ P RR I+SAWN I KMALPPCH QFYV+NG+LS Sbjct: 139 HTDYTRQGIDQLKEVIHKVKHSPEDRRIIMSAWNPVDIPKMALPPCHTFVQFYVNNGELS 198 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH + Q+ Sbjct: 199 AQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEEQV 258 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I I D+ F EDF L Y+P+A + K++V Sbjct: 259 KREPREFPKLKIVREIKDIDDFIAEDFELIDYKPYAKLYMKMAV 302 >gi|325183269|emb|CCA17727.1| bifunctional dihydrofolate reductasethymidylate synthase 2 putative [Albugo laibachii Nc14] gi|325183915|emb|CCA18373.1| bifunctional dihydrofolate reductasethymidylate synthase 2 putative [Albugo laibachii Nc14] Length = 494 Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 135/286 (47%), Positives = 185/286 (64%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+L+R+++ G +++DRTGVGT+S FG QMRF+L FPLLTTKKV W+ V ELL Sbjct: 209 YQYLNLIRNIVANGVEKQDRTGVGTKSIFGVQMRFNLRNDMFPLLTTKKVFWRGVAEELL 268 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW------- 101 WF+ G++N L V IWD ++G+LGPIYG QWR + Sbjct: 269 WFISGNTNAKTLQDRKVRIWDGNGSSAYLKSIGLHHREEGDLGPIYGFQWRHFGAKYTDM 328 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G DQ++ ++ L+ DP RR I+SAWN +++MALPPCH + QFYV G+LS Sbjct: 329 HADYTGQGFDQLADVILKLKTDPNGRRIILSAWNPNDLNEMALPPCHLMCQFYVAKGQLS 388 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFNIASY+LLT M+A V GEF+H +GD H+Y NH E LQL Sbjct: 389 CQMYQRSADMGLGVPFNIASYALLTKMIAHVTYLTPGEFVHVIGDAHIYLNHLEPLKLQL 448 Query: 221 SRSPRTLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P ++I P ++ + F + DF L++YEP+ AI ++V Sbjct: 449 ERTPRPFPTLLIRPRNDLRTIDDFEFTDFELQNYEPYMAIKMAMAV 494 >gi|195161930|ref|XP_002021809.1| GL26706 [Drosophila persimilis] gi|194103609|gb|EDW25652.1| GL26706 [Drosophila persimilis] Length = 330 Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 139/285 (48%), Positives = 183/285 (64%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL++++I G R DRT VGT S FG Q+RFD+ FPLLTTK+V +++VV EL+W Sbjct: 46 QQYLDLIQYIIGNGERRIDRTNVGTLSVFGSQLRFDMRLSFPLLTTKRVFFRAVVEELIW 105 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ G ++ L V IWD E+ DK G+LGP+YG QWR + Sbjct: 106 FVGGKTDAKLLQAKNVHIWDGNSTREYLDKLGHTDRAVGDLGPVYGFQWRHFGAEYGTCD 165 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159 DY G IDQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QFYV G+L Sbjct: 166 DDYSGKGIDQLRQVIDTIRHNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGEL 225 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+FIHT+GD H+Y NH + Q Sbjct: 226 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKTGDFIHTMGDAHVYLNHVDPLKEQ 285 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R PR P++ I + ++ FRYEDF + YEP+ I ++V Sbjct: 286 LKRKPRPFPKLNIKRQVENIEDFRYEDFEIIGYEPYPKIKMDMAV 330 >gi|110808211|sp|Q2QRX6|DRTS_ORYSJ RecName: Full=Putative bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|108862630|gb|ABA98037.2| Bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed [Oryza sativa Japonica Group] gi|215769248|dbj|BAH01477.1| unnamed protein product [Oryza sativa Japonica Group] gi|218186783|gb|EEC69210.1| hypothetical protein OsI_38205 [Oryza sativa Indica Group] Length = 494 Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L + FPLLTTK+V W+ V+ ELLW Sbjct: 212 YQYLNLVQDIIRNGAKKNDRTGTGTVSKFGCQMRFNLRRNFPLLTTKRVFWRGVLEELLW 271 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101 F+ G +N L G+ IWD A + +G+LGP+YG QWR + Sbjct: 272 FISGSTNAKVLQEKGIHIWDGNASRQYLDSIGLTQREEGDLGPVYGFQWRHFGAEYTDMH 331 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + KMALPPCH QFYV+NG+LSC Sbjct: 332 ADYVGKGFDQLMDVIDKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 391 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G+F+H +GD H+Y H E + Q+ Sbjct: 392 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGDFVHVIGDAHVYRTHVEALEEQMR 451 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP D+ SF DF L Y+PH I K++V Sbjct: 452 KQPKPFPILKINPVKKDIDSFVTSDFKLVRYDPHHKIEMKMAV 494 >gi|296222340|ref|XP_002757144.1| PREDICTED: thymidylate synthase-like isoform 1 [Callithrix jacchus] Length = 313 Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYRDMDS 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNGELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFKVEGYNPHPTIKMEMAV 313 >gi|156551994|ref|XP_001603103.1| PREDICTED: similar to Tyms protein [Nasonia vitripennis] Length = 316 Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 133/277 (48%), Positives = 175/277 (63%), Gaps = 21/277 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYL L+R ++ G+ + DRTGVGT S FG QMRF L G PLLTTK+V W++V EL W Sbjct: 34 QYLKLIRLILDKGAVKDDRTGVGTHSVFGTQMRFSLRDGTLPLLTTKRVFWRAVAEELFW 93 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG +N L GV IWD A ++ G+LGP+YG QWR + Sbjct: 94 FIRGSTNAKELSAKGVKIWDANASREFLDTCGFQDREEGDLGPVYGFQWRHFGAKYVDMH 153 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ++ ++ ++ +P RR I+SAWN I KMALPPCH L QFYV +G+LSC Sbjct: 154 TDYSGQGFDQLADVIDKVKNNPDDRRIIMSAWNPVDIPKMALPPCHSLAQFYVYDGELSC 213 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQR+GD+ LG+PFNIASYSLLT+M+A V + GEF+HT+GD H+Y NH + Q+ Sbjct: 214 HLYQRAGDMGLGVPFNIASYSLLTIMIAHVANLKPGEFVHTMGDTHVYRNHVDAVKEQIK 273 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R PR P++ I + D+ F++ DF L Y PH I Sbjct: 274 REPRPFPKLRIKRQVTDIDDFQFSDFELEGYNPHPKI 310 >gi|118349035|ref|XP_001033394.1| bifunctional dihydrofolate reductase-thymidylate synthase [Tetrahymena thermophila] gi|89287743|gb|EAR85731.1| bifunctional dihydrofolate reductase-thymidylate synthase [Tetrahymena thermophila SB210] Length = 485 Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 138/285 (48%), Positives = 182/285 (63%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L+ +IK G + DRTG GT S FG MRFDLSK FPLLTTK V W+ VV EL+W Sbjct: 201 YQYLELIDEIIKNGHVKTDRTGTGTISQFGKLMRFDLSKSFPLLTTKNVFWRGVVEELIW 260 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F++G +N L GV IWD E+ D+ +G+LGP+YG QWR + Sbjct: 261 FIKGSTNSKILSEKGVKIWDGNGSREFLDQLGFKNREEGDLGPVYGFQWRHFGAEYKDMH 320 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y G +DQ+ ++ +++ +P SRR I++AWNV + MALPPCH + QFYV++ KLSC Sbjct: 321 TNYKGKGVDQLQDLINTIKKNPDSRRMIMNAWNVKDLPLMALPPCHVMSQFYVNDNKLSC 380 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LGIPFNIASY+LLT M+A V Q GEFIH LGD H+Y+NH +Q +QL Sbjct: 381 MMYQRSCDMGLGIPFNIASYALLTHMIAQVTNMQVGEFIHVLGDAHVYSNHVDQLKIQLE 440 Query: 222 RSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+P P + IN N + F EDF L Y H I K++V Sbjct: 441 RAPYPFPLLKINNNKQYNSIEDFTLEDFELIGYNYHPKIQMKMAV 485 >gi|118403890|ref|NP_001072852.1| thymidylate synthase [Xenopus (Silurana) tropicalis] gi|114107689|gb|AAI22925.1| thymidylate synthetase [Xenopus (Silurana) tropicalis] Length = 308 Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 133/282 (47%), Positives = 185/282 (65%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 27 QYLDQIKHILERGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 86 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWR--------SWP 102 ++G +N L GV IWD E+ DK +G+LGP+YG QWR ++ Sbjct: 87 IKGCTNSKELSAKGVKIWDANGSREFLDKQGFSNREEGDLGPVYGFQWRHFGAEYKDTYT 146 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ +++++++ +P RR I+ +WN I MALPPCH L QFYV + +LSCQ Sbjct: 147 DYSGQGVDQLRNVIETIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVIDKELSCQ 206 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E LQL R Sbjct: 207 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHTEPLKLQLQR 266 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + ++ F +DF + Y PH +I +++V Sbjct: 267 TPRPFPKLKILRKVENIDDFTADDFLIEGYNPHPSIKMEMAV 308 >gi|301609223|ref|XP_002934168.1| PREDICTED: thymidylate synthase-like [Xenopus (Silurana) tropicalis] Length = 308 Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 133/282 (47%), Positives = 185/282 (65%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 27 QYLDQIKHILEHGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 86 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWR--------SWP 102 ++G +N L GV IWD E+ DK +G+LGP+YG QWR ++ Sbjct: 87 IKGCTNSKELSAKGVKIWDANGSREFLDKQGFSNREEGDLGPVYGFQWRHFGAEYKDTYT 146 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ +++++++ +P RR I+ +WN I MALPPCH L QFYV + +LSCQ Sbjct: 147 DYSGQGVDQLRNVIETIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVIDKELSCQ 206 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E LQL R Sbjct: 207 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHTEPLKLQLQR 266 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + ++ F +DF + Y PH +I +++V Sbjct: 267 TPRPFPKLKILRKVENIDDFTADDFLIEGYNPHPSIKMEMAV 308 >gi|15988336|pdb|1JU6|A Chain A, Human Thymidylate Synthase Complex With Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988337|pdb|1JU6|B Chain B, Human Thymidylate Synthase Complex With Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988338|pdb|1JU6|C Chain C, Human Thymidylate Synthase Complex With Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988339|pdb|1JU6|D Chain D, Human Thymidylate Synthase Complex With Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988342|pdb|1JUJ|A Chain A, Human Thymidylate Synthase Bound To Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988343|pdb|1JUJ|B Chain B, Human Thymidylate Synthase Bound To Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988344|pdb|1JUJ|C Chain C, Human Thymidylate Synthase Bound To Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988345|pdb|1JUJ|D Chain D, Human Thymidylate Synthase Bound To Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate Length = 313 Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G ++ DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVEKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|323448689|gb|EGB04584.1| hypothetical protein AURANDRAFT_38942 [Aureococcus anophagefferens] Length = 510 Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 132/284 (46%), Positives = 181/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL+ ++ G R DRTG GT S FG +M F L FPLLTTK+V W+ V EL+ Sbjct: 227 KQYLDLIAEILDRGVRRGDRTGTGTISIFGARMSFSLRNDRFPLLTTKRVFWRGVAEELV 286 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WF+ G +N L G+ IWD E+ D+ G +LGP+YG QWR + Sbjct: 287 WFVSGSTNGKLLADKGIHIWDGNGSREFLDRRGLGHREEMDLGPVYGFQWRHFGAKYVDM 346 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+++ V++++ DP SRR ++SAWN A +D+MALPPCH QFYV NG+LS Sbjct: 347 HKDYAGEGVDQLAACVETIKQDPNSRRIVLSAWNPADLDEMALPPCHMFCQFYVANGELS 406 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFNIASY+LLT M+A G + G+F+H +GD H+Y+NH + +QL Sbjct: 407 CQMYQRSADMGLGVPFNIASYALLTRMVAQATGLKPGDFVHVIGDAHVYSNHVDALKVQL 466 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + INP + F + DFT+ Y+P+ I K++V Sbjct: 467 QREPRPFPTLTINPAKTGIDDFEFADFTVEGYKPYPKIDMKMAV 510 >gi|12847560|dbj|BAB27620.1| unnamed protein product [Mus musculus] Length = 307 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 26 QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 86 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR ++ I + + F+ EDF + Y PH I +++V Sbjct: 266 EPRPFQKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307 >gi|149721010|ref|XP_001492275.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Equus caballus] Length = 312 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R++L FPLLTTK+V WK V+ ELLWF Sbjct: 31 QYLGQIEHILRSGFRKEDRTGTGTLSVFGLQARYNLRDEFPLLTTKRVFWKGVLEELLWF 90 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N + L GV IWD +D G+LGP+YG QWR + Sbjct: 91 IKGSTNANELSCKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYKDMDS 150 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 151 DYSGQGVDQLQKVINTIKTNPDDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 210 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH + QL R Sbjct: 211 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIDPLKTQLQR 270 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF L Y PH I +++V Sbjct: 271 EPRPFPKLKILRKVETIDDFKAEDFQLEGYHPHPTIRMEMAV 312 >gi|125984772|ref|XP_001356150.1| GA16493 [Drosophila pseudoobscura pseudoobscura] gi|54644469|gb|EAL33210.1| GA16493 [Drosophila pseudoobscura pseudoobscura] Length = 330 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 138/285 (48%), Positives = 182/285 (63%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLD ++++I G R DRT VGT S FG Q+RFD+ FPLLTTK+V +++VV EL+W Sbjct: 46 QQYLDFIQYIIGNGERRIDRTNVGTLSVFGSQLRFDMRLSFPLLTTKRVFFRAVVEELIW 105 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ G ++ L V IWD E+ DK G+LGP+YG QWR + Sbjct: 106 FVGGKTDAKLLQAKNVHIWDGNSTREYLDKLGHTDRAVGDLGPVYGFQWRHFGAEYGTCD 165 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159 DY G IDQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QFYV G+L Sbjct: 166 DDYSGKGIDQLRQVIDTIRHNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGEL 225 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+FIHT+GD H+Y NH + Q Sbjct: 226 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKTGDFIHTMGDAHVYLNHVDPLKEQ 285 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R PR P++ I + ++ FRYEDF + YEP+ I ++V Sbjct: 286 LKRKPRPFPKLNIKRQVENIEDFRYEDFEIIGYEPYPKIKMDMAV 330 >gi|114672489|ref|XP_001150437.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] gi|114672491|ref|XP_001150499.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] gi|114672493|ref|XP_001150558.1| PREDICTED: thymidylate synthase isoform 5 [Pan troglodytes] Length = 313 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++++P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKSNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|331073|gb|AAA46174.1| thymidylate synthase [Saimiriine herpesvirus 2] Length = 294 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 134/283 (47%), Positives = 180/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL ++H++ +GS + DRTG GT S FG Q RF L FPLLTTK+V W+ VV ELLW Sbjct: 12 HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDE-----------WADKD-GELGPIYGVQWRSWP------- 102 F+RG ++ L GV IWD + D+D G+LGP+YG QWR + Sbjct: 72 FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYKGVG 131 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ +++ +P RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC Sbjct: 132 RDYKGEGVDQLKQLIDTIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT M+A V GEFIHT+GD H+Y +H + +QL+ Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVLGEFIHTIGDAHIYVDHIDALKMQLT 251 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + N+ + F+ +D L +Y PH I ++V Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294 >gi|13096425|pdb|1HW4|A Chain A, Structure Of Thymidylate Synthase Suggests Advantages Of Chemotherapy With Noncompetitive Inhibitors Length = 355 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 74 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 133 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 134 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 193 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 194 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPCHALXQFYVVNSELSCQ 253 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 254 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 313 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 314 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 355 >gi|189095969|pdb|2RD8|A Chain A, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016200|pdb|2RDA|A Chain A, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016201|pdb|2RDA|B Chain B, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016202|pdb|2RDA|C Chain C, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016203|pdb|2RDA|D Chain D, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016204|pdb|2RDA|E Chain E, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016205|pdb|2RDA|F Chain F, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|295982231|pdb|3H9K|A Chain A, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|295982232|pdb|3H9K|B Chain B, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|295982233|pdb|3H9K|C Chain C, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|295982234|pdb|3H9K|D Chain D, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|295982235|pdb|3H9K|E Chain E, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|296863446|pdb|3HB8|A Chain A, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|296863447|pdb|3HB8|B Chain B, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|296863448|pdb|3HB8|C Chain C, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|296863449|pdb|3HB8|D Chain D, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|296863450|pdb|3HB8|E Chain E, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|315364512|pdb|3OB7|A Chain A, Human Thymidylate Synthase R163k With Cys 195 Covalently Modified By Glutathione gi|315364513|pdb|3OB7|B Chain B, Human Thymidylate Synthase R163k With Cys 195 Covalently Modified By Glutathione gi|315364514|pdb|3OB7|C Chain C, Human Thymidylate Synthase R163k With Cys 195 Covalently Modified By Glutathione gi|315364515|pdb|3OB7|D Chain D, Human Thymidylate Synthase R163k With Cys 195 Covalently Modified By Glutathione gi|315364516|pdb|3OB7|E Chain E, Human Thymidylate Synthase R163k With Cys 195 Covalently Modified By Glutathione Length = 313 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|290560083|pdb|3EAW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALXQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|30348576|emb|CAC84368.1| thymidylate synthase [Saimiriine herpesvirus 2] Length = 294 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 135/283 (47%), Positives = 180/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL ++H++ +GS + DRTG GT S FG Q RF L FPLLTTK+V W+ VV ELLW Sbjct: 12 HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDE-----------WADKD-GELGPIYGVQWR--------SW 101 F+RG ++ L GV IWD + D+D G+LGP+YG QWR S Sbjct: 72 FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYRGSK 131 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ +++ +P RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC Sbjct: 132 RDYKGEGVDQLKQLIATIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT M+A V GEFIHT+GD H+Y +H + +QL+ Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVPGEFIHTIGDAHIYVDHIDALKMQLT 251 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + N+ + F+ +D L +Y PH I ++V Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294 >gi|169822911|gb|ACA96515.1| thymidylate synthase [Expression vector pYB100] Length = 325 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 44 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 103 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 104 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 163 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 164 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 223 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 224 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 283 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 284 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 325 >gi|290560115|pdb|3GG5|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560116|pdb|3GG5|B Chain B, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560117|pdb|3GG5|C Chain C, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560118|pdb|3GG5|D Chain D, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|290560086|pdb|3EDW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560094|pdb|3EJL|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560095|pdb|3EJL|B Chain B, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560096|pdb|3EJL|C Chain C, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560097|pdb|3EJL|D Chain D, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|4507751|ref|NP_001062.1| thymidylate synthase [Homo sapiens] gi|136611|sp|P04818|TYSY_HUMAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|37479|emb|CAA26178.1| unnamed protein product [Homo sapiens] gi|220136|dbj|BAA00472.1| thymidylate synthase [Homo sapiens] gi|12803483|gb|AAH02567.1| Thymidylate synthetase [Homo sapiens] gi|15530267|gb|AAH13919.1| Thymidylate synthetase [Homo sapiens] gi|21104406|dbj|BAB93473.1| thymidylate synthetase [Homo sapiens] gi|30582461|gb|AAP35457.1| thymidylate synthetase [Homo sapiens] gi|53733365|gb|AAH83512.1| TYMS protein [Homo sapiens] gi|60655085|gb|AAX32106.1| thymidylate synthetase [synthetic construct] gi|60814259|gb|AAX36293.1| thymidylate synthetase [synthetic construct] gi|61355304|gb|AAX41125.1| thymidylate synthetase [synthetic construct] gi|119622126|gb|EAX01721.1| thymidylate synthetase, isoform CRA_f [Homo sapiens] gi|123982668|gb|ABM83075.1| thymidylate synthetase [synthetic construct] gi|189054310|dbj|BAG36830.1| unnamed protein product [Homo sapiens] gi|307685173|dbj|BAJ20517.1| thymidylate synthetase [synthetic construct] Length = 313 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|195398227|ref|XP_002057724.1| GJ18288 [Drosophila virilis] gi|194141378|gb|EDW57797.1| GJ18288 [Drosophila virilis] Length = 348 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 135/284 (47%), Positives = 178/284 (62%), Gaps = 22/284 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + +IK G R DRT VGT S FG QMRFDL K FPLLTTK+V ++ V ELLWF Sbjct: 65 QYLLFIERIIKNGDKRVDRTRVGTLSIFGAQMRFDLRKSFPLLTTKRVFFRGVAEELLWF 124 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 + G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 125 IAGKTDAKILQAKKVHIWDANSTREFLDNCGHTDRAVGDLGPVYGFQWRHFGAEYRTCDD 184 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKLS 160 DY G +DQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QF+V G+LS Sbjct: 185 DYTGQGVDQLQQVIHTIRTNPSDRRIIMSAWNPMDIPKMALPPCHCLVQFFVSQSKGELS 244 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT ++A V G + GEFIHT+GD H+Y NH E Q+ Sbjct: 245 CQLYQRSADMGLGVPFNIASYALLTYLIAHVTGLKPGEFIHTIGDAHVYLNHIEPLQQQI 304 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 RSP+ P++ I + ++ F YEDF + Y P AI +++V Sbjct: 305 KRSPKPFPKLNIKRQVTNIEDFCYEDFEIVGYNPDKAIPMEMAV 348 >gi|7330001|gb|AAF59990.1|AF210726_11 thymidylate synthetase [Rhesus monkey rhadinovirus H26-95] Length = 333 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL L +IK G R DRTGVGTRS FG Q R++L FPLLTTK+V W+ VV ELLWF Sbjct: 52 QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------P 102 +RG ++ + L R GV IWD + +G+LGP+YG QWR + Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y+G +DQ+ +V + P+ RR ++ AWN A + +MALPPCH L QFYV G+LSCQ Sbjct: 172 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRS D+ LG+PFNIASY+LLT ++A V G G+F+HTLGD H+YNNH + LQL R Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 291 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + L F D +L Y+PH I +++V Sbjct: 292 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 333 >gi|290560120|pdb|3GH2|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|297702332|ref|XP_002828137.1| PREDICTED: thymidylate synthase-like isoform 1 [Pongo abelii] gi|297702334|ref|XP_002828138.1| PREDICTED: thymidylate synthase-like isoform 2 [Pongo abelii] Length = 313 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|9626026|ref|NP_040272.1| thymidylate synthase [Saimiriine herpesvirus 2] gi|136610|sp|P06854|TYSY_SHV21 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|66442|pir||SYBEHS thymidylate synthase (EC 2.1.1.45) - saimiriine herpesvirus 1 gi|60391|emb|CAA45693.1| thymidylate synthase [Saimiriine herpesvirus 2] gi|330999|gb|AAA46146.1| thymidylate synthase [Saimiriine herpesvirus 2] gi|331075|gb|AAA46175.1| dTMP synthase [Saimiriine herpesvirus 2] Length = 294 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 134/283 (47%), Positives = 180/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL ++H++ +GS + DRTG GT S FG Q RF L FPLLTTK+V W+ VV ELLW Sbjct: 12 HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDE-----------WADKD-GELGPIYGVQWRSWP------- 102 F+RG ++ L GV IWD + D+D G+LGP+YG QWR + Sbjct: 72 FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYKGVG 131 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ +++ +P RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC Sbjct: 132 RDYKGEGVDQLKQLIDTIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT M+A V GEFIHT+GD H+Y +H + +QL+ Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVPGEFIHTIGDAHIYVDHIDALKMQLT 251 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + N+ + F+ +D L +Y PH I ++V Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294 >gi|290560090|pdb|3EF9|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560119|pdb|3GH0|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|30584493|gb|AAP36499.1| Homo sapiens thymidylate synthetase [synthetic construct] gi|60826011|gb|AAX36743.1| thymidylate synthetase [synthetic construct] gi|61365335|gb|AAX42692.1| thymidylate synthetase [synthetic construct] gi|61371785|gb|AAX43730.1| thymidylate synthetase [synthetic construct] gi|61371791|gb|AAX43731.1| thymidylate synthetase [synthetic construct] Length = 314 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|242006823|ref|XP_002424244.1| Thymidylate synthase, putative [Pediculus humanus corporis] gi|212507613|gb|EEB11506.1| Thymidylate synthase, putative [Pediculus humanus corporis] Length = 316 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/283 (46%), Positives = 188/283 (66%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QY++ +++++K G + +DRTGVGT S FG QM++ L FPLLTTK+V WK +V ELLW Sbjct: 34 YQYINHIKNIMKNGVEMKDRTGVGTLSIFGAQMKWSLKDVFPLLTTKRVFWKGIVEELLW 93 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 FLRG +N L GVSIWD E+ D ++G+LGP+YG QWR + Sbjct: 94 FLRGSTNALELKEKGVSIWDANSSREFLDSLGFYDREEGDLGPVYGFQWRHFGAKYKTMH 153 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY IDQ+ +I+ +++ PY RR I+SAWN I MALPPCHCL QF+V NG+L+ Sbjct: 154 DDYTNQGIDQLQNIIDTIKKRPYDRRMIMSAWNPVDIPIMALPPCHCLVQFHVANGELNS 213 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V + G F+H++GD H+Y NH + ++Q+ Sbjct: 214 QMYQRSADMGLGVPFNIASYSLLTYMVAHVTNLKPGVFVHSMGDSHIYLNHLKPLEVQIQ 273 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++ I + ++ F+++DF L Y P+ I +++V Sbjct: 274 RTPRPFPKLSIVRQVSNINDFKFDDFKLEGYNPYPKIQMEMAV 316 >gi|77550896|gb|ABA93693.1| Bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed [Oryza sativa Japonica Group] Length = 521 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL+L+ +I+ G+ + DRTG GT S FG QMRF+L FPLLTTKKV W+ VV ELLW Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+ G ++ L G+ IWD E+ D ++G+LGP+YG QWR + Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + + KMALPPCH QFYV++G+LSC Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVESGELSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G GEF+H +GD H+Y H + Q+ Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAHVCGLSPGEFVHVIGDAHVYRTHVRALEEQIQ 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP D+ SF DF L Y+PH I K+++ Sbjct: 479 KLPKPFPVLKINPLKKDIDSFVASDFKLVGYDPHQKIEMKMAI 521 >gi|18653820|ref|NP_570754.1| thymidylate synthase [Macacine herpesvirus 5] gi|5823015|gb|AAD53009.1|AF087411_2 thymidylate synthase [Macacine herpesvirus 5] gi|4494918|gb|AAD21340.1| thymidylate synthase [Macaca mulatta rhadinovirus 17577] Length = 333 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL L +IK G R DRTGVGTRS FG Q R++L FPLLTTK+V W+ VV ELLWF Sbjct: 52 QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------P 102 +RG ++ + L R GV IWD + +G+LGP+YG QWR + Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y+G +DQ+ +V + P+ RR ++ AWN A + +MALPPCH L QFYV G+LSCQ Sbjct: 172 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRS D+ LG+PFNIASY+LLT ++A V G G+F+HTLGD H+YNNH + LQL R Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 291 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + L F D +L Y+PH I +++V Sbjct: 292 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 333 >gi|14277914|pdb|1HZW|A Chain A, Crystal Structure Of Human Thymidylate Synthase gi|14277915|pdb|1HZW|B Chain B, Crystal Structure Of Human Thymidylate Synthase gi|14277916|pdb|1I00|A Chain A, Crystal Structure Of Human Thymidylate Synthase, Ternary Complex With Dump And Tomudex gi|14277917|pdb|1I00|B Chain B, Crystal Structure Of Human Thymidylate Synthase, Ternary Complex With Dump And Tomudex Length = 290 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 9 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 68 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 69 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 128 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 129 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 188 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 189 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 248 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 249 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 290 >gi|306774132|ref|NP_001182436.1| thymidylate synthase [Macaca mulatta] Length = 313 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRGEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|13096294|pdb|1HVY|A Chain A, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation gi|13096295|pdb|1HVY|B Chain B, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation gi|13096296|pdb|1HVY|C Chain C, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation gi|13096297|pdb|1HVY|D Chain D, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation Length = 288 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 7 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 66 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 67 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 126 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 127 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 186 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 187 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 246 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 247 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 288 >gi|290560085|pdb|3ED7|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 295 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 14 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 74 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 133 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 134 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 193 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 194 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 253 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 254 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 295 >gi|18859519|ref|NP_571835.1| thymidylate synthase [Danio rerio] gi|9795378|gb|AAF97476.1| thymidylate synthase [Danio rerio] Length = 319 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 129/281 (45%), Positives = 178/281 (63%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +++ G+ + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 39 YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98 Query: 64 RGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PD 103 +G +N L GV IWD E+ DK +G+LGP+YG QWR + D Sbjct: 99 KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 158 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ +++++P RR I+ AWN + MALPPCH L QFYV NG+LSCQL Sbjct: 159 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 218 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E Q+ R Sbjct: 219 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 278 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F EDF + Y+PH I +++V Sbjct: 279 PRPFPKLRIKRKVEQINDFCAEDFEIYDYDPHPTIKMQMAV 319 >gi|29124532|gb|AAH49026.1| Tyms protein [Danio rerio] Length = 319 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 129/281 (45%), Positives = 178/281 (63%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +++ G+ + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 39 YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98 Query: 64 RGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PD 103 +G +N L GV IWD E+ DK +G+LGP+YG QWR + D Sbjct: 99 KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 158 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ +++++P RR I+ AWN + MALPPCH L QFYV NG+LSCQL Sbjct: 159 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 218 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E Q+ R Sbjct: 219 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 278 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F EDF + Y+PH I +++V Sbjct: 279 PRPFPKLRIKRKVEQINDFCAEDFEIYDYDPHPTIKMQMAV 319 >gi|312963676|ref|ZP_07778157.1| Thymidylate synthase [Pseudomonas fluorescens WH6] gi|311282185|gb|EFQ60785.1| Thymidylate synthase [Pseudomonas fluorescens WH6] Length = 277 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 128/277 (46%), Positives = 179/277 (64%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GT++ F Q R +L+ GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKQYLELLNDVVTNGLTKGDRTGTGTKAVFARQYRHNLADGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L G++N+ +L+ +GV IWDEWA +DG+LGP+YG QW +WP DG I+QI +V +L+ Sbjct: 61 WMLSGNTNIKWLNENGVRIWDEWATEDGDLGPVYGEQWTAWPTKDGGTINQIDYMVHTLK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + K ALPPCH L+Q +V +G LS QLY RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDETKSPQENARNGKQALPPCHLLYQAFVHDGHLSMQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+P+N A+ +LLT MLA E I T GD H Y+NH EQ QL+R+P+ L Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVTTGDTHAYSNHMEQIRTQLARTPKKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+++I + +++EDF + YE +I A V++ Sbjct: 241 PELVIKRKPESIYDYKFEDFEIVGYEADPSIKADVAI 277 >gi|2625048|gb|AAC58691.1| thymidylate synthase homolog [rhesus monkey rhadinovirus H26-95] Length = 282 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL L +IK G R DRTGVGTRS FG Q R++L FPLLTTK+V W+ VV ELLWF Sbjct: 1 QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 60 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------P 102 +RG ++ + L R GV IWD + +G+LGP+YG QWR + Sbjct: 61 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 120 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y+G +DQ+ +V + P+ RR ++ AWN A + +MALPPCH L QFYV G+LSCQ Sbjct: 121 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 180 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRS D+ LG+PFNIASY+LLT ++A V G G+F+HTLGD H+YNNH + LQL R Sbjct: 181 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 240 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + L F D +L Y+PH I +++V Sbjct: 241 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 282 >gi|229593185|ref|YP_002875304.1| thymidylate synthase [Pseudomonas fluorescens SBW25] gi|259550806|sp|C3K3Q8|TYSY_PSEFS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|229365051|emb|CAY53232.1| thymidylate synthase [Pseudomonas fluorescens SBW25] Length = 277 Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 127/277 (45%), Positives = 179/277 (64%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GT++ F Q R +L+ GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKQYLELLNDVVTNGLTKGDRTGTGTKAVFARQYRHNLADGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L G++N+ +L+ +GV IWDEWA +DG+LGP+YG QW +WP DG I+QI +V +L+ Sbjct: 61 WMLSGNTNIKWLNENGVKIWDEWATEDGDLGPVYGEQWTAWPTKDGGTINQIDYMVHTLK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + K ALPPCH L+Q +V +G LS QLY RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDETKSPQENARNGKQALPPCHLLYQAFVHDGHLSMQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+P+N A+ +LLT MLA E I T GD H Y+NH EQ QL+R+P+ L Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVTTGDTHAYSNHMEQIRTQLARTPKKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+++I + +++EDF + Y+ +I A V++ Sbjct: 241 PELVIKRKPASIYDYKFEDFEIVGYDADPSIKADVAI 277 >gi|41351139|gb|AAH65845.1| Tyms protein [Danio rerio] Length = 318 Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 129/281 (45%), Positives = 177/281 (62%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +++ G+ + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 38 YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 97 Query: 64 RGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PD 103 +G +N L GV IWD E+ DK +G+LGP+YG QWR + D Sbjct: 98 KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 157 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ +++++P RR I+ AWN + MALPPCH L QFYV NG+LSCQL Sbjct: 158 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 217 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E Q+ R Sbjct: 218 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 277 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F EDF + Y PH I +++V Sbjct: 278 PRPFPKLRIKRKVEQINDFCAEDFEIYDYNPHPTIKMQMAV 318 >gi|331017946|gb|EGH98002.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 277 Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 132/277 (47%), Positives = 179/277 (64%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LLR VI+ GS++ DRTG GT + FG Q R +L+ GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKQYLELLRDVIENGSEKGDRTGTGTTAVFGRQFRHNLADGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L G +N +L+ +GV+IWDEWA +DG+LGP+YG QW WP DG I+QI +V L+ Sbjct: 61 WMLSGSTNTKWLNENGVTIWDEWATEDGDLGPVYGAQWTGWPTKDGGKINQIDYMVDCLK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WN + K AL CH L+Q +V +GKLS QLY RS Sbjct: 121 NNPNSRRILFHGWNTEYLPDEKLSPQENVKNGKQALAVCHLLYQAFVADGKLSMQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+P+N A+ +LLT MLA E I +LGD H Y NH +Q + QL R+P+ L Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVSLGDAHAYANHRDQINTQLLRAPKKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+IIN + +++EDF + YE +I A V++ Sbjct: 241 PQLIINRRPSSIYDYKFEDFEVVGYEADPSIRAPVAI 277 >gi|240848723|ref|NP_001155666.1| thymidylate synthase-like [Acyrthosiphon pisum] gi|239790855|dbj|BAH71962.1| ACYPI006453 [Acyrthosiphon pisum] Length = 299 Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 131/284 (46%), Positives = 180/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLD ++ +++ G + DRT VGT S FG QMR++L G FPLLTTK+V W+ VV ELL Sbjct: 16 QQYLDHIKKILEKGHKKMDRTRVGTLSLFGIQMRYNLMDGVFPLLTTKRVFWRGVVEELL 75 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WF++G +N L V +WD + + +G+LGP+YG QWR + Sbjct: 76 WFIKGSTNSKELSEKDVKVWDANSTRSYLDSIGLTDREEGDLGPVYGFQWRHYGAEYVDV 135 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+ +++ +++ +P RR ++ AWN + KMALPPCHCL QF+V +G LS Sbjct: 136 HTDYSGKGIDQLQNVINTIKTNPDDRRMLMIAWNPCDVPKMALPPCHCLVQFFVADGYLS 195 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH + +QL Sbjct: 196 CQMYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHIYLNHVDALKIQL 255 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + IN + + F + DFTL Y P+ I ++V Sbjct: 256 QRKPKQFPTLTINREVKSIDDFNFSDFTLSGYVPYPKISMDMAV 299 >gi|62898305|dbj|BAD97092.1| thymidylate synthetase variant [Homo sapiens] Length = 313 Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PF+IASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFDIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|114053279|ref|NP_001040281.1| thymidylate synthase isoform 1 [Bombyx mori] gi|87248619|gb|ABD36362.1| thymidylate synthase isoform 1 [Bombyx mori] Length = 298 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 134/284 (47%), Positives = 176/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60 +QYL L+ +IK G R DRTGVGT S FG R+ L + PLLTTK+V + V+ ELL Sbjct: 15 YQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIEELL 74 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR--------S 100 W + G ++ L GV IWD + +G+LGP+YG QWR Sbjct: 75 WMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKYIDC 134 Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+ S++ S++ +P RR ++ AWN + + KMALPPCHCL QFYV +GKLS Sbjct: 135 QTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFYVADGKLS 194 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASYSLLT M+A V G+Q GEFIHT GD H+Y NH E +QL Sbjct: 195 CLLYQRSADMGLGVPFNIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPLKIQL 254 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + I + F+YEDF ++ Y+PH I +++V Sbjct: 255 QREPKQFPTLEFARKIESIDDFKYEDFIIKDYKPHPKIEMEMAV 298 >gi|330983977|gb|EGH82080.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 277 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 135/277 (48%), Positives = 178/277 (64%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL VI G + DRTG GT++ FG Q R +L+ GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKAYLDLLTDVITNGVVKGDRTGTGTKAVFGRQFRHNLADGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L G++NV++L +GVSIW+EWA +DG LGP+YG QW +WP DG I+QI ++ L+ Sbjct: 61 WMLSGNTNVNWLKENGVSIWNEWATEDGYLGPLYGEQWTAWPTKDGGTINQIDYVINMLK 120 Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + KMALPPCH L+QFYV + KLS LY RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDESMSPQENARNGKMALPPCHLLYQFYVADNKLSSHLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ LG P+N+AS SLLT MLA E I T GD H Y NH +Q QLSR+PR L Sbjct: 181 SDLLLGNPYNLASVSLLTHMLAQQCDLIPHEVIITTGDTHAYLNHMDQIHEQLSRTPRKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I + +R+EDF + Y+P+ +I A V+V Sbjct: 241 PELKILRKPDSIYDYRFEDFEIVGYDPYPSIKAPVAV 277 >gi|256032572|pdb|3EHI|X Chain X, Crystal Structure Of Human Thymidyalte Synthase M190k With Loop 181-197 Stabilized In The Inactive Conformation Length = 313 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + ALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLKALPPCHALXQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|299469759|emb|CBN76613.1| conserved unknown protein [Ectocarpus siliculosus] Length = 581 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 130/283 (45%), Positives = 179/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61 QYL+L+ ++ G R DRTG GT S FG QMRF L + FPLLTTK+V W+ V ELLW Sbjct: 299 QYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLW 358 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+ G +N + L G+ IWD E+ D ++G+LGP+YG QWR + Sbjct: 359 FVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMH 418 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ +Q ++ +P RR ++SAWN A + KMALPPCH QFYV G+LSC Sbjct: 419 ADYTGKGVDQLAECIQKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSC 478 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT ++A G + G+F+HT+GD H+Y NH + QL Sbjct: 479 QMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGDFVHTIGDAHVYVNHVDALREQLK 538 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + IN + D+ SF Y+ ++ Y P+ I K++V Sbjct: 539 RKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 581 >gi|46519351|gb|AAS99999.1| JM22 [Macaca fuscata rhadinovirus] Length = 333 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 135/282 (47%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL L +I+ G R DRTGVGTRS FG Q R++L FPLLTTK+V W+ VV ELLWF Sbjct: 52 QYLAHLDLIIRHGVQRDDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------P 102 +RG ++ + L R GV IWD + +G+LGP+YG QWR + Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY+G +DQ+ +V + P+ RR ++ AWN A + +MALPPCH L QFYV G+LSCQ Sbjct: 172 DYEGQGVDQLRYVVDLIVRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRS D+ LG+PFNIASY+LLT ++A V G G+F+HTLGD H+YNNH LQL R Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVGPLLLQLGR 291 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + L F D +L Y+PH I +++V Sbjct: 292 TPRPFPRLKILRKVTRLEDFTRADLSLEGYDPHPHIEMEMAV 333 >gi|189236060|ref|XP_970584.2| PREDICTED: similar to bifunctional dihydrofolate reductase-thymidylate synthase [Tribolium castaneum] Length = 303 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 137/284 (48%), Positives = 180/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL ++ +I G + DRTGVGT S FG QMR+ L FPLLTTK+V W+ VV ELL Sbjct: 20 YQYLSHIKLIIDKGVKKSDRTGVGTFSIFGAQMRYSLRDNVFPLLTTKRVFWRGVVEELL 79 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSWP------ 102 WF++G +N + L V IWD E+ D ++G+LGP+YG QWR + Sbjct: 80 WFIKGSTNANELKEKNVHIWDANSTREFLDSVGLNEREEGDLGPVYGFQWRHFGAEYKGM 139 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY IDQ++ +++++R P RR I+ AWN I +MALPPCHCL QF+V NG+LS Sbjct: 140 HWDYANQGIDQLAHVIETIRNKPNDRRIIMCAWNPVDIPEMALPPCHCLVQFFVANGELS 199 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E QL Sbjct: 200 CLLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHVYLNHVEPLQEQL 259 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + I + + F ++DF L YEPH + ++V Sbjct: 260 KRTPRPFPTLKIKRQVSSIEDFVFDDFELSGYEPHPKLSMPMAV 303 >gi|9631261|ref|NP_048042.1| thymidylate synthase [Ateline herpesvirus 3] gi|4019297|gb|AAC95595.1| thymidylate synthase [Ateline herpesvirus 3] Length = 290 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 135/283 (47%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL ++H++ G+ + DRTGVGT S FG Q R+ L K FPLLTTK+V W+ VV ELLW Sbjct: 8 HQYLSQVKHILNCGNFKHDRTGVGTLSVFGMQSRYSLEKDFPLLTTKRVFWRGVVEELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSWP------- 102 F+RG ++ L GV IWD + DK +G+LGP+YG QWR + Sbjct: 68 FIRGSTDSKELAASGVHIWDANGSRSYLDKLGFCDREEGDLGPVYGFQWRHFGAEYQGLK 127 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y G +DQ+ I+ ++ +P RR ++ AWNV + KMALPPCH L QFYV +GKLSC Sbjct: 128 HNYGGEGVDQLKQIINTIHTNPTDRRMLMCAWNVLDVPKMALPPCHVLSQFYVCDGKLSC 187 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT M+A V GEFIHTLGD H+Y NH + QL+ Sbjct: 188 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTDLVPGEFIHTLGDAHIYVNHIDALTEQLT 247 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + I + F+ D L +Y P+ +I ++V Sbjct: 248 RTPRPFPTLKFARKIASIDDFKANDIILENYNPYPSIKMPMAV 290 >gi|295692816|ref|YP_003601426.1| thymidylate synthase [Lactobacillus crispatus ST1] gi|295030922|emb|CBL50401.1| Thymidylate synthase [Lactobacillus crispatus ST1] Length = 303 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 137/300 (45%), Positives = 174/300 (58%), Gaps = 50/300 (16%) Query: 15 GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74 G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV + + ELLWFLRGD+N+ +L Sbjct: 4 GHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLWFLRGDTNIRFLLE 63 Query: 75 HGVSIWDEWADKD----------------------------------------------- 87 H IWDEWA K+ Sbjct: 64 HNNHIWDEWAFKNWIESAEYQGPDMTNFGLRSQSDPEFNQVYQAEMRKFNQRILDDPAFA 123 Query: 88 ---GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144 G LG +YG QWR W G IDQI+ +++ ++ P SRR IV+AWN + ALP Sbjct: 124 QKYGNLGDVYGAQWRHWEKRTGGFIDQIADVIKQIKETPDSRRMIVTAWNPEDVPTSALP 183 Query: 145 PCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204 PCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL M+A G + GEF+HTLG Sbjct: 184 PCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARETGLKVGEFVHTLG 243 Query: 205 DVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 D H+Y NHF Q LSR+P P++ +NP + F +D + +Y+ H I A V+V Sbjct: 244 DAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLNYQHHGTIKAPVAV 303 >gi|270005647|gb|EFA02095.1| hypothetical protein TcasGA2_TC007732 [Tribolium castaneum] Length = 330 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 137/284 (48%), Positives = 180/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL ++ +I G + DRTGVGT S FG QMR+ L FPLLTTK+V W+ VV ELL Sbjct: 47 YQYLSHIKLIIDKGVKKSDRTGVGTFSIFGAQMRYSLRDNVFPLLTTKRVFWRGVVEELL 106 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSWP------ 102 WF++G +N + L V IWD E+ D ++G+LGP+YG QWR + Sbjct: 107 WFIKGSTNANELKEKNVHIWDANSTREFLDSVGLNEREEGDLGPVYGFQWRHFGAEYKGM 166 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY IDQ++ +++++R P RR I+ AWN I +MALPPCHCL QF+V NG+LS Sbjct: 167 HWDYANQGIDQLAHVIETIRNKPNDRRIIMCAWNPVDIPEMALPPCHCLVQFFVANGELS 226 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E QL Sbjct: 227 CLLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHVYLNHVEPLQEQL 286 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + I + + F ++DF L YEPH + ++V Sbjct: 287 KRTPRPFPTLKIKRQVSSIEDFVFDDFELSGYEPHPKLSMPMAV 330 >gi|320163301|gb|EFW40200.1| thymidylate synthase [Capsaspora owczarzaki ATCC 30864] Length = 337 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 131/284 (46%), Positives = 179/284 (63%), Gaps = 22/284 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL+R +I+ G +R DRTG GTRS FG QMRF L G PLLTTK+V W+ V ELLW Sbjct: 54 QYLDLIRAIIENGDERLDRTGTGTRSIFGAQMRFSLRDGVMPLLTTKRVFWRGVAEELLW 113 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101 F+ G++N + L + IWD + +G+LGP+YG QWR + Sbjct: 114 FVAGNTNATALSDKDIHIWDANGSRAFLDGRGLQHREEGDLGPVYGFQWRHFGAPYTTMH 173 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LS 160 DY+G +DQ+ ++++++ +P RR I+SAWN I MALPPCH + QF+V + K LS Sbjct: 174 ADYEGKGVDQLKHVIETIKTNPNDRRLIISAWNPVDIPNMALPPCHMMCQFHVSSKKELS 233 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C +YQRS D+ LG+PFNIASY+LLT+M+A V G GE +HT+GD H+Y NH + QL Sbjct: 234 CLMYQRSADMGLGVPFNIASYALLTIMVAEVTGLTPGELVHTIGDAHVYLNHIDPLKEQL 293 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P +N + ++ FR+EDF + Y PHA I ++V Sbjct: 294 KREPRPFPTFKLNRKVTEIDDFRFEDFVITGYNPHAKIEMDMAV 337 >gi|170051025|ref|XP_001861577.1| thymidylate synthase [Culex quinquefasciatus] gi|167872454|gb|EDS35837.1| thymidylate synthase [Culex quinquefasciatus] Length = 310 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 133/283 (46%), Positives = 183/283 (64%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R +I G+ R DRTGVGT S FG QMR++L + PLLTTK+V ++ V ELLW Sbjct: 28 QYLELTRRIIAKGNKRLDRTGVGTLSIFGSQMRYNLRNNTLPLLTTKRVFFRGVAEELLW 87 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+RG +N L + + IWD E+ D ++G+LGP+YG QWR + Sbjct: 88 FIRGRTNAKDLQQKNIHIWDGNSTREFLDSAGFTDREEGDLGPVYGFQWRHFGAKYKTCD 147 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G IDQ++ ++ ++ +P RR I+SAWN I +MALPPCHCL QF+V +G+LSC Sbjct: 148 DDYTGEGIDQLAEVINRIKTNPTDRRIIMSAWNPVDIPQMALPPCHCLAQFFVSDGELSC 207 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASY+LLT M+A V G Q G+F+HT GD H+Y NH E QL Sbjct: 208 QLYQRSADMGLGVPFNIASYALLTHMIAHVTGLQPGDFVHTTGDTHVYLNHVEPLQAQLM 267 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + + + F++EDF +R Y+P+ I +++V Sbjct: 268 RKPKPFPTLHFKRVVQSIDDFQFEDFDVRGYDPYPTIKMQMAV 310 >gi|219111327|ref|XP_002177415.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411950|gb|EEC51878.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 495 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 132/283 (46%), Positives = 178/283 (62%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL RH++ G R DRTG GT S FG QMRF L G PLLTTK+V W+ V ELLW Sbjct: 213 QYLDLCRHILDHGVRRGDRTGTGTLSQFGTQMRFSLRDGTLPLLTTKRVFWRGVAEELLW 272 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+ G++N + L + IWD +D G+LGP+YG QWR + Sbjct: 273 FVAGNTNANDLAAKDIRIWDGNGSRDFLDSRGLGHREVGDLGPVYGFQWRHFGATYGTMH 332 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ + ++ +P RR I+SAWN A ++ MALPPCH QFYV LSC Sbjct: 333 DDYTGKGVDQLAECIDKIKNNPEDRRIILSAWNPADLELMALPPCHMFCQFYVRTASLSC 392 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH + QL Sbjct: 393 QMYQRSADMGLGVPFNIASYALLTHMIAHVTGRKPGDFVHTIGDAHVYLNHVDALQTQLE 452 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++ INP+ ++ F + DFT+ Y+PH I +++V Sbjct: 453 RTPRAFPKLQINPDKQNIDDFVFADFTVVGYQPHKTIKMEMAV 495 >gi|300120673|emb|CBK20227.2| Thymidylate synthase [Blastocystis hominis] Length = 495 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYL+L+R+++ G+ R DRT GTRS FG QMRF L+ G PLLTTKKV W+ +V ELLW Sbjct: 203 QYLNLIRYILDHGALRTDRTNTGTRSVFGTQMRFLLANGVIPLLTTKKVFWRGIVEELLW 262 Query: 62 FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSW-------- 101 F+RG ++ L + IWD +++ +LGPIYG QWR + Sbjct: 263 FIRGCTDGRVLKEKNIHIWDGNGTRSFLDSVGLTQNEEDDLGPIYGFQWRHFGAAYEGRD 322 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY +DQ+ ++ L+ DPY+RR I+SAWN A + KMALPPCH + QFYV NG LSC Sbjct: 323 KDYSNQGVDQLKEVIHLLKTDPYNRRIILSAWNPADLRKMALPPCHVMSQFYVQNGYLSC 382 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT++LA + G + GEF+H++GD H+Y NH E Q+ Sbjct: 383 QMYQRSADMGLGVPFNIASYSLLTILLAHITGLKPGEFVHSIGDTHVYVNHEEALLQQIE 442 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I ++ + + DF L Y PH + K+++ Sbjct: 443 REPRPFPTLRITKQSENIEEYTFADFELVGYNPHETLKMKMAI 485 >gi|158258677|dbj|BAF85309.1| unnamed protein product [Homo sapiens] Length = 313 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRS D+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSRDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|157073887|ref|NP_001096659.1| thymidylate synthase [Xenopus laevis] gi|120538084|gb|AAI29728.1| Ts protein [Xenopus laevis] Length = 309 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 132/282 (46%), Positives = 182/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD ++++++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 28 QYLDQIKYILEHGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 87 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------P 102 ++G +N L GV IWD E+ DK +G+LGP+YG QWR + Sbjct: 88 VKGCTNSKELSAKGVKIWDANGSREFLDKQGFSTREEGDLGPVYGFQWRHFGAEYKDTHT 147 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ +WN I MALPPCH L QFYV + +LSCQ Sbjct: 148 DYSGQGVDQLQHVIDTIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVVDKELSCQ 207 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E +QL R Sbjct: 208 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHMEPLKIQLQR 267 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 SPR P++ I + ++ F +DF + Y+PH I +++V Sbjct: 268 SPRPFPKLKILRQVENIDDFTADDFLIEGYDPHPPIKMEMAV 309 >gi|332016288|gb|EGI57201.1| Thymidylate synthase [Acromyrmex echinatior] Length = 513 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 134/284 (47%), Positives = 180/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+ VI+ G+ + +RT + T S FG QMRF L G FPLLTTK+V W++V+ ELL Sbjct: 230 YQYLRLIEKVIQSGAKKSNRTAMDTYSIFGAQMRFSLRDGVFPLLTTKQVFWRAVIEELL 289 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WF++G +N L G+ IWDE + +G+LGP+YG QWR + Sbjct: 290 WFIKGSTNSKELSDKGIHIWDENGSRAFLDSCDFTDREEGDLGPVYGFQWRHFGAEYKDM 349 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+ ++ ++ P RR I+SAWN I KMALPPCH L QFYV+NG+LS Sbjct: 350 HTDYTGQGIDQLKEVIHKVKHSPEDRRIIISAWNPIDIPKMALPPCHTLVQFYVNNGELS 409 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH + Q+ Sbjct: 410 TQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEKQV 469 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I + D+ F EDF L Y P++ + K++V Sbjct: 470 KREPREFPKLRIVREVKDIDDFITEDFKLIDYNPYSKLYMKMAV 513 >gi|136609|sp|P12462|TYSY_HSVAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|331064|gb|AAA46170.1| thymidylate synthase [Ateline herpesvirus 2] Length = 290 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 134/283 (47%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL ++H++ G+ + DRTGVGT S FG Q R+ L K FPLLTTK+V W+ VV ELLW Sbjct: 8 HQYLSQVKHILNCGNFKHDRTGVGTLSVFGMQSRYSLEKDFPLLTTKRVFWRGVVEELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSWP------- 102 F+RG ++ L GV IWD + DK +G+LGP+YG QWR + Sbjct: 68 FIRGSTDSKELAASGVHIWDANGSRSYLDKLGLFDREEGDLGPVYGFQWRHFGAEYQGLK 127 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y G +DQ+ I+ ++ +P RR ++ AWNV + KMALPPCH L QFYV +GKLSC Sbjct: 128 HNYGGEGVDQLKQIINTIHTNPTDRRMLMCAWNVLDVPKMALPPCHVLSQFYVCDGKLSC 187 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT M+A V GEFIHTLGD H+Y NH + QL+ Sbjct: 188 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTDLVPGEFIHTLGDAHVYVNHVDALTEQLT 247 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + + + F+ D L +Y P+ +I ++V Sbjct: 248 RTPRPFPTLKFARKVASIDDFKANDIILENYNPYPSIKMPMAV 290 >gi|332373384|gb|AEE61833.1| unknown [Dendroctonus ponderosae] Length = 320 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 136/284 (47%), Positives = 177/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL+ ++ +++ G DRTGVGT S FG QMR+ L FPLLTTK+V W++VV ELL Sbjct: 37 HQYLNHIKLILEKGVKTADRTGVGTYSIFGAQMRYSLRDNIFPLLTTKRVFWRAVVEELL 96 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WF+RG +N L V IWD E+ D ++G+LGPIYG QWR + Sbjct: 97 WFIRGSTNAFELKDKNVHIWDANSTREFLDSVSLKDREEGDLGPIYGFQWRHFGAEYKGM 156 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY IDQ++ ++ ++R P RR I+ AWN I +MALPPCHCL QFYV NG+LS Sbjct: 157 RADYKNKGIDQLAHVINTIRNKPTDRRMIMCAWNPVDIPEMALPPCHCLVQFYVANGELS 216 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A + Q GEFIH+LGD H+Y NH E Q+ Sbjct: 217 CQLYQRSADMGLGVPFNIASYALLTYMIAHITNLQPGEFIHSLGDSHVYLNHVEPLKEQI 276 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I + + F EDF + Y PH + ++V Sbjct: 277 EREPRPFPTLQIKRKVETIEDFTAEDFEIVGYNPHPKLSMVMAV 320 >gi|13096424|pdb|1HW3|A Chain A, Structure Of Human Thymidylate Synthase Suggests Advantages Of Chemotherapy With Noncompetitive Inhibitors gi|66361120|pdb|1YPV|A Chain A, Structure Of Human Thymidylate Synthase At Low Salt Conditions gi|146387619|pdb|2ONB|A Chain A, Human Thymidylate Synthase At Low Salt Conditions With Pdpa Bound Length = 313 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPP H L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPXHALXQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|189095970|pdb|2RD8|B Chain B, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 Length = 313 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPP H L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPXHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|290560084|pdb|3EBU|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPP H L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPXHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|56753539|gb|AAW24972.1| SJCHGC01067 protein [Schistosoma japonicum] Length = 317 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 131/282 (46%), Positives = 187/282 (66%), Gaps = 21/282 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLWF 62 YL+LL++++ G++R DRT GT + FG Q+RF L + +PLLTTK V ++ +V ELLWF Sbjct: 36 YLNLLQYILAKGTERNDRTNTGTLAVFGPQLRFSLRNNEYPLLTTKTVFFRGIVEELLWF 95 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWR--------SWP 102 +RG +N L V WD E+ D ++G+LGPIYG QWR Sbjct: 96 IRGSTNSRELSEKNVHFWDANGSREFLDGLGFTEREEGDLGPIYGFQWRHSGAEYIDCRT 155 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ++ +++ +R P+ RR ++ AWNV + KMALPPCHCL QF+V NG+LSCQ Sbjct: 156 DYTGQGVDQLADVIKLIRERPWDRRILIVAWNVKDLRKMALPPCHCLVQFFVANGELSCQ 215 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LGIPFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E Q+ R Sbjct: 216 LYQRSGDMGLGIPFNIASYALLTYMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKR 275 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + ++ F++EDF L Y+P+ + K+++ Sbjct: 276 TPRPFPKLEIVREVENIDDFKFEDFKLIDYKPYPKLSMKMAL 317 >gi|194855206|ref|XP_001968495.1| GG24473 [Drosophila erecta] gi|190660362|gb|EDV57554.1| GG24473 [Drosophila erecta] Length = 304 Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL ++ G R DRT VGT S FG QMRF++ + FPLLTTK+V +++V ELLWF Sbjct: 22 QYLDLLSEILANGEQRMDRTEVGTLSMFGCQMRFNMRESFPLLTTKRVFFRAVAEELLWF 81 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 + G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 82 VAGKTDAKLLQAKNVHIWDGNSSREFLDSLGLTERSVGDLGPVYGFQWRHFGAEYATCDD 141 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSC 161 DY G IDQ+ ++ +++ +P RR I+SAWN + KM LPPCHCL QF+V G+LSC Sbjct: 142 DYSGKGIDQLRRVIDTIKNNPSDRRIILSAWNPVDMPKMVLPPCHCLAQFFVSTRGELSC 201 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E QL Sbjct: 202 QLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLK 261 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++ I + D+ FR+EDF + Y P+ I ++V Sbjct: 262 RTPRPFPKLNIKRQVQDIDDFRFEDFEIVDYNPYPKIKMDMAV 304 >gi|300172851|ref|YP_003772016.1| thymidylate synthase [Leuconostoc gasicomitatum LMG 18811] gi|299887229|emb|CBL91197.1| Thymidylate synthase [Leuconostoc gasicomitatum LMG 18811] Length = 322 Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 139/317 (43%), Positives = 183/317 (57%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + V+ G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV++ + ELLW Sbjct: 6 QQYLDLAKKVLDEGTQKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVYFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L +H IWDEWA K+ Sbjct: 66 FLRGDNNIRFLLQHNNHIWDEWAFKNWIESDQYTGPDMTNFGHRAQKDTAFALAYKEQKD 125 Query: 88 ----------------GELGPIYGVQWRSWPD----YDGNVIDQISSIVQSLRADPYSRR 127 G +G +YG WR+W D + IDQ+S +V+ ++ +P SRR Sbjct: 126 IFVDKILNDDEFMETFGYVGDVYGKLWRNWETSSLTADTDTIDQVSRLVEQIKTNPDSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNAEKTPQAPLPSCHVLSQFYVADGKLSVQLYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ G+F+HT+GD H+YNNH EQ QLSR LP++ +NP + L + +D Sbjct: 246 VAAQTGYEVGDFVHTIGDTHIYNNHTEQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + YE AI A V+V Sbjct: 306 KVLDYESEPAIKAPVAV 322 >gi|209965294|ref|YP_002298209.1| thymidylate synthase [Rhodospirillum centenum SW] gi|209958760|gb|ACI99396.1| thymidylate synthase [Rhodospirillum centenum SW] Length = 302 Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 135/290 (46%), Positives = 185/290 (63%), Gaps = 28/290 (9%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLLR +++ G+ R DRTGVGT + FG QMRFDLS+GFPLLTTK++ +K+ +HELLWF Sbjct: 13 QYLDLLRDLLERGARREDRTGVGTLALFGRQMRFDLSRGFPLLTTKRIFYKAAIHELLWF 72 Query: 63 LRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGPIY 94 L GD+ + L ++GV IW +W A + G+LGP+Y Sbjct: 73 LSGDTRLRPLLQNGVRIWTDWPLARYRRETGESIDQETFERRVLEDDAFAARWGDLGPVY 132 Query: 95 GVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154 G QWR+W DG V+DQI+ +V +R +P SRR + + WNV +++MALPPCH +Q++V Sbjct: 133 GKQWRAWETADGRVVDQIAQLVDGIRGNPTSRRLLFTGWNVGELERMALPPCHMTYQYFV 192 Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 +G+LS LYQRS D LG+P+N+ +LL MLA + GE + T DVHLY NH E Sbjct: 193 ADGRLSGILYQRSADTLLGLPWNLCEAALLIHMLAQQCDLEPGELVWTGADVHLYLNHVE 252 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QA QL R PR LP+++I L +R+EDF + Y+PH I A+V+V Sbjct: 253 QARQQLGREPRPLPRLVIRRRPESLFGYRFEDFAIEGYDPHPHIRAEVAV 302 >gi|85690907|ref|XP_965853.1| thymidylate synthase [Encephalitozoon cuniculi GB-M1] gi|85691163|ref|XP_965981.1| thymidylate synthase [Encephalitozoon cuniculi GB-M1] gi|51704239|sp|O62584|TYS1_ENCCU RecName: Full=Thymidylate synthase 1/2; Short=TS 1/2; Short=TSase 1/2 gi|266618852|pdb|3KGB|A Chain A, Crystal Structure Of Thymidylate Synthase 12 FROM Encephalitozoon Cuniculi At 2.2 A Resolution gi|19068420|emb|CAD24888.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1] gi|19068548|emb|CAD25016.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1] Length = 294 Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 139/285 (48%), Positives = 188/285 (65%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDL++H+++ G+ R DRTG GT S FG MRF L FPLLTT++V ++ VV ELL Sbjct: 10 HQYLDLVKHILENGARRMDRTGTGTLSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWR--------SW 101 +FLRG+++ L + GV IW++ K +G+LGPIYG QWR S Sbjct: 70 FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 Y+G +DQI+S + ++RA+P SRR +VSAWN + MALPPCH LFQF V +GKLSC Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H + Q+ Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQIQ 249 Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ ++P + F+YEDF L Y+PH AI +S Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMSA 294 >gi|145535888|ref|XP_001453677.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|2833339|sp|Q27828|DRTS_PARTE RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|434592|gb|AAC47025.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] gi|124421399|emb|CAK86280.1| unnamed protein product [Paramecium tetraurelia] Length = 462 Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 138/283 (48%), Positives = 176/283 (62%), Gaps = 21/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLD++ ++K G + DRTGVGT S FG MRF+L++ FPLLTTKKV ++ VV ELLW Sbjct: 181 NQYLDMITKIMKEGVSKDDRTGVGTMSIFGQTMRFNLAQSFPLLTTKKVFFRGVVEELLW 240 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101 FLRG++N L GV IW+ E+ D G +LGP+YG QWR + Sbjct: 241 FLRGNTNGKLLLDKGVKIWEGNGTREYLDTIGLQHRQEHDLGPVYGFQWRHFGAKYKDCQ 300 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY +DQ+ I+Q L+ +P SRR I+SAWN + +MALPPCH + QF+V NGKLSC Sbjct: 301 TDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMALPPCHVMSQFFVANGKLSC 360 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D LGIPFNIASY+LLT MLA GEF+H LGD H+Y+NH E Q+ Sbjct: 361 MMYQRSCDFGLGIPFNIASYALLTYMLAKECNLNLGEFVHVLGDTHIYSNHVEALKKQIE 420 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + I N L + YEDF L Y H I K++V Sbjct: 421 RVPYPFPLLKIKGN-KSLFDYTYEDFELVGYNAHDKIEMKMAV 462 >gi|30690081|ref|NP_195183.2| THY-2 (thymidylate synthase 2); dihydrofolate reductase/ thymidylate synthase [Arabidopsis thaliana] gi|150421542|sp|Q05763|DRTS2_ARATH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase 2; Short=DHFR-TS 2; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|110743754|dbj|BAE99713.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|332660994|gb|AEE86394.1| thymidylate synthase [Arabidopsis thaliana] Length = 565 Score = 268 bits (684), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 131/281 (46%), Positives = 174/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 285 YLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 344 Query: 64 RGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------PD 103 G +N L G+ IWD A + +G+LGP+YG QWR + D Sbjct: 345 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 404 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 405 YTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 464 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT +LA V G+FIH +GD H+Y NH QL Sbjct: 465 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 524 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP D+ SF +DF L Y+PH I K++V Sbjct: 525 PKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 565 >gi|19173335|ref|NP_597138.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1] gi|51702027|sp|Q8SRG2|TYS3_ENCCU RecName: Full=Thymidylate synthase 3; Short=TS 3; Short=TSase 3 gi|19170924|emb|CAD26314.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1] Length = 294 Score = 268 bits (684), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 139/285 (48%), Positives = 188/285 (65%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDL++H+++ G+ R DRTG GT S FG MRF L FPLLTT++V ++ VV ELL Sbjct: 10 HQYLDLVKHILENGARRMDRTGTGTLSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWR--------SW 101 +FLRG+++ L + GV IW++ K +G+LGPIYG QWR S Sbjct: 70 FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 Y+G +DQI+S + ++RA+P SRR +VSAWN + MALPPCH LFQF V +GKLSC Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H + Q+ Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQVQ 249 Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ ++P + F+YEDF L Y+PH AI +S Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMSA 294 >gi|256075176|ref|XP_002573896.1| bifunctional dihydrofolate reductase-thymidylate synthase [Schistosoma mansoni] gi|238659087|emb|CAZ30129.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Schistosoma mansoni] Length = 577 Score = 268 bits (684), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 132/282 (46%), Positives = 184/282 (65%), Gaps = 21/282 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLWF 62 YL+LLR+++ G +RRDRT GT FG Q+RF L + +PLLTTK V ++ +V ELLWF Sbjct: 296 YLNLLRYILANGVERRDRTDTGTFGVFGPQLRFSLRNHEYPLLTTKTVFFRGIVEELLWF 355 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWR--------SWP 102 +RG +N L V WD E+ D ++G+LGP+YG QWR Sbjct: 356 IRGSTNSRELAEKNVHFWDANGSREFLDGLGFTEREEGDLGPVYGFQWRHSGAEYVDCQT 415 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ++ +++ +R P+ RR ++ AWNV + KMALPPCHCL QFYV N +LSCQ Sbjct: 416 DYTGQGVDQLADVIKLIRERPWDRRIMIVAWNVKDLRKMALPPCHCLVQFYVANDELSCQ 475 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E Q+ R Sbjct: 476 LYQRSGDMGLGVPFNIASYALLTCMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKR 535 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + ++ F++EDF L Y+P+ I K+++ Sbjct: 536 VPRPFPKLEIIREVKNIDDFKFEDFKLIDYKPYPKIPMKMAL 577 >gi|289195|gb|AAA32789.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|3096926|emb|CAA18836.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|7270407|emb|CAB80174.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|27808622|gb|AAO24591.1| At4g34570 [Arabidopsis thaliana] Length = 518 Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 131/281 (46%), Positives = 174/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 238 YLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 297 Query: 64 RGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------PD 103 G +N L G+ IWD A + +G+LGP+YG QWR + D Sbjct: 298 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 357 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 358 YTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 417 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT +LA V G+FIH +GD H+Y NH QL Sbjct: 418 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 477 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP D+ SF +DF L Y+PH I K++V Sbjct: 478 PKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 518 >gi|164564740|dbj|BAF98221.1| CM0216.390.nc [Lotus japonicus] Length = 528 Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 133/283 (46%), Positives = 177/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL L++ +I G+ + DRTG GT S FG QMRF+L + FPLLTTKKV W+ VV ELLW Sbjct: 246 YKYLRLVQEIISEGTVKDDRTGTGTLSKFGCQMRFNLRRSFPLLTTKKVFWRGVVEELLW 305 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+ G ++ L G+ IWD E+ D ++G+LGP+YG QWR + Sbjct: 306 FISGSTSAKVLQEKGIHIWDGNASREYLDSIGLTEREEGDLGPVYGFQWRHFGARYTNMH 365 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV NG+LSC Sbjct: 366 DDYSGKGFDQLLDVINKIKHNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSC 425 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT M+A V G+FIH +GD H+Y NH + QL Sbjct: 426 QMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVKPLQEQLQ 485 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P + INP D+ SF DF L Y+PH I K++V Sbjct: 486 NLPRPFPILKINPKKKDIDSFEATDFKLIGYDPHQKIQMKMAV 528 >gi|307195505|gb|EFN77391.1| Thymidylate synthase [Harpegnathos saltator] Length = 302 Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 136/284 (47%), Positives = 181/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+ VIK G+ + +RTGV T S FG Q+RF L G FPLLTTK+V WK+VV ELL Sbjct: 19 YQYLRLIEKVIKSGTRKGNRTGVDTYSIFGTQLRFGLRDGVFPLLTTKRVFWKAVVEELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----------WADKD-GELGPIYGVQWRSW------- 101 WF++G +N L G+ IWD+ ++D++ G+LGP+YG QWR + Sbjct: 79 WFIKGSTNSKELADKGIHIWDKNGSRAFLDSCGFSDREEGDLGPVYGFQWRHYGAEYKDM 138 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+ ++ ++ P RR I+SAWN I KMALPPCH QFYV NG+LS Sbjct: 139 HTDYAGQGIDQLKEVIHKIKHSPDDRRIIMSAWNPTDIPKMALPPCHNFIQFYVSNGELS 198 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 QLYQRS D+ LG+PFNIASYSLL ++A V G + GEF+HT+GD H+Y NH + Q+ Sbjct: 199 AQLYQRSADMGLGVPFNIASYSLLIYIIAHVTGLKPGEFVHTMGDCHVYINHVSALEEQI 258 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I I D+ F EDF L Y PH+ + +++V Sbjct: 259 QRKPRNFPKLKIIREIKDIDDFVAEDFELIDYNPHSKLYMEMAV 302 >gi|301774490|ref|XP_002922670.1| PREDICTED: thymidylate synthase-like [Ailuropoda melanoleuca] Length = 324 Score = 267 bits (683), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 128/275 (46%), Positives = 171/275 (62%), Gaps = 20/275 (7%) Query: 10 HVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNV 69 H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF++G +N Sbjct: 50 HILRCGVRKDDRTGTGTLSVFGLQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNA 109 Query: 70 SYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PDYDGNVI 109 L GV IWD +D G+LGP+YG QWR + DY G I Sbjct: 110 KELSSKGVKIWDANGSRDFLDSLGFCSREEGDLGPVYGFQWRHFGAEYKDMDSDYSGQGI 169 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ +++ +P RR I+ WN + MALPPCH L QFYV NG+LSCQLYQRSGD Sbjct: 170 DQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSGD 229 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R PR P+ Sbjct: 230 MGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKMQLQREPRPFPK 289 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + I + + F+ EDF + Y PH I +++V Sbjct: 290 LKILRKVETIDDFKAEDFQIEGYCPHPTIKMEMAV 324 >gi|195446571|ref|XP_002070828.1| GK18710 [Drosophila willistoni] gi|194166913|gb|EDW81814.1| GK18710 [Drosophila willistoni] Length = 354 Score = 267 bits (683), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 128/281 (45%), Positives = 179/281 (63%), Gaps = 22/281 (7%) Query: 6 DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRG 65 DLLR +I+ G R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V ELLWF++G Sbjct: 74 DLLRSIIERGETRIDRTRVGTLSIFGSQMRFDMRESFPLLTTKRVFFRAVAEELLWFIKG 133 Query: 66 DSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PDYD 105 ++ L V IWD + ++ G+LGP+YG QWR + DY Sbjct: 134 KTDAKILQDKNVHIWDGNSTREFLDNLGFTDRAVGDLGPVYGFQWRHFGAEYRTCQDDYT 193 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--LSCQL 163 G +DQ+ ++++++ +P RR I+SAWN + KMALPPCHCL QFYV + LSCQL Sbjct: 194 GQGVDQLRQVIETIKTNPSDRRIIMSAWNPLDLPKMALPPCHCLAQFYVSQSRNELSCQL 253 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y +H E QL R+ Sbjct: 254 YQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLSHVEPIKEQLKRT 313 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ + D+ F YED + +Y P+ I +++V Sbjct: 314 PRPFPKLAFKRQVTDIEDFTYEDIEIVNYNPYPKIQMEMAV 354 >gi|168012488|ref|XP_001758934.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690071|gb|EDQ76440.1| predicted protein [Physcomitrella patens subsp. patens] Length = 520 Score = 267 bits (683), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 135/277 (48%), Positives = 173/277 (62%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L+ +IK G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW Sbjct: 238 YQYLNLIDDIIKTGAVKGDRTGTGTISKFGCQMRFNLRKSFPLLTTKRVFWRGVVEELLW 297 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ G +N LH GV IWD E+ DK +G+LGP+YG QWR + Sbjct: 298 FISGSTNAKVLHDKGVKIWDGNGSREYLDKQGLTEREEGDLGPVYGFQWRHFGAKYVDMH 357 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ DP RR ++SAWN A + MALPPCH QFYV NG+LSC Sbjct: 358 ADYTGQGYDQLKDVINKIKTDPDDRRILLSAWNPADLKLMALPPCHMFAQFYVANGELSC 417 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT +LA V G+F+H LGD H+Y NH E QL Sbjct: 418 QMYQRSCDMGLGVPFNIASYALLTCILAHVCDLVPGDFVHVLGDAHVYKNHVEPLQEQLQ 477 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 +P P++ I D+ SF DF L Y+ H I Sbjct: 478 NTPMPFPRLRIKTANRDIDSFVAADFELIGYKAHQKI 514 >gi|50365237|ref|YP_053662.1| thymidylate synthase [Mesoplasma florum L1] gi|62901302|sp|Q6F145|TYSY_MESFL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|50363793|gb|AAT75778.1| thymidylate synthase [Mesoplasma florum L1] Length = 288 Score = 267 bits (683), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 134/294 (45%), Positives = 180/294 (61%), Gaps = 36/294 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ ++K G R DRT GT S FG Q R+DL +GFPLLTTKKV +K++ HE+L Sbjct: 1 MKQYLELVNEILKDGEKREDRTNTGTISKFGVQKRYDLREGFPLLTTKKVFYKAIFHEML 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL + V IW+EW +K G+LG Sbjct: 61 WFIKGDTNIKYLVENNVKIWNEWPYENFKKSSEFNNETLQEFVERLKNDNEFCNKWGDLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR D+ G IDQ + ++ ++ +P+SRRHIVSAWN A +D M LPPCH +Q Sbjct: 121 PVYGKQWR---DFGG--IDQFAKLINDIKKNPFSRRHIVSAWNPAEVDNMLLPPCHSFWQ 175 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 YV +G L QLYQRSGDVFLG+PFNIASY+LL ++A + F+HT+GD H+Y Sbjct: 176 VYVSKDGWLDLQLYQRSGDVFLGVPFNIASYALLMELIAKECNLKARYFVHTIGDAHIYL 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH EQ + QL R P L ++ IN + +ED + YE HA I +V+V Sbjct: 236 NHLEQINEQLKRKPLPLCKIKINSE-KSIFDIAFEDIEIEGYESHAKITGEVAV 288 >gi|281350922|gb|EFB26506.1| hypothetical protein PANDA_011650 [Ailuropoda melanoleuca] Length = 276 Score = 267 bits (683), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 128/276 (46%), Positives = 171/276 (61%), Gaps = 20/276 (7%) Query: 9 RHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN 68 H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF++G +N Sbjct: 1 EHILRCGVRKDDRTGTGTLSVFGLQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTN 60 Query: 69 VSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PDYDGNV 108 L GV IWD +D G+LGP+YG QWR + DY G Sbjct: 61 AKELSSKGVKIWDANGSRDFLDSLGFCSREEGDLGPVYGFQWRHFGAEYKDMDSDYSGQG 120 Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 IDQ+ ++ +++ +P RR I+ WN + MALPPCH L QFYV NG+LSCQLYQRSG Sbjct: 121 IDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSG 180 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R PR P Sbjct: 181 DMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKMQLQREPRPFP 240 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ I + + F+ EDF + Y PH I +++V Sbjct: 241 KLKILRKVETIDDFKAEDFQIEGYCPHPTIKMEMAV 276 >gi|256032568|pdb|3EGY|X Chain X, Crystal Structure Of Human Thymidyalte Synthase A191k With Loop 181-197 Stabilized In The Inactive Conformation Length = 313 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 129/282 (45%), Positives = 174/282 (61%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + M LPP H L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMKLPPXHALXQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|307166222|gb|EFN60452.1| Thymidylate synthase [Camponotus floridanus] Length = 298 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 135/284 (47%), Positives = 179/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+ VI+ G+ R +RTGV T S FG Q+RF L G FPLLTTK+V W++VV ELL Sbjct: 15 YQYLRLVEKVIRTGAKRNNRTGVDTYSIFGTQIRFSLRDGVFPLLTTKRVFWRAVVEELL 74 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WF++G +N L GV IWDE + +G+LGP+YG QWR + Sbjct: 75 WFIKGSTNSKELSDKGVHIWDENGSRAFLDSCGFTDREEGDLGPVYGFQWRHFGAEYKDI 134 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+ ++ ++ P RR I+S WN I +MALPPCH L QFYV+NG+LS Sbjct: 135 RTDYTGQGIDQLKEVIHKIKHCPDDRRIIMSNWNPVDIPEMALPPCHVLVQFYVNNGELS 194 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH + Q+ Sbjct: 195 AQLYQRSADIGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEEQI 254 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I I ++ F ED L Y+P+ + K++V Sbjct: 255 KREPREFPKLRIVREIKNIDDFVAEDLELIDYKPYPKLYMKMAV 298 >gi|317420036|emb|CBN82072.1| Thymidylate synthase [Dicentrarchus labrax] Length = 325 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 127/281 (45%), Positives = 175/281 (62%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLD + ++++ G + DRTG G S FG Q R++L FPLLTTK+V WK ++ ELLWF+ Sbjct: 45 YLDQIEYIMEHGRRKGDRTGTGVVSVFGTQARYNLRDQFPLLTTKRVFWKGILEELLWFI 104 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103 +G +N L GV IWD +D G+LGP+YG QWR + D Sbjct: 105 KGSTNAKELSAKGVKIWDANGSRDFLDNLGFTDREEGDLGPVYGFQWRHFGAEYTNMHAD 164 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV + +LSCQL Sbjct: 165 YTGQGVDQLQKVIDTIKKNPEDRRIIMCAWNPKDMPNMALPPCHALCQFYVCDSELSCQL 224 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R Sbjct: 225 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYINHIEPLKVQLQRE 284 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ I + + FR EDF + Y PH AI +++V Sbjct: 285 IRPFPKLKILRKVESIDDFRAEDFEICDYNPHPAIKMQMAV 325 >gi|159484697|ref|XP_001700389.1| predicted protein [Chlamydomonas reinhardtii] gi|158272276|gb|EDO98078.1| predicted protein [Chlamydomonas reinhardtii] Length = 478 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 131/283 (46%), Positives = 176/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L+R +I G R DRTG GT S FG R++L FPLLT+K+V WK V ELLW Sbjct: 196 QQYLELVRELITSGVFRPDRTGTGTYSRFGRTSRYNLRHTFPLLTSKRVFWKGVAEELLW 255 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+ G +N + L + IWD + ++ G+LGP+YG QWR + Sbjct: 256 FISGATNANLLRDKNIHIWDGNSSREFLDGRGLGHREVGDLGPVYGFQWRHFGAEYKDMH 315 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ I+ +L+ DP RR ++SAWN A + +MALPPCH QFYV +G+LSC Sbjct: 316 TDYTGKGVDQLRYIIDTLKKDPNDRRMVMSAWNPAALAEMALPPCHMFCQFYVADGELSC 375 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS DV LG+PFNIASY+LLT ++A V G + GE +H +GD H+Y NH E QL Sbjct: 376 LMYQRSCDVGLGVPFNIASYALLTRLVAQVTGLRAGELVHVMGDTHVYANHVEPLREQLK 435 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P + INP+ D+ SF +EDF L Y PH I +++V Sbjct: 436 NTPRHFPTLRINPDKKDIDSFVFEDFELVDYNPHKTIKMQMAV 478 >gi|31790281|gb|AAP57962.1| dihydrofolate reductase/thymidilate synthase [Babesia bovis] Length = 511 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 131/281 (46%), Positives = 179/281 (63%), Gaps = 20/281 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+L V+ G + +RTG S FGYQMRFDLS+ FPLLTTKKV +S++ ELLWF Sbjct: 230 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 289 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++G +N + L V IW+ E+ DK+G +LGPIYG QWR + Sbjct: 290 IKGSTNGNDLLAKNVRIWELNGRREFLDKNGFTEREEHDLGPIYGFQWRHFGAEYLDMHA 349 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G IDQ++ I+ ++ +P RR IV +WNV+ + KMALPPCHC FQFYV + KLSC Sbjct: 350 DYTGKGIDQLAEIINRIKTNPNDRRMIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 409 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYS+LT M+A V G GEF+H L D H+Y +H + Q++R Sbjct: 410 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 469 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P P++ +NP+I ++ F +D + Y H AI +S Sbjct: 470 IPYPFPRLRLNPDIKNIEDFTIDDIVVEDYVSHPAIPMAMS 510 >gi|209878892|ref|XP_002140887.1| thymidylate synthase family protein [Cryptosporidium muris RN66] gi|209556493|gb|EEA06538.1| thymidylate synthase family protein [Cryptosporidium muris RN66] Length = 549 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 133/283 (46%), Positives = 185/283 (65%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+L +V++ G R +RTG+ T S FG MRFDL + FPLLTTK V + + EL+WF Sbjct: 267 QYLDMLSNVLQNGHYRENRTGINTYSIFGASMRFDLRESFPLLTTKNVALRIIFEELMWF 326 Query: 63 LRGDSNVSYLHRHGVSIW-----DEWADKDG-------ELGPIYGVQWRSW--------P 102 ++GD+N ++L V IW E+ +K G +LGPIYG QWR + Sbjct: 327 IKGDTNGNHLLDKKVFIWAGNGSKEYLNKVGLGYREENDLGPIYGFQWRHFNAEYKTMHD 386 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-KLSC 161 +Y+G +DQ++++++SL+ +PY RRHI+SAWN + + MALPPCH L QFYVDN +LSC Sbjct: 387 NYNGQGVDQLANLIESLKKNPYDRRHILSAWNPSAVKYMALPPCHILSQFYVDNNNRLSC 446 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASYSLL +M+A + G++ GEFIH +GDVH+Y NH EQ Q+ Sbjct: 447 SLYQRSCDLGLGCPFNIASYSLLCVMIAHICGYEPGEFIHFIGDVHIYENHVEQLKQQIK 506 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR PQ+ + + + F +ED + Y PH I +++V Sbjct: 507 RLPRPFPQLRLKRKVDKVEDFIWEDIEIIGYYPHPTIRMEMAV 549 >gi|301111324|ref|XP_002904741.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 [Phytophthora infestans T30-4] gi|262095071|gb|EEY53123.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 [Phytophthora infestans T30-4] Length = 509 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 132/284 (46%), Positives = 178/284 (62%), Gaps = 23/284 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL+R ++ G+ R DRTG GT S FG QMRF L FPLLTTK+V W+ V ELLW Sbjct: 208 QYLDLIRKILTQGAKREDRTGTGTLSVFGAQMRFSLRNNVFPLLTTKRVFWRGVAEELLW 267 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+ GD++ L + + IWD ++ G+LGP+YG QWR + Sbjct: 268 FISGDTSAHTLQQKDIHIWDGNGSREYLDSRGLQHREVGDLGPVYGFQWRHFGAKYTDMH 327 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ LR +P RR ++SAWN + +++MALPPCH QFYV NG+LSC Sbjct: 328 ADYTGKGVDQLAEVIHKLRTNPTDRRIVLSAWNPSDLNEMALPPCHMFCQFYVANGELSC 387 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT ++A V G + GEFIH +GD H+Y NH E QL+ Sbjct: 388 QMYQRSADMGLGVPFNIASYALLTRLVAQVTGLKPGEFIHVIGDAHVYLNHVEPLQKQLT 447 Query: 222 RSPRTLPQMIINPNIVDLL-SFRYEDFT-LRSYEPHAAILAKVS 263 R+P P + INP + F +EDF + Y A +L K+S Sbjct: 448 RTPCPFPTLHINPEKTSSIDEFTFEDFEWVSDYAGSAIVLCKLS 491 >gi|3097066|emb|CAA06648.1| thymidylate synthase [Encephalitozoon cuniculi] Length = 294 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 138/285 (48%), Positives = 187/285 (65%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDL++H+++ G+ R DRTG G S FG MRF L FPLLTT++V ++ VV ELL Sbjct: 10 HQYLDLVKHILENGARRMDRTGTGALSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWR--------SW 101 +FLRG+++ L + GV IW++ K +G+LGPIYG QWR S Sbjct: 70 FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 Y+G +DQI+S + ++RA+P SRR +VSAWN + MALPPCH LFQF V +GKLSC Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H + Q+ Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQIQ 249 Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ ++P + F+YEDF L Y+PH AI +S Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMSA 294 >gi|306921962|dbj|BAJ17638.1| dihydrofolate reductase [Neospora caninum] Length = 612 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 134/285 (47%), Positives = 178/285 (62%), Gaps = 23/285 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL+ +I G+ DRTGVG S FG MRF L K FPLLTTK+V WK V+ ELLWF Sbjct: 328 QYLDLIADIINNGATMDDRTGVGVISKFGCTMRFSLDKAFPLLTTKRVFWKGVLEELLWF 387 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 +RGD+N ++L GV IWD+ ++ G++GP YG QWR + Sbjct: 388 IRGDTNANHLSEKGVKIWDKNVTREFLDSRNLSHREVGDIGPGYGFQWRHFGATYKDMHT 447 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ+ ++ LR +P RR +++AWN A +D+MALPPCH L QFYV+N + LSC Sbjct: 448 DYTGQGVDQLKKVINMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVENDRDLSC 507 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS DV LG+PFNIASYSLLT+M+A V + EFIH +G+ H+Y+NH E QL Sbjct: 508 VMYQRSCDVGLGVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYSNHVEALKEQLR 567 Query: 222 RSPRTLP--QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ I ++ F EDF + Y PH I +++V Sbjct: 568 REPRPFPIVNILNKERIQEIDDFTAEDFEVVGYVPHGRIQMEMAV 612 >gi|290972164|ref|XP_002668828.1| predicted protein [Naegleria gruberi] gi|284082356|gb|EFC36084.1| predicted protein [Naegleria gruberi] Length = 535 Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 130/286 (45%), Positives = 184/286 (64%), Gaps = 24/286 (8%) Query: 3 QYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLD+++ +I + R +RTGVGT S FGYQM++ L FPLLTTK+V WK V EL Sbjct: 250 QYLDIIKELILSDINVREERTGVGTVSKFGYQMKYSLRNNVFPLLTTKRVFWKGVAKELF 309 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WF+ G +N L + IWD E+ D G +LGP+YG QWR W Sbjct: 310 WFISGSTNAKILSEQDIHIWDGNGSREYLDSLGFENREEMDLGPVYGFQWRHWGSSYENM 369 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158 DY +DQ+ +++L+ +P +RR I+SAWNV+ + MALPPCH + QF+VD + Sbjct: 370 HTDYTNKGVDQLKKCIETLKNNPTNRRIILSAWNVSDLPNMALPPCHLMCQFWVDTDTNE 429 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQ+YQRS D+ LG+PFNIASY+LLT ++A V + G+FIHTLGD H+Y NH E Sbjct: 430 LSCQMYQRSCDMGLGVPFNIASYALLTRLMAQVCNLKPGDFIHTLGDTHVYKNHIEPLKK 489 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+ R P+ P ++++P+I ++ F++E TL++YEPHA I +++V Sbjct: 490 QIERDPKHFPLLLLDPSITNIDDFKFEHLTLQNYEPHATIKMEMAV 535 >gi|170017673|ref|YP_001728592.1| thymidylate synthase [Leuconostoc citreum KM20] gi|169804530|gb|ACA83148.1| Thymidylate synthase [Leuconostoc citreum KM20] Length = 319 Score = 264 bits (675), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 139/314 (44%), Positives = 179/314 (57%), Gaps = 51/314 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + ++ G + DRTG GT S FG QMRF+L +GFPLLTTKKV + + ELLW Sbjct: 6 QQYLDLAQKILDEGHLKGDRTGTGTHSLFGSQMRFNLQEGFPLLTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 66 FLRGDNNIRFLLQHNNHIWDEWAFKNWVSSEEYSGPDMTNFSHRAQEDADFAAAYQAQKA 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDG-NVIDQISSIVQSLRADPYSRRHIV 130 +K G +G +YG WR W G N IDQ++ +V ++A P SRR I+ Sbjct: 126 IFVDNILNDDDFMEKFGYIGDVYGKLWRGWETISGENAIDQVNRLVNQIKATPDSRRLIL 185 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 +AWN + LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL M+A+ Sbjct: 186 TAWNAETTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHMVAA 245 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G++ G+FIHT+GD H+YNNH EQ QLSR LP++ +NP + L + +D + Sbjct: 246 QTGYEVGDFIHTIGDTHIYNNHIEQITEQLSRPMHHLPKLWLNPEVKSLFDYTMDDIKVL 305 Query: 251 SYEPHAAILAKVSV 264 YE AI A V+V Sbjct: 306 DYESEPAIKAPVAV 319 >gi|1706522|sp|P51820|DRTS_SOYBN RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|999190|gb|AAB34317.1| dihydrofolate reductase-thymidylate synthase [Glycine max] gi|1096144|prf||2111237A dihydrofolate reductase-thymidylate synthase Length = 530 Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 134/281 (47%), Positives = 172/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L++ +I G+ + DRTG GT S FG QMRF+L FPLLTTKKV W+ VV ELLWF+ Sbjct: 250 YLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVEELLWFI 309 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSWP--------D 103 G +N L G+ IWD E+ D ++G+LGP+YG QWR + D Sbjct: 310 SGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFGARYTDMHHD 369 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + MALPPCH QFYV +G+LSCQ+ Sbjct: 370 YSGQGFDQLLDVINKIKRNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVAHGELSCQM 429 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LGIPFNIASY+LLT M+A V G+FIH +GD H+Y NH QL Sbjct: 430 YQRSADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPLQEQLHNQ 489 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP D+ SF DF L Y+PH I K+SV Sbjct: 490 PKPFPTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLSV 530 >gi|17158171|ref|NP_477589.1| wsv067 [Shrimp white spot syndrome virus] gi|15021446|gb|AAK77723.1|AF369029_54 ORF54, putative thymidylate synthase [shrimp white spot syndrome virus] gi|17016465|gb|AAL33071.1| wsv067 [shrimp white spot syndrome virus] Length = 289 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 21/279 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60 HQYL+L+R +++ G + DRTG GT S FG QMRF L P+LTTKK+ W+ VV ELL Sbjct: 5 HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELL 64 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------- 101 WF+RG+++ L + + IW+ E+ D +G+LGP+YG QWR + Sbjct: 65 WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGFQWRHFGAEYDTC 124 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+++I+++LR +P RR I++AWN + MALPPCH QFYV NG+LS Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGDV LG+PFNIASYSLLT ++AS++G + GEFI TLGD H+YN H E QL Sbjct: 185 CQLYQRSGDVGLGVPFNIASYSLLTHLMASMVGLKPGEFILTLGDAHIYNTHIEVLKKQL 244 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 R PR P++ I + F + F L Y+PH+ L Sbjct: 245 CRVPRPFPKLRILMAPEKIEDFTIDMFYLEGYQPHSGNL 283 >gi|289466115|gb|ADC94828.1| dihydrofolate reductase-thymidylate synthase [Plasmodium billbrayi] Length = 608 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 126/277 (45%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIIMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 445 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAEFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602 >gi|156084246|ref|XP_001609606.1| dihydrofolate reductase/thymidilate synthase [Babesia bovis] gi|256032857|pdb|3I3R|A Chain A, X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE SYNTHASE From Babesia Bovis At 2.35a Resolution gi|256032858|pdb|3I3R|B Chain B, X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE SYNTHASE From Babesia Bovis At 2.35a Resolution gi|261278903|pdb|3K2H|A Chain A, Co-Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE Synthase From Babesia Bovis With Dump, Pemetrexed And Nadp gi|261278904|pdb|3K2H|B Chain B, Co-Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE Synthase From Babesia Bovis With Dump, Pemetrexed And Nadp gi|268612472|pdb|3KJR|A Chain A, Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE SYN Babesia Bovis Determined Using Slipchip Based Microfluidics gi|268612473|pdb|3KJR|B Chain B, Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE SYN Babesia Bovis Determined Using Slipchip Based Microfluidics gi|154796858|gb|EDO06038.1| dihydrofolate reductase/thymidylate synthase [Babesia bovis] Length = 511 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 129/282 (45%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+L V+ G + +RTG S FGYQMRFDLS+ FPLLTTKKV +S++ ELLWF Sbjct: 230 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 289 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++G +N + L V IW+ ++ DK+G +LGPIYG QWR + Sbjct: 290 IKGSTNGNDLLAKNVRIWELNGRRDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHA 349 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G IDQ++ I+ ++ +P RR IV +WNV+ + KMALPPCHC FQFYV + KLSC Sbjct: 350 DYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 409 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYS+LT M+A V G GEF+H L D H+Y +H + Q++R Sbjct: 410 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 469 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P P++ +NP+I ++ F +D + Y H I +S Sbjct: 470 IPHPFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMSA 511 >gi|84501616|ref|ZP_00999788.1| Thymidylate synthase [Oceanicola batsensis HTCC2597] gi|84390237|gb|EAQ02796.1| Thymidylate synthase [Oceanicola batsensis HTCC2597] Length = 298 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 135/293 (46%), Positives = 180/293 (61%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLDLL V++ G +R DRTGVGTRS FG +RFDLS+ P+LTTK+V+WK+ V E+L Sbjct: 6 YQYLDLLSQVLENGDERTDRTGVGTRSIFGAMVRFDLSEDTVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L R V IW +W A + GELGP Sbjct: 66 WFLTGGTNIQPLLRENVRIWTDWPLATYRRETGEDIGQDVFEQRILEDDAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +V++LR +P SRR + WNVA + MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWLGSDGKEHDQIADLVRTLRENPASRRMLFHGWNVAELGGMALPPCHMVYQY 185 Query: 153 YVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+C L+QRS D+ LG PFN + L +MLA G + GE + GDVHLY N Sbjct: 186 HVTTDGRLNCLLFQRSADLLLGAPFNYVGATSLQLMLAQQAGLRPGELVWVGGDVHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q+SR PR LP+M + + +R EDF + Y PHAAI A+V+V Sbjct: 246 HLDQAREQMSREPRPLPRMRLLRQAESIDGYRIEDFEVEGYAPHAAIRAEVAV 298 >gi|296111709|ref|YP_003622091.1| thymidylate synthase [Leuconostoc kimchii IMSNU 11154] gi|295833241|gb|ADG41122.1| thymidylate synthase [Leuconostoc kimchii IMSNU 11154] Length = 322 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 138/317 (43%), Positives = 181/317 (57%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + V+ G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV++ + ELLW Sbjct: 6 QQYLDLAQKVLNEGALKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVYFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L +H IWDEWA K+ Sbjct: 66 FLRGDNNIRFLLQHNNHIWDEWAFKNWVESDQYTGPDMTNFGHRAIEDPEFAATYKIQKD 125 Query: 88 ----------------GELGPIYGVQWRSWP----DYDGNVIDQISSIVQSLRADPYSRR 127 G +G +YG WR+W + D IDQ+S +V ++ P SRR Sbjct: 126 IFVDKILNDDDFMATFGYVGDVYGKLWRNWETTSLNADEGTIDQVSRLVHDIKTTPDSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSVQLYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ G+F+HT+GD H+YNNH +Q QLSR LP++ +NP + L + +D Sbjct: 246 VAAQTGYEVGDFVHTIGDTHIYNNHVDQITEQLSRPMHQLPKIWLNPEVKSLFDYTMDDI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + YE AI A V+V Sbjct: 306 KILDYESEPAIKAPVAV 322 >gi|57100565|ref|XP_533309.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Canis familiaris] Length = 325 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 127/269 (47%), Positives = 167/269 (62%), Gaps = 20/269 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H++ G+ + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 33 QYLGQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 92 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGPIYG QWR + Sbjct: 93 IKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREEGDLGPIYGFQWRHFGAEYKDKDS 152 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ WN + MALPPCH L QFYV NG+LSCQ Sbjct: 153 DYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQ 212 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 213 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 272 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 PR P++ I + + F+ EDF + Sbjct: 273 EPRPFPKLRILRRVEKIDDFKAEDFQIEG 301 >gi|237835909|ref|XP_002367252.1| bifunctional dihydrofolate reductase / thymidylate synthase [Toxoplasma gondii ME49] gi|729370|sp|Q07422|DRTS_TOXGO RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|295357|gb|AAB00163.1| dihydrofolate reductase-thymidylate synthase [Toxoplasma gondii] gi|211964916|gb|EEB00112.1| bifunctional dihydrofolate reductase / thymidylate synthase [Toxoplasma gondii ME49] gi|221484873|gb|EEE23163.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Toxoplasma gondii GT1] gi|221506073|gb|EEE31708.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Toxoplasma gondii VEG] Length = 610 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 133/285 (46%), Positives = 177/285 (62%), Gaps = 23/285 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL+ +I G DRTGVG S FG MR+ L + FPLLTTK+V WK V+ ELLWF Sbjct: 326 QYLDLIADIINNGRTMDDRTGVGVISKFGCTMRYSLDQAFPLLTTKRVFWKGVLEELLWF 385 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 +RGD+N ++L GV IWD+ ++ G++GP YG QWR + Sbjct: 386 IRGDTNANHLSEKGVKIWDKNVTREFLDSRNLPHREVGDIGPGYGFQWRHFGAAYKDMHT 445 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSC 161 DY G +DQ+ +++Q LR +P RR +++AWN A +D+MALPPCH L QFYV D +LSC Sbjct: 446 DYTGQGVDQLKNVIQMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVNDQKELSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS DV LG+PFNIASYSLLT+M+A V + EFIH +G+ H+Y NH E QL Sbjct: 506 IMYQRSCDVGLGVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYTNHVEALKEQLR 565 Query: 222 RSPRTLP--QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ I ++ F EDF + Y PH I +++V Sbjct: 566 REPRPFPIVNILNKERIKEIDDFTAEDFEVVGYVPHGRIQMEMAV 610 >gi|91093359|ref|XP_969294.1| PREDICTED: similar to thymidylate synthase [Tribolium castaneum] gi|270015300|gb|EFA11748.1| hypothetical protein TcasGA2_TC004238 [Tribolium castaneum] Length = 313 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 130/278 (46%), Positives = 176/278 (63%), Gaps = 21/278 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL +R +++ G R DRT +GT S FG QMR+ L FPLLTTK+V W++VV ELL Sbjct: 30 YQYLSHIRQILEKGVQRMDRTRIGTLSIFGVQMRYSLRDNVFPLLTTKRVFWRAVVEELL 89 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102 WF++G +N + L V IWD + + +G+LGPIYG QWR + Sbjct: 90 WFIKGSTNSNDLKEKNVHIWDANSSRAFLDSVGLEEYEEGDLGPIYGFQWRHFGAEYKGV 149 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY +DQ++ ++ ++R +P RR I+SAWN + KMALPPCHCL QF+V G+LS Sbjct: 150 QGDYTNEGVDQLARVIHTIRTNPNDRRIIMSAWNPKDLHKMALPPCHCLAQFFVAEGELS 209 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQR+GD+ LG+PFNIASY+LLT M+A V G + GEFIH++GD H+Y NH E QL Sbjct: 210 CLLYQRAGDMGLGVPFNIASYALLTRMIAHVTGLKPGEFIHSIGDSHVYLNHVEPIKEQL 269 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 +R PR P + I + + F +EDF L Y PH + Sbjct: 270 TRVPRAFPTLNIKRPVSSIDDFTFEDFELVGYNPHPKL 307 >gi|21702230|emb|CAD38046.1| dihydrofolate reductase-thymidylate synthase [Pisum sativum] Length = 530 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 130/283 (45%), Positives = 174/283 (61%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL+L++ +I G+ + DRTG GT S FG QMRF+L +GFPLLTTK+V W+ VV ELLW Sbjct: 248 YMYLNLVQEIISQGTSKGDRTGTGTLSKFGCQMRFNLRRGFPLLTTKRVFWRGVVEELLW 307 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+ G +N L G+ IWD+ A ++ G+LGP+YG QWR + Sbjct: 308 FISGSTNAKVLQEKGIHIWDDNASREFLDSIGLSEREEGDLGPVYGFQWRHFGARYTNMH 367 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ ++ +P RR I+SAWN A + MALPPCH QFYV NG+LSC Sbjct: 368 NDYAGQGVDQLLDVINKVKHNPDDRRIILSAWNPADLKLMALPPCHMSAQFYVANGELSC 427 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+ QRS D+ LG+PFNIASY+LLT M+A + G+FIH LGD H+Y H QL Sbjct: 428 QMNQRSADMGLGVPFNIASYALLTCMIAHICELVPGDFIHVLGDAHVYQTHVRPLQEQLH 487 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + IN D+ SF DF L Y+PH I K++V Sbjct: 488 NLPKPFPTLKINSKKKDIDSFVATDFKLIDYDPHQKIEMKMAV 530 >gi|13242405|ref|NP_077428.1| thymidylate synthase [Cercopithecine herpesvirus 9] gi|11036557|gb|AAG27186.1|AF275348_6 thymidylate synthetase [Cercopithecine herpesvirus 9] Length = 295 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 126/283 (44%), Positives = 175/283 (61%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+ + ++ G + DRTG GT S FG Q R++L FPLLTTK+V WK VV ELLW Sbjct: 13 YQYLEQVNFILHNGVQKTDRTGTGTLSVFGMQSRYNLRNEFPLLTTKRVFWKGVVEELLW 72 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101 F++G +N + L GV IW K +G+LGP+YG QWR + Sbjct: 73 FIKGSTNSTELVEKGVKIWSAHGSKQFLHSNGFDNRQEGDLGPVYGFQWRHFGAEYVDMN 132 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y G +DQ+ +++ ++ +P RR I+ AWN + MALPPCH L QFYV N +LSC Sbjct: 133 TNYFGQGVDQLQNVINLIKTNPNDRRIILCAWNAKDVPLMALPPCHMLCQFYVANNELSC 192 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT M+A V + G+ +HT+GD H+Y NH E LQL+ Sbjct: 193 QMYQRSADMGLGVPFNIASYALLTYMIAHVTDLKTGDLVHTIGDAHIYLNHIEPLKLQLT 252 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + I + D+ F+ +DF L Y PH +I ++SV Sbjct: 253 RQPKQFPTLRITRTVKDINDFKADDFVLEGYNPHNSIPMEMSV 295 >gi|73961995|ref|XP_849163.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Canis familiaris] Length = 325 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 127/269 (47%), Positives = 167/269 (62%), Gaps = 20/269 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H++ G+ + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 33 QYLRQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 92 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGPIYG QWR + Sbjct: 93 IKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREEGDLGPIYGFQWRHFGAEYKDKDS 152 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ WN + MALPPCH L QFYV NG+LSCQ Sbjct: 153 DYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQ 212 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 213 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 272 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 PR P++ I + + F+ EDF + Sbjct: 273 EPRPFPKLRILRRVEKIDDFKAEDFQIEG 301 >gi|156552231|ref|XP_001606421.1| PREDICTED: similar to ENSANGP00000013700 [Nasonia vitripennis] Length = 313 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 130/284 (45%), Positives = 177/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+ +I G+ + DRTGVGT FG QMRF L G FPLLTTK V W++VV ELL Sbjct: 30 YQYLKLIERIIAKGAVKTDRTGVGTHFIFGTQMRFSLRDGIFPLLTTKNVLWRAVVEELL 89 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WF++G +N L GV IW+ E+ D ++G+LGP+YG QWR + Sbjct: 90 WFIKGSTNAKELADKGVKIWNANSSREFLDSCGFTDREEGDLGPVYGFQWRHFGAKYVNM 149 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+ ++ ++ P RR I+ AWN I MALPPCH L QF V +G+LS Sbjct: 150 HTDYTGQGVDQLQDVINKIKNKPDDRRIIMCAWNPVDIPIMALPPCHALVQFCVADGELS 209 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASYSLLT M+A + + G+F+HT+GD H+Y NH Q+ Sbjct: 210 CQLYQRSADMGLGVPFNIASYSLLTCMIAHITNLKPGDFVHTMGDCHVYRNHVPALKEQI 269 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +R P+ P + I + ++ F+ DF L +Y+PHA I ++V Sbjct: 270 ARKPKPFPTLKITRKVENIDDFKSTDFELNNYKPHAKIYMPMAV 313 >gi|300508797|pdb|3NRR|A Chain A, Co-Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Babesia Bovis With Dump, Raltitrexed And Nadp gi|300508798|pdb|3NRR|B Chain B, Co-Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Babesia Bovis With Dump, Raltitrexed And Nadp Length = 515 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 129/282 (45%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+L V+ G + +RTG S FGYQMRFDLS+ FPLLTTKKV +S++ ELLWF Sbjct: 234 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 293 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++G +N + L V IW+ ++ DK+G +LGPIYG QWR + Sbjct: 294 IKGSTNGNDLLAKNVRIWELNGRRDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHA 353 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G IDQ++ I+ ++ +P RR IV +WNV+ + KMALPPCHC FQFYV + KLSC Sbjct: 354 DYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 413 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYS+LT M+A V G GEF+H L D H+Y +H + Q++R Sbjct: 414 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 473 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P P++ +NP+I ++ F +D + Y H I +S Sbjct: 474 IPHPFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMSA 515 >gi|294878205|ref|XP_002768310.1| dihydrofolate reductase-thymidylate synthase, putative [Perkinsus marinus ATCC 50983] gi|239870558|gb|EER01028.1| dihydrofolate reductase-thymidylate synthase, putative [Perkinsus marinus ATCC 50983] Length = 492 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 133/286 (46%), Positives = 181/286 (63%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 ++YL L+ +I+ G D DRTGVGT++ F MRF L G FPLLTTK+V W+ VV ELL Sbjct: 207 YEYLRLIEEIIENGEDADDRTGVGTKTIFSCHMRFSLRDGVFPLLTTKRVFWRGVVEELL 266 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WF+RGD+N +L GV IWD E+ D ++G+LGP+YG QWR + Sbjct: 267 WFIRGDTNAKHLSDQGVKIWDLNGTREFLDGRGLTHREEGDLGPVYGFQWRHFGADYVDM 326 Query: 102 -PDYD-GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK- 158 DY +DQ++ +++ L+ +P RR I++AWN + MALPPCH + QFYV++ + Sbjct: 327 HADYSKSGGVDQLAEVIRQLKENPMDRRIIMTAWNPTALPLMALPPCHMMCQFYVNSKQE 386 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC +YQRS D+ LG+PFNIASY+LLT MLA V G + GEF H LG+ H+YNNH E Sbjct: 387 LSCAMYQRSADMGLGVPFNIASYALLTCMLAQVCGLKPGEFCHHLGNTHVYNNHIEPLRQ 446 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P + INPN+ + + DF L Y P I +++V Sbjct: 447 QLKRTPRPFPLLKINPNVKTIDDIKSSDFELIGYNPWGKIAMEMAV 492 >gi|297798456|ref|XP_002867112.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297312948|gb|EFH43371.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 565 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 129/281 (45%), Positives = 173/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 285 YLNLVKEIISNGNLKGDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 344 Query: 64 RGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------PD 103 G +N L G+ IWD A + +G+LGP+YG QWR + D Sbjct: 345 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 404 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV +G+LSCQ+ Sbjct: 405 YTGQGFDQLLDVIHKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVADGELSCQM 464 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT +LA V G+FIH +GD H+Y NH QL Sbjct: 465 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 524 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + I P D+ SF +DF L Y+PH I K++V Sbjct: 525 PKPFPVLKIKPEKKDIDSFVSDDFELIGYDPHKKIDMKMAV 565 >gi|289466117|gb|ADC94829.1| dihydrofolate reductase-thymidylate synthase [Plasmodium billbrayi] Length = 599 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 126/277 (45%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 318 YQYLNIIYDIIMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 377 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 378 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 437 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 438 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 497 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 498 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAEFIHVLGNAHVYNNHIDSLKIQLN 557 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 558 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 594 >gi|225428412|ref|XP_002280254.1| PREDICTED: similar to Bifunctional dihydrofolate reductase-thymidylate synthase [Vitis vinifera] Length = 524 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 133/281 (47%), Positives = 170/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +I G R DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 244 YLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFI 303 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103 G +N L G+ IWD A +D G+LGPIYG QWR + D Sbjct: 304 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHAD 363 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV +G+LSCQ+ Sbjct: 364 YTGQGFDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQM 423 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT M+A V G+FIH +GD H+Y H QL + Sbjct: 424 YQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKL 483 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP ++ SF DF L Y+PH I K++V Sbjct: 484 PKPFPILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 524 >gi|269860859|ref|XP_002650147.1| thymidylate synthase [Enterocytozoon bieneusi H348] gi|220066420|gb|EED43902.1| thymidylate synthase [Enterocytozoon bieneusi H348] Length = 291 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 134/284 (47%), Positives = 181/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60 HQYL+L++ +++ G DRTG GTRS FG Q+RF L + FPLLTTK+V KS++ ELL Sbjct: 8 HQYLELIKRILRDGIQCNDRTGTGTRSVFGAQLRFSLRNNQFPLLTTKRVAIKSIIGELL 67 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG------ELGPIYGVQWRSW-------- 101 +F+RG +N L + G+ IWD E+ DK G +LGP+YG QWR + Sbjct: 68 FFIRGQTNNKILKQQGIHIWDGNSTREFFDKVGIQREEDDLGPVYGFQWRHFGAHYKTCH 127 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ ++ +P SRR IVSAWN + MALPPCH LFQF V KLSC Sbjct: 128 DDYTGEGVDQLKYVIDEIQKNPESRRIIVSAWNPLCLKDMALPPCHTLFQFRVYGNKLSC 187 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRSGDV LGIPFNIASY+LLT+++A + + EF+HT+GD H+YN+H E + Q++ Sbjct: 188 MLYQRSGDVGLGIPFNIASYALLTIIVAQICNLEPDEFVHTIGDAHIYNDHIEALNKQIT 247 Query: 222 RSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+P P++ + N F EDF L Y H I+ K+SV Sbjct: 248 RTPFPFPKLKLANKEYRKFEDFEIEDFILEDYNHHPGIIMKMSV 291 >gi|126740659|ref|ZP_01756345.1| Thymidylate synthase [Roseobacter sp. SK209-2-6] gi|126718174|gb|EBA14890.1| Thymidylate synthase [Roseobacter sp. SK209-2-6] Length = 325 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 131/293 (44%), Positives = 182/293 (62%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLDL+ V++ G R DRTGVGTRS FG +RFDLS G P+LTTK+V+WK+ + E+L Sbjct: 33 YQYLDLMEQVLEKGDKRVDRTGVGTRSLFGAMLRFDLSDGTAPILTTKRVYWKTAIKEML 92 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L R V IW +W A + GELGP Sbjct: 93 WFLTGGTNIQPLLRDNVRIWSDWPLATYRSETGEEISQEDFEQRILEDDAFATRWGELGP 152 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +++SLR P SRR + WNVA + +MALPPCH ++Q+ Sbjct: 153 VYGKQWRRWMGADGQEHDQITGLIKSLRETPASRRMLFHGWNVAELSEMALPPCHMVYQY 212 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+C L+QRS D+ LG+PFN S L +MLA G + GE + GDVHLY N Sbjct: 213 HVTSDGRLNCLLFQRSVDLLLGMPFNCVGASALQLMLAQQAGLRPGELVWVGGDVHLYLN 272 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q++R PR LPQ+ + + ++ S++ DF++ Y+PH I A+V+V Sbjct: 273 HLDQAREQMAREPRPLPQISLTRHPENIDSYKISDFSVEGYDPHPPIAAEVAV 325 >gi|70952417|ref|XP_745378.1| bifunctional dihydrofolate reductase-thymidylate synthase [Plasmodium chabaudi chabaudi] gi|56525682|emb|CAH78219.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Plasmodium chabaudi chabaudi] Length = 498 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 127/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 216 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLSEYFPLLTTKKLFVRGIIEELLW 275 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 276 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 335 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY +DQ+ +I+ ++ DP RR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 336 ADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 395 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH E +QL+ Sbjct: 396 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHVESLKVQLN 455 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R+P P + +NP I ++ F DFT+++Y H I Sbjct: 456 RTPYPFPTLKLNPEIKNIEDFTISDFTVQNYVHHDKI 492 >gi|118937|sp|P20712|DRTS_PLACH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|160266|gb|AAA29587.1| dihydrofolate reductase/thymidylate synthase [Plasmodium chabaudi] Length = 583 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 127/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 301 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLSEYFPLLTTKKLFVRGIIEELLW 360 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 361 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 420 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY +DQ+ +I+ ++ DP RR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 421 ADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 480 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH E +QL+ Sbjct: 481 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHVESLKVQLN 540 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R+P P + +NP I ++ F DFT+++Y H I Sbjct: 541 RTPYPFPTLKLNPEIKNIEDFTISDFTVQNYVHHDKI 577 >gi|222615976|gb|EEE52108.1| hypothetical protein OsJ_33908 [Oryza sativa Japonica Group] Length = 574 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 127/273 (46%), Positives = 171/273 (62%), Gaps = 20/273 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL+L+ +I+ G+ + DRTG GT S FG QMRF+L FPLLTTKKV W+ VV ELLW Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+ G ++ L G+ IWD E+ D ++G+LGP+YG QWR + Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + + KMALPPCH QFYV++G+LSC Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVESGELSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G GEF+H +GD H+Y H + Q+ Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAHVCGLSPGEFVHVIGDAHVYRTHVRALEEQIQ 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 + P+ P + INP D+ SF DF L P Sbjct: 479 KLPKPFPVLKINPLKKDIDSFVASDFKLVGLSP 511 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 33/59 (55%) Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 ++G GEF+H +GD H+Y H + Q+ + P+ P + INP D+ SF DF L Sbjct: 506 LVGLSPGEFVHVIGDAHVYRTHVRALEEQIQKLPKPFPVLKINPLKKDIDSFVASDFKL 564 >gi|9625888|ref|NP_040136.1| thymidylate synthase [Human herpesvirus 3] gi|136617|sp|P09249|TYSY_VZVD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|259550834|sp|Q4JQW2|TYSY_VZVO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|60002|emb|CAA27896.1| thymidylate synthase [Human herpesvirus 3 strain Dumas] gi|46981424|gb|AAT07695.1| thymidylate synthase [Human herpesvirus 3] gi|46981495|gb|AAT07771.1| thymidylate synthase [Human herpesvirus 3] gi|66865982|gb|AAY57630.1| ORF13 [Human herpesvirus 3] gi|66866054|gb|AAY57701.1| ORF13 [Human herpesvirus 3] gi|83721821|emb|CAI44856.1| thymidylate synthase [Human herpesvirus 3] gi|90992812|gb|ABE03031.1| thymidylate synthase [Human herpesvirus 3] gi|91980314|gb|ABE67121.1| thymidylate synthase [Human herpesvirus 3] gi|94481811|gb|ABF21513.1| thymidylate synthase [Human herpesvirus 3] gi|94481885|gb|ABF21586.1| thymidylate synthase [Human herpesvirus 3] gi|94481959|gb|ABF21659.1| thymidylate synthase [Human herpesvirus 3] gi|94482033|gb|ABF21732.1| thymidylate synthase [Human herpesvirus 3] gi|94482107|gb|ABF21805.1| thymidylate synthase [Human herpesvirus 3] gi|94482181|gb|ABF21878.1| thymidylate synthase [Human herpesvirus 3] gi|94482255|gb|ABF21951.1| thymidylate synthase [Human herpesvirus 3] gi|94482329|gb|ABF22024.1| thymidylate synthase [Human herpesvirus 3] gi|94482403|gb|ABF22097.1| thymidylate synthase [Human herpesvirus 3] gi|94482477|gb|ABF22170.1| thymidylate synthase [Human herpesvirus 3] gi|94482551|gb|ABF22243.1| thymidylate synthase [Human herpesvirus 3] gi|111184746|gb|ABH08454.1| thymidylate synthase [Human herpesvirus 3] gi|157965782|gb|ABW06928.1| thymidylate synthase [Human herpesvirus 3] Length = 301 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 126/282 (44%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + ++++G +RDRTG+GT S FG Q R++L FPLLTTK+V W++VV ELLWF Sbjct: 20 QYLKQVDDILRYGVRKRDRTGIGTLSLFGMQARYNLRNEFPLLTTKRVFWRAVVEELLWF 79 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR----SWPDYDG 106 +RG ++ L + IWD + G+LGPIYG QWR + D Sbjct: 80 IRGSTDSKELAAKDIHIWDIYGSSKFLNRNGFHKRHTGDLGPIYGFQWRHFGAEYKDCQS 139 Query: 107 NV----IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 N IDQ+ +++ +++ +P SRR I+S+WN I M LPPCH L QFYV NG+LSCQ Sbjct: 140 NYLQQGIDQLQTVIDTIKTNPESRRMIISSWNPKDIPLMVLPPCHTLCQFYVANGELSCQ 199 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRSGD+ LG+PFNIA Y+LLT ++A V G + G+ IHT+GD H+Y NH + +QL+R Sbjct: 200 VYQRSGDMGLGVPFNIAGYALLTYIVAHVTGLKTGDLIHTMGDAHIYLNHIDALKVQLAR 259 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 SP+ P + I N+ D+ F+++DF L Y PH + ++++ Sbjct: 260 SPKPFPCLKIIRNVTDINDFKWDDFQLDGYNPHPPLKMEMAL 301 >gi|297744418|emb|CBI37680.3| unnamed protein product [Vitis vinifera] Length = 608 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 133/281 (47%), Positives = 170/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +I G R DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 328 YLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFI 387 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103 G +N L G+ IWD A +D G+LGPIYG QWR + D Sbjct: 388 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHAD 447 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV +G+LSCQ+ Sbjct: 448 YTGQGFDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQM 507 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT M+A V G+FIH +GD H+Y H QL + Sbjct: 508 YQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKL 567 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP ++ SF DF L Y+PH I K++V Sbjct: 568 PKPFPILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 608 >gi|82540717|ref|XP_724655.1| thymidylate synthase [Plasmodium yoelii yoelii str. 17XNL] gi|23479372|gb|EAA16220.1| thymidylate synthase, putative [Plasmodium yoelii yoelii] Length = 588 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 126/277 (45%), Positives = 178/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 306 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLNQYFPLLTTKKLFVRGIIEELLW 365 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 366 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 425 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y +DQ+ +I+ ++ DP RR I+ AWNV +DKMALPPCH L QFYV +GKLSC Sbjct: 426 DNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDKMALPPCHILCQFYVFDGKLSC 485 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH E +QL+ Sbjct: 486 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHIESLKIQLN 545 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R+P P + +NP+I ++ F DFT+++Y H I Sbjct: 546 RTPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKI 582 >gi|302759210|ref|XP_002963028.1| hypothetical protein SELMODRAFT_404548 [Selaginella moellendorffii] gi|300169889|gb|EFJ36491.1| hypothetical protein SELMODRAFT_404548 [Selaginella moellendorffii] Length = 502 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 128/283 (45%), Positives = 177/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +I+ G+ R DRTG GT S FG QMRF+L FPLLTTK+V W+ VV ELLW Sbjct: 220 YQYLNLIKDIIETGNTRSDRTGTGTISKFGCQMRFNLRNSFPLLTTKRVFWRGVVEELLW 279 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+ G +N L G+ IW E+ D ++ +LGP+YG QWR + Sbjct: 280 FISGSTNAKVLEDKGIHIWKGNGSREYLDSIGLSEREENDLGPVYGFQWRHFGARYSTMH 339 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ P RR ++S+WN A + +MALPPCH QFYV NG+LSC Sbjct: 340 DDYTGQGVDQLAEVIDKIKNKPDDRRIVLSSWNPADLKQMALPPCHMFAQFYVSNGELSC 399 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT M+A V G+F+H LGD H+Y NH + QL Sbjct: 400 QMYQRSCDMGLGVPFNIASYALLTCMIAHVCDLAPGDFVHVLGDAHVYTNHVDPLKEQLE 459 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + I + D+ SF +DF L YE H I K+++ Sbjct: 460 NVPKPFPILKIATSNKDIDSFTAKDFQLVDYESHQRIAMKMAL 502 >gi|289466113|gb|ADC94827.1| dihydrofolate reductase-thymidylate synthase [Plasmodium billcollinsi] Length = 607 Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 126/277 (45%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 325 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 384 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ +D +LGPIYG QWR + Sbjct: 385 FIRGETNGNTLLNKNVRIWEANGTRDFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 444 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +IV ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 445 DNYENKGVDQLKNIVDLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 504 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 505 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 564 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 565 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 601 >gi|157135461|ref|XP_001663452.1| bifunctional dihydrofolate reductase-thymidylate synthase [Aedes aegypti] gi|108870229|gb|EAT34454.1| bifunctional dihydrofolate reductase-thymidylate synthase [Aedes aegypti] Length = 313 Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 132/283 (46%), Positives = 175/283 (61%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYL+ ++ +I G R DRTGVGT S FG QMR+ L PLLTTK+V ++ V ELLW Sbjct: 31 QYLEAIQRIIDTGDKRVDRTGVGTLSIFGTQMRYSLRDNVIPLLTTKRVFFRGVAEELLW 90 Query: 62 FLRGDSNVSYLHRHGVSIWDE-----------WADKD-GELGPIYGVQWRSW-------- 101 F+RG +N L V IWD + D+D G+LGP+YG QWR + Sbjct: 91 FIRGSTNAKDLQAKNVHIWDGNSTREFLDASGFTDRDEGDLGPVYGFQWRHFGAKYKTCN 150 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G IDQ++ ++ ++ +P RR I+SAWN I +MALPPCHCL QF+V NG+LSC Sbjct: 151 DDYTGQGIDQLAEVINRIKTNPTDRRIIMSAWNPIDIPQMALPPCHCLAQFFVANGELSC 210 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASY+LLT M+A V G + GEFIHT GD H+Y NH E QL Sbjct: 211 QLYQRSADMGLGVPFNIASYALLTHMMAHVTGLKAGEFIHTTGDTHVYLNHVEPLKEQLQ 270 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + ++ + F DF + Y+P+ I +++V Sbjct: 271 RVPKRFPTLQFKRHVQSIDEFEMGDFEVCGYDPYPTIKMQMAV 313 >gi|2833336|sp|Q27713|DRTS_PLABA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|555825|gb|AAB60237.1| dihydrofolate reductase thymidylate synthase [Plasmodium berghei] Length = 587 Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 125/277 (45%), Positives = 178/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 305 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLNEYFPLLTTKKLFIRGIIEELLW 364 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 365 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 424 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y +DQ+ +I+ ++ DP RR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 425 DNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKNLDQMALPPCHILCQFYVFDGKLSC 484 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH E +QL+ Sbjct: 485 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQAAEFIHVLGNAHVYNNHIESLKIQLN 544 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R+P P + +NP+I ++ F DFT+++Y H I Sbjct: 545 RTPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKI 581 >gi|42685|emb|CAA27600.1| thyA (C-terminal) [Escherichia coli] Length = 202 Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 117/202 (57%), Positives = 152/202 (75%) Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 1 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 60 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 61 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 120 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 121 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 180 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 181 RFEDFEIEGYDPHPGIKAPVAI 202 >gi|223646840|gb|ACN10178.1| Thymidylate synthase [Salmo salar] gi|223672701|gb|ACN12532.1| Thymidylate synthase [Salmo salar] Length = 333 Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 125/281 (44%), Positives = 176/281 (62%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+ ++++ G + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 53 YLNQCEYILQHGHRKGDRTGTGVISVFGSQTRYSLRDQFPLLTTKRVFWKGILEELLWFI 112 Query: 64 RGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PD 103 +G +N L GV IWD ++ DK +G+LGP+YG QWR + D Sbjct: 113 KGSTNAKELTEKGVRIWDANGSRQFLDKMGFTDREEGDLGPVYGFQWRHYGAEYSDMHKD 172 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ +++ +P RR I+ AWN + M LPPCH L QFYV +G+LSCQL Sbjct: 173 YTGQGVDQLQKVIDTIKTNPEDRRIIMCAWNPKDLPHMVLPPCHALCQFYVIDGELSCQL 232 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y+NH E +QL R Sbjct: 233 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYSNHIEPLKVQLQRE 292 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ + + + FR EDF + Y PH I +++V Sbjct: 293 IRPFPKLKLLRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 333 >gi|15227185|ref|NP_179230.1| THY-1 (THYMIDYLATE SYNTHASE 1); dihydrofolate reductase/ thymidylate synthase [Arabidopsis thaliana] gi|21264432|sp|Q05762|DRTS1_ARATH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase 1; Short=DHFR-TS 1; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|4544392|gb|AAD22302.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|17381024|gb|AAL36324.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|21281275|gb|AAM45080.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|330251395|gb|AEC06489.1| thymidylate synthase [Arabidopsis thaliana] Length = 519 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 131/281 (46%), Positives = 171/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 239 YLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 298 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103 G +N L G+ IWD E+ D ++G+LGP+YG QWR + D Sbjct: 299 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 358 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV G+LSCQ+ Sbjct: 359 YTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 418 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT MLA V G+FIH LGD H+Y H QL Sbjct: 419 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYKTHVRPLQEQLLNL 478 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P M INP + SF DF L Y+PH I K++V Sbjct: 479 PKPFPVMKINPEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 519 >gi|170586742|ref|XP_001898138.1| thymidylate synthase [Brugia malayi] gi|158594533|gb|EDP33117.1| thymidylate synthase, putative [Brugia malayi] Length = 306 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 135/283 (47%), Positives = 172/283 (60%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61 +YLD +R+++K G DRTGVGT S FG + L G P+LTTK+V+WK VV ELLW Sbjct: 24 KYLDQVRYILKNGERIDDRTGVGTISVFGMHSVYSLRNGVVPVLTTKRVYWKGVVEELLW 83 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101 F+RGD+N +L GV IWD + +G+LGPIYG QWR Sbjct: 84 FIRGDTNAKHLSEKGVRIWDANGSRQFLDQCGFSDRSEGDLGPIYGFQWRHCGAEYRGMD 143 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY IDQ+S I+ ++ +P+SRR I+SAWNV + MALPPCH L QF V NG+LSC Sbjct: 144 TDYTNQGIDQLSEIIDLIKNEPHSRRIILSAWNVKDLKLMALPPCHTLAQFAVRNGELSC 203 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFN+ASY LLT M+A V G + G H LGD H+Y NH + QL Sbjct: 204 QLYQRSGDMGLGVPFNLASYGLLTHMIAHVCGLKTGHLCHVLGDAHVYMNHVDALQEQLK 263 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + NI + F YE L +Y+P AI ++V Sbjct: 264 RQPRQFPTVRFIGNIKTIDDFTYESIVLENYQPMPAIKMAMAV 306 >gi|15384270|gb|AAK96220.1|AF406808_1 thymidylate synthase [Trichinella spiralis] gi|13096100|gb|AAF80470.2| thymidylate synthase [Trichinella spiralis] gi|316977369|gb|EFV60479.1| thymidylate synthase [Trichinella spiralis] Length = 307 Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 130/283 (45%), Positives = 180/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 YL+ L+ +I G + DRTG+GT STFG Q R+ L FPLLTTK+V W+ VV ELLW Sbjct: 25 NYLNQLKDIIDHGVRKNDRTGIGTLSTFGTQSRYCLRDDIFPLLTTKRVFWRGVVEELLW 84 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+ G +N L V+IWD E+ D ++G+LGP+YG QWR + Sbjct: 85 FISGSTNAKQLSEKNVNIWDGNSSREFLDSRGLYNYEEGDLGPVYGFQWRHFGCPYSSMT 144 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ +R +P SRR I++AWN ++K+ALPPCHC QFYV +G+LSC Sbjct: 145 ADYKGKGYDQLQQCIKMIREEPESRRIIMTAWNPCDLEKVALPPCHCFVQFYVADGELSC 204 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A + + G FIHT+GD H+Y H + +Q+ Sbjct: 205 QMYQRSADMGLGVPFNIASYSLLTRMIAHITSLKPGFFIHTIGDAHVYLTHVDALKVQME 264 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I N+ ++ FR EDF L +Y+P+ I ++V Sbjct: 265 RKPRPFPKLKILRNVENIDDFRAEDFELINYKPYPKISMPMAV 307 >gi|302797080|ref|XP_002980301.1| hypothetical protein SELMODRAFT_233517 [Selaginella moellendorffii] gi|300151917|gb|EFJ18561.1| hypothetical protein SELMODRAFT_233517 [Selaginella moellendorffii] Length = 509 Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 127/283 (44%), Positives = 177/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L FPLLTTK+V W+ VV ELLW Sbjct: 227 YQYLNLIKDIIETGNTKSDRTGTGTISKFGCQMRFNLRNSFPLLTTKRVFWRGVVEELLW 286 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+ G +N L G+ IW E+ D ++ +LGP+YG QWR + Sbjct: 287 FISGSTNAKVLEDKGIHIWKGNGSREYLDSIGLSEREENDLGPVYGFQWRHFGARYSTMH 346 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ P RR ++S+WN A + +MALPPCH QFYV NG+LSC Sbjct: 347 DDYTGQGVDQLAEVIDKIKNKPDDRRIVLSSWNPADLKQMALPPCHMFAQFYVSNGELSC 406 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT M+A V G+F+H LGD H+Y NH + QL Sbjct: 407 QMYQRSCDMGLGVPFNIASYALLTCMIAHVCDLAPGDFVHVLGDAHVYTNHVDPLKEQLE 466 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + I + D+ SF +DF L YE H I K+++ Sbjct: 467 NVPKPFPILKIATSNKDIDSFTAKDFQLVDYESHQRIAMKMAL 509 >gi|297836680|ref|XP_002886222.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis lyrata subsp. lyrata] gi|297332062|gb|EFH62481.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis lyrata subsp. lyrata] Length = 515 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 129/281 (45%), Positives = 171/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 235 YLNMVEDIISNGNAKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 294 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103 G +N L G+ IWD E+ D ++G+LGP+YG QWR + D Sbjct: 295 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 354 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV G+LSCQ+ Sbjct: 355 YTGQGFDQLLDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 414 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT MLA V G+FIH +GD H+Y H QL Sbjct: 415 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVIGDAHVYKTHVRPLQEQLQNP 474 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP + SF DF L Y+PH I K++V Sbjct: 475 PKPFPVLKINPEKKQIDSFVAADFDLTGYDPHKKIEMKMAV 515 >gi|195997697|ref|XP_002108717.1| hypothetical protein TRIADDRAFT_18453 [Trichoplax adhaerens] gi|190589493|gb|EDV29515.1| hypothetical protein TRIADDRAFT_18453 [Trichoplax adhaerens] Length = 317 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 124/284 (43%), Positives = 177/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L++ ++ G+ + DRTG GT+S FG QMRF L PLLTTK+ W+ + ELL Sbjct: 34 YQYLRLIQRIMNEGNFKGDRTGTGTKSIFGAQMRFSLRDNQMPLLTTKRTFWRGIAEELL 93 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW------- 101 WF++G +N + L+ G+ W+ ++ G+LGPIYG QWR + Sbjct: 94 WFVKGSTNANQLNEKGIKFWNANGSREFLDSRGLHEREVGDLGPIYGFQWRHFGAKYTNM 153 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ++ ++ ++ P RR I+SAWN + +MALPPCH QFYV +G+LS Sbjct: 154 HADYTGQGVDQLAEVIHKIKTSPNDRRIILSAWNPPDLPEMALPPCHAFVQFYVCDGRLS 213 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGD+ LG+PFNIASYSLLT M+A + + +F+HT+GD H+Y NHF+ QL Sbjct: 214 CQLYQRSGDMGLGVPFNIASYSLLTHMIAHICDLEAEDFVHTIGDAHVYLNHFDALQEQL 273 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P++ I D+ F+YEDF L+ Y+ H I ++V Sbjct: 274 MREPKKFPKLNFKRKISDIDDFKYEDFELQDYQFHPTIKMDMAV 317 >gi|19481716|gb|AAL88992.1| WSSV124 [shrimp white spot syndrome virus] Length = 289 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 134/279 (48%), Positives = 179/279 (64%), Gaps = 21/279 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60 HQYL+L+R +++ G + DRTG GT S FG QMRF L P+LTTKK+ W+ VV EL Sbjct: 5 HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELS 64 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------- 101 WF+RG+++ L + + IW+ E+ D +G+LGP+YG QWR + Sbjct: 65 WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGFQWRHFGAEYDTC 124 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+++I+++LR +P RR I++AWN + MALPPCH QFYV NG+LS Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGDV LG+PFNIASYSLLT ++AS++G + GEFI TLGD H+YN H E QL Sbjct: 185 CQLYQRSGDVGLGVPFNIASYSLLTHLMASMVGLKPGEFILTLGDAHIYNTHIEVLKKQL 244 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 R PR P++ I + F + F L Y+PH+ L Sbjct: 245 CRVPRPFPKLRILMAPEKIEDFTIDMFYLEGYQPHSGNL 283 >gi|227432568|ref|ZP_03914549.1| thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351676|gb|EEJ41921.1| thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 322 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 135/317 (42%), Positives = 179/317 (56%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL ++++ GS + DRTG GTRS FG QMRF+L++GFPLLTTKKV + + ELLW Sbjct: 6 QQYLDLAQNILDEGSHKGDRTGTGTRSLFGTQMRFNLAEGFPLLTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K Sbjct: 66 FLRGDNNIRFLLEHNNHIWDEWAFKKWIESDKYTGPDMTNFGLRSQTDENFAKIYKEQKD 125 Query: 88 ----------------GELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADPYSRR 127 G +G +YG WRSW +DQ++ ++ ++ P SRR Sbjct: 126 IFVNNILNDDEFKEEFGYIGNVYGKLWRSWETNSLTAGDETVDQVARLIDQIKETPNSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS Q+YQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSLQMYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ GEFIHT+GD H+YNNH +Q QLSR LP++ +NP + L + +D Sbjct: 246 VAAQTGYEVGEFIHTIGDTHIYNNHVDQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + Y+ AI A V+V Sbjct: 306 KILDYDSEPAIKAPVAV 322 >gi|72391754|ref|XP_846171.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei TREU927] gi|62358404|gb|AAX78868.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei] gi|70802707|gb|AAZ12612.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 527 Score = 261 bits (667), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 133/284 (46%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ +I G + DRTGVGTRS FG QMRF L PLLTTK+V W+ V ELL Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++N L G+ IWD + D G +LGP+YG QWR + Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 D +G +DQI++IV+SL +P RR I +AWN A + +MALPPCH + QFYV NG+LS Sbjct: 364 KEDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT ++A G + GE +HTLGD H+Y+NH E QL Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ + L F+ D + Y P+ I +++V Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527 >gi|160264|gb|AAA29586.1| dihydrofolate reductase-thymidylate synthase (EC 1.5.1.3) (EC 2.1.1.45) [Plasmodium falciparum] Length = 608 Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602 >gi|124505475|ref|XP_001351479.1| bifunctional dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum 3D7] gi|1655965|gb|AAC53680.1| dihydrofolate reductase-thymidylate synthase [synthetic construct] gi|23498237|emb|CAD49208.1| bifunctional dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum 3D7] gi|156067086|gb|ABU43153.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|156067088|gb|ABU43154.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|156067090|gb|ABU43155.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|156067092|gb|ABU43156.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|195957246|gb|ACG59401.1| dihydrofolate reductase/thymidylate synthase [Plasmodium falciparum] Length = 608 Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602 >gi|160262|gb|AAA29585.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|623444|gb|AAB59212.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] Length = 608 Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602 >gi|301598514|pdb|3JSU|A Chain A, Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase(Pfdhfr-Ts) Complexed With Qn254, Nadph, And Dump gi|301598515|pdb|3JSU|B Chain B, Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase(Pfdhfr-Ts) Complexed With Qn254, Nadph, And Dump Length = 608 Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602 >gi|289193|gb|AAA32788.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] Length = 519 Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 130/281 (46%), Positives = 171/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 239 YLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 298 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103 G +N L G+ IWD E+ D ++G+LGP+YG QWR + D Sbjct: 299 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 358 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV G+LSCQ+ Sbjct: 359 YTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 418 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT MLA V G+FIH LGD H+Y H QL Sbjct: 419 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYKTHVRPLQEQLLNP 478 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP + SF DF L Y+PH I K++V Sbjct: 479 PKPFPVLKINPEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 519 >gi|118938|sp|P13922|DRTS_PLAFK RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|160260|gb|AAA29580.1| dihydrofolate reductase-thymidylate synthetase [Plasmodium falciparum] gi|195957244|gb|ACG59400.1| dihydrofolate reductase/thymidylate synthase [Plasmodium falciparum] Length = 608 Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602 >gi|156067082|gb|ABU43151.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|156067084|gb|ABU43152.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] Length = 608 Score = 261 bits (667), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602 >gi|116617576|ref|YP_817947.1| thymidylate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272223|sp|Q03YZ8|TYSY_LEUMM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116096423|gb|ABJ61574.1| thymidylate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 322 Score = 261 bits (666), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 135/317 (42%), Positives = 178/317 (56%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + ++ GS + DRTG GTRS FG QMRF+L++GFPLLTTKKV + + ELLW Sbjct: 6 QQYLDLAQKILDEGSHKGDRTGTGTRSLFGTQMRFNLAEGFPLLTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K Sbjct: 66 FLRGDNNIRFLLEHNNHIWDEWAFKKWIESDKYTGPDMTNFGLRSQTDENFAKIYKEQKD 125 Query: 88 ----------------GELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADPYSRR 127 G +G +YG WRSW +DQ++ ++ ++ P SRR Sbjct: 126 IFVNNILNDDEFKEEFGYIGNVYGKLWRSWETNSLTAGDETVDQVARLIDQIKETPNSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS Q+YQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSLQMYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ GEFIHT+GD H+YNNH +Q QLSR LP++ +NP + L + +D Sbjct: 246 VAAQTGYEVGEFIHTIGDTHIYNNHVDQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + Y+ AI A V+V Sbjct: 306 KILDYDSEPAIKAPVAV 322 >gi|2833337|sp|Q27783|DRTS_TRYBB RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|799175|gb|AAA91362.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei] Length = 527 Score = 261 bits (666), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 133/284 (46%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ +I G + DRTGVGTRS FG QMRF L PLLTTK+V W+ V ELL Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSWP------ 102 WFLRG++N L G+ IWD + D G +LGP+YG QWR + Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 D +G +DQI++IV+SL +P RR I +AWN A + +MALPPCH + QFYV NG+LS Sbjct: 364 KVDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT ++A G + GE +HTLGD H+Y+NH E QL Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ + L F+ D + Y P+ I +++V Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527 >gi|156849051|ref|XP_001647406.1| hypothetical protein Kpol_1018p80 [Vanderwaltozyma polyspora DSM 70294] gi|156118092|gb|EDO19548.1| hypothetical protein Kpol_1018p80 [Vanderwaltozyma polyspora DSM 70294] Length = 305 Score = 261 bits (666), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 137/290 (47%), Positives = 180/290 (62%), Gaps = 28/290 (9%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYL+L + +I G DR DRTG GT S F Q+RFDLS FPLLTTKKV K ++ ELL Sbjct: 16 QYLNLCQRIIDEGEDRPDRTGTGTYSIFAPPQLRFDLSGDKFPLLTTKKVFTKGIILELL 75 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WF+ G ++ L GV IW+ E+ D ++G+LGP+YG QWR + Sbjct: 76 WFIAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYKTC 135 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD----- 155 DY G +DQ+ I+ ++ +PY RR I+SAWN KMALPPCH QFYV+ Sbjct: 136 EDDYTGKGVDQLQEIIYKIKNNPYDRRIIMSAWNPPDFPKMALPPCHVFCQFYVNFPKDG 195 Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 KLSC LYQRS D+ LG+PFNIASY+LLT M+A + + GEFIHT+GD H+Y +H E Sbjct: 196 SKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHICDMEAGEFIHTMGDAHVYKDHIE 255 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+SR+PR P++ I +I D+ F++EDF + Y PH I K+SV Sbjct: 256 ALQEQMSRTPREFPKLKIKRDIKDINDFKFEDFEIVDYHPHGKIQMKMSV 305 >gi|261329761|emb|CBH12743.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei gambiense DAL972] Length = 527 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 133/284 (46%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ +I G + DRTGVGTRS FG QMRF L PLLTTK+V W+ V ELL Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSWP------ 102 WFLRG++N L G+ IWD + D G +LGP+YG QWR + Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 D +G +DQI++IV+SL +P RR I +AWN A + +MALPPCH + QFYV NG+LS Sbjct: 364 KVDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT ++A G + GE +HTLGD H+Y+NH E QL Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ + L F+ D + Y P+ I +++V Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527 >gi|260753698|ref|YP_003226591.1| thymidylate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553061|gb|ACV76007.1| thymidylate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 296 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 129/293 (44%), Positives = 179/293 (61%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL L+ +++ G R DRTGVGT S FG MRFDLSKG P+LTTKKV ++ + E+L Sbjct: 4 HQYLRLVSDILEKGDQRHDRTGVGTLSLFGAMMRFDLSKGRIPILTTKKVSYRLAIREML 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL GD+N+ L GVSIW +W A K G+LGP Sbjct: 64 WFLSGDTNIRPLVEQGVSIWSDWPLARYQAETGALLSKKEFEAKILADTEFAKKWGDLGP 123 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG V DQI++++++L+++P SRR + WNVA + MALPPCH ++Q+ Sbjct: 124 VYGRQWRRWQGSDGQVYDQIATLIETLKSNPSSRRMLFHGWNVAELKDMALPPCHMVYQY 183 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS DVFLG+PFN+ + L MLA G G+ + T GDVH+Y N Sbjct: 184 HVTSDGRLNSLLYQRSADVFLGLPFNLVGAAALQAMLADQAGLALGDLVWTGGDVHIYRN 243 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +Q QL+R PRT P++ + + + ++ EDF + Y+PH I V+V Sbjct: 244 HIDQMKEQLAREPRTFPRLELMRHPNSITDYKIEDFAITGYDPHPPIKGAVAV 296 >gi|213511040|ref|NP_001134715.1| Thymidylate synthase [Salmo salar] gi|209735384|gb|ACI68561.1| Thymidylate synthase [Salmo salar] Length = 333 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 125/281 (44%), Positives = 175/281 (62%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+ ++++ G + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 53 YLNQCEYILQHGHRKGDRTGTGVISVFGSQTRYSLRDQFPLLTTKRVFWKGILEELLWFI 112 Query: 64 RGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PD 103 +G +N L GV IWD ++ DK +G+LGP+YG QWR + D Sbjct: 113 KGSTNAKELTEKGVRIWDANGSRQFLDKMGFTDREEGDLGPVYGFQWRHYGAEYSDMRKD 172 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ ++ +P RR I+ AWN + M LPPCH L QFYV +G+LSCQL Sbjct: 173 YTGQGVDQLQKVIDIIKTNPEDRRIIMCAWNPKDLPHMVLPPCHALCQFYVIDGELSCQL 232 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y+NH E +QL R Sbjct: 233 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYSNHIEPLKVQLQRE 292 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ + + + FR EDF + Y PH I +++V Sbjct: 293 IRPFPKLKLLRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 333 >gi|213650267|ref|ZP_03380320.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|323222587|gb|EGA06952.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 202 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 116/202 (57%), Positives = 151/202 (74%) Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 ++GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 1 MQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLKND 60 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 61 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 120 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L + Sbjct: 121 LLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDY 180 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R++DF + Y+PH I A V++ Sbjct: 181 RFDDFEIEGYDPHPGIKAPVAI 202 >gi|115524162|ref|YP_781073.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] gi|115518109|gb|ABJ06093.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] Length = 201 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 114/176 (64%), Positives = 143/176 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL ++ G+++ DRTG GT S FG+QMRF L GFP+LTTK++ K++VHELL Sbjct: 1 MHQYHDLLERILSDGAEKHDRTGTGTLSVFGHQMRFALDAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD +G+LGP+YG QWRSWP DG IDQI+ +V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNGVSIWDEWADANGDLGPVYGAQWRSWPTQDGGSIDQIAGVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 +P SRR IV+AWN A ++KMALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+ F Sbjct: 121 RNPDSRRLIVTAWNPAEVEKMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVGF 176 >gi|241762107|ref|ZP_04760190.1| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|283856542|ref|YP_163490.2| thymidylate synthase [Zymomonas mobilis subsp. mobilis ZM4] gi|59803072|sp|Q9Z671|TYSY_ZYMMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|241373357|gb|EER62957.1| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|283775549|gb|AAV90379.2| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ZM4] Length = 296 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 128/293 (43%), Positives = 178/293 (60%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL L+ +++ G R DRTGVGT S FG MRFDLSKG P+LTTKKV ++ + E+L Sbjct: 4 HQYLRLVSDILEKGDQRHDRTGVGTLSLFGAMMRFDLSKGRIPILTTKKVSYRLAIREML 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL GD+N+ L GVSIW +W A K G+LGP Sbjct: 64 WFLSGDTNIRPLVEQGVSIWSDWPLARYQAETGALLSKKEFEAKILADTEFAKKWGDLGP 123 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG V DQI++++++L+++P SRR + WNVA + MALPPCH ++Q+ Sbjct: 124 VYGRQWRRWQGSDGQVYDQIATLIETLKSNPSSRRMLFHGWNVAELKDMALPPCHMVYQY 183 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS DVFLG+PFN+ + L MLA G G+ + T GDVH+Y N Sbjct: 184 HVTSDGRLNSLLYQRSADVFLGLPFNLVGAAALQAMLADQAGLALGDLVWTGGDVHIYRN 243 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +Q QL+R PR P++ + + + ++ EDF + Y+PH I V+V Sbjct: 244 HIDQMKEQLAREPRAFPRLELTRHPNSITDYKIEDFAITGYDPHPPIKGAVAV 296 >gi|166164553|gb|ABY83775.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 637 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 126/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 355 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 414 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 415 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 474 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 475 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 534 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 535 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 594 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I ++ F DFT+ +Y H I Sbjct: 595 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 631 >gi|259149556|emb|CAY86360.1| Cdc21p [Saccharomyces cerevisiae EC1118] gi|323302856|gb|EGA56660.1| Cdc21p [Saccharomyces cerevisiae FostersB] gi|323307154|gb|EGA60437.1| Cdc21p [Saccharomyces cerevisiae FostersO] Length = 304 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 141/294 (47%), Positives = 180/294 (61%), Gaps = 31/294 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59 QYLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV + ++ EL Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------ 101 LWFL GD++ + L GV IWD E+ DK G +LGP+YG QWR + Sbjct: 71 LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G IDQ+ ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190 Query: 156 ---NGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 +GK LSC LYQRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + Q+SR+PR P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 251 DHIDALKEQISRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304 >gi|289466109|gb|ADC94825.1| dihydrofolate reductase-thymidylate synthase [Plasmodium reichenowi] Length = 598 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 317 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 376 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 377 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 436 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 437 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 496 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 497 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 556 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 557 RIPYPFPTLKLNPDIKNIEDFTILDFTIQNYVHHEKI 593 >gi|178847032|pdb|2H2Q|A Chain A, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase gi|178847033|pdb|2H2Q|B Chain B, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase gi|219689203|pdb|3CL9|A Chain A, Structure Of Bifunctional Tcdhfr-Ts In Complex With Mtx gi|219689204|pdb|3CLB|A Chain A, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq gi|219689205|pdb|3CLB|B Chain B, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq gi|219689206|pdb|3CLB|C Chain C, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq gi|219689207|pdb|3CLB|D Chain D, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq gi|237824093|pdb|3HBB|A Chain A, Structures Of Dihydrofolate Reductase-Thymidylate Synthase Of Trypanosoma Cruzi In The Folate-Free State And In Complex With Two Antifolate Drugs, Trimetrexate And Methotrexate gi|237824094|pdb|3HBB|B Chain B, Structures Of Dihydrofolate Reductase-Thymidylate Synthase Of Trypanosoma Cruzi In The Folate-Free State And In Complex With Two Antifolate Drugs, Trimetrexate And Methotrexate gi|237824095|pdb|3HBB|C Chain C, Structures Of Dihydrofolate Reductase-Thymidylate Synthase Of Trypanosoma Cruzi In The Folate-Free State And In Complex With Two Antifolate Drugs, Trimetrexate And Methotrexate gi|237824096|pdb|3HBB|D Chain D, Structures Of Dihydrofolate Reductase-Thymidylate Synthase Of Trypanosoma Cruzi In The Folate-Free State And In Complex With Two Antifolate Drugs, Trimetrexate And Methotrexate gi|297787629|pdb|3KJS|A Chain A, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity D Inhibitors: Dq1 Inhibitor Complex gi|297787630|pdb|3KJS|B Chain B, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity D Inhibitors: Dq1 Inhibitor Complex gi|297787631|pdb|3KJS|C Chain C, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity D Inhibitors: Dq1 Inhibitor Complex gi|297787632|pdb|3KJS|D Chain D, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity D Inhibitors: Dq1 Inhibitor Complex gi|20270967|gb|AAM18488.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|322825519|gb|EFZ30453.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma cruzi] Length = 521 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 131/284 (46%), Positives = 176/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ L + D + Y P+ I K++V Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521 >gi|146231201|gb|ABQ12770.1| unknown [Shrimp white spot syndrome virus] Length = 289 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 134/279 (48%), Positives = 178/279 (63%), Gaps = 21/279 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60 HQYL+L+R +++ G + DRTG GT S FG QMRF L P+LTTKK+ W+ VV ELL Sbjct: 5 HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELL 64 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------- 101 WF+RG+++ L + + IW+ E+ D +G+LGP+YG QWR + Sbjct: 65 WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGSQWRHFGAEYDTC 124 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+++I+++LR +P RR I++AWN + MALPPCH QFYV NG+LS Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGDV LG+P NIASYSLLT ++AS+ G + GEFI TLGD H+YN H E QL Sbjct: 185 CQLYQRSGDVGLGVPSNIASYSLLTHLMASMAGLKPGEFILTLGDAHIYNTHIEVLKKQL 244 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 R PR P++ I + F + F L Y+PH+ L Sbjct: 245 CRVPRPFPKLRILMAPKKIEDFTIDMFYLEGYQPHSGNL 283 >gi|20270965|gb|AAM18487.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 521 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 129/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ L + D + Y P+ I K++V Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521 >gi|71653378|ref|XP_815327.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi strain CL Brener] gi|2833338|sp|Q27793|DRTS_TRYCR RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|301598498|pdb|3INV|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph, Dump And C-448 Antifolate gi|301598499|pdb|3INV|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph, Dump And C-448 Antifolate gi|301598500|pdb|3IRM|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Cycloguanil gi|301598501|pdb|3IRM|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Cycloguanil gi|301598502|pdb|3IRM|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Cycloguanil gi|301598503|pdb|3IRM|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Cycloguanil gi|301598504|pdb|3IRN|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Cycloguanil gi|301598505|pdb|3IRN|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Cycloguanil gi|301598506|pdb|3IRN|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Cycloguanil gi|301598507|pdb|3IRN|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Cycloguanil gi|301598508|pdb|3IRO|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Q-8 Antifolate gi|301598509|pdb|3IRO|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Q-8 Antifolate gi|301598510|pdb|3IRO|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Q-8 Antifolate gi|301598511|pdb|3IRO|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Q-8 Antifolate gi|1899001|gb|AAB49898.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|70880375|gb|EAN93476.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma cruzi] Length = 521 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 131/284 (46%), Positives = 176/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ L + D + Y P+ I K++V Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521 >gi|323331459|gb|EGA72874.1| Cdc21p [Saccharomyces cerevisiae AWRI796] Length = 302 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 140/294 (47%), Positives = 180/294 (61%), Gaps = 31/294 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59 QYLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV + ++ EL Sbjct: 9 EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 68 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------ 101 LWFL GD++ + L GV IWD E+ DK G +LGP+YG QWR + Sbjct: 69 LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 128 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G IDQ+ ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV Sbjct: 129 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 188 Query: 156 ---NGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 +GK LSC LYQRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y Sbjct: 189 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 248 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + Q++R+PR P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 249 DHIDALKEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 302 >gi|294441237|gb|ADE75020.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 639 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 125/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I ++ F DFT+ +Y H I Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 633 >gi|83578104|ref|NP_014717.2| Cdc21p [Saccharomyces cerevisiae S288c] gi|136618|sp|P06785|TYSY_YEAST RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName: Full=Cell division cycle protein 21; AltName: Full=Constitutive RNR3 transcription protein 9 gi|172990|gb|AAA60940.1| thymidylate synthase [Saccharomyces cerevisiae] gi|2104886|emb|CAA94559.1| YOR29-25 [Saccharomyces cerevisiae] gi|190407409|gb|EDV10676.1| thymidylate synthase [Saccharomyces cerevisiae RM11-1a] gi|256270905|gb|EEU06037.1| Cdc21p [Saccharomyces cerevisiae JAY291] gi|285814960|tpg|DAA10853.1| TPA: Cdc21p [Saccharomyces cerevisiae S288c] gi|323352068|gb|EGA84605.1| Cdc21p [Saccharomyces cerevisiae VL3] Length = 304 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 140/294 (47%), Positives = 180/294 (61%), Gaps = 31/294 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59 QYLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV + ++ EL Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------ 101 LWFL GD++ + L GV IWD E+ DK G +LGP+YG QWR + Sbjct: 71 LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G IDQ+ ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190 Query: 156 ---NGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 +GK LSC LYQRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + Q++R+PR P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 251 DHIDALKEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304 >gi|166164563|gb|ABY83780.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 620 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 125/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 619 >gi|166164543|gb|ABY83770.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] gi|166164545|gb|ABY83771.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 639 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 125/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I ++ F DFT+ +Y H I Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 633 >gi|15809582|gb|AAK55761.1| dihydrofolate reductase/thymidylate synthase [Plasmodium gallinaceum] Length = 589 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 127/277 (45%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ VI G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 307 YQYLNIIYDVIMNGNKQGDRTGVGVVSKFGYMMKFNLNQYFPLLTTKKLFIRGIIEELLW 366 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADKD-------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ E+ DK +LGPIYG QWR + Sbjct: 367 FIRGETNGNTLLNKNVRIWEANGTREFLDKRKLFDREVNDLGPIYGFQWRHFGAEYTNMH 426 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFYV + KLSC Sbjct: 427 DNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYVFDNKLSC 486 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + QL+ Sbjct: 487 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKKQLN 546 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F+ DFT+ +Y H I Sbjct: 547 RIPYPFPTLKLNPDIKNIEDFKVSDFTIENYVHHDKI 583 >gi|166164547|gb|ABY83772.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] gi|294441239|gb|ADE75021.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 639 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 125/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I ++ F DFT+ +Y H I Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 633 >gi|109706879|gb|ABG43014.1| thymidilate synthase [Candida glabrata] gi|109706881|gb|ABG43015.1| thymidilate synthase [Candida glabrata] gi|109706883|gb|ABG43016.1| thymidilate synthase [Candida glabrata] Length = 298 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 139/289 (48%), Positives = 179/289 (61%), Gaps = 27/289 (9%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL +IK G R DRTG GT S F Q+RF L FPLLTTKKV K ++ ELL Sbjct: 10 QYLDLCERIIKEGEFRPDRTGTGTYSLFAPPQLRFSLKDDTFPLLTTKKVFTKGIILELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------- 101 WF+ G ++ L GV IW+ E+ DK +G+LGP+YG QWR + Sbjct: 70 WFIAGCTDAKKLSDQGVKIWEGNGSREYLDKMGFVDRREGDLGPVYGFQWRHFGAEYKTC 129 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---NG 157 DY G +DQ+ ++ L+ +PY RR I+SAWN KMALPPCH QFYV+ +G Sbjct: 130 EDDYTGQGVDQLKEVIHKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFSQFYVNFPKDG 189 Query: 158 K--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 K LSC LYQRS D+ LG+PFNIASY+LLT M+A V + GEFIHTLGD H+Y +H + Sbjct: 190 KPQLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVCDMEPGEFIHTLGDAHVYKDHVDA 249 Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+SR+PR P++ IN + D+ F++EDF L Y+PH I +SV Sbjct: 250 LKEQISRTPRDFPKLRINRKVSDIDDFKFEDFVLEEYDPHPRIQMNMSV 298 >gi|166164549|gb|ABY83773.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 641 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 125/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 359 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 418 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 419 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 478 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 479 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 538 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 539 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 598 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I ++ F DFT+ +Y H I Sbjct: 599 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 635 >gi|166164557|gb|ABY83777.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 620 Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 125/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREANDLGPIYGFQWRHFGAEYTNMY 465 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLT 585 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 586 RIPYPFPTLKLNPEIKNVEDFTISDFTIENYVHH 619 >gi|66356564|ref|XP_625460.1| dihydrofolate reductase-thymidylate synthase [Cryptosporidium parvum Iowa II] gi|46226446|gb|EAK87446.1| dihydrofolate reductase-thymidylate synthase [Cryptosporidium parvum Iowa II] Length = 531 Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 129/283 (45%), Positives = 182/283 (64%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV +S+ EL+WF Sbjct: 249 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 308 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++GD+N ++L V IW E+ ++ G +LGPIYG QWR + Sbjct: 309 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 368 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 369 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 428 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 429 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 488 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I +++V Sbjct: 489 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMEMAV 531 >gi|166164555|gb|ABY83776.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 620 Score = 258 bits (660), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 125/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 619 >gi|145567020|gb|ABP81860.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] Length = 621 Score = 258 bits (660), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 459 ANYENKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I ++ F DFT+++Y H I Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKI 615 >gi|255724850|ref|XP_002547354.1| thymidylate synthase [Candida tropicalis MYA-3404] gi|240135245|gb|EER34799.1| thymidylate synthase [Candida tropicalis MYA-3404] Length = 303 Score = 258 bits (660), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 139/292 (47%), Positives = 179/292 (61%), Gaps = 31/292 (10%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 YLDL +IK G R DRTG GT+S F Q+RFDLS FPLLTTKKV K ++HELLW Sbjct: 12 YLDLCERIIKEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ G ++ L GV IW+ E+ DK +G+LGP+YG QWR + Sbjct: 72 FIAGSTDAKILTNKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKDCD 131 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-----N 156 DY G DQ+ I++ L+ +PY RR I+SAWN DKMALPPCH QFYV+ Sbjct: 132 ADYTGQGYDQLQDIIKKLKTNPYDRRIIMSAWNPPDFDKMALPPCHVFCQFYVNFPENAK 191 Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+ GEFIHT+GD H+Y +H + Sbjct: 192 PKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTMGDAHVYLDHVDAL 251 Query: 217 DLQLSRSPRTLPQMIINPNIVDLLS----FRYEDFTLRSYEPHAAILAKVSV 264 QL R P+ P+++I + D + F +EDF + YEP+ I K+SV Sbjct: 252 KEQLERIPKQFPKLVIKEDRKDEIKSIDDFEFEDFQIVGYEPYPPIKMKMSV 303 >gi|156345471|ref|XP_001621374.1| hypothetical protein NEMVEDRAFT_v1g145132 [Nematostella vectensis] gi|156207232|gb|EDO29274.1| predicted protein [Nematostella vectensis] Length = 210 Score = 258 bits (659), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 120/210 (57%), Positives = 152/210 (72%) Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 ++ ELLWFLRGDSNV +L G +IW+EWA +DG+LGP+YGVQWR+WP DG IDQI+ Sbjct: 1 IILELLWFLRGDSNVRWLQERGCTIWNEWAREDGDLGPVYGVQWRNWPTPDGGHIDQIAE 60 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 +V+ L+++P SRR IVSAWNVA + +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+ Sbjct: 61 VVKQLKSNPDSRRIIVSAWNVADLPQMALMPCHAFFQFYVADGKLSCQLYQRSADIFLGV 120 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT MLA Q G+F+ T GD H+YNNHF Q + QL+R P P + I Sbjct: 121 PFNIASYALLTHMLAQQCDLQVGDFVWTGGDCHIYNNHFAQVETQLARQPFAYPTLQIKR 180 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + Y+ H I A V+V Sbjct: 181 RPDSIFGYEYEDFEVVGYQHHEPIKAPVAV 210 >gi|225717296|gb|ACO14494.1| Thymidylate synthase [Esox lucius] Length = 319 Score = 258 bits (659), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 125/281 (44%), Positives = 173/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+ ++++ G + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 39 YLNQCEYILQHGHRKGDRTGTGVISVFGSQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103 +G +N L GV IWD +D G+LGP+YG QW + D Sbjct: 99 KGSTNAKGLSEKGVKIWDANGSRDFLDKMGFTDREEGDLGPVYGFQWWHFGAEYSNMHTD 158 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ +++ +++ +P RR I+ AWN + MALPPCH L QFYV +G+LSCQL Sbjct: 159 YTGKGVDQLQNVIDTIKTNPEDRRIIMCAWNPKDLPHMALPPCHALCQFYVIDGELSCQL 218 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R Sbjct: 219 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYINHVEPLKVQLQRE 278 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ I + + FR EDF + Y PH I +++V Sbjct: 279 IRPFPKLKILRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 319 >gi|296422006|ref|XP_002840554.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636772|emb|CAZ84745.1| unnamed protein product [Tuber melanosporum] Length = 306 Score = 258 bits (659), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 134/291 (46%), Positives = 184/291 (63%), Gaps = 28/291 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-GFPLLTTKKVHWKSVVHEL 59 +QYLDL+R+++ G R DRTG GT S F Q+RF+L FPLLTTK++ K+++HEL Sbjct: 16 YQYLDLVRNILTNGEHRPDRTGTGTISLFAPPQLRFNLKNHTFPLLTTKRLFHKAILHEL 75 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------ 101 LWF+ G ++ + L GV IW+ + +G+LGP+YG QWR + Sbjct: 76 LWFISGSTSNAPLSAVGVKIWEGNGSRAYLDSIGLTERAEGDLGPVYGFQWRHFGAKYVD 135 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ++ ++ L+ +PY RR I+SAWN A + KMALPPCH QFYV Sbjct: 136 CHTDYSGQGVDQLADVIYKLKNNPYDRRIIMSAWNPADLAKMALPPCHMFAQFYVSYKEG 195 Query: 156 --NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 G LSC LYQRS D+ LG+PFNIASY+LLT+M+A V G + GEFIHT+GD H+Y +H Sbjct: 196 KGMGALSCVLYQRSCDMGLGVPFNIASYALLTIMIAHVCGLEPGEFIHTMGDAHVYADHA 255 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + QL R+PR P + IN + D+ F++EDF L Y+PH +I +SV Sbjct: 256 DALKGQLERAPREFPTLKINRQVDDIDDFKFEDFELVGYDPHPSIKMNMSV 306 >gi|323335494|gb|EGA76779.1| Cdc21p [Saccharomyces cerevisiae Vin13] gi|323346516|gb|EGA80803.1| Cdc21p [Saccharomyces cerevisiae Lalvin QA23] Length = 304 Score = 258 bits (659), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 140/294 (47%), Positives = 179/294 (60%), Gaps = 31/294 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59 QYLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV + ++ EL Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------ 101 LWFL GD++ + L GV IWD E+ DK G +LGP+YG QWR + Sbjct: 71 LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G IDQ+ ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190 Query: 156 ---NGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 +GK LSC LYQRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + Q+ R+PR P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 251 DHIDALKEQIXRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304 >gi|145567024|gb|ABP81862.1| dihydrofolate reductase-thymidylate synthase [Plasmodium brasilianum] Length = 621 Score = 258 bits (658), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I ++ F DFT+++Y H I Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKI 615 >gi|136615|sp|P13100|TYSY_PNECA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|7767148|pdb|1CI7|A Chain A, Ternary Complex Of Thymidylate Synthase From Pneumocystis Carinii gi|7767149|pdb|1CI7|B Chain B, Ternary Complex Of Thymidylate Synthase From Pneumocystis Carinii gi|14488434|pdb|1F28|A Chain A, Crystal Structure Of Thymidylate Synthase From Pneumocystis Carinii Bound To Dump And Bw1843u89 gi|14488435|pdb|1F28|B Chain B, Crystal Structure Of Thymidylate Synthase From Pneumocystis Carinii Bound To Dump And Bw1843u89 gi|14488436|pdb|1F28|C Chain C, Crystal Structure Of Thymidylate Synthase From Pneumocystis Carinii Bound To Dump And Bw1843u89 gi|14488437|pdb|1F28|D Chain D, Crystal Structure Of Thymidylate Synthase From Pneumocystis Carinii Bound To Dump And Bw1843u89 gi|169430|gb|AAA33802.1| thymidylate synthase [Pneumocystis carinii] Length = 297 Score = 258 bits (658), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 133/291 (45%), Positives = 185/291 (63%), Gaps = 28/291 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDL-SKGFPLLTTKKVHWKSVVHEL 59 QYL+L++++I G DR DRTG GT S F ++F L +K FPLLTTK+V + V+ EL Sbjct: 7 QQYLNLVQYIINHGEDRPDRTGTGTLSVFAPSPLKFSLRNKTFPLLTTKRVFIRGVIEEL 66 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101 LWF+RG+++ L + IWD E+ D ++G+LGPIYG QWR + Sbjct: 67 LWFIRGETDSLKLREKNIHIWDANGSREYLDSIGLTKRQEGDLGPIYGFQWRHFGAEYID 126 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 +Y G +DQ+++I+Q +R PY RR I+SAWN A ++KMALPPCH QFYV Sbjct: 127 CKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALPPCHMFCQFYVHIPSN 186 Query: 156 --NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 +LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G+FIH +GD H+Y +H Sbjct: 187 NHRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVMGDCHIYKDHI 246 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL+RSPR P + +N +I D+ F +DF +++Y P+ I K+S+ Sbjct: 247 EALQQQLTRSPRPFPTLSLNRSITDIEDFTLDDFNIQNYHPYETIKMKMSI 297 >gi|30749344|pdb|1J3I|C Chain C, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump gi|30749345|pdb|1J3I|D Chain D, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump gi|30749348|pdb|1J3J|C Chain C, Double Mutant (C59r+s108n) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Pyrimethamine, Nadph, And Dump gi|30749349|pdb|1J3J|D Chain D, Double Mutant (C59r+s108n) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Pyrimethamine, Nadph, And Dump gi|30749352|pdb|1J3K|C Chain C, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump gi|30749353|pdb|1J3K|D Chain D, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump gi|222143068|pdb|3DG8|C Chain C, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Rjf670, Nadph, And Dump gi|222143069|pdb|3DG8|D Chain D, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Rjf670, Nadph, And Dump gi|222143072|pdb|3DGA|C Chain C, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Rjf01302, Nadph, And Dump gi|222143073|pdb|3DGA|D Chain D, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Rjf01302, Nadph, And Dump Length = 328 Score = 258 bits (658), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 46 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 105 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 106 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 165 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 166 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 225 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 226 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 285 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 286 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 322 >gi|115299508|gb|ABI93724.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] Length = 369 Score = 258 bits (658), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 131/266 (49%), Positives = 170/266 (63%), Gaps = 21/266 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLD++R ++K G + DRTGVGT S FG MRF+L++ FPLLTTKKV ++ VV ELLW Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGVVEELLW 163 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101 FLRGD+N L GV IW+ E+ D G +LGP+YG QWR + Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY+ +DQ+ ++Q L+ +P SRR I+SAWN + + +MALPPCH + QF+V NGKLSC Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQMALPPCHVMSQFFVANGKLSC 283 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D LGIPFNIASY+LLT MLA GEF+H LGD H+Y+NH + Q+ Sbjct: 284 MMYQRSCDFGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDF 247 R P P + I L + YEDF Sbjct: 344 RVPYPFPILKIKSK-KSLFDYTYEDF 368 >gi|225458199|ref|XP_002281129.1| PREDICTED: similar to Bifunctional dihydrofolate reductase-thymidylate synthase [Vitis vinifera] Length = 580 Score = 258 bits (658), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 130/281 (46%), Positives = 171/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +I G+ + D+TG GT S FG QMRF+L FPLLTTK+V W+ VV ELLWF+ Sbjct: 300 YLRQLKEIISSGAHKADKTGTGTVSKFGCQMRFNLRLSFPLLTTKRVFWRGVVEELLWFI 359 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103 G +N L + + IWD E+ D ++G+LGPIYG QWR + D Sbjct: 360 SGSTNAKVLQKKDIHIWDGNASREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTNMHAD 419 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ P RR I+S+WN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 420 YMGKGFDQLLDVIDKIKNKPDDRRIILSSWNPSDLKLMALPPCHMFAQFYVANGELSCQM 479 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT M+A V G G+FI +GD H+Y H + QL + Sbjct: 480 YQRSADMGLGVPFNIASYALLTCMIAHVCGILPGDFILIIGDAHIYKTHIRPLEEQLQKL 539 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP D+ SF DF L Y PH I K+SV Sbjct: 540 PKPFPILKINPQKKDIESFVAADFELIGYNPHQKIEMKMSV 580 >gi|255543751|ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Ricinus communis] gi|223547949|gb|EEF49441.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Ricinus communis] Length = 528 Score = 258 bits (658), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 130/281 (46%), Positives = 170/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L++ +I G + DRTG GT S FG Q+RF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 248 YLRLVQEIISDGILKDDRTGTGTLSKFGCQVRFNLRKTFPLLTTKKVFWRGVVEELLWFI 307 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103 G +N L G+ IWD A +D G+LGP+YG QWR + D Sbjct: 308 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKNREEGDLGPVYGFQWRHFGARYTDMHAD 367 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ +V ++ +P RR I+SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 368 YTGQGFDQLLDVVNKIKNNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 427 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY LLT ++A V G+F+H +GD H+Y H QL + Sbjct: 428 YQRSADMGLGVPFNIASYGLLTCIIAHVCDLVPGDFVHVIGDTHVYRTHVRPLQEQLQKL 487 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP ++ SF DF L Y+PH I K++V Sbjct: 488 PKPFPILKINPEKKNIDSFVAADFKLIGYDPHHKIEMKMAV 528 >gi|62240520|gb|AAX77434.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] gi|62240522|gb|AAX77435.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] gi|145700343|gb|ABP94173.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] gi|145700345|gb|ABP94174.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] gi|145700347|gb|ABP94175.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] Length = 621 Score = 258 bits (658), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I ++ F DFT+++Y H I Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKI 615 >gi|297342898|pdb|3HJ3|A Chain A, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site Mut gi|297342899|pdb|3HJ3|B Chain B, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site Mut gi|297342900|pdb|3HJ3|C Chain C, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site Mut gi|297342901|pdb|3HJ3|D Chain D, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site Mut Length = 521 Score = 258 bits (658), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 129/283 (45%), Positives = 181/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV +S+ EL+WF Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++GD+N ++L V IW E+ ++ G +LGPIYG QWR + Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I ++V Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521 >gi|67594753|ref|XP_665866.1| chain A, crystal structure of Dhfr [Cryptosporidium hominis TU502] gi|39654756|pdb|1QZF|A Chain A, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis gi|39654757|pdb|1QZF|B Chain B, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis gi|39654758|pdb|1QZF|C Chain C, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis gi|39654759|pdb|1QZF|D Chain D, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis gi|39654760|pdb|1QZF|E Chain E, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis gi|49258971|pdb|1SEJ|A Chain A, Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Cryptosporidium Hominis Bound To 1843u89NADPHDUMP gi|49258972|pdb|1SEJ|B Chain B, Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Cryptosporidium Hominis Bound To 1843u89NADPHDUMP gi|49258973|pdb|1SEJ|C Chain C, Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Cryptosporidium Hominis Bound To 1843u89NADPHDUMP gi|49258974|pdb|1SEJ|D Chain D, Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Cryptosporidium Hominis Bound To 1843u89NADPHDUMP gi|49258975|pdb|1SEJ|E Chain E, Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Cryptosporidium Hominis Bound To 1843u89NADPHDUMP gi|1480451|gb|AAC47230.1| bifunctional dihydrofolate reductase-thymidylate synthase [Cryptosporidium parvum] gi|54656722|gb|EAL35637.1| chain A, crystal structure of Dhfr [Cryptosporidium hominis] Length = 521 Score = 258 bits (658), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 129/283 (45%), Positives = 181/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV +S+ EL+WF Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++GD+N ++L V IW E+ ++ G +LGPIYG QWR + Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I ++V Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521 >gi|22788864|ref|NP_690528.1| thymidylate synthase [Heliothis zea virus 1] gi|20452159|gb|AAM22072.1|AF264019_1 thymidylate synthase [Heliothis zea virus 1] Length = 291 Score = 257 bits (657), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 126/284 (44%), Positives = 176/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60 HQYL+ +R +I+ G+ R DRT VGT S FG R+ L PLLTTK V K V+ ELL Sbjct: 8 HQYLNTIRSIIETGNRRMDRTKVGTLSHFGVMHRYSLRDNSLPLLTTKTVFVKGVIEELL 67 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR--------S 100 W + G +N L R GV IW + + +G+LGP+YG QWR Sbjct: 68 WMISGSTNAKELSRKGVHIWSGNSSRSVLDSLGFTDRQEGDLGPVYGFQWRHSGTKYVDC 127 Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+ +I+ +L+ +P RR ++ +WN A + +MALPPCHCL QFY +GKLS Sbjct: 128 ETDYSGQGVDQLQTIIDTLKTNPTDRRIVMCSWNPADLHQMALPPCHCLAQFYSYDGKLS 187 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C +YQRS D+ LG+PFNIASYS+LT M+A + G + EF+HT+GD H+Y NH E +QL Sbjct: 188 CLMYQRSADMGLGVPFNIASYSMLTHMIAHITGLKAHEFVHTIGDAHVYLNHIEPLKVQL 247 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ + ++ SF+YEDF ++ Y+P+ I ++V Sbjct: 248 EREPRPFPKLEFARKVENIDSFKYEDFIIKGYDPYPKIPMVLAV 291 >gi|326692446|ref|ZP_08229451.1| thymidylate synthase [Leuconostoc argentinum KCTC 3773] Length = 322 Score = 257 bits (657), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 133/317 (41%), Positives = 179/317 (56%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + ++ G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV + + ELLW Sbjct: 6 QQYLDLAQKILAEGNLKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 66 FLRGDNNIRFLLQHNNHIWDEWAFKNWVESNDYTGPDMTNFGHRAETDSEFAAVYQAQKA 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADPYSRR 127 +K G +G +YG WR W +DQ++ +V+ ++ P SRR Sbjct: 126 IFVDKILNDDAFMEKFGYVGDVYGKLWRGWETSSVTAGTETVDQVARLVEEIKTTPDSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNADTTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ G+F+HT+GD H+YNNH +Q QLSR LP++ +NP++ + + +D Sbjct: 246 MAAQTGYEVGDFVHTIGDTHIYNNHVDQITEQLSRPMHPLPKLWLNPDVKSIFDYTMDDI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + YE A I A V+V Sbjct: 306 KVLDYESEAPIKAPVAV 322 >gi|166164569|gb|ABY83783.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 124/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVREIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621 >gi|166164559|gb|ABY83778.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 620 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 125/274 (45%), Positives = 175/274 (63%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 466 DNYDNKGIDQLKNIINLIKNGPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 619 >gi|84996883|ref|XP_953163.1| bifunctional dihydrofolate reductase/thymidilate synthase [Theileria annulata strain Ankara] gi|65304159|emb|CAI76538.1| bifunctional dihydrofolate reductase/thymidilate synthase, putative [Theileria annulata] Length = 523 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 123/281 (43%), Positives = 179/281 (63%), Gaps = 20/281 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL++L ++ G +++RTGV + FGYQMRFDLS+ FPLLTTKKV + ++ EL+WF Sbjct: 242 QYLEILADILNNGYHKKNRTGVDCIAKFGYQMRFDLSQSFPLLTTKKVFLRGIIEELIWF 301 Query: 63 LRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSW--------P 102 +RG +N + L + V IW+ + ++ +LGP+YG QWR + Sbjct: 302 IRGSTNGNELLKKNVRIWELNGARSFLDNLGFYDREEQDLGPVYGFQWRHFGAKYIDMHA 361 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY IDQ+S +++ ++ +P +RR IV +WNVA + KMALPPCH LFQF+V +G LSC Sbjct: 362 DYTDQGIDQLSLVIERIKNNPDNRRLIVCSWNVADLSKMALPPCHLLFQFFVADGTLSCM 421 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYSLLT M+A + G + GEF+H LGD H+YNNH + Q+SR Sbjct: 422 MHQRSCDMGLGVPFNIASYSLLTYMIAHICGLKPGEFVHNLGDAHIYNNHIDAIKEQISR 481 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P P + +N I + F +D + +Y H I +++ Sbjct: 482 VPYPFPTLKLNKEITRIEDFTIDDIKVENYRCHPLIKMEMA 522 >gi|197107400|pdb|3DL5|A Chain A, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|197107401|pdb|3DL5|B Chain B, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|197107402|pdb|3DL5|C Chain C, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|197107403|pdb|3DL5|D Chain D, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|197107404|pdb|3DL5|E Chain E, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis Length = 521 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 129/283 (45%), Positives = 181/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV +S+ EL+WF Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVFIRSIFEELIWF 298 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++GD+N ++L V IW E+ ++ G +LGPIYG QWR + Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I ++V Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521 >gi|166164577|gb|ABY83787.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 124/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621 >gi|71028992|ref|XP_764139.1| dihydrofolate reductase-thymidylate synthase [Theileria parva strain Muguga] gi|68351093|gb|EAN31856.1| dihydrofolate reductase-thymidylate synthase, putative [Theileria parva] Length = 522 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL++L ++ G +++RTGV + FGYQMRFDLS+ FPLLTTKKV + ++ EL+WF Sbjct: 241 QYLEILADILNTGYHKKNRTGVDCIAKFGYQMRFDLSESFPLLTTKKVFLRGIIEELIWF 300 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++G +N + L + V IW+ + D G +LGP+YG QWR + Sbjct: 301 IKGSTNGNELLKKNVRIWELNGARSFLDNLGFFDREEHDLGPVYGFQWRHFGAKYVDMHT 360 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY IDQ+S ++ ++ +P +RR IV +WNVA + KMALPPCH LFQF+V +G LSC Sbjct: 361 DYSNQGIDQLSLVIDRIKNNPDNRRLIVCSWNVADLSKMALPPCHLLFQFFVADGTLSCM 420 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYSLLT M+A + G + GEF+H LGD H+YNNH + Q+SR Sbjct: 421 MHQRSCDMGLGVPFNIASYSLLTYMIAQICGLKPGEFVHNLGDAHIYNNHIDAIKEQISR 480 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P P + +N +I + F +D + +Y H I +++ Sbjct: 481 VPYPFPTLRLNKDITRIEDFTIDDIKVENYRSHPVIKMEMAA 522 >gi|166164573|gb|ABY83785.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 124/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621 >gi|50302825|ref|XP_451349.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640480|emb|CAH02937.1| KLLA0A07843p [Kluyveromyces lactis] Length = 312 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 136/292 (46%), Positives = 176/292 (60%), Gaps = 29/292 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL +I G R DRTG GT S F Q+RF+LS FPLLTTK+V K ++ EL Sbjct: 21 QQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIILEL 80 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101 LWF+ G ++ L GV IW+ E+ D ++G+LGP+YG QWR + Sbjct: 81 LWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYKT 140 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ+ I+ L+ +PY RR I+SAWN KMALPPCH QFYV Sbjct: 141 CDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSFPKG 200 Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 +LSC LYQRS D+ LG+PFNIASY+LLT M+A V + GEFIHTLGD H+Y +H Sbjct: 201 EGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVYKDH 260 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + Q++R PR P++ I N+ D+ F+YEDF + Y PH I K+SV Sbjct: 261 VDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEITDYNPHGKIQMKMSV 312 >gi|1093364|prf||2103303A dihydrofolate reductase/thymidylate synthase Length = 521 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 130/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRRFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ L +PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 418 CMLYQRSCDMGLAVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ L + D + Y P+ I K++V Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521 >gi|166164575|gb|ABY83786.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 124/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621 >gi|330719294|ref|ZP_08313894.1| thymidylate synthase [Leuconostoc fallax KCTC 3537] Length = 324 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 135/319 (42%), Positives = 178/319 (55%), Gaps = 56/319 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + +++ G+ + DRTG GTRS FG QMRF+L +GFP+LTTKKV + + ELLW Sbjct: 6 QQYLDLAKTILETGTHKSDRTGTGTRSLFGAQMRFNLQEGFPILTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L ++ IWDEWA Sbjct: 66 FLRGDNNIRFLLQNNNHIWDEWAFKNWVTSSEYTGPDMTDFGLRAQSDPEFNQIYQEQKS 125 Query: 85 -------------DKDGELGPIYGVQWRSWPD---YDGNVI---DQISSIVQSLRADPYS 125 +K G +G +YG WR W + D N DQI +++ ++ P S Sbjct: 126 LFVDKILNDDDFMEKFGYIGEVYGKLWRDWENQDPMDQNATLHTDQIQNLIDGIKTTPDS 185 Query: 126 RRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLT 185 RR IVSAWN LP CH L QFYV +GKLS QLYQRS D+FLG+PFNIASYSLL Sbjct: 186 RRLIVSAWNAGSTPNAPLPSCHVLSQFYVADGKLSAQLYQRSADIFLGVPFNIASYSLLI 245 Query: 186 MMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYE 245 M+A+ G+ G+F+HTLGD H+YNNH Q + QLSR LP++ +NP + + + + Sbjct: 246 HMIAAQTGYAVGDFVHTLGDAHIYNNHVAQIETQLSRPMHPLPKLWLNPEVKSIFDYTMD 305 Query: 246 DFTLRSYEPHAAILAKVSV 264 D L Y AI A V+V Sbjct: 306 DIKLIDYTSEPAIKAPVAV 324 >gi|302142537|emb|CBI19740.3| unnamed protein product [Vitis vinifera] Length = 469 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 130/281 (46%), Positives = 171/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +I G+ + D+TG GT S FG QMRF+L FPLLTTK+V W+ VV ELLWF+ Sbjct: 189 YLRQLKEIISSGAHKADKTGTGTVSKFGCQMRFNLRLSFPLLTTKRVFWRGVVEELLWFI 248 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103 G +N L + + IWD E+ D ++G+LGPIYG QWR + D Sbjct: 249 SGSTNAKVLQKKDIHIWDGNASREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTNMHAD 308 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ P RR I+S+WN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 309 YMGKGFDQLLDVIDKIKNKPDDRRIILSSWNPSDLKLMALPPCHMFAQFYVANGELSCQM 368 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT M+A V G G+FI +GD H+Y H + QL + Sbjct: 369 YQRSADMGLGVPFNIASYALLTCMIAHVCGILPGDFILIIGDAHIYKTHIRPLEEQLQKL 428 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP D+ SF DF L Y PH I K+SV Sbjct: 429 PKPFPILKINPQKKDIESFVAADFELIGYNPHQKIEMKMSV 469 >gi|145567018|gb|ABP81859.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] Length = 621 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 176/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I + F DFT+++Y H I Sbjct: 579 RIPYPFPTLKLNPEIKSIEDFTISDFTIQNYVHHDKI 615 >gi|146412684|ref|XP_001482313.1| thymidylate synthase [Meyerozyma guilliermondii ATCC 6260] gi|146393077|gb|EDK41235.1| thymidylate synthase [Meyerozyma guilliermondii ATCC 6260] Length = 302 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 137/292 (46%), Positives = 181/292 (61%), Gaps = 31/292 (10%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-GFPLLTTKKVHWKSVVHELLW 61 YLDL H+I G R DRTG GT+S F Q+RFDLS FPLLTTKKV K+++HELLW Sbjct: 11 YLDLCSHIITHGEHRPDRTGTGTKSVFAPPQLRFDLSNDSFPLLTTKKVFSKAIIHELLW 70 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ GD++ ++L GV IW+ E+ DK G+LGP+YG QWR + Sbjct: 71 FVAGDTDANHLSEKGVKIWEGNGSREYLDKLGLTDRRVGDLGPVYGFQWRHFGAQYKTCD 130 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNG- 157 +Y G DQ+ +++ L+ +PY RR I+SAWN +MALPPCH QFYV D G Sbjct: 131 DNYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAQMALPPCHVFCQFYVSFPDAGR 190 Query: 158 -KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++ GEFIHT+GD H+YN+H + Sbjct: 191 PKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIHTMGDAHVYNDHIDAL 250 Query: 217 DLQLSRSPRTLPQMIINPN----IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P++ I I + F + DF + Y+P+ I K+SV Sbjct: 251 KEQLQRTPREFPKLYIKEERKHQITSIDDFTFSDFEIVDYDPYGPIKMKMSV 302 >gi|68073909|ref|XP_678869.1| bifunctional dihydrofolate reductase-thymidylate synthase [Plasmodium berghei strain ANKA] gi|56499470|emb|CAH97634.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Plasmodium berghei] Length = 585 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 126/276 (45%), Positives = 180/276 (65%), Gaps = 20/276 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+++ DRTG G S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 305 YQYLNIIYDMIMHGNNQDDRTG-GVLSKFGYMMKFNLNEYFPLLTTKKLFIRGIIEELLW 363 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADKD------GELGPIYGVQWRSW--------P 102 F+RG++N + L V IW+ E+ D+ +LGPIYG QWR + Sbjct: 364 FIRGETNGNTLLEKNVRIWEANGTREFLDRKLFHREVNDLGPIYGFQWRHFGAEYTDMHD 423 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y +DQ+ +I+ ++ DP RR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 424 NYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSCI 483 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH E +QL+R Sbjct: 484 MYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQAAEFIHVLGNAHVYNNHIESLKIQLNR 543 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 +P P + +NP+I ++ F DFT+++Y H I Sbjct: 544 TPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKI 579 >gi|304404471|ref|ZP_07386132.1| thymidylate synthase [Paenibacillus curdlanolyticus YK9] gi|304346278|gb|EFM12111.1| thymidylate synthase [Paenibacillus curdlanolyticus YK9] Length = 281 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 125/281 (44%), Positives = 172/281 (61%), Gaps = 50/281 (17%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWA--------- 84 MRFDL++GFPLLTTK++ ++ +V ELLWF++GD+N+ YL +H +IW+EWA Sbjct: 1 MRFDLNEGFPLLTTKRIPFRLIVSELLWFMKGDTNIRYLLQHNNNIWNEWAFKRWVESAS 60 Query: 85 ---------------DKD--------------------------GELGPIYGVQWRSWPD 103 D+D GELG +YG QWR+W Sbjct: 61 YEGPDMANFGLRSQTDEDFAASYTEQMNRFKELVLTDDAFAAQFGELGDVYGKQWRAWQT 120 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 G+ +DQ+ +++ ++ +P SRR IVSAWN I MALPPCH LFQFYV +GKLSCQL Sbjct: 121 TKGDTLDQLHDVIEMIKRNPDSRRLIVSAWNPEDIPLMALPPCHTLFQFYVADGKLSCQL 180 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+FLGIPFNIASY+LLT ++A G GEF+HTLGD H+Y NH +Q QL+R+ Sbjct: 181 YQRSADIFLGIPFNIASYALLTHLIARECGLAVGEFVHTLGDAHIYTNHMDQIQEQLARA 240 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++LP++ ++ + + ED + Y+PH I A V+V Sbjct: 241 PKSLPKLELSGDWTSVFDAEVEDIAVEGYDPHPTIKAPVAV 281 >gi|224080379|ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa] gi|222849082|gb|EEE86629.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa] Length = 528 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 127/281 (45%), Positives = 174/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL +++ +I G+ + DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 248 YLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFPLLTTKKVFWRGVVEELLWFI 307 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103 G ++ L G+ IWD E+ D ++G+LGP+YG QWR + D Sbjct: 308 SGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGARYTDMHAD 367 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 368 YTGQGFDQLLDVIDKIKNNPNDRRIIISAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 427 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT ++A V G+F+H +GD H+Y+ H QL + Sbjct: 428 YQRSADMGLGVPFNIASYALLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQEQLRKL 487 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + IN D+ +F DF L Y+PH I K++V Sbjct: 488 PKPFPILKINSEKKDIDTFVAADFKLIGYDPHQKIEMKMAV 528 >gi|283481329|emb|CAZ69445.1| bifunctional dihydrofolate reductase-thymidylate synthase [Emiliania huxleyi virus 99B1] Length = 480 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 125/277 (45%), Positives = 166/277 (59%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL L+ V++ G R DRTG GT S FG MRF+LS FPLLTTK+ +WK +V ELLW Sbjct: 198 YQYLQLISKVLEHGEYRSDRTGTGTVSLFGETMRFNLSTHFPLLTTKRTYWKGIVEELLW 257 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG +N + L V IWD +D G+LGP+YG QWR + Sbjct: 258 FIRGSTNANELAAKNVKIWDGNGSRDFLDSVGLVDNEEGDLGPVYGFQWRHFGADYKTMH 317 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 YD DQ+ +++ ++ +P SRR I+SAWN ++KMALPPCH + QFYV +G LSC Sbjct: 318 DSYDSQGTDQLQNVIDQIKNNPTSRRIIMSAWNPNALEKMALPPCHIMCQFYVHDGMLSC 377 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT ++A + GEFIH +GD H+Y NH + QL Sbjct: 378 QMYQRSADIGLGVPFNIASYALLTCLIAHFTNLKPGEFIHVIGDAHVYTNHIDALKTQLK 437 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + IN + +D L Y+ H I Sbjct: 438 RKPYDFPTIHINNMPKTIFDVTSDDIILNDYKCHPKI 474 >gi|312077491|ref|XP_003141327.1| thymidylate synthase [Loa loa] gi|307763509|gb|EFO22743.1| thymidylate synthase [Loa loa] Length = 305 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 132/284 (46%), Positives = 170/284 (59%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 ++YLD +RH++K G DRTGVGT S FG + L G P+LTTK+V+WK VV ELL Sbjct: 22 NKYLDQIRHILKNGERIDDRTGVGTISVFGMHSVYSLRNGVVPVLTTKRVYWKGVVEELL 81 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WF+RGD+N +L GV IWD + +G+LGP+YG QWR Sbjct: 82 WFIRGDTNAKHLSEKGVRIWDANGSRQFLDQCGFNDRSEGDLGPVYGFQWRHCGAEYRGM 141 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY IDQ+S I+ ++ +P+SRR I+SAWNV + M LPPCH L QF V N +LS Sbjct: 142 DADYTNRGIDQLSEIIDLIKNEPHSRRIILSAWNVKDLKLMVLPPCHTLAQFAVRNDELS 201 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGD+ LG+PFN+ASY LLT M+A + G + G H LGD H+Y NH + QL Sbjct: 202 CQLYQRSGDMGLGVPFNLASYGLLTHMIAHICGLKAGYLCHVLGDAHVYVNHVDALQEQL 261 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PRT P + NI + F YE L +Y P I ++V Sbjct: 262 RRQPRTFPTVRFVGNIKTIDDFTYESIILENYRPMPTIKMAMAV 305 >gi|115299504|gb|ABI93722.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] Length = 369 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 130/266 (48%), Positives = 170/266 (63%), Gaps = 21/266 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLD++R ++K G + DRTGVGT S FG MRF+L++ FPLLTTKKV ++ V ELLW Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGAVEELLW 163 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101 FLRGD+N L GV IW+ E+ D G +LGP+YG QWR + Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY+ +DQ+ ++Q L+ +P SRR I+SAWN + +++MALPPCH + QF+V NGKLSC Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLEQMALPPCHVMSQFFVANGKLSC 283 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LGIPFNIASY+LLT MLA GEF+H LGD H+Y+NH + Q+ Sbjct: 284 MMYQRSCDLGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDF 247 R P P + I L YEDF Sbjct: 344 RVPYPFPILKIKSQ-KSLFDHTYEDF 368 >gi|73852583|ref|YP_293867.1| bifunctional dihydrofolate reductase-thymidylate synthase [Emiliania huxleyi virus 86] gi|72415299|emb|CAI65536.1| bifunctional dihydrofolate reductase-thymidylate synthase [Emiliania huxleyi virus 86] Length = 480 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 125/277 (45%), Positives = 166/277 (59%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL L+ V++ G R DRTG GT S FG MRF+LS FPLLTTK+ +WK +V ELLW Sbjct: 198 YQYLQLISKVLEHGEYRSDRTGTGTVSLFGETMRFNLSTHFPLLTTKRTYWKGIVEELLW 257 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG +N + L V IWD +D G+LGP+YG QWR + Sbjct: 258 FIRGSTNANELAAKNVKIWDGNGSRDFLDSVGLVDNEEGDLGPVYGFQWRHFGADYKTMH 317 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 YD DQ+ +++ ++ +P SRR I+SAWN ++KMALPPCH + QFYV +G LSC Sbjct: 318 DSYDSQGTDQLQNVIDQIKNNPTSRRIIMSAWNPNALEKMALPPCHLMCQFYVHDGMLSC 377 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT ++A + GEFIH +GD H+Y NH + QL Sbjct: 378 QMYQRSADIGLGVPFNIASYALLTCLIAHFTNLKPGEFIHVIGDAHVYTNHIDALKTQLK 437 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + IN + +D L Y+ H I Sbjct: 438 RKPYDFPTIHINNMPKTIFDVTSDDIILNDYKCHPKI 474 >gi|320580614|gb|EFW94836.1| Thymidylate synthase [Pichia angusta DL-1] Length = 296 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 133/288 (46%), Positives = 178/288 (61%), Gaps = 27/288 (9%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 YLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV +K ++HELLW Sbjct: 9 YLDLCQRIISEGEHRPDRTGTGTYSVFAPPQLRFSLKDNKFPLLTTKKVFFKGILHELLW 68 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F+ G+++ L GV IW+ E+ D ++G+LGP+YG QWR + Sbjct: 69 FIAGETDAKKLTEKGVKIWEGNGSREYLDSLGLTHRREGDLGPVYGFQWRHFGAEYVDCD 128 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--- 158 DY G DQ++ I+ +LR +PY RR I+SAWN MALPPCH QFYV K Sbjct: 129 TDYTGKGYDQLAKIIDTLRTNPYDRRIILSAWNPPAFKDMALPPCHVFCQFYVSFPKNSK 188 Query: 159 --LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 LSC +YQRS D+ LG+PFNIASY+LLT M++ V+ + GEFIHT+GD H+Y +H + Sbjct: 189 PQLSCIMYQRSCDMGLGVPFNIASYALLTHMISHVVDMEPGEFIHTMGDSHVYCDHVDAL 248 Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P + IN + + FR+EDF ++ YEP+ I ++SV Sbjct: 249 KEQLKRTPRAFPTLKINRKVTSIDDFRFEDFEVKDYEPYGPIKMQMSV 296 >gi|85373857|ref|YP_457919.1| thymidylate synthase [Erythrobacter litoralis HTCC2594] gi|84786940|gb|ABC63122.1| thymidylate synthase [Erythrobacter litoralis HTCC2594] Length = 327 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 139/305 (45%), Positives = 182/305 (59%), Gaps = 43/305 (14%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL+R + GS+R DRTGVGTRS FG Q+RFDL+ G PLLTTK+V+WK+ E+LW Sbjct: 23 QYLDLMRRIWAEGSERVDRTGVGTRSVFGAQLRFDLADGAMPLLTTKRVYWKTATREMLW 82 Query: 62 FLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGPI 93 FL GD+N+ L GV IW+EW A++ G+LGP+ Sbjct: 83 FLTGDTNIRPLVLQGVKIWNEWPHARYVNETGEDIALDDFIQRIADDEAFAERWGDLGPV 142 Query: 94 YGVQWRSWPDY----DG-----NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144 YG QW WP Y DG I+QI+ +V+SL+ +P SRRHI+ WNVA +D+MALP Sbjct: 143 YGKQWVDWPTYRYRKDGLYEKSEGINQIAEVVESLKTNPGSRRHIIEGWNVAELDRMALP 202 Query: 145 PCHCLFQFYV---DNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 PCH +QF+V D G+ L+C LYQRS DV LG+PFN+ S +LL M+A + GE Sbjct: 203 PCHKTYQFHVAKDDQGRDRLNCLLYQRSCDVALGLPFNLWSAALLQRMMAQQTDLEPGEL 262 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 + GD HLY NH QL+R P+ P + I + +R EDF + +YEPH I Sbjct: 263 VWMGGDTHLYLNHEHLITEQLNREPQGHPTLEIVRRPDSIFDYRIEDFVVHNYEPHPPIK 322 Query: 260 AKVSV 264 A V+V Sbjct: 323 APVAV 327 >gi|166164565|gb|ABY83781.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 124/274 (45%), Positives = 175/274 (63%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVGGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621 >gi|289466111|gb|ADC94826.1| dihydrofolate reductase-thymidylate synthase [Plasmodium reichenowi] Length = 598 Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 123/277 (44%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 316 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 375 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 376 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 435 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV D+MAL PCH L QFYV +GKLSC Sbjct: 436 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDFDQMALLPCHILCQFYVFDGKLSC 495 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 496 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 555 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP+I ++ F DFT+++Y H I Sbjct: 556 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 592 >gi|197107405|pdb|3DL6|A Chain A, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis gi|197107406|pdb|3DL6|B Chain B, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis gi|197107407|pdb|3DL6|C Chain C, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis gi|197107408|pdb|3DL6|D Chain D, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis gi|197107409|pdb|3DL6|E Chain E, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis Length = 521 Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 128/283 (45%), Positives = 180/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV + + EL+WF Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVFIRGIFEELIWF 298 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++GD+N ++L V IW E+ ++ G +LGPIYG QWR + Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I ++V Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521 >gi|3097056|emb|CAA05895.1| dihydrofolate reductase-thymidylate synthetase precursor [Daucus carota] Length = 577 Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 130/282 (46%), Positives = 173/282 (61%), Gaps = 21/282 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ ++I G + DRT GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 296 YLGLVENIISNGVTKNDRTRTGTVSIFGCQMRFNLRKSFPLLTTKKVFWRGVVEELLWFI 355 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103 G +N L GV+IW+ E+ D ++G+LGPIYG QWR + D Sbjct: 356 SGSTNAKILKEKGVNIWEGNGSREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTDMHAD 415 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 416 YSGQGFDQLLDVISKIKNNPDDRRIIQSAWNPSDLRLMALPPCHMFAQFYVANGELSCQM 475 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSR 222 YQRS D+ LG+PFNIA+Y+LLT M+A V G+F+H++GD H+Y+NH + Sbjct: 476 YQRSADMGLGVPFNIAAYALLTCMIAHVCDLVPGDFVHSIGDAHVYSNHLSDLFETSFRM 535 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+T P + IN D+ SF DF L Y+PH I K++V Sbjct: 536 LPKTFPVLKINSGEKDIDSFEAADFKLIGYDPHQKIEMKMAV 577 >gi|152149198|pdb|2OIP|A Chain A, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|152149199|pdb|2OIP|B Chain B, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|152149200|pdb|2OIP|C Chain C, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|152149201|pdb|2OIP|D Chain D, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|152149202|pdb|2OIP|E Chain E, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis Length = 519 Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 128/283 (45%), Positives = 180/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV + + EL+WF Sbjct: 237 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRGIFEELIWF 296 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++GD+N ++L V IW E+ ++ G +LGPIYG QWR + Sbjct: 297 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 356 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 357 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 416 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 417 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 476 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I ++V Sbjct: 477 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 519 >gi|1169424|sp|P45350|DRTS_DAUCA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|288615|emb|CAA78954.1| dihydrofolate reductase-thymidylate synthetase [Daucus carota] Length = 528 Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 130/282 (46%), Positives = 173/282 (61%), Gaps = 21/282 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ ++I G + DRT GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 247 YLGLVENIISNGVTKNDRTRTGTVSIFGCQMRFNLRKSFPLLTTKKVFWRGVVEELLWFI 306 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103 G +N L GV+IW+ E+ D ++G+LGPIYG QWR + D Sbjct: 307 SGSTNAKILKEKGVNIWEGNGSREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTDMHAD 366 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 367 YSGQGFDQLLDVISKIKNNPDDRRIIQSAWNPSDLRLMALPPCHMFAQFYVANGELSCQM 426 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSR 222 YQRS D+ LG+PFNIA+Y+LLT M+A V G+F+H++GD H+Y+NH + Sbjct: 427 YQRSADMGLGVPFNIAAYALLTCMIAHVCDLVPGDFVHSIGDAHVYSNHLSDLFETSFRM 486 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+T P + IN D+ SF DF L Y+PH I K++V Sbjct: 487 LPKTFPVLKINSGEKDIDSFEAADFKLIGYDPHQKIEMKMAV 528 >gi|166164571|gb|ABY83784.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 123/274 (44%), Positives = 175/274 (63%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ WNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCTWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621 >gi|145567022|gb|ABP81861.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] Length = 621 Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 123/277 (44%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+Y+NH + +QL+ Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYSNHIDSLKVQLN 578 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I ++ F DFT+++Y H I Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKI 615 >gi|316933227|ref|YP_004108209.1| thymidylate synthase [Rhodopseudomonas palustris DX-1] gi|315600941|gb|ADU43476.1| thymidylate synthase [Rhodopseudomonas palustris DX-1] Length = 300 Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 134/295 (45%), Positives = 176/295 (59%), Gaps = 34/295 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDLL V+ G +R DRTGVGTR+ FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 8 HQYLDLLAQVLARGDERIDRTGVGTRALFGAMVRFDLSDGTVPILTTKRVYWKTAVKEML 67 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L + V IW +W A + G+LGP Sbjct: 68 WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDPISQDEFEKRIVADDAFAARWGDLGP 127 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +VQ+LR +P SRR + AWN + MALPPCH ++Q+ Sbjct: 128 VYGKQWRRWLGADGREHDQIADLVQTLRNNPASRRMLFHAWNPPELGAMALPPCHMVYQY 187 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V G+L C LYQRS D+ LG PFN + L +MLA GE I GDVHLY N Sbjct: 188 HVTQGGRLDCLLYQRSCDLLLGAPFNFVGATALQLMLAQQANLTPGELIWVGGDVHLYLN 247 Query: 212 HFEQADLQLSRSPRTLPQMII--NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q++R+PR LP M + P+ +D ++ DF + Y+PHAAI A V+V Sbjct: 248 HLDQAREQIARAPRPLPAMRLMRRPDSID--GYKITDFEVEGYDPHAAIKADVAV 300 >gi|61207219|gb|AAX40340.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 129/273 (47%), Positives = 170/273 (62%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A V G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKVTGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|166164561|gb|ABY83779.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 620 Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 124/274 (45%), Positives = 175/274 (63%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+ G++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 406 FIGGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 619 >gi|149247396|ref|XP_001528110.1| thymidylate synthase [Lodderomyces elongisporus NRRL YB-4239] gi|146448064|gb|EDK42452.1| thymidylate synthase [Lodderomyces elongisporus NRRL YB-4239] Length = 312 Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 137/301 (45%), Positives = 181/301 (60%), Gaps = 40/301 (13%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 YLDL +I G R DRTG GT+S F Q+RFDLS FPLLTTK+V K ++HELLW Sbjct: 12 YLDLCERIINEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKRVFSKGIIHELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ G ++ L GV IW+ E+ DK +G+LGP+YG QWR + Sbjct: 72 FIAGSTDAKILSDKGVKIWEGNGLREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKDCD 131 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------ 155 DY G DQ+ +++ L+ +PY RR I+SAWN KMALPPCH QFYV+ Sbjct: 132 ADYTGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPSNKN 191 Query: 156 --------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVH 207 KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+ GEFIHTLGD H Sbjct: 192 DEQNSEKSRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLGDAH 251 Query: 208 LYNNHFEQADLQLSRSPRTLPQMIINPN----IVDLLSFRYEDFTLRSYEPHAAILAKVS 263 +Y +H E Q +R+P+ P+++I + I ++ F++EDF + YEP+ AI K+S Sbjct: 252 VYLDHVEALQEQFTRTPKQFPKLVIKEDRREEIKNIDDFKFEDFEIVGYEPYPAIKMKMS 311 Query: 264 V 264 V Sbjct: 312 V 312 >gi|114768942|ref|ZP_01446568.1| thymidylate synthase [alpha proteobacterium HTCC2255] gi|114549859|gb|EAU52740.1| thymidylate synthase [alpha proteobacterium HTCC2255] Length = 292 Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 134/292 (45%), Positives = 182/292 (62%), Gaps = 28/292 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L +++ G + DRTGVGT S FGYQ+RF+L +GFP +TTKK+ W+S+V ELL Sbjct: 1 MKQYLDALNYIMDNGEEVSDRTGVGTLSVFGYQIRFNLQEGFPAVTTKKLAWRSIVGELL 60 Query: 61 WFLRGDSNVSYLHR-----------HGVSIWDEWADKDG------------ELGPIYGVQ 97 WFL G ++ L H +IW AD G ELGP+YG Q Sbjct: 61 WFLEGSTDERRLAELTFNKDRTDLVHKKTIWTANADAQGAELGYENNDLIKELGPVYGHQ 120 Query: 98 WRSWPDYDGNV---IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154 WR + D ++ DQI ++ ++ +P SRR I+SAWN I++MALPPCH + QF V Sbjct: 121 WRHFDGTDKDISLSTDQIIWLINEIKNNPDSRRMILSAWNPNQINEMALPPCHTMAQFRV 180 Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 NGKLSCQLYQRS D+FLG+PFNIASYSLLT MLA + + G F+ GD H+Y NH + Sbjct: 181 MNGKLSCQLYQRSADMFLGVPFNIASYSLLTHMLAQLCDLKVGSFVWVGGDCHIYKNHKK 240 Query: 215 QADLQLSRSPRTLP--QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q QL R+P++LP +M N+ +LL R + L++Y+P +I A +++ Sbjct: 241 QVLEQLKRTPKSLPNLEMPSFSNLDELLQTRPIGYVLKNYDPMDSIKAPMAI 292 >gi|221053708|ref|XP_002258228.1| bifunctional dihydrofolate reductase-thymidylate synthase [Plasmodium knowlesi strain H] gi|193808061|emb|CAQ38765.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Plasmodium knowlesi strain H] Length = 626 Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 121/283 (42%), Positives = 180/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L + V IW+ ++ +LGPIYG QWR + Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKIAMEMAA 626 >gi|61207195|gb|AAX40328.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 170/273 (62%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG+++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 289 WFLRGETHAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|222086396|ref|YP_002544930.1| thymidylate synthase protein [Agrobacterium radiobacter K84] gi|254790227|sp|B9JH03|TYSY_AGRRK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|221723844|gb|ACM27000.1| thymidylate synthase protein [Agrobacterium radiobacter K84] Length = 307 Score = 254 bits (649), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 135/303 (44%), Positives = 179/303 (59%), Gaps = 42/303 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLDL+ H+++ G R DRTGVGT S G MRFDLSKG P+ TTK+V+WK V E+L Sbjct: 7 YQYLDLMAHLLENGDRRIDRTGVGTLSGLGAMMRFDLSKGQLPVFTTKRVYWKLAVKEML 66 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL GD+N+ L + V IW +W A+ G+LGP Sbjct: 67 WFLTGDTNIRNLLKQNVRIWTDWPLAAYRKATGEAISQEDFEARILADEAFAETWGDLGP 126 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W D DG V DQI++++ LR +P SRR I AWNV + MALPPCH ++QF Sbjct: 127 VYGKQWRQWRDADGQVHDQIATVIDQLRHNPSSRRMIFHAWNVGELAGMALPPCHMVYQF 186 Query: 153 YVDN---------GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 +V N +LS +YQRS D+FLG PFNI ++L M+A + GE + Sbjct: 187 HVSNLPSPGETKRPRLSLMVYQRSCDLFLGNPFNICQQAVLLAMVAQQVDMDVGELVWAG 246 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLP--QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 GDVH+Y NH + QLSR PR P +++ P+ +D +R EDF + YEPHAAI A+ Sbjct: 247 GDVHIYLNHLDAIREQLSREPRPFPTLRLLRRPDSID--DYRIEDFEVSDYEPHAAIAAE 304 Query: 262 VSV 264 V+V Sbjct: 305 VAV 307 >gi|294441235|gb|ADE75019.1| dihydrofolate reductase-thymidylate synthase [Plasmodium knowlesi] Length = 626 Score = 254 bits (649), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 121/277 (43%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L + V IW+ ++ +LGPIYG QWR + Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP + ++ F DFT+ +Y H I Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKI 620 >gi|61207215|gb|AAX40338.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 254 bits (649), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDSGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|6226856|sp|O02604|DRTS_PLAVI RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|2266747|emb|CAA66805.1| dihydrofolate reductase-thymidylate synthetase [Plasmodium vivax] Length = 623 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 341 YQYLGIIYDIIMNGNKQGDRTGVGVMSNFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 400 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 401 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 460 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 461 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 520 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 521 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 580 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 581 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 623 >gi|14599956|gb|AAK71177.1|AF358959_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] Length = 491 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 130/273 (47%), Positives = 170/273 (62%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490 >gi|14599934|gb|AAK71166.1|AF358948_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599936|gb|AAK71167.1|AF358949_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599938|gb|AAK71168.1|AF358950_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599940|gb|AAK71169.1|AF358951_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599942|gb|AAK71170.1|AF358952_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599944|gb|AAK71171.1|AF358953_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599946|gb|AAK71172.1|AF358954_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599948|gb|AAK71173.1|AF358955_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599952|gb|AAK71175.1|AF358957_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599960|gb|AAK71179.1|AF358961_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599964|gb|AAK71181.1|AF358963_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599968|gb|AAK71183.1|AF358965_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] Length = 491 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490 >gi|61207207|gb|AAX40334.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207209|gb|AAX40335.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207211|gb|AAX40336.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207213|gb|AAX40337.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207221|gb|AAX40341.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 130/273 (47%), Positives = 170/273 (62%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|14599890|gb|AAK71144.1|AF358926_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599892|gb|AAK71145.1|AF358927_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599894|gb|AAK71146.1|AF358928_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599896|gb|AAK71147.1|AF358929_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599898|gb|AAK71148.1|AF358930_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599900|gb|AAK71149.1|AF358931_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599904|gb|AAK71151.1|AF358933_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599906|gb|AAK71152.1|AF358934_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599908|gb|AAK71153.1|AF358935_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599912|gb|AAK71155.1|AF358937_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599914|gb|AAK71156.1|AF358938_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599916|gb|AAK71157.1|AF358939_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599918|gb|AAK71158.1|AF358940_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599922|gb|AAK71160.1|AF358942_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] Length = 491 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 130/273 (47%), Positives = 170/273 (62%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490 >gi|294441233|gb|ADE75018.1| dihydrofolate reductase-thymidylate synthase [Plasmodium knowlesi] Length = 626 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 121/277 (43%), Positives = 177/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L + V IW+ ++ +LGPIYG QWR + Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP + ++ F DFT+ +Y H I Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKI 620 >gi|61207201|gb|AAX40331.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207203|gb|AAX40332.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207205|gb|AAX40333.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|61207189|gb|AAX40325.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|61207183|gb|AAX40322.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207185|gb|AAX40323.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207191|gb|AAX40326.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207197|gb|AAX40329.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|115299506|gb|ABI93723.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] Length = 369 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 130/266 (48%), Positives = 169/266 (63%), Gaps = 21/266 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLD++R ++K G + DRTGVGT S FG MRF+L++ FPLLTTKKV ++ VV ELL Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGVVEELLR 163 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101 FLRGD+N L GV IW+ E+ D G +LGP+YG QWR + Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY+ +DQ+ ++Q L+ +P SRR I+SAWN + + +MALPPCH + QF+V NGKLSC Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQMALPPCHVMSQFFVANGKLSC 283 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D LGIPFNIASY+LLT MLA GEF+H LGD H+Y+NH + Q+ Sbjct: 284 MMYQRSCDFGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDF 247 R P P + I L + YEDF Sbjct: 344 RVPYPFPILKIKSK-KSLFDYTYEDF 368 >gi|14599920|gb|AAK71159.1|AF358941_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599924|gb|AAK71161.1|AF358943_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599926|gb|AAK71162.1|AF358944_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599928|gb|AAK71163.1|AF358945_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599930|gb|AAK71164.1|AF358946_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599932|gb|AAK71165.1|AF358947_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599950|gb|AAK71174.1|AF358956_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599954|gb|AAK71176.1|AF358958_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599958|gb|AAK71178.1|AF358960_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599962|gb|AAK71180.1|AF358962_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599966|gb|AAK71182.1|AF358964_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] Length = 491 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490 >gi|99030329|gb|ABF61430.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] gi|99082911|gb|ABF66629.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618 >gi|99082907|gb|ABF66627.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMELAA 618 >gi|186702037|gb|ACC91330.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 624 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 624 >gi|186702039|gb|ACC91331.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 624 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 624 >gi|99082913|gb|ABF66630.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNKKLFHREVNDLGPIYGFQWRHFGAGYTNMH 455 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618 >gi|186702047|gb|ACC91335.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 624 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 624 >gi|186702041|gb|ACC91332.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] gi|186702043|gb|ACC91333.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] gi|186702045|gb|ACC91334.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] gi|186702051|gb|ACC91337.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 624 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 624 >gi|99082915|gb|ABF66631.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618 >gi|156098099|ref|XP_001615082.1| bifunctional dihydrofolate reductase-thymidylate synthase 1 [Plasmodium vivax SaI-1] gi|148803956|gb|EDL45355.1| bifunctional dihydrofolate reductase-thymidylate synthase 1, putative [Plasmodium vivax] Length = 624 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKIAMEMAA 624 >gi|14599974|gb|AAK71186.1|AF358968_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma vespertilionis] Length = 491 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 130/273 (47%), Positives = 169/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCKEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490 >gi|166164551|gb|ABY83774.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 641 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 124/277 (44%), Positives = 175/277 (63%), Gaps = 20/277 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 359 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 418 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 419 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 478 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ P SRR I+ AW V +DKMALPPCH L QFY+ +GKLSC Sbjct: 479 DNYENKGIDQLKNIINLIKNVPTSRRIILCAWYVKDLDKMALPPCHILCQFYIFDGKLSC 538 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 539 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 598 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 R P P + +NP I ++ F DFT+ +Y H I Sbjct: 599 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 635 >gi|284156874|gb|ADB79640.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156878|gb|ADB79642.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156880|gb|ADB79643.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156902|gb|ADB79654.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156906|gb|ADB79656.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156910|gb|ADB79658.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156922|gb|ADB79664.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 476 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 461 KRVPRAFPYLV 471 >gi|186702049|gb|ACC91336.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 630 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 467 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 468 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 588 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 630 >gi|284156876|gb|ADB79641.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156896|gb|ADB79651.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156898|gb|ADB79652.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 477 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 124/251 (49%), Positives = 164/251 (65%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 461 KRVPRAFPYLV 471 >gi|284156914|gb|ADB79660.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 477 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 124/251 (49%), Positives = 164/251 (65%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 461 KRVPRAFPYLV 471 >gi|284156904|gb|ADB79655.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 477 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 124/251 (49%), Positives = 164/251 (65%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 461 KRVPRAFPYLV 471 >gi|284156866|gb|ADB79636.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 478 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 461 KRVPRAFPYLV 471 >gi|284156926|gb|ADB79666.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 477 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 222 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 281 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 282 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 341 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 342 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 401 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 402 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 461 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 462 KRVPRAFPYLV 472 >gi|284156868|gb|ADB79637.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156870|gb|ADB79638.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156872|gb|ADB79639.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156882|gb|ADB79644.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156884|gb|ADB79645.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156886|gb|ADB79646.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156888|gb|ADB79647.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156890|gb|ADB79648.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156892|gb|ADB79649.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156900|gb|ADB79653.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156908|gb|ADB79657.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156918|gb|ADB79662.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156920|gb|ADB79663.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156928|gb|ADB79667.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 476 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 461 KRVPRAFPYLV 471 >gi|284156912|gb|ADB79659.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 364 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 124/251 (49%), Positives = 164/251 (65%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 107 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 166 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 167 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 226 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 227 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 286 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 287 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 346 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 347 KRVPRAFPYLV 357 >gi|99082909|gb|ABF66628.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREANDLGPIYGFQWRHFGAEYTNMH 455 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLVKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHADSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618 >gi|284156924|gb|ADB79665.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 471 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 461 KRVPRAFPYLV 471 >gi|284156894|gb|ADB79650.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 477 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 124/251 (49%), Positives = 164/251 (65%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 461 KRVPRAFPYLV 471 >gi|116490829|ref|YP_810373.1| thymidylate synthase [Oenococcus oeni PSU-1] gi|290890274|ref|ZP_06553353.1| hypothetical protein AWRIB429_0743 [Oenococcus oeni AWRIB429] gi|122276989|sp|Q04FR4|TYSY_OENOB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116091554|gb|ABJ56708.1| thymidylate synthase [Oenococcus oeni PSU-1] gi|290480060|gb|EFD88705.1| hypothetical protein AWRIB429_0743 [Oenococcus oeni AWRIB429] Length = 319 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 128/314 (40%), Positives = 176/314 (56%), Gaps = 51/314 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R +++ G+ + DRT GT S FG QMRFDLS+GFPLLT+KKV + + ELLW Sbjct: 6 EQYLNLARRILETGASKMDRTKTGTHSIFGAQMRFDLSEGFPLLTSKKVAFGRIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L +H IWDEW Sbjct: 66 FLRGDNNIRFLLQHHNHIWDEWPFKKWVESNEYKGPDMTDFGLRTQKDPIFAEQYKEQKK 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDY-DGNVIDQISSIVQSLRADPYSRRHIV 130 + K G +G +YG WR WPD D +DQI+ ++ ++ +P SRR I+ Sbjct: 126 IFVDRILNDDEFSKKFGTIGDVYGKLWRHWPDANDDGSVDQITRLINEIKVNPNSRRLIL 185 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 +AW+ LP CH + QFYV +GK+S Q+YQRS D FLG+PFNIASYSLL M+A+ Sbjct: 186 TAWDPETTPFATLPSCHVMSQFYVVDGKISLQMYQRSADYFLGVPFNIASYSLLLSMVAA 245 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G + GEFIHT+GD H+YNNH +Q QLS+ LP + +NP++ + + D L Sbjct: 246 QTGLEVGEFIHTIGDAHIYNNHVDQIKEQLSKPTHKLPTLKLNPDVKSIFDYEMSDIKLE 305 Query: 251 SYEPHAAILAKVSV 264 +Y I A ++V Sbjct: 306 NYIHEDVIKAPIAV 319 >gi|296473671|gb|DAA15786.1| thymidylate synthase [Bos taurus] Length = 354 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 175/320 (54%), Gaps = 58/320 (18%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G R DRTG GT S FG Q R++L FPLLTTK+V WK V+ ELLWF Sbjct: 35 QYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRDEFPLLTTKRVFWKGVLEELLWF 94 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 95 IKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWRHFGAEYKDMDS 154 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 155 EYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 214 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ--- 219 LYQRSGD+ LG+PFNIASY+LLT M+A + + G+F+HTLGD H+Y NH E Q Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQALM 274 Query: 220 -----------------------------------LSRSPRTLPQMIINPNIVDLLSFRY 244 L R PR P++ I + + F+ Sbjct: 275 ELRGQSSRSLDGDGQAGTSRWAPVATDTERDRCCELQREPRPFPKLKILRKVETIDDFQA 334 Query: 245 EDFTLRSYEPHAAILAKVSV 264 EDF + Y PH I +++V Sbjct: 335 EDFQIEGYNPHPTIKMEMAV 354 >gi|118587059|ref|ZP_01544489.1| thymidylate synthase [Oenococcus oeni ATCC BAA-1163] gi|118432469|gb|EAV39205.1| thymidylate synthase [Oenococcus oeni ATCC BAA-1163] Length = 331 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 128/314 (40%), Positives = 176/314 (56%), Gaps = 51/314 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R +++ G+ + DRT GT S FG QMRFDLS+GFPLLT+KKV + + ELLW Sbjct: 18 EQYLNLARRILETGASKMDRTKTGTHSIFGAQMRFDLSEGFPLLTSKKVAFGRIKSELLW 77 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L +H IWDEW Sbjct: 78 FLRGDNNIRFLLQHHNHIWDEWPFKKWVESNEYKGPDMTDFGLRTQKDPIFAEQYKEQKK 137 Query: 84 ------------ADKDGELGPIYGVQWRSWPDY-DGNVIDQISSIVQSLRADPYSRRHIV 130 + K G +G +YG WR WPD D +DQI+ ++ ++ +P SRR I+ Sbjct: 138 IFVDRILNDDEFSKKFGTIGDVYGKLWRHWPDANDDGSVDQITRLINEIKVNPNSRRLIL 197 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 +AW+ LP CH + QFYV +GK+S Q+YQRS D FLG+PFNIASYSLL M+A+ Sbjct: 198 TAWDPETTPFATLPSCHVMSQFYVVDGKISLQMYQRSADYFLGVPFNIASYSLLLSMVAA 257 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G + GEFIHT+GD H+YNNH +Q QLS+ LP + +NP++ + + D L Sbjct: 258 QTGLEVGEFIHTIGDAHIYNNHVDQIKEQLSKPTHKLPTLKLNPDVKSIFDYEMSDIKLE 317 Query: 251 SYEPHAAILAKVSV 264 +Y I A ++V Sbjct: 318 NYIHEDVIKAPIAV 331 >gi|14599902|gb|AAK71150.1|AF358932_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599910|gb|AAK71154.1|AF358936_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] Length = 491 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 127/273 (46%), Positives = 168/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+ LT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYAFLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490 >gi|157864294|ref|XP_001680857.1| dihydrofolate reductase-thymidylate synthase [Leishmania major] gi|118936|sp|P07382|DRTS_LEIMA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|9546|emb|CAA36019.1| unnamed protein product [Leishmania major] gi|159310|gb|AAA29232.1| dihydrofolate reductase-thymidylate synthase (EC 1.5.1.3 and EC 2.1.1.45) [Leishmania major] gi|68124149|emb|CAJ02132.1| dihydrofolate reductase-thymidylate synthase [Leishmania major strain Friedlin] Length = 520 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 130/286 (45%), Positives = 173/286 (60%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WFLRG+++ L + IWD E+ D K+ +LGP+YG QWR + Sbjct: 295 WFLRGETSAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI IV++++ +P RR +V+AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIKLIVETIKTNPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH + Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P +I L + D + Y PH AI +++V Sbjct: 475 QLERVPHAFPTLIFKEERQYLEDYELTDMEVIDYVPHPAIKMEMAV 520 >gi|22003396|gb|AAM88659.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] Length = 520 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 130/286 (45%), Positives = 173/286 (60%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D K+ +LGP+YG QWR + Sbjct: 295 WFLRGETNAXLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI IV++++A+P RR +V+AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIRFIVETIKANPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH + Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P +I L + D + Y PH I ++++ Sbjct: 475 QLERVPHAFPTLIFKAERQFLEDYELTDMEVIDYVPHPPIKMEMAL 520 >gi|166164567|gb|ABY83782.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 123/274 (44%), Positives = 175/274 (63%), Gaps = 20/274 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ A NV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCARNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621 >gi|284156916|gb|ADB79661.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 462 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 207 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 266 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 267 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 326 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 327 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 386 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 387 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 446 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 447 KRVPRAFPYLV 457 >gi|22003398|gb|AAM88660.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] Length = 520 Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 130/286 (45%), Positives = 173/286 (60%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D K+ +LGP+YG QWR + Sbjct: 295 WFLRGETNARLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI IV++++A+P RR +V+AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIRFIVETIKANPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH + Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P +I L + D + Y PH I ++++ Sbjct: 475 QLERVPHAFPTLIFKAERQFLEDYELTDMEVIDYVPHPPIKMEMAL 520 >gi|254572255|ref|XP_002493237.1| Thymidylate synthase, required for de novo biosynthesis of pyrimidine deoxyribonucleotides [Pichia pastoris GS115] gi|238033035|emb|CAY71058.1| Thymidylate synthase, required for de novo biosynthesis of pyrimidine deoxyribonucleotides [Pichia pastoris GS115] Length = 298 Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 135/288 (46%), Positives = 178/288 (61%), Gaps = 27/288 (9%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 YLDL +IK G R DRTG GT S F Q+RF+L G FPLLTTKK K ++HELLW Sbjct: 11 YLDLCVRIIKEGEHRPDRTGTGTYSLFAPPQLRFNLRDGQFPLLTTKKTFVKGIIHELLW 70 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD----KD---GELGPIYGVQWRSW-------- 101 F+ G ++ L GV IW+ E+ D KD G+LGP+YG QWR + Sbjct: 71 FVEGCTDGKKLSEKGVRIWEGNGSREYLDSLGLKDREVGDLGPVYGFQWRHFGAQYKDCK 130 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--- 158 DY G DQ+S ++++LR +PY RR I+SAWN +KMALPPCH FYV K Sbjct: 131 TDYTGQGFDQLSRVIETLRTNPYDRRIIMSAWNPPDFEKMALPPCHVFCHFYVSFPKDKK 190 Query: 159 --LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 LSC +YQRS D+ LG+PFN+ASY+LLT M+A V+ G+FIHT+GD H+Y +H + Sbjct: 191 PELSCLMYQRSCDMGLGVPFNVASYALLTKMIAHVVDMDCGDFIHTMGDAHVYLDHVDAL 250 Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Q R P+ P + IN N D+ F++EDF + +Y+PH I K+SV Sbjct: 251 KVQAERIPKKFPTLRINTNTKDIDGFKFEDFQIDNYDPHPPIKMKMSV 298 >gi|14599970|gb|AAK71184.1|AF358966_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi marinkellei] gi|14599972|gb|AAK71185.1|AF358967_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi marinkellei] Length = 491 Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 124/251 (49%), Positives = 163/251 (64%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + D G +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGADYTHH 347 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKTIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCKEQL 467 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 468 KRVPRAFPYLV 478 >gi|99030335|gb|ABF61433.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 121/283 (42%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTG G S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGAGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKSVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLENVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618 >gi|61207187|gb|AAX40324.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 127/273 (46%), Positives = 168/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ + + G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRITREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|328352748|emb|CCA39146.1| thymidylate synthase [Pichia pastoris CBS 7435] Length = 296 Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 135/288 (46%), Positives = 178/288 (61%), Gaps = 27/288 (9%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 YLDL +IK G R DRTG GT S F Q+RF+L G FPLLTTKK K ++HELLW Sbjct: 9 YLDLCVRIIKEGEHRPDRTGTGTYSLFAPPQLRFNLRDGQFPLLTTKKTFVKGIIHELLW 68 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD----KD---GELGPIYGVQWRSW-------- 101 F+ G ++ L GV IW+ E+ D KD G+LGP+YG QWR + Sbjct: 69 FVEGCTDGKKLSEKGVRIWEGNGSREYLDSLGLKDREVGDLGPVYGFQWRHFGAQYKDCK 128 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--- 158 DY G DQ+S ++++LR +PY RR I+SAWN +KMALPPCH FYV K Sbjct: 129 TDYTGQGFDQLSRVIETLRTNPYDRRIIMSAWNPPDFEKMALPPCHVFCHFYVSFPKDKK 188 Query: 159 --LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 LSC +YQRS D+ LG+PFN+ASY+LLT M+A V+ G+FIHT+GD H+Y +H + Sbjct: 189 PELSCLMYQRSCDMGLGVPFNVASYALLTKMIAHVVDMDCGDFIHTMGDAHVYLDHVDAL 248 Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Q R P+ P + IN N D+ F++EDF + +Y+PH I K+SV Sbjct: 249 KVQAERIPKKFPTLRINTNTKDIDGFKFEDFQIDNYDPHPPIKMKMSV 296 >gi|254577775|ref|XP_002494874.1| ZYRO0A11704p [Zygosaccharomyces rouxii] gi|238937763|emb|CAR25941.1| ZYRO0A11704p [Zygosaccharomyces rouxii] Length = 310 Score = 251 bits (642), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 136/290 (46%), Positives = 177/290 (61%), Gaps = 27/290 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL++ ++ G R DRTG GT S F Q+RFDLS FPLLTTKKV K ++ EL Sbjct: 21 QQYLDLIQRILDEGEFRPDRTGTGTYSIFAPPQLRFDLSNDRFPLLTTKKVFTKGIILEL 80 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------ 101 LWF+ G ++ L GV IW+ E+ DK +G+LGP+YG QWR + Sbjct: 81 LWFISGCTDGKKLSEQGVKIWEGNGSREYLDKIGLHDRREGDLGPVYGFQWRHFGAKYRT 140 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ+ ++ L+ +PY RR I+SAWN MALPPCH QFYV Sbjct: 141 CDDDYTGQGFDQLHEVIHKLKNNPYDRRIIMSAWNPPDFPLMALPPCHVFSQFYVSFPKE 200 Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 KLSC LYQRS D+ LG+PFNIASYSLLT M+A V + GEFIHT+GD H+Y +H + Sbjct: 201 GKPKLSCLLYQRSCDMGLGVPFNIASYSLLTKMIAHVCDMEPGEFIHTMGDAHIYKDHID 260 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QLSR+P+ PQ+ I + ++ +F+YEDF + +Y PH I +SV Sbjct: 261 ALKEQLSRTPKDFPQLKIARKMDNIDNFKYEDFKIENYHPHGRIQMNMSV 310 >gi|50548459|ref|XP_501699.1| YALI0C10901p [Yarrowia lipolytica] gi|49647566|emb|CAG82008.1| YALI0C10901p [Yarrowia lipolytica] Length = 296 Score = 251 bits (642), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 27/288 (9%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 YLDL VI+ G R DRTG GT S F Q+RFDLS PLLTTK+V ++ V+ ELLW Sbjct: 9 YLDLCARVIEEGESRDDRTGTGTLSLFAPPQLRFDLSNDILPLLTTKRVFYRGVLEELLW 68 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ G ++ L + IWD E+ +K +G+LGP+YG QWR + Sbjct: 69 FVAGCTDGKKLSEKNIHIWDGNGSKEFLEKAGLGHRREGDLGPVYGFQWRHFGAEYKNCD 128 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-----DN 156 DY G +DQ+ ++ +LR +P+ RR I+SAWN A + KMALPPCH QFYV + Sbjct: 129 TDYTGQGVDQLKQVIHTLRTNPHDRRIILSAWNPADLPKMALPPCHMFCQFYVSYKNSER 188 Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 G+LSCQLYQRS D+ LG+PFNIASY+LLT M+A V GE IHT+GD H+Y +H + Sbjct: 189 GRLSCQLYQRSCDLGLGVPFNIASYALLTRMIAQVTDLDCGELIHTMGDAHVYKDHVDAL 248 Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q++R+P P++ +I D+ F YEDF L Y+P + I ++SV Sbjct: 249 KQQIARTPGQFPKLTFARDIKDIDGFNYEDFVLEGYKPQSKIEMQMSV 296 >gi|255717360|ref|XP_002554961.1| KLTH0F17864p [Lachancea thermotolerans] gi|238936344|emb|CAR24524.1| KLTH0F17864p [Lachancea thermotolerans] Length = 328 Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 135/292 (46%), Positives = 175/292 (59%), Gaps = 29/292 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTF-GYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL + +I+ G R DRTG GT S F Q+RFDLS FPLLTTK+V K ++ EL Sbjct: 37 QQYLDLCQRIIEEGDFRPDRTGTGTYSLFVPPQLRFDLSNDRFPLLTTKRVFTKGIILEL 96 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------ 101 LWF+ G ++ L GV IW+ E+ DK +G+LGP+YG QWR + Sbjct: 97 LWFISGCTDGKKLSEQGVKIWEGNGSREYLDKLGLTDRREGDLGPVYGFQWRHFGADYKT 156 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154 DY DQ+ I+ ++ +P RR I+SAWN KMALPPCH QFYV Sbjct: 157 CEDDYTNQGFDQLEDIIHRIKTNPTDRRIIMSAWNPPDFAKMALPPCHVFSQFYVTLPKK 216 Query: 155 --DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 + KLSC LYQRS D+ LG+PFNIASY+LLT M+A V + GEFIHT+GD H+Y +H Sbjct: 217 EGERPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVCEMEPGEFIHTMGDAHVYKDH 276 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + Q+ R PR P++ I N+ D+ F+YEDF + Y PH I K+SV Sbjct: 277 IDALKEQIQRFPRDFPKLKIKRNVADINDFKYEDFEISEYNPHGKIQMKMSV 328 >gi|99030331|gb|ABF61431.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 122/283 (43%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + + ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGKIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618 >gi|159404|gb|AAA29272.1| thymidylate synthase-dihydrofolate reductase (EC 2.1.1.45; EC 1.5.1.3) [Leishmania tropica] Length = 520 Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 129/286 (45%), Positives = 173/286 (60%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WFLRG+++ L + IWD E+ D K+ +LGP+YG QWR + Sbjct: 295 WFLRGETSAQLLTDKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI IV++++ +P RR +V+AWN + KMA+PPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIKLIVETIKTNPNDRRLLVTAWNPCALQKMAVPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH + Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P +I L + D + Y PH AI +++V Sbjct: 475 QLERVPHAFPTLIFKEERQYLEDYELTDMEVIDYVPHPAIKMEMAV 520 >gi|85708445|ref|ZP_01039511.1| Thymidylate synthase [Erythrobacter sp. NAP1] gi|85689979|gb|EAQ29982.1| Thymidylate synthase [Erythrobacter sp. NAP1] Length = 322 Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 132/304 (43%), Positives = 177/304 (58%), Gaps = 42/304 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYL+L+R + + GS+R DRTG GTRS G +R+DL+ G PLLTTK+V+WK+ E+LW Sbjct: 19 QYLNLMREIWERGSERMDRTGTGTRSIAGAMLRYDLADGAMPLLTTKRVYWKTATREMLW 78 Query: 62 FLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGPI 93 FL G++N+ L GV IW+EW A + G+LGP+ Sbjct: 79 FLTGETNIRPLVLQGVKIWNEWPHANYVRETGDEIALEDFVKRIADDEGFAKRWGDLGPV 138 Query: 94 YGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144 YG QW WP Y G I+Q++ +V+SLR +P SRRHI+ WNVA +D+MALP Sbjct: 139 YGKQWVDWPTYRYRKDGLYEKGEGINQVAEVVESLRNNPGSRRHIIEGWNVAELDRMALP 198 Query: 145 PCHCLFQFYVDNGK----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 PCH +QF+V K L+C LYQRS DV LG+PFN+ S +LLT M+A G + GE I Sbjct: 199 PCHKTYQFHVAGAKGKERLNCLLYQRSCDVALGLPFNLWSAALLTRMMAQQTGLEAGELI 258 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260 GDVHLY NH + QL+R P P++ I + ++ EDF + Y P I A Sbjct: 259 WMGGDVHLYLNHAHLIEEQLTREPTGNPRLEITRKPETIFDYKIEDFRVDDYAPLPPIKA 318 Query: 261 KVSV 264 V+V Sbjct: 319 PVAV 322 >gi|322496602|emb|CBZ31672.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 520 Score = 251 bits (641), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 130/286 (45%), Positives = 171/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D G +LGP+YG QWR + Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI SIV++++A+P RR + +AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH I +++V Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520 >gi|22001023|gb|AAM82248.1| dihydrofolate reductase/thymidylate synthase [Leishmania infantum] gi|321398942|emb|CAM65520.2| dihydrofolate reductase-thymidylate synthase [Leishmania infantum JPCM5] Length = 520 Score = 251 bits (641), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 130/286 (45%), Positives = 171/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D G +LGP+YG QWR + Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI SIV++++A+P RR + +AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH I +++V Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520 >gi|51869967|ref|YP_073520.1| thymidylate synthase [Lymphocystis disease virus - isolate China] gi|51858175|gb|AAU10859.1| thymidylate synthase [Lymphocystis disease virus - isolate China] Length = 286 Score = 251 bits (641), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 125/281 (44%), Positives = 175/281 (62%), Gaps = 21/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+ L++++ G + DRTG GT S FG Q R+DLS FPL TTK++ W+ +V ELLWFL Sbjct: 7 YLNQLKYILANGRLKIDRTGTGTLSVFGLQNRYDLST-FPLFTTKRMFWRGIVEELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------PD 103 +G +N L + V IWD + K +G+LGPIYG QWR + + Sbjct: 66 KGSTNSLNLSKKSVHIWDAYGSKSNLNRLGFNHREEGDLGPIYGFQWRHFGANYINCHTN 125 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y+G IDQ+ I+ L+ +P RR +++AWN + ID+ LPPCH L QFY + LSCQ Sbjct: 126 YEGQGIDQLQIIITKLKTNPNDRRILMTAWNPSDIDQAVLPPCHVLCQFYAIDNILSCQC 185 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFN+ASY+LLT ++A + + GEFIHTLGD H+Y +H + QL+RS Sbjct: 186 YQRSADMGLGVPFNVASYALLTYLIAQAVDMKPGEFIHTLGDAHIYLDHIKAIKEQLTRS 245 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P +I+ +L F++EDF L Y PH AI +S+ Sbjct: 246 IKPSPVVILKKKSDNLCDFKFEDFELLDYNPHPAISLDLSI 286 >gi|22121984|gb|AAM88576.1| dhfr-ts [Leishmania chagasi] Length = 520 Score = 251 bits (641), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 130/286 (45%), Positives = 172/286 (60%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D K+ +LGP+YG QWR + Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI SIV++++A+P RR + +AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH I +++V Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520 >gi|61207193|gb|AAX40327.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 127/273 (46%), Positives = 168/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QW + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWHHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|45188092|ref|NP_984315.1| ADR219Cp [Ashbya gossypii ATCC 10895] gi|44982909|gb|AAS52139.1| ADR219Cp [Ashbya gossypii ATCC 10895] Length = 340 Score = 251 bits (640), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 135/291 (46%), Positives = 174/291 (59%), Gaps = 28/291 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 QYLDL + +I+ G R DRTG GT S F Q+RFDLS FPLLTTKKV + ++ EL Sbjct: 50 QQYLDLCKRIIEHGEFRPDRTGTGTYSLFAPPQLRFDLSGDKFPLLTTKKVFTRGIILEL 109 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101 LWF+ G ++ L GV IW+ E+ D ++G+LGP+YG QWR + Sbjct: 110 LWFIAGCTDGKKLSEQGVKIWEGNGSREYLDGLGLHDRREGDLGPVYGFQWRHFGAEYGT 169 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-- 157 DY G +DQ+ ++ ++ PY RR I+SAWN A KMALPPCH L QFYV G Sbjct: 170 CDDDYTGKGVDQLRELIDKIKNKPYDRRIILSAWNPADFPKMALPPCHVLSQFYVSFGPE 229 Query: 158 ----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 KLSCQLYQRS D+ LG+PFNIASY+LLT M+A V GEFIHT+GD H+Y++H Sbjct: 230 GSRPKLSCQLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMDAGEFIHTMGDAHVYSDHI 289 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+ R PR P + I + D+ F +DF + Y PH I +SV Sbjct: 290 AALKEQIERVPREFPNLRIKRKVTDIDDFTLDDFEITDYNPHPRIQMNMSV 340 >gi|268568852|ref|XP_002640365.1| Hypothetical protein CBG20269 [Caenorhabditis briggsae] gi|187023537|emb|CAP37322.1| hypothetical protein CBG_20269 [Caenorhabditis briggsae AF16] Length = 315 Score = 251 bits (640), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 120/283 (42%), Positives = 175/283 (61%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61 +YL + +++ GS R DRTG GT S FG Q ++ L + PLLTTK+V+WK V+ ELLW Sbjct: 33 KYLKQVEQILQEGSRRDDRTGTGTISIFGMQSKYSLRNDTIPLLTTKRVYWKGVLEELLW 92 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101 F+ G ++ L V IW++ D+ +G+LGP+YG QWR + Sbjct: 93 FISGSTDGKLLMAKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDCH 152 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G IDQ++ +++ ++ +P SRR I+SAWN + + +M LPPCH + QFYVDNG+LSC Sbjct: 153 TDYTGQGIDQLAEVIRQIKEEPDSRRIILSAWNPSELGQMVLPPCHTMCQFYVDNGELSC 212 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFN+ASY LLT M+A V G + G +HTLGD H+Y+NH + Q+ Sbjct: 213 QLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKAGTLVHTLGDAHVYSNHVDALKTQME 272 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P++ ++ + F + L Y+ H I+ ++V Sbjct: 273 REPYAFPKIRFTRDVSSIDDFTSDMIVLEDYKCHGKIVMDMAV 315 >gi|61207217|gb|AAX40339.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 251 bits (640), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 127/273 (46%), Positives = 168/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S F QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFDAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|61207199|gb|AAX40330.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 127/273 (46%), Positives = 168/273 (61%), Gaps = 31/273 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMR L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRSSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WFLRG++ L GV IWD+ + + +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R PR P ++ FR E L YE Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491 >gi|149186677|ref|ZP_01864988.1| thymidylate synthase [Erythrobacter sp. SD-21] gi|148829585|gb|EDL48025.1| thymidylate synthase [Erythrobacter sp. SD-21] Length = 313 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 136/306 (44%), Positives = 176/306 (57%), Gaps = 43/306 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL+R + G +RRDRTG+GTRS FG Q+RFDL++G PL+TTK+V+WK+ ELL Sbjct: 8 QQYLDLMRLIWLEGDERRDRTGIGTRSVFGAQLRFDLAEGAMPLVTTKRVYWKTATRELL 67 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------ADKD------GELGP 92 WFL GD+N+ L GV IW+EW AD G+LGP Sbjct: 68 WFLTGDTNIRPLVLQGVKIWNEWPHARYVEQTGDEIELEAFVQKIADDQQFAAMWGDLGP 127 Query: 93 IYGVQWRSWPDYD---------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 +YG QW WP Y G I+Q++ +V+SL +P SRRHI+ WNVA + +MAL Sbjct: 128 VYGKQWVDWPTYQPVKGGLFRKGRGINQVAEVVESLNENPGSRRHIIEGWNVAEVPRMAL 187 Query: 144 PPCHCLFQFYVDNG-----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 PPCH +Q++V G L+ LYQRS DV LG+PFN+ S +LL M+A + Q GE Sbjct: 188 PPCHKTYQYHVSTGIDGEPLLNGILYQRSCDVALGLPFNLWSGALLLRMIAQQVDMQPGE 247 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 F+ GD HLY NH QLSR P LP + I + +R EDF + Y PH I Sbjct: 248 FVWMGGDTHLYLNHEHLVKEQLSREPHGLPTLEIVRRPPTIFDYRIEDFAVHDYTPHGPI 307 Query: 259 LAKVSV 264 A V+V Sbjct: 308 KAPVAV 313 >gi|264685644|dbj|BAI49171.1| hypothetical protein [Bacillus phage phiNIT1] Length = 305 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 124/295 (42%), Positives = 178/295 (60%), Gaps = 37/295 (12%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +Y +L++ ++ G+ + DRTG GT S FG QM FDLSKGFP+LTTKK+ ++ + EL WF Sbjct: 7 EYFNLVKKIMDEGTFKDDRTGTGTLSLFGPQMEFDLSKGFPMLTTKKLPFRIIAEELFWF 66 Query: 63 LRGDSNVSYLHRHGVSIWDE-----WADKDG----------------ELGPIYGVQWRSW 101 + GD+++ L ++IW + + D G +LGPIYG QWRSW Sbjct: 67 INGDTDLKTLLDKNINIWTDDAYRFYLDNGGSLTKSGFIQRTKNAGFDLGPIYGKQWRSW 126 Query: 102 PDYDGNVI------------DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 G V+ DQ+ +++ + +P SRRHIVSAWNV ++ MALPPCH L Sbjct: 127 ----GGVVTVGDSMGYQMKHDQLFRVIKDISTNPDSRRHIVSAWNVGDLEYMALPPCHVL 182 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 FQFYV NG LSC+LY RS D+FLG PFNIASY+LLT ++A + G + G+ I+++GD H+Y Sbjct: 183 FQFYVVNGTLSCKLYMRSNDIFLGAPFNIASYALLTHIIAKMTGLKVGKLIYSVGDAHIY 242 Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH + Q+ R P+ +PQ+ + ++ + ED L Y+ H I K+S Sbjct: 243 VNHLDLLKSQMEREPKEMPQLEVKAVHENIEDYTLEDIVLTGYDAHPTIKGKLST 297 >gi|99082917|gb|ABF66632.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 121/283 (42%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S GY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKCGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618 >gi|72073194|ref|XP_797720.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115944415|ref|XP_001195886.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 309 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 121/239 (50%), Positives = 159/239 (66%), Gaps = 20/239 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL+RH+ G + DRTG GT+S FG Q R++L FPLLTTK+V W+ V ELLWF Sbjct: 46 QYLDLIRHIQAHGHVKGDRTGTGTKSIFGAQSRYNLRDQFPLLTTKRVFWRGVAEELLWF 105 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SWP 102 ++G +N + L + IWD KD G+LGP+YG QWR + Sbjct: 106 VKGCTNATELQDKKIHIWDANGSKDFLEKRGLGHYEEGDLGPVYGFQWRHFGAEYKDRFT 165 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+++++++++ +P RR I+SAWN + KMALPPCH QFYV NG+LSCQ Sbjct: 166 DYTGQGVDQLANVIETIKNNPDDRRIIMSAWNPPDLPKMALPPCHAFVQFYVCNGELSCQ 225 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRSGD+ LG+PFNIASYSLLT M+A V G + G+F+HTLGD H+Y NH E Q+S Sbjct: 226 LYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGDFVHTLGDAHVYLNHIEPLKEQVS 284 >gi|241951452|ref|XP_002418448.1| thymidylate synthase, putative [Candida dubliniensis CD36] gi|223641787|emb|CAX43749.1| thymidylate synthase, putative [Candida dubliniensis CD36] Length = 315 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 136/304 (44%), Positives = 177/304 (58%), Gaps = 43/304 (14%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 YLDL + +I G R DRTG GT+S F Q+RFDLS FPLLTTKKV K ++HELLW Sbjct: 12 YLDLCKKIIDEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ G ++ L GV IW+ E+ DK +G+LGP+YG QWR + Sbjct: 72 FVAGSTDAKILSEKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKDCD 131 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------ 155 DY G DQ+ +++ L+ +PY RR I+SAWN KMALPPCH QFYV+ Sbjct: 132 SDYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPTSQP 191 Query: 156 -----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204 KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+ GEFIHTLG Sbjct: 192 DSNNPKQAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLG 251 Query: 205 DVHLYNNHFEQADLQLSRSPRTLPQMII----NPNIVDLLSFRYEDFTLRSYEPHAAILA 260 D H+Y +H + Q R P+ P+++I I + F++EDF + YEP+ I Sbjct: 252 DAHVYLDHIDALKEQFERIPKQFPKLVIKEERKAEIKSIDDFKFEDFEIIGYEPYPPIKM 311 Query: 261 KVSV 264 K+SV Sbjct: 312 KMSV 315 >gi|4249575|dbj|BAA74947.1| thymidylate synthase [Oryza sativa] Length = 322 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 131/317 (41%), Positives = 174/317 (54%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + ++ G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV + + ELLW Sbjct: 6 QQYLDLAQKILAEGNLKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 66 FLRGDNNIRFLLQHNNHIWDEWAFKNWVESNDYTGPDMTNFGHRAETDPEFAAVYQTQKA 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADPYSRR 127 +K G +G +YG WR W ++ +V+ ++ P SRR Sbjct: 126 IFVDKILNDDAFMEKFGYVGDVYGKLWRGWETSSVTAGAETVESSCGLVEEIKTTPDSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNADTTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ G+F+HT+GD H+YNNH Q QLSR LP++ +NP++ + + D Sbjct: 246 MAAQTGYEVGDFVHTIGDTHIYNNHVAQITEQLSRPMHPLPKLWLNPDVKSIFDYTMADI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + YE A I A V+V Sbjct: 306 KVLDYESEAPIKAPVAV 322 >gi|83716002|ref|NP_001032905.1| thymidylate synthase [Bos taurus] gi|122144944|sp|Q2TA32|TYSY_BOVIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|83406125|gb|AAI11140.1| Thymidylate synthetase [Bos taurus] Length = 354 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 175/320 (54%), Gaps = 58/320 (18%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G R DRTG GT S FG Q R++L FPLLTTK+V WK V+ ELLWF Sbjct: 35 QYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRDEFPLLTTKRVFWKGVLEELLWF 94 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 95 IKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWRHFGAEYKDMDS 154 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 155 EYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 214 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ--- 219 LYQRSGD+ LG+PFNIASY+LLT M+A + + G+F+HTLGD H+Y NH E Q Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQALM 274 Query: 220 -----------------------------------LSRSPRTLPQMIINPNIVDLLSFRY 244 L R PR P++ I + + F+ Sbjct: 275 ELRGQSSRSLDGDGQAGTSRWAPVATDTERDRCCELQREPRPFPKLKILRKVETIDDFQA 334 Query: 245 EDFTLRSYEPHAAILAKVSV 264 EDF + Y P+ I +++V Sbjct: 335 EDFQIEGYNPNPTIKMEMAV 354 >gi|68482174|ref|XP_714971.1| hypothetical protein CaO19.11033 [Candida albicans SC5314] gi|68482301|ref|XP_714908.1| hypothetical protein CaO19.3549 [Candida albicans SC5314] gi|1174838|sp|P12461|TYSY_CANAL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|7537304|gb|AAA34374.2| thymidylate synthase precursor [Candida albicans] gi|46436507|gb|EAK95868.1| hypothetical protein CaO19.3549 [Candida albicans SC5314] gi|46436572|gb|EAK95932.1| hypothetical protein CaO19.11033 [Candida albicans SC5314] gi|238882292|gb|EEQ45930.1| thymidylate synthase [Candida albicans WO-1] Length = 315 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 136/304 (44%), Positives = 177/304 (58%), Gaps = 43/304 (14%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 YLDL + +I G R DRTG GT+S F Q+RFDLS FPLLTTKKV K ++HELLW Sbjct: 12 YLDLCKRIIDEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F+ G ++ L GV IW+ E+ DK +G+LGP+YG QWR + Sbjct: 72 FVAGSTDAKILSEKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKDCD 131 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------ 155 DY G DQ+ +++ L+ +PY RR I+SAWN KMALPPCH QFYV+ Sbjct: 132 SDYTGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPTSSP 191 Query: 156 -----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204 KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+ GEFIHTLG Sbjct: 192 DPNNPKQAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLG 251 Query: 205 DVHLYNNHFEQADLQLSRSPRTLPQMIINP----NIVDLLSFRYEDFTLRSYEPHAAILA 260 D H+Y +H + Q R P+ P+++I I + F++EDF + YEP+ I Sbjct: 252 DAHVYLDHIDALKEQFERIPKQFPKLVIKEERKNEIKSIDDFKFEDFEIVGYEPYPPIKM 311 Query: 261 KVSV 264 K+SV Sbjct: 312 KMSV 315 >gi|154331155|ref|XP_001562017.1| dihydrofolate reductase-thymidylate synthase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059339|emb|CAM37041.1| dihydrofolate reductase-thymidylate synthase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 521 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 125/286 (43%), Positives = 173/286 (60%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVG S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 236 RQYLELIDRIMKTGIAKEDRTGVGILSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 295 Query: 61 WFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSW------- 101 WFLRG++N L + IWD A+K+ +LGP+YG QWR + Sbjct: 296 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTANKEMDLGPVYGFQWRHFGAQYKGF 355 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI SIV++++ +P RR +++AWN + +MALPPCH L QFYV D + Sbjct: 356 EANYDGEGVDQIKSIVETIKVNPNDRRLLLTAWNPCALHEMALPPCHLLAQFYVNTDAKE 415 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH + + Sbjct: 416 LSCMLYQRSCDMGLGVPFNIASYALLTILMAKATGLRPGELVHTLGDAHVYRNHIDALKV 475 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+P P ++ L + D + Y P+ I +++V Sbjct: 476 QLERTPNAFPTLVFKREREFLEDYELSDMEVIDYAPYPPIKMEMAV 521 >gi|224004314|ref|XP_002295808.1| possible thymidylate synthase [Thalassiosira pseudonana CCMP1335] gi|209585840|gb|ACI64525.1| possible thymidylate synthase [Thalassiosira pseudonana CCMP1335] Length = 516 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 125/287 (43%), Positives = 176/287 (61%), Gaps = 25/287 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61 QYL++ R +I+ G R DRTG GT S FG QMR+ L PLLTTK+ W+ V ELLW Sbjct: 230 QYLEICRDIIENGVRRGDRTGTGTLSKFGVQMRYSLRDNTLPLLTTKRTFWRGVAEELLW 289 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101 F++G +N + L + IWD E+ D ++G+LGP+YG QWR + Sbjct: 290 FVKGSTNANELADKNIHIWDGNGSREFLDSRGLQHREEGDLGPVYGFQWRHFGAEYKDMH 349 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159 DY G +DQ++ + + +P RR ++SAWN +D MALPPCH QFYVD ++ Sbjct: 350 ADYTGQGVDQLADCIDKIINNPEDRRIVMSAWNPKDLDVMALPPCHMFCQFYVDTDRNEV 409 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQ+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH + Q Sbjct: 410 SCQMYQRSADMGLGVPFNIASYALLTHMIAKVTGRKAGDFVHTIGDAHVYLNHVDALKEQ 469 Query: 220 LSRSPRTLPQMIIN--PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R PR P++ + + D+ F ++DF + Y+PH I K++V Sbjct: 470 LERKPRAFPKLKMKDGKDFNDIDGFEFDDFEVVGYKPHKTIKMKMAV 516 >gi|146071663|ref|XP_001463169.1| dihydrofolate reductase-thymidylate synthase [Leishmania infantum] Length = 395 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 130/286 (45%), Positives = 172/286 (60%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 110 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 169 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D K+ +LGP+YG QWR + Sbjct: 170 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 229 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI SIV++++A+P RR + +AWN + KMALPPCH L QFYV D + Sbjct: 230 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 289 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH Sbjct: 290 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 349 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH I +++V Sbjct: 350 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 395 >gi|99030333|gb|ABF61432.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 120/283 (42%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY ++F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMVKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG+++ + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETDGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618 >gi|4039150|gb|AAC97508.1| thymidylate synthase [Caenorhabditis elegans] Length = 315 Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 120/284 (42%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 ++YL + +++ G+ R DRTG GT S FG Q ++ L G PLLTTK+V+WK V+ ELL Sbjct: 32 YKYLKQVEQILREGTRRDDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRVYWKGVLEELL 91 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WF+ G ++ L V IW++ D+ +G+LGP+YG QWR + Sbjct: 92 WFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDC 151 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ++ +++ ++ P SRR I+SAWN + + +M LPPCH + QFYVDNG+LS Sbjct: 152 HTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSDLGQMVLPPCHTMCQFYVDNGELS 211 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGD+ LG+PFN+ASY LLT M+A V G + G +HTLGD H+Y+NH + +QL Sbjct: 212 CQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPGTLVHTLGDAHVYSNHVDALKIQL 271 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P++ ++ + F + L Y+ H I ++V Sbjct: 272 DREPYAFPKIRFTRDVASIDDFTSDMIALDDYKCHPKIPMDMAV 315 >gi|224471863|sp|Q07PP0|TYSY_RHOP5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 298 Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 136/293 (46%), Positives = 177/293 (60%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDLL V++ G R DRTGVGTR+ FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 6 HQYLDLLAQVLEKGDQRIDRTGVGTRALFGAMIRFDLSDGRVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L + V IW +W A + G+LGP Sbjct: 66 WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDSISQEDFEKRVVEDNAFATRWGDLGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +VQ+L+++P SRR + AWN + MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWLGADGREYDQIAELVQTLKSNPASRRMLFHAWNPPELGAMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +GKL+C LYQRS D+ LG FN A+ S L +MLA GEFI GDVHLY N Sbjct: 186 HVTSSGKLNCILYQRSCDLLLGAAFNYAAASALQLMLAQQADLTPGEFIWFGGDVHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q+SR+PR P M + + +R DF + YEPHAAI A V+V Sbjct: 246 HLDQAREQISRAPRPFPTMRLTRRPDSIDGYRISDFEVDGYEPHAAIKADVAV 298 >gi|71993377|ref|NP_491532.3| hypothetical protein Y110A7A.4 [Caenorhabditis elegans] gi|7331734|gb|AAF60422.1| Hypothetical protein Y110A7A.4 [Caenorhabditis elegans] Length = 312 Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 120/284 (42%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 ++YL + +++ G+ R DRTG GT S FG Q ++ L G PLLTTK+V+WK V+ ELL Sbjct: 29 YKYLKQVEQILREGTRRDDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRVYWKGVLEELL 88 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WF+ G ++ L V IW++ D+ +G+LGP+YG QWR + Sbjct: 89 WFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDC 148 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ++ +++ ++ P SRR I+SAWN + + +M LPPCH + QFYVDNG+LS Sbjct: 149 HTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSDLGQMVLPPCHTMCQFYVDNGELS 208 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGD+ LG+PFN+ASY LLT M+A V G + G +HTLGD H+Y+NH + +QL Sbjct: 209 CQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPGTLVHTLGDAHVYSNHVDALKIQL 268 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P++ ++ + F + L Y+ H I ++V Sbjct: 269 DREPYAFPKIRFTRDVASIDDFTSDMIALDDYKCHPKIPMDMAV 312 >gi|115524163|ref|YP_781074.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] gi|115518110|gb|ABJ06094.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] Length = 300 Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 136/293 (46%), Positives = 177/293 (60%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDLL V++ G R DRTGVGTR+ FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 8 HQYLDLLAQVLEKGDQRIDRTGVGTRALFGAMIRFDLSDGRVPILTTKRVYWKTAVKEML 67 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L + V IW +W A + G+LGP Sbjct: 68 WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDSISQEDFEKRVVEDNAFATRWGDLGP 127 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +VQ+L+++P SRR + AWN + MALPPCH ++Q+ Sbjct: 128 VYGKQWRRWLGADGREYDQIAELVQTLKSNPASRRMLFHAWNPPELGAMALPPCHMVYQY 187 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +GKL+C LYQRS D+ LG FN A+ S L +MLA GEFI GDVHLY N Sbjct: 188 HVTSSGKLNCILYQRSCDLLLGAAFNYAAASALQLMLAQQADLTPGEFIWFGGDVHLYLN 247 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q+SR+PR P M + + +R DF + YEPHAAI A V+V Sbjct: 248 HLDQAREQISRAPRPFPTMRLTRRPDSIDGYRISDFEVDGYEPHAAIKADVAV 300 >gi|146276896|ref|YP_001167055.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17025] gi|172046015|sp|A4WQT6|TYSY_RHOS5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145555137|gb|ABP69750.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17025] Length = 298 Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 130/293 (44%), Positives = 173/293 (59%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 YLDLL V+ G R DRTGVGT S FG +RFDLSKG P+LTTKKV+WK+ V E+L Sbjct: 6 QHYLDLLAQVLARGDRRVDRTGVGTLSLFGAMLRFDLSKGAAPILTTKKVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L + V IW +W A + G+LGP Sbjct: 66 WFLTGGTNIRPLLQQNVRIWTDWPLAAYRRATGEEIGQAEFEARIVADEGFAARWGDLGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ ++++LR +P SRR + AWNVA + +MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWLGPDGREHDQIAGLIETLRTNPASRRMLFHAWNVAEVGQMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS D+ LG PFN + L +M+A GE + GD HLY N Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQADLLPGELVWVGGDTHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQA Q+SR+PR P+M + + +R EDF + YE H AI A+V+V Sbjct: 246 HLEQAREQISRAPRDWPRMQLVRRAESIDDYRIEDFAVEGYESHPAIAAEVAV 298 >gi|99082919|gb|ABF66633.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 121/283 (42%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MAL PCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALLPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618 >gi|19115217|ref|NP_594305.1| thymidylate synthase (predicted) [Schizosaccharomyces pombe 972h-] gi|74665572|sp|Q9UTI7|TYSY_SCHPO RecName: Full=Probable thymidylate synthase; Short=TS; Short=TSase gi|5725409|emb|CAB52423.1| thymidylate synthase (predicted) [Schizosaccharomyces pombe] Length = 625 Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 131/295 (44%), Positives = 180/295 (61%), Gaps = 32/295 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59 QYL+L+R++++ G R DRTG GTRS F Q+RF L + PLLTTK+V + V+ EL Sbjct: 331 EQYLNLIRYILENGQSRPDRTGTGTRSVFAPPQLRFSLRNNTLPLLTTKRVFLRGVLEEL 390 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101 LWF+ GD+N ++L G+ IWD E+ D K G+LGPIYG QWR + Sbjct: 391 LWFIHGDTNANHLSEKGIHIWDGNGSREFLDSRGLTDRKVGDLGPIYGFQWRHFGAQYVD 450 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--- 156 DY +DQ++ ++ +L+ +PY RR I+SAWN I +MALPPCH QFYV Sbjct: 451 CDTDYTNKGVDQLAQVISTLKLNPYDRRIILSAWNPLAIPEMALPPCHIFCQFYVSEPCK 510 Query: 157 --GK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 GK LS +YQRS D+ LG+PFNIASYSLLT M+A + G++ EF+H +GD H+YN+H Sbjct: 511 PGGKPQLSSMMYQRSADMGLGVPFNIASYSLLTHMIAHMCGYEAAEFVHVMGDCHIYNDH 570 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLL---SFRYEDFTLRSYEPHAAILAKVSV 264 E QL R P+ P++ + D+ SF +DF + Y P+ I K+SV Sbjct: 571 LEALQTQLERVPKAFPKLFFKRDAKDIGSIDSFSVDDFAVEGYNPYGPIKMKMSV 625 >gi|296283919|ref|ZP_06861917.1| thymidylate synthase [Citromicrobium bathyomarinum JL354] Length = 310 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 133/303 (43%), Positives = 175/303 (57%), Gaps = 40/303 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYLDL+ H+ + G +R DRTG+GTRS FG Q+R L+ PLLTTK+V+WK+ E L Sbjct: 8 QQYLDLMAHIWRTGDERVDRTGIGTRSVFGAQLRCSLTDNAVPLLTTKRVYWKTAARETL 67 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------ADKD------GELGP 92 WFL G +N+ L GV IW+EW AD + G+LGP Sbjct: 68 WFLTGATNIRPLVLQGVKIWNEWPHARYVKETGDDLPLDDFVQRIADDESFAARWGDLGP 127 Query: 93 IYGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 +YG QW WP Y G IDQ+S ++ SLR +P SRRHI+ WNVA +D+MAL Sbjct: 128 VYGKQWVDWPTYRYRPDGLYEKGEGIDQVSQVIDSLRTNPGSRRHIIEGWNVAELDRMAL 187 Query: 144 PPCHCLFQFYVD-NG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 PPCH +QF+V NG +L+C LYQRS DV LG+PFN+ +LLT M+A + GE + Sbjct: 188 PPCHKTYQFHVGANGTQLNCLLYQRSCDVALGLPFNLFGAALLTRMIAQQTDLEPGELVW 247 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 GD HLY NH + QL R PR P++ I + + EDF++ Y+PH I A Sbjct: 248 MGGDTHLYLNHAHLIEEQLGREPRGAPRLEITRRPPGIFDYAIEDFSVSGYDPHPPIKAP 307 Query: 262 VSV 264 V+V Sbjct: 308 VAV 310 >gi|86137413|ref|ZP_01055990.1| Thymidylate synthase [Roseobacter sp. MED193] gi|85825748|gb|EAQ45946.1| Thymidylate synthase [Roseobacter sp. MED193] Length = 298 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 129/293 (44%), Positives = 172/293 (58%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLDL+ V++ G +R DRTGVGTRS FG +RFDLS G P+ TTK+V+WK+ V E+L Sbjct: 6 YQYLDLMERVLEQGDERIDRTGVGTRSLFGAMVRFDLSDGTAPIFTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L + V IW +W A + GELGP Sbjct: 66 WFLTGQTNIQSLLKDNVRIWTDWPLATYRRETGEDVSQEEFEQRVVNDDAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +V++LR P SRR + WNVA + +MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWMGADGREHDQIAGLVRALRETPASRRMLFHGWNVAELGEMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+C L+QRS D+ LG PFN S L +MLA GE + GDVHLY N Sbjct: 186 HVTSDGRLNCLLFQRSVDLLLGKPFNCVGASALLLMLAQQADLVPGELVWVGGDVHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 HFEQA Q+ R PR P+M + + + DF + Y PH I A+V+V Sbjct: 246 HFEQAREQIKRQPRPFPKMSLLKRAASIDDYEIGDFQVDGYAPHPPISAEVAV 298 >gi|126274226|ref|XP_001387889.1| Thymidylate synthase [Scheffersomyces stipitis CBS 6054] gi|126213759|gb|EAZ63866.1| Thymidylate synthase [Pichia stipitis CBS 6054] Length = 316 Score = 248 bits (634), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 134/307 (43%), Positives = 180/307 (58%), Gaps = 44/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 YLDL +I G R DRTG GT+S F Q+RFDLS FPLLTTKKV + ++HEL Sbjct: 10 QAYLDLCEKIINEGEFRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSRGIIHEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101 LWF+ G ++ L GV IW+ E+ D ++G+LGP+YG QWR + Sbjct: 70 LWFVAGSTDAKLLSEKGVKIWEGNGSREFLDNLGLTHRREGDLGPVYGFQWRHFGAEYKD 129 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ++ +++ L+ +PY RR I+SAWN KMALPPCH QF+V Sbjct: 130 CDADYTGQGYDQLADVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFFVSFPST 189 Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++ GEFIH Sbjct: 190 NPESNTSKQAKAETRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIH 249 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----FRYEDFTLRSYEPHAA 257 TLGD H+Y +H + QL+R+P+ P+++I D ++ FR+EDF + YEP+ Sbjct: 250 TLGDAHVYLDHIDAIKEQLTRTPKDFPKLLIKEERKDKITSIDDFRFEDFEIVGYEPYPP 309 Query: 258 ILAKVSV 264 I K+SV Sbjct: 310 IKMKMSV 316 >gi|118935|sp|P16126|DRTS_LEIAM RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|9471|emb|CAA36020.1| unnamed protein product [Leishmania amazonensis] Length = 520 Score = 248 bits (634), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 128/286 (44%), Positives = 171/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIAKEDRTGVGTLSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D G +LGP+YG QWR + Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENTEMDLGPVYGFQWRHFGAEYRGL 354 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-- 158 +YDG +DQI IV++++A+P RR + +AWN + KMALPPCH L QFYV+ K Sbjct: 355 EANYDGEGVDQIKFIVETIKANPNDRRLLFTAWNPCALHKMALPPCHLLAQFYVNTEKSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y +H + Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRSHIDALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH I +++V Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELMDMEVIDYVPHPPIKMEMAV 520 >gi|15078937|ref|NP_149688.1| 225R [Invertebrate iridescent virus 6] gi|82039411|sp|Q9WBI3|TYSY_IIV6 RecName: Full=Probable thymidylate synthase 225R gi|4494906|gb|AAD21329.1| 225R [Invertebrate iridescent virus 6] Length = 295 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 133/290 (45%), Positives = 186/290 (64%), Gaps = 31/290 (10%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LL V+ G DR DRTG+GT++ FG Q++F+L FPLLTTKKV WK VV ELLWF Sbjct: 9 QYLNLLEKVLFQGEDRDDRTGIGTKNVFGEQLKFNLRTSFPLLTTKKVFWKGVVEELLWF 68 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWPD--------YD 105 + G ++VS L++ GV IW++ A+ K +LGPIYG QWR + + Y Sbjct: 69 ISGSTDVSVLNQKGVKIWNKNAESFYTQQNLFKKNDLGPIYGFQWRHYGENYIGCDNKYG 128 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---NGK--LS 160 G IDQ+ +I+ +++ +P+ RR I+ AWN KMALPPCHC+ F V NGK LS Sbjct: 129 G--IDQLKNIITTIQNEPWDRRMILLAWNPKDNSKMALPPCHCIAHFDVSSKINGKRELS 186 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY-----GEFIHTLGDVHLYNNHFEQ 215 C L+QRS D+ LG+PFNIASY+LLT ++A V G+F+HTL +VH+Y NH + Sbjct: 187 CHLFQRSADMGLGVPFNIASYALLTHIIAHVSSTNTELIVPGDFVHTLSNVHIYKNHIKA 246 Query: 216 ADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+SR PR P + IIN N ++ +F +DF L+ Y P+ A+ ++++ Sbjct: 247 LTEQISRIPRKFPTLEIINKN-KNIDAFSSKDFVLKDYNPYPALEMEMAL 295 >gi|198423472|ref|XP_002121808.1| PREDICTED: similar to Thymidylate synthase (TSase) (TS), partial [Ciona intestinalis] Length = 261 Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 122/261 (46%), Positives = 158/261 (60%), Gaps = 20/261 (7%) Query: 24 VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-- 81 GT+S FG QMRFDL FPLLTTK+V W+ V ELLWF+RG +N L V IWD Sbjct: 1 TGTKSIFGCQMRFDLRTSFPLLTTKRVFWRGVAEELLWFIRGSTNAKELADKNVHIWDAN 60 Query: 82 ---EWADKDG-------ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADP 123 ++ D G +LGP+YG QWR + DY +DQ+ ++ ++R +P Sbjct: 61 GSRKFLDNIGLTEREEFDLGPVYGFQWRHYGAEYKDMHSDYTNQGVDQLKKVIDTIRTNP 120 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 RR I+ AWN + KMALPPCH QFYV NG+LSCQLYQRS D+ LG+PFNIASYSL Sbjct: 121 NDRRIIMCAWNPVDLPKMALPPCHAFAQFYVCNGELSCQLYQRSADMGLGVPFNIASYSL 180 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A V G + G+F+HTLGD H+Y NH E QL R PR P + ++ + Sbjct: 181 LTCMIAHVTGLKPGDFVHTLGDAHVYLNHIEPLKEQLKREPRPFPTLKFKRDVNSIDEIT 240 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ED L Y+PH I ++++ Sbjct: 241 MEDLVLEGYKPHKKIQMEMAL 261 >gi|6686065|sp|O96650|TYSY_ASCSU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|4039148|gb|AAC97507.1| thymidylate synthase [Ascaris suum] Length = 294 Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 130/283 (45%), Positives = 170/283 (60%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 +YL ++H+I G DRTGVGT S FG + L G PLLTTK+V+WK VV ELLW Sbjct: 12 KYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F++GD++ L GV IWD E+ D +G+LGPIYG QWR + Sbjct: 72 FIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYHGTD 131 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ +++ ++ +P SRR I++AWNV + +MALPPCH L QF V NG+LSC Sbjct: 132 ADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVKNGELSC 191 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFN+ASY LLT M+A V + G H LGD H+Y NH + QLS Sbjct: 192 QLYQRSGDMGLGVPFNLASYGLLTHMIAHVCALKTGFLHHVLGDAHVYLNHIDALKEQLS 251 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I + F E L Y P A I ++V Sbjct: 252 RDPRPFPTVHFEGRIDSIDDFTAESIILNGYNPMAPIKMPMAV 294 >gi|294655762|ref|XP_002770180.1| DEHA2C06094p [Debaryomyces hansenii CBS767] gi|199430584|emb|CAR65545.1| DEHA2C06094p [Debaryomyces hansenii] Length = 316 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 133/307 (43%), Positives = 181/307 (58%), Gaps = 44/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 YLDL +I G R DRTG GT+S F Q+RF+LS FPLLTTKKV ++++HEL Sbjct: 10 QTYLDLCERIINEGEHRPDRTGTGTKSLFAPPQLRFNLSDDTFPLLTTKKVFSRAIIHEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101 LWF++G ++ L GV IW+ E+ D ++G+LGP+YG QWR + Sbjct: 70 LWFVQGCTDAKKLSEKGVKIWEGNGSREYLDSIGLTDRREGDLGPVYGFQWRHFGAEYKD 129 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ+ +++ L+ +PY RR I+SAWN KMALPPCH QFYV+ Sbjct: 130 CDADYSGQGVDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPNE 189 Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++ GEFIH Sbjct: 190 TPDSNTNKQQKTSSRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIH 249 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----FRYEDFTLRSYEPHAA 257 TLGD H+Y +H + QL R+P+ P++II D + F++EDF + Y+P+ Sbjct: 250 TLGDAHVYLDHVDALKEQLVRTPKDFPKLIIKEERKDEIKSIDDFKFEDFEIIGYDPYGP 309 Query: 258 ILAKVSV 264 I K+SV Sbjct: 310 IKMKMSV 316 >gi|322488320|emb|CBZ23567.1| dihydrofolate reductase-thymidylate synthase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 520 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 129/286 (45%), Positives = 170/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIAKEDRTGVGTLSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D G +LGP+YG QWR + Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENTEMDLGPVYGFQWRHFGAEYRGL 354 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-- 158 +YDG +DQI IV++++A+P RR + +AWN + KMALPPCH L QFYV+ K Sbjct: 355 EANYDGEGVDQIKFIVETIKANPNDRRLLFTAWNPCALHKMALPPCHLLAQFYVNTEKSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y +H Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRSHIGALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH AI ++V Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELMDMEVIDYVPHPAIKMDMAV 520 >gi|51894252|ref|YP_076943.1| thymidylate synthase [Symbiobacterium thermophilum IAM 14863] gi|62901280|sp|Q67JQ1|TYSY_SYMTH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|51857941|dbj|BAD42099.1| thymidylate synthase [Symbiobacterium thermophilum IAM 14863] Length = 283 Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 128/278 (46%), Positives = 176/278 (63%), Gaps = 16/278 (5%) Query: 3 QYLDLLRHV-------IKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSV 55 QYL+L R + I G +RTG+GT FG ++ D +GFP LTTKK+ + SV Sbjct: 6 QYLELCREILAENEQEIAEGRWTPNRTGMGTVGVFGRMLKHDFKEGFPALTTKKLFFNSV 65 Query: 56 VHELLWFLRGDSNVSYLHRHGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISS 114 ELLWFL G +++ +LH G IWD+ A ++G +LGPIYG QWR+W DG DQI+ Sbjct: 66 KAELLWFLAGRTDLEFLHERGCHIWDKDAARNGGKLGPIYGKQWRAWEGADGRTYDQIAW 125 Query: 115 IVQSLR---ADPY-----SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ++Q +R ADP SRR +VS WNVA +++MALPPCH FQF+V +G+L ++QR Sbjct: 126 VIQQIREIAADPERPHPNSRRLVVSPWNVADLEEMALPPCHGPFQFHVKDGRLHLAVWQR 185 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S D+FLG+PFNIASYSLL M+A V G G + H L DVH+Y N +Q LQL+R P Sbjct: 186 SADLFLGVPFNIASYSLLLHMVAQVTGLAVGTYTHYLNDVHIYRNLLDQVRLQLTREPYP 245 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP++ +NP + ++ F +D L Y+ H I ++S Sbjct: 246 LPRLWLNPEVREIDQFTMDDIQLVDYKHHPPIRGELST 283 >gi|324519207|gb|ADY47314.1| Thymidylate synthase [Ascaris suum] Length = 312 Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 130/283 (45%), Positives = 170/283 (60%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 +YL ++H+I G DRTGVGT S FG + L G PLLTTK+V+WK VV ELLW Sbjct: 30 KYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEELLW 89 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F++GD++ L GV IWD E+ D +G+LGPIYG QWR + Sbjct: 90 FIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYHGTD 149 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ +++ ++ +P SRR I++AWNV + +MALPPCH L QF V NG+LSC Sbjct: 150 ADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVRNGELSC 209 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFN+ASY LLT M+A V + G H LGD H+Y NH + QLS Sbjct: 210 QLYQRSGDMGLGVPFNLASYGLLTHMIAHVCALKTGFLHHVLGDAHVYLNHIDALKEQLS 269 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I + F E L Y P A I ++V Sbjct: 270 RDPRPFPTVHFEGRIDSIDDFTAESIILNGYNPMAPIKMPMAV 312 >gi|77463962|ref|YP_353466.1| thymidylate synthase [Rhodobacter sphaeroides 2.4.1] gi|123591492|sp|Q3J0W9|TYSY_RHOS4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|77388380|gb|ABA79565.1| thymidylate synthase [Rhodobacter sphaeroides 2.4.1] Length = 298 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 127/293 (43%), Positives = 175/293 (59%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDLL ++ G R DRTGVGT S FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 6 QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSGGQVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L + V IW +W A + GELGP Sbjct: 66 WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEEISQAAFEQRVLEDEAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG+ DQI++++++LR +P SRR + AWNVA + +MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWLGPDGHEHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS D+ LG PFN + L +M+A G G+ + GD HLY N Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q R+PR P+M + + +R EDF + Y+PH AI A+V+V Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298 >gi|221639818|ref|YP_002526080.1| Thymidylate synthase [Rhodobacter sphaeroides KD131] gi|221160599|gb|ACM01579.1| Thymidylate synthase [Rhodobacter sphaeroides KD131] Length = 298 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 127/293 (43%), Positives = 175/293 (59%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDLL ++ G R DRTGVGT S FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 6 QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSGGQVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L + V IW +W A + GELGP Sbjct: 66 WFLAGGTNIRPLLQENVRIWSDWPLAAYRRESGEQISQAAFEQRILEDEAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG+ DQI++++++LR +P SRR + AWNVA + +MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWLGPDGHEHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS D+ LG PFN + L +M+A G G+ + GD HLY N Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q R+PR P+M + + +R EDF + Y+PH AI A+V+V Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298 >gi|332558834|ref|ZP_08413156.1| thymidylate synthase [Rhodobacter sphaeroides WS8N] gi|332276546|gb|EGJ21861.1| thymidylate synthase [Rhodobacter sphaeroides WS8N] Length = 298 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 127/293 (43%), Positives = 174/293 (59%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDLL ++ G R DRTGVGT S FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 6 QQYLDLLTQTLERGDRRVDRTGVGTLSLFGAMLRFDLSDGQVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L + V IW +W A + GELGP Sbjct: 66 WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEQISQAAFEQRILEDEAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI++++++LR +P SRR + AWNVA + +MALPPCH ++Q+ Sbjct: 126 VYGRQWRRWLGPDGREHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS D+ LG PFN + L +M+A G G+ + GD HLY N Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWMGGDTHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q R+PR P+M + + +R EDF + Y+PH AI A+V+V Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298 >gi|254670154|emb|CBA05192.1| Thymidylate synthase [Neisseria meningitidis alpha153] Length = 189 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 115/191 (60%), Positives = 139/191 (72%), Gaps = 10/191 (5%) Query: 74 RHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 R + WD + +G +GP DG IDQI+++V+ ++ +P SRR IVSAW Sbjct: 9 RTKTATWDRFTATNGAVGPAP----------DGRHIDQIANVVEQIKKNPDSRRLIVSAW 58 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G Sbjct: 59 NPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTMMMAQVCG 118 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD HLY NHFEQA+LQL R PRTLP M INP + DL SF++EDF L Y+ Sbjct: 119 LEAGEFIHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLFSFKFEDFELEGYD 178 Query: 254 PHAAILAKVSV 264 PH I A VSV Sbjct: 179 PHPHIKAAVSV 189 >gi|126462805|ref|YP_001043919.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17029] gi|171855224|sp|A3PLD1|TYSY_RHOS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|126104469|gb|ABN77147.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17029] Length = 298 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 127/293 (43%), Positives = 174/293 (59%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDLL ++ G R DRTGVGT S FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 6 QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSDGQVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G +N+ L + V IW +W A + GELGP Sbjct: 66 WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEEISQAAFEQRILEDEAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI++++++LR +P SRR + AWNVA + +MALPPCH ++Q+ Sbjct: 126 VYGRQWRRWLGPDGREHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS D+ LG PFN + L +M+A G G+ + GD HLY N Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q R+PR P+M + + +R EDF + Y+PH AI A+V+V Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRQADGIDDYRIEDFAVEGYDPHPAIAAEVAV 298 >gi|224103383|ref|XP_002313034.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa] gi|222849442|gb|EEE86989.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa] Length = 414 Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 125/281 (44%), Positives = 165/281 (58%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L++ +I G+ + R G GT S FG QMRF+L K FP LTTKKV W+ VV ELLWF+ Sbjct: 134 YLRLVQDIITDGNLKDGRAGTGTLSKFGCQMRFNLRKTFPFLTTKKVFWRGVVEELLWFI 193 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103 G +N L G+ IWD A +D G+LGP YG QWR + D Sbjct: 194 SGSTNAKVLQEKGIHIWDGNASRDYLDSVGLKDREEGDLGPFYGFQWRHFGARYTDMHAD 253 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ +R +P R ++SAWN + M LPPCH QFYV NG+LSCQ+ Sbjct: 254 YTGQGFDQLLDVIDKIRNNPNDRGIVLSAWNPTDLKLMVLPPCHMFVQFYVANGELSCQM 313 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PF+IASY+LLT ++A V G+FIH +GD H+Y+ H QL + Sbjct: 314 YQRSADMGLGVPFSIASYALLTHIIAHVCDLVPGDFIHVIGDAHVYHTHIRPLQEQLHKL 373 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + IN D+ SF DF L Y+PH I K++V Sbjct: 374 PKPFPILKINSEKKDIDSFVAADFELIGYDPHQKIEMKMAV 414 >gi|213409892|ref|XP_002175716.1| thymidylate synthase [Schizosaccharomyces japonicus yFS275] gi|212003763|gb|EEB09423.1| thymidylate synthase [Schizosaccharomyces japonicus yFS275] Length = 619 Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 134/295 (45%), Positives = 177/295 (60%), Gaps = 32/295 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL++ +++ G R DRTG GTRS F Q+RF LS PLLTTKKV + V+ EL Sbjct: 325 QQYLDLIKRILETGELRNDRTGTGTRSIFAPPQLRFSLSNNTLPLLTTKKVFLRGVLQEL 384 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------ 101 LWFLRGD+N +L + IWD E+ DK +G+LGP+YG QWR + Sbjct: 385 LWFLRGDTNAKHLTEKDIHIWDGNGSREFLDKMGFFDRAEGDLGPVYGFQWRHFGAKYTD 444 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ++ +V L+ +P RR I+SAWN A I +MALPPCH L QFYV Sbjct: 445 CNADYTGQGVDQLAQVVHQLKNNPNDRRIIMSAWNPAAIPQMALPPCHLLCQFYVSAPAQ 504 Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 +LSC +YQRS D+ LG+PFNIASYSLLT MLA ++ EFIH +GD H+Y +H Sbjct: 505 PGGRPRLSCMMYQRSADMGLGVPFNIASYSLLTHMLAHYCNYEAHEFIHVMGDCHIYIDH 564 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264 E QL+R P P++ + ++ S + Y+DF + Y P I K+SV Sbjct: 565 IEALRTQLARKPLPFPKIHFRRSPREVGSIDGYEYDDFVVEGYNPWGPIKMKMSV 619 >gi|260950885|ref|XP_002619739.1| thymidylate synthase [Clavispora lusitaniae ATCC 42720] gi|238847311|gb|EEQ36775.1| thymidylate synthase [Clavispora lusitaniae ATCC 42720] Length = 317 Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 136/308 (44%), Positives = 177/308 (57%), Gaps = 45/308 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 YLDL + +I+ G R DRTG GTRS F Q+RFDLS FPLLTTK+V K ++HEL Sbjct: 10 QAYLDLCQKIIEEGEFRPDRTGTGTRSLFAPPQLRFDLSNDTFPLLTTKRVFSKGIIHEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------ 101 LWF+ G ++ L GV IW+ E+ DK +G+LGP+YG QWR + Sbjct: 70 LWFVEGCTDAKKLSAKGVRIWEGNGSREYLDKMGLTDRREGDLGPVYGFQWRHFGAEYKT 129 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ+ +++ L+ +PY RR I+SAWN KMALPPCH QFYV Sbjct: 130 CDDDYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFCQFYVSFPQP 189 Query: 156 ---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+ GEFI Sbjct: 190 SSPEPYAPKSTKSQARPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFI 249 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL----SFRYEDFTLRSYEPHA 256 HTLGD H+Y +H + QL R+P+ P++ I + D + F ++DF + YEP Sbjct: 250 HTLGDAHVYLDHIDALKTQLERTPKQFPKLFIKESRKDEIRSIDDFTFDDFEIVGYEPLP 309 Query: 257 AILAKVSV 264 AI +SV Sbjct: 310 AIKMNMSV 317 >gi|1480449|gb|AAC47229.1| bifunctional dihydrofolate reductase-thymidylate synthase [Cryptosporidium parvum] Length = 499 Score = 244 bits (624), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 122/261 (46%), Positives = 169/261 (64%), Gaps = 21/261 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV +S+ EL+WF Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102 ++GD+N ++L V IW E+ ++ G +LGPIYG QWR + Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478 Query: 222 RSPRTLPQMIINPNIVDLLSF 242 R+PR PQ+ + ++ F Sbjct: 479 RTPRPFPQLKFKRKVENIEDF 499 >gi|321468900|gb|EFX79883.1| hypothetical protein DAPPUDRAFT_319193 [Daphnia pulex] Length = 255 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/243 (48%), Positives = 156/243 (64%), Gaps = 20/243 (8%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGE 89 FPLLTTK+V W+ ++ ELLWF+RG +N + L + IWD E+ D ++G Sbjct: 13 FPLLTTKRVFWRGLMEELLWFVRGSTNANKLREKDIHIWDGNSSREFLDSLGLKDREEGG 72 Query: 90 LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGPIYG QWR + DY +DQ+ +++ ++R +P RR I++AWN + + M Sbjct: 73 LGPIYGFQWRHFGANYDNMHSDYSCQGVDQLKNLINTIRTNPDDRRMILTAWNPSALPLM 132 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 ALPPCHCL QFYV NG+LSCQ+YQRS DV LG+PFNIASYSLLT M+A V G GEFIH Sbjct: 133 ALPPCHCLAQFYVANGELSCQMYQRSADVGLGVPFNIASYSLLTCMIARVTGLNPGEFIH 192 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 TLGD H+YNNH + QL R PR P + I + D+ F+ +DF L Y+PH I Sbjct: 193 TLGDAHVYNNHISALEKQLERQPRPFPTLKIIRKVSDIDDFKADDFVLEGYDPHPKIPMD 252 Query: 262 VSV 264 ++V Sbjct: 253 MAV 255 >gi|328771286|gb|EGF81326.1| hypothetical protein BATDEDRAFT_10605 [Batrachochytrium dendrobatidis JAM81] Length = 333 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 137/311 (44%), Positives = 175/311 (56%), Gaps = 49/311 (15%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL+R +I G R+DRTG GT S F Q+RF L+ PLLTTK+ + V EL+ Sbjct: 23 QYLDLVRQIIGTGDLRKDRTGTGTLSLFAPPQLRFSLADNTLPLLTTKRTFLRPVFEELM 82 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------- 101 WF+RG ++ L GV IWD E D+ +G+LGPIYG QWR + Sbjct: 83 WFIRGQTDSKILAGKGVHIWDANGSREALDRAGLGHRQEGDLGPIYGFQWRHFGASYENA 142 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG--- 157 DY G IDQ+ +++ L ++P RR I+SAWN I MALPPCH L Q YV Sbjct: 143 DTDYTGKGIDQLEKVIEQLVSNPTDRRIILSAWNPLAIPDMALPPCHILAQLYVSTPSET 202 Query: 158 ----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 +LSCQLYQRS D+ LG+PFNIASYSLLT+MLA V GF+ GEFIH LGD H+Y NH Sbjct: 203 HPVPRLSCQLYQRSCDMGLGVPFNIASYSLLTIMLAHVCGFEPGEFIHCLGDTHVYCNHI 262 Query: 214 EQADLQLSRSPRTLPQMIINPN--------------------IVDLLSFRYEDFTLRSYE 253 + QL R+PR P++ I N + ++ +F YE + Y Sbjct: 263 DALQTQLERTPRPFPKIFIKRNDTGTQSSDTVESTAQKVARLVREMETFEYEHIDVVGYT 322 Query: 254 PHAAILAKVSV 264 PH I +SV Sbjct: 323 PHNKIAMDMSV 333 >gi|331242472|ref|XP_003333882.1| thymidylate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309312872|gb|EFP89463.1| thymidylate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 306 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 128/293 (43%), Positives = 178/293 (60%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +QYL+L+RHVI G R DRTG GTRS F Q+RF LS PL+TTKKVH KS++HEL Sbjct: 14 YQYLNLIRHVIHHGQLRPDRTGTGTRSCFAPQQLRFTLSDSTLPLITTKKVHTKSIIHEL 73 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+R ++ L GV IWD + G LGPIYG QWR + Sbjct: 74 LWFIRASTSTQDLSAAGVRIWDPNGSRSYLDSVGLKEYETGTLGPIYGFQWRHFGASYQG 133 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ+ +++ S+ P RR I++AWN A + +MALPPCH + QFYV Sbjct: 134 PNHDYSGQGVDQLKNLIDSIINRPTDRRMILTAWNPAALHEMALPPCHMMCQFYVTLPDE 193 Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 +LS LYQRS D+ LG+PFNI SY+LL M+A V + E + LGD H+Y+NH Sbjct: 194 DHPKPRLSAILYQRSADLGLGLPFNITSYALLVHMIAQVTKTEPFELVIQLGDAHVYSNH 253 Query: 213 FEQ-ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +++QL+R+P P++ +NP++ D+ F++EDF + Y PH + ++SV Sbjct: 254 IKPLSEVQLTRTPNPFPKIKLNPSVTDIDHFKFEDFQILDYSPHPRVEMEMSV 306 >gi|325120559|emb|CBZ56113.1| Bifunctional dihydrofolate reductase-thymidylate synthase, related [Neospora caninum Liverpool] Length = 690 Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 134/334 (40%), Positives = 178/334 (53%), Gaps = 72/334 (21%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL+ +I G+ DRTGVG S FG MRF L K FPLLTTK+V WK V+ ELLWF Sbjct: 357 QYLDLIADIINNGATMDDRTGVGVISKFGCTMRFSLDKAFPLLTTKRVFWKGVLEELLWF 416 Query: 63 LRGDSNVSYLHRHGVS-------------------------------------------- 78 +RGD+N ++L GV Sbjct: 417 IRGDTNANHLSEKGVKASLQAPLLSFRLLRRLGAFLRGVTPPRLHAYIECTRLSSRPSAA 476 Query: 79 -----IWDEWADKD------------GELGPIYGVQWRSW--------PDYDGNVIDQIS 113 IWD+ ++ G++GP YG QWR + DY G +DQ+ Sbjct: 477 FAGPRIWDKNVTREFLDSRNLSHREVGDIGPGYGFQWRHFGATYKDMHTDYTGQGVDQLK 536 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSCQLYQRSGDVFL 172 ++ LR +P RR +++AWN A +D+MALPPCH L QFYV+N + LSC +YQRS DV L Sbjct: 537 KVINMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVENDRDLSCVMYQRSCDVGL 596 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP--QM 230 G+PFNIASYSLLT+M+A V + EFIH +G+ H+Y+NH E QL R PR P + Sbjct: 597 GVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYSNHVEALKEQLRREPRPFPIVNI 656 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + I ++ F EDF + Y PH I +++V Sbjct: 657 LNKERIQEIDDFTAEDFEVVGYVPHGRIQMEMAV 690 >gi|87199994|ref|YP_497251.1| thymidylate synthase [Novosphingobium aromaticivorans DSM 12444] gi|87135675|gb|ABD26417.1| thymidylate synthase [Novosphingobium aromaticivorans DSM 12444] Length = 316 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 131/301 (43%), Positives = 174/301 (57%), Gaps = 39/301 (12%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL+R + + G +R DRTGVGTRS FG ++RFDLS G PLLTTK+V+WK+ E LW Sbjct: 16 QYLDLMRRIWEHGDERVDRTGVGTRSVFGAELRFDLSDGRMPLLTTKRVYWKTATREFLW 75 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------ADKD---------------GELGPI 93 FL G++N+ L GV IW +W + KD G+LGP+ Sbjct: 76 FLTGNTNIRPLCAQGVEIWTDWPLDRYRKETGDDISRKDFSARIVADEAFALRWGDLGPV 135 Query: 94 YGVQWRSWPDY----DG------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 YG QW WP + DG ++Q++ +V SLR +P SRRHI+ WNVA ID+MAL Sbjct: 136 YGKQWVDWPVFEPVGDGLFRRREAGVNQVADVVDSLRHNPGSRRHIIEGWNVAEIDRMAL 195 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 PPCH +QF+V +L+ LYQRS DV LG+PFN+ +LL +LA Q GE + Sbjct: 196 PPCHKTYQFHVSGNRLNGLLYQRSCDVALGLPFNLWGAALLVRLLAQQCDLQPGELVWMG 255 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 GD HLY NH + + QLSR P P++ I + +R EDF + Y P + A V+ Sbjct: 256 GDTHLYLNHADLVEAQLSREPEGDPRLAILRRPDSIFGYRIEDFEVTGYAPQGHLSAPVA 315 Query: 264 V 264 V Sbjct: 316 V 316 >gi|224471862|sp|Q2G6V6|TYSY_NOVAD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 314 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 131/301 (43%), Positives = 174/301 (57%), Gaps = 39/301 (12%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL+R + + G +R DRTGVGTRS FG ++RFDLS G PLLTTK+V+WK+ E LW Sbjct: 14 QYLDLMRRIWEHGDERVDRTGVGTRSVFGAELRFDLSDGRMPLLTTKRVYWKTATREFLW 73 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------ADKD---------------GELGPI 93 FL G++N+ L GV IW +W + KD G+LGP+ Sbjct: 74 FLTGNTNIRPLCAQGVEIWTDWPLDRYRKETGDDISRKDFSARIVADEAFALRWGDLGPV 133 Query: 94 YGVQWRSWPDY----DG------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 YG QW WP + DG ++Q++ +V SLR +P SRRHI+ WNVA ID+MAL Sbjct: 134 YGKQWVDWPVFEPVGDGLFRRREAGVNQVADVVDSLRHNPGSRRHIIEGWNVAEIDRMAL 193 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 PPCH +QF+V +L+ LYQRS DV LG+PFN+ +LL +LA Q GE + Sbjct: 194 PPCHKTYQFHVSGNRLNGLLYQRSCDVALGLPFNLWGAALLVRLLAQQCDLQPGELVWMG 253 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 GD HLY NH + + QLSR P P++ I + +R EDF + Y P + A V+ Sbjct: 254 GDTHLYLNHADLVEAQLSREPEGDPRLAILRRPDSIFGYRIEDFEVTGYAPQGHLSAPVA 313 Query: 264 V 264 V Sbjct: 314 V 314 >gi|294506312|ref|YP_003570370.1| thymidylate synthase [Salinibacter ruber M8] gi|294342640|emb|CBH23418.1| thymidylate synthase [Salinibacter ruber M8] Length = 294 Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 130/296 (43%), Positives = 174/296 (58%), Gaps = 34/296 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L+ ++ G+ DRTG GT FG Q+RFDL++GFPLLTTK+V + V ELL Sbjct: 1 MRQYLDYLQDILDHGTRHEDRTGTGTIRVFGRQLRFDLTEGFPLLTTKRVWMRGVTEELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFLRG++N+ L + GVSIW +W A++ G+LGP Sbjct: 61 WFLRGETNIQSLVQAGVSIWTDWPLQRYRDETGDEISQEAFEERIATDDAFAEQWGDLGP 120 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR + +G V DQI +V+ LR P+SRRH+VSAW+ A I+ ALPPCH FQ Sbjct: 121 VYGTQWRDFEGPEGRV-DQIERLVRGLRETPHSRRHVVSAWHPAQIEDAALPPCHYAFQC 179 Query: 153 YVD----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 +V+ +G+LS QRS D FLG+PFNIASY+LLT MLA G E I GD H+ Sbjct: 180 FVEGEPGDGRLSLMWQQRSVDSFLGLPFNIASYALLTRMLAQQAGLTPHELIFNGGDCHI 239 Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Y NH EQ + QL+R+P P + + + +D + YE H A+ A ++V Sbjct: 240 YQNHVEQVEEQLTRTPYDRPTLRLRQRD-SIFEHAADDVAIEDYEHHPALTAPIAV 294 >gi|224471864|sp|Q1GTH6|TYSY_SPHAL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 311 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 135/302 (44%), Positives = 177/302 (58%), Gaps = 40/302 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHELLW 61 QYLDL+R + G +R DRTGVGTRS FG MRF L PLLTTK+V+WK+ + ELLW Sbjct: 10 QYLDLMRRIWVDGDERVDRTGVGTRSLFGETMRFSLKDDAIPLLTTKRVYWKTALRELLW 69 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-----------------------ADKD-----GELGPI 93 FL GD+N+ L GV IW +W AD D G+LGP+ Sbjct: 70 FLTGDTNIRPLVAQGVKIWTDWPLEKYRKATGEAISATDFEARIVADADFAAKWGDLGPV 129 Query: 94 YGVQWRSWPDYD---GNVI-------DQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 YG QW +WP Y+ G + +QI++++ SL+ +P SRRHI + WNVA +D+MAL Sbjct: 130 YGHQWVNWPRYEPAGGGLFRRADHGYNQIAALIDSLKNNPGSRRHIFTGWNVADLDRMAL 189 Query: 144 PPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 PPCH +QF+V +G LSC L+QRS D+ LG FNI +LLT M+A G E + T Sbjct: 190 PPCHMTYQFHVRSDGGLSCLLFQRSCDLGLGFAFNIFEAALLTRMVAEQCGLYAHEVVWT 249 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 GDVHLY NH E + QL+R P P++ I + +R+EDF + Y P A I A V Sbjct: 250 GGDVHLYLNHAELVEQQLARVPEGKPRLRILRRPPSIFEYRFEDFVVEDYAPQAHISAPV 309 Query: 263 SV 264 +V Sbjct: 310 AV 311 >gi|103486818|ref|YP_616379.1| thymidylate synthase [Sphingopyxis alaskensis RB2256] gi|98976895|gb|ABF53046.1| thymidylate synthase [Sphingopyxis alaskensis RB2256] Length = 320 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 135/302 (44%), Positives = 177/302 (58%), Gaps = 40/302 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHELLW 61 QYLDL+R + G +R DRTGVGTRS FG MRF L PLLTTK+V+WK+ + ELLW Sbjct: 19 QYLDLMRRIWVDGDERVDRTGVGTRSLFGETMRFSLKDDAIPLLTTKRVYWKTALRELLW 78 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-----------------------ADKD-----GELGPI 93 FL GD+N+ L GV IW +W AD D G+LGP+ Sbjct: 79 FLTGDTNIRPLVAQGVKIWTDWPLEKYRKATGEAISATDFEARIVADADFAAKWGDLGPV 138 Query: 94 YGVQWRSWPDYD---GNVI-------DQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 YG QW +WP Y+ G + +QI++++ SL+ +P SRRHI + WNVA +D+MAL Sbjct: 139 YGHQWVNWPRYEPAGGGLFRRADHGYNQIAALIDSLKNNPGSRRHIFTGWNVADLDRMAL 198 Query: 144 PPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 PPCH +QF+V +G LSC L+QRS D+ LG FNI +LLT M+A G E + T Sbjct: 199 PPCHMTYQFHVRSDGGLSCLLFQRSCDLGLGFAFNIFEAALLTRMVAEQCGLYAHEVVWT 258 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 GDVHLY NH E + QL+R P P++ I + +R+EDF + Y P A I A V Sbjct: 259 GGDVHLYLNHAELVEQQLARVPEGKPRLRILRRPPSIFEYRFEDFVVEDYAPQAHISAPV 318 Query: 263 SV 264 +V Sbjct: 319 AV 320 >gi|83816568|ref|YP_444564.1| thymidylate synthase [Salinibacter ruber DSM 13855] gi|83757962|gb|ABC46075.1| thymidylate synthase [Salinibacter ruber DSM 13855] Length = 355 Score = 241 bits (616), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 130/296 (43%), Positives = 174/296 (58%), Gaps = 34/296 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L+ ++ G+ DRTG GT FG Q+RFDL++GFPLLTTK+V + V ELL Sbjct: 62 MRQYLDYLQDILDHGTRHEDRTGTGTIRVFGRQLRFDLTEGFPLLTTKRVWMRGVTEELL 121 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFLRG++N+ L + VSIW +W A++ G+LGP Sbjct: 122 WFLRGETNIQSLVQADVSIWTDWPLQRYRDETGDEISQEAFEERIATDDAFAERWGDLGP 181 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR + +G V DQI +V+ LR P+SRRH+VSAW+ A I+ ALPPCH FQ Sbjct: 182 VYGTQWRDFEGPEGRV-DQIERLVRGLRETPHSRRHVVSAWHPAQIEDAALPPCHYAFQC 240 Query: 153 YVD----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 +V+ +G+LS QRS D FLG+PFNIASY+LLT MLA G E I GD H+ Sbjct: 241 FVEGEPGDGRLSLMWQQRSVDSFLGLPFNIASYALLTRMLAQQAGLTPHELIFNGGDCHI 300 Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Y NH EQ + QL+R+P P + + + +D T+ YE H A+ A ++V Sbjct: 301 YQNHVEQVEEQLTRTPYDRPTLRLR-QRDSIFEHAADDVTIEDYEHHPALTAPIAV 355 >gi|328862602|gb|EGG11703.1| hypothetical protein MELLADRAFT_51590 [Melampsora larici-populina 98AG31] Length = 302 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 130/292 (44%), Positives = 172/292 (58%), Gaps = 29/292 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 HQYLDL+R VI G R DRTG GTRS F Q+RF L+ PLLTTKKV K+++HEL Sbjct: 11 HQYLDLVRRVIDQGQHRPDRTGTGTRSLFAPPQLRFTLTDSTLPLLTTKKVFTKAIIHEL 70 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------ 101 LWF++G ++ L GV+IW+ K +G+LGPIYG QWR + Sbjct: 71 LWFIKGSTSSLDLSSKGVNIWNGNGSKKYLESIGLDQRSEGDLGPIYGFQWRHFGARYKT 130 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY IDQ+ ++ ++++P RR I++AWN + + KMALPPCH QFYV Sbjct: 131 FQDDYTDQGIDQLKECIEKIKSNPTDRRIILTAWNPSDLSKMALPPCHMFCQFYVTLADD 190 Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 +LSC LYQRS D+ LG+PFNIASY+LL M++ V + E I LGD HLYN+H Sbjct: 191 QNPKPRLSCILYQRSADIGLGLPFNIASYALLVHMISQVTSTEPYELIIQLGDAHLYNDH 250 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R PR P++ + + D+ F YEDF + Y+PH I +SV Sbjct: 251 LGPIQTQLDRQPRPFPKIKLREQVHDIDGFVYEDFQISEYDPHPKIEMAMSV 302 >gi|227822598|ref|YP_002826570.1| thymidylate synthase [Sinorhizobium fredii NGR234] gi|254790247|sp|C3MEE8|TYSY_RHISN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|227341599|gb|ACP25817.1| thymidylate synthase [Sinorhizobium fredii NGR234] Length = 305 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 128/299 (42%), Positives = 174/299 (58%), Gaps = 36/299 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLDL+ +++ G R DRTG GT S FG QMRF LS G P+ TTKKV+WK+ V E+L Sbjct: 7 YQYLDLMSELLETGDRRMDRTGEGTLSLFGKQMRFKLSDGTIPIFTTKKVYWKTSVKEML 66 Query: 61 WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92 WFL G +N+S L R V IW DE+A + G+LGP Sbjct: 67 WFLTGQTNISSLLRENVRIWTDWPLAKYRKATGETISQEQFEDRIVASDEFASEWGDLGP 126 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W D DG DQI++++ +L+ +P SRR + AWNV +D+MAL PCH +QF Sbjct: 127 VYGKQWRRWVDNDGQEHDQIATVISTLKTNPTSRRILFHAWNVGELDRMALHPCHMTYQF 186 Query: 153 YVD--NG-----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 +V NG +LS ++QRS D+FLG PFNI ++L M+A + GE + GD Sbjct: 187 HVSWPNGQDGRPQLSMMVHQRSCDIFLGAPFNICQQAVLLAMIAQQVDMDRGELVWLGGD 246 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 HLY NH +QA LQLSR P+ P++ I + + +DF + Y+ H I A V+V Sbjct: 247 THLYLNHLDQARLQLSRKPKPFPKLEIKRRPASIDGYTIDDFEVSEYQSHERIEAPVAV 305 >gi|299779177|ref|YP_003734371.1| dTMP thymidylate synthase [Enterobacteria phage IME08] gi|298105906|gb|ADI55550.1| dTMP thymidylate synthase [Enterobacteria phage IME08] Length = 289 Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 130/292 (44%), Positives = 175/292 (59%), Gaps = 33/292 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L++ +++ G + DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL Sbjct: 3 MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 62 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G +IWDE + DGELGP+YG QWR D+ Sbjct: 63 WFLSGSTNVNDLRERTHGSRTEGKTIWDENYENQAISLGYSDGELGPVYGKQWR---DFG 119 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G IDQ+ IV+ ++ P RR IVSAWN A I+KMALPPCHC +QF V NG L Q YQ Sbjct: 120 G--IDQVVEIVERIKKMPNDRRQIVSAWNPAEINKMALPPCHCFYQFNVRNGHLDLQWYQ 177 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ + + G+ H+Y+NH EQ L R P+ Sbjct: 178 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 237 Query: 226 TLPQMII------------NPNIVDLLSFRY-EDFTLRSYEPHAAILAKVSV 264 L ++ I + + Y EDF L+ YE H I AK++V Sbjct: 238 ELCELEIRYWHKDFHEWTTEQQLAWVTGMMYPEDFVLKGYESHPTIKAKMAV 289 >gi|302852458|ref|XP_002957749.1| hypothetical protein VOLCADRAFT_68527 [Volvox carteri f. nagariensis] gi|300256925|gb|EFJ41181.1| hypothetical protein VOLCADRAFT_68527 [Volvox carteri f. nagariensis] Length = 294 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 129/288 (44%), Positives = 170/288 (59%), Gaps = 27/288 (9%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLLRHV++ G R DRTG GT S FG Q+RFD+S P+LTTKKV W+ V+ ELLWF+ Sbjct: 7 YLDLLRHVLECGEPREDRTGTGTLSVFGRQLRFDISDCVPVLTTKKVAWQKVIQELLWFM 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW---------P 102 RGD++ + L R GV +WD + + +G++G YG QWR + P Sbjct: 67 RGDTDAAILQRDGVRVWDGNSSRAFLDARGLRHLPEGDIGAGYGHQWRRFGSPYVDCKTP 126 Query: 103 DYDG---NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GK 158 G +DQ+ ++ LR +P SRR +SAWN +DKMALPPCH QFY D G Sbjct: 127 PRQGAEAGGVDQLQFVLDELRRNPSSRRIFMSAWNPCDLDKMALPPCHVSAQFYADRAGG 186 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC +YQRS DVFLG P+NI SYS+LT +LA+ G + E I + GD H+Y NH Q Sbjct: 187 LSCHMYQRSVDVFLGFPWNILSYSVLTYILAAKAGLKPKELIISTGDTHIYANHVGQVRT 246 Query: 219 QLSRSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL+R P P++ ++P + EDF + Y H I A +SV Sbjct: 247 QLARQPFAWPRLELSPAVAAKAFEDITLEDFRMVGYTSHPYIRADMSV 294 >gi|66392008|ref|YP_238933.1| dTMP (thymidylate) synthase [Aeromonas phage 31] gi|62114845|gb|AAX63693.1| td [Aeromonas phage 31] Length = 279 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 128/281 (45%), Positives = 172/281 (61%), Gaps = 19/281 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+ VI G + DRTGVGTRS FG +RFDLSKGFP +T K++ WKSVV ELL Sbjct: 1 MIQYKDLVEDVIANGRRKTDRTGVGTRSVFGRMLRFDLSKGFPAVTCKQLAWKSVVGELL 60 Query: 61 WFLRGDSNVSYLHR--HGV-----SIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WF+ G +NV +L R HG +IWD ++ G LGP+YG QWR + + Sbjct: 61 WFISGSTNVDHLRRITHGPNSDKRTIWDANYEEQAINLGYSGGYLGPVYGKQWRQFGN-- 118 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 N +DQ+ ++ ++++P SRR +V AWN ID MALPPCH FQF V GKLS Q Sbjct: 119 KNPVDQLQKVIDQIKSNPDSRRLLVVAWNPEDIDAMALPPCHFAFQFEVYEGKLSLMWSQ 178 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DV LG+PFNIASY+LL ++A + G + GE + + DVH+Y NH + RSPR Sbjct: 179 RSVDVGLGLPFNIASYALLVHIIAGICGLEVGELVFSGADVHVYENHVDDLVEIFCRSPR 238 Query: 226 TLPQMIIN--PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP++ N+ +L + +D+ L Y+PH I ++V Sbjct: 239 PLPKLAYYDVANLAELRTMTVDDYVLTEYDPHPPIKMPMAV 279 >gi|295657856|ref|XP_002789493.1| thymidylate synthase [Paracoccidioides brasiliensis Pb01] gi|226283762|gb|EEH39328.1| thymidylate synthase [Paracoccidioides brasiliensis Pb01] Length = 360 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 135/315 (42%), Positives = 179/315 (56%), Gaps = 54/315 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-GF----------PLLTTKK 49 HQYL+L+R ++ G +R DRTG GTRS F Q+RF LSK GF PLLTTK+ Sbjct: 48 HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGFSSPSSRTPILPLLTTKR 107 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Q Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSEAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167 Query: 98 WR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH Sbjct: 168 WRYFGAEYIDAQTDYTGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227 Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 QFYV G LSCQLYQRS D+ LG+PFNIASY+LLT MLA Sbjct: 228 AQFYVSFPSHGGNSEGGYEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTL 249 G IHT+GD H+Y +H E QL R P P+++I ++D ++ E+F + Sbjct: 288 YPGTLIHTMGDAHVYLDHIEALQEQLKREPVDFPELVIKRDDRGSGVMD--GWKEEEFEV 345 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I K+S+ Sbjct: 346 VGYKPHKGIKMKMSI 360 >gi|161622629|ref|YP_001595355.1| dTMP thymidylate synthase [Enterobacteria phage JS98] gi|52139835|gb|AAU29207.1| dTMP thymidylate synthase [Enterobacteria phage JS98] Length = 285 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 130/290 (44%), Positives = 176/290 (60%), Gaps = 31/290 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L++ +++ G + DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G +IWDE + KD GELGP+YG QWR D+ Sbjct: 61 WFLSGSTNVNDLRFRTHGSLIDGKTIWDENYENQAKDLGYHSGELGPVYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQ+ I+ ++ P RR IVSAWN A ID+MALPPCHC +QF V NG L Q YQ Sbjct: 118 G--VDQVVEIIDRIKKMPNDRRQIVSAWNPAEIDQMALPPCHCFYQFNVRNGHLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ + + G+ H+Y+NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 235 Query: 226 TLPQMIINPNIVDLL-----------SFRYEDFTLRSYEPHAAILAKVSV 264 L ++ IN +L S + DF L+ YE H I AK++V Sbjct: 236 ELCELEINLPEEFILWDTKTQLSWVDSMKPSDFVLKGYESHPTIKAKMAV 285 >gi|296222342|ref|XP_002757145.1| PREDICTED: thymidylate synthase-like isoform 2 [Callithrix jacchus] Length = 279 Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 120/274 (43%), Positives = 160/274 (58%), Gaps = 38/274 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHF--------- 142 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 + + + +D + MALPPCH L QFYV NG+LSCQLYQRSGD+ Sbjct: 143 --GAEYRDMDSD---------------LPLMALPPCHALCQFYVVNGELSCQLYQRSGDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R PR P++ Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I + + F+ EDF + Y PH I +++V Sbjct: 246 KILRKVEKIDDFKAEDFKVEGYNPHPTIKMEMAV 279 >gi|312262725|gb|ADQ53020.1| Td thymidylate synthetase [Aeromonas phage PX29] Length = 277 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 124/282 (43%), Positives = 172/282 (60%), Gaps = 23/282 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLD++++VI+ G D DRTGVGTRS G R D++ GFP +TTK + WK+V ELL Sbjct: 1 MKYYLDIMKYVIENGEDEMDRTGVGTRSILGQVFRHDMADGFPAVTTKTLAWKAVRGELL 60 Query: 61 WFLRGDSNVSYLH--RHGV-----SIWDEWAD--------KDGELGPIYGVQWRSWPDYD 105 WF+ G +NV L +GV +IWD+ + DG+LGP+YG QWR D Sbjct: 61 WFMNGFTNVEVLRAMTYGVGSSTKTIWDDNFNHQGVALGYTDGDLGPVYGKQWR-----D 115 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 N +DQ++ ++ ++ +P RR+IV AWN A +DKMALPPCH LF+F V G+L+ YQ Sbjct: 116 FNGVDQLAKAIERIKTNPECRRNIVCAWNPADLDKMALPPCHVLFRFSVKRGRLNLTWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D+ LGIPFNIASY LL M+A + G++ G D H+Y+NHF+Q QL R P Sbjct: 176 RSCDLLLGIPFNIASYGLLLEMVAHITGYKAGILTGMFDDAHIYHNHFDQVQEQLQRVPY 235 Query: 226 TLPQMIINPNIVDL---LSFRYEDFTLRSYEPHAAILAKVSV 264 LP+++ L + +D L Y+ H+AI A ++V Sbjct: 236 DLPKLVFKKRFTTLEEACNLSLDDIQLEDYKCHSAIKAPMAV 277 >gi|294661477|ref|YP_003579930.1| Td thymidylate synthetase [Klebsiella phage KP15] gi|292660638|gb|ADE34886.1| Td thymidylate synthetase [Klebsiella phage KP15] Length = 291 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 135/292 (46%), Positives = 178/292 (60%), Gaps = 29/292 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD+++ V+ G + DRTGVGT FG Q R+DL++GFP T KK+ +K HEL Sbjct: 1 MKQYLDIIKLVLDNGVESTDRTGVGTIRIFGAQARWDLNRGFPATTCKKLFFKPCKHELQ 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPD-- 103 WFL G +NV L R +IWD+ +K G LGPIYG QWRS+ Sbjct: 61 WFLSGSTNVEELRRMTWGENSDKRTIWDDNYEKQAIDLGYDSGYLGPIYGHQWRSFGSLY 120 Query: 104 ------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 Y G+ +DQI+ +++ L++ P R IVSAWN +D MAL PCHC FQF V NG Sbjct: 121 GDDDSYYGGSGVDQIAKVIEQLKSTPDDRGIIVSAWNPVDLDDMALRPCHCFFQFVVING 180 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 KLS Q YQRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N EQA Sbjct: 181 KLSLQWYQRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAVEQAK 240 Query: 218 --LQLSRSPRTLPQMIINPNIVDLLSFRYEDF---TLRSYEPHAAILAKVSV 264 LQ +RSP LP ++ P + LL E F TL Y H ++ A+++V Sbjct: 241 ELLQPNRSPMPLP-ILKMPKVNSLLDLDQEFFDSITLEGYHNHGSLKAEMAV 291 >gi|294011284|ref|YP_003544744.1| thymidylate synthase [Sphingobium japonicum UT26S] gi|292674614|dbj|BAI96132.1| thymidylate synthase [Sphingobium japonicum UT26S] Length = 311 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 128/302 (42%), Positives = 172/302 (56%), Gaps = 39/302 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHELL 60 QYLDL+RH+ G +R DRTGVGTRS G MRF L+ PLLTTK+V+WK E+L Sbjct: 10 QQYLDLMRHIWLHGDERIDRTGVGTRSILGATMRFSLADDAVPLLTTKRVYWKVAAREML 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------DKD----------------GELGP 92 WFL GD+N+ L R GV IW +W D+D G+LGP Sbjct: 70 WFLTGDTNIRELVRQGVHIWTDWPLDSYRKATGEEIDRDAFEARIVEDQAFAARWGDLGP 129 Query: 93 IYGVQWRSWPDYD--GNVI--------DQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 +YG QW +WP Y+ G+ + +QI+ +V+++R P SRR + + WNVA + +MA Sbjct: 130 VYGAQWVNWPRYEEVGDGLYRRAAQGHNQIADLVEAIRTSPGSRRLLFTGWNVAEVSRMA 189 Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 LPPCH +QF V NG+L+ L+QRS D+ LG FNI S++T MLA + GE + Sbjct: 190 LPPCHMTYQFQVANGRLNGLLFQRSCDLGLGFAFNIFGLSMITRMLAQQCDLEAGEIVWQ 249 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 GDVHLY NH E + Q+ R P P++ IN + +R EDF + Y P I A V Sbjct: 250 GGDVHLYLNHAELVEEQIGRIPSGSPKLRINRRPSSIFDYRIEDFEVADYAPQRHIAAPV 309 Query: 263 SV 264 +V Sbjct: 310 AV 311 >gi|312210825|emb|CBX90911.1| similar to thymidylate synthase [Leptosphaeria maculans] Length = 353 Score = 238 bits (606), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 137/307 (44%), Positives = 176/307 (57%), Gaps = 44/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGT-RSTFGYQMRFDLSKG-----------FPLLTTKK 49 +QYL L+R ++ G R DRTG GT + F QM+F LSK PLLTTK+ Sbjct: 47 YQYLSLIREILTNGEHRPDRTGTGTYAAPFPPQMKFALSKPSSDPSQPPIPILPLLTTKR 106 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD E+ D ++GELGP+YG Q Sbjct: 107 VFLRAVIGELLWFVAGSTHSKPLSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGFQ 166 Query: 98 WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G IDQI+ I+ L+ PY RR I+SAWN A I KMALPPCH Sbjct: 167 WRHFGAEYKGHDADYTGQGIDQIAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHMF 226 Query: 150 FQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 QFYV G L LYQRS D+ LG+PFNIASY+LLT MLA V G Sbjct: 227 AQFYVSFPGHKQGQERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPGT 286 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYEDFTLRSYEPHAA 257 F HT+GD H+Y +H E LQL R PR P++ IN I + ++ +DF + Y+PHA+ Sbjct: 287 FTHTMGDAHVYADHVEALKLQLQREPREFPELKINREIGGSIDGWKADDFEVVGYKPHAS 346 Query: 258 ILAKVSV 264 I K+SV Sbjct: 347 IAMKMSV 353 >gi|282174112|ref|YP_003358214.1| ORF75 [Anguillid herpesvirus 1] gi|281308955|gb|ADA57838.1| ORF75 [Anguillid herpesvirus 1] Length = 301 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 121/296 (40%), Positives = 177/296 (59%), Gaps = 35/296 (11%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTR-STFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 Y++ ++ ++ G +RRDRT VG+ FG+ R++L +GFPL TTK+V W++V EL+WF Sbjct: 6 YIEHVKSILTDGVERRDRTSVGSSLVKFGHMGRYNLRRGFPLFTTKRVFWRAVAEELIWF 65 Query: 63 LRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW--------P 102 L+G ++ L GV+IW + + D G +LGP+YG QWR W Sbjct: 66 LKGCTDGVKLAEKGVNIWRDNGTRSFLDSRGLTDHREHDLGPVYGFQWRHWGASYVGADA 125 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------- 155 +Y G DQI SI+ +L+A +RR ++SAWNV+ + KMALPPCH QF++D Sbjct: 126 EYSGQGHDQIQSILSNLKARNNNRRLLLSAWNVSDVPKMALPPCHLFAQFHIDFPAGYQH 185 Query: 156 -------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 +LSC YQRS D+ LG+PFN+ASY+LLT ++A + + GE IH++GD H+ Sbjct: 186 GTITETIKPRLSCLFYQRSADMGLGVPFNVASYALLTHIMAHLADLEVGELIHSIGDAHI 245 Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Y NH Q +LQ+ R R PQ+ INP + L +ED T+ Y PH I +++V Sbjct: 246 YTNHVAQLELQVKREIRPPPQLTINPRVKSLEDLTFEDLTITGYNPHPTIKMEMAV 301 >gi|325095325|gb|EGC48635.1| thymidylate synthase [Ajellomyces capsulatus H88] Length = 369 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 136/325 (41%), Positives = 178/325 (54%), Gaps = 64/325 (19%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46 HQYL L+R +++ G R DRTG GTRS F Q+RF LSK PLLT Sbjct: 47 HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+Y Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166 Query: 95 GVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 G QWR + DY G +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQITEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226 Query: 147 HCLFQFYVD----------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 H QFYV G LSCQLYQRS D+ LG+PFNIASY+LL Sbjct: 227 HMFAQFYVSFPAGDRDDGGEEGEEKNKTEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDL 239 T MLA + G IHT+GD H+Y +H E QL+R P P++II I+D Sbjct: 287 THMLAHAVDLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMD- 345 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++ E+F + Y+PH I K+SV Sbjct: 346 -GWKEEEFEVVGYKPHKGIKMKMSV 369 >gi|332225955|ref|XP_003262153.1| PREDICTED: thymidylate synthase-like [Nomascus leucogenys] Length = 251 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 115/247 (46%), Positives = 153/247 (61%), Gaps = 20/247 (8%) Query: 38 LSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD---------- 87 S FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D Sbjct: 5 FSDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTR 64 Query: 88 --GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 G+LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN Sbjct: 65 EEGDLGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRD 124 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G Sbjct: 125 LPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPG 184 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 +FIHTLGD H+Y NH E +QL R PR P++ I + + F+ EDF + Y PH Sbjct: 185 DFIHTLGDAHVYLNHIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPT 244 Query: 258 ILAKVSV 264 I +++V Sbjct: 245 IKMEMAV 251 >gi|37651687|ref|NP_932561.1| Td [Aeromonas phage 44RR2.8t] gi|34732987|gb|AAQ81524.1| dTMP (thymidylate) synthase [Aeromonas phage 44RR2.8t] Length = 279 Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 128/281 (45%), Positives = 172/281 (61%), Gaps = 19/281 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+ VI G + DRTGVGTRS FG +RFDLSKGFP +T K++ WKSVV ELL Sbjct: 1 MIQYKDLVEDVIANGRRKTDRTGVGTRSVFGRMLRFDLSKGFPAVTCKQLAWKSVVGELL 60 Query: 61 WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WF+ G +NV +L R HG +IWD ++ DG LGP+YG QWR + + Sbjct: 61 WFISGSTNVDHLRRITHGPNSDKRTIWDANYEEQAINLGYSDGYLGPVYGKQWRQFGN-- 118 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 N +DQ+ ++ ++++P SRR +V AWN ID MALPPCH FQF V GKLS Q Sbjct: 119 KNPVDQLQKVIDQIKSNPDSRRLLVVAWNPEDIDAMALPPCHFAFQFEVYEGKLSLMWSQ 178 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DV LG+PFNIASY+LL ++A + G + GE + + DVH+Y NH + R PR Sbjct: 179 RSVDVGLGLPFNIASYALLVHIIAGICGLEVGELVFSGADVHVYENHVDDLVEIFWRDPR 238 Query: 226 TLPQMIIN--PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP++ N+ +L + +D+ L Y+PH I ++V Sbjct: 239 PLPKLAYYDVANLAELRTMTVDDYVLTEYDPHPPIKMPMAV 279 >gi|310722567|ref|YP_003969390.1| dTMP synthase [Aeromonas phage phiAS5] gi|306021410|gb|ADM79944.1| dTMP synthase [Aeromonas phage phiAS5] Length = 277 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 124/282 (43%), Positives = 171/282 (60%), Gaps = 23/282 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL++ ++ G D DRTGVGTRS G ++FD++ GFP TTK + WK+V ELL Sbjct: 1 MKNYQDLMQDILTHGVDEMDRTGVGTRSVVGRMIQFDMADGFPATTTKTLAWKAVRGELL 60 Query: 61 WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WF+ G +NV L +GV +IWD+ + DGELGP+YG QWR D Sbjct: 61 WFMNGFTNVETLRTMTYGVGSSTKTIWDDNFNNQGVALGYTDGELGPVYGKQWR-----D 115 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 N +DQ++ ++ ++ +P RR+IVSAWN + MALPPCH LF+F V G+L+ YQ Sbjct: 116 FNGVDQLAKAIERIKTNPECRRNIVSAWNPVDLPHMALPPCHVLFRFSVKAGRLNLTWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D FLG+ FNIASY LL ++A + G++ G L DVH+YNNHFEQ QLSR P Sbjct: 176 RSVDTFLGLAFNIASYGLLLEIVAKITGYKAGLLTGMLDDVHVYNNHFEQVREQLSREPY 235 Query: 226 TLPQMIINPNIVDL---LSFRYEDFTLRSYEPHAAILAKVSV 264 LP+++ + L + +D L Y+ H+AI A ++V Sbjct: 236 ELPKLVFKKDFTTLEEACNLSVDDIQLEDYKCHSAIKAPMAV 277 >gi|326387810|ref|ZP_08209416.1| thymidylate synthase [Novosphingobium nitrogenifigens DSM 19370] gi|326207856|gb|EGD58667.1| thymidylate synthase [Novosphingobium nitrogenifigens DSM 19370] Length = 315 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 124/305 (40%), Positives = 168/305 (55%), Gaps = 42/305 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL+ + G +R DRTGVGTRS FG +RFDLS G PLLTTK+++WK+ E L Sbjct: 11 QQYLDLMARIWSHGDERIDRTGVGTRSIFGTTLRFDLSDGQVPLLTTKRIYWKTATREFL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92 WFL G++N+ L GV IW +W A + GELGP Sbjct: 71 WFLTGETNIRPLCAQGVEIWTDWPLDRYRRETGDRMTREDFSRRIVEDADFAARWGELGP 130 Query: 93 IYGVQWRSWPDYDGNV-------------IDQISSIVQSLRADPYSRRHIVSAWNVALID 139 +YG QW WP Y+ + I+Q++ +V+ LR +P RRHIV WNVA +D Sbjct: 131 VYGKQWTDWPVYEADAAAGAGLFRRRERGINQVAELVEGLRRNPGGRRHIVEGWNVAELD 190 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 MALPPCH +QF+V +G+LS +YQRS DV LG+PFN+ +L MLA GE Sbjct: 191 AMALPPCHKTYQFHVADGRLSGIVYQRSCDVALGLPFNLWGGALFIHMLAQQCDLLPGEL 250 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 + GD HLY NH + + QL+R P P++++ + + DFT+ Y P + Sbjct: 251 VWMGGDTHLYLNHGDLVEAQLARQPAGSPRLVLGRRPASIFDYEIGDFTVLDYHPQKHLA 310 Query: 260 AKVSV 264 A V+V Sbjct: 311 APVAV 315 >gi|255538724|ref|XP_002510427.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Ricinus communis] gi|223551128|gb|EEF52614.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Ricinus communis] Length = 591 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 121/280 (43%), Positives = 159/280 (56%), Gaps = 20/280 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL L +I G+ + DRTG GT S FG QM+++L K FPLLTTK+V W VV ELLW Sbjct: 306 YMYLRLAEQIISNGTLKDDRTGTGTLSKFGGQMQYNLRKSFPLLTTKRVFWMGVVEELLW 365 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+ G +N L G+ IWD A +D +LGPIYG QWR + Sbjct: 366 FISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKDIEESDLGPIYGFQWRYFGARYTDMH 425 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ +++ P R I+ +WN + + MA PPCH QFYV NG+LSC Sbjct: 426 ADYSGQGFDQLVDVIDKIKSKPDDRCIILRSWNPSDLKLMAFPPCHMFAQFYVANGELSC 485 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIA Y+LLT ++A V G+FIH +GD + H QL Sbjct: 486 QMYQRSADIGLGVPFNIAFYALLTCIIAHVCALVPGDFIHLIGDARVCTTHIGPLQKQLQ 545 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 + P P + INP D+ SF DF L Y+PH I K Sbjct: 546 KLPTPFPILRINPAKKDIDSFEASDFQLIGYDPHEYIDMK 585 >gi|114672495|ref|XP_001150304.1| PREDICTED: thymidylate synthase isoform 2 [Pan troglodytes] Length = 279 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 120/274 (43%), Positives = 159/274 (58%), Gaps = 38/274 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHF--------- 142 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 + + + +D + MALPPCH L QFYV N +LSCQLYQRSGD+ Sbjct: 143 --GAEYRDMESD---------------LPLMALPPCHALCQFYVVNSELSCQLYQRSGDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R PR P++ Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I + + F+ EDF + Y PH I +++V Sbjct: 246 KILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 279 >gi|18150851|dbj|BAB83677.1| thymidylate synthase [Homo sapiens] gi|119622121|gb|EAX01716.1| thymidylate synthetase, isoform CRA_a [Homo sapiens] Length = 279 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 120/274 (43%), Positives = 160/274 (58%), Gaps = 38/274 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHF--------- 142 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 + + + +D + MALPPCH L QFYV N +LSCQLYQRSGD+ Sbjct: 143 --GAEYRDMESD---------------LPLMALPPCHALCQFYVVNSELSCQLYQRSGDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R PR P++ Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I + + F+ EDF + Y PH I +++V Sbjct: 246 RILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 279 >gi|169784213|ref|XP_001826568.1| thymidylate synthase [Aspergillus oryzae RIB40] gi|238508715|ref|XP_002385543.1| thymidylate synthase [Aspergillus flavus NRRL3357] gi|83775313|dbj|BAE65435.1| unnamed protein product [Aspergillus oryzae] gi|220688435|gb|EED44788.1| thymidylate synthase [Aspergillus flavus NRRL3357] Length = 333 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 137/307 (44%), Positives = 176/307 (57%), Gaps = 46/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 29 HQYLNLIRTILASGEYRPDRTGTGTRSIFAPPQLRFSLSKPAPNPADDPIPVLPLLTTKR 88 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97 V ++VV ELLWF+ G ++ L GV IWD E+ DK G +LGP+YG Q Sbjct: 89 VFLRAVVAELLWFISGCTSSLPLSDQGVKIWDGNGSREFLDKVGLDHREVGDLGPVYGFQ 148 Query: 98 WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ +V L+ +P+ RR I+SAWN A + KMALPPCH Sbjct: 149 WRHFGAEYVDAKTDYTGQGVDQLAEVVHKLKNNPFDRRIIMSAWNPADLKKMALPPCHMF 208 Query: 150 FQFYVD-------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 QFYV G L CQLYQRS DV LG+PFNIASY+LLT M+A + G F+H Sbjct: 209 AQFYVSYPNGQDQKGHLHCQLYQRSCDVALGVPFNIASYALLTHMIAHAVDLHPGTFVHA 268 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMII-----NPNIVDLLSFRYEDFTLRSYEPHAA 257 +GD H+Y +H E QL R P P++ I +VD ++ EDF + Y PH A Sbjct: 269 MGDTHVYLDHVEPLQEQLVREPTEFPELKIRRDDRGSGVVD--GWKPEDFEVVGYNPHKA 326 Query: 258 ILAKVSV 264 I K+SV Sbjct: 327 IKMKMSV 333 >gi|302926083|ref|XP_003054223.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256735164|gb|EEU48510.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 326 Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 125/302 (41%), Positives = 173/302 (57%), Gaps = 39/302 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56 HQYLDL++ +++ G R DRTG GT S F + ++F L+ PLLTTK+V ++V+ Sbjct: 25 HQYLDLVKEILETGERRPDRTGTGTYSIFAPRPLKFALNNNGTPILPLLTTKRVFTRAVI 84 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101 ELLWF+ G+++ + L G+ IWD ++ G+LGP+YG QWR + Sbjct: 85 AELLWFVEGNTSSTSLSEAGIKIWDGNGSREFLDNLGLNHREVGDLGPVYGFQWRHFGAE 144 Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQ++ I+ LR +PY RR I+SAWN A + KM LPPCH QFYV Sbjct: 145 YVDAKTDYTGQGVDQLAEIIHKLRTNPYDRRLILSAWNPADLKKMVLPPCHMFAQFYVSY 204 Query: 156 ------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 G L CQLYQRS D+ LG+PFNIASY+LLT M+A V G H + Sbjct: 205 PRRKDGDPETKPQGHLHCQLYQRSCDMGLGVPFNIASYALLTHMMAHVCELVPGSLTHVM 264 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 GD H+Y +H E + QL R PR P++ I + ++ EDF ++ Y+PH I K+ Sbjct: 265 GDAHVYLDHVEALNTQLEREPRDFPELEITREKGGSIDGWKAEDFVIKGYDPHKTIAMKM 324 Query: 263 SV 264 SV Sbjct: 325 SV 326 >gi|213159274|ref|YP_002321317.1| thymidylate synthase/pyrimidine hydroxymethylase-like protein [Oryctes rhinoceros virus] gi|108515120|gb|ABF93345.1| putative thymidylate synthase [Oryctes rhinoceros virus] gi|202073460|gb|ACH96136.1| thymidylate synthase/pyrimidine hydroxymethylase-like protein [Oryctes rhinoceros virus] Length = 321 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 122/255 (47%), Positives = 164/255 (64%), Gaps = 25/255 (9%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 YL L+R V+K S +RTG+ RS+FG+Q+RFDL G PLLTTK + +K+++ EL W Sbjct: 31 NYLSLVRTVLKAPSSP-NRTGIDARSSFGHQLRFDLRNGVLPLLTTKPMPFKTILRELFW 89 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADKDG--------ELGPIYGVQWRSW------- 101 FLRG++N L R V IW E+ D G LGPIYG QWR + Sbjct: 90 FLRGETNQKILERQNVHIWKGNSSREYLDSRGLYDYTEYESLGPIYGFQWRHFGASYVDC 149 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGK 158 DY +DQ+ ++++++ DP SRR I+SAWN +DKMALPPCH L QF+V+ NG+ Sbjct: 150 NTDYTNKGVDQLQQVIRTIKEDPTSRRIIMSAWNPVDLDKMALPPCHILVQFHVNTVNGE 209 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LS QLYQRS D+ LG+PFNIASYS+L ++A + G + G FIH+LGDVH+Y NH A Sbjct: 210 LSAQLYQRSADLMLGVPFNIASYSILVHLIAKICGLKPGYFIHSLGDVHIYENHVSGAKE 269 Query: 219 QLSRSPRTLPQMIIN 233 QL+R P+ P + I+ Sbjct: 270 QLTREPQRQPYLNID 284 >gi|148556688|ref|YP_001264270.1| thymidylate synthase [Sphingomonas wittichii RW1] gi|172048261|sp|A5VCW6|TYSY_SPHWW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148501878|gb|ABQ70132.1| thymidylate synthase [Sphingomonas wittichii RW1] Length = 308 Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 128/302 (42%), Positives = 170/302 (56%), Gaps = 39/302 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLD + G +R DRTGVGT+S FG MRFDLS G PL+TTKK+ WKS + EL+ Sbjct: 7 QQYLDAMARAWYGGDERVDRTGVGTKSLFGVTMRFDLSDGTVPLITTKKIFWKSAIKELI 66 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------DKD----------------GELGP 92 WFL GD+N+ L V IW +W D+D G+LGP Sbjct: 67 WFLSGDTNIRPLVMQNVHIWTDWPLDKYRKATGEAIDRDAFERRIVDDPAFAAEWGDLGP 126 Query: 93 IYGVQWRSWPDY----DG------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 +YG QW WP Y DG ++QI+ +V LRA+P SRR I + WNV + MA Sbjct: 127 VYGKQWVDWPRYTPAGDGLFRREEKGVNQIAELVGMLRANPSSRRLIFTGWNVPELPGMA 186 Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 LPPCH +Q++V G+LS LYQRS D+ LG PFNI ++L MLA + GE + Sbjct: 187 LPPCHMTYQYHVAGGRLSGILYQRSCDLGLGFPFNIFEAAVLIRMLAQQADLEPGELVWM 246 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 D H+Y+NH + QLSRSPR P++ + D+ S+ +DF + Y+PH I A+V Sbjct: 247 GADTHVYSNHGHLVEEQLSRSPRPFPRLSLARKPADMFSYALDDFVIEGYDPHPHIKAEV 306 Query: 263 SV 264 +V Sbjct: 307 AV 308 >gi|115611864|ref|XP_001201855.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115615354|ref|XP_796678.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 432 Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 117/256 (45%), Positives = 160/256 (62%), Gaps = 21/256 (8%) Query: 30 FGYQMRFDLSKGFPLLTTKK-VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD- 87 F + F LS FPLLTTK+ V W+ V ELLWF++G +N + L + IWD KD Sbjct: 177 FLFTFIFSLSDQFPLLTTKRRVFWRGVAEELLWFVKGCTNATELRDKNIHIWDANGSKDF 236 Query: 88 -----------GELGPIYGVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRH 128 G+LGP+YG QWR + DY G +DQ ++++++++ + RR Sbjct: 237 LEKRGLGHHKEGDLGPVYGFQWRHFGAEYKDRFTDYTGQGVDQHTNVIKTIKNNSDDRRI 296 Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 I SAWN + KMALPPCH QFYV NG+LSCQLYQRSGD+ LG+PFNIASYSLLT M+ Sbjct: 297 ITSAWNPPDLPKMALPPCHAFVQFYVCNGELSCQLYQRSGDMGLGVPFNIASYSLLTYMI 356 Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFT 248 A V G + G+F+HTLGD H+Y NH E QL R PR P++ I + ++ F++EDF Sbjct: 357 AHVTGLKPGDFVHTLGDAHVYLNHIEPLKDQLKRVPRQFPKLNIKRKVTNIDDFKFEDFE 416 Query: 249 LRSYEPHAAILAKVSV 264 + Y+P+ I +++V Sbjct: 417 IEGYKPYPKITMQMAV 432 >gi|261192532|ref|XP_002622673.1| thymidylate synthase [Ajellomyces dermatitidis SLH14081] gi|239589548|gb|EEQ72191.1| thymidylate synthase [Ajellomyces dermatitidis SLH14081] gi|239615262|gb|EEQ92249.1| thymidylate synthase [Ajellomyces dermatitidis ER-3] gi|327353622|gb|EGE82479.1| thymidylate synthase [Ajellomyces dermatitidis ATCC 18188] Length = 363 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 134/318 (42%), Positives = 178/318 (55%), Gaps = 57/318 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46 HQYL+L+R +++ G R DRTG GTRS F Q+RF LSK PLLT Sbjct: 48 HQYLNLIRSILEAGEYRPDRTGTGTRSLFAPPQLRFSLSKPNTSNSASTSSRTPILPLLT 107 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+Y Sbjct: 108 TKRVFLRAVLAELLWFISGCTSSLPLSEAGIKIWDGNGSREYLDSVGLSHRPVGDLGPVY 167 Query: 95 GVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 G QWR + DY G +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC Sbjct: 168 GFQWRHFGAEYIDAQTDYAGQGVDQIAEVVRKLKDNPYDRRIILSAWNPADLKKMALPPC 227 Query: 147 HCLFQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 H QFYV G LSCQLYQRS D+ LG+PFNIASY+LLT MLA Sbjct: 228 HMFAQFYVSFPPGDHGHDGRGEKRKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHA 287 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYED 246 G IHT+GD H+Y +H E QL+R P P++II ++D ++ E+ Sbjct: 288 ADLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGVMD--GWKEEE 345 Query: 247 FTLRSYEPHAAILAKVSV 264 F + Y+PH I K+SV Sbjct: 346 FEVVGYKPHKGIKMKMSV 363 >gi|238695380|ref|YP_002922573.1| dTMP (thymidylate) synthase [Enterobacteria phage JS10] gi|220029516|gb|ACL78450.1| dTMP (thymidylate) synthase [Enterobacteria phage JS10] Length = 285 Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 127/290 (43%), Positives = 176/290 (60%), Gaps = 31/290 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L++ +++ G + DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G +IWDE + KD GELGP+YG QWR D+ Sbjct: 61 WFLSGSTNVNDLRFRTHGSLIDGKTIWDENYENQAKDLGYHSGELGPVYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQ+ I+ ++ P RR IVSAWN A I++MALPPCHC +QF V NG L Q YQ Sbjct: 118 G--VDQVVEIINRIKKMPNDRRQIVSAWNPAEINQMALPPCHCFYQFNVRNGHLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ + + G+ H+Y+NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 235 Query: 226 TLPQMIIN-----------PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L ++ I+ + + S + DF L+ YE H I AK++V Sbjct: 236 DLCELEIDLPEEFILWDTKTQLSWIDSMKPSDFVLKGYESHPTIKAKMAV 285 >gi|38640245|ref|NP_944201.1| dTMP synthase [Aeromonas phage Aeh1] gi|33414930|gb|AAQ17973.1| dTMP synthase [Aeromonas phage Aeh1] Length = 277 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 122/282 (43%), Positives = 166/282 (58%), Gaps = 23/282 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLD++ + + G D DRTGVGTRS G R D++ GFP +TTK + WK+V E L Sbjct: 1 MKAYLDIINYTFENGEDEMDRTGVGTRSVLGQVFRHDMADGFPAVTTKTLAWKAVRGECL 60 Query: 61 WFLRGDSNVSYLH--RHGV-----SIWDEWAD--------KDGELGPIYGVQWRSWPDYD 105 WF+ G +NV L +GV +IWD+ + DGELGP+YG QWR D Sbjct: 61 WFMNGFTNVEVLRAMTYGVGSSSKTIWDDNFNHQGVALGYTDGELGPVYGKQWR-----D 115 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 N +DQ++ ++ ++ +P RR+IV AWN +DKMALPPCH LF+F V G+L+ YQ Sbjct: 116 FNGVDQLAKAIERIKTNPECRRNIVCAWNPVDLDKMALPPCHVLFRFSVKRGRLNLTWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D FLG+PFNIASY LL ++A + G++ G L D H+Y+NHFEQ QL R P Sbjct: 176 RSVDTFLGLPFNIASYGLLLEIVAQITGYKAGILTGMLDDTHIYHNHFEQVQEQLQREPH 235 Query: 226 TLPQMIINPNIVDL---LSFRYEDFTLRSYEPHAAILAKVSV 264 LP + L + +D L Y+ H+AI A ++V Sbjct: 236 KLPTLKFKNRFTTLEEACNLSVDDIELEDYKCHSAIKAPMAV 277 >gi|119486915|ref|XP_001262377.1| thymidylate synthase [Neosartorya fischeri NRRL 181] gi|119410534|gb|EAW20480.1| thymidylate synthase [Neosartorya fischeri NRRL 181] Length = 344 Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 133/307 (43%), Positives = 178/307 (57%), Gaps = 46/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 40 HQYLNLIRTILSEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATPSSDPIPVLPLLTTKR 99 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD E+ DK G +LGP+YG Q Sbjct: 100 VFLRAVIAELLWFISGCTSSIPLSEAGIKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 159 Query: 98 WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ +V+ L+ P+ RR I+SAWN A + KMALPPCH Sbjct: 160 WRHFGAEYIDAKTDYTGQGVDQLAEVVRKLKETPFDRRIIMSAWNPADLKKMALPPCHMF 219 Query: 150 FQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 QFYV + G LSC LYQRS D+ LG+PFNIASY+LLT +LA V G IHT Sbjct: 220 AQFYVSYPNGLDNKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHVTDLNPGTLIHT 279 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTLRSYEPHAA 257 +GD H+Y +H + + QL R P P++ I +VD ++ E+F + Y+PH A Sbjct: 280 MGDAHVYLDHVDALNEQLKREPTEFPELRIKRDDRGSGVVD--GWKEEEFEVVGYQPHKA 337 Query: 258 ILAKVSV 264 I +SV Sbjct: 338 IKMNMSV 344 >gi|70982167|ref|XP_746612.1| thymidylate synthase [Aspergillus fumigatus Af293] gi|66844235|gb|EAL84574.1| thymidylate synthase [Aspergillus fumigatus Af293] gi|159122153|gb|EDP47275.1| thymidylate synthase [Aspergillus fumigatus A1163] Length = 344 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 133/307 (43%), Positives = 178/307 (57%), Gaps = 46/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 40 HQYLNLIRTILAEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATPSSDPIPILPLLTTKR 99 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD E+ DK G +LGP+YG Q Sbjct: 100 VFLRAVIAELLWFISGCTSSIPLSEAGIKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 159 Query: 98 WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ +V+ L+ P+ RR I+SAWN A + KMALPPCH Sbjct: 160 WRHFGAEYIDAKTDYTGQGVDQLAEVVRKLKETPFDRRIIMSAWNPADLKKMALPPCHMF 219 Query: 150 FQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 QFYV + G LSC LYQRS D+ LG+PFNIASY+LLT +LA G IHT Sbjct: 220 AQFYVSYPNGLDNKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHATDLNPGTLIHT 279 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN-----IVDLLSFRYEDFTLRSYEPHAA 257 +GD H+Y +H + + QL R P P++ I N +VD ++ E+F + Y+PH A Sbjct: 280 MGDAHVYLDHVDALNEQLKREPTEFPELRIKRNDRGSGVVD--GWKEEEFEVVGYQPHKA 337 Query: 258 ILAKVSV 264 I +SV Sbjct: 338 IKMNMSV 344 >gi|46401828|ref|YP_006920.1| putative thymidylate synthase [Enterobacteria phage T5] gi|45775006|gb|AAS77138.1| putative thymidylate synthase [Enterobacteria phage T5] gi|51512030|gb|AAU05229.1| thymidylate synthase [Enterobacteria phage T5] gi|59897229|gb|AAX12024.1| thymidylate synthase [Enterobacteria phage T5] Length = 279 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 131/284 (46%), Positives = 168/284 (59%), Gaps = 27/284 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL +L VI G R DRTG GT S F +FDL +GFP +TTK++ WKSVV ELL Sbjct: 1 MQQYLKILTDVILLGEPRNDRTGTGTVSIFDSYAKFDLREGFPAVTTKRLAWKSVVGELL 60 Query: 61 WFLRGDSNVSYLH----RHGVSIWDEWADK-----------DGELGPIYGVQWRSWPDYD 105 WFL G +N+ L W W G LGP+YG QWR ++ Sbjct: 61 WFLSGSTNLHDLRVFTFGRDEGQWTIWTPNYEDQAISMGYDKGNLGPVYGKQWR---NFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLY 164 G DQI +++ L+ +P+ RRH+VSAWNVA +DKMALPPCH FQ YV N G L + Sbjct: 118 GR--DQILELIEGLKNNPHGRRHLVSAWNVAELDKMALPPCHYGFQCYVSNDGYLDLKWT 175 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS D FLG+PFNIASY+LLT +LA + G + I + GD H+YN+H EQ + Q+ R P Sbjct: 176 QRSVDCFLGLPFNIASYALLTHILAKLTGLKPRYLIFSGGDTHIYNDHMEQVEEQVKRKP 235 Query: 225 RTLPQMIINPNIVDLLSFRYED-----FTLRSYEPHAAILAKVS 263 R LP +++ P VDL + F L Y+PH A+ AK+S Sbjct: 236 RPLPTLVM-PEFVDLYDLLENNTAAWSFHLEGYDPHPALKAKMS 278 >gi|302415413|ref|XP_003005538.1| bifunctional dihydrofolate reductase-thymidylate synthase [Verticillium albo-atrum VaMs.102] gi|261354954|gb|EEY17382.1| bifunctional dihydrofolate reductase-thymidylate synthase [Verticillium albo-atrum VaMs.102] Length = 326 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 128/307 (41%), Positives = 175/307 (57%), Gaps = 44/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG----FPLLTTKKVHWKSVV 56 HQYLDL+R+++ G R DRTG GT S F ++F L++ PLLTTK+V ++VV Sbjct: 20 HQYLDLVRNILDNGEHRPDRTGTGTYSIFAPTPLKFSLNQNGEPLLPLLTTKRVFLRAVV 79 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--- 101 ELLWF++G ++ L G+ IWD E+ D ++G+LGP+YG QWR + Sbjct: 80 AELLWFVQGSTSSIPLSEAGIKIWDGNGSREFLDSVGLSHREEGDLGPVYGFQWRHFGAE 139 Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQ++ IV L+ +PY RR I+SAWN A + KMALPPCH QFYV Sbjct: 140 YVDAKTDYTGQGVDQLAEIVHKLKTNPYDRRIILSAWNPAHLKKMALPPCHMFAQFYVSY 199 Query: 156 -----------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 G L CQLYQRS D+ LG+PFNIASY+LLT M+A G Sbjct: 200 PRAKRGNAAVVDAEEKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIARACDLVPGS 259 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAA 257 H +GD H+Y +H + + QL R PR P + + D+ ++ EDF ++ Y+PH Sbjct: 260 LTHVMGDAHVYLDHVDALETQLEREPRAFPLLEMTREAGCDIDGWKAEDFVVKGYDPHKT 319 Query: 258 ILAKVSV 264 I K+SV Sbjct: 320 IAMKMSV 326 >gi|225556281|gb|EEH04570.1| thymidylate synthase [Ajellomyces capsulatus G186AR] Length = 369 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 136/325 (41%), Positives = 177/325 (54%), Gaps = 64/325 (19%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46 HQYL L+R +++ G R DRTG GTRS F Q+RF LSK PLLT Sbjct: 47 HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+Y Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166 Query: 95 GVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 G QWR + DY G +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226 Query: 147 HCLFQFYVD----------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 H QFYV G LSCQLYQRS D+ LG+PFNIASY+LL Sbjct: 227 HMFAQFYVSFPAGDRDDGGEEGEEKNEKEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDL 239 T MLA G IHT+GD H+Y +H E QL+R P P++II I+D Sbjct: 287 THMLAHAADLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMD- 345 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++ E+F + Y+PH I K+SV Sbjct: 346 -GWKEEEFEVVGYKPHKGIKMKMSV 369 >gi|315039927|ref|XP_003169341.1| thymidylate synthase [Arthroderma gypseum CBS 118893] gi|311346031|gb|EFR05234.1| thymidylate synthase [Arthroderma gypseum CBS 118893] Length = 345 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 132/310 (42%), Positives = 172/310 (55%), Gaps = 47/310 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 36 HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 95 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Sbjct: 96 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 155 Query: 97 QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ +V+ L+ PY RR I+SAWN A + KMALPPCH Sbjct: 156 QWRHFGAEYVDAKTDYAGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 215 Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 QFYV G LSC LYQRS D+ LG+PFNIASY+LLT M A G Sbjct: 216 FAQFYVSFPPQKEGDERGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPG 275 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYEDFTLRSYEP 254 FIHT+GD H+Y +H E QL+R P P + IN ++ ++ DF + Y+P Sbjct: 276 TFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDQGSGEMDGWKDSDFEVLDYKP 335 Query: 255 HAAILAKVSV 264 H I K+SV Sbjct: 336 HKLIKMKMSV 345 >gi|189210649|ref|XP_001941656.1| bifunctional dihydrofolate reductase-thymidylate synthase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977749|gb|EDU44375.1| bifunctional dihydrofolate reductase-thymidylate synthase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 345 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 133/308 (43%), Positives = 177/308 (57%), Gaps = 45/308 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRS-TFGYQMRFDLSKG------------FPLLTTK 48 HQYL L+R++++ G R DRTG GT + F QM+F LS+ PLLTTK Sbjct: 38 HQYLSLIRNILENGEHRPDRTGTGTYALPFPPQMKFALSQPSSDPTRQDPDLILPLLTTK 97 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD E+ D ++GELGP+YG Sbjct: 98 RVFLRAVIGELLWFVAGSTHSKALSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGF 157 Query: 97 QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ I+ L+ PY RR I+SAWN A I KMALPPCH Sbjct: 158 QWRHFGAEYKGHSHDYTGEGVDQLAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHM 217 Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 QFYV G L LYQRS D+ LG+PFNIASY+LLT MLA V G Sbjct: 218 FAQFYVSFPGHKQGEERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPG 277 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYEDFTLRSYEPHA 256 F HT+GD H+Y +H E +Q+ R PR P + IN I + ++ E+F + Y+PHA Sbjct: 278 TFTHTMGDAHVYLDHVEALKVQVEREPRDFPTLKINREIGGSIDGWKAEEFEVIGYKPHA 337 Query: 257 AILAKVSV 264 +I K+SV Sbjct: 338 SIAMKMSV 345 >gi|302496437|ref|XP_003010220.1| hypothetical protein ARB_03572 [Arthroderma benhamiae CBS 112371] gi|302655144|ref|XP_003019366.1| hypothetical protein TRV_06595 [Trichophyton verrucosum HKI 0517] gi|291173761|gb|EFE29580.1| hypothetical protein ARB_03572 [Arthroderma benhamiae CBS 112371] gi|291183083|gb|EFE38721.1| hypothetical protein TRV_06595 [Trichophyton verrucosum HKI 0517] Length = 351 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 134/312 (42%), Positives = 174/312 (55%), Gaps = 49/312 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 40 HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159 Query: 97 QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ +V+ L+ PY RR I+SAWN A + KMALPPCH Sbjct: 160 QWRHFGAEYIDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219 Query: 149 LFQFYV--------DNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 QFYV D GK LSC LYQRS D+ LG+PFNIASY+LLT M A Sbjct: 220 FAQFYVSFPPQKTGDEGKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN---IVDLLSFRYEDFTLRSY 252 G FIHT+GD H+Y +H E QL+R P P + IN ++ ++ DF + Y Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339 Query: 253 EPHAAILAKVSV 264 +PH I K+SV Sbjct: 340 KPHKLIKMKMSV 351 >gi|259483658|tpe|CBF79227.1| TPA: hypothetical protein similar to thymidylate synthase (Broad) [Aspergillus nidulans FGSC A4] Length = 674 Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 131/312 (41%), Positives = 178/312 (57%), Gaps = 51/312 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F MRF LSK PLLTTK+ Sbjct: 365 HQYLNLIRQILAEGEHRPDRTGTGTRSIFAPNPMRFSLSKPSPTNPSTKIPILPLLTTKR 424 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD E+ DK G +LGP+YG Q Sbjct: 425 VFLRAVLAELLWFISGSTSSIPLSEAGIKIWDGNGSREFLDKVGLSHREVGDLGPVYGFQ 484 Query: 98 WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ IV+ ++ P+ RR I+SAWN A + KMALPPCH Sbjct: 485 WRHFGAEYVDAHTDYTGQGVDQLADIVRKIKETPFDRRIIMSAWNPADLKKMALPPCHMF 544 Query: 150 FQFYVD------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 Q+YV G+LSC LYQRS D+ LG+PFNIASY+LLT ++A G Sbjct: 545 AQYYVSYPEGIEDGKGKGKGELSCLLYQRSCDMGLGVPFNIASYALLTHIIAHATDLNPG 604 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTLRSY 252 + IHT+GD H+Y +H E + QL+R P P++ I ++D ++ E+F + Y Sbjct: 605 KLIHTMGDAHVYLDHVEALEEQLTREPTDFPELKIKREDRGSGVID--GWKEEEFEVIGY 662 Query: 253 EPHAAILAKVSV 264 PH AI K+SV Sbjct: 663 APHKAIKMKMSV 674 >gi|225681301|gb|EEH19585.1| bifunctional dihydrofolate reductase-thymidylate synthase [Paracoccidioides brasiliensis Pb03] Length = 360 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 134/315 (42%), Positives = 178/315 (56%), Gaps = 54/315 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G +R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 48 HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGSSSPSSRTPILPLLTTKR 107 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L + G+ IWD ++ G+LGP+YG Q Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSKAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167 Query: 98 WR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH Sbjct: 168 WRHFGAEYIDAQTDYTGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227 Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 QFYV G LSCQLYQRS D+ LG+PFNIASY+LLT MLA Sbjct: 228 AQFYVSFPSHGGNTESGHEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTL 249 G IHT+GD H+Y +H E QL R P P+++I ++D ++ E+F + Sbjct: 288 YPGTLIHTMGDAHVYLDHIESLQEQLKREPVDFPELVIKRDDRGSGVMD--GWKEEEFEV 345 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I K+SV Sbjct: 346 VGYKPHKGIKMKMSV 360 >gi|67541729|ref|XP_664632.1| hypothetical protein AN7028.2 [Aspergillus nidulans FGSC A4] gi|40742484|gb|EAA61674.1| hypothetical protein AN7028.2 [Aspergillus nidulans FGSC A4] Length = 654 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 131/312 (41%), Positives = 178/312 (57%), Gaps = 51/312 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F MRF LSK PLLTTK+ Sbjct: 345 HQYLNLIRQILAEGEHRPDRTGTGTRSIFAPNPMRFSLSKPSPTNPSTKIPILPLLTTKR 404 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD E+ DK G +LGP+YG Q Sbjct: 405 VFLRAVLAELLWFISGSTSSIPLSEAGIKIWDGNGSREFLDKVGLSHREVGDLGPVYGFQ 464 Query: 98 WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ IV+ ++ P+ RR I+SAWN A + KMALPPCH Sbjct: 465 WRHFGAEYVDAHTDYTGQGVDQLADIVRKIKETPFDRRIIMSAWNPADLKKMALPPCHMF 524 Query: 150 FQFYVD------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 Q+YV G+LSC LYQRS D+ LG+PFNIASY+LLT ++A G Sbjct: 525 AQYYVSYPEGIEDGKGKGKGELSCLLYQRSCDMGLGVPFNIASYALLTHIIAHATDLNPG 584 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTLRSY 252 + IHT+GD H+Y +H E + QL+R P P++ I ++D ++ E+F + Y Sbjct: 585 KLIHTMGDAHVYLDHVEALEEQLTREPTDFPELKIKREDRGSGVID--GWKEEEFEVIGY 642 Query: 253 EPHAAILAKVSV 264 PH AI K+SV Sbjct: 643 APHKAIKMKMSV 654 >gi|330919260|ref|XP_003298539.1| hypothetical protein PTT_09291 [Pyrenophora teres f. teres 0-1] gi|311328202|gb|EFQ93363.1| hypothetical protein PTT_09291 [Pyrenophora teres f. teres 0-1] Length = 345 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 133/308 (43%), Positives = 177/308 (57%), Gaps = 45/308 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRS-TFGYQMRFDLSKG------------FPLLTTK 48 HQYL L+R++++ G R DRTG GT + F QM+F LS+ PLLTTK Sbjct: 38 HQYLALIRNILENGEHRPDRTGTGTYALPFPPQMKFALSRPSLDPARQDPDLILPLLTTK 97 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD E+ D ++GELGP+YG Sbjct: 98 RVFLRAVIGELLWFVAGSTHSKALSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGF 157 Query: 97 QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ I+ L+ PY RR I+SAWN A I KMALPPCH Sbjct: 158 QWRHFGAEYKGHSHDYTGEGVDQLAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHM 217 Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 QFYV G L LYQRS D+ LG+PFNIASY+LLT MLA V G Sbjct: 218 FAQFYVSFPGHKQGEERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPG 277 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYEDFTLRSYEPHA 256 F HT+GD H+Y +H E +Q+ R PR P + IN I + ++ E+F + Y+PHA Sbjct: 278 TFTHTMGDAHVYLDHVEALKVQVEREPRDFPTLKINREIGGSIDGWKAEEFEVIGYKPHA 337 Query: 257 AILAKVSV 264 +I K+SV Sbjct: 338 SIAMKMSV 345 >gi|310799823|gb|EFQ34716.1| thymidylate synthase [Glomerella graminicola M1.001] Length = 325 Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 125/304 (41%), Positives = 172/304 (56%), Gaps = 41/304 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R +++ G R DRTG GT S F ++F L+K PLLTTK+V ++V+ Sbjct: 22 YQYLDLVREILEEGEHRPDRTGTGTYSIFAPAPLKFSLNKNGKPLLPLLTTKRVFLRAVI 81 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101 ELLWF+ G+++ L GV IWD ++ G+LGP+YG QWR + Sbjct: 82 AELLWFVEGNTSSLPLSEAGVKIWDGNGSREFLDSVGLSHREVGDLGPVYGFQWRHFGAE 141 Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQ++ ++ L+ +PY RR ++SAWN A + KMALPPCH QFYV Sbjct: 142 YVDAKTDYTGQGVDQLAEVIHKLKTNPYDRRILLSAWNPADLKKMALPPCHMFAQFYVSY 201 Query: 156 -------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 G L CQLYQRS D+ LG+PFNIASY+LLT M+A G H Sbjct: 202 PRARSAPADGEKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIARACDLVPGSLTHV 261 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILA 260 +GD H+Y +H + +QL R PR P + IN + +R EDF ++ Y+PH I Sbjct: 262 MGDAHVYADHVDALKVQLEREPRDFPLLEINNREAGCSIDGWRVEDFVVKGYDPHKTIAM 321 Query: 261 KVSV 264 K+SV Sbjct: 322 KMSV 325 >gi|327298179|ref|XP_003233783.1| thymidylate synthase [Trichophyton rubrum CBS 118892] gi|326463961|gb|EGD89414.1| thymidylate synthase [Trichophyton rubrum CBS 118892] Length = 351 Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 134/312 (42%), Positives = 174/312 (55%), Gaps = 49/312 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 40 HQYLNLIRTIIGTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEGGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159 Query: 97 QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ +V+ L+ PY RR I+SAWN A + KMALPPCH Sbjct: 160 QWRHFGAEYIDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219 Query: 149 LFQFYV--------DNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 QFYV D GK LSC LYQRS D+ LG+PFNIASY+LLT M A Sbjct: 220 FAQFYVSFPLQKAGDEGKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN---IVDLLSFRYEDFTLRSY 252 G FIHT+GD H+Y +H E QL+R P P + IN ++ ++ DF + Y Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339 Query: 253 EPHAAILAKVSV 264 +PH I K+SV Sbjct: 340 KPHKLIKMKMSV 351 >gi|260889012|ref|ZP_05900275.1| thymidylate synthase [Leptotrichia hofstadii F0254] gi|260861072|gb|EEX75572.1| thymidylate synthase [Leptotrichia hofstadii F0254] Length = 289 Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 127/292 (43%), Positives = 169/292 (57%), Gaps = 31/292 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++++V+ G + +RTGV T STF Y + DLS+G+PLLTTKK+++ S++HEL Sbjct: 1 MKQYLDMVKYVLDNGIKKENRTGVDTISTFAYSYKVDLSEGYPLLTTKKMYFNSMLHELF 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVI------- 109 W+L G+ ++ L R IWD WAD++G L YG WR +P DG V Sbjct: 61 WYLSGEEHIKNL-RKKTKIWDAWADEEGRLETAYGRFWRRYPVPEISLDGEVFADENNPW 119 Query: 110 -----------DQISSIVQSLR---ADPY---SRRHIVSAWNVALIDKMALPPCHCLFQF 152 DQI I+ +L+ +P RR IV AWN LPPCH F F Sbjct: 120 VTREKNGQLVFDQIQYIIDTLKEMKTNPNHKNGRRMIVLAWNPGNATISKLPPCHYTFAF 179 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 V KL+C L QRSGD+ LGIPFN+A YSLLTMM+A G++ GEF HT+ D H+Y NH Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEAGEFAHTIIDAHIYENH 239 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL+R P LP++ I + L+F ED +L YE H I +V+V Sbjct: 240 IEGLKEQLTREPLKLPKIKIADKPFNELTF--EDISLEDYESHPVIKFEVAV 289 >gi|46108362|ref|XP_381239.1| hypothetical protein FG01063.1 [Gibberella zeae PH-1] Length = 325 Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 123/302 (40%), Positives = 173/302 (57%), Gaps = 39/302 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R +++ G R DRTG GT S F + ++F L+ PLLTTK+V ++V+ Sbjct: 24 NQYLDLVREILETGERRPDRTGTGTFSIFAPRPLKFALNNNGTPILPLLTTKRVFTRAVI 83 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101 ELLWF+ G+++ L G+ IWD ++ G+LGP+YG QWR + Sbjct: 84 AELLWFIEGNTSSKSLSEAGIKIWDGNGSREFLDNLGLQHREVGDLGPVYGFQWRHFGAE 143 Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQ++ I+ LR +PY RR ++SAWN A + KM LPPCH QFYV Sbjct: 144 YVDAKTDYTGQGVDQLAEIIHKLRTNPYDRRLVLSAWNPADMKKMVLPPCHMFAQFYVSY 203 Query: 156 ------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 G L CQLYQRS D+ LG+PFNIASY+LLT M+A V G H + Sbjct: 204 PRSKDENSEEKPQGHLHCQLYQRSCDMGLGVPFNIASYALLTHMMAHVCELVPGSLTHVM 263 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 GD H+Y +H + +QL R PR P++ I + ++ +DFT++ Y+PH I K+ Sbjct: 264 GDAHVYLDHVDALKVQLEREPRNFPELEIAREKGGSIDGWKADDFTVKGYDPHKTIAMKM 323 Query: 263 SV 264 SV Sbjct: 324 SV 325 >gi|226288197|gb|EEH43710.1| thymidylate synthase [Paracoccidioides brasiliensis Pb18] Length = 360 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 134/315 (42%), Positives = 178/315 (56%), Gaps = 54/315 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G +R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 48 HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGSSSPSSRTPILPLLTTKR 107 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L + G+ IWD ++ G+LGP+YG Q Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSKAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167 Query: 98 WR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH Sbjct: 168 WRHFGAEYIDAQTDYMGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227 Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 QFYV G LSCQLYQRS D+ LG+PFNIASY+LLT MLA Sbjct: 228 AQFYVSFPSHGGNTESGHEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTL 249 G IHT+GD H+Y +H E QL R P P+++I ++D ++ E+F + Sbjct: 288 YPGTLIHTMGDAHVYLDHIEALQEQLKREPVDFPELVIKRDDRGSGVMD--GWKEEEFEV 345 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I K+SV Sbjct: 346 VGYKPHKGIKMKMSV 360 >gi|32453722|ref|NP_861931.1| dTMP (thymidylate) synthase [Enterobacteria phage RB69] gi|32350541|gb|AAP76140.1| dTMP (thymidylate) synthase [Enterobacteria phage RB69] Length = 286 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 128/291 (43%), Positives = 175/291 (60%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L+ +++ G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQYLINDILENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWD---EWADKD-----GELGPIYGVQWRSWPDYD 105 WF+ G +NV+ L G +IWD E KD GELGPIYG QWR D+ Sbjct: 61 WFMSGSTNVNDLRIRTHGSLIEGKTIWDDNYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQ+ + ++A P RR IVSAWN A ID+MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQLVKTIDRIKALPNDRRQIVSAWNPAEIDQMALPPCHMFYQFNVRNGHLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ LT ++A + G+ + + G+ H+Y+NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCKEVLRREPK 235 Query: 226 TLPQMIIN--------PNIVDL----LSFRYEDFTLRSYEPHAAILAKVSV 264 L + IN P + + + + DF L++YE H I AK++V Sbjct: 236 ELCSLEINWPSNFENWPTKIQMDWVTGTMTHSDFVLKNYESHPTIKAKMAV 286 >gi|170116608|ref|XP_001889494.1| predicted protein [Laccaria bicolor S238N-H82] gi|164635496|gb|EDQ99802.1| predicted protein [Laccaria bicolor S238N-H82] Length = 308 Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 127/295 (43%), Positives = 168/295 (56%), Gaps = 32/295 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYL L+R V+ G R DRTG GT + F +RF L+ PLLTTK+ + +V EL Sbjct: 14 QQYLQLIRRVLDAGDIRPDRTGTGTIAIFAPPSLRFSLADSTLPLLTTKRTFMRGIVEEL 73 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------ 101 LWF+ G ++ + L + GV IWD K +G+LGP+YG QWR + Sbjct: 74 LWFVHGSTDSTILSKKGVKIWDGNGSKAFLEGRGLGHRREGDLGPVYGFQWRHFGAEYVD 133 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154 DY G +DQ+ ++ ++ +P RR I+SAWN I +MALPPCH L QFYV Sbjct: 134 CDKDYTGQGVDQLRECIKKIKENPTDRRIILSAWNPKDIPQMALPPCHMLCQFYVHLPPA 193 Query: 155 ----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 KLSC +YQRS D+ LGIPFNIASY+LLT M+A V G E I LGD H+Y Sbjct: 194 SDPTQKPKLSCLMYQRSADLGLGIPFNIASYALLTHMIAHVTGTTAHELIIQLGDAHVYR 253 Query: 211 NHFEQADLQLSRSPRTLPQMI-INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + + QL R PR P++ NI D+ F Y DF + YEPH +I K+S+ Sbjct: 254 DHVDALEEQLKREPRPFPKLRWARDNIDDIEDFVYSDFVVEGYEPHPSIAMKMSI 308 >gi|148927741|ref|ZP_01811178.1| Thymidylate synthase [candidate division TM7 genomosp. GTL1] gi|147886915|gb|EDK72448.1| Thymidylate synthase [candidate division TM7 genomosp. GTL1] Length = 280 Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 117/268 (43%), Positives = 166/268 (61%), Gaps = 11/268 (4%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL L+ ++K G + R G ++ FGYQ+RFD+ +GFPLLTTKK+ +K ++HEL W Sbjct: 6 YQYLQLMADILKDGRSKPSRGIHGLKAIFGYQIRFDMRQGFPLLTTKKMPFKILLHELFW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F+ G S+V YLH H + WD + + +LG +YGVQWR W DG+ DQ+ ++ ++ Sbjct: 66 FISGSSSVDYLHEHKIHYWDGFLHEGSDDLGRVYGVQWRHWLRPDGSQFDQLQWAIEQIK 125 Query: 121 ADPYSRRHIVSAWNVA-LIDK---------MALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 +P S+ IVSAWN L DK M LPPCH +FQF V GKL QLYQRS DV Sbjct: 126 TNPNSKAIIVSAWNAGELGDKRWNPNDYGDMRLPPCHTMFQFDVTGGKLRMQLYQRSSDV 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 FLG+PFNIA Y++L M+A + + E I ++G HLY N E A Q+ R P P++ Sbjct: 186 FLGLPFNIAQYAMLLHMVAYLADLEPRELIISIGSAHLYRNQIEPAKEQVRRKPYRFPKL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAI 258 I ++ D+ F+ ++F+L Y+ H I Sbjct: 246 TIAGDVKDIDDFKEKNFSLEGYQSHPHI 273 >gi|66391514|ref|YP_239039.1| Td thymidylate synthetase [Enterobacteria phage RB43] gi|62288602|gb|AAX78585.1| Td thymidylate synthetase [Enterobacteria phage RB43] Length = 285 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 132/286 (46%), Positives = 174/286 (60%), Gaps = 23/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++R V+ G + DRTGVGT FG Q R++L++GFP T+K++ +K HEL Sbjct: 1 MKQYLDIIRLVLANGVESTDRTGVGTIRIFGAQTRWNLAEGFPATTSKQLFFKPCKHELQ 60 Query: 61 WFLRGDSNVSYLHRH--GV-----SIWDEWADKD--------GELGPIYGVQWRSWPD-- 103 WFL G +NV L G+ +IWD+ + G LGPIYG QWRS+ Sbjct: 61 WFLSGSTNVDELREMTWGIGSDKRTIWDDNYENQAKSLGYSHGYLGPIYGHQWRSFGGDL 120 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y + +DQI+ IV L+ P R IVSAWN +DKMAL PCHC FQF V NGKLS Q Sbjct: 121 YGNHSVDQIARIVNELKTTPDDRGIIVSAWNPVDLDKMALRPCHCFFQFVVINGKLSLQW 180 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLS 221 YQRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N EQA L+ Sbjct: 181 YQRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAIEQAKELLKPE 240 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFT---LRSYEPHAAILAKVSV 264 R P LP + + P + LL E F L+ Y H ++ A ++V Sbjct: 241 REPLPLPTLYM-PKVNSLLDLDQEFFDSIHLKDYNHHGSLKAAMAV 285 >gi|206590566|emb|CAQ37528.1| probable thymidylate synthase (partial sequence c terminus) protein [Ralstonia solanacearum MolK2] Length = 415 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 106/182 (58%), Positives = 132/182 (72%) Query: 83 WADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 WAD DGELGPIYG QWRSWP G IDQI+ ++ ++ +P SRR IVSAWNV I +M Sbjct: 234 WADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIKRNPDSRRLIVSAWNVGDIPRMK 293 Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A G G+F+ T Sbjct: 294 LPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAQQTGLDVGDFVWT 353 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 GD HLYNNHFEQ + QL+R+P LP++ I + +++EDF + Y+ HAAI A V Sbjct: 354 GGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIFDYQFEDFEIVGYQSHAAIKAPV 413 Query: 263 SV 264 +V Sbjct: 414 AV 415 >gi|169854361|ref|XP_001833855.1| thymidylate synthase [Coprinopsis cinerea okayama7#130] gi|116504990|gb|EAU87885.1| thymidylate synthase [Coprinopsis cinerea okayama7#130] Length = 319 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 125/295 (42%), Positives = 166/295 (56%), Gaps = 32/295 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59 +QYL L+R V+ G R DRTG GT + F RF L PLLTTK+ + ++ EL Sbjct: 25 YQYLSLIRRVLDTGDIRPDRTGTGTIALFAPPSFRFSLLDATLPLLTTKRTFLRGIIEEL 84 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW------ 101 LWF+ G ++ L G+ IWD K+ G+LGP+YG QWR + Sbjct: 85 LWFVHGCTDSKLLSEKGIKIWDGNGSKEFLESRGLGHRREGDLGPVYGFQWRHFGAEYVD 144 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ+ ++ ++ +P RR I+SAWN I +MALPPCH + QFYV Sbjct: 145 CDADYTGQGVDQLRECIKKIKENPTDRRIILSAWNPKDIPQMALPPCHMMCQFYVQLPPQ 204 Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 +LSC +YQRS D+ LGIPFNIASY+LLT M+A V G + E I LGD H+Y Sbjct: 205 SDPTRKPRLSCLMYQRSADLGLGIPFNIASYALLTHMIAHVTGTEAHELIIQLGDAHVYR 264 Query: 211 NHFEQADLQLSRSPRTLPQMI-INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H E + QL R PR P++ IVD+ F+YEDF + Y PH I K+SV Sbjct: 265 DHVEALEEQLKREPRPFPKIRWAREGIVDIEDFKYEDFVVEGYNPHGPIAMKMSV 319 >gi|121714363|ref|XP_001274792.1| thymidylate synthase [Aspergillus clavatus NRRL 1] gi|119402946|gb|EAW13366.1| thymidylate synthase [Aspergillus clavatus NRRL 1] Length = 332 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 133/307 (43%), Positives = 176/307 (57%), Gaps = 46/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 28 HQYLNLIRTILAEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATSTADRIPVLPLLTTKR 87 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L GV IWD E+ DK G +LGP+YG Q Sbjct: 88 VFLRAVLAELLWFISGCTSSLPLSEAGVKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 147 Query: 98 WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ +V+ L+ P+ RR I+SAWN A + KMALPPCH Sbjct: 148 WRHFGAEYVDAKTDYAGQGVDQLAEVVRKLKDTPFDRRIIMSAWNPADLKKMALPPCHMF 207 Query: 150 FQFYVD-------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 QFYV G LSC LYQRS D+ LG+PFNIASY+LLT +LA G IHT Sbjct: 208 AQFYVSYPDGLDRKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHATDLNPGTLIHT 267 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTLRSYEPHAA 257 +GD H+Y +H + + QL R P P++ I +VD ++ E+F + Y+PH A Sbjct: 268 MGDAHVYLDHVDALEEQLKREPTEFPELRIKRDDRGSGVVD--GWKEEEFEVIGYQPHKA 325 Query: 258 ILAKVSV 264 I +SV Sbjct: 326 IKMNMSV 332 >gi|32709473|gb|AAP86755.1| thymidylate synthase [Enterobacteria phage RB3] Length = 286 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 125/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DLSKGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLSKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L+ Y+ H + K++V Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286 >gi|32709471|gb|AAP86754.1| thymidylate synthase [Enterobacteria phage RB27] Length = 286 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 125/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI +V ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHVFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L+ Y+ H + K++V Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286 >gi|291290454|dbj|BAI83249.1| dTMP (thymidylate) synthase [Enterobacteria phage AR1] Length = 286 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 125/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI +V ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L+ Y+ H + K++V Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286 >gi|302689813|ref|XP_003034586.1| thymidylate synthase [Schizophyllum commune H4-8] gi|300108281|gb|EFI99683.1| thymidylate synthase [Schizophyllum commune H4-8] Length = 317 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 126/296 (42%), Positives = 168/296 (56%), Gaps = 33/296 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 HQYL+L++ V+ G R DRTG GT + F +RF L+ PL+TTK+ + +V EL Sbjct: 22 HQYLELIQRVMDMGEVRADRTGTGTIALFAPPNLRFSLADSTLPLITTKRTFLRGIVEEL 81 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW------ 101 LWF+ G ++ + L R V+IWD K+ G+LGP+YG QWR + Sbjct: 82 LWFIHGCTDSTVLSRKKVTIWDGNGSKEFLEGRGLGHRREGDLGPVYGFQWRHFGAEYKD 141 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154 DY G +DQ+ + ++ +P RR I+SAWN I MALPPCH L QFYV Sbjct: 142 ADADYTGQGVDQLRECIHKIKHNPTDRRIIMSAWNPKDIPLMALPPCHLLCQFYVHLPPA 201 Query: 155 -----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 KLSC +YQRS D+ LG+PFNIASY+LLT M+A V G E I LGD H+Y Sbjct: 202 GAPDTQKPKLSCLMYQRSADLGLGVPFNIASYALLTHMIAHVTGTDAHELIIQLGDAHVY 261 Query: 210 NNHFEQADLQLSRSPRTLPQMI-INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H E QL R PR P++ +I D+ F+YEDF + Y PH +I K+SV Sbjct: 262 RDHVEALQTQLQREPRAFPKLRWGRDDIEDIEDFKYEDFVVEGYNPHPSIPMKMSV 317 >gi|9631429|ref|NP_048309.1| ORF MSV238 putative thymidylate synthase, similar to Arabidopsis thaliana GB:L08594 [Melanoplus sanguinipes entomopoxvirus] gi|4049782|gb|AAC97742.1| ORF MSV238 putative thymidylate synthase, similar to Arabidopsis thaliana GB:L08594 [Melanoplus sanguinipes entomopoxvirus] Length = 292 Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 107/273 (39%), Positives = 161/273 (58%), Gaps = 21/273 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL + ++ G ++RTGV T++ +G M++ L FPL TTK + W+ +V ELLW Sbjct: 9 YQYLKGISEILSNGRITKNRTGVDTKTVYGLTMKYKLDDSFPLFTTKSMFWRGIVEELLW 68 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW-------- 101 F+ G +N + L G+ IWDE K+G+LGP+YG QWR + Sbjct: 69 FISGSTNTNILKNKGIHIWDENGSLKYIKKRGFNDRKEGDLGPVYGFQWRHFGAKYIDMD 128 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LS 160 +Y DQ++ I+ ++ P SR I++AWN ++ M +PPCHC QF+V N K L+ Sbjct: 129 TNYTNQGFDQLTHIINKIKNKPESRNIILTAWNPIDVENMVIPPCHCFVQFHVINNKYLT 188 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFN+ASYSLLT M+A + + EFIH +G+ H+Y NH QL Sbjct: 189 CQMYQRSADMGLGVPFNVASYSLLTYMIAHLTNLKPYEFIHNIGNAHIYVNHINGLKKQL 248 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R+P P++ I + ++ F+++DF L Y Sbjct: 249 ERTPNPFPKLKIKRQVDNIDDFKFDDFELIDYN 281 >gi|296818039|ref|XP_002849356.1| thymidylate synthase [Arthroderma otae CBS 113480] gi|238839809|gb|EEQ29471.1| thymidylate synthase [Arthroderma otae CBS 113480] Length = 349 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 130/310 (41%), Positives = 171/310 (55%), Gaps = 47/310 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 40 HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFALSKPSSDPSNPDPIPVLPLLTTK 99 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159 Query: 97 QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ +V+ L+ PY RR I+SAWN A + KMALPPCH Sbjct: 160 QWRHFGAEYVDAKTDYAGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219 Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 QFYV G LSC LYQRS D+ LG+PFNIASY+LLT M A G Sbjct: 220 FAQFYVSFPPQQEGDKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPG 279 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFTLRSYEP 254 IHT+GD H+Y +H E QL+R P P + I + ++ ++ DF + Y+P Sbjct: 280 TLIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKIHRTDRGSGEMDGWKDSDFEVLDYKP 339 Query: 255 HAAILAKVSV 264 H I K+SV Sbjct: 340 HKLIKMKMSV 349 >gi|32709465|gb|AAP86751.1| thymidylate synthase [Enterobacteria phage LZ2] Length = 286 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 124/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L+ Y+ H + K++V Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286 >gi|32364179|gb|AAP80238.1| dTMP thymidylate synthase [Enterobacteria phage T2] gi|32709475|gb|AAP86756.1| thymidylate synthase [Enterobacteria phage T2H] gi|113951991|gb|ABI48931.1| Td [Enterobacteria phage T2H] Length = 286 Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 126/291 (43%), Positives = 172/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DLSKGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLSKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMIIN------------PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I+ + +L R +DF L +Y H I K++V Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286 >gi|320586368|gb|EFW99047.1| thymidylate synthase [Grosmannia clavigera kw1407] Length = 316 Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 128/307 (41%), Positives = 171/307 (55%), Gaps = 44/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R ++ G R DRTG GT S F + +F LS PLLTTK+V + V+ Sbjct: 10 YQYLDLVREILDSGERRPDRTGTGTLSIFAPRPFKFQLSDNGRLVLPLLTTKRVFHRGVI 69 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--- 101 ELLWF++G+++ L G+ IWD E+ D +G+LGP+YG QWR + Sbjct: 70 AELLWFIQGNTSSLALSNAGIKIWDGNGSREFLDSVGLSHRAEGDLGPVYGFQWRHFGAE 129 Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY +DQ++ ++ LR DPY+RR I+SAWN + MALPPCH QFYV Sbjct: 130 YVDASTDYTSQGVDQLADVIHKLRTDPYNRRIILSAWNPKDLPSMALPPCHMFAQFYVSF 189 Query: 156 -----------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 G L CQLYQRS D+ LG+PFNIASY+LLT MLA V G Sbjct: 190 PRQDQGQEDSSKDTQKVKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGS 249 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYEDFTLRSYEPHAA 257 F H +GD H+Y +H E QL R PR PQ+ I ++ + ++ EDF ++ Y PH Sbjct: 250 FTHVMGDAHIYIDHAEALQTQLEREPREFPQLEIMRDVGGSIDGWKEEDFVIKGYTPHKP 309 Query: 258 ILAKVSV 264 I K+S Sbjct: 310 IAMKMST 316 >gi|304373617|ref|YP_003858362.1| Td thymidylate synthetase [Enterobacteria phage RB16] gi|299829573|gb|ADJ55366.1| Td thymidylate synthetase [Enterobacteria phage RB16] Length = 284 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 128/285 (44%), Positives = 174/285 (61%), Gaps = 22/285 (7%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++ V+ G++ DRTGVGT FG Q R++L++GFP T+K++ +K HEL Sbjct: 1 MKQYLDIVNTVLTHGTESTDRTGVGTLRIFGMQARWNLAEGFPATTSKQLFFKPCKHELQ 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWADKD--------GELGPIYGVQWRSW-PDY 104 WFL G +NV L + +IWD+ + G LGPIYG QWRS+ + Sbjct: 61 WFLEGSTNVETLRKMTWGEDSDKRTIWDDNYENQAKALGYTHGYLGPIYGHQWRSFGAEG 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + +DQI+ IV+ L+ P R IVSAWN +D MAL PCHC FQF V NGKLS Q Y Sbjct: 121 SFSGVDQIARIVKELKEKPDDRGIIVSAWNPVDLDDMALRPCHCFFQFVVINGKLSLQWY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLSR 222 QRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N EQA L+ R Sbjct: 181 QRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAVEQAKELLKPER 240 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFT---LRSYEPHAAILAKVSV 264 +P LP + + P + LL E F L+ Y H ++ A ++V Sbjct: 241 APLPLPTLYM-PKVNSLLDLDQEFFDSIHLKDYNHHGSLKAAMAV 284 >gi|257125466|ref|YP_003163580.1| thymidylate synthase [Leptotrichia buccalis C-1013-b] gi|257049405|gb|ACV38589.1| thymidylate synthase [Leptotrichia buccalis C-1013-b] Length = 289 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 126/292 (43%), Positives = 167/292 (57%), Gaps = 31/292 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++++V+ G + +RTGV T STF Y + DLS+G+PLLTTKK+++ S++HEL Sbjct: 1 MKQYLDMVKYVLDNGVKKENRTGVDTISTFAYSYKVDLSEGYPLLTTKKMYFNSMLHELF 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVI------- 109 W+L G+ ++ L R IWD WAD++G L YG WR +P DG V Sbjct: 61 WYLSGEEHIKNL-RKKTKIWDAWADEEGRLQTAYGRFWRRYPVPEISLDGEVFADEDNPW 119 Query: 110 -----------DQISSIVQSLR---ADPY---SRRHIVSAWNVALIDKMALPPCHCLFQF 152 DQI I+ +L+ +P RR IV AWN LPPCH F F Sbjct: 120 VTREENGQLVFDQIQYIIDTLKEMKTNPNHKNGRRMIVLAWNPGNATISKLPPCHYTFAF 179 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 V KL+C L QRSGD+ LGIPFN+A YSLLTMM+A G++ GEF HT+ D H+Y NH Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEVGEFAHTIIDAHIYENH 239 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL+R P L ++ I + L+F ED L YE H I +V+V Sbjct: 240 IEGLKEQLTREPLKLAKIKIVDKPFNELTF--EDIMLEDYESHPVIKFEVAV 289 >gi|109290183|ref|YP_656432.1| thymidylate synthetase [Aeromonas phage 25] gi|104345856|gb|ABF72756.1| thymidylate synthetase [Aeromonas phage 25] Length = 279 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 126/282 (44%), Positives = 168/282 (59%), Gaps = 21/282 (7%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+ +I G + DRTGVGTRS FG +RFDLSKGFP T K++ + VV ELL Sbjct: 1 MIQYTDLVCDIITNGRKKTDRTGVGTRSVFGRMLRFDLSKGFPATTRKRLAFVPVVGELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WF++G +NV +L + +IWD+ +K DG LGP+YG QWR + + Sbjct: 61 WFMQGSTNVEHLRKLTYGENSDRKTIWDDNYNKQAVDLGYSDGYLGPVYGKQWRMFGNK- 119 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 N +DQ+ +++ ++A+P SRR +V AWN I+KMALPPCH FQF V GKLS Q Sbjct: 120 -NPVDQLQNVIDQIKANPDSRRLLVVAWNPEDIEKMALPPCHYAFQFEVYEGKLSLMWSQ 178 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DV LG+PFNIASY+LL ++A + + GE + + DVH+Y NH LSR R Sbjct: 179 RSVDVGLGLPFNIASYALLVHIVARICNLEVGELVFSGADVHIYENHLSHLGGMLSREER 238 Query: 226 TLPQMIINPNIVDLLSFRY---EDFTLRSYEPHAAILAKVSV 264 LP + P+I L R DF L Y+PH I ++V Sbjct: 239 PLPTLSF-PDIGSLSDLRLLEAADFRLDGYDPHPTIKLPMAV 279 >gi|307293290|ref|ZP_07573136.1| thymidylate synthase [Sphingobium chlorophenolicum L-1] gi|306881356|gb|EFN12572.1| thymidylate synthase [Sphingobium chlorophenolicum L-1] Length = 296 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 121/296 (40%), Positives = 169/296 (57%), Gaps = 39/296 (13%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHELLWFLRGD 66 +RH+ + G +R DRTGVGTRS G MRF L+ PLLTTK+V+WK E+LWFL GD Sbjct: 1 MRHIWRHGDERIDRTGVGTRSILGATMRFSLADDAVPLLTTKRVYWKVAAREMLWFLTGD 60 Query: 67 SNVSYLHRHGVSIWDEWA------------DKD----------------GELGPIYGVQW 98 +N+ L R GV IW +W D+D G+LGP+YG QW Sbjct: 61 TNIRELVRQGVHIWTDWPLDAYRRATGEDIDRDAFEARIVEDEAFAARWGDLGPVYGAQW 120 Query: 99 RSWPDYD--GNVI--------DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 +WP Y+ G+ + +QI+ +V+ +R +P SRR + + WNVA + +M+LPPCH Sbjct: 121 VNWPRYEAVGDGLYRKAAQGHNQIADLVEGIRNNPGSRRLLFTGWNVAEVSRMSLPPCHM 180 Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 +QF V +G+L+ L+QRS D+ LG FNI S++T MLA + GE + GDVHL Sbjct: 181 TYQFQVADGRLNGLLFQRSCDLGLGFAFNIFGLSMITRMLAQQCDLKPGEVVWQGGDVHL 240 Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Y NH E + Q+ R+P P++ IN + +R EDF + Y P I A V+V Sbjct: 241 YLNHAELVEEQIGRNPSGAPKLRINRRPSSIFDYRIEDFEVVDYAPQRHIAAPVAV 296 >gi|258577885|ref|XP_002543124.1| thymidylate synthase [Uncinocarpus reesii 1704] gi|237903390|gb|EEP77791.1| thymidylate synthase [Uncinocarpus reesii 1704] Length = 347 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 129/311 (41%), Positives = 170/311 (54%), Gaps = 48/311 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 37 HQYLNLIRSILTTGEHRPDRTGTGTRSLFAPPQLRFSLSKPGPASSSAPIPILPLLTTKR 96 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+YG Q Sbjct: 97 VFLRAVILELLWFVSGSTSSIPLSEAGVKIWDGNGSREFLDSVGLSHRDVGDLGPVYGFQ 156 Query: 98 WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQI +V+ L+ +PY RR I+SAWN A + KMALPPCH Sbjct: 157 WRHFGAEYVDAKADYTGKGVDQIVEVVRKLKENPYDRRIILSAWNPADLKKMALPPCHMF 216 Query: 150 FQFYVD-------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196 QFYV G L C LYQRS D+ LG+PFNIASY++LT MLA Sbjct: 217 AQFYVSFAPDANGETGKRQKGTLHCLLYQRSCDMGLGVPFNIASYAILTHMLAHAADLYP 276 Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFTLRSYE 253 G HT+GD H+Y +H E QL+R P P++ I + ++ + DF + Y+ Sbjct: 277 GTLTHTMGDAHVYLDHVEALQEQLTREPTAFPELKIKREDRGSGEMDGWEESDFEVIGYK 336 Query: 254 PHAAILAKVSV 264 PH I K+SV Sbjct: 337 PHKMIKMKMSV 347 >gi|262037574|ref|ZP_06011030.1| thymidylate synthase [Leptotrichia goodfellowii F0264] gi|261748396|gb|EEY35779.1| thymidylate synthase [Leptotrichia goodfellowii F0264] Length = 289 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 126/292 (43%), Positives = 166/292 (56%), Gaps = 31/292 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+L++HV+ G + +RT V T STF Y + DLSKGFPLLTTKK+++ S++HEL Sbjct: 1 MKEYLELVKHVLDNGVRKENRTEVDTISTFAYTYKVDLSKGFPLLTTKKMYFNSMLHELF 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVI------- 109 W+L G+ ++ L R IWD WAD++G L YG WR +P DG V Sbjct: 61 WYLTGEEHIKNL-RTKTKIWDAWADEEGRLETAYGRFWRRYPVPEISLDGEVFTDENNKW 119 Query: 110 -----------DQISSIVQSLR---ADPY---SRRHIVSAWNVALIDKMALPPCHCLFQF 152 DQI I+ +L+ +P RR IV AWN LPPCH F F Sbjct: 120 TKREKNGQLVFDQIQYIIDTLKEMKTNPNHKNGRRLIVLAWNPGNASISKLPPCHYTFAF 179 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 V +L+C L QRSGD+ LGIPFN+A YSLLTMM+A G++ GEF HT+ D H+Y NH Sbjct: 180 NVLGNRLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEPGEFSHTIIDAHIYENH 239 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL+R P L ++ I + L+F ED L YE H I +V+V Sbjct: 240 IEGLKEQLTREPLKLSKITIADKPFNELTF--EDIKLEDYESHPVIKFEVAV 289 >gi|330858750|ref|YP_004415125.1| putative thymidylate synthase [Shigella phage Shfl2] gi|327397684|gb|AEA73186.1| putative thymidylate synthase [Shigella phage Shfl2] Length = 286 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 125/293 (42%), Positives = 176/293 (60%), Gaps = 36/293 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACISELL 60 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L + G +IWDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRQRTHGSLIAGKTIWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI +V ++ P RR IVSAWN + +MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIVEVVNRIKTFPNDRRQIVSAWNPVELKQMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ + + G+ H+Y+NH EQ L+R+P Sbjct: 176 RSVDVFLGLPFNIASYAALLHIVADMCELVPGDLVFSGGNTHIYSNHIEQCKEILNRTPM 235 Query: 226 TLPQMIIN-PN-------------IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L ++ IN PN + + ++ R DF L+ Y+ H + K++V Sbjct: 236 DLCKLSINWPNGFSQCDTETQMYWLTEYMTAR--DFVLKDYQSHGVLKGKMAV 286 >gi|39944952|ref|XP_362013.1| hypothetical protein MGG_04458 [Magnaporthe oryzae 70-15] gi|145021519|gb|EDK05648.1| hypothetical protein MGG_04458 [Magnaporthe oryzae 70-15] Length = 339 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 126/321 (39%), Positives = 173/321 (53%), Gaps = 58/321 (18%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R ++ G R DRTG GT S F + ++F L+K PLLTTK+V ++V+ Sbjct: 19 YQYLDLVREILDNGEHRPDRTGTGTYSIFAPRPLKFSLNKDGTPILPLLTTKRVFSRAVI 78 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101 ELLWF+ G ++ L GV IWD ++ G+LGP+YG QWR + Sbjct: 79 LELLWFVSGATSAKPLSDAGVKIWDGNGSREFLDGLGLQHREVGDLGPVYGFQWRHFGAE 138 Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQ++ +V LR +PY RR ++SAWN + M LPPCH QFYV Sbjct: 139 YTDCHADYTGQGVDQLAEVVHKLRTNPYDRRMVLSAWNPKDLKLMVLPPCHMFAQFYVSY 198 Query: 156 --------------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 G L CQLYQRS D+ LG+PFNIASY+LLT M+A Sbjct: 199 PKAGSDSNGNGNTTEGADQTSSPSKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIA 258 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-PNIVD-----LLSFR 243 G G H +GD H+Y +H + QL R PR P++ IN P + + + ++ Sbjct: 259 RATGLVPGSLTHVMGDAHVYADHVDALRTQLEREPRPFPELEINRPEVPEGGDGVIDGWK 318 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 EDF ++ Y+PH AI K+SV Sbjct: 319 LEDFVIKGYDPHKAIAMKMSV 339 >gi|3033367|gb|AAC12816.1| thymidylate synthase [Enterobacteria phage T4] gi|299780595|gb|ADJ39957.1| dTMP (thymidylate) synthase [Enterobacteria phage T4T] Length = 286 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 124/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMIIN------------PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I+ + +L R +DF L +Y H I K++V Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286 >gi|9632831|ref|NP_049848.1| dTMP (thymidylate) synthase [Enterobacteria phage T4] gi|136606|sp|P00471|TYSY_BPT4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157833959|pdb|1TIS|A Chain A, Crystal Structure Of Thymidylate Synthase From T4 Phage gi|5354455|gb|AAD42662.1|AF158101_249 dTMP (thymidylate) synthase [Enterobacteria phage T4] gi|215853|gb|AAA32492.1| thymidylate synthase [Enterobacteria phage T4] Length = 286 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 124/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGSKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMIIN------------PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I+ + +L R +DF L +Y H I K++V Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286 >gi|119179951|ref|XP_001241483.1| conserved hypothetical protein [Coccidioides immitis RS] gi|303321055|ref|XP_003070522.1| thymidylate synthase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110218|gb|EER28377.1| thymidylate synthase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320036037|gb|EFW17977.1| thymidylate synthase [Coccidioides posadasii str. Silveira] Length = 357 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 172/319 (53%), Gaps = 56/319 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GT + F Q+RF LSK PLLTTK+ Sbjct: 39 HQYLNLIRTILATGEHRPDRTGTGTCAIFAPPQLRFSLSKPGPTPSSTPIPILPLLTTKR 98 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+YG Q Sbjct: 99 VFLRAVILELLWFISGCTSSLTLSEAGVKIWDGNGSREFLDSVGLSHREVGDLGPVYGFQ 158 Query: 98 WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPCH Sbjct: 159 WRHFGAEYVDAKADYSGKGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPCHMF 218 Query: 150 FQFYVD---------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 QFYV G L+C LYQRS D+ LG+PFNIASY+LLT ML Sbjct: 219 AQFYVSFCNAALPEMENGTNEDADKKQKGTLNCLLYQRSCDMGLGVPFNIASYALLTHML 278 Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN---IVDLLSFRYE 245 A G IHT+GD H+Y +H QL+R P T P++ IN D+ + Sbjct: 279 AHAADLYPGTLIHTMGDAHVYLDHIAALQEQLTREPTTFPELRINRTDRGSGDMDGWAEG 338 Query: 246 DFTLRSYEPHAAILAKVSV 264 DF + Y+PH I K+SV Sbjct: 339 DFEVIGYKPHKMIKMKMSV 357 >gi|311993229|ref|YP_004010095.1| dTMP thymidylate synthase [Enterobacteria phage CC31] gi|284178067|gb|ADB81733.1| dTMP thymidylate synthase [Enterobacteria phage CC31] Length = 348 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 123/289 (42%), Positives = 170/289 (58%), Gaps = 34/289 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L++H+ G DRTG GT + FG Q+RFDL +GFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQQLIQHIFDEGYVTDDRTGTGTCAVFGTQLRFDLQEGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WFL G +NV+ L +G ++WD+ + DGELGP+YG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLRQHGSPTNGKTVWDDNYENQARSMGYVDGELGPVYGKQWR---DFM 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQ++ ++ ++ P RR IV+AWN I KMALPPCH ++QF V NG L Q YQ Sbjct: 118 G--VDQLTLVINRIKELPNDRRQIVTAWNPLDIPKMALPPCHMIYQFNVRNGLLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G + G + T G+ H+Y+NH EQ + L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALIHIVAKMTGLKPGHLVFTGGNTHIYSNHIEQCEEILRREPK 235 Query: 226 TLPQMIINPNI-------------VDLLSFRYEDFTLRSYEPHAAILAK 261 L + I+ I ++ + EDF L +YE H I K Sbjct: 236 ELCNLEIDFPIEFERWQTSSQLKWINRFAV-IEDFKLVNYESHPTIKGK 283 >gi|116204425|ref|XP_001228023.1| hypothetical protein CHGG_10096 [Chaetomium globosum CBS 148.51] gi|88176224|gb|EAQ83692.1| hypothetical protein CHGG_10096 [Chaetomium globosum CBS 148.51] Length = 348 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 131/325 (40%), Positives = 175/325 (53%), Gaps = 62/325 (19%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R ++ G R DRTG GT S F + ++F L++ PLLTTK+V K+V+ Sbjct: 24 YQYLDLVREILDEGELRSDRTGTGTYSIFAPRPLKFSLNRDGVPILPLLTTKRVFTKAVI 83 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWR----- 99 ELLWF+ GD++ L GV IWD E+ DK +G+LGP+YG QWR Sbjct: 84 AELLWFISGDTSSHTLSSQGVKIWDGNGSREFLDKLGLTSRAEGDLGPVYGFQWRHFGAQ 143 Query: 100 ---SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154 S DY G +DQ++ IV +LR +P+ RR ++SAWN A + M LPPCH QFYV Sbjct: 144 YVDSATDYTGKGVDQLARIVHTLRTNPFDRRLVLSAWNPADMPSMVLPPCHMFAQFYVSY 203 Query: 155 ---------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 G L+CQLYQRS D+ LG+PFNIASY+LLT M Sbjct: 204 PGGARRSHTTTTTTTNPEQTPTPPPAKSKGHLNCQLYQRSCDMGLGVPFNIASYALLTHM 263 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN--------PNIVDL 239 LA V G H +GD H+Y NH E QL R PR P++ I+ + Sbjct: 264 LAHVCDLVPGSLTHVMGDAHVYLNHVEALQTQLEREPRPFPELEISEERQGRGPAEERSI 323 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++ EDF ++ Y PH I ++SV Sbjct: 324 DGWKAEDFLIKGYNPHKIIPMEMSV 348 >gi|12230765|sp|Q9P4T7|TYSY_AGABI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|8918939|emb|CAB96042.1| thymidylate synthase [Agaricus bisporus] Length = 296 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 128/291 (43%), Positives = 164/291 (56%), Gaps = 29/291 (9%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+R V+ G R DRTG GT S F +RF L + PLLTTK+ + +V ELL Sbjct: 6 QYLHLIRRVLDTGDLRPDRTGTGTISLFAPPNLRFSLRESTVPLLTTKRTFLRGIVEELL 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101 WF G ++ L GV IWD K +G+LGP+YG QWR + Sbjct: 66 WFTNGLTDSKILSDKGVKIWDGNGSKAFLESRGLGHRREGDLGPVYGFQWRHFGAEYEDC 125 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DN 156 DY G +DQ+ ++ ++ +P RR I+SAWN I MALPPCH L QFYV D Sbjct: 126 DADYAGKGVDQLRECIRKIKENPTDRRIILSAWNPKDIPSMALPPCHMLCQFYVHLPADT 185 Query: 157 GK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 K LSC ++QRS D+ LGIPFNIASY+LLT M+A V G E I LGD H+Y +H E Sbjct: 186 AKPELSCLMFQRSADLGLGIPFNIASYALLTHMIAHVTGTTARELIIQLGDAHVYRDHVE 245 Query: 215 QADLQLSRSPRTLPQMI-INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++QL R PR P++ I D+ F Y DF + Y PH +I K+SV Sbjct: 246 ALEVQLQREPRPFPKLRWARDGITDIEDFEYSDFVIEGYNPHPSIAMKMSV 296 >gi|228861545|ref|YP_002854566.1| thymidylate synthetase [Enterobacteria phage RB14] gi|32709463|gb|AAP86750.1| thymidylate synthase [Enterobacteria phage RB14] gi|227438561|gb|ACP30874.1| thymidylate synthetase [Enterobacteria phage RB14] Length = 286 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 127/291 (43%), Positives = 173/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWD---EWADKD-----GELGPIYGVQWRSWPDYD 105 WF+ G +NV+ L G +IWD E KD GELGPIYG QWR D+ Sbjct: 61 WFISGSTNVNDLRLRTHGSLIQGKTIWDDNYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQ+ + ++ P RR IVSAWN A I++MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQLVETIDRIKKLPTDRRQIVSAWNPAEINQMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ LT ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLIFSGGNTHIYMNHTEQCKEILRREPK 235 Query: 226 TLPQMIINPNI----VDLLSFRY--------EDFTLRSYEPHAAILAKVSV 264 L ++ I+ I D + Y +DF L +YE H AI K+++ Sbjct: 236 ELCELKIDWPIEFGNCDTETQLYWLTEYMKPKDFILENYESHPAIKGKMAI 286 >gi|212531339|ref|XP_002145826.1| thymidylate synthase [Penicillium marneffei ATCC 18224] gi|210071190|gb|EEA25279.1| thymidylate synthase [Penicillium marneffei ATCC 18224] Length = 311 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 122/304 (40%), Positives = 168/304 (55%), Gaps = 41/304 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-----YQMRFDLSKGFPLLTTKKVHWKSVV 56 +QYLDL+R ++ G R DRTG GT S F +Q+ + PLLTTK+V ++V+ Sbjct: 8 NQYLDLIREILDHGERRPDRTGTGTLSIFAPRPFKFQLNDNGRPILPLLTTKRVFLRAVI 67 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101 ELLWF+ G+++ L+ GV IWD ++ G+LGP+YG QWR + Sbjct: 68 AELLWFIEGNTSSIALNEVGVKIWDGNGSREFLDNLGLTHREVGDLGPVYGFQWRHFGAE 127 Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQI+ I+ LR +PY RR I++AWN + M LPPCH QFYV Sbjct: 128 YKDAKADYTGEGVDQIADIIHKLRNNPYDRRMILTAWNPKDLKLMVLPPCHMFAQFYVSF 187 Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 G L CQLYQRS D+ LG+PFNIASY+LLT MLA V G H Sbjct: 188 PGQGLAETTSENKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGSLTH 247 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILA 260 +GD H+Y +H + +QL R PR P++ I + ++ E+F ++ Y+PH AI Sbjct: 248 VMGDAHVYLDHVDALKVQLEREPRPFPELEITREKGASIDGWKAEEFVVKGYDPHKAIAM 307 Query: 261 KVSV 264 +SV Sbjct: 308 NMSV 311 >gi|257079026|ref|ZP_05573387.1| thymidylate synthase [Enterococcus faecalis JH1] gi|256987056|gb|EEU74358.1| thymidylate synthase [Enterococcus faecalis JH1] Length = 234 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%) Query: 82 EWADKDGELGPIYGVQWRSWPDYDGN--VIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 E+A+K GELG IYG QWR W DGN IDQ++++++ ++ +P SRR IVSAWN + Sbjct: 50 EFAEKYGELGNIYGAQWRHWETKDGNGSFIDQLANVIEMIKTNPDSRRLIVSAWNPEDVP 109 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G GEF Sbjct: 110 SMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETGLAVGEF 169 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 +HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+PH I Sbjct: 170 VHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYDPHPTIK 229 Query: 260 AKVSV 264 A ++V Sbjct: 230 APIAV 234 >gi|308814595|ref|YP_003934869.1| thymidylate synthase [Shigella phage SP18] gi|308206187|gb|ADO19586.1| thymidylate synthase [Shigella phage SP18] Length = 286 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 124/291 (42%), Positives = 168/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL++ V G DRTG GT +TFG ++ +D+S+GFP T K++ +KSVV ELL Sbjct: 1 MKNYQDLIQTVFDIGYQTDDRTGTGTIATFGTKVEWDMSEGFPATTVKRLAYKSVVGELL 60 Query: 61 WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WFL G +NV L HG +IWD+ + DGELGP+YG QWR D+ Sbjct: 61 WFLEGSTNVERLREITHGAGSDKKTIWDQNFEAQGRALGYVDGELGPVYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQ+ ++ ++ P RR IVSAWN A + +MALPPCH L+QF V +G+L YQ Sbjct: 118 G--VDQLVETIEKVKKVPTDRRQIVSAWNPAELKQMALPPCHLLYQFNVHDGELDLLWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PF+I SY L ++A + G + G+ + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFDIGSYGTLLHIVAKMTGLKPGKLVFMGGNTHIYLNHIEQCKEVLRREPK 235 Query: 226 TLPQMIIN-PNIVDLLSFRYE-----------DFTLRSYEPHAAILAKVSV 264 TLP + IN P L + DF L +YEPH I A ++V Sbjct: 236 TLPTLKINWPEQFHLWDTEMQLYWVTRHMSPADFVLENYEPHPTIAAPMAV 286 >gi|156049499|ref|XP_001590716.1| hypothetical protein SS1G_08456 [Sclerotinia sclerotiorum 1980] gi|154692855|gb|EDN92593.1| hypothetical protein SS1G_08456 [Sclerotinia sclerotiorum 1980 UF-70] Length = 354 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 128/314 (40%), Positives = 174/314 (55%), Gaps = 53/314 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG-----FPLLTTKKVHWKSV 55 +QYLDL+R +++ G R DRTG GT S F ++F L+ PLLTTK+V ++V Sbjct: 43 YQYLDLIREILETGEHRPDRTGTGTISLFAPAPLKFSLTSPTGTPILPLLTTKRVFLRAV 102 Query: 56 VHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR---- 99 + ELLWF+ G ++ L G+ IWD + +G+LGP+YG QWR Sbjct: 103 LTELLWFISGSTSSLPLSAAGIKIWDGNGSRTYLDSIGLSHRAEGDLGPVYGFQWRHFGA 162 Query: 100 ----SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD 155 + DY G +DQ++ IV L+ +P+ RR I+SAWNVA I MALPPCH QFYV Sbjct: 163 KYIDAETDYTGQGVDQLAEIVWKLKNNPWDRRIILSAWNVADIKLMALPPCHMFAQFYVS 222 Query: 156 --------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 G L CQLYQRS D+ LG+PFNIASY+LLT +LA Sbjct: 223 FPKTPDSSTSEANTNPESKPKGILHCQLYQRSCDMGLGVPFNIASYALLTHILAHACNLT 282 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII-----NPNIVDLLSFRYEDFTLR 250 G F HT+GD H+Y +H + +QL R PR P++ I +VD ++ E+F +R Sbjct: 283 PGTFTHTMGDAHVYVDHVDALKIQLEREPREFPELGILREDRGSGVVD--GWKGEEFEVR 340 Query: 251 SYEPHAAILAKVSV 264 Y+PH I K+SV Sbjct: 341 GYKPHGKIDMKMSV 354 >gi|326475782|gb|EGD99791.1| thymidylate synthase [Trichophyton tonsurans CBS 112818] Length = 351 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 133/312 (42%), Positives = 174/312 (55%), Gaps = 49/312 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK------------GFPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 40 HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPLLPLLTTK 99 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159 Query: 97 QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ +V+ L+ PY RR I+SAWN A + KMALPPCH Sbjct: 160 QWRHFGAEYVDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219 Query: 149 LFQFYV--------DNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 QFYV D GK LSC LYQRS D+ LG+PFNIASY+LLT M A Sbjct: 220 FAQFYVSFPPQKAGDEGKKGKGILSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN---IVDLLSFRYEDFTLRSY 252 G FIHT+GD H+Y +H E QL+R P P + IN ++ ++ DF + Y Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339 Query: 253 EPHAAILAKVSV 264 +PH I K+S+ Sbjct: 340 KPHKLIKMKMSI 351 >gi|258539604|ref|YP_003174103.1| thymidylate synthase [Lactobacillus rhamnosus Lc 705] gi|257151280|emb|CAR90252.1| Thymidylate synthase [Lactobacillus rhamnosus Lc 705] Length = 256 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 112/256 (43%), Positives = 148/256 (57%), Gaps = 50/256 (19%) Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWA---------------------------------- 84 +LWFL GD+N+ +L +H IWDEWA Sbjct: 1 MLWFLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHE 60 Query: 85 ----------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR Sbjct: 61 EMAKFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRL 120 Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 IVSAWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++ Sbjct: 121 IVSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLV 180 Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFT 248 A G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D Sbjct: 181 AHECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIK 240 Query: 249 LRSYEPHAAILAKVSV 264 L +Y+P+ AI A V+V Sbjct: 241 LLNYDPYPAIKAPVAV 256 >gi|32709477|gb|AAP86757.1| thymidylate synthase [Enterobacteria phage U5] Length = 286 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 126/291 (43%), Positives = 172/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWD---EWADKD-----GELGPIYGVQWRSWPDYD 105 WF+ G +NV+ L G +IWD E KD GELGPIYG QWR D+ Sbjct: 61 WFISGSTNVNDLRLRTHGSLIQGKTIWDDNYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQ+ + ++ P RR IVSAWN A I++MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQLVETIDRIKKLPTDRRQIVSAWNPAEINQMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ LT ++A + G+ I + G+ H+Y NH Q L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLIFSGGNTHIYMNHTAQCKEILRREPK 235 Query: 226 TLPQMIINPNI----VDLLSFRY--------EDFTLRSYEPHAAILAKVSV 264 L ++ I+ I D + Y +DF L +YE H AI K+++ Sbjct: 236 ELCELKIDWPIEFGNCDTETQLYWLTEYMKPKDFILENYESHPAIKGKMAI 286 >gi|242772690|ref|XP_002478088.1| thymidylate synthase [Talaromyces stipitatus ATCC 10500] gi|218721707|gb|EED21125.1| thymidylate synthase [Talaromyces stipitatus ATCC 10500] Length = 312 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 123/305 (40%), Positives = 168/305 (55%), Gaps = 42/305 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R + G R DRTG GT S F + +F L+ PLLTTK+V ++V+ Sbjct: 8 NQYLDLIRDIFDHGEQRPDRTGTGTLSIFAPRPFKFKLNDNGRPILPLLTTKRVFLRAVI 67 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101 ELLWF+ G+++ L+ GV IWD ++ G+LGP+YG QWR + Sbjct: 68 AELLWFIEGNTSSIALNEVGVKIWDGNGSREFLDNLGLTHREVGDLGPVYGFQWRHFGAG 127 Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQI+ I+ LR +PY RR I++AWN + M LPPCH QFYV Sbjct: 128 YIDAKADYTGQGVDQIADIIHKLRTNPYDRRMILTAWNPKDLRLMVLPPCHMFAQFYVSF 187 Query: 156 ---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 G L CQLYQRS D+ LG+PFNIASY+LLT MLA G Sbjct: 188 PGQGLAKNGTTENKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHACDLVPGSLT 247 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 H +GD H+Y +H + +QL R PR P++ I + + ++ EDF ++ Y+PH AI Sbjct: 248 HVMGDAHVYLDHVDALKVQLEREPRPFPELEITHEKGGSIDGWKAEDFVVKGYDPHKAIA 307 Query: 260 AKVSV 264 +SV Sbjct: 308 MNMSV 312 >gi|164659149|ref|XP_001730699.1| hypothetical protein MGL_2153 [Malassezia globosa CBS 7966] gi|159104596|gb|EDP43485.1| hypothetical protein MGL_2153 [Malassezia globosa CBS 7966] Length = 535 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 120/297 (40%), Positives = 168/297 (56%), Gaps = 34/297 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG--YQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 +QYL+L+ +I+ G R DRTG GT + F ++FDLS G PLLTTK+V ++ V+ E Sbjct: 239 YQYLNLVSSIIRHGEIRADRTGTGTIAQFAPTRTLKFDLSGGKLPLLTTKRVFFRGVLEE 298 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW----- 101 LLWF+ G ++ L V IWD ++G+LGPIYG QWR + Sbjct: 299 LLWFIAGCTDAKRLSERDVHIWDGNGSLEFLQRRGLSHRREGDLGPIYGFQWRHFGAKYI 358 Query: 102 ---PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---- 154 DY G +DQ++ ++ +R +P RR ++ AWN A +D MALPPCH L QF+V Sbjct: 359 DADTDYTGQGVDQLAQVIHQIRHNPADRRILLCAWNPADLDSMALPPCHILCQFFVSMPT 418 Query: 155 -------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVH 207 +L CQ+YQRS D+ LG+PFNIASYSLLT +A+V + EF +GD H Sbjct: 419 TDAMSKGQRPRLKCQMYQRSCDLGLGVPFNIASYSLLTHFIAAVTDCEAAEFTLVMGDAH 478 Query: 208 LYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Y +H QL R+PR P + I N+ + R +D L +Y PH I ++SV Sbjct: 479 VYLDHVHPLQEQLRRTPRAFPTVHIRRNVTSIDEIRPDDVQLLNYSPHGKINMQMSV 535 >gi|154317591|ref|XP_001558115.1| hypothetical protein BC1G_03147 [Botryotinia fuckeliana B05.10] gi|150844321|gb|EDN19514.1| hypothetical protein BC1G_03147 [Botryotinia fuckeliana B05.10] Length = 356 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 128/318 (40%), Positives = 174/318 (54%), Gaps = 57/318 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG-----FPLLTTKKVHWKSV 55 +QYLDL+R +++ G R DRTG GT S F ++F L+ PLLTTK+V ++V Sbjct: 41 YQYLDLIREILETGEHRPDRTGTGTISLFAPAPLKFSLTSPTGTPILPLLTTKRVFLRAV 100 Query: 56 VHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR---- 99 + ELLWF+ G ++ L G+ IWD + +G+LGP+YG QWR Sbjct: 101 LTELLWFISGSTSSLPLSAAGIKIWDGNGSRAYLDSIGLSHRAEGDLGPVYGFQWRHFGA 160 Query: 100 ----SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD 155 + DY G +DQ++ IV L+ +P+ RR I+SAWNVA I MALPPCH QFYV Sbjct: 161 KYIDAETDYTGQGVDQLAEIVWKLKNNPWDRRIILSAWNVADIKLMALPPCHMFAQFYVS 220 Query: 156 ------------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 G L CQLYQRS D+ LG+PFNIASY+LLT +LA Sbjct: 221 FPKSSTASSTSEQNTNPSNPDSKPKGILHCQLYQRSCDMGLGVPFNIASYALLTHILAHA 280 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII-----NPNIVDLLSFRYED 246 G F HT+GD H+Y +H + +QL R PR P++ I +VD ++ E+ Sbjct: 281 CDLTPGTFTHTMGDAHVYVDHVDALKVQLEREPREFPELGILREDQGSGVVD--GWKPEE 338 Query: 247 FTLRSYEPHAAILAKVSV 264 F +R Y+PH I K+SV Sbjct: 339 FEVRGYKPHGKIDMKMSV 356 >gi|328462355|gb|EGF34425.1| thymidylate synthase [Lactobacillus rhamnosus MTCC 5462] Length = 255 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 112/255 (43%), Positives = 148/255 (58%), Gaps = 50/255 (19%) Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84 +WFL GD+N+ +L +H IWDEWA Sbjct: 1 MWFLHGDTNIRFLLQHKNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEE 60 Query: 85 ----------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 D D G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR I Sbjct: 61 MAKFDDKVLHDDDFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLI 120 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 121 VSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVA 180 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L Sbjct: 181 HECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKL 240 Query: 250 RSYEPHAAILAKVSV 264 +Y+P+ AI A V+V Sbjct: 241 LNYDPYPAIKAPVAV 255 >gi|145248694|ref|XP_001400686.1| thymidylate synthase [Aspergillus niger CBS 513.88] gi|134081354|emb|CAK41856.1| unnamed protein product [Aspergillus niger] Length = 356 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 130/321 (40%), Positives = 175/321 (54%), Gaps = 60/321 (18%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46 HQYL+L+R ++ G R DRTG GTRS F QMRF LSK PLLT Sbjct: 38 HQYLNLIRRILSEGEHRPDRTGTGTRSIFAPPQMRFSLSKPSTNTTTGIKEYTPILPLLT 97 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIY 94 TK+V ++V+ ELLWF+ G ++ L G+ IWD E+ DK G +LGP+Y Sbjct: 98 TKRVFLRAVLAELLWFISGTTSSLPLSEAGIKIWDGNGSREYLDKVGLSHREVGDLGPVY 157 Query: 95 GVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 G QWR + DY G +DQ++ +V+ L+ +P+ RR I+SAWN + MALPPC Sbjct: 158 GFQWRHFGAEYVDAKTDYSGQGVDQLAEVVKKLKENPFDRRIIMSAWNPKDMRIMALPPC 217 Query: 147 HCLFQFYV------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 H QFYV G L C LYQRS D+ LG+PFNIASY+LLT +L Sbjct: 218 HMFAQFYVRFPDAKRDEEGVVRDGEWGRGHLDCLLYQRSADMGLGVPFNIASYALLTHLL 277 Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFR 243 A + G +HTLGD H+Y +H + Q+ R P P++ I +VD ++ Sbjct: 278 AHAVDMVPGTLVHTLGDAHVYLDHVDALKEQIEREPVAFPEVRIKREDRGSGVVD--GWK 335 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 E+F + Y+PH AI K+SV Sbjct: 336 EEEFEVIGYKPHKAIKMKMSV 356 >gi|255936107|ref|XP_002559080.1| Pc13g06460 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583700|emb|CAP91715.1| Pc13g06460 [Penicillium chrysogenum Wisconsin 54-1255] Length = 336 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 130/315 (41%), Positives = 177/315 (56%), Gaps = 54/315 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----------FPLLTTKKV 50 HQYL+L+R ++ G R DRTG GT+S F Q+RF LSK PLLTTK+V Sbjct: 24 HQYLNLIRTILSEGEHRPDRTGTGTQSIFAPPQLRFSLSKPNPEGGEPIPILPLLTTKRV 83 Query: 51 HWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQW 98 ++V+ ELLWF+ G ++ L G+ IWD E+ DK +G+LGP+YG QW Sbjct: 84 FLRAVLAELLWFISGCTSSLPLSEAGIKIWDGNGSREFLDKSGLGHREEGDLGPVYGFQW 143 Query: 99 RSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150 R + DY G +DQ+ +V L +P+ RR I+SAWN A + KMALPPCH Sbjct: 144 RHFGAEYVDAKTDYSGQGVDQLKDVVHKLIHNPFDRRIIMSAWNPADLKKMALPPCHMFA 203 Query: 151 QFYV----------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 QFYV + G LSC LYQRS D+ LG+PFNIASY+LLT +LA Sbjct: 204 QFYVSFPPGMKLDEKTGRPSEKGTLSCVLYQRSCDMGLGVPFNIASYALLTHILAHAADL 263 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN-----IVDLLSFRYEDFTL 249 G IHT+GD H+Y +H + + QL R P P++ I + +VD ++ ++F + Sbjct: 264 HPGTLIHTMGDAHVYLDHIDALNEQLVREPTEFPELRIKRDDRGAAVVD--GWKEDEFEV 321 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I K+SV Sbjct: 322 IGYKPHKIIKMKMSV 336 >gi|2833319|sp|Q23695|DRTS_CRIFA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|162494|gb|AAA30318.1| dihydrofolate reductase-thymidylate synthetase [Crithidia fasciculata] Length = 515 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 120/283 (42%), Positives = 166/283 (58%), Gaps = 23/283 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L+ ++K G + DRTGVGT S FG QM PLLTTK+V W+ V EL+WF Sbjct: 235 QYLELIDRIMKTGLVKEDRTGVGTISLFGAQMFSLRDNQLPLLTTKRVFWRGVCEELIWF 294 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-PDYDG--- 106 LRG++N L + IWD E+ D K+ +LGP+YG QWR + DY G Sbjct: 295 LRGETNAHVLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGFDA 354 Query: 107 ---NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLSC 161 +DQI +IV++L+ + RR +V+AWN + KMA+ PCH L QFYV+ +LSC Sbjct: 355 NYDEGVDQIKTIVETLKTN--DRRLLVTAWNPCALHKMAVRPCHLLGQFYVNTQTKELSC 412 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQR D+ LG+PFNIASY+LLT+++A G + GE +HTLG H+Y+NH E QL Sbjct: 413 MLYQRCCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGTAHVYSNHVEALKEQLQ 472 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P ++ L + D + Y P+ I +++V Sbjct: 473 RVPVAFPVLVFKKEREFLEDYESTDMEVVDYVPYPPIKMEMAV 515 >gi|314121810|ref|YP_004063929.1| dTMP thymidylate synthase [Enterobacteria phage vB_EcoM-VR7] gi|313151567|gb|ADR32623.1| dTMP thymidylate synthase [Enterobacteria phage vB_EcoM-VR7] Length = 286 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 124/291 (42%), Positives = 167/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL++ V G DRTG GT +TFG ++ +D+S+GFP T K++ +KSVV ELL Sbjct: 1 MKNYQDLIQTVFDIGYQTDDRTGTGTIATFGTKVEWDMSEGFPATTVKRLAYKSVVGELL 60 Query: 61 WFLRGDSNVSYLHR--HG-----VSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WFL G +NV L HG +IWD+ + DGELGP+YG QWR D+ Sbjct: 61 WFLEGSTNVERLREITHGPDSDKKTIWDQNFEAQGRALGYVDGELGPVYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQ+ ++ ++ P RR IVSAWN A + +MALPPCH L+QF V +G+L YQ Sbjct: 118 G--VDQLVETIEKVKKVPTDRRQIVSAWNPAELKQMALPPCHLLYQFNVHDGELDLLWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PF+I SY L ++A + + G+ I G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFDIGSYGTLLHIVAKMTRLKPGKLIFMGGNTHIYLNHIEQCKEVLRREPK 235 Query: 226 TLPQMIIN-PNIVDLLSFRYE-----------DFTLRSYEPHAAILAKVSV 264 TLP + IN P L + DF L +YEPH I A ++V Sbjct: 236 TLPTLKINWPEQFQLWDTEMQLYWVTRHMSPGDFVLENYEPHPTIPAPMAV 286 >gi|290563146|ref|NP_001166836.1| thymidylate synthase isoform 2 [Bombyx mori] gi|87248621|gb|ABD36363.1| thymidylate synthase isoform 2 [Bombyx mori] Length = 255 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 106/227 (46%), Positives = 140/227 (61%), Gaps = 20/227 (8%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR------ 99 ELLW + G ++ L GV IWD + +G+LGP+YG QWR Sbjct: 29 ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 88 Query: 100 --SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 DY G IDQ+ S++ S++ +P RR ++ AWN + + KMALPPCHCL QFYV +G Sbjct: 89 IDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFYVADG 148 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 KLSC LYQRS D+ LG+PFNIASYSLLT M+A V G+Q GEFIHT GD H+Y NH E Sbjct: 149 KLSCLLYQRSADMGLGVPFNIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPLK 208 Query: 218 LQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +QL R P+ P + I + F+YEDF ++ Y+PH I +++V Sbjct: 209 IQLQREPKQFPTLEFARKIESIDDFKYEDFIIKDYKPHPKIEMEMAV 255 >gi|327409969|ref|YP_004347389.1| dihydrofolate reductase-thymidylate synthase [Lausannevirus] gi|326785143|gb|AEA07277.1| dihydrofolate reductase-thymidylate synthase [Lausannevirus] Length = 446 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 120/284 (42%), Positives = 160/284 (56%), Gaps = 24/284 (8%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL LL V+ +G +R+DRTG GT+S F + F ++S+ FPLLT KK +W ++ ELLWF Sbjct: 164 YLALLSQVVNYGDERQDRTGTGTKSLFAKTLHFPNVSENFPLLTVKKTNWDKILSELLWF 223 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SWP 102 L G ++ + L G IWD A K+ G+ GPIY QWR Sbjct: 224 LSGSTDATILKEKGNDIWDGNASKEFQEKVGLSHYEEGDCGPIYPFQWRHAGAKYVDCKK 283 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G DQI +V+ ++ DP SRR ++ +WNVA +DKM LPPCH FQ YV K+ Q Sbjct: 284 DYTGEGKDQILEMVRLIQEDPTSRRILLESWNVADLDKMVLPPCHKTFQVYVRGDKIDGQ 343 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS D+ LG+PFNIASY+ L +LA G G GDVH+Y NH E A L R Sbjct: 344 VYQRSADLALGVPFNIASYACLLSLLAKRTGKSAGNLTLCFGDVHVYKNHMENAQKMLER 403 Query: 223 SPRTLPQMIINPNIVD--LLSFRYEDFTLRSYEPHAAILAKVSV 264 P P + I NI D L DF L+ Y+ ++A+ ++V Sbjct: 404 VPHRPPILEI-VNIADDTLKKLEPSDFVLKDYKSYSALNFAMAV 446 >gi|116326450|ref|YP_803170.1| thymidylate synthetase [Enterobacteria phage RB32] gi|32709461|gb|AAP86749.1| thymidylate synthase [Enterobacteria phage RB32] gi|115344043|gb|ABI95052.1| thymidylate synthetase [Enterobacteria phage RB32] Length = 286 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 125/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235 Query: 226 TLPQMIIN-PNIVD----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264 L ++ + P+ D L F + +F L +YE H +I K++V Sbjct: 236 DLCELQLKFPDEFDEWDTESQVFWLSQFVKPHNFVLNNYESHPSIKGKMAV 286 >gi|281335085|gb|ADA62169.1| Thymidylate synthase [Staphylococcus aureus] Length = 215 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 101/184 (54%), Positives = 127/184 (69%), Gaps = 1/184 (0%) Query: 81 DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 D +A K G LG +YG QWR W D +GN DQ+ S++Q ++ +P SRRHIVSAWN ID Sbjct: 33 DAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAWNPTEIDS 92 Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 MALPPCH +FQFYV GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A G + GEFI Sbjct: 93 MALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECGLEVGEFI 152 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260 HT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE H AI A Sbjct: 153 HTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYESHPAIKA 211 Query: 261 KVSV 264 ++V Sbjct: 212 PIAV 215 >gi|322701545|gb|EFY93294.1| thymidylate synthase [Metarhizium acridum CQMa 102] Length = 335 Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 121/315 (38%), Positives = 174/315 (55%), Gaps = 52/315 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R +++ G R DRTG GT S F + ++F L++ PLLTTK+V ++V+ Sbjct: 21 YQYLDLIREILEEGEQRFDRTGTGTISIFAPRPLKFSLNRDGAPILPLLTTKRVFLRAVI 80 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--- 101 ELLWF+ +++ L GV IWD E+ D ++G+LGP+YG QWR + Sbjct: 81 AELLWFIEANTSSKALSDVGVKIWDGNGSREFLDNLGLTHREEGDLGPVYGFQWRHFGAE 140 Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154 DY G +DQ++ ++ L+ PY RR I+SAWN + MALPPCH QFYV Sbjct: 141 YVDAKTDYTGQGVDQLADVIDKLKNKPYDRRIIMSAWNARDLHLMALPPCHVFAQFYVSY 200 Query: 155 ------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 + G L CQLYQRS D+ LG+PFNIASY+LLT M+A Sbjct: 201 PSRRRRNGKPSSMETNGGPTSTAPEKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIAH 260 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTL 249 V G H +GD H+Y +H + ++QL R PR P++ I + ++ ED + Sbjct: 261 VCDLVPGSLTHVMGDAHVYADHEDALNIQLEREPRQFPEVEIARERGCGIDGWKVEDIIV 320 Query: 250 RSYEPHAAILAKVSV 264 + Y+PH I K++V Sbjct: 321 KGYDPHKTIAMKMAV 335 >gi|322705675|gb|EFY97259.1| thymidylate synthase [Metarhizium anisopliae ARSEF 23] Length = 335 Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 120/315 (38%), Positives = 174/315 (55%), Gaps = 52/315 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56 ++YLDL+R +++ G R DRTG GT S F + ++F L++ PLLTTK+V ++V+ Sbjct: 21 YRYLDLIREILEEGEQRPDRTGTGTISIFAPRPLKFSLNQDGTPILPLLTTKRVFLRAVI 80 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--- 101 ELLWF+ +++ L GV IWD E+ D ++G+LGP+YG QWR + Sbjct: 81 AELLWFIEANTSSKALSDVGVKIWDGNGSREFLDNLGLTHREEGDLGPVYGFQWRHFGAE 140 Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154 DY G +DQ++ ++ L+ PY RR I+SAWN + MALPPCH QFYV Sbjct: 141 YVDAKTDYTGQGVDQLADVIDKLKNKPYDRRIIISAWNARDLHLMALPPCHVFAQFYVSY 200 Query: 155 ------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 + G L CQLYQRS D+ LG+PFNIASY+LLT M+A Sbjct: 201 PSRRRRNGMASSTETNGSATSTAPEKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIAH 260 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTL 249 V G H +GD H+Y +H + ++QL R PR P++ I + ++ ED + Sbjct: 261 VCDLVPGSLTHVMGDAHVYADHEDALNIQLEREPRQFPEVEIAREKGCGIDGWKVEDIIV 320 Query: 250 RSYEPHAAILAKVSV 264 + Y+PH I K++V Sbjct: 321 KGYDPHKTIAMKMAV 335 >gi|71013081|ref|XP_758554.1| hypothetical protein UM02407.1 [Ustilago maydis 521] gi|46098212|gb|EAK83445.1| hypothetical protein UM02407.1 [Ustilago maydis 521] Length = 554 Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 124/295 (42%), Positives = 175/295 (59%), Gaps = 33/295 (11%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ--MRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYL+L++ VI G R DRTG GT + F Q +RFDL+ G PLLTTK+V ++ V+ EL Sbjct: 260 QYLELVQRVISTGESRPDRTGTGTLALFAPQPSLRFDLTNGTLPLLTTKRVFFRGVLEEL 319 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------ 101 LWF+ G ++ L V IWD + +G+LGP+YG QWR + Sbjct: 320 LWFVGGKTDAKLLTEKSVHIWDGNGSRAFLDSRGLSHRREGDLGPVYGFQWRHFGATYKD 379 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--- 156 DY G +DQ++S++ +R +P RR ++SAWN A ++ MALPPCH QF+V N Sbjct: 380 CDTDYAGQGVDQLASVIDKIRNNPTDRRILLSAWNPADLELMALPPCHMFAQFFVSNLDA 439 Query: 157 -----GK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 GK LSCQ+YQRS D+ LG+PFNIASY+LLT M+A V + E I +GD H+Y Sbjct: 440 YSKGQGKKHLSCQMYQRSCDLGLGVPFNIASYALLTYMIAKVTDCEPKELILAMGDAHVY 499 Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + QL R P P++ I ++ D+ F ++DF ++ Y+ H I K+SV Sbjct: 500 KDHVQPLKAQLERDPLPFPKLKIERDVKDIDDFTFDDFVVQGYKCHGKIDMKMSV 554 >gi|332975724|gb|EGK12607.1| thymidylate synthase [Psychrobacter sp. 1501(2011)] Length = 211 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 106/190 (55%), Positives = 137/190 (72%), Gaps = 16/190 (8%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL+R+V G+++ DRTG GTRS FG Q+RFDLS GFPLLTTKKVH KS+ +EL WFL Sbjct: 11 YLDLIRYVRDHGTEKGDRTGTGTRSHFGAQLRFDLSDGFPLLTTKKVHMKSITYELFWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADK---------DGELGPIYGVQWRSW-----PD--YDGN 107 +GD++V YL +GV IW+EW+ +GELGPIYG QWR++ PD Y+ + Sbjct: 71 KGDTHVKYLQDNGVRIWNEWSTAEQTARFGRPEGELGPIYGHQWRNYGASKKPDGSYNQD 130 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQI +++ ++ +P SRR IVS WN A ++ALPPCH LFQF+V +GKLSCQLYQRS Sbjct: 131 GVDQIVEVIEQIKNNPNSRRLIVSGWNPAEATQVALPPCHTLFQFFVADGKLSCQLYQRS 190 Query: 168 GDVFLGIPFN 177 D+FL P N Sbjct: 191 ADLFLLYPHN 200 >gi|321258400|ref|XP_003193921.1| thymidylate synthase [Cryptococcus gattii WM276] gi|317460391|gb|ADV22134.1| thymidylate synthase [Cryptococcus gattii WM276] Length = 317 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 122/297 (41%), Positives = 166/297 (55%), Gaps = 34/297 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +QYLDL++ +I G R DRTG GT + F RF L+ PLLTTK+V + V+ EL Sbjct: 21 YQYLDLIKRIINTGEVRPDRTGTGTVTLFAPPSFRFSLANNTLPLLTTKRVFLRGVIAEL 80 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR----SWPD 103 LWF+ G ++ L GV IWD +K+ G+LGP+YG QWR + D Sbjct: 81 LWFVSGCTDAKVLSSQGVGIWDGNGNKEFLEKVGLGHRREGDLGPVYGFQWRHFGAEYTD 140 Query: 104 YDGNV----IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DGN +DQ+ ++ +++ +P RR I+SAWN + MALPPCH QFYV Sbjct: 141 ADGNYKGKGVDQLQRVIDTIKNNPTDRRIILSAWNPKDLPLMALPPCHMFCQFYVSLPPA 200 Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 KLSC +YQRS D+ LG+PFNIASY+LLT M+A + + EFI +GD H+Y Sbjct: 201 DSPNSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYR 260 Query: 211 NHFEQADLQLSRSPRTLPQMI---INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H E QL R PR P++ I D+ F+ EDF + Y+P I K+S Sbjct: 261 DHVEPLKTQLEREPREFPKLKWARSKEEIGDIDGFKVEDFEVEGYKPWGKIDMKMSA 317 >gi|58260182|ref|XP_567501.1| thymidylate synthase [Cryptococcus neoformans var. neoformans JEC21] gi|134116550|ref|XP_772947.1| hypothetical protein CNBJ2230 [Cryptococcus neoformans var. neoformans B-3501A] gi|1174839|sp|P45351|TYSY_CRYNE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|83753957|pdb|2AAZ|A Chain A, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753958|pdb|2AAZ|B Chain B, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753959|pdb|2AAZ|C Chain C, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753960|pdb|2AAZ|D Chain D, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753961|pdb|2AAZ|E Chain E, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753962|pdb|2AAZ|F Chain F, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753963|pdb|2AAZ|G Chain G, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753964|pdb|2AAZ|H Chain H, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753965|pdb|2AAZ|I Chain I, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753966|pdb|2AAZ|J Chain J, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753967|pdb|2AAZ|K Chain K, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753968|pdb|2AAZ|L Chain L, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753969|pdb|2AAZ|M Chain M, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753970|pdb|2AAZ|N Chain N, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753971|pdb|2AAZ|O Chain O, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753972|pdb|2AAZ|P Chain P, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|602128|gb|AAC48931.1| thymidylate synthase [Cryptococcus neoformans var. neoformans] gi|50255567|gb|EAL18300.1| hypothetical protein CNBJ2230 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229551|gb|AAW45984.1| thymidylate synthase [Cryptococcus neoformans var. neoformans JEC21] Length = 317 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 122/297 (41%), Positives = 167/297 (56%), Gaps = 34/297 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +QYLDL+R +I G R DRTG GT + F RF L+ PLLTTK+V + V+ EL Sbjct: 21 YQYLDLIRRIINVGEVRPDRTGTGTVALFAPPSFRFSLADNTLPLLTTKRVFLRGVIAEL 80 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IWD E+ +K +G+LGP+YG QWR + Sbjct: 81 LWFVSGCTDAKMLSSQGVGIWDGNGSKEFLEKVGLGHRREGDLGPVYGFQWRHFGAEYTD 140 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ+ ++ +++ +P RR I+SAWN + MALPPCH QF+V Sbjct: 141 ADGDYKGKGVDQLQRVIDTIKNNPTDRRIILSAWNPKDLPLMALPPCHMFCQFFVSLPPA 200 Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 KLSC +YQRS D+ LG+PFNIASY+LLT M+A + + EFI +GD H+Y Sbjct: 201 DSPGSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYR 260 Query: 211 NHFEQADLQLSRSPRTLPQMI---INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H E QL R PR P++ I D+ F+ EDF + Y+P I K+S Sbjct: 261 DHVEPLKTQLEREPRDFPKLKWARSKEEIGDIDGFKVEDFVVEGYKPWGKIDMKMSA 317 >gi|254490316|ref|ZP_05103505.1| thymidylate synthase [Methylophaga thiooxidans DMS010] gi|224464449|gb|EEF80709.1| thymidylate synthase [Methylophaga thiooxydans DMS010] Length = 273 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 108/272 (39%), Positives = 151/272 (55%), Gaps = 37/272 (13%) Query: 30 FGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS-------NVSYLHRHGVSIWDE 82 FG +RFDLS+GFP TTK+V+WK+ E+LW L+G S N+ L V IW E Sbjct: 2 FGETLRFDLSEGFPAFTTKRVYWKTAFKEMLWMLKGKSKWGTGNPNIRDLLEQNVHIWSE 61 Query: 83 WADKD----------------------------GELGPIYGVQWRSWPDYDGNVIDQISS 114 W K G+LGP+YG QWR+W DG IDQ+S Sbjct: 62 WPHKKYVDETGDDITLKSFEERVLTDDEFASQWGDLGPVYGKQWRAWKTEDGREIDQVSE 121 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFL 172 +++ ++ +P SRR I WNV +D+MALPPCH +QF+VD G +S L QRS D FL Sbjct: 122 VLEQIKNNPTSRRIIFEGWNVGELDQMALPPCHKHYQFFVDPVKGTVSGSLVQRSADTFL 181 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G+ FN+ + +L+T ++A G+ GE + DVH+Y NH +Q QLSR P+ P+++I Sbjct: 182 GVAFNVCNLALITTLIAEHTGYMPGEIVWYGLDVHVYLNHLDQVREQLSREPKAFPKLVI 241 Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +D L Y+PH AI A V++ Sbjct: 242 KSKKKSLFDYTIDDLGLEGYDPHPAIKAPVAI 273 >gi|228861163|ref|YP_002854186.1| thymidylate synthetase [Enterobacteria phage RB51] gi|32709467|gb|AAP86752.1| thymidylate synthase [Enterobacteria phage RB61] gi|227438837|gb|ACP31149.1| thymidylate synthetase [Enterobacteria phage RB51] Length = 286 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 124/291 (42%), Positives = 170/291 (58%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELI 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILCREPM 235 Query: 226 TLPQMIIN-PNIVD----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264 L ++ + P+ D L F + +F L +YE H I K++V Sbjct: 236 DLCELQLKFPDEFDEWDTESQVFWLSQFAKPHNFVLNNYESHPPIKGKMAV 286 >gi|294644847|ref|ZP_06722587.1| thymidylate synthase [Bacteroides ovatus SD CC 2a] gi|292639785|gb|EFF58063.1| thymidylate synthase [Bacteroides ovatus SD CC 2a] Length = 151 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 96/151 (63%), Positives = 121/151 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISIFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG +YG QWRSWPDY+G IDQIS +V++L+ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 +P SRR IVSAWNVA ++ M LPPCH FQ Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQ 151 >gi|291287305|ref|YP_003504121.1| thymidylate synthase [Denitrovibrio acetiphilus DSM 12809] gi|290884465|gb|ADD68165.1| thymidylate synthase [Denitrovibrio acetiphilus DSM 12809] Length = 287 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 124/290 (42%), Positives = 164/290 (56%), Gaps = 29/290 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y D++R+V+ G +RTGV T S F Y R +L+ G+PLLTTKK+ + S+VHEL Sbjct: 1 MQVYKDMVRYVMDNGVYLPNRTGVATYSVFSYFYRVNLADGYPLLTTKKMFFNSMVHELF 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR------------SW------- 101 W+L G+ ++ L R IWD WAD++G L YG WR +W Sbjct: 61 WYLSGEEHIKDL-RTKTKIWDAWADEEGLLETAYGRFWRRFPVPEKGLNGENWGKKWTHK 119 Query: 102 -PDYDGNVIDQISSIVQSLRA---DP---YSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154 P+ V DQI ++ +L+ +P RR +VSAW+ A + LPPCH + F V Sbjct: 120 DPETGQMVFDQIQYVIDNLKEVKNNPNCSAQRRLVVSAWHPANAAESKLPPCHYTYCFSV 179 Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 GKL+C L QRSGD+ LGIPFN++ Y+LLTMMLA G + GEF HT+ D H+Y NH E Sbjct: 180 KAGKLNCHLTQRSGDIALGIPFNLSCYALLTMMLAKETGLKVGEFAHTIIDAHIYENHME 239 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P TLP++ I D LSF D L YE H I +V+V Sbjct: 240 GLKEQLEREPLTLPKVEIADKPFDQLSF--ADIKLVDYESHPGIRFEVAV 287 >gi|269120222|ref|YP_003308399.1| thymidylate synthase [Sebaldella termitidis ATCC 33386] gi|268614100|gb|ACZ08468.1| thymidylate synthase [Sebaldella termitidis ATCC 33386] Length = 289 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 123/292 (42%), Positives = 164/292 (56%), Gaps = 31/292 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++++V++ G + +RTGV T S F Y R DLS+G+PLLTTKK+++ S++ EL Sbjct: 1 MKQYLDMVKYVLENGIKKENRTGVDTISNFAYFYRVDLSEGYPLLTTKKMYFNSMLKELF 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVI------- 109 W+L G+ ++ L R IWD WAD++G L YG WR +P DG V Sbjct: 61 WYLSGEEHIKNL-RKDTKIWDAWADEEGRLETAYGRFWRRYPVPETHLDGEVFADESSKW 119 Query: 110 -----------DQISSIVQSLR---ADPY---SRRHIVSAWNVALIDKMALPPCHCLFQF 152 DQI ++ +L+ +P RR IV AWN LPPCH F F Sbjct: 120 VTRESNGQLVFDQIGYVIDTLKEMKTNPNHKNGRRLIVLAWNPGNAAISKLPPCHYTFAF 179 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 V KL+C L QRSGD+ LGIPFN+A YSLLTMM+A G++ GEF HT+ D H+Y NH Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEPGEFAHTIIDAHIYENH 239 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL R P L ++ I D L+F +D L Y H I +V+V Sbjct: 240 IEGLKEQLKREPLKLSKIEIADKPFDELTF--DDVKLVDYVSHPLIKFEVAV 289 >gi|284504438|ref|YP_003407153.1| bifunctional dihydrofolate reductase-thymidylate synthase [Marseillevirus] gi|282935876|gb|ADB04191.1| bifunctional dihydrofolate reductase-thymidylate synthase [Marseillevirus] Length = 444 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 110/275 (40%), Positives = 153/275 (55%), Gaps = 20/275 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFD-LSKGFPLLTTKKVHWKSVVHELLWF 62 YL LL V+ G R+DRTG GTRS FG + F+ +S+ FPL+T K++ W ++ ELLWF Sbjct: 164 YLSLLSEVLYSGEKRKDRTGTGTRSLFGRHLLFENISEKFPLITVKRMAWGCILSELLWF 223 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWRSW--------PD 103 L G ++ L +IW + + + +G+ GPIYG QWR W D Sbjct: 224 LSGSTDSKMLELQNNNIWKKNSSRKFLDGRGLSYREGDCGPIYGFQWRHWGAKYVDCDTD 283 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQI SI+ ++ + SRR ++SAWNV+ +DKM LPPCH QFYV + C L Sbjct: 284 YRGQGEDQILSIISEIQNNATSRRLVLSAWNVSDLDKMCLPPCHSFSQFYVRGDFVDCHL 343 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+ L ++A G + G + GDVH+Y H + A L R Sbjct: 344 YQRSADLALGVPFNIASYACLLSIIAEASGKKAGNLTMSFGDVHIYETHIDNAQKMLERL 403 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 P P++ + + L + DF L Y A+ Sbjct: 404 PHKTPKLKVKISDNTLFCLKKGDFELDGYSCCGAL 438 >gi|239995918|ref|ZP_04716442.1| thymidylate synthase [Alteromonas macleodii ATCC 27126] Length = 182 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 101/181 (55%), Positives = 128/181 (70%), Gaps = 13/181 (7%) Query: 97 QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID-------------KMAL 143 QWRSW DG +DQI+ +V+ ++ +P SRR IVS WN A++ K AL Sbjct: 2 QWRSWDRGDGTSVDQIAEVVEQIKNNPDSRRLIVSGWNPAVLPDTNYSPKENAAMGKQAL 61 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 PPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLTMM+A V + G+FIHTL Sbjct: 62 PPCHTLFQFYVLDGKLSCQLYQRSGDIFLGVPFNIASYALLTMMMAQVCDLEPGDFIHTL 121 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 GD HLY+NH EQ +LQLSR P P M INP + D+ F ++DFTL++Y+ H I A V+ Sbjct: 122 GDAHLYSNHLEQVELQLSREPFERPTMEINPEVKDIFGFSFDDFTLKNYQSHPHIKAPVA 181 Query: 264 V 264 + Sbjct: 182 I 182 >gi|32709479|gb|AAP86758.1| thymidylate synthase [Enterobacteria phage T6] gi|113952002|gb|ABI48939.1| Td [Enterobacteria phage T6] Length = 286 Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 125/291 (42%), Positives = 169/291 (58%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI +V ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L + A + G+ I + G+ H+Y NH EQ L R P Sbjct: 176 RSVDVFLGLPFNIASYAALVHIAAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235 Query: 226 TLPQMIIN-PNIVD----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264 L ++ + P+ D L F + +F L +Y H I K++V Sbjct: 236 DLCELQLKFPDEFDEWNTESQVFWLSQFAKPHNFVLNNYVSHPPIKGKMAV 286 >gi|167464449|ref|ZP_02329538.1| Thymidylate synthase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 230 Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 98/183 (53%), Positives = 128/183 (69%) Query: 82 EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 ++A + G+LG +YG QWR+W +G IDQ+ I+ +++ +P SRR IVSAWN I M Sbjct: 48 QFALEFGDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVSAWNPEDIPSM 107 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 LPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A G + GEFIH Sbjct: 108 VLPPCHTLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHECGIEAGEFIH 167 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 TLGD H+Y+NH +Q LQLSR P+ LP + INP + + D L Y+PH +I A Sbjct: 168 TLGDAHVYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEGYDPHPSIKAP 227 Query: 262 VSV 264 V+V Sbjct: 228 VAV 230 >gi|289618154|emb|CBI55370.1| unnamed protein product [Sordaria macrospora] Length = 353 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 128/326 (39%), Positives = 166/326 (50%), Gaps = 63/326 (19%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG------------------- 41 +QYLDL+R + G R DRTG GT S F ++F LSK Sbjct: 28 YQYLDLVRQIFDEGELREDRTGTGTYSIFAPTPLKFALSKPSPSASGASADPSSPSYSFE 87 Query: 42 --FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD------------KD 87 PLLTTK+V K+V+ ELLWF+ ++ + L GV IWD K+ Sbjct: 88 PILPLLTTKRVFTKAVLLELLWFISASTSSTTLSSQGVKIWDGNGSRAFLDMLGLSHRKE 147 Query: 88 GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 G+LGP+YG QWR + DY G +DQ+ I+ +LR +PY RR I+SAWN + Sbjct: 148 GDLGPVYGFQWRHFGAEYVDAETDYTGQGVDQLQRIIDTLRTNPYDRRLILSAWNPKDMS 207 Query: 140 KMALPPCHCLFQFYVD--------------------NGKLSCQLYQRSGDVFLGIPFNIA 179 +M LPPCH QFYV G L CQLYQRS D+ LG+PFNIA Sbjct: 208 QMVLPPCHMFAQFYVSYPGSRERTRKEGEPTKQEKPKGHLHCQLYQRSCDMGLGVPFNIA 267 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LLT MLA V G H +GD H+Y NH + QL R PR P + I Sbjct: 268 SYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQLEREPREFPTLEIKREKRGS 327 Query: 240 L-SFRYEDFTLRSYEPHAAILAKVSV 264 + ++ EDF ++ YEPH I ++SV Sbjct: 328 IDGWKAEDFVVKGYEPHKTIAMEMSV 353 >gi|32709469|gb|AAP86753.1| thymidylate synthase [Enterobacteria phage RB23] Length = 286 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 123/291 (42%), Positives = 170/291 (58%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L++ +++ G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+ Sbjct: 1 MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + KD GELGPIYG QWR D+ Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQI ++ ++ P RR IVSAWN A + +MALPPCH +QF V NG L Q YQ Sbjct: 118 G--VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKQMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKICNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235 Query: 226 TLPQMIIN-PNIVD----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264 L ++ + P+ D L F + +F L Y H I K++V Sbjct: 236 DLCELQLKFPDEFDEWDTESQVFWLSQFAKPHNFVLNDYVSHPPIKGKMAV 286 >gi|166240844|ref|ZP_02240716.1| Thymidylate synthase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 182 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 97/177 (54%), Positives = 124/177 (70%) Query: 88 GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCH 147 G+LG +YG QWR+W +G IDQ+ I+ +++ +P SRR IVSAWN I M LPPCH Sbjct: 6 GDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVSAWNPEDIPSMVLPPCH 65 Query: 148 CLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVH 207 LFQFYV G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A G + GEFIHTLGD H Sbjct: 66 TLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHECGIEAGEFIHTLGDAH 125 Query: 208 LYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Y+NH +Q LQLSR P+ LP + INP + + D L Y+PH +I A V+V Sbjct: 126 VYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEGYDPHPSIKAPVAV 182 >gi|311993503|ref|YP_004010368.1| Td dTMP synthase [Acinetobacter phage Acj9] gi|295917460|gb|ADG60131.1| Td dTMP synthase [Acinetobacter phage Acj9] Length = 320 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 173/320 (54%), Gaps = 56/320 (17%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M QY DL++ ++ G +RTG GT S FG Q++FDL+ FP +TTKK+ WK+VV EL Sbjct: 1 MQQYHDLMQKILDEGDLIETERTGTGTLSIFGEQLKFDLADYFPAITTKKLAWKAVVSEL 60 Query: 60 LWFLRGDSNVSYLHR--HG---------VSIWDEWADK--------DGELGPIYGVQWRS 100 LWFL+G SN++ L HG +IWD +K DGE+G IYG QWRS Sbjct: 61 LWFLKGSSNLNELRAILHGEENRFNEEKKTIWDGNYNKQAKDLGYTDGEMGDIYGAQWRS 120 Query: 101 -----------------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI----- 138 + DY+ +DQ+ ++ + +P SRR IV AWN ++ Sbjct: 121 FGRKTLQIEDENCKVVCYDDYEVKGVDQVKLVLDEAKRNPSSRRLIVQAWNPDVVWNSKK 180 Query: 139 -----------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 ++ ALPPCH ++Q + NG+L QRS D+FLG+ FNIASY+LL + Sbjct: 181 TKVGHTMIIGGNEAALPPCHLMYQLRIVNGRLDMSWSQRSNDIFLGVCFNIASYALLQHI 240 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR---Y 244 A ++G + G+ LGD H+Y NH +Q LQLSR + PQ+ INP + L F Sbjct: 241 FARILGLKVGKLTGFLGDCHIYLNHVDQVKLQLSRDHLSKPQLEINPALKTLEDFENATV 300 Query: 245 EDFTLRSYEPHAAILAKVSV 264 +DF L H AI A ++V Sbjct: 301 DDFKLVGLITHGAIKADMAV 320 >gi|255019178|ref|ZP_05291304.1| thymidylate synthase [Listeria monocytogenes FSL F2-515] Length = 179 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 97/172 (56%), Positives = 123/172 (71%), Gaps = 1/172 (0%) Query: 79 IWDE-WADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 I DE +A+K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IVSAWN Sbjct: 8 IEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIVSAWNPED 67 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A +G G Sbjct: 68 IPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAREVGLDVG 127 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 EFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 128 EFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISL 179 >gi|302309826|ref|XP_448463.2| hypothetical protein [Candida glabrata CBS 138] gi|196049169|emb|CAG61424.2| unnamed protein product [Candida glabrata] Length = 256 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 117/276 (42%), Positives = 157/276 (56%), Gaps = 43/276 (15%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL +IK G R DRTG G KK+ + V +W Sbjct: 10 QYLDLCERIIKEGEFRPDRTGTGCTD------------------AKKLSDQGVK---IW- 47 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSW--------PDYDGNVIDQIS 113 G+ + YL + G + D ++G+LGP+YG QWR + DY G +DQ+ Sbjct: 48 -EGNGSREYLDKMG------FVDRREGDLGPVYGFQWRHFGAEYKTCEDDYTGQGVDQLK 100 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---NGK--LSCQLYQRSG 168 ++ L+ +PY RR I+SAWN KMALPPCH QFYV+ +GK LSC LYQRS Sbjct: 101 EVIHKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFSQFYVNFPKDGKPQLSCLLYQRSC 160 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+ LG+PFNIASY+LLT M+A V + GEFIHTLGD H+Y +H + Q+SR+PR P Sbjct: 161 DMGLGVPFNIASYALLTKMIAHVCDMEPGEFIHTLGDAHVYKDHVDALKEQISRTPRDFP 220 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ IN + D+ F++EDF L Y+PH I +SV Sbjct: 221 KLRINRKVSDIDDFKFEDFVLEEYDPHPRIQMNMSV 256 >gi|26353640|dbj|BAC40450.1| unnamed protein product [Mus musculus] Length = 222 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 20/222 (9%) Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 1 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 60 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 61 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 120 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 121 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 180 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 181 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 222 >gi|85089414|ref|XP_957941.1| thymidylate synthase [Neurospora crassa OR74A] gi|28919227|gb|EAA28705.1| thymidylate synthase [Neurospora crassa OR74A] Length = 368 Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 127/337 (37%), Positives = 167/337 (49%), Gaps = 74/337 (21%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG------------------- 41 +QYLDL+R ++ G R DRTG GT S F ++F LS+ Sbjct: 32 YQYLDLVRQILDEGELREDRTGTGTYSIFAPTPLKFALSRPSSSSPSSGSSSDPSSPDYT 91 Query: 42 ----FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD------------ 85 PLLTTK+V K+V+ ELLWF+ ++ + L GV IWD Sbjct: 92 YTPILPLLTTKRVFTKAVLLELLWFISASTSSTTLSAQGVKIWDGNGSRAFLDMLGLSHR 151 Query: 86 KDGELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 K+G+LGP+YG QWR + DY G +DQ+ I+ +LR +PY RR I+SAWN Sbjct: 152 KEGDLGPVYGFQWRHFGAEYVDCETDYTGQGVDQLQRIIDTLRNNPYDRRLILSAWNPKD 211 Query: 138 IDKMALPPCHCLFQFYVD-----------------------------NGKLSCQLYQRSG 168 + +M LPPCH QFYV G L CQLYQRS Sbjct: 212 MSQMVLPPCHMFAQFYVSYPGSRTRGGATQTQNKEGELDTPPKEKKPRGHLHCQLYQRSC 271 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+ LG+PFNIASY+LLT MLA V G H +GD H+Y NH + QL R PR P Sbjct: 272 DMGLGVPFNIASYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQLEREPREFP 331 Query: 229 QMIINPNIVDLL-SFRYEDFTLRSYEPHAAILAKVSV 264 + I + ++ EDF ++ YEPH I ++SV Sbjct: 332 TLEIQREKGGSIDGWKAEDFVIKGYEPHKTIAMEMSV 368 >gi|26353070|dbj|BAC40165.1| unnamed protein product [Mus musculus] Length = 222 Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 20/222 (9%) Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 1 IKGYTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 60 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 61 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 120 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 121 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 180 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 181 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 222 >gi|171678407|ref|XP_001904153.1| hypothetical protein [Podospora anserina S mat+] gi|170937273|emb|CAP61930.1| unnamed protein product [Podospora anserina S mat+] Length = 303 Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 116/285 (40%), Positives = 154/285 (54%), Gaps = 41/285 (14%) Query: 21 RTGVGTRSTFG-YQMRFDLSKG-----FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74 RTG GT S F ++F LS PLLTTK+V ++++ ELLWF+ G ++ L Sbjct: 19 RTGTGTYSLFAPSPLKFSLSTPTGTPLLPLLTTKRVFTRAIILELLWFISGSTSSLPLSS 78 Query: 75 HGVSIWDEWADK------------DGELGPIYGVQWR--------SWPDYDGNVIDQISS 114 V IWD + +G+LGP+YG QWR S DY G +DQ++ Sbjct: 79 QNVKIWDGNGSRAFLDSLGLTHREEGDLGPVYGFQWRHFGAEYVDSKTDYTGQGVDQLAR 138 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--------------NGKLS 160 IVQ+L+ +PY RR I+SAWN + +M LPPCH QFYV G L Sbjct: 139 IVQTLKTNPYDRRLILSAWNPKDMSQMVLPPCHMFAQFYVSYPRSRKETEEGREVKGHLH 198 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT MLA V G H +GD H+Y NH + QL Sbjct: 199 CQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQL 258 Query: 221 SRSPRTLPQMIINPNIVDLL-SFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I + ++ EDF ++ Y PH I ++SV Sbjct: 259 EREPREFPELEIKREKGGSIDGWKLEDFEIKGYNPHKVISMEMSV 303 >gi|169835631|ref|ZP_02868819.1| Thymidylate synthase [candidate division TM7 single-cell isolate TM7a] Length = 205 Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 102/194 (52%), Positives = 130/194 (67%), Gaps = 14/194 (7%) Query: 81 DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +EW G+LGP+YGVQWR WPD G IDQI + + ++ +P SRR+IVSAWNVA ID Sbjct: 16 EEW----GDLGPVYGVQWRKWPDGKGGTIDQIQNAIDMIKNNPMSRRNIVSAWNVAEIDD 71 Query: 141 MA----LPPCHCLFQFYV---DNG---KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 +A LPPCH +FQF V +NG KL L QRS D+FLG+PFNIASY+LL M+A Sbjct: 72 IARAGGLPPCHTIFQFNVRPGENGEKDKLDLTLTQRSADIFLGVPFNIASYALLLSMIAQ 131 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 V G Q GEF+HTL H+YNNH Q D QLSR P LP++ +NP+I ++ F +D L Sbjct: 132 VTGKQPGEFVHTLNSAHIYNNHRVQVDEQLSRHPLPLPKLWLNPDIKNIDDFTIKDIRLE 191 Query: 251 SYEPHAAILAKVSV 264 YE H+ I A ++V Sbjct: 192 GYESHSPIKAPIAV 205 >gi|151945700|gb|EDN63941.1| thymidylate synthase [Saccharomyces cerevisiae YJM789] Length = 259 Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 116/280 (41%), Positives = 153/280 (54%), Gaps = 48/280 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + +I G R DRTG LL+ + V +W Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTDAN----------------LLSEQGVK--------IW 46 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW--------PDYDGNVIDQIS 113 G+ + YL + G K G+LGP+YG QWR + DY G IDQ+ Sbjct: 47 --DGNGSREYLDKMGFK-----DRKVGDLGPVYGFQWRHFGAKYKTCDDDYTGQGIDQLK 99 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGK--LSCQLY 164 ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV +GK LSC LY Sbjct: 100 QVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKEGEGSGKPRLSCLLY 159 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y +H + Q+SR+P Sbjct: 160 QRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDALKEQISRNP 219 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 220 RPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 259 >gi|15896255|ref|NP_349604.1| thymidylate synthase [Clostridium acetobutylicum ATCC 824] gi|25091479|sp|Q97EV3|TYSY_CLOAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|15026060|gb|AAK80944.1|AE007797_6 Thymidylate synthase [Clostridium acetobutylicum ATCC 824] gi|325510410|gb|ADZ22046.1| thymidylate synthase [Clostridium acetobutylicum EA 2018] Length = 263 Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 105/266 (39%), Positives = 155/266 (58%), Gaps = 11/266 (4%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +YLD++ ++++ G +RTG+ T M+FDLSK FP+LTTK V +K+ V ELLW Sbjct: 6 EKYLDIIENILENGYYDNNRTGIETYKLPHQIMQFDLSKEFPILTTKFVAFKTSVKELLW 65 Query: 62 FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 + SN V L V+IWDEW +DG +G YG Q + QI +++ +L+ Sbjct: 66 IYKDQSNDVRKLQNENVTIWDEWMLEDGTIGKAYGYQVAKFK--------QIDNLIDTLK 117 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR ++S WN+A + M+L PC + V NGKL+C L QRSGD+ LG+PFN+ Sbjct: 118 TDPQSRRMLISLWNIADLKDMSLTPCCYETLWDVQNGKLNCMLVQRSGDMPLGVPFNMCQ 177 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVD 238 Y++L ++A V G + G F H + + H+Y N E +QL R + P++ INPNI + Sbjct: 178 YAVLVHLIAQVTGLKPGLFTHVINNAHIYKNQIEGMKIQLKRRDKAYEAPKLWINPNIKN 237 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L Y+ H I +V+V Sbjct: 238 FYDFTADDIKLIDYKHHDKIKMEVAV 263 >gi|313892946|ref|ZP_07826523.1| thymidylate synthase [Veillonella sp. oral taxon 158 str. F0412] gi|313442299|gb|EFR60714.1| thymidylate synthase [Veillonella sp. oral taxon 158 str. F0412] Length = 263 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 105/265 (39%), Positives = 155/265 (58%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ ++++ G+ ++RTGV T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILEHGTYGQNRTGVATYKLPHQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ +++++++ Sbjct: 67 WQMQSNDVRKLQEMNVRVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ +D MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVADGHLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239 + L M+A V G + G+F H + + H+Y NH E QL+R + L P++I+NP + D Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHVYENHVEALREQLARRDQALPAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V+V Sbjct: 239 YDFTPEDVTLDGYEHLGKLSMTVAV 263 >gi|187903049|ref|YP_001883340.1| thymidylate synthase [Musca domestica salivary gland hypertrophy virus] gi|187384698|gb|ACD03471.1| thymidylate synthase [Musca domestica salivary gland hypertrophy virus] Length = 294 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 113/281 (40%), Positives = 167/281 (59%), Gaps = 28/281 (9%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL L+R V++ G+ + +RTGV T+ FG Q+R+DL +LTTKKV ++S + ELLWF Sbjct: 10 YLTLVRRVLRDGTLKSNRTGVDTKYIFGDQLRYDLRDNRIAMLTTKKVFFRSALEELLWF 69 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------P 102 LRGD+N + L GV+IW E+ D + LGPIYG QWR + Sbjct: 70 LRGDTNQANLAAKGVNIWRGNSTREYLDSRKLPYPEHESLGPIYGFQWRHFGARYIDCHT 129 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLS 160 DY G +DQ++ + ++ +P SRR I++AWN +DKM LPPCH QF V+ G+LS Sbjct: 130 DYTGQGVDQLAQCMHQIQYEPSSRRMIMTAWNPNDLDKMVLPPCHMSIQFSVNEKLGELS 189 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 + QRS D+ LG+PFN+ SYSL+ +LA G + GE + + GD+H+Y H + A Q+ Sbjct: 190 GHMTQRSADLMLGVPFNLVSYSLMLHILAHKFGLKAGELVTSYGDLHIYVPHIKNAMRQV 249 Query: 221 SRSPRTLPQMIIN---PNIVDLLSFRYEDFTLRSYEPHAAI 258 SR P PQ+ + V+ L+ +DF +++Y H+ + Sbjct: 250 SRLPYASPQIELKFGRDKRVEELTV--DDFAVKNYRHHSQL 288 >gi|1420229|emb|CAA99267.1| CDC21 [Saccharomyces cerevisiae] Length = 259 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 115/280 (41%), Positives = 153/280 (54%), Gaps = 48/280 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + +I G R DRTG LL+ + V +W Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTDAN----------------LLSEQGVK--------IW 46 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW--------PDYDGNVIDQIS 113 G+ + YL + G K G+LGP+YG QWR + DY G IDQ+ Sbjct: 47 --DGNGSREYLDKMGFK-----DRKVGDLGPVYGFQWRHFGAKYKTCDDDYTGQGIDQLK 99 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGK--LSCQLY 164 ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV +GK LSC LY Sbjct: 100 QVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKEGEGSGKPRLSCLLY 159 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y +H + Q++R+P Sbjct: 160 QRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDALKEQITRNP 219 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 220 RPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 259 >gi|238018729|ref|ZP_04599155.1| hypothetical protein VEIDISOL_00573 [Veillonella dispar ATCC 17748] gi|237865200|gb|EEP66490.1| hypothetical protein VEIDISOL_00573 [Veillonella dispar ATCC 17748] Length = 263 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ ++++ G+ ++RTGV T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILEHGTYGQNRTGVATYKLPHQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ ++++++ Sbjct: 67 WQMQSNDVRKLQEMNVRVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ +D MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVADGHLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239 + L M+A V G + G+F H + + H+Y NH E QL+R + L P++I+NP + D Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHVYENHVEALREQLARRDQALSAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V+V Sbjct: 239 YDFTPEDVTLDGYEHLGKLSMTVAV 263 >gi|255025022|ref|ZP_05297008.1| thymidylate synthase [Listeria monocytogenes FSL J1-208] Length = 159 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 89/159 (55%), Positives = 113/159 (71%) Query: 91 GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150 G IYG QWR W G IDQ++ +++ ++ +P SRR IVSAWN I MALPPCH LF Sbjct: 1 GNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLF 60 Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 QFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A +G GEFIHT+GD HLYN Sbjct: 61 QFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAREVGLDVGEFIHTMGDAHLYN 120 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 NH EQ QLSR+P LP+++++ + F D +L Sbjct: 121 NHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISL 159 >gi|77461594|ref|YP_351101.1| thymidylate synthase [Pseudomonas fluorescens Pf0-1] gi|77385597|gb|ABA77110.1| thymidylate synthase [Pseudomonas fluorescens Pf0-1] Length = 323 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 114/323 (35%), Positives = 167/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HVI G+ + +RTGV T S G +RFDL +GFP +TT+K+ +KS + E+ Sbjct: 1 MKQYLDLVSHVINNGTKQANRTGVNTISFPGAMLRFDLQEGFPAITTRKMAFKSAIGEMC 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGEDDLGEIYGVQWRKWPAYKQIP 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ V ++ DP SRR + WN Sbjct: 121 LSNTAAIEQTLSNGYKQIAQGEEDGQAYVVLYKAIDQVRQCVDTIIKDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + QL R P +P++ I+ P ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPFAMPKLKISDRVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L YE HA + A ++V Sbjct: 301 VEPSDFSLEGYEHHAPMTAPMAV 323 >gi|219123048|ref|XP_002181844.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406445|gb|EEC46384.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 217 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 105/212 (49%), Positives = 132/212 (62%), Gaps = 23/212 (10%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL RH++ G R DRTG GT S FG QMRF L G PLLTTK+V W+ V ELLW Sbjct: 6 QYLDLCRHILDHGVHRGDRTGTGTLSQFGTQMRFSLRDGTLPLLTTKRVFWRGVAEELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101 F+ G++N + L + IWD D G+LGP+YG QWR + Sbjct: 66 FVAGNTNANDLAAKDIRIWDGNGSPDFLDSWGLGHREVGDLGPVYGFQWRHFGATYGTIH 125 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--L 159 DY G +DQ++ + ++ +P RR I+SAWN A ++ MALPPCH QFYVD K L Sbjct: 126 DDYTGKGVDQLAECIDKIKNNPEDRRIILSAWNPADLELMALPPCHMFRQFYVDTEKNEL 185 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 SCQ+YQRS D+ LG+PFNIASY+LLT M+A V Sbjct: 186 SCQMYQRSADMGLGVPFNIASYALLTHMIAHV 217 >gi|70733180|ref|YP_262953.1| thymidylate synthase [Pseudomonas fluorescens Pf-5] gi|68347479|gb|AAY95085.1| thymidylate synthase [Pseudomonas fluorescens Pf-5] Length = 323 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 112/323 (34%), Positives = 166/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HVI G+ + +RTGV T S G +R+DL +GFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVAHVINNGTKQANRTGVNTISFPGAMLRYDLKEGFPAITTRKMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDY---- 104 FLRG +N + G +WD+ A++ D +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGDDDLGEIYGVQWRKWPAYKQIK 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ V ++ DP SRR + WN Sbjct: 121 TSNQAAIDLALSQGYRQIAAGEEDGQGYVVLYKAIDQVRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + QL R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPFPMPKLVISERVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L YE HA + A ++V Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323 >gi|302876686|ref|YP_003845319.1| thymidylate synthase [Clostridium cellulovorans 743B] gi|307687361|ref|ZP_07629807.1| thymidylate synthase [Clostridium cellulovorans 743B] gi|302579543|gb|ADL53555.1| thymidylate synthase [Clostridium cellulovorans 743B] Length = 263 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 104/265 (39%), Positives = 153/265 (57%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+++ ++ G ++RTGV T +F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 QYLDIVQDILDNGYYDQNRTGVATYKLPHKVFQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L VSIWDEW +DG +G YG Q + QI ++++L+ Sbjct: 67 YKDQSNDVRKLQEQNVSIWDEWMLEDGTIGKAYGYQVAKYK--------QIDKLIEALKD 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ WN+ + MAL PC L + V +G+L+C L QRSGD+ LG+PFN+A Y Sbjct: 119 NPQDRRMMINLWNIDDLKDMALQPCCFLTLWDVTDGRLNCMLVQRSGDIPLGVPFNMAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVDL 239 ++L ++A V G + G F H + + H+Y N E LQL+R P++ INP I + Sbjct: 179 AVLVHLIAQVTGLKPGLFTHVINNAHIYENQVEGMKLQLTRREEAYDAPKIWINPEIKNF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F+ ED L Y+ H I +VSV Sbjct: 239 YDFKPEDIKLEGYQHHPVIKMEVSV 263 >gi|154272075|ref|XP_001536890.1| thymidylate synthase [Ajellomyces capsulatus NAm1] gi|150408877|gb|EDN04333.1| thymidylate synthase [Ajellomyces capsulatus NAm1] Length = 315 Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 113/262 (43%), Positives = 142/262 (54%), Gaps = 57/262 (21%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46 HQYL L+R +++ G R DRTG GT S F Q+RF LSK PLLT Sbjct: 47 HQYLRLIRSILETGEHRPDRTGTGTCSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+Y Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166 Query: 95 GVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 G QWR + DY G +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226 Query: 147 HCLFQFYVD----------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 H QFYV G LSCQLYQRS D+ LG+PFNIASY+LL Sbjct: 227 HMFAQFYVSFPAGDRDDGGEENEDQNEKEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286 Query: 185 TMMLASVIGFQYGEFIHTLGDV 206 T MLA G IHT+GD Sbjct: 287 THMLAHAADLHPGTLIHTMGDA 308 >gi|330806918|ref|YP_004351380.1| Thymidylate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375026|gb|AEA66376.1| Thymidylate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 323 Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 109/323 (33%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HVIK G+ + +RTGV T S G +R+DL GFP +TT+K+ +KS + E+ Sbjct: 1 MKQYLDLVAHVIKNGTKQANRTGVNTISFPGAMLRYDLKDGFPAITTRKMAFKSAIGEMC 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYDG-- 106 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGEDDLGEIYGVQWRKWPAYKQIP 120 Query: 107 --------------------------------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ V ++ DP SRR + WN Sbjct: 121 LSNPAAIEQTLAQGYRQIAEGEENGQAYVVLYKAIDQVRQCVDTIIKDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + QL+R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLTREPFPMPKLVISERVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y+ HA + A ++V Sbjct: 301 VEPSDFSLEGYQHHAPMTAPMAV 323 >gi|170719511|ref|YP_001747199.1| thymidylate synthase [Pseudomonas putida W619] gi|169757514|gb|ACA70830.1| Thymidylate synthase [Pseudomonas putida W619] Length = 323 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 113/323 (34%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI+ G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIENGTLQENRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLRG N G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNPAAIEMAEKAGFRRIAQDEEDGQAFVVLYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V ++S LY RS D+ LG PFN+ + L + + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + QL R P P+++I+ P + + E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L YE HA + A ++V Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323 >gi|104784144|ref|YP_610642.1| thymidylate synthase [Pseudomonas entomophila L48] gi|95113131|emb|CAK17859.1| thymidylate synthase (TS) (TSase) [Pseudomonas entomophila L48] Length = 323 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/323 (34%), Positives = 166/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIDNGTLQENRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLRG N G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNPAAIEMAEKAGFRRIAQDEEDGQAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L + + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245 G+ F + +GD H+Y NH + + Q+ R P P+++I+ + + +YE Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMKREPLAAPKLVISDRVPAFAKTGKYEPEWLEK 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L YE HA + A ++V Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323 >gi|304415491|ref|ZP_07396130.1| thymidylate synthase [Candidatus Regiella insecticola LSR1] gi|304282650|gb|EFL91174.1| thymidylate synthase [Candidatus Regiella insecticola LSR1] Length = 155 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 83/150 (55%), Positives = 115/150 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++ V++ G+ ++DRTG GT S FG+QMRF+L GFPL+TTK+ + K+++HELL Sbjct: 1 MQQYLALMKKVLEEGTTKKDRTGTGTLSIFGHQMRFNLQNGFPLVTTKRCYTKAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + V+IW+EW D+ G+LGP+YG QWRSW DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIAYLKENDVTIWNEWVDEQGDLGPVYGKQWRSWGTADGRHIDQLDLLVNEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLF 150 +P SRR +VSAWNV +DKMAL PCH F Sbjct: 121 KNPDSRRLVVSAWNVGELDKMALAPCHAFF 150 >gi|269798443|ref|YP_003312343.1| thymidylate synthase [Veillonella parvula DSM 2008] gi|269095072|gb|ACZ25063.1| thymidylate synthase [Veillonella parvula DSM 2008] Length = 263 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 103/265 (38%), Positives = 152/265 (57%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ ++++++ Sbjct: 67 WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ +D MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239 + L M+A V G + G+F H + + H+Y NH + QL+R + L P++I+NP + D Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLARRNQALPAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V+V Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263 >gi|237802256|ref|ZP_04590717.1| thymidylate synthase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025113|gb|EGI05169.1| thymidylate synthase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 323 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG SN + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + Q++R P +P+++I+ P ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323 >gi|312897560|ref|ZP_07756980.1| thymidylate synthase [Megasphaera micronuciformis F0359] gi|310621412|gb|EFQ04952.1| thymidylate synthase [Megasphaera micronuciformis F0359] Length = 267 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 102/266 (38%), Positives = 152/266 (57%), Gaps = 11/266 (4%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+++ ++++ G ++RTG+ T M+FDL K FP+LTTK V +K+ V ELLW Sbjct: 10 EQYLNIVENILEHGYFDQNRTGIRTYKLPHQMMQFDLEKEFPILTTKFVAFKTAVKELLW 69 Query: 62 FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 + SN V L + +WDEW +DG +G YG Q R + Q+ +++ LR Sbjct: 70 IWQLQSNDVRELQKMNCHVWDEWMREDGTIGKAYGYQIRKY--------KQVDTLLDQLR 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP +RR IVS WN+ + MAL PC + V +G+L+C L QRSGD+ LGIPFN+ Sbjct: 122 TDPQNRRMIVSLWNIEDLPDMALQPCAYQTLWDVSDGRLNCMLVQRSGDMGLGIPFNMTQ 181 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVD 238 Y++L ++A +G + G F H + + H+Y NH E QL+R L PQ++I+ I D Sbjct: 182 YAVLVHLIARSVGLRPGLFTHVINNAHIYENHVEALKTQLARRREALPAPQLVIDEGITD 241 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 FR E+ L Y + +V+V Sbjct: 242 FYEFRPENIRLEGYTHKGKLPMEVAV 267 >gi|330987229|gb|EGH85332.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 323 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEGGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + Q++R P +P+++I+ P ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323 >gi|258646536|ref|ZP_05734005.1| thymidylate synthase [Dialister invisus DSM 15470] gi|260403948|gb|EEW97495.1| thymidylate synthase [Dialister invisus DSM 15470] Length = 264 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 104/266 (39%), Positives = 156/266 (58%), Gaps = 12/266 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++++++ GS +RTG+ M+FDL K FP+LTTK V +K+ V E+LW Sbjct: 7 QYLGIIKNILDAGSLGDNRTGMPAYKLPHQIMQFDLEKEFPILTTKFVAFKTSVKEILWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L + +WDEW +DG +G YG Q + Q+ +++++L+ Sbjct: 67 WQKQSNDVRLLQQWNCHVWDEWMQEDGTIGKAYGYQLGKY--------HQVDTLLETLKK 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR +V WNV + MAL PC L + V D+G+L+C L QRSGD+ LG+PFN+A Sbjct: 119 DPQSRRMVVDLWNVKDLPDMALYPCAFLTMWDVSDDGRLNCMLVQRSGDMGLGVPFNMAQ 178 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVD 238 Y+ L M+A V G + G F H + + H+Y NH + QL+R P+ P + +NP++ D Sbjct: 179 YAALVHMIAQVSGLRVGLFTHVINNAHVYRNHVDAMKTQLARLPKAYDAPVLKLNPDVHD 238 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 F+ ED L +Y+ H I +VSV Sbjct: 239 FYDFKPEDIVLENYKHHEKIAMEVSV 264 >gi|71735199|ref|YP_276964.1| thymidylate synthase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483848|ref|ZP_05637889.1| thymidylate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624869|ref|ZP_06457823.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650714|ref|ZP_06482057.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str. 2250] gi|289672056|ref|ZP_06492946.1| thymidylate synthase [Pseudomonas syringae pv. syringae FF5] gi|298489271|ref|ZP_07007288.1| Thymidylate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71555752|gb|AAZ34963.1| thymidylate synthase [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156235|gb|EFH97338.1| Thymidylate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320326279|gb|EFW82332.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. B076] gi|320331721|gb|EFW87659.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330869197|gb|EGH03906.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330872473|gb|EGH06622.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330940592|gb|EGH43640.1| thymidylate synthase [Pseudomonas syringae pv. pisi str. 1704B] gi|330982261|gb|EGH80364.1| thymidylate synthase [Pseudomonas syringae pv. aptata str. DSM 50252] gi|331012059|gb|EGH92115.1| thymidylate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 323 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + Q++R P +P+++I+ P ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323 >gi|66048064|ref|YP_237905.1| thymidylate synthase [Pseudomonas syringae pv. syringae B728a] gi|63258771|gb|AAY39867.1| Thymidylate synthase [Pseudomonas syringae pv. syringae B728a] Length = 323 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + Q++R P +P+++I+ P ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLGL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323 >gi|313501116|gb|ADR62482.1| ThyA [Pseudomonas putida BIRD-1] Length = 323 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 113/323 (34%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLRG N G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L + + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + QL R P P+++I+ P+ + + E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPSFAETGKYEPEWLEK 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF L YE HA + A ++V Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323 >gi|167036181|ref|YP_001671412.1| thymidylate synthase [Pseudomonas putida GB-1] gi|166862669|gb|ABZ01077.1| Thymidylate synthase [Pseudomonas putida GB-1] Length = 323 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 113/323 (34%), Positives = 164/323 (50%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI+ G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIENGTMQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLRG N G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNSAAIEMAEKAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L + + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + QL R P P+++I+ P + + E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLHEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF L YE HA + A ++V Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323 >gi|330954749|gb|EGH55009.1| thymidylate synthase [Pseudomonas syringae Cit 7] Length = 323 Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + Q++R P +P+++I+ P ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMNREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323 >gi|322368138|ref|ZP_08042707.1| thymidylate synthase [Haladaptatus paucihalophilus DX253] gi|320552154|gb|EFW93799.1| thymidylate synthase [Haladaptatus paucihalophilus DX253] Length = 330 Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 118/332 (35%), Positives = 165/332 (49%), Gaps = 72/332 (21%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYL L+ V++ G+ + +RTGV T STF DL +G+PLLTTKK+ W S++H Sbjct: 1 MKQYLGLVEDVLRDGTYKPNRTGVDTISTFSQHYEVDLREGYPLLTTKKMDGFRWDSMLH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR------------SWPDYD 105 ELLW+L G+ ++ L R IW+EWAD+DG L YG WR SWP+ D Sbjct: 61 ELLWYLSGEEHIRNL-REKTGIWNEWADEDGTLDTAYGRFWRRFPVPEEGLPGESWPEAD 119 Query: 106 ------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159 DQI ++ L +P SRR +VSAW+ A LPPCH F V L Sbjct: 120 HRWMNEDGTFDQIQYLIDGLDENPNSRRFVVSAWHPANAAVSTLPPCHYTFVVNVQGDTL 179 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-- 217 + L QRSGDV LGIPFN+A+Y+LL +LA GF+ G+F HT+ D H+Y ++ + Sbjct: 180 NLHLTQRSGDVALGIPFNVAAYALLATVLARQTGFEVGKFAHTIVDAHVYCGEGDRGEWY 239 Query: 218 ----------------------------------------------LQLSRSPRTLPQMI 231 QLSR+P++ P++ Sbjct: 240 RDNLEDLQTRLADVTQKSEYEEVREWLESEAPEEETEAMDHVPGLLTQLSRTPKSRPEIE 299 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 + + +D L+ Y+D LR Y+ H I V+ Sbjct: 300 VAADSIDELT--YDDIVLREYDAHPGIKFSVA 329 >gi|302188010|ref|ZP_07264683.1| thymidylate synthase [Pseudomonas syringae pv. syringae 642] Length = 323 Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 108/323 (33%), Positives = 168/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISERVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y+ H A+ A ++V Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323 >gi|28872394|ref|NP_795013.1| thymidylate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|62901368|sp|Q87UL4|TYSY_PSESM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|28855649|gb|AAO58708.1| thymidylate synthase [Pseudomonas syringae pv. tomato str. DC3000] Length = 323 Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 110/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG SN + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI + ++ DP SRR + WN Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + Q++R P +P+++I+ P ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y+ H A+ A ++V Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323 >gi|330961919|gb|EGH62179.1| thymidylate synthase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 322 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/322 (34%), Positives = 170/322 (52%), Gaps = 59/322 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG SN + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + Q++R P ++P+++I+ P ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYSMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVS 263 DF+L Y+ H A+ A ++ Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMA 322 >gi|296330980|ref|ZP_06873455.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674499|ref|YP_003866171.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23] gi|317412153|sp|E0TVT6|TYSY1_BACPZ RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1; AltName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|296151985|gb|EFG92859.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412743|gb|ADM37862.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23] Length = 279 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 100/247 (40%), Positives = 146/247 (59%), Gaps = 3/247 (1%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVS 78 D T T S QMRFD S+ P+LTTKKV WK+ + ELLW + SN V+ L++ GV Sbjct: 34 DGTPAHTLSVISKQMRFDNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVH 92 Query: 79 IWDEWADKDGELGPIYGVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWD+W +DG +G YG Q + + +G +DQ+ ++ L+ +P SRRHI WN Sbjct: 93 IWDQWKQEDGTIGHAYGFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDE 152 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 +D MAL PC Q+YV GKL ++ RS D+ LG PFN+ Y++L M+A V G++ G Sbjct: 153 LDSMALTPCVYETQWYVKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELG 212 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E+I +GD H+Y H + +Q+ R P++ INP + D F +DF L +Y+ Sbjct: 213 EYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLFNYKHGDK 272 Query: 258 ILAKVSV 264 +L +V+V Sbjct: 273 LLFEVAV 279 >gi|26991817|ref|NP_747242.1| thymidylate synthase [Pseudomonas putida KT2440] gi|62901369|sp|Q88CN9|TYSY_PSEPK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|24986931|gb|AAN70706.1|AE016714_4 thymidylate synthase [Pseudomonas putida KT2440] Length = 323 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 113/323 (34%), Positives = 164/323 (50%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLRG N G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L + + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + QL R P P+++I+ P + + E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF L YE HA + A ++V Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323 >gi|136605|sp|P07606|TYSY_BPPHT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|215473|gb|AAA32353.1| thymidylate synthetase (EC 2.1.1.45) [Bacillus phage phi3T] gi|224477|prf||1106183A thymidylate synthetase Length = 279 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/274 (38%), Positives = 156/274 (56%), Gaps = 13/274 (4%) Query: 3 QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 QY +++ +I G SD D T T S QMRFD S+ P+LTTKKV W Sbjct: 7 QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMSKQMRFDNSE-VPILTTKKVAW 65 Query: 53 KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110 K+ + ELLW + SN V+ L++ GV IWD+W +DG +G YG Q + +G +D Sbjct: 66 KTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVD 125 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 Q+ ++ L+ +P SRRHI WN +D MAL PC Q+YV GKL ++ RS D+ Sbjct: 126 QVDYLLHQLKNNPSSRRHITMLWNPDDLDAMALTPCVYETQWYVKQGKLHLEVRARSNDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P++ Sbjct: 186 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPEL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP + D +F +DF L +Y+ +L +V+V Sbjct: 246 WINPEVKDFYNFTVDDFKLINYKHGDKLLFEVAV 279 >gi|213971428|ref|ZP_03399541.1| thymidylate synthase [Pseudomonas syringae pv. tomato T1] gi|301382144|ref|ZP_07230562.1| thymidylate synthase [Pseudomonas syringae pv. tomato Max13] gi|302060081|ref|ZP_07251622.1| thymidylate synthase [Pseudomonas syringae pv. tomato K40] gi|302132390|ref|ZP_07258380.1| thymidylate synthase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923789|gb|EEB57371.1| thymidylate synthase [Pseudomonas syringae pv. tomato T1] Length = 323 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 109/323 (33%), Positives = 169/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG SN + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI + ++ DP SRR + WN Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + L Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFARTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y+ H A+ A ++V Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323 >gi|29337127|sp|Q9ANR7|TYSY_BACMO RecName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|12958589|gb|AAK09364.1|AF321518_1 thymidylate synthase [Bacillus mojavensis] Length = 279 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/274 (38%), Positives = 156/274 (56%), Gaps = 13/274 (4%) Query: 3 QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 QY +++ +IK G SD D T T S QMRFD S+ P+LTTKKV W Sbjct: 7 QYNSIIKEIIKNGISDEEFDVRTKWESDGTPAHTLSIITKQMRFDNSE-VPILTTKKVAW 65 Query: 53 KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110 K+ + ELLW + SN V+ L++ GV IWD+W +DG +G YG Q + + +G +D Sbjct: 66 KTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGSIGHAYGFQLAKKNRNLNGEKVD 125 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 Q+ ++ L+ +P SRRHI WN +D MAL PC Q+YV GKL ++ RS D+ Sbjct: 126 QVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQWYVKQGKLHLEVRARSNDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P++ Sbjct: 186 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPKL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP + D F +DF L +Y+ + +V+V Sbjct: 246 WINPEVKDFYDFTIDDFKLINYKHGDRLSFEVAV 279 >gi|294794647|ref|ZP_06759783.1| thymidylate synthase [Veillonella sp. 3_1_44] gi|294454977|gb|EFG23350.1| thymidylate synthase [Veillonella sp. 3_1_44] Length = 263 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 101/265 (38%), Positives = 151/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ ++++++ Sbjct: 67 WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ ++ MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239 + L M+ V G + G+F H + + H+Y NH + QL+R + L P++I+NP + D Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARREQALPAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V+V Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263 >gi|330874141|gb|EGH08290.1| thymidylate synthase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 323 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 110/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAQFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQPFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + Q++R P +P+++I+ P ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y+ H A+ A ++V Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323 >gi|330972999|gb|EGH73065.1| thymidylate synthase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 323 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 110/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245 G+ F + +GD H+Y NH + + Q++R P +P+++I+ P ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y+ H A+ A ++V Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323 >gi|282849967|ref|ZP_06259350.1| thymidylate synthase [Veillonella parvula ATCC 17745] gi|282580404|gb|EFB85804.1| thymidylate synthase [Veillonella parvula ATCC 17745] Length = 263 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 101/265 (38%), Positives = 151/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ ++++++ Sbjct: 67 WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ ++ MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239 + L M+ V G + G+F H + + H+Y NH + QL+R + L P++I+NP + D Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARRDQALPAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V+V Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263 >gi|294792888|ref|ZP_06758035.1| thymidylate synthase [Veillonella sp. 6_1_27] gi|294456787|gb|EFG25150.1| thymidylate synthase [Veillonella sp. 6_1_27] Length = 263 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ ++++++ Sbjct: 67 WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ ++ MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239 + L M+ V G + G+F H + + H+Y NH + QL+R + L P++I+NP + D Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARREQALPAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V++ Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAI 263 >gi|221117830|ref|XP_002168778.1| PREDICTED: similar to thymidylate synthase, partial [Hydra magnipapillata] Length = 197 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 103/241 (42%), Positives = 132/241 (54%), Gaps = 44/241 (18%) Query: 24 VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83 GT S FG QMRF+L + FPLLTTK+V WK VV ELLWF+ G ++ + L + GV IW+ Sbjct: 1 TGTLSIFGGQMRFNLRESFPLLTTKRVFWKGVVEELLWFISGSTDGNILAQKGVQIWNS- 59 Query: 84 ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 R + N+ L MAL Sbjct: 60 ----------------------------------------NGTREFLDKCNIPL---MAL 76 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 PPCH QFYV NG+LSCQ+YQRS D+ LGIPFNIASYSLLT ++A V + G+FIHTL Sbjct: 77 PPCHSFCQFYVANGELSCQMYQRSCDMGLGIPFNIASYSLLTYIIAHVCNLKPGDFIHTL 136 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 GD H+YNNH Q+ RSPR P++ I + ++ F+ +DF L Y PH I ++ Sbjct: 137 GDAHVYNNHVSALKEQIGRSPRPFPKLNIKRKVENIDDFKSDDFELIGYNPHQKIKMAMA 196 Query: 264 V 264 V Sbjct: 197 V 197 >gi|328912174|gb|AEB63770.1| Thymidylate synthase 1 [Bacillus amyloliquefaciens LL3] Length = 279 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 99/247 (40%), Positives = 146/247 (59%), Gaps = 3/247 (1%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVS 78 D T T S QMRFD S+ P+LTTKKV WK+ + ELLW + SN V+ L++ GV Sbjct: 34 DGTPAHTLSVISKQMRFDNSE-IPILTTKKVAWKTAIKELLWIWQCKSNDVNELNKMGVH 92 Query: 79 IWDEWADKDGELGPIYGVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWD+W +DG +G YG Q + +G +DQ+ ++ L+ +P SRRHI + WN Sbjct: 93 IWDQWKQEDGTIGKAYGYQLGKKNRMLNGEKVDQVDYLIHQLKNNPSSRRHITTLWNPDE 152 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 +D MAL PC Q+ V GKL +++ RS D+ LG PFN+ Y++L M+A V G++ G Sbjct: 153 LDSMALTPCVYGTQWLVKGGKLHLEVFCRSNDLALGNPFNVFQYNVLQRMIAQVTGYELG 212 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E+I +GD H+Y H + +Q+ R P++ INPN+ D F +DF L +Y+ Sbjct: 213 EYIFNIGDCHVYTRHIDNLKIQMDREQYEAPELWINPNVKDFYDFTIDDFKLINYKHGDK 272 Query: 258 ILAKVSV 264 + +V+V Sbjct: 273 LYFEVAV 279 >gi|326536377|ref|YP_004300818.1| Td thymidylate synthase [Acinetobacter phage 133] gi|299483458|gb|ADJ19552.1| Td thymidylate synthase [Acinetobacter phage 133] Length = 315 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 120/315 (38%), Positives = 166/315 (52%), Gaps = 51/315 (16%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M YLDL+R+V+ G D D RTGVGT + FG Q++ DL KGFP +TTK++ +KSV E+ Sbjct: 1 MKSYLDLMRNVLDNGEDVDDERTGVGTIALFGEQLKIDLRKGFPAVTTKRLAFKSVTAEM 60 Query: 60 LWFLRGDSNVSYLH--RHGVS---------IWD----EWADKD-----GELGPIYGVQWR 99 LWFLRG +++ L HG S IWD + A+K+ G +GP+YG WR Sbjct: 61 LWFLRGSNDLFELRAITHGESARYDADKKTIWDANYYQQAEKELGYTAGYMGPVYGNVWR 120 Query: 100 -----------------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI---- 138 S+ +Y+ DQI +++ +P SRR + AW+ + Sbjct: 121 EFGQGTIRIERGDTKVESYDEYEVTGFDQIKAVLNEAIKNPGSRRLLTLAWDPKSVWGHD 180 Query: 139 ------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 DK LPPCH FQ ++NG + RS DVFLG PF+IASY+ L + ++ Sbjct: 181 DKYVKQDKPTLPPCHYGFQININNGHIDLLFLMRSVDVFLGKPFDIASYAELCHVFGRIL 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR---YEDFTL 249 G I G+VH+Y NH +Q QLSR P+ LP + INP + L F +DF L Sbjct: 241 GKTPRYLIGQFGNVHIYKNHIDQCLEQLSREPKKLPTLWINPELKTLDDFEKATVDDFKL 300 Query: 250 RSYEPHAAILAKVSV 264 YE H I A ++V Sbjct: 301 IGYESHPNIKADMAV 315 >gi|62901136|sp|Q5D189|TYSY_BACNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|60280529|gb|AAX18246.1| thymidylate synthase A [Bacillus subtilis subsp. natto] gi|291484369|dbj|BAI85444.1| thymidylate synthase [Bacillus subtilis subsp. natto BEST195] Length = 279 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 105/274 (38%), Positives = 157/274 (57%), Gaps = 13/274 (4%) Query: 3 QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 QY +++ +I G SD D T T S QMRFD S+ P+LTTKKV W Sbjct: 7 QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMSKQMRFDNSE-VPILTTKKVAW 65 Query: 53 KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110 K+ + ELLW + SN V+ L++ GV IWD+W +DG +G YG Q + +G +D Sbjct: 66 KTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVD 125 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 Q+ ++ L+ +P SRRHI WN +D M+L PC Q+YV +GKL ++ RS D+ Sbjct: 126 QVDYLLHQLKNNPSSRRHITMLWNPDDLDAMSLTPCVYETQWYVKHGKLHLEVRARSNDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P++ Sbjct: 186 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPEL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP + D +F +DF L +Y+ +L +V+V Sbjct: 246 WINPEVKDFYNFTIDDFKLINYKHGDKLLFEVAV 279 >gi|321311405|ref|YP_004203692.1| thymidylate synthase [Bacillus subtilis BSn5] gi|320017679|gb|ADV92665.1| thymidylate synthase [Bacillus subtilis BSn5] Length = 279 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 105/274 (38%), Positives = 156/274 (56%), Gaps = 13/274 (4%) Query: 3 QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 QY +++ +I G SD D T T S QMRFD S+ P+LTTKKV W Sbjct: 7 QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVAW 65 Query: 53 KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110 K+ + ELLW + SN V+ L++ GV IWD+W +DG +G YG Q + +G +D Sbjct: 66 KTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVD 125 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 Q+ ++ L+ +P SRRHI WN +D M+L PC Q+YV GKL ++ RS D+ Sbjct: 126 QVDYLLHQLKNNPSSRRHITMLWNPDDLDAMSLTPCVYETQWYVKQGKLHLEVRARSNDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P++ Sbjct: 186 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPEL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP + D +F +DF L +Y+ +L +V+V Sbjct: 246 WINPEVKDFYNFTIDDFKLINYKHGDKLLFEVAV 279 >gi|16078831|ref|NP_389651.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168] gi|221309650|ref|ZP_03591497.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168] gi|221313972|ref|ZP_03595777.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318895|ref|ZP_03600189.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323168|ref|ZP_03604462.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. SMY] gi|317412154|sp|P0CI79|TYSY1_BACSU RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1; AltName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|4699624|pdb|1B02|A Chain A, Crystal Structure Of Thymidylate Synthase A From Bacillus Subtilis gi|607048|emb|CAA55307.1| thymidylate synthetase [Bacillus subtilis] gi|2634152|emb|CAB13652.1| thymidylate synthase A [Bacillus subtilis subsp. subtilis str. 168] Length = 279 Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 106/274 (38%), Positives = 155/274 (56%), Gaps = 13/274 (4%) Query: 3 QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 QY +++ +I G SD D T T S QMRFD S+ P+LTTKKV W Sbjct: 7 QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVAW 65 Query: 53 KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110 K+ + ELLW + SN V+ L+ GV IWD+W +DG +G YG Q + +G +D Sbjct: 66 KTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVD 125 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 Q+ ++ L+ +P SRRHI WN +D MAL PC Q+YV +GKL ++ RS D+ Sbjct: 126 QVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P++ Sbjct: 186 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPEL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP + D F +DF L +Y+ +L +V+V Sbjct: 246 WINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 279 >gi|167522878|ref|XP_001745776.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775577|gb|EDQ89200.1| predicted protein [Monosiga brevicollis MX1] Length = 398 Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 102/244 (41%), Positives = 140/244 (57%), Gaps = 45/244 (18%) Query: 66 DSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PDYD 105 ++N + L V IWD KD G+LGP+YG QWR + DY Sbjct: 33 NTNANDLAARDVHIWDANGSKDFLEKQGLGHREEGDLGPVYGFQWRHFGAEYKDMHTDYS 92 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQ++ +++ ++ +P SRR I+SAWN I KMALPPCH + QFYV +G+LSCQLYQ Sbjct: 93 GQGVDQLAEVIEQIKTNPDSRRIIMSAWNPLDIPKMALPPCHTMCQFYVCDGELSCQLYQ 152 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH + + QL R PR Sbjct: 153 RSADMGLGVPFNIASYALLTYMIAQVTGLKPGDFVHTIGDAHVYLNHVDALEEQLKREPR 212 Query: 226 TLP----------------QMIINP----NIVDLLS-----FRYEDFTLRSYEPHAAILA 260 P Q + NP LLS F++EDF L+ Y+PH I Sbjct: 213 PFPTLSFKRDIEEYVHAFGQHVTNPLEHRPTAALLSLGIDDFKFEDFDLQGYKPHNRIAM 272 Query: 261 KVSV 264 +++ Sbjct: 273 DMAM 276 >gi|4388862|pdb|1BKO|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4388863|pdb|1BKO|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4388864|pdb|1BKO|C Chain C, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4388865|pdb|1BKO|D Chain D, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4388866|pdb|1BKP|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4388867|pdb|1BKP|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4389238|pdb|1BSF|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4389239|pdb|1BSF|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4558131|pdb|1BSP|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4558132|pdb|1BSP|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis Length = 278 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 106/274 (38%), Positives = 155/274 (56%), Gaps = 13/274 (4%) Query: 3 QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 QY +++ +I G SD D T T S QMRFD S+ P+LTTKKV W Sbjct: 6 QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVAW 64 Query: 53 KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110 K+ + ELLW + SN V+ L+ GV IWD+W +DG +G YG Q + +G +D Sbjct: 65 KTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVD 124 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 Q+ ++ L+ +P SRRHI WN +D MAL PC Q+YV +GKL ++ RS D+ Sbjct: 125 QVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDM 184 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P++ Sbjct: 185 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPEL 244 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP + D F +DF L +Y+ +L +V+V Sbjct: 245 WINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 278 >gi|300312740|ref|YP_003776832.1| thymidylate synthetase [Herbaspirillum seropedicae SmR1] gi|300075525|gb|ADJ64924.1| thymidylate synthetase protein [Herbaspirillum seropedicae SmR1] Length = 323 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 112/323 (34%), Positives = 172/323 (53%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ V++ GS + +RTG+ T S G MRFDL KGFP +TTK++ +KSVV EL Sbjct: 1 MKQYQDLIQDVLENGSWQDNRTGIRTLSIPGAMMRFDLQKGFPAVTTKRLAFKSVVGELC 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD+ A+++ + LGP+YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDQNANENADWLANPFRSGADDLGPVYGVQWRQWPAYKLID 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 +G +DQ+ + ++ +P SRR + WN Sbjct: 121 AAHTTQIEAARSKGFAIVSSLQDEGVEKVLLYKAVDQLRECLDTIVNNPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + G++S LY RS D+ LG PFN+A + L ++A + Sbjct: 181 CAVLDEVALPACHLLYQFLPNQSTGEISLCLYVRSNDIGLGTPFNLAEGAALLHLVARLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245 G++ F + +GD H+Y NH + QL+R+P LPQ+ I + + + RYE Sbjct: 241 GYKPRWFSYFVGDAHIYENHIDMVKEQLTRAPYPLPQLEIADRVPEFARTGRYEPQWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L +Y+ HA + A ++V Sbjct: 301 VEPSDFSLVNYQHHAPLTAPMAV 323 >gi|303228494|ref|ZP_07315325.1| thymidylate synthase [Veillonella atypica ACS-134-V-Col7a] gi|302516852|gb|EFL58763.1| thymidylate synthase [Veillonella atypica ACS-134-V-Col7a] Length = 263 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/265 (38%), Positives = 151/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLNIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ +++++++ Sbjct: 67 WQMQSNDVRKLQDMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ + MAL PC + V NG L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLPDMALQPCAYETLWDVGNGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239 + L M+A V G + G+F H + + H+Y NH + QLSR + L P++ +N +I D Sbjct: 179 AALLCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLSRRDQALRAPKIRVNSDITDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L YE + V+V Sbjct: 239 YEFSPDDIVLEGYEHLGKLAMTVAV 263 >gi|313892103|ref|ZP_07825699.1| thymidylate synthase [Dialister microaerophilus UPII 345-E] gi|313119495|gb|EFR42691.1| thymidylate synthase [Dialister microaerophilus UPII 345-E] Length = 263 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/266 (37%), Positives = 156/266 (58%), Gaps = 12/266 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL +++++++ GS +RTG+ M+FDL K FP+LTTK V +K+ + E+LW Sbjct: 6 QYLGIVKNILENGSLGNNRTGMPAYKLPHQIMQFDLEKEFPILTTKFVAFKTSIKEILWI 65 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L + IWDEW KDG +G YG Q + + Q+ +++ L+ Sbjct: 66 WQKQSNDVRELQKWNCHIWDEWMLKDGTIGKAYGYQLKEY--------KQVDTLLDLLKN 117 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V WNV + +MAL PC L + V +G+L+C L QRSGD+ LG+PFN+A Sbjct: 118 NPESRRMVVDLWNVKDLPEMALYPCAFLTMWDVTSDGRLNCMLVQRSGDMGLGVPFNMAQ 177 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVD 238 Y+ LT M+A V G + G F H + + H+Y NH E +QL+R P++++N ++ + Sbjct: 178 YAALTHMIAQVSGLKAGLFTHVINNAHIYQNHVEALKVQLARLDEAYEAPKIVLNKDVKN 237 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 F+ ED L +Y+ H + VSV Sbjct: 238 FYDFKPEDIVLENYKHHGKLPMAVSV 263 >gi|328553060|gb|AEB23552.1| thymidylate synthase [Bacillus amyloliquefaciens TA208] Length = 279 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 97/247 (39%), Positives = 146/247 (59%), Gaps = 3/247 (1%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVS 78 D T T S QMRFD S+ P+LTTKKV WK+ + ELLW + SN V+ L++ GV Sbjct: 34 DGTPAHTLSVISKQMRFDNSE-VPILTTKKVAWKTAIRELLWIWQLKSNDVNELNKMGVH 92 Query: 79 IWDEWADKDGELGPIYGVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWD+W +DG +G YG Q + +G +DQ+ ++ L+ +P SRRHI + WN Sbjct: 93 IWDQWKQEDGTIGKAYGYQLGKKNRMLNGEKVDQVDYLIHQLKNNPSSRRHITTLWNPDE 152 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 +D MAL PC Q+ + GKL +++ RS D+ LG PFN+ Y++L M+A V G++ G Sbjct: 153 LDSMALTPCVYGTQWLIKGGKLHLEVFCRSSDLALGNPFNVFQYNVLQRMIAQVTGYELG 212 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E+I +GD H+Y H + +Q+ R P++ INP++ D F +DF L +Y+ Sbjct: 213 EYIFNIGDCHVYTRHIDNLKIQMDREQHEAPELWINPDVKDFYDFTIDDFKLINYKHGDK 272 Query: 258 ILAKVSV 264 + +V+V Sbjct: 273 LYFEVAV 279 >gi|303231865|ref|ZP_07318576.1| thymidylate synthase [Veillonella atypica ACS-049-V-Sch6] gi|302513472|gb|EFL55503.1| thymidylate synthase [Veillonella atypica ACS-049-V-Sch6] Length = 263 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 101/265 (38%), Positives = 150/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLNIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ +++++++ Sbjct: 67 WQMQSNDVRKLQDMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ + MAL PC + V NG L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLPDMALQPCAYETLWDVGNGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239 + L M+A V G + G+F H + + H+Y NH + QLSR + L P++ +N I D Sbjct: 179 AALLCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLSRRDQALPAPKISVNSQITDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L YE + V+V Sbjct: 239 YDFTPDDIVLEGYEHLGKLAMTVAV 263 >gi|329121533|ref|ZP_08250156.1| thymidylate synthase [Dialister micraerophilus DSM 19965] gi|327468832|gb|EGF14305.1| thymidylate synthase [Dialister micraerophilus DSM 19965] Length = 263 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 100/266 (37%), Positives = 155/266 (58%), Gaps = 12/266 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL +++++++ GS +RTG+ M+FDL K FP+LTTK V +K+ + E+LW Sbjct: 6 QYLGIVKNILENGSLGNNRTGMSAYKLPHQIMQFDLEKEFPILTTKFVAFKTSIKEILWI 65 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L + IWDEW DG +G YG Q + + Q+ +++ L+ Sbjct: 66 WQKQSNDVRELQKWNCHIWDEWMLNDGTIGKAYGYQLKEYK--------QVDTLLDLLKN 117 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V WNV + +MAL PC L + V +G+L+C L QRSGD+ LG+PFN+A Sbjct: 118 NPESRRMVVDLWNVKDLPEMALYPCAFLTMWDVASDGRLNCMLVQRSGDMGLGVPFNMAQ 177 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVD 238 Y+ LT M+A V G + G F H + + H+Y NH E +QL+R P++++N ++ + Sbjct: 178 YAALTHMIAQVSGLKAGLFTHVINNAHIYQNHVEALKVQLARLDEAYEAPKIVLNKDVKN 237 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 F+ ED L +Y+ H + VSV Sbjct: 238 FYDFKPEDIVLENYKHHGKLPMAVSV 263 >gi|34419266|ref|NP_899279.1| dTMP (thymidylate) synthase [Vibrio phage KVP40] gi|34332947|gb|AAQ64102.1| dTMP (thymidylate) synthase [Vibrio phage KVP40] Length = 300 Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 118/299 (39%), Positives = 163/299 (54%), Gaps = 36/299 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL L ++ G +RTG T S ++R+DLSKGFPLLTTKK+ K++ ELL Sbjct: 2 MKNYLQLCTEILNEGDFLENRTGTNTVSVISRELRWDLSKGFPLLTTKKMATKAIFGELL 61 Query: 61 WFLRGDSNVSYLHRH------GVSIW-------DEWADKDG------ELGPIYGVQWRS- 100 WFL G +S L ++ IW +E A K G +LG +YG WR Sbjct: 62 WFLSGSGLISDLRKYTELSDEDFCIWQQNLDELNERAKKAGIVRNEDDLGYVYGKVWRKR 121 Query: 101 ---WPDYDGNVIDQISSI---VQSLRADPYS---RRHIVSAWNVALIDK-----MALPPC 146 D + DQI + + +++ DP RR IV AW+ + +ALPPC Sbjct: 122 LSVTADKEVTEFDQIHQLLCDIAAVKEDPTQSAQRRMIVEAWDPYFHTESNSVDVALPPC 181 Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206 H FQ +V NGK+S + QRS D FLG+PFNIASY+LL +LA + G + GE I + GDV Sbjct: 182 HYGFQVFVRNGKISLKWNQRSVDTFLGLPFNIASYALLVHILAQLTGLKVGELIFSGGDV 241 Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 H+Y +H Q QL R+PR LPQ+ + + LL+ R DF + Y+P+ A+ K+S Sbjct: 242 HIYEDHIVQVLKQLRRTPRELPQIQLPEFDTLSQLLTKRASDFVVYDYDPYPALKGKMS 300 >gi|4103865|gb|AAD01867.1| thymidylate synthase [Enterococcus faecalis] Length = 153 Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 82/153 (53%), Positives = 110/153 (71%) Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 ++++++ ++ +P SRR IVSAWN + MALPPCH +FQFYV+ GKLSCQLYQRS DVF Sbjct: 1 LANVIEMIKTNPDSRRLIVSAWNPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVF 60 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLT ++A G + GEF+HTLGD HLY NH EQ QLSR R+ P ++ Sbjct: 61 LGVPFNIASYALLTHLIAHETGLEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLV 120 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +NP+ + F ED + Y+PH I A ++V Sbjct: 121 LNPDKASVFDFDMEDIKVEGYDPHPTIKAPIAV 153 >gi|289582635|ref|YP_003481101.1| thymidylate synthase [Natrialba magadii ATCC 43099] gi|289532188|gb|ADD06539.1| thymidylate synthase [Natrialba magadii ATCC 43099] Length = 342 Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 120/344 (34%), Positives = 165/344 (47%), Gaps = 84/344 (24%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYLDL+ + G+ + +RTGV T S+F DL +G+PLLTTK++ W S++H Sbjct: 1 MQQYLDLVDAALSEGAYKPNRTGVDTISSFSEHYEVDLQEGYPLLTTKQMDGYRWNSMLH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103 E+ W+L G+ ++ L R IWD WAD++G L YG WR SWPD Sbjct: 61 EVCWYLSGEEHIQDL-REETKIWDAWADEEGHLDTAYGRFWRRFPVPEEPAQLPGESWPD 119 Query: 104 Y-----------DGNV---IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 DG DQ+ ++ +L P SRR +V+AW+ A LPPCH Sbjct: 120 ESHQWVTAEETADGETRRTFDQLQYVIDTLSDSPNSRRLVVNAWHPANAAVSTLPPCHYS 179 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 F F V +L+C L QRSGD+ LGIPFNIA+Y+LLT ++A GF+ G F HT+ D H+Y Sbjct: 180 FVFNVQGDRLNCHLTQRSGDIALGIPFNIAAYALLTKLVAKQTGFEPGTFAHTVVDAHVY 239 Query: 210 NNHFEQ---------------ADL-----------------------------------Q 219 ++ AD+ Q Sbjct: 240 CGRGDRGEWYADNLEALQTRLADVEERTEYREIREWLESEAPAEADGDERLDHVPGLLEQ 299 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 LSR P P + ++ +D LS YED TLR YE H + V+ Sbjct: 300 LSREPLERPTLEVDAATIDDLS--YEDVTLREYESHDGLTFGVA 341 >gi|33594075|ref|NP_881719.1| putative thymidylate synthase [Bordetella pertussis Tohama I] gi|62901354|sp|Q7VUE3|TYSY_BORPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|33564149|emb|CAE43421.1| putative thymidylate synthase [Bordetella pertussis Tohama I] gi|332383492|gb|AEE68339.1| thymidylate synthase [Bordetella pertussis CS] Length = 323 Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 110/323 (34%), Positives = 168/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G+ + +RTGV T S G +RFDL +GFP +TTKK+ +KS + E++ Sbjct: 1 MKQYLDLVQSILDQGAWQENRTGVRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD+ A+++ + LGP+YGVQWR WP Y Sbjct: 61 GFLRATRSAAQFRALGCKVWDQNANENEQWLANPYREGPDDLGPVYGVQWRHWPAYKLLP 120 Query: 105 ---------------------DGN---------VIDQISSIVQSLRADPYSRRHIVSAWN 134 D N +DQ+ + ++R P RR + WN Sbjct: 121 SSAGGQVADALARGYRQVAEVDENGAPHVLLYKAVDQLRQCLDTIRQSPGDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF + G ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNAGTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE------ 245 G++ F + +GD H+Y NH QL+R P PQ++++ I D ++ +YE Sbjct: 241 GYKPRWFSYFIGDAHVYENHLPMLREQLAREPYPAPQLVLSDRIPDFAVTGKYEPQWLEQ 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DFTL Y+ HA + A ++V Sbjct: 301 VEPGDFTLSGYQHHAPLTAPMAV 323 >gi|4378161|gb|AAD19406.1| thymidylate synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 261 Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 98/235 (41%), Positives = 135/235 (57%), Gaps = 41/235 (17%) Query: 34 MRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW--------- 83 MRFDLSKG P+LTTKKV ++ + E+LWFL GD+N+ L GVSIW +W Sbjct: 2 MRFDLSKGRIPILTTKKVSYRLAIREMLWFLSGDTNIRPLVEQGVSIWSDWPLARYQAET 61 Query: 84 -------------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124 A K G+LGP+YG QWR W DG V DQI++++++L+++P Sbjct: 62 GALLSKKEFEAKILADTEFAKKWGDLGPVYGRQWRRWQGSDGQVYDQIATLIETLKSNPS 121 Query: 125 SRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR + WNVA + MALPPCH ++Q++V +G+L+ LYQRS DVFLG F Sbjct: 122 SRRMLFHGWNVAELKDMALPPCHMVYQYHVTSDGRLNSLLYQRSADVFLGAAFQFGRRGR 181 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ-----------ADLQLSRSPRTL 227 L MLA G G+ + T GDVH+Y NH +Q + L+L+R P ++ Sbjct: 182 LQAMLADQAGLALGDLVWTGGDVHIYRNHIDQMKNSLPVTSGFSRLELTRHPNSI 236 >gi|311977889|ref|YP_003987009.1| bifunctional dihydrofolate reductase-thymidylate synthase [Acanthamoeba polyphaga mimivirus] gi|82000169|sp|Q5UQG3|DRTS_MIMIV RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|55417112|gb|AAV50762.1| thymidylate synthase [Acanthamoeba polyphaga mimivirus] gi|308204867|gb|ADO18668.1| bifunctional dihydrofolate reductase-thymidylate synthase [Acanthamoeba polyphaga mimivirus] Length = 563 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 167/292 (57%), Gaps = 34/292 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QY++L++ +++ G ++ R + T+S FGYQ+++DLSKG+P+ T K+ + K++ EL+W Sbjct: 273 NQYIELVKTIMEKGIVKQTRNSI-TKSIFGYQLKYDLSKGYPIQTIKRSYPKAIFEELMW 331 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD-----------GELGPIYGVQWRSW--------P 102 +RG ++VS L + GV +WD+ + KD G++GP YG Q R W Sbjct: 332 MIRGQTDVSILQKKGVHVWDKNSSKDFLSKYNLPYEEGDIGPGYGFQMRYWGAEYTDCKT 391 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------- 155 Y G IDQ++ ++S++ +P+ RR +++ WN + +DKMAL PCH + F VD Sbjct: 392 SYQGQGIDQLNKCIESIQNNPHDRRIMINLWNCSDLDKMALAPCHFCYMFGVDLYEVPTT 451 Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 G+L+C L QRS DV LG +N + +LLT ++A+ G +H++ D H+Y +H Sbjct: 452 SGKKGRLNCHLVQRSWDVLLG--WNTTTAALLTYLIANHCDLDPGILVHSISDAHIYQSH 509 Query: 213 FEQADLQ--LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 + + L R R P ++I + + ++D + +Y P +I A++ Sbjct: 510 IDSGAISQLLQRKCRKFPNLVIRNKKEKIDDYEFDDLIIENYYPCPSISAEM 561 >gi|319645637|ref|ZP_07999869.1| thymidylate synthase A [Bacillus sp. BT1B_CT2] gi|317392523|gb|EFV73318.1| thymidylate synthase A [Bacillus sp. BT1B_CT2] Length = 300 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 104/275 (37%), Positives = 156/275 (56%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ +I+ G SD D T T S +MRFD S+ P+LTTKKV Sbjct: 27 QQYNAIIQKIIESGISDEEYQVRTKWDSDGTPAHTLSIMSEKMRFDNSE-VPILTTKKVA 85 Query: 52 WKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVI 109 WK+ + ELLW + SN V L+ GV IWD+W +DG +G YG Q + +G + Sbjct: 86 WKTAIKELLWIWQLKSNDVQVLNDMGVHIWDQWRLEDGTIGAAYGYQLGKKNRTVNGQKV 145 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRH+ WN +D MAL PC Q+YV GKLS ++ RS D Sbjct: 146 DQVDYLLHQLKHNPSSRRHLTMLWNPDDLDGMALTPCVYETQWYVKEGKLSLEVRARSND 205 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V+G++ GE+I +GD H+Y H + ++Q+ R P+ Sbjct: 206 MALGNPFNVFQYNVLQRMIAQVLGYELGEYIFNIGDCHIYTRHIDNLNIQMKREQYEAPK 265 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP+I + F +DF L Y+ + +V+V Sbjct: 266 LWINPDIKNFYDFTIDDFKLIDYKHGDKLTFEVAV 300 >gi|294917252|ref|XP_002778435.1| dihydrofolate reductase/thymidilate synthase, putative [Perkinsus marinus ATCC 50983] gi|239886828|gb|EER10230.1| dihydrofolate reductase/thymidilate synthase, putative [Perkinsus marinus ATCC 50983] Length = 422 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 96/203 (47%), Positives = 132/203 (65%), Gaps = 23/203 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 ++YL L+ +I+ G D DRTGVGT++ F MRF L G FPLLTTK+V W+ VV ELL Sbjct: 207 YEYLRLIEEIIENGEDADDRTGVGTKTIFSCHMRFSLRDGVFPLLTTKRVFWRGVVEELL 266 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-PDY--- 104 WF+RGD+N +L GV IWD E+ D ++G+LGP+YG QWR + DY Sbjct: 267 WFIRGDTNAKHLSDQGVKIWDLNGTREFLDGRGLTHREEGDLGPVYGFQWRHFGADYVDM 326 Query: 105 -----DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK- 158 +DQ++ +++ L+ +P RR I++AWN + MALPPCH + QFYV++ + Sbjct: 327 HADYSQSGGVDQLAEVIRQLKENPMDRRIIMTAWNPTALPLMALPPCHMMCQFYVNSKQE 386 Query: 159 LSCQLYQRSGDVFLGIPFNIASY 181 LSC +YQRS D+ LG+PFNIASY Sbjct: 387 LSCAMYQRSADMGLGVPFNIASY 409 >gi|152980241|ref|YP_001352883.1| thymidylate synthase [Janthinobacterium sp. Marseille] gi|151280318|gb|ABR88728.1| thymidylate synthase [Janthinobacterium sp. Marseille] Length = 324 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 109/324 (33%), Positives = 171/324 (52%), Gaps = 60/324 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHEL 59 M QYLDL+R V+ G+ + +RTG+ T S G +RFDL K GFP +TTK++ +KSV+ EL Sbjct: 1 MKQYLDLVRTVLDTGTWQENRTGIRTISIPGAMLRFDLQKDGFPAITTKRLAFKSVIGEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY--- 104 + FLR + + G +WD+ A+++ E LGP+YGVQWR WP Y Sbjct: 61 IGFLRATRSAAEFRELGCKVWDQNANENTEWLNNPYRTGPDDLGPVYGVQWRQWPAYKLL 120 Query: 105 ------------------------DGN-------VIDQISSIVQSLRADPYSRRHIVSAW 133 +G IDQ+ + ++ +P SRR + W Sbjct: 121 DADQQAQIDDAQKRGFRVVSTVNDEGKDKVLLYKAIDQLRDCLDTIIKNPGSRRILFHGW 180 Query: 134 NVALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 N A +D +ALP CH L+QF + ++S LY RS D+ LG PFN+A + L ++ + Sbjct: 181 NCADLDAIALPACHLLYQFIPNATTKEISLCLYIRSNDIGLGTPFNLAEAAALLHVVGRL 240 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE----- 245 G+ F + +GD H+Y NH + + Q++R+P PQ++++ I D ++ +YE Sbjct: 241 TGYTPKWFTYFIGDAHIYENHLDMLNEQMTRAPHPAPQLVLSDRIPDFAVTGKYEPEWLE 300 Query: 246 -----DFTLRSYEPHAAILAKVSV 264 DF+L +Y+ HA + A ++V Sbjct: 301 KLEPGDFSLENYQHHAPLTAPMAV 324 >gi|52080405|ref|YP_079196.1| thymidylate synthase [Bacillus licheniformis ATCC 14580] gi|52785784|ref|YP_091613.1| thymidylate synthase [Bacillus licheniformis ATCC 14580] gi|3122985|sp|Q59212|TYSY_BACLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|62901267|sp|Q65J44|TYSY_BACLD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|1359509|emb|CAA90533.1| thymidylate synthetase [Bacillus licheniformis] gi|52003616|gb|AAU23558.1| thymidylate synthase A [Bacillus licheniformis ATCC 14580] gi|52348286|gb|AAU40920.1| ThyA [Bacillus licheniformis ATCC 14580] Length = 279 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 104/275 (37%), Positives = 156/275 (56%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ +I+ G SD D T T S +MRFD S+ P+LTTKKV Sbjct: 6 QQYNAIIQKIIESGISDEEYQVRTKWDSDGTPAHTLSIMSEKMRFDNSE-VPILTTKKVA 64 Query: 52 WKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVI 109 WK+ + ELLW + SN V L+ GV IWD+W +DG +G YG Q + +G + Sbjct: 65 WKTAIKELLWIWQLKSNDVQVLNDMGVHIWDQWRLEDGTIGAAYGYQLGKKNRTVNGQKV 124 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRH+ WN +D MAL PC Q+YV GKLS ++ RS D Sbjct: 125 DQVDYLLHQLKHNPSSRRHLTMLWNPDDLDGMALTPCVYETQWYVKEGKLSLEVRARSND 184 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V+G++ GE+I +GD H+Y H + ++Q+ R P+ Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVLGYELGEYIFNIGDCHIYTRHIDNLNIQMKREQYEAPK 244 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP+I + F +DF L Y+ + +V+V Sbjct: 245 LWINPDIKNFYDFTIDDFKLIDYKHGDKLTFEVAV 279 >gi|257389045|ref|YP_003178818.1| thymidylate synthase [Halomicrobium mukohataei DSM 12286] gi|257171352|gb|ACV49111.1| thymidylate synthase [Halomicrobium mukohataei DSM 12286] Length = 334 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 97/232 (41%), Positives = 134/232 (57%), Gaps = 24/232 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYLDL+ ++ G+ + +RTGV T ++F DL++GFPLLTTK + W S++H Sbjct: 1 MQQYLDLVDSTLRGGTYKPNRTGVDTVASFSQHYEVDLAEGFPLLTTKDLSGFRWNSLIH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103 ELLW+L G+ ++ L R IWD WAD++G L YG WR SWPD Sbjct: 61 ELLWYLSGEEHIREL-REETGIWDAWADEEGHLDTAYGRFWRRYPIPDDDARLPGESWPD 119 Query: 104 ------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 D DQ++ ++ L +P SRR +V+AW+ A LPPCH F F V G Sbjct: 120 DAHRWVNDDGTFDQLAYVIDQLEENPRSRRLVVNAWHPANATVSTLPPCHYTFVFNVQGG 179 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 +L+ L QRSGD+ LG+PFN+A+YSLL +A F+ G F HT+ D H+Y Sbjct: 180 RLNVHLTQRSGDIALGVPFNVAAYSLLAQAVAQRTDFELGSFAHTIVDAHVY 231 >gi|326483245|gb|EGE07255.1| thymidylate synthase [Trichophyton equinum CBS 127.97] Length = 310 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 118/304 (38%), Positives = 152/304 (50%), Gaps = 74/304 (24%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 40 HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+ Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPV--- 156 Query: 97 QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154 R I+SAWN A + KMALPPCH QFYV Sbjct: 157 ------------------------------RIILSAWNPADLKKMALPPCHMFAQFYVSF 186 Query: 155 ------DNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 D GK LSC LYQRS D+ LG+PFNIASY+LLT M A G FIHT+ Sbjct: 187 PPQKAGDEGKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPGTFIHTM 246 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPN---IVDLLSFRYEDFTLRSYEPHAAILA 260 GD H+Y +H E QL+R P P + IN ++ ++ DF + Y+PH I Sbjct: 247 GDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDYKPHKLIKM 306 Query: 261 KVSV 264 K+S+ Sbjct: 307 KMSI 310 >gi|330891851|gb|EGH24512.1| thymidylate synthase [Pseudomonas syringae pv. mori str. 301020] Length = 298 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 100/287 (34%), Positives = 155/287 (54%), Gaps = 48/287 (16%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEF 287 >gi|2293408|gb|AAC26324.1| thymidylate synthase [Bacillus subtilis] Length = 231 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 94/232 (40%), Positives = 140/232 (60%), Gaps = 3/232 (1%) Query: 35 RFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPI 93 RFD S+ P+LTTKKV WK+ + ELLW + SN V+ L++ GV IWD+W +DG +G Sbjct: 1 RFDNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHA 59 Query: 94 YGVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 YG Q + + +G +DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+ Sbjct: 60 YGFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQW 119 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 YV GKL ++ RS D+ LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H Sbjct: 120 YVKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRH 179 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +Q+ R P++ INP + D F +DF L +Y+ +L +V+V Sbjct: 180 IDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 231 >gi|33595476|ref|NP_883119.1| putative thymidylate synthase [Bordetella parapertussis 12822] gi|33599861|ref|NP_887421.1| putative thymidylate synthase [Bordetella bronchiseptica RB50] gi|62901355|sp|Q7W1A9|TYSY_BORPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901356|sp|Q7WP13|TYSY_BORBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|33565554|emb|CAE40196.1| putative thymidylate synthase [Bordetella parapertussis] gi|33567458|emb|CAE31371.1| putative thymidylate synthase [Bordetella bronchiseptica RB50] Length = 323 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 109/323 (33%), Positives = 167/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G+ + +RTGV T S G +RFDL +GFP +TTKK+ +KS + E++ Sbjct: 1 MKQYLDLVQSILDQGAWQENRTGVRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLR + + G +WD+ A+++ + LGP+YGVQWR WP Y Sbjct: 61 GFLRATRSAAQFRALGCKVWDQNANENEQWLANPYREGPDDLGPVYGVQWRHWPAYKLLP 120 Query: 106 ----GNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 G V +DQ+ + ++ P RR + WN Sbjct: 121 RSAGGQVADALARGYRQVAEVAENGAPHVLLYKAVDQLRQCLDTIHQSPGDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF + G ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNAGTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE------ 245 G++ F + +GD H+Y NH QL+R P PQ++++ I D ++ +YE Sbjct: 241 GYKPRWFSYFIGDAHVYENHLPMLREQLTREPYPAPQLVLSDRIPDFAVTGKYEPQWLEQ 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DFTL Y+ HA + A ++V Sbjct: 301 VEPGDFTLSGYQHHAPLTAPMAV 323 >gi|187935542|ref|YP_001887622.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B] gi|187723695|gb|ACD24916.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B] Length = 263 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 150/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL++ ++++ G +RTG+ T M+F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V IWDEW +DG +G YG + + DQI ++ SL+ Sbjct: 67 FKDQSNDVKKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIHSLKN 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ W + +D AL PC L + V +G+L+C L QRSGD LGIPFN + Y Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGRLNCMLVQRSGDWPLGIPFNTSQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVDL 239 ++LT ++A V G + G F H + + H+Y N + QL R ++ P++ INP I D Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVINNAHIYENQIDGMKTQLERKDQSYDAPKLWINPEIKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L +Y+ H +I VSV Sbjct: 239 YDFTPDDIKLENYKHHESIKMPVSV 263 >gi|251781262|ref|ZP_04824178.1| thymidylate synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081709|gb|EES47770.1| thymidylate synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 263 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 148/265 (55%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL++ ++++ G +RTG+ T M+F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V IWDEW +DG +G YG + + DQI ++ SL+ Sbjct: 67 FKDQSNDVKKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIDSLKN 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ W + +D AL PC L + V +GKL+C L QRSGD LGIPFN + Y Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGKLNCMLVQRSGDWPLGIPFNTSQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVDL 239 ++LT ++A V G + G F H + + H+Y N + QL R + P++ INP I D Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVINNAHIYENQIDGMKTQLERKDQAYDAPKLWINPEIKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L Y+ H +I VS+ Sbjct: 239 YDFTPDDIKLEDYKHHESIKMPVSI 263 >gi|313126201|ref|YP_004036471.1| thymidylate synthase [Halogeometricum borinquense DSM 11551] gi|312292566|gb|ADQ67026.1| thymidylate synthase [Halogeometricum borinquense DSM 11551] Length = 332 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 99/230 (43%), Positives = 132/230 (57%), Gaps = 22/230 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYLDL+ V+ G + +RTGV T S F DL +GFPLLTTK + W S++H Sbjct: 1 MRQYLDLVTDVLSNGQHKPNRTGVDTISAFSRHYEVDLQEGFPLLTTKDLSGFRWNSLIH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR------------SWPD-- 103 E +W+L G+ ++ L R IWD WAD++G L YG WR +WP+ Sbjct: 61 EFVWYLSGEEHIRTL-REETGIWDAWADEEGRLDTAYGRFWRRFPVPDEGLPGEAWPEDT 119 Query: 104 ----YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159 D DQI ++ +LR +P SRR +V+AW+ A LPPCH F F V KL Sbjct: 120 HRWMNDEGTFDQIQYVLDTLRENPNSRRMVVNAWHPANAAVSTLPPCHYSFVFNVQGDKL 179 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 + L QRSGD+ LGIPFNIA+Y+LL +A GF+ G+F HT+ D H+Y Sbjct: 180 NLHLTQRSGDIALGIPFNIAAYALLATAVAQRTGFEVGKFAHTVVDAHVY 229 >gi|292657031|ref|YP_003536928.1| thymidylate synthase [Haloferax volcanii DS2] gi|291372732|gb|ADE04959.1| thymidylate synthase [Haloferax volcanii DS2] Length = 332 Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 117/334 (35%), Positives = 163/334 (48%), Gaps = 74/334 (22%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYLDL+ V+ G + +RTGV T S F DL +GFPLLTTK + W S++H Sbjct: 1 MRQYLDLVTDVLGTGRHKPNRTGVDTISGFSKHYTVDLQEGFPLLTTKDLSGFRWNSLIH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR------------SWPD-- 103 ELLW+L G+ ++ L R IWD WAD++G L YG WR +WPD Sbjct: 61 ELLWYLSGEEHIRTL-REETGIWDAWADEEGHLDTAYGRFWRRYPVPEEGLAGEAWPDDG 119 Query: 104 ----YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159 D DQ++ ++ +L +P SRR +++AW+ A LPPCH F F V +L Sbjct: 120 HRWMNDEGTFDQLAYVLDTLDENPNSRRLVINAWHPANAAVSTLPPCHYTFVFNVQGDEL 179 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL----------Y 209 + L QRSGD+ LG+PFN+A+Y++L ++A GF+ G F HT+ D H+ Y Sbjct: 180 NLHLTQRSGDIALGVPFNLAAYAILAQVVAQRAGFELGSFAHTIVDAHVYCGAGERGAWY 239 Query: 210 NNHF----------------------------EQAD------------LQLSRSPRTLPQ 229 +H E+AD LQ SR PR P Sbjct: 240 GDHLDELQSRLADVQSPDEYLDVREWLLDAAPEEADGEEDYDHVPGLLLQASREPRERPA 299 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 + + ++ LSF ED LR Y+P I V+ Sbjct: 300 LDVADVPLEDLSF--EDIVLRDYDPADGIRFAVA 331 >gi|218678176|ref|ZP_03526073.1| thymidylate synthase [Rhizobium etli CIAT 894] Length = 130 Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 80/119 (67%), Positives = 102/119 (85%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLAHVMEKGSDRGDRTGTGTRSVFGYQMRFDLQEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 WFL+GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG +DQI+++V+ + Sbjct: 61 WFLKGDTNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHVDQIANLVKGI 119 >gi|134094287|ref|YP_001099362.1| thymidylate synthase [Herminiimonas arsenicoxydans] gi|133738190|emb|CAL61235.1| thymidylate synthase (TS) (TSase) [Herminiimonas arsenicoxydans] Length = 324 Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 108/324 (33%), Positives = 170/324 (52%), Gaps = 60/324 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHEL 59 M QYLDL+R V+ G+ + +RTG+ T S G +RFDL K GFP +TTK++ +KSV+ EL Sbjct: 1 MKQYLDLVRTVLDSGTWQENRTGIRTISIPGAMLRFDLQKDGFPAITTKRLAFKSVIGEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY--- 104 + FLR + + G +WD+ A+++ E LGP+YGVQWR WP Y Sbjct: 61 IGFLRASRSAAEFRALGCKVWDQNANENAEWLNNPYRLGEDDLGPVYGVQWRQWPAYKLL 120 Query: 105 ------------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAW 133 +G IDQ+ + ++ +P SRR + W Sbjct: 121 DADNKLQIQDAQKRGFRLISAVNDEGIDKVLMYKAIDQLRDCLDTIINNPASRRILFHGW 180 Query: 134 NVALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 N A +D +ALP CH L+QF + ++S LY RS D+ LG PFN+A + L ++ + Sbjct: 181 NCAELDAIALPACHLLYQFLPNQTTKEISLCLYIRSNDIGLGTPFNLAEAAALLHVVGRL 240 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE----- 245 G+ F + +GD H+Y NH + + Q++R P P+++++ I D ++ +YE Sbjct: 241 TGYTPKWFTYFIGDAHIYENHLDMLNEQMTREPYAAPRLVLSDRIPDYRVTGKYEPEWLE 300 Query: 246 -----DFTLRSYEPHAAILAKVSV 264 DF+L +Y+ HA + A ++V Sbjct: 301 KLEPGDFSLENYQHHAPLSAPMAV 324 >gi|293607661|ref|ZP_06689993.1| thymidylate synthase [Achromobacter piechaudii ATCC 43553] gi|292813946|gb|EFF73095.1| thymidylate synthase [Achromobacter piechaudii ATCC 43553] Length = 323 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 108/323 (33%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ GS + +RTG+ T S G +RFDL KGFP +TTKK+ +KS + E++ Sbjct: 1 MKQYLDLVQSILDTGSWQENRTGIRTISMPGASLRFDLQKGFPAVTTKKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD+ A+++ + LGP+YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRELGCKVWDQNANENSQWLANPYREGPDDLGPVYGVQWRQWPAYKLLD 120 Query: 105 ----------------------DGNV--------IDQISSIVQSLRADPYSRRHIVSAWN 134 +G V +DQ+ + ++ P RR + WN Sbjct: 121 ASRPGQLEDALSRGYSKVADLEEGGVPKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF + ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE------ 245 G+ F + +GD H+Y NH QL+R P P+++++ I D ++ RYE Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTREPYESPRLVLSDRIPDFAVTGRYEPEWLEK 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y HA + A ++V Sbjct: 301 VEPSDFSLSGYTHHAPLTAPMAV 323 >gi|311108781|ref|YP_003981634.1| thymidylate synthase [Achromobacter xylosoxidans A8] gi|310763470|gb|ADP18919.1| thymidylate synthase [Achromobacter xylosoxidans A8] Length = 323 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 107/323 (33%), Positives = 164/323 (50%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G+ + +RTG+ T S G +RFDL KGFP +TTKK+ +KS + E++ Sbjct: 1 MKQYLDLVQSILDTGAWQENRTGIRTLSMPGASLRFDLQKGFPAVTTKKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD+ A+++ + LGP+YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRELGCKVWDQNANENSQWLANPYREGPDDLGPVYGVQWRQWPAYKMLD 120 Query: 105 ----------------------DGNV--------IDQISSIVQSLRADPYSRRHIVSAWN 134 +G V +DQ+ + ++ P RR + WN Sbjct: 121 ASRPAQIADALSRGYAQVAELEEGGVPKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF + ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE------ 245 G+ F + +GD H+Y NH QL+R P P ++++ I D ++ RYE Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTREPYEAPTLVLSDRIPDFAVTGRYEPEWLEK 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y HA + A ++V Sbjct: 301 VEPGDFSLSGYTHHAPLTAAMAV 323 >gi|188590339|ref|YP_001922592.1| thymidylate synthase [Clostridium botulinum E3 str. Alaska E43] gi|188500620|gb|ACD53756.1| thymidylate synthase [Clostridium botulinum E3 str. Alaska E43] Length = 263 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL++ ++++ G +RTG+ T M+F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V IWDEW +DG +G YG + + DQI ++ SL+ Sbjct: 67 FKDQSNDVRKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIYSLKN 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ W + +D AL PC L + V +G+L+C L QRSGD LGIPFN + Y Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGRLNCMLVQRSGDWPLGIPFNTSQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVDL 239 ++LT ++A V G + G F H + + H+Y N + QL R + P++ INP I D Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVVNNAHIYENQIDGMKTQLERKDQAYDAPKLWINPEIKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L +Y+ H +I VSV Sbjct: 239 YDFTPDDIKLENYKHHESIKMPVSV 263 >gi|163858352|ref|YP_001632650.1| thymidylate synthase [Bordetella petrii DSM 12804] gi|163262080|emb|CAP44382.1| thyA [Bordetella petrii] Length = 323 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 108/323 (33%), Positives = 166/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++ ++ GS + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLSLIQSILDHGSWQENRTGIRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDY---- 104 F+RG + + G +WD+ A+++ +LGP+YGVQWR WP Y Sbjct: 61 GFMRGARSAADFRALGCKVWDQNANENANWLANPYREGPDDLGPVYGVQWRRWPAYKLLP 120 Query: 105 ---------------------DGN---------VIDQISSIVQSLRADPYSRRHIVSAWN 134 D N +DQ+ + ++ ++P RR + WN Sbjct: 121 LANDAQIRDALGRGYAQVAQLDENGAPHVLLYKAVDQLRQCLDTIHSNPQDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF + ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-LLSFRYE------ 245 G+ F + +GD H+Y NH QL+R P P+++++ I D ++ RYE Sbjct: 241 GYTPRWFSYFIGDAHIYENHLPMLREQLTREPYEAPRLVLSDRIPDYAVTGRYEPQWLEQ 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF L Y+ H A+ A ++V Sbjct: 301 VEPTDFALEGYQHHPALTAPMAV 323 >gi|317405520|gb|EFV85827.1| thymidylate synthase [Achromobacter xylosoxidans C54] Length = 323 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 107/323 (33%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + E++ Sbjct: 1 MKQYLDLVQSILDTGAWQENRTGIRTLSMPGASLRFDLQQGFPAVTTKKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLRG + + G +WD+ A+++ + LGP+YGVQWR WP Y Sbjct: 61 GFLRGVRSAAEFRELGCKVWDQNANENAQWLANPYREGPDDLGPVYGVQWRQWPAYKLLD 120 Query: 105 ---DGNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 DG + +DQ+ + ++ P RR + WN Sbjct: 121 ADRDGQIADALGRGYTKVADLQEGGASKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF + ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245 G+ F + +GD H+Y NH QL+R+P P++ ++ I D + RYE Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTRTPLEAPRLALSDRIPDFAQTGRYEPEWLEK 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y HA + A ++V Sbjct: 301 VEPGDFSLAGYTHHAPLTAPMAV 323 >gi|296222344|ref|XP_002757146.1| PREDICTED: thymidylate synthase-like isoform 3 [Callithrix jacchus] Length = 230 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 84/173 (48%), Positives = 117/173 (67%), Gaps = 1/173 (0%) Query: 93 IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 ++G+Q R S DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L Q Sbjct: 58 VFGMQARYSLRDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQ 117 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV NG+LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y N Sbjct: 118 FYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLN 177 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H E +QL R PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 178 HIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFKVEGYNPHPTIKMEMAV 230 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL 38 QYL + H+++ G + DRTG GT S FG Q R+ L Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSL 67 >gi|187477016|ref|YP_785040.1| thymidylate synthase [Bordetella avium 197N] gi|115421602|emb|CAJ48112.1| thymidylate synthase [Bordetella avium 197N] Length = 323 Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 107/323 (33%), Positives = 164/323 (50%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ +I G+ + +RTGV T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MRQYLDLVQSIIDQGAWQENRTGVRTLSLPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLR + + G +WD+ A+++ + LGP+YGVQWR+WP Y Sbjct: 61 GFLRSARSAADFRALGCKVWDQNANENSQWLNNPYREGLDDLGPVYGVQWRNWPAYKLLR 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 +DQ+ + ++ +P RR + WN Sbjct: 121 ADRQAQISDALSRGYAKVAELDEAGVPQVLLYKAVDQLRQCLDTIHRNPSDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF + ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNASTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE------ 245 G+ F + +GD H+Y NH + QL R P P+++++ I D + RYE Sbjct: 241 GYTPRWFSYFIGDAHIYENHLDMLREQLKREPHASPRLLLSDRIPDFRQTQRYEPEWLEH 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y+ HA + A ++V Sbjct: 301 VEPSDFSLEGYQHHAPLTAPMAV 323 >gi|290968843|ref|ZP_06560380.1| thymidylate synthase [Megasphaera genomosp. type_1 str. 28L] gi|290781139|gb|EFD93730.1| thymidylate synthase [Megasphaera genomosp. type_1 str. 28L] Length = 263 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 147/265 (55%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ +++K G +RTG+ T M+FDL++ FP+LTTK V +K+ V ELLW Sbjct: 7 QYLTIVENILKNGYYADNRTGIPTYKLPHQVMQFDLAEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L +WDEW DG +G YG Q R + Q +++ +L+ Sbjct: 67 WQLQSNNVHDLQAMNCHVWDEWMRPDGTIGKAYGYQIRKY--------KQTDTLLHTLKT 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP +RR IVS WN+ + MAL PC + V++G+L+C L QRSGD+ LG+PFN+ Y Sbjct: 119 DPQNRRMIVSLWNIEDLPDMALEPCAYQTLWDVNDGRLNCLLIQRSGDMGLGVPFNMTQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS--PRTLPQMIINPNIVDL 239 ++L ++A V G G F H + + H+Y NH QL+R P + IN NI D Sbjct: 179 AVLVHLIAQVTGLTPGLFTHVINNAHIYENHVAALQTQLARKELAPAAPTLEINKNIKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 +F ED L Y+ + +V+V Sbjct: 239 YAFTPEDIQLIHYKHLGKLPMEVAV 263 >gi|114672497|ref|XP_001150227.1| PREDICTED: thymidylate synthetase isoform 1 [Pan troglodytes] Length = 230 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 84/173 (48%), Positives = 117/173 (67%), Gaps = 1/173 (0%) Query: 93 IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 ++G+Q R S DY G +DQ+ ++ +++++P RR I+ AWN + MALPPCH L Q Sbjct: 58 VFGMQARYSLRDYSGQGVDQLQRVIDTIKSNPDDRRIIMCAWNPRDLPLMALPPCHALCQ 117 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y N Sbjct: 118 FYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLN 177 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H E +QL R PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 178 HIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 230 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL 38 QYL + H+++ G + DRTG GT S FG Q R+ L Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSL 67 >gi|150019760|ref|YP_001312014.1| thymidylate synthase [Clostridium beijerinckii NCIMB 8052] gi|189036930|sp|A6M378|TYSY_CLOB8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|149906225|gb|ABR37058.1| Thymidylate synthase [Clostridium beijerinckii NCIMB 8052] Length = 263 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 99/265 (37%), Positives = 145/265 (54%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL + +++ G +RTGV T M+F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 KYLAIANDILENGYFDNNRTGVKTYKLPHQIMQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V IWDEW +DG +G YG + + DQI ++ +L+ Sbjct: 67 FKDQSNSVKELQSQNVKIWDEWMMEDGTIGTSYGWIVKKF--------DQIDKLIDALKN 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ W + +D L PC L + V +GKL+C L QRSGD LG+PFN + Y Sbjct: 119 NPQDRRMMINLWQIPYLDSAPLYPCCFLTMWDVTDGKLNCMLVQRSGDWGLGVPFNTSQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS--PRTLPQMIINPNIVDL 239 ++L +LA V G + G F H + + H+Y N + LQL+R P++ INP I + Sbjct: 179 AVLVHLLAQVTGLKPGLFTHVINNAHIYENQVDGLKLQLTRKNDAYNAPKLWINPEITNF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L Y+ H +I VSV Sbjct: 239 YDFTPDDIKLEDYKHHESIKMDVSV 263 >gi|2293410|gb|AAC26325.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23] Length = 230 Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 92/231 (39%), Positives = 139/231 (60%), Gaps = 3/231 (1%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIY 94 FD S+ P+LTTKKV WK+ + ELLW + SN V+ L++ GV IWD+W +DG +G Y Sbjct: 1 FDNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAY 59 Query: 95 GVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 G Q + + +G +DQ+ ++ L+ +P SRRHI W+ +D MAL PC Q+Y Sbjct: 60 GFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWSPDELDSMALTPCVYETQWY 119 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V GKL ++ RS D+ LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H Sbjct: 120 VKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHI 179 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +Q+ R P++ INP + D F +DF L +Y+ +L +V+V Sbjct: 180 DNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLFNYKHGDKLLFEVAV 230 >gi|18150849|dbj|BAB83676.1| thymidylate synthase [Homo sapiens] gi|119622125|gb|EAX01720.1| thymidylate synthetase, isoform CRA_e [Homo sapiens] Length = 230 Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 84/173 (48%), Positives = 116/173 (67%), Gaps = 1/173 (0%) Query: 93 IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 ++G+Q R S DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L Q Sbjct: 58 VFGMQARYSLRDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQ 117 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y N Sbjct: 118 FYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLN 177 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H E +QL R PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 178 HIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 230 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL 38 QYL ++H+++ G + DRTG GT S FG Q R+ L Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSL 67 >gi|76802103|ref|YP_327111.1| thymidylate synthase [Natronomonas pharaonis DSM 2160] gi|76557968|emb|CAI49553.1| thymidylate synthase [Natronomonas pharaonis DSM 2160] Length = 342 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/344 (34%), Positives = 165/344 (47%), Gaps = 84/344 (24%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QY DL+ V+ G+ + +RTGV T ++F + DL GFPLLTTK++ W S++H Sbjct: 1 MQQYHDLVSDVLAGGTHKPNRTGVDTIASFSHHYEVDLGAGFPLLTTKRMDGYRWNSLIH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103 ELLW+L G+ ++ L R IWD WAD +G L YG WR SWPD Sbjct: 61 ELLWYLSGEEHIRTL-REETKIWDAWADDEGHLDTAYGRFWRRFPVPDEPARLPGESWPD 119 Query: 104 -----------YDGN---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 DG V DQ++ ++ +L +P+SRR +V+AW+ A LPPCH Sbjct: 120 DSHRWTTTETTPDGTERQVFDQLAYVLDTLEENPHSRRLVVNAWHPANAAVSTLPPCHYT 179 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 F F V +L+ L QRSGD+ LG+PFN+A+YSLL +A+ F+ G F HT+ D H+Y Sbjct: 180 FVFNVQGDQLNVHLTQRSGDIALGVPFNLAAYSLLAHAVANRTAFEVGSFGHTIVDAHIY 239 Query: 210 ------------------------NNHFEQADL--------------------------Q 219 ++ E D+ Q Sbjct: 240 CGAGDRGAWYADKLPALQDRLNDIDDREEYVDVREWLESEAPAEADDEGGLDHVPGLLTQ 299 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 LSRSPR P++ + +D L Y+D L Y+P I V+ Sbjct: 300 LSRSPRDRPEIEVADRPLDDL--EYDDVQLHDYDPAPGISFSVA 341 >gi|161610422|gb|ABX74967.1| thymidylate synthase-like protein [Retroperitoneal fibromatosis-associated herpesvirus] Length = 170 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 84/156 (53%), Positives = 107/156 (68%) Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ++ I+ ++ P RR ++SAWN I KMALPPCH L QFYV G+LSCQ Sbjct: 9 DYSGRGVDQLAYILDLIKNHPCDRRMVMSAWNPVDIPKMALPPCHVLCQFYVSAGELSCQ 68 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + GE IH LGD H+Y NH E +QLSR Sbjct: 69 LYQRSGDMGLGVPFNIASYALLTYMIAHVSGLKPGELIHVLGDAHIYKNHIEAVKVQLSR 128 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 PR P++ I + + F +DF+L Y+PH AI Sbjct: 129 EPRPFPRLHIVRTVSSIEDFTVDDFSLEGYDPHPAI 164 >gi|284164961|ref|YP_003403240.1| thymidylate synthase [Haloterrigena turkmenica DSM 5511] gi|284014616|gb|ADB60567.1| thymidylate synthase [Haloterrigena turkmenica DSM 5511] Length = 338 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 117/340 (34%), Positives = 161/340 (47%), Gaps = 80/340 (23%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYL+L+ V+ G+ + +RTGV T S+F DL G+PLLTTK++ W S++H Sbjct: 1 MRQYLELVDTVLSEGTYKPNRTGVDTISSFSEHYEVDLQDGYPLLTTKQMDGYRWNSMLH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103 E+ W+L G+ ++ L R IWD WAD +G L YG WR SWPD Sbjct: 61 EVCWYLSGEEHIRDL-REETKIWDAWADDEGRLDTAYGRFWRRFPIPEDDAQLEGESWPD 119 Query: 104 Y---------DGN-VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 DG DQ+ ++ +L P SRR +V+AW+ A LPPCH F F Sbjct: 120 ETHQWVTEEADGRRTFDQLQYVIDTLSDSPNSRRLVVNAWHPANAAVSTLPPCHYSFVFN 179 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY---- 209 +L+C L QRSGD LGIPFNIA+Y+LLT ++A GF+ G F HT+ D H+Y Sbjct: 180 AQGDRLNCHLTQRSGDTALGIPFNIAAYALLTKVIAQQTGFKPGTFAHTVVDTHVYCGRG 239 Query: 210 -----------------NNHFEQADL-----------------------------QLSRS 223 N+ ++ D QLSR Sbjct: 240 DRGEWYADNLETLQSRLNDVEDREDYLEVKSWLESAAPDEAEGDERLDHVPGLLEQLSRE 299 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P P + + +D L+ YED L++YE H I V+ Sbjct: 300 PLERPTLEVADVSIDELA--YEDVELKNYESHEGIEFAVA 337 >gi|289812599|ref|ZP_06543228.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 144 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 84/143 (58%), Positives = 102/143 (71%) Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 2 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 61 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 62 ALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFD 121 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 122 YRFDDFEIEGYDPHPGIKAPVAI 144 >gi|229138943|ref|ZP_04267522.1| Thymidylate synthase [Bacillus cereus BDRD-ST26] gi|228644568|gb|EEL00821.1| Thymidylate synthase [Bacillus cereus BDRD-ST26] Length = 124 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 77/124 (62%), Positives = 96/124 (77%) Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A G + GEF+ Sbjct: 1 MALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFV 60 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260 HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Y+PH AI A Sbjct: 61 HTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKA 120 Query: 261 KVSV 264 V+V Sbjct: 121 PVAV 124 >gi|325275840|ref|ZP_08141701.1| thymidylate synthase [Pseudomonas sp. TJI-51] gi|324099024|gb|EGB97009.1| thymidylate synthase [Pseudomonas sp. TJI-51] Length = 306 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 59/304 (19%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ FLRG N G + Sbjct: 3 NRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMVGFLRGVKNAGEFRELGCKV 62 Query: 80 WDEWADKDGE------------LGPIYGVQWRSWPDY----------------------- 104 WD+ A+++ + LG IYGVQWR WP Y Sbjct: 63 WDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIPLGNPAAIAMAEQAGFRRIA 122 Query: 105 ----DG-------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 DG IDQ+ + ++ DP SRR + WN A +D+MALPPCH L+QF+ Sbjct: 123 QDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWNCAQLDEMALPPCHLLYQFH 182 Query: 154 --VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 V+ ++S LY RS D+ LG PFN+ + L + + G+ F + +GD H+Y N Sbjct: 183 PNVETREISLTLYIRSNDLGLGTPFNLTEGAALLALFGRLTGYTPRWFTYFIGDAHVYEN 242 Query: 212 HFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE--------DFTLRSYEPHAAILA 260 H + + QL R P P+++I+ P + + E DF L YE HA + A Sbjct: 243 HLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEKIEPSDFWLEGYEHHAPMTA 302 Query: 261 KVSV 264 ++V Sbjct: 303 PMAV 306 >gi|289803171|ref|ZP_06533800.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 130 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 76/130 (58%), Positives = 106/130 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIV 130 DP SRR IV Sbjct: 121 NDPDSRRIIV 130 >gi|6707737|sp|O30397|TYSY1_BACAM RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1; AltName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|2293412|gb|AAC26326.1| thimidylate synthase [Bacillus amyloliquefaciens] Length = 230 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 91/231 (39%), Positives = 137/231 (59%), Gaps = 3/231 (1%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIY 94 FD S+ P+LTTKK+ WK+ + ELLW + SN V+ L++ V IWD+W +DG +G Y Sbjct: 1 FDNSE-VPILTTKKLAWKTAIKELLWIWQLKSNDVNDLNKMSVHIWDQWKQEDGTIGHAY 59 Query: 95 GVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 G Q + +G +DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+Y Sbjct: 60 GFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWY 119 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V +GKL ++ RS D+ LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H Sbjct: 120 VKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHI 179 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +Q+ R P++ INP + D F +DF L +Y+ +L +V V Sbjct: 180 DNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVPV 230 >gi|6686055|sp|O30394|TYSY_BACAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|2293406|gb|AAC26323.1| thymidylate synthase [Bacillus atrophaeus] Length = 227 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 88/224 (39%), Positives = 133/224 (59%), Gaps = 2/224 (0%) Query: 43 PLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RS 100 P+LTTKK+ WK+ + ELLW + SN V+ L++ V IWD+W +DG +G YG Q + Sbjct: 4 PILTTKKLAWKTAIKELLWIWQLKSNDVNDLNKMSVHIWDQWKQEDGTIGHAYGFQLGKK 63 Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +G +DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+YV +GKL Sbjct: 64 NRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLH 123 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 ++ RS D+ LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ Sbjct: 124 LEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQM 183 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ INP + D F +DF L +Y+ +L +V V Sbjct: 184 EREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVRV 227 >gi|213416590|ref|ZP_03349734.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 142 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/142 (58%), Positives = 101/142 (71%) Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 1 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 60 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L + Sbjct: 61 LLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDY 120 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R++DF + Y+PH I A V++ Sbjct: 121 RFDDFEIEGYDPHPGIKAPVAI 142 >gi|324514855|gb|ADY46009.1| Thymidylate synthase [Ascaris suum] Length = 195 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 91/191 (47%), Positives = 122/191 (63%), Gaps = 21/191 (10%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 +YL ++H+I G DRTGVGT S FG + L G PLLTTK+V+WK VV ELLW Sbjct: 4 KYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101 F++GD++ L GV IWD E+ D +G+LGPIYG QWR + Sbjct: 64 FIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYHGTD 123 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ +++ ++ +P SRR I++AWNV + +MALPPCH L QF V NG+LSC Sbjct: 124 ADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVRNGELSC 183 Query: 162 QLYQRSGDVFL 172 QLYQRSGD+ + Sbjct: 184 QLYQRSGDMVI 194 >gi|119622122|gb|EAX01717.1| thymidylate synthetase, isoform CRA_b [Homo sapiens] Length = 165 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 80/162 (49%), Positives = 109/162 (67%) Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 4 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 63 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 64 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 123 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 124 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 165 >gi|254252890|ref|ZP_04946208.1| Thymidylate synthase [Burkholderia dolosa AUO158] gi|124895499|gb|EAY69379.1| Thymidylate synthase [Burkholderia dolosa AUO158] Length = 323 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 158/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQEGFPAVTTKKLAFKSAIGELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + K +S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P+++I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLVIADRVPDYAKTGVYGPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|110668372|ref|YP_658183.1| thymidylate synthase [Haloquadratum walsbyi DSM 16790] gi|109626119|emb|CAJ52571.1| thymidylate synthase [Haloquadratum walsbyi DSM 16790] Length = 336 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 113/338 (33%), Positives = 155/338 (45%), Gaps = 78/338 (23%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 MHQY DL+ V++ G + +RTGV T S+F +L GFPLLTTK + W S++ Sbjct: 1 MHQYRDLVTAVLRSGEHKPNRTGVDTISSFSQHYTINLRDGFPLLTTKDLSGSRWHSLLS 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102 E +W+L G+ ++ L R SIWD WAD DG L YG WR +P Sbjct: 61 EFVWYLSGEEHIRSL-REETSIWDAWADDDGRLETAYGRFWRRYPVPSTDSQLPGEAWPV 119 Query: 103 -----DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 D DQ++ ++ L+ +P SRR ++SAW+ A LPPCH F F V N Sbjct: 120 DDHRWRNDDGTFDQLAYAIEQLQENPQSRRIVISAWHPANAAISTLPPCHYTFVFNVQNN 179 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY-------- 209 +L+ L QRSGD+ LG+PFNIA+YSLL ++A G F H++ D H+Y Sbjct: 180 RLNVHLTQRSGDIALGVPFNIAAYSLLATVIAQQTELTPGTFAHSIVDAHIYCGMGDRGA 239 Query: 210 -----------NNHFEQAD---------------------------------LQLSRSPR 225 N E D Q +RSPR Sbjct: 240 WYGEGETLDSLRNRLEAVDNPSEYRDVRSWLLESAPSEPANQSGYDHIPGLLEQCARSPR 299 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 + PQ+ I+ V L E+ L Y+P AI V+ Sbjct: 300 SKPQVAIDD--VSLDDIGVENIHLSGYDPAPAIRFAVA 335 >gi|167570744|ref|ZP_02363618.1| thymidylate synthase [Burkholderia oklahomensis C6786] Length = 323 Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 106/323 (32%), Positives = 161/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDAGTWQNNRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRAKRSAADFRALGCKVWDANANENAQWLANPYRRGEDDLGDVYGVQWRCWPGYKVLD 120 Query: 105 ---DGNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 D + IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRVVARFEEGGARKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245 G+ F + +GD H+Y N + QL R P P++ I + D + +YE Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLEIAERVPDCAKTGQYEPEWLER 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|6681717|gb|AAF23264.1|AF124982_1 thymidylate synthase [Haloferax volcanii] Length = 342 Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 112/330 (33%), Positives = 157/330 (47%), Gaps = 74/330 (22%) Query: 5 LDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVHELLW 61 DL+ V G + +RTGV T S F DL +GFPLLTTK + W S++HELLW Sbjct: 15 FDLVTDVFGTGRHKPNRTGVDTISGFSKHYTVDLQEGFPLLTTKDLSGFRWNSLIHELLW 74 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR------------SWPD------ 103 + G+ ++ L R IWD WAD++G L YG WR +WPD Sbjct: 75 YFSGEEHIRTL-REETGIWDAWADEEGHLDTAYGRFWRRYPVPEEGLAGEAWPDDGHRWM 133 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 D DQ++ ++ +L +P SRR +++AW+ A LPPCH F F V +L+ L Sbjct: 134 NDEGTFDQLAYVLDTLDENPNSRRLVINAWHPANAAVSTLPPCHYTFVFNVQGDELNLHL 193 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL----------YNNHF 213 QRSGD+ LG+PFN+A+Y++L ++A GF+ G F HT+ D H+ Y +H Sbjct: 194 TQRSGDIALGVPFNLAAYAILAQVVAQRAGFELGSFAHTIVDAHVYCGAGERGAWYGDHL 253 Query: 214 ----------------------------EQAD------------LQLSRSPRTLPQMIIN 233 E+AD LQ SR PR P + + Sbjct: 254 DELQSRLADVQSPDEYLDVREWLLDAAPEEADGEEDYDHVPGLLLQASREPRERPALDVA 313 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 ++ LSF ED LR Y+P I V+ Sbjct: 314 DVPLEDLSF--EDIVLRDYDPADGIRFAVA 341 >gi|161610414|gb|ABX74962.1| thymidylate synthase-like protein [Retroperitoneal fibromatosis-associated herpesvirus] Length = 170 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 80/162 (49%), Positives = 109/162 (67%) Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ++ ++ ++ +P RR ++SAWN KMALPPCH L QFYV G+LSCQ Sbjct: 9 DYSGRGVDQLAYLINLIKNNPCDRRMVMSAWNPVDTPKMALPPCHVLCQFYVAAGELSCQ 68 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+ IH LGD H+Y H + +QLSR Sbjct: 69 LYQRSGDMGLGVPFNIASYALLTYMIAHVCGLRPGDLIHVLGDAHIYKTHLDAVKVQLSR 128 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I ++ + F +DF+L Y PH AI ++V Sbjct: 129 EPRPFPRLNIVRSVASIEEFTADDFSLDGYNPHPAIRMDMAV 170 >gi|115351015|ref|YP_772854.1| thymidylate synthase [Burkholderia ambifaria AMMD] gi|115281003|gb|ABI86520.1| thymidylate synthase [Burkholderia ambifaria AMMD] Length = 323 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+ + + LG IYGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDIYGVQWRQWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|310831492|ref|YP_003970135.1| putative bifunctional dihydrofolate reductase/thymidylate synthase [Cafeteria roenbergensis virus BV-PW1] gi|309386676|gb|ADO67536.1| putative bifunctional dihydrofolate reductase/thymidylate synthase [Cafeteria roenbergensis virus BV-PW1] Length = 452 Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 104/284 (36%), Positives = 153/284 (53%), Gaps = 26/284 (9%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL LL ++ G R+ R T S F + FD+ GFPLLTTKK+ WK +V ELL+F Sbjct: 169 KYLHLLSKILNEGEFRQTRNA-NTWSLFNQNLEFDMKDGFPLLTTKKMFWKGIVEELLFF 227 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD-----------GELGPIYGVQWRSW--------PD 103 +RG +N L GV+IW KD G++G IYG WR + + Sbjct: 228 IRGHTNSKLLEEKGVNIWKGNTSKDFITKLGLPYEEGDMGKIYGFNWRHFGADYINCNTN 287 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL-FQFYV-DNGKLSC 161 Y G DQ+ I++ ++ +P SRR ++S ++ A + L PCH L QFYV D L Sbjct: 288 YTGKGFDQLVKIIEEIKTNPSSRRILMSDFDPATSHQGVLYPCHSLVLQFYVRDEDILDV 347 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 ++YQRS D FLG+PFNI+S SLL +++ + G+ +LGD H+Y H +Q QL Sbjct: 348 KMYQRSVDSFLGLPFNISSTSLLLHIISKLTNKTPGKVSLSLGDCHIYETHRDQVIRQLK 407 Query: 222 RSPRTLPQMIINPNIVDLLSFR---YEDFTLRSYEPHAAILAKV 262 R P P++I+ P+ L E++ + +Y H I A++ Sbjct: 408 RLPYNFPKLIL-PDFTSLDQVENSTLENYVIENYLHHKGIKAEM 450 >gi|167563581|ref|ZP_02356497.1| thymidylate synthase [Burkholderia oklahomensis EO147] Length = 323 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/323 (32%), Positives = 161/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDAGTWQNNRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRAKRSAADFRALGCKVWDANANENAQWLANPYRRGEDDLGDVYGVQWRRWPGYKVLD 120 Query: 105 ----------------------DG--------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 +G IDQ+ + ++ DP SRR + WN Sbjct: 121 AQADAQIADATSRGFRVVARFEEGGARKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245 G+ F + +GD H+Y N + QL R P P++ I + D + +YE Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLEIAERVPDCAKTGQYEPEWLER 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|170700986|ref|ZP_02891968.1| Thymidylate synthase [Burkholderia ambifaria IOP40-10] gi|170134126|gb|EDT02472.1| Thymidylate synthase [Burkholderia ambifaria IOP40-10] Length = 323 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+ + + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRVVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|206561247|ref|YP_002232012.1| thymidylate synthase [Burkholderia cenocepacia J2315] gi|198037289|emb|CAR53211.1| putative thymidylate synthase [Burkholderia cenocepacia J2315] Length = 323 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ GS + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGSWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + K +S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|238026573|ref|YP_002910804.1| thymidylate synthase [Burkholderia glumae BGR1] gi|237875767|gb|ACR28100.1| Thymidylate synthase [Burkholderia glumae BGR1] Length = 323 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/323 (32%), Positives = 154/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ GS + +RTGV T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGSWQENRTGVRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANENAAWLANPYRTGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AQATAQLEDALARGYRIVTRFDEAGAQKLLLHKAIDQLRDCLDTIMRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 ++++ALP CH L+QF + K +S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PVKLEEIALPACHLLYQFLPNLAKREISLCLYIRSNDVGLGTPFNLAEGAALLELVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+Q F + +GD H+Y N + QL R P P++ I + D L Sbjct: 241 GYQPRWFSYFIGDAHIYENQLDMLRQQLEREPYESPRLEIAERVPDYAKTGVYAPEWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y HA + A ++V Sbjct: 301 IEPADFTLAGYRHHAPLSAPMAV 323 >gi|83720929|ref|YP_442217.1| thymidylate synthase [Burkholderia thailandensis E264] gi|167581100|ref|ZP_02373974.1| thymidylate synthase [Burkholderia thailandensis TXDOH] gi|167619181|ref|ZP_02387812.1| thymidylate synthase [Burkholderia thailandensis Bt4] gi|257138410|ref|ZP_05586672.1| thymidylate synthase [Burkholderia thailandensis E264] gi|83654754|gb|ABC38817.1| thymidylate synthase [Burkholderia thailandensis E264] Length = 323 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/323 (32%), Positives = 160/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAAEFRALGCKVWDANANENAQWLANPYRRGADDLGDVYGVQWRRWPGYKVLD 120 Query: 105 ---DGNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 D + IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRIVARFEEGGADKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245 G+ F + +GD H+Y N + QL R P P++ + + D + +YE Sbjct: 241 GYSPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLELAERVPDYAKTGKYEPQWLER 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 VEPSDFTLVGYRHHEPLSAPMAV 323 >gi|186475553|ref|YP_001857023.1| thymidylate synthase [Burkholderia phymatum STM815] gi|184192012|gb|ACC69977.1| Thymidylate synthase [Burkholderia phymatum STM815] Length = 323 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ GS + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGSWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYREGPDDLGDVYGVQWRRWPAYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ +P RR + AWN Sbjct: 121 ATASAQLEDAASRGYAPVTEFEEDGMRKVLLYKAIDQLRQCLDAIMHNPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A+++++ALP CH L+QF + K +S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLEEIALPACHLLYQFLPNASKREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P PQ I+ + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTRDPYESPQFAISERVPDYTKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A +++ Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAI 323 >gi|307730580|ref|YP_003907804.1| thymidylate synthase [Burkholderia sp. CCGE1003] gi|307585115|gb|ADN58513.1| thymidylate synthase [Burkholderia sp. CCGE1003] Length = 323 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/323 (32%), Positives = 159/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLD 120 Query: 105 ---------------------DGN---------VIDQISSIVQSLRADPYSRRHIVSAWN 134 D N IDQ+ + ++ +P RR + AWN Sbjct: 121 ASASAQLADASARGFQVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ ++L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARREISLCLYIRSNDVGLGTPFNLTEGAVLLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 GF F + +GD H+Y N + + QL+R P P + I+ + + L Sbjct: 241 GFTPRWFTYFIGDAHIYENQLDMLNQQLTREPYESPTLAISERVPEYAKTGVYAPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|330815938|ref|YP_004359643.1| Thymidylate synthase [Burkholderia gladioli BSR3] gi|327368331|gb|AEA59687.1| Thymidylate synthase [Burkholderia gladioli BSR3] Length = 323 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 155/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRSILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+ + +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANDNAAWLANPYRTGLDDLGDVYGVQWRRWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 +G IDQ+ + ++ DP SRR + WN Sbjct: 121 AQATGQLEDALARGYRIVTRFEEEGVQQVLLYKAIDQLRDCLDTIMRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 +D++ALP CH L+QF + ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PVKLDEIALPACHLLYQFLPNPVTREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N E + QL R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLEMLNQQLEREPYESPRLAIADRVPDYAKTGVYEPEWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y HA + A ++V Sbjct: 301 IEPADFSLEGYRHHAPLTAPMAV 323 >gi|325522963|gb|EGD01399.1| thymidylate synthase [Burkholderia sp. TJI49] Length = 323 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIIENPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + K +S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNAAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|161525388|ref|YP_001580400.1| thymidylate synthase [Burkholderia multivorans ATCC 17616] gi|189349875|ref|YP_001945503.1| thymidylate synthase [Burkholderia multivorans ATCC 17616] gi|221201301|ref|ZP_03574341.1| thymidylate synthase [Burkholderia multivorans CGD2M] gi|221206245|ref|ZP_03579258.1| thymidylate synthase [Burkholderia multivorans CGD2] gi|221213524|ref|ZP_03586498.1| thymidylate synthase [Burkholderia multivorans CGD1] gi|160342817|gb|ABX15903.1| Thymidylate synthase [Burkholderia multivorans ATCC 17616] gi|189333897|dbj|BAG42967.1| thymidylate synthase [Burkholderia multivorans ATCC 17616] gi|221166313|gb|EED98785.1| thymidylate synthase [Burkholderia multivorans CGD1] gi|221173554|gb|EEE05988.1| thymidylate synthase [Burkholderia multivorans CGD2] gi|221179151|gb|EEE11558.1| thymidylate synthase [Burkholderia multivorans CGD2M] Length = 323 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AHADAQLADAQRRGFRIVTRFDEDGAQKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + K +S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P+++I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPRLVIADRVPEYAKTGVYEPEWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|167586578|ref|ZP_02378966.1| Thymidylate synthase [Burkholderia ubonensis Bu] Length = 323 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPHRQGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 AGADAQIADATGRGFRIVARFDEDGAPKVLLYKAIDQLRECLDTIMQDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + K +S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + + L Sbjct: 241 GYTPRWFTYFVGDAHIYENQLDMLQQQLAREPYESPRLAIADRVPEYAQTGVYAPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|213025197|ref|ZP_03339644.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 151 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 73/119 (61%), Positives = 97/119 (81%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+ Sbjct: 1 MRFNLLEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60 Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 YG QWR+WP DG IDQI++++ L+ DP SRR IVSAWNV +DKMAL PCH F Sbjct: 61 YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFSSF 119 >gi|295677229|ref|YP_003605753.1| thymidylate synthase [Burkholderia sp. CCGE1002] gi|295437072|gb|ADG16242.1| thymidylate synthase [Burkholderia sp. CCGE1002] Length = 323 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 158/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRELGCKVWDGNANQNAQWLANPYREGPDDLGDVYGVQWRKWPAYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ +P RR + AWN Sbjct: 121 ASASAQLADAQARGFRVITQFDEDGRSKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTRREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P++ I+ + D L Sbjct: 241 GYTPRWFSYFIGDAHIYENQLDMLQQQLKREPYESPRLAISDRVPDYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y+ H + A +++ Sbjct: 301 IEPADFSLVGYQHHEPLTAPMAI 323 >gi|171317124|ref|ZP_02906326.1| Thymidylate synthase [Burkholderia ambifaria MEX-5] gi|171097691|gb|EDT42521.1| Thymidylate synthase [Burkholderia ambifaria MEX-5] Length = 323 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+ + + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 105 ---DGNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 D + IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRVVTHFDEGGASKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|172060020|ref|YP_001807672.1| thymidylate synthase [Burkholderia ambifaria MC40-6] gi|171992537|gb|ACB63456.1| Thymidylate synthase [Burkholderia ambifaria MC40-6] Length = 323 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+ + + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 105 ---DGNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 D + IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDCAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|107022163|ref|YP_620490.1| thymidylate synthase [Burkholderia cenocepacia AU 1054] gi|116689108|ref|YP_834731.1| thymidylate synthase [Burkholderia cenocepacia HI2424] gi|170732396|ref|YP_001764343.1| thymidylate synthase [Burkholderia cenocepacia MC0-3] gi|254245954|ref|ZP_04939275.1| Thymidylate synthase [Burkholderia cenocepacia PC184] gi|105892352|gb|ABF75517.1| thymidylate synthase [Burkholderia cenocepacia AU 1054] gi|116647197|gb|ABK07838.1| thymidylate synthase [Burkholderia cenocepacia HI2424] gi|124870730|gb|EAY62446.1| Thymidylate synthase [Burkholderia cenocepacia PC184] gi|169815638|gb|ACA90221.1| Thymidylate synthase [Burkholderia cenocepacia MC0-3] Length = 323 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---D 105 FLR + + G +WD A+++ + LG +YGVQWR WP Y D Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 106 GNV-------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 N IDQ+ + ++ +P RR + AWN Sbjct: 121 ANADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + K +S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPEYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|78065671|ref|YP_368440.1| thymidylate synthase [Burkholderia sp. 383] gi|77966416|gb|ABB07796.1| thymidylate synthase [Burkholderia sp. 383] Length = 323 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + K +S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLELVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEIAERVPEYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|53720080|ref|YP_109066.1| thymidylate synthase [Burkholderia pseudomallei K96243] gi|53724744|ref|YP_102198.1| thymidylate synthase [Burkholderia mallei ATCC 23344] gi|67642871|ref|ZP_00441622.1| thymidylate synthase [Burkholderia mallei GB8 horse 4] gi|76811492|ref|YP_334325.1| thymidylate synthase [Burkholderia pseudomallei 1710b] gi|121599317|ref|YP_993825.1| thymidylate synthase [Burkholderia mallei SAVP1] gi|124384034|ref|YP_001026887.1| thymidylate synthase [Burkholderia mallei NCTC 10229] gi|126450390|ref|YP_001079826.1| thymidylate synthase [Burkholderia mallei NCTC 10247] gi|126454374|ref|YP_001067140.1| thymidylate synthase [Burkholderia pseudomallei 1106a] gi|167002756|ref|ZP_02268546.1| thymidylate synthase [Burkholderia mallei PRL-20] gi|167739605|ref|ZP_02412379.1| thymidylate synthase [Burkholderia pseudomallei 14] gi|167816807|ref|ZP_02448487.1| thymidylate synthase [Burkholderia pseudomallei 91] gi|167825213|ref|ZP_02456684.1| thymidylate synthase [Burkholderia pseudomallei 9] gi|167846713|ref|ZP_02472221.1| thymidylate synthase [Burkholderia pseudomallei B7210] gi|167903685|ref|ZP_02490890.1| thymidylate synthase [Burkholderia pseudomallei NCTC 13177] gi|167911934|ref|ZP_02499025.1| thymidylate synthase [Burkholderia pseudomallei 112] gi|217421016|ref|ZP_03452521.1| thymidylate synthase [Burkholderia pseudomallei 576] gi|237813246|ref|YP_002897697.1| thymidylate synthase [Burkholderia pseudomallei MSHR346] gi|242317181|ref|ZP_04816197.1| thymidylate synthase [Burkholderia pseudomallei 1106b] gi|254177043|ref|ZP_04883700.1| thymidylate synthase [Burkholderia mallei ATCC 10399] gi|254181135|ref|ZP_04887733.1| thymidylate synthase [Burkholderia pseudomallei 1655] gi|254191996|ref|ZP_04898496.1| thymidylate synthase [Burkholderia pseudomallei Pasteur 52237] gi|254195598|ref|ZP_04902025.1| thymidylate synthase [Burkholderia pseudomallei S13] gi|254203878|ref|ZP_04910238.1| thymidylate synthase [Burkholderia mallei FMH] gi|254208859|ref|ZP_04915207.1| thymidylate synthase [Burkholderia mallei JHU] gi|254259968|ref|ZP_04951022.1| thymidylate synthase [Burkholderia pseudomallei 1710a] gi|254295668|ref|ZP_04963126.1| thymidylate synthase [Burkholderia pseudomallei 406e] gi|254360085|ref|ZP_04976355.1| thymidylate synthase [Burkholderia mallei 2002721280] gi|52210494|emb|CAH36477.1| putative thymidylate synthase [Burkholderia pseudomallei K96243] gi|52428167|gb|AAU48760.1| thymidylate synthase [Burkholderia mallei ATCC 23344] gi|76580945|gb|ABA50420.1| thymidylate synthase [Burkholderia pseudomallei 1710b] gi|121228127|gb|ABM50645.1| thymidylate synthase [Burkholderia mallei SAVP1] gi|124292054|gb|ABN01323.1| thymidylate synthase [Burkholderia mallei NCTC 10229] gi|126228016|gb|ABN91556.1| thymidylate synthase [Burkholderia pseudomallei 1106a] gi|126243260|gb|ABO06353.1| thymidylate synthase [Burkholderia mallei NCTC 10247] gi|147745390|gb|EDK52470.1| thymidylate synthase [Burkholderia mallei FMH] gi|147750735|gb|EDK57804.1| thymidylate synthase [Burkholderia mallei JHU] gi|148029325|gb|EDK87230.1| thymidylate synthase [Burkholderia mallei 2002721280] gi|157805557|gb|EDO82727.1| thymidylate synthase [Burkholderia pseudomallei 406e] gi|157987818|gb|EDO95583.1| thymidylate synthase [Burkholderia pseudomallei Pasteur 52237] gi|160698084|gb|EDP88054.1| thymidylate synthase [Burkholderia mallei ATCC 10399] gi|169652344|gb|EDS85037.1| thymidylate synthase [Burkholderia pseudomallei S13] gi|184211674|gb|EDU08717.1| thymidylate synthase [Burkholderia pseudomallei 1655] gi|217396428|gb|EEC36445.1| thymidylate synthase [Burkholderia pseudomallei 576] gi|237504707|gb|ACQ97025.1| thymidylate synthase [Burkholderia pseudomallei MSHR346] gi|238524079|gb|EEP87514.1| thymidylate synthase [Burkholderia mallei GB8 horse 4] gi|242140420|gb|EES26822.1| thymidylate synthase [Burkholderia pseudomallei 1106b] gi|243061578|gb|EES43764.1| thymidylate synthase [Burkholderia mallei PRL-20] gi|254218657|gb|EET08041.1| thymidylate synthase [Burkholderia pseudomallei 1710a] Length = 323 Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGAQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N QL R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323 >gi|222480576|ref|YP_002566813.1| thymidylate synthase [Halorubrum lacusprofundi ATCC 49239] gi|222453478|gb|ACM57743.1| thymidylate synthase [Halorubrum lacusprofundi ATCC 49239] Length = 342 Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 135/240 (56%), Gaps = 32/240 (13%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYLDL+ + G+ + +RTGV T +TF Q DLS+GFPLLTTKK+ W S++H Sbjct: 1 MQQYLDLVDDTLSTGTYKPNRTGVDTIATFSGQYTVDLSEGFPLLTTKKMDGYRWNSLIH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----------- 106 E+LW+L G+ ++ L R IWD WAD +G L YG WR +P DG Sbjct: 61 EVLWYLSGEEHIRDL-REETKIWDAWADDEGRLDTAYGRFWRRFPVPDGVDALPGETWPK 119 Query: 107 -----------------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 DQI ++ +L +P SRR +V+AW+ A LPPCH Sbjct: 120 DAHRWVTVEEGPEGVERRTFDQIQYVLDTLDENPRSRRMVVNAWHPANAAVSTLPPCHYT 179 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 F V +G+L+ L QRSGD+ LG+PFNIA+Y+LL LA GF+ GEF HT+ D H+Y Sbjct: 180 FVVNVQDGRLNLHLTQRSGDIALGVPFNIAAYALLANALAQRTGFEIGEFGHTVVDAHIY 239 >gi|126440677|ref|YP_001059852.1| thymidylate synthase [Burkholderia pseudomallei 668] gi|167720616|ref|ZP_02403852.1| thymidylate synthase [Burkholderia pseudomallei DM98] gi|126220170|gb|ABN83676.1| thymidylate synthase [Burkholderia pseudomallei 668] Length = 323 Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N QL R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323 >gi|134295116|ref|YP_001118851.1| thymidylate synthase [Burkholderia vietnamiensis G4] gi|134138273|gb|ABO54016.1| thymidylate synthase [Burkholderia vietnamiensis G4] Length = 323 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+ + + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRALGCKVWDANANDNAQWLANPYRRGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ +P RR + AWN Sbjct: 121 ASADAQIADATRRGFRIVTQFDEDGAPKVLLYKAIDQLRQCLDTIIENPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + K +S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNAAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYDSPRLEIAERVPDYAKTGVYAPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLSAPMAV 323 >gi|323526913|ref|YP_004229066.1| thymidylate synthase [Burkholderia sp. CCGE1001] gi|323383915|gb|ADX56006.1| thymidylate synthase [Burkholderia sp. CCGE1001] Length = 323 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLD 120 Query: 105 ---------------------DGN---------VIDQISSIVQSLRADPYSRRHIVSAWN 134 D N IDQ+ + ++ +P RR + AWN Sbjct: 121 AGAAAQLADASARGFRVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P + I+ + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLAREPYDSPTLAISDRVPDYAQTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLIGYRHHEPLTAPMAV 323 >gi|170696336|ref|ZP_02887466.1| Thymidylate synthase [Burkholderia graminis C4D1M] gi|170138742|gb|EDT06940.1| Thymidylate synthase [Burkholderia graminis C4D1M] Length = 323 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 106/323 (32%), Positives = 155/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ GS + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLDLVRTILDTGSWQENRTGIRTISMPGAVLRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLD 120 Query: 105 ---------------------DGN---------VIDQISSIVQSLRADPYSRRHIVSAWN 134 D N IDQ+ + ++ +P RR + AWN Sbjct: 121 AAASAQLADATARGFQVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N QL R P P + I+ + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLAMLQEQLKREPYESPTLAISDRVPDYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|182418738|ref|ZP_02950011.1| thymidylate synthase [Clostridium butyricum 5521] gi|237669671|ref|ZP_04529648.1| thymidylate synthase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377432|gb|EDT74988.1| thymidylate synthase [Clostridium butyricum 5521] gi|237654745|gb|EEP52308.1| thymidylate synthase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 263 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 95/265 (35%), Positives = 143/265 (53%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL + + +++ G +RTG+ T M+F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 KYLSIAKDILENGYYDNNRTGMPTYKLPHQIMQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V IWDEW +DG +G YG + +QI ++ +L+ Sbjct: 67 FKDQSNNVKDLQAQNVRIWDEWEMEDGTIGTSYGWVVKK--------FNQIDKLIDALKN 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ W +D AL PC + V +G+L+C L QRSGD+ LG+PFN + Y Sbjct: 119 NPQDRRMMLNLWQWEHLDGGALYPCCWATMWDVTDGRLNCMLIQRSGDLPLGVPFNTSQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVDL 239 ++L +LA V G + G F H + + H+Y N E QL+R P++ INP I + Sbjct: 179 AVLVHLLAQVTGLKPGLFTHVINNAHIYENQIEGMKTQLTRKDDAYDAPKLWINPEIKNF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ++ L Y+ H I VSV Sbjct: 239 YDFTPDNIKLIDYKHHETIKMPVSV 263 >gi|134276945|ref|ZP_01763660.1| thymidylate synthase [Burkholderia pseudomallei 305] gi|134250595|gb|EBA50674.1| thymidylate synthase [Burkholderia pseudomallei 305] Length = 323 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGAQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S L+ RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLFIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N QL R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323 >gi|167919927|ref|ZP_02507018.1| thymidylate synthase [Burkholderia pseudomallei BCC215] Length = 323 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 155/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N Q R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQFEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323 >gi|167895299|ref|ZP_02482701.1| thymidylate synthase [Burkholderia pseudomallei 7894] Length = 323 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 155/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGIDDLGDVYGVQWRRWPGYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N Q R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQFEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323 >gi|296158288|ref|ZP_06841120.1| thymidylate synthase [Burkholderia sp. Ch1-1] gi|295891624|gb|EFG71410.1| thymidylate synthase [Burkholderia sp. Ch1-1] Length = 323 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLN 120 Query: 105 -----------------------DGN-------VIDQISSIVQSLRADPYSRRHIVSAWN 134 DG+ IDQ+ + ++ +P RR + AWN Sbjct: 121 ADASAQLVDATARGFRVVTEFEEDGSRKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFVPNAVRKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P I+ + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPAFAISDRVPEYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPADFSLVGYRHHDPLTAPMAV 323 >gi|187924930|ref|YP_001896572.1| thymidylate synthase [Burkholderia phytofirmans PsJN] gi|187716124|gb|ACD17348.1| Thymidylate synthase [Burkholderia phytofirmans PsJN] Length = 323 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLD 120 Query: 105 -----------------------DGN-------VIDQISSIVQSLRADPYSRRHIVSAWN 134 DG+ IDQ+ + ++ +P RR + AWN Sbjct: 121 ANAGAQLADATARGFQVVTEFEEDGSNKILLYKAIDQLRQCLDTIMHNPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNAVTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P I+ + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPSFAISERVPEYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAV 323 >gi|91784762|ref|YP_559968.1| thymidylate synthase [Burkholderia xenovorans LB400] gi|91688716|gb|ABE31916.1| thymidylate synthase [Burkholderia xenovorans LB400] Length = 323 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 102/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ ++S V EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFRSAVGELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLN 120 Query: 105 -----------------------DGN-------VIDQISSIVQSLRADPYSRRHIVSAWN 134 DG+ IDQ+ + ++ +P RR + AWN Sbjct: 121 ADASAQLGDATARGFRVVTGFEEDGSRKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFVPNAVRKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P I+ + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPAFAISDRVPEYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAV 323 >gi|209522037|ref|ZP_03270694.1| Thymidylate synthase [Burkholderia sp. H160] gi|209497520|gb|EDZ97718.1| Thymidylate synthase [Burkholderia sp. H160] Length = 323 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDGNANQNAQWLANPYREGPDDLGDVYGVQWRKWPAYKVLD 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 +G IDQ+ + ++ +P RR + AWN Sbjct: 121 ASASAQLADAQARGFRVITQFDEEGRSKVLLYKAIDQLRQCLDTIIENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTRREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P++ I+ + + L Sbjct: 241 GYTPRWFSYFIGDAHIYENQLDMLHQQLKREPYESPRLAISDRVPEYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A +++ Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAI 323 >gi|323934213|gb|EGB30637.1| thymidylate synthase [Escherichia coli E1520] Length = 363 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 110/349 (31%), Positives = 160/349 (45%), Gaps = 88/349 (25%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 Y ++ V+K G DRTG GT ST + L+ G PL++ K V+ K ++ EL W+ Sbjct: 15 YAKVIETVLKSGVQADDRTGTGTLSTCYVPSYYMLTGGTVPLISGKAVNLKPLLVELEWY 74 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD------------------- 103 L+G N+ +L +GV IWD WAD++G+LGP+YG QWR W D Sbjct: 75 LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIATFRER 134 Query: 104 ------YDG---------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 Y G IDQ+ IV +LR +P RR +++AWNV ++ M LPPCH Sbjct: 135 GYKVEGYLGISEDRVVLSREIDQLQRIVDTLRTNPTDRRIMLNAWNVGELEDMKLPPCHF 194 Query: 149 LFQFY-------------------------------------VDNGKLSCQL-------- 163 +F + +D +L Sbjct: 195 VFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLYDLEMDGSVTEAELDELGIPKR 254 Query: 164 ------YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ-A 216 QRS D F+G+PFNIA Y +LT LA + G G F+H DVHLYNNH E Sbjct: 255 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYNNHMEGVC 314 Query: 217 DLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +L ++P ++I P+ +L F++++ + Y+P I V+V Sbjct: 315 ELMKRQAPEHSDPVVIFPHEWSELDDFKWDEVLILGYDPLPWIKVPVAV 363 >gi|293411959|ref|ZP_06654684.1| thymidylate synthase [Escherichia coli B354] gi|220980066|emb|CAP72258.1| Thymidylate synthase (EC 2.1.1.45) (TS) (TSase) [Escherichia coli LF82] gi|291469514|gb|EFF12003.1| thymidylate synthase [Escherichia coli B354] Length = 367 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 110/349 (31%), Positives = 160/349 (45%), Gaps = 88/349 (25%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 Y ++ V+K G DRTG GT ST + L+ G PL++ K V+ K ++ EL W+ Sbjct: 19 YAKVIETVLKSGVQADDRTGTGTLSTCYVPSYYMLTGGTVPLISGKAVNLKPLLVELEWY 78 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD------------------- 103 L+G N+ +L +GV IWD WAD++G+LGP+YG QWR W D Sbjct: 79 LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIATFRER 138 Query: 104 ------YDG---------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 Y G IDQ+ IV +LR +P RR +++AWNV ++ M LPPCH Sbjct: 139 GYKVEGYLGISEDRVVLSREIDQLQRIVDTLRTNPTDRRIMLNAWNVGELEDMKLPPCHF 198 Query: 149 LFQFY-------------------------------------VDNGKLSCQL-------- 163 +F + +D +L Sbjct: 199 VFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLYDLEMDGSVTEAELDELGIPKR 258 Query: 164 ------YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ-A 216 QRS D F+G+PFNIA Y +LT LA + G G F+H DVHLYNNH E Sbjct: 259 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYNNHMEGVC 318 Query: 217 DLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +L ++P ++I P+ +L F++++ + Y+P I V+V Sbjct: 319 ELMKRQAPEHSDPVVIFPHEWSELDDFKWDEVLILGYDPLPWIKVPVAV 367 >gi|269975303|gb|ACZ55527.1| thymidylate synthase [Staphylococcus phage SA1] Length = 299 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 147/293 (50%), Gaps = 35/293 (11%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y ++L HV+ G R RTG + Q RFD+ GFPLLT+K+V + V+ E LWFL Sbjct: 8 YKNILNHVLSVGELRTTRTGDVISAFAPPQFRFDMRTGFPLLTSKQVFTRQVIGEALWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDE--------WADK----------------DGELGPIYGVQWR 99 G++ + L WDE W+D D G IYGVQWR Sbjct: 68 NGENKLGELRYR---TWDENDGERWTIWSDDFKRWLSSNYSSEQDWLDDAGGRIYGVQWR 124 Query: 100 SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDN- 156 ++ ++G V+DQ+ ++V ++ D R +V+AWN A I + MAL PCH LFQ Y+ N Sbjct: 125 NFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVLFQIYITNE 184 Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 G++ Q YQRS D FLG+PFNIASY + +L + G+ I GD +Y NH +Q Sbjct: 185 GEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQNHMKQV 244 Query: 217 DLQLSRSPRTLPQMIIN---PNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264 ++ P I + DL DF + +Y+ I A +SV Sbjct: 245 YELMNNEEFHAPTFEIGIPLNTLSDLKHLTASDFIGGINNYQHAGKIEAPLSV 297 >gi|15226577|ref|NP_179750.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative / DHFR-TS, putative [Arabidopsis thaliana] gi|4567234|gb|AAD23649.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|330252101|gb|AEC07195.1| bifunctional dihydrofolate reductase/thymidylate synthase [Arabidopsis thaliana] Length = 492 Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 95/263 (36%), Positives = 146/263 (55%), Gaps = 28/263 (10%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L++++I G D T S FG QMRF+L K FPLLTTKK+ W VV E+L + Sbjct: 238 YLNLVQNIISSG----DMNDNSTLSKFGCQMRFNLRKTFPLLTTKKIFWLGVVEEILQLI 293 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD--------KDGELGPIYGVQWRSWPDYDGNVI- 109 G +N +G IWD E+ D +DG+ ++G+ W+ D + Sbjct: 294 SGSNNP---KENGSHIWDTDEAKEYLDSFGVNATEEDGDNPFLHGLHWKHC---DARFVI 347 Query: 110 ---DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 Q+S ++ ++ +P+ +R +++A N L K+++ PCH QFYV NG++SCQ+YQ Sbjct: 348 QEFSQLSDVINKIKNNPHDQRIMLAACN-PLDFKLSVSPCHTFTQFYVANGEVSCQIYQS 406 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S + +GIPF+IA+YSLLT ++A V G+FIH +G ++ H + QL SP+ Sbjct: 407 STEASIGIPFSIATYSLLTCIIAHVCDLGAGDFIHVIGQAYINKAHVKAIQKQLQISPKP 466 Query: 227 LPQMIINPNIVDLLSFRYEDFTL 249 P + INP + +F D L Sbjct: 467 FPILKINPEKKKMDNFEASDLEL 489 >gi|38707853|ref|NP_944928.1| Thymidylate synthase [Enterobacteria phage Felix 01] gi|33340456|gb|AAQ14807.1| putative thymidylate synthase [Enterobacteria phage Felix 01] Length = 299 Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 147/296 (49%), Gaps = 41/296 (13%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y ++L HV+ G R RTG + Q RFD+ GFPLLT+K+V + V+ E LWFL Sbjct: 8 YKNILNHVLSVGELRTTRTGDVISAFAPPQFRFDMRTGFPLLTSKQVFTRQVIGEALWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGEL---------------------------GPIYGV 96 G++ +S L + W + DGE G IYGV Sbjct: 68 NGENKLSELR------YRTWGENDGERWTIWSDDFKRWLSSNYSSEQDWLEDAGGRIYGV 121 Query: 97 QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYV 154 QWR++ ++G V+DQ+ ++V ++ D R +V+AWN A I + MAL PCH +FQ Y+ Sbjct: 122 QWRNFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVMFQIYI 181 Query: 155 DN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 N G++ Q YQRS D FLG+PFNIASY + +L + G+ I GD +Y NH Sbjct: 182 TNEGEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQNHM 241 Query: 214 EQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264 +Q ++ P I + DL DF + +Y+ I A +SV Sbjct: 242 KQVYELMNNEEFHAPTFEIGLPLNTLSDLKHLTASDFIGGINNYKHAGKIEAPLSV 297 >gi|301768887|ref|XP_002919869.1| PREDICTED: LOW QUALITY PROTEIN: thymidylate synthase-like [Ailuropoda melanoleuca] Length = 358 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 97/283 (34%), Positives = 148/283 (52%), Gaps = 24/283 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 Q L ++H++ + + TG F Q + L + FPLLTT +V K V+ ELLWF Sbjct: 53 QCLGQIQHILHXRFQKDECTGTSMLWVF-MQAHYSLREEFPLLTTTRVFXKGVLEELLWF 111 Query: 63 LRGDSNVSY-LHRHGVSIWDEWADKD------------GELGPIYGVQWR----SWPDYD 105 ++G +N + L GV IWD A +D G+LGP YG QWR + D D Sbjct: 112 IKGSTNAKHSLSSKGVKIWDANASRDFLDSLGFSSGVEGDLGPGYGSQWRHLGAEYKDKD 171 Query: 106 ----GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 G+ +DQ+ + ++ P RR I+ WN + +AL PCH L G+ SC Sbjct: 172 AGDSGHGVDQLQKVFGTIETKPEDRRIILCGWNPKALPLLALLPCHALCXEL--RGEWSC 229 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLY+R+GD+ L +PFN+A + L ++A + G + G + TL D +Y NH E +QL Sbjct: 230 QLYRRAGDMGLAVPFNLACRTPLAYVIAHITGLKPGNLVRTLXDTRIYLNHVEPLKMQLQ 289 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R P++ I + + F+ EDF ++ Y PH I +++V Sbjct: 290 QETRPFPKLKILQKVEMIHDFKAEDFQIKGYNPHPTIKMEMAV 332 >gi|89512123|gb|ABD73958.1| dihydrofolate reductase [Plasmodium atheruri] gi|89512137|gb|ABD73965.1| dihydrofolate reductase [Plasmodium vinckei] gi|89512147|gb|ABD73970.1| dihydrofolate reductase [Plasmodium vinckei petteri] gi|89512149|gb|ABD73971.1| dihydrofolate reductase [Plasmodium vinckei petteri] Length = 172 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+LS+ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + DY +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +DKMALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDLDKMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|238801819|ref|YP_002922869.1| thymidylate synthase [Enterobacteria phage WV8] gi|216263032|gb|ACJ71900.1| thymidylate synthase [Enterobacteria phage WV8] Length = 299 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/296 (34%), Positives = 146/296 (49%), Gaps = 41/296 (13%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y ++L HV+ G R RTG + + RFD+ GFPLLT+K+V + V+ E LWFL Sbjct: 8 YKNILNHVLSVGELRTTRTGDVISAFAPPKFRFDMRTGFPLLTSKQVFTRQVIGEALWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGEL---------------------------GPIYGV 96 G++ + L + W + DGE G IYGV Sbjct: 68 NGENKLGELR------YRTWGENDGERWTIWSDDFKRWLSSNYSSEQDWLEDAGGRIYGV 121 Query: 97 QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYV 154 QWR++ ++G V+DQ+ ++V ++ D R +V+AWN A I + MAL PCH LFQ Y+ Sbjct: 122 QWRNFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVLFQIYI 181 Query: 155 DN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 N G++ Q YQRS D FLG+PFNIASY + +L + G+ I GD +Y NH Sbjct: 182 TNEGEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQNHM 241 Query: 214 EQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264 +Q ++ P I + DL DF + +Y+ I A +SV Sbjct: 242 KQVYELMNNEEFHAPTFEIGVQLNTLSDLKHLTASDFIGGINNYQHAGKIEAPLSV 297 >gi|89512143|gb|ABD73968.1| dihydrofolate reductase [Plasmodium vinckei lentum] Length = 172 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+LS+ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + DY +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 ID+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDIDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|89512139|gb|ABD73966.1| dihydrofolate reductase [Plasmodium vinckei vinckei] Length = 172 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+LS+ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + DY +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMYADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|18466784|ref|NP_569591.1| putative thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16506100|emb|CAD09986.1| putative thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] Length = 371 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 109/349 (31%), Positives = 156/349 (44%), Gaps = 88/349 (25%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 Y ++ V+ G DRTG GT+S + L+ G PL++ K V+ K ++ EL W+ Sbjct: 23 YAKVVETVLNSGVHAGDRTGTGTKSVSYVPSYYMLTGGSVPLISGKAVNLKPLLVELEWY 82 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD------------------- 103 L+G N+ +L +GV IWD WAD++G+LGP+YG QWR W D Sbjct: 83 LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIDTFRER 142 Query: 104 ------YDG---------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 Y G IDQ+ IV +LR +P RR +++AWNV ++ M LPPCH Sbjct: 143 GYKVEGYLGVSEDRVVLSREIDQLQRIVHTLRTNPTDRRILLNAWNVGELEDMKLPPCHF 202 Query: 149 LFQFY-------------VDNG-------------KLSCQL------------------- 163 +F + D G ++ C L Sbjct: 203 VFSLWSRKLDFETRLTMATDIGIQHNRHGHESIYTQMLCLLERDGGITENLLDELGIPKR 262 Query: 164 ------YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 QRS D F+G+PFNIA Y +LT LA + G G F+H DVHLY+NH + Sbjct: 263 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYDNHMGGVE 322 Query: 218 LQLSRSP--RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R P + P +I +L F++E + Y P I V+V Sbjct: 323 ELMKREPPKESDPVVIFPHEWAELDDFKWEGVQVCGYSPLPWIKVPVAV 371 >gi|89512129|gb|ABD73961.1| dihydrofolate reductase [Plasmodium chabaudi adami] gi|89512131|gb|ABD73962.1| dihydrofolate reductase [Plasmodium chabaudi adami] gi|89512133|gb|ABD73963.1| dihydrofolate reductase [Plasmodium chabaudi chabaudi] gi|89512135|gb|ABD73964.1| dihydrofolate reductase [Plasmodium chabaudi chabaudi] gi|89512141|gb|ABD73967.1| dihydrofolate reductase [Plasmodium vinckei brucechwatti] gi|89512145|gb|ABD73969.1| dihydrofolate reductase [Plasmodium vinckei lentum] Length = 172 Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+LS+ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + DY +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|125973742|ref|YP_001037652.1| thymidylate synthase [Clostridium thermocellum ATCC 27405] gi|256005544|ref|ZP_05430505.1| thymidylate synthase [Clostridium thermocellum DSM 2360] gi|281417898|ref|ZP_06248918.1| thymidylate synthase [Clostridium thermocellum JW20] gi|125713967|gb|ABN52459.1| thymidylate synthase [Clostridium thermocellum ATCC 27405] gi|255990524|gb|EEU00645.1| thymidylate synthase [Clostridium thermocellum DSM 2360] gi|281409300|gb|EFB39558.1| thymidylate synthase [Clostridium thermocellum JW20] gi|316940064|gb|ADU74098.1| thymidylate synthase [Clostridium thermocellum DSM 1313] Length = 276 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 125/235 (53%), Gaps = 4/235 (1%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVS 78 D T T FG R+DLS+ FP+LT + + K+ + ELLW + SN + L+ H Sbjct: 33 DGTPAHTIKKFGVVNRYDLSEEFPILTLRPTNLKAAIDELLWIWQKKSNNIKDLNSH--- 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD++G +G YG Q Y DQ+ I+ L+ +PYSRR I + +N + + Sbjct: 90 IWDSWADENGSIGKAYGYQLSIKHKYPEGEFDQVDRIIYDLKHNPYSRRIIANMYNHSDL 149 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 +M L PC F V KL+ L QRS DV + +N+A Y++L M A V + GE Sbjct: 150 HEMNLYPCAYSITFNVTGRKLNAILNQRSQDVLVANNWNVAQYAILVHMFAQVCDLEVGE 209 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 +H + D H+Y+ H + R+P P++ INP D F+ EDF L Y+ Sbjct: 210 LVHVIADAHIYDRHIPLVKELIQRTPYPAPKLWINPEKKDFYDFKVEDFVLEDYQ 264 >gi|254973707|ref|ZP_05270179.1| thymidylate synthase [Clostridium difficile QCD-66c26] gi|255091097|ref|ZP_05320575.1| thymidylate synthase [Clostridium difficile CIP 107932] gi|255312752|ref|ZP_05354335.1| thymidylate synthase [Clostridium difficile QCD-76w55] gi|255515512|ref|ZP_05383188.1| thymidylate synthase [Clostridium difficile QCD-97b34] gi|255648605|ref|ZP_05395507.1| thymidylate synthase [Clostridium difficile QCD-37x79] gi|260681823|ref|YP_003213108.1| thymidylate synthase [Clostridium difficile CD196] gi|260685420|ref|YP_003216553.1| thymidylate synthase [Clostridium difficile R20291] gi|306518729|ref|ZP_07405076.1| thymidylate synthase [Clostridium difficile QCD-32g58] gi|260207986|emb|CBA60142.1| thymidylate synthase [Clostridium difficile CD196] gi|260211436|emb|CBE01538.1| thymidylate synthase [Clostridium difficile R20291] Length = 276 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 82/228 (35%), Positives = 123/228 (53%), Gaps = 2/228 (0%) Query: 26 TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD 85 T F R+DLSK FP+LT + + K+ + ELLW + SN ++ IWD WAD Sbjct: 39 TIKKFCVVNRYDLSKEFPILTLRPTNLKAAIDELLWIWQKKSN--NINDLNSRIWDSWAD 96 Query: 86 KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 + G +G YG Q Y DQI ++ L+ +PYSRR I + +N +++M L P Sbjct: 97 ETGSIGKAYGYQIGQKHKYKEGEFDQIDRVIYDLKYNPYSRRIITNIYNHNDLNEMNLYP 156 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 C F V +L+ L QRS D+ + +N+ Y++L MLA + + GE +H + D Sbjct: 157 CAYSMTFNVTGNRLNAILNQRSNDILVANNWNVTQYAILVHMLAQISDLEVGELVHVIAD 216 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 H+Y+ H ++R P++IINPNI + FR EDFTL +Y+ Sbjct: 217 AHIYDRHIPLVKELINRESYDAPKLIINPNIKNFYDFRVEDFTLENYK 264 >gi|225568619|ref|ZP_03777644.1| hypothetical protein CLOHYLEM_04696 [Clostridium hylemonae DSM 15053] gi|225162547|gb|EEG75166.1| hypothetical protein CLOHYLEM_04696 [Clostridium hylemonae DSM 15053] Length = 282 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 95/270 (35%), Positives = 132/270 (48%), Gaps = 17/270 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ R +I G+D + D T T FG R+DLSK FP LT ++ KS Sbjct: 8 FIDMCRDIIDNGTDTKGEKVRPVWEDGTPAYTVKKFGVVNRYDLSKEFPALTLRRTGIKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 ELLW + SN +H IWD WAD+DG +G YG Q Y + DQI Sbjct: 68 CTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMGVKHQYKEGMFDQIDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168 ++ L+ +PYSRR + + + + +MAL PC F V K L+ L QRS Sbjct: 126 VIYDLKHNPYSRRIMTNLYVHQDLHEMALYPCAYSMTFNVTKEKGSDRLTLNGILNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV +N+ YS+L MLA V G + GEF+H + D H+Y+ H + ++R P P Sbjct: 186 DVLAANNWNVCQYSVLLHMLAQVCGMKAGEFVHVIADAHIYDRHIPMIEELIAREPLPAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 +NP I D F +D L Y H I Sbjct: 246 AFWLNPEIKDFYEFTRDDVKLIDYNTHEQI 275 >gi|89512151|gb|ABD73972.1| dihydrofolate reductase [Plasmodium yoelii] gi|89512153|gb|ABD73973.1| dihydrofolate reductase [Plasmodium yoelii killicki] gi|89512155|gb|ABD73974.1| dihydrofolate reductase [Plasmodium yoelii nigeriensis] gi|89512157|gb|ABD73975.1| dihydrofolate reductase [Plasmodium yoelii yoelii] gi|89512159|gb|ABD73976.1| dihydrofolate reductase [Plasmodium yoelii yoelii] Length = 172 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/172 (46%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+L++ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLNQYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + +Y +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMHDNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +DKMALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDLDKMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|225696043|gb|ACO06797.1| thymidylate synthase [Saimiri sciureus] Length = 158 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 78/158 (49%), Positives = 100/158 (63%), Gaps = 20/158 (12%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89 FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D G+ Sbjct: 1 FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGD 60 Query: 90 LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN + M Sbjct: 61 LGPVYGFQWRHFGAEYRDMDSDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 ALPPCH L QFYV NG+LSCQLYQRSGD+ LG+PFNIA Sbjct: 121 ALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIA 158 >gi|225696033|gb|ACO06792.1| thymidylate synthase [Pan troglodytes] gi|225696035|gb|ACO06793.1| thymidylate synthase [Pan paniscus] Length = 159 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 20/159 (12%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89 FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D G+ Sbjct: 1 FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGD 60 Query: 90 LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGP+YG QWR + DY G +DQ+ ++ +++++P RR I+ AWN + M Sbjct: 61 LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKSNPDDRRIIMCAWNPRDLPLM 120 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIAS Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIAS 159 >gi|167758813|ref|ZP_02430940.1| hypothetical protein CLOSCI_01156 [Clostridium scindens ATCC 35704] gi|167663553|gb|EDS07683.1| hypothetical protein CLOSCI_01156 [Clostridium scindens ATCC 35704] Length = 282 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 132/271 (48%), Gaps = 19/271 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ R +I G+D R D T T FG R+DLSK FP LT ++ KS Sbjct: 8 FIDMCRDIIDHGTDTRGEKVRPVWEDGTPAYTIKKFGVVNRYDLSKEFPALTLRRTAIKS 67 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 ELLW + SN + LH H IWD WAD+DG +G YG Q Y + DQ+ Sbjct: 68 CTDELLWIWQKKSNDIHELHSH---IWDSWADEDGLIGKAYGYQMGVKHKYKEGMFDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 125 RVIYDLKHNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEQRSDRLTLNGILNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DV +N+ Y++L MLA V Q GEF+H + D H+Y+ H + + R P Sbjct: 185 NDVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHVPMIEELIKREPLPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 P+ +NP I D F D L YE H I Sbjct: 245 PKFWLNPEIKDFYQFTRNDVKLIGYETHEQI 275 >gi|225696039|gb|ACO06795.1| thymidylate synthase [Lemur catta] Length = 158 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 77/158 (48%), Positives = 100/158 (63%), Gaps = 20/158 (12%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGE 89 FPLLTTK+V WK V+ ELLWF++G +N L GV IWD + +G+ Sbjct: 1 FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRGFLDGLGFSTRGEGD 60 Query: 90 LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN + M Sbjct: 61 LGPVYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLM 120 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 ALPPCH L QFYV NG+LSCQLYQRSGD+ LG+PFNIA Sbjct: 121 ALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIA 158 >gi|225696041|gb|ACO06796.1| thymidylate synthase [Macaca mulatta] Length = 159 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 78/159 (49%), Positives = 100/159 (62%), Gaps = 20/159 (12%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89 FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D G+ Sbjct: 1 FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGD 60 Query: 90 LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN + M Sbjct: 61 LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIAS Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIAS 159 >gi|642840|gb|AAA62156.1| thymidylate synthase [Bacillus phage beta22] Length = 292 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 93/263 (35%), Positives = 134/263 (50%), Gaps = 21/263 (7%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVS 78 D T T+S QM+FD +K P+LT K+V WK+ + E+L F + + Y H+H + Sbjct: 33 DGTPAYTKSVISTQMKFD-NKEVPILTQKRVAWKTAIKEILAFWKDKEYRFDYFHKHNIH 91 Query: 79 IWDEWADKDGE----LGPIYGVQW-------------RSWPDYDGNVIDQISSIVQSLRA 121 IWDEW KDG+ +GP YG Q P Y ++DQ+ ++ L Sbjct: 92 IWDEWEIKDGKWKGTIGPSYGYQMGKLVRKGELLDIVHGEPTY--KMLDQVDYLLDQLNT 149 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRRHI S WN+ +D+MAL PC Q+ V G L + S D+ LG PFN+ Y Sbjct: 150 NPSSRRHITSLWNIHDLDEMALNPCVWNTQWLVKEGSLHLIVGVPSNDMGLGNPFNVFQY 209 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +L M+A V G++ G + D H+Y H E + Q+S P + INP I + Sbjct: 210 YVLQRMIAQVTGYEIGTLTFNINDAHIYERHIEPLEKQISLPSYPAPILRINPEIKNFYD 269 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 F +DF L YE I +V++ Sbjct: 270 FTIDDFDLVGYEHGPTISMEVAI 292 >gi|89512125|gb|ABD73959.1| dihydrofolate reductase [Plasmodium berghei] gi|89512127|gb|ABD73960.1| dihydrofolate reductase [Plasmodium berghei] Length = 172 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 79/172 (45%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+L++ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLNEYFPLLTTKKLFIRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + +Y +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMHDNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|75758390|ref|ZP_00738513.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74494116|gb|EAO57209.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 286 Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 89/264 (33%), Positives = 134/264 (50%), Gaps = 24/264 (9%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D + + T+ FG R+DLSK FP TT+ + K++ E+ W R SN ++ Sbjct: 29 EDGSPIATKRIFGVVNRYDLSKEFPAPTTRPLPLKTIFDEVDWIYRKRSN--NVNDMRAK 86 Query: 79 IWDEWA-----------------DKDGELGPIYGVQ-WRSWPDYDGNVIDQISSIVQSLR 120 IW++WA +K G +G YG Q + YD +Q+ ++ L+ Sbjct: 87 IWNQWAFKKTRLRFSKTFPFVRLEKKGSIGEAYGYQVAKPIFGYD----NQMDYVLGELK 142 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP++RR ++ WNV +M LPPC QF+ D K + L QRS D FN+ Sbjct: 143 RDPFTRRAVIEMWNVDDTGRMNLPPCAHHLQFWSDGKKTNLILKQRSQDFVTANAFNVCE 202 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y++L M+A IG + GE +H +GD H+YN H E A+ + R P P + INP D Sbjct: 203 YAILLHMVARHIGQEVGELLHIIGDCHIYNKHLELAEELVKREPYAAPTLWINPEKTDFY 262 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF +DF L +Y+ H + +V+V Sbjct: 263 SFTADDFRLENYDKHPQMKIEVAV 286 >gi|160892516|ref|ZP_02073306.1| hypothetical protein CLOL250_00045 [Clostridium sp. L2-50] gi|156865557|gb|EDO58988.1| hypothetical protein CLOL250_00045 [Clostridium sp. L2-50] Length = 276 Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 131/259 (50%), Gaps = 11/259 (4%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R +I+ G D T T FG R+DLSK FP +T +K + KS Sbjct: 8 FIEMCRSIIENGYSTEGEKVRPKWEDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTYIKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 + E+LW + SN +H IWD WAD+DG +G YG Q Y + DQ+ Sbjct: 68 AIDEILWIWQKKSN--NVHDLKSHIWDSWADEDGSIGKAYGYQMGVKHQYKEGMFDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 ++ L+ +PYSRR + + + + +M L PC F V +L+ L QRS DV Sbjct: 126 LIYDLKHNPYSRRMMTNMYVHEDLHEMNLYPCAYGMTFNVTGDRLNAILNQRSQDVLAAN 185 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 +N+ Y+ L M+A V GF+ GE +H + D H+Y+ H +SR P+ +NP Sbjct: 186 NWNVVQYAALVYMIAQVTGFKPGELVHVIADAHIYDRHIPIVKELISRETYPAPKFTMNP 245 Query: 235 NIVDLLSFRYEDFTLRSYE 253 ++ D F +DFT+ Y+ Sbjct: 246 DVKDFYQFTLDDFTIEDYQ 264 >gi|228904773|ref|ZP_04068827.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222] gi|228854787|gb|EEM99391.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222] Length = 306 Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 89/264 (33%), Positives = 134/264 (50%), Gaps = 24/264 (9%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D + + T+ FG R+DLSK FP TT+ + K++ E+ W R SN ++ Sbjct: 49 EDGSPIATKRIFGVVNRYDLSKEFPAPTTRPLPLKTIFDEVDWIYRKRSN--NVNDMRAK 106 Query: 79 IWDEWA-----------------DKDGELGPIYGVQ-WRSWPDYDGNVIDQISSIVQSLR 120 IW++WA +K G +G YG Q + YD +Q+ ++ L+ Sbjct: 107 IWNQWAFKKTRLRFSKTFPFVRLEKKGSIGEAYGYQVAKPIFGYD----NQMDYVLGELK 162 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP++RR ++ WNV +M LPPC QF+ D K + L QRS D FN+ Sbjct: 163 RDPFTRRAVIEMWNVDDTGRMNLPPCAHHLQFWSDGKKTNLILKQRSQDFVTANAFNVCE 222 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y++L M+A IG + GE +H +GD H+YN H E A+ + R P P + INP D Sbjct: 223 YAILLHMVARHIGQEVGELLHIIGDCHIYNKHLELAEELVKREPYAAPTLWINPEKTDFY 282 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF +DF L +Y+ H + +V+V Sbjct: 283 SFTADDFRLENYDKHPQMKIEVAV 306 >gi|291244011|ref|XP_002741893.1| PREDICTED: thymidylate synthase-like [Saccoglossus kowalevskii] Length = 207 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 87/251 (34%), Positives = 123/251 (49%), Gaps = 69/251 (27%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWAD--- 85 +RFD+ FPLLTTK+V W+ V EL+WF++G +N L V IWD E+ D Sbjct: 6 LRFDMPDQFPLLTTKRVFWRGVAEELIWFIKGSTNAKELSDKNVHIWDANGSREFLDSRG 65 Query: 86 ----KDGELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 ++G+LGP+YG QWR + DY IDQ+++++++++ +P+ RR I++AW Sbjct: 66 LQEREEGDLGPVYGFQWRHFGAQYKDMHSDYSNQGIDQLANVIETIKTNPHDRRIIMTAW 125 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + KMALPPCH QFYV N +LSCQLYQRS D+ P Sbjct: 126 NPTDLPKMALPPCHAFVQFYVCNDELSCQLYQRSADMIQRTP------------------ 167 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 R P++ I I ++ FRYEDF L Y Sbjct: 168 -------------------------------RPFPKLHIKRKIENIDDFRYEDFELEGYS 196 Query: 254 PHAAILAKVSV 264 PH I ++V Sbjct: 197 PHPKIPMDMAV 207 >gi|225696037|gb|ACO06794.1| thymidylate synthase [Gorilla gorilla] Length = 159 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 20/159 (12%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89 FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D G+ Sbjct: 1 FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGD 60 Query: 90 LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN + M Sbjct: 61 LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNI S Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIXS 159 >gi|325262065|ref|ZP_08128803.1| thymidylate synthase [Clostridium sp. D5] gi|324033519|gb|EGB94796.1| thymidylate synthase [Clostridium sp. D5] Length = 282 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 92/270 (34%), Positives = 132/270 (48%), Gaps = 17/270 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++ + R +I+ G+ D T FG R+DL K FP LT ++ KS Sbjct: 8 FIGMCRDIIENGTSTEGEKVRPVWEDGAPAYTVKRFGVVNRYDLRKEFPALTLRRTGIKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 V ELLW + SN +H IWD WAD+DG +G YG Q Y ++DQ+ Sbjct: 68 CVDELLWIWQKKSN--NIHELNSHIWDSWADEDGSIGKAYGYQMGVKHQYREGMMDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSG 168 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 126 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKENNSDKLTLNAILNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV +N+ Y++L MLA V G Q GEF+H + D H+Y+ H + +SR P P Sbjct: 186 DVLAANNWNVCQYAVLVHMLAQVCGMQVGEFVHVIADAHIYDRHIPLIEELISREPFPAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 Q +NP + D F +D L +YE H I Sbjct: 246 QFWLNPEVKDFYDFTTDDVRLDNYETHPQI 275 >gi|153854663|ref|ZP_01995913.1| hypothetical protein DORLON_01909 [Dorea longicatena DSM 13814] gi|149752767|gb|EDM62698.1| hypothetical protein DORLON_01909 [Dorea longicatena DSM 13814] Length = 282 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 92/271 (33%), Positives = 135/271 (49%), Gaps = 19/271 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R +I G+D R D T T FG R+DLSK FP LT ++ KS Sbjct: 8 FINMCRDIIDNGTDTRGEKVRPVWEDGTPAYTIKKFGVVNRYDLSKEFPALTLRRTAIKS 67 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 ELLW + SN ++ LH H IWD WAD++G +G YG Q Y + DQ+ Sbjct: 68 CTDELLWIWQQKSNNINDLHSH---IWDSWADENGSIGKAYGYQMGVKHQYKEGMFDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 125 RVIYDLKNNPYSRRIMTNIYVHEDLHEMNLYPCAYSMTFNVTKKPGHDKLTLNAILNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DV +N+ Y++L MLA V + GEF+H + D H+Y+ H + +SR P Sbjct: 185 NDVLAANNWNVCQYAVLIHMLAQVCDMEVGEFVHVIADAHIYDRHVPMIEELISRKPLPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 P+ +NP + D F +D L Y+ H I Sbjct: 245 PKFWLNPEVKDFYQFTRDDVKLIDYQTHDQI 275 >gi|225027000|ref|ZP_03716192.1| hypothetical protein EUBHAL_01256 [Eubacterium hallii DSM 3353] gi|224955685|gb|EEG36894.1| hypothetical protein EUBHAL_01256 [Eubacterium hallii DSM 3353] Length = 276 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 122/234 (52%), Gaps = 2/234 (0%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D T T FG R+DLSK FP +T +K + +S + E+LW + SN +H I Sbjct: 33 DGTYAYTIKKFGVVNRYDLSKEFPAITLRKTYIRSAIDEILWIWQKKSN--NVHDLSSHI 90 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 WDEWAD+DG +G YG Q Y +DQ+ ++ L+ +P+SRR + + + + Sbjct: 91 WDEWADEDGSIGKAYGYQLGKKHKYKEGEMDQVDRVLFDLKENPFSRRIMTNIYVHEDLH 150 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 +M L PC F V +L+ L QRS D+ +N+ Y+ L MM A V GF+ GE Sbjct: 151 EMNLYPCAYSMTFNVTGNRLNAILNQRSQDILAANNWNVVQYAALLMMFAQVSGFEPGEL 210 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 +H + D H+Y+ H + R P++ +NP + D F +DFT+ YE Sbjct: 211 VHVIADAHIYDRHIPIVKELIQRPVYPAPKVTLNPEVKDFYKFTVDDFTIEDYE 264 >gi|295094923|emb|CBK84014.1| thymidylate synthase [Coprococcus sp. ART55/1] Length = 276 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 82/235 (34%), Positives = 123/235 (52%), Gaps = 2/235 (0%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T T FG R+DLSK FP +T +K + KS + ELLW + SN +H Sbjct: 32 EDGTYAYTIKRFGVVNRYDLSKEFPAITLRKTYVKSAIDELLWIWQKKSN--NVHDLKSH 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD++G +G YG Q Y ++DQ+ ++ L+ +PYSRR + + + + Sbjct: 90 IWDSWADENGSIGKAYGYQLGVKHKYKEGMMDQVDRLIYDLKNNPYSRRMLTNIYVHQDL 149 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 +M L PC F V +L+ L QRS DV +N+ Y++L MLA V GF+ GE Sbjct: 150 SEMNLYPCAYSMTFNVTGDRLNAILNQRSQDVLAANNWNVVQYAVLVHMLAQVTGFKPGE 209 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 +H + D H+Y+ H ++R P+ +NP++ D F +DF + YE Sbjct: 210 LVHVIADAHIYDRHIPIVKELITRPTHPAPRFYMNPDVKDFYDFTLDDFRIEDYE 264 >gi|197303683|ref|ZP_03168720.1| hypothetical protein RUMLAC_02412 [Ruminococcus lactaris ATCC 29176] gi|197297203|gb|EDY31766.1| hypothetical protein RUMLAC_02412 [Ruminococcus lactaris ATCC 29176] Length = 301 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 89/270 (32%), Positives = 133/270 (49%), Gaps = 17/270 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R +I+ G+ D T T FG R+DLSK FP LT ++ KS Sbjct: 27 FINMCRDIIENGTSTEGEKVRPKWEDGTAAYTIKKFGVVNRYDLSKEFPALTLRRTAIKS 86 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 V ELLW + SN +H IWD WAD++G +G YG Q + Y ++DQ+ Sbjct: 87 CVDELLWIWQKKSN--NVHELKSHIWDSWADENGSIGKAYGYQMQVKHQYKEGMMDQVDR 144 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY------QRSG 168 ++ L+ +PYSRR + + + + +M L PC F V + S QL QRS Sbjct: 145 VLYDLKENPYSRRIMTNLYVHEDLHEMNLYPCAYSMTFNVTKEEGSEQLTLNGILNQRSQ 204 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV +N+ Y++L M A V G + GE +H + D H+Y+ H + +SR P P Sbjct: 205 DVLTANNWNVCQYAVLLHMFAQVCGMKAGELVHVIADAHIYDRHIPLIEELISREPLPAP 264 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 + +NP + D F +D L YE H I Sbjct: 265 KFWLNPEVKDFYDFTPDDVRLEDYETHPQI 294 >gi|163815127|ref|ZP_02206508.1| hypothetical protein COPEUT_01283 [Coprococcus eutactus ATCC 27759] gi|158449536|gb|EDP26531.1| hypothetical protein COPEUT_01283 [Coprococcus eutactus ATCC 27759] Length = 294 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 121/227 (53%), Gaps = 2/227 (0%) Query: 26 TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD 85 T FG R+DLSK FP +T +K + KS + ELLW + SN +H IWD WAD Sbjct: 57 TIKKFGVVNRYDLSKEFPAITLRKTYIKSAIDELLWIWQKKSN--NVHDLKSHIWDSWAD 114 Query: 86 KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 ++G +G YG Q Y ++DQ+ ++ L+ +PYSRR + + + + +M L P Sbjct: 115 ENGSIGKAYGYQLGVKHQYKEGMMDQVDRLLYDLKNNPYSRRMMTNIYVHQDLHEMNLYP 174 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 C F V +L+ L QRS DV +N+ Y+ L M+A V GF+ GE +H + D Sbjct: 175 CAYSMTFNVTGDRLNAILNQRSQDVLTANNWNVVQYAALVYMIAQVTGFKPGELVHVIAD 234 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 H+Y+ H + R P++I+NP++ D F +DFT+ Y Sbjct: 235 AHIYDRHIPLVKELIKRPTYPAPKVILNPDVKDFYDFTVDDFTIEDY 281 >gi|317502048|ref|ZP_07960230.1| thymidylate synthase [Lachnospiraceae bacterium 8_1_57FAA] gi|331090436|ref|ZP_08339317.1| thymidylate synthase [Lachnospiraceae bacterium 3_1_46FAA] gi|316896522|gb|EFV18611.1| thymidylate synthase [Lachnospiraceae bacterium 8_1_57FAA] gi|330401183|gb|EGG80776.1| thymidylate synthase [Lachnospiraceae bacterium 3_1_46FAA] Length = 282 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 131/271 (48%), Gaps = 19/271 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ R +I G+ D T T FG R+DLSK FP LT ++ KS Sbjct: 8 FIDMCRDIIDNGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLSKEFPALTLRRTAIKS 67 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 V ELLW + SN V+ L H IWD WAD+ G +G YG Q Y +DQ Sbjct: 68 CVDELLWIWQKKSNNVNELKSH---IWDSWADETGSIGKAYGYQMGVKHQYKEGRMDQTD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V K L+ L QRS Sbjct: 125 RVIFDLKNNPYSRRIMTNIYVHNDLHEMHLYPCAYSMTFNVTKEKDSEKLTLNAILNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DV +N+ Y++L MLA V G + GEF+H + D H+Y+ H + +SR P Sbjct: 185 QDVLAANNWNVCQYAVLVHMLAQVCGMKAGEFVHVIADAHIYDRHVPMIEELISREPLPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 P +NP I D F +D L YE H I Sbjct: 245 PTFWLNPEITDFYDFTPDDVRLDRYETHPQI 275 >gi|153816112|ref|ZP_01968780.1| hypothetical protein RUMTOR_02359 [Ruminococcus torques ATCC 27756] gi|145846597|gb|EDK23515.1| hypothetical protein RUMTOR_02359 [Ruminococcus torques ATCC 27756] Length = 297 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 131/271 (48%), Gaps = 19/271 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ R +I G+ D T T FG R+DLSK FP LT ++ KS Sbjct: 23 FIDMCRDIIDNGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLSKEFPALTLRRTAIKS 82 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 V ELLW + SN V+ L H IWD WAD+ G +G YG Q Y +DQ Sbjct: 83 CVDELLWIWQKKSNNVNELKSH---IWDSWADETGSIGKAYGYQMGVKHQYKEGRMDQTD 139 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V K L+ L QRS Sbjct: 140 RVIFDLKNNPYSRRIMTNIYVHNDLHEMHLYPCAYSMTFNVTKEKDSEKLTLNAILNQRS 199 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DV +N+ Y++L MLA V G + GEF+H + D H+Y+ H + +SR P Sbjct: 200 QDVLAANNWNVCQYAVLVHMLAQVCGMKAGEFVHVIADAHIYDRHVPMIEELISREPLPA 259 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 P +NP I D F +D L YE H I Sbjct: 260 PTFWLNPEITDFYDFTPDDVRLDRYETHPQI 290 >gi|297821349|ref|XP_002878557.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297324396|gb|EFH54816.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 490 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 91/263 (34%), Positives = 141/263 (53%), Gaps = 28/263 (10%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L++++I G D T + FG QMRF+L K FPLLTTKKV W VV E+L + Sbjct: 236 YLNLIQNIISSG----DMNDNNTLTKFGCQMRFNLRKTFPLLTTKKVFWLGVVEEILQLI 291 Query: 64 RGDSNVSYLHRHGVSIWD-------------EWADKDGELGPIYGVQWRSWPDYDGNVI- 109 G N G +IWD ++DG+ +YG+QW+ D +I Sbjct: 292 SGSINP---MEKGSNIWDSDEANEYLNSFGVNATEEDGDHQHLYGLQWKH---TDARLIV 345 Query: 110 ---DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 Q+S ++ ++ +P+++R ++SA N + + K+++ PC QFYV NG+LS Q+YQ Sbjct: 346 QKFSQLSDVINKIKNNPHNQRIMLSACNPSDL-KLSVSPCQTFAQFYVANGELSSQIYQS 404 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S + + IPF+I +YSLLT ++A V G+FI+ +G + + QL SP+ Sbjct: 405 STEASIEIPFSITTYSLLTCIIAHVCDLVAGDFIYVIGQARINKARVKAIQKQLQISPKP 464 Query: 227 LPQMIINPNIVDLLSFRYEDFTL 249 P + INP + +F D L Sbjct: 465 FPILKINPEKKKMDNFEASDLEL 487 >gi|34485973|gb|AAM75815.2| thymidylate synthase [Corallochytrium limacisporum] Length = 207 Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 79/167 (47%), Positives = 103/167 (61%), Gaps = 21/167 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ +I GS + DRTG GT S FG QMRF L FPLLTTK+V W+ V ELL Sbjct: 41 RQYLELVEKIINEGSRKGDRTGTGTLSIFGAQMRFSLRDDIFPLLTTKRVFWRGVAEELL 100 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101 WF+ GD+N L V IWD E+ D ++G+LGP+YG QWR + Sbjct: 101 WFVSGDTNAKTLSDKNVKIWDANGSREFLDNRGLTDREEGDLGPVYGFQWRHFGAEYTTM 160 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCH 147 DY G +DQ++ ++Q+L+ +P RR I+SAWN A + KMALPPCH Sbjct: 161 HDDYTGKGVDQLAEVIQTLQENPNCRRMIISAWNPADLPKMALPPCH 207 >gi|154505857|ref|ZP_02042595.1| hypothetical protein RUMGNA_03398 [Ruminococcus gnavus ATCC 29149] gi|153793875|gb|EDN76295.1| hypothetical protein RUMGNA_03398 [Ruminococcus gnavus ATCC 29149] Length = 272 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 87/246 (35%), Positives = 125/246 (50%), Gaps = 8/246 (3%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T T FG R+DLSK FP LT ++ KS V E+LW + SN +H Sbjct: 22 EDGTSAYTIKKFGIVNRYDLSKEFPALTLRRTGIKSCVDEMLWIWQKKSN--NIHDLNSH 79 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD+DG +G YG Q + Y ++DQ+ ++ L+ +PYSRR + + + + Sbjct: 80 IWDSWADEDGSIGKAYGYQMQVKHQYKEGMMDQVDRVIYDLKNNPYSRRIMTNIYVHQDL 139 Query: 139 DKMALPPCHCLFQFYV----DNGKLSCQ--LYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 +M L PC F V D+ KL+ L QRS DV +N+ Y++L MLA V Sbjct: 140 HEMNLYPCAYSMTFNVTKEKDSDKLTLNGILNQRSQDVLAANNWNVCQYAVLLHMLAQVC 199 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 + GEF+H + D H+Y+ H + + R P P+ +NP + D F +D L Y Sbjct: 200 DMKVGEFVHVIADAHIYDRHIPMIEELIKREPLPAPKFWLNPEVKDFYEFTPDDVRLDGY 259 Query: 253 EPHAAI 258 E H I Sbjct: 260 ETHPQI 265 >gi|166031149|ref|ZP_02233978.1| hypothetical protein DORFOR_00834 [Dorea formicigenerans ATCC 27755] gi|166028996|gb|EDR47753.1| hypothetical protein DORFOR_00834 [Dorea formicigenerans ATCC 27755] Length = 291 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 17/270 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ R +I G+D R D+T T F R+DLSK FP LT ++ KS Sbjct: 17 FIDMCRDIIDNGTDTRGEKVRPVWEDKTPAYTVKKFCVVNRYDLSKEFPALTLRRTAIKS 76 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 ELLW + SN +H IWD WAD+DG +G YG Q Y + DQ+ Sbjct: 77 CTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMSVKHQYKEGMFDQVDR 134 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168 ++ L+ +PYSRR + + + + +M L PC F V + L+ L QRS Sbjct: 135 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKEGHEKLSLNGMLNQRSN 194 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV +N+ Y++L MLA V + GE +H + D H+Y+ H + + R P P Sbjct: 195 DVLTANNWNVCQYAVLLHMLAQVCDMEVGELVHVIADAHIYDRHIPLVEELIKREPLPAP 254 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 + +NP + + F +D L YE H I Sbjct: 255 KFWLNPEVKNFYDFTPDDVKLIDYETHEQI 284 >gi|119622123|gb|EAX01718.1| thymidylate synthetase, isoform CRA_c [Homo sapiens] Length = 135 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 71/135 (52%), Positives = 92/135 (68%) Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 + AWN + MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A Sbjct: 1 MCAWNPRDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIA 60 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 + G + G+FIHTLGD H+Y NH E +QL R PR P++ I + + F+ EDF + Sbjct: 61 HITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQI 120 Query: 250 RSYEPHAAILAKVSV 264 Y PH I +++V Sbjct: 121 EGYNPHPTIKMEMAV 135 >gi|266624663|ref|ZP_06117598.1| thymidylate synthase [Clostridium hathewayi DSM 13479] gi|288863469|gb|EFC95767.1| thymidylate synthase [Clostridium hathewayi DSM 13479] Length = 276 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 84/238 (35%), Positives = 121/238 (50%), Gaps = 2/238 (0%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T T FG R+DLSK FP+LT ++ +KS + ELLW + SN +H Sbjct: 32 EDGTPAHTIKKFGIINRYDLSKEFPILTLRRTAFKSAIDELLWIWQKKSN--NIHDLNSH 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD+ G +G YG Q Y DQ+ ++ L+ +P SRR + + +N + Sbjct: 90 IWDSWADETGSIGKAYGYQLGIRYQYKEGEFDQVDRVLFDLKHNPLSRRIMTNLYNHQDL 149 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 +M L PC F V L+ L QRS D+ +N+ Y++L M ASV G Q GE Sbjct: 150 HEMNLYPCAYSMTFNVSGNVLNGILNQRSQDMLTANNWNVTQYAVLLHMFASVSGLQAGE 209 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 +H + D H+Y+ H + ++P P+ I+ P I D SF + F L Y+ HA Sbjct: 210 LVHVIADAHIYDRHVPIVKEMIEKTPYDAPKFIMGPEIHDFYSFTKDSFRLEDYQYHA 267 >gi|218133162|ref|ZP_03461966.1| hypothetical protein BACPEC_01024 [Bacteroides pectinophilus ATCC 43243] gi|217992035|gb|EEC58039.1| hypothetical protein BACPEC_01024 [Bacteroides pectinophilus ATCC 43243] Length = 275 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 126/240 (52%), Gaps = 4/240 (1%) Query: 26 TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWA 84 T FG R+DLS+ FP++T ++ +KS + E+LW + SN + L+ H IWDEWA Sbjct: 39 TIKKFGVVNRYDLSREFPIMTLRRTAFKSCIDEILWIWQKKSNNIKDLNSH---IWDEWA 95 Query: 85 DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144 D++G +G YG Q Y ++DQ+ ++ L+ +PYSRR + + + + +M L Sbjct: 96 DENGSIGKAYGYQLGVRHQYKEGMMDQVDRVLYDLKNNPYSRRIMTNIYVHQDLHEMNLY 155 Query: 145 PCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204 PC F V KL+ L QRS D+ +N+ Y++L M+A V G + GE +H + Sbjct: 156 PCAYSMTFNVTGNKLNAILNQRSNDILTANNWNVVQYAVLVHMIAQVSGLEAGELVHVIA 215 Query: 205 DVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 D H+Y+ H + R P +NP++ D F +DF L Y+ I V+V Sbjct: 216 DAHIYDRHIPLVKELIKRQTYDAPVFRMNPDVKDFYEFTVDDFELEDYKYGTQIKIPVAV 275 >gi|309797905|ref|ZP_07692286.1| thymidylate synthase [Escherichia coli MS 145-7] gi|308118513|gb|EFO55775.1| thymidylate synthase [Escherichia coli MS 145-7] Length = 316 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 140/309 (45%), Gaps = 87/309 (28%) Query: 43 PLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP 102 PL++ K V+ K ++ EL W+L+G N+ +L +GV IWD WAD++G+LGP+YG QWR W Sbjct: 8 PLISGKAVNLKPLLVELEWYLKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWE 67 Query: 103 D-------------------------YDG---------NVIDQISSIVQSLRADPYSRRH 128 D Y G IDQ+ IV +LR +P RR Sbjct: 68 DTRIVSHSEYLSKIATFRERGYKVEGYLGISEDRVVLSREIDQLQRIVDTLRMNPTDRRI 127 Query: 129 IVSAWNVALIDKMALPPCHCLFQFY----------------------------------- 153 +++AWNV ++ M LPPCH +F + Sbjct: 128 MLNAWNVGELEDMKLPPCHFVFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLYD 187 Query: 154 --VDNGKLSCQ--------------LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 +D + L QRS D F+G+PFNIA Y +LT LA + G G Sbjct: 188 LEIDGSVTEAELDELGIPKRILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAG 247 Query: 198 EFIHTLGDVHLYNNHFEQ-ADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPH 255 F+H DVHLYNNH E +L ++P ++I PN +L F++++ + Y P Sbjct: 248 AFVHFGFDVHLYNNHMEGVCELMQRQAPEHSDPVVIFPNEWSELDDFKWDEILILGYAPL 307 Query: 256 AAILAKVSV 264 I V+V Sbjct: 308 PWIKVPVAV 316 >gi|167745365|ref|ZP_02417492.1| hypothetical protein ANACAC_00056 [Anaerostipes caccae DSM 14662] gi|317473091|ref|ZP_07932390.1| thymidylate synthase [Anaerostipes sp. 3_2_56FAA] gi|167655086|gb|EDR99215.1| hypothetical protein ANACAC_00056 [Anaerostipes caccae DSM 14662] gi|316899429|gb|EFV21444.1| thymidylate synthase [Anaerostipes sp. 3_2_56FAA] Length = 282 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 88/270 (32%), Positives = 134/270 (49%), Gaps = 17/270 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R +++ G+ D T T FG R+DLSK FP LT +K KS Sbjct: 8 FINMCRDILENGTSTEGEKVRPKWPDGTPAYTIKQFGVVNRYDLSKEFPALTLRKTFVKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 V ELLW + SN +H +WDEWAD+DG +G YG Q R Y ++DQ+ Sbjct: 68 AVDELLWIWQRKSN--NIHDLKSHVWDEWADEDGSIGKAYGYQMRVKHQYAEGMMDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168 ++ L+ +PYSRR + + + + +M L PC F V L+ L QRS Sbjct: 126 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKPGHEKLVLNGILNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+ +N+ YS+L MLA V G + GEF+H + D H+Y+ H + + R P Sbjct: 186 DILAANNWNVVQYSVLLYMLAQVCGMEPGEFVHVIADAHIYDRHIPIIEELIKRPVYDAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 + +NP++ D F +DF + Y+ I Sbjct: 246 KFSMNPDVKDFYEFTLDDFKIEDYKAGEQI 275 >gi|18656511|gb|AAL77812.1|AF389451_19 thymidylate synthase [Tiger frog virus] Length = 124 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 69/124 (55%), Positives = 88/124 (70%) Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 MA+PPCH + QFYV +G+LSC LYQRSGD+ LG PFNIASYSLLT M+A V G + GEF+ Sbjct: 1 MAIPPCHAMCQFYVSDGELSCHLYQRSGDMGLGAPFNIASYSLLTYMMAHVTGLEPGEFV 60 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260 HTLGD H+Y +H E QL R PR P + IN ++ L F+ EDF+L Y+PH I Sbjct: 61 HTLGDAHVYLDHVEPLKTQLEREPRPFPTLRINRSVESLDDFKAEDFSLEGYDPHPTIKM 120 Query: 261 KVSV 264 +++V Sbjct: 121 RMAV 124 >gi|319645688|ref|ZP_07999919.1| thymidylate synthase [Bacillus sp. BT1B_CT2] gi|317392235|gb|EFV73031.1| thymidylate synthase [Bacillus sp. BT1B_CT2] Length = 283 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 131/247 (53%), Gaps = 2/247 (0%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRHGV 77 D T T FG +DL K FP+ T + +KS + E+LW + SN L ++GV Sbjct: 37 DDTPAYTLKCFGVLNEYDLQKEFPIATLRPTAFKSGLKEILWIYQDKSNDVQLLEEKYGV 96 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 W WA++DG LG YG Q + Y +QI ++ L+ +PYSRR I + +N Sbjct: 97 KYWRSWANEDGNLGLAYGRQMQYKHKYKEGYFNQIDRLIWDLKNNPYSRRIITNLYNHQD 156 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + M L PC L + L+ L QRS D + N+ Y+LL M+A V G++ G Sbjct: 157 LHGMTLYPCAFLTMWDYGGEFLNMTLVQRSSDYLVAGNINVTQYALLQHMIAQVCGYKPG 216 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 +F H + ++H+Y+ H EQA ++R T P+++I+ +I + ++ E F L Y PH+ Sbjct: 217 KFHHYINNLHIYDRHIEQAKEIINRESLTAPKLVIDNSIKNFYDYKPEHFILEGYRPHSQ 276 Query: 258 ILAKVSV 264 I +V++ Sbjct: 277 IKLEVAL 283 >gi|330004215|ref|ZP_08304841.1| thymidylate synthase [Klebsiella sp. MS 92-3] gi|328536732|gb|EGF63053.1| thymidylate synthase [Klebsiella sp. MS 92-3] Length = 363 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 102/349 (29%), Positives = 146/349 (41%), Gaps = 88/349 (25%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLWF 62 Y +L G +RTG T T ++ L PL+++K V+ K ++ EL W+ Sbjct: 15 YACVLAEAASSGIKSDNRTGTPTIGTCYVNSQYPLWGAAVPLISSKAVNLKPLLVELEWY 74 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD------YD----------- 105 L+G +V++L H V IW+ W +DG LGP+YG QWR W D YD Sbjct: 75 LKGTGDVAFLREHDVKIWEAWTREDGTLGPVYGKQWRRWNDTRIVDRYDFVKNYQSYLYR 134 Query: 106 -----------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 IDQ+ IV LR DP RR ++SAWNV ++ MALPPCH Sbjct: 135 GYKTEGYIGVEEDRVVLSREIDQLQRIVDKLRRDPTDRRIMMSAWNVGELEDMALPPCHF 194 Query: 149 LFQFY---------------------------------------------------VDNG 157 ++ + + Sbjct: 195 MYHVWSRELGFEERLRQANAIGEVHAKYLHESRYTALLAEIARCGEASEEMLDSLNIPRR 254 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 L + QRS DVF+G+PFNIA Y +LT ++A V F H DVH+Y NH + Sbjct: 255 ALCSAMIQRSVDVFVGMPFNIAGYGILTSLIAQVTNHMPMMFSHFGLDVHVYENHMSGVN 314 Query: 218 LQLSRS-PRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R P ++I P ++ FR++D + Y PH I V+V Sbjct: 315 EMMDRDIPENSDPVVIFPESWKEIDDFRWQDVRIEGYAPHPWIKVPVAV 363 >gi|332652454|ref|ZP_08418199.1| thymidylate synthase [Ruminococcaceae bacterium D16] gi|332517600|gb|EGJ47203.1| thymidylate synthase [Ruminococcaceae bacterium D16] Length = 276 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 81/237 (34%), Positives = 123/237 (51%), Gaps = 2/237 (0%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T T FG R+DL K FP++T +K KS V ELLW + SN +H+ Sbjct: 32 EDGTPAHTIKLFGVVNRYDLRKEFPIITVRKQFLKSAVDELLWIWQKKSND--VHQLSSH 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD++G +G YG Q Y +DQ+ ++ L+ DP SRR + + +N + Sbjct: 90 IWDAWADENGTIGKAYGYQLGVKHHYPQGDMDQVDKVLWDLKHDPGSRRILTNLYNHHDL 149 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 +MAL PC F V L+ L QRS D+ +N+ Y++L M A V G + GE Sbjct: 150 SEMALYPCAYSMTFNVSGNTLNGILNQRSQDMLTANGWNVMQYAVLLHMFAQVSGLEAGE 209 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 +H + D H+Y+ H + ++R P P+ I++ ++ D +F + F L Y+ H Sbjct: 210 LVHVIADAHIYDRHVPIVEEIIARQPYDAPKFIMDKSVTDFYAFTKDSFRLEGYQAH 266 >gi|331086111|ref|ZP_08335194.1| thymidylate synthase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407034|gb|EGG86539.1| thymidylate synthase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 282 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 17/265 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R +I G+ D + T FG R+DLSK FP LT ++ KS Sbjct: 8 FIEMCRDIIDNGTSTEGEKVRPKWEDGSYAYTIKKFGVVNRYDLSKEFPALTLRRTGIKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 V E+LW + SN +H IWD WAD+DG +G YG Q + Y ++DQ+ Sbjct: 68 CVDEMLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMQVKHQYREGMMDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DNGKLSCQ--LYQRSG 168 ++ L+ +PYSRR + + + + +M L PC F V D+ KL L QRS Sbjct: 126 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKREDSEKLVLNGILNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV +N+ Y++L MLA V Q GEF+H + D H+Y+ H + + R P P Sbjct: 186 DVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHIPLIEELIKREPLPAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYE 253 + +NP+I D +F ED L Y+ Sbjct: 246 KFWLNPDIKDFYAFTPEDVRLDDYQ 270 >gi|325662312|ref|ZP_08150921.1| thymidylate synthase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471314|gb|EGC74537.1| thymidylate synthase [Lachnospiraceae bacterium 4_1_37FAA] Length = 282 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 17/265 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R +I G+ D + T FG R+DLSK FP LT ++ KS Sbjct: 8 FIEMCRDIIDNGTSTEGEKVRPKWEDGSYAYTIKKFGVVNRYDLSKEFPALTLRRTGIKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 V E+LW + SN +H IWD WAD+DG +G YG Q + Y ++DQ+ Sbjct: 68 CVDEMLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMQVKHQYREGMMDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DNGKLSCQ--LYQRSG 168 ++ L+ +PYSRR + + + + +M L PC F V D+ KL L QRS Sbjct: 126 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKREDSEKLVLNGILNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV +N+ Y++L MLA V Q GEF+H + D H+Y+ H + + R P P Sbjct: 186 DVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHIPLIEELIKREPLPAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYE 253 + +NP+I D +F ED L Y+ Sbjct: 246 KFWLNPDIKDFYAFTPEDVRLDDYQ 270 >gi|153810935|ref|ZP_01963603.1| hypothetical protein RUMOBE_01325 [Ruminococcus obeum ATCC 29174] gi|149832823|gb|EDM87906.1| hypothetical protein RUMOBE_01325 [Ruminococcus obeum ATCC 29174] Length = 282 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 86/266 (32%), Positives = 133/266 (50%), Gaps = 19/266 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R VI+ G+ D T T FG R+DL K FP LT ++ KS Sbjct: 8 FINMCRDVIENGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLRKEFPALTLRRTALKS 67 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + SN + LH H IWD WAD++G +G YG Q Y ++DQ+ Sbjct: 68 AMDEILWIWQKKSNNIKDLHSH---IWDSWADENGSIGKAYGYQLGVKHQYKEGMMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 125 RVLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLTLNAILNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ YS+L MM+A V + GE +H + D H+Y+ H +SR+P Sbjct: 185 QDILAANNWNVCQYSILLMMIAQVCDMEAGELVHVIADCHIYDRHVPVIKELISRTPYPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYE 253 P + +NP I D F +D + +Y+ Sbjct: 245 PTVKLNPEIRDFYEFTTDDLIVENYQ 270 >gi|327198463|ref|YP_004327051.1| putative thymidylate synthase [Erwinia phage phiEa104] gi|311875159|emb|CBX44419.1| putative thymidylate synthase [Erwinia phage phiEa104] Length = 311 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 129/261 (49%), Gaps = 39/261 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY +++ G R R+G F +R D+ K FPLLT K V V ELLW Sbjct: 6 QQYKAFTANILSNGELRHSRSGNTISVPFPEDLRIDVRKEFPLLTCKSVPMSLVAGELLW 65 Query: 62 FLRGDSNVSYLHRHGV-------SIWD---------------------------EWADKD 87 FL G +++ L + +IW D Sbjct: 66 FLAGKTDLHSLRMYQFGSDEGQNTIWTADYERYSKAVKSLIRKVQTGELQEKTLRKIDAQ 125 Query: 88 GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN-VALIDKM-ALPP 145 +LG IYG QWR + D DQI+ ++Q ++ +P SR HIVSAWN VA+ + + ALPP Sbjct: 126 EDLGMIYGSQWREFESCD-TTCDQITRLIQGIKENPASRYHIVSAWNPVAVANNLGALPP 184 Query: 146 CHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204 CH FQ Y + G + + YQRS D FLG+PFNIASY+LL +LA + G+ I + G Sbjct: 185 CHMFFQVYASEGGYMDLRWYQRSVDTFLGLPFNIASYALLLRILAQMTGYTARYVIGSFG 244 Query: 205 DVHLYNNHFEQADLQLSRSPR 225 D H+Y NH A +Q+ +P Sbjct: 245 DAHIYENHVP-AVMQMMDNPE 264 >gi|295107966|emb|CBL21919.1| thymidylate synthase [Ruminococcus obeum A2-162] Length = 282 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 19/266 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ + VI+ G+ D T T FG R+DL + FP LT +K KS Sbjct: 8 FINMCKDVIENGTSTEGEKVRPVWEDGTPAYTIKRFGVVNRYDLREEFPALTLRKTALKS 67 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + SN + LH H IWD WAD++G +G YG Q + Y ++DQ+ Sbjct: 68 AMDEILWIWQKKSNNIHDLHSH---IWDSWADENGSIGKAYGYQLQVKHQYKEGMMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 125 RVLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLTLNAVLNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ YS+L MM+A V G + GE +H + D H+Y+ H +SR+P Sbjct: 185 QDILAANNWNVCQYSILLMMIAQVCGMEAGELVHVIADCHIYDRHVPVIKELISRTPYPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYE 253 P + +NP I + F +D + +Y+ Sbjct: 245 PTVRLNPEIKNFYDFTTDDLIVENYQ 270 >gi|291545325|emb|CBL18433.1| thymidylate synthase [Ruminococcus sp. SR1/5] Length = 282 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 19/266 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ + VI+ G+ D T T FG R+DL K FP LT +K KS Sbjct: 8 FIDMCKDVIENGTSTEGEKVRPVWEDGTPAYTIKRFGVVNRYDLRKEFPALTLRKTALKS 67 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + SN + LH H IWD WAD++G +G YG Q Y ++DQ+ Sbjct: 68 AMDEILWIWQQKSNNIHDLHSH---IWDSWADENGSIGKAYGYQLGVKHQYKEGMMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 125 RVLFDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLVLNAVLNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ YSLL MM+A + GE +H + D H+Y+ H +SR P Sbjct: 185 QDILAANNWNVCQYSLLLMMIAQACDMEAGELVHVIADCHIYDRHIPVIKELISRKPYPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYE 253 P + +NP I D F +D + +YE Sbjct: 245 PTVKLNPEIKDFYKFTTDDLIVENYE 270 >gi|258513542|ref|YP_003189764.1| thymidylate synthase [Desulfotomaculum acetoxidans DSM 771] gi|257777247|gb|ACV61141.1| thymidylate synthase [Desulfotomaculum acetoxidans DSM 771] Length = 276 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 81/233 (34%), Positives = 122/233 (52%), Gaps = 2/233 (0%) Query: 26 TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD 85 T F R++LS+ FP+LT + + K+ + ELLW + SN ++ SIWD WA+ Sbjct: 39 TIKRFAVVNRYNLSEEFPILTLRPTNLKAAIDELLWIWQKKSN--NINDLNSSIWDSWAN 96 Query: 86 KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 +G +G YG Q Y DQ+ I+ LR PYSRR I + +N + + +M L P Sbjct: 97 DEGSIGKAYGYQLGIKHKYREGEFDQVDRILYDLRHTPYSRRIIANMYNHSDLHEMNLYP 156 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 C F V KL+ L QRS DV + +N+A Y++L M A V F+ GEF+H + D Sbjct: 157 CAYSMTFNVTGRKLNAILNQRSQDVLVANNWNVAQYAILIHMFAQVSSFEAGEFVHVIAD 216 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 H+Y+ H + R+ P+++INP+ F +DF L Y+ + I Sbjct: 217 AHIYDRHIPIIKELIQRTSYPAPRLLINPDKKHFYDFTVDDFLLEGYQTNEQI 269 >gi|239625648|ref|ZP_04668679.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519878|gb|EEQ59744.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 278 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 82/238 (34%), Positives = 119/238 (50%), Gaps = 2/238 (0%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T T FG R+DLSK FP++T ++ +KS V ELLW + SN +H Sbjct: 34 EDGTPAHTIKRFGIVNRYDLSKEFPVITLRRTAFKSAVDELLWIWQKKSN--NIHDLNSH 91 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD+DG +G YG Q Y DQ+ I+ L+ +P SRR + + +N + Sbjct: 92 IWDSWADEDGSIGKAYGYQLGVKHHYKEGDFDQVDRILHDLKHNPLSRRIMSNIYNHHDL 151 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 +M L PC F V L+ L QRS D+ +N+ Y++L M A V G GE Sbjct: 152 HEMNLYPCAYSMTFNVSGNTLNGILNQRSQDMLTANSWNVCQYAILLHMFAQVSGLVAGE 211 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 +H + D H+Y+ H + L + P P + ++ +I D F F L +Y+ HA Sbjct: 212 LVHVIADAHIYDRHIPMVEELLKKEPYPGPTLAMDTSITDFYQFTTSSFRLENYQYHA 269 >gi|219681334|ref|YP_002456098.1| putative thymidylate synthase [Erwinia phage phiEa21-4] gi|199580601|gb|ACH88988.1| putative thymidylate synthase [Erwinia phage phiEa21-4] Length = 311 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 129/261 (49%), Gaps = 39/261 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY +++ G R R+G F +R D+ K FPLLT K V V ELLW Sbjct: 6 QQYKAFTANILSNGELRHSRSGNTISVPFPEDLRIDVRKEFPLLTCKSVPMSLVAGELLW 65 Query: 62 FLRGDSNVSYLHRHGV-------SIWD---------------------------EWADKD 87 FL G +++ L + +IW D Sbjct: 66 FLAGKTDLHSLRMYQFGSDEGQNTIWTADYERYSKAVKSLIRKVQTGESQEKTLRKIDAQ 125 Query: 88 GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN-VALIDKM-ALPP 145 +LG IYG QWR + D DQI+ +++ ++ +P SR HIVSAWN VA+ + + ALPP Sbjct: 126 EDLGMIYGSQWREFESCD-TTCDQITRLIEGIKENPASRYHIVSAWNPVAVANNLGALPP 184 Query: 146 CHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204 CH FQ Y + G + + YQRS D FLG+PFNIASY+LL +LA + G+ I + G Sbjct: 185 CHMFFQVYASEGGYMDLRWYQRSVDTFLGLPFNIASYALLLRILAQMTGYTARYVIGSFG 244 Query: 205 DVHLYNNHFEQADLQLSRSPR 225 D H+Y NH A +Q+ +P Sbjct: 245 DAHIYENHVP-AVMQMMDNPE 264 >gi|119622124|gb|EAX01719.1| thymidylate synthetase, isoform CRA_d [Homo sapiens] Length = 208 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 68/124 (54%), Positives = 87/124 (70%) Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FI Sbjct: 85 MALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFI 144 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260 HTLGD H+Y NH E +QL R PR P++ I + + F+ EDF + Y PH I Sbjct: 145 HTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKM 204 Query: 261 KVSV 264 +++V Sbjct: 205 EMAV 208 >gi|218673225|ref|ZP_03522894.1| thymidylate synthase [Rhizobium etli GR56] Length = 107 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 66/107 (61%), Positives = 84/107 (78%) Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 KLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA Sbjct: 1 KLSCQLYQRSADIFLGVPFNIASYALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFDQAK 60 Query: 218 LQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LQL+R P+ LP M INP + D+ F ++DF L YE A+I A ++V Sbjct: 61 LQLTRRPKPLPFMRINPEVKDIFGFTFDDFELIGYEADASIKAPIAV 107 >gi|167766809|ref|ZP_02438862.1| hypothetical protein CLOSS21_01317 [Clostridium sp. SS2/1] gi|317498799|ref|ZP_07957087.1| thymidylate synthase [Lachnospiraceae bacterium 5_1_63FAA] gi|167711563|gb|EDS22142.1| hypothetical protein CLOSS21_01317 [Clostridium sp. SS2/1] gi|291560612|emb|CBL39412.1| thymidylate synthase [butyrate-producing bacterium SSC/2] gi|316893934|gb|EFV16128.1| thymidylate synthase [Lachnospiraceae bacterium 5_1_63FAA] Length = 282 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 122/246 (49%), Gaps = 10/246 (4%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVS 78 D T FG R+DLSK FP LT +K + KS + ELLW + SN V+ L H Sbjct: 33 DGESAYTIKQFGVVNRYDLSKEFPALTLRKTYIKSAIDELLWIWQKKSNNVNDLKSH--- 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWDEWAD+DG +G YG Q Y ++DQ+ ++ L+ +PYSRR + + + + Sbjct: 90 IWDEWADEDGSIGKAYGYQMGVKHQYKEGMMDQVDRVIYDLKHNPYSRRIMTNIYVHQDL 149 Query: 139 DKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 +M L PC F V D L+ L QRS D+ +N+ Y+ L M+A V Sbjct: 150 HEMNLYPCAYSVTFNVTKKPGHDKLTLNAILNQRSQDILAANNWNVVQYAALVYMMAQVC 209 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 + GE +H + D H+Y+ H + R P++ +NP + D F +DF + Y Sbjct: 210 DMEPGELVHVIADAHIYDRHIPIIKEMIKRETYPAPKVTLNPEVKDFYEFTTDDFKIEDY 269 Query: 253 EPHAAI 258 + I Sbjct: 270 QAGEQI 275 >gi|329939291|ref|ZP_08288627.1| Thymidylate synthase [Streptomyces griseoaurantiacus M045] gi|329301520|gb|EGG45414.1| Thymidylate synthase [Streptomyces griseoaurantiacus M045] Length = 298 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 130/279 (46%), Gaps = 22/279 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH--WKSVVHEL 59 QY +L +++ G R G + M FDL+ GFP++T + + W+ + EL Sbjct: 13 EQYRRILGAILESGIPVPTRQGPEALTLMQQTMSFDLANGFPVITERSLARFWRKPIGEL 72 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGP-IYGVQWRSWPDYDGNVI 109 F+ G + L G W WA + G+LGP YG + +P +G Sbjct: 73 CAFINGARTLDALAEFGCDWWGPWASEGKTSRRGLPPGDLGPGSYGGAFHDFPTAEGPGF 132 Query: 110 DQISSIVQSLRADPYSRRHIVSAW-------NVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DQ +V+ LR P R H VS W K + PCH V GKL Sbjct: 133 DQFRHLVEQLRELPGDRTHFVSPWIPQYQVRGEGKTPKTTISPCHGWVHVRVLGGKLHLH 192 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRSGDV +G+P N+ Y+ L +ML + G + HT+ D H+Y + ++ L R Sbjct: 193 MFQRSGDVPVGVPSNMIQYAALLLMLEHLTGIPAARYYHTISDAHVYADQVDRVRGMLDR 252 Query: 223 SPRTLPQMIINPN---IVDLLSFRYEDFTLRSYEPHAAI 258 PR LP + +N + + D+ FR E F L Y+PH AI Sbjct: 253 EPRRLPTVTLNESGRRVKDIHDFRPEHFDLADYDPHPAI 291 >gi|302671643|ref|YP_003831603.1| thymidylate synthase ThyA [Butyrivibrio proteoclasticus B316] gi|302396116|gb|ADL35021.1| thymidylate synthase ThyA [Butyrivibrio proteoclasticus B316] Length = 283 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 120/251 (47%), Gaps = 8/251 (3%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D T T FG R+DLSK FP++T +K KS E+LW + SN +H I Sbjct: 33 DGTPAYTIKKFGVVNRYDLSKEFPIMTLRKTALKSATDEILWIYQKKSN--NIHDLNSHI 90 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 WDEWAD+ G +G YG Q Y DQI ++ L+ +P+SRR + + + + + Sbjct: 91 WDEWADETGSIGKAYGYQIGQKSIYKEGEFDQIDRVIYDLKNNPFSRRIMTNTYVFSDLH 150 Query: 140 KMALPPCHCLFQFYVDNGK------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 +M L PC + V K L+ L QRS DV +N+ Y++L MLA V Sbjct: 151 EMNLYPCAYSVTYNVTQKKGEDKLTLNAILNQRSQDVLAANNWNVVQYAVLVHMLAQVCD 210 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GE +H + D H+Y+ H + R P P+ +NP+I D F D +L YE Sbjct: 211 MNVGELVHVIADAHIYDRHVPLIKELIERKPLPAPKFHLNPDIKDFYEFTRNDVSLEGYE 270 Query: 254 PHAAILAKVSV 264 L + + Sbjct: 271 VAGEQLKDIPI 281 >gi|313905071|ref|ZP_07838441.1| thymidylate synthase [Eubacterium cellulosolvens 6] gi|313470141|gb|EFR65473.1| thymidylate synthase [Eubacterium cellulosolvens 6] Length = 282 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 86/265 (32%), Positives = 128/265 (48%), Gaps = 19/265 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ R +I G D T T FG R+DL K FP +T ++ KS Sbjct: 8 FVDMCRDIIDHGCSTEGEKVRPHWEDGTSAYTIKKFGVVNRYDLRKEFPAITLRRTAIKS 67 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 ELLW + SN V L H IWD WAD++G +G YG Q + +DQ+ Sbjct: 68 CTDELLWIWQKKSNNVKDLKSH---IWDAWADENGTIGKAYGYQLGVKYKFPEGEMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRS 167 ++ L+ +PYSRR + S +N + +MAL PC F V L+ L QRS Sbjct: 125 RLIYDLKNNPYSRRILTSIYNFQDLHEMALYPCAYSMTFNVTKEPGSEKLVLNSILNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ Y++LTMM+A G GEF+H + D H+Y+ H + ++R Sbjct: 185 QDILTANNWNVCQYAILTMMIAQTCGMIPGEFMHVIADAHIYDRHIPLVEELITREQYPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSY 252 P++ +NP I D F +D + Y Sbjct: 245 PKVHLNPEITDFYQFTPDDVIVEDY 269 >gi|289450174|ref|YP_003475119.1| thymidylate synthase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184721|gb|ADC91146.1| thymidylate synthase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 276 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 127/233 (54%), Gaps = 2/233 (0%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D T T TF R+DLS+ FPLLT +K+++K+ + E+LW + SN + I Sbjct: 33 DGTPAHTLKTFALVNRYDLSEEFPLLTLRKINFKAALDEMLWIWQRKSN--KIADLNSKI 90 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 WD WA +DG +G YG Q Y +DQ+ ++ LR DPYSRR I + +N A ++ Sbjct: 91 WDSWAGEDGTIGKAYGYQLGVKHHYPEGDMDQVDRVLYLLRNDPYSRRIITNIYNHADLN 150 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 +M L PC F V +L+ L QRS D+ + +N+A Y+ L +M+A + G++ GE Sbjct: 151 EMNLYPCAYSVTFNVTGNRLNALLNQRSQDMLVANNWNVAQYAALLLMIAKITGYEPGEL 210 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 +H + D H+Y+ H + + + + P++ + + D + +DF + +Y Sbjct: 211 VHVIADAHIYDRHIPLVEELIKQPTYSAPKVELKYSGNDFYAVNVDDFVVTNY 263 >gi|210616227|ref|ZP_03291007.1| hypothetical protein CLONEX_03226 [Clostridium nexile DSM 1787] gi|210149893|gb|EEA80902.1| hypothetical protein CLONEX_03226 [Clostridium nexile DSM 1787] Length = 282 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 19/271 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ R +I G D + T F R+DLSK FP LT ++ KS Sbjct: 8 FIDMCRDIIDNGVSTEGEKVRPKWEDGSFAYTLKKFCVVNRYDLSKEFPALTLRRTGIKS 67 Query: 55 VVHELLW-FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 V ELLW + R +NV L H IWD WAD+DG +G YG Q Y ++DQ+ Sbjct: 68 CVDELLWIWQRKSNNVHDLKPH---IWDSWADEDGSIGKAYGYQMSVKHQYKEGMMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DNGKLSCQ--LYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V D+ KL L QRS Sbjct: 125 RVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKNDSDKLVLNGILNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DV +N+ Y++L MLA V Q GEF+H + D H+Y+ H + +SR P Sbjct: 185 QDVLAANNWNVCQYAVLMHMLAQVCDMQVGEFVHVIADAHIYDRHIPLVEELISREPLPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 P +NP + + F +D L +YE + I Sbjct: 245 PTFWLNPEVKNFYEFTPDDVRLDNYETGSQI 275 >gi|148550248|ref|YP_001270350.1| thymidylate synthase [Pseudomonas putida F1] gi|148514306|gb|ABQ81166.1| thymidylate synthase [Pseudomonas putida F1] Length = 234 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 88/236 (37%), Positives = 123/236 (52%), Gaps = 53/236 (22%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104 FLRG N G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNI---ASYSLLT 185 A +D+MALPPCH L+QF+ V+ ++S LY RS D LG+ ++ A Y+LL Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSND--LGLLLDMGKSAQYALLA 234 >gi|291522853|emb|CBK81146.1| thymidylate synthase [Coprococcus catus GD/7] Length = 282 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 81/233 (34%), Positives = 119/233 (51%), Gaps = 8/233 (3%) Query: 26 TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD 85 T FG R+DLSK FP LT +K KS E+LW + SN +H ++WDEWAD Sbjct: 39 TMKKFGVVNRYDLSKEFPALTLRKTAIKSATDEMLWIWQRKSN--NIHDLNSTVWDEWAD 96 Query: 86 KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 ++G +G YG Q Y ++DQ+ ++ L+ +PYSRR + + + + +M L P Sbjct: 97 ENGSIGKAYGYQMGVKHQYKEGMMDQVDRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYP 156 Query: 146 CHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 C F V D L+ L QRS DV +N+ YS+L MLA V Q GE Sbjct: 157 CAYSMTFNVTKKPGDDKLVLNAILNQRSQDVLAANNWNVVQYSVLMHMLAQVCDMQVGEL 216 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 +H + D H+Y+ H + +SR P +NP+I + F +D T+ +Y Sbjct: 217 VHVIADAHIYDRHIPLIEELISRETHPAPIFKLNPDIKNFYDFTTKDITIENY 269 >gi|255994719|ref|ZP_05427854.1| thymidylate synthase [Eubacterium saphenum ATCC 49989] gi|255993432|gb|EEU03521.1| thymidylate synthase [Eubacterium saphenum ATCC 49989] Length = 276 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 125/240 (52%), Gaps = 4/240 (1%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGVS 78 D T T FG +DLS+ FP LT + K V ELLW + R +N+ L+ S Sbjct: 33 DGTPAHTIKMFGIVNEYDLSEEFPALTLRPTAIKLAVDELLWIWQRKSNNIKDLNS---S 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWDEWAD++G +G YG Q + +DQ+ +++ L+ +PYSRR + + +N + I Sbjct: 90 IWDEWADENGSIGKAYGYQMAKKYKFAQGEMDQVDNVIWQLKNNPYSRRILTNIYNFSDI 149 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 +M L PC F V KL+ L QRS D+ +N+ YS+L +L+ V GF+ G+ Sbjct: 150 SEMNLEPCAYSMTFNVTGDKLNGILNQRSQDILAANNWNVVQYSVLLHLLSKVCGFKPGK 209 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 +H + D H+Y+ H + +SR P+ I+ + D F +D + +Y+ I Sbjct: 210 LVHVIADAHIYDRHIPMIEDLISRKSYDAPKFSIDDGVDDFYKFSMDDIKVENYKAGPQI 269 >gi|224158660|ref|XP_002191045.1| PREDICTED: similar to thymidylate synthase, partial [Taeniopygia guttata] Length = 157 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 75/161 (46%), Positives = 100/161 (62%), Gaps = 4/161 (2%) Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y +DQ+ ++++++ +P RR I+ AWN I MALPPCH L QFYV NG+LSCQL Sbjct: 1 YSNQGVDQLQKVIETIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQL 60 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASYSLLT M+A V G + G I + LY QL R Sbjct: 61 YQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKVGYLIILF--ILLYTVSL--LLFQLQRE 116 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I I D+ +F+ EDF + Y PH I +++V Sbjct: 117 PRPFPKLKILREIKDISNFKAEDFQIEDYNPHPPIKMEMAV 157 >gi|225019180|ref|ZP_03708372.1| hypothetical protein CLOSTMETH_03132 [Clostridium methylpentosum DSM 5476] gi|224948032|gb|EEG29241.1| hypothetical protein CLOSTMETH_03132 [Clostridium methylpentosum DSM 5476] Length = 276 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 2/237 (0%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T+ FG R+DLS+ FPLLT +K++ ++ + E+LW + SN + Sbjct: 32 EDGQPAHTKKQFGIVNRYDLSREFPLLTLRKINTRAAIDEILWIWQKKSN--NVQDLNSK 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD+ G +G YG Q +Y + DQ+ ++ L+ +P SRR + + + + Sbjct: 90 IWDSWADESGSIGKAYGYQMAVKHEYSDGMFDQVDRVLHDLKNNPNSRRMLTNIYVHQDL 149 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 +M L PC F V KL+ L QRS D+ + +NI Y+ L M A V G GE Sbjct: 150 HEMNLYPCAYSVTFNVSGNKLNAILNQRSQDMLVANGWNICQYAALIHMFAQVSGLVAGE 209 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 +H + D H+Y+ H + + + P P++ IN + D F +DF Y+ H Sbjct: 210 LVHVIADAHIYDRHIPIIEKLIEQQPFPAPRLEINEEVTDFYRFTPDDFAFPDYQYH 266 >gi|293115507|ref|ZP_05791824.2| thymidylate synthase [Butyrivibrio crossotus DSM 2876] gi|292809488|gb|EFF68693.1| thymidylate synthase [Butyrivibrio crossotus DSM 2876] Length = 283 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 122/241 (50%), Gaps = 10/241 (4%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77 D T T FG R+DLSK FPL+T +K KS ELLW + SN + LH H Sbjct: 33 EDGTPAYTIKKFGVVNRYDLSKEFPLVTLRKTALKSATDELLWIWQKKSNNIHDLHSH-- 90 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWD WAD++G +G YG Q Y ++DQ+ ++ L+ +P+SRR + + + Sbjct: 91 -IWDAWADENGSIGKAYGYQLGVKHRYKEGMMDQVDRVIYDLKNNPFSRRIMTNIYVHQD 149 Query: 138 IDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 + +M L PC F V K L+ L QRS D+ +N+A Y++L MLA V Sbjct: 150 LHEMNLYPCAYSMTFNVTQKKGEDKLTLNAILNQRSQDILTANNWNVAQYAVLVHMLAQV 209 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 Q GE +H + D H+Y+ H + +SR P +NP + D F +D ++ + Sbjct: 210 CDMQVGELVHVIADAHIYDRHIPIVEELISRECYDAPTFHLNPEVKDFYKFTRDDVSVDN 269 Query: 252 Y 252 Y Sbjct: 270 Y 270 >gi|85713217|ref|ZP_01044245.1| thymidylate synthase [Idiomarina baltica OS145] gi|85692960|gb|EAQ30930.1| thymidylate synthase [Idiomarina baltica OS145] Length = 283 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + +I G RTG+ + + +D+ FPL+TT+K ++K+ + E Sbjct: 1 MKQYLQLCQRIIDEGEWVHNARTGINCLTVINADLEYDVEHNQFPLITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL +LRG + + G + W+ A+++ ++G +YGVQ R+W DG Sbjct: 61 LLGYLRGYDSAAQFRDIGCNTWNANANENASWLANPHRKGPDDMGRVYGVQGRAWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + DQ+ +V L R IV+ +N +D L PC F + NGKL YQR Sbjct: 121 SQFDQLQKVVDDLTQGIDDRGEIVTFYNPGELDMGCLRPCMHTHTFSLLNGKLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVARITGHKPGKVFHKIVNAHIYENQLELMRDVQLKREPY 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAI 258 PQ+ INP+I L +DF++ Y+ H I Sbjct: 241 PSPQLHINPDIKTLQDIETWVTKDDFSIEGYQHHPPI 277 >gi|330967053|gb|EGH67313.1| thymidylate synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 234 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 117/220 (53%), Gaps = 48/220 (21%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ ELG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDELGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 VGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFL 172 A +D+MALPPCH L+Q + + ++S LY RS D+ L Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGL 220 >gi|294646594|ref|ZP_06724226.1| thymidylate synthase [Bacteroides ovatus SD CC 2a] gi|292638036|gb|EFF56422.1| thymidylate synthase [Bacteroides ovatus SD CC 2a] Length = 110 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 63/109 (57%), Positives = 82/109 (75%) Query: 156 NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 +G+LS QLYQRS D+FLG+PFNIASY+LL M+A V G + G+F+HT GD H+Y NH EQ Sbjct: 2 DGRLSLQLYQRSADIFLGVPFNIASYALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQ 61 Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LQLSR PR LPQM INP++ ++ F++EDF L +Y+PH I V+V Sbjct: 62 VKLQLSREPRPLPQMKINPDVKNIFDFKFEDFELVNYDPHPHIAGAVAV 110 >gi|257784436|ref|YP_003179653.1| thymidylate synthase [Atopobium parvulum DSM 20469] gi|257472943|gb|ACV51062.1| thymidylate synthase [Atopobium parvulum DSM 20469] Length = 282 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 136/266 (51%), Gaps = 19/266 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ +I+ G+ D T T FG R+DL + FP LT ++ KS Sbjct: 8 FIDMCSDIIENGTTTEGEKVRPTWEDGTSAYTIKKFGVCNRYDLREEFPALTLRRTALKS 67 Query: 55 VVHELLW-FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + + +NV+ L+ H IWD WAD+ G +G YG Q Y DQ+ Sbjct: 68 AMDEVLWIYQKKSNNVNDLNSH---IWDSWADESGSIGKAYGYQVGQVSHYADGDYDQMD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPC--HCLFQFYVDNGK----LSCQLYQRS 167 +++ L+ +P+SRR + + + A + +M L PC + ++ GK L+ L QRS Sbjct: 125 RVLKDLKENPFSRRIMTNLYTFADLSEMNLYPCAFNAIYNVTQGAGKNRPTLNLLLVQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ Y++L MM+A V G + GE +H + D H+Y+ H + +SR Sbjct: 185 QDILAANNWNVCQYAILLMMVAQVSGMEAGELVHMIADAHIYDRHVDIVKELISRPTFDA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYE 253 P++ +NPNI + F +D + Y+ Sbjct: 245 PKVSLNPNITNFYDFTTDDLIVEDYQ 270 >gi|332532620|ref|ZP_08408496.1| thymidylate synthase [Pseudoalteromonas haloplanktis ANT/505] gi|332037836|gb|EGI74285.1| thymidylate synthase [Pseudoalteromonas haloplanktis ANT/505] Length = 283 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 139/283 (49%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G RTG + + +D++ FP++TT+K ++K+ + E Sbjct: 1 MKQYLELCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL +LRG + + G WD A+ + GE +G +YGVQ R W DG Sbjct: 61 LLGYLRGYDSAAQFREIGCKTWDANANDNNAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+S ++ +L+ R I++ +N + L PC F + L YQR Sbjct: 121 STLDQLSKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N E D+QL+R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKIANAHIYENQLELMRDVQLTREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + Y+ H AI SV Sbjct: 241 ASPQLKINPEIKSLEDIETWVTRDDFEVTGYQCHEAIQYPFSV 283 >gi|229829347|ref|ZP_04455416.1| hypothetical protein GCWU000342_01434 [Shuttleworthia satelles DSM 14600] gi|229792510|gb|EEP28624.1| hypothetical protein GCWU000342_01434 [Shuttleworthia satelles DSM 14600] Length = 288 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 23/271 (8%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ +I G+ + D T T FG R+DLS+ FP +T ++ KS Sbjct: 8 FVDMCEEIINRGTGSQGMEVRPRWEDGTPAHTIKRFGVVNRYDLSREFPAITLRRTAIKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQ----WRSWPDYDGNVI- 109 V+E+LW + SN + S+WDEWAD++G +G YG Q + D DG+ + Sbjct: 68 CVNEMLWIWQKKSN--NIRDLKSSVWDEWADEEGSIGKAYGYQIGKKYLHHTDADGSPVY 125 Query: 110 -DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQ 162 DQI +++ LR +P+SRR IV+ +N + +M L PC F V L+ Sbjct: 126 MDQIDAVLYDLRHNPFSRRIIVNMYNFDDLHEMHLYPCAYSMTFNVTKNPKSGRMVLNAI 185 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 L QRS DV +N+ Y++L MLA V + GE +H + D H+Y+ H +SR Sbjct: 186 LNQRSQDVLAANNWNVCQYAVLLHMLAQVCHMEAGELVHVIADAHIYDRHIPLVQELISR 245 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 P+ +NP I D F ED L Y+ Sbjct: 246 EQFPAPKFWLNPEIHDFYQFTEEDIRLDDYQ 276 >gi|295698569|ref|YP_003603224.1| thymidylate synthase [Candidatus Riesia pediculicola USDA] gi|291157314|gb|ADD79759.1| thymidylate synthase [Candidatus Riesia pediculicola USDA] Length = 283 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 86/277 (31%), Positives = 140/277 (50%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QY+DL R +I G + +RT + + +D+ FPL+TT+K+ +KS + E Sbjct: 1 MKQYIDLCRKIIHEGCWIKNNRTKTRCLTIINADLEYDVENNQFPLITTRKISYKSAISE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 ++ +RG + G ++W+ A+++ +LG IYGVQ RSW +DG Sbjct: 61 MIGHIRGYRSAKQFRDLGCNVWEANANQNKSWLSNPYRKGRDDLGRIYGVQGRSWKKHDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ ++Q L+ R I++ +N I+ L PC F + + KL YQR Sbjct: 121 SHLDQLRKVIQHLKDGIDDRAEIITFYNPGEIEMGCLIPCMHTHTFSILDKKLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + ++ G+ H + + H+Y N D+QL RSP Sbjct: 181 SCDVPLGLSFNQIQCFILLALVAQITNYKPGKVYHKIVNAHIYENQLSLMRDVQLKRSPY 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 L ++IINP I L +DF + +Y H I Sbjct: 241 PLSKLIINPKIKKLEDIENWVSSDDFKVINYRFHGKI 277 >gi|330899102|gb|EGH30521.1| thymidylate synthase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 234 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 117/220 (53%), Gaps = 48/220 (21%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFL 172 A +D+MALPPCH L+Q + + ++S LY RS D+ L Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGL 220 >gi|284008551|emb|CBA75098.1| thymidylate synthase [Arsenophonus nasoniae] Length = 283 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 91/277 (32%), Positives = 140/277 (50%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G RTGV + + +D++ FPL+TT+K +K+ + E Sbjct: 1 MKQYLDLCQRIIDEGQWIENKRTGVRCLTIINADLEYDVANNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106 LL +LRG S+ + G + W+ A+++ GE +G +YGVQ RSW DG Sbjct: 61 LLGYLRGYSSAAQFRDIGCNTWNANANENQAWLNNPNRKGEDDMGRVYGVQGRSWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ ++ +L R I++ +N + L PC F + G L YQR Sbjct: 121 TYLDQLQKVISNLSVGIDDRAEIITFYNPGEFELGCLRPCMHTHTFSLLAGTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R+P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALIAQITGHKPGKVYHKIVNAHIYENQLSIMRDIQLKRAPY 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAI 258 +LPQ+ INP+I L DF + Y+ H AI Sbjct: 241 SLPQLQINPDIKTLKDIETWVSSHDFQVIGYQYHDAI 277 >gi|77359700|ref|YP_339275.1| thymidylate synthase [Pseudoalteromonas haloplanktis TAC125] gi|123587148|sp|Q3IDN1|TYSY_PSEHT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|76874611|emb|CAI85832.1| thymidylate synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 283 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G RTG + + +D++ FP++TT+K ++K+ + E Sbjct: 1 MKQYLQLCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL +LRG + + G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 LLGYLRGYDSAAQFREIGCKTWDANANENSAWLNNPHRKGEDDMGRVYGVQGRAWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ++ ++ +L+ R I+S +N + L PC F + L QR Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIISFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSIQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKITNAHIYENQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 PQ+ INPNI L +DF + YE H AI SV Sbjct: 241 ASPQLKINPNIKSLNDIETWVTRDDFEVTGYECHEAIQYPFSV 283 >gi|268590564|ref|ZP_06124785.1| thymidylate synthase [Providencia rettgeri DSM 1131] gi|291313951|gb|EFE54404.1| thymidylate synthase [Providencia rettgeri DSM 1131] Length = 283 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 90/277 (32%), Positives = 135/277 (48%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M YLDL + +I G RTGV + + +D+ FPL+TT+K +K+ + E Sbjct: 1 MKPYLDLCQRIIDEGQWVENKRTGVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+++ GE +G +YGVQ RSW DG Sbjct: 61 LLGYLRGYDNAAQFREIGCNTWNANANENQAWLNNPYRKGEDDMGRVYGVQGRSWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ +V +L+ R I++ +N + L PC F + L YQR Sbjct: 121 THLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R P Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARISGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAI 258 P ++INP I L +DFTL Y+ H AI Sbjct: 241 ASPSLVINPKIQSLEDLETWVTSDDFTLEGYQCHEAI 277 >gi|183597807|ref|ZP_02959300.1| hypothetical protein PROSTU_01136 [Providencia stuartii ATCC 25827] gi|188022562|gb|EDU60602.1| hypothetical protein PROSTU_01136 [Providencia stuartii ATCC 25827] Length = 283 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 90/277 (32%), Positives = 138/277 (49%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + +I G RTGV + + +D++ FPL+TT+K +K+ + E Sbjct: 1 MKQYLELCQRIIDEGQWVENKRTGVRCLTVINADLEYDVANNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106 LL +LRG + + G + W+ A+++ GE +G +YGVQ RSW DG Sbjct: 61 LLGYLRGYDSAAQFREIGCNTWNANANENQAWLNNPHRKGEDDMGRVYGVQGRSWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ +V +L+ R I++ +N + L PC F + L YQR Sbjct: 121 SHLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R P Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 LP + INP I L +DFTL Y+ H AI Sbjct: 241 PLPSLSINPQIKTLEDIETWVSTDDFTLEGYQCHEAI 277 >gi|226323905|ref|ZP_03799423.1| hypothetical protein COPCOM_01680 [Coprococcus comes ATCC 27758] gi|225207454|gb|EEG89808.1| hypothetical protein COPCOM_01680 [Coprococcus comes ATCC 27758] Length = 282 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 86/264 (32%), Positives = 126/264 (47%), Gaps = 17/264 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R +I G+ D T T FG R+DL K FP LT ++ KS Sbjct: 8 FIEMCRDIIDNGTSTEGEKVRPRWEDGTPAYTVKKFGVVNRYDLRKEFPALTLRRTGIKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 ELLW + SN +H IWD WAD+DG +G YG Q Y ++DQ+ Sbjct: 68 CTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMGVKHVYKEGMMDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168 ++ L+ +PYSRR + + + + +M L PC F V K L+ L QRS Sbjct: 126 VLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEKGSDKLTLNGILNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV +N+ Y++L MLA V Q GEF+H + D H+Y+ H + +SR P Sbjct: 186 DVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHISLIEELISRETHPAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSY 252 + +NP + D F +D L Y Sbjct: 246 KFWLNPEVKDFYQFTPDDVRLDDY 269 >gi|113461755|ref|YP_719824.1| thymidylate synthase [Haemophilus somnus 129PT] gi|170718531|ref|YP_001783740.1| thymidylate synthase [Haemophilus somnus 2336] gi|123132252|sp|Q0I563|TYSY_HAES1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036936|sp|B0UWT7|TYSY_HAES2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|112823798|gb|ABI25887.1| thymidylate synthase [Haemophilus somnus 129PT] gi|168826660|gb|ACA32031.1| Thymidylate synthase [Haemophilus somnus 2336] Length = 283 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 92/284 (32%), Positives = 142/284 (50%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + +I G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MRQYLNLCQRIIDQGHWVENERTGKRCLTVINADLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPVRKGTDDMGRVYGVQGRRWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ +N ID L PC F + L YQR Sbjct: 121 ETVDQLRKIVNNLSKGIDDRGEILTFFNPGEIDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + FE D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAYHKIINAHIYEDQFELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H AI SV Sbjct: 240 FPLPRLEINPDIKTLEDLETWVTMDDFKVIGYQCHEAIKYPFSV 283 >gi|154484777|ref|ZP_02027225.1| hypothetical protein EUBVEN_02495 [Eubacterium ventriosum ATCC 27560] gi|149734625|gb|EDM50542.1| hypothetical protein EUBVEN_02495 [Eubacterium ventriosum ATCC 27560] Length = 282 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 17/264 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ R+++ G+D + D + T FG R+DL K FP +T +K +K+ Sbjct: 8 FVDMCRNILDNGTDTKGEKVRPKWDDGSFAYTIKKFGVVNRYDLKKEFPAITLRKTGFKN 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 + ELLW + SN +H IWD WAD+ G +G YG Q Y +DQ+ Sbjct: 68 CLDELLWIWQKKSN--NVHDLNSHIWDAWADETGSIGKAYGYQLGIKHHYKEGDMDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168 ++ L+ +PYSRR + + +N + +M L PC F V + L+ L QRS Sbjct: 126 VLYDLKHNPYSRRIMTNIYNHEDLHEMNLYPCAYSMTFNVTKNEETGNLVLNGILNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV +N+ Y+ L M A V + GEFIH + D H+Y+ H + ++R P Sbjct: 186 DVLTANNWNVCQYAALIHMFAQVNDMEVGEFIHVIADAHIYDKHVPLIEELITREQHPAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSY 252 ++ INP I + F +D L Y Sbjct: 246 KLWINPEIKNFYDFTVDDLKLEDY 269 >gi|167751275|ref|ZP_02423402.1| hypothetical protein EUBSIR_02261 [Eubacterium siraeum DSM 15702] gi|167655782|gb|EDR99911.1| hypothetical protein EUBSIR_02261 [Eubacterium siraeum DSM 15702] gi|291556779|emb|CBL33896.1| thymidylate synthase [Eubacterium siraeum V10Sc8a] Length = 275 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 5/238 (2%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77 D T T F R++L + FP++T ++++++S + E+LW + SN V+ L H Sbjct: 32 EDGTPAHTVKKFCVVNRYNLQEEFPVMTLRRIYYRSAIEEILWIYQKKSNRVADLSTH-- 89 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWD WAD++G +G YG Q Y DQ+ ++ L +P SRR + + +N Sbjct: 90 -IWDSWADENGTIGKAYGWQLGQKSIYPEGEFDQVDKVLYDLSHNPASRRIMTNMYNHKD 148 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +M L PC F V L+ L QRS D+ +N+ Y+ L +M A G + G Sbjct: 149 LHEMGLAPCAYSMTFNVTGDTLNAILNQRSQDMLTANNWNVCQYAALLIMFAKASGLKAG 208 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 E +H + D H+Y+ H + + + P P+M++ +I D F FTL+ Y+ H Sbjct: 209 ELVHVIADAHIYDRHIDAVKRIIEKEPYPAPEMVVE-DITDFYKFTKNSFTLKDYKYH 265 >gi|325577728|ref|ZP_08148003.1| thymidylate synthase [Haemophilus parainfluenzae ATCC 33392] gi|325160473|gb|EGC72599.1| thymidylate synthase [Haemophilus parainfluenzae ATCC 33392] Length = 283 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLSRGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGNKSGKAYHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ+ INP+I L +DF + Y+ H I SV Sbjct: 240 FPSPQLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|145632282|ref|ZP_01788017.1| thymidylate synthase [Haemophilus influenzae 3655] gi|145634072|ref|ZP_01789783.1| thymidylate synthase [Haemophilus influenzae PittAA] gi|144987189|gb|EDJ93719.1| thymidylate synthase [Haemophilus influenzae 3655] gi|145268516|gb|EDK08509.1| thymidylate synthase [Haemophilus influenzae PittAA] Length = 283 Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|229844040|ref|ZP_04464181.1| thymidylate synthase [Haemophilus influenzae 6P18H1] gi|229813034|gb|EEP48722.1| thymidylate synthase [Haemophilus influenzae 6P18H1] Length = 283 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLMKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|167945963|ref|ZP_02533037.1| thymidylate synthase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 93 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 62/93 (66%), Positives = 78/93 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV G + DRTG GTRS FGYQMRFDL++GFP LTTKK+H +S++HELL Sbjct: 1 MKQYLDLMRHVRDQGVTKGDRTGTGTRSVFGYQMRFDLAEGFPALTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 WFL+GD+N+ YL +GV IWDEWAD++G+LGP+ Sbjct: 61 WFLQGDTNIRYLKENGVRIWDEWADENGDLGPV 93 >gi|291531667|emb|CBK97252.1| thymidylate synthase [Eubacterium siraeum 70/3] Length = 275 Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 5/238 (2%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77 D T T F R++L + FP++T ++++++S + E+LW + SN V+ L H Sbjct: 32 EDGTPAHTVKKFCVVNRYNLQEEFPVMTLRRIYYRSAIEEILWIYQKKSNRVADLSTH-- 89 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWD WAD++G +G YG Q Y DQ+ ++ L +P SRR + + +N Sbjct: 90 -IWDSWADENGTIGKAYGWQLGQKSIYPEGEFDQVDRVLYDLSHNPASRRIMTNMYNHKD 148 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +M L PC F V L+ L QRS D+ +N+ Y+ L +M A G + G Sbjct: 149 LHEMGLAPCAYSMTFNVTGDTLNAILNQRSQDMLTANNWNVCQYAALLIMFAKASGLKAG 208 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 E +H + D H+Y+ H + + + P P+M++ +I D F FTL+ Y+ H Sbjct: 209 ELVHVIADAHIYDRHIDAVKRIIEKEPYPAPEMVVE-DITDFYKFTKNSFTLKDYKYH 265 >gi|88797182|ref|ZP_01112772.1| thymidylate synthase [Reinekea sp. MED297] gi|88780051|gb|EAR11236.1| thymidylate synthase [Reinekea sp. MED297] Length = 283 Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + +I G +RTG + + +D+ FPL+TT+K ++K+ + E Sbjct: 1 MKQYLELCQRIIDEGVWVENERTGKRCLTVINADLEYDVEHNQFPLITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 FLGYIRGYDNAADFRKLGARTWDANANDNQAWLNNPHRNGTDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV L R I+S +N L PC F V +GKL YQR Sbjct: 121 GSVDQLQKIVDHLSKGMDDRGEILSFYNPGEFHMGCLRPCMHTHTFSVLDGKLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFFFLAIMAQITGLKPGKAYHKIVNAHIYEDQLELMRDVQLKREPY 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P+++INP+I L +DF++ Y+ H I SV Sbjct: 241 PSPKLVINPDIRSLKDLETWVTMDDFSVEGYQHHDPIAYPFSV 283 >gi|145641907|ref|ZP_01797481.1| thymidylate synthase [Haemophilus influenzae R3021] gi|145273386|gb|EDK13258.1| thymidylate synthase [Haemophilus influenzae 22.4-21] Length = 283 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGIDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGETLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKRAGKAYHKIVNAHIYEDQLELMRDVQLKRKP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPLPKLEINPDIKSLEDLETWVTMDDFKVIGYQSHEPIKYPFSV 283 >gi|331090655|ref|ZP_08339504.1| thymidylate synthase [Lachnospiraceae bacterium 2_1_46FAA] gi|330400069|gb|EGG79720.1| thymidylate synthase [Lachnospiraceae bacterium 2_1_46FAA] Length = 282 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/235 (34%), Positives = 119/235 (50%), Gaps = 10/235 (4%) Query: 26 TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWA 84 T F R+DLSK FP LT ++ KS V E+LW + SN ++ L+ H IWD WA Sbjct: 39 TMKKFCVVNRYDLSKEFPALTLRRTGIKSCVDEMLWIWQKKSNNINDLNSH---IWDSWA 95 Query: 85 DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144 D+DG +G YG Q Y ++DQ+ ++ L+ +PYSRR + + + + +M L Sbjct: 96 DEDGSIGKAYGYQMSVKHQYKEGMMDQVDRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLY 155 Query: 145 PCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 PC F V D L+ L QRS DV +N+ Y++L MLA V Q GE Sbjct: 156 PCAYSVTFNVTKKNDSDKLVLNAILNQRSQDVLAANNWNVCQYAVLVHMLAQVCDMQVGE 215 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 +H + D H+Y+ H + +SR P +NP I D F +D L +Y+ Sbjct: 216 LVHVIADAHIYDRHIPLIEELISRESYPAPAFWLNPEIKDFYEFTTDDVRLDNYQ 270 >gi|160938154|ref|ZP_02085510.1| hypothetical protein CLOBOL_03048 [Clostridium bolteae ATCC BAA-613] gi|158438958|gb|EDP16714.1| hypothetical protein CLOBOL_03048 [Clostridium bolteae ATCC BAA-613] Length = 287 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/238 (33%), Positives = 120/238 (50%), Gaps = 2/238 (0%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T T FG R+DL++ FP++T ++ +KS V ELLW + SN +H Sbjct: 43 EDGTPAHTIKRFGIVNRYDLTREFPVITLRRTAFKSAVDELLWIWQKKSN--NIHDLNSH 100 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD++G +G YG Q Y DQ+ I+ L+ +P SRR + + +N + Sbjct: 101 IWDSWADENGSIGKAYGYQLGVKHHYKEGDFDQVDRILYDLKHNPLSRRIMSNIYNHHDL 160 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 +M L PC F V L+ L QRS D+ +N+ Y++L MLA V G + GE Sbjct: 161 CEMNLYPCAYSMTFNVSGNTLNGILNQRSQDMLTANSWNVCQYAVLLHMLAQVSGLKPGE 220 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 +H + D H+Y+ H + L R P P + ++ +I + F + F L Y+ H Sbjct: 221 LVHVIADAHIYDRHIPMVEELLKREPYPGPTLSMDTSIQNFYQFTTDSFRLEHYQYHT 278 >gi|253579644|ref|ZP_04856913.1| thymidylate synthase [Ruminococcus sp. 5_1_39B_FAA] gi|251849145|gb|EES77106.1| thymidylate synthase [Ruminococcus sp. 5_1_39BFAA] Length = 282 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 10/242 (4%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77 D T T FG R+DL K FP +T ++ KS + E+LW + SN + LH H Sbjct: 32 EDGTPAYTIKKFGVVNRYDLRKEFPAMTLRRTALKSAMDEILWIWQKKSNNIHDLHSH-- 89 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWD WAD+ G +G YG Q Y ++DQ+ ++ L+ +P+SRR + + + Sbjct: 90 -IWDSWADESGSIGKAYGYQLGVKHQYKEGMMDQVDRVIYDLKNNPFSRRIMTNIYVHQD 148 Query: 138 IDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 + +M L PC F V D L+ L QRS D+ +N+ Y+LL MM+A V Sbjct: 149 LHEMNLYPCAYSMTFNVTQTPGNDKLTLNAILNQRSQDILAANNWNVCQYALLLMMVAQV 208 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 + GE +H + D H+Y+ H + R P P + +NP + D F +D + + Sbjct: 209 CDMEAGELLHVVADCHIYDRHIPLIKELIQRKPYPAPVVKLNPEVKDFYQFTTDDLIVEN 268 Query: 252 YE 253 YE Sbjct: 269 YE 270 >gi|160946510|ref|ZP_02093719.1| hypothetical protein PEPMIC_00474 [Parvimonas micra ATCC 33270] gi|158447626|gb|EDP24621.1| hypothetical protein PEPMIC_00474 [Parvimonas micra ATCC 33270] Length = 276 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 13/260 (5%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++ + + +++ G D + D T T FG R++L++ FP LT +K K Sbjct: 8 FISMCKDILENGVDTKGEKVRPVWEDGTKAYTIKKFGVVNRYNLAEEFPALTLRKTAIKL 67 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 E+LW + SN + L H +WDEWAD++G +G YG Q Y + DQ+ Sbjct: 68 CTDEMLWIWQKKSNNIKDLKSH---VWDEWADENGSIGKAYGYQLGVKHKYKEGMFDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +PYSRR I + + + +M L PC F V KL+ L QRS D+ Sbjct: 125 RVIYDLKNNPYSRRIITNIYVHEDLSEMNLYPCAYSMTFNVTGNKLNAILNQRSQDILTA 184 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 +N+ Y++L MLA + GE +H + D H+Y+ H ++R P++ +N Sbjct: 185 NNWNVCQYAILIHMLARECNLEVGELVHVIADAHIYDRHVPIIKELITREKFPAPKVTLN 244 Query: 234 PNIVDLLSFRYEDFTLRSYE 253 P++ + F +D + +Y+ Sbjct: 245 PDVKNFYDFTSDDVIIENYK 264 >gi|238923626|ref|YP_002937142.1| thymidylate synthase [Eubacterium rectale ATCC 33656] gi|238875301|gb|ACR75008.1| thymidylate synthase [Eubacterium rectale ATCC 33656] gi|291525685|emb|CBK91272.1| thymidylate synthase [Eubacterium rectale DSM 17629] gi|291528190|emb|CBK93776.1| thymidylate synthase [Eubacterium rectale M104/1] Length = 282 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 117/240 (48%), Gaps = 8/240 (3%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T T FG R+DLSK FP +T +K + KS ELLW + SN +H Sbjct: 32 EDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTYIKSATDELLWIWQKKSN--NIHDLKSH 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 +WDEWAD+DG +G YG Q Y ++DQ+ ++ L+ P+SRR + + + + Sbjct: 90 VWDEWADEDGSIGKAYGYQLGVKHQYKEGMMDQVDRVIYDLKHTPFSRRILTNIYVHQDL 149 Query: 139 DKMALPPCHCLFQFYVDNGK------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 +M L PC F V K L+ L QRS DV +N+ Y++L MLA V Sbjct: 150 HEMNLYPCAYSMTFNVTQKKGDDRLTLNGILNQRSQDVLAANNWNVCQYAVLMHMLAQVC 209 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 + GE +H + D H+Y+ H + R P+ +NP+I D F +D + Y Sbjct: 210 DMRVGELVHVIADAHIYDRHVPIVKELIERPQYDAPKFWLNPDIKDFYQFTTDDIKITDY 269 >gi|148828083|ref|YP_001292836.1| thymidylate synthase [Haemophilus influenzae PittGG] gi|166231706|sp|A5UI47|TYSY_HAEIG RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148719325|gb|ABR00453.1| thymidylate synthase [Haemophilus influenzae PittGG] Length = 283 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIVSEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRELGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|332289795|ref|YP_004420647.1| thymidylate synthase [Gallibacterium anatis UMN179] gi|330432691|gb|AEC17750.1| thymidylate synthase [Gallibacterium anatis UMN179] Length = 283 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 92/284 (32%), Positives = 140/284 (49%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G RTG + + ++++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLDLCQRIIDEGVWVENQRTGKRCLTVIDASLTYNVADNEFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YGVQ RSW +G Sbjct: 61 LLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPYRKGEDDMGRVYGVQGRSWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV L R I++ +N I++ L PC F + L YQR Sbjct: 121 ETVDQLRKIVNDLSKGIDDRGEILTFYNPGEIEQGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + D QL R P Sbjct: 181 SCDVPLGLTFNQIQVFTFLALM-AQITGHKPGKAFHKIINAHIYEDQLPLMRDEQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LPQ+ INP+I L +DF + +Y+ H AI SV Sbjct: 240 YPLPQLEINPDIKTLEDLETWVTLDDFKVHNYQCHPAIKYPFSV 283 >gi|154500728|ref|ZP_02038766.1| hypothetical protein BACCAP_04406 [Bacteroides capillosus ATCC 29799] gi|150270617|gb|EDM97926.1| hypothetical protein BACCAP_04406 [Bacteroides capillosus ATCC 29799] Length = 276 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 77/236 (32%), Positives = 119/236 (50%), Gaps = 2/236 (0%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D T FG R+DL K FP+ T +K+ +KS + ELLW + SN +H I Sbjct: 33 DGASAHTIKLFGVVNRYDLKKEFPVQTIRKMAFKSSLDELLWIWQKKSN--NIHDLNSHI 90 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 WD WAD++G +G YG Q Y DQ+ ++ L+ +P SRR + + +N + Sbjct: 91 WDAWADENGSIGKAYGYQLGVKHVYPEGEFDQVDRVLYDLKHNPASRRIMTNLYNHHDLH 150 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 +MAL PC F V L+ L QRS D+ +N+ Y+ L MLA V G + GE Sbjct: 151 EMALYPCAYSMTFNVTGKTLNAILNQRSQDMLTANGWNVMQYAALVHMLARVSGLEAGEL 210 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 +H + D H+Y+ H + ++R P P++ ++ + D +F + L Y+ H Sbjct: 211 VHVIADAHIYDRHVPIVEEIIARKPYDAPKLWMDTEVDDFYAFTRDSLKLEGYQSH 266 >gi|269103430|ref|ZP_06156127.1| thymidylate synthase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163328|gb|EEZ41824.1| thymidylate synthase [Photobacterium damselae subsp. damselae CIP 102761] Length = 283 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/284 (33%), Positives = 138/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RTG + + +D++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLNLCQRIVDDGVWVENERTGKRCLTVISADLTYDVANNQFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ D ++G +YGVQ RSW DG Sbjct: 61 LLGYIRGYDNAADFRALGTKTWDMNANDNQAWLNNPHRKGDDDMGRVYGVQGRSWRKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ IV L R I++ +N D L PC F + L YQR Sbjct: 121 STLDQLRKIVDDLSRGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++LL +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTLLALM-AQITGKKPGQAYHKIINAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ+ INPNI L +DF + YE H I SV Sbjct: 240 FPSPQLKINPNIKSLEDLETWVTMDDFEVIGYEHHEPIKYPFSV 283 >gi|225572661|ref|ZP_03781416.1| hypothetical protein RUMHYD_00849 [Blautia hydrogenotrophica DSM 10507] gi|225039961|gb|EEG50207.1| hypothetical protein RUMHYD_00849 [Blautia hydrogenotrophica DSM 10507] Length = 324 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 19/268 (7%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 H ++ + + V++ G+ D T T FG R+DL K FP LT +K Sbjct: 48 HVFISMCKDVLENGTSTEGEKVRPVWEDGTAAYTIKKFGVVNRYDLRKEFPALTLRKTAL 107 Query: 53 KSVVHELLWF-LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQ 111 KS E+LW R +N+ LH H IWD WAD+ G +G YG Q +Y ++DQ Sbjct: 108 KSAFDEILWIWQRKSNNIHDLHSH---IWDSWADETGSIGKAYGYQMSVKHEYKEGMMDQ 164 Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQ 165 + ++ L+ +PYSRR + + + + +M L PC F V + L+ L Q Sbjct: 165 VDRVLYDLKNNPYSRRIMTNIYVHQDLHEMHLYPCAYSVTFNVTKEPGCEKLTLNAILNQ 224 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D+ +N+ Y+LL M A G Q GE +H + D H+Y+ H + R Sbjct: 225 RSQDILAANNWNVCQYALLVHMFAQSCGMQAGELVHVIADCHIYDRHVPVIQELIQRPVY 284 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYE 253 P + +NP + D F +D + +Y+ Sbjct: 285 PAPTVYLNPEVRDFYQFTVDDLVVENYQ 312 >gi|329122919|ref|ZP_08251490.1| thymidylate synthase [Haemophilus aegyptius ATCC 11116] gi|301169623|emb|CBW29224.1| thymidylate synthetase [Haemophilus influenzae 10810] gi|327471850|gb|EGF17290.1| thymidylate synthase [Haemophilus aegyptius ATCC 11116] Length = 283 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKTAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLVLMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|145638274|ref|ZP_01793884.1| thymidylate synthase [Haemophilus influenzae PittII] gi|148826451|ref|YP_001291204.1| thymidylate synthase [Haemophilus influenzae PittEE] gi|229845956|ref|ZP_04466068.1| thymidylate synthase [Haemophilus influenzae 7P49H1] gi|166231705|sp|A5UDH0|TYSY_HAEIE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145272603|gb|EDK12510.1| thymidylate synthase [Haemophilus influenzae PittII] gi|148716611|gb|ABQ98821.1| thymidylate synthase [Haemophilus influenzae PittEE] gi|229810960|gb|EEP46677.1| thymidylate synthase [Haemophilus influenzae 7P49H1] gi|309751428|gb|ADO81412.1| Thymidylate synthetase [Haemophilus influenzae R2866] gi|309973598|gb|ADO96799.1| Thymidylate synthetase [Haemophilus influenzae R2846] Length = 283 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIVSEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|212711211|ref|ZP_03319339.1| hypothetical protein PROVALCAL_02283 [Providencia alcalifaciens DSM 30120] gi|212686379|gb|EEB45907.1| hypothetical protein PROVALCAL_02283 [Providencia alcalifaciens DSM 30120] Length = 283 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 88/277 (31%), Positives = 136/277 (49%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G RT V + + +D+ FPL+TT+K +K+ + E Sbjct: 1 MKQYLELCQRILDEGQWVENKRTNVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+++ GE +G +YGVQ RSW DG Sbjct: 61 LLGYLRGYDNAAQFREIGCNTWNANANENQAWLDNPHRKGEDDMGRVYGVQGRSWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ +V +L+ R I++ +N + L PC F + L YQR Sbjct: 121 SHLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL+R P Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLTREPY 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 P + INP I L +DFTL Y+ H AI Sbjct: 241 PSPNLTINPEIKTLEDIETWVTTDDFTLEGYQCHEAI 277 >gi|68249491|ref|YP_248603.1| thymidylate synthase [Haemophilus influenzae 86-028NP] gi|81336082|sp|Q4QM04|TYSY_HAEI8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|68057690|gb|AAX87943.1| thymidylate synthase [Haemophilus influenzae 86-028NP] Length = 283 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 138/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+ + ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANVNAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|319775163|ref|YP_004137651.1| thymidylate synthetase [Haemophilus influenzae F3047] gi|317449754|emb|CBY85961.1| thymidylate synthetase [Haemophilus influenzae F3047] Length = 283 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 138/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+ + ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANVNAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKRAGKAYHKIVNAHIYEDQLELMRDVQLKRKP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPLPKLEINPDIKSLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|311992725|ref|YP_004009593.1| Td thymidylate synthase [Acinetobacter phage Ac42] gi|298684508|gb|ADI96469.1| Td thymidylate synthase [Acinetobacter phage Ac42] Length = 291 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 88/285 (30%), Positives = 137/285 (48%), Gaps = 21/285 (7%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Y + LR ++ G DRTGVGT + FG ++D+S+ P+LT +KV WKS+V E+ Sbjct: 7 MRDYDNALRDILDTGFHIDGDRTGVGTIAKFGVNTKYDISERVPVLTKRKVAWKSIVKEV 66 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK---------DGELGPIYGVQWRSW----PDYDG 106 LW++ G SN++ L G IW W K +G G +YG + D + Sbjct: 67 LWYISGSSNINDLEDMGAKIWTPWKSKEFETKHGLPEGSAGYVYGFNLIHFGADVKDTNP 126 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---NGK---LS 160 +Q+ ++ +LRA+P SR+ + W ++ LP CH + F V NG+ L+ Sbjct: 127 KGFNQLDYVINTLRANPKSRQACFTFWRPDTNNQAILPACHAFYSFIVSPDKNGEMNVLN 186 Query: 161 CQLYQRSGDVFLGIPF-NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 C L+QRS D +G+ NI + +L T M+A +G G H+ H+Y N + Sbjct: 187 CHLFQRSADYPIGVGMGNILTATLFTYMIAQQLGMTPGHVYHSGAHCHVYKNAIDATVEY 246 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R ++ + + EDF L Y P I ++V Sbjct: 247 LEREDEPDSPILKLNKRDSIYDYVPEDFELIDYNPLPPIKFNIAV 291 >gi|16272842|ref|NP_439065.1| thymidylate synthase [Haemophilus influenzae Rd KW20] gi|145628166|ref|ZP_01783967.1| thymidylate synthase [Haemophilus influenzae 22.1-21] gi|145629985|ref|ZP_01785767.1| thymidylate synthase [Haemophilus influenzae R3021] gi|260579995|ref|ZP_05847825.1| thymidylate synthase [Haemophilus influenzae RdAW] gi|260581732|ref|ZP_05849529.1| thymidylate synthase [Haemophilus influenzae NT127] gi|319897608|ref|YP_004135805.1| thymidylate synthetase [Haemophilus influenzae F3031] gi|1174840|sp|P44420|TYSY_HAEIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|1573924|gb|AAC22564.1| thymidylate synthetase (thyA) [Haemophilus influenzae Rd KW20] gi|144979941|gb|EDJ89600.1| thymidylate synthase [Haemophilus influenzae 22.1-21] gi|144984266|gb|EDJ91689.1| thymidylate synthase [Haemophilus influenzae R3021] gi|260093279|gb|EEW77212.1| thymidylate synthase [Haemophilus influenzae RdAW] gi|260095325|gb|EEW79216.1| thymidylate synthase [Haemophilus influenzae NT127] gi|317433114|emb|CBY81488.1| thymidylate synthetase [Haemophilus influenzae F3031] Length = 283 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|301154747|emb|CBW14210.1| thymidylate synthetase [Haemophilus parainfluenzae T3T1] Length = 283 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLSRGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGNKPGKAYHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPSPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|119469927|ref|ZP_01612732.1| thymidylate synthase [Alteromonadales bacterium TW-7] gi|119446637|gb|EAW27910.1| thymidylate synthase [Alteromonadales bacterium TW-7] Length = 283 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G RTG + + +D++ FP++TT+K ++K+ + E Sbjct: 1 MKQYLKLCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL +LRG + G WD A+ + GE +G +YGVQ R W DG Sbjct: 61 LLGYLRGYDSAEQFREIGCKTWDANANDNQAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ++ ++ +L+ R I++ +N + L PC F + L YQR Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAYHKIANAHIYENQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 P + INPNI L +DF + Y+ H AI SV Sbjct: 241 ESPTLTINPNIKSLEDIETWVTRDDFEVTGYQCHDAIQYPFSV 283 >gi|242216400|ref|XP_002474008.1| predicted protein [Postia placenta Mad-698-R] gi|220726873|gb|EED80809.1| predicted protein [Postia placenta Mad-698-R] Length = 203 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 22/187 (11%) Query: 86 KDGELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 ++G+LGP+YG QWR + DY G +DQ++ ++ +R DP RR I+SAWN A Sbjct: 31 REGDLGPVYGFQWRHFGARYTDCDADYSGQGVDQLAECIRKIREDPTDRRIILSAWNPA- 89 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 D P +LSC LYQRS D+ LGIPFNIASY+LLT ++A + + Sbjct: 90 -DAPDAP------------RRLSCLLYQRSADLGLGIPFNIASYALLTHLVAHLTQTEPH 136 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E I LGD H+Y +H + QL R+PR P + N + D+ F+ ED + Y+P+ Sbjct: 137 ELIIQLGDAHVYRDHVDALKEQLERTPRPFPTLRWNRRVEDVDDFKAEDIAVEGYQPYPP 196 Query: 258 ILAKVSV 264 I K+SV Sbjct: 197 IAMKMSV 203 >gi|221194598|ref|ZP_03567655.1| thymidylate synthase [Atopobium rimae ATCC 49626] gi|221185502|gb|EEE17892.1| thymidylate synthase [Atopobium rimae ATCC 49626] Length = 282 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 77/241 (31%), Positives = 123/241 (51%), Gaps = 8/241 (3%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T T FG R+DL + FP LT ++ KS + E+LW + SN +H Sbjct: 32 EDGTPAYTIKKFGVCNRYDLREEFPALTLRRTALKSAMDEVLWIYQKKSN--NVHDLNSH 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD+ G +G YG Q Y DQ+ ++ L+ +P+SRR + + + A + Sbjct: 90 IWDAWADESGSIGKAYGYQVGQKSHYAEGDFDQMDRVLYDLQNNPFSRRIMTNLYTFADL 149 Query: 139 DKMALPPC--HCLFQFYVDNG----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 +M L PC + ++ + G L+ L QRS D+ +N+ Y++L MM+A V Sbjct: 150 SEMNLYPCAFNAIYNVTQNPGDAKPTLNLLLVQRSQDILAANNWNVCQYAILLMMVAQVS 209 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G Q GE +H + D H+Y+ H + +SR P + +NP++ D +F +D + +Y Sbjct: 210 GMQAGELVHMISDAHIYDRHVDIVRELISRPIFAAPHVSLNPDVTDFYAFTTDDLIVENY 269 Query: 253 E 253 E Sbjct: 270 E 270 >gi|197334528|ref|YP_002155215.1| thymidylate synthase [Vibrio fischeri MJ11] gi|197316018|gb|ACH65465.1| thymidylate synthase [Vibrio fischeri MJ11] Length = 283 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D++ G FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCKRIVDEGTWIENERTGKRCLTVINADLTYDVANGQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 ++ ++RG N + G WD A+ D ++G +YGVQ R+W +G Sbjct: 61 MIGYIRGYDNAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRAWAKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ I+ L R I++ +N D L PC F + L QR Sbjct: 121 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ L ++A + G + G+ H + + H+Y + E ++QL R P Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQNVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 241 QAPIFKINPEIKSLEDLETWVTMDDFEVIGYESHDAIKYPFSV 283 >gi|328955412|ref|YP_004372745.1| thymidylate synthase [Coriobacterium glomerans PW2] gi|328455736|gb|AEB06930.1| thymidylate synthase [Coriobacterium glomerans PW2] Length = 282 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 118/240 (49%), Gaps = 10/240 (4%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGVS 78 D T +FG R+DL + FP LT ++ KS + E+LW + R +NV L+ H Sbjct: 33 DGASAYTLKSFGVTARYDLREEFPALTLRRTALKSAMDEVLWIYQRKSNNVHDLNSH--- 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD+ G +G YG Q Y DQ+ ++ L PYSRR + S + A + Sbjct: 90 IWDRWADESGSIGKAYGYQIAQLSRYPEGEFDQMDRVLYDLSHTPYSRRIMTSTYTFADL 149 Query: 139 DKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 M L PC + V D L+ L QRS DV +N+ Y+LL MM+A V Sbjct: 150 SDMHLYPCAYSCTYNVTRCPGDDALTLNMVLMQRSQDVLAANNWNVCQYALLLMMVAQVS 209 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G GE +H + D H+Y+ H E + R P++ +NP++ D +F +D + Y Sbjct: 210 GMIPGELLHVIADAHIYDRHVEIVRELIGRPRHPAPKVALNPDVTDFYAFTTDDLLVCDY 269 >gi|221133983|ref|ZP_03560288.1| thymidylate synthase [Glaciecola sp. HTCC2999] Length = 283 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 88/277 (31%), Positives = 135/277 (48%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QY DL + +I G +RTG + + ++++ FPL+TT+K +K+ + E Sbjct: 1 MRQYEDLCQRIIDEGEWVYNERTGKRCLTLINADLEYNVADNEFPLVTTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+++ ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDNAADFRAIGCNTWNANANENSAWLNNPHRKGEDDMGRVYGVQGRRWMTPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ SIV L SR I++ +N + L PC F + GKL +QR Sbjct: 121 REIDQLKSIVDDLSKGIDSRGEILTFYNPGEFEYGCLRPCMHTHHFSLLGGKLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S D+ LGI FN +L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADIPLGINFNQVQVFVLLALMAQITGHKPGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 P++ INP I L +DF + YE H I Sbjct: 241 PAPKLTINPKIKTLADIETWVTTDDFKVEGYECHEPI 277 >gi|90412457|ref|ZP_01220460.1| thymidylate synthase [Photobacterium profundum 3TCK] gi|90326494|gb|EAS42900.1| thymidylate synthase [Photobacterium profundum 3TCK] Length = 283 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 97/284 (34%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G RT + + FD++ FPL+TT+K WKS + E Sbjct: 1 MKQYLELCQRIVDDGVWIENKRTNKRCLTVVNADLTFDVANNQFPLITTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ RSW DG Sbjct: 61 LLGYIRGYDNAADFRALGTKTWDMNANDNLAWLNNPHRKGEDDMGRVYGVQGRSWQKSDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 STIDQLRKIVDNLSEGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN + Y+LL +M A + G + G H + + H+Y + D+QL+R+P Sbjct: 181 SCDVPLGLNFNQVQVYTLLALM-AQITGKKPGLAYHKIINAHIYEDQLPLLRDVQLTRTP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++IINP I L +DF + YE H AI SV Sbjct: 240 FASPKLIINPKIKSLEDLETWVTMDDFEVIGYEHHEAIKYPFSV 283 >gi|254362290|ref|ZP_04978403.1| thymidylate synthase [Mannheimia haemolytica PHL213] gi|261492795|ref|ZP_05989342.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494839|ref|ZP_05991317.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093867|gb|EDN74799.1| thymidylate synthase [Mannheimia haemolytica PHL213] gi|261309550|gb|EEY10775.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311477|gb|EEY12633.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 283 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + +D+ KG FPL+TT++ +WK+ + E Sbjct: 1 MKQYLDLCNRIVSEGKWVANERTGKHCLTVINADLTYDVEKGEFPLVTTRRSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYDG 106 LL ++RG SN + + G WD A+++ + +G +YG R++P DG Sbjct: 61 LLGYIRGYSNAADFRQLGTKSWDANANENAQWLANPYRKGEDDMGLVYGAVGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKKGIDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++IINP+I L +DF + YE H AI SV Sbjct: 240 LNAPKLIINPDIKSLEDLETWVSLDDFKVEGYEYHPAIQYPFSV 283 >gi|167623004|ref|YP_001673298.1| thymidylate synthase [Shewanella halifaxensis HAW-EB4] gi|189036944|sp|B0TIU4|TYSY_SHEHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|167353026|gb|ABZ75639.1| Thymidylate synthase [Shewanella halifaxensis HAW-EB4] Length = 283 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G+ RTG + + +++ K FPL+TT+K +K+ + E Sbjct: 1 MKQYLDLCQRIIDEGTWVENSRTGKRCLTVINADLVYNVDKNEFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G + W+ A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRKIGCNTWNANANDNQAWLNNPHRKGVDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I+S +N L PC F + L +QR Sbjct: 121 GTIDQLRKIVDDLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + E D+Q+ R P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKAGTAFHKIVNAHIYEDQLELMRDVQIKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 + P+++INP+I L +DF + YE H AI SV Sbjct: 241 SSPKLVINPDIKSLEDLETWVTMDDFEVTGYEHHEAIKYPFSV 283 >gi|315127380|ref|YP_004069383.1| thymidylate synthase [Pseudoalteromonas sp. SM9913] gi|315015894|gb|ADT69232.1| thymidylate synthase [Pseudoalteromonas sp. SM9913] Length = 283 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G RTG + + +D++ FP++TT+K ++K+ + E Sbjct: 1 MKQYLELCQRIVDQGQWIENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL +LRG + G WD A+++ ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDSAEQFRNIGCKTWDANANENSAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ++ ++ +L+ R I++ +N + L PC F + L YQR Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N + D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKITNAHIYENQLDLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + Y+ H AI SV Sbjct: 241 ASPQLKINPEIKSLEDIETWVTRDDFEVVGYQCHEAIQYPFSV 283 >gi|255281701|ref|ZP_05346256.1| thymidylate synthase [Bryantella formatexigens DSM 14469] gi|255267768|gb|EET60973.1| thymidylate synthase [Bryantella formatexigens DSM 14469] Length = 281 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 16/269 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTG--VGTRSTFGYQMRFDLSKGFPLLTTKKVHWK 53 + + R +++ G+D R + TG T FG R+DL + FP LT +++ K Sbjct: 8 FKETCRDILENGTDTRGEKVRPRWEDTGEFAYTIKKFGVVNRYDLRREFPALTLRRIALK 67 Query: 54 SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 S + E+LW + SN +H IWD+WAD+ G +G YG R Y G DQ+ Sbjct: 68 SAMDEILWIYQKKSN--NIHDLNSHIWDQWADESGSIGTCYGDVIRRKFLYKGEETDQMD 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK----LSCQLYQRSGD 169 +++ LR +PYSRR + + + + AL PC + V + L+ L QRS D Sbjct: 126 YVLRQLRENPYSRRIMTNMYQYEYLHSGALDPCCYSMTYNVTKTEEGLVLNAVLNQRSQD 185 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + +N+A Y++L MM+A V GE +H + D H+Y+ H L+R P+ Sbjct: 186 MLAANGWNVAQYAILLMMVAQVNHMIPGELVHIIADAHIYDRHVPVIRELLTREEHPAPK 245 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 + +NP + D +F D + YE I Sbjct: 246 VWLNPEVTDFYAFTTADLHVEDYETGEQI 274 >gi|261868754|ref|YP_003256676.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261414086|gb|ACX83457.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 283 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL R +I G +RTG + + +D+ + FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIIDEGVWVENERTGKRCLTVINANLTYDVVNNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ RSW +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ +N D L PC F + + L YQR Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTNTFSLLDDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAFHQIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P + INP+I L +DF + Y+ H I SV Sbjct: 240 FPSPTLEINPDIKSLADLETWVTMDDFKVTGYQCHEPIKYPFSV 283 >gi|89072546|ref|ZP_01159118.1| thymidylate synthase [Photobacterium sp. SKA34] gi|89051650|gb|EAR57103.1| thymidylate synthase [Photobacterium sp. SKA34] Length = 283 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 92/283 (32%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G +RTG + + +D++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLALCQRIVDEGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+ + GE +G +YGVQ R W DG Sbjct: 61 LLGYLRGYDNAAQFRAIGCNTWNANANDNPAWLNNPHRKGEDDMGRVYGVQGRRWQKTDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N D L PC F + L YQR Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + E D+QL R+P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKRTPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + YE H I SV Sbjct: 241 ASPQLKINPKIKSLEDLETWVTLDDFEVVGYEHHDPIQYPFSV 283 >gi|56459618|ref|YP_154899.1| thymidylate synthase [Idiomarina loihiensis L2TR] gi|62901214|sp|Q5R064|TYSY_IDILO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|56178628|gb|AAV81350.1| Thymidylate synthase [Idiomarina loihiensis L2TR] Length = 283 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 88/277 (31%), Positives = 137/277 (49%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G + +RTG+ + + +D++ FPL+TT+K ++KS + E Sbjct: 1 MKQYLQLCQRIVDEGVWVKNERTGINCLTVINADLEYDVANNQFPLITTRKSYYKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106 LL +LRG ++ + G WD A+++ GE +G +YGVQ RSW DG Sbjct: 61 LLGYLRGYNSAAQFRDIGCKTWDANANENQAWLNNPNRKGEDDMGRVYGVQGRSWQKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ ++ +L R IV+ +N + L PC F + L YQR Sbjct: 121 SHLDQLKKVINNLSKGIDDRGEIVTFYNPGEFELGCLRPCMHTHNFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y N E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFALLALVAQITGHKPGKAYHKIVNAHIYENQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAI 258 PQ+ INP I L +DF + Y+ H I Sbjct: 241 PSPQLHINPEIKSLEDIETWVSKDDFIVSGYQCHDPI 277 >gi|293390604|ref|ZP_06634938.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951138|gb|EFE01257.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 283 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R +I G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIIDEGVWVENERTGKRCLTVINANLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ RSW +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ +N D L PC F + + L YQR Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLDDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAFHQIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P + INP+I L +DF + Y+ H I SV Sbjct: 240 FPSPTLEINPDIKSLADLETWVTMDDFKVTGYQCHEPIKYPFSV 283 >gi|312884030|ref|ZP_07743747.1| thymidylate synthase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368488|gb|EFP96023.1| thymidylate synthase [Vibrio caribbenthicus ATCC BAA-2122] Length = 283 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G +RTG + + +D++ FPL+TT+K +WK+ V E Sbjct: 1 MRQYLDLCQRIVQHGEWIENERTGKRCLTVINADLTYDVANHQFPLVTTRKSYWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANQNEAWLKNAYRKGSDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ I++ L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIIEDLARGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYAFLAIVAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP+I L +DF++ YE H I SV Sbjct: 241 KAPSFQINPDIKSLEDLETWVTLDDFSVEGYEHHEPIQYPFSV 283 >gi|308234518|ref|ZP_07665255.1| thymidylate synthase [Atopobium vaginae DSM 15829] gi|328944113|ref|ZP_08241578.1| thymidylate synthase [Atopobium vaginae DSM 15829] gi|327492082|gb|EGF23856.1| thymidylate synthase [Atopobium vaginae DSM 15829] Length = 282 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 19/266 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++ + + +I+ G+ + D T T FG R+DL + FP LT ++ KS Sbjct: 8 FISMCKDIIEHGTTTQGEKVRPHWEDGTSAYTIKKFGVCNRYDLREEFPALTLRRTALKS 67 Query: 55 VVHELLW-FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + + +N+ LH H IWD WAD+ G +G YG Q Y +DQ+ Sbjct: 68 AMDEILWIYQKKSNNIHDLHSH---IWDSWADETGSIGKAYGYQIGVKNHYPEGDMDQMD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPC--HCLFQFYVDNGK----LSCQLYQRS 167 ++ L+ +PYSRR + S + A + +M L PC ++ + G L+ L QRS Sbjct: 125 KVLYDLKHNPYSRRIMTSTYTFADLSQMNLYPCAYSAIYNVTHEEGNPQPTLNMLLIQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ Y++L MM+A V Q GE +H + D H+Y+ H + ++R Sbjct: 185 QDILAANNWNVCQYAILLMMVAQVNHMQAGELVHMISDAHIYDRHVDIVKELITRPTYPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYE 253 P + +NP+I + F +D + +Y+ Sbjct: 245 PLVHLNPDIHNFYEFTTDDLIVENYQ 270 >gi|157960852|ref|YP_001500886.1| thymidylate synthase [Shewanella pealeana ATCC 700345] gi|189036945|sp|A8H1B4|TYSY_SHEPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157845852|gb|ABV86351.1| Thymidylate synthase [Shewanella pealeana ATCC 700345] Length = 283 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G+ RTG + + + + K FPL+TT+K +K+ + E Sbjct: 1 MKQYLDLCQRLIDEGTWVENSRTGKRCLTVINADLVYHVDKNEFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + G + W+ A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRAIGCNTWNANANDNQAWLDNPHRKGIDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I+S +N L PC F + L +QR Sbjct: 121 GCIDQLRKIVDDLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLVGDTLHLTSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + E ++QL R P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKPGTAFHKIVNAHIYEDQLELMQEVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 T P+++INPNI L +DF + YE H AI SV Sbjct: 241 TSPKLVINPNIKSLEDLETWVSIDDFEVTGYEHHEAISYPFSV 283 >gi|145636964|ref|ZP_01792628.1| thymidylate synthase [Haemophilus influenzae PittHH] gi|145269822|gb|EDK09761.1| thymidylate synthase [Haemophilus influenzae PittHH] Length = 283 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++ G N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIHGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|54307786|ref|YP_128806.1| thymidylate synthase [Photobacterium profundum SS9] gi|62901317|sp|Q6LUM1|TYSY_PHOPR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|46912209|emb|CAG19004.1| putative thymidylate synthetase (thyA) [Photobacterium profundum SS9] Length = 283 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/283 (33%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G RT + + FD++ FPL+TT+K WKS + E Sbjct: 1 MKQYLELCQRIVDDGVWIENKRTNKRCLTVVNADLTFDVANNQFPLITTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ RSW DG Sbjct: 61 LLGYIRGYDNAADFRALGTKTWDMNANDNLAWLNNPHRKGEDDMGRVYGVQGRSWQKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 STIDQLRKIVDNLSEGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + D+QL+R+P Sbjct: 181 SCDVPLGLNFNQVQVYTLLALVAQITGKKPGLAYHKIINAHIYEDQLSLLRDVQLTRTPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++IINP I L +DF + YE H AI SV Sbjct: 241 AAPKLIINPKIKCLEDLETWVTMDDFDVIGYEHHEAIKYPFSV 283 >gi|71658760|sp|Q5E7P1|TYSY_VIBF1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 283 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D+ G FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDEGTWIENERTGKRCLTVINADLTYDVENGVFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 ++ ++RG + + G WD A+ D ++G +YGVQ RSW +G Sbjct: 61 MIGYIRGYDSAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRSWAKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ I+ L R I++ +N D L PC F + L QR Sbjct: 121 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ L ++A + G + G+ H + + H+Y + E +QL R P Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQSVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 241 QAPIFKINPEIKSLEDLETWVTMDDFEVIGYESHEAIKYPFSV 283 >gi|32709481|gb|AAP86759.1| thymidylate synthase [Enterobacteria phage TuIa] Length = 166 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 12/166 (7%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 Q+ + ++A P RR IVSAWN A ID+MALPPCH +QF V NG L Q YQRS DV Sbjct: 1 QLVKTIDRIKALPNDRRQIVSAWNPAEIDQMALPPCHMFYQFNVRNGHLDLQWYQRSVDV 60 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 FLG+PFNIASY+ LT ++A + G+ + + G+ H+Y+NH EQ + R P+ L + Sbjct: 61 FLGLPFNIASYAALTHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCKEVIRREPKELCSL 120 Query: 231 IIN--------PNIVDL----LSFRYEDFTLRSYEPHAAILAKVSV 264 I P + + + + DF L++YE H AI AK++V Sbjct: 121 EITWPSNFENWPTKIQMDWVTGTMTHTDFVLKNYESHPAIKAKMAV 166 >gi|238695118|ref|YP_002922312.1| dTMP (thymidylate) synthase [Enterobacteria phage JSE] gi|220029254|gb|ACL78189.1| dTMP (thymidylate) synthase [Enterobacteria phage JSE] Length = 407 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 100/158 (63%), Gaps = 3/158 (1%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSG 168 DQ+ ++ ++ DPYSRR I+ +WNV L CH + QFYV N KLSC + RS Sbjct: 250 DQLQKVIDMIKNDPYSRRIIIDSWNVQETHNAVLGVCHPMVQFYVSNDNKLSCLFFMRSN 309 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+FLG PFN+ASY+LLT ++A + G + GE ++ GD H+Y NHF+Q QLSR P P Sbjct: 310 DLFLGNPFNVASYALLTHIIAKICGLEVGELVYQCGDCHIYKNHFDQVMEQLSRVPFDKP 369 Query: 229 --QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ ++ ++L+ +DF + +Y+ H AI A+++V Sbjct: 370 IIELPEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 407 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 18/120 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL LLR V+ G R DRTGVGT S FG +MR DLSKGFPLLTTKK+ SV+ ELL Sbjct: 1 MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATASVIGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------DKDG------ELGPIYGVQWRSWP 102 WF+ G + L +DE A +K+ +G +YG+ WR P Sbjct: 61 WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMAWRRKP 120 >gi|330447405|ref|ZP_08311054.1| thymidylate synthase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491596|dbj|GAA05551.1| thymidylate synthase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 283 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 92/283 (32%), Positives = 132/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G +RTG + + +D++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLALCQRIVDDGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+ + GE +G +YGVQ R W DG Sbjct: 61 LLGYLRGYDNAAQFRAIGCNTWNANANDNQAWLNNPHRKGEDDMGRVYGVQGRRWQKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N D L PC F + L YQR Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + YE H I SV Sbjct: 241 ASPQLKINPKIKSLEDLETWVTLDDFEVIGYEHHDVIQYPFSV 283 >gi|218280886|ref|ZP_03487510.1| hypothetical protein EUBIFOR_00068 [Eubacterium biforme DSM 3989] gi|218217820|gb|EEC91358.1| hypothetical protein EUBIFOR_00068 [Eubacterium biforme DSM 3989] Length = 287 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 35/282 (12%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L + +++ G +RTG+ T D+SK FP+LTTK++ + V E+LW Sbjct: 8 YCGLCKDILENGVQVHNRTGIDTIKIPSAHFHLDVSKEFPILTTKQLFIRQAVTEMLWIY 67 Query: 64 RGDSN-VSYLHRHGVSIWDEWA-DKDGE--------------------LGPIYGVQWRSW 101 + SN V +L V IWD+W ++DG+ +G YG Sbjct: 68 QAQSNDVRWLQERNVHIWDKWEINEDGDWIDENTGNVLKHFDPSFAHTIGTAYG------ 121 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 Y D ++ ++ SL+ D RR ++S W + +D LP C ++ V +GKL+ Sbjct: 122 --YIVKKYDLMNKLLNSLKNDKEDRRRVISLWQDSELDTAVLPSCVWSSEWDVTDGKLNI 179 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 ++QRS DV LG+PFN+ Y++L MM+A V G + G ++ D H+Y N + QL+ Sbjct: 180 WVHQRSCDVPLGLPFNVTQYAVLLMMVAQVTGLKPGTIDWSIKDAHIYVNQVDGIKEQLN 239 Query: 222 RSPRT----LPQMIINPNIVDLLSFR-YEDFTLRSYEPHAAI 258 R P++ +NP++ D F +D L YE I Sbjct: 240 RYETKGSLPAPELWLNPDVTDFYDFDPTKDVKLNGYEHMGKI 281 >gi|169618784|ref|XP_001802805.1| hypothetical protein SNOG_12584 [Phaeosphaeria nodorum SN15] gi|160703681|gb|EAT79882.2| hypothetical protein SNOG_12584 [Phaeosphaeria nodorum SN15] Length = 256 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 115/215 (53%), Gaps = 40/215 (18%) Query: 2 HQYLDL-LRHVIKFGSDRRDRTGVGTRS-TFGYQMRFDLSKG-----------FPLLTTK 48 +QYL+ +RH + S +GT + F Q++F LS+ PLLTTK Sbjct: 42 YQYLNHDIRHPSQMASTAPTAPALGTYALPFPPQLKFTLSRPSTDPSSPPDLILPLLTTK 101 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD + +GELGP+YG Sbjct: 102 RVFTRAVIAELLWFIAGSTHSQPLSDAGIKIWDGNGSRAYLDSVGLNHYEEGELGPVYGF 161 Query: 97 QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ ++ ++ PY RR I+SAWN A + KMALPPCH Sbjct: 162 QWRHFGAEYKGHAHDYTGEGVDQLADVIDKIKNKPYDRRIILSAWNPADLKKMALPPCHM 221 Query: 149 LFQFYVD--NGK-----LSCQLYQRSGDVFLGIPF 176 QFYV NGK L LYQRS D+ LG+PF Sbjct: 222 FAQFYVSFPNGKERRGVLHSLLYQRSCDMGLGVPF 256 >gi|261344767|ref|ZP_05972411.1| hypothetical protein PROVRUST_06031 [Providencia rustigianii DSM 4541] gi|282567211|gb|EFB72746.1| thymidylate synthase [Providencia rustigianii DSM 4541] Length = 283 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/277 (31%), Positives = 134/277 (48%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M YL+L + +I G RTGV + + +D+ FPL+TT+K +K+ + E Sbjct: 1 MKPYLELCQRIIDEGQWVENKRTGVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+++ GE +G +YGVQ R+W DG Sbjct: 61 LLGYLRGYDNAAQFREIGCNTWNANANENPAWLANPHRKGEDDMGRVYGVQGRTWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ +V +L+ R I++ +N + L PC F + L YQR Sbjct: 121 THLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R P Sbjct: 181 SCDVPLGLNFNQVQCFVLLALIARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPY 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 P++ INP I L +DF L Y+ H AI Sbjct: 241 PSPRLTINPEIKTLEDLETWVTTDDFMLDGYQCHEAI 277 >gi|139436967|ref|ZP_01771127.1| Hypothetical protein COLAER_00100 [Collinsella aerofaciens ATCC 25986] gi|133776614|gb|EBA40434.1| Hypothetical protein COLAER_00100 [Collinsella aerofaciens ATCC 25986] Length = 282 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 17/267 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 Q++ + R ++ G+ D T T FG R+DL + FP LT ++ Sbjct: 6 QQFVAMCRDILDHGTTTEGQKVRPVWEDGTPAYTIKNFGVTARYDLREEFPALTLRRTAL 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS + E+LW + SN +H IWDEWAD+ G +G YG Q Y DQ+ Sbjct: 66 KSAMDEILWIYQKKSN--NVHDLNSHIWDEWADETGSIGKAYGYQIGQKSHYAEGDFDQM 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQR 166 ++ L+ PYSRR + + + + + +M L PC + V D L+ L QR Sbjct: 124 DRVLYDLKHTPYSRRIMTNTYVFSDLSEMHLYPCAYSVTYNVTQRPQDDKPTLNMILNQR 183 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S D+ +N+ Y++L MM+A + GE +H + D H+Y+ H + + R Sbjct: 184 SQDILAANNWNVCQYAILLMMVAQSVDMIPGELLHVIADAHIYDRHVDIVRELIERPQFA 243 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYE 253 P++ +NP++ D +F +D + YE Sbjct: 244 APKVTLNPDVHDFYAFTTDDLIVEGYE 270 >gi|251791893|ref|YP_003006613.1| thymidylate synthase [Aggregatibacter aphrophilus NJ8700] gi|247533280|gb|ACS96526.1| thymidylate synthase [Aggregatibacter aphrophilus NJ8700] Length = 283 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCQRIVDEGVWIENERTGKRCLTVINASLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRNWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAFHHIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ+ INP+I L +DF + Y+ H I SV Sbjct: 240 FPSPQLEINPDIKSLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283 >gi|239994617|ref|ZP_04715141.1| thymidylate synthase [Alteromonas macleodii ATCC 27126] Length = 88 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 58/88 (65%), Positives = 73/88 (82%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 +RHV G + DRTG GT S FGYQMRF+L +GFPL+TTKK H KS++HELLWFL+G++ Sbjct: 1 MRHVRDTGVKKEDRTGTGTLSVFGYQMRFNLQEGFPLVTTKKCHLKSIIHELLWFLKGET 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYG 95 N++YL HGVSIWDEWA ++GELGP+YG Sbjct: 61 NIAYLKEHGVSIWDEWATEEGELGPVYG 88 >gi|311992971|ref|YP_004009838.1| Td thymidylate synthetase [Acinetobacter phage Acj61] gi|295815260|gb|ADG36186.1| Td thymidylate synthetase [Acinetobacter phage Acj61] Length = 317 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 91/309 (29%), Positives = 144/309 (46%), Gaps = 45/309 (14%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M +Y LR +I G D DRTGVGT + FG ++D+S+ P+LT +KV WKS+V E+ Sbjct: 9 MREYDLALRDIIDNGFDIDGDRTGVGTVAKFGINTKYDISERVPVLTKRKVAWKSIVKEV 68 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK---------DGELGPIYG--------------- 95 LW++ G SN++ L G IW W K +G G +YG Sbjct: 69 LWYISGSSNINDLEAMGAKIWTPWKSKEFETKHGFVEGSAGYVYGFNLIHFGADVKQVES 128 Query: 96 ---VQWRSWPDYDGNVID----------QISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 + + + D +++D Q+ ++ +LRA+P SR+ + W ++ Sbjct: 129 RRLAEQNPFNNVDEHMLDKIYPKSKGFNQLDYVINTLRANPKSRQACFTFWRPDTNNQAI 188 Query: 143 LPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGIPF-NIASYSLLTMMLASVIGFQ 195 LP CH + F V +NG+ L+C L+QRS D +G+ NI + +L T M+A +G + Sbjct: 189 LPACHAFYSFIVSPDENGEMNVLNCHLFQRSADYPIGVGMGNIWTATLFTYMIAQQLGMK 248 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 G H+ H+Y N + L R ++ + + EDF L Y P Sbjct: 249 PGHVYHSGAHCHVYKNAIDATVEYLEREDEPDSPILKLNKRDSIYDYVPEDFELIDYNPL 308 Query: 256 AAILAKVSV 264 I ++V Sbjct: 309 PPIKFDIAV 317 >gi|254509415|ref|ZP_05121496.1| thymidylate synthase [Vibrio parahaemolyticus 16] gi|219547652|gb|EED24696.1| thymidylate synthase [Vibrio parahaemolyticus 16] Length = 283 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 91/283 (32%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + +++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVEHGEWIENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INPNI L +DF + YE H AI SV Sbjct: 241 KAPTFHINPNIKSLEDLETWVTLDDFWVEGYEHHDAIKYPFSV 283 >gi|226327104|ref|ZP_03802622.1| hypothetical protein PROPEN_00969 [Proteus penneri ATCC 35198] gi|225204322|gb|EEG86676.1| hypothetical protein PROPEN_00969 [Proteus penneri ATCC 35198] Length = 283 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 88/278 (31%), Positives = 134/278 (48%), Gaps = 21/278 (7%) Query: 1 MHQYLDLLRHVIKFGS--DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57 M QYL L + +I G D + RTG + + +D++ FPL+TT+K +K+ + Sbjct: 1 MKQYLALCQRIIDEGQWIDNK-RTGTRCLTVINADLEYDVANNQFPLITTRKSFYKAAIA 59 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYD 105 ELL +LRG N G + W+ A+++G ++G +YGVQ R W D Sbjct: 60 ELLGYLRGYDNAGQFREIGCNTWNANANENGAWLNNPHRKGEDDMGRVYGVQGRQWQRPD 119 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G+ DQ+ ++ +L R IV+ +N + L PC F + L YQ Sbjct: 120 GSHFDQLRKVIDNLTKGIDDRGEIVTFYNPGETELGCLRPCMHTHTFSLVGDTLYLTSYQ 179 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 RS DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R P Sbjct: 180 RSCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAFHKIINAHIYENQLPLMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 LP + INP I L +DFT+ Y+ H AI Sbjct: 240 LPLPTLHINPKIKTLEDIETWVTTDDFTVEGYQCHEAI 277 >gi|59711067|ref|YP_203843.1| thymidylate synthase [Vibrio fischeri ES114] gi|59479168|gb|AAW84955.1| thymidylate synthetase [Vibrio fischeri ES114] Length = 285 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 86/283 (30%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 + QYLDL + ++ G+ +RTG + + +D+ G FPL+TT+K WK+ V E Sbjct: 3 VKQYLDLCQRIVDEGTWIENERTGKRCLTVINADLTYDVENGVFPLVTTRKSFWKAAVAE 62 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 ++ ++RG + + G WD A+ D ++G +YGVQ RSW +G Sbjct: 63 MIGYIRGYDSAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRSWAKPNG 122 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ I+ L R I++ +N D L PC F + L QR Sbjct: 123 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQR 182 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ L ++A + G + G+ H + + H+Y + E +QL R P Sbjct: 183 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQSVQLKREPL 242 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 243 QAPIFKINPEIKSLEDLETWVTMDDFEVIGYESHEAIKYPFSV 285 >gi|209694165|ref|YP_002262093.1| thymidylate synthase [Aliivibrio salmonicida LFI1238] gi|208008116|emb|CAQ78258.1| thymidylate synthase [Aliivibrio salmonicida LFI1238] Length = 285 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 + QYLDL + ++ G+ +RTG + + +D++ G FPL+TT+K WKS V E Sbjct: 3 VKQYLDLCQRIVSEGTWIENERTGKRCLTVINADLTYDVANGEFPLVTTRKSFWKSAVAE 62 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 ++ ++RG N + G WD A+ + GE +G +YGVQ RSW +G Sbjct: 63 MIGYIRGYDNAEDFRQIGTKTWDANANLNNAWLNNPHRKGEDDMGRVYGVQGRSWAKPNG 122 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ I+ L R I++ +N D L PC F + L QR Sbjct: 123 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDIGCLRPCMYSHHFSLLGDTLYLNSTQR 182 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 183 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNGHIYEDQLELMKDVQLKREPL 242 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 243 KAPVFKINPKITSLEDLETWVTMDDFEVIGYESHEVIKYPFSV 285 >gi|33620591|ref|NP_891806.1| dTMP (thymidylate) synthase [Enterobacteria phage RB49] gi|33348058|gb|AAQ15459.1| dTMP (thymidylate) synthase [Enterobacteria phage RB49] Length = 410 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 2/157 (1%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++++ ++ +P RR I+ +WNV L CH QFYV+ GKLSC +QRS D Sbjct: 254 DQLQNVIEQIKNNPTDRRIIIDSWNVQGTHNAVLGVCHPFVQFYVNEGKLSCMWFQRSVD 313 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 FLG+PFN+ASY+LLT ++A + + GE I + GD H+Y NHF+Q QLSR P P Sbjct: 314 SFLGLPFNVASYALLTHIIAKMCDLEVGELIFSGGDTHIYKNHFDQVMEQLSRVPFDKPT 373 Query: 230 MIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + ++ ++L+ +DF + +Y+ H AI A+++V Sbjct: 374 IELPEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 410 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 18/120 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL LLR V+ G R DRTGVGT S FG +MR DLSKGFPLLTTKK+ SV+ ELL Sbjct: 1 MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATASVIGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------DKDG------ELGPIYGVQWRSWP 102 WF+ G + L +DE A +K+ +G +YG+ WR P Sbjct: 61 WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMAWRRKP 120 >gi|204789674|gb|ACI02050.1| hypothetical protein [uncultured bacterium] Length = 285 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 121/253 (47%), Gaps = 10/253 (3%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77 D T T FG R+DL K P++T +K KS ELLW + SN V+ L H Sbjct: 36 EDGTSAYTIKKFGVVNRYDLRKECPIITLRKTALKSATDELLWIWQKKSNNVNELSSH-- 93 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWDEWAD+ G +G YG Q Y ++DQ+ ++ L+ +P+SRR + + + Sbjct: 94 -IWDEWADETGSIGKAYGYQMGVKHQYKEGMMDQVDRVIFDLKNNPFSRRIMTNIYVHQD 152 Query: 138 IDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 + +M L PC F V D L L QRS DV +N+ Y++L MLA Sbjct: 153 LHEMNLYPCAYSMTFNVTQRKGEDKLTLHAILNQRSQDVLTANNWNVVQYAVLVHMLAQC 212 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 GEF+H + D H+Y+ H + + R P+ +NP+I D F +D + Sbjct: 213 CDMYVGEFMHVIADAHIYDRHIPLVEELIKRPVFDAPKFFMNPDIKDFYKFTKDDVWVEG 272 Query: 252 YEPHAAILAKVSV 264 Y+ I V++ Sbjct: 273 YQYGEQISIPVAI 285 >gi|149192450|ref|ZP_01870644.1| thymidylate synthase [Vibrio shilonii AK1] gi|148833716|gb|EDL50759.1| thymidylate synthase [Vibrio shilonii AK1] Length = 283 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDEGVWIENERTGKRCLTVINADLTYDVANNAFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLSKGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 AAPTFRINPKIKTLEDLETWVTLDDFEVEGYECHEPIRYPFSV 283 >gi|197286164|ref|YP_002152036.1| thymidylate synthase [Proteus mirabilis HI4320] gi|227357284|ref|ZP_03841641.1| thymidylate synthase [Proteus mirabilis ATCC 29906] gi|194683651|emb|CAR44584.1| putative thymidylate synthase [Proteus mirabilis HI4320] gi|227162547|gb|EEI47536.1| thymidylate synthase [Proteus mirabilis ATCC 29906] Length = 283 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 88/278 (31%), Positives = 136/278 (48%), Gaps = 21/278 (7%) Query: 1 MHQYLDLLRHVIKFGS--DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57 M QYL L + +I G D + RTG + + +D++ FPL+TT+K +K+ + Sbjct: 1 MKQYLALCQRIIDEGEWIDNK-RTGTRCLTVINADLEYDVANNQFPLITTRKSFYKAAIA 59 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYD 105 ELL +LRG N + G + W+ A+++ ++G +YGVQ R W D Sbjct: 60 ELLGYLRGYDNAAQFRAIGCNTWNANANENSAWLNNPHRKGEDDMGRVYGVQGRQWQRPD 119 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G+ DQ+ +V +L R IV+ +N L PC F + +L YQ Sbjct: 120 GSHFDQLRKVVDNLTNGIDDRGEIVTFYNPGETALGCLRPCMHTHTFSLLGDRLYLTSYQ 179 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 RS DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R P Sbjct: 180 RSCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAFHKIVNAHIYENQLPLMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 LP++ INPNI L +DF++ Y+ H AI Sbjct: 240 LPLPKLHINPNIKTLDDIETWVTTDDFSVEGYQCHEAI 277 >gi|315633683|ref|ZP_07888973.1| thymidylate synthase [Aggregatibacter segnis ATCC 33393] gi|315477725|gb|EFU68467.1| thymidylate synthase [Aggregatibacter segnis ATCC 33393] Length = 283 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCQRIVNEGVWVENERTGKRCLTVINAGLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ RSW +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAFHHIVNAHIYEDQLALMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ+ INP+I L +DF + Y+ H I SV Sbjct: 240 FPSPQLEINPDIKSLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283 >gi|163752421|ref|ZP_02159613.1| thymidylate synthase [Shewanella benthica KT99] gi|161327680|gb|EDP98872.1| thymidylate synthase [Shewanella benthica KT99] Length = 283 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L +I G +RTG + + +++ K FPL+TT+K WK+ + E Sbjct: 1 MKQYLELCNRIIDEGCWIENERTGKRCLTVINADLVYNVEKNEFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L ++RG N + + G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 MLGYIRGFDNAADFRKLGAKTWDANANENQAWLNNPHRKGKDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L+ R I+S +N L PC F + L +QR Sbjct: 121 GTIDQLKKIVDNLKKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGKKPGQAYHKIVNAHIYEDQLELMRDVQLQREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 + INP+I L +DF + +Y+ H AI SV Sbjct: 241 GPASLSINPDIKSLEDLETWVTMDDFEVLNYQHHDAIKYPFSV 283 >gi|157311536|ref|YP_001469579.1| Td dTMP (thymidylate) synthase [Enterobacteria phage Phi1] gi|149380740|gb|ABR24745.1| Td dTMP (thymidylate) synthase [Enterobacteria phage Phi1] Length = 406 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 2/157 (1%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++++ ++ +P RR I+ +WNV L CH QFYV+ GKLSC +QRS D Sbjct: 250 DQLQNVIEQIKNNPTDRRIIIDSWNVQGTHNAVLGVCHPFVQFYVNEGKLSCMWFQRSVD 309 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 FLG+PFN+ASY+LLT ++A + + GE I + GD H+Y NHF+Q QLSR P P Sbjct: 310 SFLGLPFNVASYALLTHIIAKMCDLEVGELIFSGGDTHIYKNHFDQVMEQLSRVPFDKPT 369 Query: 230 MIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + ++ ++L+ +DF + +Y+ H AI A+++V Sbjct: 370 IELPEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 406 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 18/120 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL LLR V+ G R DRTGVGT S FG +MR DLSKGFPLLTTKK+ SV+ ELL Sbjct: 1 MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATSSVIGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------DKDG------ELGPIYGVQWRSWP 102 WF+ G + L +DE A +K+ +G +YG+ WR P Sbjct: 61 WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMSWRRKP 120 >gi|260913764|ref|ZP_05920240.1| thymidylate synthase [Pasteurella dagmatis ATCC 43325] gi|260632303|gb|EEX50478.1| thymidylate synthase [Pasteurella dagmatis ATCC 43325] Length = 283 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 137/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCQRIVDEGVWIENKRTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+ + ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANDNEAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ +V +L R I++ N D L PC F + L YQR Sbjct: 121 ETIDQLRKVVNNLNKGIDDRGEIITFLNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E ++QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKPGKAYHKIINAHIYEDQLELMKNVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LPQ+ INP+I L +DF + Y+ H I SV Sbjct: 240 FPLPQLEINPDIKTLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283 >gi|307243541|ref|ZP_07525689.1| thymidylate synthase [Peptostreptococcus stomatis DSM 17678] gi|306493097|gb|EFM65102.1| thymidylate synthase [Peptostreptococcus stomatis DSM 17678] Length = 277 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 17/241 (7%) Query: 23 GVGTRSTFGYQM--RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR--HGV 77 G + + F Q+ R+DLSKG P++T ++V WKS + E+LW + SN L R +G+ Sbjct: 34 GTPSHTMFVNQVFERYDLSKGELPIVTLRQVAWKSGIKEILWIYQDQSNNLDLLRDKYGI 93 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + WDEW D +G YG + + D ++++L+ PY RRHI++ + A Sbjct: 94 TWWDEWDLGDRTIGQRYGATVKRYKLMD--------KLLENLKNQPYGRRHIINLYQEAD 145 Query: 138 IDKMA-LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196 +++ A L PC Q+ V +G L L QRS DV + N Y L MM+A +G Q Sbjct: 146 LEETAGLYPCAMETQWSVRDGYLDLTLIQRSSDVAVANAINKIQYVALQMMVARHVGLQA 205 Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ---MIINPNIVDLLSFRYEDFTLRSYE 253 G F H + + H+Y+ H +Q ++R P+ + +++NP+ + F +DFT+ +Y+ Sbjct: 206 GVFCHYVNNAHIYDRHIDQIKEMIARDPQEGHESVRLVLNPDKTNFYDFTLDDFTMENYD 265 Query: 254 P 254 P Sbjct: 266 P 266 >gi|127511974|ref|YP_001093171.1| thymidylate synthase [Shewanella loihica PV-4] gi|166231732|sp|A3QBR4|TYSY_SHELP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|126637269|gb|ABO22912.1| thymidylate synthase [Shewanella loihica PV-4] Length = 283 Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L +I G +RTG + + +D++ FPL+TT+K WK + E Sbjct: 1 MKQYLALCERIINEGVWVENERTGKRCLTVINADLEYDVAANEFPLITTRKSFWKGAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL +LRG N + + G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 LLGYLRGYDNAADFRKLGAKTWDANANENSAWLNNPHRKGHDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 V+DQ+ I+ +L R I+S +N L PC F + L +QR Sbjct: 121 GVVDQLRKIIDNLSKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + ++QL R P Sbjct: 181 SCDVPLGLNFNQVQVFALLSIVAQITGHKPGKAYHKIVNAHIYEDQLPLMQEVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + Y+ H AI SV Sbjct: 241 PSPKLSINPDIKSLEDLETWVTMDDFEVTGYQHHEAIQYPFSV 283 >gi|189490502|ref|YP_001957072.1| putative thymidylate synthase [Pseudomonas phage 201phi2-1] gi|164609567|gb|ABY63176.1| hypothetical protein 201phi2-1p350 [Pseudomonas phage 201phi2-1] Length = 457 Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 87/251 (34%), Positives = 113/251 (45%), Gaps = 74/251 (29%) Query: 88 GELGPIYGVQWRS-----------WPDYDGN----VIDQISSIVQS-------------- 118 G+LG +YG WR W DY+ V+D + +++ Sbjct: 207 GDLGAVYGKTWRDIEDTRVIPKYDWVDYEARGFDFVVDVPGTSIENDRCVVTRRIDQIQD 266 Query: 119 ----LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY--------------------- 153 LR +P SRR IV AW L+D+ ALPPCH FQF+ Sbjct: 267 IIDQLRTNPDSRRIIVCAWAPQLVDEQALPPCHSFFQFWTRELTVEERIKLLRTTKPEIY 326 Query: 154 ------------------VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 + +SC LYQRS D FLG PFNI YSLLT LA+ + Sbjct: 327 NVIDGTTGYFEHIADINDIPKRAISCHLYQRSVDAFLGKPFNITFYSLLTHWLANQLNMV 386 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI--VDLLSFRYEDFTLRSYE 253 EF+ T GD H+Y+NH EQ DLQL+R P+ LP + P D+ R EDF + +YE Sbjct: 387 ADEFVWTGGDCHIYSNHQEQTDLQLTREPKALPTIRFTPEAKGKDIREIRPEDFEILNYE 446 Query: 254 PHAAILAKVSV 264 H I KV+V Sbjct: 447 FHPHIAGKVAV 457 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 1/85 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 M QYLD + + + G + DRTG GT+S G Q R+ L P++TTKK+H S++HEL Sbjct: 1 MQQYLDSIIDIKENGVFKGDRTGTGTQSKLGQQERYSLRDNTLPVITTKKIHLPSIIHEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWA 84 +W L GD+ V YL +GV IW+EW Sbjct: 61 IWMLSGDTRVDYLIENGVRIWNEWV 85 >gi|18000048|gb|AAL54880.1|AF064791_1 thymidylate synthase [Pasteurella multocida] Length = 283 Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M YL+L + ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKHYLELCQRIVDEGVWVENERTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENSAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +LR R I++ +N + L PC F + L YQR Sbjct: 121 ETVDQLRKIVNNLRNGIDDRGEIMTFFNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + + ++QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIINAHIYEDQLDLMKNVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LPQ+ INP I L +DF + Y+ H AI SV Sbjct: 240 FPLPQLHINPEIKTLEDLETWVTMDDFKVTGYQCHDAIKYPFSV 283 >gi|332308159|ref|YP_004436010.1| thymidylate synthase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175488|gb|AEE24742.1| thymidylate synthase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 283 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++KG FPL+TT+K +KS + E Sbjct: 1 MKQYLDLCQRIVDEGVWVNNERTGKKCLTVINADLTYDVAKGEFPLVTTRKSFYKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106 ++ ++RG N + + G S WD A++ + + G IYG R++P DG Sbjct: 61 MIGYIRGYDNAADFRKIGTSTWDANANQNQAWLDNPHRRGEDDCGLIYGKIGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID ++ I+ L+ R I + ++ L PC F + + L QR Sbjct: 121 GSIDLLAKIIHDLKNGIDDRGEIFTFYHPGAFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ L ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGKKAGKAYHKIVNAHIYEDQLALMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 +P++IINP+I L +DF + YE H AI SV Sbjct: 241 GIPKLIINPDIKSLKDLETWVTMDDFNIEGYEHHPAIKYPFSV 283 >gi|170725592|ref|YP_001759618.1| thymidylate synthase [Shewanella woodyi ATCC 51908] gi|169810939|gb|ACA85523.1| Thymidylate synthase [Shewanella woodyi ATCC 51908] Length = 283 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL +I G+ +RTG + + ++++ FPL+TT+K WKS + E Sbjct: 1 MKQYLDLCNRIIDEGTWIENERTGKRCLTVINADLVYNVADNEFPLITTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106 +L ++RG N + + G WD A++ + ++G +YGVQ R+W DG Sbjct: 61 MLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNSHRKGEDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L+ R I+S +N L PC F + L +QR Sbjct: 121 GSVDQLRKIVDNLKNGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSMLGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFALLAIVAQITGKKAGMAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 + INP+I L +DF + Y+ H AI SV Sbjct: 241 APASLTINPDIKSLEDLETWVTMDDFEVSGYQHHDAIKYPFSV 283 >gi|90580564|ref|ZP_01236369.1| thymidylate synthase [Vibrio angustum S14] gi|90438222|gb|EAS63408.1| thymidylate synthase [Photobacterium angustum S14] Length = 286 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 128/274 (46%), Gaps = 18/274 (6%) Query: 3 QYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QY +L + VI G +RTG + + +DLSK FPL+TT+K WKS + E+L Sbjct: 7 QYENLCKRVIDEGVWIENERTGKRCLTIINADLEYDLSKNEFPLVTTRKAFWKSAIAEML 66 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDGNV 108 +LRG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 67 GYLRGYDNAADFRNIGTKTWDANANLNEAWLNNSHRKGEDDMGRVYGVQGRAWAKPDGGF 126 Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +DQ I+ +L R I+S +NV L PC F + L QRS Sbjct: 127 VDQYKKIIGNLSKGIDDRGEIMSFYNVGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQRSC 186 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV LG+ FN + L + A + G + G+ H + + H+Y + + Q+ R P + P Sbjct: 187 DVPLGLVFNQIQVAWLLQITAQICGLKAGKAFHKIVNAHIYEDQLDLMKEQIKREPYSSP 246 Query: 229 QMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 ++I+NP I L +DF + Y H I Sbjct: 247 KLIMNPKIKSLEDLETWVTVDDFEVIDYRHHEPI 280 >gi|323492567|ref|ZP_08097713.1| thymidylate synthase [Vibrio brasiliensis LMG 20546] gi|323313169|gb|EGA66287.1| thymidylate synthase [Vibrio brasiliensis LMG 20546] Length = 283 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106 LL ++RG N G WD A++ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRNLGTKTWDANANQNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 241 KAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDAIKYPFSV 283 >gi|190149384|ref|YP_001967909.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307244923|ref|ZP_07527020.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253877|ref|ZP_07535729.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258331|ref|ZP_07540072.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260572|ref|ZP_07542264.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262702|ref|ZP_07544330.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914515|gb|ACE60767.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306854088|gb|EFM86296.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863081|gb|EFM95023.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867515|gb|EFM99362.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869649|gb|EFN01434.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871957|gb|EFN03673.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 283 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + ++++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P DG Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQNSAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ + L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + G + G+ H + + H+Y + FE D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + SYE H AI SV Sbjct: 240 LASPKLWINPAIKSLEDLETWVTLDDFKVESYEYHPAIQYPFSV 283 >gi|213418917|ref|ZP_03351983.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 93 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 55/93 (59%), Positives = 79/93 (84%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 93 >gi|165975571|ref|YP_001651164.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303251939|ref|ZP_07338110.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247098|ref|ZP_07529150.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|165875672|gb|ABY68720.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649369|gb|EFL79554.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856347|gb|EFM88498.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 283 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + ++++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A++ + ++G +YG R++P DG Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQNLAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ + L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + G + G+ H + + H+Y + FE D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + SYE H AI SV Sbjct: 240 LASPKLWINPAIKSLEDLETWVTLDDFKVESYEYHPAIQYPFSV 283 >gi|90407304|ref|ZP_01215490.1| putative thymidylate synthetase (thyA) [Psychromonas sp. CNPT3] gi|90311587|gb|EAS39686.1| putative thymidylate synthetase (thyA) [Psychromonas sp. CNPT3] Length = 283 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G RT + + +D+ FP++TT+K ++S + E Sbjct: 1 MKQYLDLCKRIVEQGHWIENARTAKRCLTVINADLEYDVGNNKFPMITTRKSFYRSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+ + GE +G +YG+Q RSW ++DG Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANLNKAWLNNPVRKGEDDMGRVYGIQARSWKNHDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ +V +L+ R I++ +N D L PC F + L YQR Sbjct: 121 SHLDQLKKVVDNLKQGIDDRAEIITFYNPGEFDLGCLRPCMHTHTFSLIGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G H + + H+Y + D+QL+R P Sbjct: 181 SCDVPLGLNFNQVQVFTFLALMAQITGKKAGMAYHKIVNAHIYEDQLALMRDVQLTRQPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++IINP I L +DF++ Y+ H I SV Sbjct: 241 ASPKLIINPKIQSLEDLETWVSMDDFSIEDYQHHDPIKYPFSV 283 >gi|167856338|ref|ZP_02479067.1| thymidylate synthase [Haemophilus parasuis 29755] gi|167852534|gb|EDS23819.1| thymidylate synthase [Haemophilus parasuis 29755] Length = 283 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G +RTG + + +D++KG FPL+TT+K WK+ + E Sbjct: 1 MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLTYDVAKGAFPLVTTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P G Sbjct: 61 LLGYIRGYDNAADFRQLGTKSWDANANENAAWLANPHRKGEDDMGLVYGAVGRNFPKVGG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + G Q G+ H + + H+Y + E D+QL R+P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGLQAGQAFHKIVNAHIYEDQLELMRDVQLKRTP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P + INP+I L DF + YE H +I SV Sbjct: 240 FKAPTLKINPDIKSLEDLETWVTLADFEVEGYEYHPSIQYPFSV 283 >gi|212636535|ref|YP_002313060.1| thymidylate synthase [Shewanella piezotolerans WP3] gi|226713172|sp|B8CQK7|TYSY_SHEPW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|212558019|gb|ACJ30473.1| Thymidylate synthetase (thyA), putative [Shewanella piezotolerans WP3] Length = 283 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + +I G+ RTG + + + + K FPL+TT+K WK+ + E Sbjct: 1 MKQYLELCQRIIDEGTWVENSRTGKRCLTVINADLVYHVDKNEFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L ++RG N + G WD A+ + ++G +YGVQ R W DG Sbjct: 61 MLGYIRGYDNAADFRNIGAKTWDANANDNQAWLNNPHRKGADDMGRVYGVQGRGWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I+S +N L PC F + L +QR Sbjct: 121 GSIDQLRKIVDNLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + E +QL RSP Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGHKAGTAYHKIVNAHIYEDQLELMQSVQLKRSPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ+ INP+I L +DF + YE H I SV Sbjct: 241 PSPQLSINPDIKSLEDLETWVTMDDFEVTGYEHHEGIRYPFSV 283 >gi|52424460|ref|YP_087597.1| thymidylate synthase [Mannheimia succiniciproducens MBEL55E] gi|62901273|sp|Q65VJ8|TYSY_MANSM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|52306512|gb|AAU37012.1| ThyA protein [Mannheimia succiniciproducens MBEL55E] Length = 283 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G RTG + + +D++ FP++TT+K +WK+ + E Sbjct: 1 MRQYLDLCQRIVNEGCWIENKRTGKRCLTVINADLTYDVANNRFPIITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGAKTWDANANENQVWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ N D L PC F + L YQR Sbjct: 121 ETVDQLRKIVNNLSRGIDDRGEILTFLNPGEFDLGCLRPCMYNHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + Y+ H I SV Sbjct: 240 FPSPKLEINPDIKTLEDLETWVTMDDFNVVGYQCHEPIKYPFSV 283 >gi|303232254|ref|ZP_07318953.1| thymidylate synthase [Atopobium vaginae PB189-T1-4] gi|302481664|gb|EFL44725.1| thymidylate synthase [Atopobium vaginae PB189-T1-4] Length = 282 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/241 (32%), Positives = 115/241 (47%), Gaps = 8/241 (3%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T T FG R+DL + FP LT ++ KS V E+LW + SN +H Sbjct: 32 EDGTPAYTIKQFGVCNRYDLRQEFPALTLRRTAIKSAVDEILWIYQKKSN--NIHDLKSH 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWD WAD+ G +G YG Q Y +DQ+ ++ L +PYSRR I S + + + Sbjct: 90 IWDSWADETGSIGKAYGYQIAQVSHYPEGDMDQMDRVLFDLTHNPYSRRIITSMYTFSDL 149 Query: 139 DKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 +M L PC + V L+ L QRS D+ +N+ Y++L MM+A Sbjct: 150 SEMHLYPCAYNVIYNVTKTPNEAKPTLNMLLVQRSQDILAANNWNVCQYAVLLMMVAQAT 209 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 GE +H + D H+Y+ H +SR PQ+ +NP I + F +D + +Y Sbjct: 210 NMIPGELVHMIADAHIYDRHIPVVKELISRKEYPAPQVRLNPAITNFYDFTPDDVIVENY 269 Query: 253 E 253 E Sbjct: 270 E 270 >gi|15601944|ref|NP_245016.1| thymidylate synthase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431942|sp|P57808|TYSY_PASMU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|12720288|gb|AAK02163.1| ThyA [Pasteurella multocida subsp. multocida str. Pm70] Length = 283 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M YL+L + ++ G RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKHYLELCQRIVDEGVWVENARTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENSAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +LR R I++ +N + L PC F + L YQR Sbjct: 121 ETVDQLRKIVNNLRNGIDDRGEIMTFFNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + + ++QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIINAHIYEDQLDLMKNVQLKRDP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LPQ+ INP I L +DF + Y+ H AI SV Sbjct: 240 FPLPQLHINPEIKTLEDLETWVTMDDFKVTGYQCHDAIKYPFSV 283 >gi|296417089|ref|XP_002838196.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634113|emb|CAZ82387.1| unnamed protein product [Tuber melanosporum] Length = 293 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/285 (32%), Positives = 135/285 (47%), Gaps = 29/285 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG--FPLLTTKKVHWKSVVHEL 59 + YLDL+R+++ G R D+ GT S F + P+L+TK V K +++EL Sbjct: 16 YHYLDLVRNMLTNGEQRPDKRRAGTTSLFATPTAPPQPEKPHTPVLSTKHVFQKVILYEL 75 Query: 60 LWFLRGDSNVSYLHRHGVSIWD--------------EWADKDGELGPIYGVQWRSWPDYD 105 WF+ G +N + G I + E A +D LGP+YG Q R Sbjct: 76 FWFISGSTNNVPVSAVGAKILEGDGSRAYLDCIGLTERAQRD--LGPVYGFQLRHI---G 130 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKL 159 +D + H+ + + D +A C QFYV G L Sbjct: 131 AKYVDCHMGYPVQCKHHLRPHHHVRMESDRSGEDGVAAVSHVC--QFYVLYKDGKGEGAL 188 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 C LYQRS D+ LG+PFNIAS LLT+M+A V G + GEF T+GD + Y + + +Q Sbjct: 189 CCVLYQRSCDMGLGVPFNIASSRLLTIMIAHVCGLEPGEFRDTMGDENGYADREDTLKVQ 248 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R+PR LP IN + D+ F+ EDF ++PH I +V Sbjct: 249 LERAPRELPTAKINRQVDDIDDFKSEDFKRVGHDPHPGIKMNPAV 293 >gi|223041713|ref|ZP_03611907.1| thymidylate synthase [Actinobacillus minor 202] gi|223017457|gb|EEF15874.1| thymidylate synthase [Actinobacillus minor 202] Length = 283 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + +D+ KG FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVANERTGKRCLTVINADLTYDVEKGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL ++RG S+ + G WD A+++ ++G +YG R++P +G Sbjct: 61 LLGYIRGYSSAADFRALGTKSWDANANENSAWLANPHRKGEDDMGLVYGAIGRNYPKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L +R I + ++ + L PC F + +GKL QR Sbjct: 121 GSVDLLRQIVDDLSRGIDNRGEIYTFYHPGAFELGCLRPCLHSHHFSLLDGKLYLNSTQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHEAGQAFHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 + P++IINP I L +DF + YE H +I SV Sbjct: 240 LSAPKLIINPEIKSLEDLETWVTLDDFRVEGYEYHPSIQYPFSV 283 >gi|71279358|ref|YP_270289.1| thymidylate synthase [Colwellia psychrerythraea 34H] gi|123774868|sp|Q47Y31|TYSY_COLP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|71145098|gb|AAZ25571.1| thymidylate synthase [Colwellia psychrerythraea 34H] Length = 283 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M YLDL + +I G+ +RTG + + +++ FPL+TT+K +KS + E Sbjct: 1 MRAYLDLCQRIIDQGTWVENERTGKRCLTVINADLEYNVGNNEFPLITTRKSFFKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 + ++RG + + + G WD A+ + GE +G +YG+Q R+W DG Sbjct: 61 FIGYIRGYDSAADFRKLGTKTWDANANLNDAWLNNTHRKGEDDMGRVYGIQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L+ R I++ +N L PC F + L +QR Sbjct: 121 GTIDQLKKIVDNLKDGIDDRAEIMTFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN + ++A + G + G H + + H+Y + ++QL R P Sbjct: 181 SCDVPLGLNFNQVQVFVFLALMAQITGKKAGMAYHKIVNAHIYEDQLPLMKEVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 LP++IINP I L +DF + YE H AI Sbjct: 241 ALPKLIINPEIKSLEDLETWVTMDDFKVEGYECHEAI 277 >gi|291517888|emb|CBK73109.1| thymidylate synthase [Butyrivibrio fibrisolvens 16/4] Length = 283 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/269 (29%), Positives = 131/269 (48%), Gaps = 20/269 (7%) Query: 7 LLRHVIKFGSDRRDR--------TGVG--TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 + R +++ G+D +D TG T FG ++DL + FP LT +K KS + Sbjct: 11 MCRDILENGTDTKDEIVRPTWQDTGEKAYTIKQFGVVNKYDLREEFPALTLRKTALKSCM 70 Query: 57 HELLW-FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 E+LW + R +N+ L H +WDEWAD++G +G YG ++ G +IDQ+ + Sbjct: 71 DEVLWIYQRKSNNIHDLKPH---VWDEWADENGSIGTAYGYVVGEKFEFKGEMIDQMDYV 127 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGD 169 ++ L+ PYSRR + + + + L PC + V K L+ L QRS D Sbjct: 128 LKQLKETPYSRRIMTNLYQFHDLATGHLDPCCYSATYNVTKDKNSDKLVLNMVLNQRSQD 187 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + +N+ Y++L MM+A V G+ IH + D H+Y+ H + L R P+ Sbjct: 188 ILAANNWNVCQYAILLMMVAQVNDMIPGQLIHVIADAHIYDRHVDAIKELLERPELPAPK 247 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 + +NP + + F +D + YE I Sbjct: 248 VRLNPEVKNFYDFTTDDLIVEGYEAGEQI 276 >gi|219871597|ref|YP_002475972.1| thymidylate synthase [Haemophilus parasuis SH0165] gi|254790239|sp|B8F6S2|TYSY_HAEPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219691801|gb|ACL33024.1| thymidylate synthase [Haemophilus parasuis SH0165] Length = 283 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G +RTG + + +D++KG FPL+TT+K WK+ + E Sbjct: 1 MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLTYDVAKGEFPLVTTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P G Sbjct: 61 LLGYIRGYDNAADFRQLGTKSWDANANENAAWLTNPHRKGEDDMGLVYGAVGRNFPKVGG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + G Q G+ H + + H+Y + E D+QL R+P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHQAGQAFHKIVNAHIYEDQLELMRDVQLKRTP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P + INP+I L DF + YE H +I SV Sbjct: 240 FKAPTLKINPDIKSLEDLETWVTLADFEVEGYEYHPSIQYPFSV 283 >gi|240949099|ref|ZP_04753447.1| thymidylate synthase [Actinobacillus minor NM305] gi|240296494|gb|EER47126.1| thymidylate synthase [Actinobacillus minor NM305] Length = 283 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + +D+ KG FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVSNERTGKRCLTVINADLTYDVEKGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL ++RG S+ + G WD A+++ ++G +YG R++P +G Sbjct: 61 LLGYIRGYSSAADFRTLGTKSWDANANENSAWLANPHRKGEDDMGLVYGAIGRNFPKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L +R I + ++ + L PC F + +GKL QR Sbjct: 121 GSVDLLRQIVDDLSRGIDNRGEIYTFYHPGAFELGCLRPCLHSHHFSLLDGKLYLNSTQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHEAGQAFHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 + P++IINP I L +DF + YE H +I SV Sbjct: 240 LSAPKLIINPKIKSLEDLETWVTLDDFRVEGYEYHPSIQYPFSV 283 >gi|307249319|ref|ZP_07531313.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858613|gb|EFM90675.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 283 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + ++++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVAAGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P DG Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQNSAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ + L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + G + G+ H + + H+Y + FE D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + YE H AI SV Sbjct: 240 LASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 283 >gi|260771141|ref|ZP_05880068.1| thymidylate synthase [Vibrio furnissii CIP 102972] gi|260613738|gb|EEX38930.1| thymidylate synthase [Vibrio furnissii CIP 102972] gi|315179253|gb|ADT86167.1| thymidylate synthase [Vibrio furnissii NCTC 11218] Length = 283 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDEGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRALGTKTWDANANLNDAWLNNPHRQGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHVDQLKKIVDDLTRGVDDRGEILNFYNPGEFHLGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLALMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INPNI L +DF + YE H I SV Sbjct: 241 AAPQFHINPNIKSLHDLETWVTLDDFDVTGYEFHEPIQYPFSV 283 >gi|157374274|ref|YP_001472874.1| thymidylate synthase [Shewanella sediminis HAW-EB3] gi|189036946|sp|A8FSC3|TYSY_SHESH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157316648|gb|ABV35746.1| Thymidylate synthase [Shewanella sediminis HAW-EB3] Length = 283 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L +I G+ +RTG + + +++ FPL+TT+K WKS + E Sbjct: 1 MKQYLELCNRIIDEGTWIENERTGKRCLTVINADLTYNVGNNEFPLITTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L ++RG N + G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 MLGYIRGYDNAADFRALGAKTWDANANENQVWLNNPHRKGVDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L+A R I+S +N L PC F + L +QR Sbjct: 121 GTVDQLKKIVDNLKAGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVYTLLALIAQITGKKPGMAYHKIVNAHIYEDQLALMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 + INP+I L +DF + Y+ H AI SV Sbjct: 241 EPASLSINPDIKSLEDLETWVTMDDFEVSGYQHHEAIKYPFSV 283 >gi|260589792|ref|ZP_05855705.1| thymidylate synthase [Blautia hansenii DSM 20583] gi|331083219|ref|ZP_08332335.1| thymidylate synthase [Lachnospiraceae bacterium 6_1_63FAA] gi|260540032|gb|EEX20601.1| thymidylate synthase [Blautia hansenii DSM 20583] gi|330404608|gb|EGG84148.1| thymidylate synthase [Lachnospiraceae bacterium 6_1_63FAA] Length = 283 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 12/241 (4%) Query: 26 TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGVSIWDEWA 84 T FG R+DL K FP LT +K K+ + E+LW + R +N+ L+ H IWD WA Sbjct: 40 TIKRFGVVNRYDLRKEFPALTLRKTALKTCMDEILWIYQRKSNNIHDLNGH---IWDAWA 96 Query: 85 DKDGELGPIYG-VQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 D+DG +G YG V R + Y G DQ+ +++ L+ +PYSRR + + + + AL Sbjct: 97 DEDGSIGTCYGDVVGRKFL-YKGEETDQMDYVLKQLKENPYSRRIMTNLYQFEYLHSGAL 155 Query: 144 PPCHCLFQFYVDNGK------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 PC + V K L+ L QRS D+ +N+ Y++L MM+A V G Sbjct: 156 DPCCYSMTYNVTKEKDSEKLVLNGVLNQRSQDILAANNWNVCQYAILLMMVAQVNDMIPG 215 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E +H + D H+Y+ H + R P++ +NP + D F +D + +Y+ Sbjct: 216 ELVHVIADAHIYDRHVPVIQELIKRETFPAPKVRLNPEVKDFYQFTTDDLIVENYQAGPQ 275 Query: 258 I 258 I Sbjct: 276 I 276 >gi|28897298|ref|NP_796903.1| thymidylate synthase [Vibrio parahaemolyticus RIMD 2210633] gi|260363899|ref|ZP_05776647.1| thymidylate synthase [Vibrio parahaemolyticus K5030] gi|260876263|ref|ZP_05888618.1| thymidylate synthase [Vibrio parahaemolyticus AN-5034] gi|260897576|ref|ZP_05906072.1| thymidylate synthase [Vibrio parahaemolyticus Peru-466] gi|260901099|ref|ZP_05909494.1| thymidylate synthase [Vibrio parahaemolyticus AQ4037] gi|31077025|sp|Q87SA0|TYSY_VIBPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|28805507|dbj|BAC58787.1| thymidylate synthase [Vibrio parahaemolyticus RIMD 2210633] gi|308084906|gb|EFO34601.1| thymidylate synthase [Vibrio parahaemolyticus Peru-466] gi|308092896|gb|EFO42591.1| thymidylate synthase [Vibrio parahaemolyticus AN-5034] gi|308107467|gb|EFO45007.1| thymidylate synthase [Vibrio parahaemolyticus AQ4037] gi|308112969|gb|EFO50509.1| thymidylate synthase [Vibrio parahaemolyticus K5030] gi|328472062|gb|EGF42939.1| thymidylate synthase [Vibrio parahaemolyticus 10329] Length = 283 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYPFSV 283 >gi|152997743|ref|YP_001342578.1| thymidylate synthase [Marinomonas sp. MWYL1] gi|189036938|sp|A6W1R4|TYSY_MARMS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|150838667|gb|ABR72643.1| Thymidylate synthase [Marinomonas sp. MWYL1] Length = 283 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + +D+SKG FPL+TT+K +WKS + E Sbjct: 1 MKQYLDLCNRIVNEGEWVSNERTGKRCLTVINADLTYDVSKGEFPLVTTRKSYWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106 ++ +LRG N + G WD A++ + ++G YG R++P DG Sbjct: 61 IIGYLRGYDNAADFRALGTKTWDANANENEVWLNSPYRKGEDDMGLCYGAIGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID + I+ L +R I++ ++ L PC F + L QR Sbjct: 121 GHIDLLKQIIDDLSRGVDNRGEILTFYHPGAFHMACLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ +L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVLLAIVAQITGKKPGKAFHKIVNAHIYEDQLELMRDVQLKREPY 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP + INP I L +DF + Y+ H I SV Sbjct: 241 PLPTLKINPEIKSLKDIETWVTMDDFEIEGYQFHEPIAYPFSV 283 >gi|294139696|ref|YP_003555674.1| thymidylate synthase [Shewanella violacea DSS12] gi|293326165|dbj|BAJ00896.1| thymidylate synthase [Shewanella violacea DSS12] Length = 283 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 85/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L +I G+ +RTG + + +++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLELCNRIIDEGTWIENERTGKRCLTVINADLVYNVENNEFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 MLGYIRGFDNAADFRKLGAKTWDANANDNLAWLNNPHRKGQDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L+ R I+S +N L PC F + L +QR Sbjct: 121 GTIDQLKKIVDNLKKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGKKPGQAYHKIVNAHIYEDQLDLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 + INP+I L +DF + +Y+ H AI SV Sbjct: 241 GPASLSINPDIKSLEDLETWVTMDDFEVSNYQHHDAIKYPFSV 283 >gi|261250328|ref|ZP_05942904.1| thymidylate synthase [Vibrio orientalis CIP 102891] gi|260939444|gb|EEX95430.1| thymidylate synthase [Vibrio orientalis CIP 102891] Length = 283 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNADDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 INP I L +DF + YE H AI SV Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHEAIKYPFSV 283 >gi|331017947|gb|EGH98003.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 216 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 109/212 (51%), Gaps = 51/212 (24%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105 FLRG SN + G +WD+ A+++ + LG IYGVQWR WP Y Sbjct: 61 GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134 GNV IDQI + ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 A +D+MALP CH + D+ + + YQ+ Sbjct: 181 CAQLDEMALPACH-----FADSATPTVKKYQQ 207 >gi|86147416|ref|ZP_01065729.1| thymidylate synthase [Vibrio sp. MED222] gi|218708561|ref|YP_002416182.1| thymidylate synthase [Vibrio splendidus LGP32] gi|254790257|sp|B7VJ78|TYSY_VIBSL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|85834844|gb|EAQ52989.1| thymidylate synthase [Vibrio sp. MED222] gi|218321580|emb|CAV17532.1| Thymidylate synthase [Vibrio splendidus LGP32] Length = 283 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVNDGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD ++ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H L + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEAIKYPFSV 283 >gi|91227678|ref|ZP_01261955.1| thymidylate synthase [Vibrio alginolyticus 12G01] gi|262395196|ref|YP_003287050.1| thymidylate synthase [Vibrio sp. Ex25] gi|269966616|ref|ZP_06180697.1| thymidylate synthase [Vibrio alginolyticus 40B] gi|91188457|gb|EAS74751.1| thymidylate synthase [Vibrio alginolyticus 12G01] gi|262338790|gb|ACY52585.1| thymidylate synthase [Vibrio sp. Ex25] gi|269828801|gb|EEZ83054.1| thymidylate synthase [Vibrio alginolyticus 40B] Length = 283 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV L R I++ +N L PC F + + L QR Sbjct: 121 GHVDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 KAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYPFSV 283 >gi|32709399|gb|AAP86960.1| tymidylate synthase [Haemophilus parasuis] Length = 283 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G +RTG + + +D++KG FPL+TT+K WK+ + E Sbjct: 1 MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLIYDVAKGEFPLVTTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P G Sbjct: 61 LLGYIRGYDNAADFRQLGTKSWDANANENAAWLANPHRKGEDDMGLVYGAVGRNFPKVGG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHLGCLRPCLHSHHFSLLDGTLYLNSIQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + G Q G+ H + + H+Y + E D+QL R+P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHQAGQAFHKIVNAHIYEDQLELMRDVQLKRTP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P + INP+I L DF + YE H +I SV Sbjct: 240 FKAPTLKINPDIKSLEDLEIWVTLADFEVEGYEYHPSIQYPFSV 283 >gi|302335591|ref|YP_003800798.1| thymidylate synthase [Olsenella uli DSM 7084] gi|301319431|gb|ADK67918.1| thymidylate synthase [Olsenella uli DSM 7084] Length = 282 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 8/240 (3%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 D T T FG R+DL + FP LT ++ +S + E+LW + SN +H Sbjct: 32 EDGTPAYTIKQFGVCNRYDLREEFPALTLRRTALRSAMDEVLWIYQKKSN--NIHDLSSH 89 Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 IWDEWAD+ G +G YG Q Y +DQ+ ++ LR++PYSRR + S + A + Sbjct: 90 IWDEWADESGSIGKAYGYQIAQKSHYPEGDMDQMDRVLFDLRSNPYSRRIMTSTYTFADL 149 Query: 139 DKMALPPC--HCLFQFYVDNGK----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 +M L PC + ++ G+ L+ L QRS D+ +N+ Y++L MM+A Sbjct: 150 SEMNLYPCAFNVIYNVTQTPGEERPSLNMLLVQRSQDILAANNWNVCQYAILLMMVAQTN 209 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 GE +H + D H+Y+ H + ++R P++ + P++ D F +D + Y Sbjct: 210 DMVAGELVHMISDAHIYDRHVDIVRELIARPTYPAPKVSLRPDVHDFYDFTTDDLIVCDY 269 >gi|119944280|ref|YP_941960.1| thymidylate synthase [Psychromonas ingrahamii 37] gi|166231727|sp|A1SS96|TYSY_PSYIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119862884|gb|ABM02361.1| thymidylate synthase [Psychromonas ingrahamii 37] Length = 283 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G RTG + + +D+ FP++TT+K +KS + E Sbjct: 1 MKQYLGLCQRIVDKGIWIENQRTGKRCLTVINADLEYDVGNNQFPMITTRKSFYKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 L+ +LRG N + + G WD ++ + GE +G +YG+Q RSW DG Sbjct: 61 LIGYLRGYDNAADFRKLGTKTWDANSNLNNAWLNNPYRKGEDDMGRVYGIQGRSWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ +V L R IV+ +N + L PC F + L YQR Sbjct: 121 GFIDQLKKVVDDLSNGIDDRGEIVTFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFALLALMAQITGKKAGMAYHKIVNAHIYEDQLALMRDVQLPRLPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + Y+ H AI SV Sbjct: 241 ASPQLKINPKIKSLQDLETWVTMDDFEVEGYQCHDAIKYPFSV 283 >gi|78499355|gb|ABB45712.1| thymidylate synthetase [Ovis aries] Length = 147 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 20/147 (13%) Query: 37 DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD--------- 87 +L FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D Sbjct: 1 NLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSN 60 Query: 88 ---GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA 136 G+LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN Sbjct: 61 RAEGDLGPVYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPK 120 Query: 137 LIDKMALPPCHCLFQFYVDNGKLSCQL 163 + MALPPCH L QFYV NG+ SCQL Sbjct: 121 DLPLMALPPCHALCQFYVVNGEPSCQL 147 >gi|37678863|ref|NP_933472.1| thymidylate synthase [Vibrio vulnificus YJ016] gi|50401487|sp|Q7MNN6|TYSY_VIBVY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|37197604|dbj|BAC93443.1| thymidylate synthase [Vibrio vulnificus YJ016] Length = 283 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ D ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGDDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|153803571|ref|ZP_01958157.1| thymidylate synthase [Vibrio cholerae MZO-3] gi|124120895|gb|EAY39638.1| thymidylate synthase [Vibrio cholerae MZO-3] Length = 283 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INPN+ L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPNVKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|114564106|ref|YP_751620.1| thymidylate synthase [Shewanella frigidimarina NCIMB 400] gi|122299026|sp|Q07YY3|TYSY_SHEFN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|114335399|gb|ABI72781.1| thymidylate synthase [Shewanella frigidimarina NCIMB 400] Length = 283 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 86/277 (31%), Positives = 129/277 (46%), Gaps = 19/277 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G RT + + +D+ FPL+TT+K WKS + E Sbjct: 1 MKQYLDLCKRIVDEGEWVNNARTNKKCLTVINADLVYDVGNNQFPLVTTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDE-------WADKDGELGP-----IYGVQWRSWPDYDG 106 +L +LRG N + G WD W D GP IYG R++P DG Sbjct: 61 ILGYLRGYQNAADFRALGTKTWDANANENQAWLDNPNRKGPDDMGLIYGALGRAFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L +R I++ ++ D L PC F + L QR Sbjct: 121 GHVDLLQQIVDDLSNGIDNRGEILTFYHPGAFDLGCLRPCMYEHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ +L ++A + G + G+ H + + H+Y + E D+QL+R P Sbjct: 181 SCDVPLGLNFNMVQVYVLLALMAQITGHKPGKAYHKIVNAHIYEDQLEPMRDVQLAREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 P++IINP I L +DF++ Y+ H AI Sbjct: 241 ASPKLIINPKIKTLKDIETWVTLDDFSVEDYQHHDAI 277 >gi|126207603|ref|YP_001052828.1| thymidylate synthase [Actinobacillus pleuropneumoniae L20] gi|303249819|ref|ZP_07336023.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251642|ref|ZP_07533547.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256140|ref|ZP_07537927.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|126096395|gb|ABN73223.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302651386|gb|EFL81538.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860839|gb|EFM92847.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865321|gb|EFM97217.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 283 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + ++++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ GE +G +YG R++P DG Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQNLAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ + L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYEDQLELMRDVQLKRKP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + YE H AI SV Sbjct: 240 LASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 283 >gi|156973290|ref|YP_001444197.1| thymidylate synthase [Vibrio harveyi ATCC BAA-1116] gi|166231743|sp|A7MXJ9|TYSY_VIBHB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|156524884|gb|ABU69970.1| hypothetical protein VIBHAR_00971 [Vibrio harveyi ATCC BAA-1116] Length = 283 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ RSW DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRSWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L D R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRDVDDRGEILNFYNPGEFHIGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 INP I L +DF + YE H I SV Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|89093745|ref|ZP_01166691.1| thymidylate synthase [Oceanospirillum sp. MED92] gi|89081875|gb|EAR61101.1| thymidylate synthase [Oceanospirillum sp. MED92] Length = 283 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 132/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G +RTG + + +D++KG FP++TT+K +KS + E Sbjct: 1 MRQYLDLCQRIIDEGVWVENERTGKRCLTVINADLTYDVAKGEFPMVTTRKTFYKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 +L +LRG N + + G WD A+ + + G IYG R++P DG Sbjct: 61 MLGYLRGYDNAADFRKIGTKTWDANANDNAAWLNNPYRKGEDDCGFIYGKVGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID + IV L R I + ++ L PC F + L QR Sbjct: 121 GSIDLLRKIVDDLSQGIDDRGEIYTFYHPGAFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ L ++A + G + G+ H + + H+Y + E D+QL+R P Sbjct: 181 SCDVPLGLTFNMIQVYFLLAIMAQITGKKPGKAYHRIVNAHIYEDQVELMRDVQLTREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP INP+I L +DF + YE H AI SV Sbjct: 241 PLPTFKINPDIKTLEDLETWVTVDDFEVEGYEHHEAIQYPFSV 283 >gi|289423078|ref|ZP_06424893.1| thymidylate synthase [Peptostreptococcus anaerobius 653-L] gi|289156409|gb|EFD05059.1| thymidylate synthase [Peptostreptococcus anaerobius 653-L] Length = 277 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 15/227 (6%) Query: 35 RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELG 91 ++DLSKG P++T ++ WKS + E+LW + +N + ++G++ WDEW D +G Sbjct: 48 KYDLSKGELPIVTLRQTAWKSGIKEILWIYQDQTNDLDILKDKYGITWWDEWDIGDRTIG 107 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA-LIDKMALPPCHCLF 150 YG + + D I+ ++ L+ PY RRHI++ + A L + L PC Sbjct: 108 QRYGATVKRY--------DLINKLLDGLKNQPYGRRHIINLYQEADLAETKGLHPCAMET 159 Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 Q+ +G L L QRS D+ + N Y L MM+A +G + G F H + + H+Y+ Sbjct: 160 QWTARDGYLDMTLIQRSSDLLVANAINKIQYVALQMMVARHVGLEPGVFCHYVNNAHIYD 219 Query: 211 NHFEQADLQLSRSPRTLPQ---MIINPNIVDLLSFRYEDFTLRSYEP 254 H +QA +SR P+ + +++NP + F +DFT+ +Y P Sbjct: 220 RHIDQAKEIMSRKPQENDESVRLVLNPEKTNFYDFTIDDFTMENYNP 266 >gi|84393972|ref|ZP_00992712.1| thymidylate synthase [Vibrio splendidus 12B01] gi|84375416|gb|EAP92323.1| thymidylate synthase [Vibrio splendidus 12B01] Length = 283 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVNDGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD ++ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H L + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEVIKYPFSV 283 >gi|27363979|ref|NP_759507.1| thymidylate synthase [Vibrio vulnificus CMCP6] gi|29611889|sp|Q8DER9|TYSY_VIBVU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|27360096|gb|AAO09034.1| thymidylate synthase [Vibrio vulnificus CMCP6] Length = 283 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|15640694|ref|NP_230324.1| thymidylate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591333|ref|ZP_01678622.1| thymidylate synthase [Vibrio cholerae 2740-80] gi|153820133|ref|ZP_01972800.1| thymidylate synthase [Vibrio cholerae NCTC 8457] gi|153823743|ref|ZP_01976410.1| thymidylate synthase [Vibrio cholerae B33] gi|227080856|ref|YP_002809407.1| thymidylate synthase [Vibrio cholerae M66-2] gi|229505705|ref|ZP_04395215.1| thymidylate synthase [Vibrio cholerae BX 330286] gi|229508721|ref|ZP_04398214.1| thymidylate synthase [Vibrio cholerae B33] gi|229519529|ref|ZP_04408972.1| thymidylate synthase [Vibrio cholerae RC9] gi|229608724|ref|YP_002879372.1| thymidylate synthase [Vibrio cholerae MJ-1236] gi|254851007|ref|ZP_05240357.1| thymidylate synthase [Vibrio cholerae MO10] gi|255743866|ref|ZP_05417822.1| thymidylate synthase [Vibrio cholera CIRS 101] gi|262156085|ref|ZP_06029204.1| thymidylate synthase [Vibrio cholerae INDRE 91/1] gi|297580799|ref|ZP_06942725.1| thymidylate synthase [Vibrio cholerae RC385] gi|298500789|ref|ZP_07010592.1| thymidylate synthase [Vibrio cholerae MAK 757] gi|6686061|sp|O66108|TYSY_VIBCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790256|sp|C3LST0|TYSY_VIBCM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|3114981|emb|CAA76645.1| thymidilate synthase [Vibrio cholerae] gi|9655113|gb|AAF93840.1| thymidylate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546814|gb|EAX56979.1| thymidylate synthase [Vibrio cholerae 2740-80] gi|126509325|gb|EAZ71919.1| thymidylate synthase [Vibrio cholerae NCTC 8457] gi|126518737|gb|EAZ75960.1| thymidylate synthase [Vibrio cholerae B33] gi|227008744|gb|ACP04956.1| thymidylate synthase [Vibrio cholerae M66-2] gi|229344218|gb|EEO09193.1| thymidylate synthase [Vibrio cholerae RC9] gi|229354245|gb|EEO19175.1| thymidylate synthase [Vibrio cholerae B33] gi|229357928|gb|EEO22845.1| thymidylate synthase [Vibrio cholerae BX 330286] gi|229371379|gb|ACQ61802.1| thymidylate synthase [Vibrio cholerae MJ-1236] gi|254846712|gb|EET25126.1| thymidylate synthase [Vibrio cholerae MO10] gi|255738497|gb|EET93886.1| thymidylate synthase [Vibrio cholera CIRS 101] gi|262030121|gb|EEY48766.1| thymidylate synthase [Vibrio cholerae INDRE 91/1] gi|297535215|gb|EFH74050.1| thymidylate synthase [Vibrio cholerae RC385] gi|297540570|gb|EFH76628.1| thymidylate synthase [Vibrio cholerae MAK 757] gi|327483475|gb|AEA77882.1| Thymidylate synthase [Vibrio cholerae LMA3894-4] Length = 283 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|254226521|ref|ZP_04920104.1| thymidylate synthase [Vibrio cholerae V51] gi|262190229|ref|ZP_06048504.1| thymidylate synthase [Vibrio cholerae CT 5369-93] gi|125620925|gb|EAZ49276.1| thymidylate synthase [Vibrio cholerae V51] gi|262033898|gb|EEY52363.1| thymidylate synthase [Vibrio cholerae CT 5369-93] Length = 283 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|121730081|ref|ZP_01682486.1| thymidylate synthase [Vibrio cholerae V52] gi|147673512|ref|YP_001216170.1| thymidylate synthase [Vibrio cholerae O395] gi|153216952|ref|ZP_01950716.1| thymidylate synthase [Vibrio cholerae 1587] gi|153826528|ref|ZP_01979195.1| thymidylate synthase [Vibrio cholerae MZO-2] gi|262169974|ref|ZP_06037664.1| thymidylate synthase [Vibrio cholerae RC27] gi|172047693|sp|A5F8Y6|TYSY_VIBC3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|3201565|emb|CAA07073.1| thymidylate synthetase [Vibrio cholerae] gi|121628168|gb|EAX60695.1| thymidylate synthase [Vibrio cholerae V52] gi|124114017|gb|EAY32837.1| thymidylate synthase [Vibrio cholerae 1587] gi|146315395|gb|ABQ19934.1| thymidylate synthase [Vibrio cholerae O395] gi|149739708|gb|EDM53915.1| thymidylate synthase [Vibrio cholerae MZO-2] gi|227012500|gb|ACP08710.1| thymidylate synthase [Vibrio cholerae O395] gi|262021708|gb|EEY40419.1| thymidylate synthase [Vibrio cholerae RC27] Length = 283 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|153829174|ref|ZP_01981841.1| thymidylate synthase [Vibrio cholerae 623-39] gi|229530480|ref|ZP_04419868.1| thymidylate synthase [Vibrio cholerae 12129(1)] gi|148875363|gb|EDL73498.1| thymidylate synthase [Vibrio cholerae 623-39] gi|229332253|gb|EEN97741.1| thymidylate synthase [Vibrio cholerae 12129(1)] Length = 283 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQVWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|115524187|ref|YP_781098.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] gi|115518134|gb|ABJ06118.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] Length = 99 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 57/92 (61%), Positives = 72/92 (78%) Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G PFNIASY+LLTMM+A V G + G+F+HTLGD HLY+NH EQA LQL+R+PR LP M I Sbjct: 8 GKPFNIASYALLTMMVAQVTGLKPGDFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTI 67 Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NP + D+ F+YEDF L+ Y+PH I A+V+V Sbjct: 68 NPEVKDIFGFKYEDFALQGYDPHPHIKAEVAV 99 >gi|109900136|ref|YP_663391.1| thymidylate synthase [Pseudoalteromonas atlantica T6c] gi|123170603|sp|Q15P51|TYSY_PSEA6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|109702417|gb|ABG42337.1| thymidylate synthase [Pseudoalteromonas atlantica T6c] Length = 283 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +++ G FPL+TT+K +KS + E Sbjct: 1 MKQYLDLCQRIVDDGKWVNNERTGKKCLTVINADLTYNVGNGEFPLVTTRKSFYKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106 ++ ++RG N + + G S WD A++ + + G IYG R++P DG Sbjct: 61 MIGYIRGYDNAADFRKIGTSTWDANANQNQAWLDNPHRKGEDDCGLIYGKIGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID ++ I+ L+ R I + ++ L PC F + + L QR Sbjct: 121 GSIDLLAKIIYDLKNGIDDRGEIFTFYHPGAFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ L ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGKKAGMAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 +P++IINP+I L +DF++ Y H AI SV Sbjct: 241 GMPKLIINPDIKSLEDLETWVTMDDFSIEGYAHHPAIKYPFSV 283 >gi|229512935|ref|ZP_04402402.1| thymidylate synthase [Vibrio cholerae TMA 21] gi|229350184|gb|EEO15137.1| thymidylate synthase [Vibrio cholerae TMA 21] Length = 283 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|148978525|ref|ZP_01814977.1| thymidylate synthase [Vibrionales bacterium SWAT-3] gi|145962314|gb|EDK27595.1| thymidylate synthase [Vibrionales bacterium SWAT-3] Length = 283 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDNGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG + + G WD ++ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDSAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H L + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEAIKYPFSV 283 >gi|229520965|ref|ZP_04410387.1| thymidylate synthase [Vibrio cholerae TM 11079-80] gi|254291915|ref|ZP_04962697.1| thymidylate synthase [Vibrio cholerae AM-19226] gi|150422201|gb|EDN14166.1| thymidylate synthase [Vibrio cholerae AM-19226] gi|229342198|gb|EEO07194.1| thymidylate synthase [Vibrio cholerae TM 11079-80] Length = 283 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|229525326|ref|ZP_04414731.1| thymidylate synthase [Vibrio cholerae bv. albensis VL426] gi|229338907|gb|EEO03924.1| thymidylate synthase [Vibrio cholerae bv. albensis VL426] Length = 283 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|323497789|ref|ZP_08102803.1| thymidylate synthase [Vibrio sinaloensis DSM 21326] gi|323317136|gb|EGA70133.1| thymidylate synthase [Vibrio sinaloensis DSM 21326] Length = 283 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 INPNI L +DF + Y H I SV Sbjct: 241 DAATFHINPNIKSLEDLETWVTLDDFWVEGYAHHDPIQYPFSV 283 >gi|261212215|ref|ZP_05926501.1| thymidylate synthase [Vibrio sp. RC341] gi|260838823|gb|EEX65474.1| thymidylate synthase [Vibrio sp. RC341] Length = 283 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GQIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLPLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP+I L +DF + YE H AI SV Sbjct: 241 AAPQFHINPDIKTLHDLETWVTLDDFEVTGYEFHDAIQYPFSV 283 >gi|326632978|ref|YP_004306567.1| thymidylate synthase [Enterobacteria phage SPC35] gi|321272172|gb|ADW80064.1| thymidylate synthase [Enterobacteria phage SPC35] Length = 284 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 84/284 (29%), Positives = 137/284 (48%), Gaps = 20/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QY+++ + ++ G RTGV + F++ G FPL+TT+K K + E Sbjct: 1 MDQYIEVGKRILSDGQWVTNPRTGVRCLTIVDADFTFNVGAGEFPLITTRKAFAKQAIME 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 ++ +LRG + + GV+ W+ A+++ ++G +YGVQ R W + DG Sbjct: 61 MIGYLRGYDSAAQFRAIGVNTWNANANENSAWLDNPYRKGEDDMGRVYGVQGRQWTNSDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + DQ++ I +L+ R I++ WN K L PC QF + L +QR Sbjct: 121 LMFDQLAKIYHNLKKGIDDRGEILTFWNPGEFSKGCLRPCMHTHQFSILGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE--QADLQLSRSP 224 S D LG FN+ L ++A + G + G + ++H+Y + + Q R P Sbjct: 181 SNDFLLGQVFNMVQCYTLLALMAQITGLKPGIARQKIINLHIYEDQYNVLMEHKQFDRKP 240 Query: 225 RTLPQMIINPNI---VDLLSF-RYEDFTLRSYEPHAAILAKVSV 264 P + INPNI D+L++ +DFT+R YE H AI +V Sbjct: 241 FAPPTLEINPNIRTLEDVLTWVSKDDFTVRGYEHHPAIAYPFTV 284 >gi|237809696|ref|YP_002894136.1| thymidylate synthase [Tolumonas auensis DSM 9187] gi|259550815|sp|C4LD19|TYSY_TOLAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|237501957|gb|ACQ94550.1| thymidylate synthase [Tolumonas auensis DSM 9187] Length = 283 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 90/284 (31%), Positives = 136/284 (47%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + +I G RT + + +D+ + FP++TT+K WK+ + E Sbjct: 1 MKQYLDLCQRIIDEGVWIENQRTNKRCLTVINADLVYDVRNNQFPIITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+++ ++G +YGVQ R W +DG Sbjct: 61 LLGYIRGYDNAADFRALGTKSWDANANENEAWLKNPARKGLDDMGRVYGVQGRHWKTHDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ N + L PC F + L YQR Sbjct: 121 TELDQLGKIVANLSKGIDDRGEILTFHNPGEFNLGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++LL +M A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTLLALM-AQITGNKPGLAYHKIVNAHIYEDQIELMRDVQLKRKP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + Y+ H AI SV Sbjct: 240 YPSPKLEINPDIKSLKDLETWVTLDDFNVTGYQHHDAIKYPFSV 283 >gi|269959596|ref|ZP_06173977.1| thymidylate synthase [Vibrio harveyi 1DA3] gi|269835654|gb|EEZ89732.1| thymidylate synthase [Vibrio harveyi 1DA3] Length = 283 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ RSW DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRSWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 INP I L +DF + YE H I SV Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|119622127|gb|EAX01722.1| thymidylate synthetase, isoform CRA_g [Homo sapiens] Length = 186 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 20/152 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 DY G +DQ+ ++ +++ +P RR I+ AWN Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 183 >gi|320157357|ref|YP_004189736.1| thymidylate synthase [Vibrio vulnificus MO6-24/O] gi|319932669|gb|ADV87533.1| thymidylate synthase [Vibrio vulnificus MO6-24/O] Length = 283 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + ++++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYNVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|152978403|ref|YP_001344032.1| thymidylate synthase [Actinobacillus succinogenes 130Z] gi|171704255|sp|A6VMA0|TYSY_ACTSZ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|150840126|gb|ABR74097.1| Thymidylate synthase [Actinobacillus succinogenes 130Z] Length = 283 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 86/284 (30%), Positives = 135/284 (47%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G RTG + + ++ + FP++TT+K +WK+ + E Sbjct: 1 MRQYLDLCQRIVDEGVWLENQRTGKRCLTVINADLTYNAAANEFPIITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNPVRKGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV L R I++ N D L PC F + L YQR Sbjct: 121 ETVDQLRKIVDDLSRGIDDRGEILTFLNPGEFDLGCLRPCMYSHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ FN I ++ L +M A + G + G+ H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKPGQAYHKIVNAHIYEDQLDLMRDVQLKRRP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + YE H I SV Sbjct: 240 FPSPRLEINPDIKTLEDLETWVTLDDFNVVGYECHEPIKYPFSV 283 >gi|225377246|ref|ZP_03754467.1| hypothetical protein ROSEINA2194_02892 [Roseburia inulinivorans DSM 16841] gi|225210950|gb|EEG93304.1| hypothetical protein ROSEINA2194_02892 [Roseburia inulinivorans DSM 16841] Length = 265 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 17/225 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ + +++ G+ D T T FG R+DLSK FP +T +K K+ Sbjct: 8 FVDMCKDILENGTSTEGEKVRPHWEDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTAIKT 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 E+LW + SN +H ++WDEWAD+DG +G YG Q Y ++DQ+ Sbjct: 68 CTEEMLWIWQRKSN--NIHDLNSTVWDEWADEDGSIGKAYGYQLGVKHQYKEGMMDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168 ++ L+ +P+SRR + + + + +M L PC F V + + L+ L QRS Sbjct: 126 VIYDLKHNPFSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTHKEGDEKLTLNAILNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 DV +N+ Y++L MLA V Q GE +H + D H+Y+ H Sbjct: 186 DVLAANNWNVCQYAVLMHMLAQVCDMQVGELVHVIADAHIYDRHI 230 >gi|260775159|ref|ZP_05884057.1| thymidylate synthase [Vibrio coralliilyticus ATCC BAA-450] gi|260608860|gb|EEX35022.1| thymidylate synthase [Vibrio coralliilyticus ATCC BAA-450] Length = 283 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVEQGEWIENERTGKRCLTVINADLTYDVGHNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDSAEDFRKLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P+ INP+I L +DF + YE H I SV Sbjct: 241 ASPRFHINPDIKSLEDLETWVTLDDFWVEGYEYHDPIQYPFSV 283 >gi|163803536|ref|ZP_02197405.1| thymidylate synthase [Vibrio sp. AND4] gi|159172671|gb|EDP57524.1| thymidylate synthase [Vibrio sp. AND4] Length = 283 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLSYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEEFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 INP I L +DF + YE H I SV Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|94501822|ref|ZP_01308334.1| thymidylate synthase [Oceanobacter sp. RED65] gi|94426043|gb|EAT11039.1| thymidylate synthase [Oceanobacter sp. RED65] Length = 283 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G +RTG + + + + + FPL+TT+K +K+ + E Sbjct: 1 MRQYLDLCQRIIDEGVWINNERTGKRCLTVVNADLEYRVDRNEFPLVTTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDE-------WADK-----DGELGPIYGVQWRSWPDYDG 106 L ++RG + + G WD W D + ++G +YGVQ R W DG Sbjct: 61 FLGYIRGYDSAADFRNIGCKTWDANANLNDAWLDNPHRKGEDDMGRVYGVQGRRWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I+S +N L PC F + L YQR Sbjct: 121 GHIDQLRKIVDNLSKGIDDRGEIMSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVYFFLAIMAQITGHKPGVAYHKIVNAHIYEDQLELMRDVQLKRKPY 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++IINP+I L +DF + Y+ H I SV Sbjct: 241 PSPKLIINPDIKSLEDLETWVTVDDFQVEGYQYHDPIAYPFSV 283 >gi|229815429|ref|ZP_04445761.1| hypothetical protein COLINT_02477 [Collinsella intestinalis DSM 13280] gi|229808962|gb|EEP44732.1| hypothetical protein COLINT_02477 [Collinsella intestinalis DSM 13280] Length = 282 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 10/241 (4%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T T FG R+DL + FP LT ++ KS + E+LW + + +N++ L+ H Sbjct: 32 EDGTPAYTIKNFGVTNRYDLREEFPALTLRRTALKSAMDEILWIYQKKSNNINDLNSH-- 89 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWD+WAD+ G +G YG Q Y DQ+ ++ L PYSRR + + + + Sbjct: 90 -IWDQWADETGSIGKAYGYQIAQKSHYKEGDFDQMDRVLYDLTHTPYSRRIMTNMYTFSD 148 Query: 138 IDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 + +M L PC + V D L+ L QRS D+ +N+ Y++L MM+A Sbjct: 149 LSEMHLYPCAYSVTYNVTSEPGCDKPVLNMVLMQRSQDILAANNWNVCQYAILLMMVARH 208 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 GE +H + D H+Y+ H + R P++ +NP + + F ED + Sbjct: 209 CDMIAGELLHVIVDAHIYDRHVNIVRELIERPQYPAPKVSLNPEVTNFYDFTTEDLIVED 268 Query: 252 Y 252 Y Sbjct: 269 Y 269 >gi|262163913|ref|ZP_06031652.1| thymidylate synthase [Vibrio mimicus VM223] gi|262027441|gb|EEY46107.1| thymidylate synthase [Vibrio mimicus VM223] Length = 283 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLNLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + Y+ H AI SV Sbjct: 241 AAPQLHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283 >gi|332975745|gb|EGK12627.1| thymidylate synthase [Psychrobacter sp. 1501(2011)] Length = 283 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 87/284 (30%), Positives = 138/284 (48%), Gaps = 21/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +++ + FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCQRIVDEGVWVENERTGKRCLTVINADLNYNVGANEFPLVTTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG + + G + W+ A+++ ++G +YGVQ R W + G Sbjct: 61 LLGYLRGYDSAAQFRAIGCNTWNANANENEAWLANPYRKGKDDMGRVYGVQGRRWRNSVG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 DQ+ I +LR R I++ +N L PC F + GKL QR Sbjct: 121 EEFDQLHKIYDNLRNGIDDRGEILTFYNPGEFHMGCLRPCMHTHTFSLLGGKLYLTSSQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG FN I ++LL +M A + G + G+ H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGQNFNQIQVFTLLALM-AQITGHEAGKAYHKIVNAHIYEDQLQLMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + Y+ H +I SV Sbjct: 240 YPAPKLHINPEIKSLEDIETWVTLDDFRVEGYQYHESIAYPFSV 283 >gi|326794010|ref|YP_004311830.1| Thymidylate synthase [Marinomonas mediterranea MMB-1] gi|326544774|gb|ADZ89994.1| Thymidylate synthase [Marinomonas mediterranea MMB-1] Length = 283 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +++ G FPL+TT+K +WKS + E Sbjct: 1 MKQYLDLCQRILDEGVWVDNERTGKRCLTVINADLTYNVGAGEFPLVTTRKSYWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106 +L +LRG N + + G WD A++ + ++G YG R++P DG Sbjct: 61 ILGYLRGYDNAADFRQLGTKTWDANANENQVWLNNPYRKGEDDMGLCYGAIGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID + IV L+ +R I++ ++ L PC F + L QR Sbjct: 121 GSIDLLKQIVHDLKRGVDNRGEILTFYHPGAFHMACLRPCMYSHHFSLLGETLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ +L ++A + G + G H L + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVLLALVAQITGKKAGYAYHKLVNSHIYEDQLAPMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + YE H AI SV Sbjct: 241 EPPRLKINPDIKTLEDIETWVTMDDFEVEGYECHDAIQYPFSV 283 >gi|262401626|ref|ZP_06078192.1| thymidylate synthase [Vibrio sp. RC586] gi|262352043|gb|EEZ01173.1| thymidylate synthase [Vibrio sp. RC586] Length = 283 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MQQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H AI SV Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283 >gi|149911436|ref|ZP_01900053.1| thymidylate synthase [Moritella sp. PE36] gi|149805467|gb|EDM65474.1| thymidylate synthase [Moritella sp. PE36] Length = 283 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + +D++ FPL+TT+K WKS + E Sbjct: 1 MKQYLDLCNRIVSEGVWVENERTGKRCLTVINADLTYDVANNEFPLVTTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 ++ ++RG N + G WD A+ + ++G +YG R+W G Sbjct: 61 IIGYIRGYDNAADFRALGTKTWDANANDNPAWLANPHRKGKDDMGYVYGACARNWVKPQG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + I+ L +R I++ +N + L PC F + L QR Sbjct: 121 GTVDLLRQIIDDLSNGIDNRGEILTFFNPGAFELGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ +L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVHVLLALVAQITGHKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP++ INP I L +DF + Y+ H AI SV Sbjct: 241 QLPKLHINPKIKTLEDLETWVTMDDFEVTDYQHHDAIKYPFSV 283 >gi|258624715|ref|ZP_05719649.1| thymidylate synthase [Vibrio mimicus VM603] gi|258583002|gb|EEW07817.1| thymidylate synthase [Vibrio mimicus VM603] Length = 283 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H AI SV Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283 >gi|258620343|ref|ZP_05715381.1| thymidylate synthase [Vibrio mimicus VM573] gi|258587222|gb|EEW11933.1| thymidylate synthase [Vibrio mimicus VM573] Length = 283 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWTKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H AI SV Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283 >gi|229138942|ref|ZP_04267521.1| Thymidylate synthase [Bacillus cereus BDRD-ST26] gi|228644567|gb|EEL00820.1| Thymidylate synthase [Bacillus cereus BDRD-ST26] Length = 181 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 50/170 (29%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 +K G LG +YG QWR+W G +DQ+ +++ ++ Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKK 175 >gi|158079499|ref|YP_001504312.1| putative thymidylate synthase [Enterococcus phage phiEF24C] gi|157890343|dbj|BAF81471.1| putative thymidylate synthase [Enterococcus phage phiEF24C] Length = 315 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 47/276 (17%) Query: 4 YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 Y DL+ +IK G D T T+ G G PLL +K V K Sbjct: 7 YKDLVMDIIKNGVTELPEGTRAVYADGTPATTKFIEGVNFTITPDMGAPLLRSKHVGIKW 66 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGV----QWRSWPDYDGNV- 108 + EL W + SN VS+L GV+IWDEW +DG +G YG + R P Y G+V Sbjct: 67 ALTELQWIWQEMSNEVSWLKERGVTIWDEWEQEDGTIGKAYGYALFNKERFIPVYSGDVE 126 Query: 109 -------------------------------IDQISSIVQSLRADPYSRRHIVSAWNVAL 137 ++Q+ ++++ L++ P SRR + + WNV Sbjct: 127 LAKNRKAGSLIPKVVPKKGGWIAGTHQPYLKLNQVEAVIEQLKSTPNSRRIMTTLWNVED 186 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + M+L PC + V GKL+ + RS DV LG+PFNI Y L +++A+ +G + G Sbjct: 187 LYDMSLEPCVWTTHWTVVEGKLNLHVKARSSDVCLGLPFNIIQYHALQLVMANTVGLELG 246 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRS-PRTLPQMII 232 T + H+Y H E + Q++ P +P++++ Sbjct: 247 NLYWTSDNAHIYERHLELVEKQVNEPIPEEVPKLVL 282 >gi|322515113|ref|ZP_08068119.1| thymidylate synthase [Actinobacillus ureae ATCC 25976] gi|322118891|gb|EFX91076.1| thymidylate synthase [Actinobacillus ureae ATCC 25976] Length = 283 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 21/278 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + +D++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYDVANGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+++ ++G +YG R++P DG Sbjct: 61 LLGYIRGYDNAADFRNLGTKSWDVNANQNAAWLANPYRKGEDDMGLVYGAVGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID + IV L+ +R I + ++ + L PC F + +G L QR Sbjct: 121 GSIDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224 S DV LG+ +N I Y+ L +M A + + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITEHKAGQAFHKIVNAHIYEDQLELMRDVQLKREP 239 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 P++ INP I L +DF + YE H +I Sbjct: 240 LGAPKLWINPEIKSLEDLETWVTLDDFKVEDYEYHPSI 277 >gi|325847871|ref|ZP_08170093.1| thymidylate synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480889|gb|EGC83942.1| thymidylate synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 288 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 21/273 (7%) Query: 2 HQYLDLLRHVIKFGSDRRD---------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51 +Y+++ +++++ G D G + F Q KG PL++ +K+ Sbjct: 6 KKYIEIAKNILENGYDEEKLNHEVRAVWEDGESAYTKFLPQEIVRYEKGEVPLISLRKIA 65 Query: 52 WKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSW---PDYDG 106 WKS + E+LW + SN L ++ V+ WD W + +G LG YG Q P+ G Sbjct: 66 WKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNDEGNLGTAYGYQINKKFKSPE-TG 124 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 N+ +QI ++ ++ +P +RR I++ +V + M L PC L + V L+ L QR Sbjct: 125 NMTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGDYLNLTLIQR 184 Query: 167 SGDVFLGIP---FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE--QADLQLS 221 SGD N Y +L M+A V G++ G+F+H + + H+Y H + +++ Sbjct: 185 SGDFLAAAAPGGINAFQYYVLLRMIAQVTGYKAGDFVHFIQNYHIYKKHIPIVKKIMEVK 244 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 ++ P++ INP+I D F +DF L Y P Sbjct: 245 VDEKSRPRLEINPDIKDFKDFTIDDFKLLDYYP 277 >gi|262172248|ref|ZP_06039926.1| thymidylate synthase [Vibrio mimicus MB-451] gi|261893324|gb|EEY39310.1| thymidylate synthase [Vibrio mimicus MB-451] Length = 283 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLNLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H AI SV Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283 >gi|23343946|gb|AAN16904.1| mutant thymidilate synthetase [Vibrio cholerae] Length = 283 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV L + FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLWLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|260771789|ref|ZP_05880707.1| thymidylate synthase [Vibrio metschnikovii CIP 69.14] gi|260613081|gb|EEX38282.1| thymidylate synthase [Vibrio metschnikovii CIP 69.14] Length = 283 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WKS V E Sbjct: 1 MKQYLDLCQRIVDQGIWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKSAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL ++RG + + + G WD A+ + GE +G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDSAADFRQLGTKTWDANANMNAAWLANPYRQGEDDMGRVYGVQGRAWTKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAVMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKRHPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 Q INP I L +DF++ Y+ H I SV Sbjct: 241 PAAQFHINPEIRSLEDLETWVTLDDFSVTDYQHHDPIQYPFSV 283 >gi|210633178|ref|ZP_03297714.1| hypothetical protein COLSTE_01627 [Collinsella stercoris DSM 13279] gi|210159218|gb|EEA90189.1| hypothetical protein COLSTE_01627 [Collinsella stercoris DSM 13279] Length = 282 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 10/241 (4%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T T FG R+DL + FP LT ++ KS + E+LW + + +N++ L+ H Sbjct: 32 EDGTPAYTIKNFGITNRYDLREEFPALTLRRTALKSAMDEILWIYQKKSNNINDLNSH-- 89 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWD+WAD+ G +G YG Q Y DQ+ ++ L PYSRR + + + + Sbjct: 90 -IWDQWADETGSIGKAYGYQIAQKSHYREGDFDQMDRVLYDLTHTPYSRRIMTNMYTFSD 148 Query: 138 IDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 + +M L PC + V D L+ L QRS D+ +N+ Y++L MM+A Sbjct: 149 LSEMHLYPCAYSVTYNVTSEPGCDKPVLNMVLMQRSQDILAANNWNVCQYAILLMMVARH 208 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 GE +H + D H+Y+ H + + R P++ +NP + + F +D + Sbjct: 209 CDMIAGELLHVIVDAHIYDRHVDIVRELIERPQFPAPKVSLNPEVTNFYDFTTDDLIVED 268 Query: 252 Y 252 Y Sbjct: 269 Y 269 >gi|310722251|ref|YP_003969075.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4] gi|306021094|gb|ADM79629.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4] Length = 173 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 68/155 (43%), Positives = 96/155 (61%), Gaps = 17/155 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+ +I G + DRTGVGTRS FG +RFDLSKGFP T K++ + VV ELL Sbjct: 1 MIQYTDLVCDIITNGRKKTDRTGVGTRSVFGRMLRFDLSKGFPATTCKRLAFVPVVGELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WF++G +NV +L + +IWD+ +K DG LGP+YG QWR + + Sbjct: 61 WFMQGSTNVEHLRKLTYGENSDRKTIWDDNYNKQAVDLGYSDGYLGPVYGKQWRMFG--N 118 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 N +DQ+ +++ ++A+P SRR +V AWN I+K Sbjct: 119 KNPVDQLQNVIDQIKANPDSRRLLVVAWNPEDIEK 153 >gi|21700307|gb|AAM75813.1|AF450270_1 bifunctional dihydrofolate reductase-thymidylate synthase [Cercomonas longicauda] Length = 314 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/167 (40%), Positives = 91/167 (54%), Gaps = 22/167 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 +Y+DL+R + G R DRTGVG + FG M+F L G PLLT +K+ WK VV ELLW Sbjct: 148 EYIDLIRRIRDQGEIRTDRTGVGIKCVFGNMMKFSLENGQIPLLTIRKIFWKGVVEELLW 207 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101 LRG ++ L GV+IW ++ G+LGPIYG QWR + Sbjct: 208 MLRGKTHSRDLEEKGVNIWRANGSREALDRLGMVDREVGDLGPIYGWQWRHSGAXYTTAH 267 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIV-SAWNVALIDKMALPPCH 147 DY G +DQI ++ L+ P R I+ +WN + +MALPPCH Sbjct: 268 TDYSGFGVDQIKDVISQLQNQPQKNRRILFCSWNPKDLKQMALPPCH 314 >gi|212697068|ref|ZP_03305196.1| hypothetical protein ANHYDRO_01633 [Anaerococcus hydrogenalis DSM 7454] gi|212675843|gb|EEB35450.1| hypothetical protein ANHYDRO_01633 [Anaerococcus hydrogenalis DSM 7454] Length = 288 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 21/273 (7%) Query: 2 HQYLDLLRHVIKFGSDRRD---------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51 +Y+++ +++++ G D G + F Q KG PL++ +K+ Sbjct: 6 KKYIEIAKNILENGYDEEKLNHEVRAVWEDGESAYTKFLPQEIVRYEKGEVPLISLRKIA 65 Query: 52 WKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSW---PDYDG 106 WKS + E+LW + SN L ++ V+ WD W + +G LG YG Q P+ G Sbjct: 66 WKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNDEGNLGTAYGYQVNKKFKSPE-TG 124 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 N+ +QI ++ ++ +P +RR I++ +V + M L PC L + V L+ L QR Sbjct: 125 NMTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGDYLNLTLIQR 184 Query: 167 SGDVFLGIP---FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE--QADLQLS 221 SGD N Y +L M+A V G++ G+F+H + + H+Y H + +++ Sbjct: 185 SGDFLAAAAPGGINAFQYYVLLRMIAQVTGYKAGDFVHFIQNYHIYKKHIPIVKKIMEVK 244 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 ++ P + INP+I D F +DF L Y P Sbjct: 245 VDEKSRPILEINPDIKDFKDFTIDDFNLVDYYP 277 >gi|256545413|ref|ZP_05472775.1| thymidylate synthase [Anaerococcus vaginalis ATCC 51170] gi|256398809|gb|EEU12424.1| thymidylate synthase [Anaerococcus vaginalis ATCC 51170] Length = 287 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 21/273 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRT---------GVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51 +Y+ + + +++ G D + G + + Q KG PL++ +K+ Sbjct: 5 EKYIKIAKEILEKGYDEEELNKEVRPVWDDGESAYTKYLPQQVVRYEKGELPLISLRKIA 64 Query: 52 WKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSW---PDYDG 106 WKS + E+LW + SN L ++ V+ WD W ++DG LG YG Q P+ G Sbjct: 65 WKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNEDGNLGTAYGYQINKKFKSPE-TG 123 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +QI ++ ++ +P +RR I++ +V + M L PC L + V L+ L QR Sbjct: 124 QMTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGEYLNLTLVQR 183 Query: 167 SGDVFLGIP---FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLS 221 SGD N Y +L M+A V G++ G+F+H + + H+Y H L++ Sbjct: 184 SGDFLAAAAPGGINAFQYYVLLRMVAQVTGYKAGDFVHFIQNYHIYKKHIPSVKKILEIK 243 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 ++ P++ INP+I + F +DF L Y P Sbjct: 244 VDEKSKPRLEINPDIKEFKDFTIDDFKLIDYYP 276 >gi|319946995|ref|ZP_08021229.1| thymidylate synthase [Streptococcus australis ATCC 700641] gi|319747043|gb|EFV99302.1| thymidylate synthase [Streptococcus australis ATCC 700641] Length = 279 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G M FDL+KG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGTTANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKEMLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W + G +G YG + D I+ I++ L A+P++RR+I+S W+ Sbjct: 90 QVHYWNDWEVGETGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141 Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEESEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFEIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 VLEDYDP 268 >gi|254520802|ref|ZP_05132858.1| thymidylate synthase [Clostridium sp. 7_2_43FAA] gi|226914551|gb|EEH99752.1| thymidylate synthase [Clostridium sp. 7_2_43FAA] Length = 280 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 118/225 (52%), Gaps = 13/225 (5%) Query: 35 RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEW-ADKDGELG 91 ++D+SKG FP+ T + V WKS + E+LW + SN +S L G++ W +W + G +G Sbjct: 53 KYDISKGEFPITTLRPVAWKSGIKEILWIYQKASNELSVLEEMGITWWGDWEVNGTGTIG 112 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLF 150 YG + + D ++ ++ L+ +PY+RRHI+ + A ++ L PC L Sbjct: 113 QRYGATVKKY--------DLMNKLLDGLKNEPYTRRHIIDLYQYADFEETPGLNPCAFLT 164 Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 + V + L L+QRS D N Y L MM+A +G + G F+H + ++H+Y+ Sbjct: 165 VWSVRDKYLDVTLHQRSSDYCTAGHINKTQYVALMMMVARHVGLKPGVFMHVVDNLHIYD 224 Query: 211 NHFEQADLQLSRSPR-TLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 H EQA + R+P P++I+ + F +DF + YEP Sbjct: 225 RHVEQAKELIERTPSDKQPKLILKEGKTNFYDFTIDDFEMVDYEP 269 >gi|269468616|gb|EEZ80260.1| thymidylate synthase [uncultured SUP05 cluster bacterium] Length = 284 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/278 (30%), Positives = 130/278 (46%), Gaps = 20/278 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M Y+D+ + ++ G RTG T + G DLS G P++TTKK+ WK+ V E Sbjct: 1 MKTYIDIGKRILDEGEWVTNTRTGKKTLTIIGATFEHDLSDGTVPVITTKKLFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDY-D 105 +L ++RG + + G + W+ A+++ ++G YGV R++P D Sbjct: 61 MLGYIRGYRSAAQFRSIGCNTWNANANENQAWLDNPHRLGKDDMGLCYGVIGRAFPGIED 120 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ IV L RR I++ + LI + LP C F + L + YQ Sbjct: 121 DEPLDQYKKIVDDLSKGVDDRREILTFNHPNLIHRACLPACMHTHHFNLLGDNLYIESYQ 180 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ-ADLQLSRSP 224 RS D LG PFN + L ++ A + G H L ++HLY + + + Q+ R P Sbjct: 181 RSSDFALGQPFNHFQVAFLLLITAQITGKTPKTMRHHLSNIHLYEDQVDTFKNEQVEREP 240 Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258 LP+ INP+I L +DF L YE H AI Sbjct: 241 MALPKFKINPDIKTLEDLETWVTMDDFELIDYEHHPAI 278 >gi|146318488|ref|YP_001198200.1| thymidylate synthase [Streptococcus suis 05ZYH33] gi|146320681|ref|YP_001200392.1| thymidylate synthase [Streptococcus suis 98HAH33] gi|253751616|ref|YP_003024757.1| thymidylate synthase [Streptococcus suis SC84] gi|253753518|ref|YP_003026659.1| thymidylate synthase [Streptococcus suis P1/7] gi|253755657|ref|YP_003028797.1| thymidylate synthase [Streptococcus suis BM407] gi|166231739|sp|A4W0V3|TYSY_STRS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231741|sp|A4VUL1|TYSY_STRSY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145689294|gb|ABP89800.1| Thymidylate synthase [Streptococcus suis 05ZYH33] gi|145691487|gb|ABP91992.1| Thymidylate synthase [Streptococcus suis 98HAH33] gi|251815905|emb|CAZ51519.1| thymidylate synthase [Streptococcus suis SC84] gi|251818121|emb|CAZ55915.1| thymidylate synthase [Streptococcus suis BM407] gi|251819764|emb|CAR45658.1| thymidylate synthase [Streptococcus suis P1/7] gi|292558271|gb|ADE31272.1| Thymidylate synthase [Streptococcus suis GZ1] Length = 279 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/247 (31%), Positives = 131/247 (53%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + +N +S L ++ Sbjct: 30 KDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEILWIYQDQTNDLSVLQEKY 89 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 GV W++W + G +G YG + D IS I++ L +P++RR+++S W+ Sbjct: 90 GVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKILKQLEENPWNRRNVISLWD 141 Query: 135 VALIDKMA-LPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 D+ A L PC LF +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFDQSAGLLPCAFQTLFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R+P + P++++N P+ + R EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRLVLNVPDGTNFFDIRAEDF 261 Query: 248 TLRSYEP 254 L Y P Sbjct: 262 ELVDYNP 268 >gi|319758054|gb|ADV69996.1| thymidylate synthase [Streptococcus suis JS14] Length = 279 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 79/247 (31%), Positives = 130/247 (52%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + +N +S L ++ Sbjct: 30 KDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEILWIYQDQTNDLSVLQEKY 89 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 GV W++W + G +G YG + D IS I++ L P++RR+++S W+ Sbjct: 90 GVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKILKQLEEKPWNRRNVISLWD 141 Query: 135 VALIDKMA-LPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 D+ A L PC LF +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFDQSAGLLPCAFQTLFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R+P + P++++N P+ + R EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRLVLNVPDGTNFFDIRAEDF 261 Query: 248 TLRSYEP 254 L Y P Sbjct: 262 ELVDYNP 268 >gi|223932110|ref|ZP_03624114.1| Thymidylate synthase [Streptococcus suis 89/1591] gi|302023730|ref|ZP_07248941.1| thymidylate synthase [Streptococcus suis 05HAS68] gi|330832764|ref|YP_004401589.1| thymidylate synthase [Streptococcus suis ST3] gi|223899091|gb|EEF65448.1| Thymidylate synthase [Streptococcus suis 89/1591] gi|329306987|gb|AEB81403.1| thymidylate synthase [Streptococcus suis ST3] Length = 279 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 25/250 (10%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + +N +S L ++ Sbjct: 30 KDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEILWIYQDQTNDLSVLQEKY 89 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 GV W++W + G +G YG + D IS I++ L +P++RR+++S W+ Sbjct: 90 GVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKILKQLEENPWNRRNVISLWD 141 Query: 135 VALIDKMA--LPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTM 186 D+ A LP C FQ D ++ ++Y QRS D+ + N Y L M Sbjct: 142 YEAFDQSAGLLP---CAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQM 198 Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRY 244 M+A G++ G+F + + ++H+Y+N FEQA+ L R+P + P++++N P+ + R Sbjct: 199 MIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRLVLNVPDGTNFFDIRA 258 Query: 245 EDFTLRSYEP 254 EDF L Y P Sbjct: 259 EDFELVDYNP 268 >gi|257451431|ref|ZP_05616730.1| thymidylate synthase [Fusobacterium sp. 3_1_5R] gi|257466896|ref|ZP_05631207.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563] gi|315918043|ref|ZP_07914283.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563] gi|317058011|ref|ZP_07922496.1| thymidylate synthase [Fusobacterium sp. 3_1_5R] gi|313683687|gb|EFS20522.1| thymidylate synthase [Fusobacterium sp. 3_1_5R] gi|313691918|gb|EFS28753.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563] Length = 272 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/249 (32%), Positives = 123/249 (49%), Gaps = 32/249 (12%) Query: 20 DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL--LWFLRGDSNVSYLHRHG 76 D T + GYQ R D S K L+T++K WKS + EL +W+L+ + NV L G Sbjct: 31 DGTPAYYKQVVGYQFRLDNSGKEAFLITSRKAAWKSSIRELYWIWYLQSN-NVDELVDLG 89 Query: 77 VSIWDEWADKDGELGPIYG-------VQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 W+EW +DG +G YG Q++S DY ++ ++ +P SRR + Sbjct: 90 CKFWNEWKQEDGTIGKAYGYQIGKKTFQYKSQLDY----------VIGEIKNNPNSRRIL 139 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 W +DKMAL PC L Q+ V NGKL ++ QRS DV LG+ N+ Y +L ++A Sbjct: 140 TEIWVPEDLDKMALTPCVHLTQWTVLNGKLYLEVRQRSCDVALGLVANVFQYQVLHKLVA 199 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF-- 247 G+ I T+ + H+Y+ H E Q+ + P I+DL E+F Sbjct: 200 RECNLNCGDLIWTIHNAHIYDRHLEDLQKQVRETGTEKP-------ILDLGEEGLENFHQ 252 Query: 248 --TLRSYEP 254 T+ +Y+P Sbjct: 253 KVTIENYKP 261 >gi|207341205|gb|EDZ69321.1| YOR074Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 164 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/154 (45%), Positives = 89/154 (57%), Gaps = 22/154 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59 QYLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV + ++ EL Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70 Query: 60 LWFLRGDSNVSYLHRHGVSIWD-----EWADKD-------GELGPIYGVQWRSW------ 101 LWFL GD++ + L GV IWD E+ DK G+LGP+YG QWR + Sbjct: 71 LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 DY G IDQ+ ++ L+ +PY RR I+SAW Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAW 164 >gi|153840318|ref|ZP_01992985.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810] gi|149746021|gb|EDM57151.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810] Length = 255 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 111/240 (46%), Gaps = 17/240 (7%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE-- 89 FPL+TT+K WK+ V ELL ++RG N + G WD A+ + GE Sbjct: 16 FPLVTTRKSFWKAAVAELLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDD 75 Query: 90 LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 +G +YGVQ R+W DG IDQ+ IV L R I++ +N L PC Sbjct: 76 MGRVYGVQGRAWAKPDGGHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYS 135 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 F + + L QRS DV LG+ FN+ + ++A + G + G+ H + + H+Y Sbjct: 136 HHFSLLDDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIY 195 Query: 210 NNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 + E D+QL R P P INP I L +DF + YE H I SV Sbjct: 196 EDQLELMRDVQLKREPLQAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYPFSV 255 >gi|322511193|gb|ADX06506.1| putative thymidylate synthase and pyrimidine hydroxymethylase [Organic Lake phycodnavirus 2] Length = 171 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/157 (44%), Positives = 87/157 (55%), Gaps = 14/157 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYL +++ + G R G T S G M F L P+LTTKKV K+ + EL W Sbjct: 16 QYLAIVKEICLSGHKIEGRNGF-TYSKHGACMSFSLENNTLPILTTKKVALKTCLKELFW 74 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW--------PDYDGNVIDQIS 113 FL G +N L+R V IWD A+ +LGPIYG QWR + DY IDQI Sbjct: 75 FLSGSTNNDVLNRQNVHIWDPHAETSNDLGPIYGHQWRHFNAPYVDCESDYTNQGIDQIQ 134 Query: 114 SIVQSLRADP---YSRRHIVSAWNVALIDKMALPPCH 147 I+ SL DP YSRR +VS+WN +DKM+LPPCH Sbjct: 135 YIIDSLN-DPEKRYSRRLVVSSWNPCQLDKMSLPPCH 170 >gi|322385231|ref|ZP_08058878.1| thymidylate synthase [Streptococcus cristatus ATCC 51100] gi|321270855|gb|EFX53768.1| thymidylate synthase [Streptococcus cristatus ATCC 51100] Length = 279 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I I+Q L A+P++RR+I+S W+ Sbjct: 90 HVHYWNDWEVGDTGTIGQRYGAVVKKH--------DIIHKILQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N PN + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPNGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L +Y+P Sbjct: 262 ELLNYDP 268 >gi|306824917|ref|ZP_07458261.1| thymidylate synthase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433128|gb|EFM36100.1| thymidylate synthase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 279 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DL+KG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNSKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|306829804|ref|ZP_07462991.1| thymidylate synthase [Streptococcus mitis ATCC 6249] gi|304427815|gb|EFM30908.1| thymidylate synthase [Streptococcus mitis ATCC 6249] Length = 279 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNSKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLGREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|182682904|ref|YP_001837028.1| thymidylate synthase [Enterobacteria phage EPS7] gi|182630616|gb|ACB97548.1| thymidylate synthase [Enterobacteria phage EPS7] Length = 284 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 135/284 (47%), Gaps = 20/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QY++ + +++ G RTGV + F++ G PL+TT+K K + E Sbjct: 1 MKQYIETGKRILEEGVWVTNPRTGVRCLTIIDADFTFNVGAGELPLVTTRKAFAKQAIME 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106 ++ +LRG + + GV+ W+ A+++ GE +G +YGVQ R W + DG Sbjct: 61 MIGYLRGYDSAAQFRAIGVNTWNANANENIAWLGNPFRKGEDDMGRVYGVQGRHWTNSDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 V DQ++ + +L+ R I++ K L PC QF + L +QR Sbjct: 121 MVFDQLAKVYHNLKRGIDDRGEILTFGTRGEFRKGCLRPCMHTHQFSILGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE--QADLQLSRSP 224 S D LG FN+ L ++A + G + G + ++H+Y + + Q R P Sbjct: 181 SNDFLLGQVFNMVQCYALLAIMAQITGLKPGIARQKIINLHIYEDQYNVLMEHKQFDREP 240 Query: 225 RTLPQMIINPNIV---DLLSF-RYEDFTLRSYEPHAAILAKVSV 264 P + INPNI D+L++ +DFT+R YE H AI +V Sbjct: 241 FAPPTLEINPNIRTLDDVLTWVSKDDFTVRGYEHHPAIAYPFTV 284 >gi|112383430|gb|ABI17852.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] Length = 195 Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 21/147 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 49 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D G +LGP+YG QWR + Sbjct: 109 WFLRGETNAXLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRR 127 +YDG +DQI IV++++A+P RR Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195 >gi|322376984|ref|ZP_08051477.1| thymidylate synthase [Streptococcus sp. M334] gi|321282791|gb|EFX59798.1| thymidylate synthase [Streptococcus sp. M334] Length = 279 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DL+KG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEMLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG R D I+ +++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVRKH--------DIINKLLKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|112383428|gb|ABI17851.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] gi|118500801|gb|ABK97597.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] Length = 195 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 21/147 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 49 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D G +LGP+YG QWR + Sbjct: 109 WFLRGETNARLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRR 127 +YDG +DQI IV++++A+P RR Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195 >gi|157151425|ref|YP_001450432.1| thymidylate synthase [Streptococcus gordonii str. Challis substr. CH1] gi|189036950|sp|A8AXC2|TYSY_STRGC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157076219|gb|ABV10902.1| thymidylate synthase [Streptococcus gordonii str. Challis substr. CH1] Length = 279 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I+Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKILQQLAANPWNRRNIISLWD 141 Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC F V ++ L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETEGLLPCAFQTMFDVRRVDEDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELLDYDP 268 >gi|307708422|ref|ZP_07644888.1| thymidylate synthase [Streptococcus mitis NCTC 12261] gi|307615521|gb|EFN94728.1| thymidylate synthase [Streptococcus mitis NCTC 12261] Length = 279 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYMTGAFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ +++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLEANPWNRRNIISLWD 141 Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|307706250|ref|ZP_07643064.1| thymidylate synthase [Streptococcus mitis SK321] gi|307618341|gb|EFN97494.1| thymidylate synthase [Streptococcus mitis SK321] Length = 279 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DL+KG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|322391615|ref|ZP_08065084.1| thymidylate synthase [Streptococcus peroris ATCC 700780] gi|321145698|gb|EFX41090.1| thymidylate synthase [Streptococcus peroris ATCC 700780] Length = 279 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + +N + ++ Sbjct: 30 KDGTVANSKYVTGAFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQTNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I++ L A+P++RR+I+S W+ Sbjct: 90 SVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|327462282|gb|EGF08609.1| thymidylate synthase [Streptococcus sanguinis SK1] Length = 279 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I+Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKILQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDVTLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELIDYDP 268 >gi|322375542|ref|ZP_08050054.1| thymidylate synthase [Streptococcus sp. C300] gi|321279250|gb|EFX56291.1| thymidylate synthase [Streptococcus sp. C300] Length = 279 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DL+KG FP+ T + + KS + E+LW + SN + +++ Sbjct: 30 KDGTVANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNNKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 + L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEATDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|332360702|gb|EGJ38511.1| thymidylate synthase [Streptococcus sanguinis SK49] Length = 279 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I++I +Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKIGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELLDYDP 268 >gi|307706041|ref|ZP_07642862.1| thymidylate synthase [Streptococcus mitis SK564] gi|307620399|gb|EFN99514.1| thymidylate synthase [Streptococcus mitis SK564] Length = 279 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 128/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DL+KG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ +++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|293365781|ref|ZP_06612487.1| thymidylate synthase [Streptococcus oralis ATCC 35037] gi|307703351|ref|ZP_07640294.1| thymidylate synthase [Streptococcus oralis ATCC 35037] gi|291315714|gb|EFE56161.1| thymidylate synthase [Streptococcus oralis ATCC 35037] gi|307623087|gb|EFO02081.1| thymidylate synthase [Streptococcus oralis ATCC 35037] Length = 279 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + SN + L+ ++ Sbjct: 30 KDGTVANSKYVTGAFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLDVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|290580609|ref|YP_003485001.1| thymidylate synthase [Streptococcus mutans NN2025] gi|254997508|dbj|BAH88109.1| thymidylate synthase [Streptococcus mutans NN2025] Length = 279 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 128/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 ++ ++ G +DL+KG FP+ T + + KS + E+ W + +N ++ L+ ++ Sbjct: 30 KNGKTANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEVFWIYQDQTNELAILNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 GV W++W K G +G YG + D ++ I++ L +P++RR+++S W+ Sbjct: 90 GVRYWNDWEVKQTGTIGERYGAIVKKH--------DIMNKILKQLEENPWNRRNVISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 +K L PC +F NG+ L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEKTEGLLPCAFQTMFDVRRVNGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P +++N PN + + EDF Sbjct: 202 KHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPVVCQPHLVLNVPNKTNFFDIKPEDF 261 Query: 248 TLRSYEP 254 L YEP Sbjct: 262 ELLDYEP 268 >gi|324992986|gb|EGC24906.1| thymidylate synthase [Streptococcus sanguinis SK405] Length = 279 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLGLLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I+Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKILQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDVTLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELLDYDP 268 >gi|332360752|gb|EGJ38560.1| thymidylate synthase [Streptococcus sanguinis SK355] Length = 279 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 125/247 (50%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I I+Q L A+P++RR+I+S W+ Sbjct: 90 HVHYWNDWEVGDTGTIGQRYGAVVKKH--------DIIHKILQQLEANPWNRRNIISLWD 141 Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSECQPRLVLNVPDETNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELLDYDP 268 >gi|322387374|ref|ZP_08060984.1| thymidylate synthase [Streptococcus infantis ATCC 700779] gi|321141903|gb|EFX37398.1| thymidylate synthase [Streptococcus infantis ATCC 700779] Length = 279 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + +N + ++ Sbjct: 30 KDGTVANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQTNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|307704483|ref|ZP_07641392.1| thymidylate synthase [Streptococcus mitis SK597] gi|307621952|gb|EFO00980.1| thymidylate synthase [Streptococcus mitis SK597] Length = 279 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DL+KG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ +++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|112383432|gb|ABI17853.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] gi|112383434|gb|ABI17854.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] gi|112383436|gb|ABI17855.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] Length = 195 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 21/147 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT FG QMRF L PLLTTK+V W+ V ELL Sbjct: 49 RQYLELIDRIMKTGIVKEDRTGVGTIGLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101 WFLRG++N L + IWD E+ D G +LGP+YG QWR + Sbjct: 109 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168 Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRR 127 +YDG +DQI IV++++A+P RR Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195 >gi|327474155|gb|EGF19565.1| thymidylate synthase [Streptococcus sanguinis SK408] Length = 279 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNEKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I +I +Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIIHKI---LQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 VLLDYDP 268 >gi|125717921|ref|YP_001035054.1| thymidylate synthase [Streptococcus sanguinis SK36] gi|166231740|sp|A3CMU9|TYSY_STRSV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|125497838|gb|ABN44504.1| Thymidylate synthase, putative [Streptococcus sanguinis SK36] gi|324995705|gb|EGC27617.1| thymidylate synthase [Streptococcus sanguinis SK678] gi|328946147|gb|EGG40292.1| thymidylate synthase [Streptococcus sanguinis SK1087] Length = 279 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I++I +Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y P Sbjct: 262 ELLDYNP 268 >gi|24379388|ref|NP_721343.1| thymidylate synthase [Streptococcus mutans UA159] gi|62901374|sp|Q8DUI4|TYSY_STRMU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|24377318|gb|AAN58649.1|AE014935_1 thymidylate synthase [Streptococcus mutans UA159] Length = 279 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 ++ ++ G +DL+KG FP+ T + + KS + E+ W + +N ++ L+ ++ Sbjct: 30 KNGKTANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEVFWIYQDQTNELAILNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 GV W++W K G +G YG + D ++ I++ L +P++RR+++S W+ Sbjct: 90 GVRYWNDWEVKQTGTIGERYGAIVKKH--------DIMNKILKQLEENPWNRRNVISLWD 141 Query: 135 VALIDKM-ALPPCHCLFQFYVDNGK----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 +K L PC F V K L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEKTEGLLPCAFQIMFDVRRVKGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P +++N PN + + EDF Sbjct: 202 KHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPVVCQPHLVLNVPNKTNFFDIKPEDF 261 Query: 248 TLRSYEP 254 L YEP Sbjct: 262 ELLDYEP 268 >gi|325687392|gb|EGD29413.1| thymidylate synthase [Streptococcus sanguinis SK72] Length = 279 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I++I +Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y P Sbjct: 262 DLLDYNP 268 >gi|262067846|ref|ZP_06027458.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693] gi|291378569|gb|EFE86087.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693] Length = 275 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T +S GYQ R D S LLTT++ WKS + E+ W +L +NV+ L + G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSDDEAFLLTTRQCPWKSAIKEIYWIWLLQSNNVNELEKLGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 W+E+ KDG +G YG Q Q+ ++ L+ +P SRR + W Sbjct: 93 KFWNEFKLKDGTIGKSYGHQL---AKETFGYKSQLHYVINELKENPNSRRIMTEIWIPEE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A G + Sbjct: 150 LHEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E I + +VH+Y+ H+++ Q+ ++ IN N + F+ +D + +Y+ Sbjct: 210 EIIWNIHNVHIYDRHYDKLIKQVDGETFEPAKIKIN-NFKSIFDFKPDDIEVINYKYGEK 268 Query: 258 ILAKVSV 264 I ++++ Sbjct: 269 INYEIAI 275 >gi|255023190|ref|ZP_05295176.1| thymidylate synthase [Listeria monocytogenes FSL J1-208] Length = 87 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 52/84 (61%), Positives = 68/84 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWA 84 >gi|257464160|ref|ZP_05628541.1| thymidylate synthase [Fusobacterium sp. D12] gi|317061676|ref|ZP_07926161.1| thymidylate synthase [Fusobacterium sp. D12] gi|313687352|gb|EFS24187.1| thymidylate synthase [Fusobacterium sp. D12] Length = 272 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 9/215 (4%) Query: 20 DRTGVGTRSTFGYQMRFDLS--KGFPLLTTKKVHWKSVVHEL--LWFLRGDSNVSYLHRH 75 D T + GYQ R D + + F L+T++K WKS + EL +W+L+ + NV L Sbjct: 31 DGTPAYYKQIVGYQFRLDNAGDEAF-LITSRKAAWKSSIRELYWIWYLQSN-NVDELVDL 88 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 G W+EW +DG +G YG Q +Q+ ++ ++ +P SRR + W Sbjct: 89 GCKFWNEWKQEDGTIGKAYGYQI---AKKTFQYQNQLDYVIGEIKNNPNSRRILTEIWIP 145 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 +++MAL PC L Q+ V NGKL ++ QRS DV LG+ N+ Y +L ++A Sbjct: 146 EELEQMALTPCVHLTQWTVLNGKLYLEVRQRSCDVALGLVANVFQYQVLHKLVARECHLS 205 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 G+ I T+ + H+Y+ H E Q+ + R P++ Sbjct: 206 CGDLIWTIHNAHIYDRHLEDLQKQVKETGREKPRL 240 >gi|301793850|emb|CBW36243.1| thymidylate synthase [Streptococcus pneumoniae INV104] gi|332204686|gb|EGJ18751.1| thymidylate synthase [Streptococcus pneumoniae GA47901] Length = 279 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP++T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFSEYDLSKGEFPIITLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ +++ L +P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|327470119|gb|EGF15583.1| thymidylate synthase [Streptococcus sanguinis SK330] Length = 279 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I++I +Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141 Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCYPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y P Sbjct: 262 DLLDYNP 268 >gi|194396733|ref|YP_002037325.1| thymidylate synthase [Streptococcus pneumoniae G54] gi|194356400|gb|ACF54848.1| thymidylate synthase [Streptococcus pneumoniae G54] Length = 279 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 23/249 (9%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ + + L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLFKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMM 187 ++ L PC FQ D ++ ++Y QRS D+ + N Y L MM Sbjct: 142 YQAFEETDGLLPC--AFQTMFDVRRIDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMM 199 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + E Sbjct: 200 IAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAE 259 Query: 246 DFTLRSYEP 254 DF L Y+P Sbjct: 260 DFELVDYDP 268 >gi|33152142|ref|NP_873495.1| thymidylate synthase [Haemophilus ducreyi 35000HP] gi|38372558|sp|Q7VMH2|TYSY_HAEDU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|33148364|gb|AAP95884.1| thymidylate synthase [Haemophilus ducreyi 35000HP] Length = 283 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G + RT + + +D++KG FPL+TT+K WK+ + E Sbjct: 1 MKQYLDLCHRILNEGKWVKNKRTDKLCLTVINADLTYDVAKGEFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ + +G +YG R +P D Sbjct: 61 LLGYIRGYDNAADFRQLGTKSWDANANQNADWLANPYRKGVDDMGLVYGAIGRKFPKADH 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L +R I + ++ L PC F + +G L QR Sbjct: 121 GSLDLLKQIVDDLSNGIDNRGEIYTFYHPGAFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + + G+ H + + H+Y + D+QL R P Sbjct: 181 SADVPLGLNWNMVQCYTFLALMAQITNHKAGQVFHKIVNAHIYEDQLALMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P + INP I L +DF + +Y H +I S+ Sbjct: 241 ATPTLTINPAIKSLEDLEIWVTLDDFKVENYFYHPSIQYPFSI 283 >gi|327489635|gb|EGF21427.1| thymidylate synthase [Streptococcus sanguinis SK1058] Length = 279 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 80/256 (31%), Positives = 130/256 (50%), Gaps = 23/256 (8%) Query: 14 FGSDRRDRTGVG----TRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN 68 F + R R G ++ G +DLSKG FP+ T + + KS + E+LW + SN Sbjct: 21 FSENARPRYKNGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSN 80 Query: 69 VSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYS 125 L ++ V W++W D G +G YG + N+I++I +Q L A+P++ Sbjct: 81 SLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWN 132 Query: 126 RRHIVSAWNVALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIAS 180 RR+I+S W+ ++ L PC +F +G L L QRS D+ + N Sbjct: 133 RRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQ 192 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVD 238 Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + Sbjct: 193 YVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTN 252 Query: 239 LLSFRYEDFTLRSYEP 254 + EDF L Y P Sbjct: 253 FFDIKAEDFELLDYNP 268 >gi|331266063|ref|YP_004325693.1| thymidylate synthase [Streptococcus oralis Uo5] gi|326682735|emb|CBZ00352.1| thymidylate synthase [Streptococcus oralis Uo5] Length = 279 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I++ L +P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEENPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 + L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEATDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRKPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|289168310|ref|YP_003446579.1| thymidylate synthase [Streptococcus mitis B6] gi|288907877|emb|CBJ22717.1| thymidylate synthase [Streptococcus mitis B6] Length = 279 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D T ++ G +DL+KG FP+ T + + KS + E+LW + SN + L+ ++ Sbjct: 30 KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLDVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ +++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + R +DF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIRADDF 261 Query: 248 TLRSYEP 254 L Y P Sbjct: 262 ELVDYNP 268 >gi|325689776|gb|EGD31780.1| thymidylate synthase [Streptococcus sanguinis SK115] gi|325696424|gb|EGD38314.1| thymidylate synthase [Streptococcus sanguinis SK160] Length = 279 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I++I +Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 Y+P Sbjct: 262 EFLDYDP 268 >gi|71665293|ref|XP_819618.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi strain CL Brener] gi|70884927|gb|EAN97767.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma cruzi] Length = 118 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/116 (47%), Positives = 74/116 (63%) Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 L QFYV NG+LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+ Sbjct: 3 LAQFYVSNGELSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHV 62 Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Y+NH E + QL R PR P ++ L + D + Y P+ I K++V Sbjct: 63 YSNHVEPCNEQLKRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 118 >gi|327460436|gb|EGF06773.1| thymidylate synthase [Streptococcus sanguinis SK1057] Length = 279 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I +I +Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIIHKI---LQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLCREPSDCQPRLLLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELLDYDP 268 >gi|324991230|gb|EGC23164.1| thymidylate synthase [Streptococcus sanguinis SK353] Length = 296 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 47 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 106 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I++I +Q L A+P++RR+I+S W+ Sbjct: 107 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 158 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L +M+A Sbjct: 159 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQIMIA 218 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 219 KHFGWKIGKFFYFINNLHIYDNQFEQAEELLCREPSDCHPRLVLNVPDGTNFFDIKAEDF 278 Query: 248 TLRSYEP 254 L Y+P Sbjct: 279 ELLDYDP 285 >gi|149005786|ref|ZP_01829525.1| thymidylate synthase [Streptococcus pneumoniae SP18-BS74] gi|307126865|ref|YP_003878896.1| thymidylate synthase [Streptococcus pneumoniae 670-6B] gi|147762726|gb|EDK69686.1| thymidylate synthase [Streptococcus pneumoniae SP18-BS74] gi|306483927|gb|ADM90796.1| thymidylate synthase [Streptococcus pneumoniae 670-6B] gi|332077096|gb|EGI87558.1| thymidylate synthase [Streptococcus pneumoniae GA17545] Length = 279 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ +++ L +P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLIQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|148985252|ref|ZP_01818475.1| thymidylate synthase [Streptococcus pneumoniae SP3-BS71] gi|168487239|ref|ZP_02711747.1| thymidylate synthase [Streptococcus pneumoniae CDC1087-00] gi|221231485|ref|YP_002510637.1| thymidylate synthase [Streptococcus pneumoniae ATCC 700669] gi|225854195|ref|YP_002735707.1| thymidylate synthase [Streptococcus pneumoniae JJA] gi|254790251|sp|B8ZMQ1|TYSY_STRPJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790252|sp|C1CD36|TYSY_STRZJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|147922450|gb|EDK73569.1| thymidylate synthase [Streptococcus pneumoniae SP3-BS71] gi|183569880|gb|EDT90408.1| thymidylate synthase [Streptococcus pneumoniae CDC1087-00] gi|220673945|emb|CAR68454.1| thymidylate synthase [Streptococcus pneumoniae ATCC 700669] gi|225722869|gb|ACO18722.1| thymidylate synthase [Streptococcus pneumoniae JJA] gi|301799707|emb|CBW32272.1| thymidylate synthase [Streptococcus pneumoniae OXC141] Length = 279 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ +++ L +P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|332361331|gb|EGJ39135.1| thymidylate synthase [Streptococcus sanguinis SK1056] Length = 279 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I++I +Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N F+QA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKIGKFFYFINNLHIYDNQFKQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 DLLDYDP 268 >gi|182683595|ref|YP_001835342.1| thymidylate synthase [Streptococcus pneumoniae CGSP14] gi|303254749|ref|ZP_07340850.1| thymidylate synthase [Streptococcus pneumoniae BS455] gi|303259941|ref|ZP_07345915.1| thymidylate synthase [Streptococcus pneumoniae SP-BS293] gi|303261347|ref|ZP_07347295.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS292] gi|303264013|ref|ZP_07349934.1| thymidylate synthase [Streptococcus pneumoniae BS397] gi|303266327|ref|ZP_07352217.1| thymidylate synthase [Streptococcus pneumoniae BS457] gi|303268794|ref|ZP_07354582.1| thymidylate synthase [Streptococcus pneumoniae BS458] gi|182628929|gb|ACB89877.1| thymidylate synthase [Streptococcus pneumoniae CGSP14] gi|301801532|emb|CBW34224.1| thymidylate synthase [Streptococcus pneumoniae INV200] gi|302598289|gb|EFL65334.1| thymidylate synthase [Streptococcus pneumoniae BS455] gi|302637481|gb|EFL67968.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS292] gi|302638860|gb|EFL69321.1| thymidylate synthase [Streptococcus pneumoniae SP-BS293] gi|302641659|gb|EFL72018.1| thymidylate synthase [Streptococcus pneumoniae BS458] gi|302644138|gb|EFL74395.1| thymidylate synthase [Streptococcus pneumoniae BS457] gi|302646418|gb|EFL76644.1| thymidylate synthase [Streptococcus pneumoniae BS397] Length = 279 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ +++ L +P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRIDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|15900570|ref|NP_345174.1| thymidylate synthase [Streptococcus pneumoniae TIGR4] gi|15902629|ref|NP_358179.1| thymidylate synthase [Streptococcus pneumoniae R6] gi|111658670|ref|ZP_01409313.1| hypothetical protein SpneT_02000176 [Streptococcus pneumoniae TIGR4] gi|116516193|ref|YP_816080.1| thymidylate synthase [Streptococcus pneumoniae D39] gi|148992222|ref|ZP_01821945.1| thymidylate synthase [Streptococcus pneumoniae SP9-BS68] gi|148997250|ref|ZP_01824904.1| thymidylate synthase [Streptococcus pneumoniae SP11-BS70] gi|149002362|ref|ZP_01827304.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS69] gi|149010709|ref|ZP_01832080.1| thymidylate synthase [Streptococcus pneumoniae SP19-BS75] gi|149020283|ref|ZP_01835175.1| thymidylate synthase [Streptococcus pneumoniae SP23-BS72] gi|168482897|ref|ZP_02707849.1| thymidylate synthase [Streptococcus pneumoniae CDC1873-00] gi|168488350|ref|ZP_02712549.1| thymidylate synthase [Streptococcus pneumoniae SP195] gi|168492256|ref|ZP_02716399.1| thymidylate synthase [Streptococcus pneumoniae CDC0288-04] gi|168492827|ref|ZP_02716970.1| thymidylate synthase [Streptococcus pneumoniae CDC3059-06] gi|168575339|ref|ZP_02721275.1| thymidylate synthase [Streptococcus pneumoniae MLV-016] gi|169833725|ref|YP_001694142.1| thymidylate synthase [Streptococcus pneumoniae Hungary19A-6] gi|225856362|ref|YP_002737873.1| thymidylate synthase [Streptococcus pneumoniae P1031] gi|225858497|ref|YP_002740007.1| thymidylate synthase [Streptococcus pneumoniae 70585] gi|225860660|ref|YP_002742169.1| thymidylate synthase [Streptococcus pneumoniae Taiwan19F-14] gi|237650310|ref|ZP_04524562.1| thymidylate synthase [Streptococcus pneumoniae CCRI 1974] gi|237821973|ref|ZP_04597818.1| thymidylate synthase [Streptococcus pneumoniae CCRI 1974M2] gi|298229819|ref|ZP_06963500.1| thymidylate synthase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254801|ref|ZP_06978387.1| thymidylate synthase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502463|ref|YP_003724403.1| thymidylate synthase [Streptococcus pneumoniae TCH8431/19A] gi|307067287|ref|YP_003876253.1| thymidylate synthase [Streptococcus pneumoniae AP200] gi|54039799|sp|P67050|TYSY_STRR6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54042284|sp|P67049|TYSY_STRPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|122279034|sp|Q04LL8|TYSY_STRP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790250|sp|C1C631|TYSY_STRP7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790253|sp|C1CJD5|TYSY_STRZP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790254|sp|C1CQE7|TYSY_STRZT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|14972144|gb|AAK74814.1| thymidylate synthase [Streptococcus pneumoniae TIGR4] gi|15458166|gb|AAK99389.1| Thymidylate synthase [Streptococcus pneumoniae R6] gi|116076769|gb|ABJ54489.1| thymidylate synthase [Streptococcus pneumoniae D39] gi|147756950|gb|EDK63990.1| thymidylate synthase [Streptococcus pneumoniae SP11-BS70] gi|147759677|gb|EDK66668.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS69] gi|147765190|gb|EDK72119.1| thymidylate synthase [Streptococcus pneumoniae SP19-BS75] gi|147928848|gb|EDK79860.1| thymidylate synthase [Streptococcus pneumoniae SP9-BS68] gi|147930585|gb|EDK81567.1| thymidylate synthase [Streptococcus pneumoniae SP23-BS72] gi|168996227|gb|ACA36839.1| thymidylate synthase [Streptococcus pneumoniae Hungary19A-6] gi|172043796|gb|EDT51842.1| thymidylate synthase [Streptococcus pneumoniae CDC1873-00] gi|183573208|gb|EDT93736.1| thymidylate synthase [Streptococcus pneumoniae SP195] gi|183573554|gb|EDT94082.1| thymidylate synthase [Streptococcus pneumoniae CDC0288-04] gi|183576820|gb|EDT97348.1| thymidylate synthase [Streptococcus pneumoniae CDC3059-06] gi|183578413|gb|EDT98941.1| thymidylate synthase [Streptococcus pneumoniae MLV-016] gi|225721852|gb|ACO17706.1| thymidylate synthase [Streptococcus pneumoniae 70585] gi|225726198|gb|ACO22050.1| thymidylate synthase [Streptococcus pneumoniae P1031] gi|225726770|gb|ACO22621.1| thymidylate synthase [Streptococcus pneumoniae Taiwan19F-14] gi|298238058|gb|ADI69189.1| thymidylate synthase [Streptococcus pneumoniae TCH8431/19A] gi|306408824|gb|ADM84251.1| Thymidylate synthase [Streptococcus pneumoniae AP200] gi|327390399|gb|EGE88740.1| thymidylate synthase [Streptococcus pneumoniae GA04375] gi|332074474|gb|EGI84950.1| thymidylate synthase [Streptococcus pneumoniae GA17570] gi|332075963|gb|EGI86429.1| thymidylate synthase [Streptococcus pneumoniae GA41301] gi|332202546|gb|EGJ16615.1| thymidylate synthase [Streptococcus pneumoniae GA41317] gi|332203827|gb|EGJ17894.1| thymidylate synthase [Streptococcus pneumoniae GA47368] Length = 279 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ +++ L +P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|262282289|ref|ZP_06060057.1| thymidylate synthase [Streptococcus sp. 2_1_36FAA] gi|262261580|gb|EEY80278.1| thymidylate synthase [Streptococcus sp. 2_1_36FAA] Length = 279 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W G +G YG + D I I+Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGATGTIGQRYGAVVKKH--------DIIHIILQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELLDYDP 268 >gi|317062887|ref|ZP_07927372.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185] gi|313688563|gb|EFS25398.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185] Length = 276 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 20/254 (7%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77 D T +S GYQ R D S L+TT+ K+ + EL W SN V L++ Sbjct: 34 DGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPSKAPIRELYWIWIMQSNDVDELNKLKC 93 Query: 78 SIWDEWADKDGELGPIYGVQ-------WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 WDEW +DG +G YG Q +RS DY +V+ L+ +P SRR + Sbjct: 94 KFWDEWKMEDGTIGKAYGYQIAKQTFGYRSQLDY----------VVEELKKNPNSRRIMT 143 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 W +DKMAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A Sbjct: 144 EIWVPEDLDKMALTPCVHLTQWSVIGSKLYLEVRQRSCDVALGLVANVFQYSILHKLVAM 203 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G + E I + +VH+Y+ H + Q+ R P + N + F+ +D + Sbjct: 204 ECGLEPAEIIWNIHNVHIYDRHMPELLEQIKR-PSINGATVKIENFKSIYDFKPDDIVVE 262 Query: 251 SYEPHAAILAKVSV 264 +Y+ I +V++ Sbjct: 263 TYQYGDKISYEVAI 276 >gi|257468630|ref|ZP_05632724.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185] Length = 274 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 20/254 (7%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77 D T +S GYQ R D S L+TT+ K+ + EL W SN V L++ Sbjct: 32 DGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPSKAPIRELYWIWIMQSNDVDELNKLKC 91 Query: 78 SIWDEWADKDGELGPIYGVQ-------WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 WDEW +DG +G YG Q +RS DY +V+ L+ +P SRR + Sbjct: 92 KFWDEWKMEDGTIGKAYGYQIAKQTFGYRSQLDY----------VVEELKKNPNSRRIMT 141 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 W +DKMAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A Sbjct: 142 EIWVPEDLDKMALTPCVHLTQWSVIGSKLYLEVRQRSCDVALGLVANVFQYSILHKLVAM 201 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G + E I + +VH+Y+ H + Q+ R P + N + F+ +D + Sbjct: 202 ECGLEPAEIIWNIHNVHIYDRHMPELLEQIKR-PSINGATVKIENFKSIYDFKPDDIVVE 260 Query: 251 SYEPHAAILAKVSV 264 +Y+ I +V++ Sbjct: 261 TYQYGDKISYEVAI 274 >gi|323351648|ref|ZP_08087302.1| thymidylate synthase [Streptococcus sanguinis VMC66] gi|322122134|gb|EFX93860.1| thymidylate synthase [Streptococcus sanguinis VMC66] Length = 279 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFTEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I +I +Q L A+P++RR+I+S W+ Sbjct: 90 HVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIIHKI---LQQLEANPWNRRNIISLWD 141 Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y P Sbjct: 262 ELLDYNP 268 >gi|270292276|ref|ZP_06198490.1| thymidylate synthase [Streptococcus sp. M143] gi|270279322|gb|EFA25165.1| thymidylate synthase [Streptococcus sp. M143] Length = 279 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DL+ G FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFAEYDLAMGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNSKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKIGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y P Sbjct: 262 ELVDYNP 268 >gi|148989041|ref|ZP_01820441.1| thymidylate synthase [Streptococcus pneumoniae SP6-BS73] gi|147925538|gb|EDK76615.1| thymidylate synthase [Streptococcus pneumoniae SP6-BS73] Length = 279 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D T ++ G +DLSKG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ +++ L +P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTSFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|291529718|emb|CBK95304.1| Thymidylate synthase [Eubacterium rectale M104/1] Length = 290 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 21/231 (9%) Query: 35 RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGP 92 ++DLSKG P+ T + + WKS V E+LW + SN ++ LH G+ WD+W DG +G Sbjct: 50 QYDLSKGECPVETLRPIAWKSAVKEILWIYQMQSNKINDLHEMGIKYWDDWDIGDGTIGC 109 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW-------NVALIDKMALPP 145 YG + + ++ ++ L+ DP+ RRHI++ W K P Sbjct: 110 RYGATVKRH--------NLMNKLLNGLKQDPFGRRHIMNMWQEDDFSDETGGTTKGLNPC 161 Query: 146 CHCLF---QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 C+ ++ D L + QRS D + N Y L +M+A V GF+ G F H Sbjct: 162 CYETIWNVRWGEDGLYLDMLMNQRSSDYEISCAINELQYIALQLMVAKVCGFKPGMFTHV 221 Query: 203 LGDVHLYNNHFEQADLQLSR-SPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 + +V +Y+ H L+R S R PQ+I+N + D F +DF L Y Sbjct: 222 IENVQIYDRHVNNVKTLLTRESVRCCPQLILNTDKTDFYKFTIDDFVLTDY 272 >gi|124262681|ref|YP_001023151.1| thymidylate synthase [Methylibium petroleiphilum PM1] gi|124261927|gb|ABM96916.1| thymidylate synthase [Methylibium petroleiphilum PM1] Length = 316 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 48/286 (16%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q+ D+L+H++ GS + + RTG GY +RFD++ GFP +TTK++ +K EL Sbjct: 1 MQQFHDMLQHILDHGSRQLNARTGEEVLFVPGYTLRFDMADGFPAITTKQLFFKMAKGEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDGN 107 F RG ++ + G ++W++ A+K + +LG +QW W D+ Sbjct: 61 FGFFRGFTSAAQFREIGCTVWNDNANKTKAWLANPYRQGEDDLGRFGYLQWTDWRDWREA 120 Query: 108 V------------------------------IDQISSIVQSLRADPYSRRHIVSAWNVAL 137 I+Q+ + + ++ +P R I+S WN A Sbjct: 121 TTPAQRDEMLAQGYEVRAHDAERGVWILRRSINQLETSLHAVMTNPSDRGIILSGWNPAE 180 Query: 138 IDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 ID+ AL CH + VD G L L+QRS D L +N+A ++ ++A + G + Sbjct: 181 IDQGALRSCHVSYMLQVDVATGTLHLTLWQRSFDAPLA--YNVAIGAMYLEIMARLAGLK 238 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 G F H + D H+Y H L+R P + + NI L S Sbjct: 239 AGTFTHFISDAHIYAKHIPGVKEMLAREHFPQPTLDLG-NIPTLTS 283 >gi|315613465|ref|ZP_07888373.1| thymidylate synthase [Streptococcus sanguinis ATCC 49296] gi|315314461|gb|EFU62505.1| thymidylate synthase [Streptococcus sanguinis ATCC 49296] Length = 279 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D T ++ G +DLSK FP+ T + + KS + E+LW + SN + L+ ++ Sbjct: 30 KDGTVANSKYVTGAFAEYDLSKEEFPITTLRPIAIKSAIKEVLWIYQDQSNSLDVLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + D I+ I++ L +P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLETNPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLGREPSNCQPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|306833692|ref|ZP_07466819.1| thymidylate synthase [Streptococcus bovis ATCC 700338] gi|304424462|gb|EFM27601.1| thymidylate synthase [Streptococcus bovis ATCC 700338] Length = 303 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 126/244 (51%), Gaps = 23/244 (9%) Query: 24 VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIW 80 ++ G +DLSKG FP+ T + + KS + E+ W + +N +S L+ ++ V W Sbjct: 59 ANSKYVTGVFAEYDLSKGEFPITTLRPIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYW 118 Query: 81 DEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALI 138 ++W D G +G YG + D I I++ L +P++RR+++S W+ A Sbjct: 119 NDWEVDNSGTIGERYGAVVKKH--------DIIRKILKQLEENPWNRRNVISLWDYEAFE 170 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMMLASVI 192 + L PC FQ D ++ ++Y QRS D+ + N Y L MM+A Sbjct: 171 NTDGLLPC--AFQTMYDVRRVDGEIYLDATLTQRSNDMLVSHHINAMQYVALQMMIAKHF 228 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSR-SPRTLPQMIIN-PNIVDLLSFRYEDFTLR 250 G++ G+F + + ++H+Y+N FEQA LSR S P++++N P+ D + EDF L Sbjct: 229 GWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRLVLNVPDGTDFFDIKPEDFELV 288 Query: 251 SYEP 254 YEP Sbjct: 289 DYEP 292 >gi|288905459|ref|YP_003430681.1| thymidylate synthase [Streptococcus gallolyticus UCN34] gi|306831541|ref|ZP_07464699.1| thymidylate synthase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732185|emb|CBI13750.1| thymidylate synthase [Streptococcus gallolyticus UCN34] gi|304426326|gb|EFM29440.1| thymidylate synthase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 279 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 126/244 (51%), Gaps = 23/244 (9%) Query: 24 VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIW 80 ++ G +DLSKG FP+ T + + KS + E+ W + +N +S L+ ++ V W Sbjct: 35 ANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYW 94 Query: 81 DEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALI 138 ++W D G +G YG + D I I++ L +P++RR+++S W+ A Sbjct: 95 NDWEVDNSGTIGERYGAVVKKH--------DIIRKILKQLEENPWNRRNVISLWDYEAFE 146 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMMLASVI 192 + L PC FQ D ++ ++Y QRS D+ + N Y L MM+A Sbjct: 147 NTDGLLPC--AFQTMYDVRRVDGEIYLDATLTQRSNDMLVSHHINAMQYVALQMMIAKHF 204 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSR-SPRTLPQMIIN-PNIVDLLSFRYEDFTLR 250 G++ G+F + + ++H+Y+N FEQA LSR S P++++N P+ D + EDF L Sbjct: 205 GWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRLVLNVPDGTDFFDIKPEDFELV 264 Query: 251 SYEP 254 YEP Sbjct: 265 DYEP 268 >gi|312866637|ref|ZP_07726851.1| thymidylate synthase [Streptococcus parasanguinis F0405] gi|311097718|gb|EFQ55948.1| thymidylate synthase [Streptococcus parasanguinis F0405] Length = 279 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 127/251 (50%), Gaps = 27/251 (10%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G M FDLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGRTANSKYITGAFMEFDLSKGEFPITTLRPIAIKSAIKEMLWIYQDQSNSLDLLEDKY 89 Query: 76 GVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D +G YG + D + I++ L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDSRTIGQRYGAVVKKH--------DITNKILKQLEANPWNRRNIISLWD 141 Query: 135 V-ALIDKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMM 187 A + L PC FQ D ++ ++Y QRS D+ + N Y L MM Sbjct: 142 YDAFEETEGLLPC--AFQTMFDVRRVDEEIYLDATLTQRSNDMLVAHHINAMQYVALQMM 199 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIINPNIVDLLSF---R 243 +A G++ G+F + + ++H+Y+N FEQA+ L R P P +++ N+ D SF + Sbjct: 200 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPHLVL--NVADGTSFFDIK 257 Query: 244 YEDFTLRSYEP 254 EDF L Y+P Sbjct: 258 PEDFELVDYDP 268 >gi|25011427|ref|NP_735822.1| thymidylate synthase [Streptococcus agalactiae NEM316] gi|76787961|ref|YP_329956.1| thymidylate synthase [Streptococcus agalactiae A909] gi|77411173|ref|ZP_00787525.1| thymidylate synthase [Streptococcus agalactiae CJB111] gi|77414071|ref|ZP_00790240.1| thymidylate synthase [Streptococcus agalactiae 515] gi|62901376|sp|Q8E4L6|TYSY_STRA3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123601631|sp|Q3K0J7|TYSY_STRA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|24412965|emb|CAD47044.1| thymidylate synthase [Streptococcus agalactiae NEM316] gi|76563018|gb|ABA45602.1| thymidylate synthase [Streptococcus agalactiae A909] gi|77159869|gb|EAO71011.1| thymidylate synthase [Streptococcus agalactiae 515] gi|77162791|gb|EAO73750.1| thymidylate synthase [Streptococcus agalactiae CJB111] Length = 279 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 122/235 (51%), Gaps = 19/235 (8%) Query: 31 GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN--VSYLHRHGVSIWDEW-ADK 86 G +DLSKG FP+ T + + KS + E+ W + +N V ++GV+ W++W Sbjct: 42 GAFAEYDLSKGEFPITTLRPIPIKSAIKEIFWIYQDQTNDLVVLNDKYGVTYWNDWEVGH 101 Query: 87 DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALIDKMALPP 145 G +G YG + N+I S +++ L +P++RR+++S W+ A + L P Sbjct: 102 TGTIGQRYGAVVKK-----HNII---SKLLKQLEDNPWNRRNVISLWDYEAFEETEGLLP 153 Query: 146 C--HCLFQFYVDNGKL--SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 C +F NG+L L QRS D+ + N Y L MM+A G++ G+F + Sbjct: 154 CAFQTMFDVRRVNGELYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWRVGKFFY 213 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDFTLRSYEP 254 + ++H+Y+N FEQA L R P P++++N P+ D + +DF L Y+P Sbjct: 214 FINNLHIYDNQFEQAQELLKRQPSECNPKLVLNVPDGTDFFDIKPDDFALVDYDP 268 >gi|325978449|ref|YP_004288165.1| thymidylate synthase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178377|emb|CBZ48421.1| thyA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 279 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 123/242 (50%), Gaps = 19/242 (7%) Query: 24 VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIW 80 ++ G +DLSKG FP+ T + + KS + E+ W + +N +S L+ ++ V W Sbjct: 35 ANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYW 94 Query: 81 DEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALI 138 ++W D G +G YG + D I I++ L +P++RR+++S W+ A Sbjct: 95 NDWEVDNSGTIGERYGAVVKKH--------DIIRKILKQLEENPWNRRNVISLWDYEAFE 146 Query: 139 DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 + L PC + V D L L QRS D+ + N Y L MM+A G+ Sbjct: 147 NTDGLLPCAFQTMYDVRRVDDEIYLDATLTQRSNDMLVSHHINAMQYVALQMMIAKHFGW 206 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSR-SPRTLPQMIIN-PNIVDLLSFRYEDFTLRSY 252 + G+F + + ++H+Y+N FEQA LSR S P++++N P+ D + EDF L Y Sbjct: 207 KVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRLVLNVPDGTDFFDIKPEDFELVDY 266 Query: 253 EP 254 EP Sbjct: 267 EP 268 >gi|325694584|gb|EGD36493.1| thymidylate synthase [Streptococcus sanguinis SK150] Length = 279 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D +G YG + N+I +I +Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTCTIGQRYGAVVKK-----HNIIHKI---LQQLEANPWNRRNIISLWD 141 Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELLDYDP 268 >gi|332366635|gb|EGJ44378.1| thymidylate synthase [Streptococcus sanguinis SK1059] Length = 279 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + E+LW + SN L ++ Sbjct: 30 KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89 Query: 76 GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D G +G YG + N+I +I +Q L A+P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIIHKI---LQQLEANPWNRRNIISLWD 141 Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N + + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVSDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELLDYDP 268 >gi|322372507|ref|ZP_08047043.1| thymidylate synthase [Streptococcus sp. C150] gi|321277549|gb|EFX54618.1| thymidylate synthase [Streptococcus sp. C150] Length = 286 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/249 (30%), Positives = 128/249 (51%), Gaps = 16/249 (6%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D T ++ G +DLSKG FP+ T + + KS + E+ W + +N + L ++ Sbjct: 30 KDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W++W +D P RS G V+ D I+ ++ L A+P++RR+++S Sbjct: 90 NVHYWNDWEVEDV---PANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146 Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ ++ A L PC F V ++ L L QRS D+ + N Y L MM Sbjct: 147 WDYEAFEETAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSNDMLVAHHINAMQYVALQMM 206 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N FEQA+ L R P P++I+N P+ + + E Sbjct: 207 IAKHFGWKVGKFFYFVNNLHVYDNQFEQAEELLKRQPSDCQPRLILNVPDGTNFFDIKPE 266 Query: 246 DFTLRSYEP 254 DF L Y+P Sbjct: 267 DFELVDYDP 275 >gi|55822548|ref|YP_140989.1| thymidylate synthase [Streptococcus thermophilus CNRZ1066] gi|62901188|sp|Q5M0S7|TYSY_STRT1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|55738533|gb|AAV62174.1| thymidylate synthase [Streptococcus thermophilus CNRZ1066] Length = 286 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 16/249 (6%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D T ++ G +DLSKG FP+ T + + KS + E+ W + +N + L ++ Sbjct: 30 KDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W++W + E P RS G V+ D I+ ++ L A+P++RR+++S Sbjct: 90 NVHYWNDW---EVEGVPANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146 Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ ++ A L PC F V ++ L L QRS D+ + N Y L MM Sbjct: 147 WDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSNDMLVAHHINAMQYVALQMM 206 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + E Sbjct: 207 IAKHFGWKIGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLVLNVPDETNFFDIKPE 266 Query: 246 DFTLRSYEP 254 DF L Y+P Sbjct: 267 DFELVDYDP 275 >gi|125623803|ref|YP_001032286.1| thymidylate synthase [Lactococcus lactis subsp. cremoris MG1363] gi|18539502|gb|AAL74419.1|AF462070_1 thymidylate synthase [Lactococcus lactis subsp. cremoris MG1363] gi|149513|gb|AAA25221.1| thymidylate synthase (EC 2.1.1.45) [Lactococcus lactis] gi|124492611|emb|CAL97556.1| ThyA protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070573|gb|ADJ59973.1| thymidylate synthase [Lactococcus lactis subsp. cremoris NZ9000] Length = 279 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD-SNVSYLH-RH 75 +D ++ G + +DL KG FP+ T + + KS + EL+W + S +S L ++ Sbjct: 30 KDGQMANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKELMWIYQDQTSELSVLEEKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 GV W EW DG +G YG + + + I +++ L +P++RR+I++ W Sbjct: 90 GVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLEGLAKNPWNRRNIINLWQY 141 Query: 136 ALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC F V K L L QRS D+ + N Y L MM+A Sbjct: 142 EDFEETEGLLPCAFQTMFDVRREKDGQIYLDATLIQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247 ++ G+F + + ++H+Y+N FEQA+ + R+ P++++N P+ + + EDF Sbjct: 202 KHFSWKVGKFFYFVNNLHIYDNQFEQANELMKRTASEKEPRLVLNVPDGTNFFDIKPEDF 261 Query: 248 TLRSYEP 254 L YEP Sbjct: 262 ELVDYEP 268 >gi|116627466|ref|YP_820085.1| thymidylate synthase [Streptococcus thermophilus LMD-9] gi|122267936|sp|Q03LN3|TYSY_STRTD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116100743|gb|ABJ65889.1| thymidylate synthase [Streptococcus thermophilus LMD-9] gi|312277984|gb|ADQ62641.1| Thymidylate synthase [Streptococcus thermophilus ND03] Length = 286 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 16/249 (6%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D T ++ G +DLSKG FP+ T + + KS + E+ W + +N + L ++ Sbjct: 30 KDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W++W + E P RS G V+ D I+ ++ L A+P++RR+++S Sbjct: 90 NVHYWNDW---EVEGVPANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146 Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ ++ A L PC F V ++ L L QRS D+ + N Y L MM Sbjct: 147 WDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSNDMLVAHHINAMQYVALQMM 206 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + E Sbjct: 207 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLVLNVPDETNFFDIKPE 266 Query: 246 DFTLRSYEP 254 DF L Y+P Sbjct: 267 DFELVDYDP 275 >gi|22537462|ref|NP_688313.1| thymidylate synthase [Streptococcus agalactiae 2603V/R] gi|76798605|ref|ZP_00780833.1| thymidylate synthase [Streptococcus agalactiae 18RS21] gi|77409178|ref|ZP_00785890.1| thymidylate synthase [Streptococcus agalactiae COH1] gi|62901375|sp|Q8DZ07|TYSY_STRA5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|22534340|gb|AAN00186.1|AE014252_9 thymidylate synthase [Streptococcus agalactiae 2603V/R] gi|76586039|gb|EAO62569.1| thymidylate synthase [Streptococcus agalactiae 18RS21] gi|77172224|gb|EAO75381.1| thymidylate synthase [Streptococcus agalactiae COH1] gi|319745294|gb|EFV97612.1| thymidylate synthase [Streptococcus agalactiae ATCC 13813] Length = 279 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 125/235 (53%), Gaps = 19/235 (8%) Query: 31 GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIWDEW-ADK 86 G +DLSKG FP+ T + + KS + E+ W + +N ++ L+ ++GV+ W++W Sbjct: 42 GAFAEYDLSKGEFPITTLRPIPIKSAIKEIFWIYQDQTNDLAVLNDKYGVTYWNDWEVGH 101 Query: 87 DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALIDKMALPP 145 G +G YG + N+I S +++ L +P++RR+++S W+ A + L P Sbjct: 102 TGTIGQRYGAVVKK-----HNII---SKLLKQLEDNPWNRRNVISLWDYEAFEETEGLLP 153 Query: 146 C--HCLFQFYVDNGKL--SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 C +F NG+L L QRS D+ + N Y L MM+A G++ G+F + Sbjct: 154 CAFQTMFDVRRVNGELYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWRVGKFFY 213 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDFTLRSYEP 254 + ++H+Y+N FEQA L R P P++++N P+ D + +DF L Y+P Sbjct: 214 FINNLHIYDNQFEQAQELLKRQPSECNPKLVLNVPDGTDFFDIKPDDFALVDYDP 268 >gi|15674907|ref|NP_269081.1| thymidylate synthase [Streptococcus pyogenes M1 GAS] gi|28896164|ref|NP_802514.1| thymidylate synthase [Streptococcus pyogenes SSI-1] gi|71910501|ref|YP_282051.1| thymidylate synthase [Streptococcus pyogenes MGAS5005] gi|161485748|ref|NP_664405.2| thymidylate synthase [Streptococcus pyogenes MGAS315] gi|54039800|sp|P67052|TYSY_STRP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54042285|sp|P67051|TYSY_STRP1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|13622048|gb|AAK33802.1| putative thymidylate synthase [Streptococcus pyogenes M1 GAS] gi|28811414|dbj|BAC64347.1| putative thymidylate synthase [Streptococcus pyogenes SSI-1] gi|71853283|gb|AAZ51306.1| thymidylate synthase [Streptococcus pyogenes MGAS5005] Length = 279 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G +DL+KG FP+ T + + KS + EL W + SN + L ++ Sbjct: 30 KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 89 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W+EW D+ +G YG + D IS I++ L +P++RR+++S W+ Sbjct: 90 NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 141 Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC F V ++ L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N F+QA L R P + P++++N P+ + + +DF Sbjct: 202 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDRTNFFDIKPDDF 261 Query: 248 TLRSYEP 254 L++Y+P Sbjct: 262 ELQNYDP 268 >gi|312863183|ref|ZP_07723421.1| thymidylate synthase [Streptococcus vestibularis F0396] gi|322517189|ref|ZP_08070072.1| thymidylate synthase [Streptococcus vestibularis ATCC 49124] gi|311100719|gb|EFQ58924.1| thymidylate synthase [Streptococcus vestibularis F0396] gi|322124248|gb|EFX95764.1| thymidylate synthase [Streptococcus vestibularis ATCC 49124] Length = 286 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 16/249 (6%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D T ++ G +DLS+G FP+ T + + KS + E+ W + +N + L ++ Sbjct: 30 KDGTTANSKYITGAFAEYDLSRGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W++W +D P RS G V+ D I+ ++ L A+P++RR+++S Sbjct: 90 NVHYWNDWEVEDV---PANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146 Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ ++ A L PC F V ++ L L QRS D+ + N Y L MM Sbjct: 147 WDYEAFEETAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSNDMLVAHHINAMQYVALQMM 206 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N FEQA+ L R P P++I+N P+ + + E Sbjct: 207 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLILNVPDGTNFFDIKPE 266 Query: 246 DFTLRSYEP 254 DF L Y+P Sbjct: 267 DFELVDYDP 275 >gi|21904330|gb|AAM79208.1| putative thymidylate synthase [Streptococcus pyogenes MGAS315] Length = 287 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G +DL+KG FP+ T + + KS + EL W + SN + L ++ Sbjct: 38 KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 97 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W+EW D+ +G YG + D IS I++ L +P++RR+++S W+ Sbjct: 98 NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 149 Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC F V ++ L L QRS D+ + N Y L MM+A Sbjct: 150 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMIA 209 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N F+QA L R P + P++++N P+ + + +DF Sbjct: 210 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDRTNFFDIKPDDF 269 Query: 248 TLRSYEP 254 L++Y+P Sbjct: 270 ELQNYDP 276 >gi|306827521|ref|ZP_07460804.1| thymidylate synthase [Streptococcus pyogenes ATCC 10782] gi|304430319|gb|EFM33345.1| thymidylate synthase [Streptococcus pyogenes ATCC 10782] Length = 287 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G +DL+KG FP+ T + + KS + EL W + SN + L ++ Sbjct: 38 KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 97 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W+EW D+ +G YG + D IS I++ L +P++RR+++S W+ Sbjct: 98 NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 149 Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC F V ++ L L QRS D+ + N Y L MM+A Sbjct: 150 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMIA 209 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N F+QA L R P + P++++N P+ + + +DF Sbjct: 210 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDRTNFFDIKPDDF 269 Query: 248 TLRSYEP 254 L++Y+P Sbjct: 270 ELQNYDP 276 >gi|218185748|gb|EEC68175.1| hypothetical protein OsI_36122 [Oryza sativa Indica Group] Length = 404 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 12/110 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL+L+ +I+ G+ + DRTG GT S FG QMRF+L FPLLTTKKV W+ VV ELLW Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWR 99 F+ G ++ L G+ IWD E+ D ++G+LGP+YG QWR Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWR 348 >gi|19745950|ref|NP_607086.1| thymidylate synthase [Streptococcus pyogenes MGAS8232] gi|139473953|ref|YP_001128669.1| thymidylate synthase [Streptococcus pyogenes str. Manfredo] gi|161761315|ref|YP_060023.2| thymidylate synthase [Streptococcus pyogenes MGAS10394] gi|162139405|ref|YP_280136.2| thymidylate synthase [Streptococcus pyogenes MGAS6180] gi|209559235|ref|YP_002285707.1| thymidylate synthase [Streptococcus pyogenes NZ131] gi|25091466|sp|Q8P1D1|TYSY_STRP8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901240|sp|Q5XCM3|TYSY_STRP6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231738|sp|A2RF20|TYSY_STRPG RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172046110|sp|Q48U25|TYSY_STRPM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172046224|sp|Q1JHC5|TYSY_STRPD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172046751|sp|Q1J744|TYSY_STRPF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|19748109|gb|AAL97585.1| putative thymidylate synthase [Streptococcus pyogenes MGAS8232] gi|134272200|emb|CAM30446.1| thymidylate synthase [Streptococcus pyogenes str. Manfredo] gi|209540436|gb|ACI61012.1| Thymidylate synthase [Streptococcus pyogenes NZ131] Length = 279 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G +DL+KG FP+ T + + KS + EL W + SN + L ++ Sbjct: 30 KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 89 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W+EW D+ +G YG + D IS I++ L +P++RR+++S W+ Sbjct: 90 NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 141 Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC F V ++ L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N F+QA L R P + P++++N P+ + + +DF Sbjct: 202 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDGTNFFDIKPDDF 261 Query: 248 TLRSYEP 254 L++Y+P Sbjct: 262 ELQNYDP 268 >gi|320546911|ref|ZP_08041213.1| thymidylate synthase [Streptococcus equinus ATCC 9812] gi|320448429|gb|EFW89170.1| thymidylate synthase [Streptococcus equinus ATCC 9812] Length = 295 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 23/244 (9%) Query: 24 VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIW 80 ++ G +DLS+G FP+ T + + KS + E+ W + +N +S L+ ++ V W Sbjct: 51 ANSKYVTGAFAEYDLSRGEFPITTLRPIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYW 110 Query: 81 DEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALI 138 ++W D G +G YG + D I I++ L A+P++RR+++S W+ A Sbjct: 111 NDWEVDGTGTIGERYGAVVKKH--------DIIRKILKQLEANPWNRRNVISLWDYEAFE 162 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMMLASVI 192 + L PC FQ D ++ +Y QRS D+ + N Y L MM+A Sbjct: 163 NTDGLLPC--AFQTMYDVRRVDGDIYLDATLTQRSNDMLVSHHINAMQYVALQMMIAKHF 220 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDFTLR 250 G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ D + EDF L Sbjct: 221 GWKVGKFFYFVNNLHIYDNQFEQAKELLRREPTDCKPRLVLNVPDGTDFFDIKPEDFELV 280 Query: 251 SYEP 254 Y+P Sbjct: 281 DYDP 284 >gi|116512335|ref|YP_809551.1| thymidylate synthase [Lactococcus lactis subsp. cremoris SK11] gi|123125483|sp|Q02Y43|TYSY_LACLS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116107989|gb|ABJ73129.1| thymidylate synthase [Lactococcus lactis subsp. cremoris SK11] Length = 279 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD-SNVSYLH-RH 75 +D ++ G + +DL KG FP+ T + + KS + EL+W + S +S L ++ Sbjct: 30 KDGQMANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKELMWIYQDQTSELSVLEEKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 GV W EW DG +G YG + + + I +++ L +P++RR+I++ W Sbjct: 90 GVKYWGEWRIGDGTIGQRYGATVKKY--------NIIGKLLEGLAKNPWNRRNIINLWQY 141 Query: 136 ALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC F V K L L QRS D+ + N Y L MM+A Sbjct: 142 EDFEETEGLLPCAFQTMFDVRREKDGQIYLDATLIQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247 ++ G+F + + ++H+Y+N FEQA+ + R+ P++++N P+ + + EDF Sbjct: 202 KHFSWKVGKFFYFVNNLHIYDNQFEQANELMKRTASEKEPRLVLNVPDGTNFFDIKPEDF 261 Query: 248 TLRSYEP 254 L YEP Sbjct: 262 ELVDYEP 268 >gi|296876428|ref|ZP_06900480.1| thymidylate synthase [Streptococcus parasanguinis ATCC 15912] gi|296432718|gb|EFH18513.1| thymidylate synthase [Streptococcus parasanguinis ATCC 15912] Length = 279 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 23/249 (9%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G M FDL+KG FP+ T + + KS + E+LW + SN + ++ Sbjct: 30 KDGRTANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKEMLWIYQDQSNSLDVLEEKY 89 Query: 76 GVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D +G YG + D + I++ L A+P++RR+I++ W+ Sbjct: 90 NVHYWNDWEVGDSRTIGQRYGAVVKKH--------DITNKILKQLEANPWNRRNIITLWD 141 Query: 135 V-ALIDKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMM 187 A + L PC FQ D ++ ++Y QRS D+ + N Y L MM Sbjct: 142 YDAFEESEGLLPC--AFQTMFDVRRVEGEIYLDATLTQRSNDMLVAHHINAMQYVALQMM 199 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N FEQA+ L R P++++N P+ + + E Sbjct: 200 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREATNCQPRLVLNVPDGTNFFDIKPE 259 Query: 246 DFTLRSYEP 254 DF L Y+P Sbjct: 260 DFELVDYDP 268 >gi|56808901|ref|ZP_00366610.1| COG0207: Thymidylate synthase [Streptococcus pyogenes M49 591] gi|94990255|ref|YP_598355.1| thymidylate synthase [Streptococcus pyogenes MGAS10270] gi|94994176|ref|YP_602274.1| thymidylate synthase [Streptococcus pyogenes MGAS10750] gi|50903125|gb|AAT86840.1| Thymidylate synthase [Streptococcus pyogenes MGAS10394] gi|71802428|gb|AAX71781.1| thymidylate synthase [Streptococcus pyogenes MGAS6180] gi|94543763|gb|ABF33811.1| Thymidylate synthase [Streptococcus pyogenes MGAS10270] gi|94547684|gb|ABF37730.1| Thymidylate synthase [Streptococcus pyogenes MGAS10750] Length = 287 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G +DL+KG FP+ T + + KS + EL W + SN + L ++ Sbjct: 38 KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 97 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W+EW D+ +G YG + D IS I++ L +P++RR+++S W+ Sbjct: 98 NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 149 Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC F V ++ L L QRS D+ + N Y L MM+A Sbjct: 150 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMIA 209 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N F+QA L R P + P++++N P+ + + +DF Sbjct: 210 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDGTNFFDIKPDDF 269 Query: 248 TLRSYEP 254 L++Y+P Sbjct: 270 ELQNYDP 276 >gi|19703585|ref|NP_603147.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|22096218|sp|Q8RGP6|TYSY_FUSNN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|19713687|gb|AAL94446.1| Thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 275 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W ++ +NV L+ G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDVLNELGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 WDEW +DG +G YG Q Q+ ++ L+ +P SRR + W Sbjct: 93 KFWDEWKMQDGTIGKAYGYQI---AQETFGQKSQLHYVINELKKNPNSRRIMTEIWIPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E I + ++H+Y+ H+++ Q++R ++ IN N + F+ +D + Y+ Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN-NFKSIFDFKPDDIEIIDYKYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VSYEVAI 275 >gi|55820657|ref|YP_139099.1| thymidylate synthase [Streptococcus thermophilus LMG 18311] gi|62901192|sp|Q5M5B3|TYSY_STRT2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|55736642|gb|AAV60284.1| thymidylate synthase [Streptococcus thermophilus LMG 18311] Length = 286 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 16/249 (6%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D T ++ G +DLSKG FP+ T + + KS + E+ W + +N + L ++ Sbjct: 30 KDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W++W + E P RS G V+ D I+ ++ L A+P++RR+++S Sbjct: 90 NVHYWNDW---EVEGVPANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146 Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ ++ A L PC F V ++ L L QRS D+ + N Y L MM Sbjct: 147 WDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDGTLTQRSNDMLVAHHINAMQYVALQMM 206 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + E Sbjct: 207 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLVLNVPDETNFFDIKPE 266 Query: 246 DFTLRSYEP 254 DF L Y+P Sbjct: 267 DFELVDYDP 275 >gi|228478258|ref|ZP_04062866.1| thymidylate synthase [Streptococcus salivarius SK126] gi|228249937|gb|EEK09207.1| thymidylate synthase [Streptococcus salivarius SK126] Length = 286 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 16/249 (6%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D T ++ G +DLSKG FP+ T + + KS + E+ W + +N + L ++ Sbjct: 30 KDGTTANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W++W + E P RS G V+ D I+ ++ L A+P++RR+++S Sbjct: 90 NVHYWNDW---EVEGVPANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146 Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ + A L PC F V ++ L L QRS D+ + N Y L MM Sbjct: 147 WDYEAFEATAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSNDMLVAHHINAMQYVALQMM 206 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + E Sbjct: 207 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLVLNVPDGTNFFDIKPE 266 Query: 246 DFTLRSYEP 254 DF L Y+P Sbjct: 267 DFELVDYDP 275 >gi|237737848|ref|ZP_04568329.1| thymidylate synthase [Fusobacterium mortiferum ATCC 9817] gi|229419728|gb|EEO34775.1| thymidylate synthase [Fusobacterium mortiferum ATCC 9817] Length = 274 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 28/278 (10%) Query: 4 YLDLLRHVIKFG----SDRRDRTGVGT----RSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54 Y D++ + K+G + R + GT +S GYQ R D S L+TT+ K+ Sbjct: 8 YKDIVETIDKYGIWSEGNVRTKYADGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPNKA 67 Query: 55 VVHELLW-FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQ-------WRSWPDYDG 106 + EL W ++ +NV L++ WDEW +DG +G YG Q ++S DY Sbjct: 68 PIRELYWIWIMQSNNVEELNKLKCKFWDEWKMEDGTIGKAYGYQIAKQTFGYKSQLDY-- 125 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 I+ ++ +P SRR + W +DKMAL PC L Q+ V KL ++ QR Sbjct: 126 --------IINEIKKNPNSRRIMTEIWVPEDLDKMALTPCVHLTQWSVIGNKLYLEVRQR 177 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV LG+ N+ YS+L ++A G + + I ++ +VH+Y+ H Q+ R Sbjct: 178 SCDVALGLVANVFQYSVLHKLVAMECGLEPADIIWSIHNVHIYDRHMPVLLEQIKREEFE 237 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + I N + F+ +D + +Y+ I +V++ Sbjct: 238 GAILKIE-NFTSIYDFKPDDVVVENYKYGDKISYEVAI 274 >gi|172046221|sp|Q1JM80|TYSY_STRPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172046745|sp|Q1JC96|TYSY_STRPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 279 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G +DL+KG FP+ T + + KS + EL W + SN + L ++ Sbjct: 30 KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 89 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W+EW D+ +G YG + D IS I++ L +P++RR+++S W+ Sbjct: 90 NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 141 Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC F V ++ L L QRS D+ + N Y L MM A Sbjct: 142 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMFA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N F+QA L R P + P++++N P+ + + +DF Sbjct: 202 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDGTNFFDIKPDDF 261 Query: 248 TLRSYEP 254 L++Y+P Sbjct: 262 ELQNYDP 268 >gi|94988375|ref|YP_596476.1| thymidylate synthase [Streptococcus pyogenes MGAS9429] gi|94992257|ref|YP_600356.1| thymidylate synthase [Streptococcus pyogenes MGAS2096] gi|94541883|gb|ABF31932.1| thymidylate synthase [Streptococcus pyogenes MGAS9429] gi|94545765|gb|ABF35812.1| Thymidylate synthase [Streptococcus pyogenes MGAS2096] Length = 287 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G +DL+KG FP+ T + + KS + EL W + SN + L ++ Sbjct: 38 KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 97 Query: 76 GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W+EW D+ +G YG + D IS I++ L +P++RR+++S W+ Sbjct: 98 NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 149 Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC F V ++ L L QRS D+ + N Y L MM A Sbjct: 150 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMFA 209 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N F+QA L R P + P++++N P+ + + +DF Sbjct: 210 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDGTNFFDIKPDDF 269 Query: 248 TLRSYEP 254 L++Y+P Sbjct: 270 ELQNYDP 276 >gi|146737945|gb|ABQ42561.1| thymidylate synthase [Peanut witches'-broom phytoplasma] Length = 88 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 46/83 (55%), Positives = 69/83 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+L R ++K+G+ R +RT V T+S FGY MRF+L++GFPLLTTKK+++ V+HELL Sbjct: 1 MEKYLNLCRTILKYGNIRENRTKVLTKSIFGYHMRFNLTQGFPLLTTKKINFNLVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW 83 WF++GD+N+ YL ++ V+IW+EW Sbjct: 61 WFIKGDTNIRYLVQNKVNIWNEW 83 >gi|310659774|ref|YP_003937495.1| thymidylate synthase (ts) (tsase) [Clostridium sticklandii DSM 519] gi|308826552|emb|CBH22590.1| Thymidylate synthase (TS) (TSase) [Clostridium sticklandii] Length = 277 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 112/227 (49%), Gaps = 15/227 (6%) Query: 35 RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD-SNVSYL-HRHGVSIWDEWADKDGELG 91 +D+SKG FPL+T + + WKS V E+LW + S+++ L ++ + WDEW DG +G Sbjct: 48 EYDISKGEFPLITYRPISWKSAVKEILWIYQDQTSSLNVLKEKYDIHWWDEWNIGDGTIG 107 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA-LIDKMALPPCHCLF 150 YG + + D ++ +++SL+ PY RRHI++ + ++ L PC Sbjct: 108 QRYGATVKKY--------DLVNKLLKSLKEIPYGRRHIINLYQYEDFLETDGLYPCAMET 159 Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 + V L L QRS DV + N Y+ L MM+A +G G+ H + + H+Y+ Sbjct: 160 HWSVRGDFLDVTLIQRSSDVAVANCINKIQYTALLMMVARHVGLSPGKLCHYVHNAHIYD 219 Query: 211 NHFEQADLQLSR---SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 H + L R + P +I+N D +F DF L Y P Sbjct: 220 RHIDDVISLLKRDVGKEISHPSLILNSQKTDFYNFTINDFDLIDYNP 266 >gi|291167144|gb|EFE29190.1| thymidylate synthase [Filifactor alocis ATCC 35896] Length = 278 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 16/230 (6%) Query: 35 RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIWDEW-ADKDGEL 90 +DL KG FP+LT + + WKS + E+LW + +N + L ++ + W++W ++ + Sbjct: 48 EYDLQKGEFPILTLRHIAWKSSIKEILWIYQDQTNSLDVLEDKYDIHWWNDWEVEQSRTI 107 Query: 91 GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCL 149 G YG + + D ++ ++ L+ PY RRHI++ + + L PC Sbjct: 108 GQRYGATVKRY--------DLMNKLLNGLKTQPYGRRHIINLYQYQDFQETDGLFPCAME 159 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 + V +G L L QRS DV + N Y L MM+A F+ G+F H + + H+Y Sbjct: 160 THWSVRDGILDMTLIQRSSDVPVANAINKLQYVALMMMVAKHCDFKLGKFCHLVQNAHIY 219 Query: 210 NNHFEQADLQLSRSPR---TLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 + H EQ L R + T +++++ + D +F EDF L +YEP+ Sbjct: 220 DRHVEQVKEMLERKGQEDCTDLRLVLDTDKTDFYTFTLEDFKLENYEPNK 269 >gi|34763229|ref|ZP_00144192.1| Thymidylate synthase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741125|ref|ZP_04571606.1| thymidylate synthase [Fusobacterium sp. 4_1_13] gi|294784655|ref|ZP_06749944.1| thymidylate synthase [Fusobacterium sp. 3_1_27] gi|27887109|gb|EAA24217.1| Thymidylate synthase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430657|gb|EEO40869.1| thymidylate synthase [Fusobacterium sp. 4_1_13] gi|294487871|gb|EFG35230.1| thymidylate synthase [Fusobacterium sp. 3_1_27] Length = 275 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W ++ +NV L + G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDVLDKLGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 WDEW +DG +G YG Q + G Q+ ++ L+ +P SRR + W Sbjct: 93 KFWDEWKMQDGTIGKAYGYQIAK--ETFGQK-SQLHYVINELKNNPNSRRIMTEIWIPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E I + ++H+Y+ H+++ Q++R ++ IN N + F+ +D + Y+ Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRKTFEPAKIKIN-NFKSIFDFKPDDIEIIDYKYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VSYEVAI 275 >gi|256846261|ref|ZP_05551718.1| thymidylate synthase [Fusobacterium sp. 3_1_36A2] gi|256718030|gb|EEU31586.1| thymidylate synthase [Fusobacterium sp. 3_1_36A2] Length = 275 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W ++ +NV L + G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDVLDKLGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 WDEW +DG +G YG Q + G Q+ ++ L+ +P SRR + W Sbjct: 93 KFWDEWKMQDGTIGKAYGYQIAK--ETFGQK-SQLHYVINELKNNPNSRRIMTEIWIPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E I + ++H+Y+ H+++ Q++R ++ IN N + F+ +D + Y+ Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRKTFEPAKIKIN-NFKSIFDFKPDDIEIIDYKYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VSYEVAI 275 >gi|256028293|ref|ZP_05442127.1| thymidylate synthase [Fusobacterium sp. D11] gi|289766222|ref|ZP_06525600.1| thymidylate synthase [Fusobacterium sp. D11] gi|289717777|gb|EFD81789.1| thymidylate synthase [Fusobacterium sp. D11] Length = 275 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W ++ +NV L + G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDILDKLGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 WDEW +DG +G YG Q + G Q+ ++ L+ +P SRR + W Sbjct: 93 KFWDEWKMQDGTIGKAYGYQIAK--ETFGQK-SQLHYVINELKNNPNSRRIMTEIWIPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E I + ++H+Y+ H+++ Q++R ++ IN N + F+ +D + Y+ Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN-NFKSIFDFKPDDVEILDYKYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VSYEVAI 275 >gi|322389617|ref|ZP_08063165.1| thymidylate synthase [Streptococcus parasanguinis ATCC 903] gi|321143616|gb|EFX39046.1| thymidylate synthase [Streptococcus parasanguinis ATCC 903] Length = 279 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D ++ G M FDL+KG FP+ T + + KS + E+LW + SN + L ++ Sbjct: 30 KDGRTANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKEMLWIYQDQSNRLDVLEDKY 89 Query: 76 GVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W + +G YG + D + I++ L +P++RR+I+S W+ Sbjct: 90 NVHYWNDWEVGNSRTIGQRYGAVVKKH--------DITNKILKQLEDNPWNRRNIISLWD 141 Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC +F +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 YEAFEETEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N FEQA+ L R P P +++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPHLVLNVPDGTNFFDIKPEDF 261 Query: 248 TLRSYEP 254 L Y+P Sbjct: 262 ELVDYDP 268 >gi|33304365|gb|AAQ02620.1| thymidylate synthase [Hartmannella cantabrigiensis] Length = 136 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 13/111 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+++ +I+ G + DRTGVGT S FG QMRF L G FPLLTTK+V WK VV ELL Sbjct: 11 YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWR 99 WF+RGD+N + L + GV IWD ++ D G +LGP+YG QWR Sbjct: 71 WFIRGDTNGANLSKKGVKIWDANGSRQFLDSRGLTQREENDLGPVYGFQWR 121 >gi|254302644|ref|ZP_04970002.1| thymidylate synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322836|gb|EDK88086.1| thymidylate synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 275 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W ++ +NV L + G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDVLDKLGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 WDEW +DG +G YG Q + G Q+ ++ L+ +P SRR + W Sbjct: 93 KFWDEWKMQDGTIGKAYGYQIAQ--ETFGQK-SQLHYVINELKKNPNSRRIMTEIWIPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E I + +VH+Y+ H+++ Q++ ++ IN N + F+ +D + Y+ Sbjct: 210 EIIWNIHNVHIYDRHYDKLIKQVNGETFEPAKIKIN-NFKSIFDFKPDDIEILDYKYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VSYEVAI 275 >gi|237739981|ref|ZP_04570462.1| thymidylate synthase [Fusobacterium sp. 2_1_31] gi|229421998|gb|EEO37045.1| thymidylate synthase [Fusobacterium sp. 2_1_31] Length = 275 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W ++ +NV+ L+ G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAAIRELYWIWILQSNNVNVLNDLGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 WDEW +DG +G YG Q + Y Q+ ++ LR +P SRR + W Sbjct: 93 KFWDEWKQEDGTIGKAYGYQ-IAQETYGQK--SQLHYVINELRKNPNSRRIMTEIWVPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ Y++L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYAVLHKLVALECGLEAA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 + I + ++H+Y+ H+++ Q++ ++ IN N + F+ +D + Y+ Sbjct: 210 DIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN-NFKSIFDFKPDDVEIVDYKYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VNYEVAI 275 >gi|251782256|ref|YP_002996558.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390885|dbj|BAH81344.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 281 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 23/249 (9%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DL+KG FP+ T + + KS + ELLW + +N + +++ Sbjct: 32 KDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELLWIYQDQTNSLDVLENKY 91 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W+EW E+G Q R+ G V+ D IS +++ L +P++RR+++S Sbjct: 92 NVHYWNEW-----EVG-----QTRTIGQRYGAVVKKHDIISKLLKQLAENPWNRRNVISL 141 Query: 133 WNV-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ A + L PC F V ++ L L QRS D+ + N Y L MM Sbjct: 142 WDYEAFEETEGLLPCAFQTMFDVRRVGEDLYLDATLTQRSNDMLVAHHINAMQYVALQMM 201 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N F QA L R P P++++N P+ + + E Sbjct: 202 IAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRQPTDCQPKLVLNVPDGTNFFDIKPE 261 Query: 246 DFTLRSYEP 254 DF L+ YEP Sbjct: 262 DFELQDYEP 270 >gi|296327655|ref|ZP_06870198.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155245|gb|EFG96019.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 275 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W ++ +NV L+ G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDVLNELGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 W+EW +DG +G YG Q + G Q+ ++ L+ +P SRR + W Sbjct: 93 KFWNEWKMQDGTIGKAYGYQIAQ--ETFGQK-SQLHYVINELKKNPNSRRIMTEIWIPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E I + ++H+Y+ H+++ Q++R ++ IN N + F+ +D + Y+ Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN-NFKSIFDFKPDDIEIIDYKYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VSYEVAI 275 >gi|322411591|gb|EFY02499.1| thymidylate synthase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 279 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 23/249 (9%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DL+KG FP+ T + + +S + ELLW + +N + +++ Sbjct: 30 KDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIQSAIKELLWIYQDQTNSLDVLENKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W+EW E+G Q R+ G V+ D IS +++ L +P++RR+++S Sbjct: 90 NVHYWNEW-----EVG-----QTRTIGQRYGAVVKKHDIISKLLKQLSENPWNRRNVISL 139 Query: 133 WNV-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ A + L PC F V +N L L QRS D+ + N Y L MM Sbjct: 140 WDYEAFEETEGLLPCAFQTMFDVRRVEENLYLDATLTQRSNDMLVAHHINAMQYVALQMM 199 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N F QA L R P P++++N P+ + + E Sbjct: 200 IAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRHPTDCQPKLVLNVPDGTNFFDIKPE 259 Query: 246 DFTLRSYEP 254 DF L+ YEP Sbjct: 260 DFELQDYEP 268 >gi|323127105|gb|ADX24402.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 279 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 23/249 (9%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DL+KG FP+ T + + KS + ELLW + +N + +++ Sbjct: 30 KDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELLWIYQDQTNSLDVLENKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W+EW E+G Q R+ G V+ D IS +++ L +P++RR+++S Sbjct: 90 NVHYWNEW-----EVG-----QTRTIGQRYGAVVKKHDIISKLLKQLAENPWNRRNVISL 139 Query: 133 WNV-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ A + L PC F V ++ L L QRS D+ + N Y L MM Sbjct: 140 WDYEAFEETEGLLPCAFQTMFDVRRVGEDLYLDATLTQRSNDMLVAHHINAMQYVALQMM 199 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N F QA L R P P++++N P+ + + E Sbjct: 200 IAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRQPTDCQPKLVLNVPDGTNFFDIKPE 259 Query: 246 DFTLRSYEP 254 DF L+ YEP Sbjct: 260 DFELQDYEP 268 >gi|237745327|ref|ZP_04575808.1| thymidylate synthase [Fusobacterium sp. 7_1] gi|229432556|gb|EEO42768.1| thymidylate synthase [Fusobacterium sp. 7_1] Length = 275 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W SN V L + G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNDVDVLDKLGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 WDEW +DG +G YG Q Q+ ++ L+ +P SRR + W Sbjct: 93 KFWDEWKMQDGTIGKAYGYQI---AQETFGQKSQLHYVINELKNNPNSRRIMTEIWIPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E I + ++H+Y+ H+++ Q++R ++ IN N + F+ +D + +Y Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN-NFKSIFDFKPDDIEIINYRYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VSYEVAI 275 >gi|260495617|ref|ZP_05815741.1| thymidylate synthase [Fusobacterium sp. 3_1_33] gi|260196800|gb|EEW94323.1| thymidylate synthase [Fusobacterium sp. 3_1_33] Length = 275 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W SN V L + G Sbjct: 33 DGTAAYYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNDVDVLDKLGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 WDEW +DG +G YG Q Q+ ++ L+ +P SRR + W Sbjct: 93 KFWDEWKMQDGTIGKAYGYQI---AQETFGQKSQLHYVINELKNNPNSRRIMTEIWIPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 E I + ++H+Y+ H+++ Q++R ++ IN N + F+ +D + Y+ Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN-NFKSIFDFKPDDVEILDYKYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VSYEVAI 275 >gi|312865238|ref|ZP_07725466.1| thymidylate synthase [Streptococcus downei F0415] gi|311099349|gb|EFQ57565.1| thymidylate synthase [Streptococcus downei F0415] Length = 279 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 19/231 (8%) Query: 35 RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKD-GEL 90 ++DLSKG FP+ T + + KS + E+ W + SN L ++ V W++W D G + Sbjct: 46 QYDLSKGEFPITTLRPIPIKSAIKEIFWIYQDQSNDLDLLNEKYQVKYWNDWEVGDTGTI 105 Query: 91 GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALIDKMALPPC--H 147 G YG + D I+ I++ L +P++RR+++S W+ A + L PC Sbjct: 106 GQRYGAVVKKH--------DIINKILKQLAENPWNRRNVISLWDYEAFEESEGLLPCAFQ 157 Query: 148 CLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 +F +G L L QRS D+ + N Y L MM+A G++ G+F + + + Sbjct: 158 TMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNN 217 Query: 206 VHLYNNHFEQADLQLSRSPR-TLPQMIIN-PNIVDLLSFRYEDFTLRSYEP 254 +H+Y+N F+QA L+R+P P++I++ P+ + + EDF L YEP Sbjct: 218 LHIYDNQFDQAQELLNRTPADKEPRLILDVPDGTNFFDIKPEDFQLLDYEP 268 >gi|171778303|ref|ZP_02919509.1| hypothetical protein STRINF_00351 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283003|gb|EDT48427.1| hypothetical protein STRINF_00351 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 279 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 124/243 (51%), Gaps = 23/243 (9%) Query: 24 VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIW 80 ++ G +DLSKG FP+ T + + KS + E+ W + +N +S L+ ++ V W Sbjct: 35 ANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYW 94 Query: 81 DEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALI 138 ++W D G +G YG + D I I++ L +P++RR+++S W+ A Sbjct: 95 NDWEVDGTGTIGERYGAVVKKH--------DIIRKILKQLEENPWNRRNVISLWDYEAFE 146 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMMLASVI 192 + L PC FQ D ++ +Y QRS D+ + N Y L MM+A Sbjct: 147 NTDGLLPC--AFQTMYDVRRVDGDIYLDATLTQRSNDMLVSHHINAMQYVALQMMIAKHF 204 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDFTLR 250 G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ D + EDF L Sbjct: 205 GWKVGKFFYFVNNLHIYDNQFEQAEELLRREPTDCKPRLVLNVPDGTDFFDIKPEDFELV 264 Query: 251 SYE 253 Y+ Sbjct: 265 DYD 267 >gi|33304359|gb|AAQ02616.1| thymidylate synthase [Hartmannella cantabrigiensis] Length = 136 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 73/111 (65%), Gaps = 13/111 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+++ +I+ G + DRTGVGT S FG QMRF L G FPLLTTK+V WK VV ELL Sbjct: 11 YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWR 99 WF+RGD N + L + GV IWD ++ D G +LGP+YG QWR Sbjct: 71 WFIRGDINGANLSKKGVKIWDANGSRQFLDSRGLTQREENDLGPVYGFQWR 121 >gi|15673523|ref|NP_267697.1| thymidylate synthase [Lactococcus lactis subsp. lactis Il1403] gi|281492105|ref|YP_003354085.1| thymidylate synthase [Lactococcus lactis subsp. lactis KF147] gi|13638515|sp|P19368|TYSY_LACLA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|12724542|gb|AAK05639.1|AE006385_1 thymidylate synthase [Lactococcus lactis subsp. lactis Il1403] gi|13310416|gb|AAK18280.1|AF336368_1 thymidylate synthase [Lactococcus lactis subsp. lactis] gi|281375788|gb|ADA65285.1| Thymidylate synthase [Lactococcus lactis subsp. lactis KF147] Length = 279 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD-SNVSYLH-RH 75 +D ++ G + +DL KG FP+ T + + KS + EL+W + S ++ L ++ Sbjct: 30 KDGQTANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKELMWIYQDQTSELAILEEKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 GV W EW DG +G YG + + + I ++ L +P++RR+I++ W Sbjct: 90 GVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLDGLAKNPWNRRNIINLWQY 141 Query: 136 ALIDKM-ALPPCHCLFQFYV---DNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC F V +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 EDFEETEGLLPCAFQTMFDVRREQDGQIYLDATLIQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQMIIN-PNIVDLLSFRYEDF 247 ++ G+F + + ++H+Y+N FEQA+ + R+ P++++N P+ + + EDF Sbjct: 202 KHFSWKVGKFFYFVNNLHIYDNQFEQANELVKRTASDKEPRLVLNVPDGTNFFDIKPEDF 261 Query: 248 TLRSYEP 254 L YEP Sbjct: 262 ELVDYEP 268 >gi|326407008|gb|ADZ64079.1| thymidylate synthase [Lactococcus lactis subsp. lactis CV56] Length = 279 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD-SNVSYLH-RH 75 +D ++ G + +DL KG FP+ T + + KS + EL+W + S ++ L ++ Sbjct: 30 KDGQTANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKELMWIYQDQTSELAILEEKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 GV W EW DG +G YG + + + I ++ L +P++RR+I++ W Sbjct: 90 GVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLDGLAKNPWNRRNIINLWQY 141 Query: 136 ALIDKM-ALPPCHCLFQFYV---DNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ L PC F V +G+ L L QRS D+ + N Y L MM+A Sbjct: 142 EDFEETEGLLPCAFQTMFDVRCEQDGQIYLDATLIQRSNDMLVAHHINAMQYVALQMMIA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQMIIN-PNIVDLLSFRYEDF 247 ++ G+F + + ++H+Y+N FEQA+ + R+ P++++N P+ + + EDF Sbjct: 202 KHFSWKVGKFFYFVNNLHIYDNQFEQANELVKRTASDKEPRLVLNVPDGTNFFDIKPEDF 261 Query: 248 TLRSYEP 254 L YEP Sbjct: 262 ELVDYEP 268 >gi|225870473|ref|YP_002746420.1| thymidylate synthase [Streptococcus equi subsp. equi 4047] gi|225699877|emb|CAW93768.1| thymidylate synthase [Streptococcus equi subsp. equi 4047] Length = 279 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 128/253 (50%), Gaps = 29/253 (11%) Query: 19 RDRTGVGTRSTF--GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--H 73 R + G S + G +DLSKG FP+ T + + KS + EL W + SN + + Sbjct: 28 RYKNGQTANSKYITGAFAEYDLSKGEFPITTLRSIPIKSAIKELFWIYQDQSNSLDVLEN 87 Query: 74 RHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIV 130 ++ V W+EW E+G Q R+ G ++ D IS I++ L +P++RR+++ Sbjct: 88 KYNVHYWNEW-----EVG-----QTRTIGQRYGAIVKKHDIISKILKQLEDNPWNRRNVI 137 Query: 131 SAWNV-ALIDKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSL 183 S W+ A + L PC FQ D ++ +LY QRS D+ + N Y Sbjct: 138 SLWDYEAFEESEGLLPC--AFQVMFDVRRVDGELYLDATLTQRSNDMLVAHHINAMQYVA 195 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLS 241 L +M+A G++ G+F + + ++H+Y+N F QA L R P P+++++ P+ D Sbjct: 196 LQLMIAKHFGWKAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKLLLHVPDGTDFFD 255 Query: 242 FRYEDFTLRSYEP 254 R EDF L+ Y P Sbjct: 256 IRPEDFELQDYYP 268 >gi|294782923|ref|ZP_06748249.1| thymidylate synthase [Fusobacterium sp. 1_1_41FAA] gi|294481564|gb|EFG29339.1| thymidylate synthase [Fusobacterium sp. 1_1_41FAA] Length = 275 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W ++ +NV L+ G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSGDEAHLITSRFAPSKAAIRELYWIWILQSNNVDVLNDLGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 WDEW +DG +G YG Q + Y Q+ ++ L+ +P SRR + W Sbjct: 93 KFWDEWKQEDGTIGKAYGYQ-IAQETYGQK--SQLHYVINELKKNPNSRRIMTEIWVPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ Y++L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYAVLHKLVALECGLEAA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 + I + ++H+Y+ H+++ Q++ ++ IN N + F+ +D + Y+ Sbjct: 210 DIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN-NFKSIFDFKPDDVEIVDYKYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VNYEVAI 275 >gi|29135171|ref|NP_803801.1| ORF235 [Pseudomonas phage phiKZ] gi|18996700|gb|AAL83136.1|AF399011_235 PHIKZ235 [Pseudomonas phage phiKZ] Length = 488 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 91/174 (52%), Gaps = 19/174 (10%) Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 I G R P +D +Q+ ++++ R + V W +D+ P Sbjct: 332 ISGEITRGQPPFDS--AEQVKALLRVCRGYEKATDEAVVEW----LDQHGAP-------- 377 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 +SCQLYQRS D FLG PFNI YSLLT MLA+ + EFI T GDVH+Y+NH Sbjct: 378 ---KRAISCQLYQRSCDTFLGKPFNITFYSLLTHMLANQMNMIAEEFIWTGGDVHIYSNH 434 Query: 213 FEQADLQLSRSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILAKVSV 264 EQ DLQL+R P+ LP + + D+ +DF + +YE H+ I KV+V Sbjct: 435 QEQTDLQLTREPKVLPTIRFKQEAIGKDIREIGVDDFVIENYEYHSHIAGKVAV 488 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 M QYL+ +R V + G + DRTG GT+S FG Q R+ L P++TTKK+H SV+HEL Sbjct: 1 MEQYLNSIRLVKEHGVHKGDRTGTGTQSMFGQQERYSLRNNRLPVVTTKKIHLASVIHEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD 87 W L GD+ V YL +GV IW+EW + Sbjct: 61 FWMLSGDTKVDYLIANGVRIWNEWVKPE 88 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 33/100 (33%) Query: 88 GELGPIYGVQWRS-----------WPDYDGNVIDQISSI--------------------- 115 G+LG +YG WR+ W DY+ D ++ I Sbjct: 207 GDLGAVYGKTWRNLEDTRVIPKYEWFDYEKRGFDFVADIPGTTMETDRCVVTRRIDQIQD 266 Query: 116 -VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154 + LR +P SRR IV AW LID+ ALPPCH QF+ Sbjct: 267 IIDQLRTNPDSRRIIVCAWAPHLIDEQALPPCHAFIQFWT 306 >gi|319939274|ref|ZP_08013637.1| thymidylate synthase [Streptococcus anginosus 1_2_62CV] gi|319811670|gb|EFW07946.1| thymidylate synthase [Streptococcus anginosus 1_2_62CV] Length = 279 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 23/256 (8%) Query: 14 FGSDRRDRTGVG----TRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN 68 F + R R G ++ G +DLSKG FP+ T + + KS + E+LW + SN Sbjct: 21 FSENARPRYKNGKVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSN 80 Query: 69 VSYL--HRHGVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYS 125 + ++ V W++W D +G YG + D I+ I++ L +P++ Sbjct: 81 SLDILEEKYNVHYWNDWEVGDTRTIGLRYGAVVKKH--------DIINKILKQLEINPWN 132 Query: 126 RRHIVSAWNV-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIAS 180 RR+I+S W+ A + L PC +F +G L L QRS D+ + N Sbjct: 133 RRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQ 192 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQMIIN-PNIVD 238 Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P LP++++N P+ + Sbjct: 193 YVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPTDCLPRLVLNVPDGTN 252 Query: 239 LLSFRYEDFTLRSYEP 254 + E+F L Y P Sbjct: 253 FFDIKAENFELVDYIP 268 >gi|262067031|ref|ZP_06026643.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693] gi|291379240|gb|EFE86758.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693] Length = 275 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 125/247 (50%), Gaps = 6/247 (2%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77 D T +S GYQ R D S L+T++ K+ + EL W ++ +NV+ L+ G Sbjct: 33 DGTAAHYKSYIGYQFRLDNSGDEAHLITSRFAPSKAPIRELYWIWILQSNNVNILNDLGC 92 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 WDEW +DG +G YG Q + Y Q+ ++ L+ +P SRR + W Sbjct: 93 KFWDEWKQEDGTIGKAYGYQ-IAQETYGQK--SQLHYVINELKKNPNSRRIMTEIWVPNE 149 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + +MAL PC L Q+ V KL ++ QRS DV LG+ N+ Y++L ++A G + Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYAVLHKLVALECGLEAA 209 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 + I + ++H+Y+ H+++ Q++ ++ IN N + F+ +D + Y+ Sbjct: 210 DIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN-NFKSIFDFKPDDVEIVDYKYGEK 268 Query: 258 ILAKVSV 264 + +V++ Sbjct: 269 VSYEVAI 275 >gi|329117733|ref|ZP_08246450.1| thymidylate synthase [Streptococcus parauberis NCFD 2020] gi|326908138|gb|EGE55052.1| thymidylate synthase [Streptococcus parauberis NCFD 2020] Length = 279 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 122/247 (49%), Gaps = 19/247 (7%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G +DLSKG FP+ T + + KS + ELLW + SN + ++ Sbjct: 30 KDGKTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKELLWIYQDQSNSLDILEEKY 89 Query: 76 GVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 V W++W D +G YG + D I+ I++ L +P++RR+++S W+ Sbjct: 90 NVHYWNDWEVGDTRTIGQRYGAVVKKH--------DIINKILKQLEDNPWNRRNVISLWD 141 Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 A + L PC +F +G L L QRS D+ + N Y L MM+A Sbjct: 142 YQAFEESEGLLPCAFQTMFDVRRVDGTIYLDATLVQRSNDMLVAHHINAMQYVALQMMVA 201 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQMIIN-PNIVDLLSFRYEDF 247 G++ G+F + + ++H+Y+N F QA+ L R +PQ+++N P+ + + EDF Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFPQAEELLRRKESDCMPQLMLNVPDGTNFFDIKAEDF 261 Query: 248 TLRSYEP 254 L Y P Sbjct: 262 ELIDYSP 268 >gi|255635545|gb|ACU18123.1| unknown [Glycine max] Length = 139 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/108 (50%), Positives = 69/108 (63%), Gaps = 12/108 (11%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L++ +I G+ + DRTG GT S FG QMRF+L FPLLTTKKV W+ VV ELLWF+ Sbjct: 11 YLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVEELLWFI 70 Query: 64 RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWR 99 G +N L G+ IWD E+ D ++G+LGP+YG QWR Sbjct: 71 SGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWR 118 >gi|253582886|ref|ZP_04860104.1| thymidylate synthase [Fusobacterium varium ATCC 27725] gi|251835092|gb|EES63635.1| thymidylate synthase [Fusobacterium varium ATCC 27725] Length = 276 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 118/254 (46%), Gaps = 20/254 (7%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77 D T +S GYQ R D S L+TT+ K+ + EL W SN V L++ Sbjct: 34 DGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPNKAPIRELYWIWIMQSNDVDELNKLKC 93 Query: 78 SIWDEWADKDGELGPIYGVQ-------WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 WDEW DG +G YG Q ++S DY ++ L+ +P SRR + Sbjct: 94 KFWDEWKMNDGTIGKAYGYQIAKQTFGYKSQLDY----------VIGELKKNPNSRRIMT 143 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 W +DKMAL PC L Q+ V KL ++ QRS DV LG+ N+ YS+L ++A Sbjct: 144 EIWVPEDLDKMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSILHKLVAM 203 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 + E I + +VH+Y+ H Q+ R P + N + F+ +D + Sbjct: 204 ECNLEPAEIIWNIHNVHIYDRHMPDLLEQIKR-PSIDGATVKIENFKSIYDFKPDDVVVE 262 Query: 251 SYEPHAAILAKVSV 264 +Y+ I +V++ Sbjct: 263 NYQYGEKISYEVAI 276 >gi|225868468|ref|YP_002744416.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus] gi|225701744|emb|CAW99116.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus] Length = 279 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 31/254 (12%) Query: 19 RDRTGVGTRSTF--GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--H 73 R + G S + G +DLSKG FP+ T + + KS + EL W + SN + + Sbjct: 28 RYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEN 87 Query: 74 RHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIV 130 ++ V W+EW E+G Q R+ G ++ D IS I++ L +P++RR+++ Sbjct: 88 KYNVHYWNEW-----EVG-----QTRTIGQRYGAIVKKHDIISKILKQLEDNPWNRRNVI 137 Query: 131 SAWNVAL--IDKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYS 182 S W+ + + LP C FQ D ++ +LY QRS D+ + N Y Sbjct: 138 SLWDYEAFEVSEGLLP---CAFQVMFDVRRVDGELYLDATLTQRSNDMLVAHHINAMQYV 194 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLL 240 L +M+A G++ G+F + + ++H+Y+N F QA L R P P+++++ P+ D Sbjct: 195 ALQLMIAKHFGWRAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKLLLHVPDGTDFF 254 Query: 241 SFRYEDFTLRSYEP 254 R EDF L+ Y P Sbjct: 255 DIRPEDFELQDYHP 268 >gi|21700303|gb|AAM75811.1|AF450268_1 bifunctional dihydrofolate reductase-thymidylate synthase [Amastigomonas debruynei] Length = 259 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 12/107 (11%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL+R V+ G +R DRTGVGT S FG ++ FDL GFPLLTTK+V W+ V ELLWF+ Sbjct: 148 YLDLIRRVLADGFERDDRTGVGTFSLFGEKLEFDLGDGFPLLTTKRVFWRGVAEELLWFV 207 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQW 98 G +N + L G+ IWD + ++ G+LGP+YG QW Sbjct: 208 SGSTNANELAAKGIRIWDGNSSREYLDSIGLTEREVGDLGPVYGFQW 254 >gi|33304368|gb|AAQ02622.1| thymidylate synthase [Hartmannella cantabrigiensis] Length = 136 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 13/111 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+++ +I+ G + DRTGVGT S FG QMRF L G FPLLTTK+V WK VV ELL Sbjct: 11 YQYLEMIDDIIRHGVRKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWR 99 WF+RGD+N + L + G IWD ++ D G +LGP+YG QWR Sbjct: 71 WFIRGDTNGANLSKKGDKIWDANGSRQFLDSRGLTHREENDLGPVYGFQWR 121 >gi|33304362|gb|AAQ02618.1| thymidylate synthase [Hartmannella cantabrigiensis] Length = 136 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 13/111 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+++ +I+ G + DRTGVGT S FG QMRF L G FPLLTTK+V WK VV ELL Sbjct: 11 YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWR 99 WF+RGD+N + L + GV I D ++ D G +LGP+YG QWR Sbjct: 71 WFIRGDTNGANLSKKGVKICDANGSRQFLDSRGLTQREENDLGPVYGFQWR 121 >gi|222152932|ref|YP_002562109.1| thymidylate synthase [Streptococcus uberis 0140J] gi|222113745|emb|CAR41747.1| thymidylate synthase [Streptococcus uberis 0140J] Length = 279 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 25/263 (9%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTF--GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFL 63 L+ V+ + + + G S + G +DLSKG FP+ T + + KS + ELLW Sbjct: 16 LMDGVLSENARPKYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKELLWIY 75 Query: 64 RGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQS 118 + SN + +++ V W++W E+G + R G ++ D ++ I++ Sbjct: 76 QDQSNSLDVLENKYNVHYWNDW-----EVGTTRTIGQRY-----GAIVKKHDIMTKILKQ 125 Query: 119 LRADPYSRRHIVSAWNV-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLG 173 L +P++RR+IVS W+ A + L PC +F NG+ L L QRS D+ + Sbjct: 126 LSDNPWNRRNIVSLWDYEAFEESEGLLPCAFQTMFDVRRVNGEIYLDATLVQRSNDMLVA 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMII 232 N Y MM+A G++ G+F + + ++H+Y+N F QA+ L R PQ+++ Sbjct: 186 HHINAMQYVAFQMMIAKHFGWKLGKFFYFVNNLHIYDNQFPQAEELLKREESDCHPQLVL 245 Query: 233 N-PNIVDLLSFRYEDFTLRSYEP 254 N P+ + R EDF L Y P Sbjct: 246 NVPDGTNFFDIRPEDFELLDYNP 268 >gi|327197801|ref|YP_004301499.1| gp165 [Brochothrix phage A9] gi|299810401|gb|ADJ53200.1| gp165 [Brochothrix phage A9] Length = 304 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 40/269 (14%) Query: 3 QYLDLLRHVIKFGSDRRDR----TGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVH 57 QYLD L + G D R G R M L ++ L+ K V K + Sbjct: 6 QYLDGLFRIFDEGHDEPARGHYQDGTQARHLIIPSMEITLKAEETGRLSLKHVGAKDPIK 65 Query: 58 ELLW-FLRGDSNVSYLHRHGVSIWDE--WADKDGELGPIYGVQWRSWPDYDGNV------ 108 E+LW + + S+V+ L G +W+ W + + P YG Q G Sbjct: 66 EMLWIYQKASSDVTELQEMGCKVWNNTAWHSSENNIAPAYGHQIAKITRVKGKTEQILAY 125 Query: 109 ----------------------IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 ++Q+ ++ L DP+S+R WNV+ +D M LPPC Sbjct: 126 QQAMYGVPIHDSLLPKAINTFKMNQMHRVIWDLVNDPHSKRIATELWNVSDLDDMVLPPC 185 Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206 ++ V GKL ++ QRS D +G+P+NI + +L M++ G G+++H + +V Sbjct: 186 VHRTEWSVIGGKLHLKVLQRSADYCVGVPYNIYQFDVLRRMVSVATGIPLGDYVHNMSNV 245 Query: 207 HLYNNH----FEQADLQLSRSPRTLPQMI 231 H+Y+ H FE A + P T P I Sbjct: 246 HIYDRHIPDAFEMAKTDVDSIPETKPVSI 274 >gi|195978199|ref|YP_002123443.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974904|gb|ACG62430.1| thymidylate synthase ThyA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 279 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 29/253 (11%) Query: 19 RDRTGVGTRSTF--GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--H 73 R + G S + G +DLSKG FP+ T + + KS + EL W + SN + + Sbjct: 28 RYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEN 87 Query: 74 RHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIV 130 ++ V W+EW E+G Q R+ G ++ D IS I++ L +P++RR+++ Sbjct: 88 KYNVHYWNEW-----EVG-----QTRTIGQRYGAIVKKHDIISKILKQLEDNPWNRRNVI 137 Query: 131 SAWNV-ALIDKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSL 183 S W+ A + L PC FQ D ++ +LY QRS D+ + N Y Sbjct: 138 SLWDYEAFEESEGLLPC--AFQVMFDVRRVDGELYLDATLTQRSNDMLVAHHINAMQYVA 195 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLS 241 L +M+A G++ G+F + + ++H+Y+N F QA L R P P+++++ P+ Sbjct: 196 LQLMIAKHFGWRAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKLLLHVPDGTAFFD 255 Query: 242 FRYEDFTLRSYEP 254 R EDF L+ Y P Sbjct: 256 IRPEDFELQDYHP 268 >gi|315221690|ref|ZP_07863606.1| thymidylate synthase [Streptococcus anginosus F0211] gi|315189177|gb|EFU22876.1| thymidylate synthase [Streptococcus anginosus F0211] Length = 279 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 23/256 (8%) Query: 14 FGSDRRDRTGVG----TRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN 68 F + R R G ++ G +DLSKG FP+ T + + KS + E+LW + SN Sbjct: 21 FSENARPRYKNGKVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSN 80 Query: 69 VSYL--HRHGVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYS 125 + ++ V W++W D +G YG + D I+ I++ L +P++ Sbjct: 81 SLDILEEKYNVHYWNDWEVGDTRTIGLRYGAVVKKH--------DIINKILKQLEINPWN 132 Query: 126 RRHIVSAWNV-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIAS 180 RR+I+S W+ A + L PC +F +G L L QRS D+ + N Sbjct: 133 RRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQ 192 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVD 238 Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++++N P+ + Sbjct: 193 YVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAKELLRREPTNCTPRLVLNVPDGTN 252 Query: 239 LLSFRYEDFTLRSYEP 254 + E F L Y+P Sbjct: 253 FFDIKAEYFELVDYDP 268 >gi|255019274|ref|ZP_05291400.1| thymidylate synthase [Listeria monocytogenes FSL F2-515] Length = 78 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 47/75 (62%), Positives = 61/75 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRH 75 WFL GD+N+ YL +H Sbjct: 61 WFLHGDTNIRYLLQH 75 >gi|21700315|gb|AAM75817.1|AF450274_1 bifunctional dihydrofolate reductase-thymidylate synthase [Tetrahymena sp.] Length = 311 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 13/109 (11%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL++ V+ G R DRTG GT S FG MRFDLS G FPLLTTKK + + EL W Sbjct: 198 QYLDLVQRVVSTGVSRGDRTGTGTLSIFGAMMRFDLSSGAFPLLTTKKTFLRGIAEELFW 257 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQW 98 FL+GD++ + L V IWD A + +G+LGP+YG QW Sbjct: 258 FLKGDTSQTRLAAKDVHIWDANATRAFLDARGLPDRPEGDLGPVYGCQW 306 >gi|332975814|gb|EGK12693.1| thymidylate synthase [Psychrobacter sp. 1501(2011)] Length = 102 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/95 (52%), Positives = 65/95 (68%) Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 +FLG+PFNIASYSLLT M+A V + GEFI T GD HLY NH EQ + QLSR LP Sbjct: 8 IFLGVPFNIASYSLLTHMIAQVCDLEVGEFIWTGGDCHLYQNHIEQVNEQLSREAYELPT 67 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +NP+I D+ F ++D + +Y+ H AI A V+V Sbjct: 68 LWLNPDIKDIFDFTFDDIRVENYKSHPAIKAPVAV 102 >gi|115299486|gb|ABI93713.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] gi|115299492|gb|ABI93716.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] Length = 95 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/95 (52%), Positives = 64/95 (67%), Gaps = 8/95 (8%) Query: 92 PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN + + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 PPCH + QF+V NGKLSC +YQRS D LGIPFNI Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95 >gi|115299484|gb|ABI93712.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] Length = 95 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/95 (52%), Positives = 64/95 (67%), Gaps = 8/95 (8%) Query: 92 PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN + + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDCQSDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 PPCH + QF+V NGKLSC +YQRS D LGIPFNI Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95 >gi|115299490|gb|ABI93715.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] Length = 95 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 8/95 (8%) Query: 92 PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDRQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 PPCH + QF+V NGKLSC +YQRS D LGIPFNI Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95 >gi|115299488|gb|ABI93714.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] Length = 95 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 8/95 (8%) Query: 92 PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 PPCH + QF+V NGKLSC +YQRS D LGIPFNI Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95 >gi|295099624|emb|CBK88713.1| Thymidylate synthase [Eubacterium cylindroides T2-87] Length = 231 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 30/216 (13%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G +RTG+ T + ++ + FP+LTTK++ + V E+LW Sbjct: 8 YCQLCENILTNGVQVANRTGIDTIKLPSAHFQLNVGEEFPILTTKQLFIRQAVLEMLWIY 67 Query: 64 RGDSN-VSYLHRHGVSIWDEWA---------DKDGE------------LGPIYGVQWRSW 101 + SN V +L V IWD W +K GE +G YG Sbjct: 68 QAQSNDVRWLQERNVHIWDLWQIDENGDWRDEKTGEVLKHFDPKFANTIGTAYG------ 121 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 Y + ++ SL+ + RR ++S W +D LP C ++ V NG L+ Sbjct: 122 --YIVKRFKLMDRLIDSLKNNVNDRRRVISLWQDEYLDTAVLPSCVWSSEWDVTNGTLNA 179 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 ++QRS DV LG+PFN+ Y++L MLA V G + G Sbjct: 180 WVHQRSCDVPLGLPFNVTQYAVLLKMLAQVTGLKAG 215 >gi|326536756|ref|YP_004301187.1| Td thymidylate synthetase [Aeromonas phage 65] gi|312263102|gb|ADQ53358.1| Td thymidylate synthetase [Aeromonas phage 65] Length = 313 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 19/252 (7%) Query: 3 QYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +Y +L+ +V G+D RTG R+ + M +D P+++ K+V +K + E + Sbjct: 35 EYYNLVHYVYNHGTDIFNKRTGFVCRTIPTHVMVYDRC---PMISHKQVFFKMFIAEFIG 91 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDGNVI 109 +LRG ++ G WD A++ + ++G +YG R + G Sbjct: 92 YLRGYTSAKQFRDLGTRTWDANANETKAWLINPNRKGEDDMGNVYGSIARDFG-AKGGQY 150 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 D + + + L+ +R I++ W+ + D+ L PC + QF + L YQRS D Sbjct: 151 DLLWDVYEDLQKGIDNRGEIITFWDPSRFDEGCLRPCMMMHQFQLIGDTLHLTSYQRSTD 210 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-- 227 + LG P N+ ++A + G + G+ H + ++H+Y N FE + L+R P T+ Sbjct: 211 ILLGGPANMLQAWFFLELMARITGHKIGKVTHVMNNIHIYENQFESCEEFLNRVPHTMNN 270 Query: 228 PQMIINPNIVDL 239 P ++ + VDL Sbjct: 271 PSLVFDDKCVDL 282 >gi|115299502|gb|ABI93721.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] gi|115299510|gb|ABI93725.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] Length = 96 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 8/96 (8%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +L P+YG QWR + DY+ +DQ+ ++Q L+ +P SRR I+SAWN + + + Sbjct: 1 DLDPVYGFQWRHFGAEYKDCQSDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQ 60 Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 MALPPCH + QF+V NGKLSC +YQRS D LGIPF Sbjct: 61 MALPPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPF 96 >gi|115299512|gb|ABI93726.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] Length = 93 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 8/93 (8%) Query: 92 PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY+ +DQ+ ++Q L+ +P SRR I+SAWN + +++MAL Sbjct: 1 PVYGYQWRHFGAEYKDCQSDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLEQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 PPCH + QF+V NGKLSC +YQRS D+ LGIPF Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQRSCDLGLGIPF 93 >gi|225734443|gb|ACO25211.1| thymidylate synthase [Epizootic haematopoietic necrosis virus] Length = 95 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/93 (50%), Positives = 62/93 (66%) Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASYSLLT M+A V G + GEF+H LGD H+Y ++ E QL R PR P + Sbjct: 3 LGVPFNIASYSLLTYMMAHVTGLEPGEFVHNLGDAHVYLDNVEPLKTQLEREPRPFPTLR 62 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 IN + L F+ EDF+L Y+PH AI +++V Sbjct: 63 INRRVESLDDFKAEDFSLEGYDPHPAIRMRMAV 95 >gi|238602652|ref|XP_002395739.1| hypothetical protein MPER_04156 [Moniliophthora perniciosa FA553] gi|215466985|gb|EEB96669.1| hypothetical protein MPER_04156 [Moniliophthora perniciosa FA553] Length = 110 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 KLSC +YQRS D+ LGIPFNIASY+LL M+A V G + E I LGD H+Y +H + Sbjct: 3 KLSCLMYQRSADLGLGIPFNIASYALLVHMMAQVTGTEPHELIIQLGDAHVYRDHVDALK 62 Query: 218 LQLSRSPRTLPQMI-INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R PR P++ I D+ F Y DF + Y+P+ +I K+SV Sbjct: 63 TQLEREPRPFPKLKWAREGINDIEDFVYSDFVVEGYDPYPSIPMKMSV 110 >gi|45686030|ref|YP_003793.1| thymidylate synthase [Ambystoma tigrinum virus] gi|37722454|gb|AAP33199.1| thymidylate synthase [Ambystoma tigrinum stebbensi virus] Length = 95 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/93 (50%), Positives = 61/93 (65%) Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 G+PFNIASY LLT M+A V G + GEF+HTLGD H+Y +H E QL R PR P + Sbjct: 3 FGVPFNIASYFLLTYMMAYVTGLEPGEFVHTLGDAHVYLDHVEPLKTQLEREPRPFPTLR 62 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 IN + L F+ EDF+L Y+PH AI +++V Sbjct: 63 INRRVESLDDFKAEDFSLEGYDPHPAIRMRMAV 95 >gi|167837402|ref|ZP_02464285.1| thymidylate synthase [Burkholderia thailandensis MSMB43] Length = 193 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 13/171 (7%) Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY--VDNGKLSCQLY 164 IDQ+ + ++ DP SRR + WN A++D++ALP CH L+QF V+ ++S LY Sbjct: 23 KAIDQLRDCLDTIVRDPSSRRILFHGWNPAVLDEIALPACHLLYQFLPNVERREISLCLY 82 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 RS DV LG PFN+A + L ++ + G+ F + +GD H+Y N + QL R P Sbjct: 83 IRSNDVGLGTPFNLAEGAALLTLVGRLTGYTPRWFTYFIGDAHIYENQLDMLKQQLEREP 142 Query: 225 RTLPQMIINPNIVD-----------LLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I + D L DF L Y H + A ++V Sbjct: 143 FESPRLEIAERVPDYAKTGEYEPQWLERIEPSDFALVGYRHHEPLTAPMAV 193 >gi|115299496|gb|ABI93718.1| dihydrofolate reductase-thymidylate synthase [Paramecium primaurelia] Length = 93 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 8/93 (8%) Query: 92 PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN I +MAL Sbjct: 1 PVYGFQWRHFGAQYKDCQSDYTNQGVDQVKEIIQQLKNNPDSRRIILSAWNPMDIKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 PPCH + QF+V NGKL+C +YQRS D LGIPF Sbjct: 61 PPCHVMSQFFVSNGKLNCMMYQRSCDFGLGIPF 93 >gi|225075851|ref|ZP_03719050.1| hypothetical protein NEIFLAOT_00874 [Neisseria flavescens NRL30031/H210] gi|224952797|gb|EEG34006.1| hypothetical protein NEIFLAOT_00874 [Neisseria flavescens NRL30031/H210] Length = 309 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 29/257 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY+ LL+ ++ R +RTG + Q + FP LT ++ +WKS V E+L Sbjct: 21 QQYVQLLKDLLDAPLVRNERTGTACHTIINPQSFTYTADDFPALTIRRSYWKSAVAEMLG 80 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVI 109 ++RG ++ G WD A+++ ++G +YG S+ Sbjct: 81 YIRGYTSAKDFRELGTKTWDANANQNPAWLANPHRAGVDDMGLVYGAVGNSFTGL----- 135 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 + I++++ A +R I S WN + DK L PC QF + NG L QRS D Sbjct: 136 -SFTDIMRAIHARQDNRGLIWSFWNPDVFDKGCLRPCMYSHQFSIVNGTLYLTSTQRSCD 194 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 V LG+ FN+ L ++ ++ G ++G H + + H+Y N + + + Sbjct: 195 VPLGLTFNMIQCWFLLYLVCTLTGLKFGHARHNIVNAHIYENQVD-----------AVRE 243 Query: 230 MIINPNIVDLLSFRYED 246 MI NP + + F++ D Sbjct: 244 MIANPLLPRSIKFQHVD 260 >gi|21700305|gb|AAM75812.1|AF450269_1 bifunctional dihydrofolate reductase-thymidylate synthase [cf. 'Cafeteria' marsupialis 'Wood's Hole'] Length = 268 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/109 (48%), Positives = 67/109 (61%), Gaps = 13/109 (11%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61 QYL+ +R ++ G DR DRTG GT S FG MRF L PL+TTKKV W+ VV ELLW Sbjct: 155 QYLNAIRDILDNGVDRSDRTGTGTLSKFGLHMRFSLRDNTLPLITTKKVFWRGVVEELLW 214 Query: 62 FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQW 98 F+RG ++ L GV IWD E+ D ++G+LGP+YG QW Sbjct: 215 FVRGFTDSKLLSAKGVHIWDGNGSREYLDSRGLFHNEEGDLGPVYGFQW 263 >gi|21700313|gb|AAM75816.1|AF450273_1 bifunctional dihydrofolate reductase-thymidylate synthase [Diplonema ambulator] Length = 255 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/110 (50%), Positives = 66/110 (60%), Gaps = 13/110 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL+ +IK G + DRTGVGT S FG QMRF L G PLLTTK+V WK V EL Sbjct: 141 QQYLDLVDDIIKNGFTKGDRTGVGTISKFGAQMRFSLRDGVIPLLTTKRVFWKGVAEELF 200 Query: 61 WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQW 98 WF++G +N L GV IWD + D G +LGPIYG+QW Sbjct: 201 WFIKGCTNGKDLKDKGVHIWDGNGTRAFLDSRGLPDRAEDDLGPIYGLQW 250 >gi|15193286|gb|AAK91762.1|AF406763_2 thymidylate synthase [Streptococcus thermophilus] Length = 268 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 16/242 (6%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75 +D T ++ G +DLSKG FP+ T + + KS + E+ + +N + L ++ Sbjct: 30 KDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVXXXXQDQTNSLDVLEDKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W++W + E P RS G V+ D I+ ++ L A+P++RR+++S Sbjct: 90 NVHYWNDW---EVEGVPANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146 Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ +++ A L PC F V ++ L L QRS D+ + N Y L MM Sbjct: 147 WDYEALEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSNDMLVAHHINAMQYVALQMM 206 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A G++ G+F + + ++H+Y+N FEQA+ L R P P++++N P+ + + E Sbjct: 207 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLVLNVPDETNFFDIKPE 266 Query: 246 DF 247 D Sbjct: 267 DI 268 >gi|21700309|gb|AAM75814.1|AF450271_1 bifunctional dihydrofolate reductase-thymidylate synthase [Chlamydaster sterni] Length = 260 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 50/111 (45%), Positives = 65/111 (58%), Gaps = 13/111 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFD-LSKGFPLLTTKKVHWKSVVHELL 60 QYLDL+ +I G+ R DRTG GT S FG QMRF PLLTTKKV W+ V E+L Sbjct: 146 KQYLDLVDRIITSGTQRGDRTGTGTLSIFGTQMRFSPRDDTLPLLTTKKVFWRGVAEEML 205 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR 99 WF++G ++ L + IWD+ A + +G+LGP+YG QWR Sbjct: 206 WFMKGCTDARVLSAKKIHIWDDNASRKFLDENGLSHREEGDLGPVYGFQWR 256 >gi|13022108|gb|AAK11643.1| thymidylate synthetase [Babesia bovis] Length = 109 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 22/109 (20%) Query: 94 YGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV---------- 135 YG QWR + DY G IDQ++ I+ ++ +P R IV +WNV Sbjct: 1 YGFQWRHFGAEYLDMHADYTGKGIDQLAEIINRIKTNPNDRMLIVCSWNVSGGFLFSPFF 60 Query: 136 ----ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A + KMALPPCHC FQFYV + KLSC ++QRS D+ LG+PFNIAS Sbjct: 61 TIMFADLKKMALPPCHCFFQFYVSDNKLSCMMHQRSCDLGLGVPFNIAS 109 >gi|82592529|sp|P0C0M4|TYSY_STAEP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|886709|emb|CAA88268.1| thymidylate synthase [Staphylococcus epidermidis] Length = 97 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 1/98 (1%) Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S D+FLG+PFNIASY+LLT ++A G + GEFIHT GD H+Y+NH + QLSR Sbjct: 1 SADIFLGVPFNIASYALLTHLVAKECGLEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYL 60 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+ IN + + YED L +YE H AI A ++V Sbjct: 61 PPQLKINTD-KSIFDINYEDLELINYESHPAIKAPIAV 97 >gi|2160270|dbj|BAA03157.1| thymidylate synthase [Methylobacillus glycogenes] Length = 64 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 44/64 (68%), Positives = 53/64 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G + DRTG GT S FGYQMRFDL++GFPLLTTKKVH KS++HELL Sbjct: 1 MKVYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAEGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLR 64 WFL+ Sbjct: 61 WFLQ 64 >gi|998793|gb|AAB34157.1| thymidylate synthase [Pneumocystis carinii] Length = 99 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 14/99 (14%) Query: 93 IYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144 IYG QWR + +Y G +DQ+++I+Q +R PY RR I+SAWN A ++KMALP Sbjct: 1 IYGFQWRHFGAEYIDCKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALP 60 Query: 145 PCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFN 177 PCH QFYV +LSCQLYQRS D+ LG+PFN Sbjct: 61 PCHMFCQFYVHIPSNNHRPELSCQLYQRSCDMGLGVPFN 99 >gi|254490265|ref|ZP_05103454.1| thymidylate synthase [Methylophaga thiooxidans DMS010] gi|224464398|gb|EEF80658.1| thymidylate synthase [Methylophaga thiooxydans DMS010] Length = 194 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 14/190 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I+ G RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MRQYLDLCQRIIEHGEWVENTRTGKRCLTVINADLEYDVAANQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 +L +LRG N + G WD A+ + GE +G +YGVQ R W DG Sbjct: 61 MLGYLRGYDNAADFRAIGCKTWDANANANQDWLNNPHRKGEDDMGRVYGVQGRRWQKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ I L R I++ +N D L PC F V L YQR Sbjct: 121 TPLDQLQKIADHLAQGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSVLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPF 176 S DV LG+ F Sbjct: 181 SCDVPLGLNF 190 >gi|115299498|gb|ABI93719.1| dihydrofolate reductase-thymidylate synthase [Paramecium primaurelia] Length = 93 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 8/93 (8%) Query: 92 PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 PPCH + QF+V NGKLSC +YQ S D LGIPF Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQSSCDFGLGIPF 93 >gi|115299494|gb|ABI93717.1| dihydrofolate reductase-thymidylate synthase [Paramecium primaurelia] Length = 93 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 8/93 (8%) Query: 92 PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + +Y +DQ+ I+Q L+ +P SRR I+SAWN + + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDCQSEYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 PPCH + Q +V NGKLSC +YQRS D LGIPF Sbjct: 61 PPCHVMSQSFVANGKLSCMMYQRSCDFGLGIPF 93 >gi|213026353|ref|ZP_03340800.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 91 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 43/91 (47%), Positives = 59/91 (64%) Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 +PFNIASY+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I Sbjct: 1 MPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 60 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +R++DF + Y+PH I A V++ Sbjct: 61 RKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 91 >gi|332523709|ref|ZP_08399961.1| thymidylate synthase [Streptococcus porcinus str. Jelinkova 176] gi|332314973|gb|EGJ27958.1| thymidylate synthase [Streptococcus porcinus str. Jelinkova 176] Length = 279 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 23/249 (9%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G ++L++ FP+ T + + KS + ELLW + SN + ++ Sbjct: 30 KDGQTANSKYLTGVFTEYNLAEDDFPITTLRPIPIKSAIKELLWIYQDQSNSLDVLEEKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W++W E+G + R G V+ D ++ I++ L +P++RR+++S Sbjct: 90 NVHYWNDW-----EVGNTRTIGQRY-----GAVVKKHDIMTKILKQLADNPWNRRNVISL 139 Query: 133 WNV-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ A + L PC +F +G L L QRS D+ + N Y L MM Sbjct: 140 WDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLVQRSNDMLVAHHINAMQYVALQMM 199 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245 +A ++ G+F + + ++H+Y+N F QA+ LSR P++++N P+ D E Sbjct: 200 IAKHFSWKIGKFFYFVNNLHIYDNQFSQAEELLSREASNCKPRLVLNVPDGTDFFDICAE 259 Query: 246 DFTLRSYEP 254 DF L Y P Sbjct: 260 DFELVDYNP 268 >gi|56755327|gb|AAW25843.1| unknown [Schistosoma japonicum] Length = 111 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 43/93 (46%), Positives = 65/93 (69%) Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LGIPFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E Q+ R+PR P++ Sbjct: 19 LGIPFNIASYALLTYMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKRTPRPFPKLE 78 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I + ++ F++EDF L Y+P+ + K+++ Sbjct: 79 IVREVENIDDFKFEDFKLIDYKPYPKLSMKMAL 111 >gi|313890613|ref|ZP_07824241.1| thymidylate synthase [Streptococcus pseudoporcinus SPIN 20026] gi|313121130|gb|EFR44241.1| thymidylate synthase [Streptococcus pseudoporcinus SPIN 20026] Length = 279 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 23/249 (9%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75 +D ++ G ++L++G FP+ T + + KS + ELLW + SN + ++ Sbjct: 30 KDGQTANSKYLTGVFAEYNLAEGDFPITTLRPIPIKSAIKELLWIYQDQSNSLDVLEEKY 89 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132 V W +W E+G + R G V+ D ++ I++ L +P++RR+++S Sbjct: 90 NVHYWKDW-----EVGNTRTIGQRY-----GAVVKKHDIMTKILKQLADNPWNRRNVISL 139 Query: 133 WNV-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W+ A + L PC +F +G L L QRS D+ + N Y L MM Sbjct: 140 WDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLVQRSNDMLVAHHINAMQYVALQMM 199 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR-SPRTLPQMIIN-PNIVDLLSFRYE 245 +A ++ G+F + + ++H+Y+N F QA+ L+R + P +++N P+ + E Sbjct: 200 IAKHFSWKVGKFFYFVNNLHIYDNQFSQAEELLNREASHCQPHLVLNVPDGTNFFDIGVE 259 Query: 246 DFTLRSYEP 254 DF L Y+P Sbjct: 260 DFELVDYDP 268 >gi|91785563|ref|YP_560769.1| thymidylate synthase [Burkholderia xenovorans LB400] gi|91689517|gb|ABE32717.1| thymidylate synthase [Burkholderia xenovorans LB400] Length = 354 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 111/219 (50%), Gaps = 15/219 (6%) Query: 6 DLLRHVI-----KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 DLLR V K GSD + T G + + + KK S + E L Sbjct: 10 DLLRKVYGRLLRKRGSDDINPTKGPATEINGALLVLKKPRARLSQSEKKNTLFSCLGEFL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W+L G + ++ + +S + +++D + YG R + G DQ+ +++Q+LR Sbjct: 70 WYLAGSDKLDFIQYY-ISRYKDFSDDGKTVFGAYGP--RLFGPTSG--TDQVQNVIQTLR 124 Query: 121 ADPYSRRHIVSAWN-----VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 A+ +SRR ++ ++ L+ + PC C QF++ N +L+ + RS D F+G+P Sbjct: 125 ANQHSRRAVIQLFHGDDLAANLVKRREDLPCTCTLQFFIRNYQLNAMVTMRSNDAFMGLP 184 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 +I ++++L ++A +G + G++ H +G +HLY N+ + Sbjct: 185 HDIFAFTMLQELIARSLGVEVGQYKHAVGSLHLYANNTQ 223 >gi|169836331|ref|ZP_02869519.1| thymidylate synthase [candidate division TM7 single-cell isolate TM7a] Length = 78 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 44/77 (57%), Positives = 51/77 (66%) Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 IV AWN LPPCH F F V KL+C L QRSGD+ LGIPFN+A YSLLTMM+ Sbjct: 2 IVLAWNPGNATISKLPPCHYTFAFNVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMI 61 Query: 189 ASVIGFQYGEFIHTLGD 205 A G++ GEF HT+ D Sbjct: 62 AKECGYEAGEFAHTIID 78 >gi|167837403|ref|ZP_02464286.1| thymidylate synthase [Burkholderia thailandensis MSMB43] Length = 124 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 12/116 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGAWKSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY 104 FLR + + G +WD A+++ + LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGY 116 >gi|322511194|gb|ADX06507.1| putative bifunctional dihydrofolate reductase-thymidylate synthase [Organic Lake phycodnavirus 2] Length = 115 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 QF+V KLSC LYQRSGD+ LG+PFNI SYS LT ++A + EFI+ +G+ H+Y+ Sbjct: 2 QFHVVENKLSCSLYQRSGDLGLGVPFNILSYSALTHLIAHHCHLEASEFIYHIGNAHVYD 61 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 +H + +Q+ + P ++ IN + ++ + DF + +Y+ H ++ K+ Sbjct: 62 DHLDALLVQVEKEPYEFSKVTINNHYDNISDYGINDFDITNYKSHDSVSLKM 113 >gi|222873482|gb|EEF10613.1| predicted protein [Populus trichocarpa] Length = 57 Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 37/57 (64%), Positives = 49/57 (85%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDL++GFP++TTKK+H KS++H Sbjct: 1 MKQYLDFMRHVYEHGTEKSDRTGTGTRSVFGYQMRFDLNEGFPVVTTKKLHLKSIIH 57 >gi|12055931|emb|CAC20646.1| putative thymidylate synthase [Lactobacillus sakei] Length = 70 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 41/64 (64%), Positives = 49/64 (76%) Query: 21 RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIW 80 RT GT S FGYQMRF+L +GFPLLTTKK+ + + ELLWFL+GDSN+ YL +H IW Sbjct: 1 RTNTGTYSLFGYQMRFNLQEGFPLLTTKKMPFGLIKSELLWFLKGDSNIRYLLQHNNHIW 60 Query: 81 DEWA 84 DEWA Sbjct: 61 DEWA 64 >gi|325661465|ref|ZP_08150091.1| hypothetical protein HMPREF0490_00825 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472414|gb|EGC75626.1| hypothetical protein HMPREF0490_00825 [Lachnospiraceae bacterium 4_1_37FAA] Length = 295 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 34/245 (13%) Query: 36 FDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKD--GEL 90 +DLSKG FP+ T + + WKS + E+ W + SN + +++ + W++W KD + Sbjct: 48 YDLSKGEFPINTLRPIPWKSAIKEIFWIYQEASNNLEILNNKYNIKYWNDWQSKDVPNTI 107 Query: 91 GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA-LIDKMALPPCHCL 149 G YG + + D + ++++S+ DP+ R I++ W L + L PC L Sbjct: 108 GQRYGATVKRY--------DLVKNLIKSINEDPFGRHKIMNLWQEKDLQETDGLLPCAFL 159 Query: 150 FQFYVD---NGK--LSCQLYQRSGDVFL---GIPFNIASYSLLTMMLASVIGFQYGEFIH 201 + V GK L L QRSGD+ G N Y+ L MM+A G F+H Sbjct: 160 TMWSVRKNLEGKNFLDMTLIQRSGDMLAASGGGGVNEVQYAALLMMIARHCDLLPGVFVH 219 Query: 202 TLGDVHLYNNHFEQADLQLSR------------SPRTLPQMIINPNIVDLLSFRYEDFTL 249 + + +Y+ H +QA R +P +++ D S +DF + Sbjct: 220 FVQNEQIYDRHIDQAGEMRRRYINMTMDEFYHEYEHKVPMLVLKDEAKDFYSMTIDDFEM 279 Query: 250 RSYEP 254 YEP Sbjct: 280 IDYEP 284 >gi|90580569|ref|ZP_01236374.1| thymidylate synthase [Vibrio angustum S14] gi|90438227|gb|EAS63413.1| thymidylate synthase [Photobacterium angustum S14] Length = 187 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 14/186 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G +RTG + + +D++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLALCQRIVDDGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+ + GE +G +YGVQ R W DG Sbjct: 61 LLGYLRGYDNAAQFRAIGCNTWNANANDNQAWLNNPHRKGEDDMGRVYGVQGRRWQKSDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N D L PC F + L YQR Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFL 172 S DV L Sbjct: 181 SCDVPL 186 >gi|115299500|gb|ABI93720.1| dihydrofolate reductase-thymidylate synthase [Paramecium primaurelia] Length = 93 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 8/93 (8%) Query: 92 PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY DQ+ I+QSL+ +P SRR I+SA N +M+L Sbjct: 1 PVYGFQWRHFGAKYKDCQTDYSNQGADQVKGIIQSLKNNPDSRRIILSARNPIDFKQMSL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 PPCH + QF+V NGKL YQRS D LGIPF Sbjct: 61 PPCHVMSQFFVANGKLIRMTYQRSCDFGLGIPF 93 >gi|414442|gb|AAC43192.1| Homologous to Swiss-Prot Accession Number P13954, thymidylate synthetase [Mycoplasma genitalium] Length = 95 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%) Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+FLG+PFNIASY+LL ++A + G FIHTLGD H+Y NH EQ LQL+R+ P Sbjct: 1 DIFLGVPFNIASYALLVYLVAHETKLKPGYFIHTLGDAHIYENHIEQIKLQLTRTTLDPP 60 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+++ + + ++ ++D L Y H I +V+V Sbjct: 61 QVVLKSD-KSIFAYSFDDIELVGYNYHPFIYGRVAV 95 >gi|240276635|gb|EER40146.1| thymidylate synthase [Ajellomyces capsulatus H143] Length = 209 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 27/121 (22%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46 HQYL L+R +++ G R DRTG GTRS F Q+RF LSK PLLT Sbjct: 47 HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+Y Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166 Query: 95 G 95 G Sbjct: 167 G 167 >gi|83747574|ref|ZP_00944611.1| Deoxyuridylate hydroxymethyltransferase [Ralstonia solanacearum UW551] gi|83725754|gb|EAP72895.1| Deoxyuridylate hydroxymethyltransferase [Ralstonia solanacearum UW551] Length = 352 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 97/178 (54%), Gaps = 15/178 (8%) Query: 46 TTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD 105 T ++ S + E LW+L G + +S++ + +S +DE++D + YG + ++ Sbjct: 53 TEQRSTLFSCLGEFLWYLAGSNELSFIQYY-ISRYDEFSDDGNTVHGAYGPRL-----FN 106 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWN-------VALIDKMALPPCHCLFQFYVDNGK 158 ++Q+S++++ L + +RR ++ +N VA+ K PC C QF + + Sbjct: 107 MRGVNQVSNVIEKLSGNNDTRRAVIQLFNAEDLGCDVAVGRKDI--PCTCTMQFSLRARQ 164 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 L + RS D +LG+P +I ++++L ++A +G + G + H +G +HLY+ + +QA Sbjct: 165 LHMFVTMRSNDAYLGLPHDIFAFTMLQEIVARAVGAELGTYKHAVGSLHLYSKNTDQA 222 >gi|182678521|ref|YP_001832667.1| thymidylate synthase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634404|gb|ACB95178.1| thymidylate synthase [Beijerinckia indica subsp. indica ATCC 9039] Length = 342 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 11/202 (5%) Query: 21 RTGVGTRST----FGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHG 76 RT G+R G +R + + + S + ELLW+L G ++++ + Sbjct: 24 RTNAGSRGNTVELLGVALRILKPRARISRSENRGKPFSAIGELLWYLSGLDTLAFIEPYV 83 Query: 77 VSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA 136 + D+ G + YG + R+ D IDQ +SI LR P SRR ++ +N Sbjct: 84 SAYRDDAVA--GVIQGAYGPRLRAMRD----GIDQFASIETLLRQKPNSRRAVIQLFNAE 137 Query: 137 -LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 + + PC QF++ +G L + RS D + G+P ++ ++++ M+A +G + Sbjct: 138 DIATEHKEIPCTTTLQFHLRDGLLHMSVTMRSNDAYWGLPHDVFCFTMIQEMMARRLGVE 197 Query: 196 YGEFIHTLGDVHLYNNHFEQAD 217 GE+ H +G +H+Y H D Sbjct: 198 LGEYYHYVGSMHVYEKHLNHLD 219 >gi|152002544|dbj|BAF73568.1| thymidylate synthase [Onion yellows phytoplasma OY-W] Length = 79 Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 35/79 (44%), Positives = 53/79 (67%) Query: 186 MMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYE 245 MM+A V Q EFIHTLGD H+Y+NH Q Q+ R+P+ LPQMI+NP+I ++ F++ Sbjct: 1 MMVAQVTNLQSYEFIHTLGDAHIYSNHLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFI 60 Query: 246 DFTLRSYEPHAAILAKVSV 264 FTL++Y+ + ++V Sbjct: 61 YFTLQNYQCDGILKGDIAV 79 >gi|302556579|ref|ZP_07308921.1| thymidylate synthase [Streptomyces griseoflavus Tu4000] gi|302474197|gb|EFL37290.1| thymidylate synthase [Streptomyces griseoflavus Tu4000] Length = 316 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 100/184 (54%), Gaps = 15/184 (8%) Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 V E +W L G S+ ++ + + ++AD+ LG YG + R+W +DQ++ Sbjct: 64 AVAETVWHLSG-SDAPWIFDYNNRL-RQFADEGVLLG-AYGPRMRNW----AGKVDQLAR 116 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALP--PCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 +++ L+ADP SRR ++ ++ A D PC F+F++ G+L R DV++ Sbjct: 117 VIEILQADPDSRRALIQLYDPAQ-DAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWI 175 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G+P+++ Y++L ++A + + GEF +G +H+Y+ H EQAD+ S LP I Sbjct: 176 GMPYDVFFYTVLHELVAGWLDAELGEFHLHIGSLHIYDEHIEQADMLTS-----LPASEI 230 Query: 233 NPNI 236 P++ Sbjct: 231 MPDL 234 >gi|90420526|ref|ZP_01228433.1| possible thymidylate synthase [Aurantimonas manganoxydans SI85-9A1] gi|90335254|gb|EAS49007.1| possible thymidylate synthase [Aurantimonas manganoxydans SI85-9A1] Length = 338 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 10/216 (4%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 +HQ Y D+ +H + G R GT G +R + + + S + EL Sbjct: 12 LHQLYQDIDKHGRQHGGGTRGNKLGGTVELLGVALRITNPRARISRSENRGKPFSALGEL 71 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 LW+L G + ++++ + VS ++ A DG L YG ++ + IDQ SI + L Sbjct: 72 LWYLSGSNKLTFIKPY-VSEYENDA-VDGVLEGAYGPRFLAM----RGEIDQFDSIERLL 125 Query: 120 RADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 R P SRR +V +N I D +P C QF++ G+L + RS D + G+P + Sbjct: 126 RRKPGSRRAVVQLFNAEDIATDHKEIP-CTTTLQFHLREGRLHLSVTLRSNDAYWGLPHD 184 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 + ++++ M+A + + GE+ +G +H+Y+ + Sbjct: 185 VFCFTMIQEMMARRLEAELGEYYQYVGSMHVYDKYL 220 >gi|167645964|ref|YP_001683627.1| thymidylate synthase [Caulobacter sp. K31] gi|167348394|gb|ABZ71129.1| thymidylate synthase [Caulobacter sp. K31] Length = 367 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 11/186 (5%) Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV 108 K H S + E +W++ + + + + +S + ++A+KDG + YG P G Sbjct: 56 KGHVFSCIGEFIWYISCSNRLEPVEYY-ISRYKKFAEKDGTVWGAYG------PRIFGGD 108 Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 Q + + L P +R+ ++ ++ ++ PC C QF V +G L+ ++ RS Sbjct: 109 RSQYEVVKEMLSERPSTRKAVIQLFDREDVLQDYNDIPCTCTMQFLVRDGMLNLVVHMRS 168 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS---P 224 DV++G+P +I +++++ +LA +GF+ G + H +G HLY++ E+ + L Sbjct: 169 NDVYMGLPHDIFAFTMIQEILAHDLGFKLGTYKHMVGSFHLYDHDREKVEQYLKEGFQPT 228 Query: 225 RTLPQM 230 R +P M Sbjct: 229 REMPAM 234 >gi|307325213|ref|ZP_07604416.1| thymidylate synthase [Streptomyces violaceusniger Tu 4113] gi|306889017|gb|EFN20000.1| thymidylate synthase [Streptomyces violaceusniger Tu 4113] Length = 316 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 18/195 (9%) Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG 106 T+ V+ V E +W L G S+ S++ + + ++AD DG L YG + R+W Sbjct: 56 TRIVNPAFAVAETVWHLSG-SDASWIFDYNERL-RQYAD-DGVLLGAYGPRMRNW----A 108 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP--PCHCLFQFYVDNGKLSCQLY 164 +DQ++ +V+ L+ DP SRR ++ ++ A D PC F+F++ +L Sbjct: 109 GKVDQLARVVEILKEDPDSRRALIQLYDPAQ-DAAGHKDVPCTLGFRFHLRADRLHMATM 167 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 R DV++G+P+++ Y++L ++A + + GEF +G +H+Y+ H EQA+L Sbjct: 168 MRGQDVWIGMPYDVFFYTVLHELVAGWLDAELGEFHLHVGSLHIYDEHVEQAEL------ 221 Query: 225 RTLPQMIINPNIVDL 239 L + +P++ DL Sbjct: 222 --LTSLAASPHMPDL 234 >gi|311278400|ref|YP_003940631.1| thymidylate synthase [Enterobacter cloacae SCF1] gi|308747595|gb|ADO47347.1| thymidylate synthase [Enterobacter cloacae SCF1] Length = 593 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 9/164 (5%) Query: 54 SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 S + ELLW++ G ++ ++ R+ + ++ ++D + + YG P GN +Q Sbjct: 61 SALGELLWYMSGLHDLEFI-RYYIPKYNCFSDDNKTIYGGYG------PRIFGND-NQFM 112 Query: 114 SIVQSLRADPYSRRHIVSAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 ++Q LR SR+ I+ ++ L +K PC C QF + N KLS + RS DVFL Sbjct: 113 RVIQLLREKKDSRQAIIQIFHSDDLKEKHKDIPCTCTLQFILRNNKLSLIVNMRSNDVFL 172 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 G P ++ +++++ AS++G G++ H +G +HLY+ H +A Sbjct: 173 GFPHDVFAFTMIQEYAASILGCDLGDYKHFVGSLHLYDEHRIKA 216 >gi|145244279|gb|ABP49090.1| putative thymidylate synthase [Streptomyces lividans] Length = 308 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 10/171 (5%) Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 V E +W L G S+ ++ + + ++AD DG L YG + R+W G +DQ++ Sbjct: 56 AVAETVWHLSG-SDAPWIFDYNYRL-RQFAD-DGVLLGAYGPRMRNW----GGKVDQLAR 108 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALP--PCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 +V+ L+AD SRR ++ ++ A D PC F+F++ G+L R DV++ Sbjct: 109 VVEILQADSDSRRALIQLYDPAQ-DAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWI 167 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 G+P+++ Y++L ++A + + GEF +G +H+Y+ H EQAD S S Sbjct: 168 GMPYDVFFYTVLHELVAGWLDAELGEFHLHIGSLHIYDEHIEQADALTSLS 218 >gi|256784563|ref|ZP_05522994.1| thymidylate synthase [Streptomyces lividans TK24] gi|289768447|ref|ZP_06527825.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289698646|gb|EFD66075.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 316 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 10/171 (5%) Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 V E +W L G S+ ++ + + ++AD DG L YG + R+W G +DQ++ Sbjct: 64 AVAETVWHLSG-SDAPWIFDYNNRL-RQFAD-DGVLLGAYGPRMRNW----GGKVDQLAR 116 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALP--PCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 +V+ L+AD SRR ++ ++ A D PC F+F++ G+L R DV++ Sbjct: 117 VVEILQADSDSRRALIQLYDPAQ-DAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWI 175 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 G+P+++ Y++L ++A + + GEF +G +H+Y+ H EQAD S S Sbjct: 176 GMPYDVFFYTVLHELVAGWLDAELGEFHLHIGSLHIYDEHIEQADALTSLS 226 >gi|170694064|ref|ZP_02885220.1| thymidylate synthase [Burkholderia graminis C4D1M] gi|170141136|gb|EDT09308.1| thymidylate synthase [Burkholderia graminis C4D1M] Length = 353 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 85/166 (51%), Gaps = 10/166 (6%) Query: 54 SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 S + E LW+L G + + ++ + + + E++D + + YG + +Q+ Sbjct: 63 SCLGEFLWYLSGSNKLDFIQYY-IKSYSEFSDDNETIFGAYGPRLFG----SDKAPNQVQ 117 Query: 114 SIVQSLRADPYSRRHIVSAWNVA-----LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +++++LRA SRR + ++ L + PC C QF V + +L + RS Sbjct: 118 NVIETLRASSTSRRAAIQLYHGEDLAQNLEKRRKDLPCTCTLQFTVRDHQLHAMVMMRSN 177 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 D F+G+P +I ++++L ++A +G + G++ H +G +HLY + Sbjct: 178 DAFMGLPHDIFAFTMLQELIARSLGVEVGQYKHAVGSLHLYATDIQ 223 >gi|157368568|ref|YP_001476557.1| thymidylate synthase [Serratia proteamaculans 568] gi|157320332|gb|ABV39429.1| thymidylate synthase [Serratia proteamaculans 568] Length = 325 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 13/194 (6%) Query: 54 SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 S + ELLW+L +++ ++ RH + + ++A+ DG + YG + S + +Q+ Sbjct: 63 SCLGELLWYLSAQNDLDFI-RHFIPRYVKYAESDGRIHGGYGPRLFSM----HGLYNQLE 117 Query: 114 SIVQSLRADPYSRRHIVSAWNVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +++ L+ +RR ++ ++ + + + A PC QF V L + R Sbjct: 118 NVISLLQEKRTTRRALIQLFDASDLVTDNPEQTEYADIPCTISLQFIVRQDALHLFVCMR 177 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225 S D F+G+P ++ ++++L ++A + G + G + H + +H+Y HFEQ LQ Sbjct: 178 SNDAFMGLPHDVFAFTMLQELVARLTGCKLGHYHHFVSSLHIYEEHFEQVKALQQEGFMS 237 Query: 226 TLPQMIINPNIVDL 239 TLP M P I L Sbjct: 238 TLPVMGDMPEIQSL 251 >gi|291092708|gb|ADD74391.1| thymidylate synthase [uncultured virus] Length = 96 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%) Query: 10 HVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN 68 V+K G R DRTG GTR+ FG + FDL PLL +++ +KS++ ELLWFLRG+++ Sbjct: 1 KVLKRGEQRDDRTGTGTRALFGELLEFDLRGNRLPLLNCRRLSFKSILEELLWFLRGETD 60 Query: 69 VSYLHRHGVSIWDEWADKD 87 L R GV IW E A +D Sbjct: 61 SKILERRGVHIWTEHATRD 79 >gi|474095|emb|CAA83575.1| thymidylate synthase [Mycoplasma pneumoniae] Length = 50 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 33/41 (80%), Positives = 38/41 (92%) Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D+M LPPCH L+QFYV +G+LSCQLYQRSGD+FLGIPFNIA Sbjct: 1 DQMLLPPCHSLYQFYVQDGQLSCQLYQRSGDIFLGIPFNIA 41 >gi|310722252|ref|YP_003969076.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4] gi|306021095|gb|ADM79630.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4] Length = 105 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 4/103 (3%) Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DV LG+PFNIASY+LL ++A + + GE + + DVH+Y NH LSR Sbjct: 4 QRSVDVGLGLPFNIASYALLVHIVARICNLEVGELVFSGADVHIYENHLSHLGGMLSREE 63 Query: 225 RTLPQMIINPNI---VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R LP + P+I DL DF L Y+PH I ++V Sbjct: 64 RPLPTLSF-PDIDSLSDLRLLEAADFRLDGYDPHPTIKLPMAV 105 >gi|206973310|ref|ZP_03234232.1| thymidylate synthase [Bacillus cereus AH1134] gi|206732194|gb|EDZ49394.1| thymidylate synthase [Bacillus cereus AH1134] Length = 326 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 24/223 (10%) Query: 43 PLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP 102 P+L + ++ + E W + G + ++ L+ ++ +D ++D L YG + R Sbjct: 54 PILQERALNPFFALTEFSWIITGSNRLTPLNNF-INDFDRFSDDGFTLNGAYGHRLRELH 112 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP-PCHCLFQFYVDNGKLSC 161 +DQ+ ++ L+ + +RR +++ W++ + + PC+ + N L Sbjct: 113 G-----LDQLEKSIRILQEEKSTRRVVLTMWHIDDLGSNSRDIPCNISIMLKIRNNLLDM 167 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 + RS D+FLG+P+N+ + LL +A IG + G H +HLY+ HFE+ Sbjct: 168 TVINRSNDLFLGVPYNVVVFYLLQCYIAKKIGCKVGVQRHFTDSLHLYSQHFEKV----- 222 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFT---LRSY--EPHAAIL 259 Q II N ++ + + YE F L +Y E H IL Sbjct: 223 -------QSIIQNNNLERIKYMYEKFEKIDLSTYIDENHRYIL 258 >gi|331028071|ref|YP_004421785.1| thymidylate synthase [Roseobacter phage RDJL Phi 1] gi|301341534|gb|ADK73418.1| thymidylate synthase [Roseobacter phage RDJL Phi 1] Length = 295 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 17/227 (7%) Query: 4 YLDLLRHVIKFG---SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 Y LL ++ G ++ R RT + G+ + DL+ G P+ ++ + E Sbjct: 10 YRCLLGELMNHGVTETNERTRTQIKMLQG-GHSFKLDLTSGRLPIAGNRRYYPHVAAAET 68 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 W G + +++ +W ++ + DGEL YG +WR + DQI V+ L Sbjct: 69 AWQFMGTKDPAFIVSKAPKLWSKFVE-DGELKTAYGHRWR-----EAFGRDQIKLAVKEL 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALP-----PCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 +P +R+ +SAW+ + D + P PC F L ++ RS D F+G+ Sbjct: 123 MDNPTNRQLFISAWDPS-CDGLGGPQPKNIPCPVGFTVSRFRDDLHMSVFIRSSDAFVGL 181 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 P+++ Y+L + + G + TL HLY H+ + L+ Sbjct: 182 PYDVMCYALTADAIGAEAGLRPASLHVTLAHPHLYEPHWLATEACLT 228 >gi|238025095|ref|YP_002909327.1| Thymidylate synthase protein [Burkholderia glumae BGR1] gi|237879760|gb|ACR32092.1| Thymidylate synthase protein [Burkholderia glumae BGR1] Length = 329 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 8/237 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R + + F ++K + E LW+ Sbjct: 12 YLATLRDVCTAYEYRNAPRGQAEREIIGYSARIEDPRARFCRHASRKQNVVFNYAEALWY 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G ++++++ + S+ D G YG + + D DG IDQI + L R Sbjct: 72 LSGRNDLAFIEYYAPSMARYSPDGKTLPGTGYGARLLHFGD-DG--IDQIERAIDILKRD 128 Query: 122 DPYSRRHIVSAWNVA--LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ L + C Q + +G+L+ + R+ D ++G+ ++ Sbjct: 129 DAESKRVVLQIFDAREDLYKRNIDVSCTLGLQLLLRDGRLNMVAFMRANDAYVGLLNDVF 188 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 S++ L LAS IG + G + H +G VH+Y+ + QA+ L P T + P + Sbjct: 189 SFTFLQEYLASAIGCELGTYTHHVGSVHIYDQNLLQAEALLG-PPGTAVTAVAPPRM 244 >gi|115377305|ref|ZP_01464513.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] gi|115365683|gb|EAU64710.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] Length = 333 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 10/212 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH---ELL 60 YL LR + + R G +R G+ F+L+ ++ +++ E L Sbjct: 11 YLHGLRWIYESPQFRVAPRGFASRENLGFC--FELTDPLARVSCAPERKTNIIFNFAEAL 68 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W+L G +++ + + SI D G YG + + G I+Q + V L+ Sbjct: 69 WYLSGQADLEQISYYAPSIRKYSMDGRTLTGTAYGAKLFR---FGGAAINQWNRAVDLLK 125 Query: 121 ADPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 DP ++R ++ ++ LI C QF+V G+L Y R+ D F G+ +I Sbjct: 126 EDPNTKRAVLQIFDAHELLIQDNIDVSCTLGLQFFVREGRLYAAAYMRANDAFRGVVSDI 185 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 S++ L M+A +G + G + H +G H+Y Sbjct: 186 FSFTFLQEMMARQLGLKVGSYFHYVGSFHIYE 217 >gi|310823030|ref|YP_003955388.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] gi|309396102|gb|ADO73561.1| Thymidylate synthase [Stigmatella aurantiaca DW4/3-1] Length = 336 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 10/212 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH---ELL 60 YL LR + + R G +R G+ F+L+ ++ +++ E L Sbjct: 14 YLHGLRWIYESPQFRVAPRGFASRENLGFC--FELTDPLARVSCAPERKTNIIFNFAEAL 71 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W+L G +++ + + SI D G YG + + G I+Q + V L+ Sbjct: 72 WYLSGQADLEQISYYAPSIRKYSMDGRTLTGTAYGAKLFR---FGGAAINQWNRAVDLLK 128 Query: 121 ADPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 DP ++R ++ ++ LI C QF+V G+L Y R+ D F G+ +I Sbjct: 129 EDPNTKRAVLQIFDAHELLIQDNIDVSCTLGLQFFVREGRLYAAAYMRANDAFRGVVSDI 188 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 S++ L M+A +G + G + H +G H+Y Sbjct: 189 FSFTFLQEMMARQLGLKVGSYFHYVGSFHIYE 220 >gi|207742054|ref|YP_002258446.1| thymidylate synthase protein [Ralstonia solanacearum IPO1609] gi|206593440|emb|CAQ60367.1| putative thymidylate synthase protein [Ralstonia solanacearum IPO1609] Length = 283 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 88/161 (54%), Gaps = 15/161 (9%) Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 + G + +S++ + +S +DE++D + YG + ++ ++Q+S++++ L + Sbjct: 1 MAGSNELSFIQYY-ISRYDEFSDDGNTVHGAYGPRL-----FNMRGVNQVSNVIEKLSGN 54 Query: 123 PYSRRHIVSAWN-------VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 +RR ++ +N VA+ K PC C QF + +L + RS D +LG+P Sbjct: 55 NDTRRAVIQLFNAEDLGCDVAVGRKDI--PCTCTMQFSLRARQLHMFVTMRSNDAYLGLP 112 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 +I ++++L ++A +G + G + H +G +HLY+ + +QA Sbjct: 113 HDIFAFTMLQEIVARAVGAELGTYKHAVGSLHLYSKNTDQA 153 >gi|21700319|gb|AAM75819.1|AF485373_1 thymidylate synthase [Mastigamoeba balamuthi] Length = 65 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 8/65 (12%) Query: 91 GPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 GP+YG QWR + DY G IDQ+ ++++ +R DP SRR I+SAWN ++KMA Sbjct: 1 GPVYGFQWRHFGAEYTNMNADYAGKGIDQLKNVIEMIRHDPSSRRIIMSAWNPLDLEKMA 60 Query: 143 LPPCH 147 LPPCH Sbjct: 61 LPPCH 65 >gi|7670721|gb|AAF66223.1| thymidylate synthase [Felis catus] Length = 45 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/45 (73%), Positives = 39/45 (86%) Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 LSCQLYQRSGD+ LG+PFNIASYSLLT M+A + G + G+FIHTL Sbjct: 1 LSCQLYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFIHTL 45 >gi|260575990|ref|ZP_05843984.1| thymidylate synthase [Rhodobacter sp. SW2] gi|259021689|gb|EEW24991.1| thymidylate synthase [Rhodobacter sp. SW2] Length = 358 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 16/183 (8%) Query: 35 RFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS----YLHRHGVSIWDEWADKDGEL 90 R LS+ F K S + EL W+L G V Y+ + I DE +G Sbjct: 50 RARLSRSF-----SKAKAFSPLGELFWYLSGSDRVEFIKHYIPNYPKLIKDE-VTANGAY 103 Query: 91 GP-IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW-NVALIDKMALPPCHC 148 GP I+G + + DG + ++++LR SR +V + N K PC C Sbjct: 104 GPRIFGKE--ALAKRDG--ASEWDRVIRTLREREGSRNALVQIYDNSDAKPKNGDKPCTC 159 Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 QF + NG+L + RS D F G+P ++ ++++L + A +G G + H++ +HL Sbjct: 160 TIQFAIRNGQLLMHTHMRSNDAFFGLPHDVFTFTMLQEIAARELGLGLGRYSHSVTSLHL 219 Query: 209 YNN 211 Y++ Sbjct: 220 YHD 222 >gi|297729145|ref|NP_001176936.1| Os12g0446900 [Oryza sativa Japonica Group] gi|255670280|dbj|BAH95664.1| Os12g0446900 [Oryza sativa Japonica Group] Length = 89 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/43 (72%), Positives = 38/43 (88%) Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 +FYV+NG+LSCQ+YQRS D+ LG+PFNIASYSLLT M+A V G Sbjct: 32 KFYVENGELSCQMYQRSADMGLGVPFNIASYSLLTCMIAQVCG 74 >gi|297611836|ref|NP_001067911.2| Os11g0484400 [Oryza sativa Japonica Group] gi|255680095|dbj|BAF28274.2| Os11g0484400 [Oryza sativa Japonica Group] Length = 77 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/44 (72%), Positives = 39/44 (88%) Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 FQFYV++G+LSCQ+YQRS D+ LG+PFNIASYSLLT M+A V G Sbjct: 19 FQFYVESGELSCQMYQRSADMGLGVPFNIASYSLLTYMIAHVCG 62 >gi|312965796|ref|ZP_07780022.1| thymidylate synthase family protein [Escherichia coli 2362-75] gi|331669729|ref|ZP_08370575.1| conserved hypothetical protein [Escherichia coli TA271] gi|312289039|gb|EFR16933.1| thymidylate synthase family protein [Escherichia coli 2362-75] gi|331063397|gb|EGI35310.1| conserved hypothetical protein [Escherichia coli TA271] Length = 326 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 13/191 (6%) Query: 54 SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 S + E LW+L +++ ++ +H + + E A+ DG++ YG + + + +Q+ Sbjct: 63 SCLGEFLWYLSAQNDLEFI-KHFIPRYAESAESDGKIHGGYGPRLFNM----RGLYNQLK 117 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALP-------PCHCLFQFYVDNGKLSCQLYQR 166 +++ L+ +RR ++ ++ + + PC QF V +L + R Sbjct: 118 NVINLLQEKKPTRRAVIQLFDASDLVPSKTEQREYVDIPCTISMQFIVRCEELHLFVCMR 177 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225 S D F+G+P ++ ++++L ++A +IG + G + H + +HLY N E+ LQ Sbjct: 178 SNDAFMGLPHDVFAFTMLQELVARLIGCELGHYHHFVSSLHLYKNDLEKVKALQKEGFMS 237 Query: 226 TLPQMIINPNI 236 TLP M P + Sbjct: 238 TLPVMGSMPEM 248 >gi|194450574|ref|YP_002048341.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|300925828|ref|ZP_07141676.1| thymidylate synthase [Escherichia coli MS 182-1] gi|194408878|gb|ACF69097.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|300418080|gb|EFK01391.1| thymidylate synthase [Escherichia coli MS 182-1] Length = 326 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 13/191 (6%) Query: 54 SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 S + E LW+L +++ ++ +H + + E A+ DG++ YG + + + +Q+ Sbjct: 63 SCLGEFLWYLSAQNDLEFI-KHFIPRYAESAESDGKIHGGYGPRLFNM----RGLYNQLK 117 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALP-------PCHCLFQFYVDNGKLSCQLYQR 166 +++ L+ +RR ++ ++ + + PC QF V +L + R Sbjct: 118 NVINLLQEKKPTRRAVIQLFDASDLVPSKTEQREYVDIPCTISMQFIVRCEELHLFVCMR 177 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225 S D F+G+P ++ ++++L ++A +IG + G + H + +HLY N E+ LQ Sbjct: 178 SNDAFMGLPHDVFAFTMLQELVARLIGCELGHYHHFVSSLHLYKNDLEKVKALQKEGFMS 237 Query: 226 TLPQMIINPNI 236 TLP M P + Sbjct: 238 TLPVMGSMPEM 248 >gi|169634660|ref|YP_001708396.1| putative thymidylate synthase [Acinetobacter baumannii SDF] gi|87299249|emb|CAJ77006.1| Thymidylate synthase [Acinetobacter baumannii] gi|169153452|emb|CAP02595.1| putative Thymidylate synthase [Acinetobacter baumannii] Length = 222 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 27/171 (15%) Query: 54 SVVHELLWFLRGDSNVSYL------HRHGVSIW-DEWADKDGELGP-IYGVQWRSWPDYD 105 S + E W+L G ++ ++ +R + DE G GP I+G Q Sbjct: 61 SCIGEFFWYLNGSDSLEFIEYYISDYRKYIEYQIDENKPALGAYGPRIFGAQ-------- 112 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQL 163 +Q + I++ L+ P SRR ++S ++ L + PC CL QF++ N +L Sbjct: 113 ----NQFNKIIEVLKDKPTSRRAVISIYSKDDLLREDSRDIPCTCLLQFFIRNERLHLTA 168 Query: 164 YQRSGDVFLGIPFNIASYSLL-TMMLASVI----GFQYGEFIHTLGDVHLY 209 RS D +G+ +I S++L+ ++LA +I Q GE+ H +G +H+Y Sbjct: 169 TMRSNDAAIGLVHDIFSFTLIQELLLAKLIRYIPNLQLGEYTHIVGSLHIY 219 >gi|305664003|ref|YP_003860291.1| thymidylate synthase [Ignisphaera aggregans DSM 17230] gi|304378572|gb|ADM28411.1| thymidylate synthase [Ignisphaera aggregans DSM 17230] Length = 241 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 53/107 (49%) Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 DG +++QI IV+ LR PY+RR W + PPC F V +GKL ++ Sbjct: 102 DGRIVNQIEKIVEKLRKTPYTRRAQAITWQPWKDLETEHPPCLQRIWFRVIDGKLVMHIH 161 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 RS D F N+ +++ L +A+ +G + G +IH H+Y Sbjct: 162 MRSNDAFKAAFMNMYAFTELQRFVANELGVEPGRYIHIADSYHVYER 208 >gi|299142236|ref|ZP_07035369.1| thymidylate synthase [Prevotella oris C735] gi|298576325|gb|EFI48198.1| thymidylate synthase [Prevotella oris C735] Length = 212 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y ++L+ +I G + +R G R Q+ + + + K + +EL Sbjct: 1 MNKYHEILKRIIVSGKTQHNRKGC-IRYLLNEQLSLSPVDLLDIFESHGIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD V S+P Y + I+ I + R Sbjct: 60 LFMQGERQVQKYREVGINWWDYCG----------SVLVNSYPTYFEKLPPLIAKINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D+G+L YQRS D LG+P +I Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPADI-- 162 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 Y L M A I LG+VH+Y N+ E+ L L Sbjct: 163 YHLYLM--AQQIDLPLKNITLNLGNVHIYENNLERTRLLL 200 >gi|170755095|ref|YP_001780402.1| thymidylate synthase [Clostridium botulinum B1 str. Okra] gi|169120307|gb|ACA44143.1| thymidylate synthase [Clostridium botulinum B1 str. Okra] Length = 324 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 10/189 (5%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G +++ Y+ + ++ D G YG + S Y+ N I+Q + I++ Sbjct: 65 EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YEYNKINQWNRIIK 121 Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + DP ++R + + N L K C FQF++ KL + R+ D + GI Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIRERKLYMTTFMRANDAYRGII 181 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230 ++ S++ + LA+ + G++ H + H+Y F+ A+ L S + P+M Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241 Query: 231 IINPNIVDL 239 N DL Sbjct: 242 PKKDNWEDL 250 >gi|152002543|dbj|BAF73567.1| thymidylate synthase [Onion yellows phytoplasma OY-W] Length = 58 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 30/43 (69%), Positives = 36/43 (83%) Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 I+++WN L+++MALPPCH L QFYV GKLS QLYQRSGDVF Sbjct: 2 ILNSWNPPLLNQMALPPCHVLIQFYVHQGKLSLQLYQRSGDVF 44 >gi|6644121|gb|AAF20914.1| thymidylate synthase [Equus caballus] Length = 44 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 30/44 (68%), Positives = 38/44 (86%) Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HT Sbjct: 1 LSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHT 44 >gi|148378764|ref|YP_001253305.1| thymidylate synthase [Clostridium botulinum A str. ATCC 3502] gi|153931597|ref|YP_001383152.1| thymidylate synthase [Clostridium botulinum A str. ATCC 19397] gi|153935631|ref|YP_001386700.1| thymidylate synthase [Clostridium botulinum A str. Hall] gi|148288248|emb|CAL82322.1| putative phage-related deoxyuridylate hydroxymethyltransferase [Clostridium botulinum A str. ATCC 3502] gi|152927641|gb|ABS33141.1| thymidylate synthase [Clostridium botulinum A str. ATCC 19397] gi|152931545|gb|ABS37044.1| thymidylate synthase [Clostridium botulinum A str. Hall] Length = 324 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G +++ Y+ + ++ D G YG + S Y N I+Q + I++ Sbjct: 65 EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGYNKINQWNRIIK 121 Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + DP ++R + + N L K C FQF++ KL + R+ D + GI Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230 ++ S++ + LA+ + G++ H + H+Y F+ A+ L S + P+M Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSAKKELSFPRM 241 Query: 231 IINPNIVDL 239 N DL Sbjct: 242 PKKDNWEDL 250 >gi|226948057|ref|YP_002803148.1| thymidylate synthase [Clostridium botulinum A2 str. Kyoto] gi|226843129|gb|ACO85795.1| thymidylate synthase [Clostridium botulinum A2 str. Kyoto] Length = 324 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G +++ Y+ + ++ D G YG + S Y N I+Q + I++ Sbjct: 65 EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGYNKINQWNRIIK 121 Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + DP ++R + + N L K C FQF++ KL + R+ D + GI Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230 ++ S++ + LA+ + G++ H + H+Y F+ A+ L S + P+M Sbjct: 182 SDVFSFTFIQEFLAAELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241 Query: 231 IINPNIVDL 239 N DL Sbjct: 242 PKKDNWEDL 250 >gi|209972965|ref|YP_002300412.1| gp29 [Bacillus phage SPO1] gi|209871285|gb|ACI91041.1| gp29 [Bacillus phage SPO1] Length = 383 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 14/217 (6%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 Y+D+L VIK G R G + + F + + L + ++ V E LW Sbjct: 13 YMDILSTVIKEGDVLAPR-GKRIKEIRPVMIEFKNPIRRTTFLKGRNINPFFQVAESLWI 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGN-----VIDQISSIVQ 117 L G S+V +L + ++ +++D YG + R W D N +DQ+ + + Sbjct: 72 LAGRSDVGFLLDYNKNMG-QFSDDGVFFNAPYGERLRFWNRSDANNFIYNPLDQLRDVYE 130 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALP----PCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ADP +R+ + +N L D + PC+ L F + NGKL +Y RS D+ G Sbjct: 131 KIKADPDTRQAVAVIYN-PLFDNINNDTKDRPCNLLLSFKLRNGKLDLSVYNRSNDLHWG 189 Query: 174 -IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 N+ +S + +A+ +G + G + +H+Y Sbjct: 190 TFGANLCQFSTILEAMATWLGVEVGSYYQITDSLHVY 226 >gi|183980062|ref|YP_001848353.1| thymidylate synthase, ThyA_1 [Mycobacterium marinum M] gi|183173388|gb|ACC38498.1| thymidylate synthase, ThyA_1 [Mycobacterium marinum M] Length = 316 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 9/196 (4%) Query: 22 TGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81 T TR G + + T + ++ + +L W+L G +N + H V Sbjct: 31 TRAPTRELIGVSLELTEPRCRLSRTEARRLSRTGIAQLAWYLSGTTNPEMIL-HWVPNHR 89 Query: 82 EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS---AWNVALI 138 + DG + YG + D Q ++++ L+ SRR ++ A ++ Sbjct: 90 NELEADGTIHGAYGPRMFGTGDNA-----QFCTVLELLKTSSSSRRAVIQLFDATDLTGP 144 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 + PC QF+V + +L + RS D ++G+P ++ ++++L ++A +G G Sbjct: 145 GRYKDVPCTNTLQFFVRDSRLHLMVTMRSNDAYIGLPLDVFAFTMLQELMAGELGIGIGR 204 Query: 199 FIHTLGDVHLYNNHFE 214 +IH++G +H+Y + E Sbjct: 205 YIHSVGSLHIYEYNKE 220 >gi|399407|sp|P31654|DUHM_BPSP1 RecName: Full=Deoxyuridylate hydroxymethyltransferase; Short=Deoxyuridylate hydroxymethylase; AltName: Full=dUMP hydroxymethylase; Short=dUMP-HMase gi|14871|emb|CAA43136.1| 29 [Bacillus phage SPO1] Length = 383 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 14/217 (6%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 Y+D+L VIK G R G + + F + + L + ++ V E LW Sbjct: 13 YMDILSTVIKEGDVLAPR-GKRIKEIRPVMIEFKNPIRRTTFLKGRNINPFFQVAESLWI 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGN-----VIDQISSIVQ 117 L G S+V +L + ++ +++D YG + R W D N +DQ+ + + Sbjct: 72 LAGRSDVGFLLDYNKNMG-QFSDDGVFFNAPYGERLRFWNRSDANNFIYNPLDQLRDVYE 130 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALP----PCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ADP +R+ + +N L D + PC+ L F + NGKL +Y RS D+ G Sbjct: 131 KIKADPDTRQAVAVIYN-PLFDNINNDTKDRPCNLLLSFKLRNGKLDLSVYNRSNDLHWG 189 Query: 174 -IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 N+ +S + +A+ +G + G + +H+Y Sbjct: 190 TFGANLCQFSTILEAMATWLGVEVGSYYQITDSLHVY 226 >gi|7670725|gb|AAF66224.1| thymidylate synthase [Bos taurus] Length = 45 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/45 (66%), Positives = 38/45 (84%) Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + + G+F+HTL Sbjct: 1 LSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTL 45 >gi|33304370|gb|AAQ02614.1| thymidylate synthase [Hartmannella cantabrigiensis] Length = 65 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 8/65 (12%) Query: 91 GPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 GP+YG QWR + DY G +DQ+ ++ L+ +P RR ++SAWN A +D+MA Sbjct: 1 GPVYGFQWRHFGAKYVDMHTDYTGQGVDQLKDVIHKLKTNPNDRRIVMSAWNPADLDQMA 60 Query: 143 LPPCH 147 LPPCH Sbjct: 61 LPPCH 65 >gi|170758959|ref|YP_001786125.1| thymidylate synthase [Clostridium botulinum A3 str. Loch Maree] gi|169405948|gb|ACA54359.1| thymidylate synthase [Clostridium botulinum A3 str. Loch Maree] Length = 324 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 10/189 (5%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G +++ Y+ + ++ D G YG + S Y N ++Q I++ Sbjct: 65 EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGHNNVNQWHRIIE 121 Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + DP ++R + + N L K C FQF++ KL + R+ D + GI Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230 ++ S++ + LA+ + G++ H + H+Y F+ A+ L S + P+M Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241 Query: 231 IINPNIVDL 239 N DL Sbjct: 242 PKKDNWEDL 250 >gi|187777878|ref|ZP_02994351.1| hypothetical protein CLOSPO_01470 [Clostridium sporogenes ATCC 15579] gi|187774806|gb|EDU38608.1| hypothetical protein CLOSPO_01470 [Clostridium sporogenes ATCC 15579] Length = 328 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 5/175 (2%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G +++ Y+ + ++ D G YG + S Y N I+Q I++ Sbjct: 69 EALWYLSGSNDLDYISYYASNMKKYSMDGKILTGTAYGPKIFS---YGHNNINQWHRIIE 125 Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + DP ++R + + N L K C FQF++ +L + R+ D + GI Sbjct: 126 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHELYMTTFMRANDAYRGII 185 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 ++ S++ + LA+ + G++ H + H+Y F+ A+ LS S ++ Sbjct: 186 SDVFSFTFIQEFLATELNLDVGQYSHNVATTHIYEPDFKLAEKVLSESKSAKKEL 240 >gi|153939390|ref|YP_001390126.1| thymidylate synthase [Clostridium botulinum F str. Langeland] gi|152935286|gb|ABS40784.1| thymidylate synthase [Clostridium botulinum F str. Langeland] gi|295318216|gb|ADF98593.1| thymidylate synthase [Clostridium botulinum F str. 230613] Length = 324 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 10/189 (5%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G +++ Y+ + ++ D G YG + S Y N I+Q I++ Sbjct: 65 EALWYLSGSNDLDYISYYASNMKKYSMDGKILTGTAYGPKIFS---YGHNNINQWHRIIE 121 Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + DP ++R + + N L K C FQF++ KL + R+ D + GI Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230 ++ S++ + LA+ + G++ H + H+Y F+ A+ L S + P+M Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSDKKELSFPRM 241 Query: 231 IINPNIVDL 239 N DL Sbjct: 242 PKKDNWEDL 250 >gi|62327210|ref|YP_223948.1| thymidylate synthase [Phage phiJL001] gi|50059528|gb|AAT69500.1| thymidylate synthase [Phage phiJL001] Length = 350 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 13/165 (7%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW L G +++++ + ++ ++D + YG +WR++ D+ DQ+S V Sbjct: 68 EALWMLAGRHDLAFVEKFAKNM-RSFSDDGETMWGAYGWRWRTFFDF-----DQLSWAVH 121 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALP-----PCHCLFQFYV-DNGKLSCQLYQRSGDVF 171 LR P RR +V W L + A PC+ F + D G+L ++ RS D+ Sbjct: 122 RLRRLPNDRRVVVQMWAAGLDQERADAGGKDVPCNIAIHFRINDRGQLDMTVWNRSNDII 181 Query: 172 LGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 G N+ S+L +AS +G + G + D H Y++ F + Sbjct: 182 WGAYGANVVHMSILQEYVASAVGVEVGRYWQVSDDYHAYSDLFNK 226 >gi|296417111|ref|XP_002838207.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634124|emb|CAZ82398.1| unnamed protein product [Tuber melanosporum] Length = 237 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 40/137 (29%) Query: 3 QYLDLLRHVIKFGSDRRD--------------------------RTGVGTRSTFG-YQMR 35 QYLDL+ +++ G RRD RT GT S F Q+R Sbjct: 53 QYLDLVYNILTNGERRRDMCSTISYPFYTHPRRKHSLTNPHQLKRTRAGTISLFAPQQLR 112 Query: 36 FDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK-------- 86 F+L FPLLT K V K+++HE LWF+ G ++ + L GV IW+E + Sbjct: 113 FNLKNNTFPLLTKKHVFHKAIIHEPLWFVSGSTSNAPLSAVGVKIWEENGSRAYLDSIGL 172 Query: 87 ----DGELGPIYGVQWR 99 +G+LGP+Y + R Sbjct: 173 TERAEGDLGPVYRFRLR 189 >gi|168178163|ref|ZP_02612827.1| thymidylate synthase [Clostridium botulinum NCTC 2916] gi|182670584|gb|EDT82558.1| thymidylate synthase [Clostridium botulinum NCTC 2916] Length = 324 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 10/189 (5%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G +++ Y+ + ++ D G YG + S Y N +Q IV+ Sbjct: 65 EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGHNNANQWHRIVE 121 Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + DP ++R + + N L K C FQF++ KL + R+ D + GI Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230 ++ S++ + LA+ + G++ H + H+Y F+ A+ L S + P+M Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241 Query: 231 IINPNIVDL 239 N DL Sbjct: 242 PKKDNWEDL 250 >gi|258539603|ref|YP_003174102.1| thymidylate synthase [Lactobacillus rhamnosus Lc 705] gi|257151279|emb|CAR90251.1| Thymidylate synthase [Lactobacillus rhamnosus Lc 705] Length = 57 Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 32/47 (68%), Positives = 36/47 (76%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV 50 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV Sbjct: 6 YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKV 52 >gi|207727475|ref|YP_002255869.1| putative thymidylate synthase protein [Ralstonia solanacearum MolK2] gi|206590712|emb|CAQ56324.1| putative thymidylate synthase protein [Ralstonia solanacearum MolK2] Length = 294 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 18/186 (9%) Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGEL-GPIYGVQW----RSWPDYDGNVI 109 + EL W LRG S V + + S W A E+ G YG + R P Sbjct: 48 AIGELCWHLRGSSLVDEIAYYA-SRWRTIAGNATEVTGSNYGAKIFKGHRGAPS------ 100 Query: 110 DQISSIVQSLRADPYSRRHIV--SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 Q S ++ LR D SRR ++ S C QF + +GKL RS Sbjct: 101 -QWSRVINQLRIDRDSRRAVLYFSGTGEDTSSDSKDIACAVSLQFLIRDGKLDAIANMRS 159 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSRSP-- 224 D LG+P+++ +S+L M A+ +G G++ H G +HLY + A D+ SR+ Sbjct: 160 NDAMLGLPYDVFLFSMLQEMAANSLGVDVGKYNHVAGSLHLYESDLLLAKDIISSRASEI 219 Query: 225 RTLPQM 230 R +P+M Sbjct: 220 RPMPRM 225 >gi|167996982|gb|ACA14348.1| MilA [Streptomyces rimofaciens] Length = 334 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 8/212 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL LR + R G +R G R D + + ++ + E LW+ Sbjct: 13 YLSQLRDIYHSPEFRNAPRGQASRERIGAGFRLLDPVQRHISVPARRANVVFNFAEALWY 72 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G + ++ + I AD G YG + P ++Q ++V++L D Sbjct: 73 LSGSDRLDFIQYYAPGIAAYSADGRTLRGTAYGPRIFRHP---AGGVNQWENVVKTLTDD 129 Query: 123 PYSRRHIVSAWN---VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 P S+R ++ ++ +A+ D + + C QF + +G L Y R+ D F G ++ Sbjct: 130 PDSKRAVIQIFDPRELAVADNIDVA-CTLALQFLIRDGLLCGIGYMRANDAFRGAVSDVF 188 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 S++ L A +G G + H +G VH+Y++ Sbjct: 189 SFTFLQEFTARYLGLGIGTYHHVVGSVHIYDS 220 >gi|153840538|ref|ZP_01993205.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810] gi|149745801|gb|EDM56931.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810] Length = 136 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 14/116 (12%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWP 102 LL ++RG N + G WD A+ + GE +G +YGVQ R+W Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWA 116 >gi|116618549|ref|YP_818920.1| thymidylate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097396|gb|ABJ62547.1| thymidylate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 335 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 5/154 (3%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G++++SY+ + + D D G YG + + + + ++Q ++ Q Sbjct: 66 EALWYLTGNNSLSYISYYNKRMPDYSMDGQTLTGTAYGKKLFHFGEQN---LNQWQNVKQ 122 Query: 118 SLRADPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 L D S+R ++ ++ I++ C QF + N +L+ Y R+ D F GI Sbjct: 123 ELLNDADSKRAVIQIFDAHELTINQNLDVSCTLGLQFLIRNNQLNMVAYMRANDAFRGIV 182 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 +I S++ + +A + + G++ H++G +H+Y Sbjct: 183 SDIFSFTFIQEFMARELNLKVGKYYHSVGTMHIY 216 >gi|296531913|ref|ZP_06894716.1| thymidylate synthase [Roseomonas cervicalis ATCC 49957] gi|296267779|gb|EFH13601.1| thymidylate synthase [Roseomonas cervicalis ATCC 49957] Length = 351 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 97/220 (44%), Gaps = 10/220 (4%) Query: 6 DLLRHVIK--FGSDRRDRTGVG-TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 D LR S R +G G R G ++ + T + S + E LW+ Sbjct: 10 DALRQAFTRLLSSKTRTSSGKGPAREIIGAILKIRNPRARFSRTENRAVLFSCLGETLWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G ++++++ + K G G R + + + ++ +++ AD Sbjct: 70 LSGSNSLAHITYYIKKYRKLSGAKKGARLASGGYGPRIFGSGNKSQMNAAIQLIRRKLAD 129 Query: 123 PYSRRHIVSAWNVALIDKMAL------PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 P + A + + DK+ L PC C QF G+L ++ RS D ++G+P Sbjct: 130 PDGKTDTRQAV-IQIYDKLDLLRNSSDVPCTCTMQFLPRRGRLHMVVHMRSNDAYIGLPH 188 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 ++ +++ + ++A +G + G + H++G +HLY++ +A Sbjct: 189 DVFAFTFMQEIVAREVGLELGTYTHSVGSLHLYDHDERRA 228 >gi|319643105|ref|ZP_07997736.1| hypothetical protein HMPREF9011_03337 [Bacteroides sp. 3_1_40A] gi|317385273|gb|EFV66221.1| hypothetical protein HMPREF9011_03337 [Bacteroides sp. 3_1_40A] Length = 212 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 22/222 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L V+ G + ++ G R Q+ + + + K + +EL Sbjct: 1 MNKYYQILGKVLSSGKMQSNKKG-NIRYLLNEQLTLLPADLLDIFEGHTIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL- 119 F+RG+ NV G++ WD + S+P Y +++ +++ + Sbjct: 60 LFMRGERNVEKYREVGINWWDYCGS----------ILVNSYPTY----FEKLPPLIERIN 105 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R S+ +I+ + A PC L QF ++ G+L YQRS D LG+P +I Sbjct: 106 REKRNSKNYILFLGSTGTESNQA--PCLSLVQFQIEQGELVMTAYQRSSDANLGLPADI- 162 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Y L +++ I LG+VH+Y N+ ++ + LS Sbjct: 163 -YHL--YLISRQIELPLKSITLNLGNVHIYENNIDKTEQLLS 201 >gi|317504674|ref|ZP_07962639.1| thymidylate synthase [Prevotella salivae DSM 15606] gi|315664201|gb|EFV03903.1| thymidylate synthase [Prevotella salivae DSM 15606] Length = 212 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 20/216 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L +++ G + ++ G R Q+ + + + + K + +EL Sbjct: 1 MNKYYQMLDKILEQGKPQANKKG-NIRYLLNEQLSLSPADLLDIFESHGIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD V S+P Y + I+ I + R Sbjct: 60 LFMQGERQVEKYREVGINWWDYCG----------SVLVNSYPTYFEKLPPLIAKINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D+G+L YQRS D LG+P +I Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPADI-- 162 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 Y L M A I LG+VH+Y N+ + Sbjct: 163 YHLYLM--ARQIDLPLKNITLNLGNVHIYENNINRT 196 >gi|168183433|ref|ZP_02618097.1| thymidylate synthase [Clostridium botulinum Bf] gi|182673502|gb|EDT85463.1| thymidylate synthase [Clostridium botulinum Bf] Length = 324 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 10/189 (5%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G +++ Y+ + ++ D G YG + S Y N I+Q IV+ Sbjct: 65 EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGYNKINQWHRIVE 121 Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + D ++R + + N L K C FQF++ KL + R+ D + GI Sbjct: 122 LFKEDQDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIRKHKLYMTTFMRANDAYRGII 181 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230 ++ S++ + LA+ + G++ H + H+Y F+ A+ L S + P+M Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241 Query: 231 IINPNIVDL 239 N DL Sbjct: 242 PKKDNWEDL 250 >gi|255010683|ref|ZP_05282809.1| thymidylate synthase [Bacteroides fragilis 3_1_12] Length = 212 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 30/222 (13%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTG-----VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSV 55 M++Y +L V+ G + +R G + R T D+ +G P + K + Sbjct: 1 MNKYYQILGRVLASGKTQTNRKGNIRYLLNERLTLTPADLLDIFEGHP------IARKKL 54 Query: 56 VHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 EL F++G+ NV G++ WD + S+P Y ++++ + Sbjct: 55 KDELQLFMQGERNVEKYREAGINWWDYCG----------SILVNSYPTY----LEKLPPL 100 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 ++ + + S ++ V + PC L QF ++ G+L YQRS D LG+P Sbjct: 101 IERINREKRSSKNYVLFLGSTDAESNQ-APCLSLVQFQIEQGELVMTAYQRSSDANLGLP 159 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 +I Y L M + I LG+VH+Y N+ + + Sbjct: 160 ADI--YHLYLM--SRQIDLPLKSITLNLGNVHIYENNISRTE 197 >gi|32396172|gb|AAP42245.1| thymidylate synthase [Baboon gamma-herpesvirus] Length = 63 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 36/55 (65%) Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 DY+G +DQ+ +V + PY RR ++ AWN A + +MALPPCH L QFYV G Sbjct: 9 DYEGQGVDQLRYVVDLIARRPYDRRIVMCAWNPADLAQMALPPCHVLCQFYVARG 63 >gi|313148493|ref|ZP_07810686.1| predicted protein [Bacteroides fragilis 3_1_12] gi|313137260|gb|EFR54620.1| predicted protein [Bacteroides fragilis 3_1_12] Length = 240 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTG-----VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSV 55 M++Y +L V+ G + +R G + R T D+ +G P + K + Sbjct: 29 MNKYYQILGRVLASGKTQTNRKGNIRYLLNERLTLTPADLLDIFEGHP------IARKKL 82 Query: 56 VHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 EL F++G+ NV G++ WD + S+P Y ++++ + Sbjct: 83 KDELQLFMQGERNVEKYREAGINWWDYCGS----------ILVNSYPTY----LEKLPPL 128 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 ++ + + S ++ V + PC L QF ++ G+L YQRS D LG+P Sbjct: 129 IERINREKRSSKNYVLFLGSTDAESNQ-APCLSLVQFQIEQGELVMTAYQRSSDANLGLP 187 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +I Y L M + I LG+VH+Y N+ + + L+ Sbjct: 188 ADI--YHLYLM--SRQIDLPLKSITLNLGNVHIYENNISRTEQLLA 229 >gi|254882962|ref|ZP_05255672.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|298383655|ref|ZP_06993216.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|332878991|ref|ZP_08446704.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|254835755|gb|EET16064.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|298263259|gb|EFI06122.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|332683098|gb|EGJ55982.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 212 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 22/218 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +Y +L V+ G + ++ G R Q+ + + + K + +EL Sbjct: 1 MDKYYQILGKVLSSGKMQSNKKG-NIRYLLNEQLTLLPADLLDIFEGHTIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL- 119 F+RG+ NV G++ WD + S+P Y +++ +++ + Sbjct: 60 LFMRGERNVEKYREAGINWWDYCGS----------ILVNSYPTY----FEKLPPLIERIN 105 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R S+ +I+ + A PC L QF ++ G+L YQRS D LG+P +I Sbjct: 106 REKRNSKNYILFLGSTGTESNQA--PCLSLVQFQIEQGELVMTAYQRSSDANLGLPADI- 162 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 Y L +++ I LG+VH+Y N+ ++ + Sbjct: 163 -YHL--YLISRQIELPLKSITLNLGNVHIYENNIDKTE 197 >gi|317505072|ref|ZP_07963018.1| thymidylate synthase [Prevotella salivae DSM 15606] gi|315663783|gb|EFV03504.1| thymidylate synthase [Prevotella salivae DSM 15606] Length = 212 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y L +++ G + ++ G R Q+ + + + + K + +EL Sbjct: 1 MNKYYQTLGKILERGKIQTNKKG-NIRYLLNEQLSLSPADLLDIFESHGIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD V S+P Y + I I + R Sbjct: 60 LFMQGERLVEKYREAGINWWDYCG----------SVLVNSYPTYFEKLPPLIVRINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D G+L YQRS D LG+P +I Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADI-- 162 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 Y L M A I LG+VH+Y N+ E+ L L Sbjct: 163 YHLYLM--ARQIDLPLKNITLNLGNVHIYENNLERTRLLL 200 >gi|167906492|ref|ZP_02493697.1| putative thymidylate synthase [Burkholderia pseudomallei NCTC 13177] Length = 329 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + Y +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLH---YGERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 S++ L LAS +G + G + H +G +H+Y+++ + L S + P + Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDSDEAIVTAAAPPRM 244 >gi|242311181|ref|ZP_04810198.1| putative thymidylate synthase [Burkholderia pseudomallei 1106b] gi|242134420|gb|EES20823.1| putative thymidylate synthase [Burkholderia pseudomallei 1106b] Length = 329 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGYAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + Y +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLH---YGERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 S++ L LAS +G + G + H +G +H+Y+++ + L S + P + Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDSDAAIVTAAAPPRM 244 >gi|126456897|ref|YP_001075509.1| putative thymidylate synthase [Burkholderia pseudomallei 1106a] gi|167849524|ref|ZP_02475032.1| putative thymidylate synthase [Burkholderia pseudomallei B7210] gi|254193553|ref|ZP_04899987.1| putative thymidylate synthase [Burkholderia pseudomallei S13] gi|126230665|gb|ABN94078.1| putative thymidylate synthase [Burkholderia pseudomallei 1106a] gi|169650306|gb|EDS82999.1| putative thymidylate synthase [Burkholderia pseudomallei S13] Length = 329 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGYAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + Y +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLH---YGERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 S++ L LAS +G + G + H +G +H+Y+++ + L S + P + Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDSDAAIVTAAAPPRM 244 >gi|325271010|ref|ZP_08137596.1| thymidylate synthase [Prevotella multiformis DSM 16608] gi|324986656|gb|EGC18653.1| thymidylate synthase [Prevotella multiformis DSM 16608] Length = 212 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 22/217 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y D+L +++ G + ++ G + Q+ + + + + K + +EL Sbjct: 1 MNKYHDILEKIMRTGKMQHNKKG-NIKCLLNEQLSLSPADLLDIFESHDIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL- 119 F++G+ V G++ WD V S+P Y +Q+ ++ + Sbjct: 60 LFMQGERQVEKYREAGINWWDYCG----------SVLVNSYPTY----FEQLPPLIAKIN 105 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R S+ +I+ A PC L QF +D G L YQRS D LG+P +I Sbjct: 106 REKRNSKNYILFLGETNAESNQA--PCLSLVQFQIDEGVLVLSAYQRSSDANLGLPADI- 162 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 Y L M + I L +VH+Y ++ E+ Sbjct: 163 -YHLYLM--SRQIDLPLKSITLNLANVHIYESNLERT 196 >gi|238798208|ref|ZP_04641694.1| Deoxyuridylate hydroxymethyltransferase [Yersinia mollaretii ATCC 43969] gi|238717945|gb|EEQ09775.1| Deoxyuridylate hydroxymethyltransferase [Yersinia mollaretii ATCC 43969] Length = 335 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 97/199 (48%), Gaps = 8/199 (4%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW 101 F ++ +K + + + E +W L G ++ +L +H + E++D + YG + R+W Sbjct: 25 FLVIPERKNNVFAQLAETIWVLAGRGDLEFL-QHYLPRSIEFSDDNKTWRAAYGPRLRNW 83 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN-VALIDKMALPPCHCLFQFYVDNGKLS 160 DQ+S ++ L+ DP ++R ++S ++ ++ PC+ QF + L Sbjct: 84 ----MGKTDQVSCVISRLQEDPNTKRAVMSLFDPMSDYSDTKDVPCNNWLQFIQRDNILY 139 Query: 161 CQLYQRSGDVFLGIP-FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DL 218 + R+ D G N +S+L ++A+ +G+Q G +G H+Y+ H+ + DL Sbjct: 140 LHVTVRANDAIWGFSGINFFEWSVLHEIVATTLGYQVGTLSWYVGTFHIYSRHYNTSRDL 199 Query: 219 QLSRSPRTLPQMIINPNIV 237 ++P++ + I P + Sbjct: 200 LRIKNPKSPYECGIEPTSI 218 >gi|237794066|ref|YP_002861618.1| thymidylate synthase [Clostridium botulinum Ba4 str. 657] gi|229262626|gb|ACQ53659.1| thymidylate synthase [Clostridium botulinum Ba4 str. 657] Length = 324 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 10/189 (5%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G +++ Y+ + ++ D G YG + S Y N +Q IV+ Sbjct: 65 EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGHNNTNQWHRIVE 121 Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + D ++R + + N L K C FQF++ KL + R+ D + GI Sbjct: 122 LFKEDQDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230 ++ S++ + LA+ + G++ H + H+Y F+ A+ L S + P+M Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241 Query: 231 IINPNIVDL 239 N DL Sbjct: 242 PKKDNWEDL 250 >gi|237509869|ref|ZP_04522584.1| thymidylate synthase [Burkholderia pseudomallei MSHR346] gi|235002074|gb|EEP51498.1| thymidylate synthase [Burkholderia pseudomallei MSHR346] Length = 329 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + Y +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLH---YGERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 S++ L LAS +G + G + H +G +H+Y+++ + L S + P + Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDSDAAIVTAAAPPRM 244 >gi|311896637|dbj|BAJ29045.1| putative methyltransferase [Kitasatospora setae KM-6054] Length = 322 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 8/160 (5%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E +W L G S+ ++H + G L YG + R W +DQ+ + + Sbjct: 68 ETVWILSG-SSADWIHDFNSRL--AGLTDHGALQGAYGPRLRRW----HGQLDQLDYVRR 120 Query: 118 SLRADPYSRRHIVSAWNVAL-IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 L D SRR +V ++ PC ++FY+ G+L RS DV+LG+P+ Sbjct: 121 QLTRDNESRRAVVQIFDPGRDTAGHKDVPCTLGYRFYLREGRLEMHTSMRSQDVWLGLPY 180 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 ++ + ++L ++A +G + G++ H + +HLY H + A Sbjct: 181 DLITTTVLHELMAGWLGAEVGDYHHHVDSLHLYAQHQDTA 220 >gi|53722134|ref|YP_111119.1| thymidylate synthase protein [Burkholderia pseudomallei K96243] gi|76819171|ref|YP_335223.1| putative thymidylate synthase protein [Burkholderia pseudomallei 1710b] gi|126444953|ref|YP_001062559.1| putative thymidylate synthase [Burkholderia pseudomallei 668] gi|134283524|ref|ZP_01770224.1| putative thymidylate synthase [Burkholderia pseudomallei 305] gi|167723549|ref|ZP_02406785.1| putative thymidylate synthase [Burkholderia pseudomallei DM98] gi|167819685|ref|ZP_02451365.1| putative thymidylate synthase [Burkholderia pseudomallei 91] gi|167828063|ref|ZP_02459534.1| putative thymidylate synthase [Burkholderia pseudomallei 9] gi|167898126|ref|ZP_02485528.1| putative thymidylate synthase [Burkholderia pseudomallei 7894] gi|167914845|ref|ZP_02501936.1| putative thymidylate synthase [Burkholderia pseudomallei 112] gi|167922687|ref|ZP_02509778.1| putative thymidylate synthase [Burkholderia pseudomallei BCC215] gi|217418809|ref|ZP_03450316.1| putative thymidylate synthase [Burkholderia pseudomallei 576] gi|226198340|ref|ZP_03793910.1| putative thymidylate synthase [Burkholderia pseudomallei Pakistan 9] gi|254263271|ref|ZP_04954136.1| putative thymidylate synthase [Burkholderia pseudomallei 1710a] gi|254300441|ref|ZP_04967887.1| putative thymidylate synthase [Burkholderia pseudomallei 406e] gi|52212548|emb|CAH38574.1| putative thymidylate synthase protein [Burkholderia pseudomallei K96243] gi|76583644|gb|ABA53118.1| putative thymidylate synthase protein [Burkholderia pseudomallei 1710b] gi|126224444|gb|ABN87949.1| putative thymidylate synthase [Burkholderia pseudomallei 668] gi|134245273|gb|EBA45367.1| putative thymidylate synthase [Burkholderia pseudomallei 305] gi|157810077|gb|EDO87247.1| putative thymidylate synthase [Burkholderia pseudomallei 406e] gi|217398113|gb|EEC38128.1| putative thymidylate synthase [Burkholderia pseudomallei 576] gi|225929624|gb|EEH25641.1| putative thymidylate synthase [Burkholderia pseudomallei Pakistan 9] gi|254214273|gb|EET03658.1| putative thymidylate synthase [Burkholderia pseudomallei 1710a] Length = 329 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + Y +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLH---YGERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 S++ L LAS +G + G + H +G +H+Y+++ + L S + P + Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDSDAAIVTAAAPPRM 244 >gi|167565755|ref|ZP_02358671.1| putative thymidylate synthase [Burkholderia oklahomensis EO147] gi|167572854|ref|ZP_02365728.1| putative thymidylate synthase [Burkholderia oklahomensis C6786] Length = 329 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 7/216 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + Y +DQI V L R Sbjct: 71 LSGRNDLEFIEHYAPSMARYSPDGKHLPGTGYGARLLH---YGERSLDQIERAVDILSRD 127 Query: 122 DPYSRRHIVSAWNVA--LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ L + C Q + +G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEDLYRRNIDVSCTLGLQLLLRDGRLHTVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 S++ L +AS +G + G + H +G +H+Y+++ + Sbjct: 188 SFTFLQEYVASRLGCEVGTYSHHVGSIHVYDDNLPR 223 >gi|224165617|ref|XP_002338837.1| predicted protein [Populus trichocarpa] gi|222873586|gb|EEF10717.1| predicted protein [Populus trichocarpa] Length = 82 Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 45/82 (54%) Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT ++A V G+F+H +GD H+Y+ H QL + P+ P + IN D+ +F Sbjct: 1 LLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQEQLRKLPKPFPILKINSEKKDIDTF 60 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 DF L Y+PH I K++V Sbjct: 61 VAADFKLIGYDPHQKIEMKMAV 82 >gi|6573117|gb|AAF17556.1|AF201743_1 thymidylate synthase [Canis lupus familiaris] Length = 38 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 26/38 (68%), Positives = 33/38 (86%) Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + Sbjct: 1 ELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 38 >gi|237708114|ref|ZP_04538595.1| predicted protein [Bacteroides sp. 9_1_42FAA] gi|301309963|ref|ZP_07215902.1| thymidylate synthase [Bacteroides sp. 20_3] gi|229457942|gb|EEO63663.1| predicted protein [Bacteroides sp. 9_1_42FAA] gi|300831537|gb|EFK62168.1| thymidylate synthase [Bacteroides sp. 20_3] Length = 212 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 20/224 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L+ V+ G ++ R G +R + ++ + + K + EL Sbjct: 1 MNKYYQILKKVLADGKTQKGRKG-ESRYLLNETVTLSPAELLDIFEGHNIARKKLRSELS 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F+ G+ V G++ WD + S+P Y + I I + R Sbjct: 60 LFMSGERQVEKYREAGINWWDYCGS----------ILVNSYPTYFEKLPPLIGKINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + S+ +++ + A PC L QF ++ G+L YQRS D LG+P +I Sbjct: 110 S---SKNYVLFLGSTGTESNQA--PCLSLVQFQIEQGELVLTAYQRSSDANLGLPADI-- 162 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 Y L +++ I LG+VH+Y N+ + L+ +P Sbjct: 163 YHL--YLISRQIELPLKSITINLGNVHIYENNVTRTQELLAGNP 204 >gi|169841694|ref|ZP_02874803.1| thymidylate synthase [candidate division TM7 single-cell isolate TM7a] Length = 60 Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 6/60 (10%) Query: 45 LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWA-----DKDGELGP-IYGVQW 98 +TTKK+++ SV HELLWFL+G N+ YL ++GV IWDEW +K G+ P I G +W Sbjct: 1 MTTKKLYFNSVAHELLWFLKGTGNIEYLAQNGVHIWDEWPYKNYLEKTGQRIPEINGDEW 60 >gi|167742513|ref|ZP_02415287.1| putative thymidylate synthase [Burkholderia pseudomallei 14] Length = 236 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 7/224 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + + +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYGE---RGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 S++ L LAS +G + G + H +G +H+Y+++ + L S Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDS 231 >gi|261880956|ref|ZP_06007383.1| thymidylate synthase [Prevotella bergensis DSM 17361] gi|270332260|gb|EFA43046.1| thymidylate synthase [Prevotella bergensis DSM 17361] Length = 212 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 20/216 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y D+L +++ G + ++ G + Q+ + + + + K + +EL Sbjct: 1 MNKYHDILEKIMRTGKMQHNKKG-NIKYCLNEQLTLTPADLLDIFESHGIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD V S+P Y + I+ I R Sbjct: 60 LFMQGERQVEKYREAGINWWDYCG----------SVLVNSYPTYFEKLPPLIAKINNEKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D G+L YQRS D LG+P +I Sbjct: 110 N---SKNYVLFLGETNAESNQA--PCLSLVQFQIDEGELVISAYQRSSDANLGLPADI-- 162 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 Y L M + I L +VH+Y ++ E+ Sbjct: 163 YHLYLM--SRQIELPLKSITLNLANVHIYESNLERT 196 >gi|224535318|ref|ZP_03675857.1| hypothetical protein BACCELL_00179 [Bacteroides cellulosilyticus DSM 14838] gi|224523044|gb|EEF92149.1| hypothetical protein BACCELL_00179 [Bacteroides cellulosilyticus DSM 14838] Length = 212 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 20/216 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + ++ G R Q+ + + + K + +EL Sbjct: 1 MNKYYMILEKILVLGKMQDNKKG-NIRCLLNEQLVLTPADLLDIFEGHSIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD + S+P Y + I+ I + R Sbjct: 60 LFMQGERCVEKYREAGINWWDYCG----------AILVNSYPSYFEKLPPLIAKINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ + A PC L QF +D +L YQRS D LG+P +I Sbjct: 110 N---SKNYVLHLGATGVESNQA--PCLSLVQFQIDESELVISAYQRSSDANLGLPADI-- 162 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 Y L M + I LG+VH+Y N+ E+ Sbjct: 163 YHLYLM--SRQIELPLKSITLNLGNVHIYENNIEKT 196 >gi|288927902|ref|ZP_06421749.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108] gi|288330736|gb|EFC69320.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108] Length = 215 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 28/217 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y LL +++ G ++ ++ G T Q+ + + ++ + + + +EL Sbjct: 4 MNKYYSLLDNILSDGHNQTNKKGNIT-YLLNQQLTLTPADLLDIFESRSIARRKLRNELD 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ +V+ + G++ WD + S+P Y + I+ I + R Sbjct: 63 LFMQGERDVAKYRKAGITWWDYCG----------SILVNSYPTYFEKLPALIARINREKR 112 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ + A PC L QF +D+G+L YQRS D LG+P +I Sbjct: 113 T---SKNYVLFLGSTDAESNQA--PCLSLVQFQIDDGQLVISAYQRSSDANLGLPSDIYH 167 Query: 181 YSLLT----MMLASVIGFQYGEFIHTLGDVHLYNNHF 213 L++ + L S+ F LG+VH+Y N+ Sbjct: 168 LYLMSRQIELPLKSITLF--------LGNVHVYENNI 196 >gi|329957058|ref|ZP_08297625.1| thymidylate synthase [Bacteroides clarus YIT 12056] gi|328523326|gb|EGF50425.1| thymidylate synthase [Bacteroides clarus YIT 12056] Length = 239 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 20/213 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + ++ G + Q+ + + + K + +EL Sbjct: 28 MNKYYCILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRNELQ 86 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ NV G++ WD + S+P Y + I+ I + R Sbjct: 87 LFMQGERNVEKYREVGINWWDYCG----------SILVNSYPTYFEKLPPLIAKINREKR 136 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D+G+L YQRS D LG+P +I Sbjct: 137 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPSDI-- 189 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 Y L M A I LG+VH+Y N+ Sbjct: 190 YHLYLM--ARQIELPLKSITLYLGNVHIYENNI 220 >gi|296417085|ref|XP_002838194.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634111|emb|CAZ82385.1| unnamed protein product [Tuber melanosporum] Length = 95 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 51/89 (57%) Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 F++ S +LLT+M+A + G + GE I +GD H+Y++H + Q R P+ ++IN Sbjct: 7 FSMGSLALLTIMIAHMYGQEAGELIPIMGDAHVYSDHADTLKGQFERDPKEFHTLMINRQ 66 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + D+ ++E F L Y+P + +SV Sbjct: 67 VDDIDDSKFECFELLGYDPRPSNQMNMSV 95 >gi|225730207|gb|ACO24919.1| thymidylate synthase-like protein [Enterobacter aerogenes] Length = 105 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 36/54 (66%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 M Y DLLR VI G+D DRTGVGT S +G ++F+L +GFP T K + WK+ Sbjct: 1 MDNYKDLLREVIITGADSVDRTGVGTVSIWGAMLKFNLQEGFPATTCKGLAWKA 54 >gi|26984051|gb|AAN85116.1| Orf105 [Citrobacter freundii] gi|60280767|gb|AAX18271.1| thymidylate synthase-like protein [Escherichia coli] gi|60280779|gb|AAX18282.1| thymidylate synthase-like protein [Escherichia coli] gi|225730221|gb|ACO24932.1| thymidylate synthase-like protein [Escherichia coli] Length = 105 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 36/54 (66%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 M Y DLLR VI G+D DRTGVGT S +G ++F+L +GFP T K + WK+ Sbjct: 1 MDNYKDLLREVIITGTDSVDRTGVGTVSIWGAMLKFNLQEGFPATTCKGLAWKA 54 >gi|307352585|ref|YP_003893636.1| thymidylate synthase, methanogen type [Methanoplanus petrolearius DSM 11571] gi|307155818|gb|ADN35198.1| thymidylate synthase, methanogen type [Methanoplanus petrolearius DSM 11571] Length = 240 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 2/118 (1%) Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+ ++R D DG IDQ+ +++ L+A+P SRR W D+ PPC Q Sbjct: 93 PVGDSEFRG--DGDGKGIDQVEYLIEKLKAEPNSRRAEAITWFPPKDDQSDNPPCLQRIQ 150 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 +V +G+L+ + RS D+ + N+ + L M+A + G + HT H+Y Sbjct: 151 CFVRDGRLNMHVDFRSNDMLSALGANMYALVHLQKMIADRLKADVGWYSHTSVSAHMY 208 >gi|89899864|ref|YP_522335.1| thymidylate synthase [Rhodoferax ferrireducens T118] gi|89344601|gb|ABD68804.1| thymidylate synthase [Rhodoferax ferrireducens T118] Length = 347 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 23/183 (12%) Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWD----EWADKDGELGPIYGVQWRSWPDYDGNVID 110 + E++W L G ++L+ W+ ++A G YG + R+ + G +D Sbjct: 66 AIAEVIWILLGSDASNFLN-----FWNPVLPKYAGSGGTYHGAYGARLRT---HFG--LD 115 Query: 111 QISSIVQSLRADPYSRRHIVSAWN----VALIDKMALP---PCHCLFQFYVDNGKLSCQL 163 QI + Q L A+P SR+ ++ W+ + L D + PC+ + V KL Sbjct: 116 QIERVYQILSANPESRQAVLQIWDSREDLPLSDGASRDLDIPCNLVGMLKVRAQKLEWLQ 175 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 RS DVFLG P N+ ++ L ++A +G G F +HLY + +++ +++ Sbjct: 176 IMRSNDVFLGTPHNLVQFTSLQEIIAGWLGIGIGSFSLVTDSLHLYEHDYDRC--SMTKV 233 Query: 224 PRT 226 P T Sbjct: 234 PST 236 >gi|53728853|ref|ZP_00134736.2| COG0207: Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 146 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 7/119 (5%) Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 F +G L QRS +V LG+ +N I Y+ L +M A + G + G+ H + + H+Y Sbjct: 29 FLALDGTLYLNSTQRSANVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYE 87 Query: 211 NHFE-QADLQLSRSPRTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 + E D+QL R P P++ INP I L +DF + YE H AI SV Sbjct: 88 DQLELMRDVQLKRKPLASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 146 >gi|269968966|ref|ZP_06182902.1| Thymidylate synthase [Vibrio alginolyticus 40B] gi|269826423|gb|EEZ80821.1| Thymidylate synthase [Vibrio alginolyticus 40B] Length = 130 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 5/128 (3%) Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 L PC F + + L QRS DV LG+ FN+ + ++A + G + G+ H Sbjct: 3 CLRPCMYSHHFSLLDDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFH 62 Query: 202 TLGDVHLYNNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHA 256 + + H+Y + E D+QL R P P INP I L +DF + YE H Sbjct: 63 KIVNAHIYEDQLELMRDVQLKREPLKAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHD 122 Query: 257 AILAKVSV 264 I SV Sbjct: 123 PIRYPFSV 130 >gi|255690930|ref|ZP_05414605.1| thymidylate synthase [Bacteroides finegoldii DSM 17565] gi|260173138|ref|ZP_05759550.1| thymidylate synthase [Bacteroides sp. D2] gi|265750833|ref|ZP_06086896.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|298385881|ref|ZP_06995438.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|315921413|ref|ZP_07917653.1| conserved hypothetical protein [Bacteroides sp. D2] gi|319640489|ref|ZP_07995210.1| hypothetical protein HMPREF9011_00807 [Bacteroides sp. 3_1_40A] gi|260623265|gb|EEX46136.1| thymidylate synthase [Bacteroides finegoldii DSM 17565] gi|263237729|gb|EEZ23179.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|298261109|gb|EFI03976.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|313695288|gb|EFS32123.1| conserved hypothetical protein [Bacteroides sp. D2] gi|317387867|gb|EFV68725.1| hypothetical protein HMPREF9011_00807 [Bacteroides sp. 3_1_40A] Length = 214 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 20/213 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + ++ G + Q+ + + + K + EL Sbjct: 3 MNKYYRILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRSELQ 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ NV G++ WD + S+P Y + I+ I + R Sbjct: 62 LFMQGERNVEKYREAGINWWDYCGS----------ILVNSYPTYFEKLPPLIAKINRERR 111 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D G+L YQRS D LG+P +I Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDI-- 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 Y L M A I LG+VH+Y N+ Sbjct: 165 YHLYLM--ARQIELPLKSITLYLGNVHIYENNI 195 >gi|46552|emb|CAA68823.1| thymidylate synthase [Staphylococcus aureus] Length = 66 Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 EFIHT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE H A Sbjct: 1 EFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYESHPA 59 Query: 258 ILAKVSV 264 I A ++V Sbjct: 60 IKAPIAV 66 >gi|152002541|dbj|BAF73565.1| thymidylate synthase [Onion yellows phytoplasma OY-W] Length = 55 Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 22/40 (55%), Positives = 36/40 (90%) Query: 44 LLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83 +LTTKK++ +S++HELLWFL+GD+N+ Y+ ++ V+IW+EW Sbjct: 1 MLTTKKMNLRSIIHELLWFLKGDTNICYVVQNNVNIWNEW 40 >gi|254884020|ref|ZP_05256730.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|294778521|ref|ZP_06743944.1| thymidylate synthase [Bacteroides vulgatus PC510] gi|254836813|gb|EET17122.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|294447783|gb|EFG16360.1| thymidylate synthase [Bacteroides vulgatus PC510] Length = 214 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 20/214 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + ++ G + Q+ + + + K + EL Sbjct: 3 MNKYYRILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHHIARKKLRSELQ 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ NV G++ WD + S+P Y + I+ I + R Sbjct: 62 LFMQGERNVEKYREAGINWWDYCGS----------ILVNSYPTYFEKLPPLIAKINRERR 111 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D G+L YQRS D LG+P +I Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDI-- 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 Y L M A I LG+VH+Y N+ + Sbjct: 165 YHLYLM--ARQIELPLKSITLYLGNVHIYENNIQ 196 >gi|325298325|ref|YP_004258242.1| thymidylate synthase [Bacteroides salanitronis DSM 18170] gi|324317878|gb|ADY35769.1| thymidylate synthase [Bacteroides salanitronis DSM 18170] Length = 215 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 26/218 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG--FPLLTTKKVHWKSVVHEL 59 ++Y +L ++ G + +R G + R DL+ + + K + EL Sbjct: 5 NKYHCILEKIVCSGKTQTNRKG---NIRYLLNERLDLTPADLLEIFEGHNLARKKLKSEL 61 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 F RG+ NV G++ WD S+P Y ++++ ++ + Sbjct: 62 ELFTRGERNVDRYREAGITWWDYCGK----------TLVNSYPTY----LERLPPLIDRI 107 Query: 120 -RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 R S+ +++ + A PC L QF +++G+L YQRS D LG+P +I Sbjct: 108 NREKRNSKNYVLFLGETGVESNQA--PCLSLVQFQIEDGELVISAYQRSSDANLGLPADI 165 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 Y L + +A I T G+VH+Y N+ E Sbjct: 166 --YHLYS--IARQIELPLKSITLTFGNVHVYENNIENT 199 >gi|94496508|ref|ZP_01303085.1| Thymidylate synthase [Sphingomonas sp. SKA58] gi|94424254|gb|EAT09278.1| Thymidylate synthase [Sphingomonas sp. SKA58] Length = 78 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 41/78 (52%) Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246 MLA + GE I GDVHLY NH + QLSR P+ P + IN + +R ED Sbjct: 1 MLAQQCDLEPGEVIWQGGDVHLYLNHAPLVEEQLSRIPQGAPTLRINRQPSSIFDYRIED 60 Query: 247 FTLRSYEPHAAILAKVSV 264 F + Y P A I A V+V Sbjct: 61 FEVLDYSPQAHIAAPVAV 78 >gi|298386359|ref|ZP_06995915.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|298260736|gb|EFI03604.1| thymidylate synthase [Bacteroides sp. 1_1_14] Length = 214 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 20/213 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + ++ G + Q+ + + + K + EL Sbjct: 3 MNKYYRILDKILVAGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRSELQ 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ NV G++ WD + S+P Y + I+ I + R Sbjct: 62 LFMQGERNVEKYREAGINWWDYCGS----------ILVNSYPTYFEKLPPLIAKINREKR 111 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D G+L YQRS D LG+P +I Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDI-- 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 Y L M A I LG+VH+Y N+ Sbjct: 165 YHLYLM--ARQIELPLKSITLYLGNVHIYENNI 195 >gi|189427010|ref|YP_001950109.1| deoxyuridylate hydroxymethyltransferase [Ralstonia phage RSL1] gi|189233322|dbj|BAG41679.1| deoxyuridylate hydroxymethyltransferase [Ralstonia phage RSL1] Length = 414 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 25/171 (14%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW L G ++V + + + E+ D L YG +WR YD Q+++I+ Sbjct: 110 EALWMLAGRNDVEFASYYAKQML-EYTDDGSTLNGAYGFRWRQHFGYD-----QLNAIID 163 Query: 118 SLRADPYSRRHIVSAWNVA-----------------LIDKMALP-PCHCLFQFYVDNGKL 159 L+ +P SRR ++ W+ + L+++ + PC+ F GKL Sbjct: 164 ELKKNPASRRCVLQMWDASREFYSREDSWAVRRESDLLNQGSKDLPCNTSVMFDAQLGKL 223 Query: 160 SCQLYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 + + RS D+ G N+ +S+L +A G G + ++H+Y Sbjct: 224 NMTVTNRSNDMIWGCYGANVVHFSMLHEYVAEKCGLPLGHYYQVSNNLHVY 274 >gi|328462354|gb|EGF34424.1| thymidylate synthase [Lactobacillus rhamnosus MTCC 5462] Length = 59 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/45 (64%), Positives = 34/45 (75%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 +L+ V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKK H Sbjct: 2 ILQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKYH 46 >gi|152002540|dbj|BAF73564.1| thymidylate synthase [Onion yellows phytoplasma OY-W] Length = 44 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 24/42 (57%), Positives = 31/42 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF 42 M+ YLDL R +++ GS R DRT G +S FGYQMRF+L +GF Sbjct: 1 MNTYLDLCRFILQKGSFRNDRTNTGNKSVFGYQMRFNLEEGF 42 >gi|296111884|ref|YP_003622266.1| putative thymidylate synthase protein [Leuconostoc kimchii IMSNU 11154] gi|295833416|gb|ADG41297.1| putative thymidylate synthase protein [Leuconostoc kimchii IMSNU 11154] Length = 332 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 16/210 (7%) Query: 6 DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTK-KVHWKSVVHELLWFLR 64 D+ H F R G +R Y R + + K K + E+LW+L Sbjct: 17 DIYNHADFFNQPR----GFQSREKIAYHFRINQPVQRGIYNQKRKCNIIFNFAEVLWYLT 72 Query: 65 GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124 G++ + Y+ + + D D G YG + + G Q ++ L DP Sbjct: 73 GNNRLDYISYYNKKMPDYSMDGRILTGTAYGSKLF---NDKGQQSSQWQNVKDLLIKDPD 129 Query: 125 SRRHIVSAWNVALIDKMALP-----PCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 S+R ++ ++ + ++A+P C QF++ + L Y R+ D F GI ++ Sbjct: 130 SKRAVLQIFDGS---ELAIPNNLDVSCTLGLQFFIRDNHLDMIAYMRANDAFRGIVSDVF 186 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 S++ + ++A + G++ H++G +H+Y Sbjct: 187 SFTFIQELMARELHIPVGKYYHSVGTMHIY 216 >gi|187932666|ref|YP_001885547.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B] gi|187720819|gb|ACD22040.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B] Length = 333 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 17/164 (10%) Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIY-GVQWRSWPDYDGNVIDQIS 113 + EL+W + G+ +++W+ +K G IY G + + G DQI Sbjct: 65 ALAELVWIINGEEKSDI-----INMWNPSLEKYAGRGDIYHGAYGKRIRSHFG--FDQIE 117 Query: 114 SIVQSLRADPYSRRHIVSAWNVAL---IDKMALP-----PCHCLFQFYVDNGKLSCQLYQ 165 ++L+ P SR+ ++ ++ + I+K +P PC+ V NGKL Sbjct: 118 KAYEALQNTPESRQVVIQIYDTKVDFPIEK-GIPQDEDIPCNICSLLKVRNGKLEWSQIM 176 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 RS DV LG+P+N ++ L +LA + G + H +HLY Sbjct: 177 RSNDVLLGMPYNFIQFTGLQEILAGWLELDLGSYNHYSDSLHLY 220 >gi|198276501|ref|ZP_03209032.1| hypothetical protein BACPLE_02696 [Bacteroides plebeius DSM 17135] gi|237710406|ref|ZP_04540887.1| predicted protein [Bacteroides sp. 9_1_42FAA] gi|198270589|gb|EDY94859.1| hypothetical protein BACPLE_02696 [Bacteroides plebeius DSM 17135] gi|229455868|gb|EEO61589.1| predicted protein [Bacteroides sp. 9_1_42FAA] Length = 212 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 24/218 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG--FPLLTTKKVHWKSVVHE 58 M++Y L +++ G + +R G R + R L+ + + + K + E Sbjct: 1 MNKYYQTLDKILQTGKIQTNRKG---RIKYLLNERLMLTPADLLDIFESHGIARKKLKEE 57 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 L F++G +V G++ WD S+P Y + I+ I + Sbjct: 58 LKLFMQGVRDVEKYKEAGITWWDYCGH----------TLVNSYPTYFEKLPPLITRINRE 107 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 R S+ +++ + A PC L QF +D G+L YQRS D LG+P +I Sbjct: 108 KRN---SKNYVLFLGETGVESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADI 162 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 Y L M A + LG+VH+Y N+ ++ Sbjct: 163 --YHLYLM--ARQVELPLKSITLDLGNVHIYENNIDRT 196 >gi|330899059|gb|EGH30478.1| thymidylate synthase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 113 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 11/104 (10%) Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 +G PFN+ + L ++ + G+ F + +GD H+Y NH + + Q++R P +P+++ Sbjct: 10 IGTPFNLTEGAALLSLIGRLTGYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLV 69 Query: 232 IN---PNIVDLLSFRYE--------DFTLRSYEPHAAILAKVSV 264 I+ P ++ E DFTL Y+ H A+ A ++V Sbjct: 70 ISDRVPEFAKTGVYQPEWLELIEPSDFTLEGYQHHPAMTAPMAV 113 >gi|189463012|ref|ZP_03011797.1| hypothetical protein BACCOP_03714 [Bacteroides coprocola DSM 17136] gi|260642224|ref|ZP_05414962.2| thymidylate synthase [Bacteroides finegoldii DSM 17565] gi|189430294|gb|EDU99278.1| hypothetical protein BACCOP_03714 [Bacteroides coprocola DSM 17136] gi|260623201|gb|EEX46072.1| thymidylate synthase [Bacteroides finegoldii DSM 17565] Length = 233 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 24/218 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG--FPLLTTKKVHWKSVVHE 58 M++Y L +++ G + +R G R + R L+ + + + K + E Sbjct: 22 MNKYYQTLDKILQTGKIQTNRKG---RIKYLLNERLMLTPADLLDIFESHGIARKKLKEE 78 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 L F++G +V G++ WD S+P Y + I+ I + Sbjct: 79 LKLFMQGVRDVEKYKEAGITWWDYCGH----------TLVNSYPTYFEKLPPLITRINRE 128 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 R S+ +++ + A PC L QF +D G+L YQRS D LG+P +I Sbjct: 129 KRN---SKNYVLFLGETGVESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADI 183 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 Y L M A + LG+VH+Y N+ ++ Sbjct: 184 --YHLYLM--ARQVELPLKSITLDLGNVHIYENNIDRT 217 >gi|154685031|ref|YP_001420192.1| hypothetical protein RBAM_005690 [Bacillus amyloliquefaciens FZB42] gi|154350882|gb|ABS72961.1| hypothetical protein RBAM_005690 [Bacillus amyloliquefaciens FZB42] Length = 336 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 87/182 (47%), Gaps = 6/182 (3%) Query: 45 LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY 104 L+++K + E+LW+L G +++ ++ + + +K G YG + + + Sbjct: 52 LSSRKTNIVFNFAEVLWYLSGSNDLDFISYYNKKMPSYSMNKKTLTGTAYGPKIFEFGNA 111 Query: 105 DGNVIDQISSIVQSLRADPYSRR---HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 N ++I +++ D S+R I A + +++ + + C QF+V G+L Sbjct: 112 KLNQWNRIKNLLTQEDID--SKRAFIQIFDASELFVLENIDVS-CTIGLQFFVREGELYM 168 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 R+ D F G+ ++ S++ + ++A + + GE+ H G +H+Y++ E A L Sbjct: 169 SSVMRANDAFRGMISDLFSFTFMQELMARELRLEVGEYFHNAGSIHIYDSDHEWAKTVLE 228 Query: 222 RS 223 + Sbjct: 229 EA 230 >gi|148550216|ref|YP_001270318.1| thymidylate synthase-like protein [Pseudomonas putida F1] gi|148514274|gb|ABQ81134.1| Thymidylate synthase-like protein [Pseudomonas putida F1] Length = 113 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 11/104 (10%) Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG PFN+ + L + + G+ F + +GD H+Y NH + + QL R P P+++ Sbjct: 10 LGTPFNLTEGAALLSLFGRLTGYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLV 69 Query: 232 IN---PNIVDLLSFRYE--------DFTLRSYEPHAAILAKVSV 264 I+ P+ + + E DF L YE HA + A ++V Sbjct: 70 ISDRVPSFAETGKYEPEWLEKIEPSDFWLEGYEHHAPMTAPMAV 113 >gi|254884961|ref|ZP_05257671.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|254837754|gb|EET18063.1| predicted protein [Bacteroides sp. 4_3_47FAA] Length = 214 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 20/213 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + +R G + + + + + K + +EL Sbjct: 3 MNKYYQVLDKILATGKTQSNRKG-NIQYLLNEVLVLTPADLLDIFEGHHIARKKLRNELH 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD + S+P Y +++ ++ + Sbjct: 62 LFMQGERQVEKYREAGINWWDYCG----------SILVNSYPTY----FEKLPPLIDKIN 107 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + + ++ V ++ PC L QF +DNG+L YQRS D LG+P +I Sbjct: 108 REKRNSKNYVLFLGETGVESNQ-TPCLSLVQFQIDNGELVLSAYQRSSDANLGLPADI-- 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 Y L M A I LG+VH+Y N+ Sbjct: 165 YHLYLM--ARQIELPLKSITLYLGNVHIYENNI 195 >gi|154150064|ref|YP_001403682.1| thymidylate synthase [Candidatus Methanoregula boonei 6A8] gi|153998616|gb|ABS55039.1| thymidylate synthase [Methanoregula boonei 6A8] Length = 241 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 48/101 (47%) Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +DQI I LR P SRR I WN + +K+ PC L Q + +GKL ++ RS Sbjct: 104 VDQIEYIATKLRQSPVSRRAIAITWNPVIDEKLNDCPCLQLVQCVLRDGKLCMRVIFRSN 163 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 D+ N+ + L +A +G + G + H H+Y Sbjct: 164 DMLTAAGANMYALVQLQKSIAERLGVECGTYTHISLVPHIY 204 >gi|219850761|ref|YP_002465193.1| thymidylate synthase, methanogen type [Methanosphaerula palustris E1-9c] gi|219545020|gb|ACL15470.1| thymidylate synthase, methanogen type [Methanosphaerula palustris E1-9c] Length = 244 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 52/101 (51%) Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +DQI+ I++ L+ P +RR + WN + +++ PC L Q + +G L ++ RS Sbjct: 104 VDQIAYIIRKLQEAPATRRALAITWNPVVDEQVKDCPCLQLVQCVIRDGALQMKVVFRSN 163 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 D+ N+ + L +M+A +G + G + H H+Y Sbjct: 164 DMLTASGANMFALVHLQLMIAEALGVRIGRYTHIALVPHVY 204 >gi|325953737|ref|YP_004237397.1| thymidylate synthase [Weeksella virosa DSM 16922] gi|323436355|gb|ADX66819.1| thymidylate synthase [Weeksella virosa DSM 16922] Length = 211 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 20/214 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L +IK G + ++ G T ++ + + + + EL Sbjct: 1 MNKYHIILDKIIKKGKVQSNKKGNIT-YLLNQKLELKPTDLLEIFEEHGIARNKLKTELE 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F +G+ +G+ WD GPI S+P Y +Q+ +++ + Sbjct: 60 LFTKGERLTERYRENGIEWWDYC-------GPIL---VNSYPTY----FEQLPDLIKKIN 105 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + + ++ V ++ PC L QF ++ GKL YQRS D LG+P +I Sbjct: 106 KEKRNSKNYVLFLGRTDVESNQ-QPCLSLVQFQIEKGKLIISAYQRSSDASLGLPADI-- 162 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 Y L +++ I L +VH+Y N+ E Sbjct: 163 YHL--YLISRQINLPLKSITLMLANVHIYENNVE 194 >gi|124484937|ref|YP_001029553.1| hypothetical protein Mlab_0109 [Methanocorpusculum labreanum Z] gi|124362478|gb|ABN06286.1| thymidylate synthase [Methanocorpusculum labreanum Z] Length = 239 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 49/100 (49%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQI I+ LR P SRR + W + K+A PC L Q V +GKL+ ++ RS D Sbjct: 104 DQIQYIIDKLRECPVSRRAVAVTWCPPVDAKLADCPCLQLVQCVVRDGKLNMKIVFRSND 163 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 + N+ + + L +A IG + G + H H+Y Sbjct: 164 MLSAAGSNMFALAKLQEYIAEKIGVEVGTYTHISLVPHVY 203 >gi|32034581|ref|ZP_00134737.1| COG0207: Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 133 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 2/89 (2%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + ++++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD 87 LL ++RG N + + G WD A+++ Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQN 89 >gi|49247552|gb|AAT58678.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. GRW2] Length = 78 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRS--------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +YD +DQ+ +I+ ++ DP SRR ++ AWNV +DK Sbjct: 19 DLGPIYGFQWRHFGAEYTNMYDNYDNKGVDQVKNIIDLIKNDPNSRRILLCAWNVKDLDK 78 >gi|110006193|gb|ABG48599.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PA] Length = 78 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRS--------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ IDQ+ +I+ ++ DP SRR I+ AWNV +DK Sbjct: 19 DLGPIYGFQWRHFGAEYSDMYDNYENKGIDQLKNIINLIKNDPTSRRIILCAWNVKDLDK 78 >gi|110006229|gb|ABG48617.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT] gi|110006231|gb|ABG48618.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU] gi|112293883|gb|ABI15067.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT] gi|112293885|gb|ABI15068.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT] gi|112293887|gb|ABI15069.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU] gi|112293889|gb|ABI15070.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU] Length = 78 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+SAWNV +DK Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILSAWNVKDLDK 78 >gi|301057695|ref|ZP_07198768.1| putative thymidylate synthase [delta proteobacterium NaphS2] gi|300448156|gb|EFK11848.1| putative thymidylate synthase [delta proteobacterium NaphS2] Length = 228 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 56/113 (49%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 QI+ +++ R D + ++ PPC + +GKL +Y RS D+ Sbjct: 106 QITEVIRMYREDGFGTNQAYMTVGDPKAIQLVDPPCLRGIDTRIKDGKLHFIVYFRSWDL 165 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 + G+P N+ + LL +AS IG + GE I + +HLY+ +E A L+ ++ Sbjct: 166 WNGLPANLGAIQLLKEYMASSIGVEDGEIIASSKGLHLYDYVWELAQLRTCKT 218 >gi|15668688|ref|NP_247487.1| thymidylate synthase [Methanocaldococcus jannaschii DSM 2661] gi|3219867|sp|Q57931|TYSY_METJA RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|1591214|gb|AAB98502.1| thymidylate synthase (thyA) [Methanocaldococcus jannaschii DSM 2661] Length = 222 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 5/111 (4%) Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGK 158 Y I+QI I++ L SRR + WN + D+ PC L QF + NGK Sbjct: 92 YADEKINQIDYIIEKLNQQKNSRRAVAITWNPKIDIEVSRDERGSVPCLQLVQFLIRNGK 151 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 L + RS D L N L +A +G YG + H +H+Y Sbjct: 152 LYQTVIFRSNDALLAFVSNAIGLITLGEYIAKKVGVGYGTYTHHAISMHIY 202 >gi|73668429|ref|YP_304444.1| thymidylate synthase [Methanosarcina barkeri str. Fusaro] gi|121725683|sp|Q46E28|TYSY_METBF RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|72395591|gb|AAZ69864.1| thymidylate synthase [Methanosarcina barkeri str. Fusaro] Length = 217 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 4/124 (3%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + R+W +DQI +++ L+ +P SRR I W + K+ PC L F Sbjct: 91 YGQRLRNW----HGKVDQIDYVIEKLQQNPTSRRAIAVTWIPPVDTKVNEVPCMMLDDFK 146 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 + +GK+ RS D P N+ S L +A +G + G H+Y++ + Sbjct: 147 IRDGKIHLTTLFRSHDFGGAYPANLYGLSKLLEYVADKVGTKPGTITTISISAHIYDHDW 206 Query: 214 EQAD 217 + + Sbjct: 207 DMVE 210 >gi|110006195|gb|ABG48600.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|110006197|gb|ABG48601.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PC] gi|112293821|gb|ABI15036.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293823|gb|ABI15037.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293825|gb|ABI15038.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293827|gb|ABI15039.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293829|gb|ABI15040.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293831|gb|ABI15041.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293833|gb|ABI15042.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293835|gb|ABI15043.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] Length = 78 Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRS--------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ IDQ+ +I+ ++ DP SRR I+ AWNV +D+ Sbjct: 19 DLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNDPTSRRIILCAWNVKDLDQ 78 >gi|110006199|gb|ABG48602.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pD] gi|110006201|gb|ABG48603.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pE] gi|112293837|gb|ABI15044.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pD] Length = 78 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRS--------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DK Sbjct: 19 DLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDK 78 >gi|323941565|gb|EGB37746.1| thymidylate synthase [Escherichia coli E482] Length = 52 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 32/51 (62%) Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Q LQLSR PR LP++II + +R+EDF + Y+PH I A V++ Sbjct: 2 DQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 52 >gi|110006233|gb|ABG48619.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pV] Length = 78 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DK Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDK 78 >gi|126178499|ref|YP_001046464.1| thymidylate synthase [Methanoculleus marisnigri JR1] gi|125861293|gb|ABN56482.1| thymidylate synthase [Methanoculleus marisnigri JR1] Length = 241 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 46/101 (45%) Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +DQI I + L SRR + WN + + + PC L Q + NGKL ++ RS Sbjct: 104 VDQIDYIARKLEQAANSRRAVAVTWNPVVDENLDDCPCLQLVQCLLRNGKLQMKVVFRSN 163 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 D+ N+ + L M+A +G G + H H+Y Sbjct: 164 DILSAAGSNMYALVRLQKMIADRLGVPCGRYTHIALVPHIY 204 >gi|220906251|ref|YP_002481562.1| thymidylate synthase [Cyanothece sp. PCC 7425] gi|219862862|gb|ACL43201.1| thymidylate synthase [Cyanothece sp. PCC 7425] Length = 508 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 12/157 (7%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + RSW D QI +++ L D S R ++S W+VA + A PPC Sbjct: 270 YGQRLRSWFGRD-----QIQQVIEKLSEDLDSARAVMSLWDVADHEAQASPPCLNHLWVR 324 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG------FQYGEFIHTLGDVH 207 + G+LS RS D+F P N L L I G I H Sbjct: 325 IVEGELSLTATFRSNDMFSAWPANAMGLRALQQHLRDRISQNIAQPLHLGPLITLSQSAH 384 Query: 208 LYNNHFEQAD-LQLSRSPRTLPQMIINPNIVDLLSFR 243 +Y++ +E AD L ++ P P+ +P L+S Sbjct: 385 IYDDCWENADRLLQTQYPHCQPRTYSDPAGSFLISLE 421 >gi|332879334|ref|ZP_08447031.1| hypothetical protein HMPREF9074_02783 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682754|gb|EGJ55654.1| hypothetical protein HMPREF9074_02783 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 177 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 19/164 (11%) Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 K + EL F++G+ +V G++ WD S+P Y + I Sbjct: 17 KKLKTELGLFMQGERDVERYREAGITWWDYCGQ----------TLVNSYPTYFEKLPPLI 66 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 + I + R S+ +++ + A PC L QF +D G+L YQRS D L Sbjct: 67 AQINEEKRN---SKNYVLFLGATGVETNQA--PCLSLVQFQIDEGELVVSAYQRSSDANL 121 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 G+P +I Y L M + I LG+VH+Y N+ + Sbjct: 122 GLPSDI--YHLYLM--SRQIDLPLKSITLDLGNVHIYENNISRT 161 >gi|282599234|ref|YP_003358546.1| putative thymidylate synthase [Shigella phage phiSboM-AG3] gi|226973540|gb|ACO94293.1| putative thymidylate synthase [Shigella phage phiSboM-AG3] Length = 348 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 29/182 (15%) Query: 54 SVVHELLWFLRGDSNVSYLHR---HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVID 110 + + E W L G +++ +L R + D+ GV WR+ Sbjct: 67 AAIGETFWVLSGRNDIKFLSRVLPRAANFSDD------------GVTWRAAYGPRLYAHG 114 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP-------------CHCLFQFYVDNG 157 Q+ S++ LR +P +R+ ++ ++ AL L C+ F + +G Sbjct: 115 QLDSVINRLRKNPNTRQAYLTIYDPALDSDAGLAKFSESGEAKTKDMVCNLALLFAIVDG 174 Query: 158 KLSCQLYQRSGDVFLGIP-FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 +L+ + RS DV G+ N +S+L ++A V+ G++ ++H YNN Q Sbjct: 175 RLNLTVINRSQDVLWGMSSINFIEFSILQEVIAQVLDVDVGQYKLFSNNLHYYNNEVSQK 234 Query: 217 DL 218 L Sbjct: 235 QL 236 >gi|110006227|gb|ABG48616.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pS] Length = 78 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ +DQ+ +I+ ++ +P SRR I+ AWNV +DK Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKDLDK 78 >gi|110006225|gb|ABG48615.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR] gi|112293879|gb|ABI15065.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR] gi|112293881|gb|ABI15066.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR] Length = 78 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ +DQ+ +I+ ++ +P SRR I+ AWNV +DK Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKDLDK 78 >gi|25091474|sp|Q8THH4|TYSY_METAC RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase Length = 217 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 4/124 (3%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + R+W + +DQI +++ L+ P SRR W + K+ PC L F Sbjct: 91 YGQRLRNWNEE----VDQIEYVIEKLQESPTSRRATAVTWIPPVDTKVNEVPCMILDDFK 146 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 + +GK+ RS D P N+ S L +A +G + G H+Y++ + Sbjct: 147 IRDGKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAGRVGVEPGMITTVSISAHVYDHDW 206 Query: 214 EQAD 217 + + Sbjct: 207 DMVE 210 >gi|167841922|ref|ZP_02468606.1| thymidylate synthase [Burkholderia thailandensis MSMB43] Length = 288 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 20/224 (8%) Query: 6 DLLR----HVIKFGSDRRDRTGVGTRS-TFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 DL+R +++K G + R G ++ Y ++ S+ L K + + ELL Sbjct: 28 DLVRQGIHNIVKEGRKIKSRAGDAMQAYGVNYILKDPRSRVHSLRNGAK---RYLCRELL 84 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYG--VQWRSWPDYDGNVIDQISSIVQS 118 + G + W DKDG + YG V + Y GN Q + IV Sbjct: 85 AYFSGSLKAENGLANASKFWMTLTDKDGNVNSNYGYYVFYEPVEKY-GN---QYNWIVSM 140 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 L+++ SRR I++ PC QF++ L C+ RS DV G+P+++ Sbjct: 141 LKSNQDSRRAIININQNYHKSDTKDFPCTIGMQFFIRENHLFCETISRSTDVITGLPYDM 200 Query: 179 ASYSLLTMMLASVI------GFQYGEFIHTLGDVHLYNNHFEQA 216 +S + ++ S + Q G I +Y+N E+A Sbjct: 201 GFFSFVHELVHSDLVSQGYDDLQLGSTIMKTTFTQIYDNAMEKA 244 >gi|20093327|ref|NP_619402.1| thymidylate synthase [Methanosarcina acetivorans C2A] gi|19918687|gb|AAM07882.1| thymidylate synthase [Methanosarcina acetivorans C2A] Length = 230 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 4/124 (3%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + R+W + +DQI +++ L+ P SRR W + K+ PC L F Sbjct: 104 YGQRLRNWNEE----VDQIEYVIEKLQESPTSRRATAVTWIPPVDTKVNEVPCMILDDFK 159 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 + +GK+ RS D P N+ S L +A +G + G H+Y++ + Sbjct: 160 IRDGKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAGRVGVEPGMITTVSISAHVYDHDW 219 Query: 214 EQAD 217 + + Sbjct: 220 DMVE 223 >gi|110006203|gb|ABG48604.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pF] Length = 78 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRS--------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +D+ Sbjct: 19 DLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDQ 78 >gi|110006205|gb|ABG48605.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum] gi|110006207|gb|ABG48606.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PH] gi|110006209|gb|ABG48607.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PI] gi|110006213|gb|ABG48609.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pK] gi|110006215|gb|ABG48610.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pL] gi|110006217|gb|ABG48611.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM] gi|110006219|gb|ABG48612.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN] gi|112293839|gb|ABI15045.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293841|gb|ABI15046.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293843|gb|ABI15047.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293845|gb|ABI15048.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293847|gb|ABI15049.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293849|gb|ABI15050.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293851|gb|ABI15051.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum] gi|112293853|gb|ABI15052.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum] gi|112293855|gb|ABI15053.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293857|gb|ABI15054.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293859|gb|ABI15055.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293861|gb|ABI15056.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293863|gb|ABI15057.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293865|gb|ABI15058.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293867|gb|ABI15059.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293869|gb|ABI15060.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293871|gb|ABI15061.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM] gi|112293873|gb|ABI15062.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM] gi|112293875|gb|ABI15063.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN] gi|112293877|gb|ABI15064.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN] Length = 78 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +D+ Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDQ 78 >gi|296108807|ref|YP_003615756.1| thymidylate synthase, methanogen type [Methanocaldococcus infernus ME] gi|295433621|gb|ADG12792.1| thymidylate synthase, methanogen type [Methanocaldococcus infernus ME] Length = 212 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 1/117 (0%) Query: 94 YGVQWRSWPDYDGNVI-DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 Y + R +P YD + DQ+S +++ L+ + SRR ++S W + K+ PC F Sbjct: 82 YYERIREYPSYDRKLKNDQLSYVIEKLKNNSTSRRAVISLWQPFIDQKVKDVPCLQHIGF 141 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 + KL + RS D+ L N L ++A + + E+ H + + H+Y Sbjct: 142 QLREDKLIMSVLFRSNDILLAFHSNALGLISLGELVAKSLEVELKEYNHFIYNAHIY 198 >gi|159905677|ref|YP_001549339.1| thymidylate synthase [Methanococcus maripaludis C6] gi|159887170|gb|ABX02107.1| thymidylate synthase, methanogen type [Methanococcus maripaludis C6] Length = 210 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 46/102 (45%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQI IV L+ SRR + WN + + PC + QF V + KL + RS D Sbjct: 100 DQIEYIVNKLKEQINSRRAVAITWNPYIDQTVKDVPCLQIVQFLVRDNKLYQTVLFRSND 159 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FL N L M+A +G + ++ H +H+Y+ Sbjct: 160 AFLAFHANAIGLIALGEMVAEKLGIELVKYTHHSVSMHVYSE 201 >gi|110006211|gb|ABG48608.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pJ] Length = 78 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +D+ Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDQ 78 >gi|45358942|ref|NP_988499.1| thymidylate synthase [Methanococcus maripaludis S2] gi|45047808|emb|CAF30935.1| Thymidylate synthase [Methanococcus maripaludis S2] Length = 212 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 46/101 (45%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQI IV L+ SRR + WN + + PC + QF V + KL + RS D Sbjct: 100 DQIEYIVNKLKEQINSRRAVAITWNPYIDQSVKDVPCLQIVQFLVRDNKLYQTVLFRSND 159 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FL N L M+A +G + ++ H +H+Y+ Sbjct: 160 AFLAFHANAIGLIALGEMVAEKLGIELVKYTHHSVSMHVYS 200 >gi|11499629|ref|NP_070871.1| thymidylate synthase, putative [Archaeoglobus fulgidus DSM 4304] gi|2648479|gb|AAB89199.1| thymidylate synthase, putative [Archaeoglobus fulgidus DSM 4304] Length = 480 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 16/159 (10%) Query: 84 ADKDGEL-------GPIYGVQWRS-WPDYDGNVIDQISSIVQSLRADPYSRRHIVS---A 132 A DGE+ G Y R+ + D D +DQ+ +++ L+ D R V Sbjct: 322 AKLDGEVRRSILKEGEEYTYAERARYCDRDDVKVDQLYKVIEKLKEDSCRRDCYVGISRP 381 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 W++ L D+ PPC +QF +L Y RS D + + N+ +++LLT +A + Sbjct: 382 WDL-LSDE---PPCLRGYQFSKYGDELLGTFYMRSNDAYGAMHANMYAFALLTKYVAELT 437 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQA-DLQLSRSPRTLPQM 230 GF+ + H D H+Y F+ ++ SP L ++ Sbjct: 438 GFKSYRYNHFALDAHIYAEFFDAVREILYPESPSYLDKV 476 >gi|330507653|ref|YP_004384081.1| thymidylate synthase, methanogen type [Methanosaeta concilii GP-6] gi|328928461|gb|AEB68263.1| thymidylate synthase, methanogen type [Methanosaeta concilii GP-6] Length = 245 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 51/121 (42%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + R+W +DQI +Q L+ P +RR W + + PC + F Sbjct: 113 YGERLRAWRLPGTPPLDQIDMAIQRLKESPATRRATSVTWIPPVDGERNEVPCMIVDDFK 172 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 + G+L ++ RS D P N+ + L A +G Q G T H+Y + + Sbjct: 173 LRGGRLHLAIFFRSHDFAGAYPANLYGLARLLEYAAREVGAQPGSISTTSSSAHIYEHDW 232 Query: 214 E 214 + Sbjct: 233 D 233 >gi|49247550|gb|AAT58677.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. SGS1] Length = 73 Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +D+ Sbjct: 14 DLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDQ 73 >gi|110006221|gb|ABG48613.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pO] Length = 78 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ +DQ+ +I+ ++ +P SRR I+ AWNV +D+ Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKDLDQ 78 >gi|49247528|gb|AAT58666.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. GRW1] gi|49247530|gb|AAT58667.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. GRW8] gi|49247532|gb|AAT58668.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. BRW1] gi|49247534|gb|AAT58669.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. GRW5] Length = 78 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + DY IDQ+ +++ ++ DP +RR I+ AWN +DK Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDDYTDKGIDQLKNVINLIKTDPTNRRIILCAWNPKDLDK 78 >gi|298674842|ref|YP_003726592.1| thymidylate synthase, methanogen type [Methanohalobium evestigatum Z-7303] gi|298287830|gb|ADI73796.1| thymidylate synthase, methanogen type [Methanohalobium evestigatum Z-7303] Length = 217 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 4/124 (3%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + R+W D IDQIS ++ L +RR W + K+ PC + F Sbjct: 91 YGQRLRNWNDE----IDQISYVIDKLTESSSTRRATAVTWVPPIDTKVDEVPCMIIDDFK 146 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 + NGKL RS D P N+ S L +A G G+ H+Y + + Sbjct: 147 IRNGKLHLTTLFRSHDFAGAYPANLYGLSGLLRYVAEKSGVSTGKITTISVSAHIYEHDW 206 Query: 214 EQAD 217 ++ + Sbjct: 207 DKIE 210 >gi|90580552|ref|ZP_01236357.1| thymidylate synthase [Vibrio angustum S14] gi|90438210|gb|EAS63396.1| thymidylate synthase [Photobacterium angustum S14] Length = 99 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%) Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPRTLPQ 229 LG+ FN L ++A + G + G+ H + + H+Y + E D+QL R+P PQ Sbjct: 1 MLGLNFNQVQVFTLLALMAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKRTPFASPQ 60 Query: 230 MIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 + IN I L +DF + YE H AI SV Sbjct: 61 LKINQKIKSLEDLETWVTLDDFEVVGYEHHDAIQYPFSV 99 >gi|108863583|gb|ABG22166.1| DHFR-TS [Haemoproteus lanii] Length = 73 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + DY +DQ+ +++ ++ DP SRR I+ AWN ++K Sbjct: 14 DLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPISRRIILCAWNPKDLEK 73 >gi|150399440|ref|YP_001323207.1| thymidylate synthase [Methanococcus vannielii SB] gi|150012143|gb|ABR54595.1| thymidylate synthase [Methanococcus vannielii SB] Length = 212 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 47/107 (43%) Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 D DQI IV L+++ SRR + WN + ++ PC QF + + KL Sbjct: 93 DLKNRKFDQIEYIVNKLKSEKNSRRAVSITWNPYIDTEVKDVPCLQFVQFLIRDNKLYQT 152 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 + RS D FL N L ++A +G + + H +H+Y Sbjct: 153 VLFRSNDAFLAFHANAIGLISLGELIAEKLGIELVRYTHHSVSMHVY 199 >gi|108863585|gb|ABG22167.1| DHFR-TS [Haemoproteus lanii] Length = 73 Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + DY +DQ+ +++ ++ DP SRR I+ AWN ++K Sbjct: 14 DLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPTSRRIILCAWNPKDLEK 73 >gi|326804560|ref|YP_004327431.1| Thymidylate synthase [Salmonella phage Vi01] gi|301795210|emb|CBW37928.1| Thymidylate synthase [Salmonella phage Vi01] Length = 346 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 34/197 (17%) Query: 54 SVVHELLWFLRGDSNVSYLHR---HGVSIWDEWADKDGELGPIYGVQWRS--WPDYDGNV 108 + + E W L G +++ +L + + D+ GV WR P N Sbjct: 67 AAIGETFWVLSGRNDIRFLSKVLPRAANFSDD------------GVTWRGAYGPRLYNN- 113 Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP-------------CHCLFQFYVD 155 Q+ S++ LR +P +R+ ++ ++ AL L C+ F + Sbjct: 114 -GQLDSVISRLRNNPNTRQAYLTIYDPALDSDEGLAAHSETGEAKTKDMICNLALLFSIT 172 Query: 156 NGKLSCQLYQRSGDVFLGIP-FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 G+L+ + RS DV G+ N +S+L +LA V+ + G + ++H YNN Sbjct: 173 EGRLNITVINRSQDVLWGMSSINFIEFSILQEVLAKVLNVEVGYYKLFSNNLHYYNNEVS 232 Query: 215 QADL-QLSRSPRTLPQM 230 + L +++ +T M Sbjct: 233 RKQLGGITKKTKTSSGM 249 >gi|110006223|gb|ABG48614.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pP] Length = 78 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + +Y+ +DQ+ +I+ ++ +P SRR ++ AWNV +D+ Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRILLCAWNVKDLDQ 78 >gi|322805078|emb|CBZ02638.1| thymidylate synthase [Clostridium botulinum H04402 065] Length = 196 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 5/135 (3%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW+L G +++ Y+ + ++ D G YG + S Y N I+Q + I++ Sbjct: 65 EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGYNKINQWNRIIK 121 Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + DP ++R + + N L K C FQF++ KL + R+ D + GI Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181 Query: 176 FNIASYSLLTMMLAS 190 ++ S++ + ++ Sbjct: 182 SDVFSFTFIQEFFSN 196 >gi|190702141|gb|ACE75860.1| putative thymidylate synthase-like protein [uncultured virus] Length = 59 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 5/56 (8%) Query: 88 GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 G+LGP+YG QWR++ N +DQI ++ ++ +P+ +V++WNV+ + KMAL Sbjct: 9 GDLGPVYGHQWRNF-----NGVDQIQQLINKIQDNPFRTDLMVNSWNVSDLPKMAL 59 >gi|108863587|gb|ABG22168.1| DHFR-TS [Haemoproteus lanii] Length = 70 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 8/54 (14%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 +LGPIYG QWR + DY +DQ+ +++ ++ DP SRR I+ AWN Sbjct: 14 DLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPTSRRIILCAWN 67 >gi|288931042|ref|YP_003435102.1| thymidylate synthase [Ferroglobus placidus DSM 10642] gi|288893290|gb|ADC64827.1| thymidylate synthase [Ferroglobus placidus DSM 10642] Length = 424 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 8/110 (7%) Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVS---AWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 D +DQ+ ++ LR +PY R V W++ D PPC +QF + K Sbjct: 300 DEKKVDQLYECIKKLRENPYRRDCYVGISRVWDLTSDD----PPCLRGYQF-LKTRKFMG 354 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 Y RS D++ + N+ ++SLLT ++ +I + ++ H D H+Y Sbjct: 355 IFYMRSNDIYGAMHANMYAFSLLTDYVSQLINEREYKYYHFSVDAHIYEE 404 >gi|134045244|ref|YP_001096730.1| thymidylate synthase [Methanococcus maripaludis C5] gi|132662869|gb|ABO34515.1| Thymidylate synthase [Methanococcus maripaludis C5] Length = 210 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 45/102 (44%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQI IV L+ SRR I WN + + PC + QF + + KL + RS D Sbjct: 100 DQIDYIVNKLKEQINSRRAIAITWNPYIDQTVKDVPCLQIVQFLIRDNKLYQTVLFRSND 159 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FL N L M+A + + ++ H +H+Y+ Sbjct: 160 AFLAFHANAIGLIALGEMVAEKLEIELAKYTHHSVSMHVYSE 201 >gi|21227339|ref|NP_633261.1| thymidylate synthase [Methanosarcina mazei Go1] gi|25091471|sp|Q8PXI1|TYSY_METMA RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|20905695|gb|AAM30933.1| Thymidylate synthase [Methanosarcina mazei Go1] Length = 217 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 4/124 (3%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + R+W +G V DQI +++ L+ P SRR W + K+ PC L F Sbjct: 91 YGQRLRNW---NGEV-DQIEYVIEKLKESPTSRRATAVTWIPPVDTKVNEVPCMILDDFK 146 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 + + K+ RS D P N+ S L +A +G + G H+Y++ + Sbjct: 147 IRDEKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAEKVGVEPGVITTVSISAHVYDHDW 206 Query: 214 EQAD 217 + + Sbjct: 207 DMVE 210 >gi|309790377|ref|ZP_07684942.1| thymidylate synthase [Oscillochloris trichoides DG6] gi|308227569|gb|EFO81232.1| thymidylate synthase [Oscillochloris trichoides DG6] Length = 484 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 12/169 (7%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + R+ +DG IDQ+++I LR+ SRR + WN A PPC L Q Sbjct: 258 YGARLRT---FDGQ-IDQVAAICADLRSAATSRRALAVLWNPHQDAGSANPPCLNLVQAR 313 Query: 154 VDNG------KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI-GFQYGEFIHTLGDV 206 + +L +Y RS D+F P N + L ++A + G + G+ Sbjct: 314 LRPAPGEATPRLFLTVYFRSHDIFRAWPANAYALRALQALIAEELGGVELGDLAILSHSA 373 Query: 207 HLYNNHFEQADLQLSRSPRTL-PQMIINPNIVDLLSFRYEDFTLRSYEP 254 H+Y + +E A L++ R P++I + ++ ++R Y P Sbjct: 374 HIYAHDWEAAAELLAQHYRPQNPRLIHDQRGAFVIVLEPPVISVRHYSP 422 >gi|49247538|gb|AAT58671.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT16] gi|49247540|gb|AAT58672.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT7] Length = 73 Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + DY +DQ+ +++ L+ DP +RR I+ AWN ++K Sbjct: 14 DLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVINLLKTDPTNRRIILCAWNPKDLEK 73 >gi|116754022|ref|YP_843140.1| thymidylate synthase [Methanosaeta thermophila PT] gi|116665473|gb|ABK14500.1| Thymidylate synthase [Methanosaeta thermophila PT] Length = 215 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 4/121 (3%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + RSW +G V DQI+ IV L+ +P +RR W + K PC + F Sbjct: 87 YGERLRSW---NGEV-DQIAEIVNRLKRNPRTRRATAVTWIPQVDHKREEVPCMVVCDFK 142 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 + + +L+ + RS D P N+ + S L ++ G G H+Y + + Sbjct: 143 IRSSRLNLTVMFRSHDFAGAYPANVYALSKLLHHVSRESGSVPGSLTTLSASAHIYEHDW 202 Query: 214 E 214 + Sbjct: 203 D 203 >gi|172035298|ref|YP_001801799.1| hypothetical protein cce_0382 [Cyanothece sp. ATCC 51142] gi|171696752|gb|ACB49733.1| hypothetical protein cce_0382 [Cyanothece sp. ATCC 51142] Length = 502 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 I D+ K+G + YG + RSW + D QI + L D S R ++S W+V Sbjct: 263 ILDDAPQKEG-VKYTYGQRLRSWFERD-----QIQQAIDKLITDKDSSRVVMSLWDVKDY 316 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI------ 192 + PPC + + +LS RS D+F P N L + I Sbjct: 317 ENNDSPPCLNHIWVRIVDNELSLTATFRSNDMFSAWPANAMGLRALQKHIIEQINKTSNH 376 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQAD 217 FQ+G I H+Y++ +E AD Sbjct: 377 NFQFGPLIIISQSAHIYSDCWEHAD 401 >gi|162135099|ref|YP_001595840.1| hypothetical protein [Pseudomonas phage YuA] gi|161513946|emb|CAO77772.1| hypothetical protein [Pseudomonas phage YuA] Length = 351 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW L G ++V Y+ R V ++D YG +WR DQ+ I+ Sbjct: 68 ESLWMLGGRNDVEYVARF-VDRMRSYSDDGLTFHGAYGFRWRQ-----HFFEDQLPKIIA 121 Query: 118 SLRADPYSRRHIVSAWNV-ALIDKMALP-PCH--CLFQFYVDNGKLSCQLYQRSGDVFLG 173 +L+A+ RR ++S W+ A + + PC+ +FQ D G+L + RS D+ G Sbjct: 122 ALKANRDDRRQVLSMWDADADLGRQGKDLPCNLQAIFQIACD-GRLDMTVTNRSNDLIWG 180 Query: 174 I-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 N +S L +A +G + G + + H Y Sbjct: 181 AYGANAVHFSYLHEYVARSVGVEQGIYRQVSANFHAYEE 219 >gi|312136483|ref|YP_004003820.1| thymidylate synthase, methanogen type [Methanothermus fervidus DSM 2088] gi|311224202|gb|ADP77058.1| thymidylate synthase, methanogen type [Methanothermus fervidus DSM 2088] Length = 223 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 19/178 (10%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGE-LGPIYGVQWRS 100 FP+ T K++ S+ + W RGD Y D++ KD + YG + R Sbjct: 55 FPISTNKEILL-SIPKDYYW--RGDKLSKYT--------DQFLKKDKKGFVYTYGNRLR- 102 Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 D +DQI +I++ L+ SRR W+ + K PC F + N KL Sbjct: 103 ----DHFSVDQIKAIIKRLKKCKKSRRATAVTWDPKIDFKNEEVPCMISIDFKIRNNKLH 158 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF-IHTLGDVHLYNNHFEQAD 217 RS D++ N A+ ++L ++ + + G IH++ H+Y F+ A+ Sbjct: 159 TTGIWRSHDIYQAWLPNAAALAILAKYISDKLNIKVGPLAIHSIS-AHIYEYCFDDAE 215 >gi|254516470|ref|ZP_05128529.1| putative thymidylate synthase [gamma proteobacterium NOR5-3] gi|219674893|gb|EED31260.1| putative thymidylate synthase [gamma proteobacterium NOR5-3] Length = 191 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 2/113 (1%) Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 YD N IDQ +V LR ++ +S L A PC C+ + NGKL+ Q Sbjct: 54 YDMNGIDQFDWMVGRLRNKSETKSAAISLLVPGL--NQANLPCLCVVDSKIRNGKLNLQF 111 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 + RS +VF N+ + + L LA+ +G G + H+Y E+A Sbjct: 112 FFRSQNVFGRQYANLVAIARLQEKLAASVGCDIGILKGYIASAHIYEYDLEEA 164 >gi|49247544|gb|AAT58674.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus majoris] Length = 78 Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + DY +DQ+ +++ ++ DP +RR I+ AWN ++K Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKNDPKNRRIILCAWNPKDLEK 78 >gi|49247536|gb|AAT58670.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT2] gi|49247542|gb|AAT58673.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT1] gi|86795021|gb|ABD15365.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT13] gi|86795023|gb|ABD15366.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT10] Length = 73 Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + DY +DQ+ +++ ++ DP +RR I+ AWN ++K Sbjct: 14 DLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVINLIKTDPTNRRIILCAWNPKDLEK 73 >gi|150402548|ref|YP_001329842.1| thymidylate synthase [Methanococcus maripaludis C7] gi|150033578|gb|ABR65691.1| thymidylate synthase [Methanococcus maripaludis C7] Length = 210 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 45/100 (45%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQI IV L+ SRR + WN + + PC + QF + + KL + RS D Sbjct: 100 DQIEYIVYKLKEQINSRRAVAITWNPYIDQTVKDVPCLQIVQFLIRDNKLYQTVLFRSND 159 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 FL N L ++A +G + ++ H +H+Y Sbjct: 160 AFLAFHANAIGLIALGELVAEKLGIELVKYTHHSVSMHVY 199 >gi|282899587|ref|ZP_06307551.1| hypothetical protein CRC_01035 [Cylindrospermopsis raciborskii CS-505] gi|281195466|gb|EFA70399.1| hypothetical protein CRC_01035 [Cylindrospermopsis raciborskii CS-505] Length = 510 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 15/156 (9%) Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 SYL + + D+ D++G + YG + RSW D QI ++ L DP S R + Sbjct: 255 SYLPEYISQVLDDAPDQEG-VKYTYGKRLRSWFGKD-----QIQQVIDKLINDPDSARAV 308 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 +S W+ A+ D+ PPC + + +LS RS D+F P N L + Sbjct: 309 MSLWD-AVKDEHDSPPCLNHIWVRIVDDQLSLTATFRSNDMFSAWPANGMGLRALQKYIY 367 Query: 190 SVI--------GFQYGEFIHTLGDVHLYNNHFEQAD 217 I Q G I H+Y+ +E A+ Sbjct: 368 DGIVRGSDIHQNLQLGPLITVSQSAHIYDECWEHAE 403 >gi|66391837|ref|YP_238762.1| gp42 dCMP hydroxymethylase [Aeromonas phage 31] gi|62114674|gb|AAX63522.1| gp42 dCMP hydroxymethylase [Aeromonas phage 31] Length = 231 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 22/213 (10%) Query: 13 KFGSDR--RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70 +F +D D+TGV T + D F L + EL W+L V Sbjct: 16 RFNNDEFVTDKTGVKTVEIAPVMFKADEPLIFGKLNNDYIE-----RELAWYLSQSRYVH 70 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 + +IW+ AD DG + YG W D +G+ Q ++++ L +DP +RR + Sbjct: 71 DIPGKTPAIWEAVADSDGRINSNYG--WAILSDENGS---QFANVLMHLASDPNTRRANM 125 Query: 131 SAWNVALIDK-----MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-----S 180 + + M+ C Q+ + +GKL+ ++ RS D G + A Sbjct: 126 IYTRPTMHEDYKAHGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDWAWQDYVL 185 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 L+ + + I + G+ + +H+Y HF Sbjct: 186 KRLVDKLQSREIMVEKGDIYWCVDSLHVYERHF 218 >gi|300087783|ref|YP_003758305.1| thymidylate synthase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527516|gb|ADJ25984.1| thymidylate synthase, putative [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 215 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 50/106 (47%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 QI+ +++ R + ++ +A PPC V GKL +Y RS D+ Sbjct: 103 QIAEVIRMYREEGFNTNQAFMTVGNPEAISLADPPCLRSVDTRVRYGKLHFVVYFRSWDL 162 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 + G P N+A+ LL +A IG + G+ I +HLY+ +E A Sbjct: 163 WAGFPSNLAALQLLKEYMAGEIGVEDGQIIAISKGLHLYDYSWEIA 208 >gi|108863579|gb|ABG22164.1| DHFR-TS [Haemoproteus pallidus] gi|108863581|gb|ABG22165.1| DHFR-TS [Haemoproteus pallidus] Length = 73 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + DY +DQ+ ++++ ++ DP +RR I+ AWN ++K Sbjct: 14 DLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIIICAWNPKDLEK 73 >gi|49247548|gb|AAT58676.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. WW1] Length = 78 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + DY +DQ+ ++++ ++ DP +RR I+ AWN ++K Sbjct: 19 DLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIILCAWNPKDLEK 78 >gi|67922327|ref|ZP_00515839.1| Thymidylate synthase [Crocosphaera watsonii WH 8501] gi|67855778|gb|EAM51025.1| Thymidylate synthase [Crocosphaera watsonii WH 8501] Length = 502 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 12/157 (7%) Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 I D+ K+G + YG + RSW + D QI + L +D S R ++S W+V Sbjct: 263 ILDDAPQKEG-VKYTYGQRLRSWFERD-----QIKQAIDKLISDKDSSRVVMSLWDVKDY 316 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI------ 192 + PPC + + +LS RS D+F P N L + + Sbjct: 317 ENNDSPPCLNHIWVRIVDDELSLTATFRSNDMFSAWPANAMGLRELQQHIIEEVNNKYQH 376 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 FQ G I H+Y++ +E AD + R + Q Sbjct: 377 NFQLGPLIIISQSAHIYSDCWEHADKVIETEYRRICQ 413 >gi|49247546|gb|AAT58675.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT3] gi|108863577|gb|ABG22163.1| DHFR-TS [Haemoproteus minutus] Length = 73 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 8/60 (13%) Query: 89 ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +LGPIYG QWR + DY +DQ+ ++++ ++ DP +RR I+ AWN ++K Sbjct: 14 DLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIILCAWNPKDLEK 73 >gi|149408287|ref|YP_001294566.1| hypothetical protein ORF058 [Pseudomonas phage M6] Length = 351 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 12/159 (7%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E LW L G ++V Y+ R V ++D YG +WR DQ+ I+ Sbjct: 68 ESLWMLGGRNDVEYVARF-VDRMRSYSDDGLTFHGAYGFRWRQ-----HFFEDQLPKIIA 121 Query: 118 SLRADPYSRRHIVSAWNV-ALIDKMALP-PCH--CLFQFYVDNGKLSCQLYQRSGDVFLG 173 +L+ + RR ++S W+ A + + PC+ +FQ D G+L + RS D+ G Sbjct: 122 ALKENRDDRRQVLSMWDADADLGRQGKDLPCNLQAIFQIACD-GRLDMTVTNRSNDLIWG 180 Query: 174 I-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 N +S L +A +G + G + + H Y Sbjct: 181 AYGANAVHFSYLHEYVARSVGVEQGIYRQVSANFHAYEE 219 >gi|303243613|ref|ZP_07329955.1| thymidylate synthase, methanogen type [Methanothermococcus okinawensis IH1] gi|302486174|gb|EFL49096.1| thymidylate synthase, methanogen type [Methanothermococcus okinawensis IH1] Length = 223 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 5/110 (4%) Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP-----PCHCLFQFYVDNGKL 159 + N I+QI I+ L+ P SRR + W + +++ PC QF + + KL Sbjct: 94 NNNEINQIEYIIDKLKEQPNSRRCVAITWQPDIDIEVSKKDYGSVPCLQFVQFLIRDNKL 153 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 + RS D+ + N L +A +G YG + H +H+Y Sbjct: 154 HQTVLFRSNDLMVAFVSNALGLIALGEKVAEEVGVDYGTYTHHSVSMHIY 203 >gi|308273673|emb|CBX30275.1| hypothetical protein N47_D30840 [uncultured Desulfobacterium sp.] Length = 220 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 50/113 (44%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 QI ++Q + D + + PPC + GKL +Y RS D+ Sbjct: 106 QIKEVIQMYKNDGHGTNQAYMTVGDPSTIYLGDPPCLRGIDTRIRYGKLHFMVYFRSWDL 165 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 + G P N+ + LL ++ IG Q GE I +HLY+ +E A L+ R+ Sbjct: 166 WNGFPANLGAIQLLKEYMSLEIGVQDGEIIAASKGLHLYDYIWELAKLRTLRT 218 >gi|73748623|ref|YP_307862.1| thymidylate synthase [Dehalococcoides sp. CBDB1] gi|147669382|ref|YP_001214200.1| thymidylate synthase-like protein [Dehalococcoides sp. BAV1] gi|289432648|ref|YP_003462521.1| thymidylate synthase [Dehalococcoides sp. GT] gi|73660339|emb|CAI82946.1| thymidylate synthase [Dehalococcoides sp. CBDB1] gi|146270330|gb|ABQ17322.1| Thymidylate synthase-like protein [Dehalococcoides sp. BAV1] gi|288946368|gb|ADC74065.1| thymidylate synthase, putative [Dehalococcoides sp. GT] Length = 217 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%) Query: 111 QISSIVQSLRADPY-SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 QI+ +++ R + + + ++ N +D + PPC V GKL +Y RS D Sbjct: 103 QIAKVIKMYRETGFNTNQAFMTVGNPETLD-LEDPPCLRSIDTRVRYGKLHFIIYFRSWD 161 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 ++ G P N+A+ LL +A+ IG + GE I +H+Y+ Sbjct: 162 LWAGFPSNLAAIQLLKEYMAAEIGVEDGEIIAMSKGMHIYD 202 >gi|109290020|ref|YP_656269.1| gp42 dCMP hydroxymethylase [Aeromonas phage 25] gi|104345693|gb|ABF72593.1| gp42 dCMP hydroxymethylase [Aeromonas phage 25] Length = 224 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 22/215 (10%) Query: 11 VIKFGSDR--RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN 68 V K+ S+ D++GV T + D L K++ + EL W+L Sbjct: 11 VSKYKSNEFVTDKSGVKTVEIAPVMFKADED-----LIFGKLNHDYIERELSWYLSQSRY 65 Query: 69 VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128 V+ + +IW+ AD +G + YG W + + +GN Q +++V+ L +PY+RR Sbjct: 66 VADIPGKTPAIWEAVADCNGMINSNYG--WAIFSEENGN---QFANVVKHLIENPYTRRA 120 Query: 129 IVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS- 182 + ++ + M+ C Q+ + +GKL+ ++ RS D G + A Sbjct: 121 NMIYTRPSMHTDYNANGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDWAWQDY 180 Query: 183 ----LLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 L+ + + I + G+ +H+Y HF Sbjct: 181 VLSRLVDTLQSHEIMVEKGDIYWCADSLHVYKRHF 215 >gi|310722439|ref|YP_003969263.1| dCMP hydroxymethylase [Aeromonas phage phiAS4] gi|306021282|gb|ADM79817.1| dCMP hydroxymethylase [Aeromonas phage phiAS4] Length = 227 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 22/215 (10%) Query: 11 VIKFGSDR--RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN 68 V K+ S+ D++GV T + D L K++ + EL W+L Sbjct: 14 VSKYKSNEFVTDKSGVKTVEIAPVMFKADED-----LIFGKLNHDYIERELSWYLSQSRY 68 Query: 69 VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128 V+ + +IW+ AD +G + YG W + + +GN Q +++V+ L +PY+RR Sbjct: 69 VADIPGKTPAIWEAVADCNGMINSNYG--WAIFSEENGN---QFANVVKHLIENPYTRRA 123 Query: 129 IVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS- 182 + ++ + M+ C Q+ + +GKL+ ++ RS D G + A Sbjct: 124 NMIYTRPSMHTDYNANGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDWAWQDY 183 Query: 183 ----LLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 L+ + + I + G+ +H+Y HF Sbjct: 184 VLSRLVDTLQSHEIMVEKGDIYWCADSLHVYERHF 218 >gi|304314929|ref|YP_003850076.1| thymidylate synthase [Methanothermobacter marburgensis str. Marburg] gi|1717846|sp|P80305|TYSY_METTM RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|2127679|pir||S62192 probable thymidylate synthase (EC 2.1.1.45) - Methanobacterium thermoautotrophicum (strain Marburg) gi|1103708|emb|CAA63063.1| deoxyuridylate hydroxymethylase (TysY) [Methanothermobacter thermautotrophicus] gi|302588388|gb|ADL58763.1| thymidylate synthase [Methanothermobacter marburgensis str. Marburg] Length = 223 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +DQ+ ++ L+ SRR + W+ + + PC L F V G+L RS Sbjct: 109 VDQVDRAIERLKNCKESRRATMVTWDPKIDTESDEVPCMILVDFKVREGRLFTTALWRSH 168 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEF-IHTLGDVHLYNNHFEQA 216 D++ N + L +AS +G + G IH++ H+Y +F++A Sbjct: 169 DIYGAWFPNAVGLAYLADHVASEVGVEVGHITIHSIS-AHIYEVNFKEA 216 >gi|218781981|ref|YP_002433299.1| thymidylate synthase-like protein [Desulfatibacillum alkenivorans AK-01] gi|218763365|gb|ACL05831.1| thymidylate synthase-like protein [Desulfatibacillum alkenivorans AK-01] Length = 263 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 39/201 (19%) Query: 25 GTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWA 84 G T+G ++ G P+ K W++ E++ F D V Y Sbjct: 100 GESYTYGERL-----TGAPITGDKLDWWQAQNKEIIDFREPDGKVVY------------- 141 Query: 85 DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL- 143 +KDG+L ++QI I+Q+ + + R+ VA + L Sbjct: 142 EKDGQL-----------------YLNQIEWIIQTYKN--FGHRNNQMVLQVAHPSDLTLL 182 Query: 144 -PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 PPC + +G L +Y RS D++ G+P N+A L +A+ IG + GE + Sbjct: 183 DPPCLRSIDTRIQDGTLHFFVYFRSWDLWGGLPANLAGIQNLKEYMANEIGVKDGEMVVE 242 Query: 203 LGDVHLYNNHFEQADLQLSRS 223 +HLY + A L+ R Sbjct: 243 SKGLHLYGYAEDLAKLRCLRD 263 >gi|168804053|ref|YP_001686984.1| thymidylate synthase [Glossina pallidipes salivary gland hypertrophy virus] gi|146164240|gb|ABQ08809.1| thymidylate synthase [Glossina pallidipes salivary gland hypertrophy virus] Length = 115 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 6/68 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60 ++Y L+ ++I+ G + V FG Q+ +DL +K FPL +K+ W V+ ELL Sbjct: 21 NKYPTLVNNIIEHGISTEKKISV-----FGAQLEYDLRNKKFPLFISKRYDWAYVIEELL 75 Query: 61 WFLRGDSN 68 W +RG+++ Sbjct: 76 WCIRGETD 83 >gi|284929672|ref|YP_003422194.1| thymidylate synthase [cyanobacterium UCYN-A] gi|284810116|gb|ADB95813.1| thymidylate synthase [cyanobacterium UCYN-A] Length = 504 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 I D+ + ++G + YG + RSW D QI ++ L +D S R ++S W+V Sbjct: 263 ILDDSSQREG-IKYTYGQRLRSWFKKD-----QIQQVIDLLVSDINSSRAVMSLWDVNDY 316 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI------ 192 D PPC + +LS RS D+F P N L + + I Sbjct: 317 DNNDSPPCLNHIWIRTIDDELSLTATFRSNDMFSAWPSNAMGLRALQIHIMREIQNRINQ 376 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQAD 217 + G + H+YN+ +E AD Sbjct: 377 KLKIGPLVTVSQSAHIYNDCWEYAD 401 >gi|240276636|gb|EER40147.1| thymidylate synthase [Ajellomyces capsulatus H143] Length = 65 Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 7/67 (10%) Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN-----IVDLLSFRYEDFTLRSYEPHAA 257 +GD H+Y +H E QL+R P P++II + I+D ++ E+F + Y+PH Sbjct: 1 MGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMD--GWKEEEFEVVGYKPHKG 58 Query: 258 ILAKVSV 264 I K+SV Sbjct: 59 IKMKMSV 65 >gi|57234449|ref|YP_181546.1| thymidylate synthase, putative [Dehalococcoides ethenogenes 195] gi|57224897|gb|AAW39954.1| thymidylate synthase, putative [Dehalococcoides ethenogenes 195] Length = 217 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%) Query: 111 QISSIVQSLRADPY-SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 QI+ +++ R + + + ++ N +D + PPC + GKL +Y RS D Sbjct: 103 QIAKVIKMYRDTGFNTNQAFMTVGNPETLD-LEDPPCLRSIDTRIRYGKLHFVIYFRSWD 161 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 ++ G P N+A+ +L +A+ IG + GE I +H+Y+ Sbjct: 162 LWAGFPSNLAAIQMLKEYMAAEIGVEDGEIIAMSKGMHIYD 202 >gi|261403513|ref|YP_003247737.1| thymidylate synthase, methanogen type [Methanocaldococcus vulcanius M7] gi|261370506|gb|ACX73255.1| thymidylate synthase, methanogen type [Methanocaldococcus vulcanius M7] Length = 221 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 5/119 (4%) Query: 94 YGVQWRSWPDYDGNVI-DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC--HCLF 150 Y + R +P YD V DQI +++ L ++ SRR +VS WN + + PC H F Sbjct: 85 YFERIREYPSYDRKVKNDQIKYVIEKLNSNSTSRRAVVSLWNPFIDQDVKDVPCLQHIGF 144 Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 Q N +S RS D+ L N L +A + H + + H+Y Sbjct: 145 QKREKNLHMSVLF--RSNDILLAFHSNALGLIKLGEYVAEKTNSTLKTYTHFIYNAHIY 201 >gi|270308125|ref|YP_003330183.1| thymidylate synthase [Dehalococcoides sp. VS] gi|270154017|gb|ACZ61855.1| thymidylate synthase [Dehalococcoides sp. VS] Length = 217 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%) Query: 111 QISSIVQSLRADPY-SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 QI+ +++ + + + + ++ N +D + PPC V GKL +Y RS D Sbjct: 103 QIAKVIKMYKETGFNTNQAFMTVGNPETLD-LEDPPCLRSIDTRVRYGKLHFIIYFRSWD 161 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 ++ G P N+A+ +L +A+ IG + GE I +H+Y+ Sbjct: 162 LWAGFPSNLAAIQMLKEYMAAEIGVEDGEIIAMSKGMHIYD 202 >gi|294495255|ref|YP_003541748.1| thymidylate synthase [Methanohalophilus mahii DSM 5219] gi|292666254|gb|ADE36103.1| thymidylate synthase, methanogen type [Methanohalophilus mahii DSM 5219] Length = 217 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 4/124 (3%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + R+W + +DQIS ++ L+ +RR W + ++ PC L F Sbjct: 91 YGQRLRNWDER----VDQISYVIDKLKNSKTTRRATAVTWIPYIDTEVDEVPCMILDDFK 146 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V N ++ RS D P N+ S L +A G+ G H+Y + + Sbjct: 147 VRNNQVHMTTLFRSHDFAGAYPANLYGLSQLLKYVAQNAGYDTGTITTISVSAHIYEHDW 206 Query: 214 EQAD 217 ++ + Sbjct: 207 DRIE 210 >gi|91773067|ref|YP_565759.1| thymidylate synthase [Methanococcoides burtonii DSM 6242] gi|121686818|sp|Q12X17|TYSY_METBU RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|91712082|gb|ABE52009.1| Thymidylate synthase [Methanococcoides burtonii DSM 6242] Length = 217 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 4/122 (3%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + R+W DG V DQI +++ L + +RR W + K+ PC + F Sbjct: 91 YGQRLRNW---DGKV-DQIEYVIEKLTNNKTTRRATAVTWVPTIDTKVDEVPCMIIDDFK 146 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 + + + RS D P N+ S L +A +G G H+Y++ + Sbjct: 147 IRDDTVHLTTLFRSHDFAGAYPANLYGLSKLLEYVADKVGLAPGTITTMSVSAHIYDHDW 206 Query: 214 EQ 215 ++ Sbjct: 207 DK 208 >gi|311993033|ref|YP_004009899.1| gp42 dCMP hydroxymethylase [Enterobacteria phage CC31] gi|284177871|gb|ADB81537.1| gp42 dCMP hydroxymethylase [Enterobacteria phage CC31] Length = 245 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 16/179 (8%) Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI 109 V+ + V EL W+ V + +IW++ + GE+ YG W + Sbjct: 52 VNQEYVERELAWYKSKSLFVKDIPGGTPAIWEQVSSSKGEINSNYG-----WAIWSAENY 106 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSCQLY 164 +Q S L P SRR I+ ++ D M+ C Q+ + +G+++ + Sbjct: 107 NQFSFCATELIEKPDSRRAIMIYTRPSMQVDFERDGMSDFMCTNTVQYLIRDGRVNAIVN 166 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVI----GFQY--GEFIHTLGDVHLYNNHFEQAD 217 RS DV G + A + L + G +Y G+ I G +H+Y HF D Sbjct: 167 MRSNDVVFGFRNDYAWQKYVLESLVETVNAGSGEKYVPGDIIWNAGSLHVYERHFYLVD 225 >gi|169835571|ref|ZP_02868759.1| thymidylate synthase [candidate division TM7 single-cell isolate TM7a] Length = 61 Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 T+ D H+Y NH E QL+R P L ++ I + L+F ED TL YE + AI + Sbjct: 1 TIIDAHIYENHIEGLKEQLTRKPLKLAKIKIADKPFNELTF--EDITLEDYESYPAIKFE 58 Query: 262 VSV 264 V+V Sbjct: 59 VAV 61 >gi|118789|sp|P18030|DCHM_BPT6 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase; Short=Deoxycytidylate hydroxymethylase; AltName: Full=dCMP hydroxymethylase; Short=dCMP HMase Length = 246 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193 D M+ C Q+ + + K++ + RS DV G + A + L S + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDPTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|254490282|ref|ZP_05103471.1| hypothetical protein MDMS009_614 [Methylophaga thiooxidans DMS010] gi|224464415|gb|EEF80675.1| hypothetical protein MDMS009_614 [Methylophaga thiooxydans DMS010] Length = 82 Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSFR--- 243 +A + G + G+ H + + H+Y + E D+QL R P P++ INP I L Sbjct: 1 MAQISGLKPGKAYHKIANAHIYEDQLELMRDVQLKREPFASPKLHINPEIKSLSDLETWV 60 Query: 244 -YEDFTLRSYEPHAAILAKVSV 264 DF + Y+ H I SV Sbjct: 61 TLADFEVEGYQSHEPIAYPFSV 82 >gi|150401473|ref|YP_001325239.1| thymidylate synthase [Methanococcus aeolicus Nankai-3] gi|150014176|gb|ABR56627.1| thymidylate synthase [Methanococcus aeolicus Nankai-3] Length = 222 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 5/106 (4%) Query: 109 IDQISSIVQSLRADPYSRRHIVSAW----NVALIDK-MALPPCHCLFQFYVDNGKLSCQL 163 I+QI IV+ L+ SRR + W ++ + +K PC QF + + KL + Sbjct: 97 INQIDFIVEKLKEQQNSRRCVAITWQPNIDIEVSNKDHGSVPCLQFVQFLIRDNKLYQTV 156 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 RS D+ + N L M+A +G YG + H +H+Y Sbjct: 157 LFRSNDLAVAFVSNALGLIALGEMVAEKVGVDYGTYTHHSVSMHIY 202 >gi|9632636|ref|NP_049659.1| gp42 dCMP hydroxymethylase [Enterobacteria phage T4] gi|118788|sp|P08773|DCHM_BPT4 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase; Short=Deoxycytidylate hydroxymethylase; AltName: Full=dCMP hydroxymethylase; Short=dCMP HMase gi|4389322|pdb|1B5D|A Chain A, Dcmp Hydroxymethylase From T4 (Intact) gi|4389324|pdb|1B5E|A Chain A, Dcmp Hydroxymethylase From T4 gi|4389360|pdb|1B49|A Chain A, Dcmp Hydroxymethylase From T4 (Phosphate-Bound) gi|4389361|pdb|1B49|C Chain C, Dcmp Hydroxymethylase From T4 (Phosphate-Bound) gi|6729700|pdb|1B5D|B Chain B, Dcmp Hydroxymethylase From T4 (Intact) gi|6729701|pdb|1B5E|B Chain B, Dcmp Hydroxymethylase From T4 gi|5354260|gb|AAD42467.1|AF158101_54 gp42 dCMP hydroxymethylase [Enterobacteria phage T4] gi|15312|emb|CAA68342.1| unnamed protein product [Enterobacteria phage T4] gi|215843|gb|AAA21709.1| deoxycytidylate hydroxymethylase [Enterobacteria phage T4] gi|299780399|gb|ADJ39761.1| dCMP hydroxymethylase [Enterobacteria phage T4T] Length = 246 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193 D M+ C Q+ + + K++ + RS DV G + A + L S + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|32453532|ref|NP_861738.1| RB69ORF048c hypothetical protein [Enterobacteria phage RB69] gi|32350351|gb|AAP75950.1| RB69ORF048c hypothetical protein [Enterobacteria phage RB69] Length = 238 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 5/116 (4%) Query: 104 YDGNVIDQISSIVQSLRADPYSRR---HIVSAWNVALID--KMALPPCHCLFQFYVDNGK 158 Y + Q+ ++++ L+ P SRR I+ + + AL+D + PC +Y+ +GK Sbjct: 116 YGPRIAAQLPALLKELKEKPNSRRVVFQILESSDQALLDSDETLEYPCTDSVTYYIRDGK 175 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 L + RS + + + + L +A+ G + G++ HT+ H++ F+ Sbjct: 176 LYTHCHMRSQNCAVVMQLDFYLQGKLLHYIANECGVEVGDYTHTMVSAHVFERDFD 231 >gi|118787|sp|P18029|DCHM_BPT2 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase; Short=Deoxycytidylate hydroxymethylase; AltName: Full=dCMP hydroxymethylase Length = 246 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193 D M+ C Q+ + + K++ + RS DV G + A + L S + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|330858570|ref|YP_004414945.1| putative dCMP hydroxymethylase [Shigella phage Shfl2] gi|327397504|gb|AEA73006.1| putative dCMP hydroxymethylase [Shigella phage Shfl2] Length = 246 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 22/206 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSQSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193 D M+ C Q+ + + K++ + RS DV G + A + L S + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 194 ------FQYGEFIHTLGDVHLYNNHF 213 ++ G I +G +H+Y+ HF Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHF 222 >gi|291290258|dbj|BAI83053.1| dCMP hydroxymethylase [Enterobacteria phage AR1] Length = 246 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193 D M+ C Q+ + + K++ + RS DV G + A + L S + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|228860976|ref|YP_002853999.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB51] gi|227438650|gb|ACP30962.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB51] Length = 246 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193 D M+ C Q+ + + K++ + RS DV G + A + L S + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSSRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|116326264|ref|YP_802984.1| dCMP hydroxymethylase [Enterobacteria phage RB32] gi|115343857|gb|ABI94866.1| dCMP hydroxymethylase [Enterobacteria phage RB32] Length = 246 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSQSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193 D M+ C Q+ + + K++ + RS DV G + A + L S + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|6686334|sp|O26868|TYSY_METTH RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase Length = 222 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 2/110 (1%) Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +DQ+ ++ L+ SRR + W+ PC L F + +G+L RS Sbjct: 109 VDQLDEAIRRLKNCTESRRATMVTWDPPEDTASDEVPCMILVDFKIRDGRLFTTALWRSH 168 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEF-IHTLGDVHLYNNHFEQAD 217 D++ N + L +A+ +G + G IH++ H+Y +F++A+ Sbjct: 169 DIYGAWFPNAVGLAYLADHVAAEVGVEVGHITIHSIS-AHIYEVNFKEAE 217 >gi|228861357|ref|YP_002854378.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB14] gi|227438373|gb|ACP30686.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB14] Length = 246 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193 D M+ C Q+ + + K++ + RS DV G + A + L S + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|15678799|ref|NP_275916.1| thymidylate synthase [Methanothermobacter thermautotrophicus str. Delta H] gi|2621865|gb|AAB85277.1| thymidylate synthase [Methanothermobacter thermautotrophicus str. Delta H] Length = 227 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 2/110 (1%) Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +DQ+ ++ L+ SRR + W+ PC L F + +G+L RS Sbjct: 114 VDQLDEAIRRLKNCTESRRATMVTWDPPEDTASDEVPCMILVDFKIRDGRLFTTALWRSH 173 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEF-IHTLGDVHLYNNHFEQAD 217 D++ N + L +A+ +G + G IH++ H+Y +F++A+ Sbjct: 174 DIYGAWFPNAVGLAYLADHVAAEVGVEVGHITIHSIS-AHIYEVNFKEAE 222 >gi|218437721|ref|YP_002376050.1| thymidylate synthase [Cyanothece sp. PCC 7424] gi|218170449|gb|ACK69182.1| thymidylate synthase [Cyanothece sp. PCC 7424] Length = 512 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 11/130 (8%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + RSW D QI +++ L D S R ++S W+V + PPC Sbjct: 277 YGKRLRSWFKQD-----QIEQVIKKLTLDINSSRAVMSLWDVHDHEGNDNPPCLNHIWLR 331 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG------FQYGEFIHTLGDVH 207 V +LS RS D+F P N L + I + G I H Sbjct: 332 VVENELSLTATFRSNDMFSAWPANAMGLRALQQHILDNINQRASYSLKMGPLITVSQSAH 391 Query: 208 LYNNHFEQAD 217 +Y++ +E AD Sbjct: 392 IYSDCWEYAD 401 >gi|297619495|ref|YP_003707600.1| thymidylate synthase, methanogen type [Methanococcus voltae A3] gi|297378472|gb|ADI36627.1| thymidylate synthase, methanogen type [Methanococcus voltae A3] Length = 213 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 7/179 (3%) Query: 38 LSKGFPLLTTKKVHWKSVVHELLWFL---RGDSNVSY-LHRHGVSIWDEWADKDGELGPI 93 LS+G + T K +++ ++ GD + Y L + + + + Sbjct: 21 LSEGIDMTTEDGQKCKEIMNTVIEITDPSNGDVSSKYPLGENAIKSYTNQLVNGCNTEFV 80 Query: 94 YGVQWR--SWPDYDGN-VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150 Y R +P+ D DQI IV L + SRR I WN + ++ PC Sbjct: 81 YDYHERIFEYPNQDKTEKFDQIDYIVGKLSENHSSRRAIAITWNPYIDTQVKDVPCLQFI 140 Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 +F V N +L + RS D +L N L +A + ++ H +H+Y Sbjct: 141 EFLVRNDELYMTVLFRSNDAYLAFHANALGLIALGQTVAEKLNIPLKKYTHHSVSMHVY 199 >gi|291457829|ref|ZP_06597219.1| thymidylate synthase [Bifidobacterium breve DSM 20213] gi|291380554|gb|EFE88072.1| thymidylate synthase [Bifidobacterium breve DSM 20213] Length = 41 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 16/33 (48%), Positives = 24/33 (72%) Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCH 147 ++ ++ +P RR I+SAWN + + KMALPPCH Sbjct: 3 VIDKIKNNPDDRRIILSAWNPSDLKKMALPPCH 35 >gi|289191763|ref|YP_003457704.1| thymidylate synthase, methanogen type [Methanocaldococcus sp. FS406-22] gi|288938213|gb|ADC68968.1| thymidylate synthase, methanogen type [Methanocaldococcus sp. FS406-22] Length = 222 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 5/111 (4%) Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGK 158 Y I+QI+ I++ L SRR + WN + D+ PC L QF + + Sbjct: 92 YANEKINQINYIIEKLNQQKNSRRAVAITWNPKIDIDISRDERGSVPCLQLLQFLIRDDN 151 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 L + RS D + N L ++A + E++H +H+Y Sbjct: 152 LYMTVVFRSNDALIAFVANALGLISLGELVAEKTNTKLKEYVHHSISMHVY 202 >gi|325959916|ref|YP_004291382.1| thymidylate synthase [Methanobacterium sp. AL-21] gi|325331348|gb|ADZ10410.1| thymidylate synthase, methanogen type [Methanobacterium sp. AL-21] Length = 205 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 2/109 (1%) Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 IDQI V L SRR I W+ + + PC L F + +G+L RS Sbjct: 95 IDQIQEAVMRLNNFKESRRAISITWDPLVDTQNDEVPCMMLVDFKIRDGELHTTGLWRSH 154 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEF-IHTLGDVHLYNNHFEQA 216 D++ N S L +A G + G IH++ H+Y +F++A Sbjct: 155 DIYGAWFPNAVGLSNLAKYVAEETGSKLGTLTIHSI-SAHIYEVNFKEA 202 >gi|193211965|ref|YP_001997918.1| thymidylate synthase [Chlorobaculum parvum NCIB 8327] gi|193085442|gb|ACF10718.1| thymidylate synthase [Chlorobaculum parvum NCIB 8327] Length = 343 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 34/211 (16%) Query: 44 LLTTKKVHWKSVV--HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGE-LGPIYGVQWRS 100 L+T + W ++ E LW G +++ ++ H + ++D DGE L YG + R Sbjct: 52 LVTVPERRWNPILPFAESLWLATGKNDLEFIG-HYLKNMKNFSD-DGEFLRGGYGPRLRK 109 Query: 101 W----PDY-------------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVA--LIDKM 141 + DY + + +DQ I +S D ++R+ I++ + DK Sbjct: 110 YNGINDDYKIRNTYDIDIAKLNKSEVDQFGFICKSFEKDKFTRQAIINIGDPPKDCFDKK 169 Query: 142 ALP------PCHCL--FQFYVDNGKLSCQLYQRSGDVFLGI-PFNIASYSLLTMMLASVI 192 PC L FQ KL+ +Y RS D G NI +++ + + ++ Sbjct: 170 GNLKITKDFPCTRLLHFQKQPKANKLNLTVYMRSNDFVWGASAVNIFNFTFMLEYFSQIL 229 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 + GE+ H + H Y FE +SR+ Sbjct: 230 DLEIGEYYHIANNFHYY-EEFEDLVQSISRT 259 >gi|66392082|ref|YP_239304.1| putative thymidylate synthase [Xanthomonas phage Xp15] gi|62529192|gb|AAX84875.1| putative thymidylate synthase [Xanthomonas phage Xp15] Length = 273 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 22/170 (12%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E+ W L + +H +W+ + DG YG W G + + +++ Sbjct: 64 EMRWKLGASKFDDSIKQHA-KMWESVQNPDGTFNSNYGQFWF------GQQMGVMKVVME 116 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPP-----CHCLFQFYVDNGKLSCQLYQRSGDVFL 172 +R D SRR I+ L D P C F++ + L ++ RS D Sbjct: 117 LIR-DQDSRRAIIPM----LTDDHLSPETVDTVCTEAVSFHIRHNTLYTSVHMRSSDQIF 171 Query: 173 GIPFNIASYSLLT-----MMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 G+ +I ++S+LT ++ A+ Q G T H+Y H+ D Sbjct: 172 GLGTDIPTFSVLTHLVHGLLQANYPSLQVGSMTITAASSHIYERHYRMVD 221 >gi|307150936|ref|YP_003886320.1| thymidylate synthase [Cyanothece sp. PCC 7822] gi|306981164|gb|ADN13045.1| thymidylate synthase [Cyanothece sp. PCC 7822] Length = 505 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 11/130 (8%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + RSW D QI ++ L A+ S R ++S W+V + PPC Sbjct: 277 YGQRLRSWFGRD-----QIEQAIEKLAAEKDSSRVVMSLWDVEDYENNDSPPCLNHIWLR 331 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM-MLASVI-----GFQYGEFIHTLGDVH 207 + + +LS RS D+F P N L +L ++I + G I H Sbjct: 332 IVDNELSLTATFRSNDMFSAWPANAMGLRALQQHILDNIIQKSDDSLKMGSLIIVSQSAH 391 Query: 208 LYNNHFEQAD 217 +Y++ +E A+ Sbjct: 392 IYSDCWEYAE 401 >gi|119719856|ref|YP_920351.1| thymidylate synthase-like [Thermofilum pendens Hrk 5] gi|119524976|gb|ABL78348.1| Thymidylate synthase-like protein [Thermofilum pendens Hrk 5] Length = 460 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 4/101 (3%) Query: 87 DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 +GE G +Y R + DQ+ IV+ L + P +RR I W+ A PPC Sbjct: 233 EGEEGAVYSYGDRLRRHREAG--DQVRRIVERLASSPDTRRAIALTWDFATDTNSQDPPC 290 Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 Q + + + RS D + P N +Y LL +M Sbjct: 291 LVAVQGDLSGDTYNQVAFFRSHDAYAAWPLN--AYGLLALM 329 >gi|899339|emb|CAA32651.1| thymidylate synthase (exons 5-7) [Mus musculus] Length = 30 Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 17/30 (56%), Positives = 21/30 (70%) Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 1 GLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 30 >gi|257059146|ref|YP_003137034.1| thymidylate synthase [Cyanothece sp. PCC 8802] gi|256589312|gb|ACV00199.1| thymidylate synthase [Cyanothece sp. PCC 8802] Length = 508 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 11/130 (8%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + RSW D QI +Q L + S R ++S W+V D PPC Sbjct: 277 YGQRLRSWFGRD-----QIEQAIQKLVIEKDSSRVVMSLWDVRDYDNNDSPPCLNHIWLR 331 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI------GFQYGEFIHTLGDVH 207 + N +LS RS D+F N L + I + G I H Sbjct: 332 IVNDELSLTATFRSNDMFSAWVANAMGLRALQQHILDNIVSKADYNLKMGPLITVSQSAH 391 Query: 208 LYNNHFEQAD 217 +Y++ +E AD Sbjct: 392 IYSDCWEHAD 401 >gi|282599167|ref|YP_003359084.1| deoxyuridylate hydroxymethyltransferase [Deftia phage phiW-14] gi|257219237|gb|ACV50252.1| deoxyuridylate hydroxymethyltransferase [Deftia phage phiW-14] Length = 357 Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust. Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 22/196 (11%) Query: 45 LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY 104 L +K + +V E W + G N+ + +++D G+ W Sbjct: 57 LNGRKSNIFQMVAETFWVMSGSGNIKEFLEFFLPRAPQYSDD--------GINWHGAYGP 108 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP------------PCHCLFQF 152 +Q+ S + L D +RR V + L A+ PC+ Sbjct: 109 RMYAHNQLQSAIDLLIKDKDTRRAYVMIADPTLDSAPAIEAAYGVGHSPKDVPCNREIHI 168 Query: 153 YVDNGKLSCQLYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 + KL ++ QRSGD+ G N ++ L +L+ G+ G++ + D H Y Sbjct: 169 NIIEDKLCMKVIQRSGDMLFGTGSINPFEFTFLQELLSEATGYALGDYQWDVTDAHYY-K 227 Query: 212 HFEQADLQLSRSPRTL 227 FE + RS +T Sbjct: 228 AFEDQVNDVLRSEQTF 243 >gi|218246096|ref|YP_002371467.1| thymidylate synthase [Cyanothece sp. PCC 8801] gi|218166574|gb|ACK65311.1| thymidylate synthase [Cyanothece sp. PCC 8801] Length = 497 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 13/158 (8%) Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 S+L + I D+ +G + YG + RSW D QI ++ L + + + Sbjct: 255 SFLQEYIPQILDDAPYTEG-VKYTYGQRLRSWFKRD-----QIEQVINKLIGEIDAASGV 308 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 +S W+V DK P + ++ VDN +LS RS D+F P N L + Sbjct: 309 MSLWDVNDHDKGGSPCLNHIWVRVVDN-ELSLTATLRSNDMFAAWPANAMGLRALQQHIR 367 Query: 190 SVIG------FQYGEFIHTLGDVHLYNNHFEQADLQLS 221 I Q G I H+Y++ +E D +S Sbjct: 368 DAIAKRSDYNLQMGPLITISQSAHIYDDTWENVDKLIS 405 >gi|2160415|dbj|BAA00404.1| thymidylate synthase [Homo sapiens] Length = 68 Score = 41.6 bits (96), Expect = 0.100, Method: Composition-based stats. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL 38 QYL ++H+++ G + DRTG GT S FG Q R+ L Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSL 67 >gi|256810378|ref|YP_003127747.1| thymidylate synthase, methanogen type [Methanocaldococcus fervens AG86] gi|256793578|gb|ACV24247.1| thymidylate synthase, methanogen type [Methanocaldococcus fervens AG86] Length = 222 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 5/111 (4%) Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGK 158 Y+ I+QI I++ L SRR I WN + D+ PC +F V + Sbjct: 92 YNEERINQIDYIIEKLNQQKNSRRAIAITWNPKIDIEVSKDERGSVPCLQFIEFLVRDNN 151 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 L + RS D L N L +A Q ++H +H+Y Sbjct: 152 LHMTVVFRSNDALLAYVANALGLISLGEYIAEKTNTQLKSYVHHSVSMHVY 202 >gi|327314456|ref|YP_004329893.1| thymidylate synthase [Prevotella denticola F0289] gi|326946285|gb|AEA22170.1| thymidylate synthase [Prevotella denticola F0289] Length = 332 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 39/193 (20%), Positives = 86/193 (44%), Gaps = 26/193 (13%) Query: 44 LLTTKKVHWKS--VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW 101 ++T + W + E LW G ++++Y++ +G ++ +++D + YG + R + Sbjct: 52 MITIAERQWYAPLAYAESLWIATGRNDMNYINLYGRNL-KKFSDNGETMRGAYGPRLRHY 110 Query: 102 P----DYD--------GNVIDQISSIVQSLRADPYSRRHIVSAWNVAL----IDK----M 141 DY+ N +DQ ++ + D +R+ +++ + ID+ Sbjct: 111 NGDECDYNIHEIYDELPNEVDQFRYVIDCFKKDINTRQAVINIGDPVKDCFGIDRNLKVT 170 Query: 142 ALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGE 198 PC + F D KL+ + RS D+ G NI +++ + A+++G + G Sbjct: 171 KDIPCTRMLHFMKDANANKLNLIVSMRSNDLIWGASAVNIFNFTWMQEYFAAILGMEIGS 230 Query: 199 FIHTLGDVHLYNN 211 + H ++H Y + Sbjct: 231 YYHIADNLHYYED 243 >gi|148927227|ref|ZP_01810800.1| Thymidylate synthase-like protein [candidate division TM7 genomosp. GTL1] gi|147887358|gb|EDK72809.1| Thymidylate synthase-like protein [candidate division TM7 genomosp. GTL1] Length = 208 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 42/99 (42%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 QI ++ L +S W+ + + PC + + +GKL ++ S DV Sbjct: 96 QIEFLISKLDPQSPKGEAQISMWDKNIDQDQKVSPCTQIIWARIKHGKLELHVHAHSSDV 155 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 + + NI + L +A +G G++ H L HL+ Sbjct: 156 YKKLLMNILEFVSLQHYIAERVGVPVGKYYHFLDSGHLH 194 >gi|329847890|ref|ZP_08262918.1| thymidylate synthase protein [Asticcacaulis biprosthecum C19] gi|328842953|gb|EGF92522.1| thymidylate synthase protein [Asticcacaulis biprosthecum C19] Length = 166 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 30/47 (63%) Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 RS D +LG+P +I +++L ++A + + G + H++G +HLY + Sbjct: 2 RSNDAYLGLPHDIFCFTMLQELIAGSLSAKLGTYKHSVGSLHLYTEN 48 >gi|77407171|ref|ZP_00784156.1| thymidylate synthase [Streptococcus agalactiae H36B] gi|77174220|gb|EAO77104.1| thymidylate synthase [Streptococcus agalactiae H36B] Length = 134 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Query: 31 GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN--VSYLHRHGVSIWDEW-ADK 86 G +DLSKG FP+ T + + KS + E+ W + +N V ++GV+ W++W Sbjct: 42 GAFAEYDLSKGEFPITTLRPIPIKSAIKEIFWIYQDQTNDLVVLNDKYGVTYWNDWEVGH 101 Query: 87 DGELGPIYGV 96 G +G YG Sbjct: 102 TGTIGQRYGA 111 >gi|254483604|ref|ZP_05096827.1| hypothetical protein GPB2148_2750 [marine gamma proteobacterium HTCC2148] gi|214036113|gb|EEB76797.1| hypothetical protein GPB2148_2750 [marine gamma proteobacterium HTCC2148] Length = 49 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 26/46 (56%) Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QLSR PR LP+M I + + +EDF L Y PH I A V+V Sbjct: 4 QLSREPRALPRMNILRRPDSIYDYCFEDFELVDYNPHGHISAPVAV 49 >gi|167948528|ref|ZP_02535602.1| thymidylate synthase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 31 Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 17/31 (54%), Positives = 21/31 (67%) Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + DL +FRYEDF L Y+PH I A V+V Sbjct: 1 PEVRDLFAFRYEDFELLDYDPHPHIKAPVAV 31 >gi|115739464|ref|XP_001198552.1| PREDICTED: similar to GA16493-PA, partial [Strongylocentrotus purpuratus] gi|115969033|ref|XP_001185436.1| PREDICTED: similar to GA16493-PA, partial [Strongylocentrotus purpuratus] Length = 45 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 27/45 (60%) Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R PR P++ I + ++ F++EDF + Y+P+ I +++V Sbjct: 1 LKRVPRQFPKLNIKRKVTNIDDFKFEDFEIEGYKPYPKITMQMAV 45 >gi|327401179|ref|YP_004342018.1| thymidylate synthase [Archaeoglobus veneficus SNP6] gi|327316687|gb|AEA47303.1| thymidylate synthase [Archaeoglobus veneficus SNP6] Length = 431 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 12/129 (9%) Query: 91 GPIYGVQWRS-WPDYDGNVIDQISSIVQSLRADPYSRRHIVS---AWNVALIDKMALPPC 146 G +Y R+ + + D +DQ+ ++ LR + R V W++ + PPC Sbjct: 285 GEVYTYAERARYCENDEVKVDQLYMCMEKLREERCRRDCYVGISRPWDLTSDE----PPC 340 Query: 147 HCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 +Q D +L+ Y RS D++ + N+ +++ LT +A + F + H Sbjct: 341 LRGYQLVCEIQNDCNRLAGIFYMRSNDIYGAMHANMFAFATLTEYVAELTDFSGCTYYHF 400 Query: 203 LGDVHLYNN 211 D H+Y Sbjct: 401 ANDAHIYGE 409 >gi|7688993|gb|AAF67636.1| thymidylate synthetase [Equus caballus] Length = 26 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 15/24 (62%), Positives = 20/24 (83%) Query: 172 LGIPFNIASYSLLTMMLASVIGFQ 195 LG+PFNIASY+LLT M+A + G + Sbjct: 3 LGVPFNIASYALLTYMIAHITGLK 26 >gi|158521756|ref|YP_001529626.1| thymidylate synthase-like protein [Desulfococcus oleovorans Hxd3] gi|158510582|gb|ABW67549.1| thymidylate synthase-like protein [Desulfococcus oleovorans Hxd3] Length = 263 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%) Query: 105 DGNV-IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL--PPCHCLFQFYVDNGKLSC 161 DG + I+QI ++ + + + R+ VA +AL PPC + + +L Sbjct: 144 DGRLYINQIEWVIDTYKR--FGARNNQMVLQVAEPSDLALLDPPCLRSIDTRIQDDQLIF 201 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +Y RS D++ G+P N+A L +A IG G I +HLY + A L+ Sbjct: 202 FVYFRSWDLWGGLPANLAGIQNLKEYMAGEIGVADGPMIVESKGLHLYGYAEDLAKLRCL 261 Query: 222 RS 223 ++ Sbjct: 262 KT 263 >gi|299778996|ref|YP_003734190.1| hypothetical protein EME08_gp040 [Enterobacteria phage IME08] gi|298105725|gb|ADI55369.1| hypothetical protein [Enterobacteria phage IME08] Length = 232 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 5/116 (4%) Query: 104 YDGNVIDQISSIVQSLRADPYSRR---HIVSAWNVALID--KMALPPCHCLFQFYVDNGK 158 Y ++ Q+ ++++ L+ SRR I+ + AL+D + PC +Y+ +G+ Sbjct: 110 YGPRIVAQLPALLKELKEKENSRRVVFQILQEQDQALLDSDESLEYPCTDSVTYYIRDGR 169 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 L + RS + + + + L +A G G + HT+ H++ F+ Sbjct: 170 LYAHTHMRSQNCAIVMQLDFYLQGKLMAFIAEQCGVGLGTYSHTMVSAHVFERDFD 225 >gi|289721260|gb|ADD17656.1| thymidylate synthase [Meles meles meles] gi|289721262|gb|ADD17657.1| thymidylate synthase [Meles meles meles] gi|289721264|gb|ADD17658.1| thymidylate synthase [Meles meles meles] gi|289721266|gb|ADD17659.1| thymidylate synthase [Meles meles leucurus] gi|289721268|gb|ADD17660.1| thymidylate synthase [Meles meles leucurus] gi|289721270|gb|ADD17661.1| thymidylate synthase [Meles meles leucurus] gi|289721272|gb|ADD17662.1| thymidylate synthase [Meles meles leucurus] gi|289721274|gb|ADD17663.1| thymidylate synthase [Meles meles leucurus] gi|289721276|gb|ADD17664.1| thymidylate synthase [Meles meles leucurus] gi|289721278|gb|ADD17665.1| thymidylate synthase [Meles anakuma] gi|289721280|gb|ADD17666.1| thymidylate synthase [Meles anakuma] Length = 24 Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/24 (62%), Positives = 20/24 (83%) Query: 172 LGIPFNIASYSLLTMMLASVIGFQ 195 LG+PFNIASY+LLT M+A + G + Sbjct: 1 LGVPFNIASYALLTYMIAHITGLK 24 >gi|298493070|ref|YP_003723247.1| thymidylate synthase ['Nostoc azollae' 0708] gi|298234988|gb|ADI66124.1| thymidylate synthase ['Nostoc azollae' 0708] Length = 497 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 13/154 (8%) Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 S+L ++ I D+ +++G + YG + RSW D QI +V L + + + Sbjct: 255 SFLEQYISQILDDSPNREG-VKYTYGQRLRSWFGRD-----QIEQVVNKLVGEIDAASAV 308 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ W+V D+ P + ++ VDN +LS RS D+F P N L + Sbjct: 309 MTLWDVKDHDQGGSPCLNHIWLRIVDN-ELSLTATLRSNDMFAAWPANAMGLRALQKHIR 367 Query: 190 SVIG------FQYGEFIHTLGDVHLYNNHFEQAD 217 I + G I H+Y++ + A+ Sbjct: 368 DEIAKRSEYDLKMGPLITLSQSAHIYDDTWSNAE 401 >gi|161622540|ref|YP_001595168.1| hypothetical protein EpJS98_gp039 [Enterobacteria phage JS98] gi|238695195|ref|YP_002922388.1| hypothetical protein EpJS10_0039 [Enterobacteria phage JS10] gi|160331891|gb|AAU29230.2| hypothetical protein EpJS98_0039 [Enterobacteria phage JS98] gi|220029331|gb|ACL78265.1| hypothetical protein EpJS10_0039 [Enterobacteria phage JS10] Length = 232 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 5/116 (4%) Query: 104 YDGNVIDQISSIVQSLRADPYSRR---HIVSAWNVALID--KMALPPCHCLFQFYVDNGK 158 Y ++ Q+ ++++ L+ SRR I+ + AL+D + PC +Y+ +G+ Sbjct: 110 YGPRIVAQLPALLKELKEKANSRRVVFQILQEQDQALLDSDESLEYPCTDSVTYYIRDGR 169 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 L + RS + + + + L +A G G + HT+ H++ F+ Sbjct: 170 LYAHTHMRSQNCAVVMQLDFYLQGKLMAFIAEQCGVGLGTYSHTMVSAHVFERDFD 225 >gi|254410174|ref|ZP_05023954.1| thymidylate synthase, putative [Microcoleus chthonoplastes PCC 7420] gi|196183210|gb|EDX78194.1| thymidylate synthase, putative [Microcoleus chthonoplastes PCC 7420] Length = 421 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%) Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG + RSW D QI I+ L + + ++S W+V ++ P + L+ Sbjct: 201 YGQRLRSWFGKD-----QIEQIITKLIGEIDAASAVMSLWDVKDHEQGGSPCLNHLWARV 255 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG------FQYGEFIHTLGDVH 207 VD+ +LS RS D+++ P N L + I + G I H Sbjct: 256 VDH-ELSLTATLRSNDMYMAWPSNAMGLRALQQYIRDEIAQRSSYDLRMGPLITISQSAH 314 Query: 208 LYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 +Y++ +E AD QL R + P + N + D Sbjct: 315 IYDDTWENAD-QLIR--KQYPAICRNRDFYD 342 >gi|282898249|ref|ZP_06306240.1| Thymidylate synthase, putative [Raphidiopsis brookii D9] gi|281196780|gb|EFA71685.1| Thymidylate synthase, putative [Raphidiopsis brookii D9] Length = 513 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 21/162 (12%) Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 SYL + + D+ +++G + YG + RSW D QI ++ L D S R + Sbjct: 255 SYLPEYISQVLDDAPEQEG-VKYTYGKRLRSWFGKD-----QIQQVIDKLTNDFDSARAV 308 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 +S W+ D PPC + + +LS RS D+F P N L + Sbjct: 309 MSLWDPEQ-DHHDSPPCLNHIWVRIMDNQLSLTATFRSNDMFSAWPANAMGLRALQKYIY 367 Query: 190 SVI--------------GFQYGEFIHTLGDVHLYNNHFEQAD 217 + Q G I H+Y+ +E A+ Sbjct: 368 DRVHNGVDNKTNQDFFGQLQLGPLITISQSAHIYDECWESAE 409 >gi|311992571|ref|YP_004009439.1| putative thymidylate synthase [Acinetobacter phage Ac42] gi|298684354|gb|ADI96315.1| putative thymidylate synthase [Acinetobacter phage Ac42] Length = 235 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 5/112 (4%) Query: 104 YDGNVIDQISSIVQSLRADPYSRR---HIVSAWNVALID--KMALPPCHCLFQFYVDNGK 158 Y ++ Q+ ++++ LR SRR I+ + L+D + PC FY+ N + Sbjct: 112 YGPRIVAQMPALLKELREKENSRRVVFQILQEQDQVLLDSDETLEYPCTDSITFYIRNNQ 171 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 L + RS + + + + M +A +G G + H++ H++ Sbjct: 172 LFMHTHMRSQNCAVVMQLDFYLMQRFMMYMAEQLGISVGTYSHSIVSAHVFE 223 >gi|170580066|ref|XP_001895098.1| hypothetical protein Bm1_18205 [Brugia malayi] gi|158598062|gb|EDP36047.1| hypothetical protein Bm1_18205 [Brugia malayi] Length = 83 Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 10/63 (15%) Query: 82 EWADK-DGELGPIYGVQ-------WRSW-PDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 +++D+ +G+L P+YG Q +R DY IDQ+S I+ ++ +P++ R I++A Sbjct: 21 DFSDRSEGDLRPVYGFQGNTVLAEYRGMDADYINQGIDQLSEIIDLMKNEPHN-RCILNA 79 Query: 133 WNV 135 WNV Sbjct: 80 WNV 82 >gi|157362353|dbj|BAF80312.1| thymidylate synthase [Macaca mulatta] Length = 68 Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 22/36 (61%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL 38 QYL + H+++ G + D TG GT S +G Q R+ L Sbjct: 32 QYLGQIEHILRCGVRKDDGTGTGTLSVYGMQARYSL 67 >gi|227431937|ref|ZP_03913958.1| possible thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352306|gb|EEJ42511.1| possible thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 168 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 13/47 (27%), Positives = 29/47 (61%) Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 +Y R+ D F G+ +I S++ + +A + + G++ H++G +H+Y Sbjct: 3 VYMRANDAFRGMVSDIFSFTFIQEFMARELNLKVGKYYHSMGTMHIY 49 >gi|298530528|ref|ZP_07017930.1| thymidylate synthase-like protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509902|gb|EFI33806.1| thymidylate synthase-like protein [Desulfonatronospira thiodismutans ASO3-1] Length = 224 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA-SVIGFQYGEFIHT 202 PPC + +G+L Y RS D++ G P N+A ++L +A S+ G G + + Sbjct: 141 PPCLRHIDMRIRDGRLIFYPYFRSWDLWGGFPANLAGIAVLQKYMADSIEGVSPGPILAS 200 Query: 203 LGDVHLYNNHFEQADLQLSRS 223 +H+Y E A ++ R Sbjct: 201 SKGLHIYGYAEELARIRTCRK 221 >gi|168804052|ref|YP_001686983.1| thymidylate synthase-like protein [Glossina pallidipes salivary gland hypertrophy virus] gi|146164239|gb|ABQ08808.1| thymidylate synthase-like protein [Glossina pallidipes salivary gland hypertrophy virus] Length = 87 Score = 36.6 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR--TLPQMII 232 P IA YSLLT M+A V +T+G Y N +E LQ + P++I+ Sbjct: 6 PLTIAKYSLLTYMIAYVCNLMPYSITYTMGVS--YINKYELDILQSYTKMKQYKFPRLIV 63 Query: 233 NPNIVDLLSFRYEDFTLRSYE 253 + D+ SF +F L Y+ Sbjct: 64 EHYVKDIYSFNLGNFLLYDYQ 84 >gi|300869012|ref|ZP_07113615.1| hypothetical protein OSCI_3890023 [Oscillatoria sp. PCC 6506] gi|300332992|emb|CBN58807.1| hypothetical protein OSCI_3890023 [Oscillatoria sp. PCC 6506] Length = 354 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 1/101 (0%) Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP-PCHCLFQFYVDNGKLSCQLYQRS 167 IDQ + +R S+R ++ + + + PC F NGKL Y R+ Sbjct: 130 IDQFEASAHLIREKKSSKRVTLAIYQPNDCGRKSQDIPCIVSIIFSPRNGKLHTTAYMRA 189 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 DV+ + +++ ++L +A+ + G + H + +HL Sbjct: 190 NDVYRILCYDLFELTMLAEFMAAYTDIELGYYYHIVTSMHL 230 Searching..................................................done Results from round 2 >gi|255066674|ref|ZP_05318529.1| thymidylate synthase [Neisseria sicca ATCC 29256] gi|255049002|gb|EET44466.1| thymidylate synthase [Neisseria sicca ATCC 29256] Length = 264 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 182/264 (68%), Positives = 221/264 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVFENGTDKSDRTGTGTRSVFGYQMRFDLSQGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD HLY+NHFEQA LQLSR+PRTLP M INP + DL Sbjct: 181 YALLTMMVAQVCGLEAGEFIHTLGDAHLYSNHFEQAKLQLSRAPRTLPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A V+V Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVAV 264 >gi|325205579|gb|ADZ01032.1| thymidylate synthase [Neisseria meningitidis M04-240196] Length = 264 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 181/264 (68%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R PRTLP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L Y+PH I A VSV Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264 >gi|313667906|ref|YP_004048190.1| thymidylate synthase [Neisseria lactamica ST-640] gi|313005368|emb|CBN86802.1| thymidylate synthase [Neisseria lactamica 020-06] Length = 264 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264 >gi|254805456|ref|YP_003083677.1| Thymidylate synthase [Neisseria meningitidis alpha14] gi|254668998|emb|CBA07364.1| Thymidylate synthase [Neisseria meningitidis alpha14] gi|325142868|gb|EGC65235.1| thymidylate synthase [Neisseria meningitidis 961-5945] gi|325198801|gb|ADY94257.1| thymidylate synthase [Neisseria meningitidis G2136] Length = 264 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 180/264 (68%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R PRTLP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L Y+PH I A VSV Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264 >gi|121635345|ref|YP_975590.1| thymidylate synthase [Neisseria meningitidis FAM18] gi|166231719|sp|A1KVB3|TYSY_NEIMF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120867051|emb|CAM10814.1| thymidylate synthase [Neisseria meningitidis FAM18] gi|325132802|gb|EGC55482.1| thymidylate synthase [Neisseria meningitidis M6190] gi|325138705|gb|EGC61257.1| thymidylate synthase [Neisseria meningitidis ES14902] Length = 264 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L Y+PH I A VSV Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264 >gi|15677556|ref|NP_274712.1| thymidylate synthase [Neisseria meningitidis MC58] gi|304386810|ref|ZP_07369075.1| thymidylate synthase [Neisseria meningitidis ATCC 13091] gi|20455363|sp|Q9JY72|TYSY_NEIMB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|7226964|gb|AAF42056.1| thymidylate synthase [Neisseria meningitidis MC58] gi|261392072|emb|CAX49566.1| thymidylate synthase (TS; TSase) [Neisseria meningitidis 8013] gi|304339119|gb|EFM05208.1| thymidylate synthase [Neisseria meningitidis ATCC 13091] gi|316984858|gb|EFV63815.1| thymidylate synthase [Neisseria meningitidis H44/76] gi|325128751|gb|EGC51614.1| thymidylate synthase [Neisseria meningitidis N1568] gi|325140830|gb|EGC63340.1| thymidylate synthase [Neisseria meningitidis CU385] gi|325199699|gb|ADY95154.1| thymidylate synthase [Neisseria meningitidis H44/76] gi|325204666|gb|ADZ00120.1| thymidylate synthase [Neisseria meningitidis M01-240355] Length = 264 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 177/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++++ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L Y+PH I A VSV Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264 >gi|269214226|ref|ZP_05986099.2| thymidylate synthase [Neisseria lactamica ATCC 23970] gi|269210433|gb|EEZ76888.1| thymidylate synthase [Neisseria lactamica ATCC 23970] Length = 266 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEVGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266 >gi|224826342|ref|ZP_03699444.1| Thymidylate synthase [Lutiella nitroferrum 2002] gi|224601443|gb|EEG07624.1| Thymidylate synthase [Lutiella nitroferrum 2002] Length = 264 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 177/264 (67%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G + DRTG GT S FGYQMRFDL+ GFPLLTTKK+H KS+VHELL Sbjct: 1 MKQYLDLMRHVREHGHYKSDRTGTGTLSVFGYQMRFDLADGFPLLTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G LGP+YG QWRSWP DG +DQI+++V+ ++ Sbjct: 61 WFLSGDTNIRYLKENGVSIWDEWADENGNLGPVYGYQWRSWPAPDGRHVDQIANVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HTLGD HLY+NH EQAD QL+R PR LP M INP + DL Sbjct: 181 YALLTMMVAQVCGLKPGEFVHTLGDAHLYSNHLEQADEQLAREPRPLPVMKINPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L Y+P I AKV+V Sbjct: 241 AFRFEDFELEGYDPMPHIKAKVAV 264 >gi|325130730|gb|EGC53467.1| thymidylate synthase [Neisseria meningitidis OX99.30304] gi|325136647|gb|EGC59247.1| thymidylate synthase [Neisseria meningitidis M0579] gi|325201639|gb|ADY97093.1| thymidylate synthase [Neisseria meningitidis M01-240149] gi|325208626|gb|ADZ04078.1| thymidylate synthase [Neisseria meningitidis NZ-05/33] Length = 264 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 177/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264 >gi|146280809|ref|YP_001170962.1| thymidylate synthase [Pseudomonas stutzeri A1501] gi|145569014|gb|ABP78120.1| thymidylate synthase [Pseudomonas stutzeri A1501] Length = 272 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL Sbjct: 9 MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELL 68 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IWDEWAD++GELGP+YG QWRSWP +G IDQI++++ ++ Sbjct: 69 WFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIK 128 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 129 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 188 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V + GEFI + GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 189 YALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQADLQLTREPLPLPTMKLNPEVKDLF 248 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE H I A V+V Sbjct: 249 AFRFEDFELVGYEAHPHIKAPVAV 272 >gi|313674832|ref|YP_004052828.1| thymidylate synthase [Marivirga tractuosa DSM 4126] gi|312941530|gb|ADR20720.1| thymidylate synthase [Marivirga tractuosa DSM 4126] Length = 264 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L++H++ G + DRTG GT S FGYQMRFDLS+GFP++TTKK+H +S++HELL Sbjct: 1 MKQYHELMKHILDKGVQKGDRTGTGTISVFGYQMRFDLSEGFPVVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++GELGP+YG QWR+WP DG IDQIS I+ ++ Sbjct: 61 WFLKGETNIKYLKENGVSIWDEWADENGELGPVYGSQWRNWPTPDGQHIDQISQIIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWNVA + MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NTPNSRRIMVSAWNVADVPNMALPPCHALFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+FIHTLGD HLY+NH EQ +LQLSR P LP+M INPN+ ++ Sbjct: 181 YALLTMMVAQVCDLEPGDFIHTLGDAHLYSNHLEQTELQLSREPYPLPKMKINPNVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y+ H I A V+V Sbjct: 241 DFKFEDFELVDYQYHPHIKAPVAV 264 >gi|218768724|ref|YP_002343236.1| thymidylate synthase [Neisseria meningitidis Z2491] gi|20455362|sp|Q9JT57|TYSY_NEIMA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|121052732|emb|CAM09075.1| thymidylate synthase [Neisseria meningitidis Z2491] gi|319410956|emb|CBY91352.1| thymidylate synthase (TS; TSase) [Neisseria meningitidis WUE 2594] Length = 264 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++++ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264 >gi|325134758|gb|EGC57395.1| thymidylate synthase [Neisseria meningitidis M13399] gi|325145101|gb|EGC67384.1| thymidylate synthase [Neisseria meningitidis M01-240013] Length = 264 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY+NHFEQA LQL R P LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHFEQAALQLEREPCALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264 >gi|59801705|ref|YP_208417.1| thymidylate synthase [Neisseria gonorrhoeae FA 1090] gi|239999430|ref|ZP_04719354.1| thymidylate synthase [Neisseria gonorrhoeae 35/02] gi|240014606|ref|ZP_04721519.1| thymidylate synthase [Neisseria gonorrhoeae DGI18] gi|240017051|ref|ZP_04723591.1| thymidylate synthase [Neisseria gonorrhoeae FA6140] gi|240081310|ref|ZP_04725853.1| thymidylate synthase [Neisseria gonorrhoeae FA19] gi|240113520|ref|ZP_04728010.1| thymidylate synthase [Neisseria gonorrhoeae MS11] gi|240116127|ref|ZP_04730189.1| thymidylate synthase [Neisseria gonorrhoeae PID18] gi|240118411|ref|ZP_04732473.1| thymidylate synthase [Neisseria gonorrhoeae PID1] gi|240121128|ref|ZP_04734090.1| thymidylate synthase [Neisseria gonorrhoeae PID24-1] gi|240123956|ref|ZP_04736912.1| thymidylate synthase [Neisseria gonorrhoeae PID332] gi|240126156|ref|ZP_04739042.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679] gi|240128633|ref|ZP_04741294.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035] gi|254494147|ref|ZP_05107318.1| thymidylate synthase [Neisseria gonorrhoeae 1291] gi|260440061|ref|ZP_05793877.1| thymidylate synthase [Neisseria gonorrhoeae DGI2] gi|268595249|ref|ZP_06129416.1| thymidylate synthase [Neisseria gonorrhoeae 35/02] gi|268597414|ref|ZP_06131581.1| thymidylate synthase [Neisseria gonorrhoeae FA19] gi|268599588|ref|ZP_06133755.1| thymidylate synthase [Neisseria gonorrhoeae MS11] gi|268601794|ref|ZP_06135961.1| thymidylate synthase [Neisseria gonorrhoeae PID18] gi|268604126|ref|ZP_06138293.1| thymidylate synthase [Neisseria gonorrhoeae PID1] gi|268682584|ref|ZP_06149446.1| thymidylate synthase [Neisseria gonorrhoeae PID332] gi|268684744|ref|ZP_06151606.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679] gi|268687023|ref|ZP_06153885.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035] gi|75507349|sp|Q5F732|TYSY_NEIG1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|59718600|gb|AAW90005.1| putative thymidylate synthase B [Neisseria gonorrhoeae FA 1090] gi|226513187|gb|EEH62532.1| thymidylate synthase [Neisseria gonorrhoeae 1291] gi|268548638|gb|EEZ44056.1| thymidylate synthase [Neisseria gonorrhoeae 35/02] gi|268551202|gb|EEZ46221.1| thymidylate synthase [Neisseria gonorrhoeae FA19] gi|268583719|gb|EEZ48395.1| thymidylate synthase [Neisseria gonorrhoeae MS11] gi|268585925|gb|EEZ50601.1| thymidylate synthase [Neisseria gonorrhoeae PID18] gi|268588257|gb|EEZ52933.1| thymidylate synthase [Neisseria gonorrhoeae PID1] gi|268622868|gb|EEZ55268.1| thymidylate synthase [Neisseria gonorrhoeae PID332] gi|268625028|gb|EEZ57428.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679] gi|268627307|gb|EEZ59707.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035] Length = 264 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAVVSV 264 >gi|293398657|ref|ZP_06642835.1| thymidylate synthase [Neisseria gonorrhoeae F62] gi|291611128|gb|EFF40225.1| thymidylate synthase [Neisseria gonorrhoeae F62] Length = 265 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 2 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 62 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 122 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 181 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 182 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 241 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 242 AFKFEDFELEGYDPHPHIKAVVSV 265 >gi|226313973|ref|YP_002773869.1| thymidylate synthase [Brevibacillus brevis NBRC 100599] gi|254790230|sp|C0ZI91|TYSY_BREBN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226096923|dbj|BAH45365.1| thymidylate synthase [Brevibacillus brevis NBRC 100599] Length = 264 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 158/264 (59%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL + ++ G + DRTG GT S FG+QMRFDLS+GFP++TTKK+H KS++HELL Sbjct: 1 MKQYLDLCQRILDEGVIKEDRTGTGTTSVFGHQMRFDLSEGFPMVTTKKLHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW+EWAD++G+LGP+YG QWRS+ DG +DQI ++ ++ Sbjct: 61 WFLSGDTNVRYLQENGVRIWNEWADENGDLGPVYGSQWRSFTGRDGKTVDQIQWVIDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +DKMALPPCH LFQFYV NGKLSCQLYQRSGD FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPAELDKMALPPCHLLFQFYVANGKLSCQLYQRSGDTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT+GD HLY NH EQ LQL+R P+ LP++++NP++ + Sbjct: 181 YALLTHMVAHVTGLEVGDFVHTIGDAHLYLNHIEQVKLQLTREPKPLPKLVLNPDVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YED + YE H I +V+V Sbjct: 241 DFKYEDIEIVGYESHPHIKGEVAV 264 >gi|308389827|gb|ADO32147.1| thymidylate synthase [Neisseria meningitidis alpha710] Length = 266 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY+NHFEQA LQL R P LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHFEQAALQLEREPCALPVMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266 >gi|254671837|emb|CBA03996.1| Thymidylate synthase [Neisseria meningitidis alpha275] Length = 266 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI+++++ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266 >gi|194099130|ref|YP_002002215.1| thymidylate synthase [Neisseria gonorrhoeae NCCP11945] gi|291043350|ref|ZP_06569073.1| thymidylate synthase [Neisseria gonorrhoeae DGI2] gi|193934420|gb|ACF30244.1| thymidylate synthase [Neisseria gonorrhoeae NCCP11945] gi|291012956|gb|EFE04939.1| thymidylate synthase [Neisseria gonorrhoeae DGI2] gi|317164678|gb|ADV08219.1| thymidylate synthase [Neisseria gonorrhoeae TCDC-NG08107] Length = 266 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAVVSV 266 >gi|291614975|ref|YP_003525132.1| thymidylate synthase [Sideroxydans lithotrophicus ES-1] gi|291585087|gb|ADE12745.1| thymidylate synthase [Sideroxydans lithotrophicus ES-1] Length = 264 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G+ + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL Sbjct: 1 MRQYLDLMQHVLEHGTKKSDRTGTGTTSVFGYQMRFDLSQGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N YL +GVSIWDEWAD+ G LGP+YG QWRSW DG VIDQI V+ +R Sbjct: 61 WFLQGSTNTKYLKDNGVSIWDEWADEQGNLGPVYGKQWRSWETVDGRVIDQIKVAVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G +YG+F+HT GD HLY+NH EQ QLSR PR LP M INP++ D+ Sbjct: 181 YALLTMMMAQVCGLKYGDFVHTFGDAHLYSNHMEQTATQLSREPRALPTMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL Y+PH AI A V+V Sbjct: 241 GFKFEDFTLEGYDPHPAIKAPVAV 264 >gi|297250452|ref|ZP_06934052.1| thymidylate synthase [Neisseria polysaccharea ATCC 43768] gi|296838954|gb|EFH22892.1| thymidylate synthase [Neisseria polysaccharea ATCC 43768] Length = 266 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 177/264 (67%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RH + G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHALDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEVGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266 >gi|172045633|sp|A4VGL9|TYSY_PSEU5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|327479077|gb|AEA82387.1| thymidylate synthase [Pseudomonas stutzeri DSM 4166] Length = 264 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL Sbjct: 1 MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IWDEWAD++GELGP+YG QWRSWP +G IDQI++++ ++ Sbjct: 61 WFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V + GEFI + GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 181 YALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQADLQLTREPLPLPTMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE H I A V+V Sbjct: 241 AFRFEDFELVGYEAHPHIKAPVAV 264 >gi|161579483|ref|NP_296349.2| thymidylate synthase [Deinococcus radiodurans R1] Length = 264 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD LRH+ G+D+ DRTG GTRS FGYQMRFDLS+GFPL+TTK+VH KS+++ELL Sbjct: 1 MKQYLDFLRHIRDHGTDKMDRTGTGTRSVFGYQMRFDLSEGFPLVTTKRVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSNV +L HGV+IWDEWA + GELGP+YGVQWRSWPDY G IDQIS +++ ++ Sbjct: 61 WFLRGDSNVRWLQEHGVTIWDEWAREGGELGPVYGVQWRSWPDYGGGQIDQISQVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ID+MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVAQIDEMALPPCHLLFQFYVADGKLSCQLYQRSADSFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFI T GD H+Y+NH EQ + QL R PR LP+M +NP + D+ Sbjct: 181 YALLTMMVAQVCGLEPGEFIWTGGDCHIYSNHMEQVERQLKREPRPLPKMRLNPAVKDMF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+YEDFTL Y+PH I A+V+V Sbjct: 241 AFQYEDFTLEGYDPHPGIKAEVAV 264 >gi|261378912|ref|ZP_05983485.1| thymidylate synthase [Neisseria cinerea ATCC 14685] gi|269144729|gb|EEZ71147.1| thymidylate synthase [Neisseria cinerea ATCC 14685] Length = 264 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 179/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDSGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R R LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLGRECRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L Y+PH I A VSV Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264 >gi|261365658|ref|ZP_05978541.1| thymidylate synthase [Neisseria mucosa ATCC 25996] gi|288565822|gb|EFC87382.1| thymidylate synthase [Neisseria mucosa ATCC 25996] Length = 264 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 179/264 (67%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G+D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL Sbjct: 1 MKAYHDLMRHVLENGTDKSDRTGTGTRSVFGYQMRFDLSQGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q GEFIHT GD HLY+NHFEQA LQLSR R LP M INP + DL Sbjct: 181 YALLTMMIAQVCGLQAGEFIHTFGDAHLYSNHFEQAKLQLSRDFRALPVMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A V+V Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVAV 264 >gi|291618667|ref|YP_003521409.1| ThyA [Pantoea ananatis LMG 20103] gi|291153697|gb|ADD78281.1| ThyA [Pantoea ananatis LMG 20103] Length = 279 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R+V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 16 MKQYLDLMRYVLNEGTPKSDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 75 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD+ G LGP+YG QWRSW G IDQI+ +++ L+ Sbjct: 76 WFLQGDTNIGYLKENNVSIWDEWADEQGNLGPVYGKQWRSWGTASGQEIDQITKVIEQLK 135 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 136 RDPDSRRIIVSAWNVGELDEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 195 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQA LQL+R PR LP ++I L Sbjct: 196 YALLVHMVAQQCDLDVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPTLVIKRKPASLF 255 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH AI A V+V Sbjct: 256 DYRFDDFEIEGYDPHPAIKAPVAV 279 >gi|6460459|gb|AAF12166.1|AE002092_4 thymidylate synthase [Deinococcus radiodurans R1] Length = 387 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 177/263 (67%), Positives = 214/263 (81%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLD LRH+ G+D+ DRTG GTRS FGYQMRFDLS+GFPL+TTK+VH KS+++ELLW Sbjct: 125 KQYLDFLRHIRDHGTDKMDRTGTGTRSVFGYQMRFDLSEGFPLVTTKRVHLKSIIYELLW 184 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGDSNV +L HGV+IWDEWA + GELGP+YGVQWRSWPDY G IDQIS +++ ++ Sbjct: 185 FLRGDSNVRWLQEHGVTIWDEWAREGGELGPVYGVQWRSWPDYGGGQIDQISQVIEQIKT 244 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR IVSAWNVA ID+MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIASY Sbjct: 245 NPDSRRLIVSAWNVAQIDEMALPPCHLLFQFYVADGKLSCQLYQRSADSFLGVPFNIASY 304 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLTMM+A V G + GEFI T GD H+Y+NH EQ + QL R PR LP+M +NP + D+ + Sbjct: 305 ALLTMMVAQVCGLEPGEFIWTGGDCHIYSNHMEQVERQLKREPRPLPKMRLNPAVKDMFA 364 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 F+YEDFTL Y+PH I A+V+V Sbjct: 365 FQYEDFTLEGYDPHPGIKAEVAV 387 >gi|253996898|ref|YP_003048962.1| thymidylate synthase [Methylotenera mobilis JLW8] gi|253983577|gb|ACT48435.1| thymidylate synthase [Methylotenera mobilis JLW8] Length = 264 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+DL++HV + G+ + DRTG GT S FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYIDLVQHVFEHGNKKEDRTGTGTVSVFGYQMRFNLAEGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV IWDEWAD++G LGP+YG QWR+WP DG+ IDQI+ +V S++ Sbjct: 61 WFLQGSTNIAYLKENGVRIWDEWADENGNLGPVYGYQWRNWPKPDGSHIDQIAQVVNSIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+M LPPCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y+NHFEQ QL R PR LP M INP + D+ Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYSNHFEQMHEQLQRDPRPLPTMRINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDFTL Y+PH I +V+V Sbjct: 241 SFKFEDFTLEGYDPHPPIKGQVAV 264 >gi|225076554|ref|ZP_03719753.1| hypothetical protein NEIFLAOT_01602 [Neisseria flavescens NRL30031/H210] gi|224952117|gb|EEG33326.1| hypothetical protein NEIFLAOT_01602 [Neisseria flavescens NRL30031/H210] Length = 266 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 216/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FGYQMRFDL +GFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGRGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 182 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR R+LP M INP + DL Sbjct: 183 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRSLPTMKINPEVKDLF 242 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266 >gi|34496482|ref|NP_900697.1| thymidylate synthase [Chromobacterium violaceum ATCC 12472] gi|62901352|sp|Q7NZ95|TYSY_CHRVO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|34102336|gb|AAQ58702.1| thymidylate synthase [Chromobacterium violaceum ATCC 12472] Length = 264 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 175/264 (66%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV++ G D+ DRTG GTRS FGYQMRFDL+ GFPL+TTKK H +S++HELL Sbjct: 1 MQQYLDLMRHVLEHGHDKADRTGTGTRSVFGYQMRFDLAAGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQIS ++ ++ Sbjct: 61 WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQISQLLDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDQMALPPCHSLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q G+F+HTLGD HLY+NH EQA LQL+R PR LP M +NP + DL Sbjct: 181 YALLTMMVAQVCGLQPGDFVHTLGDAHLYSNHLEQARLQLTRDPRPLPTMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++DF L Y+PH I A+V+V Sbjct: 241 AFTFDDFALEGYDPHPHIKAQVAV 264 >gi|300021803|ref|YP_003754414.1| thymidylate synthase [Hyphomicrobium denitrificans ATCC 51888] gi|299523624|gb|ADJ22093.1| thymidylate synthase [Hyphomicrobium denitrificans ATCC 51888] Length = 264 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR V G + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H KS++ ELL Sbjct: 1 MQQYLDLLRRVRTEGVKKTDRTGTGTLSVFGHQMRFDLSEGFPLVTTKKLHVKSIIVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL + VSIWDEWAD +GELGP+YG QWR+W DG IDQI +V++L+ Sbjct: 61 WFLSGATNIEYLKANDVSIWDEWADPEGELGPVYGKQWRAWSAPDGETIDQIKEVVETLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A I +MAL PCHCL QFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRIIVSAWNPADIPRMALAPCHCLVQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GD HLY NH EQADLQLSR+PR LP+M INP + + Sbjct: 181 YALLTMMMAQVTGLEPGEFVHTFGDAHLYLNHLEQADLQLSRTPRALPRMKINPAVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF+L Y+P I A V+V Sbjct: 241 DFKYEDFSLEGYDPWPHIKAPVAV 264 >gi|15595539|ref|NP_249033.1| thymidylate synthase [Pseudomonas aeruginosa PAO1] gi|107099326|ref|ZP_01363244.1| hypothetical protein PaerPA_01000338 [Pseudomonas aeruginosa PACS2] gi|116054070|ref|YP_788513.1| thymidylate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|218889083|ref|YP_002437947.1| thymidylate synthase [Pseudomonas aeruginosa LESB58] gi|254237422|ref|ZP_04930745.1| thymidylate synthase [Pseudomonas aeruginosa C3719] gi|254243441|ref|ZP_04936763.1| thymidylate synthase [Pseudomonas aeruginosa 2192] gi|296386838|ref|ZP_06876337.1| thymidylate synthase [Pseudomonas aeruginosa PAb1] gi|22096233|sp|Q9I6F1|TYSY_PSEAE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|122261789|sp|Q02U73|TYSY_PSEAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713171|sp|B7V2Q5|TYSY_PSEA8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|9946191|gb|AAG03731.1|AE004472_3 thymidylate synthase [Pseudomonas aeruginosa PAO1] gi|115589291|gb|ABJ15306.1| thymidylate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169353|gb|EAZ54864.1| thymidylate synthase [Pseudomonas aeruginosa C3719] gi|126196819|gb|EAZ60882.1| thymidylate synthase [Pseudomonas aeruginosa 2192] gi|218769306|emb|CAW25066.1| thymidylate synthase [Pseudomonas aeruginosa LESB58] Length = 264 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL Sbjct: 1 MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ L+ Sbjct: 61 WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMAMLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L YE H I A V+V Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264 >gi|91775259|ref|YP_545015.1| thymidylate synthase [Methylobacillus flagellatus KT] gi|91775403|ref|YP_545159.1| thymidylate synthase [Methylobacillus flagellatus KT] gi|115502470|sp|Q9RAM7|TYSY_METFK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91709246|gb|ABE49174.1| thymidylate synthase [Methylobacillus flagellatus KT] gi|91709390|gb|ABE49318.1| thymidylate synthase [Methylobacillus flagellatus KT] Length = 264 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G + DRTG GT S FGYQMRFDLS+GFPLLTTKKVH KS++HELL Sbjct: 1 MKVYHDLMRHVLEQGHKKEDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV+IWDEWAD +G LGP+YG QWR+WP DG IDQIS ++ +++ Sbjct: 61 WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGGHIDQISEVIAAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +DKM LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADVDKMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+F+HTLGD H+Y NH EQ QLSR P LP M INP + D+ Sbjct: 181 YALLTMMVAQVCDLKLGDFVHTLGDAHIYLNHLEQVKEQLSREPYPLPVMRINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDFTL +Y+ H AI A V+V Sbjct: 241 AFRFEDFTLENYQSHPAIKAPVAV 264 >gi|27381623|ref|NP_773152.1| thymidylate synthase [Bradyrhizobium japonicum USDA 110] gi|62901370|sp|Q89G35|TYSY_BRAJA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|27354791|dbj|BAC51777.1| thymidylate synthase [Bradyrhizobium japonicum USDA 110] Length = 264 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL ++ G+++ DRTG GT S FG+QMRF+LS GFP+LTTK++ K++VHELL Sbjct: 1 MHQYQDLLERILSDGAEKTDRTGTGTLSVFGHQMRFNLSAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI+++V ++ Sbjct: 61 WFLKGDTNIKYLRDNGVTIWDEWADANGDLGPVYGHQWRSWPAPDGRSIDQIANVVDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +DKMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+H+ GD HLY+NH EQA LQL+R+PR LP M INP++ D+ Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSFGDTHLYSNHLEQAKLQLTRAPRALPVMRINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFR+EDF L Y+PH I A+V+V Sbjct: 241 SFRFEDFELVGYDPHPHIKAEVAV 264 >gi|319637791|ref|ZP_07992557.1| thymidylate synthase [Neisseria mucosa C102] gi|317400946|gb|EFV81601.1| thymidylate synthase [Neisseria mucosa C102] Length = 264 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 179/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV+ G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL Sbjct: 1 MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKENNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR R+LP M INP I DL Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQARLQLSRDFRSLPTMKINPEIKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264 >gi|152988193|ref|YP_001345831.1| thymidylate synthase [Pseudomonas aeruginosa PA7] gi|166231724|sp|A6UYE6|TYSY_PSEA7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|150963351|gb|ABR85376.1| thymidylate synthase [Pseudomonas aeruginosa PA7] Length = 264 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 175/264 (66%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFPL+TTKK H KS+VHELL Sbjct: 1 MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAAGFPLVTTKKCHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ L+ Sbjct: 61 WFLQGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMTMLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEFI T GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 181 YALLTLMVAQVAGLRPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L Y+ H I A V+V Sbjct: 241 DFRFEDFELVGYQAHPHIKAPVAV 264 >gi|294669491|ref|ZP_06734558.1| hypothetical protein NEIELOOT_01389 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308404|gb|EFE49647.1| hypothetical protein NEIELOOT_01389 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 264 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 174/264 (65%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L+RHV++ G D+ DRTG GTRS FGYQMRFDL++GFPLLTTKK+H +S++HELL Sbjct: 1 MKQYLGLMRHVMQNGHDKSDRTGTGTRSVFGYQMRFDLAQGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q GEF+HTLGD H+Y+NHFEQ +LQL+R PR LP+M +N + DL Sbjct: 181 YALLTMMIAQVCGLQPGEFVHTLGDAHIYSNHFEQTELQLAREPRALPKMKLNHAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y+PH I A V+V Sbjct: 241 DFKFEDFELADYDPHPHIKAAVAV 264 >gi|294500806|ref|YP_003564506.1| thymidylate synthase [Bacillus megaterium QM B1551] gi|295706151|ref|YP_003599226.1| thymidylate synthase [Bacillus megaterium DSM 319] gi|294350743|gb|ADE71072.1| thymidylate synthase [Bacillus megaterium QM B1551] gi|294803810|gb|ADF40876.1| thymidylate synthase [Bacillus megaterium DSM 319] Length = 264 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L HV+ G+ + DRTG GT STFGYQMRF+L +GFP+LTTKK+H KS++HELL Sbjct: 1 MKQYLELCEHVLANGTKKEDRTGTGTISTFGYQMRFNLQEGFPVLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSWP DG IDQI++++ ++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADENGELGPVYGHQWRSWPTPDGEKIDQITNVINQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV+ +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRLMVSAWNVSDVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+F+HT GD H+Y+NH EQ +LQL+R P LP+M INP++ + Sbjct: 181 YALLTMMVAQVCDLEPGDFVHTFGDAHIYSNHIEQVNLQLTREPHALPKMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y H I VSV Sbjct: 241 DFKFEDFELVDYNAHPHIKGAVSV 264 >gi|237720128|ref|ZP_04550609.1| thymidylate synthase [Bacteroides sp. 2_2_4] gi|260174020|ref|ZP_05760432.1| thymidylate synthase [Bacteroides sp. D2] gi|293373111|ref|ZP_06619476.1| thymidylate synthase [Bacteroides ovatus SD CMC 3f] gi|299148006|ref|ZP_07041069.1| thymidylate synthase [Bacteroides sp. 3_1_23] gi|315922289|ref|ZP_07918529.1| conserved hypothetical protein [Bacteroides sp. D2] gi|229450680|gb|EEO56471.1| thymidylate synthase [Bacteroides sp. 2_2_4] gi|292631930|gb|EFF50543.1| thymidylate synthase [Bacteroides ovatus SD CMC 3f] gi|298514189|gb|EFI38075.1| thymidylate synthase [Bacteroides sp. 3_1_23] gi|313696164|gb|EFS32999.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 264 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG +YG QWRSWPDY+G IDQIS +V++++ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV +G+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HT GD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264 >gi|72118031|gb|AAZ60294.1| thymidylate synthase [Ralstonia eutropha JMP134] Length = 281 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDLS+GFP++TTKK+H KS++ ELL Sbjct: 18 MKQYLDFMRHVFEHGTEKADRTGTGTRSVFGYQMRFDLSQGFPVVTTKKLHLKSIILELL 77 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GVSIWDEWAD++GELGP+YG QWRSWP DG +DQI+ ++ +R Sbjct: 78 WFLQGSTNVRWLQENGVSIWDEWADENGELGPVYGSQWRSWPTPDGRHVDQITDLLNQIR 137 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 138 ENPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 197 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD H+Y+NH+EQ QLSR P LP + I + Sbjct: 198 YALLTHMIAQQTGLDVGDFVWTGGDCHIYSNHYEQVQTQLSREPLPLPTLKIVRKPDSIF 257 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF L Y+ H AI A V+V Sbjct: 258 DYRYEDFELVGYQSHPAIKAPVAV 281 >gi|330505459|ref|YP_004382328.1| thymidylate synthase [Pseudomonas mendocina NK-01] gi|328919745|gb|AEB60576.1| thymidylate synthase [Pseudomonas mendocina NK-01] Length = 264 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFP++TTKK H +S++HELL Sbjct: 1 MKQYLDLMRHVREHGTFKEDRTGTGTYSVFGYQMRFDLADGFPIVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD++G LGP+YG QWRSWP +G IDQI+ +++ ++ Sbjct: 61 WFLQGDTNIKYLKDNGVSIWDEWADENGNLGPVYGYQWRSWPAPNGESIDQIAKLIEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V Q GEFI T GD HLY NH EQADLQL+R P LP M +NP + DLL Sbjct: 181 YALLTLMVAQVCDLQPGEFIWTGGDCHLYANHIEQADLQLTRQPLPLPTMKLNPEVKDLL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L YE H I A V+V Sbjct: 241 AFKFEDFELVGYEAHPHIKAPVAV 264 >gi|6647289|gb|AAF21131.1|L78665_5 thymidylate synthase [Methylobacillus flagellatus] Length = 264 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 168/264 (63%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G + DRTG GT S FGYQMRFDLS+GFPLLTTKKVH +++HELL Sbjct: 1 MKVYHDLMRHVLEQGHKKEDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKVHLNAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV+IWDEWAD +G LGP+YG QWR+WP DG IDQIS ++ +++ Sbjct: 61 WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGGHIDQISEVIAAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNVA +DKM LPPCH LFQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVADVDKMELPPCHALFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+F+HTLGD H+Y NH EQ QLSR P LP M INP + D+ Sbjct: 181 YALLTMMVARVCDLELGDFVHTLGDAHIYLNHLEQVKEQLSREPYPLPVMRINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDFTL +Y+ H AI A V+V Sbjct: 241 AFRFEDFTLENYQSHPAIKAPVAV 264 >gi|313112042|ref|ZP_07797826.1| thymidylate synthase [Pseudomonas aeruginosa 39016] gi|310884328|gb|EFQ42922.1| thymidylate synthase [Pseudomonas aeruginosa 39016] Length = 264 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL Sbjct: 1 MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+ ++ L+ Sbjct: 61 WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIAHLMAMLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L YE H I A V+V Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264 >gi|237713988|ref|ZP_04544469.1| thymidylate synthase [Bacteroides sp. D1] gi|262407040|ref|ZP_06083589.1| thymidylate synthase [Bacteroides sp. 2_1_22] gi|294809774|ref|ZP_06768458.1| thymidylate synthase [Bacteroides xylanisolvens SD CC 1b] gi|298479700|ref|ZP_06997900.1| thymidylate synthase [Bacteroides sp. D22] gi|229445812|gb|EEO51603.1| thymidylate synthase [Bacteroides sp. D1] gi|262355743|gb|EEZ04834.1| thymidylate synthase [Bacteroides sp. 2_1_22] gi|294443014|gb|EFG11797.1| thymidylate synthase [Bacteroides xylanisolvens SD CC 1b] gi|295084876|emb|CBK66399.1| thymidylate synthase [Bacteroides xylanisolvens XB1A] gi|298274090|gb|EFI15651.1| thymidylate synthase [Bacteroides sp. D22] Length = 264 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISIFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG +YG QWRSWPDY+G IDQIS +V++L+ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV +G+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HT GD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264 >gi|284799616|ref|ZP_05984412.2| thymidylate synthase [Neisseria subflava NJ9703] gi|284797529|gb|EFC52876.1| thymidylate synthase [Neisseria subflava NJ9703] Length = 303 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV+ G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL Sbjct: 40 MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 99 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 100 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 159 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 160 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 219 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR R LP M INP + DL Sbjct: 220 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRKLPTMKINPEVKDLF 279 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 280 AFKFEDFELEGYDPHPHIKAAVSV 303 >gi|327395047|dbj|BAK12469.1| thymidylate synthase ThyA [Pantoea ananatis AJ13355] Length = 264 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R+V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMRYVLNEGTPKSDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD+ G LGP+YG QWRSW G IDQI+ +++ L+ Sbjct: 61 WFLQGDTNIGYLKENNVSIWDEWADEQGNLGPVYGKQWRSWGTASGQEIDQITKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RDPDSRRIIVSAWNVGELDEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQA LQL+R PR LP ++I L Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPTLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH AI A V+V Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAV 264 >gi|110637694|ref|YP_677901.1| thymidylate synthase [Cytophaga hutchinsonii ATCC 33406] gi|123163654|sp|Q11VK5|TYSY_CYTH3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|110280375|gb|ABG58561.1| thymidylate synthase [Cytophaga hutchinsonii ATCC 33406] Length = 264 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++H++ G + DRTG GT S FGYQMRF+L +GFPLLTTKK+H +S+ HELL Sbjct: 1 MKQYHDLMQHILDQGVKKEDRTGTGTVSVFGYQMRFNLQEGFPLLTTKKLHMRSITHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G LGP+YG QWRSWP DG IDQI+++V ++ Sbjct: 61 WFLQGDTNIKYLKDNNVSIWDEWADENGNLGPVYGYQWRSWPTPDGKHIDQITNVVNMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I+KM LPPCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPDSRRLIVSAWNVGEIEKMKLPPCHAFFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q G+F+HTLGD HLY+NH EQA LQLSR R LP M INP++ + Sbjct: 181 YALLTMMVAQVCGLQAGDFVHTLGDAHLYSNHLEQAKLQLSRDFRPLPAMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL Y+PH I A V+V Sbjct: 241 DFKFEDFTLEGYDPHPHIKAAVAV 264 >gi|146309227|ref|YP_001189692.1| thymidylate synthase [Pseudomonas mendocina ymp] gi|166231725|sp|A4Y044|TYSY_PSEMY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145577428|gb|ABP86960.1| thymidylate synthase [Pseudomonas mendocina ymp] Length = 264 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFP++TTKK H +S++HELL Sbjct: 1 MKQYLDLMRHVREHGTFKEDRTGTGTYSVFGYQMRFDLADGFPIVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP +G IDQI+ +++ +R Sbjct: 61 WFLQGDTNIKYLKDNGVSIWDEWADENGDLGPVYGYQWRSWPAPNGESIDQIAKLIEMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V Q GEFI T GD HLY NH EQADLQL+R P LP M +NP + DLL Sbjct: 181 YALLTLMVAQVCDLQPGEFIWTGGDCHLYANHIEQADLQLTRQPLPLPTMKLNPEVKDLL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE H I A V+V Sbjct: 241 AFRFEDFELVGYEAHPHIKAPVAV 264 >gi|254470038|ref|ZP_05083442.1| thymidylate synthase [Pseudovibrio sp. JE062] gi|211960349|gb|EEA95545.1| thymidylate synthase [Pseudovibrio sp. JE062] Length = 264 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+R ++ G + DRTG GT+S FG+QMRF+LS+GFP++TTKK+H +S++HELL Sbjct: 1 MQQYLELMRRIMDEGVVKEDRTGTGTKSVFGHQMRFNLSEGFPVVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + V IWDEWAD++G+LGP+YG QWRSWP DG+ IDQI+++VQ ++ Sbjct: 61 WFLAGDTNIKYLKDNKVRIWDEWADENGDLGPVYGYQWRSWPKPDGSSIDQIANVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D MALPPCH LFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNPALVDDMALPPCHSLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+F+HTLGD HLY NH EQA+LQLSR PR LP M INP + D+ Sbjct: 181 YALLTMMIAQVCDLEPGDFVHTLGDAHLYLNHMEQAELQLSREPRALPVMRINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF L Y+PH I V+V Sbjct: 241 AFRYEDFALEGYDPHPHIKGVVAV 264 >gi|160882708|ref|ZP_02063711.1| hypothetical protein BACOVA_00666 [Bacteroides ovatus ATCC 8483] gi|156111878|gb|EDO13623.1| hypothetical protein BACOVA_00666 [Bacteroides ovatus ATCC 8483] Length = 264 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+ + DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTKKDDRTGTGTISIFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG IYG QWRSWPDY+G IDQIS +V++++ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISEVVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV +G+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HT GD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMRINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264 >gi|15965880|ref|NP_386233.1| thymidylate synthase [Sinorhizobium meliloti 1021] gi|307309638|ref|ZP_07589291.1| thymidylate synthase [Sinorhizobium meliloti BL225C] gi|307321777|ref|ZP_07601165.1| thymidylate synthase [Sinorhizobium meliloti AK83] gi|22096227|sp|Q92NQ5|TYSY_RHIME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|15075149|emb|CAC46706.1| Probable thymidylate synthase [Sinorhizobium meliloti 1021] gi|306892599|gb|EFN23397.1| thymidylate synthase [Sinorhizobium meliloti AK83] gi|306899973|gb|EFN30595.1| thymidylate synthase [Sinorhizobium meliloti BL225C] Length = 264 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 184/264 (69%), Positives = 223/264 (84%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HVI G+DR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL Sbjct: 1 MRQYLDLLEHVITTGTDRGDRTGTGTRSVFGYQMRFDLSQGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV+YL +GVSIWDEWAD++GELGP+YG QWRSWP DG IDQI+++V+ L+ Sbjct: 61 WFLRGDTNVAYLKDNGVSIWDEWADENGELGPVYGYQWRSWPTPDGRHIDQIAALVEGLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NHFEQA LQL+R+P+ LP+M INP + D+ Sbjct: 181 YALLTMMVAQVTGLEAGDFVHTLGDAHIYRNHFEQAQLQLTRTPKPLPKMEINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFR+EDF L YE + I A V+V Sbjct: 241 SFRFEDFELVGYEADSHIKAPVAV 264 >gi|238896342|ref|YP_002921078.1| thymidylate synthase [Klebsiella pneumoniae NTUH-K2044] gi|262039838|ref|ZP_06013112.1| thymidylate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330009185|ref|ZP_08306468.1| thymidylate synthase [Klebsiella sp. MS 92-3] gi|238548660|dbj|BAH65011.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259042807|gb|EEW43804.1| thymidylate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534871|gb|EGF61409.1| thymidylate synthase [Klebsiella sp. MS 92-3] Length = 264 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 157/264 (59%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP DG IDQIS+++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQISTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I + Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|49083028|gb|AAT50914.1| PA0342 [synthetic construct] Length = 265 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 175/264 (66%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G+ + D TG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL Sbjct: 1 MKQYLDLMRHVREHGTFKSDCTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ L+ Sbjct: 61 WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMAMLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P LP M +NP + DL Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L YE H I A V+V Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264 >gi|87307092|ref|ZP_01089238.1| thymidylate synthase [Blastopirellula marina DSM 3645] gi|87290465|gb|EAQ82353.1| thymidylate synthase [Blastopirellula marina DSM 3645] Length = 264 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G + DRTG GT S FG+QMRF L+ GFP +TTKK+H +S++HELL Sbjct: 1 MRQYLDLMQRILDEGVRKEDRTGTGTLSIFGHQMRFRLADGFPAVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV+YL + VSIWDEWAD+ GELGP+YG QWRSWP DG IDQI+++++ ++ Sbjct: 61 WFLQGATNVAYLRENKVSIWDEWADEAGELGPVYGYQWRSWPTPDGGHIDQITNLIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA + +M LPPCH LFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVADVPRMKLPPCHLLFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HT GD HLY NH +Q LQLSR PR LP M INP + DLL Sbjct: 181 YALLTMMVAQVTGLEPGDFVHTFGDAHLYTNHMDQTQLQLSREPRPLPTMRINPAVTDLL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L +Y+PH I A V+V Sbjct: 241 KFRFEDFELINYDPHPHISAPVAV 264 >gi|329296900|ref|ZP_08254236.1| thymidylate synthase [Plautia stali symbiont] Length = 264 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+++ DRTG GT S FG+QMRF+L GFPL+TTKKVH +S++HELL Sbjct: 1 MKQYLDLMQHVLNEGAEKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKVHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+++ YL + V+IWDEWAD++G+LGP+YG QWRSW G IDQIS +++ L+ Sbjct: 61 WFLKGDTSIGYLKENKVTIWDEWADENGDLGPVYGKQWRSWGKASGEEIDQISKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL+R PR LP+++I + Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH AI A V+V Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264 >gi|325266347|ref|ZP_08133025.1| thymidylate synthase [Kingella denitrificans ATCC 33394] gi|324982140|gb|EGC17774.1| thymidylate synthase [Kingella denitrificans ATCC 33394] Length = 264 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 174/264 (65%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV+ G+D+ DRTG GTRS FGYQMRF+L+ GFP+LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLQHVLDNGTDKSDRTGTGTRSVFGYQMRFNLADGFPVLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G+LG +YG QWRSW DG +DQI+++V+ +R Sbjct: 61 WFLAGDTNIRYLKENGVRIWDEWADENGDLGRVYGAQWRSWRGADGETVDQIANVVRQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A +D MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QTPDSRRLIVSAWNPAEVDDMALPPCHALFQFYVANGQLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q GEF+HTLGD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLTMMVAQVCGLQAGEFVHTLGDAHLYQNHLEQARLQLTREPRALPKMHINPDVRDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+++DFTL Y+PH I A+VSV Sbjct: 241 AFKFDDFTLSDYDPHPHIKAEVSV 264 >gi|152971755|ref|YP_001336864.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166231708|sp|A6TDG3|TYSY_KLEP7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|150956604|gb|ABR78634.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 264 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I + Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|75676536|ref|YP_318957.1| thymidylate synthase [Nitrobacter winogradskyi Nb-255] gi|123773189|sp|Q3SQ36|TYSY_NITWN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|74421406|gb|ABA05605.1| thymidylate synthase [Nitrobacter winogradskyi Nb-255] Length = 264 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+QY DLL ++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+ ++S+VHELL Sbjct: 1 MNQYHDLLERILGEGTEKHDRTGTGTLSVFGHQMRFDLASGFPMLTTKKLPFRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ YL +GVSIWDEWAD +G+LGP+YG QWRSWP DG IDQI++++ ++ Sbjct: 61 WFLRGETNIKYLKDNGVSIWDEWADANGDLGPVYGSQWRSWPARDGRGIDQIANVIDLIQ 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADVDRMALPPCHCLFQFYVAGGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+H+LGD HLY+NH +QA LQLSR R LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHLDQARLQLSRPTRPLPTMTINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF L +Y+PH I A+V+V Sbjct: 241 AFRYEDFRLENYDPHPHIKAEVAV 264 >gi|288554022|ref|YP_003425957.1| thymidylate synthase [Bacillus pseudofirmus OF4] gi|288545182|gb|ADC49065.1| thymidylate synthase [Bacillus pseudofirmus OF4] Length = 264 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L HV+K G + DRTG GT STFGYQMRFDL++GFP LTTKK+H +S++HELL Sbjct: 1 MDQYLALCEHVLKNGETKSDRTGTGTISTFGYQMRFDLAEGFPALTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IW+EWAD++G+LGP+YG QWRSW +G V+DQIS +++ ++ Sbjct: 61 WFLKGDTNIGYLKENNVRIWNEWADENGDLGPVYGKQWRSWEGANGKVVDQISELIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ID+MAL PCHCLFQFYV++GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRLIVSAWNPAEIDEMALAPCHCLFQFYVNDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEF+HT GD H+Y+NH EQ LQL+R PR LP+M IN + + Sbjct: 181 YALLTMMIAQVTDLEPGEFVHTFGDAHIYSNHVEQVKLQLTREPRALPKMKINKEVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F EDF L Y+PH I +VSV Sbjct: 241 DFTIEDFELTDYDPHPHIKGEVSV 264 >gi|39936555|ref|NP_948831.1| thymidylate synthase [Rhodopseudomonas palustris CGA009] gi|62901322|sp|Q6N447|TYSY_RHOPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|39650411|emb|CAE28934.1| thymidylate synthase [Rhodopseudomonas palustris CGA009] Length = 264 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 172/264 (65%), Positives = 216/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL ++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTK++ K++VHELL Sbjct: 1 MIQYQDLLERILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGGSIDQIANVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLMVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEF+HTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ Sbjct: 181 YALLTLMVAQVTGLKPGEFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDFTL Y+PH I A+V+V Sbjct: 241 GFRYEDFTLTGYDPHPHIKAEVAV 264 >gi|153808882|ref|ZP_01961550.1| hypothetical protein BACCAC_03183 [Bacteroides caccae ATCC 43185] gi|149128708|gb|EDM19926.1| hypothetical protein BACCAC_03183 [Bacteroides caccae ATCC 43185] Length = 264 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG IYG QWRSWPDY+G IDQIS +++++ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV +G+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 QNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HT GD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFKFEDFELVNYDPHPHIAGVVAV 264 >gi|317049336|ref|YP_004116984.1| thymidylate synthase [Pantoea sp. At-9b] gi|316950953|gb|ADU70428.1| thymidylate synthase [Pantoea sp. At-9b] Length = 264 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+++ DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMQHVLNEGAEKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V+IWDEWAD++G+LGP+YG QWRSW + +G IDQIS +++ L+ Sbjct: 61 WFLQGDTNIGYLKDNKVTIWDEWADENGDLGPVYGKQWRSWGNANGEQIDQISRVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL+R PR LP++II + Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLIIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+PH AI A V++ Sbjct: 241 DYQFEDFEIEGYDPHPAIKAPVAI 264 >gi|322831560|ref|YP_004211587.1| thymidylate synthase [Rahnella sp. Y9602] gi|321166761|gb|ADW72460.1| thymidylate synthase [Rahnella sp. Y9602] Length = 264 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMQKVLDEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ++S+V+ L+ Sbjct: 61 WFLKGETNIAYLRENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLASVVEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+PH AI A V++ Sbjct: 241 DYNFEDFEIEGYDPHPAIKAPVAI 264 >gi|323978558|gb|EGB73640.1| thymidylate synthase [Escherichia coli TW10509] Length = 264 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q +LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTNLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|146312910|ref|YP_001177984.1| thymidylate synthase [Enterobacter sp. 638] gi|166991230|sp|A4WE03|TYSY_ENT38 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145319786|gb|ABP61933.1| thymidylate synthase [Enterobacter sp. 638] Length = 264 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL + VSIWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLRENNVSIWDEWADENGNLGPVYGHQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|304396692|ref|ZP_07378572.1| thymidylate synthase [Pantoea sp. aB] gi|304355488|gb|EFM19855.1| thymidylate synthase [Pantoea sp. aB] Length = 264 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMQHVLHEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + VSIWDEWAD++G+LGP+YG QWRSW G IDQ+S +++ L+ Sbjct: 61 WFLKGDTNIAYLRENKVSIWDEWADENGDLGPVYGKQWRSWGTASGQEIDQLSQVMEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV + +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RDPDSRRIIVSAWNVGELSEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQA LQL+R PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH AI A V+V Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264 >gi|161611264|ref|YP_295138.2| thymidylate synthase [Ralstonia eutropha JMP134] Length = 264 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDLS+GFP++TTKK+H KS++ ELL Sbjct: 1 MKQYLDFMRHVFEHGTEKADRTGTGTRSVFGYQMRFDLSQGFPVVTTKKLHLKSIILELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GVSIWDEWAD++GELGP+YG QWRSWP DG +DQI+ ++ +R Sbjct: 61 WFLQGSTNVRWLQENGVSIWDEWADENGELGPVYGSQWRSWPTPDGRHVDQITDLLNQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ENPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD H+Y+NH+EQ QLSR P LP + I + Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHIYSNHYEQVQTQLSREPLPLPTLKIVRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF L Y+ H AI A V+V Sbjct: 241 DYRYEDFELVGYQSHPAIKAPVAV 264 >gi|283786527|ref|YP_003366392.1| thymidylate synthase [Citrobacter rodentium ICC168] gi|282949981|emb|CBG89609.1| thymidylate synthase [Citrobacter rodentium ICC168] Length = 264 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTKKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI+++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVMKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHLEQTRLQLSREPRALPKLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|237729788|ref|ZP_04560269.1| thymidylate synthetase [Citrobacter sp. 30_2] gi|226908394|gb|EEH94312.1| thymidylate synthetase [Citrobacter sp. 30_2] Length = 264 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|300776697|ref|ZP_07086555.1| thymidylate synthase B [Chryseobacterium gleum ATCC 35910] gi|300502207|gb|EFK33347.1| thymidylate synthase B [Chryseobacterium gleum ATCC 35910] Length = 264 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL Sbjct: 1 MQNYLDLLQHILDNGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSW DG V+DQI+ ++ ++ Sbjct: 61 WFLKGDTNIKYLKDNGVSIWDEWADENGDLGPVYGAQWRSWSGADGKVVDQITEVIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I MAL PCH LFQFYV +GKLS QLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNVAEIPNMALAPCHALFQFYVADGKLSLQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V + G+++H+ GDVH+YNNHFEQ + QL+R PR LP M +NP++ ++ Sbjct: 181 YALLLMMVAQVCELEVGDYVHSFGDVHIYNNHFEQVNRQLAREPRALPTMKLNPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDFTL +Y+PH I A V++ Sbjct: 241 DFDFEDFTLENYDPHPGIKAPVAI 264 >gi|20455513|sp|O33380|TYSY_NEIGO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 265 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 176/265 (66%), Positives = 213/265 (80%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GT S FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYLDLMRHVLDNGTDKSDRTGTGTLSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWD-EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 WFL+GD+N+ YL + VSIWD EWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQI 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G LSCQLYQRS D+FLG+PFNIA Sbjct: 121 KKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGNLSCQLYQRSADIFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 181 SYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDL 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 241 FAFKFEDFELEGYDPHPHIKAVVSV 265 >gi|332970396|gb|EGK09388.1| thymidylate synthase [Kingella kingae ATCC 23330] Length = 264 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++HV+ G+D+ DRTG GTRS FGYQMRF+L+ GFP+LTTKK+H KS++HELL Sbjct: 1 MKPYLDLMQHVLAHGNDKSDRTGTGTRSVFGYQMRFNLADGFPVLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IWDEWAD++G LG +YG QWRSW +G IDQI+++V+ ++ Sbjct: 61 WFLQGDTNIRYLQENGVKIWDEWADENGNLGRVYGAQWRSWRGANGETIDQIANLVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPAEVDDMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMMLA V G Q GEF+HTLGD HLY NH EQA LQLSR PR+LP+M INPN+ D+ Sbjct: 181 YALLTMMLAQVCGLQAGEFVHTLGDAHLYRNHLEQAQLQLSREPRSLPKMRINPNVQDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++DF L Y+PH I A VSV Sbjct: 241 AFTFDDFELVDYDPHPHIKADVSV 264 >gi|149196226|ref|ZP_01873281.1| thymidylate synthase [Lentisphaera araneosa HTCC2155] gi|149140487|gb|EDM28885.1| thymidylate synthase [Lentisphaera araneosa HTCC2155] Length = 264 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HVIK G D+ DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLLDHVIKNGVDKSDRTGTGTRSVFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G LGP+YG QWRSW DG IDQI+ ++++++ Sbjct: 61 WFLTGDTNIKYLKDNGVSIWDEWADEEGNLGPVYGYQWRSWKTPDGRTIDQIAQLIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV+ +D MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TKPDSRRLIVSAWNVSDVDNMALPPCHSLFQFYVADNKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V +YG+F+HT GD H+Y+NHFEQA LQLSR R LP M INP++ D+ Sbjct: 181 YALLTMMVAQVCDLEYGDFVHTFGDAHIYSNHFEQAKLQLSRDTRPLPTMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF +EDFTL Y+PH I A V++ Sbjct: 241 SFTFEDFTLEGYDPHPHIKAPVAI 264 >gi|206577831|ref|YP_002236751.1| thymidylate synthase [Klebsiella pneumoniae 342] gi|288933717|ref|YP_003437776.1| thymidylate synthase [Klebsiella variicola At-22] gi|290511203|ref|ZP_06550572.1| thymidylate synthase [Klebsiella sp. 1_1_55] gi|206566889|gb|ACI08665.1| thymidylate synthase [Klebsiella pneumoniae 342] gi|288888446|gb|ADC56764.1| thymidylate synthase [Klebsiella variicola At-22] gi|289776196|gb|EFD84195.1| thymidylate synthase [Klebsiella sp. 1_1_55] Length = 264 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHDNNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I + Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|238021900|ref|ZP_04602326.1| hypothetical protein GCWU000324_01804 [Kingella oralis ATCC 51147] gi|237866514|gb|EEP67556.1| hypothetical protein GCWU000324_01804 [Kingella oralis ATCC 51147] Length = 264 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV++ G + DRTG GTRS FGYQMRFDLS+GFP LTTKK+H KS++HELL Sbjct: 1 MQQYLDLMRHVLQNGVTKSDRTGTGTRSVFGYQMRFDLSQGFPALTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G+LG +YG QWRSW +G IDQI ++VQ ++ Sbjct: 61 WFLSGDTNIRYLKENGVRIWDEWADENGDLGRVYGAQWRSWRGANGETIDQIRNLVQQIQ 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNPAEVDSMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMMLA V G Q GEFIHTLGD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLTMMLAQVCGLQAGEFIHTLGDAHLYLNHLEQAQLQLTREPRPLPKMHINPDVRDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR++DF L Y+PH I A+VSV Sbjct: 241 AFRFDDFELADYDPHPHIKAQVSV 264 >gi|1065359|pdb|1TLC|A Chain A, Thymidylate Synthase Complexed With Dgmp And Folate Analog 1843u89 gi|1065360|pdb|1TLC|B Chain B, Thymidylate Synthase Complexed With Dgmp And Folate Analog 1843u89 gi|1310775|pdb|1TSD|A Chain A, Thymidylate Synthase Complex With 2'-Deoxyuridine 5'- Monophosphate (Dump) And Folate Analog 1843u89 gi|1310776|pdb|1TSD|B Chain B, Thymidylate Synthase Complex With 2'-Deoxyuridine 5'- Monophosphate (Dump) And Folate Analog 1843u89 gi|3318670|pdb|1DDU|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717 And 2', 5'-Dideoxyuridine (Ddurd) gi|3318671|pdb|1DDU|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717 And 2', 5'-Dideoxyuridine (Ddurd) gi|3318685|pdb|1TDU|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717 And 2'- Deoxyuridine (Durd) gi|3318686|pdb|1TDU|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717 And 2'- Deoxyuridine (Durd) gi|3318724|pdb|1AN5|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717 gi|3318725|pdb|1AN5|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717 gi|3891613|pdb|1AXW|A Chain A, E. Coli Thymidylate Synthase In Complex With Methotrexate (Mtx) And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|3891614|pdb|1AXW|B Chain B, E. Coli Thymidylate Synthase In Complex With Methotrexate (Mtx) And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|157829994|pdb|1AOB|A Chain A, E. Coli Thymidylate Synthase Complexed With Ddurd gi|157830243|pdb|1BDU|A Chain A, E. Coli Thymidylate Synthase Complexed With Durd gi|157830328|pdb|1BID|A Chain A, E. Coli Thymidylate Synthase Complexed With Dump gi|157833963|pdb|1TJS|A Chain A, E. Coli Thymidylate Synthase gi|157834008|pdb|1TRG|A Chain A, E. Coli Thymidylate Synthase In Symmetric Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|157880165|pdb|1SYN|A Chain A, E. Coli Thymidylate Synthase In Complex With Bw1843u89 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|157880166|pdb|1SYN|B Chain B, E. Coli Thymidylate Synthase In Complex With Bw1843u89 And 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 265 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 2 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 122 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 181 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 241 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 DYRFEDFEIEGYDPHPGIKAPVAI 265 >gi|15803346|ref|NP_289379.1| thymidylate synthase [Escherichia coli O157:H7 EDL933] gi|15832938|ref|NP_311711.1| thymidylate synthase [Escherichia coli O157:H7 str. Sakai] gi|16130731|ref|NP_417304.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655] gi|26249257|ref|NP_755297.1| thymidylate synthase [Escherichia coli CFT073] gi|74313395|ref|YP_311814.1| thymidylate synthase [Shigella sonnei Ss046] gi|89109610|ref|AP_003390.1| thymidylate synthetase [Escherichia coli str. K-12 substr. W3110] gi|91212223|ref|YP_542209.1| thymidylate synthase [Escherichia coli UTI89] gi|110642995|ref|YP_670725.1| thymidylate synthase [Escherichia coli 536] gi|117625080|ref|YP_854068.1| thymidylate synthase [Escherichia coli APEC O1] gi|157156066|ref|YP_001464162.1| thymidylate synthase [Escherichia coli E24377A] gi|168751042|ref|ZP_02776064.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4113] gi|168758211|ref|ZP_02783218.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4401] gi|168764657|ref|ZP_02789664.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4501] gi|168766799|ref|ZP_02791806.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4486] gi|168777651|ref|ZP_02802658.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4196] gi|168778820|ref|ZP_02803827.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4076] gi|168788090|ref|ZP_02813097.1| thymidylate synthase [Escherichia coli O157:H7 str. EC869] gi|168801690|ref|ZP_02826697.1| thymidylate synthase [Escherichia coli O157:H7 str. EC508] gi|170082395|ref|YP_001731715.1| thymidylate synthetase [Escherichia coli str. K-12 substr. DH10B] gi|170684262|ref|YP_001744995.1| thymidylate synthase [Escherichia coli SMS-3-5] gi|170765924|ref|ZP_02900735.1| thymidylate synthase [Escherichia albertii TW07627] gi|188494993|ref|ZP_03002263.1| thymidylate synthase [Escherichia coli 53638] gi|191168602|ref|ZP_03030385.1| thymidylate synthase [Escherichia coli B7A] gi|191171260|ref|ZP_03032810.1| thymidylate synthase [Escherichia coli F11] gi|193065099|ref|ZP_03046173.1| thymidylate synthase [Escherichia coli E22] gi|193071410|ref|ZP_03052325.1| thymidylate synthase [Escherichia coli E110019] gi|194426405|ref|ZP_03058960.1| thymidylate synthase [Escherichia coli B171] gi|194434328|ref|ZP_03066592.1| thymidylate synthase [Shigella dysenteriae 1012] gi|195936429|ref|ZP_03081811.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4024] gi|208806510|ref|ZP_03248847.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4206] gi|208814146|ref|ZP_03255475.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4045] gi|208818648|ref|ZP_03258968.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4042] gi|209400848|ref|YP_002272290.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4115] gi|209920275|ref|YP_002294359.1| thymidylate synthase [Escherichia coli SE11] gi|215488145|ref|YP_002330576.1| thymidylate synthase [Escherichia coli O127:H6 str. E2348/69] gi|217327216|ref|ZP_03443299.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14588] gi|218555376|ref|YP_002388289.1| thymidylate synthase [Escherichia coli IAI1] gi|218559839|ref|YP_002392752.1| thymidylate synthase [Escherichia coli S88] gi|218690953|ref|YP_002399165.1| thymidylate synthase [Escherichia coli ED1a] gi|218696423|ref|YP_002404090.1| thymidylate synthase [Escherichia coli 55989] gi|218701541|ref|YP_002409170.1| thymidylate synthase [Escherichia coli IAI39] gi|218706321|ref|YP_002413840.1| thymidylate synthase [Escherichia coli UMN026] gi|227888391|ref|ZP_04006196.1| thymidylate synthase [Escherichia coli 83972] gi|237706513|ref|ZP_04536994.1| thymidylate synthetase [Escherichia sp. 3_2_53FAA] gi|238901962|ref|YP_002927758.1| thymidylate synthetase [Escherichia coli BW2952] gi|254037878|ref|ZP_04871936.1| thymidylate synthetase [Escherichia sp. 1_1_43] gi|254794765|ref|YP_003079602.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14359] gi|256024671|ref|ZP_05438536.1| thymidylate synthase [Escherichia sp. 4_1_40B] gi|260845489|ref|YP_003223267.1| thymidylate synthetase ThyA [Escherichia coli O103:H2 str. 12009] gi|260856939|ref|YP_003230830.1| thymidylate synthetase ThyA [Escherichia coli O26:H11 str. 11368] gi|260869506|ref|YP_003235908.1| thymidylate synthetase ThyA [Escherichia coli O111:H- str. 11128] gi|261226126|ref|ZP_05940407.1| thymidylate synthetase [Escherichia coli O157:H7 str. FRIK2000] gi|261256618|ref|ZP_05949151.1| thymidylate synthetase ThyA [Escherichia coli O157:H7 str. FRIK966] gi|291284153|ref|YP_003500971.1| Thymidylate synthase [Escherichia coli O55:H7 str. CB9615] gi|293406316|ref|ZP_06650242.1| thymidylate synthase [Escherichia coli FVEC1412] gi|293412172|ref|ZP_06654895.1| thymidylate synthase [Escherichia coli B354] gi|293416071|ref|ZP_06658711.1| thymidylate synthase [Escherichia coli B185] gi|293449151|ref|ZP_06663572.1| thymidylate synthase [Escherichia coli B088] gi|298382052|ref|ZP_06991649.1| thyA [Escherichia coli FVEC1302] gi|300815754|ref|ZP_07095978.1| thymidylate synthase [Escherichia coli MS 107-1] gi|300820616|ref|ZP_07100767.1| thymidylate synthase [Escherichia coli MS 119-7] gi|300898112|ref|ZP_07116478.1| thymidylate synthase [Escherichia coli MS 198-1] gi|300906645|ref|ZP_07124334.1| thymidylate synthase [Escherichia coli MS 84-1] gi|300920317|ref|ZP_07136755.1| thymidylate synthase [Escherichia coli MS 115-1] gi|300923189|ref|ZP_07139244.1| thymidylate synthase [Escherichia coli MS 182-1] gi|300936248|ref|ZP_07151181.1| thymidylate synthase [Escherichia coli MS 21-1] gi|300950561|ref|ZP_07164468.1| thymidylate synthase [Escherichia coli MS 116-1] gi|300958146|ref|ZP_07170303.1| thymidylate synthase [Escherichia coli MS 175-1] gi|300980528|ref|ZP_07175054.1| thymidylate synthase [Escherichia coli MS 45-1] gi|300995837|ref|ZP_07181269.1| thymidylate synthase [Escherichia coli MS 200-1] gi|301026203|ref|ZP_07189669.1| thymidylate synthase [Escherichia coli MS 196-1] gi|301027499|ref|ZP_07190836.1| thymidylate synthase [Escherichia coli MS 69-1] gi|301049380|ref|ZP_07196344.1| thymidylate synthase [Escherichia coli MS 185-1] gi|301302964|ref|ZP_07209091.1| thymidylate synthase [Escherichia coli MS 124-1] gi|301326156|ref|ZP_07219542.1| thymidylate synthase [Escherichia coli MS 78-1] gi|301645205|ref|ZP_07245158.1| thymidylate synthase [Escherichia coli MS 146-1] gi|306812269|ref|ZP_07446467.1| thymidylate synthase [Escherichia coli NC101] gi|307139511|ref|ZP_07498867.1| thymidylate synthase [Escherichia coli H736] gi|307310563|ref|ZP_07590211.1| thymidylate synthase [Escherichia coli W] gi|309793875|ref|ZP_07688300.1| thymidylate synthase [Escherichia coli MS 145-7] gi|331643512|ref|ZP_08344643.1| thymidylate synthase [Escherichia coli H736] gi|331648587|ref|ZP_08349675.1| thymidylate synthase [Escherichia coli M605] gi|331658975|ref|ZP_08359917.1| thymidylate synthase [Escherichia coli TA206] gi|331664389|ref|ZP_08365295.1| thymidylate synthase [Escherichia coli TA143] gi|331669559|ref|ZP_08370405.1| thymidylate synthase [Escherichia coli TA271] gi|331674312|ref|ZP_08375072.1| thymidylate synthase [Escherichia coli TA280] gi|331678805|ref|ZP_08379479.1| thymidylate synthase [Escherichia coli H591] gi|331684470|ref|ZP_08385062.1| thymidylate synthase [Escherichia coli H299] gi|67474758|sp|P0A884|TYSY_ECOLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|67474759|sp|P0A885|TYSY_ECOL6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|67474760|sp|P0A886|TYSY_ECO57 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123048907|sp|Q0TE05|TYSY_ECOL5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123266005|sp|Q1R7I6|TYSY_ECOUT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123759566|sp|Q3YY33|TYSY_SHISS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231697|sp|A1AF39|TYSY_ECOK1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166991228|sp|A7ZQT3|TYSY_ECO24 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713166|sp|B7MLH3|TYSY_ECO45 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713167|sp|B7NVX2|TYSY_ECO7I RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713168|sp|B7LY83|TYSY_ECO8A RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713169|sp|B7N759|TYSY_ECOLU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790236|sp|B7UHP4|TYSY_ECO27 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790237|sp|B7LF04|TYSY_ECO55 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790238|sp|B7MZC6|TYSY_ECO81 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|259550774|sp|C4ZZX9|TYSY_ECOBW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|494741|pdb|2BBQ|A Chain A, Structural Basis For Recognition Of Polyglutamyl Folates By Thymidylate Synthase gi|494742|pdb|2BBQ|B Chain B, Structural Basis For Recognition Of Polyglutamyl Folates By Thymidylate Synthase gi|2781311|pdb|2KCE|A Chain A, Binding Of The Anticancer Drug Zd1694 To E. Coli Thymidylate Synthase: Assessing Specificity And Affinity gi|2781312|pdb|2KCE|B Chain B, Binding Of The Anticancer Drug Zd1694 To E. Coli Thymidylate Synthase: Assessing Specificity And Affinity gi|157836897|pdb|3TMS|A Chain A, Plastic Adaptation Toward Mutations In Proteins: Structural Comparison Of Thymidylate Synthases gi|12517312|gb|AAG57938.1|AE005511_6 thymidylate synthetase [Escherichia coli O157:H7 str. EDL933] gi|26109664|gb|AAN81867.1|AE016765_269 Thymidylate synthase [Escherichia coli CFT073] gi|147987|gb|AAA24675.1| thymidylate synthase [Escherichia coli] gi|1789191|gb|AAC75866.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655] gi|13363156|dbj|BAB37107.1| thymidylate synthetase [Escherichia coli O157:H7 str. Sakai] gi|73856872|gb|AAZ89579.1| thymidylate synthetase [Shigella sonnei Ss046] gi|85675643|dbj|BAE76896.1| thymidylate synthetase [Escherichia coli str. K12 substr. W3110] gi|91073797|gb|ABE08678.1| thymidylate synthetase [Escherichia coli UTI89] gi|110344587|gb|ABG70824.1| thymidylate synthase [Escherichia coli 536] gi|115514204|gb|ABJ02279.1| thymidylate synthetase [Escherichia coli APEC O1] gi|157078096|gb|ABV17804.1| thymidylate synthase [Escherichia coli E24377A] gi|169890230|gb|ACB03937.1| thymidylate synthetase [Escherichia coli str. K-12 substr. DH10B] gi|170125070|gb|EDS94001.1| thymidylate synthase [Escherichia albertii TW07627] gi|170521980|gb|ACB20158.1| thymidylate synthase [Escherichia coli SMS-3-5] gi|187767149|gb|EDU30993.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4196] gi|188014880|gb|EDU53002.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4113] gi|188490192|gb|EDU65295.1| thymidylate synthase [Escherichia coli 53638] gi|189003343|gb|EDU72329.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4076] gi|189354949|gb|EDU73368.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4401] gi|189363818|gb|EDU82237.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4486] gi|189365398|gb|EDU83814.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4501] gi|189372183|gb|EDU90599.1| thymidylate synthase [Escherichia coli O157:H7 str. EC869] gi|189376199|gb|EDU94615.1| thymidylate synthase [Escherichia coli O157:H7 str. EC508] gi|190901348|gb|EDV61114.1| thymidylate synthase [Escherichia coli B7A] gi|190908560|gb|EDV68149.1| thymidylate synthase [Escherichia coli F11] gi|192927230|gb|EDV81850.1| thymidylate synthase [Escherichia coli E22] gi|192955272|gb|EDV85760.1| thymidylate synthase [Escherichia coli E110019] gi|194415713|gb|EDX31980.1| thymidylate synthase [Escherichia coli B171] gi|194417391|gb|EDX33496.1| thymidylate synthase [Shigella dysenteriae 1012] gi|208726311|gb|EDZ75912.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4206] gi|208735423|gb|EDZ84110.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4045] gi|208738771|gb|EDZ86453.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4042] gi|209162248|gb|ACI39681.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4115] gi|209761050|gb|ACI78837.1| thymidylate synthetase [Escherichia coli] gi|209761052|gb|ACI78838.1| thymidylate synthetase [Escherichia coli] gi|209761054|gb|ACI78839.1| thymidylate synthetase [Escherichia coli] gi|209761056|gb|ACI78840.1| thymidylate synthetase [Escherichia coli] gi|209913534|dbj|BAG78608.1| thymidylate synthase [Escherichia coli SE11] gi|215266217|emb|CAS10644.1| thymidylate synthetase [Escherichia coli O127:H6 str. E2348/69] gi|217319583|gb|EEC28008.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14588] gi|218353155|emb|CAU99013.1| thymidylate synthetase [Escherichia coli 55989] gi|218362144|emb|CAQ99753.1| thymidylate synthetase [Escherichia coli IAI1] gi|218366608|emb|CAR04362.1| thymidylate synthetase [Escherichia coli S88] gi|218371527|emb|CAR19365.1| thymidylate synthetase [Escherichia coli IAI39] gi|218428517|emb|CAR09443.2| thymidylate synthetase [Escherichia coli ED1a] gi|218433418|emb|CAR14320.1| thymidylate synthetase [Escherichia coli UMN026] gi|222034541|emb|CAP77283.1| Thymidylate synthase [Escherichia coli LF82] gi|226839502|gb|EEH71523.1| thymidylate synthetase [Escherichia sp. 1_1_43] gi|226899553|gb|EEH85812.1| thymidylate synthetase [Escherichia sp. 3_2_53FAA] gi|227834660|gb|EEJ45126.1| thymidylate synthase [Escherichia coli 83972] gi|238863661|gb|ACR65659.1| thymidylate synthetase [Escherichia coli BW2952] gi|254594165|gb|ACT73526.1| thymidylate synthetase [Escherichia coli O157:H7 str. TW14359] gi|257755588|dbj|BAI27090.1| thymidylate synthetase ThyA [Escherichia coli O26:H11 str. 11368] gi|257760636|dbj|BAI32133.1| thymidylate synthetase ThyA [Escherichia coli O103:H2 str. 12009] gi|257765862|dbj|BAI37357.1| thymidylate synthetase ThyA [Escherichia coli O111:H- str. 11128] gi|260448125|gb|ACX38547.1| Thymidylate synthase [Escherichia coli DH1] gi|281179852|dbj|BAI56182.1| thymidylate synthetase [Escherichia coli SE15] gi|284922763|emb|CBG35851.1| thymidylate synthase [Escherichia coli 042] gi|290764026|gb|ADD57987.1| Thymidylate synthase [Escherichia coli O55:H7 str. CB9615] gi|291322241|gb|EFE61670.1| thymidylate synthase [Escherichia coli B088] gi|291426322|gb|EFE99354.1| thymidylate synthase [Escherichia coli FVEC1412] gi|291432260|gb|EFF05242.1| thymidylate synthase [Escherichia coli B185] gi|291468943|gb|EFF11434.1| thymidylate synthase [Escherichia coli B354] gi|294493395|gb|ADE92151.1| thymidylate synthase [Escherichia coli IHE3034] gi|298277192|gb|EFI18708.1| thyA [Escherichia coli FVEC1302] gi|299879795|gb|EFI88006.1| thymidylate synthase [Escherichia coli MS 196-1] gi|300298822|gb|EFJ55207.1| thymidylate synthase [Escherichia coli MS 185-1] gi|300304692|gb|EFJ59212.1| thymidylate synthase [Escherichia coli MS 200-1] gi|300315168|gb|EFJ64952.1| thymidylate synthase [Escherichia coli MS 175-1] gi|300358170|gb|EFJ74040.1| thymidylate synthase [Escherichia coli MS 198-1] gi|300395007|gb|EFJ78545.1| thymidylate synthase [Escherichia coli MS 69-1] gi|300401546|gb|EFJ85084.1| thymidylate synthase [Escherichia coli MS 84-1] gi|300409228|gb|EFJ92766.1| thymidylate synthase [Escherichia coli MS 45-1] gi|300412642|gb|EFJ95952.1| thymidylate synthase [Escherichia coli MS 115-1] gi|300420498|gb|EFK03809.1| thymidylate synthase [Escherichia coli MS 182-1] gi|300450129|gb|EFK13749.1| thymidylate synthase [Escherichia coli MS 116-1] gi|300458573|gb|EFK22066.1| thymidylate synthase [Escherichia coli MS 21-1] gi|300526880|gb|EFK47949.1| thymidylate synthase [Escherichia coli MS 119-7] gi|300531683|gb|EFK52745.1| thymidylate synthase [Escherichia coli MS 107-1] gi|300841628|gb|EFK69388.1| thymidylate synthase [Escherichia coli MS 124-1] gi|300847121|gb|EFK74881.1| thymidylate synthase [Escherichia coli MS 78-1] gi|301076475|gb|EFK91281.1| thymidylate synthase [Escherichia coli MS 146-1] gi|305854307|gb|EFM54745.1| thymidylate synthase [Escherichia coli NC101] gi|306909458|gb|EFN39953.1| thymidylate synthase [Escherichia coli W] gi|307554821|gb|ADN47596.1| thymidylate synthetase [Escherichia coli ABU 83972] gi|307625581|gb|ADN69885.1| thymidylate synthase [Escherichia coli UM146] gi|308122282|gb|EFO59544.1| thymidylate synthase [Escherichia coli MS 145-7] gi|309703182|emb|CBJ02516.1| thymidylate synthase [Escherichia coli ETEC H10407] gi|312947378|gb|ADR28205.1| thymidylate synthase [Escherichia coli O83:H1 str. NRG 857C] gi|315062133|gb|ADT76460.1| thymidylate synthetase [Escherichia coli W] gi|315137431|dbj|BAJ44590.1| thymidylate synthase [Escherichia coli DH1] gi|315256688|gb|EFU36656.1| thymidylate synthase [Escherichia coli MS 85-1] gi|315289384|gb|EFU48779.1| thymidylate synthase [Escherichia coli MS 110-3] gi|315293800|gb|EFU53152.1| thymidylate synthase [Escherichia coli MS 153-1] gi|315295782|gb|EFU55099.1| thymidylate synthase [Escherichia coli MS 16-3] gi|315615214|gb|EFU95851.1| thymidylate synthase [Escherichia coli 3431] gi|320176416|gb|EFW51470.1| Thymidylate synthase [Shigella dysenteriae CDC 74-1112] gi|320182266|gb|EFW57169.1| Thymidylate synthase [Shigella boydii ATCC 9905] gi|320189156|gb|EFW63815.1| Thymidylate synthase [Escherichia coli O157:H7 str. EC1212] gi|320194962|gb|EFW69591.1| Thymidylate synthase [Escherichia coli WV_060327] gi|320202466|gb|EFW77036.1| Thymidylate synthase [Escherichia coli EC4100B] gi|320640475|gb|EFX10014.1| thymidylate synthase [Escherichia coli O157:H7 str. G5101] gi|320656517|gb|EFX24413.1| thymidylate synthase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662036|gb|EFX29437.1| thymidylate synthase [Escherichia coli O55:H7 str. USDA 5905] gi|320667111|gb|EFX34074.1| thymidylate synthase [Escherichia coli O157:H7 str. LSU-61] gi|323154804|gb|EFZ40998.1| thymidylate synthase [Escherichia coli EPECa14] gi|323160030|gb|EFZ45994.1| thymidylate synthase [Escherichia coli E128010] gi|323172870|gb|EFZ58501.1| thymidylate synthase [Escherichia coli LT-68] gi|323180264|gb|EFZ65816.1| thymidylate synthase [Escherichia coli 1180] gi|323183371|gb|EFZ68768.1| thymidylate synthase [Escherichia coli 1357] gi|323188757|gb|EFZ74042.1| thymidylate synthase [Escherichia coli RN587/1] gi|323377287|gb|ADX49555.1| thymidylate synthase [Escherichia coli KO11] gi|323935814|gb|EGB32117.1| thymidylate synthase [Escherichia coli E1520] gi|323957433|gb|EGB53155.1| thymidylate synthase [Escherichia coli H263] gi|323966808|gb|EGB62239.1| thymidylate synthase [Escherichia coli M863] gi|324005631|gb|EGB74850.1| thymidylate synthase [Escherichia coli MS 57-2] gi|324011659|gb|EGB80878.1| thymidylate synthase [Escherichia coli MS 60-1] gi|324016318|gb|EGB85537.1| thymidylate synthase [Escherichia coli MS 117-3] gi|324119867|gb|EGC13746.1| thymidylate synthase [Escherichia coli E1167] gi|326339105|gb|EGD62920.1| Thymidylate synthase [Escherichia coli O157:H7 str. 1044] gi|326343013|gb|EGD66781.1| Thymidylate synthase [Escherichia coli O157:H7 str. 1125] gi|327251574|gb|EGE63260.1| thymidylate synthase [Escherichia coli STEC_7v] gi|330908879|gb|EGH37393.1| thymidylate synthase [Escherichia coli AA86] gi|331036983|gb|EGI09207.1| thymidylate synthase [Escherichia coli H736] gi|331042334|gb|EGI14476.1| thymidylate synthase [Escherichia coli M605] gi|331053557|gb|EGI25586.1| thymidylate synthase [Escherichia coli TA206] gi|331058320|gb|EGI30301.1| thymidylate synthase [Escherichia coli TA143] gi|331063227|gb|EGI35140.1| thymidylate synthase [Escherichia coli TA271] gi|331068406|gb|EGI39801.1| thymidylate synthase [Escherichia coli TA280] gi|331073635|gb|EGI44956.1| thymidylate synthase [Escherichia coli H591] gi|331078085|gb|EGI49291.1| thymidylate synthase [Escherichia coli H299] gi|332088662|gb|EGI93775.1| thymidylate synthase [Shigella dysenteriae 155-74] gi|332344717|gb|AEE58051.1| thymidylate synthase ThyA [Escherichia coli UMNK88] gi|332999582|gb|EGK19167.1| thymidylate synthase [Shigella flexneri VA-6] Length = 264 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|283479574|emb|CAY75490.1| thymidylate synthetase [Erwinia pyrifoliae DSM 12163] Length = 279 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 16 MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 75 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+S +++ L+ Sbjct: 76 WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 135 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +++MAL PCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 136 SDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 195 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL R PR LP+++I L Sbjct: 196 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 255 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH AI A V++ Sbjct: 256 DYCFDDFEIEGYDPHPAIKAPVAI 279 >gi|226357353|ref|YP_002787093.1| thymidylate synthase [Deinococcus deserti VCD115] gi|259550769|sp|C1D070|TYSY_DEIDV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226319343|gb|ACO47339.1| putative thymidylate synthase [Deinococcus deserti VCD115] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV++ G+++ DRTG GT S FG+QMRFDL +GFPL+TTK+ H KS++HELL Sbjct: 1 MQQYLDFMRHVLEHGTEKTDRTGTGTLSVFGHQMRFDLQEGFPLVTTKRTHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G SNV+YL HGV+IWDEWAD DGELGP+YGVQWRSWP DG IDQI+ +V+ +R Sbjct: 61 WFLQGSSNVAYLREHGVTIWDEWADPDGELGPVYGVQWRSWPTPDGRHIDQIAQVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV I++MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RTPDSRRLIVSAWNVGEIEQMALPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEFI T GD HLY NH EQA QL+R PRTLP M +NP++ +L Sbjct: 181 YALLTLMVAQVTGLKPGEFIWTGGDCHLYTNHLEQARKQLTREPRTLPVMRLNPDVRELD 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDFTL Y+PH I A V+V Sbjct: 241 GFRFEDFTLEGYDPHPGIKAPVAV 264 >gi|150397222|ref|YP_001327689.1| thymidylate synthase [Sinorhizobium medicae WSM419] gi|166231736|sp|A6UB24|TYSY_SINMW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|150028737|gb|ABR60854.1| Thymidylate synthase [Sinorhizobium medicae WSM419] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 183/264 (69%), Positives = 223/264 (84%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HVI+ G+DR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL Sbjct: 1 MRQYLDLLEHVIETGTDRGDRTGTGTRSVFGYQMRFDLSQGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL HGV IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ L+ Sbjct: 61 WFLKGDTNIAYLKEHGVRIWDEWADENGDLGPVYGYQWRSWPTPDGGHIDQIATLVEGLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN AL+D MALPPCHCLFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 TNPNSRRHIVSAWNPALVDDMALPPCHCLFQFYVADGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NHFEQA LQL+R+P+ LP+M INP + DL Sbjct: 181 YALLTMMVAQVTGLEAGDFVHTLGDAHIYRNHFEQAQLQLTRTPKPLPRMEINPAVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFR+EDF L YE + I A V+V Sbjct: 241 SFRFEDFELTGYEADSHIKAPVAV 264 >gi|330831181|ref|YP_004394133.1| Thymidylate synthase [Aeromonas veronii B565] gi|328806317|gb|AEB51516.1| Thymidylate synthase [Aeromonas veronii B565] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL Sbjct: 1 MRAYLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG+VIDQI V ++ Sbjct: 61 WFLNGDTNTAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAADGSVIDQIQKAVDDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+F+ T GDVHLY+NH EQ LQLSR PR LP ++I + Sbjct: 181 YALLTHMMAQQCNLEVGDFVWTGGDVHLYSNHMEQTALQLSREPRPLPTLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+PH I A V++ Sbjct: 241 DYKFEDFEIEGYDPHPGIKAPVAI 264 >gi|323946537|gb|EGB42561.1| thymidylate synthase [Escherichia coli H120] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHALFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|82778203|ref|YP_404552.1| thymidylate synthase [Shigella dysenteriae Sd197] gi|309785137|ref|ZP_07679768.1| thymidylate synthase [Shigella dysenteriae 1617] gi|123728515|sp|Q32C94|TYSY_SHIDS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|81242351|gb|ABB63061.1| thymidylate synthetase [Shigella dysenteriae Sd197] gi|308926257|gb|EFP71733.1| thymidylate synthase [Shigella dysenteriae 1617] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGNTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|331654309|ref|ZP_08355309.1| thymidylate synthase [Escherichia coli M718] gi|331047691|gb|EGI19768.1| thymidylate synthase [Escherichia coli M718] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLRGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|325104763|ref|YP_004274417.1| thymidylate synthase [Pedobacter saltans DSM 12145] gi|324973611|gb|ADY52595.1| thymidylate synthase [Pedobacter saltans DSM 12145] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV+ G + DRTG GT S FGYQMRF+L +GFPLLTTKK+H KS++HEL+ Sbjct: 1 MKQYHDLMQHVLDNGVQKHDRTGTGTISVFGYQMRFNLEEGFPLLTTKKLHLKSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G LGP+YG QWRSWP DG IDQIS I+ ++ Sbjct: 61 WFLSGDTNIKYLKENGVRIWDEWADEEGNLGPVYGSQWRSWPTPDGRHIDQISQIISQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I+ MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVAEIENMALPPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+FIHTLGD HLYNNH EQA LQLSR R LP M INP + D+ Sbjct: 181 YALLTMMVAQVCDLKPGDFIHTLGDAHLYNNHLEQAKLQLSRDFRPLPTMRINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 GFKFEDFVLENYDPHPHIKGAVAV 264 >gi|113971196|ref|YP_734989.1| thymidylate synthase [Shewanella sp. MR-4] gi|114048434|ref|YP_738984.1| thymidylate synthase [Shewanella sp. MR-7] gi|122944477|sp|Q0HSH8|TYSY_SHESR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123029436|sp|Q0HG85|TYSY_SHESM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|113885880|gb|ABI39932.1| thymidylate synthase [Shewanella sp. MR-4] gi|113889876|gb|ABI43927.1| thymidylate synthase [Shewanella sp. MR-7] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL Sbjct: 1 MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + VSIWDEWAD++G+LGP+YG QWRSWP G+ IDQI+ ++ ++ Sbjct: 61 WFLKGDTNIAYLRDNKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQIAQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR PR LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPTMTILRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF L +Y+PH I A V+V Sbjct: 241 DYQFEDFELTNYDPHPHIKAPVAV 264 >gi|156932697|ref|YP_001436613.1| thymidylate synthase [Cronobacter sakazakii ATCC BAA-894] gi|166231698|sp|A7MR31|TYSY_ENTS8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|156530951|gb|ABU75777.1| hypothetical protein ESA_00482 [Cronobacter sakazakii ATCC BAA-894] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMNKVLHEGAQKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ L+ Sbjct: 61 WFLKGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRSWATPDGRHIDQLETVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEPGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|2258280|gb|AAC45469.1| thymidylate synthase [Neisseria gonorrhoeae] Length = 267 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 176/265 (66%), Positives = 213/265 (80%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GT S FGYQMRFDL KGFPLLTTKK+H +S++HELL Sbjct: 3 MKAYLDLMRHVLDNGTDKSDRTGTGTLSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62 Query: 61 WFLRGDSNVSYLHRHGVSIWD-EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 WFL+GD+N+ YL + VSIWD EWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 63 WFLKGDTNIKYLKDNNVSIWDDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G LSCQLYQRS D+FLG+PFNIA Sbjct: 123 KKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGNLSCQLYQRSADIFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL Sbjct: 183 SYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDL 242 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+PH I A VSV Sbjct: 243 FAFKFEDFELEGYDPHPHIKAVVSV 267 >gi|15616013|ref|NP_244318.1| thymidylate synthase [Bacillus halodurans C-125] gi|25091494|sp|Q9K7B5|TYSY_BACHD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|10176074|dbj|BAB07170.1| thymidylate synthase B [Bacillus halodurans C-125] Length = 264 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L RHV++ G++R DRTG GT S FGYQMRFDL +GFP++TTKK+H +S++HELL Sbjct: 1 MEQYLELCRHVLEHGTERSDRTGTGTISVFGYQMRFDLQEGFPVVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL +GV IW+EWAD++GELGP+YG QWRSW +G +DQIS +V++++ Sbjct: 61 WFLKGETNIAYLQENGVRIWNEWADENGELGPVYGKQWRSWEGANGKTVDQISQVVEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A I+ MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HQPDSRRLIVSAWNAAEIEDMALAPCHCLFQFYVQDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + GEF+HT GD H+Y NH EQ LQL+R PR LP+M +NP + L Sbjct: 181 YALLTKMIAQVCDLEEGEFVHTFGDAHIYLNHIEQVKLQLTREPRPLPEMRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L Y+PH I +VSV Sbjct: 241 DFTFDDFELVGYDPHPHIKGEVSV 264 >gi|148257348|ref|YP_001241933.1| thymidylate synthase [Bradyrhizobium sp. BTAi1] gi|166231692|sp|A5EPD3|TYSY_BRASB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|146409521|gb|ABQ38027.1| thymidylate synthase [Bradyrhizobium sp. BTAi1] Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL ++ G+++ DRTG GT S FG+QMRF+L GFPL+TTK++ K++VHELL Sbjct: 1 MHQYHDLLERILSDGAEKHDRTGTGTLSVFGHQMRFNLGAGFPLVTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI++++ ++ Sbjct: 61 WFLRGDTNIKYLHDHGVTIWDEWADANGDLGPVYGYQWRSWPTPDGGHIDQIANVIDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVVNGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+H+ GDVHLY+NH EQA LQL+R+PR+LP M +NP++ D+ Sbjct: 181 YALLTMMVAQVTGLKPGEFVHSFGDVHLYSNHVEQARLQLTRAPRSLPTMTLNPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF L Y+PH I A+V+V Sbjct: 241 AFRYEDFALAGYDPHPHIKAEVAV 264 >gi|117618975|ref|YP_855217.1| thymidylate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166231685|sp|A0KG32|TYSY_AERHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|117560382|gb|ABK37330.1| thymidylate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL Sbjct: 1 MRAYLDLMQKILDEGTVKSDRTGTGTISLFGHQMRFNLAEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG+VIDQI V ++ Sbjct: 61 WFLNGDTNTAYLKEHGVSIWDEWADENGDLGPVYGAQWRSWPAADGSVIDQIQKAVDDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+F+ T GDVHLY+NH EQ LQL+R PR LP ++I + Sbjct: 181 YALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLTREPRPLPTLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+PH I A V++ Sbjct: 241 DYKFEDFEIEGYDPHPGIKAPVAI 264 >gi|304392191|ref|ZP_07374133.1| thymidylate synthase [Ahrensia sp. R2A130] gi|303296420|gb|EFL90778.1| thymidylate synthase [Ahrensia sp. R2A130] Length = 272 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 175/264 (66%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G+DR DRTG GTRS FG+QMRFDL+ GFP++TTKK+H +S++ ELL Sbjct: 9 MRAYLDLLQHILDNGTDRGDRTGTGTRSVFGHQMRFDLADGFPMVTTKKLHLRSIIIELL 68 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G SN++YL + V IWDEWAD++GELGP+YGVQWRSWP DG+ IDQI+++++ ++ Sbjct: 69 WFLKGSSNIAYLQDNKVRIWDEWADENGELGPVYGVQWRSWPKSDGSTIDQIANVIEQIK 128 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR +VSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIAS Sbjct: 129 ANPNSRRLMVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSGDVFLGVPFNIAS 188 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD HLY NHF+QA QLSR PR LPQM I+P++ D+ Sbjct: 189 YALLTMMVAQVTGLKPGEFIHTLGDAHLYANHFDQAREQLSREPRALPQMKIDPSVDDIF 248 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YE F L Y+PH I AKV+V Sbjct: 249 GFEYEHFELTGYDPHPHIAAKVAV 272 >gi|71906233|ref|YP_283820.1| thymidylate synthase [Dechloromonas aromatica RCB] gi|123733364|sp|Q47II1|TYSY_DECAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|71845854|gb|AAZ45350.1| thymidylate synthase [Dechloromonas aromatica RCB] Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV+ G+D+ DRTG GTRS FG+QMRFDLS+GFP++TTKK+H KS++HELL Sbjct: 1 MQPYLDLMRHVLDNGNDKSDRTGTGTRSVFGWQMRFDLSQGFPVMTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL +GV IWDEWAD++G+LGP+YG QWR W DG VIDQI+ +V SL+ Sbjct: 61 WFIQGDTNIKYLQENGVKIWDEWADENGDLGPVYGKQWRRWETPDGRVIDQITQLVNSLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN +D MALPPCHCLFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNPGDVDNMALPPCHCLFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+L TMMLA V G+Q GEF+HT GD HLY+NHFEQA LQLSR R LP M INP + DL Sbjct: 181 YALFTMMLAQVCGYQPGEFVHTFGDAHLYSNHFEQAKLQLSRDTRPLPTMWINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L Y+PH I A V+V Sbjct: 241 AFRFEDFRLEGYDPHPHIPAPVAV 264 >gi|333000932|gb|EGK20502.1| thymidylate synthase [Shigella flexneri K-272] gi|333015566|gb|EGK34905.1| thymidylate synthase [Shigella flexneri K-227] Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YTLLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|194439864|ref|ZP_03071928.1| thymidylate synthase [Escherichia coli 101-1] gi|253772319|ref|YP_003035150.1| thymidylate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162755|ref|YP_003045863.1| thymidylate synthase [Escherichia coli B str. REL606] gi|297518254|ref|ZP_06936640.1| thymidylate synthase [Escherichia coli OP50] gi|300931292|ref|ZP_07146631.1| thymidylate synthase [Escherichia coli MS 187-1] gi|194421201|gb|EDX37224.1| thymidylate synthase [Escherichia coli 101-1] gi|242378375|emb|CAQ33153.1| thymidylate synthase [Escherichia coli BL21(DE3)] gi|253323363|gb|ACT27965.1| thymidylate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974656|gb|ACT40327.1| thymidylate synthase [Escherichia coli B str. REL606] gi|253978821|gb|ACT44491.1| thymidylate synthase [Escherichia coli BL21(DE3)] gi|300460876|gb|EFK24369.1| thymidylate synthase [Escherichia coli MS 187-1] gi|323960730|gb|EGB56353.1| thymidylate synthase [Escherichia coli H489] gi|323971644|gb|EGB66874.1| thymidylate synthase [Escherichia coli TA007] Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+PH I A V++ Sbjct: 241 DYSFEDFEIEGYDPHPGIKAPVAI 264 >gi|157162279|ref|YP_001459597.1| thymidylate synthase [Escherichia coli HS] gi|170018930|ref|YP_001723884.1| thymidylate synthase [Escherichia coli ATCC 8739] gi|256019377|ref|ZP_05433242.1| thymidylate synthase [Shigella sp. D9] gi|312972955|ref|ZP_07787128.1| thymidylate synthase [Escherichia coli 1827-70] gi|332280497|ref|ZP_08392910.1| thymidylate synthase [Shigella sp. D9] gi|166991229|sp|A8A3W0|TYSY_ECOHS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036933|sp|B1IU17|TYSY_ECOLC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157067959|gb|ABV07214.1| thymidylate synthase [Escherichia coli HS] gi|169753858|gb|ACA76557.1| Thymidylate synthase [Escherichia coli ATCC 8739] gi|310332897|gb|EFQ00111.1| thymidylate synthase [Escherichia coli 1827-70] gi|332102849|gb|EGJ06195.1| thymidylate synthase [Shigella sp. D9] Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGNTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|230780|pdb|2TSC|A Chain A, Structure, Multiple Site Binding, And Segmental Accomodation In Thymidylate Synthase On Binding DUMP AND An Anti-Folate gi|230781|pdb|2TSC|B Chain B, Structure, Multiple Site Binding, And Segmental Accomodation In Thymidylate Synthase On Binding DUMP AND An Anti-Folate Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRAPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|85714701|ref|ZP_01045688.1| thymidylate synthase [Nitrobacter sp. Nb-311A] gi|85698586|gb|EAQ36456.1| thymidylate synthase [Nitrobacter sp. Nb-311A] Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+QY DLL +++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+ +S+VHELL Sbjct: 1 MNQYHDLLERILREGAEKHDRTGTGTLSVFGHQMRFDLASGFPMLTTKKLPLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ +R Sbjct: 61 WFLRGETNIKYLKDNGVSIWDEWADENGDLGPVYGSQWRSWPAPDGGSIDQIANVIDMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +DKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G G+F+H+LGD HLY+NH EQA LQLSR R LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLSPGDFVHSLGDAHLYSNHLEQARLQLSRPARPLPTMTINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F Y DF L +Y+PH I A+V+V Sbjct: 241 AFCYGDFKLENYDPHPHIKAEVAV 264 >gi|270264851|ref|ZP_06193115.1| thymidylate synthetase [Serratia odorifera 4Rx13] gi|270041149|gb|EFA14249.1| thymidylate synthetase [Serratia odorifera 4Rx13] Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMNKVLAEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL + VSIWDEWAD+ G+LGP+YG QWR+W DG IDQ+S++++ L+ Sbjct: 61 WFLNGDTNVAYLRENNVSIWDEWADEHGDLGPVYGKQWRAWGAADGRQIDQLSNVLKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTRLQLTREPRALPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|146342419|ref|YP_001207467.1| thymidylate synthase [Bradyrhizobium sp. ORS278] gi|166231693|sp|A4YZC4|TYSY_BRASO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|146195225|emb|CAL79250.1| Thymidylate synthase (TS) (TSase) [Bradyrhizobium sp. ORS278] Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 216/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL ++ G+ + DRTG GT S FG+QMRF+L+ GFP++TTK++ K++VHELL Sbjct: 1 MHQYHDLLERILSDGAQKHDRTGTGTLSVFGHQMRFNLAAGFPMVTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQIS++V +R Sbjct: 61 WFLKGDTNIKYLHDHGVTIWDEWADANGDLGPVYGYQWRSWPTSDGGQIDQISNVVDMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+H+ GDVHLY+NH EQA LQLSR+PR LP M +NP++ D+ Sbjct: 181 YALLTMMVAQVTGLKLGEFVHSFGDVHLYSNHIEQARLQLSRTPRPLPTMTLNPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF L Y+PH I A+V+V Sbjct: 241 AFRYEDFALAGYDPHPHIKAEVAV 264 >gi|882719|gb|AAB40474.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655] Length = 264 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVXDGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|300718158|ref|YP_003742961.1| Thymidylate synthase [Erwinia billingiae Eb661] gi|299063994|emb|CAX61114.1| Thymidylate synthase [Erwinia billingiae Eb661] Length = 264 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S+VHELL Sbjct: 1 MKQYLDLMRKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + V+IWDEWAD++G+LGP+YG QWRSW DG IDQ+++++Q L+ Sbjct: 61 WFLNGDTNTAYLQENKVTIWDEWADENGDLGPVYGKQWRSWGAADGREIDQLTNVLQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQTHLQLTREPRPLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPPIKAPVAI 264 >gi|329119726|ref|ZP_08248406.1| thymidylate synthase [Neisseria bacilliformis ATCC BAA-1200] gi|327464175|gb|EGF10480.1| thymidylate synthase [Neisseria bacilliformis ATCC BAA-1200] Length = 264 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 179/264 (67%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V+ G+D+ DRTG GTRS FG+QMRFDL GFPLLTTKK+H +S++HELL Sbjct: 1 MRQYLDLMRRVLDSGTDKSDRTGTGTRSVFGHQMRFDLQDGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YLH + VSIWDEWAD++GELGP+YG QWRSWP DG IDQI++++ ++ Sbjct: 61 WFLRGDTNIRYLHENQVSIWDEWADENGELGPVYGYQWRSWPAPDGRHIDQIANVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ANPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM A V G Q GEF+HTLGD HLY NHFEQA LQL+R PRTLP+M +NP + D+ Sbjct: 181 YALLTMMAAQVCGLQAGEFVHTLGDAHLYRNHFEQAKLQLTREPRTLPKMTLNPAVRDIS 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++DFTL Y+PH I A V+V Sbjct: 241 AFTFDDFTLTGYDPHPHIKAAVAV 264 >gi|192292373|ref|YP_001992978.1| thymidylate synthase [Rhodopseudomonas palustris TIE-1] gi|192286122|gb|ACF02503.1| Thymidylate synthase [Rhodopseudomonas palustris TIE-1] Length = 264 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 172/264 (65%), Positives = 216/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL ++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTK++ K++VHELL Sbjct: 1 MIQYQDLLERILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGGSIDQIANVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLMVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEF+HTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ Sbjct: 181 YALLTLMVAQVTGLKPGEFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTINPAVNDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDFTL Y+PH I A+V+V Sbjct: 241 GFRYEDFTLTGYDPHPHIKAEVAV 264 >gi|218128749|ref|ZP_03457553.1| hypothetical protein BACEGG_00321 [Bacteroides eggerthii DSM 20697] gi|217988977|gb|EEC55293.1| hypothetical protein BACEGG_00321 [Bacteroides eggerthii DSM 20697] Length = 264 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS +++++ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH Q LQLSR P+ LPQM INP++ ++ Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLAQVKLQLSREPKALPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I KV+V Sbjct: 241 DFKFEDFELINYDPHPHIAGKVAV 264 >gi|194290285|ref|YP_002006192.1| thymidylate synthase [Cupriavidus taiwanensis LMG 19424] gi|193224120|emb|CAQ70129.1| thymidylate synthetase [Cupriavidus taiwanensis LMG 19424] Length = 283 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL +GFP++TTKK+H KS+++ELL Sbjct: 20 MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLREGFPVVTTKKLHLKSIIYELL 79 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L HGV+IWDEWAD+ GELGP+YG QWRSWP DG IDQI+ +V +R Sbjct: 80 WFLQGSTNVRWLQEHGVTIWDEWADEHGELGPVYGSQWRSWPAPDGRHIDQITELVAQIR 139 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWNVA I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 140 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 199 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + G+FI T GD HLYNNHFEQ QL+R P LPQ+ I + Sbjct: 200 YALLTHMMAQQTGLEVGDFIWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRRPDSIF 259 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF L Y+ H AI A V+V Sbjct: 260 DYRYEDFELAGYQSHPAIKAPVAV 283 >gi|239832277|ref|ZP_04680606.1| thymidylate synthase [Ochrobactrum intermedium LMG 3301] gi|239824544|gb|EEQ96112.1| thymidylate synthase [Ochrobactrum intermedium LMG 3301] Length = 307 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 174/264 (65%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRF+L +GFP+LTTKK+H +S++HELL Sbjct: 44 MRTYLDLLQHVLDNGVDRGDRTGTGTRSVFGYQMRFNLEEGFPVLTTKKLHLRSIIHELL 103 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 104 WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 163 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 164 GNPNSRRLIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 223 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HTLGD H+Y NHF+QA QL+R+P+ LPQM INP++ DL Sbjct: 224 YALLTMMIAQVTGLKPGEFVHTLGDAHIYANHFDQAREQLARTPKKLPQMWINPDVKDLF 283 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 284 AFRFEDFRLEGYEADPTIKAPIAV 307 >gi|255691312|ref|ZP_05414987.1| thymidylate synthase [Bacteroides finegoldii DSM 17565] gi|260622954|gb|EEX45825.1| thymidylate synthase [Bacteroides finegoldii DSM 17565] Length = 264 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 165/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLEDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD +G+LG IYG QWRSWPDY+G IDQIS V++++ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISETVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ LQL+R PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLTREPRPLPQMNINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264 >gi|218550075|ref|YP_002383866.1| thymidylate synthase [Escherichia fergusonii ATCC 35469] gi|226713170|sp|B7LNI2|TYSY_ESCF3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|218357616|emb|CAQ90255.1| thymidylate synthetase [Escherichia fergusonii ATCC 35469] gi|324114883|gb|EGC08849.1| thymidylate synthase [Escherichia fergusonii B253] gi|325498403|gb|EGC96262.1| thymidylate synthase [Escherichia fergusonii ECD227] Length = 264 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR+LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRSLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|317475464|ref|ZP_07934728.1| thymidylate synthase [Bacteroides eggerthii 1_2_48FAA] gi|316908492|gb|EFV30182.1| thymidylate synthase [Bacteroides eggerthii 1_2_48FAA] Length = 264 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS +++++ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQLSR P+ LPQM INP++ ++ Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPKALPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I KV+V Sbjct: 241 DFKFEDFELINYDPHPHIAGKVAV 264 >gi|329957787|ref|ZP_08298262.1| thymidylate synthase [Bacteroides clarus YIT 12056] gi|328522664|gb|EGF49773.1| thymidylate synthase [Bacteroides clarus YIT 12056] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQLSR PRTLPQM INP++ + Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPRTLPQMRINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YEDF L +Y+PH I KV+V Sbjct: 241 DFTYEDFELVNYDPHPHIAGKVAV 264 >gi|209761048|gb|ACI78836.1| thymidylate synthetase [Escherichia coli] gi|320645721|gb|EFX14706.1| thymidylate synthase [Escherichia coli O157:H- str. 493-89] gi|320651021|gb|EFX19461.1| thymidylate synthase [Escherichia coli O157:H- str. H 2687] gi|332087353|gb|EGI92481.1| thymidylate synthase [Shigella boydii 5216-82] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWIGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|313206101|ref|YP_004045278.1| thymidylate synthase [Riemerella anatipestifer DSM 15868] gi|312445417|gb|ADQ81772.1| thymidylate synthase [Riemerella anatipestifer DSM 15868] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 172/264 (65%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL Sbjct: 1 MQNYLDLLQHILDHGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ +GVSIWDEWAD +G LGP+YG QWRSW +G VIDQIS ++ ++ Sbjct: 61 WFLKGDTNIKYLNDNGVSIWDEWADDNGNLGPVYGAQWRSWKGANGKVIDQISEVIHQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A I MAL PCH LFQFYV +G+LS QLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNAAEIPNMALAPCHALFQFYVADGRLSLQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q GE+IH+ GDVH+YNNHFEQ QLSR PR LP M +NP++ DL Sbjct: 181 YALLTMMVAQVCGLQVGEYIHSFGDVHIYNNHFEQVQKQLSREPRPLPTMKLNPSVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +Y PH+ I A V+V Sbjct: 241 DFKFEDFTLENYHPHSGIKAPVAV 264 >gi|283835406|ref|ZP_06355147.1| thymidylate synthase [Citrobacter youngae ATCC 29220] gi|291068577|gb|EFE06686.1| thymidylate synthase [Citrobacter youngae ATCC 29220] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH +Q LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|295097375|emb|CBK86465.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|157148372|ref|YP_001455691.1| thymidylate synthase [Citrobacter koseri ATCC BAA-895] gi|166231695|sp|A8AP42|TYSY_CITK8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157085577|gb|ABV15255.1| hypothetical protein CKO_04194 [Citrobacter koseri ATCC BAA-895] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLREGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + V+IWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVTIWDEWADENGNLGPVYGKQWRAWPAPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|302346549|ref|YP_003814847.1| thymidylate synthase [Prevotella melaninogenica ATCC 25845] gi|302150410|gb|ADK96671.1| thymidylate synthase [Prevotella melaninogenica ATCC 25845] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL ++ G+ + DRTG GT S FG+QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLNLLNRILTEGTQKGDRTGTGTLSIFGHQMRFDLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL HGV IW+EWAD++GELGP+YG QWRSWPDY G IDQI ++V+ ++ Sbjct: 61 WFLRGDTNVRYLQEHGVRIWNEWADENGELGPVYGHQWRSWPDYKGGTIDQIKNVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A ++ MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPNSRRMLVTAWNPAEVEDMALPPCHCLFQFYVADGRLSLQLYQRSADSFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLLQMIAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+P I V+V Sbjct: 241 DFKYEDFELIGYDPLPHIPGVVAV 264 >gi|319651224|ref|ZP_08005354.1| thymidylate synthase [Bacillus sp. 2_A_57_CT2] gi|317397004|gb|EFV77712.1| thymidylate synthase [Bacillus sp. 2_A_57_CT2] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL +HV++ G+ + DRTG GT STFGYQMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLCKHVLENGTKKEDRTGTGTISTFGYQMRFNLQEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW+EWAD++G LGP+YG QWRSW DGN +DQISS++ ++ Sbjct: 61 WFLNGDTNVKYLQENGVRIWNEWADEEGNLGPVYGHQWRSWTGADGNTVDQISSLIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN I+KMALPPCHC+FQFY +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVNAWNAGEIEKMALPPCHCMFQFYAADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEF+HT GDVH+Y NH +Q +LQLSR PR LP+MIINP++ D+ Sbjct: 181 YALLTMMVAQVCDLEPGEFVHTFGDVHIYQNHIDQVNLQLSRDPRPLPKMIINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+++DF L Y PH I VSV Sbjct: 241 SFKFDDFQLEDYNPHPHIKGVVSV 264 >gi|92114690|ref|YP_574618.1| thymidylate synthase [Chromohalobacter salexigens DSM 3043] gi|123387366|sp|Q1QUD9|TYSY_CHRSD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91797780|gb|ABE59919.1| thymidylate synthase [Chromohalobacter salexigens DSM 3043] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV++ G ++ DRTG GT S FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MQPYLDLMRHVLENGVEKSDRTGTGTLSVFGHQMRFDLAAGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL + V IWDEWAD++G+LGP+YG QWRSWP DG +DQI+++V+ ++ Sbjct: 61 WFLRGDTNIAYLKENRVRIWDEWADENGDLGPVYGYQWRSWPRPDGGHVDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A GEF+HTLGD HLY NH EQA LQLSR PR LP++++NP + D+ Sbjct: 181 YALLTHMVAQACDLAPGEFVHTLGDAHLYLNHLEQARLQLSREPRALPRLVLNPRVKDVF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++D + Y+PH I A+V+V Sbjct: 241 AFTFDDIAIEDYDPHPHIKAEVAV 264 >gi|82545129|ref|YP_409076.1| thymidylate synthase [Shigella boydii Sb227] gi|123741947|sp|Q31XG0|TYSY_SHIBS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|81246540|gb|ABB67248.1| thymidylate synthetase [Shigella boydii Sb227] gi|320185586|gb|EFW60351.1| Thymidylate synthase [Shigella flexneri CDC 796-83] gi|332091971|gb|EGI97049.1| thymidylate synthase [Shigella boydii 3594-74] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y PH I A V++ Sbjct: 241 DYRFEDFEIEGYAPHPGIKAPVAI 264 >gi|119774004|ref|YP_926744.1| thymidylate synthase [Shewanella amazonensis SB2B] gi|166231729|sp|A1S3W8|TYSY_SHEAM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119766504|gb|ABL99074.1| thymidylate synthase [Shewanella amazonensis SB2B] Length = 264 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 165/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G+D+ DRTG GTRS FGYQMRFDL++GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKHILDKGTDKSDRTGTGTRSVFGYQMRFDLNEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV YLH + VSIWDEWAD+ G LGP+YG QWRSWP DG IDQIS +++ ++ Sbjct: 61 WFLKGETNVDYLHENKVSIWDEWADEKGNLGPVYGAQWRSWPTPDGRHIDQISQVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 ATPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR PR LP M I + + Sbjct: 181 YALLTMMVAQQCNLGLGDFVWTGGDTHLYSNHMEQTQLQLSREPRPLPTMKILRHPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF L Y+PH I A V++ Sbjct: 241 DYRFEDFELSGYDPHPHIKAPVAI 264 >gi|154247442|ref|YP_001418400.1| thymidylate synthase [Xanthobacter autotrophicus Py2] gi|154161527|gb|ABS68743.1| Thymidylate synthase [Xanthobacter autotrophicus Py2] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLLR ++ G + DRTG GT S FG+QMRFDL +GFPL+TTKK+H KS+VHELL Sbjct: 1 MHQYHDLLRRILNEGVRKDDRTGTGTLSVFGHQMRFDLGEGFPLVTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GVSIWDEWAD+ G+LGP+YG QWRSWP +G VIDQI+ +V +R Sbjct: 61 WFLAGDTNVRYLKDNGVSIWDEWADEKGDLGPVYGHQWRSWPTPEGGVIDQIAQVVSDIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A + KMALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPADVSKMALPPCHCLFQFYVLEGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G G+F+HTLGD HLY NH EQA QL R+PR LP++ +NP + DL Sbjct: 181 YALLTHMVAQVTGLGVGDFVHTLGDAHLYVNHLEQARAQLERTPRALPRLALNPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYED + Y+PH AI A V+V Sbjct: 241 AFRYEDVEIVGYDPHPAIKAPVAV 264 >gi|260911785|ref|ZP_05918357.1| thymidylate synthase [Prevotella sp. oral taxon 472 str. F0295] gi|260634111|gb|EEX52229.1| thymidylate synthase [Prevotella sp. oral taxon 472 str. F0295] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ ++ G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYLDLLQRIVNEGTRKEDRTGTGTLSVFGHQMRFNLQEGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSWP+Y+G IDQI SI+ +L+ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYNGGHIDQIQSIINALK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+MALPPCHCLFQFYV GKLS QLYQRS D FLG+PFNIAS Sbjct: 121 TNPDSRRMIVSAWNVAEVDQMALPPCHCLFQFYVAKGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q G+FIHT GD HLY NH EQA QL R+PR LP+M+INPN+ + Sbjct: 181 YALLTMMMAQVCGLQPGDFIHTTGDTHLYLNHLEQAKEQLKRTPRALPKMVINPNVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+Y++FTL Y+P I A+VSV Sbjct: 241 DFKYDNFTLEGYDPLPHIKAEVSV 264 >gi|255011158|ref|ZP_05283284.1| thymidylate synthase [Bacteroides fragilis 3_1_12] gi|313148970|ref|ZP_07811163.1| thymidylate synthase [Bacteroides fragilis 3_1_12] gi|313137737|gb|EFR55097.1| thymidylate synthase [Bacteroides fragilis 3_1_12] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRFDL +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLAEGTEKGDRTGTGTISVFGHQMRFDLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD+ G+LG IYG QWRSWP+YDG IDQIS V +++ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADEKGDLGHIYGYQWRSWPNYDGGFIDQISEAVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHTLGD H+Y NH EQ LQLSR PRTLPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGEFIHTLGDAHIYLNHLEQVKLQLSREPRTLPQMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L +Y+PH I KV+V Sbjct: 241 DFRFEDFELVNYDPHPHIAGKVAV 264 >gi|260599168|ref|YP_003211739.1| thymidylate synthase [Cronobacter turicensis z3032] gi|260218345|emb|CBA33364.1| Thymidylate synthase [Cronobacter turicensis z3032] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 157/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMNKVLHEGAQKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ L+ Sbjct: 61 WFLKGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRSWTAPDGRHIDQLETVINQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL+R PR LP++II L Sbjct: 181 YALLVHMMAQQCDLEPGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|161761105|pdb|2VET|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q Complexed With Dump gi|163931137|pdb|3B5B|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q gi|163931138|pdb|3B5B|B Chain B, Crystal Structure Of The Thymidylate Synthase K48q Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TT++ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTQRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|311278228|ref|YP_003940459.1| thymidylate synthase [Enterobacter cloacae SCF1] gi|308747423|gb|ADO47175.1| thymidylate synthase [Enterobacter cloacae SCF1] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGAQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + V+IWDEWAD+ G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLKGDTNVAYLHENNVTIWDEWADEQGNLGPVYGKQWRAWPTPDGRHIDQITTVINQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCSLEVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|118590864|ref|ZP_01548264.1| thymidylate synthase [Stappia aggregata IAM 12614] gi|118436386|gb|EAV43027.1| thymidylate synthase [Stappia aggregata IAM 12614] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G DR DRTG GTRS FG+QMRFDLS+GFP TTKK+H KS++HELL Sbjct: 1 MQQYLDLLSKILDEGVDRGDRTGTGTRSIFGHQMRFDLSQGFPCTTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWD+WAD++G+LGP+YG QWRSWP DG IDQI+++++ +R Sbjct: 61 WFLAGDTNIRYLKENGVKIWDDWADENGDLGPVYGYQWRSWPAPDGRSIDQIANLLKMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPESRRLIVSAWNPALVDEMALPPCHSLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HT GD HLY NHF+QA QL+RSPR LP+M INP + DL Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTFGDAHLYANHFDQAREQLTRSPRPLPEMKINPEVTDLS 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y+P I A ++V Sbjct: 241 AFKFEDFELTGYDPLPHIAAPIAV 264 >gi|288927630|ref|ZP_06421477.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108] gi|288330464|gb|EFC69048.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 174/264 (65%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ ++ G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYLDLLQRIVNEGTRKEDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSWP+Y+G +DQI IV +L+ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYNGGHVDQIQDIVNALK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+MALPPCHCLFQFYV NGKLS QLYQRS D FLG+PFNIAS Sbjct: 121 NNPDSRRMIVSAWNVAEVDQMALPPCHCLFQFYVANGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHT GD HLY NH EQA QL R+PRTLP+M+INPN+ + Sbjct: 181 YALLTMMMAQVSGLKPGDFIHTTGDTHLYLNHLEQAKEQLKRTPRTLPRMVINPNVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+Y+DFTL Y+P I A+VSV Sbjct: 241 DFKYDDFTLEGYDPLPHIKAEVSV 264 >gi|150010315|ref|YP_001305058.1| thymidylate synthase [Parabacteroides distasonis ATCC 8503] gi|256839166|ref|ZP_05544676.1| thymidylate synthase [Parabacteroides sp. D13] gi|262382399|ref|ZP_06075536.1| thymidylate synthase [Bacteroides sp. 2_1_33B] gi|298374712|ref|ZP_06984670.1| thymidylate synthase [Bacteroides sp. 3_1_19] gi|301308397|ref|ZP_07214351.1| thymidylate synthase [Bacteroides sp. 20_3] gi|166231722|sp|A6LIC2|TYSY_PARD8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|149938739|gb|ABR45436.1| thymidylate synthase [Parabacteroides distasonis ATCC 8503] gi|256740085|gb|EEU53409.1| thymidylate synthase [Parabacteroides sp. D13] gi|262295277|gb|EEY83208.1| thymidylate synthase [Bacteroides sp. 2_1_33B] gi|298269080|gb|EFI10735.1| thymidylate synthase [Bacteroides sp. 3_1_19] gi|300833867|gb|EFK64483.1| thymidylate synthase [Bacteroides sp. 20_3] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLELLNRVLTEGVRKEDRTGTGTISVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL HGV IW+EWAD DG LG IYG QWRSWPDY G IDQI+ V++++ Sbjct: 61 WFLNGDTNVKYLQDHGVRIWNEWADADGSLGHIYGYQWRSWPDYKGGSIDQITEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G + G+F+HTLGD H+Y+NH EQ LQL+R PR LP+M INP++ + Sbjct: 181 YALLLQMMAQATGLKAGDFVHTLGDAHIYSNHLEQVKLQLTREPRALPRMEINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y+PH I +V+V Sbjct: 241 DFKFEDFNLTGYDPHPHIKGEVAV 264 >gi|157372056|ref|YP_001480045.1| thymidylate synthase [Serratia proteamaculans 568] gi|166991231|sp|A8GIH7|TYSY_SERP5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157323820|gb|ABV42917.1| Thymidylate synthase [Serratia proteamaculans 568] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMNKVLAEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL + VSIWDEWAD++G LGP+YG QWR+W DG IDQ+++++ L+ Sbjct: 61 WFLNGDTNVAYLKENKVSIWDEWADENGNLGPVYGKQWRAWGTADGRQIDQLTTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTQLQLTREPRALPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|74318058|ref|YP_315798.1| thymidylate synthase [Thiobacillus denitrificans ATCC 25259] gi|123759029|sp|Q3SH96|TYSY_THIDA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|74057553|gb|AAZ97993.1| thymidylate synthase [Thiobacillus denitrificans ATCC 25259] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV++ G+ + DRTG GT S FG+Q R+DL+ GFPL+TTKK H +S+VHELL Sbjct: 1 MKPYLDLMRHVLEHGTRKDDRTGTGTLSVFGWQTRYDLAAGFPLVTTKKCHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG VIDQI+ V++LR Sbjct: 61 WFLQGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRSWPKADGGVIDQIAEAVKTLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+MAL PCH FQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRIIVSAWNVADLDRMALAPCHAFFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+HTLGD HLY NH EQA QLSR PR LP M +NP++ D+ Sbjct: 181 YALLTLMMAQVTGLKPGDFVHTLGDAHLYVNHLEQAREQLSREPRPLPTMTLNPDVTDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDFTL Y+PH AI A V+V Sbjct: 241 GFRFEDFTLGGYDPHPAIKAPVAV 264 >gi|311030413|ref|ZP_07708503.1| thymidylate synthase [Bacillus sp. m3-13] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL +H++ G+++ DRTG GT STFGYQMRFDL +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLCKHILHNGTEKEDRTGTGTISTFGYQMRFDLQEGFPLVTTKKLHVKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IW+EWAD++G+LGP+YG QWRSWP DG IDQI+ +++ ++ Sbjct: 61 WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGYQWRSWPTPDGESIDQIAKLIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D MALPPCH +FQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPDSRRLIVSAWNVANVDSMALPPCHTMFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEFIHTLGD H+Y+NH EQ +LQL R P+ LP+M +N + + Sbjct: 181 YALLTMMVAQVCELEPGEFIHTLGDAHIYSNHIEQVNLQLGREPKKLPKMKLNKEVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDFTL Y+ H I VSV Sbjct: 241 DFKYEDFTLVDYDAHPHIKGVVSV 264 >gi|24022343|gb|AAN41256.1| mutant thymidilate synthetase [Escherichia coli] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFP +TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPQVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|260591057|ref|ZP_05856515.1| thymidylate synthase [Prevotella veroralis F0319] gi|260536922|gb|EEX19539.1| thymidylate synthase [Prevotella veroralis F0319] Length = 264 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G + DRTG GT S FG QMRF+L GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLDLLSRILNEGVHKGDRTGTGTLSVFGNQMRFNLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL HGV IW+EWAD+ G+LGP+YG QWRSWPDY G IDQI++++ ++ Sbjct: 61 WFLRGDTNIHYLQEHGVRIWNEWADEHGDLGPVYGHQWRSWPDYKGGTIDQITNVLDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPNSRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY+NH EQA LQL+R+PR LP+M INP++ DL Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYSNHLEQAKLQLTRTPRPLPKMKINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+YEDF L Y P+ I A+V+V Sbjct: 241 AFKYEDFELVDYNPYPHISAEVAV 264 >gi|315022907|gb|EFT35930.1| Thymidylate synthase [Riemerella anatipestifer RA-YM] gi|325336455|gb|ADZ12729.1| Thymidylate synthase [Riemerella anatipestifer RA-GD] Length = 264 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 172/264 (65%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL Sbjct: 1 MQNYLDLLQHILDHGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ +GVSIWDEWAD +G LGP+YG QWRSW +G VIDQIS ++ ++ Sbjct: 61 WFLKGDTNIKYLNDNGVSIWDEWADDNGNLGPVYGAQWRSWKGANGKVIDQISEVIHQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A I MAL PCH LFQFYV +G+LS QLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNAAEIPNMALAPCHALFQFYVADGRLSLQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q GE+IH+ GDVH+YNNHFEQ QLSR PR LP M +NP++ DL Sbjct: 181 YTLLTMMVAQVCGLQVGEYIHSFGDVHIYNNHFEQVQKQLSREPRPLPTMKLNPSVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +Y PH+ I A V+V Sbjct: 241 DFKFEDFTLENYHPHSGIKAPVAV 264 >gi|308187979|ref|YP_003932110.1| thymidylate synthetase [Pantoea vagans C9-1] gi|308058489|gb|ADO10661.1| thymidylate synthetase [Pantoea vagans C9-1] Length = 264 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMQHVLHEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSW G IDQ+S +++ L+ Sbjct: 61 WFLKGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRSWGTASGQEIDQLSQVMEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV + +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RDPDSRRIIVSAWNVGELSEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQA LQL+R PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH AI A V++ Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAI 264 >gi|327402847|ref|YP_004343685.1| thymidylate synthase [Fluviicola taffensis DSM 16823] gi|327318355|gb|AEA42847.1| thymidylate synthase [Fluviicola taffensis DSM 16823] Length = 264 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+H++ G+ + DRTG GT STFGYQMR++L +GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYHDLLQHILDKGTFKGDRTGTGTLSTFGYQMRYNLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQIS+++ ++ Sbjct: 61 WFLQGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPTPDGGSIDQISNLIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNVA +D MALPPCH +FQFYV +GKLSCQLYQRS D FLG+PFNIAS Sbjct: 121 KNPNSRRLIVNAWNVAYVDNMALPPCHTMFQFYVADGKLSCQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEFIHTLGD HLY+NH +QA LQL R R LP M INP + D+ Sbjct: 181 YALLTMMIAQVCDLKPGEFIHTLGDAHLYSNHLDQAKLQLERDFRPLPTMKINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y+PH I A ++V Sbjct: 241 GFKYEDFELLNYDPHPTIKAPIAV 264 >gi|255535905|ref|YP_003096276.1| Thymidylate synthase [Flavobacteriaceae bacterium 3519-10] gi|255342101|gb|ACU08214.1| Thymidylate synthase [Flavobacteriaceae bacterium 3519-10] Length = 302 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+++I G+++ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL Sbjct: 39 MQNYLDLLQNIIDNGTNKTDRTGTGTRSIFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 98 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIW+EWAD++G+LGP+YGVQWRSW DG V+DQIS ++ ++ Sbjct: 99 WFLKGDTNIKYLADNGVSIWNEWADENGDLGPVYGVQWRSWNGADGKVVDQISDVIDQIK 158 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV+ I MAL PCH LFQFYV +GKLS QLYQRS DVFLG+PFNIAS Sbjct: 159 KNPDSRRLIVSAWNVSEIPNMALAPCHALFQFYVADGKLSLQLYQRSADVFLGVPFNIAS 218 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V + G+++HT GDVH+YNNHFEQ + QLSR+P+ LP M +NP I D+ Sbjct: 219 YALLLMMVAQVCELEVGDYVHTFGDVHIYNNHFEQVNKQLSRTPKPLPVMKLNPEIKDIF 278 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF +EDFTL +Y+P+ I A V+V Sbjct: 279 SFNFEDFTLENYDPYPGIKAPVAV 302 >gi|329961539|ref|ZP_08299620.1| thymidylate synthase [Bacteroides fluxus YIT 12057] gi|328531751|gb|EGF58580.1| thymidylate synthase [Bacteroides fluxus YIT 12057] Length = 264 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 165/264 (62%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNMEEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLKGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NGKLS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ LQL+R PR LPQM INP++ D+ Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLTREPRALPQMQINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y PH I KV+V Sbjct: 241 DFKFEDFELVNYNPHPHIAGKVAV 264 >gi|291296233|ref|YP_003507631.1| thymidylate synthase [Meiothermus ruber DSM 1279] gi|290471192|gb|ADD28611.1| thymidylate synthase [Meiothermus ruber DSM 1279] Length = 264 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 172/264 (65%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+RHV++ G D+ DRTGVGTRS FGYQMRFDL +GFPL+TTKKVHWKSVV+ELL Sbjct: 1 MQQYHDLMRHVLEHGVDKSDRTGVGTRSVFGYQMRFDLRQGFPLVTTKKVHWKSVVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ +L +GV+IWDEWAD+ GELGP+YG QWRSW DG IDQ++ +++ +R Sbjct: 61 WFLRGETNIGFLRENGVTIWDEWADEAGELGPVYGKQWRSWAGPDGQTIDQLAWVLEEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + +MAL PCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVADLPQMALAPCHILFQFYVAQGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + GE IHTLGD HLY NHFEQA LQLSR PR LP + +NP + DL Sbjct: 181 YALLTHMVAQVTGLEPGELIHTLGDAHLYRNHFEQARLQLSREPRPLPTLRLNPAVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F Y+D L +Y PH I A V+V Sbjct: 241 AFTYDDIELLNYNPHPRIPAPVAV 264 >gi|24372913|ref|NP_716955.1| thymidylate synthase [Shewanella oneidensis MR-1] gi|32171834|sp|Q8EH94|TYSY_SHEON RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|24347042|gb|AAN54400.1|AE015577_10 thymidylate synthase [Shewanella oneidensis MR-1] Length = 264 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL Sbjct: 1 MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + VSIWDEWAD++G+LGP+YG QWRSWP G IDQIS ++ ++ Sbjct: 61 WFLKGDTNIAYLRDNKVSIWDEWADENGDLGPVYGAQWRSWPTQSGEAIDQISQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR PR LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPTMTILRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L +Y+PH I A V+V Sbjct: 241 DYQFDDFALSNYDPHPHIKAPVAV 264 >gi|307945915|ref|ZP_07661251.1| thymidylate synthase [Roseibium sp. TrichSKD4] gi|307771788|gb|EFO31013.1| thymidylate synthase [Roseibium sp. TrichSKD4] Length = 264 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G DR DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYLDLMQKVLDEGVDRGDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IWD+WAD++GELGP+YG QWRSWP DG IDQI +++ ++ Sbjct: 61 WFLSGDTNVRYLQENGVKIWDDWADENGELGPVYGYQWRSWPAPDGRSIDQIENLLTMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ANPESRRLIVSAWNPALVDEMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+H+ GD H+Y+NHF+Q QL R+PR LP M +NPN+ DL Sbjct: 181 YALLTMMIAQVTGLKSGDFVHSFGDAHIYHNHFDQVREQLIRTPRALPTMTLNPNVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+YEDF L Y PH I A ++V Sbjct: 241 AFKYEDFELTDYNPHPHIKAPIAV 264 >gi|37524624|ref|NP_927968.1| thymidylate synthase [Photorhabdus luminescens subsp. laumondii TTO1] gi|62901350|sp|Q7N8U4|TYSY_PHOLL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|36784049|emb|CAE12918.1| Thymidylate synthase (TS) (TSase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 264 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMTRVLAEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YLH +GV+IWDEWAD++G+LGP+YG QWR+W DG IDQ+ ++++ L+ Sbjct: 61 WFLNGDTNIKYLHENGVTIWDEWADENGDLGPVYGKQWRAWGTADGRQIDQLKTVLEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR+LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTKLQLSREPRSLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH I A V++ Sbjct: 241 DYKFDDFEIVDYDPHPGIKAPVAI 264 >gi|325293415|ref|YP_004279279.1| Thymidylate synthase [Agrobacterium sp. H13-3] gi|325061268|gb|ADY64959.1| Thymidylate synthase [Agrobacterium sp. H13-3] Length = 264 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 177/264 (67%), Positives = 226/264 (85%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV+ GSDR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLRHVMDTGSDRGDRTGTGTRSVFGYQMRFDLAEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+ ++++L+ Sbjct: 61 WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIALLIEALK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+HTLGD H+Y NHFEQA LQ++R+P+ LP M +NP++ DL Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHIYANHFEQAKLQMTRTPKALPTMRLNPDVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDFTL +YE + I A ++V Sbjct: 241 SFKFEDFTLENYEADSTIKAPIAV 264 >gi|222149084|ref|YP_002550041.1| thymidylate synthase [Agrobacterium vitis S4] gi|254790228|sp|B9JXQ5|TYSY_AGRVS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|221736069|gb|ACM37032.1| thymidylate synthase [Agrobacterium vitis S4] Length = 264 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 221/264 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV++ GSDR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLQHVMENGSDRGDRTGTGTRSVFGYQMRFDLAQGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GVSIWDEWAD++G+LGP+YG QWRSWP G IDQI+++V+S++ Sbjct: 61 WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPKPGGGHIDQIANLVESIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY NHFEQA LQL+R P+ LP M INP++ D+ Sbjct: 181 YALLTMMVAQVTGLKAGDFIHTLGDAHLYANHFEQARLQLTRQPKPLPVMRINPDVKDVF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF+L +Y I A ++V Sbjct: 241 GFAFEDFSLENYSADPVIKAPIAV 264 >gi|24114106|ref|NP_708616.1| thymidylate synthase [Shigella flexneri 2a str. 301] gi|30064168|ref|NP_838339.1| thymidylate synthase [Shigella flexneri 2a str. 2457T] gi|110806763|ref|YP_690283.1| thymidylate synthase [Shigella flexneri 5 str. 8401] gi|27735263|sp|P48464|TYSY_SHIFL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123146739|sp|Q0T137|TYSY_SHIF8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|24053240|gb|AAN44323.1| thymidylate synthetase [Shigella flexneri 2a str. 301] gi|30042425|gb|AAP18149.1| thymidylate synthetase [Shigella flexneri 2a str. 2457T] gi|110616311|gb|ABF04978.1| thymidylate synthetase [Shigella flexneri 5 str. 8401] gi|313647891|gb|EFS12337.1| thymidylate synthase [Shigella flexneri 2a str. 2457T] gi|332753548|gb|EGJ83928.1| thymidylate synthase [Shigella flexneri 4343-70] gi|332753684|gb|EGJ84063.1| thymidylate synthase [Shigella flexneri K-671] gi|332754710|gb|EGJ85076.1| thymidylate synthase [Shigella flexneri 2747-71] gi|332999926|gb|EGK19509.1| thymidylate synthase [Shigella flexneri K-218] gi|333015044|gb|EGK34387.1| thymidylate synthase [Shigella flexneri K-304] Length = 264 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH + A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGVKAPVAI 264 >gi|16766303|ref|NP_461918.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414948|ref|YP_152023.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181510|ref|YP_217927.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615936|ref|YP_001589901.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550126|ref|ZP_02343883.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993498|ref|ZP_02574592.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231096|ref|ZP_02656154.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236052|ref|ZP_02661110.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242768|ref|ZP_02667700.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168463843|ref|ZP_02697760.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820273|ref|ZP_02832273.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444087|ref|YP_002042250.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448836|ref|YP_002046971.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469951|ref|ZP_03075935.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735179|ref|YP_002115951.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248114|ref|YP_002147910.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197261701|ref|ZP_03161775.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363876|ref|YP_002143513.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243101|ref|YP_002216974.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204928268|ref|ZP_03219468.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353941|ref|YP_002227742.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858264|ref|YP_002244915.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238909779|ref|ZP_04653616.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|20455351|sp|Q8ZMA9|TYSY_SALTY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901208|sp|Q5PEN6|TYSY_SALPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|75505581|sp|Q57KB6|TYSY_SALCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036942|sp|A9N2L7|TYSY_SALPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|16421551|gb|AAL21877.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56129205|gb|AAV78711.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129143|gb|AAX66846.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365300|gb|ABX69068.1| hypothetical protein SPAB_03733 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402750|gb|ACF62972.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407140|gb|ACF67359.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456315|gb|EDX45154.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710681|gb|ACF89902.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633626|gb|EDX52040.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095353|emb|CAR60911.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211817|gb|ACH49214.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197239956|gb|EDY22576.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290918|gb|EDY30272.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937617|gb|ACH74950.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204322590|gb|EDZ07787.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273722|emb|CAR38715.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324734|gb|EDZ12573.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328467|gb|EDZ15231.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334514|gb|EDZ21278.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338222|gb|EDZ24986.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342942|gb|EDZ29706.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206710067|emb|CAR34422.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248135|emb|CBG25970.1| TS [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995141|gb|ACY90026.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159559|emb|CBW19078.1| Thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914020|dbj|BAJ37994.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087427|emb|CBY97192.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225677|gb|EFX50731.1| Thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613402|gb|EFY10343.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620994|gb|EFY17852.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624057|gb|EFY20891.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628203|gb|EFY24992.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633322|gb|EFY30064.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636100|gb|EFY32808.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322648813|gb|EFY45260.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655194|gb|EFY51504.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657975|gb|EFY54243.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664077|gb|EFY60276.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667045|gb|EFY63217.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673095|gb|EFY69202.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677915|gb|EFY73978.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681090|gb|EFY77123.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685686|gb|EFY81680.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715992|gb|EFZ07563.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131357|gb|ADX18787.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194825|gb|EFZ80012.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196576|gb|EFZ81724.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323205011|gb|EFZ89994.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207788|gb|EFZ92734.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212660|gb|EFZ97477.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214857|gb|EFZ99605.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323230655|gb|EGA14773.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234995|gb|EGA19081.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239033|gb|EGA23083.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244609|gb|EGA28615.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247224|gb|EGA31190.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323256400|gb|EGA40136.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262424|gb|EGA45980.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267480|gb|EGA50964.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269116|gb|EGA52571.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624741|gb|EGE31086.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629055|gb|EGE35398.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332989869|gb|AEF08852.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 264 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|226939715|ref|YP_002794788.1| thymidylate synthase [Laribacter hongkongensis HLHK9] gi|254790240|sp|C1D4I5|TYSY_LARHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226714641|gb|ACO73779.1| TysY [Laribacter hongkongensis HLHK9] Length = 264 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 180/264 (68%), Positives = 216/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L++HV+ G+D+ DRTG GTRS FGYQMRFDL++GFPLLTTKK+H +S+VHELL Sbjct: 1 MKAYLELMQHVLDHGTDKADRTGTGTRSVFGYQMRFDLAQGFPLLTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G+LGP+YG QWRSWP DG IDQIS ++ +R Sbjct: 61 WFLAGDTNIRYLKDNGVRIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQISGLLDMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPALVDDMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G Q GEF+HT GD HLY+NHFEQA LQL R PR LP M +NP + DL Sbjct: 181 YALLTLMVAQVTGLQPGEFVHTFGDAHLYSNHFEQARLQLQREPRALPVMKLNPVVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDFTL Y+PH I A+VSV Sbjct: 241 AFRFEDFTLEGYDPHPHIKAEVSV 264 >gi|296104486|ref|YP_003614632.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058945|gb|ADF63683.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 264 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|29347457|ref|NP_810960.1| thymidylate synthase [Bacteroides thetaiotaomicron VPI-5482] gi|253570671|ref|ZP_04848079.1| thymidylate synthase [Bacteroides sp. 1_1_6] gi|298385085|ref|ZP_06994644.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|62901371|sp|Q8A639|TYSY_BACTN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|29339357|gb|AAO77154.1| thymidylate synthase [Bacteroides thetaiotaomicron VPI-5482] gi|251839620|gb|EES67703.1| thymidylate synthase [Bacteroides sp. 1_1_6] gi|298262229|gb|EFI05094.1| thymidylate synthase [Bacteroides sp. 1_1_14] Length = 264 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N YL HGV IW+EWAD++G+LG IYG QWRSWPDYDG IDQIS V++++ Sbjct: 61 WFLQGDTNAKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYDGGFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA + M LPPCH FQFYV +G+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLKNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHTLGD H+Y NH +Q LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGEFIHTLGDAHIYLNHLDQVKLQLSREPRALPQMKINPDVKSIY 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I V+V Sbjct: 241 DFQFEDFELVNYDPHPHIAGIVAV 264 >gi|168261848|ref|ZP_02683821.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349106|gb|EDZ35737.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 264 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLMHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|159185026|ref|NP_355015.2| thymidylate synthase [Agrobacterium tumefaciens str. C58] gi|22096221|sp|Q8UDS3|TYSY_AGRT5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|159140300|gb|AAK87800.2| thymidylate synthase [Agrobacterium tumefaciens str. C58] Length = 264 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 227/264 (85%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV++ GSDR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLRHVMETGSDRGDRTGTGTRSVFGYQMRFDLSEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+ ++++L+ Sbjct: 61 WFLNGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIALLIEALK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V+G + G+F+HTLGD H+Y NHFEQA LQ++R+P+ LP M +NP++ +L Sbjct: 181 YALLTLMVAQVVGLKPGDFVHTLGDAHIYANHFEQAQLQMTRTPKALPTMRLNPDVKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +YE ++I A ++V Sbjct: 241 GFKFEDFTLENYEADSSIKAPIAV 264 >gi|91977820|ref|YP_570479.1| thymidylate synthase [Rhodopseudomonas palustris BisB5] gi|123735257|sp|Q134B1|TYSY_RHOPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91684276|gb|ABE40578.1| thymidylate synthase [Rhodopseudomonas palustris BisB5] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL ++ G+++ DRTG GT S FG+QMRF+L+ GFP+LTTK++ K++VHELL Sbjct: 1 MIQYHDLLERILSDGTEKHDRTGTGTLSVFGHQMRFNLAAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI++IV+ ++ Sbjct: 61 WFLQGDTNIKYLRDNGVTIWDEWADANGDLGPVYGAQWRSWPAADGRSIDQIANIVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A +D+MALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPADVDRMALPPCHCLFQFYVAGGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD HLY+NH EQA LQL+R+PR LP+M+I+P + D+ Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHLYSNHLEQARLQLTRAPRALPEMVIDPAVKDVF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDFTL+ Y+PH I A+V+V Sbjct: 241 GFRYEDFTLQGYDPHPHIKAEVAV 264 >gi|312964897|ref|ZP_07779137.1| thymidylate synthase [Escherichia coli 2362-75] gi|312290453|gb|EFR18333.1| thymidylate synthase [Escherichia coli 2362-75] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLS PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSCEPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|30352180|gb|AAP31579.1| thymidylate synthase [Shigella flexneri] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 151/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH + V+IWD+WAD++G+LGP++G QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIGYLHENNVTIWDDWADENGDLGPVFGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY NH +Q LQLSR PR LP++II + Sbjct: 181 YTLLVHMMAQQCDLEVGDFVWTGGDTHLYTNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|163852080|ref|YP_001640123.1| thymidylate synthase [Methylobacterium extorquens PA1] gi|163663685|gb|ABY31052.1| Thymidylate synthase [Methylobacterium extorquens PA1] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL Sbjct: 1 MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GV+IWDEWAD +G+LGP+YG QWRSW DG +DQI+ I+ + Sbjct: 61 WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGGTVDQIAWILDEIA 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV NG+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVANGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY NH EQ LQLSR PR LP++ +NP + L Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + YEPH AI A V+V Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264 >gi|187731322|ref|YP_001881432.1| thymidylate synthase [Shigella boydii CDC 3083-94] gi|187428314|gb|ACD07588.1| thymidylate synthase [Shigella boydii CDC 3083-94] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP D IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDRRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|317130117|ref|YP_004096399.1| thymidylate synthase [Bacillus cellulosilyticus DSM 2522] gi|315475065|gb|ADU31668.1| thymidylate synthase [Bacillus cellulosilyticus DSM 2522] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 157/264 (59%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL +H+++ G+++ DRTG GT STFGYQMRF+L+ GFP+LTTKK+ ++++HELL Sbjct: 1 MRQYHDLCKHILENGTEKTDRTGTGTISTFGYQMRFNLNDGFPVLTTKKLALRAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL + V IW+EWAD++G+LGP+YG QWRSWP G IDQ+ ++++ ++ Sbjct: 61 WFIKGDTNIRYLQENNVRIWNEWADENGDLGPVYGKQWRSWPTPSGETIDQLGNVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWNVA +DKMAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPDSRRLVVNAWNVADLDKMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G YG+F+HT GDVH+Y NH EQ +LQL+R PR LP M +NP + + Sbjct: 181 YALLTMMIARECGLDYGDFVHTFGDVHIYKNHIEQVNLQLTRDPRPLPTMKLNPEVKRIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+ EDF L Y+PH I +VSV Sbjct: 241 DFKIEDFELVGYDPHPHIKGEVSV 264 >gi|154252890|ref|YP_001413714.1| thymidylate synthase [Parvibaculum lavamentivorans DS-1] gi|171769615|sp|A7HVX4|TYSY_PARL1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|154156840|gb|ABS64057.1| Thymidylate synthase [Parvibaculum lavamentivorans DS-1] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 174/264 (65%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R G + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H KS++HELL Sbjct: 1 MQQYLDLMRLARDTGVTKTDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ GD+N YL +GVSIWD+WAD++GELGP+YG QWRSWP DG IDQI ++V+ ++ Sbjct: 61 WFIAGDTNTRYLKANGVSIWDDWADENGELGPVYGHQWRSWPTPDGGKIDQIRNLVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D MALPPCHCLFQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVADVDSMALPPCHCLFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLY NH EQAD QL+R P+ LP M INP++ L Sbjct: 181 YALLTMMVAQVTGLKPGEFIHTFGDAHLYLNHLEQADKQLAREPKKLPVMHINPDVKSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y+DFTL YE H I A V+V Sbjct: 241 DFTYDDFTLEGYEAHPHISAPVAV 264 >gi|200387449|ref|ZP_03214061.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604547|gb|EDZ03092.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+W DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWSTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|298293052|ref|YP_003694991.1| thymidylate synthase [Starkeya novella DSM 506] gi|296929563|gb|ADH90372.1| thymidylate synthase [Starkeya novella DSM 506] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +LL V++ G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK+H +S++HELL Sbjct: 1 MRQYHELLERVLREGTRKDDRTGTGTLSLFGHQMRFDLAEGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL +GVSIWDEWAD +G+LGP+YG QWRSWPD G VIDQI+ ++ +R Sbjct: 61 WFLAGDTNIAYLKENGVSIWDEWADANGDLGPVYGHQWRSWPDGRGGVIDQIAQVLSDIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A + +MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADVPQMALPPCHCLFQFYVLDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HTLGD HLY NH EQA QLSR+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQVTGLKPGDFVHTLGDAHLYVNHVEQAHEQLSRAPRKLPALKLNPAVDDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|253998589|ref|YP_003050652.1| thymidylate synthase [Methylovorus sp. SIP3-4] gi|253985268|gb|ACT50125.1| thymidylate synthase [Methylovorus sp. SIP3-4] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 168/264 (63%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G + DRTG GT S FGYQMRFDL+ GFPLLTTKKVH KS++HELL Sbjct: 1 MQTYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAAGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV+IWDEWAD +G LGP+YG QWR+WP DG+ IDQI+ +V++++ Sbjct: 61 WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGSHIDQITQVVEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ QLSR+PR+LP M INP++ D+ Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYLNHMEQVKEQLSRTPRSLPTMQINPDVRDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF+L++Y+P+ I A V+V Sbjct: 241 AFRYEDFSLQNYDPYPPIKAPVAV 264 >gi|240139408|ref|YP_002963883.1| thymidylate synthetase [Methylobacterium extorquens AM1] gi|240009380|gb|ACS40606.1| thymidylate synthetase [Methylobacterium extorquens AM1] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL Sbjct: 1 MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GV+IWDEWAD +G+LGP+YG QWRSW DG +DQI+ I+ + Sbjct: 61 WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGGTVDQIAWILDEIA 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY NH EQ LQLSR PR LP++ +NP + L Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + YEPH AI A V+V Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264 >gi|298370125|ref|ZP_06981441.1| thymidylate synthase [Neisseria sp. oral taxon 014 str. F0314] gi|298281585|gb|EFI23074.1| thymidylate synthase [Neisseria sp. oral taxon 014 str. F0314] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 174/264 (65%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G D+ DRTG GTRS FGYQMRFDLSKGFPLLTTKK+H +S++HELL Sbjct: 1 MKAYHDLMRHVLEHGIDKSDRTGTGTRSVFGYQMRFDLSKGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++ + ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVTEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHTMFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEFIHT GD HLY+NH EQA LQLSR R LP+M INP + DL Sbjct: 181 YALLTMMMAQVCRLKIGEFIHTFGDAHLYSNHMEQAKLQLSRDFRPLPEMKINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F++EDF L Y PH I A+V+V Sbjct: 241 AFKFEDFELTGYNPHPHIKAEVAV 264 >gi|92118240|ref|YP_577969.1| thymidylate synthase [Nitrobacter hamburgensis X14] gi|123265118|sp|Q1QJT8|TYSY_NITHX RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91801134|gb|ABE63509.1| thymidylate synthase [Nitrobacter hamburgensis X14] Length = 264 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+QY DLL ++ G+++ DRTG GT S FG+QMRF+L+ GFP+LTTKK+ KS+VHELL Sbjct: 1 MNQYHDLLERILSDGAEKHDRTGTGTLSIFGHQMRFNLASGFPMLTTKKLPLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV YL HGVSIWDEWAD +G+LGP+YG QWRSWP DG IDQI+++V + Sbjct: 61 WFLKGETNVRYLREHGVSIWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIANVVDMIG 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A +DKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RSPDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+H+LGD HLY NH +QA LQL+R R+LP M INP + + Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYLNHLDQARLQLTRPTRSLPTMTINPEVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF L +Y+PH I A+V+V Sbjct: 241 AFRYEDFKLENYDPHPHIKAEVAV 264 >gi|2098345|pdb|1KCE|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|2098346|pdb|1KCE|B Chain B, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|2392565|pdb|1TLS|A Chain A, Thymidylate Synthase Ternary Complex With Fdump And Methylenetetrahydrofolate gi|2392566|pdb|1TLS|B Chain B, Thymidylate Synthase Ternary Complex With Fdump And Methylenetetrahydrofolate gi|9257011|pdb|1F4B|A Chain A, Crystal Structure Of Escherichia Coli Thymidylate Synthase gi|9257012|pdb|1F4C|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase Covalently Modified At C146 With N-[tosyl-D-Prolinyl]amino- Ethanethiol gi|9257013|pdb|1F4C|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase Covalently Modified At C146 With N-[tosyl-D-Prolinyl]amino- Ethanethiol gi|9257016|pdb|1F4E|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Tosyl-D-Proline gi|9257017|pdb|1F4F|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Sp-722 gi|9257018|pdb|1F4F|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Sp-722 gi|15988332|pdb|1JTQ|A Chain A, E. Coli Ts Complex With Dump And The Pyrrolo(2,3-D) Pyrimidine-Based Antifolate Ly341770 gi|15988333|pdb|1JTQ|B Chain B, E. Coli Ts Complex With Dump And The Pyrrolo(2,3-D) Pyrimidine-Based Antifolate Ly341770 gi|15988334|pdb|1JTU|A Chain A, E. Coli Thymidylate Synthase In A Complex With Dump And Ly338913, A Polyglutamylated Pyrrolo(2,3-D)pyrimidine- Based Antifolate gi|15988335|pdb|1JTU|B Chain B, E. Coli Thymidylate Synthase In A Complex With Dump And Ly338913, A Polyglutamylated Pyrrolo(2,3-D)pyrimidine- Based Antifolate gi|15988346|pdb|1JUT|A Chain A, E. Coli Thymidylate Synthase Bound To Dump And Ly338529, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988347|pdb|1JUT|B Chain B, E. Coli Thymidylate Synthase Bound To Dump And Ly338529, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|21730588|pdb|1KZI|A Chain A, Crystal Structure Of EctsDUMPTHF COMPLEX gi|21730589|pdb|1KZI|B Chain B, Crystal Structure Of EctsDUMPTHF COMPLEX gi|82407729|pdb|2A9W|A Chain A, E. Coli Ts Complexed With Dump And Inhibitor Ga9 gi|82407730|pdb|2A9W|B Chain B, E. Coli Ts Complexed With Dump And Inhibitor Ga9 gi|82407731|pdb|2A9W|C Chain C, E. Coli Ts Complexed With Dump And Inhibitor Ga9 gi|82407732|pdb|2A9W|D Chain D, E. Coli Ts Complexed With Dump And Inhibitor Ga9 gi|93279929|pdb|2G8O|A Chain A, High Resolution Structure Of Escherichia Coli Thymidylate Synthase Ternary Complex With Dump And A Cofactor Analog, Cb3717 gi|93279930|pdb|2G8O|B Chain B, High Resolution Structure Of Escherichia Coli Thymidylate Synthase Ternary Complex With Dump And A Cofactor Analog, Cb3717 gi|99032326|pdb|2FTQ|A Chain A, E. Coli Thymidylate Synthase At 1.8 A Resolution gi|157834019|pdb|1TSN|A Chain A, Thymidylate Synthase Ternary Complex With Fdump And Methylenetetrahydrofolate gi|215261129|pdb|3B9H|A Chain A, E. Coli Thymidylate Synthase Complexed With 5-Nitro-2'- Deoxy Uridine gi|215794590|pdb|3BHL|A Chain A, E.Coli Thymidylate Synthase Complexes With 5-No2dump And Tetrahydrofolate At 1.4 A Resolution gi|215794591|pdb|3BHL|B Chain B, E.Coli Thymidylate Synthase Complexes With 5-No2dump And Tetrahydrofolate At 1.4 A Resolution gi|215794592|pdb|3BHR|A Chain A, E. Coli Ts Complexed With 5-No2dump And Tetrahydrofolate At 1.9 A Resolution (Space Group 152) Length = 264 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 152/263 (57%), Positives = 200/263 (76%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|16761778|ref|NP_457395.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143262|ref|NP_806604.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051490|ref|ZP_03344368.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213579810|ref|ZP_03361636.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213622588|ref|ZP_03375371.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213850170|ref|ZP_03381068.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|20455348|sp|Q8Z412|TYSY_SALTI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|25286009|pir||AB0866 thymidylate synthetase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504080|emb|CAD02826.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138895|gb|AAO70464.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 264 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|261342247|ref|ZP_05970105.1| thymidylate synthase [Enterobacter cancerogenus ATCC 35316] gi|288315583|gb|EFC54521.1| thymidylate synthase [Enterobacter cancerogenus ATCC 35316] Length = 264 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH +Q LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|188534879|ref|YP_001908676.1| thymidylate synthase [Erwinia tasmaniensis Et1/99] gi|188029921|emb|CAO97805.1| Thymidylate synthase [Erwinia tasmaniensis Et1/99] Length = 264 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLALMQHVLEQGTPKDDRTGTGTLSVFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL + VSIWDEWAD++G+LGP+YG QWRSW DG+ IDQ+S +++ L+ Sbjct: 61 WFLKGETNIAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGAADGHQIDQLSKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +D+MAL PCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL R PR LP+++I L Sbjct: 181 YALLVHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH AI A V++ Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAI 264 >gi|325283967|ref|YP_004256508.1| Thymidylate synthase [Deinococcus proteolyticus MRP] gi|324315776|gb|ADY26891.1| Thymidylate synthase [Deinococcus proteolyticus MRP] Length = 264 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L H+++ G+D+ DRTG GTRS FGYQMRFDL +GFPL+TTK+VH KSV++ELL Sbjct: 1 MRQYLDYLSHIMEHGTDKADRTGTGTRSVFGYQMRFDLQQGFPLVTTKRVHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG+SNV +L HGV+IWDEWA + G+LGP+YGVQWRSWPDY G IDQI+ +++ ++ Sbjct: 61 WFLRGESNVGWLQDHGVTIWDEWAREGGKLGPVYGVQWRSWPDYGGGQIDQIAQVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA + +MALPPCH LFQFYV +G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 QNPDSRRLIVSAWNVAQVGEMALPPCHLLFQFYVADGRLSCQLYQRSADSFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEF+ T GD H+Y+NHFEQ + QL R PR LP+M +NP + D+ Sbjct: 181 YALLTMMVAQVCDLEPGEFVWTGGDCHVYHNHFEQVERQLKREPRPLPKMHLNPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDFTL Y+PH I A+V+V Sbjct: 241 AFRYEDFTLEGYDPHPGIKAEVAV 264 >gi|259909498|ref|YP_002649854.1| thymidylate synthase [Erwinia pyrifoliae Ep1/96] gi|224965120|emb|CAX56652.1| Thymidylate synthase [Erwinia pyrifoliae Ep1/96] Length = 264 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+S +++ L+ Sbjct: 61 WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +++MAL PCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL R PR LP+++I L Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH AI A V++ Sbjct: 241 DYCFDDFEIEGYDPHPAIKAPVAI 264 >gi|99032324|pdb|2FTN|A Chain A, E. Coli Thymidylate Synthase Y94f Mutant gi|99032325|pdb|2FTO|X Chain X, Y94f Mutant Of Thymidylate Synthase Bound To Thymidine-5'- Phosphate And 10-Propargyl-5,8-Dideazafolid Acid Length = 264 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 200/263 (76%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP++G QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVFGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|265766866|ref|ZP_06094695.1| thymidylate synthase [Bacteroides sp. 2_1_16] gi|263253243|gb|EEZ24719.1| thymidylate synthase [Bacteroides sp. 2_1_16] Length = 264 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD+ G+LG +YG QWRSWP YDG IDQIS V +++ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHVYGYQWRSWPTYDGGFIDQISEAVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I KV+V Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264 >gi|188582027|ref|YP_001925472.1| thymidylate synthase [Methylobacterium populi BJ001] gi|179345525|gb|ACB80937.1| Thymidylate synthase [Methylobacterium populi BJ001] Length = 264 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDLS+GFPL+TTK++H +S+VHELL Sbjct: 1 MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLSEGFPLVTTKQLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GV+IWDEWAD +G+LGP+YG QWRSW DG +DQI+ I+ + Sbjct: 61 WFLKGDTNVAYLRENGVTIWDEWADANGDLGPVYGRQWRSWAKPDGGTVDQIAWILDEIA 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVAEGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY NH +QA LQLSR+PR LP++ +NP + L Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLDQARLQLSRAPRALPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + YEPH AI A V+V Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264 >gi|310766593|gb|ADP11543.1| thymidylate synthetase [Erwinia sp. Ejp617] Length = 264 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+S +++ L+ Sbjct: 61 WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLSKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +DKMAL PCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL R PR LP+++I L Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH AI A V++ Sbjct: 241 DYCFDDFEIEGYDPHPAIKAPVAI 264 >gi|238764009|ref|ZP_04624965.1| Thymidylate synthase [Yersinia kristensenii ATCC 33638] gi|238697826|gb|EEP90587.1| Thymidylate synthase [Yersinia kristensenii ATCC 33638] Length = 264 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S +VQ L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q +LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHIDQTNLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A +++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264 >gi|313200661|ref|YP_004039319.1| thymidylate synthase [Methylovorus sp. MP688] gi|312439977|gb|ADQ84083.1| thymidylate synthase [Methylovorus sp. MP688] Length = 264 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 168/264 (63%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G + DRTG GT S FGYQMRFDL+ GFPLLTTKKVH KS++HELL Sbjct: 1 MQTYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAAGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV+IWDEWAD +G LGP+YG QWR+WP DG+ IDQI+ +V +++ Sbjct: 61 WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGSHIDQITQVVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ QLSR+PR+LP M INP++ D+ Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYLNHMEQVKEQLSRTPRSLPTMQINPDVRDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDF+L++Y+P+ I A V+V Sbjct: 241 AFRYEDFSLQNYDPYPPIKAPVAV 264 >gi|218530838|ref|YP_002421654.1| Thymidylate synthase [Methylobacterium chloromethanicum CM4] gi|254790242|sp|B7KQG2|TYSY_METC4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|218523141|gb|ACK83726.1| Thymidylate synthase [Methylobacterium chloromethanicum CM4] Length = 264 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL Sbjct: 1 MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GV+IWDEWAD +G+LGP+YG QWRSW +G +DQI+ I+ + Sbjct: 61 WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPEGGTVDQIAWILDEIA 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY NH EQ LQLSR PR LP++ +NP + L Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + YEPH AI A V+V Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264 >gi|224584790|ref|YP_002638588.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254790248|sp|C0PXI9|TYSY_SALPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|224469317|gb|ACN47147.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 264 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKHCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|332883236|gb|EGK03519.1| thymidylate synthase [Dysgonomonas mossii DSM 22836] Length = 264 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+ V+ G+ + DRTG GT S FG+Q R++L++GFP+LTTKK+H KS+++ELL Sbjct: 1 MKQYHDLLKRVLAEGTFKEDRTGTGTISVFGHQSRYNLAEGFPVLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL HGV IW+EWAD++G+LG IYG QWRSWPDY+G +DQI++ V++++ Sbjct: 61 WFLAGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGYVDQITNAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA + M LPPCH FQFYV +GKLS QLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVADLPNMNLPPCHAFFQFYVADGKLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q GEF+HTLGD H+Y NH +Q LQL+R R LPQMIINP + + Sbjct: 181 YALLLKMMAQVTGLQEGEFVHTLGDAHIYTNHLDQVKLQLTRDFRPLPQMIINPEVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+PH I +V+V Sbjct: 241 DFKYEDFQLEGYDPHPHIKGEVAV 264 >gi|254561824|ref|YP_003068919.1| thymidylate synthetase [Methylobacterium extorquens DM4] gi|254269102|emb|CAX25065.1| thymidylate synthetase [Methylobacterium extorquens DM4] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL Sbjct: 1 MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GV+IWDEWAD +G+LGP+YG QWRSW DG+ +DQI+ I+ + Sbjct: 61 WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGSTVDQIAWILDEIA 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY NH EQ LQLSR PR LP++ +NP + L Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + YEPH AI A V+V Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264 >gi|312887675|ref|ZP_07747266.1| thymidylate synthase [Mucilaginibacter paludis DSM 18603] gi|311299854|gb|EFQ76932.1| thymidylate synthase [Mucilaginibacter paludis DSM 18603] Length = 273 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 171/273 (62%), Positives = 209/273 (76%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV+ G+ + DRTG GT S FGYQMRF+L GFPL+TTKK+H KS++HEL+ Sbjct: 1 MKQYLDLMRHVLDTGAQKHDRTGTGTISVFGYQMRFNLQDGFPLVTTKKLHLKSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD DG LGP+YG QWRSWP DG IDQIS+++ +L+ Sbjct: 61 WFLSGDTNIRYLKENGVRIWDEWADADGNLGPVYGYQWRSWPKPDGGHIDQISNVINTLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---------DNGKLSCQLYQRSGDVF 171 +P SRR +VSAWNVA +++MALPPCH LFQFYV GKLSCQLYQRS D+F Sbjct: 121 NNPDSRRIMVSAWNVADVEQMALPPCHSLFQFYVQPADAAKGETRGKLSCQLYQRSADIF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V + G+FIHTLGD HLYNNH EQ LQLSR PR LP M Sbjct: 181 LGVPFNIASYALLTMMVAQVCNLEAGDFIHTLGDAHLYNNHIEQTRLQLSREPRPLPLMK 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP++ D+ F++EDF L +Y+PH I V+V Sbjct: 241 INPDVKDIFGFKFEDFVLENYDPHPHIKGAVAV 273 >gi|241662502|ref|YP_002980862.1| thymidylate synthase [Ralstonia pickettii 12D] gi|240864529|gb|ACS62190.1| thymidylate synthase [Ralstonia pickettii 12D] Length = 280 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L GFPL+TTKKVH KS+V+ELL Sbjct: 17 MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 76 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGP+YG QWRSWP +G IDQI+ ++ ++ Sbjct: 77 WFLQGSTNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 136 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 137 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 196 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G G+F+ T GD HLYNNHFEQ + QL+R P LP++ I + Sbjct: 197 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLAREPLPLPKLHIKRKPESIF 256 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H AI A V+V Sbjct: 257 DYQYEDFEIVGYQSHPAIKAPVAV 280 >gi|60682981|ref|YP_213125.1| thymidylate synthase [Bacteroides fragilis NCTC 9343] gi|81313963|sp|Q5L9L6|TYSY_BACFN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|60494415|emb|CAH09211.1| putative thymidylate synthase B [Bacteroides fragilis NCTC 9343] gi|301164446|emb|CBW24004.1| putative thymidylate synthase B [Bacteroides fragilis 638R] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD+ G+LG IYG QWRSWP YDG IDQIS V +++ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYDGGFIDQISEAVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I KV+V Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264 >gi|288926918|ref|ZP_06420817.1| thymidylate synthase [Prevotella buccae D17] gi|288336316|gb|EFC74698.1| thymidylate synthase [Prevotella buccae D17] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR ++ G+ + DRTG GT S FG+QMRF+L +G PLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLRRILDEGTPKGDRTGTGTLSVFGHQMRFNLEEGLPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LGP+YG QWRSWPDY G IDQI +++ ++ Sbjct: 61 WFLKGDTNVRYLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWN A +D MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HTPDSRRMMVSAWNPAEVDDMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHT GD HLY NH QA LQL+R+PR LP M +NP + L Sbjct: 181 YALLTMMMAQVTGLRPGDFIHTTGDTHLYQNHLSQARLQLTRTPRPLPTMRLNPEVKSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDFTL +Y+P+ I A VSV Sbjct: 241 DFRFEDFTLENYDPYDHIKATVSV 264 >gi|163758991|ref|ZP_02166077.1| thymidylate synthase protein [Hoeflea phototrophica DFL-43] gi|162283395|gb|EDQ33680.1| thymidylate synthase protein [Hoeflea phototrophica DFL-43] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLR V+ G DR DRTG GT S FG+QMRFDL+ GFP LTTKK+H +S++HELL Sbjct: 1 MQQYHDLLRLVLDQGFDRDDRTGTGTLSVFGHQMRFDLAAGFPALTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +G+SIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGDTNIAYLKANGISIWDEWADENGDLGPVYGAQWRSWPAPDGTTIDQIANVVRQIE 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPSSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY NHF+QA LQLSR RTLP M INP I DL Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDAHLYKNHFDQAHLQLSRESRTLPVMRINPEITDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F Y+DF L Y+PH AI A ++V Sbjct: 241 AFTYDDFKLEGYDPHPAISAPIAV 264 >gi|332877806|ref|ZP_08445545.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684271|gb|EGJ57129.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL +++ G ++ DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLHRILEEGVEKSDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG IYG QWRSWPDY G IDQI V +++ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQIQEAVDTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV + M LPPCH FQFYV NGKLS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLGNMNLPPCHAFFQFYVANGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V G + G+F+HTLGD H+Y NH EQ LQL+R PR LP+M +NP++ + Sbjct: 181 YALLLMMMAQVTGLKAGDFVHTLGDTHIYKNHLEQVKLQLTREPRPLPRMKLNPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL Y P I VSV Sbjct: 241 DFKFEDFTLEDYNPWPHIAGAVSV 264 >gi|292487189|ref|YP_003530061.1| thymidylate synthetase [Erwinia amylovora CFBP1430] gi|292900435|ref|YP_003539804.1| thymidylate synthase [Erwinia amylovora ATCC 49946] gi|291200283|emb|CBJ47411.1| thymidylate synthase [Erwinia amylovora ATCC 49946] gi|291552608|emb|CBA19653.1| thymidylate synthetase [Erwinia amylovora CFBP1430] gi|312171289|emb|CBX79548.1| thymidylate synthetase [Erwinia amylovora ATCC BAA-2158] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLALMQHVLEQGAPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+S +++ L+ Sbjct: 61 WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +D+MAL PCH LFQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SDPDSRRMIVSAWNVGELDQMALAPCHALFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQA LQL R P LP+++I L Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPHALPKLLIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH AI A V+V Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAV 264 >gi|311746545|ref|ZP_07720330.1| thymidylate synthase [Algoriphagus sp. PR1] gi|126575445|gb|EAZ79777.1| thymidylate synthase [Algoriphagus sp. PR1] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 165/264 (62%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ ++ G + DRTG GT+S FG+QMRFDLSKGFP++TTKK+H +S++ ELL Sbjct: 1 MKQYHDLMQKILDEGVTKGDRTGTGTKSIFGHQMRFDLSKGFPVVTTKKLHLRSIIIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GDSN++YL + VSIWDEWAD++G+LGP+YG QWR WPD G IDQI +++ ++ Sbjct: 61 WFLKGDSNINYLKENKVSIWDEWADENGDLGPVYGYQWRHWPDGKGGEIDQIKNLIHQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRRHIVSAWNVA +D+MALPPCH +FQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TKPDSRRHIVSAWNVADVDQMALPPCHTIFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+L TMM+A V + G+F+HT GD HLY+NH EQA LQLSR R LP M INP + D+ Sbjct: 181 YALFTMMIAQVCDLEVGDFVHTFGDAHLYSNHLEQAKLQLSREIRDLPTMKINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y+PH I A V+V Sbjct: 241 DFKYEDFELINYDPHPHIKAAVAV 264 >gi|229915874|ref|YP_002884520.1| thymidylate synthase [Exiguobacterium sp. AT1b] gi|259550780|sp|C4L1C9|TYSY_EXISA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|229467303|gb|ACQ69075.1| thymidylate synthase [Exiguobacterium sp. AT1b] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RH++ G + DRTG GT S FGYQMRF+L +GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYHDLCRHILDQGVVKEDRTGTGTTSVFGYQMRFNLQEGFPLITTKKLHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ G++NV YL +GV IW+EWAD++G LGP+YG QWRS+P DG+ +DQ++ +++ ++ Sbjct: 61 WFISGETNVRYLQDNGVRIWNEWADEEGNLGPVYGSQWRSFPRPDGSSVDQLAQVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN +++MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNPGQLEEMALPPCHLLFQFYVADGKLSCQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HTLGD H+Y+NH EQ +LQLSR PR LP++ I ++ + Sbjct: 181 YALLTHMVAHVTGLEVGDFVHTLGDAHIYHNHLEQVELQLSRDPRPLPKLNIVRDVSSIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFR+EDF + Y+PH I +VSV Sbjct: 241 SFRFEDFEILGYDPHPHIKGEVSV 264 >gi|9257019|pdb|1F4G|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Sp-876 gi|9257020|pdb|1F4G|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Sp-876 Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 152/263 (57%), Positives = 199/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMXAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|290476668|ref|YP_003469573.1| thymidylate synthetase [Xenorhabdus bovienii SS-2004] gi|289176006|emb|CBJ82809.1| thymidylate synthetase [Xenorhabdus bovienii SS-2004] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEDGTAKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ++ +++ L+ Sbjct: 61 WFLNGDTNTQYLRDNNVTIWDEWADENGDLGPVYGKQWRAWSSADGRQIDQLAKVLEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +DKMAL PCH FQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAEGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MLA + G+F+ T GD HLY+NH EQ LQLSR PRTLP++II L Sbjct: 181 YALLVHMLAQQCDLEVGDFVWTGGDTHLYSNHLEQTKLQLSREPRTLPKLIIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIVDYDPHPGIKAPVAI 264 >gi|271499466|ref|YP_003332491.1| thymidylate synthase [Dickeya dadantii Ech586] gi|270343021|gb|ACZ75786.1| thymidylate synthase [Dickeya dadantii Ech586] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YLH + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ+ ++++ L+ Sbjct: 61 WFLNGDTNVGYLHDNKVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLQTVLRQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYNNHLEQTRLQLSREPRPLPKLVIKRRPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V+V Sbjct: 241 DYRFEDFDIEGYDPHPAIKAPVAV 264 >gi|293394670|ref|ZP_06638962.1| thymidylate synthase [Serratia odorifera DSM 4582] gi|291422796|gb|EFE96033.1| thymidylate synthase [Serratia odorifera DSM 4582] Length = 264 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLAEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ+S+++Q L+ Sbjct: 61 WFLNGDTNTAYLRDNKVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVLQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +++MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRPLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH AI A V++ Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAI 264 >gi|238754836|ref|ZP_04616187.1| Thymidylate synthase [Yersinia ruckeri ATCC 29473] gi|238706996|gb|EEP99362.1| Thymidylate synthase [Yersinia ruckeri ATCC 29473] Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLDEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S +V+ L+ Sbjct: 61 WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCHLEVGDFVWTGGDTHLYNNHMEQTQLQLSREPRALPKLVIKRKPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+PH AI A V++ Sbjct: 241 DYHFEDFEIEGYDPHPAIKAPVAI 264 >gi|9955004|pdb|1FFL|A Chain A, Crystal Structure Of The Apo-Thymidylate Synthase R166q Mutant gi|39654046|pdb|1FWM|A Chain A, Crystal Structure Of The Thymidylate Synthase R166q Mutant gi|39654047|pdb|1FWM|B Chain B, Crystal Structure Of The Thymidylate Synthase R166q Mutant Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 200/263 (76%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQ+S DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQQSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|4140014|pdb|1DNA|A Chain A, D221(169)n Mutant Does Not Promote Opening Of The Cofactor Imidazolidine Ring gi|4140015|pdb|1DNA|B Chain B, D221(169)n Mutant Does Not Promote Opening Of The Cofactor Imidazolidine Ring gi|157830345|pdb|1BJG|A Chain A, D221(169)n Mutant Does Not Promote Opening Of The Cofactor Imidazolidine Ring Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 200/263 (76%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS +VFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCNVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|120599815|ref|YP_964389.1| thymidylate synthase [Shewanella sp. W3-18-1] gi|146292249|ref|YP_001182673.1| thymidylate synthase [Shewanella putrefaciens CN-32] gi|166231733|sp|A4Y4J1|TYSY_SHEPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231735|sp|A1RME0|TYSY_SHESW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120559908|gb|ABM25835.1| thymidylate synthase [Shewanella sp. W3-18-1] gi|145563939|gb|ABP74874.1| thymidylate synthase [Shewanella putrefaciens CN-32] gi|319425548|gb|ADV53622.1| thymidylate synthase [Shewanella putrefaciens 200] Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL Sbjct: 1 MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL + VSIWDEWAD +G+LGP+YG QWRSWP G+ IDQIS ++ ++ Sbjct: 61 WFLKGETNIAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 AQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR P+ LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTVLQLSREPKPLPLMTILRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF L +Y PH I A V+V Sbjct: 241 DYQFEDFELTNYNPHPHIKAPVAV 264 >gi|187927913|ref|YP_001898400.1| thymidylate synthase [Ralstonia pickettii 12J] gi|187724803|gb|ACD25968.1| Thymidylate synthase [Ralstonia pickettii 12J] Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L GFPL+TTKKVH KS+V+ELL Sbjct: 1 MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGP+YG QWRSWP +G IDQI+ ++ ++ Sbjct: 61 WFLQGSTNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G G+F+ T GD HLYNNHFEQ QL+R P LP++II + Sbjct: 181 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVQTQLAREPLPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H AI A V+V Sbjct: 241 DYQYEDFEILGYQSHPAIKAPVAV 264 >gi|161506456|ref|YP_001573568.1| thymidylate synthase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189036941|sp|A9MS82|TYSY_SALAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|160867803|gb|ABX24426.1| hypothetical protein SARI_04659 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG+ IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGHHIDQITTVLSQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV + KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADRKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+FI T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEAGDFIWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264 >gi|218463520|ref|ZP_03503611.1| thymidylate synthase [Rhizobium etli Kim 5] Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 175/264 (66%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HVI+ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MQQYLDLLKHVIENGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ + Sbjct: 61 WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLIKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPNSRRHIVSAWNPAEVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY+NHFEQA LQL+R P+ LP M INP++ D+ Sbjct: 181 YALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFEQAKLQLTRRPKPLPFMRINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L YE A+I A ++V Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264 >gi|253566116|ref|ZP_04843570.1| thymidylate synthase [Bacteroides sp. 3_2_5] gi|251945220|gb|EES85658.1| thymidylate synthase [Bacteroides sp. 3_2_5] Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD+ G+LG IYG QWRSWP Y+G IDQIS V +++ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYNGGFIDQISEAVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I KV+V Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264 >gi|149279349|ref|ZP_01885480.1| thymidylate synthetase [Pedobacter sp. BAL39] gi|149229875|gb|EDM35263.1| thymidylate synthetase [Pedobacter sp. BAL39] Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+ + DRTG GT S FGYQMRF+L +GFP++TTKK+H KS++HEL+ Sbjct: 1 MKQYLDLMQHVLDHGTQKHDRTGTGTISVFGYQMRFNLQEGFPMVTTKKLHLKSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G LGP+YG QWRSWP DG IDQIS IV +++ Sbjct: 61 WFLSGDTNIKYLKDNGVKIWDEWADENGNLGPVYGSQWRSWPTPDGRHIDQISQIVNTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I++MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVADIEEMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G +YG+FIHT GD HLYNNH EQA LQLSR R LP M INP + +LL Sbjct: 181 YALLTMMVAQVCGLEYGDFIHTFGDAHLYNNHIEQAKLQLSRDIRPLPVMEINPEVKNLL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL+ Y+PH I V+V Sbjct: 241 DFKFEDFTLKGYDPHPHIKGAVAV 264 >gi|332975369|gb|EGK12263.1| thymidylate synthase [Desmospora sp. 8437] Length = 264 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL + ++K G+ + DRTG GT S FG+QMRFDL +GFPL+TTKK+H +S++HELL Sbjct: 1 MKAYLDLCQRILKEGTRKEDRTGTGTLSLFGHQMRFDLGEGFPLVTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N+ YL H V IW+EWAD++G+LGP+YG QWRS+ DG +DQI +V ++ Sbjct: 61 WFLQGSTNIRYLQEHQVRIWNEWADENGDLGPVYGKQWRSFSGADGKTVDQIQWVVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN +++MALPPCHCLFQFYV +G LSCQLYQRSGD FLGIPFNIAS Sbjct: 121 RNPDSRRLIVSAWNPTELEEMALPPCHCLFQFYVKDGTLSCQLYQRSGDTFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + GEFIHTLGD HLY NH +Q QL+R P LP + +NP++ + Sbjct: 181 YALLTHMIAHVTGLKPGEFIHTLGDAHLYLNHLDQVKEQLTRQPLPLPTLKLNPDVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YED + Y+ H I +VSV Sbjct: 241 DFTYEDIRIEGYQSHPHIKGEVSV 264 >gi|317493219|ref|ZP_07951642.1| thymidylate synthase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918879|gb|EFV40215.1| thymidylate synthase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLAEGTQKADRTGTGTVSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL + V+IWDEWAD++G+LGP+YG QWR+W DG IDQIS +++ L+ Sbjct: 61 WFLNGDTNTAYLRENNVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQISKVMEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP+++I + Sbjct: 181 YALLVHMMAQQLDLDVGDFVWTGGDTHLYSNHMEQTQLQLSREPRALPKLVIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264 >gi|90424757|ref|YP_533127.1| thymidylate synthase [Rhodopseudomonas palustris BisB18] gi|123394889|sp|Q211X8|TYSY_RHOPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|90106771|gb|ABD88808.1| thymidylate synthase [Rhodopseudomonas palustris BisB18] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 172/264 (65%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+QY DLL+ ++ G+++ DRTG GT S FG+QMRF L GFP+LTTK++ K++VHELL Sbjct: 1 MNQYHDLLQRILGEGAEKHDRTGTGTLSVFGHQMRFALDAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+ +V+ ++ Sbjct: 61 WFLKGDTNIKYLKDHGVSIWDEWADENGDLGPVYGSQWRSWPAADGRSIDQIADVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A ID+MALPPCHCLFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPAEIDQMALPPCHCLFQFYVARGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLKPGEFIHTLGDAHLYSNHLEQARLQLTRTPRDLPVMTINPQVTDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDFTL +Y+PH I A+V+V Sbjct: 241 GFRFEDFTLHNYDPHPHIKAEVAV 264 >gi|117921478|ref|YP_870670.1| thymidylate synthase [Shewanella sp. ANA-3] gi|166231734|sp|A0KZP5|TYSY_SHESA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|117613810|gb|ABK49264.1| thymidylate synthase [Shewanella sp. ANA-3] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL Sbjct: 1 MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + VSIWDEWAD++G+LGP+YG QWRSWP G+ IDQI+ ++ ++ Sbjct: 61 WFLKGDTNIAYLRENKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQIAQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR PR LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRQLPTMTILRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF L Y+PH I A V+V Sbjct: 241 DYQFEDFELTHYDPHPHIKAPVAV 264 >gi|255531326|ref|YP_003091698.1| thymidylate synthase [Pedobacter heparinus DSM 2366] gi|255344310|gb|ACU03636.1| thymidylate synthase [Pedobacter heparinus DSM 2366] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+ + DRTG GT S FGYQMRF+L +GFP++TTKK+H KS++HEL+ Sbjct: 1 MKQYLDLMQHVLDHGTQKHDRTGTGTISVFGYQMRFNLQEGFPMVTTKKLHLKSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G+LGP+YG QWRSWP G IDQI+ IV +++ Sbjct: 61 WFLSGDTNIKYLKDNGVKIWDEWADENGDLGPVYGSQWRSWPKPGGGHIDQIAQIVNTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVAEVENMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G YG+FIHTLGD HLYNNH EQ LQLSR PR LP M INP I D+ Sbjct: 181 YALLTMMVAQVCGLAYGDFIHTLGDAHLYNNHIEQTRLQLSREPRKLPVMEINPEIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF YEDFTL+ Y+PH I V+V Sbjct: 241 SFSYEDFTLKDYDPHPHIKGAVAV 264 >gi|307129791|ref|YP_003881807.1| thymidylate synthetase [Dickeya dadantii 3937] gi|306527320|gb|ADM97250.1| thymidylate synthetase [Dickeya dadantii 3937] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YLH + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ+ ++++ L+ Sbjct: 61 WFLNGDTNVGYLHDNKVTIWDEWADENGDLGPVYGKQWRAWGTADGRQIDQLQTVLKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYNNHLEQTHLQLSREPRPLPRLVIKRRPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH AI A V+V Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264 >gi|167764750|ref|ZP_02436871.1| hypothetical protein BACSTE_03140 [Bacteroides stercoris ATCC 43183] gi|167697419|gb|EDS13998.1| hypothetical protein BACSTE_03140 [Bacteroides stercoris ATCC 43183] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQLSR PR L QM INP++ ++ Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPRALSQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y PH I KV+V Sbjct: 241 DFKYEDFELVNYNPHPHIAGKVAV 264 >gi|332826869|gb|EGJ99669.1| thymidylate synthase [Dysgonomonas gadei ATCC BAA-286] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 157/264 (59%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+ V+ G+ + DRTG GT S FG+Q R++L+ GFP+LTTKK+H KS+++ELL Sbjct: 1 MKQYHDLLKRVLAEGTHKSDRTGTGTISVFGHQSRYNLADGFPVLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL HGV IW+EWAD++G+LG IYG QWRSWPDY+G IDQIS++V +++ Sbjct: 61 WFLAGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISNVVDTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA + M LPPCH FQFYV +GKLS QLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVADLPNMNLPPCHAFFQFYVADGKLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ +LQL+R R LP+MIINP + + Sbjct: 181 YALLLQMMAQVTGLEAGDFVHTLGDAHIYTNHLEQVNLQLTRDFRPLPRMIINPEVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF+L Y+PH I +V++ Sbjct: 241 DFKFEDFSLEGYDPHPHIKGEVAI 264 >gi|261822635|ref|YP_003260741.1| thymidylate synthase [Pectobacterium wasabiae WPP163] gi|261606648|gb|ACX89134.1| thymidylate synthase [Pectobacterium wasabiae WPP163] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V++ G+ + DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMNKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL+ + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ LR Sbjct: 61 WFLNGDTNVAYLNENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYNNHMEQTHLQLSREPRALPKLVIKRRPDTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|161761106|pdb|2VF0|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q Complexed With 5no2dump And Bw1843u89 gi|161761107|pdb|2VF0|B Chain B, Crystal Structure Of The Thymidylate Synthase K48q Complexed With 5no2dump And Bw1843u89 Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 200/263 (76%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TT++ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTQRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|317479583|ref|ZP_07938710.1| thymidylate synthase [Bacteroides sp. 4_1_36] gi|316904245|gb|EFV26072.1| thymidylate synthase [Bacteroides sp. 4_1_36] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGVEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWP+Y G IDQIS V++++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPNYKGGFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRDLPQMRINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y PH I KVSV Sbjct: 241 DFKFEDFELINYNPHPHIAGKVSV 264 >gi|126173426|ref|YP_001049575.1| thymidylate synthase [Shewanella baltica OS155] gi|166231730|sp|A3D1U3|TYSY_SHEB5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|125996631|gb|ABN60706.1| thymidylate synthase [Shewanella baltica OS155] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL Sbjct: 1 MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV+YL + VSIWDEWAD++G+LGP+YG QWRSWP G+ IDQIS ++ ++ Sbjct: 61 WFLKGETNVAYLRENKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR P LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRRPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L +Y PH I A V+V Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264 >gi|229544326|ref|ZP_04433385.1| thymidylate synthase [Bacillus coagulans 36D1] gi|229325465|gb|EEN91141.1| thymidylate synthase [Bacillus coagulans 36D1] Length = 265 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL R V++ G + DRTG GT S FG+QMRF L GFPLLTTKK+H KS+++ELL Sbjct: 2 MKQYLDLCREVLENGVKKDDRTGTGTISVFGHQMRFHLQDGFPLLTTKKLHLKSIIYELL 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L+GD+NV YL +GV IW+EWAD++G+LGP+YG QWRSW DG IDQI+ +++ ++ Sbjct: 62 WMLKGDTNVKYLQENGVRIWNEWADENGDLGPVYGQQWRSWQTRDGRTIDQITQVIEQIK 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNV ID+MALPPCHC FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 122 TNPDSRRLIVNAWNVGEIDRMALPPCHCFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 181 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ LQL R PR LP+M++NP + D+ Sbjct: 182 YALLTMMIAQVTGLEPGDFVHTLGDAHIYLNHIEQVKLQLEREPRKLPKMVLNPEVKDIF 241 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFRYEDFTL+ Y P+ I +VSV Sbjct: 242 SFRYEDFTLKDYNPYPHIPGRVSV 265 >gi|315646630|ref|ZP_07899747.1| thymidylate synthase [Paenibacillus vortex V453] gi|315277956|gb|EFU41277.1| thymidylate synthase [Paenibacillus vortex V453] Length = 264 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 150/264 (56%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+ ++ G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL Sbjct: 1 MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLMTTKRIHLKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N+ YL +GV IWDEWAD++G+LGP+YG QWR+W DG IDQI+++++S++ Sbjct: 61 WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGQHIDQIANVIESIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA I+ M LPPCH +FQFYV GKLSC L RS D FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVAEIENMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + GEFI + GDVH+Y+NH EQ QL R P LP++II + Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHMEQVKTQLEREPYELPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF Y+ H I A V+V Sbjct: 241 DYTFDDFEFEGYQYHPTIKATVAV 264 >gi|157834047|pdb|1TYS|A Chain A, Water-Mediated Substrate(Slash)product Discrimination: The Product Complex Of Thymidylate Synthase At 1.83 Angstroms Length = 265 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 2 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL P H FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 122 NDPDSRRIIVSAWNVGELDKMALAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 181 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 241 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 DYRFEDFEIEGYDPHPGIKAPVAI 265 >gi|288802399|ref|ZP_06407838.1| thymidylate synthase [Prevotella melaninogenica D18] gi|288334927|gb|EFC73363.1| thymidylate synthase [Prevotella melaninogenica D18] Length = 264 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL ++ G+ + DRT GT S FG+QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLNLLNRILTEGTQKGDRTRTGTLSIFGHQMRFDLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL HGV IW+EWAD++GELGP+YG QWRSWPDY G IDQI ++V+ ++ Sbjct: 61 WFLRGDTNVRYLQEHGVRIWNEWADENGELGPVYGHQWRSWPDYKGGTIDQIKNVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR +V+AWN A ++ MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HDPDSRRMLVTAWNPAEVEDMALPPCHCLFQFYVADGRLSLQLYQRSADSFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLLQMIAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+P I V+V Sbjct: 241 DFKYEDFELIGYDPLPHIPGVVAV 264 >gi|253687303|ref|YP_003016493.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259550794|sp|C6DAE9|TYSY_PECCP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|251753881|gb|ACT11957.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 264 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ LR Sbjct: 61 WFLNGDTNVAYLHENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTQLQLSREPRALPKLVIKRRPDTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEIEGYDPHPTIKAPVAI 264 >gi|5107510|pdb|1BQ1|A Chain A, E. Coli Thymidylate Synthase Mutant N177a In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|5107511|pdb|1BQ1|B Chain B, E. Coli Thymidylate Synthase Mutant N177a In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|157830434|pdb|1BQ2|A Chain A, E. Coli Thymidylate Synthase Mutant N177a Length = 264 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 199/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PF IASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFAIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|238751480|ref|ZP_04612972.1| Thymidylate synthase [Yersinia rohdei ATCC 43380] gi|238710347|gb|EEQ02573.1| Thymidylate synthase [Yersinia rohdei ATCC 43380] Length = 264 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S++VQ L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A +++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPIAI 264 >gi|150004500|ref|YP_001299244.1| thymidylate synthase [Bacteroides vulgatus ATCC 8482] gi|166231690|sp|A6L1Q8|TYSY_BACV8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|149932924|gb|ABR39622.1| putative thymidylate synthase B [Bacteroides vulgatus ATCC 8482] Length = 264 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 168/264 (63%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRILTEGVHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD +G+LG IYG QWRSWPDY+G IDQIS +++++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV NG+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+F+HTLGD H+Y NH EQ LQLSR PR LPQM INP+I D+ Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDF L +Y+P I KVSV Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264 >gi|160889228|ref|ZP_02070231.1| hypothetical protein BACUNI_01649 [Bacteroides uniformis ATCC 8492] gi|270295980|ref|ZP_06202180.1| thymidylate synthase [Bacteroides sp. D20] gi|156861235|gb|EDO54666.1| hypothetical protein BACUNI_01649 [Bacteroides uniformis ATCC 8492] gi|270273384|gb|EFA19246.1| thymidylate synthase [Bacteroides sp. D20] Length = 264 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGVEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWP+Y G IDQIS V++++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPNYKGGFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRDLPQMRINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y PH I KVSV Sbjct: 241 DFKFEDFELVNYNPHPHIAGKVSV 264 >gi|303237299|ref|ZP_07323869.1| thymidylate synthase [Prevotella disiens FB035-09AN] gi|302482686|gb|EFL45711.1| thymidylate synthase [Prevotella disiens FB035-09AN] Length = 264 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL +I G + DRTG GT S FG QMRF+L +GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRIITDGVQKGDRTGTGTLSVFGNQMRFNLQEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++GELGP+YG QWRSWP+Y G IDQIS +V ++ Sbjct: 61 WFLKGDTNVKYLQEHGVRIWNEWADENGELGPVYGHQWRSWPNYKGGTIDQISDVVDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A ++ MALPPCHCLFQFYV N KLS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPNSRRMLVTAWNPAEVEDMALPPCHCLFQFYVANDKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G + G+F++T GD HLY NH EQA LQL+R PR LP+M INPN+ + Sbjct: 181 YALLLQMMAQATGLEVGDFVYTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPNVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y PH I A+VSV Sbjct: 241 DFQYEDFELIDYNPHPHIAAEVSV 264 >gi|325954868|ref|YP_004238528.1| Thymidylate synthase [Weeksella virosa DSM 16922] gi|323437486|gb|ADX67950.1| Thymidylate synthase [Weeksella virosa DSM 16922] Length = 264 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL + V++ G+ + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH KS+++ELL Sbjct: 1 MKQYLDLCKKVMQEGTLKEDRTGTGTKSIFGYQMRFDLNEGFPLVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+SYL +GV IW+EWAD++GELGP+YG QWRSW +G IDQI ++ ++ Sbjct: 61 WFLKGETNISYLTENGVRIWNEWADENGELGPVYGKQWRSWAKPNGETIDQIKEVIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MAL PCH FQFYV + KLS QLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVGELDEMALAPCHAFFQFYVADDKLSLQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V + G+F+HT GD H+Y NHF+Q +LQLSR P LP+M INP++ D+ Sbjct: 181 YALLQMMVAQVCNLELGDFVHTFGDAHIYKNHFDQIELQLSRDPFPLPKMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++ DF L Y+ H I V+V Sbjct: 241 DFQFSDFELIDYQSHPHIKGIVAV 264 >gi|227327704|ref|ZP_03831728.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 264 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YLH + VSIWDEWAD++G LGP+YG QWRSW DG IDQ+ +++ LR Sbjct: 61 WFLNGDTNVAYLHENKVSIWDEWADENGNLGPVYGKQWRSWGAADGREIDQLKNVLTQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ +LQLSR PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTNLQLSREPRALPKLVIKRRPDTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|282879252|ref|ZP_06288002.1| thymidylate synthase [Prevotella buccalis ATCC 35310] gi|281298645|gb|EFA91064.1| thymidylate synthase [Prevotella buccalis ATCC 35310] Length = 264 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL +++ G + DRTG GT+S FG+QMRF+L GFP+LTTKK+H KS+++ELL Sbjct: 1 MQQYLDLLHRILEEGKVKTDRTGTGTKSIFGHQMRFNLEDGFPVLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGVSIW+EWAD++G+LGP+YG QWRSWPD+ G IDQI +++ ++ Sbjct: 61 WFLKGDTNVKYLQEHGVSIWNEWADENGDLGPVYGHQWRSWPDHRGGTIDQIQNVIDLIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +V+AWN A I +MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HHPDSRRMLVTAWNPADISEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHT GD HLY NH EQA LQL+R+PR LPQM +NP++ L Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTTGDTHLYLNHIEQAKLQLTRTPRELPQMKLNPDVKSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L +Y P I A+V+V Sbjct: 241 DFRYEDFELLNYNPWPHIKAEVAV 264 >gi|2392650|pdb|1ZPR|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) gi|2392651|pdb|1ZPR|B Chain B, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 264 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 200/263 (76%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++H+LLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHQLLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|328542989|ref|YP_004303098.1| dihydrofolate reductase-thymidylate synthase-like protein [polymorphum gilvum SL003B-26A1] gi|326412735|gb|ADZ69798.1| putative dihydrofolate reductase-thymidylate synthase, putative-like protein [Polymorphum gilvum SL003B-26A1] Length = 322 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 171/267 (64%), Positives = 209/267 (78%), Gaps = 4/267 (1%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL++ ++ G+DR DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H KS++HELLW Sbjct: 56 QQYLDLMQKILDEGTDRGDRTGTGTRSIFGHQMRFDLAAGFPLVTTKKLHLKSIIHELLW 115 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQ 117 FL GD+N+ YL+RHGV IWD+WAD+ GELGP+YG QWRSWP + G IDQI+++++ Sbjct: 116 FLAGDTNIGYLNRHGVKIWDDWADEHGELGPVYGAQWRSWPAPTPEDGGRTIDQIATVLR 175 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 +R P SRR IVSAWN AL+D MALPPCH LFQFYV G+LSCQLYQRS DVFLG+PFN Sbjct: 176 MIRETPESRRLIVSAWNPALVDAMALPPCHALFQFYVAEGRLSCQLYQRSADVFLGVPFN 235 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 IASY+LLTMM+A V G + G F+HT GD HLY NHF QA QL+R PR LP M +NP + Sbjct: 236 IASYALLTMMVAQVTGLKPGHFVHTFGDAHLYANHFAQAREQLTREPRPLPTMTLNPAVT 295 Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264 DL +F YEDFTL Y+PH I A ++V Sbjct: 296 DLFAFTYEDFTLSGYDPHPHIKAPIAV 322 >gi|332160563|ref|YP_004297140.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606963|emb|CBY28461.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664793|gb|ADZ41437.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 264 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S +VQ L+ Sbjct: 61 WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A +++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264 >gi|217974282|ref|YP_002359033.1| thymidylate synthase [Shewanella baltica OS223] gi|304409350|ref|ZP_07390970.1| thymidylate synthase [Shewanella baltica OS183] gi|307303708|ref|ZP_07583461.1| thymidylate synthase [Shewanella baltica BA175] gi|254790249|sp|B8EBR5|TYSY_SHEB2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|217499417|gb|ACK47610.1| Thymidylate synthase [Shewanella baltica OS223] gi|304351868|gb|EFM16266.1| thymidylate synthase [Shewanella baltica OS183] gi|306912606|gb|EFN43029.1| thymidylate synthase [Shewanella baltica BA175] Length = 264 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL Sbjct: 1 MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV+YL + VSIWDEWAD +G+LGP+YG QWRSWP G+ IDQIS ++ ++ Sbjct: 61 WFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR P LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L +Y PH I A V+V Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264 >gi|50119928|ref|YP_049095.1| thymidylate synthase [Pectobacterium atrosepticum SCRI1043] gi|62901301|sp|Q6D8I6|TYSY_ERWCT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|49610454|emb|CAG73899.1| thymidylate synthase [Pectobacterium atrosepticum SCRI1043] Length = 264 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL+ + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ LR Sbjct: 61 WFLNGDTNVAYLNENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHMEQTHLQLSREPRALPKLVIKRRPDTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|313575265|emb|CBI71203.1| hypothetical protein [uncultured bacterium] Length = 264 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 180/264 (68%), Positives = 220/264 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV++ G+DR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLRHVMETGTDRGDRTGKGTRSIFGYQMRFDLAEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YL +GVSIWDEWAD+ GELGP+YG QWRSWP DG IDQIS +++ L+ Sbjct: 61 WFLKGDTNVAYLTENGVSIWDEWADEKGELGPVYGYQWRSWPAPDGRHIDQISQLIEGLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNV +D+MALP CHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 VNPNSRRHIVSAWNVGQLDEMALPACHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y++HFEQA LQL+R+P+ LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDTHIYSDHFEQAKLQLTRTPKALPTMRINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFR+EDF L YE I A V+V Sbjct: 241 SFRFEDFALEGYEADPHIKAAVAV 264 >gi|217970012|ref|YP_002355246.1| thymidylate synthase [Thauera sp. MZ1T] gi|217507339|gb|ACK54350.1| thymidylate synthase [Thauera sp. MZ1T] Length = 264 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV++ G + DRTG GT S FG+QMRF L GFPLLTTKK+H +S++HELL Sbjct: 1 MRQYLDLMRHVLEHGDPKTDRTGTGTLSVFGWQMRFRLQDGFPLLTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD DGELGP+YG QWR W DG +DQI+ +V+S+R Sbjct: 61 WFLQGDTNIRYLRENGVSIWDEWADADGELGPVYGKQWRRWETADGRSVDQIARVVESIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRRH+VSAWN +D MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RTPDSRRHLVSAWNPGEVDAMALPPCHALFQFYVAGGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + G+F+ T GD HLY+NH QA QL R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQVCELEAGDFVWTGGDCHLYSNHLRQAREQLERAPRPLPTLRLNPAVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED L Y+PH I A V+V Sbjct: 241 GFRFEDIALEGYDPHPHIKAPVAV 264 >gi|309781084|ref|ZP_07675822.1| thymidylate synthase [Ralstonia sp. 5_7_47FAA] gi|308920150|gb|EFP65809.1| thymidylate synthase [Ralstonia sp. 5_7_47FAA] Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L GFPL+TTKKVH KS+V+ELL Sbjct: 1 MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGP+YG QWRSWP +G IDQI+ ++ ++ Sbjct: 61 WFLQGATNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G G+F+ T GD HLYNNHFEQ QL+R P LP++ I + Sbjct: 181 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVQTQLAREPLPLPKLHIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H AI A V+V Sbjct: 241 DYQYEDFEIVGYQSHPAIKAPVAV 264 >gi|294673977|ref|YP_003574593.1| thymidylate synthase [Prevotella ruminicola 23] gi|294472139|gb|ADE81528.1| thymidylate synthase [Prevotella ruminicola 23] Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD+L ++ G+ + DRTG GT S FG Q R++L GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDILNRILTEGTQKGDRTGTGTISIFGTQSRYNLDDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++GELGP+YG QWRSWPDY+G IDQI ++ L+ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADENGELGPVYGHQWRSWPDYNGGTIDQIQYVLDQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++KMALPPCH +FQFYV + +LS QLYQRS D FLG+PFNIAS Sbjct: 121 NNPNSRRMIVSAWNVAEVNKMALPPCHTIFQFYVADDRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V GF+ G+FIHT GD HLY NH EQA LQL+R PR LP+MIINP++ +L Sbjct: 181 YALLLQMMAQVTGFKAGDFIHTTGDTHLYLNHIEQAKLQLTREPRPLPKMIINPDVKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF L Y+PH I A+VSV Sbjct: 241 DFTFEDFQLEGYDPHPHIKAEVSV 264 >gi|294778259|ref|ZP_06743685.1| thymidylate synthase [Bacteroides vulgatus PC510] gi|294447887|gb|EFG16461.1| thymidylate synthase [Bacteroides vulgatus PC510] Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRILTEGVHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD +G+LG IYG QWRSWPDY+G IDQIS +++++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV NG+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+F+HTLGD H+Y NH EQ LQLSR PR LPQM INP+I ++ Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDF L +Y+P I KVSV Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264 >gi|253988063|ref|YP_003039419.1| thymidylate synthase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779513|emb|CAQ82674.1| thymidylate synthase [Photorhabdus asymbiotica] Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 151/264 (57%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKRVLEEGTSKADRTGTGTISIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YLH + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ+ ++++ L+ Sbjct: 61 WFLNGDTNIQYLHDNSVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLKTVLEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR+LP+++I L Sbjct: 181 YALLVHMIAQQCDLEVGDFVWTGGDTHLYSNHMEQTQLQLSREPRSLPKLMIKRKPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH I A V++ Sbjct: 241 DYKFDDFEIVDYDPHPGIKAPVAI 264 >gi|227115444|ref|ZP_03829100.1| thymidylate synthase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YLH + VSIWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ LR Sbjct: 61 WFLNGDTNVVYLHENKVSIWDEWADENGDLGPVYGKQWRSWGAADGREIDQLKNVLTQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ +LQLSR PR LP+++I L Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTNLQLSREPRALPKLVIKRRPDTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264 >gi|172044615|sp|Q0K889|TYSY_RALEH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLRAGFPVVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L HGV+IWDEWAD++GELGP+YG QWRSWP DG IDQI+ +V +R Sbjct: 61 WFLQGSTNVRWLQEHGVTIWDEWADENGELGPVYGSQWRSWPTPDGRHIDQITDLVAQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWNVA I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + G+F+ T GD HLYNNHFEQ QL+R P LPQ+ I + Sbjct: 181 YALLTHMMAQQTGLEVGDFVWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF L Y+ HAAI A V+V Sbjct: 241 DYRYEDFELAGYQSHAAIKAPVAV 264 >gi|256823628|ref|YP_003147591.1| thymidylate synthase [Kangiella koreensis DSM 16069] gi|256797167|gb|ACV27823.1| thymidylate synthase [Kangiella koreensis DSM 16069] Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++RHVI G D+ DRTG GTRS FGYQMRF+L GFPL+TTKK+H +S+++ELL Sbjct: 1 MKQYLDMMRHVINNGEDKGDRTGTGTRSVFGYQMRFNLQDGFPLVTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWD+WAD++G+LGP+YG QWRSW DG IDQISS++ ++ Sbjct: 61 WFLNGDTNIKYLKDNGVSIWDDWADENGDLGPVYGEQWRSWKKPDGTTIDQISSVLNQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V A+N + D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRLMVVAYNPGVADEMALPPCHSLFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + GEFI T GD HLY+NHFEQA+ QLSR P +LP + I L Sbjct: 181 YALLTHMIAQQAGLEVGEFIWTGGDTHLYSNHFEQANEQLSREPLSLPALKIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + YE H I A V+V Sbjct: 241 DYQFEDFEIVGYESHPHIKAPVAV 264 >gi|281602182|gb|ADA75166.1| Thymidylate synthase [Shigella flexneri 2002017] Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 151/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S F +QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFVHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH + A V++ Sbjct: 241 DYRFEDFEIEGYDPHPGVKAPVAI 264 >gi|251790775|ref|YP_003005496.1| thymidylate synthase [Dickeya zeae Ech1591] gi|247539396|gb|ACT08017.1| thymidylate synthase [Dickeya zeae Ech1591] Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL+ + VSIWDEWAD++G LGP+YG QWR+W DG IDQ+ +++ L+ Sbjct: 61 WFLNGDTNIGYLNDNKVSIWDEWADENGSLGPVYGKQWRAWGAADGRQIDQLQTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYNNHLEQTRLQLSREPRPLPRLVIKRRPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V+V Sbjct: 241 DYRFEDFDIEGYDPHPAIKAPVAV 264 >gi|293375484|ref|ZP_06621763.1| thymidylate synthase [Turicibacter sanguinis PC909] gi|325844947|ref|ZP_08168312.1| thymidylate synthase [Turicibacter sp. HGF1] gi|292645884|gb|EFF63915.1| thymidylate synthase [Turicibacter sanguinis PC909] gi|325488997|gb|EGC91386.1| thymidylate synthase [Turicibacter sp. HGF1] Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ G+ + DRTG GT STFGYQMRFDL++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLDLLNHVLENGTTKGDRTGTGTISTFGYQMRFDLAEGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ GD+NV YL +GV IW+EWAD++G LGP+YG QWR W +G VIDQ++ +V+ ++ Sbjct: 61 WFISGDTNVKYLQENGVRIWNEWADEEGNLGPVYGKQWRRWEGANGTVIDQLAEVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNV +D+MALPPCH LFQFYV++GKLSC LYQRS D+FLG+PFNIAS Sbjct: 121 TNPNSRRLIVNAWNVGELDQMALPPCHLLFQFYVNDGKLSCMLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HTLGD H+Y NH EQ +QL R R LP M +N ++ + Sbjct: 181 YALLTMMIAQVTGLEVGEFVHTLGDAHIYQNHLEQVKIQLGRDIRPLPTMKLNQDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDFTL Y+PH + V+V Sbjct: 241 DFKYEDFTLEGYDPHPLLKGVVAV 264 >gi|145297746|ref|YP_001140587.1| thymidylate synthase [Aeromonas salmonicida subsp. salmonicida A449] gi|166231686|sp|A4SIW7|TYSY_AERS4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|142850518|gb|ABO88839.1| thymidylate synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 264 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 158/264 (59%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL Sbjct: 1 MRVYLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL GVSIWDEWAD++G+LGP+YG QWRSWP DG VIDQI V ++ Sbjct: 61 WFLNGDTNTAYLKEQGVSIWDEWADENGDLGPVYGAQWRSWPAADGAVIDQIQRAVDDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+F+ T GDVHLY+NH EQ LQLSR PR LPQ+ I + Sbjct: 181 YALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLSREPRPLPQLAIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 241 DYRFEDFEILGYDPHPGIKAPVAI 264 >gi|254503707|ref|ZP_05115858.1| thymidylate synthase [Labrenzia alexandrii DFL-11] gi|222439778|gb|EEE46457.1| thymidylate synthase [Labrenzia alexandrii DFL-11] Length = 268 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 173/268 (64%), Positives = 216/268 (80%), Gaps = 4/268 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL +++ G DR DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYHDLLSKILEDGIDRGDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIV 116 WF+ GD+N++YL HGV IWD+WAD++G+LGP+YG QWRSWP D G IDQIS+++ Sbjct: 61 WFVAGDTNIAYLKEHGVKIWDDWADENGDLGPVYGYQWRSWPAPYRDGSGQSIDQISNVL 120 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 + +R P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PF Sbjct: 121 EMIRKSPESRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADVFLGVPF 180 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 NIASY+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA QL+R+PR LP+M INP + Sbjct: 181 NIASYALLTMMIAQVTGLKPGDFVHTLGDAHLYSNHFDQAREQLTRAPRALPEMKINPAV 240 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 DL +F YEDF L Y+PH I A ++V Sbjct: 241 TDLFAFTYEDFELTGYDPHPHIAAPIAV 268 >gi|329921994|ref|ZP_08277801.1| thymidylate synthase [Paenibacillus sp. HGF5] gi|328942454|gb|EGG38717.1| thymidylate synthase [Paenibacillus sp. HGF5] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 150/264 (56%), Positives = 192/264 (72%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+ ++ G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL Sbjct: 1 MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLVTTKRIHLKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N+ YL +GV IWDEWAD++G+LGP+YG QWR+W DG IDQI+ ++ S++ Sbjct: 61 WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGRHIDQIAGVIDSIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA ID M LPPCH +FQFYV GKLSC L RS D FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVAEIDNMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GEFI + GDVH+Y+NH EQ QL R P LP+++I + Sbjct: 181 YALLTHMVAQQCDLEPGEFIWSGGDVHIYSNHMEQVRTQLEREPYALPKLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF Y+ H I A V+V Sbjct: 241 DYTFEDFEFEGYQYHPTIKATVAV 264 >gi|212693595|ref|ZP_03301723.1| hypothetical protein BACDOR_03112 [Bacteroides dorei DSM 17855] gi|237708754|ref|ZP_04539235.1| thymidylate synthase [Bacteroides sp. 9_1_42FAA] gi|237724195|ref|ZP_04554676.1| thymidylate synthase [Bacteroides sp. D4] gi|265755979|ref|ZP_06090446.1| thymidylate synthase [Bacteroides sp. 3_1_33FAA] gi|212663848|gb|EEB24422.1| hypothetical protein BACDOR_03112 [Bacteroides dorei DSM 17855] gi|229437383|gb|EEO47460.1| thymidylate synthase [Bacteroides dorei 5_1_36/D4] gi|229457180|gb|EEO62901.1| thymidylate synthase [Bacteroides sp. 9_1_42FAA] gi|263234057|gb|EEZ19658.1| thymidylate synthase [Bacteroides sp. 3_1_33FAA] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRILTEGVHKEDRTGTGTISIFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD +G+LG IYG QWRSWPDY+G IDQIS +++++ Sbjct: 61 WFLQGDTNIKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV NG+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+F+HTLGD H+Y NH EQ LQLSR PR LPQM INP+I D+ Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDF L +Y+P I KVSV Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264 >gi|148747783|ref|YP_001285862.1| putative thymidylate synthase [Geobacillus virus E2] gi|113715725|gb|ABI36874.1| putative thymidylate synthase [Geobacillus virus E2] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ +++ G ++ DRTGVGT S FG Q+RF+L GFPL+TTKK+H +S+++ELL Sbjct: 1 MKQYLDLLQDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGPIYG QWRSW DG IDQI+ +V+ ++ Sbjct: 61 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTIDQIAWVVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P+SRR +VSAWNVA +D+M LPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 121 RNPHSRRLLVSAWNVAELDEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A GE I T GDVHLY NH EQA LQL+R PR LP++++ + Sbjct: 181 YALLTHMVAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVLKRKPPSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF + Y+PH AI A V+V Sbjct: 241 DYEYDDFEIVGYDPHPAIKAPVAV 264 >gi|152999765|ref|YP_001365446.1| thymidylate synthase [Shewanella baltica OS185] gi|160874384|ref|YP_001553700.1| thymidylate synthase [Shewanella baltica OS195] gi|166231731|sp|A6WKP4|TYSY_SHEB8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036943|sp|A9L5M3|TYSY_SHEB9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|151364383|gb|ABS07383.1| Thymidylate synthase [Shewanella baltica OS185] gi|160859906|gb|ABX48440.1| Thymidylate synthase [Shewanella baltica OS195] gi|315266619|gb|ADT93472.1| thymidylate synthase [Shewanella baltica OS678] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H++ G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL Sbjct: 1 MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV+YL + VSIWDEWAD +G+LGP+YG QWRSWP G+ IDQIS ++ ++ Sbjct: 61 WFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR P LP M I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRRPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L +Y PH I A V+V Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264 >gi|238758887|ref|ZP_04620059.1| Thymidylate synthase [Yersinia aldovae ATCC 35236] gi|238702844|gb|EEP95389.1| Thymidylate synthase [Yersinia aldovae ATCC 35236] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G LGP+YG QWR+W DG IDQ+S++V+ L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGSLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A +++ Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPIAI 264 >gi|326330104|ref|ZP_08196416.1| thymidylate synthase [Nocardioidaceae bacterium Broad-1] gi|325952114|gb|EGD44142.1| thymidylate synthase [Nocardioidaceae bacterium Broad-1] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL ++ G ++ DRTG GT S FG+Q R+DL++GFPLLTTKK+H +SV ELL Sbjct: 1 MQSYLDLLTRILDEGVEKSDRTGTGTISVFGHQTRYDLAEGFPLLTTKKIHTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L G++IWDEWAD++G+LGP+YG QWRSWP DG +DQI+ I+ ++ Sbjct: 61 WFLRGDTNVRWLQERGITIWDEWADENGDLGPVYGYQWRSWPTPDGRHVDQIARIIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRRHIV+AWN A ID MALPPCH L QFYV +GKLS QLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRHIVTAWNPADIDDMALPPCHTLCQFYVADGKLSLQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G Q GEF+HTLGD HLY+NH EQA LQL+R+PR LP + +NP++ D+ Sbjct: 181 YALLTHMVAHVTGLQPGEFVHTLGDAHLYSNHVEQARLQLTRTPRPLPTLRLNPDVKDID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D T+ Y+P I A V+V Sbjct: 241 AFDLDDITVEGYDPAPGIKAPVAV 264 >gi|330998283|ref|ZP_08322108.1| thymidylate synthase [Paraprevotella xylaniphila YIT 11841] gi|329568672|gb|EGG50473.1| thymidylate synthase [Paraprevotella xylaniphila YIT 11841] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL +++ G ++ DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYLDLLHRIMEEGVEKSDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG IYG QWRSWPDY G IDQI V ++R Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQIQEAVDTIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV + M LPPCH FQFYV GKLS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLGNMNLPPCHAFFQFYVAKGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V G + G+F+HTLGD H+Y NH EQ LQL+R PR LP+M +NP++ + Sbjct: 181 YALLLMMMAQVTGLKAGDFVHTLGDTHIYKNHLEQVKLQLTREPRPLPRMRLNPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +Y P I VSV Sbjct: 241 DFKFEDFTLENYNPWPHIAGAVSV 264 >gi|220928734|ref|YP_002505643.1| thymidylate synthase [Clostridium cellulolyticum H10] gi|254790234|sp|B8I0T8|TYSY_CLOCE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219999062|gb|ACL75663.1| thymidylate synthase [Clostridium cellulolyticum H10] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL +H++ G + DRTG GT STFGYQMRFDL KGFPLLTTKK+H KS++HELL Sbjct: 1 MQQYLDLCKHILNNGIKKEDRTGTGTISTFGYQMRFDLQKGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ G++N+ YL +GVSIWDEWAD++G LGP+YG QWRSW DG IDQ+ ++ ++ Sbjct: 61 WFISGNTNIKYLKDNGVSIWDEWADENGNLGPVYGHQWRSWDTADGRSIDQLKGVIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVS+WNV I+KMALPPCHC +QFYV NG LSC LYQRS DVF+G+PFNIAS Sbjct: 121 NNPDSRRLIVSSWNVGEIEKMALPPCHCFYQFYVVNGTLSCMLYQRSADVFIGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+L TMM+A G + GEF+HTLGD H+Y NH EQ LQLSR PR LP+M INP+I DL Sbjct: 181 YALFTMMIAQSCGLRAGEFVHTLGDAHIYLNHVEQVKLQLSRDPRPLPKMNINPDIKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+Y DFTL Y+PH I V+V Sbjct: 241 QFKYSDFTLTDYDPHPHIKGAVAV 264 >gi|94311504|ref|YP_584714.1| thymidylate synthase [Cupriavidus metallidurans CH34] gi|122987875|sp|Q1LK81|TYSY_RALME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|93355356|gb|ABF09445.1| thymidylate synthetase [Cupriavidus metallidurans CH34] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDL++GFP++TTKK+H KS++HELL Sbjct: 1 MKQYLDFMRHVYEHGTEKSDRTGTGTRSVFGYQMRFDLNEGFPVVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N+ YL +GV+IWDEWAD +GELGPIYG QWR+WP DG IDQI+ +VQ +R Sbjct: 61 WFLQGSTNIKYLKDNGVTIWDEWADANGELGPIYGYQWRAWPTPDGRHIDQITEVVQQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 DNPDSRRLIVSAWNVGEIPQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G+F+ T GD H+Y+NHFEQ + QLSR P LP + I + Sbjct: 181 YALLTHMIAQQCDLGVGDFVWTGGDCHIYSNHFEQVETQLSREPMKLPTLRIKHRPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++Y+DF L YE H AI A V+V Sbjct: 241 DYKYDDFELVGYESHPAIKAPVAV 264 >gi|88858168|ref|ZP_01132810.1| thymidylate synthase [Pseudoalteromonas tunicata D2] gi|88819785|gb|EAR29598.1| thymidylate synthase [Pseudoalteromonas tunicata D2] Length = 277 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 161/277 (58%), Positives = 203/277 (73%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+RHV + G + DRTG GT S FGYQMRF+LS+GFPL+TTKK H KS++HELL Sbjct: 1 MKQYLELMRHVKEHGVKKEDRTGTGTISVFGYQMRFNLSEGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWD WA ++GELGP+YG QWRSW DG VIDQI+ +++ ++ Sbjct: 61 WFLAGDTNIKYLTDNGVKIWDGWATEEGELGPVYGAQWRSWQGLDGQVIDQIAELIKQIK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN A++ K ALPPCH LFQFYV GKLSCQLYQRS Sbjct: 121 TNPDSRRLIVSAWNPAVLPDTQFSPSENAAMGKQALPPCHTLFQFYVLEGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ LG+PFNIASY+LLTMM+A V + G+F+HT GD HLY+NH EQ D QLSR+P Sbjct: 181 ADILLGVPFNIASYALLTMMIAQVCDLKVGDFVHTFGDAHLYSNHLEQVDEQLSRTPFPK 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP + D+ +F++EDF L +Y+ H I A V++ Sbjct: 241 PTMKINPAVKDIFAFKFEDFELENYQAHPHIKAPVAI 277 >gi|226946823|ref|YP_002801896.1| thymidylate synthase [Azotobacter vinelandii DJ] gi|259550764|sp|C1DK16|TYSY_AZOVD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226721750|gb|ACO80921.1| Thymidylate synthase protein [Azotobacter vinelandii DJ] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V + G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK H KS+VHELL Sbjct: 1 MKQYLDLMRLVREHGTFKSDRTGTGTFSVFGHQMRFDLAEGFPLVTTKKCHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD +G+LGP+YG QWRSWP DG IDQI+++V +R Sbjct: 61 WFLKGDTNIRYLKENGVSIWDEWADGNGDLGPVYGYQWRSWPAPDGRHIDQIANVVNMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+M LPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 DNPDSRRLIVSAWNPALIDEMKLPPCHALFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL +M+A V G GEF+ T GD HLY NH EQADLQLSR P LP M ++P++ DL Sbjct: 181 YALLILMMAQVTGLAPGEFVWTGGDCHLYANHLEQADLQLSREPLPLPTMQLDPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L Y+ H I A V++ Sbjct: 241 AFRFEDFELVGYQSHPHIKAPVAI 264 >gi|254882766|ref|ZP_05255476.1| thymidylate synthase [Bacteroides sp. 4_3_47FAA] gi|319643926|ref|ZP_07998501.1| thymidylate synthase [Bacteroides sp. 3_1_40A] gi|254835559|gb|EET15868.1| thymidylate synthase [Bacteroides sp. 4_3_47FAA] gi|317384450|gb|EFV65417.1| thymidylate synthase [Bacteroides sp. 3_1_40A] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 168/264 (63%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRILTEGIHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD +G+LG IYG QWRSWPDY+G IDQIS +++++ Sbjct: 61 WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ M LPPCH FQFYV NG+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+F+HTLGD H+Y NH EQ LQLSR PR LPQM INP+I D+ Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDF L +Y+P I KVSV Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264 >gi|254468912|ref|ZP_05082318.1| thymidylate synthase [beta proteobacterium KB13] gi|207087722|gb|EDZ65005.1| thymidylate synthase [beta proteobacterium KB13] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ G + DRTG GT S FGYQ+RFDLS+ FPLLTTKK+H KSV+HELL Sbjct: 1 MRQYLDLLNHVLEHGDKKEDRTGTGTISVFGYQIRFDLSEKFPLLTTKKIHLKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N+ YL +GVSIWDEWAD+ G+LGP+YG QWRSW DG IDQIS+++++++ Sbjct: 61 WFLKGSTNIGYLKENGVSIWDEWADEHGDLGPVYGSQWRSWQTSDGRTIDQISNLIENIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +DKM LPPCHC FQFYV N KLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGDVDKMKLPPCHCFFQFYVANDKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V GEF+HTLGD H+Y+NH EQ QLSR + LP M INP++ D+ Sbjct: 181 YALLTLMIAQVTNLAPGEFVHTLGDAHIYSNHIEQVKQQLSREAKDLPIMKINPHVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+Y+DF + +Y+PH I A V+V Sbjct: 241 SFKYDDFEILNYDPHPLIKAPVAV 264 >gi|149179666|ref|ZP_01858171.1| thymidylate synthase [Bacillus sp. SG-1] gi|148851858|gb|EDL66003.1| thymidylate synthase [Bacillus sp. SG-1] Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L +HV++ G+++ DRTG GT STFGYQMRFDLS+GFP+LTTKK+H KS++HELL Sbjct: 1 MKQYLELCKHVLENGTEKGDRTGTGTISTFGYQMRFDLSEGFPMLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW++WAD+ G+LGP+YG QWRSW G IDQIS ++++++ Sbjct: 61 WFLNGDTNVKYLQDNGVRIWNDWADETGDLGPVYGKQWRSWEGAGGETIDQISELIENIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRLIVNAWNVGEIDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A+V + GEF+HT GDVH+Y NH EQ LQL+R PR+LP + IN ++ D+ Sbjct: 181 YALLTMMIANVCDLEPGEFVHTFGDVHIYQNHMEQVKLQLTREPRSLPSIRINKDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 S+ +EDFTL Y+PH I VSV Sbjct: 241 SYSFEDFTLEDYDPHPHIKGVVSV 264 >gi|2624566|pdb|1AIQ|A Chain A, Crystal Structure Of Thymidylate Synthase R126e Mutant gi|2624567|pdb|1AIQ|B Chain B, Crystal Structure Of Thymidylate Synthase R126e Mutant gi|157829911|pdb|1AJM|A Chain A, Crystal Structure Of Thymidylate Synthase R126e Mutant Length = 264 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 199/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP S R IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSERIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|123443517|ref|YP_001007490.1| thymidylate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166231744|sp|A1JPC9|TYSY_YERE8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|122090478|emb|CAL13346.1| thymidylate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 264 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S +VQ L+ Sbjct: 61 WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKSKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A +++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264 >gi|113868661|ref|YP_727150.1| thymidylate synthase [Ralstonia eutropha H16] gi|113527437|emb|CAJ93782.1| thymidylate synthase [Ralstonia eutropha H16] Length = 282 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL GFP++TTKK+H KS+++ELL Sbjct: 19 MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLRAGFPVVTTKKLHLKSIIYELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L HGV+IWDEWAD++GELGP+YG QWRSWP DG IDQI+ +V +R Sbjct: 79 WFLQGSTNVRWLQEHGVTIWDEWADENGELGPVYGSQWRSWPTPDGRHIDQITDLVAQIR 138 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWNVA I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 139 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 198 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + G+F+ T GD HLYNNHFEQ QL+R P LPQ+ I + Sbjct: 199 YALLTHMMAQQTGLEVGDFVWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRKPDSIF 258 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF L Y+ HAAI A V+V Sbjct: 259 DYRYEDFELAGYQSHAAIKAPVAV 282 >gi|83745787|ref|ZP_00942844.1| Thymidylate synthase [Ralstonia solanacearum UW551] gi|83727477|gb|EAP74598.1| Thymidylate synthase [Ralstonia solanacearum UW551] Length = 334 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 71 MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 130 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 131 WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 190 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 191 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 250 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G+F+ T GD HLYNNHFEQ + QL+R+P LP++ I + Sbjct: 251 YALLTHMIAQQTSLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIF 310 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+ HAAI A V+V Sbjct: 311 DYQFEDFEIVGYQSHAAIKAPVAV 334 >gi|53715018|ref|YP_101010.1| thymidylate synthase [Bacteroides fragilis YCH46] gi|62901263|sp|Q64PV5|TYSY_BACFR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|52217883|dbj|BAD50476.1| thymidylate synthase [Bacteroides fragilis YCH46] Length = 264 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD+ G+LG IYG QWRSWP YDG IDQIS V +++ Sbjct: 61 WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYDGGFIDQISEAVDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ ++ Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++DF L +Y+PH I KV+V Sbjct: 241 DFQFKDFELVNYDPHPHIAGKVAV 264 >gi|261416896|ref|YP_003250579.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373352|gb|ACX76097.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327357|gb|ADL26558.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 270 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 175/270 (64%), Positives = 217/270 (80%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ +I G DR DRTG GTRS FG Q RFDLSKGFP LTTKK+H +S++HELL Sbjct: 1 MQQYLDLLKDIIDNGVDRSDRTGTGTRSVFGRQTRFDLSKGFPCLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH + V+IWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ SL+ Sbjct: 61 WFLKGDTNIKYLHDNKVTIWDEWADENGDLGPVYGHQWRSWPTPDGGHIDQIANLINSLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGI 174 +P SRRH+V AWNVA +DKMALPPCHCLFQFYV KLSCQLYQRS D+FLG+ Sbjct: 121 NNPDSRRHLVCAWNVAEVDKMALPPCHCLFQFYVGGVGASGKRKLSCQLYQRSADMFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASYSLLTMMLA V G++ GEF+HT GD+HLY+NHF+QA QLSR+PR LP M +NP Sbjct: 181 PFNIASYSLLTMMLAQVCGYEAGEFVHTFGDLHLYSNHFDQAREQLSRTPRALPTMKMNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ DL +F++EDF L +Y+P I A ++V Sbjct: 241 DVKDLFNFKFEDFELVNYDPWPTIKAPIAV 270 >gi|21730590|pdb|1KZJ|A Chain A, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX gi|21730591|pdb|1KZJ|B Chain B, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX gi|21730592|pdb|1KZJ|C Chain C, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX gi|21730593|pdb|1KZJ|D Chain D, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX gi|21730594|pdb|1KZJ|E Chain E, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX gi|21730595|pdb|1KZJ|F Chain F, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX Length = 264 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 199/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+I DEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIGDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|300724836|ref|YP_003714161.1| thymidylate synthetase [Xenorhabdus nematophila ATCC 19061] gi|62901326|sp|Q6REU8|TYSY_XENNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|46102543|gb|AAS80323.1| thymidylate synthetase [Xenorhabdus nematophila] gi|297631378|emb|CBJ92073.1| thymidylate synthetase [Xenorhabdus nematophila ATCC 19061] Length = 264 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTAKDDRTGTGTRSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YLH +GVSIWDEWAD++G+LGP+YG QWR+W DG IDQ++ +++ L+ Sbjct: 61 WFLNGDTNIKYLHDNGVSIWDEWADENGDLGPVYGKQWRAWGSADGRHIDQLTQVLEQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 GDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLYNNH EQ LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCNLDVGDFVWTGGDTHLYNNHLEQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+P+ I A V++ Sbjct: 241 DYRFEDFEIVDYDPYPGIKAPVAI 264 >gi|261406249|ref|YP_003242490.1| thymidylate synthase [Paenibacillus sp. Y412MC10] gi|261282712|gb|ACX64683.1| thymidylate synthase [Paenibacillus sp. Y412MC10] Length = 264 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 150/264 (56%), Positives = 192/264 (72%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+ ++ G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL Sbjct: 1 MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLMTTKRIHLKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N+ YL +GV IWDEWAD++G+LGP+YG QWR+W DG IDQI+ ++ S++ Sbjct: 61 WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGRHIDQIAGVIDSIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA ID M LPPCH +FQFYV GKLSC L RS D FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVAEIDNMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GEFI + GDVH+Y+NH EQ QL R P LP+++I + Sbjct: 181 YALLTHMVAQQCDLEPGEFIWSGGDVHIYSNHMEQVRTQLEREPYALPKLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF Y+ H I A V+V Sbjct: 241 DYTFEDFEFEGYQYHPTIKATVAV 264 >gi|20150422|pdb|1JG0|A Chain A, Crystal Structure Of Escherichia Coli Thymidylate Synthase Complexed With 2'-Deoxyuridine-5'-Monophosphate And N,O- Didansyl-L-Tyrosine gi|20150423|pdb|1JG0|B Chain B, Crystal Structure Of Escherichia Coli Thymidylate Synthase Complexed With 2'-Deoxyuridine-5'-Monophosphate And N,O- Didansyl-L-Tyrosine Length = 264 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 199/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + D TG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDATGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGAHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|93279927|pdb|2G8M|A Chain A, Escherichia Coli Thymidylate Synthase Y209w In Complex With Substrate, Dump, And A Cofactor Analog, Cb3717 gi|93279928|pdb|2G8M|B Chain B, Escherichia Coli Thymidylate Synthase Y209w In Complex With Substrate, Dump, And A Cofactor Analog, Cb3717 gi|93279931|pdb|2G8X|A Chain A, Escherichia Coli Y209w Apoprotein gi|93279932|pdb|2G8X|B Chain B, Escherichia Coli Y209w Apoprotein Length = 264 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 200/263 (76%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HL++NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLWSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|238787265|ref|ZP_04631064.1| Thymidylate synthase [Yersinia frederiksenii ATCC 33641] gi|238724527|gb|EEQ16168.1| Thymidylate synthase [Yersinia frederiksenii ATCC 33641] Length = 264 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLAEGTAKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S++VQ L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVAEGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLIHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTQLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A +++ Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264 >gi|269138061|ref|YP_003294761.1| thymidylate synthase [Edwardsiella tarda EIB202] gi|267983721|gb|ACY83550.1| thymidylate synthase [Edwardsiella tarda EIB202] gi|304558105|gb|ADM40769.1| Thymidylate synthase [Edwardsiella tarda FL6-60] Length = 264 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMRKVLAEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++NV YLH + V+IWDEWAD++G+LGP+YG QWR+W DG +DQI +++ LR Sbjct: 61 WFLNGETNVKYLHENNVTIWDEWADENGDLGPVYGKQWRAWGCADGRQVDQIRQVMEQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + Q G+F+ T GD HLY+NH EQ LQL+R PR LP++++ + Sbjct: 181 YALLVHMMAQQLDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRALPRLVLARRPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V+V Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAV 264 >gi|153009122|ref|YP_001370337.1| thymidylate synthase [Ochrobactrum anthropi ATCC 49188] gi|166231721|sp|A6WZV4|TYSY_OCHA4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|151561010|gb|ABS14508.1| Thymidylate synthase [Ochrobactrum anthropi ATCC 49188] Length = 264 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G+DR DRTG GTRS FGYQMRF+L +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDNGTDRGDRTGTGTRSVFGYQMRFNLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GVSIWDEWADK+G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 61 WFLKGDTNIAYLKENGVSIWDEWADKNGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 GNPNSRRLIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y NHF+QA LQL+R P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVAGLKPGEFIHTLGDAHIYANHFDQARLQLTRIPKKLPTMWINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFQLEGYEADPTIKAPIAV 264 >gi|154491774|ref|ZP_02031400.1| hypothetical protein PARMER_01390 [Parabacteroides merdae ATCC 43184] gi|154088015|gb|EDN87060.1| hypothetical protein PARMER_01390 [Parabacteroides merdae ATCC 43184] Length = 264 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V++ G + DRTG GT S FG+QMRF+L GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLELLDRVLREGVKKEDRTGTGTYSVFGHQMRFNLEDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N YL HGV IW+EWAD DG LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLQGDTNAKYLQEHGVRIWNEWADPDGNLGHIYGFQWRSWPDYKGGNIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D M LPPCH FQFYV NG+LS Q+YQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQMYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHLEQVKLQLTRDPRPLPRMEINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+PH I +V+V Sbjct: 241 GFQYEDFNLTGYDPHPHIKGEVAV 264 >gi|27574165|pdb|1NCE|A Chain A, Crystal Structure Of A Ternary Complex Of E. Coli Thymidylate Synthase D169c With Dump And The Antifolate Cb3717 gi|27574166|pdb|1NCE|B Chain B, Crystal Structure Of A Ternary Complex Of E. Coli Thymidylate Synthase D169c With Dump And The Antifolate Cb3717 Length = 264 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 199/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS VFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCCVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|114570577|ref|YP_757257.1| thymidylate synthase [Maricaulis maris MCS10] gi|114341039|gb|ABI66319.1| thymidylate synthase [Maricaulis maris MCS10] Length = 285 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 160/261 (61%), Positives = 199/261 (76%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL LLR +++ G+++ DRTGVGT S FG Q+R DLSKGFPLLTTKKVH+KS+ ELLWFL Sbjct: 25 YLALLRDILENGAEQADRTGVGTMSVFGRQLRCDLSKGFPLLTTKKVHFKSIAIELLWFL 84 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV +L GV IWDEWAD++G+LGP+YG QWR W DG IDQ+S+I++ +R +P Sbjct: 85 RGETNVRWLQERGVKIWDEWADENGDLGPVYGKQWRRWEGPDGTEIDQLSNILEQIRNNP 144 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVS WN A + MALPPCH L+QF V GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 145 ASRRLIVSGWNPADVPNMALPPCHTLYQFNVAGGKLSCQLYQRSADMFLGVPFNIASYAL 204 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A V G + GE+IHT GD H+Y+NH +Q QLSR+PR LPQ+ +NP+ DL F Sbjct: 205 LTAMVAQVCGLEPGEYIHTFGDAHIYSNHMDQVREQLSRAPRALPQLKLNPDATDLFGFE 264 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED L Y+PH I A V+V Sbjct: 265 YEDIALEGYDPHPRITAPVAV 285 >gi|119899486|ref|YP_934699.1| thymidylate synthase [Azoarcus sp. BH72] gi|166231687|sp|A1KAF7|TYSY_AZOSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119671899|emb|CAL95813.1| thymidylate synthase [Azoarcus sp. BH72] Length = 264 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV++ G + DRTG GT S FG+QMRF L++GFPLLTTKK+H +S++HELL Sbjct: 1 MQQYLDLMRHVLEHGDRKTDRTGTGTVSVFGWQMRFRLAEGFPLLTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RGD+N+ YL HGVSIWDEWAD++G+LGP+YG QWR W DG +DQ++ ++ ++ Sbjct: 61 WFIRGDTNIRYLKDHGVSIWDEWADENGDLGPVYGKQWRRWETADGRSVDQLAQLIDGIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN + MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRHIVSAWNPGEVGSMALPPCHALFQFYVAGGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+F+ T GD HLY NH +QA+ QL R+P LP+MI+NP + DL Sbjct: 181 YALLTMMVAQVCDLEPGDFVWTGGDCHLYLNHLQQAEEQLQRTPYPLPRMILNPEVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDFTL Y H I A V+V Sbjct: 241 AFRFEDFTLEGYTAHPHIKAPVAV 264 >gi|260462156|ref|ZP_05810400.1| thymidylate synthase [Mesorhizobium opportunistum WSM2075] gi|259032016|gb|EEW33283.1| thymidylate synthase [Mesorhizobium opportunistum WSM2075] Length = 264 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 172/264 (65%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV++ G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL Sbjct: 1 MRQYLDLLQHVLENGADRGDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWPD G IDQI+++++ +R Sbjct: 61 WFLAGDTNIKYLTDNGVSIWDEWADENGDLGPVYGKQWRSWPDGHGGSIDQIANLLKEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++ MALPPCHC+FQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCMFQFYVSEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA QL R+PR LP M INP + DL Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLRRTPRALPTMWINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L +Y A+I A ++V Sbjct: 241 AFRFEDFRLENYVADASIKAPIAV 264 >gi|326201561|ref|ZP_08191432.1| LOW QUALITY PROTEIN: thymidylate synthase [Clostridium papyrosolvens DSM 2782] gi|325988161|gb|EGD48986.1| LOW QUALITY PROTEIN: thymidylate synthase [Clostridium papyrosolvens DSM 2782] Length = 264 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL +H++ G + DRTG GT STFGYQMRFDL KGFPLLTTK +H KS++HELL Sbjct: 1 MQQYLDLCKHILNNGIKKEDRTGTGTISTFGYQMRFDLQKGFPLLTTKNLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSW DG IDQ+ +++ ++ Sbjct: 61 WFISGETNIKYLKENGVSIWDEWADENGDLGPVYGHQWRSWSTPDGRSIDQLKGVLEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVS+WNV+ I+KMALPPCHC +QFYV NG LSC LYQRS DVF+G+PFNIAS Sbjct: 121 NNPDSRRLIVSSWNVSDIEKMALPPCHCFYQFYVINGTLSCMLYQRSADVFIGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+L TMM+A G + GEF+HTLGD H+Y NH EQ +LQLSR R LP+M INP++ DL Sbjct: 181 YALFTMMIAQSCGLKAGEFVHTLGDAHIYLNHIEQVNLQLSRDTRALPKMNINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+Y DFTL Y+PH I V+V Sbjct: 241 DFKYSDFTLTDYDPHPNIKGAVAV 264 >gi|284037715|ref|YP_003387645.1| thymidylate synthase [Spirosoma linguale DSM 74] gi|283817008|gb|ADB38846.1| thymidylate synthase [Spirosoma linguale DSM 74] Length = 264 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLRH++ G+ + DRTG GT S FGYQMRF+L +GFPLLTTKKVH KS++HELL Sbjct: 1 MQQYHDLLRHILANGTRKTDRTGTGTISVFGYQMRFNLQEGFPLLTTKKVHTKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSW G VIDQ+ +++ L+ Sbjct: 61 WFIKGDTNIKYLKDNGVSIWDEWADENGDLGPVYGKQWRSWAGPQGQVIDQLQDVLRQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR I+SAWN A + MALPPCH L QFYV + KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NTPDSRRIIISAWNPADVPSMALPPCHLLMQFYVADNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G + EFI T GD HLY NH EQ + QL+R R LP M +NP++ + Sbjct: 181 YALLTMMIAQECGLEAHEFIWTGGDTHLYLNHLEQVETQLARDFRPLPTMRLNPDVRSVF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y DFTL +Y PH AI A V+V Sbjct: 241 DFTYADFTLENYNPHPAIKAPVAV 264 >gi|295400392|ref|ZP_06810371.1| thymidylate synthase [Geobacillus thermoglucosidasius C56-YS93] gi|312111082|ref|YP_003989398.1| thymidylate synthase [Geobacillus sp. Y4.1MC1] gi|294977667|gb|EFG53266.1| thymidylate synthase [Geobacillus thermoglucosidasius C56-YS93] gi|311216183|gb|ADP74787.1| thymidylate synthase [Geobacillus sp. Y4.1MC1] Length = 264 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 150/264 (56%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ +++ G + DRTG+GT S FG Q+RF+L +GFPLLTTKK+H +S+++ELL Sbjct: 1 MRQYLDLLQDILENGVPKEDRTGIGTFSVFGRQLRFNLQEGFPLLTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL +GV+IWDEWAD++G+LGP+YG QWRSW DG +DQIS +++ ++ Sbjct: 61 WFLRGDTNIRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQISWVIEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWNVA +D+M LPPCH FQFYV +GKLSC QRS D FLG+PFNIAS Sbjct: 121 RNPNSRRLLVNAWNVAELDEMKLPPCHYAFQFYVADGKLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G GE I + GDVHLY NH EQA LQL+R PR LP+++I + Sbjct: 181 YALLTHMIAQQCGLDVGELIFSGGDVHLYKNHIEQAKLQLTREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+PH I A V+V Sbjct: 241 EYKFEDFEIVGYDPHPHIKAPVAV 264 >gi|157692684|ref|YP_001487146.1| thymidylate synthase [Bacillus pumilus SAFR-032] gi|166991227|sp|A8FEB9|TYSY_BACP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157681442|gb|ABV62586.1| thymidylate synthase B [Bacillus pumilus SAFR-032] Length = 264 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L RHV++ G ++ DRTG GT STFGYQMRFDL +GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYKELCRHVLQHGDEKGDRTGTGTISTFGYQMRFDLQEGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELG +YG QWRSW DG +DQI+ ++ + Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGELGRVYGAQWRSWASGDGETVDQITKLIHDIE 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ID+MALPPCHCLFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPNSRRLIVSAWNPGEIDQMALPPCHCLFQFYVSNGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEF+HTLGD H+Y NH Q ++QL R R LPQ+ I ++ + Sbjct: 181 YALLTMMIAKVTNLEPGEFVHTLGDAHIYQNHLPQVNMQLEREERALPQLRITRDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L +Y+PH I +VSV Sbjct: 241 DFTFDDFVLENYDPHPHIKGEVSV 264 >gi|224536152|ref|ZP_03676691.1| hypothetical protein BACCELL_01018 [Bacteroides cellulosilyticus DSM 14838] gi|224522234|gb|EEF91339.1| hypothetical protein BACCELL_01018 [Bacteroides cellulosilyticus DSM 14838] Length = 264 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G + DRTG GT S FG+QMRF++ GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGVHKEDRTGTGTISVFGHQMRFNMEDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL HGV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS V+++ Sbjct: 61 WFLNGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGSIDQISEAVETIL 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I+ M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDINNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y+PH I KVSV Sbjct: 241 DFQYEDFELVNYDPHPHIAGKVSV 264 >gi|215794567|pdb|3BFI|A Chain A, E. Coli Thymidylate Synthase Y209m Mutant Complexed With 5- Nitro-Dump Length = 264 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 199/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HL +NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLMSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|302877663|ref|YP_003846227.1| thymidylate synthase [Gallionella capsiferriformans ES-2] gi|302580452|gb|ADL54463.1| thymidylate synthase [Gallionella capsiferriformans ES-2] Length = 264 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L++HV+ G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL Sbjct: 1 MRTYLNLMQHVLDNGTKKSDRTGTGTVSVFGYQMRFDLAQGFPLVTTKKCHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N+ YL HGV IWDEWAD+ G+LGP+YG QWRSW DG VIDQI V L+ Sbjct: 61 WFLQGYTNIGYLKEHGVKIWDEWADEHGDLGPVYGHQWRSWEAVDGRVIDQIKIAVDQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVSEGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V + G+F+HT GD HLY NH EQ LQLSR P LP M INP++ D+ Sbjct: 181 YALLTLMMAQVCNLEPGDFVHTFGDAHLYLNHLEQTQLQLSREPHPLPMMHINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDFTL Y+PH AI KV+V Sbjct: 241 SFKYEDFTLTGYDPHPAIKGKVAV 264 >gi|218264414|ref|ZP_03478271.1| hypothetical protein PRABACTJOHN_03967 [Parabacteroides johnsonii DSM 18315] gi|218222017|gb|EEC94667.1| hypothetical protein PRABACTJOHN_03967 [Parabacteroides johnsonii DSM 18315] Length = 264 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V++ G + DRTG GT S FG+QMRF+L GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLELLDRVLREGVKKEDRTGTGTYSVFGHQMRFNLEDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N YL +HGV IW+EWAD DG LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLQGDTNAKYLQKHGVRIWNEWADPDGNLGHIYGFQWRSWPDYKGGSIDQISEAVKTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS Q+YQRS D+FLG+PFNIAS Sbjct: 121 QNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQMYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQL+R PR LP+M INP + D+ Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHLEQVKLQLTRDPRPLPRMEINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+PH I +V+V Sbjct: 241 GFQYEDFNLTGYDPHPHIKGEVAV 264 >gi|259090368|pdb|3IX6|A Chain A, Crystal Structure Of Thymidylate Synthase Thya From Brucella Melitensis gi|259090369|pdb|3IX6|B Chain B, Crystal Structure Of Thymidylate Synthase Thya From Brucella Melitensis Length = 360 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 97 MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 156 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 157 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 216 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 217 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 276 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL Sbjct: 277 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 336 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 337 AFRFEDFRLDGYEADPTIKAPIAV 360 >gi|326800370|ref|YP_004318189.1| Thymidylate synthase [Sphingobacterium sp. 21] gi|326551134|gb|ADZ79519.1| Thymidylate synthase [Sphingobacterium sp. 21] Length = 273 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 170/273 (62%), Positives = 214/273 (78%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV + G D++DRTG GTRS FGYQMRF+L +GFPL+TTKK+H +S++HEL+ Sbjct: 1 MQQYLDLMRHVYEHGVDKQDRTGTGTRSVFGYQMRFNLQEGFPLVTTKKLHLRSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+SYL + VSIWDEWAD++G LGP+YG QWRSWP DG IDQI+ ++ L+ Sbjct: 61 WFLKGETNISYLKENKVSIWDEWADENGNLGPVYGSQWRSWPTPDGKHIDQIAQVIHQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG---------KLSCQLYQRSGDVF 171 +P SRR IVSAWNVA I+KMALPPCH FQFYV +LSCQLYQRS D+F Sbjct: 121 NNPDSRRIIVSAWNVAEIEKMALPPCHAFFQFYVAPPNKEKGQTKAQLSCQLYQRSADIF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V + +FIHTLGD HLY+NH EQA LQL+R+P++LP++ Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEAADFIHTLGDAHLYSNHLEQATLQLTRTPKSLPKLK 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP I + FRYEDFTL Y+PH I A+V+V Sbjct: 241 INPEIKSIFDFRYEDFTLVDYDPHPHIKAEVAV 273 >gi|138895327|ref|YP_001125780.1| thymidylate synthase [Geobacillus thermodenitrificans NG80-2] gi|166231703|sp|A4INY1|TYSY_GEOTN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|134266840|gb|ABO67035.1| Thymidylate synthase,TS, TSase [Geobacillus thermodenitrificans NG80-2] Length = 264 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 151/264 (57%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL +++ G ++ DRTGVGT S FG Q+RF+L GFPL+TTKK+H +S+++ELL Sbjct: 1 MRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGP+YG QWRSW DG +DQI+S+V+ ++ Sbjct: 61 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQIASVVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWNVA +DKM LPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 121 RNPNSRRLLVNAWNVAELDKMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G GE I T GDVHLY NH EQA LQL+R PR LP++++ + Sbjct: 181 YALLTHMIAEQCGLDVGELIFTGGDVHLYKNHIEQAKLQLTREPRPLPKLVLKRKPSSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF + Y+PH I A V+V Sbjct: 241 DYEYDDFEIVGYDPHPTIKAPVAV 264 >gi|189468577|ref|ZP_03017362.1| hypothetical protein BACINT_04980 [Bacteroides intestinalis DSM 17393] gi|189436841|gb|EDV05826.1| hypothetical protein BACINT_04980 [Bacteroides intestinalis DSM 17393] Length = 264 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G + DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGIHKEDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL HGV IW+EWAD++GELG IYG QWRSWPDY G IDQIS V+++ Sbjct: 61 WFLNGDTNAKYLQDHGVRIWNEWADENGELGHIYGYQWRSWPDYKGGSIDQISEAVETIL 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G + G+FIHTLGD H+Y NH EQ LQLSR PR LPQM INP++ + Sbjct: 181 YALLLQMMAQITGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y+PH I KVSV Sbjct: 241 DFQYEDFELVNYDPHPHIAGKVSV 264 >gi|300692074|ref|YP_003753069.1| thymidylate synthetase [Ralstonia solanacearum PSI07] gi|299079134|emb|CBJ51802.1| thymidylate synthetase [Ralstonia solanacearum PSI07] Length = 264 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 1 MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHSKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 61 WFLQGATNVRWLQENGVTIWDEWADADGELGPIYGYQWRSWPTPTGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD HLYNNHFEQ + QL+R P LP++ I + Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLAREPLPLPKLHIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ HAAI A V+V Sbjct: 241 DYQYEDFEIVGYQSHAAIKAPVAV 264 >gi|194017003|ref|ZP_03055616.1| thymidylate synthase [Bacillus pumilus ATCC 7061] gi|194011609|gb|EDW21178.1| thymidylate synthase [Bacillus pumilus ATCC 7061] Length = 264 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L RHV++ G ++ DRTG GT STFGYQMRFDL +GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYKELCRHVLQHGDEKGDRTGTGTISTFGYQMRFDLQEGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELG +YG QWRSW DG +DQI+ ++ + Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGELGRVYGAQWRSWASGDGETVDQITKLIHDIE 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ID+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPNSRRLIVSAWNPAEIDQMALPPCHCLFQFYVSHGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + GEF+HTLGD H+Y NH Q +QL R RTLPQ+ I ++ + Sbjct: 181 YALLTMMIAKVTNLEPGEFVHTLGDAHIYQNHLPQVKMQLEREERTLPQLRITRDVKSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L +Y+PH I +VSV Sbjct: 241 DFTFDDFVLENYDPHPHIKGEVSV 264 >gi|323143173|ref|ZP_08077870.1| thymidylate synthase [Succinatimonas hippei YIT 12066] gi|322417060|gb|EFY07697.1| thymidylate synthase [Succinatimonas hippei YIT 12066] Length = 264 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+R +++ G DR DRTG GTRS FG QMRFDL+KGFPLLTTKKVH +S++HELL Sbjct: 1 MKIYLDLMRRILEEGVDRSDRTGTGTRSIFGTQMRFDLNKGFPLLTTKKVHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSW DG VIDQIS+ V ++ Sbjct: 61 WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGKQWRSWAAPDGKVIDQISNAVDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++KMALPPCH LFQFYV NGKLSC LYQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNPADVEKMALPPCHALFQFYVANGKLSCLLYQRSCDFFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLTMM+A G+F+ T GD HLY+NHFEQA LQLSR+PR LP M+I + Sbjct: 181 YSLLTMMMAKECDLGLGDFVWTGGDTHLYSNHFEQAHLQLSRTPRALPTMLIKRKAPSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF L +Y+P+ I A V+V Sbjct: 241 DYKYEDFELINYDPYPVIKAPVAV 264 >gi|42524608|ref|NP_969988.1| thymidylate synthase [Bdellovibrio bacteriovorus HD100] gi|62901320|sp|Q6MID2|TYSY_BDEBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|39576818|emb|CAE78047.1| thyA [Bdellovibrio bacteriovorus HD100] Length = 264 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ V++ G + DRTG GT S FGYQMR++L +GFPLLTTKK+H +S+ HELL Sbjct: 1 MKQYHDLIKTVLEHGVKKEDRTGTGTISMFGYQMRYNLQEGFPLLTTKKLHTRSIFHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YLH + V+IWDEWAD++G LGP+YG QWRSW DG IDQI+++V+ ++ Sbjct: 61 WFLKGETNIKYLHDNKVTIWDEWADENGNLGPVYGKQWRSWETADGRTIDQITNVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V A+N +DKMALPPCH FQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPNSRRMLVVAFNPGDVDKMALPPCHAFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + G+F+HTLGD HLY NH EQA+LQL+R R LPQ+ +NP DL Sbjct: 181 YALLTHMIAQVCDLEVGDFVHTLGDAHLYLNHLEQANLQLTREFRPLPQLKLNPAKKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YED + Y+PH AI A+V+V Sbjct: 241 DFTYEDIEIIGYDPHPAIKAEVAV 264 >gi|320539709|ref|ZP_08039373.1| thymidylate synthetase [Serratia symbiotica str. Tucson] gi|320030321|gb|EFW12336.1| thymidylate synthetase [Serratia symbiotica str. Tucson] Length = 264 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 150/264 (56%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMNKVLAEGTSKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL + V+IWDEWAD++G+LGP+YG QWR+W DG IDQ+S+++Q L+ Sbjct: 61 WFLNGDTNVAYLRENNVTIWDEWADENGDLGPVYGKQWRAWGATDGRQIDQLSNVLQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV + +MAL PCH QFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QEPDSRRIIVSAWNVGELGQMALAPCHAFVQFYVAGGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQL+R PR LP+++I L Sbjct: 181 YALLVHMMAQQCYLEVGDFVWTGGDTHLYSNHMEQTQLQLTREPRPLPKLVIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +ED + Y+PH AI A V++ Sbjct: 241 DYCFEDLAIEGYDPHPAIKAPVAI 264 >gi|17545666|ref|NP_519068.1| thymidylate synthase [Ralstonia solanacearum GMI1000] gi|22096223|sp|Q8Y0U6|TYSY_RALSO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|17427959|emb|CAD14649.1| probable thymidylate synthase (ts) (tsase) protein [Ralstonia solanacearum GMI1000] Length = 264 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 1 MQPYLDLMRHVHEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD +GELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 61 WFLQGATNVRWLRENGVTIWDEWADAEGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD HLYNNHFEQ + QL+R+P LP++ I + Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF + YE H AI A V+V Sbjct: 241 DYRYEDFEIVGYESHPAIKAPVAV 264 >gi|319786162|ref|YP_004145637.1| thymidylate synthase [Pseudoxanthomonas suwonensis 11-1] gi|317464674|gb|ADV26406.1| thymidylate synthase [Pseudoxanthomonas suwonensis 11-1] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL HV+ G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLELLAHVLGHGTDKPDRTGTGTRSVFGWQMRFDLRQGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL + VSIWDEWAD GELGP+YG QWR W DG+ IDQI +V+ ++ Sbjct: 61 WFLKGETNIAYLKENKVSIWDEWADGQGELGPVYGKQWRRWTGSDGSEIDQIRWVVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + KMAL PCH LFQFYV +G+LSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLLVSAWNVADLPKMALMPCHTLFQFYVADGRLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QLSR PR LP++ +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLQLNPEVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYED + Y+P AI A V+V Sbjct: 241 DFRYEDIAIEGYDPAPAIKAPVAV 264 >gi|319782912|ref|YP_004142388.1| thymidylate synthase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168800|gb|ADV12338.1| thymidylate synthase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 175/264 (66%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV+ G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL Sbjct: 1 MRQYLDLLQHVLDNGADRGDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL HGVSIWDEWAD++G+LGP+YG QWRSWPD G IDQI+++++ +R Sbjct: 61 WFLAGDTNIKYLTDHGVSIWDEWADENGDLGPVYGKQWRSWPDGHGGSIDQIANLLKEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++ MALPPCHCLFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSQGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA QL R+PRTLP M INP + DL Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLRRTPRTLPTMWINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L +Y A+I A ++V Sbjct: 241 AFRFEDFRLENYVADASIKAPIAV 264 >gi|238792783|ref|ZP_04636414.1| Thymidylate synthase [Yersinia intermedia ATCC 29909] gi|238727891|gb|EEQ19414.1| Thymidylate synthase [Yersinia intermedia ATCC 29909] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S++V+ L+ Sbjct: 61 WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +++MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ +LQLSR PR LP++II L Sbjct: 181 YALLVHMMAQQCELDVGDFVWTGGDTHLYSNHIEQTNLQLSREPRALPKLIIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A +++ Sbjct: 241 DYRFEDFDIEGYDPHPGIKAPIAI 264 >gi|217035336|pdb|3BGX|A Chain A, E. Coli Thymidylate Synthase C146s Mutant Complexed With Dtmp And Mtf Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 199/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL P H FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|325269975|ref|ZP_08136584.1| thymidylate synthase [Prevotella multiformis DSM 16608] gi|324987698|gb|EGC19672.1| thymidylate synthase [Prevotella multiformis DSM 16608] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL ++ G + DRTG GT S FG QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLNLLDRILTEGIQKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G LGP+YG QWRSWPDY G IDQI ++V+ +R Sbjct: 61 WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQIKNVVEMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 NNPNSRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEF+HT GD HLY NH EQA LQL+R P LP+M INP + D+ Sbjct: 181 YALLLQMMAQVTGLEAGEFVHTTGDTHLYLNHLEQARLQLTREPHPLPKMKINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF YEDF L Y P I A+VSV Sbjct: 241 SFEYEDFELTDYHPWPHISAEVSV 264 >gi|325860307|ref|ZP_08173429.1| thymidylate synthase [Prevotella denticola CRIS 18C-A] gi|325482186|gb|EGC85197.1| thymidylate synthase [Prevotella denticola CRIS 18C-A] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL ++ G+++ DRTG GT S FG QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLNLLNCILTEGAEKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G LGP+YG QWRSWPDY G IDQIS++V+ +R Sbjct: 61 WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQISNVVEMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HCPESRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFRYEDF L Y P I A+V+V Sbjct: 241 SFRYEDFELTDYHPWPHISAEVAV 264 >gi|299066921|emb|CBJ38116.1| thymidylate synthetase [Ralstonia solanacearum CMR15] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 1 MQPYLDLMRHVHEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD +GELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 61 WFLQGATNVRWLRENGVTIWDEWADAEGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD HLYNNHFEQ + QL+R+P LP++ I + Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF + YE H AI A V+V Sbjct: 241 DYRYEDFEIVGYESHPAIKAPVAV 264 >gi|299131893|ref|ZP_07025088.1| thymidylate synthase [Afipia sp. 1NLS2] gi|298592030|gb|EFI52230.1| thymidylate synthase [Afipia sp. 1NLS2] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL ++ G+ + DRTG GT S FG+QMRF+L+ GFP+ TTKK+ +K++VHELL Sbjct: 1 MHQYHDLLERILSDGAQKGDRTGTGTLSVFGHQMRFNLAAGFPMTTTKKLPFKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV+IWDEWAD +G+LGP+YG QWRSW DG IDQI+++++ +R Sbjct: 61 WFLAGDTNVRYLQNNGVTIWDEWADANGDLGPVYGKQWRSWQAPDGRSIDQIANLIRMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A +D MALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TTPDSRRLIVSAWNPADVDHMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G+FIHTLGD HLY+NH EQA LQL+R PR LP + INP + D+ Sbjct: 181 YALLTMMIAQVTDLAPGDFIHTLGDAHLYSNHLEQARLQLTRRPRALPAVHINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L +Y+PH I A+V+V Sbjct: 241 GFRYEDFKLENYDPHPHIKAEVAV 264 >gi|319779101|ref|YP_004130014.1| Thymidylate synthase [Taylorella equigenitalis MCE9] gi|317109125|gb|ADU91871.1| Thymidylate synthase [Taylorella equigenitalis MCE9] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D +RHV + G D+ DRTG GT+S F YQMRFDL +GFP++TTKK+H KS+++ELL Sbjct: 1 MRQYEDFMRHVFETGVDKTDRTGTGTKSVFAYQMRFDLQEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSN +L GVSIW+EWAD++GELGPIYGVQWRSWP DG IDQIS +V ++ Sbjct: 61 WFLRGDSNAKWLQERGVSIWNEWADENGELGPIYGVQWRSWPAPDGTKIDQISQVVDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV LI +M LPPCH FQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGLIPQMKLPPCHAFFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A GEFI T GD H+Y+NHFEQ QLSR P P++ I + Sbjct: 181 YSLLTHMIAQQCNLDVGEFIWTGGDCHIYSNHFEQVKEQLSRDPYPYPKLHIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+ H I A V+V Sbjct: 241 DYEFEDFEVMDYQHHPHIKAPVAV 264 >gi|256425405|ref|YP_003126058.1| thymidylate synthase [Chitinophaga pinensis DSM 2588] gi|256040313|gb|ACU63857.1| thymidylate synthase [Chitinophaga pinensis DSM 2588] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL+H+I GS + DRTG GT S FG Q+RF+L +GFP++TTKKVH KS+++ELL Sbjct: 1 MEQYLKLLQHIIDQGSVKTDRTGTGTTSCFGAQLRFNLQEGFPMVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL HGVSIWDEWAD++G+LGP+YG QWRSW DG VIDQI+ V++++ Sbjct: 61 WFLNGDTNIKYLKDHGVSIWDEWADENGDLGPVYGKQWRSWETKDGKVIDQITEAVKTIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNV + MAL PCHCLFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPDSRRIIVNAWNVGDLPDMALSPCHCLFQFYVAEGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y++LTMM+A V + G+F+HT GDVHLY+NH EQA LQLSR P LP + INP + D+ Sbjct: 181 YAILTMMMAQVCDLEPGDFVHTFGDVHLYSNHMEQAKLQLSRQPFELPVLKINPAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+ H I A V++ Sbjct: 241 GFKFEDFELLNYQHHPHIKAPVAI 264 >gi|241205506|ref|YP_002976602.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859396|gb|ACS57063.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M I P++ D+ Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L YE A+I A ++V Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264 >gi|56420311|ref|YP_147629.1| thymidylate synthase [Geobacillus kaustophilus HTA426] gi|261419980|ref|YP_003253662.1| thymidylate synthase [Geobacillus sp. Y412MC61] gi|297530062|ref|YP_003671337.1| thymidylate synthase [Geobacillus sp. C56-T3] gi|319766795|ref|YP_004132296.1| thymidylate synthase [Geobacillus sp. Y412MC52] gi|62901180|sp|Q5KZ25|TYSY_GEOKA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|56380153|dbj|BAD76061.1| thymidylate synthetase [Geobacillus kaustophilus HTA426] gi|261376437|gb|ACX79180.1| thymidylate synthase [Geobacillus sp. Y412MC61] gi|297253314|gb|ADI26760.1| thymidylate synthase [Geobacillus sp. C56-T3] gi|317111661|gb|ADU94153.1| thymidylate synthase [Geobacillus sp. Y412MC52] Length = 264 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL +++ G ++ DRTGVGT S FG Q+RF+L GFPL+TTKK+H +S+++ELL Sbjct: 1 MRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGPIYG QWRSW DG IDQI+ +V+ ++ Sbjct: 61 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTIDQIAWVVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA +D+M LPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 121 RNPNSRRLLVSAWNVAELDEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A GE I T GDVHLY NH EQA LQL+R PR LP+++I + Sbjct: 181 YALLTHMIAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPPSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF + Y PH I A V+V Sbjct: 241 DYEYDDFEIVGYNPHPTIKAPVAV 264 >gi|319763676|ref|YP_004127613.1| thymidylate synthase [Alicycliphilus denitrificans BC] gi|330824059|ref|YP_004387362.1| thymidylate synthase [Alicycliphilus denitrificans K601] gi|317118237|gb|ADV00726.1| thymidylate synthase [Alicycliphilus denitrificans BC] gi|329309431|gb|AEB83846.1| thymidylate synthase [Alicycliphilus denitrificans K601] Length = 271 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 192/264 (72%), Gaps = 1/264 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DL+RHV + G + DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS++ ELLW Sbjct: 8 HQYEDLMRHVFEHGVAKGDRTGTGTRSVFGHQMRFDLREGFPLVTTKKVHLKSIILELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 FL+G N +L GV+IWDEWAD G+LGP+YGVQWRSWP G IDQIS +V+ LR Sbjct: 68 FLQGSGNARWLQERGVTIWDEWADPTSGDLGPVYGVQWRSWPTPGGGHIDQISQVVEQLR 127 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +DKMAL PCH FQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 128 TNPDSRRIIVSAWNVAELDKMALMPCHAFFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 187 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA + G+FI T GD H+Y+NHFEQ QL+R PR P + I + Sbjct: 188 YALLTHMLAQQCDLEVGDFIWTGGDCHIYSNHFEQVRTQLAREPRPYPTLRIKRRPPSIF 247 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF + Y+PH I A V+V Sbjct: 248 DYGYEDFEVEGYDPHPPIKAPVAV 271 >gi|327313463|ref|YP_004328900.1| thymidylate synthase [Prevotella denticola F0289] gi|326946204|gb|AEA22089.1| thymidylate synthase [Prevotella denticola F0289] Length = 264 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL ++ G+ + DRTG GT S FG QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MQQYLNLLNRILTEGAQKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G LGP+YG QWRSWPDY G IDQIS++ + +R Sbjct: 61 WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQISNVEEMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HCPESRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFRYEDF L Y P I A+V+V Sbjct: 241 SFRYEDFELADYHPWPHISAEVAV 264 >gi|294478969|gb|ADE87534.1| thymidylate synthase [Deep-sea thermophilic phage D6E] Length = 264 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ +++ G ++ DRTG GT S FG Q+RF+L GFPL+TTKK+H +S+++ELL Sbjct: 1 MKQYLDLLQDILENGVEKEDRTGTGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGPIYG QWRSW DG +DQI+++ + ++ Sbjct: 61 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTVDQIAAVFKEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + +M LPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 121 RNPNSRRLLVSAWNVAKLGEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A GE I T GDVHLY NH EQA LQL+R PR LP+++I + Sbjct: 181 YALLTHMVAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPPSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF Y+PH AI A VSV Sbjct: 241 DYEYEDFEFVGYDPHPAIKAPVSV 264 >gi|154686429|ref|YP_001421590.1| thymidylate synthase [Bacillus amyloliquefaciens FZB42] gi|166231688|sp|A7Z5T3|TYSY_BACA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|154352280|gb|ABS74359.1| ThyB [Bacillus amyloliquefaciens FZB42] Length = 264 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS ++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ID MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDHMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R R LP++ N+ + Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF + Y+PH I VSV Sbjct: 241 DFTFEDFIIEDYDPHPHIKGAVSV 264 >gi|239827018|ref|YP_002949642.1| thymidylate synthase [Geobacillus sp. WCH70] gi|259550783|sp|C5DAR2|TYSY_GEOSW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|239807311|gb|ACS24376.1| thymidylate synthase [Geobacillus sp. WCH70] Length = 264 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL +++ G ++ DRTGVGT S FG Q+RF+L +GFPLLTTKK+H +S+++ELL Sbjct: 1 MRQYLQLLEDILENGVEKDDRTGVGTLSVFGRQLRFNLQEGFPLLTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGPIYG QWRSW DG +DQIS +++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTVDQISWVIEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA +DKM LPPCH FQFYV +GKLSC QRS D FLG+PFNIAS Sbjct: 121 RNPNSRRLLVSAWNVAELDKMKLPPCHYAFQFYVADGKLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A GE I + GDVHLY NH EQA LQL+R PR LP+++I + Sbjct: 181 YALLTHMIAQQCDLDVGELIFSGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+PH I A V+V Sbjct: 241 EYEFEDFEIVDYDPHPHIKAPVAV 264 >gi|209884416|ref|YP_002288273.1| thymidylate synthase [Oligotropha carboxidovorans OM5] gi|229558058|sp|B6JB67|TYSY_OLICO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|209872612|gb|ACI92408.1| thymidylate synthase [Oligotropha carboxidovorans OM5] Length = 264 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL H++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+ +K++VHELL Sbjct: 1 MHQYQDLLEHILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKKLPFKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GVSIWDEWAD +G+LGP+YG QWRSW DG IDQI+++VQ +R Sbjct: 61 WFLAGDTNVRYLQNNGVSIWDEWADANGDLGPVYGKQWRSWQAPDGRSIDQITNLVQMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A +++MALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVTAWNPADVEQMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V G F+HT GD HLY+NH +QA LQL+R+PR LP + INP + D+ Sbjct: 181 YALLMMMIAQVTDLAPGHFVHTFGDAHLYSNHLDQARLQLTRAPRALPTLRINPAVRDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L +Y+PH I A+V+V Sbjct: 241 GFRYEDFKLENYDPHPHIKAEVAV 264 >gi|325282128|ref|YP_004254670.1| Thymidylate synthase [Odoribacter splanchnicus DSM 20712] gi|324313937|gb|ADY34490.1| Thymidylate synthase [Odoribacter splanchnicus DSM 20712] Length = 264 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G+++ DRTG GT S FG+QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MRQYLDLLDRILSEGAEKTDRTGTGTISVFGHQMRFDLQAGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD DG+LG IYG QWRSWP DG +DQI+ +V ++ Sbjct: 61 WFLKGDTNVKYLQDHGVKIWNEWADADGDLGHIYGYQWRSWPRPDGTHLDQIAQVVHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN I+ MAL PCH LFQFYV GKLSCQLYQRS D FLG+PFNIAS Sbjct: 121 NNPDSRRLIVSAWNAGDIENMALAPCHALFQFYVVGGKLSCQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G Q GEF+HTLGD H+Y NH EQ LQLSR PR LPQM INP + D+L Sbjct: 181 YALLTLMMAQVCGLQPGEFVHTLGDAHIYLNHIEQVRLQLSREPRALPQMHINPAVKDIL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH I +SV Sbjct: 241 GFRYEDFELTGYDPHPHIKGAISV 264 >gi|238918743|ref|YP_002932257.1| thymidylate synthase, [Edwardsiella ictaluri 93-146] gi|259550777|sp|C5BH86|TYSY_EDWI9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|238868311|gb|ACR68022.1| thymidylate synthase, putative [Edwardsiella ictaluri 93-146] Length = 264 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMRKVLAEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++NVSYLH + V+IWDEWAD +G+LGP+YG QWR+W DG +DQIS +++ LR Sbjct: 61 WFLNGETNVSYLHENNVTIWDEWADDNGDLGPVYGKQWRAWGCADGRQVDQISQVMEQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MAL PCH FQFYV +G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QEPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + Q G+F+ T GD HLY+NH EQ LQL+R PR LP++++ + Sbjct: 181 YALLVHMMAQQLDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRALPRLVLARRPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V+V Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAV 264 >gi|332285402|ref|YP_004417313.1| thymidylate synthase [Pusillimonas sp. T7-7] gi|330429355|gb|AEC20689.1| thymidylate synthase [Pusillimonas sp. T7-7] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY D +RHV + G+++ DRTG GTRS FG+QMRFDLS GFPL+T+KK+H KS+ ELL Sbjct: 1 MHQYEDFMRHVYEHGTEKTDRTGTGTRSVFGHQMRFDLSAGFPLITSKKLHTKSIFIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSNV +L GVSIW+EWAD++G+LGP+YGVQWRSWP G IDQI+ ++Q +R Sbjct: 61 WFLRGDSNVRWLQEQGVSIWNEWADQNGDLGPVYGVQWRSWPTPGGQHIDQIAQVLQQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QNPDSRRLIVSAWNVAEIPNMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+FI T GD HLY+NH EQ +LQLSR P P++ I + Sbjct: 181 YALLTHMVAQQCDLEVGDFIWTGGDCHLYSNHMEQVELQLSRKPYPYPKLQIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF + YE H I A V+V Sbjct: 241 DYRYEDFEIVGYESHPHIKAPVAV 264 >gi|56964719|ref|YP_176450.1| thymidylate synthase [Bacillus clausii KSM-K16] gi|62901226|sp|Q5WDS1|TYSY_BACSK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|56910962|dbj|BAD65489.1| thymidylate synthase [Bacillus clausii KSM-K16] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L HV++ GS + DRTG GT S FGYQMRFDL KGFP++TTKK+H +S++HELL Sbjct: 1 MEQYLQLCEHVLQNGSPKSDRTGTGTISVFGYQMRFDLEKGFPIVTTKKLHMRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD++G+LGP+YG QWRSW +G +DQI+ +V+ ++ Sbjct: 61 WFLKGDTNIRYLQENGVRIWNEWADENGDLGPVYGKQWRSWEGANGKTVDQITEVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNVA I++MAL PCHCLFQFYV++GKLSCQLYQRS D+FLG+PFNI+S Sbjct: 121 TNPNSRRLIVNAWNVAEIEEMALAPCHCLFQFYVNDGKLSCQLYQRSADIFLGVPFNISS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GD HLYNNH EQ LQL+R P+ LP M INP + DL Sbjct: 181 YALLTMMMAQVCGLKPGEFIHTFGDAHLYNNHIEQTKLQLTRKPKQLPTMHINPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F Y+DF L+ Y+P+ I A+VSV Sbjct: 241 AFTYDDFELKHYDPYPHIKAEVSV 264 >gi|91794130|ref|YP_563781.1| thymidylate synthase [Shewanella denitrificans OS217] gi|123060707|sp|Q12KG8|TYSY_SHEDO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91716132|gb|ABE56058.1| thymidylate synthase [Shewanella denitrificans OS217] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L+ H++ G+ + DRTG GTRS FGYQMRFDL++GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLALMEHILAHGAVKTDRTGTGTRSVFGYQMRFDLNQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH H VSIWDEWAD G LGP+YG QWRSWP G +DQIS I++ ++ Sbjct: 61 WFLQGDTNVAYLHEHNVSIWDEWADDKGNLGPVYGAQWRSWPTQSGKAVDQISQIIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV +DKMAL PCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TQPDSRRLIVSAWNVGELDKMALAPCHALFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G+F+ T GD HLY+NH EQ LQLSR P LPQM I + Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTKLQLSREPHALPQMNILRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L +Y+PH I A V++ Sbjct: 241 DYQFDDFELVNYQPHPHIKAPVAI 264 >gi|315608816|ref|ZP_07883792.1| thymidylate synthase [Prevotella buccae ATCC 33574] gi|315249510|gb|EFU29523.1| thymidylate synthase [Prevotella buccae ATCC 33574] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR ++ G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLRRILDEGTPKGDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LGP+YG QWRSWPDY G IDQI +++ + Sbjct: 61 WFLKGDTNVRYLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLDQIM 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWN A +D MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 RTPDSRRMMVSAWNPAEVDDMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G+FIHT GD HLY NH QA LQL+R+PR LP M +NP + L Sbjct: 181 YALLTMMMAQVTRLRPGDFIHTTGDTHLYLNHLSQARLQLTRTPRPLPTMRLNPEVKSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDFTL +Y+P+ I A VSV Sbjct: 241 DFRFEDFTLENYDPYDHIKATVSV 264 >gi|283779094|ref|YP_003369849.1| thymidylate synthase [Pirellula staleyi DSM 6068] gi|283437547|gb|ADB15989.1| thymidylate synthase [Pirellula staleyi DSM 6068] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y L++ ++ G+ + DRTG GT S FG+QMRFDLS+GFP +TTKK+H +S++HELL Sbjct: 1 MEAYHQLMQRILDHGARKTDRTGTGTLSVFGHQMRFDLSQGFPAVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RG++N +YL + VSIWDEWAD +G LGP+YG QWRSWP DG IDQ++ ++ ++ Sbjct: 61 WFIRGETNTAYLKENKVSIWDEWADSEGNLGPVYGRQWRSWPTPDGRQIDQLAEVIARIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +++MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RDPDSRRLIVSAWNVGELEQMALPPCHLLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G G+F+HTLGD HLY+NH EQA LQLSR PR LP M INP + ++ Sbjct: 181 YALLTMMVAQVTGLALGDFVHTLGDAHLYSNHLEQAQLQLSREPRPLPTMQINPAVTEID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++DF L Y+PH I A V+V Sbjct: 241 AFTFDDFKLVGYDPHPHIAAPVAV 264 >gi|306843264|ref|ZP_07475873.1| thymidylate synthase [Brucella sp. BO2] gi|306286530|gb|EFM58113.1| thymidylate synthase [Brucella sp. BO2] Length = 264 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 220/264 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ LR Sbjct: 61 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ANPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRMPKKLPVMHINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264 >gi|300704706|ref|YP_003746309.1| thymidylate synthetase [Ralstonia solanacearum CFBP2957] gi|299072370|emb|CBJ43708.1| thymidylate synthetase [Ralstonia solanacearum CFBP2957] Length = 264 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 1 MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQRGFPLVTTKKVHIKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 61 WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+ T GD HLYNNHFEQ + QL+R+P LP++ I + Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARAPLPLPKLHIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+ HAAI A V+V Sbjct: 241 DYQFEDFEIVGYQSHAAIKAPVAV 264 >gi|308173974|ref|YP_003920679.1| thymidylate synthase B [Bacillus amyloliquefaciens DSM 7] gi|307606838|emb|CBI43209.1| thymidylate synthase B [Bacillus amyloliquefaciens DSM 7] gi|328553100|gb|AEB23592.1| thymidylate synthase [Bacillus amyloliquefaciens TA208] gi|328912128|gb|AEB63724.1| thymidylate synthase B [Bacillus amyloliquefaciens LL3] Length = 264 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS ++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R R LP++ N+ + Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF + Y+PH I VSV Sbjct: 241 DFAFEDFIIEDYDPHPHIKGAVSV 264 >gi|282858545|ref|ZP_06267716.1| thymidylate synthase [Prevotella bivia JCVIHMP010] gi|282588670|gb|EFB93804.1| thymidylate synthase [Prevotella bivia JCVIHMP010] Length = 264 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR + G + DRTG GT S FG+QMRF+++ GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLRRITTEGVKKEDRTGTGTLSVFGHQMRFNMADGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL HGV IW+EWAD++G+LGPIYG QWRSWPDY G IDQI ++++ ++ Sbjct: 61 WFLNGDTNVKYLQEHGVRIWNEWADENGDLGPIYGHQWRSWPDYKGGAIDQIKNVLEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWN A ++ MALPPCHCLFQFYV +GKLS QLYQRS D FLG+PFNIAS Sbjct: 121 NTPDSRRMLVSAWNPAEVENMALPPCHCLFQFYVASGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD HLY NH EQ +LQL+R+PR LP+M INP++ DL Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQVELQLTRTPRPLPKMNINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF YEDF L Y P+ I V+V Sbjct: 241 SFNYEDFQLEDYAPYPHISGIVAV 264 >gi|300774218|ref|ZP_07084085.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33861] gi|300758897|gb|EFK55726.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33861] Length = 273 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 165/273 (60%), Positives = 206/273 (75%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV G + DRTG GT+S FGYQMRF+L +GFPL+TTKK+H +S++HEL+ Sbjct: 1 MKQYLDLLKHVYTNGVTKTDRTGTGTKSVFGYQMRFNLKEGFPLVTTKKLHLRSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD+ G LGP+YG QWRSWP G IDQI+ +++ L+ Sbjct: 61 WFLKGETNIQYLKENGVSIWDEWADEQGNLGPVYGSQWRSWPTPAGEHIDQIAQVIKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLYQRSGDVF 171 P SRR IVSAWNVA I+ MALPPCH FQFYV +LSCQLYQRS D+F Sbjct: 121 NTPDSRRIIVSAWNVAEIEHMALPPCHAFFQFYVAPAQPEAGILKPQLSCQLYQRSADIF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V + EFIHTLGD H+Y+NHFEQ +LQLSR P+ LP+MI Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEPAEFIHTLGDAHIYSNHFEQTELQLSRDPKPLPKMI 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP++ D+ F++ DF L YE H I A V+V Sbjct: 241 INPDVRDIFDFKFGDFELVDYESHPHIKAPVAV 273 >gi|310642333|ref|YP_003947091.1| thymidylate synthase 2 [Paenibacillus polymyxa SC2] gi|309247283|gb|ADO56850.1| Thymidylate synthase 2 [Paenibacillus polymyxa SC2] Length = 264 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL +++ G + DRTG GT S FG Q+RFDL+KGFPL+TTK+VH KSV+HELL Sbjct: 1 MRNYLELLEDILENGVKKEDRTGTGTLSVFGRQLRFDLAKGFPLVTTKRVHLKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL +GVSIWDEWAD+ G LGP+YG QWR+W DG IDQI++++++++ Sbjct: 61 WFLRGDTNIAYLKENGVSIWDEWADEQGNLGPVYGSQWRAWETPDGQHIDQIANVIEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA I+ M LPPCH +FQFYV GKLSC L RS D FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVAEIESMKLPPCHFVFQFYVAGGKLSCMLTMRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + GEFI + GDVH+Y+NH +Q QL R P LPQ+ I + Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHIQQVHTQLERDPYPLPQLKILRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +YE H I A V++ Sbjct: 241 DYTYEDFVFENYEHHPGIKAPVAI 264 >gi|225024585|ref|ZP_03713777.1| hypothetical protein EIKCOROL_01462 [Eikenella corrodens ATCC 23834] gi|224942647|gb|EEG23856.1| hypothetical protein EIKCOROL_01462 [Eikenella corrodens ATCC 23834] Length = 257 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 169/257 (65%), Positives = 214/257 (83%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 ++H++ G+D+ DRTG GTRS FG+QMRFDL++GFPLLTTKK+H +S++HELLWFL+GD+ Sbjct: 1 MQHILSHGTDKSDRTGTGTRSVFGHQMRFDLAQGFPLLTTKKLHLRSIIHELLWFLKGDT 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ +P SRR Sbjct: 61 NIRYLKENNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIKRNPDSRR 120 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 IVSAWN AL+D+MALPPCH LFQFYV G+LSCQLYQRS DVFLG+PFNIASY+LLTMM Sbjct: 121 LIVSAWNPALVDEMALPPCHALFQFYVAEGRLSCQLYQRSADVFLGVPFNIASYALLTMM 180 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A V G GEFIHT GD HLY+NHFEQA LQL+R PR LPQM +NP + +L FR+EDF Sbjct: 181 MAQVCGLAPGEFIHTFGDAHLYSNHFEQARLQLTREPRALPQMQLNPEVQNLFDFRFEDF 240 Query: 248 TLRSYEPHAAILAKVSV 264 L++Y+PH I A+V+V Sbjct: 241 ELQNYDPHPHIKAQVAV 257 >gi|205373119|ref|ZP_03225923.1| thymidylate synthase [Bacillus coahuilensis m4-4] Length = 264 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L ++K G + DRTG GT STFGYQMR++L GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLHLCEEILKNGVKKEDRTGTGTISTFGYQMRYNLQDGFPLVTTKKLHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD++GELGP+YG QWRSW +G IDQIS ++ ++ Sbjct: 61 WFLKGDTNIKYLQDNGVRIWNEWADENGELGPVYGHQWRSWTGSNGETIDQISQLIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ++ MALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QNPNSRRLIVSAWNVADVNHMALPPCHCLFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V + G+FIHTLGD H+Y+NH EQ +LQL+R + LP+M +NP I D+ Sbjct: 181 YALLTLMIAQVCDLEPGDFIHTLGDAHIYSNHVEQVELQLTREVKDLPKMKLNPEIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF+L Y+PH I VSV Sbjct: 241 NFTFEDFSLEGYDPHPHIKGIVSV 264 >gi|86358403|ref|YP_470295.1| thymidylate synthase [Rhizobium etli CFN 42] gi|123724761|sp|Q2K6G8|TYSY_RHIEC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|86282505|gb|ABC91568.1| thymidylate synthase protein [Rhizobium etli CFN 42] Length = 264 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S+VHELL Sbjct: 1 MQQYLDLLAHVMEKGSDRGDRTGTGTRSVFGYQMRFDLGEGFPVLTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPNSRRHIVSAWNPAEVDQMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLKGGDFVHTLGDAHLYHNHFDQAKLQLTRRPKPLPFMRINPEVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L YE A+I A ++V Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264 >gi|86749158|ref|YP_485654.1| thymidylate synthase [Rhodopseudomonas palustris HaA2] gi|123408309|sp|Q2IYG7|TYSY_RHOP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|86572186|gb|ABD06743.1| thymidylate synthase [Rhodopseudomonas palustris HaA2] Length = 264 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G+++ DRTG GT S FG+Q+RFDL+ GFP+LTTK++ K+++HELL Sbjct: 1 MIPYHDLLERILSDGAEKHDRTGTGTLSVFGHQLRFDLAAGFPMLTTKRLPLKAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI+ +V +R Sbjct: 61 WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGRSIDQIAHVVDMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A ++KMALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ Sbjct: 181 YALLTMMVAQVTGLKPGDFIHTLGDAHLYSNHLEQARLQLTRAPRALPAMAINPAVTDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDFTL Y+PH I A+V+V Sbjct: 241 GFRYEDFTLHGYDPHPHIKAEVAV 264 >gi|7766862|pdb|1EVG|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli With Unmodified Catalytic Cysteine Length = 264 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 200/263 (76%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRTCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|149926867|ref|ZP_01915126.1| thymidylate synthase [Limnobacter sp. MED105] gi|149824419|gb|EDM83637.1| thymidylate synthase [Limnobacter sp. MED105] Length = 264 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV+ G+D+ DRTG GTRS FGYQMRF+L GFP++TTKK+H +S++HELL Sbjct: 1 MQQYLDLMQHVLDHGTDKMDRTGTGTRSVFGYQMRFNLQDGFPMVTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GDSN+ YL +GVSIWDEWAD++G LGP+YGVQWRSWP DG IDQIS ++Q ++ Sbjct: 61 WFLMGDSNIRYLKENGVSIWDEWADENGNLGPVYGVQWRSWPTADGRHIDQISQLMQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA I+ M LPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVADINNMKLPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G+F+ T GD HLY+NH EQ QLSR P LP + I + Sbjct: 181 YALLTHMVAQQCDLDVGDFVWTGGDCHLYSNHMEQVAEQLSRKPHPLPTLQIKRKPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + +Y H I A V+V Sbjct: 241 DYKFEDFEILNYTCHPHIKAPVAV 264 >gi|294635084|ref|ZP_06713597.1| thymidylate synthase [Edwardsiella tarda ATCC 23685] gi|291091524|gb|EFE24085.1| thymidylate synthase [Edwardsiella tarda ATCC 23685] Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLDLMRKVLDEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV+YLH + V+IWDEWAD+ G+LGP+YG QWR+W DG +DQIS ++ LR Sbjct: 61 WFLKGETNVNYLHDNNVTIWDEWADEQGDLGPVYGKQWRAWGCADGRQVDQISQVMAQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP++++ + Sbjct: 181 YALLVHMMAQQLDLAVGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPRLVLARRPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH AI A V++ Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAI 264 >gi|82411148|gb|ABB75257.1| thymidylate synthase [Nitrosospira multiformis ATCC 25196] Length = 285 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H KS+++ELL Sbjct: 22 MRQYLDLMQHVLEHGQKKSDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKLHLKSIIYELL 81 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ + VSIWDEWAD++G+LGPIYG QWRSWP+ G IDQI +V+ +R Sbjct: 82 WFLKGDTNIRYLNENDVSIWDEWADENGDLGPIYGRQWRSWPNGKGGHIDQIEQVVEQIR 141 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VS+WNV + +M L PCH LFQFYV KLSCQLYQRS D+FLG+PFNIAS Sbjct: 142 NTPDSRRMLVSSWNVGELQEMKLAPCHALFQFYVAEDKLSCQLYQRSADIFLGVPFNIAS 201 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+MLA + GEF+HT GD HLY NH EQA QL R P+ LP M +NP I ++ Sbjct: 202 YALLTLMLAQSCDLRAGEFVHTFGDAHLYLNHLEQAREQLERGPKKLPIMKLNPAIRNVF 261 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH +I A ++V Sbjct: 262 DFRYEDFNLEGYDPHPSIKAPIAV 285 >gi|17986891|ref|NP_539525.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M] gi|23502270|ref|NP_698397.1| thymidylate synthase [Brucella suis 1330] gi|62290293|ref|YP_222086.1| thymidylate synthase [Brucella abortus bv. 1 str. 9-941] gi|82700216|ref|YP_414790.1| thymidylate synthase [Brucella melitensis biovar Abortus 2308] gi|163843654|ref|YP_001628058.1| thymidylate synthase [Brucella suis ATCC 23445] gi|189024526|ref|YP_001935294.1| thymidylate synthase [Brucella abortus S19] gi|225627851|ref|ZP_03785888.1| thymidylate synthase [Brucella ceti str. Cudo] gi|225852881|ref|YP_002733114.1| thymidylate synthase [Brucella melitensis ATCC 23457] gi|237815800|ref|ZP_04594797.1| thymidylate synthase [Brucella abortus str. 2308 A] gi|254689595|ref|ZP_05152849.1| thymidylate synthase [Brucella abortus bv. 6 str. 870] gi|254694085|ref|ZP_05155913.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya] gi|254697737|ref|ZP_05159565.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59] gi|254702121|ref|ZP_05163949.1| thymidylate synthase [Brucella suis bv. 5 str. 513] gi|254704658|ref|ZP_05166486.1| thymidylate synthase [Brucella suis bv. 3 str. 686] gi|254708073|ref|ZP_05169901.1| thymidylate synthase [Brucella pinnipedialis M163/99/10] gi|254710443|ref|ZP_05172254.1| thymidylate synthase [Brucella pinnipedialis B2/94] gi|254714436|ref|ZP_05176247.1| thymidylate synthase [Brucella ceti M644/93/1] gi|254717333|ref|ZP_05179144.1| thymidylate synthase [Brucella ceti M13/05/1] gi|254730626|ref|ZP_05189204.1| thymidylate synthase [Brucella abortus bv. 4 str. 292] gi|256031937|ref|ZP_05445551.1| thymidylate synthase [Brucella pinnipedialis M292/94/1] gi|256045031|ref|ZP_05447932.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1] gi|256061458|ref|ZP_05451602.1| thymidylate synthase [Brucella neotomae 5K33] gi|256113948|ref|ZP_05454736.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether] gi|256160135|ref|ZP_05457829.1| thymidylate synthase [Brucella ceti M490/95/1] gi|256255341|ref|ZP_05460877.1| thymidylate synthase [Brucella ceti B1/94] gi|256257844|ref|ZP_05463380.1| thymidylate synthase [Brucella abortus bv. 9 str. C68] gi|256263636|ref|ZP_05466168.1| thymidylate synthase [Brucella melitensis bv. 2 str. 63/9] gi|256369815|ref|YP_003107326.1| thymidylate synthase [Brucella microti CCM 4915] gi|260169073|ref|ZP_05755884.1| thymidylate synthase [Brucella sp. F5/99] gi|260546835|ref|ZP_05822574.1| thymidylate synthase [Brucella abortus NCTC 8038] gi|260565371|ref|ZP_05835855.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M] gi|260566096|ref|ZP_05836566.1| thymidylate synthase [Brucella suis bv. 4 str. 40] gi|260755122|ref|ZP_05867470.1| thymidylate synthase [Brucella abortus bv. 6 str. 870] gi|260758341|ref|ZP_05870689.1| thymidylate synthase [Brucella abortus bv. 4 str. 292] gi|260762167|ref|ZP_05874510.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59] gi|260884134|ref|ZP_05895748.1| thymidylate synthase [Brucella abortus bv. 9 str. C68] gi|261214383|ref|ZP_05928664.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya] gi|261219162|ref|ZP_05933443.1| thymidylate synthase [Brucella ceti M13/05/1] gi|261222542|ref|ZP_05936823.1| thymidylate synthase [Brucella ceti B1/94] gi|261315574|ref|ZP_05954771.1| thymidylate synthase [Brucella pinnipedialis M163/99/10] gi|261318013|ref|ZP_05957210.1| thymidylate synthase [Brucella pinnipedialis B2/94] gi|261322224|ref|ZP_05961421.1| thymidylate synthase [Brucella ceti M644/93/1] gi|261325464|ref|ZP_05964661.1| thymidylate synthase [Brucella neotomae 5K33] gi|261752691|ref|ZP_05996400.1| thymidylate synthase [Brucella suis bv. 5 str. 513] gi|261755351|ref|ZP_05999060.1| thymidylate synthase [Brucella suis bv. 3 str. 686] gi|261758577|ref|ZP_06002286.1| thymidylate synthase [Brucella sp. F5/99] gi|265989043|ref|ZP_06101600.1| thymidylate synthase [Brucella pinnipedialis M292/94/1] gi|265991458|ref|ZP_06104015.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1] gi|265995295|ref|ZP_06107852.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether] gi|265998507|ref|ZP_06111064.1| thymidylate synthase [Brucella ceti M490/95/1] gi|294852725|ref|ZP_06793398.1| thymidylate synthase [Brucella sp. NVSL 07-0026] gi|297248681|ref|ZP_06932399.1| thymidylate synthase [Brucella abortus bv. 5 str. B3196] gi|54039795|sp|P67043|TYSY_BRUSU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54042281|sp|P67042|TYSY_BRUME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|75505250|sp|Q57CA9|TYSY_BRUAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123727399|sp|Q2YS22|TYSY_BRUA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036929|sp|B0CHI7|TYSY_BRUSI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790231|sp|C0RE38|TYSY_BRUMB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|17982532|gb|AAL51789.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M] gi|23348244|gb|AAN30312.1| thymidylate synthase [Brucella suis 1330] gi|62196425|gb|AAX74725.1| ThyA, thymidylate synthase [Brucella abortus bv. 1 str. 9-941] gi|82616317|emb|CAJ11374.1| Thymidylate synthase [Brucella melitensis biovar Abortus 2308] gi|163674377|gb|ABY38488.1| Thymidylate synthase [Brucella suis ATCC 23445] gi|189020098|gb|ACD72820.1| Thymidylate synthase [Brucella abortus S19] gi|225617856|gb|EEH14901.1| thymidylate synthase [Brucella ceti str. Cudo] gi|225641246|gb|ACO01160.1| thymidylate synthase [Brucella melitensis ATCC 23457] gi|237789098|gb|EEP63309.1| thymidylate synthase [Brucella abortus str. 2308 A] gi|255999978|gb|ACU48377.1| thymidylate synthase [Brucella microti CCM 4915] gi|260095885|gb|EEW79762.1| thymidylate synthase [Brucella abortus NCTC 8038] gi|260151439|gb|EEW86533.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M] gi|260155614|gb|EEW90694.1| thymidylate synthase [Brucella suis bv. 4 str. 40] gi|260668659|gb|EEX55599.1| thymidylate synthase [Brucella abortus bv. 4 str. 292] gi|260672599|gb|EEX59420.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59] gi|260675230|gb|EEX62051.1| thymidylate synthase [Brucella abortus bv. 6 str. 870] gi|260873662|gb|EEX80731.1| thymidylate synthase [Brucella abortus bv. 9 str. C68] gi|260915990|gb|EEX82851.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya] gi|260921126|gb|EEX87779.1| thymidylate synthase [Brucella ceti B1/94] gi|260924251|gb|EEX90819.1| thymidylate synthase [Brucella ceti M13/05/1] gi|261294914|gb|EEX98410.1| thymidylate synthase [Brucella ceti M644/93/1] gi|261297236|gb|EEY00733.1| thymidylate synthase [Brucella pinnipedialis B2/94] gi|261301444|gb|EEY04941.1| thymidylate synthase [Brucella neotomae 5K33] gi|261304600|gb|EEY08097.1| thymidylate synthase [Brucella pinnipedialis M163/99/10] gi|261738561|gb|EEY26557.1| thymidylate synthase [Brucella sp. F5/99] gi|261742444|gb|EEY30370.1| thymidylate synthase [Brucella suis bv. 5 str. 513] gi|261745104|gb|EEY33030.1| thymidylate synthase [Brucella suis bv. 3 str. 686] gi|262553131|gb|EEZ08965.1| thymidylate synthase [Brucella ceti M490/95/1] gi|262766408|gb|EEZ12197.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether] gi|263002242|gb|EEZ14817.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1] gi|263093689|gb|EEZ17694.1| thymidylate synthase [Brucella melitensis bv. 2 str. 63/9] gi|264661240|gb|EEZ31501.1| thymidylate synthase [Brucella pinnipedialis M292/94/1] gi|294821314|gb|EFG38313.1| thymidylate synthase [Brucella sp. NVSL 07-0026] gi|297175850|gb|EFH35197.1| thymidylate synthase [Brucella abortus bv. 5 str. B3196] gi|326409422|gb|ADZ66487.1| Thymidylate synthase [Brucella melitensis M28] gi|326539129|gb|ADZ87344.1| thymidylate synthase [Brucella melitensis M5-90] Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 61 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264 >gi|224025685|ref|ZP_03644051.1| hypothetical protein BACCOPRO_02425 [Bacteroides coprophilus DSM 18228] gi|224018921|gb|EEF76919.1| hypothetical protein BACCOPRO_02425 [Bacteroides coprophilus DSM 18228] Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL + G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLHRIRTEGVRKDDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY+G IDQIS V+++R Sbjct: 61 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYEGGFIDQISEAVETIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNVA + M LPPCH FQFYV +G+LS Q+YQRS D FLG+PFNIAS Sbjct: 121 KNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVADGQLSLQMYQRSADSFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ DLQLSR PR LP+MI+NP++ ++ Sbjct: 181 YALLLQMMAQVTGLKPGDFIHTLGDAHIYLNHLEQVDLQLSREPRPLPRMILNPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y+P I KVSV Sbjct: 241 DFKYEDFQLEGYDPWPHIAGKVSV 264 >gi|209550125|ref|YP_002282042.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535881|gb|ACI55816.1| Thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 175/264 (66%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+ TTKK+H +S++HELL Sbjct: 1 MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLQEGFPVTTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGETNIGYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLGIPFNIAS Sbjct: 121 NNPNSRRHIVSAWNPAEVDQMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M INP++ D+ Sbjct: 181 YALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF ++DF L YE A+I A ++V Sbjct: 241 SFTFDDFELIGYEADASIKAPIAV 264 >gi|34541643|ref|NP_906122.1| thymidylate synthase [Porphyromonas gingivalis W83] gi|188995925|ref|YP_001930177.1| thymidylate synthase [Porphyromonas gingivalis ATCC 33277] gi|34397961|gb|AAQ67021.1| thymidylate synthase [Porphyromonas gingivalis W83] gi|188595605|dbj|BAG34580.1| thymidylate synthase [Porphyromonas gingivalis ATCC 33277] Length = 267 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR ++ G + DRTG GT S FG+QM FDL +GFPLLTTK++H KS+++ELL Sbjct: 4 MKQYLDLLRRILDEGVRKEDRTGTGTISVFGHQMCFDLEEGFPLLTTKRLHLKSIIYELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL HGV IW+EWAD++G+LGPIYG QWRSWPDY G IDQ+ +++ LR Sbjct: 64 WFLRGDTNVHYLQEHGVRIWNEWADENGDLGPIYGYQWRSWPDYRGGHIDQMQEVLRQLR 123 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV +WNV + M LPPCHC QFYV +G+LS QLYQRS D FLGIPFNIAS Sbjct: 124 EEPDSRRIIVCSWNVGQLADMHLPPCHCFMQFYVADGRLSLQLYQRSADSFLGIPFNIAS 183 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G F+HTLGD H+Y NH EQ LQLSR PR LP+M++NP + DL Sbjct: 184 YALLLQMIAHVTGLKPGRFVHTLGDAHIYLNHLEQVQLQLSREPRALPRMVLNPEVSDLF 243 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH I V+V Sbjct: 244 DFRYEDFRLEGYDPHPHIAGVVAV 267 >gi|46202071|ref|ZP_00053813.2| COG0207: Thymidylate synthase [Magnetospirillum magnetotacticum MS-1] Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR + G + DRTG GT S FG+QMRFDLS GFPL+TTKK+H +S+ ELL Sbjct: 1 MQQYLDLLRRIRAEGVTKTDRTGTGTTSVFGHQMRFDLSAGFPLVTTKKLHTRSIFVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL + VSIWDEWAD DG+LGP+YG QWRSW DG +DQI+ +V+ ++ Sbjct: 61 WFLRGDTNIRYLKDNKVSIWDEWADADGDLGPVYGKQWRSWACPDGRTVDQITQVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A I+ MALPPCHCLFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVAEGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G+F+HT GD HLY+NH EQA+LQLSR+P LP++ +NP++ DL Sbjct: 181 YALLTHMMAQVTGLEVGDFVHTFGDAHLYSNHMEQAELQLSRAPLALPRLELNPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D + Y+ HA I A V+V Sbjct: 241 AFTMDDIKVVDYQCHAHISAPVAV 264 >gi|62901348|sp|Q7MTB5|TYSY_PORGI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR ++ G + DRTG GT S FG+QM FDL +GFPLLTTK++H KS+++ELL Sbjct: 1 MKQYLDLLRRILDEGVRKEDRTGTGTISVFGHQMCFDLEEGFPLLTTKRLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL HGV IW+EWAD++G+LGPIYG QWRSWPDY G IDQ+ +++ LR Sbjct: 61 WFLRGDTNVHYLQEHGVRIWNEWADENGDLGPIYGYQWRSWPDYRGGHIDQMQEVLRQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV +WNV + M LPPCHC QFYV +G+LS QLYQRS D FLGIPFNIAS Sbjct: 121 EEPDSRRIIVCSWNVGQLADMHLPPCHCFMQFYVADGRLSLQLYQRSADSFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G F+HTLGD H+Y NH EQ LQLSR PR LP+M++NP + DL Sbjct: 181 YALLLQMIAHVTGLKPGRFVHTLGDAHIYLNHLEQVQLQLSREPRALPRMVLNPEVSDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH I V+V Sbjct: 241 DFRYEDFRLEGYDPHPHIAGVVAV 264 >gi|13471483|ref|NP_103049.1| thymidylate synthase [Mesorhizobium loti MAFF303099] gi|22096229|sp|Q98KH9|TYSY_RHILO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|14022225|dbj|BAB48835.1| thymidylate synthase [Mesorhizobium loti MAFF303099] Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV+ G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL Sbjct: 1 MRQYLDLLQHVLDNGADRSDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL HGV+IWDEWAD++G+LGP+YG QWRSWPD G IDQI+ +++ +R Sbjct: 61 WFLAGDTNIKYLTDHGVTIWDEWADENGDLGPVYGRQWRSWPDGHGGSIDQIAGLLKEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++ MALPPCHCLFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA QL R+PR LP M INP + DL Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLQRTPRALPTMWINPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L +Y A+I A ++V Sbjct: 241 AFRFEDFRLENYVADASIQAPIAV 264 >gi|9257014|pdb|1F4D|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase C146s, L143c Covalently Modified At C143 With N-[tosyl-D- Prolinyl]amino-Ethanethiol gi|9257015|pdb|1F4D|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase C146s, L143c Covalently Modified At C143 With N-[tosyl-D- Prolinyl]amino-Ethanethiol Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 150/263 (57%), Positives = 198/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMA P H FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMACAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|238796578|ref|ZP_04640085.1| Thymidylate synthase [Yersinia mollaretii ATCC 43969] gi|238719556|gb|EEQ11365.1| Thymidylate synthase [Yersinia mollaretii ATCC 43969] Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S++V+ L+ Sbjct: 61 WFLNGDTNIGYLKENSVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLIHMMAQQCDLEVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH I A +++ Sbjct: 241 DYHFDDFEIEGYDPHPGIKAPIAI 264 >gi|116252999|ref|YP_768837.1| thymidylate synthase [Rhizobium leguminosarum bv. viciae 3841] gi|122988452|sp|Q1ME82|TYSY_RHIL3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|115257647|emb|CAK08744.1| putative thymidylate synthase [Rhizobium leguminosarum bv. viciae 3841] Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 172/264 (65%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNI+S Sbjct: 121 NNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNISS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V+G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M I P++ D+ Sbjct: 181 YALLTMMVAQVVGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L YE A+I A ++V Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264 >gi|190892527|ref|YP_001979069.1| thymidylate synthase [Rhizobium etli CIAT 652] gi|190697806|gb|ACE91891.1| thymidylate synthase protein [Rhizobium etli CIAT 652] Length = 264 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MQQYLDLLKHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL HGVSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ + Sbjct: 61 WFLKGETNIGYLRDHGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWN A +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPNSRRHIVSAWNPAEVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HT GD HLY+NHF+QA LQL+R P+ LP M INP++ D+ Sbjct: 181 YALLTMMVAQVTGLKSGDFVHTFGDAHLYHNHFDQAKLQLTRRPKPLPFMRINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF +EDF L YE A I A ++V Sbjct: 241 SFTFEDFELIGYEADANIKAPIAV 264 >gi|189462550|ref|ZP_03011335.1| hypothetical protein BACCOP_03240 [Bacteroides coprocola DSM 17136] gi|189430711|gb|EDU99695.1| hypothetical protein BACCOP_03240 [Bacteroides coprocola DSM 17136] Length = 274 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ + G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 11 MKQYLDLLQRIRTEGVKKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWPDY+G IDQIS V++++ Sbjct: 71 WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYEGGFIDQISEAVETIK 130 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNVA + M LPPCH FQFYV NG+LS Q+YQRS D FLG+PFNIAS Sbjct: 131 HNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVANGRLSLQMYQRSADSFLGVPFNIAS 190 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHT+GD H+Y NH EQ DLQL+RSPR LPQM++NP++ ++ Sbjct: 191 YALLLQMMAQVTGLKAGDFIHTIGDAHIYLNHQEQVDLQLTRSPRPLPQMLLNPDVKNIF 250 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y+P I KVSV Sbjct: 251 DFKYEDFELVNYDPWPHIAGKVSV 274 >gi|220935909|ref|YP_002514808.1| Thymidylate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|254790255|sp|B8GN06|TYSY_THISH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219997219|gb|ACL73821.1| Thymidylate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 277 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 167/277 (60%), Positives = 207/277 (74%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+R +++ G+ + DRTG GTRS FG+QMRFDLSKGFPL+TTKK+H KS++HELL Sbjct: 1 MQPYLDLMRQLLEHGTVKSDRTGTGTRSLFGHQMRFDLSKGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL +GV IWDEWA +DGELGP+YG QWR+WP DG IDQIS +V+ +R Sbjct: 61 WFLKGETNIAYLKDNGVRIWDEWATEDGELGPVYGRQWRAWPTPDGRHIDQISQVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWNVA + MAL PCH FQFYV +G+LSCQLYQRS Sbjct: 121 TRPDSRRLIVSAWNVAELPDEGISPKDNARAGRMALAPCHTFFQFYVADGRLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLT+M+A V + G+F+HT GDVHLY+NH EQA QLSR P L Sbjct: 181 ADVFLGVPFNIASYALLTLMVAQVTDLEPGDFVHTFGDVHLYSNHVEQAKEQLSREPYPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP + L FRYEDFTL Y+ H I A V++ Sbjct: 241 PKMHLNPEVKSLFDFRYEDFTLEGYQAHPHIKAPVAI 277 >gi|312113785|ref|YP_004011381.1| thymidylate synthase [Rhodomicrobium vannielii ATCC 17100] gi|311218914|gb|ADP70282.1| thymidylate synthase [Rhodomicrobium vannielii ATCC 17100] Length = 264 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 168/264 (63%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR V G+ R DRTG GT S FG Q+RFDL GFPL+TTKK+H KS+VHELL Sbjct: 1 MQTYLDLLRDVRDHGTRRDDRTGTGTLSLFGRQLRFDLEAGFPLVTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +YL +GVSIWDEWAD +G+LGP+YG QWRSWP+ D IDQI+ +++++R Sbjct: 61 WFLAGDTNTAYLKANGVSIWDEWADANGDLGPVYGAQWRSWPERDCGTIDQIAEVIRAIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR +VSAWN A + +MAL PCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TDPNSRRLVVSAWNPADLPRMALAPCHCLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM A V G + G+F+HT GDVHLY NH EQAD QL R PR LP+M +NP + + Sbjct: 181 YALLTMMAAQVTGLRPGDFVHTFGDVHLYLNHREQADEQLGREPRPLPRMTLNPAVTSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y DF L Y PH AI A V+V Sbjct: 241 DFAYADFKLEGYAPHPAIKAPVAV 264 >gi|313203340|ref|YP_004041997.1| thymidylate synthase [Paludibacter propionicigenes WB4] gi|312442656|gb|ADQ79012.1| thymidylate synthase [Paludibacter propionicigenes WB4] Length = 264 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+DLL V+ G + DRTG GT S FG+QMRF++ GFP LTTKK+H KS++HELL Sbjct: 1 MKQYIDLLNRVLTEGVHKEDRTGTGTISVFGHQMRFNMEDGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IW+EWAD+ G LG IYG QWRSWPDY+G IDQI+ +V +++ Sbjct: 61 WFLNGDTNIKYLTDNGVRIWNEWADEQGNLGHIYGYQWRSWPDYNGGHIDQITEVVNAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I M LPPCH FQFYV NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRIIVSAWNVADIPNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+F+HTLGD H+Y NH EQ LQLSR PR LP M INP+I D+ Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHMEQVKLQLSREPRPLPTMKINPDIKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF + DF L Y+PH I V+V Sbjct: 241 SFSFSDFELIDYDPHPHIKGVVAV 264 >gi|254719433|ref|ZP_05181244.1| thymidylate synthase [Brucella sp. 83/13] gi|265984437|ref|ZP_06097172.1| thymidylate synthase [Brucella sp. 83/13] gi|306839209|ref|ZP_07472026.1| thymidylate synthase [Brucella sp. NF 2653] gi|306844297|ref|ZP_07476889.1| thymidylate synthase [Brucella sp. BO1] gi|264663029|gb|EEZ33290.1| thymidylate synthase [Brucella sp. 83/13] gi|306275369|gb|EFM57110.1| thymidylate synthase [Brucella sp. BO1] gi|306405756|gb|EFM62018.1| thymidylate synthase [Brucella sp. NF 2653] Length = 264 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 177/264 (67%), Positives = 220/264 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 61 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ANPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264 >gi|297583464|ref|YP_003699244.1| thymidylate synthase [Bacillus selenitireducens MLS10] gi|297141921|gb|ADH98678.1| thymidylate synthase [Bacillus selenitireducens MLS10] Length = 264 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L RHV++ G+ + DRTG GT STFGYQMRFDL GFP+LTTKK+ ++++HELL Sbjct: 1 MENYLNLCRHVLEHGTAKDDRTGTGTISTFGYQMRFDLQDGFPVLTTKKMALRAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++G++N+ YL H V IWDEWAD++G+LGP+YG QWRSWP DG IDQ+ ++++++ Sbjct: 61 WFIKGETNIRYLKEHNVRIWDEWADENGDLGPVYGRQWRSWPTPDGRTIDQLREVIEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRH+++AWNV +D+MAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPDSRRHVINAWNVGELDQMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLTMM+A G + GEFIHT GDVH+Y NH EQ LQL+R+P P+M +NP+ + Sbjct: 181 YSLLTMMVAQECGLEPGEFIHTFGDVHIYQNHLEQVRLQLTRTPGQKPEMRLNPDKKRIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F EDF L Y+PH AI +VSV Sbjct: 241 DFTIEDFELIGYDPHPAIKGEVSV 264 >gi|253576709|ref|ZP_04854036.1| thymidylate synthase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843919|gb|EES71940.1| thymidylate synthase [Paenibacillus sp. oral taxon 786 str. D14] Length = 264 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 158/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YLDLL V+K G+ + DRTGVGTRS FG Q+RFDLS+GFPL+TTK++H KSV+HELL Sbjct: 1 MRKYLDLLEDVLKNGTPKEDRTGVGTRSVFGRQLRFDLSEGFPLVTTKRIHLKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL HGV IWDEWAD++G+LGP+YG QWRSW DG IDQI+++V++++ Sbjct: 61 WFLRGDTNIAYLKEHGVRIWDEWADENGDLGPVYGSQWRSWEAPDGRKIDQIANVVEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRH+VSAWNVA +D+M LPPCH +FQFYV NGKLSC L RS D FLG+PFNIAS Sbjct: 121 KNPDSRRHLVSAWNVAEVDQMKLPPCHFVFQFYVANGKLSCMLTMRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GEFI + GDVH+YNNH EQ QL R P LP+++I + Sbjct: 181 YALLTHMIAQQCDLEVGEFIWSGGDVHIYNNHIEQVKTQLEREPYPLPKLVIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF Y+ H I A V+V Sbjct: 241 DYKYEDFEFIDYQYHPTIKATVAV 264 >gi|227538336|ref|ZP_03968385.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33300] gi|227241851|gb|EEI91866.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33300] Length = 273 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 165/273 (60%), Positives = 206/273 (75%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+HV G + DRTG GT+S FGYQMRF+L +GFPL+TTKK+H +S++HEL+ Sbjct: 1 MKQYLDLLKHVYTNGVTKTDRTGTGTKSVFGYQMRFNLKEGFPLVTTKKLHLRSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GVSIWDEWAD+ G LGP+YG QWRSWP G IDQI+ +++ L+ Sbjct: 61 WFLKGETNIQYLKENGVSIWDEWADEQGNLGPVYGSQWRSWPTPAGEHIDQIAQVIKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLYQRSGDVF 171 P SRR IVSAWNVA I+ MALPPCH FQFYV +LSCQLYQRS D+F Sbjct: 121 NTPDSRRIIVSAWNVAEIEHMALPPCHAFFQFYVAPAQPEAGIMKPQLSCQLYQRSADIF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V + EFIHTLGD H+Y+NHFEQ +LQLSR P+ LP+MI Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEAAEFIHTLGDAHIYSNHFEQTELQLSRDPKPLPKMI 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP++ D+ F++ DF L YE H I A V+V Sbjct: 241 INPDVRDIFDFKFGDFELVDYESHPHIKAPVAV 273 >gi|6686339|sp|P54081|TYSY2_BACAM RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2; AltName: Full=Thymidylate synthase B; Short=TS B; Short=TSase B Length = 264 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQGGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS ++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R R LP++ N+ + Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF + Y+PH I VSV Sbjct: 241 DFAFEDFIIEDYDPHPHIKGAVSV 264 >gi|297538294|ref|YP_003674063.1| thymidylate synthase [Methylotenera sp. 301] gi|297257641|gb|ADI29486.1| thymidylate synthase [Methylotenera sp. 301] Length = 264 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +LL HV+ G+ + DRTG GT S FGYQMRF+L +GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYTELLNHVLAHGNQKTDRTGTGTLSVFGYQMRFNLEEGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N++YL +GV IWDEWAD +G LGP+YG QWR+WP DG IDQI+ +V +++ Sbjct: 61 WFLQGSTNIAYLKENGVRIWDEWADDNGNLGPVYGYQWRNWPKPDGTHIDQITQVVNAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA +D+M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ QLSR R+LPQM INP + ++ Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYTNHMEQVHEQLSRDIRSLPQMHINPEVHNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +Y+PH AI V+V Sbjct: 241 DFKFEDFTLVNYDPHPAIKGLVAV 264 >gi|311068693|ref|YP_003973616.1| thymidylate synthase [Bacillus atrophaeus 1942] gi|310869210|gb|ADP32685.1| thymidylate synthase [Bacillus atrophaeus 1942] Length = 264 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 165/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLENGEIKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQI+ +V ++ Sbjct: 61 WFLKGETNVKYLQDNGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQITRLVHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVGEIDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ ++QL+R R LP++ + + Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHTEQVNMQLTRDVRPLPKLRFAREVDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF + Y+PH I VSV Sbjct: 241 DFTFDDFIVEDYDPHPHIKGAVSV 264 >gi|288801490|ref|ZP_06406942.1| thymidylate synthase [Prevotella sp. oral taxon 299 str. F0039] gi|288331571|gb|EFC70057.1| thymidylate synthase [Prevotella sp. oral taxon 299 str. F0039] Length = 264 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 174/264 (65%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H+I G+ + DRTG GT+S FGYQMRF+L GFPLLTTKK+H KS++HELL Sbjct: 1 MKAYLDLLQHIINNGATKGDRTGTGTKSVFGYQMRFNLEDGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSWP+Y G IDQI+ +V ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYKGGTIDQITQVVDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN A +D+MALPPCHCLFQFYV N KLS QLYQRS D FLG+PFNIAS Sbjct: 121 NNPNSRRMIVTAWNPAEVDEMALPPCHCLFQFYVANNKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLL MM+A V G++ GEF++T GD HLY NH EQA LQL R+PRTLP+M INP++ D+ Sbjct: 181 YSLLLMMVAQVTGYEPGEFVYTTGDTHLYLNHLEQAQLQLQRTPRTLPKMRINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDFTL Y P+ I A+VSV Sbjct: 241 SFKYEDFTLEDYNPYDHIKAQVSV 264 >gi|7766859|pdb|1EV5|A Chain A, Crystal Structure Analysis Of Ala167 Mutant Of Escherichia Coli Length = 264 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 200/263 (76%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRAXDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|224471861|sp|Q2W7P4|TYSY_MAGMM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 264 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 165/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQYLDLLR + G + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H +S+ ELL Sbjct: 1 MHQYLDLLRRIQAEGVTKTDRTGTGTTSVFGHQMRFDLSRGFPLVTTKKLHTRSIFVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L + VSIWDEWAD +G+LGP+YG QWRSW DG+ +DQI+ +V+ +R Sbjct: 61 WFLRGDTNIGWLKDNKVSIWDEWADANGDLGPVYGKQWRSWACPDGSTVDQITQVVEMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A I+ MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G F+HT GD HLY+NH EQA LQLSR+P LP++ +NP + DL Sbjct: 181 YALLTHMVAQVTGLEVGAFVHTFGDAHLYSNHMEQAALQLSRAPLPLPRLELNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D + Y+ HA I A V+V Sbjct: 241 AFTMDDIKVVDYQCHAHIAAPVAV 264 >gi|56477943|ref|YP_159532.1| thymidylate synthase [Aromatoleum aromaticum EbN1] gi|62901201|sp|Q5P233|TYSY_AZOSE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|56313986|emb|CAI08631.1| Thymidylate synthase [Aromatoleum aromaticum EbN1] Length = 264 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV+ G + DRTG GT S FG+QMRF+L GFPLLTTKK+H +S++HELL Sbjct: 1 MKQYLDLMRHVLDHGDRKSDRTGTGTLSIFGWQMRFNLDDGFPLLTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL+ +GVSIWD+WAD++G+LGP+YG QWR W +G IDQI+ ++ L+ Sbjct: 61 WFLRGDTNIRYLNENGVSIWDDWADENGDLGPVYGKQWRRWETANGATIDQIAQLIDGLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRH+VSAWN + MALPPCH LFQFYV +LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRHLVSAWNPGEVAGMALPPCHALFQFYVAGDRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + G+F+ T GD HLY NH +QA LQLSR PR LP+MI+NP + D+ Sbjct: 181 YALLTLMVAQVCGLRAGDFVWTGGDCHLYLNHLDQARLQLSRQPRALPRMIVNPGVTDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+EDF L Y+PH I A+V+V Sbjct: 241 GFRFEDFRLEGYDPHPHIKAEVAV 264 >gi|114319533|ref|YP_741216.1| thymidylate synthase [Alkalilimnicola ehrlichii MLHE-1] gi|122312527|sp|Q0ABR1|TYSY_ALHEH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|114225927|gb|ABI55726.1| thymidylate synthase [Alkalilimnicola ehrlichii MLHE-1] Length = 264 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 165/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+ HV G+ + DRTG GT S FG+QMRFDLS+GFP++TTKK+H +S++HELL Sbjct: 1 MQAYLDLMAHVRHHGTPKSDRTGTGTLSVFGHQMRFDLSRGFPVVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GDSN++YL +GVSIWDEWAD++G+LGPIYGVQWRSWP DG +DQ++ +++ LR Sbjct: 61 WFLSGDSNIAYLKANGVSIWDEWADENGDLGPIYGVQWRSWPTPDGRRVDQLAQVLRDLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRRH+VSAWNV + MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 EHPDSRRHLVSAWNVGELPNMALPPCHTLFQFYVAEGRLSCQLYQRSADIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + GEFI T GD HLY NH EQAD QL R P LP++ +NP + DL Sbjct: 181 YALLTHMVAQVCDLKPGEFIWTGGDCHLYTNHLEQADRQLQREPLPLPRLRLNPEVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYED L Y+ H I A V+V Sbjct: 241 AFRYEDIALEGYQHHPPIKAPVAV 264 >gi|319903078|ref|YP_004162806.1| thymidylate synthase [Bacteroides helcogenes P 36-108] gi|319418109|gb|ADV45220.1| thymidylate synthase [Bacteroides helcogenes P 36-108] Length = 264 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL Sbjct: 1 MKQYLDLLNRVLTEGAEKNDRTGTGTVSIFGHQMRFNMEEGFPCLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD++G+LG IYG QWRSWPDY G IDQIS V++++ Sbjct: 61 WFLKGDTNIKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ++ M LPPCH FQFYV NGKLS QLYQRS D+FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLNNMNLPPCHAFFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL +M+A V G Q G+FIHTLGD H+Y NH EQ LQL+R+P+ LP M INP++ ++ Sbjct: 181 YALLLLMMAQVTGLQAGDFIHTLGDAHIYLNHIEQVKLQLTRNPKPLPLMNINPDVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y PH I KV++ Sbjct: 241 DFKYEDFELVNYNPHPHIAGKVAI 264 >gi|51597348|ref|YP_071539.1| thymidylate synthase [Yersinia pseudotuberculosis IP 32953] gi|153947420|ref|YP_001399968.1| thymidylate synthase [Yersinia pseudotuberculosis IP 31758] gi|170023285|ref|YP_001719790.1| thymidylate synthase [Yersinia pseudotuberculosis YPIII] gi|186896455|ref|YP_001873567.1| thymidylate synthase [Yersinia pseudotuberculosis PB1/+] gi|62901276|sp|Q667F9|TYSY_YERPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166991232|sp|A7FFE0|TYSY_YERP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|51590630|emb|CAH22271.1| thymidylate synthase [Yersinia pseudotuberculosis IP 32953] gi|152958915|gb|ABS46376.1| thymidylate synthase [Yersinia pseudotuberculosis IP 31758] gi|169749819|gb|ACA67337.1| Thymidylate synthase [Yersinia pseudotuberculosis YPIII] gi|186699481|gb|ACC90110.1| thymidylate synthase [Yersinia pseudotuberculosis PB1/+] Length = 264 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 151/264 (57%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G+LGPIYG QWR+W DG IDQ+S++V L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGDLGPIYGKQWRAWGAADGRKIDQLSNVVNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH +Q LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQTHLQLSREPRALPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH I A +++ Sbjct: 241 DYHFDDFDIEGYDPHPGIKAPIAI 264 >gi|163753075|ref|ZP_02160199.1| Thymidylate synthase [Kordia algicida OT-1] gi|161326807|gb|EDP98132.1| Thymidylate synthase [Kordia algicida OT-1] Length = 274 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 158/277 (57%), Positives = 211/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS++HELL Sbjct: 1 MRQYLDLVKHVLEHGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL +GV IW+EWAD++G+LGP+YG QWR+W + IDQ+S ++++L+ Sbjct: 61 WFIKGDTNIKYLQENGVRIWNEWADENGDLGPVYGHQWRNW---NSESIDQLSEVIETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMMVSAWNPSVLPNTKVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLTMM+A V G++YG+FIHT GD H+Y+NHFEQ LQL+R P L Sbjct: 178 ADVFLGVPFNIASYALLTMMMAQVCGYEYGDFIHTFGDAHIYSNHFEQVKLQLTREPYPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP I + F +EDF L +Y+ H I V++ Sbjct: 238 PTMKINPEIKSIFDFTFEDFELVNYQHHPRIKGAVAI 274 >gi|312129644|ref|YP_003996984.1| thymidylate synthase [Leadbetterella byssophila DSM 17132] gi|311906190|gb|ADQ16631.1| thymidylate synthase [Leadbetterella byssophila DSM 17132] Length = 260 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 157/264 (59%), Positives = 205/264 (77%), Gaps = 4/264 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLRH++K G+ + DRTG GT S FGYQMRFDLSKGFPL+TTKK+H KS++HELL Sbjct: 1 MQQYQDLLRHILKEGTQKTDRTGTGTLSVFGYQMRFDLSKGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ GD+N+ YL +GVSIWDEWA+++G+LGP+YG QWR+W D IDQ+ ++ +++ Sbjct: 61 WFINGDTNIKYLKDNGVSIWDEWANENGDLGPVYGKQWRAWND----EIDQLKEVINTIK 116 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV+ + +MAL PCH LFQFYV + KLSCQLYQRS DVFLG+PFNIAS Sbjct: 117 HNPDSRRMIVSAWNVSDLPRMALMPCHALFQFYVADNKLSCQLYQRSADVFLGVPFNIAS 176 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G + G+F+ T GD HLY NH EQ + QL R+P+ LP M +NP++ + Sbjct: 177 YALLTMMIAQECGLELGDFVWTGGDTHLYLNHLEQVNKQLERTPKALPIMKLNPDVKSVF 236 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+P+ I A V+V Sbjct: 237 DFKFEDFELVNYDPYPGIKAPVAV 260 >gi|207743702|ref|YP_002260094.1| thymidylate synthase (ts) (tsase) protein [Ralstonia solanacearum IPO1609] gi|206595101|emb|CAQ62028.1| thymidylate synthase (ts) (tsase) protein [Ralstonia solanacearum IPO1609] Length = 276 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL Sbjct: 13 MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 72 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L +GV+IWDEWAD DGELGPIYG QWRSWP G IDQI+ ++ ++ Sbjct: 73 WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 132 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +M LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 133 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 192 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G+F+ T GD HLYNNHFEQ + QL+R+P LP++ I + Sbjct: 193 YALLTHMIAQQTSLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIF 252 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + Y+ HAAI A V+V Sbjct: 253 DYQFEDFEIVGYQSHAAIKAPVAV 276 >gi|255038746|ref|YP_003089367.1| thymidylate synthase [Dyadobacter fermentans DSM 18053] gi|254951502|gb|ACT96202.1| thymidylate synthase [Dyadobacter fermentans DSM 18053] Length = 273 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 167/273 (61%), Positives = 201/273 (73%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLRH++K G + DRTG GT S FGYQMRFDL KGFPL+TTKKVH KS++HELL Sbjct: 1 MQQYHDLLRHILKEGVRKTDRTGTGTISVFGYQMRFDLKKGFPLVTTKKVHTKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL H VSIWDEWAD++G+LGP+YG QWRSW DG +DQ+ +++ L+ Sbjct: 61 WFLQGDTNIGYLKEHNVSIWDEWADENGDLGPVYGKQWRSWAGPDGKSVDQLQEVLKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLYQRSGDVF 171 P SRR IVSAWN A + +M L PCH LFQFYV NGKLSCQLYQRS DVF Sbjct: 121 NSPDSRRIIVSAWNPAELPQMKLHPCHALFQFYVAPPDTGAGETNGKLSCQLYQRSADVF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A G+F+ T GD H+Y NH EQ + QLSR PR LPQMI Sbjct: 181 LGVPFNIASYALLTMMIARECDLDLGDFVWTGGDTHIYLNHLEQVETQLSREPRALPQMI 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +NP + ++L FRYEDF L +Y P I A V+V Sbjct: 241 LNPGVKNVLDFRYEDFELVNYNPWPGIKAPVAV 273 >gi|282881638|ref|ZP_06290301.1| thymidylate synthase [Prevotella timonensis CRIS 5C-B1] gi|281304397|gb|EFA96494.1| thymidylate synthase [Prevotella timonensis CRIS 5C-B1] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 165/264 (62%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+ ++ G ++ DRTG GT+S FG+QMRF++ GFPLLTTKK+H KS+++ELL Sbjct: 1 MQPYLNLLQRILDEGIEKTDRTGTGTKSIFGHQMRFNMEDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGV IWDEWAD+DG LGP+YG QWRSWPDY+G IDQI +++ ++ Sbjct: 61 WFLKGDTNIKYLKEHGVRIWDEWADEDGNLGPVYGHQWRSWPDYNGGTIDQIQNVINLIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +V+AWN A I++MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 121 HHPDSRRMMVTAWNPAEIEQMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G Q GEFIHT GD HLY NH EQA LQL+R+PRTLPQM +NP++ L Sbjct: 181 YALLLQMMAQVTGLQVGEFIHTTGDTHLYLNHIEQAKLQLTRTPRTLPQMKLNPDVKSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L++Y P I A V+V Sbjct: 241 DFQYEDFELQNYNPWPHIKADVAV 264 >gi|198276921|ref|ZP_03209452.1| hypothetical protein BACPLE_03126 [Bacteroides plebeius DSM 17135] gi|198270446|gb|EDY94716.1| hypothetical protein BACPLE_03126 [Bacteroides plebeius DSM 17135] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 165/264 (62%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL + G + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLHRIRTEGVRKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LG IYG QWRSWP YDG IDQIS V++++ Sbjct: 61 WFLQGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPGYDGKFIDQISEAVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ++ M LPPCH FQFYV NG+LS Q+YQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVSAWNVGDLNNMNLPPCHAFFQFYVANGRLSLQMYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + G+FIHTLGD H+Y NH EQ DLQL+R+PR LP M INP++ D+ Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVDLQLTRTPRPLPTMKINPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF YEDF L +Y+P I KVSV Sbjct: 241 SFHYEDFQLENYDPWPHIAGKVSV 264 >gi|325298388|ref|YP_004258305.1| Thymidylate synthase [Bacteroides salanitronis DSM 18170] gi|324317941|gb|ADY35832.1| Thymidylate synthase [Bacteroides salanitronis DSM 18170] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR + G + DRTG GT S FG+QMRF+L+ GFPL+TTKK+H KS++HELL Sbjct: 1 MKQYLDLLRRIRTEGVQKHDRTGTGTISIFGHQMRFNLADGFPLVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L GD+NV YL +GV IW+EWAD DG LG IYG QWRSWPDY+G VIDQI+ V+++R Sbjct: 61 WMLSGDTNVHYLQENGVRIWNEWADADGNLGHIYGYQWRSWPDYEGGVIDQIAEAVETIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWNVA + M LPPCH FQFYV +GKLS Q+YQRS D FLG+PFNIAS Sbjct: 121 HNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVADGKLSLQMYQRSADCFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHTLGD H+Y NH EQ DLQL+R PR LP+M +NP++ D+ Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTLGDAHIYLNHLEQVDLQLTREPRPLPKMRLNPDVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y P I KVSV Sbjct: 241 GFKYEDFELTDYNPWPHIAGKVSV 264 >gi|110634102|ref|YP_674310.1| thymidylate synthase [Mesorhizobium sp. BNC1] gi|122965941|sp|Q11HI0|TYSY_MESSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|110285086|gb|ABG63145.1| thymidylate synthase [Chelativorans sp. BNC1] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 172/264 (65%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ G DR DRTG GTR FGYQMRFDLS GFP+LTTKK+H +S+++ELL Sbjct: 1 MRQYLDLLAHVLENGIDREDRTGTGTRGVFGYQMRFDLSDGFPVLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI++++ LR Sbjct: 61 WFLKGDTNIRYLQENGVTIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIANLLNGLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +PYSRRHIV+AWN A ID MALPPCHCLFQF+V G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ENPYSRRHIVTAWNPAEIDGMALPPCHCLFQFHVAEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+F+HTLGD HLY NHF+QA QL+R+P+ LP M INP + DL Sbjct: 181 YALLTMMIAQVTGLKPGDFVHTLGDAHLYKNHFDQAREQLTRTPKPLPTMWINPEVDDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F YEDF L Y I A ++V Sbjct: 241 AFGYEDFRLEGYVADPTIRAPIAV 264 >gi|220913475|ref|YP_002488784.1| thymidylate synthase [Arthrobacter chlorophenolicus A6] gi|219860353|gb|ACL40695.1| Thymidylate synthase [Arthrobacter chlorophenolicus A6] Length = 267 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 155/261 (59%), Positives = 198/261 (75%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GT S FG Q+RFDL++GFPL+TTK+VH+KSV ELLWFL Sbjct: 7 YEDLLRDVLAQGTHKSDRTGTGTTSVFGRQIRFDLAEGFPLITTKRVHFKSVAVELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV ++ GV+IW+EWAD+DG+LGP+YGVQWRSWP DG IDQI+ +V++L+A+P Sbjct: 67 RGETNVKWMQDQGVTIWNEWADEDGDLGPVYGVQWRSWPTPDGGHIDQIAELVENLKANP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHIVSAWNV+ ++ MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRHIVSAWNVSELNDMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA +G + GEF+ T GDVH+Y NH +Q QL R P PQ+ IN + + Sbjct: 187 LTYMLAQQVGLEPGEFVWTGGDVHIYENHMDQVLKQLEREPYEYPQLKINRKPASIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 EDF + Y+ H I A ++V Sbjct: 247 LEDFEVVGYKHHPTIKAPIAV 267 >gi|148560322|ref|YP_001259294.1| thymidylate synthase [Brucella ovis ATCC 25840] gi|166231694|sp|A5VRE7|TYSY_BRUO2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148371579|gb|ABQ61558.1| thymidylate synthase [Brucella ovis ATCC 25840] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 219/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDHGVDRDDRTGTGTRSAFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 61 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264 >gi|194364440|ref|YP_002027050.1| thymidylate synthase [Stenotrophomonas maltophilia R551-3] gi|194347244|gb|ACF50367.1| Thymidylate synthase [Stenotrophomonas maltophilia R551-3] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKAYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD++G+LGP+YG QWRSW DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGGEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QLSR PR LP++ +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++D + Y+PH AI A V+V Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264 >gi|238783710|ref|ZP_04627730.1| Thymidylate synthase [Yersinia bercovieri ATCC 43970] gi|238715423|gb|EEQ07415.1| Thymidylate synthase [Yersinia bercovieri ATCC 43970] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S++V+ L+ Sbjct: 61 WFLNGDTNIGYLKENSVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP++II L Sbjct: 181 YALLIHMMAQQCDLDVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH I A +++ Sbjct: 241 DYHFDDFEIEGYDPHPGIKAPIAI 264 >gi|242240430|ref|YP_002988611.1| thymidylate synthase [Dickeya dadantii Ech703] gi|242132487|gb|ACS86789.1| thymidylate synthase [Dickeya dadantii Ech703] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 149/264 (56%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G LGP+YG QWR+W DG IDQ+ +++ L+ Sbjct: 61 WFLNGDTNIGYLRDNKVSIWDEWADENGNLGPVYGKQWRAWGAADGRQIDQLQTVLHQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQL R PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHLEQTRLQLGREPRPLPKLVIKRRPESLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF + Y+PH AI A V++ Sbjct: 241 DYQFDDFDIDGYDPHPAIKAPVAI 264 >gi|1359501|emb|CAA90532.1| thymidylate synthetase [Bacillus amyloliquefaciens] Length = 282 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L GFP+LTTKK+H+KS+ HELL Sbjct: 19 MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQGGFPMLTTKKLHFKSIAHELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS ++ ++ Sbjct: 79 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 138 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 139 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 198 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R R LP++ N+ + Sbjct: 199 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 258 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +EDF + Y+PH I VSV Sbjct: 259 DFAFEDFIIEDYDPHPHIKGAVSV 282 >gi|46203405|ref|ZP_00208952.1| COG0207: Thymidylate synthase [Magnetospirillum magnetotacticum MS-1] Length = 290 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 160/262 (61%), Positives = 200/262 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL ++ G + DRTG GT S FG+QMRFDL++GFPL+TTK++H +S++HELL Sbjct: 18 MRAYHDLLDRILTEGLRKDDRTGTGTLSVFGHQMRFDLAEGFPLVTTKQLHLRSIIHELL 77 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD DG LGP+YG QWRSW G +DQI+ ++ + Sbjct: 78 WFLQGDTNIAYLKENGVTIWDEWADADGNLGPVYGKQWRSWEKPSGGTVDQIAWVLGEIA 137 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 138 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 197 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G G+F+HTLGD HLY NH EQA LQLSR PR LP++ +NP + L Sbjct: 198 YALLTAMMAQVTGLAPGDFVHTLGDAHLYVNHLEQARLQLSREPRALPRLRLNPEVRSLF 257 Query: 241 SFRYEDFTLRSYEPHAAILAKV 262 FR+ED + Y+PH AI A V Sbjct: 258 DFRFEDIAIEGYDPHPAIKAPV 279 >gi|89100587|ref|ZP_01173446.1| thymidylate synthase [Bacillus sp. NRRL B-14911] gi|89084691|gb|EAR63833.1| thymidylate synthase [Bacillus sp. NRRL B-14911] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L RHV++ G+ + DRTG GT STFGYQMRFDL +GFPL+TTKK+H +S++HELL Sbjct: 1 MEQYLQLCRHVLEKGTIKEDRTGTGTISTFGYQMRFDLKEGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW+EWAD++G LGP+YG QWRSW DG +DQIS ++ S++ Sbjct: 61 WFLNGDTNVKYLQDNGVRIWNEWADEEGNLGPVYGHQWRSWTGADGKTVDQISELISSIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IV+AWNV+ I MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVNAWNVSEIGNMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + GEFIH+ GDVH+Y NH EQ +LQLSR P LPQ+ + D+ Sbjct: 181 YALLTHMVAHVCDLEPGEFIHSFGDVHIYRNHLEQVNLQLSREPFKLPQLKFARKVEDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDF L YE H I VSV Sbjct: 241 SFKYEDFILEGYESHPHIKGVVSV 264 >gi|16079241|ref|NP_390065.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168] gi|221310096|ref|ZP_03591943.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168] gi|221323615|ref|ZP_03604909.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. SMY] gi|136604|sp|P11044|TYSY2_BACSU RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2; AltName: Full=Thymidylate synthase B; Short=TS B; Short=TSase B gi|143741|gb|AAA22852.1| thymidylate synthase B (thyB) [Bacillus subtilis] gi|1256640|gb|AAA96634.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168] gi|2634602|emb|CAB14100.1| thymidylate synthase B [Bacillus subtilis subsp. subtilis str. 168] Length = 264 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDFCRHVLEHGEKKGDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTM++A V G + GEFIHT GDVH+Y NH EQ +LQL R R LPQ+ + + Sbjct: 181 YALLTMIIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLERDVRPLPQLRFARKVDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF + Y+PH I VSV Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264 >gi|162139863|ref|YP_412649.2| thymidylate synthase [Nitrosospira multiformis ATCC 25196] Length = 264 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H KS+++ELL Sbjct: 1 MRQYLDLMQHVLEHGQKKSDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ + VSIWDEWAD++G+LGPIYG QWRSWP+ G IDQI +V+ +R Sbjct: 61 WFLKGDTNIRYLNENDVSIWDEWADENGDLGPIYGRQWRSWPNGKGGHIDQIEQVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VS+WNV + +M L PCH LFQFYV KLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NTPDSRRMLVSSWNVGELQEMKLAPCHALFQFYVAEDKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+MLA + GEF+HT GD HLY NH EQA QL R P+ LP M +NP I ++ Sbjct: 181 YALLTLMLAQSCDLRAGEFVHTFGDAHLYLNHLEQAREQLERGPKKLPIMKLNPAIRNVF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH +I A ++V Sbjct: 241 DFRYEDFNLEGYDPHPSIKAPIAV 264 >gi|294054859|ref|YP_003548517.1| thymidylate synthase [Coraliomargarita akajimensis DSM 45221] gi|293614192|gb|ADE54347.1| thymidylate synthase [Coraliomargarita akajimensis DSM 45221] Length = 264 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR V++ G+ R DRTG GT S FG Q RF LS FPLLTTKK+H +S++HELL Sbjct: 1 MKSYLDLLRTVLETGTFRDDRTGTGTYSIFGAQARFSLSPDFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++G++N+ YL + V IWDEWAD++G+LG +YG QWR W +G +DQ++ ++ +++ Sbjct: 61 WFIQGNTNIQYLKDNKVRIWDEWADENGDLGRVYGAQWRDWAAPNGEHVDQLADVIDAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIV AWN I MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPDSRRHIVCAWNPGEIKHMALPPCHALFQFYVADGELSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + EF+HT GD+HLY NH +QA QLSR PR LPQM +NP++ + Sbjct: 181 YALLTMMIAQVCNLKPKEFVHTFGDLHLYANHVDQAKEQLSREPRALPQMKLNPDVHSIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L +Y+PH I A ++V Sbjct: 241 DFKFEDFELVNYDPHPTIKAPIAV 264 >gi|83648497|ref|YP_436932.1| thymidylate synthase [Hahella chejuensis KCTC 2396] gi|123753522|sp|Q2SA17|TYSY_HAHCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|83636540|gb|ABC32507.1| Thymidylate synthase [Hahella chejuensis KCTC 2396] Length = 264 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 158/264 (59%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++RHV + G+ + DRTG GTRS FGYQMRFDL +GFPL+TTKK+H +S+++ELL Sbjct: 1 MKQYLDMMRHVREQGAVKTDRTGTGTRSVFGYQMRFDLQQGFPLVTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD+ G+LGP+YG QWRSWP +G IDQIS+++ ++ Sbjct: 61 WFLNGDTNIKYLKDNGVSIWDEWADESGDLGPVYGYQWRSWPAPNGEHIDQISNVLAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRH+V A+N A +D+MALPPCH +FQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRHMVVAYNPAFVDQMALPPCHAMFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M A G+FI T GDVHLYNNH +QA QL R PR LPQ+ I L Sbjct: 181 YALLTHMFAQQCDLDVGDFIWTGGDVHLYNNHLDQAKEQLDREPRPLPQLQIRRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+PH I A V+V Sbjct: 241 DYEFEDFEITGYDPHPHIKAPVAV 264 >gi|319899133|ref|YP_004159226.1| Thymidylate synthase [Bartonella clarridgeiae 73] gi|319403097|emb|CBI76655.1| Thymidylate synthase [Bartonella clarridgeiae 73] Length = 264 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 180/264 (68%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+K G DR DRTGVGTRS FGYQMRF+L GFPLLTTKK+H +S+++ELL Sbjct: 1 MKAYLDLLFHVLKNGIDRLDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADK+G+LGPIYG QWRSWP DG IDQIS+++ ++ Sbjct: 61 WFLKGDTNIAWLKEHGVSIWDEWADKEGDLGPIYGYQWRSWPAPDGRHIDQISNLLTMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALID+MALPPCHCLFQFYV GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHCLFQFYVAAGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A + Q G+FIHT GD HLY NHFEQA+ QLSR+P LP M+INP + DL Sbjct: 181 YALLTMMIAQITNLQVGDFIHTFGDAHLYLNHFEQAEQQLSRTPSALPLMLINPAVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF +EDF L +YE I A V+V Sbjct: 241 SFTFEDFELLNYEALPHIKAPVAV 264 >gi|221314417|ref|ZP_03596222.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319340|ref|ZP_03600634.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. JH642] Length = 267 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 4 MKQYKDFCRHVLEHGEKKGDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 64 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 123 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 124 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 183 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTM++A V G + GEFIHT GDVH+Y NH EQ +LQL R R LPQ+ + + Sbjct: 184 YALLTMIIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLERDVRPLPQLRFARKVDSIF 243 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF + Y+PH I VSV Sbjct: 244 NFAFEDFIIEDYDPHPHIKGAVSV 267 >gi|22127047|ref|NP_670470.1| thymidylate synthase [Yersinia pestis KIM 10] gi|45442641|ref|NP_994180.1| thymidylate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108806482|ref|YP_650398.1| thymidylate synthase [Yersinia pestis Antiqua] gi|108813148|ref|YP_648915.1| thymidylate synthase [Yersinia pestis Nepal516] gi|145598984|ref|YP_001163060.1| thymidylate synthase [Yersinia pestis Pestoides F] gi|150260199|ref|ZP_01916927.1| thymidylate synthase [Yersinia pestis CA88-4125] gi|162419494|ref|YP_001607589.1| thymidylate synthase [Yersinia pestis Angola] gi|165924834|ref|ZP_02220666.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939038|ref|ZP_02227590.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|166010315|ref|ZP_02231213.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212711|ref|ZP_02238746.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|167399795|ref|ZP_02305313.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418797|ref|ZP_02310550.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425231|ref|ZP_02316984.1| thymidylate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470394|ref|ZP_02335098.1| thymidylate synthase [Yersinia pestis FV-1] gi|218927963|ref|YP_002345838.1| thymidylate synthase [Yersinia pestis CO92] gi|229837721|ref|ZP_04457881.1| thymidylate synthetase [Yersinia pestis Pestoides A] gi|229840685|ref|ZP_04460844.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842759|ref|ZP_04462913.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229903591|ref|ZP_04518704.1| thymidylate synthetase [Yersinia pestis Nepal516] gi|270487374|ref|ZP_06204448.1| thymidylate synthase [Yersinia pestis KIM D27] gi|294503029|ref|YP_003567091.1| thymidylate synthase [Yersinia pestis Z176003] gi|20455349|sp|Q8ZHV1|TYSY_YERPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|122979996|sp|Q1CFB5|TYSY_YERPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123245978|sp|Q1CAR9|TYSY_YERPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231745|sp|A4TLC5|TYSY_YERPP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|21960098|gb|AAM86721.1|AE013918_5 thymidylate synthetase [Yersinia pestis KIM 10] gi|45437506|gb|AAS63057.1| thymidylate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108776796|gb|ABG19315.1| thymidylate synthase [Yersinia pestis Nepal516] gi|108778395|gb|ABG12453.1| thymidylate synthase [Yersinia pestis Antiqua] gi|115346574|emb|CAL19455.1| thymidylate synthase [Yersinia pestis CO92] gi|145210680|gb|ABP40087.1| thymidylate synthase [Yersinia pestis Pestoides F] gi|149289607|gb|EDM39684.1| thymidylate synthase [Yersinia pestis CA88-4125] gi|162352309|gb|ABX86257.1| thymidylate synthase [Yersinia pestis Angola] gi|165912994|gb|EDR31619.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|165923034|gb|EDR40185.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990801|gb|EDR43102.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166206003|gb|EDR50483.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962791|gb|EDR58812.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050503|gb|EDR61911.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055631|gb|EDR65415.1| thymidylate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679361|gb|EEO75464.1| thymidylate synthetase [Yersinia pestis Nepal516] gi|229690239|gb|EEO82294.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229697051|gb|EEO87098.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704098|gb|EEO91110.1| thymidylate synthetase [Yersinia pestis Pestoides A] gi|262361065|gb|ACY57786.1| thymidylate synthase [Yersinia pestis D106004] gi|262365008|gb|ACY61565.1| thymidylate synthase [Yersinia pestis D182038] gi|270335878|gb|EFA46655.1| thymidylate synthase [Yersinia pestis KIM D27] gi|294353488|gb|ADE63829.1| thymidylate synthase [Yersinia pestis Z176003] gi|320014147|gb|ADV97718.1| thymidylate synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 264 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL + VSIWDEWAD++G+LGPIYG QWR+W DG IDQ+S++V L+ Sbjct: 61 WFLNGDTNIAYLKENNVSIWDEWADENGDLGPIYGKQWRAWGAADGRKIDQLSNVVNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH +QA LQLSR PR LP+++I L Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQAHLQLSREPRVLPKLVIKRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF + Y+PH I A +++ Sbjct: 241 DYHFDDFDIEGYDPHPGIKAPIAI 264 >gi|321311648|ref|YP_004203935.1| thymidylate synthase [Bacillus subtilis BSn5] gi|320017922|gb|ADV92908.1| thymidylate synthase [Bacillus subtilis BSn5] Length = 267 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL Sbjct: 4 MKQYKDLCRHVLEHGEKKEDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 64 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 123 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 124 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 183 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL R R LPQ+ + + Sbjct: 184 YALLTMMIAHVTGLESGEFIHTFGDVHIYQNHIEQINLQLERDVRPLPQLRFARKVDSIF 243 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF + Y+PH I VSV Sbjct: 244 NFAFEDFIIEDYDPHPHIKGAVSV 267 >gi|190572858|ref|YP_001970703.1| thymidylate synthase [Stenotrophomonas maltophilia K279a] gi|190010780|emb|CAQ44389.1| putative thymidylate synthase [Stenotrophomonas maltophilia K279a] Length = 264 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKAYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD++G+LGP+YG QWRSW DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGREIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QLSR PR LP++ +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++D + Y+PH AI A V+V Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264 >gi|258652990|ref|YP_003202146.1| thymidylate synthase [Nakamurella multipartita DSM 44233] gi|258556215|gb|ACV79157.1| thymidylate synthase [Nakamurella multipartita DSM 44233] Length = 264 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 214/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ ++ G+ + DRTG GTRS FG+QMRFDLS GFPL+TTKKVH +SV+ ELL Sbjct: 1 MQQYLDLMDRILTTGAVKSDRTGTGTRSIFGHQMRFDLSAGFPLVTTKKVHTRSVIVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +NV +L GV+IWDEWAD DGELGP+YG QWRSWP DG IDQI+ +V+SLR Sbjct: 61 WFLQGSTNVHWLQERGVTIWDEWADADGELGPVYGHQWRSWPAPDGRHIDQIAGLVRSLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRRHIVSAWNVA +D+MALPPCH +FQFYV +G LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRHIVSAWNVAEVDQMALPPCHTMFQFYVADGALSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V+G + GEFIHTLGD HLY NH +QA LQL+R+PR LP++ + P++ ++ Sbjct: 181 YALLTGMMAQVVGLRPGEFIHTLGDAHLYANHLDQARLQLTRAPRPLPELELKPDVTEID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D +R+Y+PH AI A ++V Sbjct: 241 AFTVDDIVIRNYDPHPAIKAPIAV 264 >gi|196249232|ref|ZP_03147931.1| Thymidylate synthase [Geobacillus sp. G11MC16] gi|196211461|gb|EDY06221.1| Thymidylate synthase [Geobacillus sp. G11MC16] Length = 284 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 150/264 (56%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 + QYL LL +++ G ++ DRTGVGT S FG Q+RF+L GFPL+TTKK+H +S+++ELL Sbjct: 21 LRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 80 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV+IWDEWAD++G+LGP+YG QWRSW DG +DQI+S+V+ ++ Sbjct: 81 WFLKGDTNVRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQIASVVEEIK 140 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWNVA +DKM LPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 141 RNPNSRRLLVNAWNVAELDKMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 200 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G GE I T GDVHLY NH EQA LQL+R PR LP++++ + Sbjct: 201 YALLTHMIAEQCGLDVGELIFTGGDVHLYKNHIEQAKLQLTREPRPLPKLVLKRKPSSIF 260 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF + Y+PH I A V+V Sbjct: 261 DYEYDDFEIVGYDPHPTIKAPVAV 284 >gi|161619346|ref|YP_001593233.1| thymidylate synthase [Brucella canis ATCC 23365] gi|189036928|sp|A9M657|TYSY_BRUC2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|161336157|gb|ABX62462.1| Thymidylate synthase [Brucella canis ATCC 23365] Length = 264 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 175/264 (66%), Positives = 218/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV+ G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV+IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++++ L Sbjct: 61 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPQSRSLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+EDF L YE I A ++V Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264 >gi|297564578|ref|YP_003683550.1| thymidylate synthase [Meiothermus silvanus DSM 9946] gi|296849027|gb|ADH62042.1| thymidylate synthase [Meiothermus silvanus DSM 9946] Length = 264 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y +L+R+V++ G + DRTGVGTRS FGYQMRFDL +GFPL+TTKKVHWKSVV+ELL Sbjct: 1 MQAYHELMRYVLEHGVPKSDRTGVGTRSIFGYQMRFDLQEGFPLVTTKKVHWKSVVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL HGVSIWDEWAD+ GELGPIYG QWRSW G +DQI+ ++Q +R Sbjct: 61 WFLRGDTNIRYLKEHGVSIWDEWADESGELGPIYGKQWRSWEGPGGKTVDQIAWVLQEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + KMAL PCH LFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 RNPDSRRMVVSAWNVADLPKMALAPCHTLFQFYVSGGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEFIHTLGD HLYNNH EQA +QL+R PR LP + +NP + DL Sbjct: 181 YALLTLMIAHVSGLEPGEFIHTLGDAHLYNNHLEQARIQLAREPRPLPTVRLNPGLRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYED L Y PH I A V+V Sbjct: 241 AFRYEDIVLEGYHPHPPIPAPVAV 264 >gi|85059955|ref|YP_455657.1| thymidylate synthase [Sodalis glossinidius str. 'morsitans'] gi|123738935|sp|Q2NRH3|TYSY_SODGM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|84780475|dbj|BAE75252.1| thymidylate synthase [Sodalis glossinidius str. 'morsitans'] Length = 264 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V G+ + DRTG GT S FG+QMRFDL +GF L+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMRRVRAQGTPKADRTGTGTLSIFGHQMRFDLRQGFLLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL ++ VSIWDEWAD +G+LGP+YG QWR+W DG IDQ++ +V+ L+ Sbjct: 61 WFLNGDTNIAYLQQNNVSIWDEWADDNGDLGPVYGRQWRAWGTSDGRQIDQLAEVVRQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH LFQFYV NG LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHALFQFYVANGTLSCQLYQRSCDIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MLA Q G+F+ T GD HLY+NH +QADLQL+R P LPQ++I L Sbjct: 181 YALLVHMLAQQCDLQVGDFVWTGGDTHLYSNHLQQADLQLTRDPLPLPQLLIKRRPATLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF L Y+PH AI A V+V Sbjct: 241 DYRFEDFELTGYDPHPAIKAPVAV 264 >gi|160900402|ref|YP_001565984.1| thymidylate synthase [Delftia acidovorans SPH-1] gi|160365986|gb|ABX37599.1| Thymidylate synthase [Delftia acidovorans SPH-1] Length = 274 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 156/262 (59%), Positives = 194/262 (74%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV + G + DRTG GTRS FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF Sbjct: 13 QYEDFMRHVYEHGVSKTDRTGTGTRSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 72 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L G +IW+EWA +DG+LGP+YGVQWR+WP DG IDQI+ +V+ L+++ Sbjct: 73 LRGDSNVRWLQERGCTIWNEWAREDGDLGPVYGVQWRNWPTPDGGHIDQIAEVVKQLKSN 132 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA + +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 133 PDSRRIIVSAWNVADLPQMALMPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIASYA 192 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT MLA Q G+F+ T GD H+YNNHF Q + QL+R P P + I + + Sbjct: 193 LLTHMLAQQCDLQVGDFVWTGGDCHIYNNHFAQVETQLARQPFAYPTLQIKRRPDSIFGY 252 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YEDF + Y+ H I A V+V Sbjct: 253 EYEDFEVVGYQHHEPIKAPVAV 274 >gi|261855508|ref|YP_003262791.1| thymidylate synthase [Halothiobacillus neapolitanus c2] gi|261835977|gb|ACX95744.1| thymidylate synthase [Halothiobacillus neapolitanus c2] Length = 264 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ V++ G DR DRTG GTRS FGYQMRFDL GFP LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLQKVMEQGVDRGDRTGTGTRSLFGYQMRFDLEAGFPALTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL +GV IWDEWAD +G LGP+YG QWRSW DG IDQ+S ++ ++ Sbjct: 61 WFIQGDTNIRYLQENGVRIWDEWADAEGNLGPVYGKQWRSWATPDGRTIDQLSQVIHDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IV+AWN A + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TTPESRRLIVTAWNPADVPNMALPPCHLLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT+M+A V G + GEF+HTLGD H+Y+NHFEQA QL R+P LP M INP + Sbjct: 181 YALLTLMIAQVTGLKPGEFVHTLGDAHIYHNHFEQARTQLERTPGKLPTMKINPERRSIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF ++DF L Y P I A V+V Sbjct: 241 SFVFDDFVLEDYAPLPHIAAPVAV 264 >gi|296329488|ref|ZP_06871975.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674812|ref|YP_003866484.1| thymidylate synthase B [Bacillus subtilis subsp. spizizenii str. W23] gi|317412155|sp|E0U0H8|TYSY2_BACPZ RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2; AltName: Full=Thymidylate synthase B; Short=TS B; Short=TSase B gi|296153370|gb|EFG94232.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413056|gb|ADM38175.1| thymidylate synthase B [Bacillus subtilis subsp. spizizenii str. W23] Length = 264 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLEHGEKKGDRTGTGTISTFGYQMRFHLQEGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL+R R LP++ I + Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLTRDVRPLPKLRFAREIDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF + Y+PH I VSV Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264 >gi|90019999|ref|YP_525826.1| thymidylate synthase [Saccharophagus degradans 2-40] gi|122996594|sp|Q21NW5|TYSY_SACD2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|89949599|gb|ABD79614.1| thymidylate synthase [Saccharophagus degradans 2-40] Length = 277 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 163/277 (58%), Positives = 204/277 (73%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV G+ + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL Sbjct: 1 MKQYLDLMRHVRDTGTKKEDRTGTGTVSVFGYQMRFDLSEGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N YL +GV IW+EWA ++G+LGP+YG QWRSWP DG +DQ + +V+ ++ Sbjct: 61 WFLKGETNTQYLTDNGVRIWNEWATEEGDLGPVYGAQWRSWPTPDGGSLDQFALLVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRRHI+SAWN AL+ KMALPPCH LFQFYV + KLSCQLYQRS Sbjct: 121 NKPDSRRHIISAWNPALLPDEGVSPQDNVRNGKMALPPCHTLFQFYVADNKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G + G+F+HT GD HLY NH EQ + QL+R P L Sbjct: 181 ADIFLGVPFNIASYALLTMMVAQVTGLELGDFVHTFGDAHLYLNHLEQVETQLAREPLPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP + D+ SF++EDF L Y+ H I A +S+ Sbjct: 241 PTMKINPEVKDIFSFKFEDFELVDYQAHPHISAPISI 277 >gi|170750914|ref|YP_001757174.1| thymidylate synthase [Methylobacterium radiotolerans JCM 2831] gi|170657436|gb|ACB26491.1| Thymidylate synthase [Methylobacterium radiotolerans JCM 2831] Length = 264 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLR ++ G + DRTG GT S FG+QMRFDLS GFPL+TTK++H +S++HELL Sbjct: 1 MDAYHDLLRRILDEGVAKDDRTGTGTLSVFGHQMRFDLSAGFPLVTTKRLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+ L +GV+IWDEWAD +G+LGP+YG QWRSW G +DQI+ ++ +R Sbjct: 61 WFLAGDTNVAALRANGVTIWDEWADANGDLGPVYGRQWRSWERPGGGTVDQIAWVLDEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D+MAL PCHCLFQFYV G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVSEGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G G F+HT GD HLY NH EQ L RSPR LPQ+ +NP + DL Sbjct: 181 YALLTHMIAQVTGLGVGAFVHTFGDAHLYRNHLEQTRTLLGRSPRPLPQLRLNPEVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + +Y+PH AI A V+V Sbjct: 241 AFRFEDIAIENYDPHPAIAAPVAV 264 >gi|254522948|ref|ZP_05135003.1| thymidylate synthase [Stenotrophomonas sp. SKA14] gi|219720539|gb|EED39064.1| thymidylate synthase [Stenotrophomonas sp. SKA14] Length = 264 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD++G+LGP+YG QWRSW DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGGAIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QLSR PR LP++ +NP++ DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPDVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++D + Y+PH AI A V+V Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264 >gi|323344523|ref|ZP_08084748.1| thymidylate synthase [Prevotella oralis ATCC 33269] gi|323094650|gb|EFZ37226.1| thymidylate synthase [Prevotella oralis ATCC 33269] Length = 264 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 170/264 (64%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++K G + DRTG GT S FG QMRF+L +GFPLLTTKK+H KS+++ELL Sbjct: 1 MRQYLDLLDRILKEGVKKGDRTGTGTISIFGNQMRFNLEEGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV +L HGV IW+EWAD++G+LGP+YG QWRSWPDY G IDQI +++ +R Sbjct: 61 WFLKGDTNVRFLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLNQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A +D MALPPCHCLFQFYV NG+LS QLYQRS D FLG+PFNIAS Sbjct: 121 QHPDSRRMIVSAWNPAEVDDMALPPCHCLFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM+A V G + G+FIHT GD HLY NH EQA LQLSR+PR LP+M++NP++ DL Sbjct: 181 YALLLMMMAQVTGLKAGDFIHTTGDTHLYLNHLEQAKLQLSRTPRALPKMLLNPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF L+ Y+P I A+VSV Sbjct: 241 AFHFEDFELKDYDPLPHISAQVSV 264 >gi|308069291|ref|YP_003870896.1| thymidylate synthase (TS) (TSase) [Paenibacillus polymyxa E681] gi|305858570|gb|ADM70358.1| Thymidylate synthase (TS) (TSase) [Paenibacillus polymyxa E681] Length = 264 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL +++ G + DRTG GT S FG Q+RFDL+KGFPL+TTK+VH KSV+HELL Sbjct: 1 MRNYLELLEDILENGVKKEDRTGTGTLSVFGRQLRFDLAKGFPLVTTKRVHLKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD+ G LGP+YG QWRSW DG IDQI++++++++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADEQGNLGPVYGSQWRSWETTDGQHIDQIANVIEAIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA I+ M LPPCH +FQFYV GKLSC L RS D FLG+PFNIAS Sbjct: 121 NNPDSRRHIVSAWNVAEIESMKLPPCHFVFQFYVAGGKLSCMLTMRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + GEFI + GDVH+Y+NH +Q QL R P LPQ+ I + Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHMQQVHTQLERDPYPLPQLKILRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF +YE H I A V++ Sbjct: 241 DYTYDDFAFENYEYHPGIKAPVAI 264 >gi|120434655|ref|YP_956876.1| thymidylate synthase [Gramella forsetii KT0803] gi|166231704|sp|A0LY29|TYSY_GRAFK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|117576805|emb|CAL65274.1| thymidylate synthase [Gramella forsetii KT0803] Length = 274 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 165/277 (59%), Positives = 212/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLLKHVLEQGAQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD +G+LGP+YG QWR+W +G IDQI IV SL+ Sbjct: 61 WFLKGDTNIEYLKENGVRIWNEWADDNGDLGPVYGHQWRNW---NGEEIDQIKEIVHSLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 HNPNSRRMLVSAWNPSVLPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQVELQLSREPRQL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP + D+ F++EDFTL Y+PH I AKV++ Sbjct: 238 PIMKINPEVKDIFDFKFEDFTLEDYDPHPGIKAKVAI 274 >gi|88855422|ref|ZP_01130086.1| thymidylate synthase [marine actinobacterium PHSC20C1] gi|88815329|gb|EAR25187.1| thymidylate synthase [marine actinobacterium PHSC20C1] Length = 280 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 153/261 (58%), Positives = 195/261 (74%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR + G + DRTG GTRS FG Q+RF+L++GFPL+TTK+VH+KS+ +ELLWFL Sbjct: 20 YEDLLRDTLANGVHKSDRTGTGTRSVFGRQLRFNLAEGFPLITTKRVHFKSIAYELLWFL 79 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNVS+L +GV+IW+EWAD+DGELGP+YGVQWRSWP G IDQIS ++ ++ +P Sbjct: 80 RGESNVSWLRDNGVTIWNEWADEDGELGPVYGVQWRSWPTPSGEQIDQISEVIDQIKTNP 139 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWN A I +MAL PCH FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 140 DSRRLIVSAWNPADIPQMALAPCHAFFQFYVANGKLSCQLYQRSADLFLGVPFNIASYAL 199 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G + G+F+ T GD H+Y+NH EQ QL+R P P++ I+ + + Sbjct: 200 LTHMVAEQTGLEVGDFVWTGGDCHIYDNHIEQVTEQLTREPFGPPRLAISSTPDSVFGYA 259 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +EDF + YE H AI A V+V Sbjct: 260 FEDFEIVDYEHHPAIKAPVAV 280 >gi|311940|emb|CAA49350.1| thymidylate synthase B [Bacillus subtilis] gi|448267|prf||1916395A thymidylate synthase B Length = 264 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL RHV++ G + DRTG GT STFGYQMRF L +GFP+LTTKK+H+KS+ HELL Sbjct: 1 MKQYKDLCRHVLEHGEKKGDRTGTGTISTFGYQMRFHLQEGFPMLTTKKLHFKSIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++GELGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 61 WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL+R R LP++ I + Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLTRDLRPLPKLRFAREIDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +EDF + Y+PH I VSV Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264 >gi|319944036|ref|ZP_08018316.1| thymidylate synthase [Lautropia mirabilis ATCC 51599] gi|319742797|gb|EFV95204.1| thymidylate synthase [Lautropia mirabilis ATCC 51599] Length = 264 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 158/264 (59%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G + DRTG GT S FG+QMRF L+ GFPLLTTKK+H +S++HELL Sbjct: 1 MKTYLDLLDHVLTHGVRKEDRTGTGTLSVFGHQMRFPLADGFPLLTTKKLHTRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD +G LGP+YG QWRSWP DG IDQIS +V+ +R Sbjct: 61 WFLKGDTNIGYLRDNGVTIWDEWADAEGNLGPVYGAQWRSWPTPDGQHIDQISRVVEDIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV + MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RSPDSRRLIVSAWNVGELPHMALPPCHALFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GEFI T GD HLY NH +QA LQLSR+PR LP++ + + Sbjct: 181 YALLTHMVAQQTDLEPGEFIWTGGDCHLYLNHLDQARLQLSRTPRALPRLKLARRPESIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+P I A ++V Sbjct: 241 DYRFEDFVIEDYDPWPGIKAPIAV 264 >gi|254447388|ref|ZP_05060854.1| thymidylate synthase [gamma proteobacterium HTCC5015] gi|198262731|gb|EDY87010.1| thymidylate synthase [gamma proteobacterium HTCC5015] Length = 277 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 156/277 (56%), Positives = 205/277 (74%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G + DRTG GT S FG+QMRFDLS+GFP++TTKK+H +S+VHELL Sbjct: 1 MKQYLELMQRVLDEGVRKDDRTGTGTLSVFGHQMRFDLSQGFPMVTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL +GVSIWDEWA ++G+LGP+YG QWRSW +G V+DQI ++ ++ Sbjct: 61 WFLKGETNIAYLKDNGVSIWDEWATEEGDLGPVYGKQWRSWEGPNGEVVDQIEQLIHDIK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN AL+ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 121 TNPDSRRLMVSAWNPALLPDTRKAPHENAADGKQALPPCHTLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GDVFLG+PFNIASY+LLT M+A V + G+FIHTLGD HLY+NH EQ LQLSR P L Sbjct: 181 GDVFLGVPFNIASYALLTCMVAQVCDLEVGDFIHTLGDAHLYSNHMEQTQLQLSRDPLPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ +NP + ++ F ++D + Y+ H I A V+V Sbjct: 241 PRLKLNPAVKNIFEFTFDDIEVVDYQSHPHIKAPVAV 277 >gi|116671564|ref|YP_832497.1| thymidylate synthase [Arthrobacter sp. FB24] gi|171855203|sp|A0JZC7|TYSY_ARTS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116611673|gb|ABK04397.1| thymidylate synthase [Arthrobacter sp. FB24] Length = 267 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 155/261 (59%), Positives = 194/261 (74%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GT S FG QMRFDLS+ FPL+TTK+VH+KSV ELLWFL Sbjct: 7 YEDLLRDVLANGTHKSDRTGTGTLSVFGRQMRFDLSQSFPLITTKRVHFKSVAVELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV ++ GV+IW+EWAD DGELGP+YGVQWRSWP DG IDQI+ +V++L+++P Sbjct: 67 RGETNVKWMQDQGVTIWNEWADADGELGPVYGVQWRSWPTPDGGHIDQIAELVENLKSNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHIVSAWNVA + MALPPCH FQFYV +GKLSCQLYQRS D FLG+PFNIASY+L Sbjct: 127 DSRRHIVSAWNVAELQDMALPPCHAFFQFYVADGKLSCQLYQRSADTFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA +G + GEF+ T GDVH+Y+NH +Q QL R P PQ+ I + + Sbjct: 187 LTCMLAQQVGLEPGEFVWTGGDVHIYDNHMDQVLKQLKREPYEYPQLKILRKPDSIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +DF + Y+ H I A ++V Sbjct: 247 LDDFEVVGYQHHPTIKAPIAV 267 >gi|220920733|ref|YP_002496034.1| thymidylate synthase [Methylobacterium nodulans ORS 2060] gi|254790243|sp|B8IF20|TYSY_METNO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219945339|gb|ACL55731.1| thymidylate synthase [Methylobacterium nodulans ORS 2060] Length = 264 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLR ++ G + DRTG GT S FG+QMRFDL++GFPL+TTK++H KS++HELL Sbjct: 1 MRAYHDLLRRILDDGVAKHDRTGTGTLSVFGHQMRFDLAEGFPLVTTKRLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL +GV+IWDEWAD+ G+LGP+YG QWRSW DG +DQI+ ++ +R Sbjct: 61 WFLAGDTNVAYLQSNGVTIWDEWADEHGDLGPVYGRQWRSWAKPDGGSVDQIAWVLDEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWN A +D+MAL PCHCLFQFY+ +LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNPADLDRMALAPCHCLFQFYIAERRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V+ + G+F+HTLGD HLY+NH QA QL+R R LP++ +NP + L Sbjct: 181 YALLTAMMAHVLDLEPGDFVHTLGDAHLYSNHVAQARQQLARDERPLPRLRLNPEVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRY+D + Y+PH AI A V+V Sbjct: 241 DFRYDDVVIEGYDPHPAIRAPVAV 264 >gi|124267240|ref|YP_001021244.1| thymidylate synthase [Methylibium petroleiphilum PM1] gi|171769837|sp|A2SHH0|TYSY_METPP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|124260015|gb|ABM95009.1| thymidylate synthase [Methylibium petroleiphilum PM1] Length = 283 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 159/269 (59%), Positives = 193/269 (71%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D LRHV G + DRTG GT S FG+QMRFDL +GFPL+TTKKVH KS+V ELLWF Sbjct: 15 QYEDFLRHVRDHGVVKADRTGTGTTSVFGHQMRFDLREGFPLVTTKKVHLKSIVLELLWF 74 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD N ++L GV+IWDEWA DG+LGP+YGVQWRSWP DG +DQI+ +V+ L+ + Sbjct: 75 LRGDGNATWLQERGVTIWDEWAAPDGDLGPVYGVQWRSWPTPDGGHVDQIAEVVKQLKTN 134 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + KMAL PCH FQFYV G+LSCQLYQRS D+FLG+P Sbjct: 135 PDSRRIIVSAWNVADLPKMALMPCHAFFQFYVAPGDSPSARGRLSCQLYQRSADIFLGVP 194 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT MLA + G+F+ T GD H+Y+NH EQ +LQLSR+PR P + I Sbjct: 195 FNIASYALLTHMLAQQCDLEVGDFVWTGGDCHIYSNHREQVELQLSRAPRPYPTLQIKRR 254 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + Y+PH AI A V+V Sbjct: 255 PPSIFDYAYEDFEIIGYDPHPAIKAPVAV 283 >gi|15838923|ref|NP_299611.1| thymidylate synthase [Xylella fastidiosa 9a5c] gi|22096234|sp|Q9PB13|TYSY_XYLFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|9107503|gb|AAF85131.1|AE004044_2 thymidylate synthase [Xylella fastidiosa 9a5c] Length = 264 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N++YL +H V IWDEWAD GELGP+YG QWR W DG+ IDQI +++ ++ Sbjct: 61 WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLLEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA V G G+F+HTLGD HLY NH EQA +QL R PR P +++NP + DL Sbjct: 181 YALLTHMLAQVTGLAVGDFVHTLGDAHLYANHVEQASVQLERVPRPQPVLMLNPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y+D + Y+P+ AI A V+V Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264 >gi|54295693|ref|YP_128108.1| thymidylate synthase [Legionella pneumophila str. Lens] gi|62901230|sp|Q5WSU5|TYSY_LEGPL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|53755525|emb|CAH17024.1| Thymidylate synthase [Legionella pneumophila str. Lens] Length = 264 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL Sbjct: 1 MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAKGFPLVTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD +G+LGP+YG QWRSWP DG IDQ+S +VQ ++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGGTIDQLSDVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A EFI T GD HLY NH EQA QL+R P LP + I L Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQTQLTREPLPLPSLAIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +Y+ H AI A ++V Sbjct: 241 DYAYEDFEFVNYQSHPAIKAPIAV 264 >gi|83310426|ref|YP_420690.1| thymidylate synthase [Magnetospirillum magneticum AMB-1] gi|82945267|dbj|BAE50131.1| Thymidylate synthase [Magnetospirillum magneticum AMB-1] Length = 275 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 +HQYLDLLR + G + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H +S+ ELL Sbjct: 12 LHQYLDLLRRIQAEGVTKTDRTGTGTTSVFGHQMRFDLSRGFPLVTTKKLHTRSIFVELL 71 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L + VSIWDEWAD +G+LGP+YG QWRSW DG+ +DQI+ +V+ +R Sbjct: 72 WFLRGDTNIGWLKDNKVSIWDEWADANGDLGPVYGKQWRSWACPDGSTVDQITQVVEMIR 131 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A I+ MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 132 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 191 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G + G F+HT GD HLY+NH EQA LQLSR+P LP++ +NP + DL Sbjct: 192 YALLTHMVAQVTGLEVGAFVHTFGDAHLYSNHMEQAALQLSRAPLPLPRLELNPEVKDLF 251 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D + Y+ HA I A V+V Sbjct: 252 AFTMDDIKVVDYQCHAHIAAPVAV 275 >gi|196249495|ref|ZP_03148192.1| Thymidylate synthase [Geobacillus sp. G11MC16] gi|196210789|gb|EDY05551.1| Thymidylate synthase [Geobacillus sp. G11MC16] Length = 264 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR +++ G +R DRTG GT S FG Q+RFDL KGFPLLTTKK+H +S+++ELL Sbjct: 1 MKQYLDLLRDILENGIEREDRTGTGTISVFGRQLRFDLQKGFPLLTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L+ +GV+IWDEWAD++G+LG IYG QWR+W D IDQI+ +V+ ++ Sbjct: 61 WFLRGDTNIRFLNENGVTIWDEWADENGDLGRIYGAQWRAWRTSDSGTIDQITRVVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV +D+MALPPCH FQFYV NG+LSC QRS D FLG+PFNIAS Sbjct: 121 HNPNSRRLLVSAWNVGELDQMALPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GE I + GDVHLY NH EQA LQL+ PR LP++II + Sbjct: 181 YALLTHMVAQQCDLEVGELIFSGGDVHLYKNHVEQAKLQLTHEPRPLPKLIIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF Y+PH AI A +SV Sbjct: 241 DYRYEDFEFVGYDPHPAIKAPISV 264 >gi|289663561|ref|ZP_06485142.1| thymidylate synthase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670949|ref|ZP_06492024.1| thymidylate synthase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 264 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLQGDTNIGYLSNNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NH +QA QL+R+PR LP + +NP++ DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHVDQAREQLTRTPRALPTLRLNPDVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|307544291|ref|YP_003896770.1| thymidylate synthase [Halomonas elongata DSM 2581] gi|307216315|emb|CBV41585.1| thymidylate synthase [Halomonas elongata DSM 2581] Length = 284 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 165/263 (62%), Positives = 215/263 (81%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL+R V++ G +R DRTGVGTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELLW Sbjct: 22 QPYLDLMRTVLEHGVERDDRTGVGTRSLFGHQMRFDLSRGFPLITTKKLHLRSIIHELLW 81 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL GD+N++YL +GV IWDEWAD++G+LGP+YG QWRSWPD G +DQI+ +++ LR Sbjct: 82 FLAGDTNIAYLKENGVRIWDEWADENGDLGPVYGYQWRSWPDPRGGHVDQIAGLLEQLRR 141 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR IVSAWN AL+D+MALPPCHCLFQFYV G+LSCQLYQRS D+FLG+PFNIASY Sbjct: 142 NPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVAEGRLSCQLYQRSADIFLGVPFNIASY 201 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A V G + G+F+HT GD HLY NH EQA+LQL+R+PR P++ ++P++ DL + Sbjct: 202 ALLTRMIAQVAGLEPGDFVHTFGDAHLYLNHLEQAELQLTRTPRPAPRLTLDPSVDDLFA 261 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 FR+E + Y+PH I A+V+V Sbjct: 262 FRFEHIAIEDYDPHPHIKAEVAV 284 >gi|325286854|ref|YP_004262644.1| Thymidylate synthase [Cellulophaga lytica DSM 7489] gi|324322308|gb|ADY29773.1| Thymidylate synthase [Cellulophaga lytica DSM 7489] Length = 274 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 161/277 (58%), Positives = 212/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+HV + G+ + DRTG GT S FGYQMRFDLSKGFP++TTKK+H KS++HELL Sbjct: 1 MKQYHDLLKHVQETGNQKGDRTGTGTISVFGYQMRFDLSKGFPMVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV IW+EWAD++G+LGP+YG QWR+W D IDQI ++++L+ Sbjct: 61 WFLKGDTNIAYLQENGVRIWNEWADENGDLGPVYGHQWRNWNSED---IDQIKEVIETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +V+AWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMLVTAWNPSVLPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ G+FIHT GD H+YNNH EQ +LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGDFIHTFGDAHIYNNHLEQVELQLSREPRAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+MIINP++ ++ F ++DFTL Y+PH I KV++ Sbjct: 238 PKMIINPDVKNIFDFTFDDFTLEGYDPHPHIKGKVAI 274 >gi|319408804|emb|CBI82461.1| Thymidylate synthase [Bartonella schoenbuchensis R1] Length = 264 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 182/264 (68%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRF+L GFPLLTTKK+H +S+++ELL Sbjct: 1 MKVYLDLLSHVLSNGVDRSDRTGVGTRSIFGYQMRFNLQAGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+++L HGVSIWDEWADKDG LGPIYG QWRSWP DG IDQIS+++ ++ Sbjct: 61 WFLRGDTNIAWLKEHGVSIWDEWADKDGNLGPIYGFQWRSWPAPDGRYIDQISNLLDTIN 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN ALI+ MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNPALIEDMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY NHFEQA QLSR+P LP M INP + DL Sbjct: 181 YALLTMMIAQVTGLKVGDFIHTLGDAHLYVNHFEQAKQQLSRTPGVLPVMFINPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +YE I A V+V Sbjct: 241 SFKFEDFNLLNYEAQPHIKAPVAV 264 >gi|108764037|ref|YP_634079.1| thymidylate synthase [Myxococcus xanthus DK 1622] gi|108467917|gb|ABF93102.1| thymidylate synthase [Myxococcus xanthus DK 1622] Length = 267 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL HV+ G + DRTG GT S FG Q+RFDL++GFPLLTTKKVH KS++HELL Sbjct: 4 MQPYLSLLDHVLHHGVKKGDRTGTGTLSVFGPQLRFDLTQGFPLLTTKKVHTKSILHELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L GD+NV L GV+IWDEWA+ DG LGP+YG QWRSW +G IDQ+ ++V+ L+ Sbjct: 64 WMLAGDTNVHTLQAQGVTIWDEWANADGSLGPVYGHQWRSWTAPNGEHIDQMKALVEGLK 123 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHI+SAWNVA + M LPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 124 KNPDSRRHIISAWNVADLPSMKLPPCHVLFQFYVANGRLSCQLYQRSADLFLGLPFNIAS 183 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLTMM+A V G Q EFIHT+GD HLY NH EQA QLSR PR LP++ INP + DL Sbjct: 184 YSLLTMMVAQVTGLQAHEFIHTVGDAHLYLNHVEQAKTQLSREPRPLPRIHINPEVTDLF 243 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+YEDFTL Y+PH AI A V+V Sbjct: 244 AFKYEDFTLEGYDPHPAIKAPVAV 267 >gi|301166943|emb|CBW26522.1| putative thymidylate synthase [Bacteriovorax marinus SJ] Length = 257 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 160/257 (62%), Positives = 203/257 (78%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 ++HV+ G ++ DRTG GT S FGYQ R+DLS+GFPL+TTKK H +S++HELLWFL+GD+ Sbjct: 1 MKHVLDNGVEKSDRTGTGTISCFGYQARYDLSEGFPLVTTKKCHLRSIIHELLWFLKGDT 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N++YL + V+IWDEWAD+DG LGP+YG QWR W DG+ +DQIS++V+ ++ +P SRR Sbjct: 61 NINYLKENKVTIWDEWADEDGNLGPVYGAQWRKWQRPDGSHVDQISNLVEQIKNNPDSRR 120 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 IVSAWN +ID+MALPPCH FQF+V N KLSCQLYQRS D+FLG+PFNIASY+LLTMM Sbjct: 121 LIVSAWNPGVIDQMALPPCHAFFQFFVANDKLSCQLYQRSADIFLGVPFNIASYALLTMM 180 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A V G + GEFIHTLGD HLY+NH +QA LQLSR PR LPQM INP + ++ F + DF Sbjct: 181 MAQVTGLEAGEFIHTLGDAHLYSNHLDQAKLQLSRDPRPLPQMKINPEVKNIFEFNFSDF 240 Query: 248 TLRSYEPHAAILAKVSV 264 L Y+PH I A V+V Sbjct: 241 ELVGYDPHPHIKAPVAV 257 >gi|332140100|ref|YP_004425838.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|332143102|ref|YP_004428840.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550122|gb|AEA96840.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553124|gb|AEA99842.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype'] Length = 277 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 163/277 (58%), Positives = 205/277 (74%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL L+RHV G ++DRTG GT S FGYQMRF+L +GFPL+TTKK H KS++HELL Sbjct: 1 MKEYLALMRHVRDTGVKKKDRTGTGTLSVFGYQMRFNLQEGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL HGV IWDEWA +GELGP+YG QWRSW DG +DQI+ +V+ ++ Sbjct: 61 WFLKGETNIAYLKEHGVKIWDEWATDEGELGPVYGHQWRSWDRGDGTSVDQIAEVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVS WN A++ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 121 NNPDSRRLIVSGWNPAVLPDTNYSPKENAAMGKQALPPCHTLFQFYVLDGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GD+FLGIPFNIASY+LLTMM+A V + G+FIHTLGD HLY+NH EQ +LQLSR P Sbjct: 181 GDIFLGIPFNIASYALLTMMIAQVCDLEPGDFIHTLGDAHLYSNHLEQVELQLSREPFER 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP + D+ F ++DFTL++Y+ H I A V++ Sbjct: 241 PTMEINPEVKDIFGFTFDDFTLKNYQSHPHIKAPVAI 277 >gi|295135495|ref|YP_003586171.1| thymidylate synthase [Zunongwangia profunda SM-A87] gi|294983510|gb|ADF53975.1| thymidylate synthase [Zunongwangia profunda SM-A87] Length = 274 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 161/277 (58%), Positives = 211/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL++++ G+++ DRTG GT+S FGYQMRF+LS+GFP++TTKKVH KS+++ELL Sbjct: 1 MKQYHDLLQYILDHGAEKGDRTGTGTKSVFGYQMRFNLSEGFPMVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD+ G+LGP+YG QWR+W + IDQIS I+++L+ Sbjct: 61 WFLKGDTNIKYLQENGVRIWNEWADEHGDLGPVYGHQWRNW---NSEEIDQISEIIETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 TNPNSRRMLVSAWNPSVMPDTAVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+L TMM+A V G++ G+FIHT GDVH+Y+NH EQ LQLSR+PR L Sbjct: 178 ADVFLGVPFNIASYALFTMMMAQVCGYEPGDFIHTFGDVHIYSNHMEQVKLQLSRTPRAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP I ++ F +EDF L Y+PH AI KV+V Sbjct: 238 PIMKMNPEITNIFDFSFEDFKLEGYDPHPAIKGKVAV 274 >gi|58583375|ref|YP_202391.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625200|ref|YP_452572.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166710720|ref|ZP_02241927.1| thymidylate synthase [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575368|ref|YP_001912297.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae PXO99A] gi|62901157|sp|Q5GWB5|TYSY_XANOR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123752707|sp|Q2NZH9|TYSY_XANOM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|58427969|gb|AAW77006.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369140|dbj|BAE70298.1| Thymidylate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519820|gb|ACD57765.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 264 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLQGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHF+QA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFDQARKQLTRTPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|114798205|ref|YP_759189.1| thymidylate synthase [Hyphomonas neptunium ATCC 15444] gi|122942752|sp|Q0C504|TYSY_HYPNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|114738379|gb|ABI76504.1| thymidylate synthase [Hyphomonas neptunium ATCC 15444] Length = 264 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY LLR +++ G R DRTGVGT FG QMRFDLS+GFP++TTK++H +S++ ELL Sbjct: 1 MQQYQALLRDILENGHKRGDRTGVGTIGVFGRQMRFDLSEGFPMVTTKRLHLRSIIVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL +GVSIWDEWAD++G+LGP+YG QWRSW +G IDQI ++ +R Sbjct: 61 WFLRGDTNIAYLKENGVSIWDEWADENGDLGPVYGKQWRSWATPNGEAIDQIQWVLNEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++ MALPPCHCLFQF V +GKL+CQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNPADVNDMALPPCHCLFQFNVMDGKLNCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G Q GEF+HT GD HLY NH EQA+LQL+R PR LP + +NP+ DL Sbjct: 181 YALLTMMMARATGLQPGEFVHTFGDAHLYLNHLEQAELQLTREPRDLPTIHMNPDKADLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF + Y PH I A V+V Sbjct: 241 GWEYEDFRVDGYAPHPHIKAPVAV 264 >gi|325964203|ref|YP_004242109.1| thymidylate synthase [Arthrobacter phenanthrenivorans Sphe3] gi|323470290|gb|ADX73975.1| thymidylate synthase [Arthrobacter phenanthrenivorans Sphe3] Length = 267 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 153/261 (58%), Positives = 192/261 (73%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GT S FG QMRFDLSK FPL+TTK+VH+KSV ELLWFL Sbjct: 7 YEDLLRDVLASGTHKSDRTGTGTTSVFGRQMRFDLSKSFPLITTKRVHFKSVAVELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV ++ GV+IW+EWAD DG+LGP+YGVQWRSWP DG IDQI+ ++ SL+++P Sbjct: 67 RGETNVKWMQDQGVTIWNEWADADGDLGPVYGVQWRSWPTPDGGHIDQIAELMDSLKSNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRH+VSAWNV+ + MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRHVVSAWNVSELRDMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A +G + GEF+ T GDVH+Y NH +Q QL R P PQ+ I + + Sbjct: 187 LTCMVAQQVGLEPGEFVWTGGDVHIYENHMDQVLKQLEREPYEYPQLKILRKPASIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 EDF + Y H I A ++V Sbjct: 247 LEDFEVVGYRHHPTIKAPIAV 267 >gi|189502717|ref|YP_001958434.1| hypothetical protein Aasi_1410 [Candidatus Amoebophilus asiaticus 5a2] gi|189498158|gb|ACE06705.1| hypothetical protein Aasi_1410 [Candidatus Amoebophilus asiaticus 5a2] Length = 264 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL HV+ G +++DRTG GT+S FGYQMRF+L++GFPL+TTKK+H KS+++ELL Sbjct: 1 MKQYLSLLGHVLHNGQEKKDRTGTGTKSIFGYQMRFNLAEGFPLMTTKKLHMKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL+++GV+IWDEWAD G LGPIYG QWRSWP + +DQI +++ ++ Sbjct: 61 WFLQGNTNIGYLNQNGVTIWDEWADAQGNLGPIYGYQWRSWPTSNHGKVDQIEQVIKQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A+P SRR +VSAWNV +DKMALPPCH LFQFYV N KLSCQLYQRS D+FLGIPFNIAS Sbjct: 121 ANPDSRRLLVSAWNVGELDKMALPPCHVLFQFYVANNKLSCQLYQRSADIFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + GEFIHTLGD HLYNNH EQA LQLSR+PR LP + +N + D+ Sbjct: 181 YALLTTMVAQVCDLEVGEFIHTLGDAHLYNNHIEQAQLQLSRAPRPLPTLKVNSAVKDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F+Y+DF + +Y P+ +I A ++V Sbjct: 241 AFQYDDFCIENYNPYPSIKAPIAV 264 >gi|121602325|ref|YP_989208.1| thymidylate synthase [Bartonella bacilliformis KC583] gi|166231691|sp|A1UTA5|TYSY_BARBK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120614502|gb|ABM45103.1| thymidylate synthase [Bartonella bacilliformis KC583] Length = 264 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 179/264 (67%), Positives = 215/264 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G+DR DRTGVGTRS FGYQMRF+L +GFPLLTTKK+H +S+++ELL Sbjct: 1 MKAYLDLLSHVLNNGTDRSDRTGVGTRSVFGYQMRFNLQEGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADKDG LGP+YG QWRSWP DG IDQIS+++ + Sbjct: 61 WFLKGDTNIAWLKEHGVSIWDEWADKDGNLGPVYGYQWRSWPSSDGRYIDQISNLLAMIN 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV+AWN ALID+MALPPCHCLFQF V NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPNSRRLIVTAWNPALIDEMALPPCHCLFQFQVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA QLSR+P LP + INP + DL Sbjct: 181 YALLTMMIAQVTGLKVGDFIHTLGDAHLYSNHFEQAKQQLSRTPGILPLIRINPKVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +YE I A V+V Sbjct: 241 SFQFEDFELLNYEAQPHIKAPVAV 264 >gi|124003691|ref|ZP_01688539.1| thymidylate synthase [Microscilla marina ATCC 23134] gi|123990746|gb|EAY30213.1| thymidylate synthase [Microscilla marina ATCC 23134] Length = 264 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 193/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV++ G + DRTG GT S FGYQMRF+L+ GFPL+TTKK+H +SV+HELL Sbjct: 1 MQQYTDLVQHVLENGVRKGDRTGTGTLSVFGYQMRFNLADGFPLVTTKKIHLRSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD DG LG +YG QWRSW G +DQI++++ ++ Sbjct: 61 WFLKGDTNIRYLQDNGVTIWDEWADDDGNLGSVYGAQWRSWQTATGETVDQITNLINQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV IDKMALPPCH +FQFYV GKLSCQLYQRS D+ LGIPFNIAS Sbjct: 121 RNPNSRRLMVSAWNVGEIDKMALPPCHTMFQFYVAEGKLSCQLYQRSADIGLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHT GD H+Y NH + Q+ R P LP++ +N + DL Sbjct: 181 YALLLEMVAQVTGLKAGEFIHTFGDAHIYANHEKALREQIQRKPYALPRLELNSEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YED + Y+ H I V+V Sbjct: 241 KFTYEDIKVVDYQYHPMIKLPVAV 264 >gi|264679393|ref|YP_003279300.1| thymidylate synthase [Comamonas testosteroni CNB-2] gi|262209906|gb|ACY34004.1| thymidylate synthase [Comamonas testosteroni CNB-2] Length = 294 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF Sbjct: 32 QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 LRGDSNV +L G +IWDEWADK G+LGP+YGVQWRSWP DG +DQI+ +V+ L++ Sbjct: 92 LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLKS 151 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR IVSAWNVA +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY Sbjct: 152 NPDSRRVIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 211 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA G + G+FI T GD H+YNNHFEQ QLSR P P + I + Sbjct: 212 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPASIFD 271 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + YEDF + Y+ HA I A V+V Sbjct: 272 YEYEDFEVLDYQHHAGIKAPVAV 294 >gi|319405984|emb|CBI79616.1| Thymidylate synthase [Bartonella sp. AR 15-3] Length = 264 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 212/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRF+L GFPLLTTKK+H +S+++ELL Sbjct: 1 MKAYLDLLFHVLNNGIDRLDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADK G+LGPIYG QWRSWP DG IDQI +++ ++ Sbjct: 61 WFLKGDTNIAWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTPDGRNIDQIKNLLAMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A I++MALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QNPDSRRLIVSAWNPAAIEEMALPPCHCLFQFYVAAGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A + Q G+FIHTLGD HLY NHFEQA+ QLSR+P+ LP M+INP + +L Sbjct: 181 YALLTMMIAQITHLQVGDFIHTLGDAHLYLNHFEQAEQQLSRTPKALPSMLINPEVKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF ++DF L +YE I A V+V Sbjct: 241 SFTFKDFELLNYEAFPHIKAPVAV 264 >gi|307565583|ref|ZP_07628063.1| thymidylate synthase [Prevotella amnii CRIS 21A-A] gi|307345742|gb|EFN91099.1| thymidylate synthase [Prevotella amnii CRIS 21A-A] Length = 264 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+ ++K G R DRTGVGT S FG+QM F++ GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYQDLLKRILKEGVKREDRTGVGTLSIFGHQMHFNMEDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LGP+YG QWRSWPDY G IDQI +++ ++ Sbjct: 61 WFLKGDTNVKYLQEHGVKIWNEWADENGDLGPVYGHQWRSWPDYKGGSIDQIKNVLDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +V+AWN A +D+MALPPCHCLFQFYV GKLS QLYQRS D FLG+PFNIAS Sbjct: 121 HSPSSRRMLVTAWNPAEVDEMALPPCHCLFQFYVAEGKLSLQLYQRSADTFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLL M+A V G + GEFIHT GD H+Y NH EQ LQL+R+PR LP++IINP++ DL Sbjct: 181 YSLLLHMMAQVTGLKVGEFIHTTGDTHIYLNHLEQVKLQLTRTPRPLPKIIINPDVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF Y+DF + Y P+ I V+V Sbjct: 241 SFHYDDFKIEDYNPYPHIPGTVAV 264 >gi|30248582|ref|NP_840652.1| thymidylate synthase [Nitrosomonas europaea ATCC 19718] gi|62901360|sp|Q82WU3|TYSY_NITEU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|30180177|emb|CAD84479.1| Thymidylate synthase [Nitrosomonas europaea ATCC 19718] Length = 264 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+QYLDL+RHV+++G + DRTG GT S FGYQMRFDL GFPL+TTKK H KS++HELL Sbjct: 1 MYQYLDLMRHVLQYGHKKSDRTGTGTLSVFGYQMRFDLQTGFPLVTTKKCHVKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ YL R+GVSIWDEWAD++G+LGPIYG QWRSW DG VIDQIS ++Q ++ Sbjct: 61 WFLRGETNIDYLKRNGVSIWDEWADENGDLGPIYGHQWRSWAASDGTVIDQISQVIQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV +DKM L PCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ETPDSRRMIVSAWNVGDLDKMKLAPCHVLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT+M+A Q GEF+HT GD HLY NH EQA LQL R PR LP M +N + ++ Sbjct: 181 YSLLTLMIAQCCDLQPGEFVHTFGDAHLYLNHLEQARLQLEREPRALPAMQLNSTVRNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YEDFTL Y+P+ I A V+V Sbjct: 241 DFGYEDFTLHDYDPYPPIKAPVAV 264 >gi|294626073|ref|ZP_06704681.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599609|gb|EFF43738.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 264 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V +R Sbjct: 61 WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWSGPDGVEIDQMQWLVDEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRAPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|115372682|ref|ZP_01459989.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] gi|310823834|ref|YP_003956192.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] gi|115370403|gb|EAU69331.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] gi|309396906|gb|ADO74365.1| Thymidylate synthase [Stigmatella aurantiaca DW4/3-1] Length = 264 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 175/264 (66%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+K G+ R DRTG GT S FG Q+RFDL++GFPLLTTKK+H KS++HELL Sbjct: 1 MKQYLDLLDRVLKDGTKRGDRTGTGTLSLFGPQLRFDLTQGFPLLTTKKLHLKSILHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W LRGD++V L GV+IWDEWAD G LGP+YG QWRSW G IDQ+ +V+SLR Sbjct: 61 WMLRGDTSVRSLQAQGVTIWDEWADAQGNLGPVYGHQWRSWSGPQGQSIDQMRQVVESLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA + M LPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPESRRHIVSAWNVADLPAMKLPPCHILFQFYVANGRLSCQLYQRSADLFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G EFIHTLGD HLY NH EQA QL+R PR LP+M +NP + DL Sbjct: 181 YALLTMMVAQATGLTAHEFIHTLGDAHLYLNHVEQARTQLAREPRPLPRMQLNPEVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FRYEDFTL+ YEPH AI A V+V Sbjct: 241 AFRYEDFTLQEYEPHPAIKAPVAV 264 >gi|86131361|ref|ZP_01049959.1| Thymidylate synthase [Dokdonia donghaensis MED134] gi|85817806|gb|EAQ38974.1| Thymidylate synthase [Dokdonia donghaensis MED134] Length = 274 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 160/277 (57%), Positives = 210/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV+ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLMKHVLAEGNFKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GV IW+EWAD++G+LGP+YG QWR+W +G+ IDQI IV++L+ Sbjct: 61 WFLQGDTNVKYLQENGVRIWNEWADENGDLGPVYGYQWRNW---NGDEIDQIKDIVETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 KNPNSRRMLVSAWNPSVMPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR RTL Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQVELQLSREIRTL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + INP + D+ F ++DFTL +Y PH I V+V Sbjct: 238 PTLKINPEVKDIFGFTFDDFTLENYNPHPHIKGAVAV 274 >gi|163793369|ref|ZP_02187344.1| thymidylate synthase [alpha proteobacterium BAL199] gi|159181171|gb|EDP65686.1| thymidylate synthase [alpha proteobacterium BAL199] Length = 264 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 168/264 (63%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HV+ G+ + DRTG GTRS FG+QMRFDLSKGFP++TTKK+H KS+VHELL Sbjct: 1 MRQYLDLMTHVLTDGALKGDRTGTGTRSVFGHQMRFDLSKGFPMVTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL GV IW+EWA DG+LGP+YG QWRSW DG+ +DQIS ++ LR Sbjct: 61 WFLAGDTNVRYLQERGVRIWNEWARPDGDLGPVYGKQWRSWGSPDGSTVDQISVLLDQLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NNPNSRRLIVSAWNVGELDDMALAPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G GEF+HT GD HLY NH EQA QL R P LP++ +NPN+ DL Sbjct: 181 YALLTHMIAHVTGLGVGEFVHTFGDAHLYLNHLEQARRQLQREPLPLPRLWLNPNVKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +ED + YE H I A V+V Sbjct: 241 EFTFEDVRIDGYEAHPHIAAPVAV 264 >gi|294665699|ref|ZP_06730974.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604541|gb|EFF47917.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 347 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 159/263 (60%), Positives = 206/263 (78%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELLW Sbjct: 85 KPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELLW 144 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 145 FLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIKR 204 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIASY Sbjct: 205 NPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIASY 264 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL + Sbjct: 265 ALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRAPRALPTLRLNPEVTDLFA 324 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + Y+PH AI A V+V Sbjct: 325 FRFEDIAIEGYDPHPAIKAPVAV 347 >gi|126662422|ref|ZP_01733421.1| thymidylate synthetase [Flavobacteria bacterium BAL38] gi|126625801|gb|EAZ96490.1| thymidylate synthetase [Flavobacteria bacterium BAL38] Length = 274 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 158/277 (57%), Positives = 205/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV++ G+ + DRTG GT S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLVKHVLENGNQKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IWDEWAD++G LGP+YG QWR+W + IDQI+ ++++L+ Sbjct: 61 WFLNGDTNIKYLQENGVKIWDEWADENGNLGPVYGHQWRNW---NSEEIDQITELIETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 TNPNSRRMLVSAWNPSVLPDTSVSFAENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V Q G+FIHT GD H+YNNH EQ +LQLSR R L Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCDLQVGDFIHTFGDAHIYNNHMEQVELQLSRDCRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP I ++ F++EDFTL Y+PH I V+V Sbjct: 238 PTMKLNPEIKNIFDFKFEDFTLEGYDPHPHIKGIVAV 274 >gi|21241612|ref|NP_641194.1| thymidylate synthase [Xanthomonas axonopodis pv. citri str. 306] gi|25091469|sp|Q8PP46|TYSY_XANAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|21106971|gb|AAM35730.1| thymidylate synthase [Xanthomonas axonopodis pv. citri str. 306] Length = 264 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+HV+ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLELLQHVLDHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL H V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLSDHQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPSLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|332291421|ref|YP_004430030.1| thymidylate synthase [Krokinobacter diaphorus 4H-3-7-5] gi|332169507|gb|AEE18762.1| thymidylate synthase [Krokinobacter diaphorus 4H-3-7-5] Length = 274 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 160/277 (57%), Positives = 212/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+V+ELL Sbjct: 1 MKQYHDLIKHVLENGNQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD++G+LGP+YG QWR+W +G+ IDQI IV++L+ Sbjct: 61 WFLQGDTNIKYLQENGVRIWNEWADENGDLGPVYGYQWRNW---NGDEIDQIKDIVETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 TNPNSRRMLVSAWNPSVMPDTSASFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+Y+NH EQ +LQLSR RTL Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYSNHMEQVELQLSREFRTL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + INP++ D+ F ++DFTL +Y PH I V++ Sbjct: 238 PTLKINPDVKDIFGFTFDDFTLENYNPHPHIKGAVAI 274 >gi|325917331|ref|ZP_08179549.1| thymidylate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325536465|gb|EGD08243.1| thymidylate synthase [Xanthomonas vesicatoria ATCC 35937] Length = 264 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLRHV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLDLLRHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLQGDTNIGYLKDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELSQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY NHF+QA +QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYANHFDQARVQLTRAPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264 >gi|118594685|ref|ZP_01552032.1| thymidylate synthase [Methylophilales bacterium HTCC2181] gi|118440463|gb|EAV47090.1| thymidylate synthase [Methylophilales bacterium HTCC2181] Length = 264 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQYLDLLRHV G+ ++DRTG GT S FGYQMRFDL++GFPLLTTKK+H KSV++ELL Sbjct: 1 MHQYLDLLRHVKSNGTVKKDRTGTGTISVFGYQMRFDLNEGFPLLTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV +L +G+SIWDEWAD G LGP+YG QWRSW ++G IDQI ++ ++ Sbjct: 61 WFLTGDTNVKFLKDNGISIWDEWADDKGNLGPVYGHQWRSWSSHNGESIDQIKILIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA ID+M LPPCH FQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 VNPDSRRLIVSAWNVADIDQMKLPPCHAFFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + GEF+HTLGD H+Y NH EQ QLSR P+TLP M +N +I ++ Sbjct: 181 YALLTMMIAQVCGLRLGEFVHTLGDAHIYLNHEEQVTQQLSREPKTLPIMTLNKSIDNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF+L Y+P I A V+V Sbjct: 241 DFTFDDFSLEGYDPEPLIKAPVAV 264 >gi|7766860|pdb|1EV8|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli Length = 264 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 150/263 (57%), Positives = 198/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL P H FQFYV +GKLSCQLYQR DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRCXDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|5542439|pdb|1QQQ|A Chain A, Crystal Structure Analysis Of Ser254 Mutant Of Escherichia Coli Thymidylate Synthase Length = 264 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 150/263 (57%), Positives = 198/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL P H FQFYV +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRSXDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+ H I A V++ Sbjct: 242 YRFEDFEIEGYDSHPGIKAPVAI 264 >gi|52843063|ref|YP_096862.1| thymidylate synthase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|62901244|sp|Q5ZRL3|TYSY_LEGPH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|52630174|gb|AAU28915.1| thymidylate synthase (TS) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 264 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H+++ G ++ DRTG GT S FGYQMRFDL++GFPL+TTKK+H +S+VHELL Sbjct: 1 MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAQGFPLVTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD +G+LGP+YG QWRSWP DG IDQ+S +VQ ++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGRTIDQLSEVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A EFI T GD HLY NH EQA +QL+R P LP + I L Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLAIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +Y+ H AI A ++V Sbjct: 241 DYAYEDFEFLNYQSHPAIKAPIAV 264 >gi|78046451|ref|YP_362626.1| thymidylate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123744059|sp|Q3BX87|TYSY_XANC5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|78034881|emb|CAJ22526.1| thymidylate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 264 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR+ED + Y PH AI A V+V Sbjct: 241 GFRFEDIAIEGYAPHPAIKAPVAV 264 >gi|226307948|ref|YP_002767908.1| thymidylate synthase [Rhodococcus erythropolis PR4] gi|229495127|ref|ZP_04388873.1| thymidylate synthase [Rhodococcus erythropolis SK121] gi|226187065|dbj|BAH35169.1| thymidylate synthase [Rhodococcus erythropolis PR4] gi|229318058|gb|EEN83933.1| thymidylate synthase [Rhodococcus erythropolis SK121] Length = 266 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 162/261 (62%), Positives = 199/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG+QMRFDL+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 7 YEDLLRLVMETGTAKSDRTGTGTRSIFGHQMRFDLADGFPLVTTKKVHLKSIVNELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV++LH HGVSIWDEWAD++GELGP+YGVQWRSWP G IDQI+ V++LR++P Sbjct: 67 RGDSNVAWLHEHGVSIWDEWADENGELGPVYGVQWRSWPTPSGEHIDQITQTVETLRSNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNVA I +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVADIPQMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G GEF+ T GD H+Y+NH +Q QL R P LP + +N + + Sbjct: 187 LTHMMAQQAGLDVGEFVWTGGDCHIYDNHVDQVTEQLGREPLPLPTLKLN-KRDSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y+ H AI A V+V Sbjct: 246 FEDVEIVDYQHHPAIKAPVAV 266 >gi|71276155|ref|ZP_00652435.1| Thymidylate synthase [Xylella fastidiosa Dixon] gi|71900364|ref|ZP_00682498.1| Thymidylate synthase [Xylella fastidiosa Ann-1] gi|170730616|ref|YP_001776049.1| thymidylate synthase [Xylella fastidiosa M12] gi|71163073|gb|EAO12795.1| Thymidylate synthase [Xylella fastidiosa Dixon] gi|71729867|gb|EAO31964.1| Thymidylate synthase [Xylella fastidiosa Ann-1] gi|167965409|gb|ACA12419.1| Thymidylate synthase [Xylella fastidiosa M12] Length = 264 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N++YL +H V IWDEWAD GELGP+YG QWR W DG+ IDQI +V+ ++ Sbjct: 61 WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA V G G+F+HTLGD HLY NH EQA +QL R PR P + +N + DL Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y+D + Y+P+ AI A V+V Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264 >gi|307611741|emb|CBX01446.1| thymidylate synthase [Legionella pneumophila 130b] Length = 264 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL Sbjct: 1 MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAKGFPLVTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD +G+LGP+YG QWRSWP DG IDQ+S +VQ ++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGRTIDQLSDVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +D+MAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGELDQMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A EFI T GD HLY NH EQA QL+R P LP + I L Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQTQLTREPLPLPSLAIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +Y+ H AI A ++V Sbjct: 241 EYVYEDFEFVNYQSHPAIKAPIAV 264 >gi|28199248|ref|NP_779562.1| thymidylate synthase [Xylella fastidiosa Temecula1] gi|182681974|ref|YP_001830134.1| thymidylate synthase [Xylella fastidiosa M23] gi|32130273|sp|Q87BT4|TYSY_XYLFT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|28057354|gb|AAO29211.1| thymidylate synthase [Xylella fastidiosa Temecula1] gi|182632084|gb|ACB92860.1| Thymidylate synthase [Xylella fastidiosa M23] gi|307578239|gb|ADN62208.1| thymidylate synthase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 264 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLELLNDVLVHGIKKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N++YL +H V IWDEWAD GELGP+YG QWR W DG+ IDQI +V+ ++ Sbjct: 61 WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA V G G+F+HTLGD HLY NH EQA +QL R PR P + +N + DL Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y+D + Y+P+ AI A V+V Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264 >gi|225011474|ref|ZP_03701912.1| Thymidylate synthase [Flavobacteria bacterium MS024-2A] gi|225003977|gb|EEG41949.1| Thymidylate synthase [Flavobacteria bacterium MS024-2A] Length = 274 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 160/277 (57%), Positives = 211/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HV+ GS++ DRTG GT+S FGYQMRFDLSKGFPL+TTKK+H+KS+VHELL Sbjct: 1 MKQYLDLVNHVLATGSEKTDRTGTGTKSVFGYQMRFDLSKGFPLVTTKKIHFKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD+ G LGP+YG QWR+W + IDQI ++ +L+ Sbjct: 61 WFLKGDTNIEYLQENGVRIWNEWADEKGNLGPVYGHQWRNW---NSEGIDQIQEVINTLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 TNPDSRRMLVSAWNPSVLPDTKVSFSKNVANNKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLT+M+A V G++ G+F+H+ GDVH+Y+NHFEQ QLSR+P+ L Sbjct: 178 ADVFLGVPFNIASYALLTLMVAQVCGYEPGDFVHSFGDVHIYSNHFEQLKEQLSRAPKAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP I ++ F Y+DF L +Y+P+ I KV++ Sbjct: 238 PEMHLNPEIKNIFDFTYDDFELINYDPYPLIKGKVAI 274 >gi|71898344|ref|ZP_00680517.1| Thymidylate synthase [Xylella fastidiosa Ann-1] gi|71731867|gb|EAO33925.1| Thymidylate synthase [Xylella fastidiosa Ann-1] Length = 264 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL Sbjct: 1 MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N++YL +H V IWDEWAD GELGP+YG QWR W DG+ IDQI +V+ ++ Sbjct: 61 WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA V G G+F+HTLGD HLY NH EQA +QL R PR P + +N + DL Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F Y+D + Y+P+ AI A V+V Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264 >gi|308799723|ref|XP_003074642.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 / DHFR-TS (ISS) [Ostreococcus tauri] gi|116000813|emb|CAL50493.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 / DHFR-TS (ISS) [Ostreococcus tauri] Length = 751 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 133/283 (46%), Positives = 184/283 (65%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYLD++R +I G+ + DRTG GT STFG QMRFDL + FPLLTTK+V W+ V ELLW Sbjct: 469 HQYLDMIREIIDQGAVKGDRTGTGTISTFGNQMRFDLRRSFPLLTTKRVFWRGVAEELLW 528 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G++N + L ++IWD ++ G+LGP+YG QWR + Sbjct: 529 FVAGETNANKLAEKKINIWDGNGSREYLDSIGLTEREVGDLGPVYGFQWRHFGAEYTNMH 588 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ +P RR +++AWN A + +MALPPCH QFYV NG+LSC Sbjct: 589 ADYTGKGVDQLAEVINKIKNNPTDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSC 648 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V + G+F+H GD H+Y+NH E QL+ Sbjct: 649 QMYQRSCDMGLGVPFNIASYSLLTCMIAQVCDLKPGDFVHVCGDTHVYSNHVEPLKKQLT 708 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P + INP D+ SF ++DF + Y+PH I K++V Sbjct: 709 CEPRPFPILKINPEKKDIDSFTFDDFEIIGYDPHPKIEMKMAV 751 >gi|319950119|ref|ZP_08024059.1| thymidylate synthase [Dietzia cinnamea P4] gi|319436222|gb|EFV91402.1| thymidylate synthase [Dietzia cinnamea P4] Length = 266 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 163/261 (62%), Positives = 204/261 (78%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL+ V++ G+ + DRTG GTRS FG+Q+R+DL++GFPL+TTK+VH+KSV +ELLWFL Sbjct: 7 YEDLLQLVLEQGAPKADRTGTGTRSLFGHQLRYDLAQGFPLITTKRVHFKSVAYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +GV+IWDEWAD DGELGP+YGVQWRSWP DG IDQI++ V+ LRADP Sbjct: 67 RGDSNVGWLRENGVTIWDEWADADGELGPVYGVQWRSWPTPDGAHIDQIAAAVELLRADP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ + +MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 127 DSRRNIVSAWNVSELSEMALPPCHLLFQFYVADGKLSCQLYQRSADLFLGVPFNIASYSL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A +G + GEFI T GD H+Y+NH EQ QLSR P P++ +N + + Sbjct: 187 LTHMIAQQVGLEVGEFIWTGGDCHIYDNHVEQVRTQLSREPYPYPELRLNRAP-SIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +EDF + YE H I A V+V Sbjct: 246 FEDFEVVGYEHHPGIKAPVAV 266 >gi|297528628|ref|YP_003669903.1| thymidylate synthase [Geobacillus sp. C56-T3] gi|297251880|gb|ADI25326.1| thymidylate synthase [Geobacillus sp. C56-T3] Length = 264 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR ++K G ++ DRTG GT S FG Q+RFDL KGFPLLTTKK+H +S+++ELL Sbjct: 1 MKQYLDLLRDILKNGIEKEDRTGTGTISVFGRQLRFDLQKGFPLLTTKKLHIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L+ +GV+IWDEWAD++GELG IYG QWR+W DG IDQI+ +++ ++ Sbjct: 61 WFLRGDTNVRFLNENGVTIWDEWADENGELGRIYGAQWRAWRTADGGTIDQITRVIEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WN+ +D+MALPPCH FQFYV G+LSC QRS D FLG+PFNIAS Sbjct: 121 HNPNSRRLLVSSWNIGELDQMALPPCHYAFQFYVAAGRLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GE I + GDVHLY NH EQA LQL+R P LP++II + Sbjct: 181 YALLTHMVAQQCDLEVGELIFSGGDVHLYKNHVEQAKLQLTRDPCPLPKLIIKRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF Y+PH AI A +SV Sbjct: 241 GYCYEDFEFVGYDPHPAIKAPISV 264 >gi|163786432|ref|ZP_02180880.1| Thymidylate synthase [Flavobacteriales bacterium ALC-1] gi|159878292|gb|EDP72348.1| Thymidylate synthase [Flavobacteriales bacterium ALC-1] Length = 274 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 159/277 (57%), Positives = 206/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV+ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLVKHVLAEGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N YL +GV IW+EWAD +G+LGP+YG QWR+W IDQI ++ +L+ Sbjct: 61 WFLKGDTNTKYLTENGVRIWNEWADDNGDLGPVYGHQWRNWAS---EEIDQIKEVITTLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L T M+A V GF+ G+FIHT GD H+YNNH EQ +LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALFTKMMAQVCGFEAGDFIHTFGDAHIYNNHMEQLELQLSRVPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+MI+NP + D+ F++EDFTL Y PH I V+V Sbjct: 238 PKMILNPEVKDIFDFKFEDFTLVDYNPHPHIKGVVAV 274 >gi|121593609|ref|YP_985505.1| thymidylate synthase [Acidovorax sp. JS42] gi|171769450|sp|A1W5A4|TYSY_ACISJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120605689|gb|ABM41429.1| thymidylate synthase [Acidovorax sp. JS42] Length = 277 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 161/270 (59%), Positives = 193/270 (71%), Gaps = 7/270 (2%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DL+RHV + G+ + DRTG GT+S FG+QMRFDLS+GFPL+TTKKVH KS++ ELLW Sbjct: 8 HQYEDLMRHVFEHGTAKGDRTGTGTKSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGDSNV +L G +IWDEWA DG LGP+YGVQWRSWP DG IDQI ++ +L+ Sbjct: 68 FLRGDSNVRWLQERGCTIWDEWARDDGSLGPVYGVQWRSWPTPDGGHIDQIQQVIDTLKT 127 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGI 174 P SRR IVSAWNVA +D+MAL PCH FQFYV GKLSCQLYQRS D+FLG+ Sbjct: 128 HPDSRRIIVSAWNVAELDRMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGV 187 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT M+A Q G+FI T GD H+Y+NHFEQ QL+R P P + I Sbjct: 188 PFNIASYALLTHMVAQQCDLQVGDFIWTGGDCHIYSNHFEQVRTQLARQPYAYPTLQIKR 247 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + YE H AI A V+V Sbjct: 248 RPASIFDYAYEDFEVVGYEHHPAIKAPVAV 277 >gi|170739398|ref|YP_001768053.1| thymidylate synthase [Methylobacterium sp. 4-46] gi|168193672|gb|ACA15619.1| Thymidylate synthase [Methylobacterium sp. 4-46] Length = 264 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 158/264 (59%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLR ++ G ++ DRTG GT S FG+QMRFDL++GFPL+TTK++H KS++HELL Sbjct: 1 MRAYHDLLRRILDDGVEKHDRTGTGTLSVFGHQMRFDLAEGFPLVTTKRLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL +GV+IWDEWAD+ G+LGP+YG QWRSW DG +DQI+ ++ +R Sbjct: 61 WFLAGDTNVAYLQSNGVTIWDEWADEHGDLGPVYGKQWRSWAKPDGGSLDQIAWVLDEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWN A +D+MAL PCHCLFQFYV G+LSCQLYQRS D FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNPADLDRMALAPCHCLFQFYVAQGRLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V+ G+F+HTLGD HLY NH QA QL+R R LPQ+ +NP + L Sbjct: 181 YALLTAMMAQVLDLVPGDFVHTLGDAHLYVNHVAQARQQLARDHRPLPQLRLNPQVRSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FR++D L Y+PH AI A V+V Sbjct: 241 DFRHDDVVLEGYDPHPAIRAPVAV 264 >gi|150024438|ref|YP_001295264.1| thymidylate synthase [Flavobacterium psychrophilum JIP02/86] gi|166231699|sp|A6GWH3|TYSY_FLAPJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|149770979|emb|CAL42446.1| Thymidylate synthase [Flavobacterium psychrophilum JIP02/86] Length = 274 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 158/277 (57%), Positives = 212/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+++V+ G+ + DRTG GT+S FGYQMRF+L++GFP++TTKK+H KS++HELL Sbjct: 1 MKQYLDLVKYVLNNGTQKGDRTGTGTKSVFGYQMRFNLAEGFPMVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL ++GV IWD+WAD++GELGP+YG QWR+W + IDQI+ ++++L+ Sbjct: 61 WFLKGETNIAYLQQNGVKIWDDWADENGELGPVYGHQWRNW---NNEEIDQITELIETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K+ALPPCH FQFYV GKLSCQLYQRS Sbjct: 118 INPNSRRMLVSAWNPSVLPDTTKSFAENVANAKVALPPCHAFFQFYVSEGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V Q GEFIHT GD H+YNNHFEQ LQLSR P+ L Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCDLQAGEFIHTFGDAHIYNNHFEQVALQLSREPKPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+MI+NP + ++ F++EDF L YE HA I V+V Sbjct: 238 PKMILNPAVKNIFDFKFEDFKLEGYESHAHIKGAVAV 274 >gi|332765782|gb|EGJ95995.1| thymidylate synthase [Shigella flexneri 2930-71] Length = 257 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 147/257 (57%), Positives = 195/257 (75%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 ++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLWFL+GD+ Sbjct: 1 MQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDT 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ DP SRR Sbjct: 61 NIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRR 120 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LL M Sbjct: 121 IIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHM 180 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + +R+EDF Sbjct: 181 MAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDF 240 Query: 248 TLRSYEPHAAILAKVSV 264 + Y+PH + A V++ Sbjct: 241 EIEGYDPHPGVKAPVAI 257 >gi|222110329|ref|YP_002552593.1| thymidylate synthase [Acidovorax ebreus TPSY] gi|221729773|gb|ACM32593.1| thymidylate synthase [Acidovorax ebreus TPSY] Length = 277 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 161/270 (59%), Positives = 193/270 (71%), Gaps = 7/270 (2%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DL+RHV + G+ + DRTG GTRS FG+QMRFDL++GFPL+TTKKVH KS++ ELLW Sbjct: 8 HQYEDLMRHVFEHGTAKGDRTGTGTRSVFGHQMRFDLAEGFPLVTTKKVHLKSIILELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGDSNV +L G +IWDEWA DG LGP+YGVQWRSWP DG IDQI ++ +L+ Sbjct: 68 FLRGDSNVRWLQERGCTIWDEWARDDGSLGPVYGVQWRSWPTPDGGHIDQIQQVIDTLKT 127 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGI 174 P SRR IVSAWNVA +D+MAL PCH FQFYV GKLSCQLYQRS D+FLG+ Sbjct: 128 HPDSRRIIVSAWNVAELDQMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGV 187 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT M+A Q G+FI T GD H+Y+NHFEQ QL+R P P + I Sbjct: 188 PFNIASYALLTHMVAQQCDLQVGDFIWTGGDCHIYSNHFEQVQTQLARQPYAYPTLQIMR 247 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + YE H AI A V+V Sbjct: 248 RPASIFDYAYEDFEVVGYEHHPAIKAPVAV 277 >gi|196231360|ref|ZP_03130219.1| Thymidylate synthase [Chthoniobacter flavus Ellin428] gi|196224696|gb|EDY19207.1| Thymidylate synthase [Chthoniobacter flavus Ellin428] Length = 264 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V+ G + DRTG GT S FG Q RFDLS GFPLLTTKK+H KS++HELL Sbjct: 1 MRAYLDLLTLVLDHGRFKPDRTGTGTYSVFGAQARFDLSSGFPLLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL ++GV+IW+EWAD+DG LG +YG QWR W DG IDQI +++ ++ Sbjct: 61 WFLAGDTNVRYLQQNGVTIWNEWADEDGNLGRVYGAQWRDWITADGRHIDQIDNVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN +D MALPPCH +FQF+V +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPGEVDTMALPPCHAMFQFFVLDGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G Q G+F+HT GD+HLY NH +QA QL+R+PR LP M ++P I D+ Sbjct: 181 YALLTMMVAQVTGLQPGDFVHTFGDLHLYANHLDQAREQLTRTPRPLPTMTLSPAIRDIH 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+PH AI A ++V Sbjct: 241 GFRYEDFVLSGYDPHPAIKAPIAV 264 >gi|285019528|ref|YP_003377239.1| thymidylate synthase [Xanthomonas albilineans GPE PC73] gi|283474746|emb|CBA17245.1| probable thymidylate synthase protein [Xanthomonas albilineans] Length = 264 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LLRHV+ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S+VHELL Sbjct: 1 MTPYLELLRHVLTHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL + VSIWDEWAD GELGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLKGETNIAYLKDNKVSIWDEWADAQGELGPVYGKQWRRWAGADGREIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVVSAWNVAELPQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHF QA QL+R+PR LP++ +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFAQAREQLARTPRPLPRLRLNPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F Y+D + Y+PH AI A V+V Sbjct: 241 AFTYDDIAIEGYDPHPAIKAPVAV 264 >gi|299530475|ref|ZP_07043895.1| thymidylate synthase [Comamonas testosteroni S44] gi|298721451|gb|EFI62388.1| thymidylate synthase [Comamonas testosteroni S44] Length = 282 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF Sbjct: 20 QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 79 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 LRGDSNV +L G +IWDEWADK G+LGP+YGVQWRSWP DG +DQI+ +V+ L++ Sbjct: 80 LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLKS 139 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR IVSAWNVA +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY Sbjct: 140 NPDSRRIIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 199 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA G + G+FI T GD H+YNNHFEQ QLSR P P + I + Sbjct: 200 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPASIFD 259 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + YEDF + Y+ HA I A V+V Sbjct: 260 YEYEDFEVLDYQHHAGIKAPVAV 282 >gi|304321193|ref|YP_003854836.1| thymidylate synthase [Parvularcula bermudensis HTCC2503] gi|303300095|gb|ADM09694.1| thymidylate synthase [Parvularcula bermudensis HTCC2503] Length = 264 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 165/264 (62%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H++ G R DRTG GT S FG+QMRF+LS GFPL+TTKKVH KSVVHELL Sbjct: 1 MQAYLSLLSHLLDNGVLRDDRTGTGTYSVFGHQMRFELSDGFPLVTTKKVHMKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL HGV IWDEWAD++G LGP+YG QWRSWP G IDQI+ + +R Sbjct: 61 WFLSGDTNIGYLKEHGVRIWDEWADENGNLGPVYGAQWRSWPGPGGKTIDQIAWVQNEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWN +D+MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 HNPTSRRLVVSAWNPGQLDQMALAPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA G G+F+H+ GDVHLY NH +QA QL+R PR LPQ+ + P + D+ Sbjct: 181 YALLTHMLAQSTGLGVGDFVHSFGDVHLYTNHVDQAKQQLARQPRDLPQLRLAPEVSDIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYE T+ Y+PH AI A V+V Sbjct: 241 DFRYEHITVEGYDPHPAIKAPVAV 264 >gi|163868690|ref|YP_001609902.1| thymidylate synthase [Bartonella tribocorum CIP 105476] gi|189036927|sp|A9IW82|TYSY_BART1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|161018349|emb|CAK01907.1| Thymidylate synthase [Bartonella tribocorum CIP 105476] Length = 264 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 177/264 (67%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL HV+ G DR DRTGVGTRS FGYQMRFDL GFPLLTTKK+H +S+++ELL Sbjct: 1 MKSYLALLSHVLNQGIDRTDRTGVGTRSIFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADK G LGP+YG QWRSWP DG IDQI ++++ ++ Sbjct: 61 WFLKGDTNIAWLKEHGVSIWDEWADKQGNLGPVYGYQWRSWPAPDGRHIDQIDNLLRMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN ALI++MALPPCHCLFQFY+D GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 EKPDSRRLIVSAWNPALIEEMALPPCHCLFQFYIDEGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHT GD HLY+NHFEQA QLSR P LP M INP + DL Sbjct: 181 YALLTMMIAQVSGLKVGDFIHTFGDAHLYSNHFEQAQYQLSRIPNALPCMRINPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +YE H I A V++ Sbjct: 241 SFKFEDFELLNYEAHPHIKAPVAI 264 >gi|7766861|pdb|1EVF|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli Length = 264 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 150/263 (57%), Positives = 199/263 (75%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELLW Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLW 61 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 62 FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNV +DKMAL P H FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRTXDVFLGLPFNIASY 181 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + Sbjct: 182 ALLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A V++ Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264 >gi|114706847|ref|ZP_01439747.1| thymidylate synthase [Fulvimarina pelagi HTCC2506] gi|114537795|gb|EAU40919.1| thymidylate synthase [Fulvimarina pelagi HTCC2506] Length = 264 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 172/264 (65%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+DR DRTG GTRS FG+QMRFDL +GFPLLTTK++H +S+VHELL Sbjct: 1 MRQYLDLLARVLGEGTDRPDRTGTGTRSVFGHQMRFDLGEGFPLLTTKRLHIRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV IWDEWAD++G+LGP+YG QWRSWPDYDG IDQIS ++ +LR Sbjct: 61 WFLKGDTNIAYLKANGVRIWDEWADENGDLGPVYGAQWRSWPDYDGGTIDQISGVLDTLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P+SRR IVSAWN AL+D MALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPHSRRLIVSAWNPALVDTMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY +H EQA LQL R+P LP + +NP++ DL Sbjct: 181 YALLTHMIAQASGLDVGDFVHTLGDAHLYADHLEQARLQLDRTPGPLPVLKLNPDVRDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F + D + +YE I A +SV Sbjct: 241 AFTFADVAIENYEAQPHIAAPISV 264 >gi|254429983|ref|ZP_05043690.1| thymidylate synthase [Alcanivorax sp. DG881] gi|196196152|gb|EDX91111.1| thymidylate synthase [Alcanivorax sp. DG881] Length = 277 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 168/277 (60%), Positives = 213/277 (76%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV + G+ + DRTG GT + FGYQMR+DLS+GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLRHVRENGTYKEDRTGTGTYAVFGYQMRYDLSQGFPMLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWD WA +GELGP+YG QWRSW DG VIDQIS +++ ++ Sbjct: 61 WFLSGDTNIRYLKENGVSIWDGWATPEGELGPVYGEQWRSWKTPDGGVIDQISEVLEEIK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN A++ K ALPPCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 RNPDSRRLVVSAWNPAVLPDPSISPDANAAAGKQALPPCHCLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GD+FLG+PFNIASY+LLT+M+A V Q G+F+HTLGD HLY+NH EQAD QL+R+P L Sbjct: 181 GDIFLGVPFNIASYALLTLMMAQVCDLQPGDFVHTLGDAHLYSNHLEQADTQLARTPGPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +F ++DFT+ +YEP A I A V++ Sbjct: 241 PTMTLNPAVKDLFAFTFDDFTVSNYEPAAHIKAPVAI 277 >gi|21230261|ref|NP_636178.1| thymidylate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769746|ref|YP_244508.1| thymidylate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|188992959|ref|YP_001904969.1| thymidylate synthase [Xanthomonas campestris pv. campestris str. B100] gi|25091468|sp|Q8PCE7|TYSY_XANCP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|81304300|sp|Q4UR35|TYSY_XANC8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|21111806|gb|AAM40102.1| thymidylate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575078|gb|AAY50488.1| thymidylate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|167734719|emb|CAP52929.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 264 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+HV+++G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLELLQHVLEYGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLQGDTNIAYLKDNQVRIWDEWADANGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP++ DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRPLPTLRLNPDVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED + Y+PH AI A V+V Sbjct: 241 AFRFEDIAIDGYDPHPAIKAPVAV 264 >gi|50954682|ref|YP_061970.1| thymidylate synthase [Leifsonia xyli subsp. xyli str. CTCB07] gi|62901289|sp|Q6AFI0|TYSY_LEIXX RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|50951164|gb|AAT88865.1| thymidylate synthase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 269 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 165/261 (63%), Positives = 197/261 (75%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ GS + DRTG GTRS FG Q+RFDL+ GFPL+TTK+VH+KS+ +ELLWFL Sbjct: 9 YEDLLRDVLANGSHKSDRTGTGTRSVFGRQLRFDLADGFPLITTKRVHFKSIAYELLWFL 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +GVSIWDEWAD+ GELGP+YGVQWRSWP DG IDQI +V +LR DP Sbjct: 69 RGDSNVGWLRENGVSIWDEWADERGELGPVYGVQWRSWPSPDGTHIDQIQQVVDTLRRDP 128 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNVA I MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 129 DSRRIIVSAWNVADIPDMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 188 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT+M+A +G + GEF+ T GDVH+Y+NH EQ + QLSR+P P + + +R Sbjct: 189 LTLMVAQQVGLEPGEFVWTGGDVHIYDNHIEQVNEQLSRNPFPAPALRFARRPESVFDYR 248 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YEDF L Y H AI A V+V Sbjct: 249 YEDFVLEGYRHHPAIRAAVAV 269 >gi|212639286|ref|YP_002315806.1| thymidylate synthase [Anoxybacillus flavithermus WK1] gi|226713165|sp|B7GI39|TYSY_ANOFW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|212560766|gb|ACJ33821.1| Thymidylate synthase [Anoxybacillus flavithermus WK1] Length = 264 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 192/264 (72%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL +++ G + DRTG GT S FG Q+RFDL +GFPLLTTKK+H +S++HELL Sbjct: 1 MKQYLQLLEDILQNGVYKDDRTGTGTLSVFGRQLRFDLREGFPLLTTKKLHIRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV+IWDEWAD+ G+LGP+YG QWRSW DG IDQIS +++ ++ Sbjct: 61 WFLSGDTNIRYLKENGVTIWDEWADEKGDLGPVYGAQWRSWRGADGRTIDQISEVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA +D M LPPCH FQFYV+NG LSC QRS D FLG+PFNIAS Sbjct: 121 TNPNSRRLLVSAWNVAELDHMKLPPCHYAFQFYVENGTLSCMWQQRSVDTFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A Q E I T GDVHLY NH EQA LQL+R PR LP++II + Sbjct: 181 YALLTYMVAQQCDLQPKELIFTGGDVHLYMNHIEQAKLQLTREPRPLPKLIIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y+PH I A VSV Sbjct: 241 EYRFEDFEIVDYDPHPHIKADVSV 264 >gi|226361376|ref|YP_002779154.1| thymidylate synthase [Rhodococcus opacus B4] gi|226239861|dbj|BAH50209.1| thymidylate synthase [Rhodococcus opacus B4] Length = 267 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 156/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR++L+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 8 YEDLLRLVMDTGTPKADRTGTGTRSVFGHQMRWNLADGFPLVTTKKVHLKSIVYELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +GV+IWDEWAD DGELGP+YGVQWRSWP G IDQIS +++L+++P Sbjct: 68 RGDSNVKWLQDNGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQISQTIETLKSNP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 128 DSRRIIVSAWNVGDIPQMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 187 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G + G+FI T GD H+Y+NH +Q QLSR P P + +N + + Sbjct: 188 LTHMVAQQAGLEPGDFIWTGGDCHIYDNHVDQVAEQLSREPLPYPTLKLNRR-DSIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y H AI A V+V Sbjct: 247 FEDVEIVDYRHHPAIKAPVAV 267 >gi|114776706|ref|ZP_01451749.1| thymidylate synthase [Mariprofundus ferrooxydans PV-1] gi|114552792|gb|EAU55223.1| thymidylate synthase [Mariprofundus ferrooxydans PV-1] Length = 277 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 159/277 (57%), Positives = 201/277 (72%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+RHV G+ + DRTG GTRS FG+QMRFDLS GFP++TTKKVH KS++HELL Sbjct: 1 MKSYLDLMRHVRDHGTQKGDRTGTGTRSVFGHQMRFDLSAGFPMVTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N +YL +GVSIW+EWA +DG LGP+YG QWR+WP G IDQIS +++ ++ Sbjct: 61 WFLKGETNTAYLSENGVSIWNEWATEDGSLGPVYGYQWRNWPTPSGESIDQISELIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 A P SRR IVSAWNVA + KMAL PCH FQFYV +GKLSCQLYQRS Sbjct: 121 ARPNSRRLIVSAWNVADLPDESISPQANVAEGKMALAPCHAFFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V + G+FIHT GD HLY+NH EQ + QL+R L Sbjct: 181 ADIFLGVPFNIASYALLTMMIAQVCELEPGDFIHTFGDAHLYSNHTEQVETQLARECYPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + ++ F Y+DF L Y+ H I A +++ Sbjct: 241 PTMKLNPAVKNIFDFTYDDFELSDYQCHPGIRAPIAI 277 >gi|325928230|ref|ZP_08189435.1| thymidylate synthase [Xanthomonas perforans 91-118] gi|325541390|gb|EGD12927.1| thymidylate synthase [Xanthomonas perforans 91-118] Length = 264 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 158/264 (59%), Positives = 207/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL+HV++ G+++ DRTG GTRS FG+QMRF L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFHLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD +G+LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NG+LSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGRLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ED ++ Y+PH AI A V+V Sbjct: 241 AFRFEDISIEGYDPHPAIKAPVAV 264 >gi|257092198|ref|YP_003165839.1| Thymidylate synthase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044722|gb|ACV33910.1| Thymidylate synthase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 273 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 164/273 (60%), Positives = 209/273 (76%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HV++ G + DRTG GTRS FG+QMRFDL+ GFPLLTTKK+H +S++HELL Sbjct: 1 MQQYLDLMHHVLEHGVSKADRTGTGTRSVFGWQMRFDLAAGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL +GV IWDEWAD++G+LGP+YG QWR W DG IDQI+ +V +L+ Sbjct: 61 WFLRGDTNVRYLQENGVRIWDEWADENGDLGPVYGRQWRHWQAADGREIDQIAQLVDNLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---------DNGKLSCQLYQRSGDVF 171 +P SRRH+++AWN +++MALPPCH L QFYV +LSCQLYQRS D+F Sbjct: 121 KNPDSRRHLLTAWNPGDVERMALPPCHALCQFYVAPASASATDRRPQLSCQLYQRSADIF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V ++ G+F+HT GD HLY NHF+QA LQL+R+ R LP M Sbjct: 181 LGVPFNIASYALLTMMVAQVCNYRPGDFVHTFGDAHLYGNHFDQARLQLTRATRALPTMR 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +NP + DL +FR+EDFTL Y+PH I A V+V Sbjct: 241 LNPEVDDLFAFRFEDFTLEGYDPHPHIAAAVAV 273 >gi|298372619|ref|ZP_06982609.1| thymidylate synthase [Bacteroidetes oral taxon 274 str. F0058] gi|298275523|gb|EFI17074.1| thymidylate synthase [Bacteroidetes oral taxon 274 str. F0058] Length = 264 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 162/264 (61%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL ++ G++R DRTG GT FG+QMRFDL +GFPLLTTKK+H KS+++ELL Sbjct: 1 MKQYHDLLNRILNEGTERSDRTGTGTIGIFGHQMRFDLRQGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL +GVSIW+EWAD +G+LG IYG QWRSW YDG IDQIS ++++ Sbjct: 61 WFLKGDTNVRYLQDNGVSIWNEWADANGDLGHIYGYQWRSWRGYDGETIDQISEAEETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DPYSRR IV+AWNV + M LPPCH FQFYV NGKLS Q+YQRS DVFLG+PFNIAS Sbjct: 121 NDPYSRRIIVNAWNVGDLKNMNLPPCHTFFQFYVANGKLSLQMYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G + GEF+HTLGD H+Y NH EQ LQL+R PR LP+M IN + + Sbjct: 181 YALLLQMMAQTTGLEAGEFVHTLGDAHIYKNHLEQVQLQLTREPRPLPKMNINKEVRSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y+P+ I KV+V Sbjct: 241 DFRYEDFCLTDYDPYPHIAGKVAV 264 >gi|49474436|ref|YP_032478.1| thymidylate synthase [Bartonella quintana str. Toulouse] gi|62901308|sp|Q6FZ91|TYSY_BARQU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|49239940|emb|CAF26342.1| Thymidylate synthase [Bartonella quintana str. Toulouse] Length = 264 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 180/264 (68%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRFDL GFPLLTTKK+H +S+++ELL Sbjct: 1 MKTYLDLLSHVLNKGIDRTDRTGVGTRSVFGYQMRFDLQIGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV++L HGVSIWDEWAD+ G LGPIYG QWRSWP DG IDQIS ++ ++ Sbjct: 61 WFLRGDTNVAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPASDGRYIDQISRLLTMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN ALI++MALPPCHC FQFYV + KLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KTPDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADDKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA QLSR P LP M+INP++ DL Sbjct: 181 YALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRIPNALPSMLINPSVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +YE I A V+V Sbjct: 241 SFKFEDFELLNYEAQPHIKAPVAV 264 >gi|88812437|ref|ZP_01127686.1| thymidylate synthase [Nitrococcus mobilis Nb-231] gi|88790223|gb|EAR21341.1| thymidylate synthase [Nitrococcus mobilis Nb-231] Length = 277 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 164/277 (59%), Positives = 205/277 (74%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LLRHV+ G + DRTG GT S FGYQMRFDL +G PLLTTK++H +S+VHELL Sbjct: 1 MKQYLELLRHVLHQGVRKSDRTGTGTLSVFGYQMRFDLQQGLPLLTTKRLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L G+SN+ YL +GVSIWDEWAD++GELGPIYG QWR WP DG+ IDQI+ ++ ++ Sbjct: 61 WLLSGESNIGYLKENGVSIWDEWADENGELGPIYGPQWRKWPAQDGSTIDQITDVIDGIK 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRRHIVSAWNVA + + MALP CH LFQFYV +GKLSCQLYQRS Sbjct: 121 QNPNSRRHIVSAWNVAYLPEESLSPQANVAQGRMALPACHALFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLT M+A G G+F+ T GDVH+Y+NH EQA LQLSR+PR L Sbjct: 181 CDVFLGVPFNIASYALLTHMIAQECGLAPGDFVWTGGDVHVYSNHLEQARLQLSRAPRPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++II + ++ Y+DF + Y+PH AI A ++V Sbjct: 241 PKLIIKRKPDSIFNYCYDDFEIVGYDPHPAIKAPIAV 277 >gi|146299231|ref|YP_001193822.1| thymidylate synthase [Flavobacterium johnsoniae UW101] gi|189036934|sp|A5FJV8|TYSY_FLAJO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|146153649|gb|ABQ04503.1| thymidylate synthase [Flavobacterium johnsoniae UW101] Length = 283 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 165/286 (57%), Positives = 210/286 (73%), Gaps = 25/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYLDLVKHVLENGNQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IWDEWAD +G+LGP+YG QWR+W + IDQIS ++ L+ Sbjct: 61 WFLKGDTNIKYLKENGVKIWDEWADSNGDLGPVYGHQWRNW---NSEEIDQISELITELK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVD---------NGK 158 +P SRR IVSAWN +++ K ALPPCH FQFYV GK Sbjct: 118 TNPNSRRMIVSAWNPSVLPDTKKSFEENVANNKAALPPCHAFFQFYVASPDLEKGETKGK 177 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQLYQRS D+FLG+PFNIASY+LLTMM+A V + GEFIHT GD H+YNNHFEQ +L Sbjct: 178 LSCQLYQRSADIFLGVPFNIASYALLTMMIAQVCDLEPGEFIHTFGDAHIYNNHFEQLEL 237 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QLSR P+ LP+MI+NP I ++ F Y+DFTL Y+PH AI V+V Sbjct: 238 QLSREPKPLPKMILNPEIKNIFDFDYDDFTLVDYDPHPAIQGSVAV 283 >gi|255077932|ref|XP_002502546.1| bifunctional dihydrofolate reductase-thymidylate synthase [Micromonas sp. RCC299] gi|226517811|gb|ACO63804.1| bifunctional dihydrofolate reductase-thymidylate synthase [Micromonas sp. RCC299] Length = 523 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 128/282 (45%), Positives = 180/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL++ +++ G+ + DRTG GT S FG QMRFDL + FPLLTTK+V W+ V EL+WF Sbjct: 242 QYLDLIKEIMEEGNVKGDRTGTGTISKFGCQMRFDLRRSFPLLTTKRVFWRGVAEELIWF 301 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 ++G ++ L + IWD ++G+LGP+YG QWR + Sbjct: 302 VKGCTSAKELQDKDIHIWDGNGSREYLDSVGLGHREEGDLGPVYGFQWRHFGAEYKDMHA 361 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ++ ++ ++ +P RR +++AWN A + +MALPPCH QFYV NG+LSCQ Sbjct: 362 DYTGQGVDQLAEVIDKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSCQ 421 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H GD H+Y+NH E QL Sbjct: 422 MYQRSCDMGLGVPFNIASYSLLTCMVAQVCGLKPGDFVHCCGDTHVYSNHVEPLYKQLEN 481 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P + INP D+ SF + DF + Y+PH I +++V Sbjct: 482 EPRPFPTLKINPEKKDIDSFEFSDFEIVDYDPHPKIAMQMAV 523 >gi|325922408|ref|ZP_08184177.1| thymidylate synthase [Xanthomonas gardneri ATCC 19865] gi|325547105|gb|EGD18190.1| thymidylate synthase [Xanthomonas gardneri ATCC 19865] Length = 264 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 205/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + V IWDEWAD DG LGP+YG QWR W DG IDQ+ +V ++ Sbjct: 61 WFLQGDTNIGYLKDNQVRIWDEWADADGNLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR ++SAWNV + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY+NHFEQA QL+R+PR LP + +NP + DL Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +FR+ D + Y+PH AI A V+V Sbjct: 241 AFRFADIAIDGYDPHPAIKAPVAV 264 >gi|54026996|ref|YP_121238.1| thymidylate synthase [Nocardia farcinica IFM 10152] gi|62901241|sp|Q5YPL7|TYSY_NOCFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54018504|dbj|BAD59874.1| putative thymidylate synthase [Nocardia farcinica IFM 10152] Length = 266 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 166/263 (63%), Positives = 198/263 (75%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY DLLR V+ G+ + DRTG GTRS FG+Q+R+DLS GFPL+TTKKVH KS+V+ELLW Sbjct: 5 RQYEDLLRLVLDTGTAKGDRTGTGTRSIFGHQLRYDLSAGFPLITTKKVHLKSIVYELLW 64 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGDSNV +L HGV+IWDEWAD GELGP+YGVQWRSWP DG IDQIS ++Q+LR Sbjct: 65 FLRGDSNVGWLREHGVTIWDEWADPQGELGPVYGVQWRSWPTPDGTHIDQISQVLQTLRT 124 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IVSAWNVA +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY Sbjct: 125 DPDSRRMIVSAWNVAELDRMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASY 184 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A + GEFI T GD H+Y+NH EQ QL R P P++ + P L Sbjct: 185 ALLTHMVAQQTELEPGEFIWTGGDCHIYDNHVEQVTEQLGREPYPFPRLELRPAP-SLFD 243 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 +R+ED T+ Y H AI A V+V Sbjct: 244 YRFEDVTVTDYRHHPAIKAPVAV 266 >gi|145588568|ref|YP_001155165.1| thymidylate synthase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189036940|sp|A4SVT7|TYSY_POLSQ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145046974|gb|ABP33601.1| thymidylate synthase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 264 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 151/264 (57%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L++ V+ G + DRTG GT S FG+QMRF+L+ GFP++TTKK+H KS+V+ELL Sbjct: 1 MRQYHNLMKEVLAKGVQKSDRTGTGTISVFGHQMRFNLADGFPMVTTKKLHMKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G ++ ++L GVSIW+EWA DG+LGPIYG QWRSWP +G IDQIS +V++++ Sbjct: 61 WFLKGSTDNNWLKERGVSIWNEWAAPDGDLGPIYGYQWRSWPAPNGQHIDQISEVVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRIIVSAWNVADIPRMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+FI T GD HLY+NH EQ DLQLSR LP++ I L Sbjct: 181 YALLTHMVAQQCNLEVGDFIWTGGDCHLYSNHLEQVDLQLSRDFLPLPKLNILRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + YE H I A V++ Sbjct: 241 DYEFEDFEIVGYESHPHIKAPVAI 264 >gi|302529833|ref|ZP_07282175.1| thymidylate synthase [Streptomyces sp. AA4] gi|302438728|gb|EFL10544.1| thymidylate synthase [Streptomyces sp. AA4] Length = 265 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 161/262 (61%), Positives = 203/262 (77%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL+HV+ G+++ DRTG GTRS FG+Q+R+ L+ GFPL+TTKKVH++S+ +ELLWF Sbjct: 5 QYEDLLQHVLDTGAEKGDRTGTGTRSIFGHQLRYRLADGFPLITTKKVHFRSIAYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV++L HGV+IWDEWA DG+LGP+YGVQWRSWP DG +DQIS ++++LR + Sbjct: 65 LRGDSNVTWLRDHGVTIWDEWAAPDGDLGPVYGVQWRSWPTPDGGHVDQISDVLRTLREN 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV I +MALPPCH FQFYV NG+LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRIIVSAWNVGDIPQMALPPCHAFFQFYVANGELSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A +G + G+FI T GD H+Y+NH EQ QLSR R P + + P L + Sbjct: 185 LLTHMIADQVGLRVGDFIWTGGDCHIYDNHVEQVRKQLSRDARPFPTLSLKPA-ESLFDY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 RYEDF+L Y+PH I A V+V Sbjct: 244 RYEDFSLEGYDPHPGIKAPVAV 265 >gi|148361180|ref|YP_001252387.1| thymidylate synthase [Legionella pneumophila str. Corby] gi|296108515|ref|YP_003620216.1| thymidylate synthase [Legionella pneumophila 2300/99 Alcoy] gi|166231709|sp|A5II41|TYSY_LEGPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148282953|gb|ABQ57041.1| thymidylate synthase (TS) [Legionella pneumophila str. Corby] gi|295650417|gb|ADG26264.1| thymidylate synthase [Legionella pneumophila 2300/99 Alcoy] Length = 264 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL Sbjct: 1 MKTYLQLLEHILQQGVEKSDRTGTGTLSVFGYQMRFDLTKGFPLVTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD +G+LGP+YG QWRSWP DG+ IDQ+S +VQ ++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGHTIDQLSDVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A EFI T GD HLY NH EQA +QL+R P LP + I L Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLTIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +Y+ H AI A ++V Sbjct: 241 DYAYEDFEFVNYQSHPAIKAPIAV 264 >gi|284033838|ref|YP_003383769.1| thymidylate synthase [Kribbella flavida DSM 17836] gi|283813131|gb|ADB34970.1| thymidylate synthase [Kribbella flavida DSM 17836] Length = 263 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 198/264 (75%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL HV+ G ++ DRTG GT S FG+Q R+DLS GFP++TTKK+H KSVV EL+ Sbjct: 1 MRQYLELLDHVLTHGVEKGDRTGTGTLSVFGHQARYDLSAGFPVVTTKKLHLKSVVGELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G ++V +L +G+SIWDEWA DGELGP+YG QWRSWP DG +DQI+ +++++R Sbjct: 61 WFLSGSTSVKWLQENGISIWDEWAGDDGELGPVYGYQWRSWPTPDGRHVDQIAGVIEAIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRH+VSAWNVA +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRHLVSAWNVAELDDMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G G+F+HTLGD HLY NH +QA LQL+R PR LP + + + Sbjct: 181 YALLTHMVAQQTGLAVGDFVHTLGDAHLYLNHVDQAKLQLTREPRPLPTLRL-RERDSID 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 S+ D L Y+PH I A ++V Sbjct: 240 SYEIADVELIGYDPHPGIKAPIAV 263 >gi|303275197|ref|XP_003056897.1| bifunctional dihydrofolate reductase-thymidylate synthase [Micromonas pusilla CCMP1545] gi|226461249|gb|EEH58542.1| bifunctional dihydrofolate reductase-thymidylate synthase [Micromonas pusilla CCMP1545] Length = 524 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 132/282 (46%), Positives = 180/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL+R +I+ G+ + DRTG GT S FG MRFDL + FPLLTTK+V W+ V ELLWF Sbjct: 243 QYLDLIRDIIESGNVKGDRTGTGTISKFGTSMRFDLRRSFPLLTTKRVFWRGVAEELLWF 302 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 + G +N L + IWD ++ +LGP+YG QWR + Sbjct: 303 VGGRTNAKELQDKDIHIWDGNGSREYLDSVGLSHREEQDLGPVYGFQWRHFGAEYTDMHA 362 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +YDG +DQ++ ++ ++ +P RR +++AWN A + +MALPPCH QFYV NG+LSCQ Sbjct: 363 NYDGKGVDQLAEVIDKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSCQ 422 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H +GD H+Y+NH E QL Sbjct: 423 MYQRSCDMGLGVPFNIASYSLLTCMIAQVCGLKPGDFVHVMGDTHVYSNHVEPLKKQLLC 482 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P + INP D+ SF + DFT+ Y+PH I K++V Sbjct: 483 EPRPFPTLKINPAKTDIDSFEFSDFTIEGYDPHPKIEMKMAV 524 >gi|269795625|ref|YP_003315080.1| thymidylate synthase [Sanguibacter keddieii DSM 10542] gi|269097810|gb|ACZ22246.1| thymidylate synthase [Sanguibacter keddieii DSM 10542] Length = 271 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 154/262 (58%), Positives = 197/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLRHV+ G+ + DRTG GTRS FG+QMRFDLS+GFPL+TTK+VH +SVV ELLWF Sbjct: 11 QYEDLLRHVMAHGTRKSDRTGTGTRSVFGHQMRFDLSEGFPLVTTKRVHLRSVVGELLWF 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L +GV IW+EWAD DGELGP+YGVQWRSWP DG +DQ++ ++++LR + Sbjct: 71 LRGDSNVGWLQENGVRIWNEWADDDGELGPVYGVQWRSWPTPDGQHVDQVAQVLETLRTN 130 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA +D MAL PCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 131 PDSRRMIVSAWNVADLDAMALMPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYA 190 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A +G + G+F+ T GD H+Y+NH +Q L R P P++ + L + Sbjct: 191 LLTHMVAQQVGLEVGDFVWTGGDCHVYDNHVDQVAELLGREPYPFPRLEL-RQAASLFDY 249 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 ++D T+ Y+ H I A V+V Sbjct: 250 TFDDVTVEGYQHHPTIPAPVAV 271 >gi|171463169|ref|YP_001797282.1| Thymidylate synthase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192707|gb|ACB43668.1| Thymidylate synthase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 264 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 149/264 (56%), Positives = 192/264 (72%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ V+ G + DRTG GT S FG+QMRF+L GFP++TTKK+H KS+++ELL Sbjct: 1 MRQYHDLMKEVLTKGVQKSDRTGTGTVSVFGHQMRFNLLDGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N ++L GVSIW+EWA DG+LGPIYG QWRSWP +G IDQIS +V++++ Sbjct: 61 WFLKGSTNNNWLKERGVSIWNEWAAPDGDLGPIYGYQWRSWPTPNGQHIDQISEVVETIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFN AS Sbjct: 121 KNPDSRRIIVSAWNVADIPRMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNTAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT ++A + G+FI T GD HLY+NH EQ DLQLSR LP++ I + Sbjct: 181 YALLTHIMAQQCNLEVGDFIWTGGDCHLYSNHLEQVDLQLSRDFFPLPKLNILRKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + YE H I A V++ Sbjct: 241 EYEFEDFEITGYESHPHIKAPVAI 264 >gi|329911715|ref|ZP_08275594.1| Thymidylate synthase [Oxalobacteraceae bacterium IMCC9480] gi|327545812|gb|EGF30934.1| Thymidylate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 264 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD +RHV + G+++ DRTG GTRS FGYQMRF L GFPLLTTKK+H KS++HEL+ Sbjct: 1 MRQYLDFMRHVQQHGTEKTDRTGTGTRSVFGYQMRFALQDGFPLLTTKKLHLKSILHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N++YL +GVSIWD+WAD DG LGPIYG QWRSWP DG+ IDQI+ ++ ++ Sbjct: 61 WFLNGATNIAYLKENGVSIWDDWADADGNLGPIYGYQWRSWPTPDGSHIDQITQVMDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNVA I M LPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPDSRRMIVSAWNVADIPNMKLPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + G+F+ T GD HLY+NH EQ DLQL+R+P+ LP ++I + Sbjct: 181 YALLTHMMAQQAGLEVGDFVWTGGDCHLYSNHMEQVDLQLTRTPQALPTLVIKRKPASIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R+EDF + Y P A I A V+V Sbjct: 241 DYRFEDFEITGYTPDAHIKAPVAV 264 >gi|254292830|ref|YP_003058853.1| thymidylate synthase [Hirschia baltica ATCC 49814] gi|254041361|gb|ACT58156.1| thymidylate synthase [Hirschia baltica ATCC 49814] Length = 264 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 204/264 (77%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ V+ G +R DRTG GT+ FG QMRFDLS+ FP+LTTKK+H +S++ ELL Sbjct: 1 MRQYLDLLQDVLDNGVERGDRTGTGTKGVFGRQMRFDLSETFPILTTKKLHLRSIIIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSW DG VIDQIS ++ ++ Sbjct: 61 WFLKGDTNIKYLTDNKVSIWDEWADENGDLGPVYGKQWRSWAAPDGRVIDQISWVLNEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPNSRRLIVSAWNPADVNDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A G + GEF+H+ GD HLY NH EQA LQL+R + LP M +NP+ DL Sbjct: 181 YALLTMMMARATGLEAGEFVHSFGDAHLYMNHIEQAKLQLTRDTKQLPIMTLNPDKTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDFTL YE H I A ++V Sbjct: 241 GWDYEDFTLHGYEAHPTIKAPIAV 264 >gi|312138557|ref|YP_004005893.1| thymidylate synthase [Rhodococcus equi 103S] gi|311887896|emb|CBH47208.1| thymidylate synthase [Rhodococcus equi 103S] Length = 273 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 156/261 (59%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR+DL++GFPL+TTKKVH KS+V+ELLWFL Sbjct: 14 YEDLLRLVMDTGTAKADRTGTGTRSVFGHQMRWDLAEGFPLITTKKVHLKSIVYELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L HGV+IWDEWAD DGELGP+YGVQWRSWP G IDQI+ ++++L+ +P Sbjct: 74 RGESNVKWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITKVIETLKTNP 133 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNVA +D MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 134 DSRRIIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 193 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A + G+FI T GD H+Y+NH +Q QLSR P P + +N + + Sbjct: 194 LTHMVAQQADLEVGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLN-KRDSIFDYT 252 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y H AI A V+V Sbjct: 253 FEDVEIVDYRHHPAIKAPVAV 273 >gi|302383585|ref|YP_003819408.1| thymidylate synthase [Brevundimonas subvibrioides ATCC 15264] gi|302194213|gb|ADL01785.1| thymidylate synthase [Brevundimonas subvibrioides ATCC 15264] Length = 288 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 165/262 (62%), Positives = 201/262 (76%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LLR ++ G R DRTG GT FG QMRFDLSKGFPLLTTKK+H +S++ ELLWF Sbjct: 28 QYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPLLTTKKLHLRSIIVELLWF 87 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG++N+ +L +G SIWDEWAD+ GELGP+YG QWRSW +G IDQI+ +++ L+ + Sbjct: 88 LRGETNIRWLKDNGCSIWDEWADESGELGPVYGKQWRSWAAPNGESIDQIARLIEGLKTN 147 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRRHIVSAWN A I+ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 148 PNSRRHIVSAWNPADIEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 207 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLTMM+A V+G + G+F+HT GD HLY+NH EQA LQL+R P LP M I P DL +F Sbjct: 208 LLTMMVAEVVGLEPGDFVHTFGDAHLYSNHIEQAQLQLTRQPLALPTMTIAPK-RDLFAF 266 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 DF L YE H I A V++ Sbjct: 267 EPGDFVLSGYEAHPHIKAAVAI 288 >gi|229496508|ref|ZP_04390222.1| thymidylate synthase [Porphyromonas endodontalis ATCC 35406] gi|229316405|gb|EEN82324.1| thymidylate synthase [Porphyromonas endodontalis ATCC 35406] Length = 265 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 176/265 (66%), Positives = 210/265 (79%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+ ++ G+ R DRTG GT+S FG+QMRFDL GFPLLTTKK+H KS+++ELL Sbjct: 1 MRQYLELLQKIMDEGTLRSDRTGTGTKSIFGHQMRFDLEDGFPLLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD-GNVIDQISSIVQSL 119 WFLRGDSNV+YL HGVSIWDEWAD +G LGPIYGVQWRSWP Y+ G DQI+ +V+ + Sbjct: 61 WFLRGDSNVAYLQEHGVSIWDEWADPEGNLGPIYGVQWRSWPSYNQGEAYDQIAQVVEDI 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWNVA ID+MALPPCHCL QFYV NG+LS QLYQRSGDVFLG+PFNIA Sbjct: 121 RTSPDSRRLMVSAWNVAQIDQMALPPCHCLMQFYVANGRLSLQLYQRSGDVFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LL MM+A V G + G F+HTLGD HLY NH EQ LQL+RSPRTLP M +NP + +L Sbjct: 181 SYALLLMMVAQVTGLKPGTFVHTLGDAHLYCNHLEQTALQLTRSPRTLPTMQLNPEVRNL 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y PH I A ++V Sbjct: 241 EDFKFEDFKLLDYTPHPHIAAPIAV 265 >gi|319407478|emb|CBI81128.1| Thymidylate synthase [Bartonella sp. 1-1C] Length = 264 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 177/264 (67%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRF+L GFPLLTTKK+H +S+++ELL Sbjct: 1 MKAYLDLLFHVLNDGIDRFDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADK G+LGPIYG QWRSWP DG IDQI +++ ++ Sbjct: 61 WFLKGDTNITWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTPDGRHIDQIKNLLAMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +PYSRR IVSAWN A I++MALPPCHCLFQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPYSRRLIVSAWNPAAIEEMALPPCHCLFQFYVAAGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A + Q G+FIHTLGD HLY NHFEQA+ QLSR+P+ LP M+INP + +L Sbjct: 181 YALLTMMIAQINHLQVGDFIHTLGDAHLYLNHFEQAEQQLSRTPKALPTMLINPEVKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF ++DF L +YE I A V+V Sbjct: 241 SFTFKDFELLNYEAFPHIKAPVAV 264 >gi|49475832|ref|YP_033873.1| thymidylate synthase [Bartonella henselae str. Houston-1] gi|62901309|sp|Q6G2S8|TYSY_BARHE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|49238640|emb|CAF27884.1| Thymidylate synthase [Bartonella henselae str. Houston-1] Length = 264 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 178/264 (67%), Positives = 209/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRFDL GFPLLTTKK+H +S+++ELL Sbjct: 1 MKTYLDLLSHVLNKGIDRTDRTGVGTRSVFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+++L HGVSIWDEWAD+ G LGPIYG QWRSWP DG IDQIS+++ ++ Sbjct: 61 WFLRGDTNIAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPAPDGRHIDQISNLLMMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A I +MALPPCHC FQFYV +GKLSCQLYQRS D+FLGIPFNIAS Sbjct: 121 KTPDSRRLIVSAWNPASIKEMALPPCHCFFQFYVADGKLSCQLYQRSADIFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA QLSR P LP M INP + DL Sbjct: 181 YALLTMMIAQVSGLKVGDFIHTLGDAHLYSNHFEQAQHQLSRIPNALPFMRINPAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +Y+ I A ++V Sbjct: 241 SFKFEDFELLNYDAQPHIKAPIAV 264 >gi|254784598|ref|YP_003072026.1| thymidylate synthase [Teredinibacter turnerae T7901] gi|259550813|sp|C5BMA3|TYSY_TERTT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|237686344|gb|ACR13608.1| thymidylate synthase [Teredinibacter turnerae T7901] Length = 277 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 162/277 (58%), Positives = 201/277 (72%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+RHV G + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL Sbjct: 1 MKQYLELMRHVRDNGVRKEDRTGTGTVSVFGYQMRFDLSQGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N++YL+ +GV IWD WA + G+LGPIYG QWRSWP +G +DQIS +++ ++ Sbjct: 61 WFLNGETNIAYLNNNGVKIWDAWATESGDLGPIYGAQWRSWPAQNGETLDQISQLIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR I+SAWN AL+ KMALPPCH LFQFYV G+LSCQLYQRS Sbjct: 121 HKPDSRRLIISAWNPALLPDESISPQDNVRNGKMALPPCHTLFQFYVLEGRLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G G+F+HT GD HLY NH EQ D QL R P L Sbjct: 181 ADIFLGVPFNIASYALLTMMIAQVTGLAPGDFVHTFGDAHLYLNHLEQVDTQLQRQPLPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP + D+ F ++DF L++Y+ H I A +SV Sbjct: 241 PTMAINPAVKDIFGFCFDDFELQNYQAHPHIAAPISV 277 >gi|333029205|ref|ZP_08457266.1| Thymidylate synthase [Bacteroides coprosuis DSM 18011] gi|332739802|gb|EGJ70284.1| Thymidylate synthase [Bacteroides coprosuis DSM 18011] Length = 264 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ V G+ + DRTG GT S FG+QMRF+++ GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLQRVKSEGAKKEDRTGTGTISVFGHQMRFNMADGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV+YL HGV IW+EWAD +G LGPIYG QWRSWP Y+G DQI ++ ++ Sbjct: 61 WFLNGDTNVTYLQDHGVRIWNEWADSNGNLGPIYGYQWRSWPGYNGETFDQIKEAIRMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWNV I +M LPPCH LFQFYV NGKLS QLYQRS D+FLG+PFNIAS Sbjct: 121 ETPDSRRILVSAWNVGCISEMKLPPCHILFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G + GEFIHTLGD H+YNNH EQ DLQL+R PR LP+M INP + ++ Sbjct: 181 YALLLQMVAQVTGLEAGEFIHTLGDAHIYNNHLEQVDLQLTREPRKLPKMHINPRVKEID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y P+ I KVSV Sbjct: 241 QFKFEDFELTDYNPYPHIPGKVSV 264 >gi|319404485|emb|CBI78092.1| Thymidylate synthase [Bartonella rochalimae ATCC BAA-1498] Length = 264 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 174/264 (65%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRF+L GFPLLTTKK+H +S+++ELL Sbjct: 1 MKAYLDLLFHVLNNGIDRFDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+++L HGVSIWDEWADK G+LGPIYG QWRSWP DG IDQI +++ ++ Sbjct: 61 WFLKGDTNITWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTSDGRHIDQIKNLLAMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DPYSRR +VSAWN A I++MALPPCHCLFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KDPYSRRLVVSAWNPAAIEEMALPPCHCLFQFYVAAGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A + Q G+FIHT+GD HLY NHFEQA QLSR+P+ LP M+INP + +L Sbjct: 181 YALLTMMIAQINHLQVGDFIHTIGDAHLYLNHFEQAKQQLSRTPKALPTMLINPEVKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+++DF L +YE I A V+V Sbjct: 241 SFKFKDFELLNYEAFPHIKAPVAV 264 >gi|16126363|ref|NP_420927.1| thymidylate synthase [Caulobacter crescentus CB15] gi|221235145|ref|YP_002517581.1| thymidylate synthase [Caulobacter crescentus NA1000] gi|25091488|sp|Q9A6H0|TYSY_CAUCR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|13423613|gb|AAK24095.1| thymidylate synthase [Caulobacter crescentus CB15] gi|220964317|gb|ACL95673.1| thymidylate synthase [Caulobacter crescentus NA1000] Length = 279 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 165/263 (62%), Positives = 206/263 (78%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL LL +++ G R DRTG GT FG Q+RFDL+KGFP+LTTKK+H +S++ ELLW Sbjct: 18 RQYLTLLADILENGVQRGDRTGTGTLGVFGRQIRFDLAKGFPVLTTKKLHLRSIIIELLW 77 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+GD+N++YL +GV IWDEWAD++G+LGP+YG QWRSW DG VIDQIS++V++L+A Sbjct: 78 FLKGDTNIAYLKDNGVRIWDEWADENGDLGPVYGKQWRSWATPDGRVIDQISALVENLKA 137 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRRHIV+AWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 138 NPNSRRHIVTAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASY 197 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT+M+A V+G + GEF+HT GD HLY NH +QA QL+R P P M I + DL Sbjct: 198 ALLTLMVAKVVGLEPGEFVHTFGDAHLYLNHLDQAREQLTREPFDFPTMKIA-DKRDLFG 256 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 F YEDFTL Y+ H I A+VSV Sbjct: 257 FEYEDFTLEGYQAHPHIKAEVSV 279 >gi|54298860|ref|YP_125229.1| thymidylate synthase [Legionella pneumophila str. Paris] gi|62901234|sp|Q5X119|TYSY_LEGPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|53752645|emb|CAH14080.1| Thymidylate synthase [Legionella pneumophila str. Paris] Length = 264 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 199/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL Sbjct: 1 MKTYLQLLEHILQQGVEKSDRTGTGTLSVFGYQMRFDLTKGFPLVTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+SYL +GV+IWDEWAD +G+LGP+YG QWRSWP DG+ IDQ+S +VQ ++ Sbjct: 61 WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGHTIDQLSDVVQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IVSAWNV +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A EFI T GD HLY NH EQA +QL+R P LP + I L Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLTIKRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YEDF +Y+ H AI A ++V Sbjct: 241 DYAYEDFEFLNYQSHPAIKAPIAV 264 >gi|332519885|ref|ZP_08396349.1| thymidylate synthase [Lacinutrix algicola 5H-3-7-4] gi|332044444|gb|EGI80638.1| thymidylate synthase [Lacinutrix algicola 5H-3-7-4] Length = 274 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 154/277 (55%), Positives = 210/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHELVKHVLENGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GV IW+ WAD+ G+LGP+YG QWR+W + +DQI+ ++++L+ Sbjct: 61 WFLKGDTNINYLTENGVKIWNSWADEKGDLGPVYGHQWRNWNSDE---VDQITEVIETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G+Q GEFIHT GD H+YNNH EQ +LQ++R R L Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCGYQAGEFIHTFGDAHIYNNHVEQLELQMTRDCRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP + D+ F++EDFTL Y PH I V+V Sbjct: 238 PKMKLNPEVKDIFEFKFEDFTLEDYNPHPHIKGAVAV 274 >gi|167647347|ref|YP_001685010.1| thymidylate synthase [Caulobacter sp. K31] gi|167349777|gb|ABZ72512.1| Thymidylate synthase [Caulobacter sp. K31] Length = 283 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 158/263 (60%), Positives = 201/263 (76%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+LL +++ G +R DRTG GT+ FG Q+RFDLS+GFP+LTTKK+H +S++ ELLW Sbjct: 22 RQYLNLLADILENGVERGDRTGTGTKGVFGRQIRFDLSQGFPVLTTKKLHLRSIIVELLW 81 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGD+NV YL +G IWDEWAD++G+LGP+YG QWRSW +G IDQI ++++ L+ Sbjct: 82 FLRGDTNVKYLQDNGCKIWDEWADENGDLGPVYGKQWRSWATPNGQSIDQIQNLIEGLKT 141 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRRHIVSAWN A ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 142 NPNSRRHIVSAWNPADVEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASY 201 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT+M+A V+G + GEF+HT GD HLY NH +QA QL R P+ P + + N DL + Sbjct: 202 ALLTLMVAQVVGLKPGEFVHTFGDAHLYMNHLDQAREQLQREPKPFPTLKMA-NKRDLFA 260 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 F Y DF L YE H I A V+V Sbjct: 261 FEYADFQLEGYEAHPHIKAAVAV 283 >gi|332527154|ref|ZP_08403229.1| thymidylate synthase [Rubrivivax benzoatilyticus JA2] gi|332111580|gb|EGJ11562.1| thymidylate synthase [Rubrivivax benzoatilyticus JA2] Length = 273 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 159/262 (60%), Positives = 192/262 (73%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT+S FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF Sbjct: 12 QYEDFMRHVDTTGVHKSDRTGTGTKSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD N +L GV+IWDEWA +DG+LGP+YGVQWRSWP DG +DQI+ V+ L+ D Sbjct: 72 LRGDGNARWLQERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHVDQIAEAVRLLKTD 131 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNVA + KMAL PCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 132 PDSRRIVVSAWNVAELPKMALMPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIASYA 191 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLTMM+A Q G+FI T GD HLY+NH EQ QL+R+P P M I + + Sbjct: 192 LLTMMMAQQCDLQLGDFIWTGGDCHLYSNHAEQVRTQLARTPFPYPTMEIRRRPASIFDY 251 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YEDF L Y+ H AI A V+V Sbjct: 252 EYEDFVLHDYQHHPAIKAPVAV 273 >gi|254780956|ref|YP_003065369.1| thymidylate synthase [Candidatus Liberibacter asiaticus str. psy62] gi|254040633|gb|ACT57429.1| thymidylate synthase [Candidatus Liberibacter asiaticus str. psy62] Length = 264 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 264/264 (100%), Positives = 264/264 (100%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL Sbjct: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR Sbjct: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS Sbjct: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL Sbjct: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFRYEDFTLRSYEPHAAILAKVSV Sbjct: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 >gi|111019241|ref|YP_702213.1| thymidylate synthase [Rhodococcus jostii RHA1] gi|123046371|sp|Q0SEI1|TYSY_RHOSR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|110818771|gb|ABG94055.1| thymidylate synthase [Rhodococcus jostii RHA1] Length = 266 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 154/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GT+S FG+QMR++L+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 7 YEDLLRLVMDTGTPKADRTGTGTKSVFGHQMRWNLADGFPLITTKKVHLKSIVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +GV+IWDEWAD DGELGP+YGVQWRSWP G IDQI+ +++L+++P Sbjct: 67 RGDSNVKWLQDNGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITQTIETLKSNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGDIPQMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G + G+FI T GD H+Y+NH +Q QLSR P P + +N + + Sbjct: 187 LTHMVAQQAGLEPGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLN-KRESIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y H AI A V+V Sbjct: 246 FEDVEIVDYRHHPAIKAPVAV 266 >gi|325676379|ref|ZP_08156058.1| thymidylate synthase [Rhodococcus equi ATCC 33707] gi|325552940|gb|EGD22623.1| thymidylate synthase [Rhodococcus equi ATCC 33707] Length = 264 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR+DL++GFPL+TTKKVH KS+V+ELLWFL Sbjct: 5 YEDLLRLVMDTGTAKADRTGTGTRSVFGHQMRWDLAEGFPLITTKKVHLKSIVYELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L HGV+IWDEWAD DGELGP+YGVQWRSWP G IDQI+ +V++L+ +P Sbjct: 65 RGESNVKWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITKVVETLKTNP 124 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNVA +D MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 125 DSRRIIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 184 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A + G+FI T GD H+Y+NH +Q QLSR P P + +N + + Sbjct: 185 LTHMVAQQADLEVGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLN-KRDSIFDYT 243 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y H AI A V+V Sbjct: 244 FEDVEIVDYRHHPAIKAPVAV 264 >gi|89901757|ref|YP_524228.1| thymidylate synthase [Rhodoferax ferrireducens T118] gi|122996836|sp|Q21U56|TYSY_RHOFD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|89346494|gb|ABD70697.1| thymidylate synthase [Rhodoferax ferrireducens T118] Length = 277 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 160/269 (59%), Positives = 190/269 (70%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D LRHV G + DRTG GT S FGYQMRFDL++GFPL+TTKKV K++V ELLWF Sbjct: 9 QYEDFLRHVSTHGVFKADRTGTGTTSVFGYQMRFDLNEGFPLVTTKKVFLKAIVLELLWF 68 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L G +IWDEWA DG+LGP+YGVQWRSWP DG IDQI+ +++L+ + Sbjct: 69 LRGDSNVKWLQERGCTIWDEWARPDGDLGPVYGVQWRSWPTPDGGHIDQIAEAIKTLKTN 128 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA +DKMAL PCH FQFYV GKLSCQLYQRS D+FLG+P Sbjct: 129 PDSRRIIVSAWNVAELDKMALMPCHAFFQFYVAPAQTPGGKGKLSCQLYQRSADIFLGVP 188 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A G+FI T GD H+Y+NH EQ LQLSR+P P + I Sbjct: 189 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHVYSNHAEQVALQLSRTPFAYPTLSIKRK 248 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + YE H AI A V+V Sbjct: 249 PASIFDYAYEDFEVLGYECHPAIKAPVAV 277 >gi|240850869|ref|YP_002972269.1| thymidylate synthase ThyA [Bartonella grahamii as4aup] gi|240267992|gb|ACS51580.1| thymidylate synthase ThyA [Bartonella grahamii as4aup] Length = 264 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 179/264 (67%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTGVGTRS FGYQMRFDL GFPLLTTKK+H +S+++ELL Sbjct: 1 MKIYLDLLSHVLNNGIDRTDRTGVGTRSIFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+++L HGVSIWDEWAD+ G LGPIYG QWRSWP DG IDQIS ++ ++ Sbjct: 61 WFLRGDTNIAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPAPDGRHIDQISHLLTMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN ALI++MALPPCHC FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ETPDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA QLSR P LP M+IN + DL Sbjct: 181 YALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRIPNALPLMLINSAVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF++EDF L +YE I A V+V Sbjct: 241 SFKFEDFELLNYEAQPHIKAPVAV 264 >gi|110835205|ref|YP_694064.1| thymidylate synthase [Alcanivorax borkumensis SK2] gi|123345289|sp|Q0VM06|TYSY_ALCBS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|110648316|emb|CAL17792.1| thyA [Alcanivorax borkumensis SK2] Length = 277 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 166/277 (59%), Positives = 212/277 (76%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV + G+ + DRTG GT + FGYQMR+DLS+GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLRHVREHGTYKEDRTGTGTYAVFGYQMRYDLSQGFPMLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWD WA +GELGP+YG QWRSW DG VIDQI+ +++ ++ Sbjct: 61 WFLSGDTNIRYLKENGVSIWDGWATPEGELGPVYGEQWRSWKTADGGVIDQITEVLKEIK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN A++ K ALPPCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 RNPDSRRLVVSAWNPAVLPDPSISPDANAAAGKQALPPCHCLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GD+FLG+PFNIASY+LLT+M+A V Q G+F+HTLGD HLY+NH EQAD QL+R+P L Sbjct: 181 GDIFLGVPFNIASYALLTLMMAQVCDLQPGDFVHTLGDAHLYSNHLEQADTQLARTPGPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +F ++DFT+ +Y P A I A V++ Sbjct: 241 PTMTLNPAVKDLFAFTFDDFTVSNYNPDAHIKAPVAI 277 >gi|323356765|ref|YP_004223161.1| thymidylate synthase [Microbacterium testaceum StLB037] gi|323273136|dbj|BAJ73281.1| thymidylate synthase [Microbacterium testaceum StLB037] Length = 269 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 153/261 (58%), Positives = 191/261 (73%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G + DRTG GT S FG Q+RFDL++GFPL+TTK+VH KS+V+ELLWFL Sbjct: 9 YEDLLRDVLETGVHKSDRTGTGTTSVFGRQIRFDLAEGFPLITTKRVHLKSIVYELLWFL 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L +GV+IWDEWAD +GELGP+YGVQWRSWP DG IDQIS +++ +R DP Sbjct: 69 RGESNVGWLKDNGVTIWDEWADGEGELGPVYGVQWRSWPTADGGTIDQISQVIEQIRRDP 128 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWN A I MAL PCH LFQFYV GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 129 DSRRLIVSAWNPADIPDMALAPCHALFQFYVAEGKLSCQLYQRSADMFLGVPFNIASYAL 188 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT+M+A G + G+F+ T GD H+Y+NH EQ QL+R P P + + + Sbjct: 189 LTLMVAQQTGLEPGDFVWTGGDCHVYDNHREQVQEQLTREPYPYPTLRFARTPESIFDYT 248 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y+D + Y+ H AI V+V Sbjct: 249 YDDILVEDYQHHPAIRGAVAV 269 >gi|323137414|ref|ZP_08072492.1| thymidylate synthase [Methylocystis sp. ATCC 49242] gi|322397401|gb|EFX99924.1| thymidylate synthase [Methylocystis sp. ATCC 49242] Length = 268 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 159/268 (59%), Positives = 205/268 (76%), Gaps = 4/268 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL +++ G + DRTG GT S FG+QMRFDL++GFPL+TTK+VH KS++HELL Sbjct: 1 MRQYLDLLDKILREGVRKEDRTGTGTLSIFGHQMRFDLAQGFPLVTTKRVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL +GV+IWDEWAD+ G+LGP+YG QWR+WP G IDQIS +V+ ++ Sbjct: 61 WFLRGDTNIAYLRENGVTIWDEWADESGDLGPVYGRQWRAWPTPGGETIDQISWLVEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN----GKLSCQLYQRSGDVFLGIPF 176 P+SRR IVSAWNVA ID+MAL PCHCLFQF+V +LSCQLYQRS DVFLG+PF Sbjct: 121 KSPFSRRLIVSAWNVAEIDRMALAPCHCLFQFHVAEIDGQKRLSCQLYQRSADVFLGVPF 180 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 N+ASY+LLT M+A V G G+F+H+ GD HLY NH EQA QL+R P+ LP++ +NP+I Sbjct: 181 NVASYALLTQMVAQVTGCVPGDFVHSFGDAHLYLNHLEQARTQLAREPKPLPRLRLNPSI 240 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L F+YED + YE A+ A ++V Sbjct: 241 TSLFDFKYEDIAIEGYESWPALAAPIAV 268 >gi|145346608|ref|XP_001417778.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578006|gb|ABO96071.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 499 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 132/283 (46%), Positives = 186/283 (65%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++R +I G+ + DRTG GT STFG QMRFDL + FPLLTTK+V W+ V ELLW Sbjct: 217 YQYLEMIREIIDQGAVKGDRTGTGTISTFGNQMRFDLRRSFPLLTTKRVFWRGVAEELLW 276 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G++N + L ++IWD ++ G+LGP+YG QWR + Sbjct: 277 FVAGETNANKLAEKKINIWDGNGSREYLDSIGLTEREVGDLGPVYGFQWRHFGAEYTNMH 336 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ +P RR +++AWN A + +MALPPCH QFYV NG+LSC Sbjct: 337 ADYTGKGVDQLAEVIHKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSC 396 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H GD H+Y+NH E + QL+ Sbjct: 397 QMYQRSCDMGLGVPFNIASYSLLTCMIAQVCGLKPGDFVHCCGDTHVYSNHVEPLEKQLA 456 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P + INP D+ SF ++DF + Y+PH I K++V Sbjct: 457 CEPRPFPILKINPEKKDIDSFTFDDFEIVGYDPHPKIEMKMAV 499 >gi|119961084|ref|YP_948699.1| thymidylate synthase [Arthrobacter aurescens TC1] gi|171704616|sp|A1R8Y7|TYSY_ARTAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119947943|gb|ABM06854.1| thymidylate synthase [Arthrobacter aurescens TC1] Length = 267 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 158/261 (60%), Positives = 193/261 (73%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV ELLWFL Sbjct: 7 YEDLLRDVMANGTHKSDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVAVELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV ++ GVSIWDEWAD DGELGP+YGVQWRSWP DG IDQIS ++ +L A+P Sbjct: 67 RGDSNVKWMQDQGVSIWDEWADADGELGPVYGVQWRSWPTPDGGHIDQISELMTNLAANP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHIVSAWNV+ + MALPPCH FQFYV +GKLSCQLYQRS D FLG+PFNIASY+L Sbjct: 127 DSRRHIVSAWNVSELKDMALPPCHAFFQFYVADGKLSCQLYQRSADTFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A +G + GEF+ T GDVH+Y+NH +Q QLSR P PQ+ I + + Sbjct: 187 LTRMVAQQLGLEPGEFVWTGGDVHVYDNHVDQVAEQLSREPYEYPQLKILRKPDSIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +DF + Y H I A ++V Sbjct: 247 LDDFEVVDYRHHPTIKAPIAV 267 >gi|83858879|ref|ZP_00952401.1| thymidylate synthase [Oceanicaulis alexandrii HTCC2633] gi|83853702|gb|EAP91554.1| thymidylate synthase [Oceanicaulis alexandrii HTCC2633] Length = 279 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 156/261 (59%), Positives = 195/261 (74%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDLL +++ G D+ DRTG GTR FG Q+R DLS GFPLLTTKKVH+KS+ ELLWF+ Sbjct: 19 YLDLLHEIMETGEDQTDRTGTGTRGVFGRQIRCDLSDGFPLLTTKKVHFKSIAVELLWFI 78 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G +NV +L GVSIWDEWAD++GELGP+YG QWR W DG IDQ++ +++ +R P Sbjct: 79 KGITNVKWLQERGVSIWDEWADENGELGPVYGKQWRRWEGPDGREIDQLAGLIEQIRQSP 138 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHI+SAWN A + MALPPCH LFQF V G+L QLYQRS D+FLG+PFNIASY+L Sbjct: 139 DSRRHIISAWNPADVPSMALPPCHTLFQFKVLGGRLHLQLYQRSADMFLGVPFNIASYAL 198 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 L M+A G++ GE++HT GD H+Y+NHF+Q QLSR PR LP + +NP I DL +F Sbjct: 199 LLAMVAQATGYEPGEYVHTFGDAHIYSNHFDQVREQLSRDPRPLPTLKLNPEITDLFAFE 258 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED TL Y+PHA I A V+V Sbjct: 259 YEDITLEGYDPHARISAPVAV 279 >gi|300785995|ref|YP_003766286.1| thymidylate synthase [Amycolatopsis mediterranei U32] gi|299795509|gb|ADJ45884.1| thymidylate synthase [Amycolatopsis mediterranei U32] Length = 265 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 156/262 (59%), Positives = 203/262 (77%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLRHV+ G+ + DRTG GTRS FG+Q+R+ LS+GFPL+TTKKVH++S+ +ELLWF Sbjct: 5 QYEDLLRHVLDTGARKGDRTGTGTRSIFGHQLRYRLSEGFPLITTKKVHFRSIAYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD+NVS+L HGV+IWDEWA +DG+LGP+YGVQWRSWP DG +DQI+ ++++LR + Sbjct: 65 LRGDANVSWLREHGVTIWDEWAAEDGDLGPVYGVQWRSWPTPDGGHVDQIAEVLRTLREN 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA I +MALPPCH FQF+V +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRIIVSAWNVADIPRMALPPCHAFFQFHVADGKLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT ++A+ +G G+FI T GD H+Y+NH +Q QL+R R P + + P L + Sbjct: 185 LLTHLIAAQVGLGVGDFIWTGGDCHIYDNHVDQVRTQLAREARPFPTLGLKPA-DSLFEY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YE F++ Y+PH I A V+V Sbjct: 244 TYEHFSVEGYDPHPGIKAPVAV 265 >gi|302532527|ref|ZP_07284869.1| thymidylate synthase [Streptomyces sp. C] gi|302441422|gb|EFL13238.1| thymidylate synthase [Streptomyces sp. C] Length = 265 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 161/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLRHV+ G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH KS+V+ELLWF Sbjct: 5 QYEDLLRHVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLKSIVYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L HGV+IWDEWAD DGELGP+YGVQWRSWP DG +DQI+ ++ +LR D Sbjct: 65 LRGDSNVGWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPDGRHVDQITEVLDTLRRD 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV+ + +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRMIVSAWNVSELSRMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G + G+FI T GD H+Y+NH EQ QLSR+P P++ + L + Sbjct: 185 LLTHMVAQQTGLEPGDFIWTGGDCHIYDNHVEQVTEQLSRTPYEFPRLNL-RQADSLFDY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 Y D + Y H AI A V+V Sbjct: 244 AYSDVEVLDYRHHPAIKAPVAV 265 >gi|260063783|ref|YP_003196863.1| thymidylate synthase [Robiginitalea biformata HTCC2501] gi|88783228|gb|EAR14401.1| thymidylate synthase [Robiginitalea biformata HTCC2501] Length = 274 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 168/277 (60%), Positives = 212/277 (76%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLRHV+K G ++ DRTG GT S FGYQMRFDLS+GFPL+TTKK+H KSV+HELL Sbjct: 1 MKQYHDLLRHVLKEGLEKTDRTGTGTVSVFGYQMRFDLSEGFPLVTTKKIHVKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N++YL +GV IW+EWAD++G+LGP+YG QWR+W + +DQI+ +V+++R Sbjct: 61 WFLRGDTNIAYLKENGVRIWNEWADENGDLGPVYGHQWRNW---NSEGLDQIAQVVETIR 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +V+AWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPDSRRMLVAAWNPSVLPDTSRTFAENVADGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLT+M+A V Q GEFIHT GD H+YNNH EQ LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALLTLMVAQVCNLQPGEFIHTFGDAHIYNNHREQIRLQLSREPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +FRYEDFTL +Y+PH I +V+V Sbjct: 238 PTMELNPEVTDLFAFRYEDFTLHNYDPHPLIRGRVAV 274 >gi|332994533|gb|AEF04588.1| thymidylate synthase [Alteromonas sp. SN2] Length = 277 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 162/277 (58%), Positives = 204/277 (73%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL L+RHV G + DRTG GT S FGYQMRFDL +GFPL+TTKK H KS++HELL Sbjct: 1 MKEYLALMRHVRDTGVKKEDRTGTGTLSVFGYQMRFDLQQGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G+SN++YL +GVSIWD WA ++GELGP+YG QWRSW + DG IDQI+ +++ ++ Sbjct: 61 WFLKGESNIAYLKENGVSIWDGWATEEGELGPVYGKQWRSWDNGDGTTIDQIADVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH +FQFYV +GKLSCQLYQRS Sbjct: 121 TNPDSRRLIVSAWNPSVLPDTQYSPRENASMGKQALPPCHTMFQFYVLDGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GD+FLGIPFNIASY+LLTMM+A V + G+FI TLGD HLY+NH EQ DLQLSR P Sbjct: 181 GDIFLGIPFNIASYALLTMMIAQVCDLEPGDFILTLGDAHLYSNHLEQVDLQLSREPFAP 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +N ++ D+ F +EDFTL+ Y H I A V++ Sbjct: 241 PVMELNKSVKDIFDFSFEDFTLKGYHSHPHIKAPVAI 277 >gi|289163528|ref|YP_003453666.1| Thymidylate synthase [Legionella longbeachae NSW150] gi|288856701|emb|CBJ10512.1| Thymidylate synthase [Legionella longbeachae NSW150] Length = 264 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 157/264 (59%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL H++K G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H +S+VHELL Sbjct: 1 MKTYLNLLEHILKNGTRKTDRTGTGTLSIFGYQMRFDLSQGFPLLTTKKLHTRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N++YL+ +GV+IWDEWAD +G+LGPIYG QWRSWP DG IDQ++ +VQ ++ Sbjct: 61 WFLSGNTNIAYLNENGVTIWDEWADSNGDLGPIYGKQWRSWPTSDGRTIDQLNEVVQEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR +VSAWNV +++MAL PCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 SNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNILSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A Q G+FI T GD HLY NH EQA QL+R P L + I L Sbjct: 181 YSLLTHMVAEQCNLQVGDFIWTGGDCHLYLNHLEQARTQLTREPLPLATLNIKRKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF +Y+ H AI A ++V Sbjct: 241 EYTFDDFEFLNYQSHPAIKAPIAV 264 >gi|256824789|ref|YP_003148749.1| thymidylate synthase [Kytococcus sedentarius DSM 20547] gi|256688182|gb|ACV05984.1| thymidylate synthase [Kytococcus sedentarius DSM 20547] Length = 264 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L V++ G+ DRTG GT S FG Q R+DL+ GFPL+TTKKV+ + VV ELL Sbjct: 1 MRQYLDWLTDVLENGTPTEDRTGTGTLSVFGRQTRYDLAAGFPLVTTKKVYRRGVVGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L + IWDEWAD++G+LGP+YG QWRSWP DG +DQI+ +V+SLR Sbjct: 61 WFLRGDTNVRWLQERKIHIWDEWADENGDLGPVYGAQWRSWPRPDGGTVDQIAKVVESLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A P SRRHIVSAWN A +D MALPPCH LFQF+V G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 AHPASRRHIVSAWNPAEVDDMALPPCHALFQFHVSGGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + GEF+HT+GD+HLY+NH EQA QL+R PR LP++ +NP + +L Sbjct: 181 YALLTHMVAHVTDLEVGEFVHTVGDLHLYSNHLEQAREQLAREPRPLPRLELNPAVRELD 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D T Y+PH AI A ++V Sbjct: 241 AFDLDDVTFHGYDPHPAISAPIAV 264 >gi|221066060|ref|ZP_03542165.1| Thymidylate synthase [Comamonas testosteroni KF-1] gi|220711083|gb|EED66451.1| Thymidylate synthase [Comamonas testosteroni KF-1] Length = 276 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF Sbjct: 14 QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 LRGDSNV +L G +IWDEWADK G+LGP+YGVQWRSWP DG +DQI+ +V+ L++ Sbjct: 74 LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLQS 133 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR IVSAWNVA +D+MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY Sbjct: 134 NPDSRRIIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 193 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA G + G+FI T GD H+YNNHFEQ QLSR P P + I + Sbjct: 194 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPDSIFG 253 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + YEDF + Y+ HA I A V+V Sbjct: 254 YEYEDFEVLDYQHHAGIKAPVAV 276 >gi|319953673|ref|YP_004164940.1| thymidylate synthase [Cellulophaga algicola DSM 14237] gi|319422333|gb|ADV49442.1| thymidylate synthase [Cellulophaga algicola DSM 14237] Length = 274 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 155/277 (55%), Positives = 209/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+HV++ G+ + DRTG GT+S FGYQMRFDLSKGFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLLQHVLETGNQKGDRTGTGTKSVFGYQMRFDLSKGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW++WAD++G+LGP+YG QWR+W + IDQI V++L+ Sbjct: 61 WFLKGDTNIDYLKENGVRIWNDWADENGDLGPVYGHQWRNW---NSEEIDQIKDAVETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR ++SAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMLISAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A G++ G+FIHT GD H+YNNH +Q +LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQACGYEAGDFIHTFGDAHIYNNHMDQVELQLSRDPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M++NP + ++ F++EDFTL Y PH I V++ Sbjct: 238 PKMVLNPEVKNIFDFKFEDFTLVDYNPHPHIKGVVAI 274 >gi|172057750|ref|YP_001814210.1| thymidylate synthase [Exiguobacterium sibiricum 255-15] gi|171990271|gb|ACB61193.1| Thymidylate synthase [Exiguobacterium sibiricum 255-15] Length = 264 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 141/264 (53%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L + ++ G + DRTG GT S FG+QMRF L GFP++TTKK+H KS++HEL+ Sbjct: 1 MKQYHQLCQEILTNGVKKEDRTGTGTISIFGHQMRFSLQDGFPMVTTKKLHMKSIIHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ G++N+SYL +GV IW+EWAD++G LGP+YG QWRS+P DG +DQ++ +++ ++ Sbjct: 61 WFISGETNISYLQENGVRIWNEWADENGNLGPVYGAQWRSFPKPDGTTVDQLADVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN +++MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 VNPDSRRLIVSAWNPGQLEEMALPPCHLLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V + G+F+HTLGD H+Y+NH +Q +LQLSR+P+ LP + + + Sbjct: 181 YALLTHMIAHVCKLEVGDFVHTLGDSHIYSNHLDQVNLQLSRNPKPLPTIRFAREVERIE 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++D + Y+P I V+V Sbjct: 241 DFTFDDIIIEGYDPDPHIKGVVAV 264 >gi|270158215|ref|ZP_06186872.1| thymidylate synthase [Legionella longbeachae D-4968] gi|269990240|gb|EEZ96494.1| thymidylate synthase [Legionella longbeachae D-4968] Length = 269 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 157/264 (59%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL H++K G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H +S+VHELL Sbjct: 6 MKTYLNLLEHILKNGTRKTDRTGTGTLSIFGYQMRFDLSQGFPLLTTKKLHTRSIVHELL 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G++N++YL+ +GV+IWDEWAD +G+LGPIYG QWRSWP DG IDQ++ +VQ ++ Sbjct: 66 WFLSGNTNIAYLNENGVTIWDEWADSNGDLGPIYGKQWRSWPTSDGRTIDQLNEVVQEIK 125 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR +VSAWNV +++MAL PCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 126 SNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNILSCQLYQRSADVFLGVPFNIAS 185 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A Q G+FI T GD HLY NH EQA QL+R P L + I L Sbjct: 186 YSLLTHMVAEQCNLQVGDFIWTGGDCHLYLNHLEQARTQLTREPLPLATLNIKRKPQSLF 245 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + ++DF +Y+ H AI A ++V Sbjct: 246 EYTFDDFEFLNYQSHPAIKAPIAV 269 >gi|217976787|ref|YP_002360934.1| Thymidylate synthase [Methylocella silvestris BL2] gi|254790244|sp|B8ELI3|TYSY_METSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|217502163|gb|ACK49572.1| Thymidylate synthase [Methylocella silvestris BL2] Length = 269 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 159/269 (59%), Positives = 198/269 (73%), Gaps = 5/269 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+ +++ G + DRTG GT S FGYQMRFDL GFPL+TTKK+HWKS+VHEL+ Sbjct: 1 MQAYLDLIDKILREGVRKPDRTGTGTLSIFGYQMRFDLGAGFPLVTTKKLHWKSIVHELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL +GV IWDEWAD G+LGP+YG QWRSW DG IDQI++++ ++ Sbjct: 61 WFLRGDTNIGYLKDNGVGIWDEWADDSGDLGPVYGRQWRSWQAPDGRTIDQIANVIDEIQ 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVFLGIP 175 DP+SRR +VSAWN A + MAL PCHCLFQF V + +L QLYQRSGD FLG P Sbjct: 121 RDPFSRRLLVSAWNPADLPAMALAPCHCLFQFNVRDDSTGTRRLDLQLYQRSGDAFLGAP 180 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT ++ASV G G+F+HT GD HLY NH +QA LQLSR PR LP++ IN N Sbjct: 181 FNIASYALLTELVASVCGLTPGDFVHTFGDAHLYLNHIDQAKLQLSRDPRPLPRLRINGN 240 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + L R+ED +L +Y+PH I A V+V Sbjct: 241 VKSLFDIRFEDLSLENYDPHPVIKAPVAV 269 >gi|213962407|ref|ZP_03390670.1| thymidylate synthase [Capnocytophaga sputigena Capno] gi|213955073|gb|EEB66392.1| thymidylate synthase [Capnocytophaga sputigena Capno] Length = 274 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 171/277 (61%), Positives = 210/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLRH+++ G + DRTG GT S FGYQMRFDLSKGFPL+TTKK+H KSV++ELL Sbjct: 1 MKVYHDLLRHILENGYSKDDRTGTGTTSVFGYQMRFDLSKGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGV IW+EWAD++G+LGP+YG QWR+W +G IDQI ++++L+ Sbjct: 61 WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRNW---NGEAIDQIKMVIETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 118 HNPESRRIIVSAWNPSVLPDTGKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLTMMLA V Q G+F+HT GDVH+YNNH EQ LQLSR PR L Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQVGDFVHTFGDVHIYNNHREQVALQLSRIPREL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +F YEDF L Y+P+ AI A+VSV Sbjct: 238 PTMHLNPAVKDLFAFDYEDFRLEGYDPYPAIKAQVSV 274 >gi|114331021|ref|YP_747243.1| thymidylate synthase [Nitrosomonas eutropha C91] gi|122314079|sp|Q0AHA4|TYSY_NITEC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|114308035|gb|ABI59278.1| thymidylate synthase [Nitrosomonas eutropha C91] Length = 264 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 171/264 (64%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MH YLDL+RHV+++G + DRTG GT S FGYQMRFDL +GFPL+TTK+ H KS++HELL Sbjct: 1 MHPYLDLMRHVLQYGHKKTDRTGTGTLSIFGYQMRFDLQQGFPLVTTKQCHVKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL ++G+SIW+EWADK GELGP+YG QWRSW IDQI+ ++Q ++ Sbjct: 61 WFLRGDTNIDYLKKNGISIWNEWADKSGELGPVYGHQWRSWTVSGDKSIDQIAQVIQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A P SRR I+SAWNV +DKMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ATPDSRRMIISAWNVGDLDKMALAPCHVLFQFYVVDGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT+M+A + GEFIHT GD HLY NH EQA LQL+R P++LP M +NP I ++L Sbjct: 181 YSLLTLMIAQCCNLKPGEFIHTFGDAHLYLNHLEQARLQLTREPKSLPIMELNPAIRNIL 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDFTL +Y+PH I A V+V Sbjct: 241 DFRYEDFTLHNYDPHPPIKAPVAV 264 >gi|303257367|ref|ZP_07343381.1| thymidylate synthase [Burkholderiales bacterium 1_1_47] gi|302860858|gb|EFL83935.1| thymidylate synthase [Burkholderiales bacterium 1_1_47] Length = 267 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 160/262 (61%), Positives = 196/262 (74%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +R V + G ++ DRTGVGTRS FGYQMRF+L +GFPL+TTKK+H +S++HELLWF Sbjct: 6 QYETFMRDVFEHGVEKSDRTGVGTRSMFGYQMRFNLQEGFPLVTTKKLHLRSIIHELLWF 65 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L GDSNV YLH + V+IWDEWAD +G+LGPIYGVQWR W DG IDQIS+++ ++ + Sbjct: 66 LHGDSNVKYLHDNKVTIWDEWADANGDLGPIYGVQWRHWKTSDGGYIDQISNLIHQIKTN 125 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNV IDKMALPPCH FQFYV GKLSCQLYQRS D+FLG+PFNIASYS Sbjct: 126 PDSRRLVVSAWNVGEIDKMALPPCHMFFQFYVAQGKLSCQLYQRSCDIFLGVPFNIASYS 185 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G+FI T GD H+YNNHFEQ LQLSR PR P++II + + Sbjct: 186 LLTHMIAQQCDLDVGDFIWTGGDCHIYNNHFEQVKLQLSREPRPYPKLIIKRRPDSIFDY 245 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 +EDF + Y+P AI A ++V Sbjct: 246 NFEDFEIVDYDPWPAIKAPIAV 267 >gi|298209224|ref|YP_003717403.1| thymidylate synthase [Croceibacter atlanticus HTCC2559] gi|83849151|gb|EAP87020.1| thymidylate synthase [Croceibacter atlanticus HTCC2559] Length = 274 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 159/277 (57%), Positives = 208/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+RHV+K G + DRTG GT+S FGYQMRF+LS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLMRHVLKAGVQKGDRTGTGTKSVFGYQMRFNLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IW+EWAD++G+LGP+YG QWR+W + IDQI I+ +L+ Sbjct: 61 WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGHQWRNW---NSEEIDQIKDIIDTLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV GKLSCQLYQRS Sbjct: 118 NNPNSRRMLVSAWNPSVMPNTSESFSENVAKGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+YNNHFEQ +LQLSR R L Sbjct: 178 ADIFLGVPFNIASYALLTMMIAQVCGYEAGDFIHTFGDAHIYNNHFEQVELQLSRECRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M IN ++ D+ F+++DFTL +Y PH I V++ Sbjct: 238 PKMQINKDVKDIFGFKFDDFTLINYNPHPHIKGAVAI 274 >gi|119716538|ref|YP_923503.1| thymidylate synthase [Nocardioides sp. JS614] gi|166231720|sp|A1SJ31|TYSY_NOCSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119537199|gb|ABL81816.1| thymidylate synthase [Nocardioides sp. JS614] Length = 273 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 158/273 (57%), Positives = 201/273 (73%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+ V+ G + DRTG GT S FG+QMRFDL GFPL+TTKKVH +SV ELL Sbjct: 1 MRAYLDLLQRVVDEGVPKGDRTGTGTLSVFGHQMRFDLRAGFPLVTTKKVHTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L G++IWDEWAD+ G+LGP+YG QWRSWP DG +DQI+ +V+ +R Sbjct: 61 WFLRGDTNVKWLQDRGITIWDEWADEQGDLGPVYGYQWRSWPTPDGRHVDQIAQVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLYQRSGDVF 171 P SRRH+VSAWNVA I MAL PCH +FQFYV G+LSCQLYQRS DVF Sbjct: 121 DSPDSRRHVVSAWNVADIPDMALAPCHTMFQFYVAPPGPGEESGPGRLSCQLYQRSADVF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLT M+A V G + G+F+HTLGD HLY+NH +QA LQL+R PR LP+++ Sbjct: 181 LGVPFNIASYALLTHMVAQVTGLEVGDFVHTLGDAHLYSNHLDQARLQLTREPRPLPRLV 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ ++ +L +F E + Y+PH I A ++V Sbjct: 241 LDSSVTELDAFDLEHIAVEGYDPHPGIKAPIAV 273 >gi|327538952|gb|EGF25590.1| thymidylate synthase [Rhodopirellula baltica WH47] Length = 301 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL V+ G DR DRTGVGTRS FG QMRFDL++GFPLLTTKK+H +S++HELL Sbjct: 38 MQGYLQLLDEVLHDGIDRDDRTGVGTRSLFGRQMRFDLAEGFPLLTTKKLHIRSILHELL 97 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL + VSIWDEWAD+ G+LGP+YG QWRSW +G+ +DQI+ + +R Sbjct: 98 WFLRGDTNIGYLKENKVSIWDEWADEAGDLGPVYGHQWRSWEGANGDTVDQIAWVENEIR 157 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + KMALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 158 TNPRSRRLVVSAWNVADVPKMALPPCHLLFQFYVSGGRLSCQLYQRSADLFLGVPFNIAS 217 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y++LT M+A V G + GEF+HTLGDVHLY+NHF+QA QLSR+PR LP I ++ + Sbjct: 218 YAMLTSMMAHVTGLKPGEFVHTLGDVHLYSNHFDQAREQLSRTPRPLPTFHIKRDVASVT 277 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++DF L +Y+PH I A V+V Sbjct: 278 DFQFDDFELTNYDPHPHIKAPVAV 301 >gi|254495239|ref|ZP_05108163.1| Thymidylate synthase [Polaribacter sp. MED152] gi|85819592|gb|EAQ40749.1| Thymidylate synthase [Polaribacter sp. MED152] Length = 274 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 155/277 (55%), Positives = 209/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+V+ELL Sbjct: 1 MKQYHDLVKHVLENGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+NV YL +GV IW+EWAD++G+LGP+YG QWR+W + +DQ+ ++ +L+ Sbjct: 61 WFIKGDTNVKYLQENGVRIWNEWADENGDLGPVYGHQWRNWNSDE---VDQLKEVIATLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 ++P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 SNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVSDGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+YNNH EQ +LQLSR R L Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYNNHVEQLELQLSRDIRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +N I ++ F ++DF L+ Y PH I KV+V Sbjct: 238 PKMKLNTAITNIEDFTFDDFELQDYNPHPHIKGKVAV 274 >gi|120610137|ref|YP_969815.1| thymidylate synthase [Acidovorax citrulli AAC00-1] gi|171769177|sp|A1TM53|TYSY_ACIAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120588601|gb|ABM32041.1| thymidylate synthase [Acidovorax citrulli AAC00-1] Length = 279 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 163/269 (60%), Positives = 195/269 (72%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GTRS FGYQMRFDL++GFPL+TTKKVH KS++ ELLWF Sbjct: 11 QYEDFMRHVYTHGVAKGDRTGTGTRSVFGYQMRFDLNEGFPLVTTKKVHLKSIITELLWF 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G S+ +L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS +V++LR Sbjct: 71 LTGSSSNHWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISQVVETLRTH 130 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA +DKMAL PCH FQFYV GKLSCQLYQRS D+FLG+P Sbjct: 131 PDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPPQAAGERGKLSCQLYQRSADIFLGVP 190 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A + G+FI T GD H+Y+NHFEQ +LQLSR+P P + I Sbjct: 191 FNIASYALLTHMMAQQCNLEVGDFIWTGGDCHIYSNHFEQVELQLSRAPHPYPTLHILRR 250 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +R+EDF +R Y H AI A V+V Sbjct: 251 PDSLFDYRFEDFEVRDYAHHPAIKAPVAV 279 >gi|32477613|ref|NP_870607.1| thymidylate synthase [Rhodopirellula baltica SH 1] gi|62901353|sp|Q7UID0|TYSY_RHOBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|32448167|emb|CAD77684.1| thymidylate synthase [Rhodopirellula baltica SH 1] Length = 264 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 206/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL V+ G DR DRTGVGTRS FG QMRFDL++GFPLLTTKK+H +S++HELL Sbjct: 1 MQGYLQLLDEVLHDGIDRDDRTGVGTRSLFGRQMRFDLAEGFPLLTTKKLHIRSILHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL + VSIWDEWAD+ G+LGP+YG QWRSW +G+ +DQI+ + +R Sbjct: 61 WFLRGDTNIGYLKENKVSIWDEWADEAGDLGPVYGHQWRSWEGANGDTVDQIAWVENEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNVA + KMALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TNPRSRRLVVSAWNVADVPKMALPPCHLLFQFYVSGGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y++LT M+A V G + GEF+HTLGDVHLY+NHF+QA QLSR+PR LP I ++ + Sbjct: 181 YAMLTSMMAHVTGLKPGEFVHTLGDVHLYSNHFDQAREQLSRTPRPLPTFHIKRDVASVT 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+++DF L +Y+PH I A V+V Sbjct: 241 DFQFDDFELTNYDPHPHIKAPVAV 264 >gi|239918228|ref|YP_002957786.1| thymidylate synthase [Micrococcus luteus NCTC 2665] gi|289705051|ref|ZP_06501462.1| thymidylate synthase [Micrococcus luteus SK58] gi|239839435|gb|ACS31232.1| thymidylate synthase [Micrococcus luteus NCTC 2665] gi|289558214|gb|EFD51494.1| thymidylate synthase [Micrococcus luteus SK58] Length = 276 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 156/267 (58%), Positives = 193/267 (72%), Gaps = 6/267 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL V+ G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV ELLWFL Sbjct: 10 YEDLLADVMAHGAVKTDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVALELLWFL 69 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV IW+EWAD+DGELGP+YGVQWRSWP DG IDQI+ +V+ +R +P Sbjct: 70 RGDSNVRWLQERGVRIWNEWADEDGELGPVYGVQWRSWPTPDGGHIDQIAKVVEQIRTNP 129 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFN 177 SRRHIV+AWN A +D+MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFN Sbjct: 130 DSRRHIVTAWNPAEVDEMALPPCHALFQFYVSPGQDGAPGRLSCQLYQRSADLFLGVPFN 189 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 IASY+LLT+M+A G GEF+ T GDVH+Y NH EQ QLSR P P++ + Sbjct: 190 IASYALLTVMVAQQTGLTPGEFVWTGGDVHIYANHEEQVREQLSREPYPYPRLRLRRTPA 249 Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + Y H I A ++V Sbjct: 250 SIFDYDYEDFEVLDYRHHPTITAPIAV 276 >gi|330999206|ref|ZP_08322924.1| thymidylate synthase [Parasutterella excrementihominis YIT 11859] gi|329575272|gb|EGG56820.1| thymidylate synthase [Parasutterella excrementihominis YIT 11859] Length = 267 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 159/262 (60%), Positives = 196/262 (74%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY +R V + G ++ DRTGVGTRS FGYQMRF+L +GFPL+TTKK+H +S++HELLWF Sbjct: 6 QYETFMRDVFEHGVEKSDRTGVGTRSMFGYQMRFNLQEGFPLVTTKKLHLRSIIHELLWF 65 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L GDSN+ YLH + V+IWDEWAD +G+LGPIYGVQWR W DG IDQIS+++ ++ + Sbjct: 66 LHGDSNIKYLHDNKVTIWDEWADANGDLGPIYGVQWRHWKTSDGGYIDQISNLIHQIKTN 125 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNV IDKMALPPCH FQFYV GKLSCQLYQRS D+FLG+PFNIASYS Sbjct: 126 PDSRRLVVSAWNVGEIDKMALPPCHMFFQFYVAQGKLSCQLYQRSCDIFLGVPFNIASYS 185 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G+FI T GD H+YNNHFEQ LQLSR PR P++II + + Sbjct: 186 LLTHMIAQQCDLDVGDFIWTGGDCHIYNNHFEQVKLQLSREPRPYPKLIIKRRPDSIFDY 245 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 +EDF + Y+P AI A ++V Sbjct: 246 NFEDFEIVDYDPWPAIKAPIAV 267 >gi|309812530|ref|ZP_07706278.1| thymidylate synthase [Dermacoccus sp. Ellin185] gi|308433508|gb|EFP57392.1| thymidylate synthase [Dermacoccus sp. Ellin185] Length = 264 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 168/264 (63%), Positives = 210/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY LLR ++ G+ + DRTG GT S FG+QMRFDLS+GFP+LTTKK+H +S+ ELL Sbjct: 1 MEQYHALLRRILDEGTRKDDRTGTGTLSVFGHQMRFDLSQGFPVLTTKKLHLRSIFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV++LH +SIWDEWAD DG+LGPIYG QWRSWP +G IDQI+ +V+S+R Sbjct: 61 WFLRGDTNVAWLHERKISIWDEWADPDGDLGPIYGHQWRSWPTPNGETIDQIARVVESVR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA +D MALPPCH +FQFYV +GKLSCQLYQRSGDVFLG+PFNIAS Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHTMFQFYVADGKLSCQLYQRSGDVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A V G G+F+HTLGD HLY NH +QA LQL+R+P+TLP +++NP++ L Sbjct: 181 YALLTHMVAQVTGLAVGDFVHTLGDAHLYVNHLDQARLQLTRTPKTLPTLVLNPDVTALD 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F +D L YE AI A+V+V Sbjct: 241 AFELDDIRLDGYEADPAIKAQVAV 264 >gi|254419110|ref|ZP_05032834.1| thymidylate synthase [Brevundimonas sp. BAL3] gi|196185287|gb|EDX80263.1| thymidylate synthase [Brevundimonas sp. BAL3] Length = 307 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 166/263 (63%), Positives = 199/263 (75%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+LLR ++ G R DRTG GT FG QMRFDLSKGFP+LTTKK+H +S++ ELLW Sbjct: 46 RQYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPVLTTKKLHLRSIIVELLW 105 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRG++N+ +L +GV IWDEWAD +GELGP+YG QWRSW DG IDQI +V L+ Sbjct: 106 FLRGETNIGWLKDNGVRIWDEWADAEGELGPVYGKQWRSWTAPDGRSIDQIEKLVHGLKT 165 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRRHIV+AWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 166 NPNSRRHIVTAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASY 225 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT+MLA V+G + G+F+HT GD HLY NH EQA+LQL+R P LP M I P DL + Sbjct: 226 ALLTLMLAQVVGLEPGDFVHTFGDAHLYLNHLEQAELQLTREPLPLPVMHIAPK-TDLFA 284 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 F DFTL YE I A V+V Sbjct: 285 FELSDFTLEGYEAWPHIKAAVAV 307 >gi|281415580|ref|ZP_06247322.1| thymidylate synthase [Micrococcus luteus NCTC 2665] Length = 273 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 156/267 (58%), Positives = 193/267 (72%), Gaps = 6/267 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL V+ G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV ELLWFL Sbjct: 7 YEDLLADVMAHGAVKTDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVALELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV IW+EWAD+DGELGP+YGVQWRSWP DG IDQI+ +V+ +R +P Sbjct: 67 RGDSNVRWLQERGVRIWNEWADEDGELGPVYGVQWRSWPTPDGGHIDQIAKVVEQIRTNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFN 177 SRRHIV+AWN A +D+MALPPCH LFQFYV G+LSCQLYQRS D+FLG+PFN Sbjct: 127 DSRRHIVTAWNPAEVDEMALPPCHALFQFYVSPGQDGAPGRLSCQLYQRSADLFLGVPFN 186 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 IASY+LLT+M+A G GEF+ T GDVH+Y NH EQ QLSR P P++ + Sbjct: 187 IASYALLTVMVAQQTGLTPGEFVWTGGDVHIYANHEEQVREQLSREPYPYPRLRLRRTPA 246 Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + Y H I A ++V Sbjct: 247 SIFDYDYEDFEVLDYRHHPTITAPIAV 273 >gi|223937832|ref|ZP_03629732.1| Thymidylate synthase [bacterium Ellin514] gi|223893438|gb|EEF59899.1| Thymidylate synthase [bacterium Ellin514] Length = 264 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY LL+ V++ G + DRTG GT + FG Q RF L+ GFP++TTKK+H KS+++ELL Sbjct: 1 MIQYHQLLKLVLEQGKFKPDRTGTGTYAVFGAQARFPLADGFPVVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YL+ +GV+IWDEWAD +G LG +YG QW W DG I+QI ++ ++ Sbjct: 61 WFLRGDTNVKYLNENGVTIWDEWADTEGNLGRVYGAQWCDWRTADGRSINQIDEVIAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRRHIVSAWNV I++MALPPCH LFQF+V +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KTPDSRRHIVSAWNVGEIERMALPPCHALFQFFVQDGELSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V + G F+HT GD+HLY+NH EQA LQLSR P+ LPQM +NP I ++ Sbjct: 181 YALLTMMVAQVCDLKPGTFVHTFGDLHLYSNHLEQAKLQLSREPKQLPQMKLNPAIKNIH 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF L Y+PH I A ++V Sbjct: 241 EFKFEDFQLAGYDPHPGIKAPIAV 264 >gi|209363794|ref|YP_001423860.2| thymidylate synthase [Coxiella burnetii Dugway 5J108-111] gi|207081727|gb|ABS77420.2| thymidylate synthase [Coxiella burnetii Dugway 5J108-111] Length = 296 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 149/264 (56%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+ ++ G + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL Sbjct: 33 MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 92 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W DG +DQ+ +++ ++ Sbjct: 93 WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 152 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS Sbjct: 153 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 212 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A + GEFI + GD H+YN H +Q QLSR PR LPQ+IIN + L Sbjct: 213 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 272 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + + DF++ +Y PH AI A V+V Sbjct: 273 DYNFNDFSIVNYHPHPAIKAPVAV 296 >gi|296118294|ref|ZP_06836875.1| thymidylate synthase [Corynebacterium ammoniagenes DSM 20306] gi|295968852|gb|EFG82096.1| thymidylate synthase [Corynebacterium ammoniagenes DSM 20306] Length = 270 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 150/261 (57%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL+ V++ G+++ DRTG GTRS FG+Q+R+DL++ FPLLTTKKV++ V+ ELLWFL Sbjct: 11 YEELLKKVLETGAEKSDRTGTGTRSLFGHQLRYDLNESFPLLTTKKVYFHGVIGELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNVS+L + + IW+EWAD +GELGP+YGVQWRSWP DG IDQI +++ L+ +P Sbjct: 71 RGESNVSWLQENKIRIWNEWADANGELGPVYGVQWRSWPTPDGQHIDQIETVMDQLKNNP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ +DKMAL PCH LFQ YV GKLS Q+YQRS D+FLG+PFNIASY+ Sbjct: 131 DSRRILVSAWNVSELDKMALMPCHLLFQLYVAEGKLSMQVYQRSADMFLGVPFNIASYAA 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GE I T GDVH+YNNH EQ QL+R+PR PQ+ +N + + Sbjct: 191 LTHMFAQQAGLEVGELIWTGGDVHIYNNHIEQVKEQLARTPRAYPQLKLN-KAKSIFDYN 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++DF L Y+PH I A VSV Sbjct: 250 FDDFELEGYDPHPTIKAPVSV 270 >gi|38233422|ref|NP_939189.1| thymidylate synthase [Corynebacterium diphtheriae NCTC 13129] gi|62901324|sp|Q6NIF2|TYSY_CORDI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|38199682|emb|CAE49341.1| thymidylate synthase [Corynebacterium diphtheriae] Length = 270 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 154/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ GS + DRTG GT S FG QMRFDL++ FPL+TTKKV+WK V+ ELLWFL Sbjct: 11 YEDLLRTILEQGSHKDDRTGTGTTSLFGQQMRFDLTEAFPLITTKKVYWKGVIGELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G SNV +L + + IWDEWA ++GELGP+YGVQWRSWP DG +DQI+ + L+ +P Sbjct: 71 QGSSNVRWLQKRNIHIWDEWASEEGELGPVYGVQWRSWPTPDGQHVDQIAQALDILKNNP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNVA ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYS Sbjct: 131 DSRRNIVSAWNVADLNNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSA 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA G + GEFI T GD H+Y+NH EQ QLSR PR PQ+ + + + Sbjct: 191 LTHMLAQQAGLKVGEFIWTGGDCHIYDNHREQVLTQLSREPRPYPQLTL-RKASSIFDYD 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++DFT+ Y+PH AI +V+V Sbjct: 250 FDDFTIEGYDPHPAIRGEVAV 270 >gi|310287943|ref|YP_003939202.1| Thymidylate synthase [Bifidobacterium bifidum S17] gi|309251880|gb|ADO53628.1| Thymidylate synthase [Bifidobacterium bifidum S17] Length = 311 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 149/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL Sbjct: 48 YEDLVRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFL 107 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119 +G SNV +L H V IWD+WAD++G+LGP+YGVQWRSWP IDQI +++ + Sbjct: 108 KGSSNVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIGNVLDLI 167 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIA Sbjct: 168 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIA 227 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QLSR P P++ I L Sbjct: 228 SYSLLTMMIAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEI-RKADSL 286 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDFT+ Y H I A V+V Sbjct: 287 FDYQYEDFTIVDYRHHPTIKAPVAV 311 >gi|308178169|ref|YP_003917575.1| thymidylate synthase [Arthrobacter arilaitensis Re117] gi|307745632|emb|CBT76604.1| thymidylate synthase [Arthrobacter arilaitensis Re117] Length = 267 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 159/261 (60%), Positives = 189/261 (72%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y LLR V++ G+ + DRTG GT S FG Q+RFDL FPL+TTK+VH+KSV ELLWFL Sbjct: 7 YETLLRDVLENGTAKEDRTGTGTLSVFGRQIRFDLQDSFPLITTKRVHFKSVAAELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L GV IW+EWAD+DGELGP+YGVQWRSWP +G IDQIS +V SLR +P Sbjct: 67 RGESNVKWLQDQGVRIWNEWADEDGELGPVYGVQWRSWPTPEGGYIDQISQLVDSLRNNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHIVSAWNVA I MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRHIVSAWNVAEIQNMALPPCHVFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA + + GEFI T GDVH+Y NH EQ QLSR P P + N + + Sbjct: 187 LTAMLAHQLDLEPGEFIWTGGDVHIYTNHVEQVKEQLSRDPYPYPTLSFNSKPDSIFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 EDF++ Y+ H I V+V Sbjct: 247 LEDFSINDYQHHPTIKGTVAV 267 >gi|315225492|ref|ZP_07867305.1| thymidylate synthase [Capnocytophaga ochracea F0287] gi|314944590|gb|EFS96626.1| thymidylate synthase [Capnocytophaga ochracea F0287] Length = 274 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 169/277 (61%), Positives = 208/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLRH++ G + DRTG GT S FGYQMRFDL+KGFPL+TTKK+H KSV++ELL Sbjct: 1 MQTYHDLLRHILDNGYSKDDRTGTGTTSVFGYQMRFDLNKGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGV IW+EWAD++G+LGP+YG QWR W +G IDQI ++V++L+ Sbjct: 61 WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRHW---NGEAIDQIKTVVETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 118 QNPESRRIIVSAWNPSVLPDTGKSFTENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLTMMLA V Q G+F+HT GDVH+YNNH EQ LQLSR+PR L Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +N + DL +F YEDF L Y+P+ I A+VSV Sbjct: 238 PTMHLNRAVKDLFAFDYEDFRLEGYDPYPTIKAQVSV 274 >gi|332531037|ref|ZP_08406956.1| thymidylate synthase [Hylemonella gracilis ATCC 19624] gi|332039518|gb|EGI75925.1| thymidylate synthase [Hylemonella gracilis ATCC 19624] Length = 283 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 158/269 (58%), Positives = 195/269 (72%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT S FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF Sbjct: 15 QYEDFMRHVHTHGVAKSDRTGTGTTSVFGHQMRFDLNEGFPLVTTKKVHLKSIILELLWF 74 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G SN ++L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS ++++L+++ Sbjct: 75 LTGSSNNNWLKDRGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKSN 134 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + KMAL PCH FQFYV GKLSCQLYQRS D+FLG+P Sbjct: 135 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGVP 194 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A G G+FI T GD H+Y+NH EQ +LQLSR P P + I Sbjct: 195 FNIASYALLTHMVAQQCGLGVGDFIWTGGDCHIYSNHHEQVELQLSRQPYPYPVLHIKRQ 254 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++YEDF +R Y+ H AI A V+V Sbjct: 255 PDSIFDYQYEDFEVRDYQCHPAIKAPVAV 283 >gi|302556750|ref|ZP_07309092.1| thymidylate synthase [Streptomyces griseoflavus Tu4000] gi|302474368|gb|EFL37461.1| thymidylate synthase [Streptomyces griseoflavus Tu4000] Length = 265 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 156/262 (59%), Positives = 193/262 (73%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL+ V+ G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH KS+V+ELLWF Sbjct: 5 QYEDLLQLVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLKSIVYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L HGV+IWDEWAD +G+LGP+YG QWRSWP DG IDQI ++ +LR D Sbjct: 65 LRGDSNVRWLQEHGVTIWDEWADDNGDLGPVYGAQWRSWPTPDGRHIDQIEEVLGTLRRD 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV+ + KMAL PCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRMIVSAWNVSELSKMALAPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G + G+FI T GD H+Y+NH Q QLSR+P P + + L + Sbjct: 185 LLTHMVAQQSGLEPGDFIWTGGDCHIYDNHVAQVTEQLSRTPFAFPALEL-RRADSLFDY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 Y D + Y H AI A V+V Sbjct: 244 SYSDVQVAGYRHHPAIKAPVAV 265 >gi|325981748|ref|YP_004294150.1| thymidylate synthase [Nitrosomonas sp. AL212] gi|325531267|gb|ADZ25988.1| thymidylate synthase [Nitrosomonas sp. AL212] Length = 264 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 201/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++HVI G + DRTG+GT S FG+QMRFDL+ GFPL+TTKK H KS++HELL Sbjct: 1 MRQYLELMQHVIDHGFQKTDRTGIGTLSIFGHQMRFDLNDGFPLVTTKKCHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RGD+NV YLH++GVSIWDEWAD +G LGPIYG QWRSW DG IDQ+ +++ + Sbjct: 61 WFIRGDTNVRYLHKYGVSIWDEWADVNGNLGPIYGQQWRSWMSADGQKIDQLQQVIKQII 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VS+WNV + +M LPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 DTPDSRRMLVSSWNVGELHRMRLPPCHALFQFYVADNKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V GEF+HTLGD HLY NH EQA QLSR PR LP M +NP I + Sbjct: 181 YALLTMMIAQVSNLGVGEFVHTLGDAHLYLNHLEQAREQLSRQPRPLPVMRLNPMIRTIS 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F YEDF L +Y+PH I A V+V Sbjct: 241 EFEYEDFVLENYDPHPPIKAPVAV 264 >gi|330720247|gb|EGG98613.1| Thymidylate synthase [gamma proteobacterium IMCC2047] Length = 277 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 151/266 (56%), Positives = 192/266 (72%), Gaps = 2/266 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V+ G D+ DRTGVGTRS FG Q+RFDL GFPL+TTK H KS++HELL Sbjct: 12 MQQYLDLMQDVLDNGVDKSDRTGVGTRSVFGRQLRFDLGAGFPLVTTKNCHLKSIIHELL 71 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV+IWDEWAD+ G LGP+YG QWR+W DG +DQIS +V +L+ Sbjct: 72 WFLQGDTNIRYLKENGVTIWDEWADEKGNLGPVYGEQWRAWRKPDGGTVDQISKLVHNLK 131 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V A+N + D+MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS Sbjct: 132 HNPDSRRLLVVAYNPGVADEMALPPCHSLFQFYVANGRLSCQLYQRSADLFLGVPFNIAS 191 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ--ADLQLSRSPRTLPQMIINPNIVD 238 Y++LT MLA GEF+HT GD HLY+NH QL R PR LP++ I Sbjct: 192 YAILTHMLAQQADLDVGEFVHTFGDCHLYHNHLTDDIVHEQLRRKPRKLPKLKIKRKPQS 251 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + Y+P+ I A ++V Sbjct: 252 MFDYCYEDFEIEGYDPYPTIKAPIAV 277 >gi|304309792|ref|YP_003809390.1| Thymidylate synthase [gamma proteobacterium HdN1] gi|301795525|emb|CBL43723.1| Thymidylate synthase [gamma proteobacterium HdN1] Length = 277 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 171/277 (61%), Positives = 206/277 (74%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLRHV G + DRTG GT S FGYQMRFDL+ GFPL+TTKKVH KS++HELL Sbjct: 1 MKQYLDLLRHVRDHGVRKSDRTGTGTLSVFGYQMRFDLAAGFPLVTTKKVHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ YL HGVSIW+EWA + GELGP+YG QWRSW G +DQI+ ++ +R Sbjct: 61 WFLRGETNIQYLTDHGVSIWNEWATESGELGPVYGKQWRSWDGPHGETVDQIAWLIDEIR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN AL+ ALPPCHCLFQFYV GKLSCQLYQRS Sbjct: 121 NNPDSRRMVVSAWNPALLPDTRVSPRQNAANGLQALPPCHCLFQFYVAEGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 GDVFLG+PFNIASY+LLT+M+A V G Q GEF+H+ GDVHLY NH EQA+ QL+R+P L Sbjct: 181 GDVFLGVPFNIASYALLTLMVAQVTGLQPGEFVHSFGDVHLYLNHLEQAETQLARAPLAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP I ++ FRY+DFTL Y P+ I A V+V Sbjct: 241 PKMQLNPAITNVFDFRYDDFTLTDYAPYDPIRAPVAV 277 >gi|254464749|ref|ZP_05078160.1| thymidylate synthase [Rhodobacterales bacterium Y4I] gi|206685657|gb|EDZ46139.1| thymidylate synthase [Rhodobacterales bacterium Y4I] Length = 277 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 150/277 (54%), Positives = 194/277 (70%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD LRH++ G DRTG GT S FG Q R+ L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYLDQLRHILDNGVPSDDRTGTGTLSCFGMQARYSLADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P Y Sbjct: 61 WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRRFPKLELAEGTTGDEPLYRAG 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQI+ +V+ +R P SRR IVSAWN + MALPPCH L+Q V GK+ QLYQRS Sbjct: 121 SVDQIADLVEMIRKSPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRVAGGKMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LL MLA V G++ G+F+HT+GD H+Y+NH EQ LQLSRSP+ L Sbjct: 181 ADMFLGVPFNIASYALLLAMLAHVTGYEAGDFVHTMGDAHIYSNHVEQVRLQLSRSPKPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+ I + + F+YEDF + +Y+P AI A V+V Sbjct: 241 PQLRIKRQVSSIFDFKYEDFEILNYDPDPAIKAPVAV 277 >gi|291394174|ref|XP_002713484.1| PREDICTED: thymidylate synthase [Oryctolagus cuniculus] Length = 310 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 134/282 (47%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 29 QYLGQIEHILRCGFRKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 88 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD A +D G+LGP+YG QWR + Sbjct: 89 IKGSTNAKELSSKGVKIWDANASRDFLDSLGFSTRQEGDLGPVYGFQWRHFGAEYKDKDS 148 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 149 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 208 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E QL R Sbjct: 209 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHIYLNHIEPLKTQLQR 268 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF L Y PH I +++V Sbjct: 269 EPRPFPKLKILRKVETIDDFKAEDFQLEGYNPHPTIKMEMAV 310 >gi|91215934|ref|ZP_01252903.1| thymidylate synthase [Psychroflexus torquis ATCC 700755] gi|91185911|gb|EAS72285.1| thymidylate synthase [Psychroflexus torquis ATCC 700755] Length = 274 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 157/277 (56%), Positives = 205/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+ H++ G + DRTG GT+S FGYQMRFDL++GFPL+T+KK+H KS+++ELL Sbjct: 1 MKQYHDLISHILNNGIQKGDRTGTGTKSVFGYQMRFDLNEGFPLVTSKKIHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+SYL +GV IW+EWA++DG+LGP+YG QWR+W D IDQI ++ +L+ Sbjct: 61 WFLKGDTNISYLKENGVKIWNEWANEDGDLGPVYGHQWRNWNSED---IDQIKELIHTLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV GKLSCQLYQRS Sbjct: 118 TNPNSRRMMVSAWNPSVMPDTSASFDDNIANGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+L TMM+A V G + G+FIHT GD H+YNNH EQ DLQLSR+ L Sbjct: 178 ADVFLGVPFNIASYALFTMMVAQVCGLKLGDFIHTFGDAHIYNNHLEQVDLQLSRTEIPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + + F++EDFTL +Y+PH I KV++ Sbjct: 238 PTMKLNPEVNSIFDFKFEDFTLENYDPHPHIKGKVAI 274 >gi|149924822|ref|ZP_01913162.1| thymidylate synthase [Plesiocystis pacifica SIR-1] gi|149814302|gb|EDM73904.1| thymidylate synthase [Plesiocystis pacifica SIR-1] Length = 273 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 171/273 (62%), Positives = 206/273 (75%), Gaps = 9/273 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LL V++ G+ + DRTG GT+S FG Q+RFDL++GFPL+TTKKVH +S++HELL Sbjct: 1 MRAYLELLDRVLREGTTKTDRTGTGTKSLFGPQLRFDLAQGFPLVTTKKVHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG---------NVIDQ 111 WFLRG++N++YLH + VSIWDEWAD DGELGPIYG QWRSWP++ IDQ Sbjct: 61 WFLRGETNLAYLHENKVSIWDEWADNDGELGPIYGEQWRSWPNHRADGSADSSQPQTIDQ 120 Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 +S +V LR +P SRR ++SAWNVA + MAL PCHCLFQFYV GKLSCQLYQRS D+F Sbjct: 121 MSWLVDELRRNPDSRRLVISAWNVADLPHMALAPCHCLFQFYVAEGKLSCQLYQRSADLF 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLTMM+A V+G +YGEF+HT GD HLY NH EQA LQLSR PR LP M Sbjct: 181 LGVPFNIASYALLTMMIAKVVGLEYGEFVHTFGDAHLYLNHLEQAQLQLSREPRPLPTMH 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I+ L F YEDF L YEPH I A V+V Sbjct: 241 IDRVPDSLFEFCYEDFRLEGYEPHPRIKAPVAV 273 >gi|256820074|ref|YP_003141353.1| thymidylate synthase [Capnocytophaga ochracea DSM 7271] gi|256581657|gb|ACU92792.1| thymidylate synthase [Capnocytophaga ochracea DSM 7271] Length = 274 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 168/277 (60%), Positives = 208/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLRH++ G + DRTG GT S FGYQMRFDL+KGFPL+TTKK+H KSV++ELL Sbjct: 1 MQTYHDLLRHILDNGYSKDDRTGTGTTSVFGYQMRFDLNKGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGV IW+EWAD++G+LGP+YG QWR W +G IDQI ++V++L+ Sbjct: 61 WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRHW---NGEAIDQIKTVVETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 118 QNPESRRIIVSAWNPSVLPDTGKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLTMMLA V Q G+F+HT GDVH+YNNH EQ LQLSR+PR L Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +N + DL +F Y+DF L Y+P+ I A+VSV Sbjct: 238 PTMHLNRAVKDLFAFDYDDFRLEGYDPYPTIKAQVSV 274 >gi|239814670|ref|YP_002943580.1| thymidylate synthase [Variovorax paradoxus S110] gi|239801247|gb|ACS18314.1| thymidylate synthase [Variovorax paradoxus S110] Length = 289 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 154/269 (57%), Positives = 191/269 (71%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH +S++ ELLWF Sbjct: 21 QYEDFMRHVDTHGVHKSDRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLRSIIQELLWF 80 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G SN ++L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS ++++L+ + Sbjct: 81 LTGSSNNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKTN 140 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + KMAL PCH FQFYV GKLSCQLYQRS D+FLG+P Sbjct: 141 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPPQAPGERGKLSCQLYQRSADIFLGVP 200 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A G+FI T GD H+Y+NH EQ LQLSR+P P + I Sbjct: 201 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVALQLSRTPYPYPTLHIKRK 260 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++YEDF + Y H I A V+V Sbjct: 261 PASIFDYQYEDFEVLDYRHHDPIKAPVAV 289 >gi|254496004|ref|ZP_05108907.1| thymidylate synthase [Legionella drancourtii LLAP12] gi|254354753|gb|EET13385.1| thymidylate synthase [Legionella drancourtii LLAP12] Length = 264 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 196/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+ YL LL+H+++ G+++ DRTG GT S FGYQMRFDL +GFPL+TTKK+H +S+VHELL Sbjct: 1 MNTYLHLLKHILQQGTEKTDRTGTGTLSVFGYQMRFDLRQGFPLVTTKKLHMRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL +GVSIWDEWAD +G LGP+YG QWR+WP DG IDQ+S++V ++ Sbjct: 61 WFLKGDTNIAYLKENGVSIWDEWADNNGNLGPVYGKQWRNWPTADGRHIDQLSAVVAQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWNV +++MAL PCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNTLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+FI T GD HLY NH EQA QL R P L + I L Sbjct: 181 YALLTHMVAQQCNLEVGDFIWTGGDCHLYLNHLEQARTQLQREPLPLATLNIQRKPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF +Y+ H AI A ++V Sbjct: 241 EYVYDDFEFANYQSHPAIKAPIAV 264 >gi|309389314|gb|ADO77194.1| thymidylate synthase [Halanaerobium praevalens DSM 2228] Length = 263 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 204/264 (77%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL + +H++ G DR DRTG GTRS FGYQ+RF+L KGFPLLTTKK++WK++VHELL Sbjct: 1 MKKYLKMCQHILDNGVDREDRTGTGTRSVFGYQLRFNLKKGFPLLTTKKIYWKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ + V IWDEWAD+ G+LG IYG QWR+W DG IDQIS +++ ++ Sbjct: 61 WFLKGDTNIKYLNDNNVHIWDEWADEHGDLGHIYGHQWRNWEGKDG-TIDQISEVIEQIK 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +V+AWNV ++ MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS Sbjct: 120 TNPNSRRLLVNAWNVGDLENMALPPCHLLFQFYVADGKLSCQLYQRSCDTFLGVPFNIAS 179 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A V+G + G+FI + GDVH+Y+NHFEQ QL R PR L Q+ +NP I +L Sbjct: 180 YSLLTHMIAQVVGLEVGDFIWSGGDVHIYHNHFEQIKKQLKRKPRDLAQIKLNPKINNLF 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YED L +Y PH I KVSV Sbjct: 240 DFKYEDIKLLNYNPHPLIKGKVSV 263 >gi|152968378|ref|YP_001364162.1| Thymidylate synthase [Kineococcus radiotolerans SRS30216] gi|189036937|sp|A6WGF9|TYSY_KINRD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|151362895|gb|ABS05898.1| Thymidylate synthase [Kineococcus radiotolerans SRS30216] Length = 268 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 156/262 (59%), Positives = 201/262 (76%), Gaps = 2/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLRHV+ G+ + DRTG GTRS FG+Q+R+DLS GFPL+TTK+VH+KS+ ELLWF Sbjct: 9 QYEDLLRHVLATGTPKSDRTGTGTRSVFGHQLRYDLSAGFPLVTTKRVHFKSIALELLWF 68 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGD NV +L GV+IWDEWAD++G+LGP+YGVQWRSWP DG +DQI+ ++ +LR D Sbjct: 69 LRGDGNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGRHVDQIAQVLHTLRTD 128 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNVA +D+MAL PCH FQF+V +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 129 PDSRRMVVSAWNVAELDRMALAPCHAFFQFHVADGKLSCQLYQRSADLFLGVPFNIASYA 188 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT ++A+ +G + G+F+ T GDVH+Y+NH EQ QL+R+P P++ + P L Sbjct: 189 LLTHLVAAEVGLEVGDFVWTGGDVHVYDNHVEQVTEQLTRTPYPFPRLAVRPAG--LFEH 246 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YEDF + Y H AI A V+V Sbjct: 247 EYEDFEVLDYRHHPAIKAPVAV 268 >gi|260220887|emb|CBA28903.1| Thymidylate synthase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 296 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 153/270 (56%), Positives = 195/270 (72%), Gaps = 8/270 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH +S++ ELLWF Sbjct: 27 QYEDFMRHVHTTGVFKSDRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLRSIIQELLWF 86 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 L G SN ++L GV+IWDEWA+ + G+LGP+YGVQWRSWP DG IDQI+ ++++L++ Sbjct: 87 LTGSSNNNWLKERGVTIWDEWANPETGDLGPVYGVQWRSWPTPDGGHIDQIADVIKTLKS 146 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGI 174 +P SRR IVSAWNVA + KMAL PCH FQFYV G+LSCQLYQRS D+FLG+ Sbjct: 147 NPDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPATEPGGKGRLSCQLYQRSADIFLGV 206 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT M+A G+FI T GD H+Y+NH EQ +LQLSR+P P + I Sbjct: 207 PFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHTEQVELQLSRAPMAYPTLNIKR 266 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +++EDF + YE H AI A V+V Sbjct: 267 KPESIFDYQFEDFEVLGYECHPAIKAPVAV 296 >gi|91787702|ref|YP_548654.1| thymidylate synthase [Polaromonas sp. JS666] gi|123165061|sp|Q12CI6|TYSY_POLSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|91696927|gb|ABE43756.1| thymidylate synthase [Polaromonas sp. JS666] Length = 284 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 155/269 (57%), Positives = 192/269 (71%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH KS+V ELLWF Sbjct: 16 QYEDFMRHVDAHGVFKADRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLKSIVQELLWF 75 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G S+ ++L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS ++++L+ + Sbjct: 76 LTGSSDNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKTN 135 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + KMAL PCH FQFYV GKLSCQLYQRS D+FLG+P Sbjct: 136 PDSRRIIVSAWNVADLSKMALMPCHAFFQFYVAPATEAGGKGKLSCQLYQRSADIFLGVP 195 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNI SY+LLT M+A G+FI T GD H+Y+NH EQ LQLSR+P P + I Sbjct: 196 FNIGSYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVALQLSRAPFPYPTLHIKRK 255 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++++DF Y+ HAAI A V+V Sbjct: 256 PESIFDYQFDDFEFLDYQHHAAIKAPVAV 284 >gi|262274909|ref|ZP_06052720.1| thymidylate synthase [Grimontia hollisae CIP 101886] gi|262221472|gb|EEY72786.1| thymidylate synthase [Grimontia hollisae CIP 101886] Length = 279 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 148/279 (53%), Positives = 191/279 (68%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G+DR DRTGVGTRS FG QMRFDLS+GFPLLTTKK++ ++++HELL Sbjct: 1 MKQYLDLMQDILDNGTDRGDRTGVGTRSVFGRQMRFDLSEGFPLLTTKKLYTRAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL + V+IWDEWA + G+LGP+YG QWRSW DG+ +DQI+ +++ ++ Sbjct: 61 WFLNGDTNVKYLQDNKVTIWDEWATETGDLGPVYGAQWRSWACPDGSTVDQIAELIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRRHI++AWN A + KMAL PCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 TKPNSRRHIITAWNPADLPDESISPQANAEQGKMALAPCHCLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ--ADLQLSRSPR 225 D FLG+PFNIASY+L T M+A GEF+HT GDVHLY+NH QL R P Sbjct: 181 ADYFLGVPFNIASYALFTHMIAQQCDLDVGEFVHTFGDVHLYHNHLTDDIVYEQLKREPG 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++ EDF + YE I A +++ Sbjct: 241 KRPTLKIKRKPASIFDYKLEDFEIEGYEAQPTIKAPIAI 279 >gi|257070033|ref|YP_003156288.1| thymidylate synthase [Brachybacterium faecium DSM 4810] gi|256560851|gb|ACU86698.1| thymidylate synthase [Brachybacterium faecium DSM 4810] Length = 267 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 153/261 (58%), Positives = 192/261 (73%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G + DRTG GTRS FG Q+RFDLS+GFPL+TTK+VH +S++ ELLWFL Sbjct: 7 YEDLLREVMETGHAKGDRTGTGTRSLFGKQIRFDLSQGFPLITTKRVHTRSIILELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+NV +L GVSIWDEWAD++G+LGP+YG QWRSWP DG VIDQI+ +V+ +R +P Sbjct: 67 RGDTNVRWLQERGVSIWDEWADENGDLGPVYGAQWRSWPTPDGGVIDQITDVVEQIRTNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWN A I +MAL PCH LFQF V +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRLIVSAWNPADIPQMALAPCHALFQFEVHDGKLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A + G+F+ T GD H+Y+NH EQ QLSR P P++ I +L + Sbjct: 187 LTHMVAQQTDLEVGDFVWTGGDCHIYDNHHEQVQRQLSREPFPSPRLRIARRPESILDYE 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ED + Y+ H I A V+V Sbjct: 247 LEDIEILDYQHHKGIKAPVAV 267 >gi|118467946|ref|YP_887007.1| thymidylate synthase [Mycobacterium smegmatis str. MC2 155] gi|166231713|sp|A0QVR9|TYSY_MYCS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|118169233|gb|ABK70129.1| thymidylate synthase [Mycobacterium smegmatis str. MC2 155] Length = 266 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 166/261 (63%), Positives = 202/261 (77%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V + G+ + DRTG GTRS FG+QMR+DLS GFPL+TTKKVH KSV++ELLWFL Sbjct: 7 YEDLLRLVTERGTPKSDRTGTGTRSLFGHQMRYDLSAGFPLITTKKVHTKSVIYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L HGV+IWDEWA + G+LGPIYGVQWRSWP G IDQISS ++ L++DP Sbjct: 67 RGDSNVRWLQEHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISSALELLKSDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ LQLSR PR P++++ P + + Sbjct: 187 LTHMMAAQAGLDVGEFIWTGGDCHIYDNHTEQVALQLSREPRPYPELVLAPR-DSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + +Y+PH AI A V+V Sbjct: 246 YEDIAIVNYDPHPAIKAPVAV 266 >gi|296139474|ref|YP_003646717.1| thymidylate synthase [Tsukamurella paurometabola DSM 20162] gi|296027608|gb|ADG78378.1| thymidylate synthase [Tsukamurella paurometabola DSM 20162] Length = 265 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 156/261 (59%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ R DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KS+ +ELLWFL Sbjct: 6 YEDLLRDVLANGTHRPDRTGTGTRSVFGRQLRYDLSEGFPLITTKRVHMKSIAYELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L HGV+IWDEWAD +GELGP+YGVQWRSWP +G IDQI++ ++ L+ DP Sbjct: 66 RGDSNVRWLQEHGVTIWDEWADANGELGPVYGVQWRSWPTPNGEHIDQIATAIELLKTDP 125 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ I+ MALPPCH FQFY +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 126 SSRRNIVSAWNVSEIENMALPPCHAFFQFYAADGKLSCQLYQRSADLFLGVPFNIASYAL 185 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ +G + G+F+ T GD H+Y+NH EQ QLSR P P++ + + + Sbjct: 186 LTHMVAAQVGLEPGDFVWTGGDCHIYDNHVEQVTEQLSREPYPYPRLELAERP-SIFDYE 244 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y D T+ Y+ H AI A V+V Sbjct: 245 YGDITVHDYQHHPAIKAPVAV 265 >gi|297625969|ref|YP_003687732.1| Thymidylate synthase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921734|emb|CBL56292.1| Thymidylate synthase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 270 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 157/270 (58%), Positives = 202/270 (74%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G D+ DRTGVGTRS FG+QMRF L+ GFPL+TTKK++ + V ELL Sbjct: 1 MRQYLDLLTRVMDEGIDKSDRTGVGTRSVFGHQMRFHLADGFPLVTTKKIYTRGVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +LHR+ V IWDEWAD++G+LGP+YG QWRSWP G +DQ++ ++ ++ Sbjct: 61 WFLRGDTNIGWLHRNNVHIWDEWADENGDLGPVYGHQWRSWPVPGGGHVDQLAKVIDQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------NGKLSCQLYQRSGDVFLGI 174 DP SRR +VSAWNVA +D MALPPCH LFQFYV GKLSC LYQRS D+FLG+ Sbjct: 121 NDPNSRRLVVSAWNVAEVDDMALPPCHLLFQFYVTPGEDGQPGKLSCGLYQRSADLFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT M+A V G G+F+HTLGD H+Y+NHF+Q QLSR+P+ LP++ +NP Sbjct: 181 PFNIASYALLTHMVAQVCGLGVGDFVHTLGDAHIYHNHFDQVAEQLSRTPKALPRLALNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++ F D T+ YEP AI A ++V Sbjct: 241 QVRNIDEFELSDITVEGYEPDPAIKAPIAV 270 >gi|108799079|ref|YP_639276.1| thymidylate synthase [Mycobacterium sp. MCS] gi|119868194|ref|YP_938146.1| thymidylate synthase [Mycobacterium sp. KMS] gi|126434685|ref|YP_001070376.1| thymidylate synthase [Mycobacterium sp. JLS] gi|123070298|sp|Q1BA64|TYSY_MYCSS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231714|sp|A3PYA8|TYSY_MYCSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231715|sp|A1UEU8|TYSY_MYCSK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|108769498|gb|ABG08220.1| thymidylate synthase [Mycobacterium sp. MCS] gi|119694283|gb|ABL91356.1| thymidylate synthase [Mycobacterium sp. KMS] gi|126234485|gb|ABN97885.1| thymidylate synthase [Mycobacterium sp. JLS] Length = 266 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 161/261 (61%), Positives = 199/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V + G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KSVV+ELLWFL Sbjct: 7 YEDLLRLVFERGTPKSDRTGTGTRSLFGHQMRYDLAAGFPLITTKKVHLKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L HGV+IWDEWA + GELGP+YGVQWRSWP G +DQIS+ V LR DP Sbjct: 67 RGESNVRWLQEHGVTIWDEWASETGELGPVYGVQWRSWPTPSGGHVDQISAAVDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ QLSR PR P++++ + + Sbjct: 187 LTHMMAAQAGLGVGEFVWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAQR-DSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++Y+PH AI A V+V Sbjct: 246 YEDVVVKNYDPHPAIKAPVAV 266 >gi|149371858|ref|ZP_01891177.1| thymidylate synthetase [unidentified eubacterium SCB49] gi|149354998|gb|EDM43559.1| thymidylate synthetase [unidentified eubacterium SCB49] Length = 274 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 159/277 (57%), Positives = 209/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+HV+K G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKKVH KS+++ELL Sbjct: 1 MKQYHDLLKHVLKEGTLKADRTGTGTKSVFGYQMRFDLSEGFPMVTTKKVHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD++G LGP+YG QWR+W + IDQI+ I+++L+ Sbjct: 61 WFLKGDTNIEYLKENGVRIWNEWADENGNLGPVYGHQWRNW---NSEGIDQIADIIETLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPDSRRMMVSAWNPSVMPDTSKPFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR R L Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQIELQLSRDIRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP+I D+ F ++ FTL Y PH I V++ Sbjct: 238 PKMTLNPDIKDIFGFTFDSFTLTDYNPHPHIKGAVAI 274 >gi|15609901|ref|NP_217280.1| thymidylate synthase [Mycobacterium tuberculosis H37Rv] gi|31793939|ref|NP_856432.1| thymidylate synthase [Mycobacterium bovis AF2122/97] gi|121638643|ref|YP_978867.1| thymidylate synthase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662606|ref|YP_001284129.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra] gi|167968591|ref|ZP_02550868.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra] gi|215428196|ref|ZP_03426115.1| thymidylate synthase [Mycobacterium tuberculosis T92] gi|219558774|ref|ZP_03537850.1| thymidylate synthase [Mycobacterium tuberculosis T17] gi|224991135|ref|YP_002645824.1| thymidylate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|254232862|ref|ZP_04926189.1| thymidylate synthase thyA [Mycobacterium tuberculosis C] gi|254365415|ref|ZP_04981460.1| thymidylate synthase thyA [Mycobacterium tuberculosis str. Haarlem] gi|289444308|ref|ZP_06434052.1| thymidylate synthase [Mycobacterium tuberculosis T46] gi|289448420|ref|ZP_06438164.1| thymidylate synthase thyA [Mycobacterium tuberculosis CPHL_A] gi|289570943|ref|ZP_06451170.1| thymidylate synthase thyA [Mycobacterium tuberculosis T17] gi|289575461|ref|ZP_06455688.1| thymidylate synthase thyA [Mycobacterium tuberculosis K85] gi|289746567|ref|ZP_06505945.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987] gi|289751421|ref|ZP_06510799.1| thymidylate synthase thyA [Mycobacterium tuberculosis T92] gi|289754869|ref|ZP_06514247.1| thymidylate synthase [Mycobacterium tuberculosis EAS054] gi|289758891|ref|ZP_06518269.1| thymidylate synthase [Mycobacterium tuberculosis T85] gi|298526231|ref|ZP_07013640.1| thymidylate synthase thyA [Mycobacterium tuberculosis 94_M4241A] gi|308377122|ref|ZP_07441195.2| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu008] gi|308405964|ref|ZP_07494573.2| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu012] gi|54039796|sp|P67045|TYSY_MYCBO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54042282|sp|P67044|TYSY_MYCTU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231712|sp|A1KMA6|TYSY_MYCBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231716|sp|A5U6B7|TYSY_MYCTA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790245|sp|C1AFM7|TYSY_MYCBT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|2624286|emb|CAA15560.1| PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) [Mycobacterium tuberculosis H37Rv] gi|31619533|emb|CAD94971.1| PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) [Mycobacterium bovis AF2122/97] gi|121494291|emb|CAL72769.1| Probable thymidylate synthase thyA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601921|gb|EAY60931.1| thymidylate synthase thyA [Mycobacterium tuberculosis C] gi|134150928|gb|EBA42973.1| thymidylate synthase thyA [Mycobacterium tuberculosis str. Haarlem] gi|148506758|gb|ABQ74567.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra] gi|224774250|dbj|BAH27056.1| thymidylate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|289417227|gb|EFD14467.1| thymidylate synthase [Mycobacterium tuberculosis T46] gi|289421378|gb|EFD18579.1| thymidylate synthase thyA [Mycobacterium tuberculosis CPHL_A] gi|289539892|gb|EFD44470.1| thymidylate synthase thyA [Mycobacterium tuberculosis K85] gi|289544697|gb|EFD48345.1| thymidylate synthase thyA [Mycobacterium tuberculosis T17] gi|289687095|gb|EFD54583.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987] gi|289692008|gb|EFD59437.1| thymidylate synthase thyA [Mycobacterium tuberculosis T92] gi|289695456|gb|EFD62885.1| thymidylate synthase [Mycobacterium tuberculosis EAS054] gi|289714455|gb|EFD78467.1| thymidylate synthase [Mycobacterium tuberculosis T85] gi|298496025|gb|EFI31319.1| thymidylate synthase thyA [Mycobacterium tuberculosis 94_M4241A] gi|308348858|gb|EFP37709.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu008] gi|308364984|gb|EFP53835.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu012] gi|326904379|gb|EGE51312.1| thymidylate synthase thyA [Mycobacterium tuberculosis W-148] Length = 263 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 202/264 (76%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELL Sbjct: 1 MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSN+ +LH HGV+IWDEWA GELGPIYGVQWRSWP G IDQIS+ + LR Sbjct: 61 WFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV I++MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A+ G GEFI T GD H+Y+NH EQ LQLSR PR P++++ + + Sbjct: 181 YALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIF 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YED +++Y+PH AI A V+V Sbjct: 240 EYTYEDIVVKNYDPHPAIKAPVAV 263 >gi|260886113|ref|ZP_05736540.2| thymidylate synthase [Prevotella tannerae ATCC 51259] gi|260850704|gb|EEX70573.1| thymidylate synthase [Prevotella tannerae ATCC 51259] Length = 340 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL + G+ + DRTG GT+S FG+QMRF ++ GFPLLTTKK+H KS++HELL Sbjct: 77 MKQYLDLLNEINTHGTVKHDRTGTGTKSIFGHQMRFQMADGFPLLTTKKLHVKSIIHELL 136 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RG++N+ L GVSIWDEWAD++G+LGPIYG QWR WPD G IDQ++ V+ ++ Sbjct: 137 WFIRGETNIKSLKEAGVSIWDEWADENGDLGPIYGYQWRHWPDGRGGEIDQLAQAVELIK 196 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV I++M LPPCH LFQ+YV +G+LS QLYQRS D FLG+PFNIAS Sbjct: 197 HKPDSRRIIVSAWNVGDIERMKLPPCHILFQYYVADGRLSLQLYQRSADTFLGVPFNIAS 256 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MM A V + G+FI+T GD HLY NH EQA LQL+R+P LP M +NP L Sbjct: 257 YALLLMMTAQVTDLEPGDFIYTTGDTHLYLNHLEQARLQLTRTPGLLPTMRLNPERRRLE 316 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y P I A VSV Sbjct: 317 DFRYEDFELIDYNPQPHIAAPVSV 340 >gi|326432420|gb|EGD77990.1| thymidylate synthase [Salpingoeca sp. ATCC 50818] Length = 293 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 136/283 (48%), Positives = 187/283 (66%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 H+YL L++ ++ G R DRTG GT S FG QMRF L +GFPLLTTK+V W+ V+ ELLW Sbjct: 11 HEYLRLVQRILDTGKTRSDRTGTGTISLFGAQMRFSLREGFPLLTTKRVFWRGVLEELLW 70 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F+ GD+N ++L V IWD ++G+LGP+YG QWR + Sbjct: 71 FIAGDTNANHLAEKKVHIWDANGSKEFLEQRGLGHREEGDLGPVYGFQWRHFGAQYTDMH 130 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQI+++++ ++ +P SRR I+SAWN + MALPPCH L QFYV +G+LSC Sbjct: 131 ADYQGKGVDQIANVIEQIKTNPDSRRIIMSAWNPVDLPHMALPPCHVLAQFYVQDGELSC 190 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT+M+A V G + G+F+HT+GD H+Y+NH + QL+ Sbjct: 191 QLYQRSADMGLGVPFNIASYSLLTVMIAHVCGLRPGDFVHTIGDAHVYSNHVDALKEQLT 250 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I ++ + F+ EDF L Y+PH I K++V Sbjct: 251 REPRPFPTLNIKRDVTSIDDFKAEDFELVGYKPHGKIAMKMAV 293 >gi|224046130|ref|XP_002194568.1| PREDICTED: thymidylate synthetase [Taeniopygia guttata] Length = 393 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 138/283 (48%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL +RH+++ G R DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLW Sbjct: 111 QQYLQQVRHILQHGHRREDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLW 170 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F++G +N L GV IWD ++G+LGP+YG QWR + Sbjct: 171 FIKGSTNAKELSAKGVKIWDANGSREFLDKQGFSTREEGDLGPVYGFQWRHFGAEYKDMH 230 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY +DQ+ ++++++ +P RR I+ AWN I MALPPCH L QFYV NG+LSC Sbjct: 231 TDYSNQGVDQLQKVIETIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSC 290 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E +QL Sbjct: 291 QLYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQ 350 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I I D+ +F+ EDF + Y PH I +++V Sbjct: 351 REPRPFPKLKILREIKDISNFKAEDFQIEDYNPHPPIKMEMAV 393 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 13/93 (13%) Query: 37 DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD----------- 85 + S FPLLTTK+V WK V+ ELLWF++G +N L GV IWD Sbjct: 31 NESNQFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSAKGVKIWDANGSREFLDKHRFST 90 Query: 86 -KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 +DG+LGP+ R P + + Q+ I+Q Sbjct: 91 REDGDLGPVXXXXXRPEPG-EQQYLQQVRHILQ 122 >gi|326316306|ref|YP_004233978.1| thymidylate synthase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373142|gb|ADX45411.1| thymidylate synthase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 279 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 160/269 (59%), Positives = 195/269 (72%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GTRS FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF Sbjct: 11 QYEDFMRHVYTHGIAKGDRTGTGTRSVFGHQMRFDLNEGFPLVTTKKVHLKSIITELLWF 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G S+ +L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS +V++LR + Sbjct: 71 LTGSSSNHWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISQVVETLRTN 130 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA +DKMAL PCH FQFYV G+LSCQLYQRS D+FLG+P Sbjct: 131 PDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPPQAAGERGRLSCQLYQRSADIFLGVP 190 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A G+FI T GD H+Y+NHFEQ +LQL+R+P P + I Sbjct: 191 FNIASYALLTHMMAQQCNLDVGDFIWTGGDCHIYSNHFEQVELQLARAPHPYPTLHILRR 250 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +R+EDF +R Y H AI A V+V Sbjct: 251 PDSLFDYRFEDFEVRDYAHHPAIKAPVAV 279 >gi|184200215|ref|YP_001854422.1| thymidylate synthase [Kocuria rhizophila DC2201] gi|183580445|dbj|BAG28916.1| thymidylate synthase [Kocuria rhizophila DC2201] Length = 273 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 150/266 (56%), Positives = 189/266 (71%), Gaps = 5/266 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GT S FG Q+R+DLS FPLLTTK+VH++S+ ELLWFL Sbjct: 8 YEDLLRDVLEHGTPKTDRTGTGTLSVFGRQIRYDLSHSFPLLTTKRVHFRSLALELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 G SNV +L GVSIWDEWAD++G+LGP+YGVQWRSWP G IDQI+ +V+S+R P Sbjct: 68 SGSSNVRWLQERGVSIWDEWADENGDLGPVYGVQWRSWPAGHGETIDQIARVVESIRTTP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVFLGIPFNI 178 SRRHIV+AWN A +D+MALPPCH LFQFYV + LSCQLYQRS D+FLG+PFNI Sbjct: 128 DSRRHIVTAWNPAEVDRMALPPCHALFQFYVQPREDGPDALSCQLYQRSADLFLGVPFNI 187 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 ASY+LLT+M+A GEF+ T GD H+Y NH EQ QL+R P P + + Sbjct: 188 ASYALLTVMVAQQCDLVPGEFVWTGGDCHIYTNHLEQVRTQLAREPYPYPTLRLTRRPDS 247 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + +R+EDF + Y+ H I A V+V Sbjct: 248 IFDYRFEDFAVEGYQHHPGIKAPVAV 273 >gi|326917497|ref|XP_003205035.1| PREDICTED: LOW QUALITY PROTEIN: thymidylate synthase-like [Meleagris gallopavo] Length = 397 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 135/280 (48%), Positives = 177/280 (63%), Gaps = 20/280 (7%) Query: 5 LDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR 64 L +RH+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF++ Sbjct: 118 LQQVRHILQHGXPKEDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWFIK 177 Query: 65 GDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP--------DY 104 G +N L GV IWD + ++G+LGP+YG QWR + DY Sbjct: 178 GSTNAKELSAKGVKIWDANGSREFLDKQGFCSREEGDLGPVYGFQWRHFGAEYKDMHTDY 237 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 +DQ+ +++ ++ +P RR I+ AWN I MALPPCH L QFYV NG+LSCQLY Sbjct: 238 SNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQLY 297 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E +QL R P Sbjct: 298 QRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQREP 357 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R LP++ I + D+ F+ EDF + Y PH I +++V Sbjct: 358 RPLPKLKILRKVEDISDFKAEDFQIEDYNPHPPIKMEMAV 397 >gi|118617725|ref|YP_906057.1| thymidylate synthase [Mycobacterium ulcerans Agy99] gi|166231717|sp|A0PQG7|TYSY_MYCUA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|118569835|gb|ABL04586.1| thymidylate synthase ThyA [Mycobacterium ulcerans Agy99] Length = 266 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 162/261 (62%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG Q+R+DL GFPLLTTKKVH+KSVV+ELLWFL Sbjct: 7 YEDLLRRVLETGTAKSDRTGTGTRSLFGQQIRYDLGCGFPLLTTKKVHFKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +HGV+IWDEWA + G+LGPIYGVQWRSWP G IDQIS+ ++ LR DP Sbjct: 67 RGDSNVGWLQQHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISAALELLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGQIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ QL R PR P++ ++ + + Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVTEQLRREPRPYPKLSLSQR-DSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED ++ Y+PH AI A V+V Sbjct: 246 YEDVVVQDYDPHPAIKAPVAV 266 >gi|168335169|ref|ZP_02693275.1| thymidylate synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 259 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 146/264 (55%), Positives = 196/264 (74%), Gaps = 5/264 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+++++ G + DRTGVGT STFGYQMRF+L++GFPL+T K+ ++K + HELL Sbjct: 1 MKQYKDLVQYIMDNGVYKEDRTGVGTISTFGYQMRFNLAEGFPLVTLKRTYFKGIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL V IWDEWAD++G+LGP+YG QWRS+ +DQI+ +++ ++ Sbjct: 61 WFLSGXTNIKYLVDKNVHIWDEWADENGDLGPVYGAQWRSFS-----GVDQIAHVIEEIK 115 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++P SRR IV+AWNV I+KMALPPCH FQFYV GKLSCQ+YQRS D FLG+PFNIAS Sbjct: 116 SNPDSRRLIVTAWNVPEIEKMALPPCHMFFQFYVAEGKLSCQMYQRSADTFLGVPFNIAS 175 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLL M+A+V + G+F+HT+GD H+Y NH +Q L L R P++LP++ I + + Sbjct: 176 YSLLVHMIAAVTDLEVGDFVHTIGDAHIYTNHLQQVKLMLKREPKSLPKIRILRKVDSIF 235 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRYEDF L Y PH AI A+V+V Sbjct: 236 DFRYEDFELLDYNPHKAIKAEVAV 259 >gi|319792495|ref|YP_004154135.1| thymidylate synthase [Variovorax paradoxus EPS] gi|315594958|gb|ADU36024.1| thymidylate synthase [Variovorax paradoxus EPS] Length = 280 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 154/269 (57%), Positives = 190/269 (70%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY D +RHV G + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF Sbjct: 12 QYEDFMRHVDTHGVFKSDRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLKSIIQELLWF 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G SN ++L GV+IWDEWA +DG+LGP+YGVQWRSWP DG IDQIS ++++L+ + Sbjct: 72 LTGSSNNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISDVIKTLKTN 131 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + KMAL PCH FQFYV GKLSCQLYQRS D+FLG+P Sbjct: 132 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPPQAEGERGKLSCQLYQRSADIFLGVP 191 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A G+FI T GD H+Y+NH EQ LQLSR P P + I Sbjct: 192 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVKLQLSRDPYPYPTLNIKRK 251 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++YEDF + Y+ I A V+V Sbjct: 252 PDSIFDYQYEDFEVLDYKHGDPIKAPVAV 280 >gi|308235845|ref|ZP_07666582.1| thymidylate synthase [Gardnerella vaginalis ATCC 14018] gi|311114431|ref|YP_003985652.1| thymidylate synthase [Gardnerella vaginalis ATCC 14019] gi|310945925|gb|ADP38629.1| thymidylate synthase [Gardnerella vaginalis ATCC 14019] Length = 290 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 150/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG Q+RFDLSK FPL+TTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILMEGTLKSDRTGTGTISLFGQQIRFDLSKSFPLITTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119 +G SNV +L +GV IWDEWAD++G+LGP+YGVQWRSWP IDQI+++++ + Sbjct: 87 KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTQENPNRTIDQIANVMELI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNHPDSRRMIVSAWNPAEVENMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P PQ+ I + Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEI-RKADSI 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 S+ Y DF + Y+ H I A V+V Sbjct: 266 FSYDYSDFKVVDYKHHPTIKAPVAV 290 >gi|297242824|ref|ZP_06926762.1| thymidylate synthase [Gardnerella vaginalis AMD] gi|296889035|gb|EFH27769.1| thymidylate synthase [Gardnerella vaginalis AMD] Length = 290 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 148/265 (55%), Positives = 188/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----NVIDQISSIVQSL 119 +G SNV +L +GV IWDEWAD++G+LGP+YGVQWRSWP IDQI++++ + Sbjct: 87 KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P PQ+ I + Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEI-RKADSI 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y+ H I A V+V Sbjct: 266 FDYDYSDFKVVDYKHHPTIKAPVAV 290 >gi|315122502|ref|YP_004062991.1| thymidylate synthase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495904|gb|ADR52503.1| thymidylate synthase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 264 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 234/264 (88%), Positives = 249/264 (94%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LLRHVI GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH KSV++ELL Sbjct: 1 MRQYLNLLRHVITSGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G SN+SYLH+HGVSIWDEWA KDG+LGPIYGVQWRSWPDYDGN IDQISSI++SLR Sbjct: 61 WFLKGGSNISYLHQHGVSIWDEWASKDGDLGPIYGVQWRSWPDYDGNTIDQISSIIRSLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD+GKLSCQLYQRSGDVFLGIPFNIAS Sbjct: 121 TDPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDDGKLSCQLYQRSGDVFLGIPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLTMMLASVIGF+YGEFIHTLGDVHLYNNHFEQA LQLSRSP+ P MIINPN+VDL Sbjct: 181 YSLLTMMLASVIGFRYGEFIHTLGDVHLYNNHFEQAHLQLSRSPKKTPHMIINPNVVDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SF+YEDFTL SYEPHAAI AKV+V Sbjct: 241 SFQYEDFTLESYEPHAAIPAKVTV 264 >gi|296274222|ref|YP_003656853.1| thymidylate synthase [Arcobacter nitrofigilis DSM 7299] gi|296098396|gb|ADG94346.1| thymidylate synthase [Arcobacter nitrofigilis DSM 7299] Length = 287 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 153/287 (53%), Positives = 198/287 (68%), Gaps = 23/287 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFPL+TTKK H K+++ ELL Sbjct: 1 MKQYLDLMKHVLENGTLKEDRTGTGTKSVFGYQMRFDLSEGFPLVTTKKCHLKAIISELL 60 Query: 61 WFLRGDSNVSYLHRH-----------GVSIWDEWADKDG------------ELGPIYGVQ 97 WFL G ++ L ++W AD G ELGP+YG Q Sbjct: 61 WFLEGSTDERRLAEIHYGDKAENIIGKKTVWTANADNQGVALGYENSDTVKELGPVYGSQ 120 Query: 98 WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 WRSW DG IDQ+S +++ ++ +P SRR I+SAWNVA I+KMALPPCH FQFYV NG Sbjct: 121 WRSWKTNDGKAIDQVSELIEQIKNNPDSRRLILSAWNVAEIEKMALPPCHTFFQFYVANG 180 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 KLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V + G+F+HT GD HLY+NH EQA+ Sbjct: 181 KLSCQLYQRSADIFLGVPFNIASYALLTMMVAQVCDLEVGDFVHTFGDAHLYSNHLEQAN 240 Query: 218 LQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LQ++R P P M INP+I ++ F+ EDF L +Y+ H I ++V Sbjct: 241 LQITREPFPKPTMKINPDIKNIFDFKMEDFELSNYQAHEHIKGVMAV 287 >gi|315444918|ref|YP_004077797.1| thymidylate synthase [Mycobacterium sp. Spyr1] gi|315263221|gb|ADT99962.1| thymidylate synthase [Mycobacterium sp. Spyr1] Length = 266 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 160/261 (61%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 7 YEDLLRLVLDTGTPKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV+IWDEWA G+LGP+YGVQWRSWP G IDQIS+ + L+ DP Sbjct: 67 RGDSNVRWLQERGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGEHIDQISAALDLLKHDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ QLSR PR P++++ P + + Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAPR-DSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++YEPH AI A V++ Sbjct: 246 YEDVVIKNYEPHPAIKAPVAI 266 >gi|294084290|ref|YP_003551048.1| thymidylate synthase protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663863|gb|ADE38964.1| thymidylate synthase protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 264 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 202/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G DR DRTG GTR+ FG+QMRFDL+ GFP+LTTKK+H KS++HELL Sbjct: 1 MQQYLDLLARVMDEGIDRDDRTGTGTRAVFGHQMRFDLADGFPVLTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR W DG IDQ++ +++ +R Sbjct: 61 WFISGDTNIRYLQDNGVSIWDEWADENGDLGPVYGQQWRRWKTPDGAEIDQLAELIRMIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR ++SAWN A I MALPPCHCLFQF V +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 ETPTSRRLMLSAWNPADIPNMALPPCHCLFQFQVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + + G F+HTLGD H+Y NHF+QA LQL+R+P LP+++I+ D+ Sbjct: 181 YALLTHMIAVICDLEAGTFVHTLGDAHIYANHFDQARLQLTRTPGALPKLLIHNRPKDID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDF + Y A I A ++V Sbjct: 241 GFKFEDFEIIDYNAQAHISAPIAV 264 >gi|154507538|ref|ZP_02043180.1| hypothetical protein ACTODO_00017 [Actinomyces odontolyticus ATCC 17982] gi|153799327|gb|EDN81747.1| hypothetical protein ACTODO_00017 [Actinomyces odontolyticus ATCC 17982] Length = 267 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 149/263 (56%), Positives = 191/263 (72%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY DLL +++ G+ + DRTG GTRS FG Q+R+DLSKGFPL+TTK+VH KSVV ELLW Sbjct: 6 RQYEDLLARIMREGTPKGDRTGTGTRSLFGAQLRYDLSKGFPLITTKRVHLKSVVGELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL G SNVS+L +G+ IW+EWADKDGELGP+YGVQWRSW DG IDQIS ++++L+ Sbjct: 66 FLSGSSNVSWLQDNGIRIWNEWADKDGELGPVYGVQWRSWNAGDGRHIDQISQVLETLKT 125 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR +VSAWNV + +MAL PCH FQ YV +G+LS QLYQRS D+FLG+PFNIASY Sbjct: 126 NPDSRRMVVSAWNVGDLPQMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASY 185 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 SLLT M A G + G+FI T GD H+Y+NH EQ QLSR P P++ + + Sbjct: 186 SLLTHMFAQQAGLEVGDFIWTGGDCHIYSNHTEQVTEQLSREPYPFPRLELA-KAPSMFE 244 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + ++D ++ Y+ H I A V+V Sbjct: 245 YSFDDISVMDYQHHPTIKAPVAV 267 >gi|213964887|ref|ZP_03393086.1| thymidylate synthase [Corynebacterium amycolatum SK46] gi|213952423|gb|EEB63806.1| thymidylate synthase [Corynebacterium amycolatum SK46] Length = 278 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 160/261 (61%), Positives = 200/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GTRS FG Q+RFDLS+GFPL+TTKKVH KS+V+ELLWFL Sbjct: 19 YEDLLREILADGAAKSDRTGTGTRSVFGRQLRFDLSEGFPLITTKKVHLKSIVYELLWFL 78 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV+IWDEWAD DG+LGP+YGVQWRSWP DG+ IDQI+ +++L+++P Sbjct: 79 RGDSNVRWLQDRGVTIWDEWADDDGDLGPVYGVQWRSWPTPDGHHIDQIAQALETLKSNP 138 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 139 DSRRNIVSAWNVSEISNMALPPCHLLFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 198 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G GEFI T GD H+Y+NH EQ +LQ+SR PR P + + + + Sbjct: 199 LTHMMAQQAGLDVGEFIWTGGDCHIYDNHIEQCELQVSREPRPYPTLKL-RKADSIFDYA 257 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + Y+PH I +V+V Sbjct: 258 YEDIEVIGYDPHPLIRGQVAV 278 >gi|296171672|ref|ZP_06852886.1| thymidylate synthase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894033|gb|EFG73796.1| thymidylate synthase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 270 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 160/261 (61%), Positives = 200/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG+Q+R+DLS GFPLLTTKKVH KSVV+ELLWFL Sbjct: 11 YEDLLRLVLERGTAKSDRTGTGTRSLFGHQLRYDLSAGFPLLTTKKVHLKSVVYELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV++LH HGV+IWDEWA + G+LGPIYGVQWRSWP G +DQIS+ ++ LR DP Sbjct: 71 RGDSNVAWLHEHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHVDQISAALELLRTDP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +M LPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 131 NSRRIIVSAWNVGEIPQMVLPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ QL R PR P++++ + + Sbjct: 191 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRTQLGREPRPYPELVLAQR-DSIFDYT 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y+D +++Y+PH AI A V+V Sbjct: 250 YDDVVIKNYDPHPAIKAPVAV 270 >gi|145224587|ref|YP_001135265.1| thymidylate synthase [Mycobacterium gilvum PYR-GCK] gi|189036939|sp|A4TCI9|TYSY_MYCGI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145217073|gb|ABP46477.1| thymidylate synthase [Mycobacterium gilvum PYR-GCK] Length = 266 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 160/261 (61%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 7 YEDLLRLVLDTGTPKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV+IWDEWA G+LGP+YGVQWRSWP G IDQIS+ + L+ DP Sbjct: 67 RGDSNVRWLQERGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGEHIDQISAALDLLKRDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ QLSR PR P++++ P + + Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAPR-DSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++YEPH AI A V++ Sbjct: 246 YEDVVIKNYEPHPAIKAPVAI 266 >gi|319442559|ref|ZP_07991715.1| thymidylate synthase [Corynebacterium variabile DSM 44702] Length = 270 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 156/261 (59%), Positives = 200/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL +++ G + DRTG GTRS F QMRFDL++GFPL+TTKKVH S+V ELLWFL Sbjct: 11 YEDLLAEILEHGVHKDDRTGTGTRSLFARQMRFDLAEGFPLITTKKVHLHSIVGELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSN+++LH + VSIWDEWAD+DGELGP+YGVQWRSWP DG IDQI++ +++L+ +P Sbjct: 71 RGDSNIAWLHENKVSIWDEWADEDGELGPVYGVQWRSWPTPDGRHIDQITAALETLKNNP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY++ Sbjct: 131 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAI 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEF+ T GD H+Y+NH +Q LQLSR R P + ++ DL S+R Sbjct: 191 LTHMFAQQAGLEVGEFVWTGGDCHIYDNHVDQVALQLSREARPYPTLNLH-KAADLFSYR 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y+PH I A V+V Sbjct: 250 FDDIEVIGYDPHPGIKAPVAV 270 >gi|293189215|ref|ZP_06607938.1| thymidylate synthase [Actinomyces odontolyticus F0309] gi|292821678|gb|EFF80614.1| thymidylate synthase [Actinomyces odontolyticus F0309] Length = 267 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 148/263 (56%), Positives = 190/263 (72%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY DLL +++ G+ + DRTG GTRS FG Q+R+DLSKGFPL+TTK+VH KSVV ELLW Sbjct: 6 RQYEDLLARIMREGTPKGDRTGTGTRSLFGAQLRYDLSKGFPLITTKRVHLKSVVGELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL G SNVS+L +G+ IW+EWAD+DGELGP+YGVQWRSW DG IDQIS ++++L+ Sbjct: 66 FLSGSSNVSWLQDNGIRIWNEWADEDGELGPVYGVQWRSWNAGDGRHIDQISQVLETLKT 125 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR +VSAWNV + +MAL PCH FQ YV +G+LS QLYQRS D+FLG+PFNIASY Sbjct: 126 NPDSRRMVVSAWNVGDLPQMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASY 185 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 SLLT M A G + G+FI T GD H+Y+NH EQ QLSR P P++ + + Sbjct: 186 SLLTHMFAQQAGLEVGDFIWTGGDCHIYSNHTEQVTEQLSREPYPFPRLELA-KAPSMFE 244 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + ++D ++ Y H I A V+V Sbjct: 245 YSFDDISVTDYRHHPTIKAPVAV 267 >gi|148823952|ref|YP_001288706.1| thymidylate synthase [Mycobacterium tuberculosis F11] gi|254551823|ref|ZP_05142270.1| thymidylate synthase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289553451|ref|ZP_06442661.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 605] gi|289762936|ref|ZP_06522314.1| thymidylate synthase thyA [Mycobacterium tuberculosis GM 1503] gi|297635373|ref|ZP_06953153.1| thymidylate synthase [Mycobacterium tuberculosis KZN 4207] gi|148722479|gb|ABR07104.1| thymidylate synthase thyA [Mycobacterium tuberculosis F11] gi|289438083|gb|EFD20576.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 605] gi|289710442|gb|EFD74458.1| thymidylate synthase thyA [Mycobacterium tuberculosis GM 1503] gi|328457927|gb|AEB03350.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 4207] Length = 263 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 166/264 (62%), Positives = 201/264 (76%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELL Sbjct: 1 MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGDSN+ +LH HGV+IWDEWA GELGPIYGVQWRSWP G IDQIS+ + LR Sbjct: 61 WFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV I++MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 TDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A+ G GEFI GD H+Y+NH EQ LQLSR PR P++++ + + Sbjct: 181 YALLTHMMAAQAGLSVGEFIWAGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIF 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + YED +++Y+PH AI A V+V Sbjct: 240 EYTYEDIVVKNYDPHPAIKAPVAV 263 >gi|29654838|ref|NP_820530.1| thymidylate synthase [Coxiella burnetii RSA 493] gi|161831612|ref|YP_001597383.1| thymidylate synthase [Coxiella burnetii RSA 331] gi|165919218|ref|ZP_02219304.1| thymidylate synthase [Coxiella burnetii RSA 334] gi|62901362|sp|Q83BG2|TYSY_COXBU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036931|sp|A9KF61|TYSY_COXBN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036932|sp|A9N980|TYSY_COXBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|29542106|gb|AAO91044.1| thymidylate synthase [Coxiella burnetii RSA 493] gi|161763479|gb|ABX79121.1| thymidylate synthase [Coxiella burnetii RSA 331] gi|165917079|gb|EDR35683.1| thymidylate synthase [Coxiella burnetii RSA 334] Length = 264 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 149/264 (56%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+ ++ G + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL Sbjct: 1 MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W DG +DQ+ +++ ++ Sbjct: 61 WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A + GEFI + GD H+YN H +Q QLSR PR LPQ+IIN + L Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + + DF++ +Y PH AI A V+V Sbjct: 241 DYNFNDFSIVNYHPHPAIKAPVAV 264 >gi|15842302|ref|NP_337339.1| thymidylate synthase [Mycobacterium tuberculosis CDC1551] gi|215404733|ref|ZP_03416914.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987] gi|215412578|ref|ZP_03421306.1| thymidylate synthase [Mycobacterium tuberculosis 94_M4241A] gi|215431705|ref|ZP_03429624.1| thymidylate synthase [Mycobacterium tuberculosis EAS054] gi|215447016|ref|ZP_03433768.1| thymidylate synthase [Mycobacterium tuberculosis T85] gi|260187781|ref|ZP_05765255.1| thymidylate synthase [Mycobacterium tuberculosis CPHL_A] gi|260201893|ref|ZP_05769384.1| thymidylate synthase [Mycobacterium tuberculosis T46] gi|260206075|ref|ZP_05773566.1| thymidylate synthase [Mycobacterium tuberculosis K85] gi|294994142|ref|ZP_06799833.1| thymidylate synthase [Mycobacterium tuberculosis 210] gi|306777045|ref|ZP_07415382.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu001] gi|306780947|ref|ZP_07419284.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu002] gi|306785575|ref|ZP_07423897.1| thymidylate synthase [Mycobacterium tuberculosis SUMu003] gi|306790170|ref|ZP_07428492.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu004] gi|306798672|ref|ZP_07436974.1| thymidylate synthase [Mycobacterium tuberculosis SUMu006] gi|306807432|ref|ZP_07444100.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu007] gi|306968827|ref|ZP_07481488.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu009] gi|306973160|ref|ZP_07485821.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu010] gi|307080869|ref|ZP_07490039.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu011] gi|13882597|gb|AAK47153.1| thymidylate synthase [Mycobacterium tuberculosis CDC1551] gi|308214556|gb|EFO73955.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu001] gi|308326203|gb|EFP15054.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu002] gi|308329758|gb|EFP18609.1| thymidylate synthase [Mycobacterium tuberculosis SUMu003] gi|308333365|gb|EFP22216.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu004] gi|308341052|gb|EFP29903.1| thymidylate synthase [Mycobacterium tuberculosis SUMu006] gi|308346162|gb|EFP35013.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu007] gi|308353578|gb|EFP42429.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu009] gi|308357422|gb|EFP46273.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu010] gi|308361374|gb|EFP50225.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu011] gi|323718611|gb|EGB27775.1| thymidylate synthase thyA [Mycobacterium tuberculosis CDC1551A] Length = 266 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 166/261 (63%), Positives = 201/261 (77%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELLWFL Sbjct: 7 YEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSN+ +LH HGV+IWDEWA GELGPIYGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I++MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ LQLSR PR P++++ + + + Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIFEYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++Y+PH AI A V+V Sbjct: 246 YEDIVVKNYDPHPAIKAPVAV 266 >gi|183981970|ref|YP_001850261.1| thymidylate synthase ThyA [Mycobacterium marinum M] gi|183175296|gb|ACC40406.1| thymidylate synthase ThyA [Mycobacterium marinum M] Length = 266 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG Q+R+DL GFPLLTTKKVH+KSVV+ELLWFL Sbjct: 7 YEDLLRRVLETGTAKSDRTGTGTRSLFGQQIRYDLGCGFPLLTTKKVHFKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +HGV+IWDEWA + G+LGPIYGVQWRSWP G IDQIS+ ++ LR DP Sbjct: 67 RGDSNVGWLQQHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISAALELLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGQIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y NH EQ QL R PR P++ ++ + + Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYGNHVEQVTEQLRREPRPYPKLSLSQR-DSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED ++ Y+PH AI A V+V Sbjct: 246 YEDVVVQDYDPHPAIKAPVAV 266 >gi|329889820|ref|ZP_08268163.1| thymidylate synthase [Brevundimonas diminuta ATCC 11568] gi|328845121|gb|EGF94685.1| thymidylate synthase [Brevundimonas diminuta ATCC 11568] Length = 285 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 164/262 (62%), Positives = 198/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+LLR ++ G R DRTG GT FG QMRFDLSKGFPLLTTKK+H +S+ ELLWF Sbjct: 25 QYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPLLTTKKLHTRSIFIELLWF 84 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG++N+++L +GVSIWDEWAD DG+LGP+YG QWRSW +G IDQI +V L+ + Sbjct: 85 LRGETNIAWLKDNGVSIWDEWADADGDLGPVYGKQWRSWAAPNGASIDQIQKLVHGLKTN 144 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRRHIVSAWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 145 PNSRRHIVSAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 204 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT MLA V+G + G+F+HT GD HLY NH EQA+LQLSR+P LP + + + DL F Sbjct: 205 LLTYMLAKVVGLEPGDFVHTFGDAHLYLNHLEQAELQLSRAPLPLPTLSVA-DKDDLFGF 263 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 DF L Y+ I A V+V Sbjct: 264 ELSDFVLNDYQSWPHIKAPVAV 285 >gi|148705312|gb|EDL37259.1| thymidylate synthase, isoform CRA_a [Mus musculus] Length = 318 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 37 QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 96 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 97 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 156 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 157 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 216 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 217 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 276 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 277 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 318 >gi|271966278|ref|YP_003340474.1| Thymidylate synthase [Streptosporangium roseum DSM 43021] gi|270509453|gb|ACZ87731.1| Thymidylate synthase [Streptosporangium roseum DSM 43021] Length = 265 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 161/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLR V+ G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH +S+V+ELLWF Sbjct: 5 QYEDLLRLVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLRSIVYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSN+ +LH+HGV+IWDEWAD +GELGP+YG QWRSWP DG IDQ+S ++ +LR D Sbjct: 65 LRGDSNIGWLHKHGVTIWDEWADANGELGPVYGAQWRSWPAPDGRHIDQVSEVLDTLRRD 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA +DKMAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRMIVSAWNVAELDKMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G + G+FI T GD H+Y+NH EQ QLSR+P P + + L + Sbjct: 185 LLTHMVAQQAGLKPGDFIWTGGDCHIYDNHVEQVTEQLSRTPFEFPGLRL-RQADSLFDY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 Y D + Y H AI A V+V Sbjct: 244 AYADVEVLDYRHHPAIKAPVAV 265 >gi|84496920|ref|ZP_00995774.1| thymidylate synthase [Janibacter sp. HTCC2649] gi|84383688|gb|EAP99569.1| thymidylate synthase [Janibacter sp. HTCC2649] Length = 263 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 168/264 (63%), Positives = 205/264 (77%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL ++ G D+ DRTG GTRS FG+QMRFDLS GFP++TTKKVH KS++ ELL Sbjct: 1 MRQYHDLLNRILDEGVDKSDRTGTGTRSVFGHQMRFDLSDGFPVVTTKKVHLKSIIGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L G+SIWDEWAD++G+LGP+YG QWRSWP DG +DQI+ +++ +R Sbjct: 61 WFLRGDTNVRWLQERGISIWDEWADENGDLGPVYGHQWRSWPTPDGRQVDQIAKVIEGIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRRHIVSAWNVA +D MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHALFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A + + GEF+HTLGD HLY+NH EQA LQL+R PR LP M I P + Sbjct: 181 YALLTMMVAQLTDLEPGEFVHTLGDAHLYSNHLEQARLQLTREPRDLPTMRIAPK-TAID 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F +DF L Y+PH I A ++V Sbjct: 240 DFDLDDFELVGYDPHPGIKAPIAV 263 >gi|227546560|ref|ZP_03976609.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212877|gb|EEI80756.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 290 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 151/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP IDQIS+++ + Sbjct: 87 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QL R P P + I L Sbjct: 207 SYSLLTMMMAQQTGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEI-RKADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290 >gi|297153967|gb|ADI03679.1| thymidylate synthase [Streptomyces bingchenggensis BCW-1] Length = 265 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 160/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLR V+ G+ + DRTG GTRS FG+Q+R+DL++GFPL+TTKKVH +S+V+ELLWF Sbjct: 5 QYEDLLRLVLTSGTAKADRTGTGTRSVFGHQLRYDLAQGFPLITTKKVHLRSIVYELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L HG++IWDEWAD +GELGP+YGVQWRSWP DG IDQIS ++ +LR D Sbjct: 65 LRGDSNVGWLREHGITIWDEWADANGELGPVYGVQWRSWPAPDGRHIDQISQVLDTLRRD 124 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNVA + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+ Sbjct: 125 PDSRRMIVSAWNVAELPKMALAPCHALFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G + G+F+ T GD H+Y+NH +Q QLSR+P P + + L ++ Sbjct: 185 LLTHMVAQQAGLEPGDFVWTGGDCHIYDNHIKQVTEQLSRTPFEFPGLRL-RQADSLFAY 243 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 Y D L Y H AI A V+V Sbjct: 244 AYADVELLDYRHHPAIKAPVAV 265 >gi|296222340|ref|XP_002757144.1| PREDICTED: thymidylate synthase-like isoform 1 [Callithrix jacchus] Length = 313 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYRDMDS 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNGELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFKVEGYNPHPTIKMEMAV 313 >gi|262375002|ref|ZP_06068236.1| thymidylate synthase [Acinetobacter lwoffii SH145] gi|262310015|gb|EEY91144.1| thymidylate synthase [Acinetobacter lwoffii SH145] Length = 280 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 161/280 (57%), Positives = 200/280 (71%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+H++ G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL Sbjct: 1 MRQYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + VSIWDEWA +GELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGASKNADNSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V NGKLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVHNGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V + G+F+ T GD HLY+NHFEQA LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLEVGDFVWTGGDTHLYSNHFEQAQLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I DL F++ED + YE H I A V+V Sbjct: 241 LGLCQLKLNPEIKDLFDFKFEDIEIVGYESHPGIKAPVAV 280 >gi|219883095|ref|YP_002477705.1| thymidylate synthase [Arthrobacter chlorophenolicus A6] gi|219862101|gb|ACL42442.1| thymidylate synthase [Arthrobacter chlorophenolicus A6] Length = 276 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 156/269 (57%), Positives = 192/269 (71%), Gaps = 8/269 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL V G+ + DRTG GT S FG Q+RFDLS+GFPL+ TKKVHW SV +ELLWFL Sbjct: 8 YEDLLAEVAALGAAKGDRTGTGTTSVFGRQIRFDLSEGFPLIWTKKVHWPSVANELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV +L GV IWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+S+R +P Sbjct: 68 RGETNVRWLQERGVKIWDEWADENGDLGPVYGSQWRSWPTPDGGQIDQIANVVESIRNNP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------NGKLSCQLYQRSGDVFLGIPFN 177 SRRHIV+AWN A +D MALPPCH LFQFYV GKLSCQLYQRS D+FLG+PFN Sbjct: 128 NSRRHIVTAWNPAEVDNMALPPCHALFQFYVAPGTDGGPGKLSCQLYQRSADMFLGVPFN 187 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPN 235 IASY+LLT M+A G GEFI T GDVH+Y+NH +Q QL R R P++ N Sbjct: 188 IASYALLTHMVAQQTGLDVGEFIWTGGDVHIYDNHTDQVAEQLGRLDEVRAYPELKFNRV 247 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + +EDF + Y+PH I A V+V Sbjct: 248 PDSIFDYTFEDFEVVGYDPHPLIKAPVAV 276 >gi|326384524|ref|ZP_08206204.1| thymidylate synthase [Gordonia neofelifaecis NRRL B-59395] gi|326196869|gb|EGD54063.1| thymidylate synthase [Gordonia neofelifaecis NRRL B-59395] Length = 268 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 152/261 (58%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG+QMRFDLS+GFP++TTKKVH KS+++ELLWFL Sbjct: 9 YEDLLRLVLETGTPKADRTGTGTRSVFGHQMRFDLSEGFPVITTKKVHLKSIIYELLWFL 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV+IWDEWA +GELGP+YGVQWR+WP G +DQI+ +++LR+DP Sbjct: 69 RGDSNVRWLQDRGVTIWDEWASPEGELGPVYGVQWRNWPTPSGEHVDQIAVALETLRSDP 128 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 129 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVAGGKLSCQLYQRSADLFLGVPFNIASYAL 188 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G + G+F+ T GD H+Y+NH EQ QLSR P + + + + Sbjct: 189 LTHMMAQQAGLEVGDFVWTGGDCHIYDNHVEQVREQLSRDALPYPTLRL-RKADSIFDYD 247 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y H AI A V+V Sbjct: 248 FDDVEVVDYHSHPAIKAPVAV 268 >gi|218754505|ref|ZP_03533301.1| thymidylate synthase [Mycobacterium tuberculosis GM 1503] gi|253798154|ref|YP_003031155.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 1435] gi|297732371|ref|ZP_06961489.1| thymidylate synthase [Mycobacterium tuberculosis KZN R506] gi|313659703|ref|ZP_07816583.1| thymidylate synthase [Mycobacterium tuberculosis KZN V2475] gi|253319657|gb|ACT24260.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 1435] Length = 266 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 165/261 (63%), Positives = 200/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELLWFL Sbjct: 7 YEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSN+ +LH HGV+IWDEWA GELGPIYGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I++MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI GD H+Y+NH EQ LQLSR PR P++++ + + + Sbjct: 187 LTHMMAAQAGLSVGEFIWAGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIFEYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++Y+PH AI A V+V Sbjct: 246 YEDIVVKNYDPHPAIKAPVAV 266 >gi|332879843|ref|ZP_08447532.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682220|gb|EGJ55128.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 274 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 166/277 (59%), Positives = 207/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLLRH++ G + DRTG GT S FGYQMRFDL++GFPL+TTKK+H KSV++ELL Sbjct: 1 MKIYQDLLRHILANGYSKDDRTGTGTTSVFGYQMRFDLNEGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ HGV IW+EWAD +G+LGP+YG QWR+W +G IDQ+ ++V +L+ Sbjct: 61 WFLKGDTNIGYLNEHGVRIWNEWADPNGDLGPVYGAQWRNW---NGEAIDQLKAVVDTLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH LFQFYV +GKLSCQLYQRS Sbjct: 118 HNPESRRIIVSAWNPSVLPDTRKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+LLTMMLA V Q G+F+HT GDVH+YNNH EQ LQLSR+PR L Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +F Y DF L Y+P+ I A V+V Sbjct: 238 PTMHLNPAVKDLFAFNYTDFRLEGYDPYPTIKAAVAV 274 >gi|227487755|ref|ZP_03918071.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542399|ref|ZP_03972448.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092257|gb|EEI27569.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181597|gb|EEI62569.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51866] Length = 266 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 160/261 (61%), Positives = 196/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ G+ + DRTG GT S FG QMRF L++ FPL+TTKKVHWKSVV ELLWFL Sbjct: 7 YEDLLREILEEGAHKDDRTGTGTTSLFGKQMRFHLAEAFPLITTKKVHWKSVVGELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV++LH +GVSIWDEWAD++GELGPIYGVQWRSWP +G IDQI+ ++ L+ DP Sbjct: 67 RGDSNVAWLHENGVSIWDEWADENGELGPIYGVQWRSWPTPNGQHIDQIAGALELLKKDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 127 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVADGKLSCQLYQRSCDMFLGVPFNIASYSL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G G+F+ T GD H+Y+NH EQ QLSR PR P++ + + + Sbjct: 187 LTHMFAQQAGLDVGDFVWTGGDCHIYDNHREQVREQLSREPRPYPRLDLTRAP-SMFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +E L Y+PH I A V+V Sbjct: 246 FEHINLVGYDPHPTIKAPVAV 266 >gi|311064820|ref|YP_003971546.1| thymidylate synthase [Bifidobacterium bifidum PRL2010] gi|310867140|gb|ADP36509.1| ThyA Thymidylate synthase [Bifidobacterium bifidum PRL2010] Length = 290 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 149/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119 +G SNV +L H V IWD+WAD++G+LGP+YGVQWRSWP IDQI +++ + Sbjct: 87 KGSSNVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIGNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIA Sbjct: 147 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QLSR P P++ I L Sbjct: 207 SYSLLTMMIAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEI-RKADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDFT+ Y H I A V+V Sbjct: 266 FDYQYEDFTIVDYRHHPTIKAPVAV 290 >gi|238898972|ref|YP_002924654.1| thymidylate synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259550788|sp|C4K7G3|TYSY_HAMD5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|229466732|gb|ACQ68506.1| thymidylate synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 264 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++ V+ G+++ DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL Sbjct: 1 MKQYLHLMKKVLNEGTEKEDRTGTGTVSIFGHQMRFNLKEGFPLVTTKKCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + VSIW+EWADK G LGPIYG QWR+W DG+ +DQ+S ++ L+ Sbjct: 61 WFLKGDTNIAYLRENQVSIWEEWADKTGSLGPIYGKQWRAWGTPDGHQVDQLSQTLELLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +DKMAL PCH FQFYV LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPDSRRMIVSAWNVGELDKMALAPCHAFFQFYVVKKTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLL M+A F G+F+ T GD+HLY+NH +QA LQL+R PR+LP ++IN L Sbjct: 181 YSLLMHMIAQQCDFFLGDFVWTGGDIHLYSNHLDQAHLQLTREPRSLPHLLINRKPDSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF+L Y P+ AI A V++ Sbjct: 241 DYHFEDFSLEKYNPYPAIKAPVAI 264 >gi|298253462|ref|ZP_06977254.1| thymidylate synthase [Gardnerella vaginalis 5-1] gi|297532857|gb|EFH71743.1| thymidylate synthase [Gardnerella vaginalis 5-1] Length = 290 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 148/265 (55%), Positives = 188/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----NVIDQISSIVQSL 119 +G SNV +L +GV IWDEWAD++G+LGP+YGVQWRSWP IDQI++++ + Sbjct: 87 KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P PQ+ I + Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEI-RKADSI 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y+ H I A V+V Sbjct: 266 FDYDYSDFKVVEYKHHPTIKAPVAV 290 >gi|169630173|ref|YP_001703822.1| thymidylate synthase (ThyA) [Mycobacterium abscessus ATCC 19977] gi|169242140|emb|CAM63168.1| Thymidylate synthase (ThyA) [Mycobacterium abscessus] Length = 266 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 156/261 (59%), Positives = 196/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG+Q+R+ L GFPL+TTKKVH KSV++ELLWFL Sbjct: 7 YEDLLRLVLEEGTPKADRTGTGTRSVFGHQLRYRLEDGFPLITTKKVHLKSVIYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L GV+IWDEWA + GELGP+YGVQWR+WP G IDQIS+ + LR +P Sbjct: 67 RGESNVRWLQERGVTIWDEWASEAGELGPVYGVQWRAWPTPSGEHIDQISAALDLLRTNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G G+F+ T GD H+Y+NH EQ QLSR P P +++ + +R Sbjct: 187 LTHMMAAQAGLGVGDFVWTGGDCHIYDNHVEQVTEQLSRDPYPYPTLVLAQR-DSIFDYR 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED T+ +Y+ HAAI A V+V Sbjct: 246 YEDITVENYQHHAAIKAPVAV 266 >gi|189218127|ref|YP_001938769.1| thymidylate synthase [Methylacidiphilum infernorum V4] gi|189184985|gb|ACD82170.1| Thymidylate synthase [Methylacidiphilum infernorum V4] Length = 275 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 153/264 (57%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL V+ FG ++DRTG+GT S FG Q++FDL+ GFPLLTTKK++WK++V+ELL Sbjct: 12 MQLYLQLLEKVLNFGIPKKDRTGIGTYSLFGEQLKFDLTLGFPLLTTKKLYWKAIVYELL 71 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH++GV+IWDEWAD++G LG IYG QWRSW +G +DQI+ ++ ++ Sbjct: 72 WFLKGDTNVAYLHQNGVTIWDEWADENGNLGRIYGAQWRSWRGANGRTVDQIAWVIDQIK 131 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWN A +++MALPPCH LFQFYV LSC+LYQRS D+FLG+PFNIAS Sbjct: 132 KDPDSRRLIVSAWNPAELEEMALPPCHVLFQFYVHYPYLSCKLYQRSADIFLGVPFNIAS 191 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A V G EFIH+ GD+HLY +H QA LQL R+P+ LP + INP + + Sbjct: 192 YSLLTHLVAQVTGLIPKEFIHSFGDIHLYASHLSQARLQLERTPKALPSLFINPKVKSID 251 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +ED L+ Y+PH I A V+V Sbjct: 252 DISFEDIELKGYDPHPPIKAAVAV 275 >gi|154486823|ref|ZP_02028230.1| hypothetical protein BIFADO_00651 [Bifidobacterium adolescentis L2-32] gi|154084686|gb|EDN83731.1| hypothetical protein BIFADO_00651 [Bifidobacterium adolescentis L2-32] Length = 266 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 146/265 (55%), Positives = 188/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRF+L + FPLLTTK V +K + +ELLWFL Sbjct: 3 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFNLKESFPLLTTKTVFFKGLAYELLWFL 62 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L H V IWDEWAD++G+LGP+YG QWRSWP D IDQIS+++ + Sbjct: 63 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 123 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G + GEF+ T GD H+Y+NH +Q QLSR+P PQ+ I L Sbjct: 183 SYSLLTLMMAQQTGLEPGEFVWTGGDCHVYDNHIDQVLEQLSRTPYPYPQIRI-RKADSL 241 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + +Y+ H I A V+V Sbjct: 242 FDYDYSDFEIVNYQHHPTIKAPVAV 266 >gi|322689847|ref|YP_004209581.1| thymidylate synthase [Bifidobacterium longum subsp. infantis 157F] gi|320461183|dbj|BAJ71803.1| thymidylate synthase [Bifidobacterium longum subsp. infantis 157F] Length = 290 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 151/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP IDQIS+++ + Sbjct: 87 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QL R P P + I L Sbjct: 207 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEI-RKADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290 >gi|283782899|ref|YP_003373653.1| thymidylate synthase [Gardnerella vaginalis 409-05] gi|283441780|gb|ADB14246.1| thymidylate synthase [Gardnerella vaginalis 409-05] Length = 290 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 148/265 (55%), Positives = 189/265 (71%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R+++ G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL Sbjct: 27 YEDLVRNILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----NVIDQISSIVQSL 119 +G SNV +L +GV IWDEWAD++G+LGP+YGVQWRSWP IDQI++++ + Sbjct: 87 KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P PQ+ I + Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEI-RKADSI 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y+ H I A V+V Sbjct: 266 FDYDYSDFKVVEYKHHPTIKAPVAV 290 >gi|89889399|ref|ZP_01200910.1| thymidylate synthase [Flavobacteria bacterium BBFL7] gi|89517672|gb|EAS20328.1| thymidylate synthase [Flavobacteria bacterium BBFL7] Length = 274 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 164/277 (59%), Positives = 210/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+H++ G+D+ DRTG GTRS FGYQMRF+L +GFP++TTKK+H KS++HELL Sbjct: 1 MKQYHDLLQHILDHGTDKGDRTGTGTRSIFGYQMRFNLEEGFPMVTTKKLHLKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW+EWA+ +G+LGP+YG QWR+W + D IDQI IV++L+ Sbjct: 61 WFLTGDTNVKYLQDNGVRIWNEWANDNGDLGPVYGHQWRNWNNED---IDQIKDIVKTLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV + KLSCQLYQRS Sbjct: 118 DNPNSRRMMVSAWNPSVMPDTSISFSENVANGKAALPPCHAFFQFYVSDNKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+L TMM+A V GF+YG+FIHT GDVH+Y+NH EQ LQLSR R L Sbjct: 178 ADVFLGVPFNIASYALFTMMMAQVCGFEYGDFIHTFGDVHIYSNHMEQVALQLSRETRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M INP++ D+ +F++EDFTL +Y PH AI V++ Sbjct: 238 PTMKINPDVKDIFNFKFEDFTLDNYNPHPAIKGAVAI 274 >gi|78484917|ref|YP_390842.1| thymidylate synthase [Thiomicrospira crunogena XCL-2] gi|123769134|sp|Q31I55|TYSY_THICR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|78363203|gb|ABB41168.1| thymidylate synthase [Thiomicrospira crunogena XCL-2] Length = 277 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 154/277 (55%), Positives = 193/277 (69%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+H+ + G + DRTG GTRS FGYQMRF+L +GFPL+TTKK+H KS+V+ELL Sbjct: 1 MKQYLDLLKHITETGVAKGDRTGTGTRSVFGYQMRFNLEEGFPLVTTKKLHLKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N YL HGV IWDEWA + G+LGPIYG QW +W +G+ I+QI ++Q+L+ Sbjct: 61 WFLNGDTNNQYLKEHGVRIWDEWATETGDLGPIYGRQWVAWEKPNGDTINQIEEVIQTLK 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN A + MAL CH FQFYV NGKLSCQLYQRS Sbjct: 121 KNPNSRRMLVSAWNPADLPDESMSPQENVKQGRMALATCHAFFQFYVANGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASY+LLT M+A + GEF+ T GDVHLYNN EQA+LQ+SR+P L Sbjct: 181 ADTFLGVPFNIASYALLTHMIAQQTDLEVGEFVWTGGDVHLYNNTLEQAELQMSRTPYAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I + + ++DF + YE H I A VSV Sbjct: 241 PKLKIKRKPPSIFDYEFDDFEIEGYESHPHIKAVVSV 277 >gi|118086858|ref|XP_419147.2| PREDICTED: similar to Chain A, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation [Gallus gallus] Length = 298 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 137/282 (48%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL +RH+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 17 QYLQQVRHILQHGHRKEDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 76 Query: 63 LRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD ++G+LGP+YG QWR + Sbjct: 77 IKGSTNAKELSAKGVKIWDANGSREFLDKQGFCTREEGDLGPVYGFQWRHFGADYKDMHT 136 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY +DQ+ +++ ++ +P RR I+ AWN I MALPPCH L QFYV NG+LSCQ Sbjct: 137 DYSNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQ 196 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E +QL R Sbjct: 197 LYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQR 256 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR LP++ I + D+ F+ EDF + Y PH I +++V Sbjct: 257 EPRPLPKLRILRKVEDISDFKAEDFQIEDYNPHPPIKMEMAV 298 >gi|18044897|gb|AAH20139.1| Tyms protein [Mus musculus] Length = 307 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 26 QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 86 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 266 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307 >gi|46358062|ref|NP_067263.1| thymidylate synthase [Mus musculus] gi|136614|sp|P07607|TYSY_MOUSE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|285803264|pdb|3IHH|A Chain A, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803265|pdb|3IHH|B Chain B, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803266|pdb|3IHH|C Chain C, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803267|pdb|3IHH|D Chain D, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803268|pdb|3IHH|E Chain E, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803269|pdb|3IHH|F Chain F, Crystal Structure Of Mouse Thymidylate Synthase In Complex With Dump gi|285803270|pdb|3IHI|A Chain A, Crystal Structure Of Mouse Thymidylate Synthase gi|285803271|pdb|3IHI|B Chain B, Crystal Structure Of Mouse Thymidylate Synthase gi|202030|gb|AAA40439.1| thymidylate synthase (EC 2.1.1.45) [Mus musculus] gi|202050|gb|AAA40444.1| thymidylate synthase [Mus musculus] gi|26330828|dbj|BAC29144.1| unnamed protein product [Mus musculus] gi|148705313|gb|EDL37260.1| thymidylate synthase, isoform CRA_b [Mus musculus] Length = 307 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 26 QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 86 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 266 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307 >gi|315498745|ref|YP_004087549.1| thymidylate synthase [Asticcacaulis excentricus CB 48] gi|315416757|gb|ADU13398.1| thymidylate synthase [Asticcacaulis excentricus CB 48] Length = 268 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 159/263 (60%), Positives = 205/263 (77%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLDL+R ++ G R DRTG GT+ FG Q+RFDL++GFPLLTTKKVH+KSV ELLW Sbjct: 7 YQYLDLVRDIMANGVTRMDRTGTGTKGVFGRQIRFDLAEGFPLLTTKKVHFKSVAVELLW 66 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGD+N+ YL HGVSIWDEWAD++G+LGP+YG QWRSW DG VIDQ+S ++++L+ Sbjct: 67 FLRGDTNIKYLKDHGVSIWDEWADENGDLGPVYGKQWRSWAAPDGRVIDQMSQLIENLKT 126 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P+SRRH++SAWN + ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY Sbjct: 127 NPHSRRHVISAWNPSEVEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASY 186 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A +G + G+F+H+ GDVHLY NH EQA QLSR P + P + + +L + Sbjct: 187 ALLTHMVAQAVGLEVGDFVHSFGDVHLYLNHVEQAQTQLSRDPMSFPTLKLAAK-TNLFA 245 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 F Y D L Y+ H A+ A V+V Sbjct: 246 FDYADIELIGYQSHGALKAPVAV 268 >gi|315606206|ref|ZP_07881233.1| thymidylate synthase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312094|gb|EFU60184.1| thymidylate synthase [Actinomyces sp. oral taxon 180 str. F0310] Length = 267 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 149/263 (56%), Positives = 189/263 (71%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY DLL ++ G+ + DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KSVV ELLW Sbjct: 6 RQYEDLLARIMSEGTPKGDRTGTGTRSVFGAQLRYDLSRGFPLITTKRVHVKSVVGELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL G SNVS+L HG+ IW+EWAD +G+LGP+YGVQWRSW DG IDQISS++++LR Sbjct: 66 FLSGSSNVSWLQEHGIRIWNEWADGNGDLGPVYGVQWRSWNAGDGRRIDQISSVLETLRT 125 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV + +MAL PCH FQ YV +G+LS QLYQRS D+FLG+PFNIASY Sbjct: 126 DPDSRRMVVSAWNVGDLKEMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASY 185 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 SLLT M A G + G+F+ T GD H+Y+NH EQ QLSR P P++ + + Sbjct: 186 SLLTHMFAQQAGLEVGDFVWTGGDCHIYSNHTEQVREQLSRDPYPFPRLELI-KARSMFD 244 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + +ED + Y+ H I A V+V Sbjct: 245 YSFEDISFAGYQHHPTIKAPVAV 267 >gi|88802703|ref|ZP_01118230.1| thymidylate synthase [Polaribacter irgensii 23-P] gi|88781561|gb|EAR12739.1| thymidylate synthase [Polaribacter irgensii 23-P] Length = 274 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 154/277 (55%), Positives = 207/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MKQYHDLVKHVLESGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL +GV IW+ WAD++G+LGP+YG QWR+W D IDQ+ ++ +L+ Sbjct: 61 WFIKGDTNIKYLQDNGVKIWNSWADENGDLGPVYGHQWRNWNSDD---IDQLKEVITTLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +V+AWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 TNPNSRRMMVAAWNPSVMPDTAASFSDNVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+YNNH EQ +LQLSR R L Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYNNHIEQLELQLSREIRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +N I D+ +F +EDF L Y PH I KV++ Sbjct: 238 PKMKLNAAIEDIENFTFEDFELLEYNPHPHIKGKVAI 274 >gi|227501444|ref|ZP_03931493.1| thymidylate synthase [Corynebacterium accolens ATCC 49725] gi|227077469|gb|EEI15432.1| thymidylate synthase [Corynebacterium accolens ATCC 49725] Length = 275 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 152/261 (58%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++ VV ELLWFL Sbjct: 16 YEDLLRRVLESGTAKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHGVVGELLWFL 75 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L + V IW+EWAD++G+LGP+YGVQWRSWP DG+ IDQI + +L+ +P Sbjct: 76 RGDSNVKFLQDNNVRIWNEWADENGDLGPVYGVQWRSWPTPDGSHIDQIQQALDTLKNNP 135 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNV+ +D+MAL PCH LFQ YV N LS Q+YQRS D+FLG+PFNIASY+ Sbjct: 136 DSRRNLVSAWNVSELDQMALMPCHLLFQLYVANDTLSLQVYQRSADMFLGVPFNIASYAA 195 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + G+ I T GD H+YNNH EQ QLSR PR PQ+ +N DL S+ Sbjct: 196 LTHMFAQQAGLKVGDLIWTGGDCHIYNNHIEQVQEQLSREPREYPQLKLN-KAKDLFSYD 254 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + DF ++ Y+PH AI A+VSV Sbjct: 255 FADFEVQGYDPHPAIKAQVSV 275 >gi|254821236|ref|ZP_05226237.1| thymidylate synthase [Mycobacterium intracellulare ATCC 13950] Length = 266 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 164/261 (62%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG Q+R+DLS GFPLLTTKKVH KSVV+ELLWFL Sbjct: 7 YEDLLRLVLDEGTAKSDRTGTGTRSLFGRQLRYDLSAGFPLLTTKKVHLKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV++LH HGV+IWDEWA G+LGPIYGVQWRSWP G +DQIS+ + LR DP Sbjct: 67 RGDSNVAWLHEHGVTIWDEWASDAGDLGPIYGVQWRSWPTPTGEHVDQISAALDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 NSRRIIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ LQLSR PR P++++ + + Sbjct: 187 LTHMMAAQSGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELVLG-ERDSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y D +R+Y+PH AI A V+V Sbjct: 246 YGDVVVRNYDPHPAIKAPVAV 266 >gi|121610113|ref|YP_997920.1| thymidylate synthase [Verminephrobacter eiseniae EF01-2] gi|121554753|gb|ABM58902.1| thymidylate synthase [Verminephrobacter eiseniae EF01-2] Length = 298 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 157/268 (58%), Positives = 188/268 (70%), Gaps = 7/268 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+RHV + G + DRTG GT+S FG+QMRFDL GFPL+TTK+VH KS++ ELLWFL Sbjct: 31 YEDLMRHVFRHGVHKSDRTGTGTKSLFGHQMRFDLRGGFPLVTTKRVHLKSIIEELLWFL 90 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 G N +L + GVSIWDEWA DG+LGP+YGVQWRSWP DG IDQI S++ +L+ +P Sbjct: 91 AGSGNNRWLQQRGVSIWDEWARADGDLGPVYGVQWRSWPRPDGGHIDQIGSVIATLKTNP 150 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIPF 176 SRR IVSAWNVA +DKMAL PCH LFQFYV G LSCQLYQRS D+FLG+PF Sbjct: 151 DSRRIIVSAWNVAELDKMALQPCHILFQFYVAPAQTPGGRGTLSCQLYQRSADIFLGLPF 210 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 NIASY+LLT M+A GEFI T GD H+Y+NH Q QL+RSP PQ+ I Sbjct: 211 NIASYALLTHMVAQQCELDVGEFIWTGGDCHIYDNHHAQVQTQLARSPYPYPQLRIRRRP 270 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +RYEDF + Y H AI A V+V Sbjct: 271 DSIFDYRYEDFEVLDYRCHPAIKAPVAV 298 >gi|292493864|ref|YP_003529303.1| thymidylate synthase [Nitrosococcus halophilus Nc4] gi|291582459|gb|ADE16916.1| thymidylate synthase [Nitrosococcus halophilus Nc4] Length = 264 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 158/264 (59%), Positives = 198/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ G +R DRTG GT S FG+QMRFDL +GFPL+TTKK+H +S+ ELL Sbjct: 1 MKPYLDLIQKILDTGVERDDRTGTGTWSIFGHQMRFDLQQGFPLVTTKKLHVRSIFIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP DG +DQIS +++ +R Sbjct: 61 WFLRGDTNVQYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGRHLDQISKVLEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +PYSRRH+V A+N + +D+MALPPCH LFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 HNPYSRRHMVVAYNPSNVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT ++A + GEFI T GDVHLY NH E A LQL+R P P++ + L Sbjct: 181 YALLTHLMAQQCDLEVGEFIWTGGDVHLYRNHLELARLQLTREPLPPPRLRLKRKPPSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++YED + Y+ H I A+VSV Sbjct: 241 EYQYEDLEVVGYQSHPHIKAEVSV 264 >gi|167752654|ref|ZP_02424781.1| hypothetical protein ALIPUT_00910 [Alistipes putredinis DSM 17216] gi|167659723|gb|EDS03853.1| hypothetical protein ALIPUT_00910 [Alistipes putredinis DSM 17216] Length = 299 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 163/298 (54%), Positives = 195/298 (65%), Gaps = 35/298 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR + K G + DRTG GTRS FGYQMRFDL GFPLLTTKKV K V++ELL Sbjct: 1 MQQYLDLLRKIRKDGIVKSDRTGTGTRSIFGYQMRFDLEAGFPLLTTKKVFLKGVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD--------------------------------- 87 WFL+GD+N+ YL HGV IWD A + Sbjct: 61 WFLQGDTNIKYLLDHGVHIWDNDAYRYYNELCVRHGVLPLEREAFLDAVRREEPSSIDGY 120 Query: 88 --GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 G+L +YG QWRSWP DG IDQI ++ ++ P SRR +VSAWNVA +D MALPP Sbjct: 121 RPGDLNHVYGYQWRSWPRPDGGCIDQIRQVIDQIKHSPDSRRMLVSAWNVAEVDDMALPP 180 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 CH LFQFYV G+LSCQLYQRS D FLG+PFNIASY+LLTMM+A G + G+F+HTLGD Sbjct: 181 CHVLFQFYVAGGRLSCQLYQRSADTFLGVPFNIASYALLTMMIAQECGLRPGDFVHTLGD 240 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 HLY NH +Q QLSR+PR LP + +NP + + FRYEDFTL +Y+P AI A +S Sbjct: 241 AHLYLNHADQVAEQLSRTPRPLPTLRLNPAVRSVFDFRYEDFTLENYDPWPAIKAPMS 298 >gi|291457285|ref|ZP_06596675.1| thymidylate synthase [Bifidobacterium breve DSM 20213] gi|291381120|gb|EFE88638.1| thymidylate synthase [Bifidobacterium breve DSM 20213] Length = 290 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 151/265 (56%), Positives = 191/265 (72%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +L+R ++ G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL Sbjct: 27 YENLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSQYFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP IDQIS+++ + Sbjct: 87 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR +VSAWN A ++KMALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNHPDSRRMVVSAWNPAEVEKMALPPCHALFQFYVANGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QLSR P P + I L Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHVYDNHVDQFLEQLSRDPYPYPTIEI-RKADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDFT+ Y+ H I A V+V Sbjct: 266 FDYQYEDFTIVGYQHHPTIKAPVAV 290 >gi|169797290|ref|YP_001715083.1| thymidylate synthase [Acinetobacter baumannii AYE] gi|213155900|ref|YP_002317945.1| thymidylate synthase [Acinetobacter baumannii AB0057] gi|215484727|ref|YP_002326962.1| thymidylate synthase [Acinetobacter baumannii AB307-0294] gi|301346589|ref|ZP_07227330.1| thymidylate synthase [Acinetobacter baumannii AB056] gi|301511036|ref|ZP_07236273.1| thymidylate synthase [Acinetobacter baumannii AB058] gi|301595085|ref|ZP_07240093.1| thymidylate synthase [Acinetobacter baumannii AB059] gi|332851207|ref|ZP_08433280.1| thymidylate synthase [Acinetobacter baumannii 6013150] gi|332866061|ref|ZP_08436789.1| thymidylate synthase [Acinetobacter baumannii 6013113] gi|226713163|sp|B7H0P4|TYSY_ACIB3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|226713164|sp|B7I4U0|TYSY_ACIB5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|169150217|emb|CAM88113.1| thymidylate synthase (TS) (TSase) [Acinetobacter baumannii AYE] gi|213055060|gb|ACJ39962.1| thymidylate synthase [Acinetobacter baumannii AB0057] gi|213986584|gb|ACJ56883.1| thymidylate synthase [Acinetobacter baumannii AB307-0294] gi|332730087|gb|EGJ61414.1| thymidylate synthase [Acinetobacter baumannii 6013150] gi|332734807|gb|EGJ65900.1| thymidylate synthase [Acinetobacter baumannii 6013113] Length = 280 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 156/280 (55%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|213692995|ref|YP_002323581.1| Thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524456|gb|ACJ53203.1| Thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459175|dbj|BAJ69796.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 290 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 150/265 (56%), Positives = 188/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP IDQI +++ + Sbjct: 87 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIFNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QL R P P + I L Sbjct: 207 SYSLLTMMMAQQTGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEI-RKADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290 >gi|227504242|ref|ZP_03934291.1| thymidylate synthase [Corynebacterium striatum ATCC 6940] gi|227199197|gb|EEI79245.1| thymidylate synthase [Corynebacterium striatum ATCC 6940] Length = 265 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 150/266 (56%), Positives = 193/266 (72%), Gaps = 3/266 (1%) Query: 1 MHQ--YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 M Q Y DLLR V++ G+++ DRTG GTRS FG Q+R++L+ FPLLTTKKV++ V+ E Sbjct: 1 MIQTPYEDLLRKVLEEGAEKGDRTGTGTRSIFGAQLRYNLADSFPLLTTKKVYFHGVIGE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 LLWFL+GDSNV +L + V IW+EWAD DGELGP+YGVQWRSWP DG +DQI + + Sbjct: 61 LLWFLKGDSNVKWLQDNNVRIWNEWADADGELGPVYGVQWRSWPTPDGTHVDQIQQALDT 120 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 L+ +P SRR++VSAWNVA +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFN+ Sbjct: 121 LQNNPDSRRNLVSAWNVAELDKMALMPCHLLFQLYVADGKLSLQVYQRSADMFLGVPFNL 180 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 ASY+ L M A G + GE I T GD H+YN+H EQ QLSR PR PQ+ ++ Sbjct: 181 ASYAALAHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSREPRPYPQLKLH-KADS 239 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 L + ++DF + Y+PH I A+VSV Sbjct: 240 LFDYTFDDFEVVGYDPHPTIKAQVSV 265 >gi|294788691|ref|ZP_06753933.1| thymidylate synthase [Simonsiella muelleri ATCC 29453] gi|294483568|gb|EFG31253.1| thymidylate synthase [Simonsiella muelleri ATCC 29453] Length = 264 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 173/264 (65%), Positives = 213/264 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L+++V++ G+D+ DRTG GTRS FGYQMRFDL+ GFPLLTTKK+H +S++HELL Sbjct: 1 MQTYLNLIQYVLEHGTDKSDRTGTGTRSVFGYQMRFDLANGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL + VSIWDEWAD++G+LG +YG QWRSW +G IDQIS I+Q ++ Sbjct: 61 WFLKGETNIKYLKDNNVSIWDEWADENGDLGRVYGAQWRSWQTPNGKSIDQISQIIQQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QNPDSRRLIVSAWNPAEVDNMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V Q GEFIHTLGD H+YNNHFEQA LQL+R PR LP++ IN I DL Sbjct: 181 YALLTMMMAQVCKLQAGEFIHTLGDAHIYNNHFEQAKLQLTREPRRLPEIKINDKIKDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L +Y PH I A+VSV Sbjct: 241 EFKYEDFELINYNPHPHIKAEVSV 264 >gi|306835604|ref|ZP_07468615.1| thymidylate synthase [Corynebacterium accolens ATCC 49726] gi|304568537|gb|EFM44091.1| thymidylate synthase [Corynebacterium accolens ATCC 49726] Length = 275 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 150/261 (57%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV+++ V+ ELLWFL Sbjct: 16 YEDLLRRVLEEGTAKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFRGVIGELLWFL 75 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L + V IW+EWAD++G+LGP+YGVQWRSWP DG+ IDQI + +L+ +P Sbjct: 76 RGDSNVKFLQDNNVHIWNEWADENGDLGPVYGVQWRSWPTPDGSHIDQIQQALDTLKNNP 135 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNV+ +D+MAL PCH LFQ YV N LS Q+YQRS D+FLG+PFNIASY+ Sbjct: 136 DSRRNLVSAWNVSELDQMALMPCHLLFQLYVANDTLSLQVYQRSADMFLGVPFNIASYAA 195 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + G+ I T GD H+YNNH EQ QL R PR PQ+ +N DL S+ Sbjct: 196 LTHMFAQQAGLKVGDLIWTGGDCHIYNNHVEQVQEQLFREPREYPQLKLN-KAKDLFSYD 254 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + DF ++ Y+PH AI A+VSV Sbjct: 255 FADFEVQGYDPHPAIKAQVSV 275 >gi|255321180|ref|ZP_05362346.1| thymidylate synthase [Acinetobacter radioresistens SK82] gi|255301734|gb|EET80985.1| thymidylate synthase [Acinetobacter radioresistens SK82] Length = 280 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 161/280 (57%), Positives = 201/280 (71%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+H+++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRQYLDLLQHILEHGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP---DYDG-- 106 WFL+GD+NV YL + V+IWDEWA + GELGP+YG QWR++ + DG Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPTGELGPVYGHQWRNFGATQNEDGSY 120 Query: 107 --NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 N DQIS ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V NGKLSCQLY Sbjct: 121 QQNGFDQISWLINEIKTNPNSRRLIVSGWNPKEASQVALPPCHTLFQFFVQNGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V Q G+F+ T GD HLY NHFEQA LQL R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLQVGDFVWTGGDTHLYANHFEQARLQLGRDP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + + F++ED + +Y H AI A V+V Sbjct: 241 LELCQLKLNPEVKSIFDFKFEDIEIINYHSHPAIKAPVAV 280 >gi|184156788|ref|YP_001845127.1| thymidylate synthase [Acinetobacter baumannii ACICU] gi|239500809|ref|ZP_04660119.1| thymidylate synthase [Acinetobacter baumannii AB900] gi|332873201|ref|ZP_08441158.1| thymidylate synthase [Acinetobacter baumannii 6014059] gi|183208382|gb|ACC55780.1| Thymidylate synthase [Acinetobacter baumannii ACICU] gi|322506680|gb|ADX02134.1| thyA [Acinetobacter baumannii 1656-2] gi|323516555|gb|ADX90936.1| thymidylate synthase [Acinetobacter baumannii TCDC-AB0715] gi|332738713|gb|EGJ69583.1| thymidylate synthase [Acinetobacter baumannii 6014059] Length = 280 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP++ D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|260556178|ref|ZP_05828397.1| thymidylate synthase [Acinetobacter baumannii ATCC 19606] gi|193076274|gb|ABO10913.2| thymidylate synthase [Acinetobacter baumannii ATCC 17978] gi|260410233|gb|EEX03532.1| thymidylate synthase [Acinetobacter baumannii ATCC 19606] Length = 280 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLDVGDFVWTGGDTHLYANHFEQAKLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP++ D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|121998826|ref|YP_001003613.1| thymidylate synthase [Halorhodospira halophila SL1] gi|166231707|sp|A1WYP9|TYSY_HALHL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|121590231|gb|ABM62811.1| thymidylate synthase [Halorhodospira halophila SL1] Length = 264 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 155/264 (58%), Positives = 189/264 (71%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++HV++ G + DRTG GT S FG+QMRFDL GFPL+TTK+V W+ V ELL Sbjct: 1 MRAYLDLVQHVLEHGHRKEDRTGTGTLSVFGHQMRFDLEAGFPLVTTKRVFWRGVAEELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RG +N L GV IW WAD DGELGP+YG QWRSW DG IDQ+ ++ LR Sbjct: 61 WFIRGSTNARELEDKGVRIWSPWADPDGELGPVYGAQWRSWRAADGREIDQLQQVLTELR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRRH+VSAWNV +++M LPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 QRPDSRRHLVSAWNVGELERMNLPPCHLLFQFYVAEGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A +G + GEFI T GD HLY NH QA QLSR+PR LP + I+P + DL Sbjct: 181 YSLLTHLVARHVGLEVGEFIWTGGDCHLYLNHLAQAREQLSRAPRPLPTLHIDPGVTDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + RYE L Y+PH + A V+V Sbjct: 241 AVRYEHLRLAGYDPHPKLTAPVAV 264 >gi|256394947|ref|YP_003116511.1| thymidylate synthase [Catenulispora acidiphila DSM 44928] gi|256361173|gb|ACU74670.1| thymidylate synthase [Catenulispora acidiphila DSM 44928] Length = 277 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 155/262 (59%), Positives = 195/262 (74%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL+ V+ G+ + DRTGVGTRS FG+Q+R+ L GFPL+TTKKVH+KSV +ELLWF Sbjct: 17 QYEDLLQRVLTSGTVKADRTGVGTRSLFGHQLRYRLQDGFPLITTKKVHFKSVAYELLWF 76 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG+ NV +L HGVSIWDEWAD +G+LGP+YGVQWRSWP DG +DQI+ +++ LR D Sbjct: 77 LRGEGNVRWLQEHGVSIWDEWADAEGDLGPVYGVQWRSWPTPDGRHVDQIAEVLRLLRTD 136 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNV + MALPPCH FQFYV +G LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 137 PDSRRIVVSAWNVGELTNMALPPCHAFFQFYVADGALSCQLYQRSADMFLGVPFNIASYA 196 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A+ G G+ + T GD+H+Y+NH EQA L L+R R P + + P L + Sbjct: 197 LLTHMIAAQTGLAVGDLVWTGGDIHIYDNHVEQARLLLTREARLFPTLELKPA-DSLFDY 255 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YED + Y+PH AI A V+V Sbjct: 256 SYEDIAVLGYDPHPAIKAPVAV 277 >gi|149377241|ref|ZP_01894988.1| Thymidylate synthase [Marinobacter algicola DG893] gi|149358429|gb|EDM46904.1| Thymidylate synthase [Marinobacter algicola DG893] Length = 279 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 152/279 (54%), Positives = 188/279 (67%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ V+ G DR DRTGVGTRS FG Q+RFDL GFPL+TTKKVH +S++ ELL Sbjct: 1 MKAYLDLMKDVVDNGMDRGDRTGVGTRSVFGRQIRFDLQGGFPLVTTKKVHLRSIIQELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G ++ ++L VSIW+EWA ++G+LGPIYG QWRSW DG+ +DQIS +++ +R Sbjct: 61 WFLQGSTDNNWLKERNVSIWNEWALENGDLGPIYGKQWRSWHCPDGSTVDQISEVIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWN A + MAL PCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 NKPNSRRLIVSAWNPAELPDESIGPQDNVRQGRMALAPCHCLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLSRSPR 225 D+FLG+PFNIASY+LLT M+A GEF+HT GD HLY NH QL R PR Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLGVGEFVHTFGDCHLYQNHLTDNIVFEQLKREPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LPQ++I + + EDF YEPH I A ++V Sbjct: 241 ALPQLVIKRKPSSIFEYELEDFEFDGYEPHPGIKAPIAV 279 >gi|119025406|ref|YP_909251.1| thymidylate synthase [Bifidobacterium adolescentis ATCC 15703] gi|118764990|dbj|BAF39169.1| thymidylate synthase [Bifidobacterium adolescentis ATCC 15703] Length = 266 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 146/265 (55%), Positives = 187/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRF+L FPLLTTK V +K + +ELLWFL Sbjct: 3 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFNLKDSFPLLTTKTVFFKGLAYELLWFL 62 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L H V IWDEWAD++G+LGP+YG QWRSWP D IDQIS+++ + Sbjct: 63 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 123 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDIFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G + GEF+ T GD H+Y+NH +Q QLSR+P PQ+ I L Sbjct: 183 SYSLLTLMMAQQTGLEPGEFVWTGGDCHVYDNHIDQVLEQLSRTPYPYPQIRI-RKADSL 241 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + +Y+ H I A V+V Sbjct: 242 FDYDYSDFEIVNYQHHPTIKAPVAV 266 >gi|269957617|ref|YP_003327406.1| thymidylate synthase [Xylanimonas cellulosilytica DSM 15894] gi|269306298|gb|ACZ31848.1| thymidylate synthase [Xylanimonas cellulosilytica DSM 15894] Length = 272 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 159/261 (60%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LLR V+ G+ + DRTG GT S FG Q+R+DLS+GFPL+TTK+VH KSVV+ELLWFL Sbjct: 13 YENLLRDVLAHGTHKDDRTGTGTTSVFGRQLRYDLSQGFPLITTKRVHLKSVVYELLWFL 72 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L HGVSIWDEWA GELGP+YGVQWRSWP DG +DQIS +V LR +P Sbjct: 73 RGESNVRWLQEHGVSIWDEWASPAGELGPVYGVQWRSWPTPDGAHVDQISQVVDQLRTNP 132 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRHIVSAWNVA I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 133 DSRRHIVSAWNVAEIKNMALPPCHLLFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 192 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH Q QLSR P ++ + P + + Sbjct: 193 LTHMVAAQTGLDVGEFVWTGGDCHIYDNHLAQVTEQLSRDPYPYARLELAPR-DSIFDYT 251 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y+D + Y+ H AI A V+V Sbjct: 252 YDDVVVHDYQHHPAIKAAVAV 272 >gi|172041200|ref|YP_001800914.1| thymidylate synthase [Corynebacterium urealyticum DSM 7109] gi|171852504|emb|CAQ05480.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 273 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL ++ G+ + DRTG GT S FG Q+RF+L++ FPL+TTK VH KSVV ELLWFL Sbjct: 14 YEDLLSKILAEGAKKDDRTGTGTTSLFGQQIRFNLAESFPLITTKSVHVKSVVGELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 GDSNV +L +G+ IW+EWAD+DG+LGP+YGVQWRSWP DG IDQIS ++ L+ +P Sbjct: 74 SGDSNVRWLQDNGIRIWNEWADEDGDLGPVYGVQWRSWPTPDGRHIDQISQALEMLKQNP 133 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 134 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 193 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEFI T GD H+Y+NH EQ +LQLSR PR PQ+ + D+ S+ Sbjct: 194 LTHMFAQQTGLEVGEFIWTGGDCHIYDNHREQVELQLSREPRPYPQLEL-TKAKDMFSYG 252 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED Y+PH I AKV+V Sbjct: 253 FEDVNFVGYDPHPVIKAKVAV 273 >gi|313159542|gb|EFR58905.1| thymidylate synthase [Alistipes sp. HGB5] Length = 299 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 195/298 (65%), Gaps = 35/298 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLLR + G R DRTG GT+ FG+QMRFDL++GFPLLTTKKV K V+HELL Sbjct: 1 MKQYLDLLRRIKTEGVVRGDRTGTGTKGVFGHQMRFDLAEGFPLLTTKKVFLKGVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------------D 85 WFL GD+N+ YL +GV IWD A Sbjct: 61 WFLAGDTNIKYLVDNGVHIWDNDAFRYYNELCVRHGVLPVDRDTFLRAAQEGVESPVEGY 120 Query: 86 KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 K G+L +YG QWRSWP DG V+DQI+ V +R++P SRR +VSAWNVA ++ MALPP Sbjct: 121 KFGDLNHVYGYQWRSWPKPDGTVVDQIAQAVGLIRSNPESRRILVSAWNVAEVEDMALPP 180 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 CH LFQFYV GKLSCQLYQRS D FLG+PFNIASY+LLT+M A V G Q GEF+HTLGD Sbjct: 181 CHVLFQFYVAEGKLSCQLYQRSADTFLGVPFNIASYALLTLMTAQVCGLQPGEFVHTLGD 240 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 HLY NH EQ D QL+R PR LP M +NP + L FRY DFTL Y+P AI A +S Sbjct: 241 THLYLNHLEQVDEQLAREPRPLPVMRLNPAVKSLFDFRYGDFTLEGYDPWPAIKAPMS 298 >gi|163735032|ref|ZP_02142469.1| thymidylate synthase [Roseobacter litoralis Och 149] gi|161391814|gb|EDQ16146.1| thymidylate synthase [Roseobacter litoralis Och 149] Length = 277 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 147/277 (53%), Positives = 204/277 (73%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D LR +++FG + DRTG GT S FG QMR+ LS GFPL+TTKK+H +S+ HELL Sbjct: 1 MQQYHDALRTILEFGEESTDRTGTGTTSYFGMQMRYRLSDGFPLVTTKKLHLRSIFHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-------------PDYDGN 107 WFL GD+N+ YL +GV IWDEWAD++G+LGP+YG QWR++ P + G Sbjct: 61 WFLSGDTNIRYLQENGVKIWDEWADENGDLGPVYGHQWRAFSAGAQTGDVKDDEPLHIGR 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQ+++++ ++++ P SRR IVSAWN A + +MALPPCH L+Q V NG++ QLYQRS Sbjct: 121 GVDQVANLIDTIKSSPDSRRLIVSAWNPADVPRMALPPCHALWQVRVLNGRMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASYS+L +MLA V G++ G+F+HTLGD H+Y+NH +Q +LQL+R+P+ L Sbjct: 181 ADMFLGVPFNIASYSMLLVMLAHVTGYEPGDFVHTLGDAHIYSNHMDQVNLQLTRTPKPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ IN ++ + FRYEDF + Y+P AI A V+V Sbjct: 241 PKLRINRDVSSIFDFRYEDFEVIGYDPDPAIRAPVAV 277 >gi|262374153|ref|ZP_06067430.1| thymidylate synthase [Acinetobacter junii SH205] gi|262311164|gb|EEY92251.1| thymidylate synthase [Acinetobacter junii SH205] Length = 280 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 162/280 (57%), Positives = 200/280 (71%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRTYLDLLQHILDNGGDKDDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP---DYDG-- 106 WFL+GD+NV YL + V+IWDEWA +GELGP+YG QWR++ + DG Sbjct: 61 WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGASQNEDGSY 120 Query: 107 --NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 N DQI +V ++ +P SRR IVS WN K+ALPPCH LFQF+V + KLSCQLY Sbjct: 121 QQNGFDQIKWLVNEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVHDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLDVGDFVWTGGDTHLYANHFEQAKLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP+I D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPDIKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|153208297|ref|ZP_01946676.1| thymidylate synthase [Coxiella burnetii 'MSU Goat Q177'] gi|212219260|ref|YP_002306047.1| thymidylate synthase [Coxiella burnetii CbuK_Q154] gi|120576081|gb|EAX32705.1| thymidylate synthase [Coxiella burnetii 'MSU Goat Q177'] gi|212013522|gb|ACJ20902.1| thymidylate synthase [Coxiella burnetii CbuK_Q154] Length = 264 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 149/264 (56%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+ ++ G + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL Sbjct: 1 MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W DG +DQ+ +++ ++ Sbjct: 61 WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A + GEFI + GD H+YN H +Q QLSR PR LPQ+IIN + L Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINCDPSSLY 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + + DF++ +Y PH AI A V+V Sbjct: 241 DYNFNDFSIVNYHPHPAIKAPVAV 264 >gi|311744165|ref|ZP_07717970.1| thymidylate synthase [Aeromicrobium marinum DSM 15272] gi|311312520|gb|EFQ82432.1| thymidylate synthase [Aeromicrobium marinum DSM 15272] Length = 269 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 151/269 (56%), Positives = 201/269 (74%), Gaps = 5/269 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLD++R ++ G ++ DRTG GT S FG+Q R+DL GFPL+TTK++H SVV ELL Sbjct: 1 MQAYLDIIRRILDEGVEKSDRTGTGTLSVFGHQTRYDLRAGFPLVTTKRIHLPSVVGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ GD+N ++L HGV+IWDEWAD++G+LGP+YG QWRSWP G +DQ++++VQ L Sbjct: 61 WFVSGDTNTAFLREHGVTIWDEWADENGDLGPVYGHQWRSWPTPSGQHVDQLAAVVQQLG 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-----NGKLSCQLYQRSGDVFLGIP 175 DP SRRH+VSAWNVA +D MAL PCH LFQFYV+ G+LSCQLYQRS DVFLG+P Sbjct: 121 VDPDSRRHLVSAWNVADLDAMALAPCHALFQFYVEPRTDGPGRLSCQLYQRSADVFLGVP 180 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT M+A V G + G+F+HTLGD HLY NH +QA QL+R+PR LP + ++P Sbjct: 181 FNIASYALLTHMVAQVAGLEVGDFVHTLGDAHLYLNHLDQAREQLTRAPRPLPDLWLDPQ 240 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + F ++ + Y+PH +I A ++V Sbjct: 241 VDSIDGFGFDSIKVTGYDPHPSIKAPIAV 269 >gi|260579743|ref|ZP_05847601.1| thymidylate synthase [Corynebacterium jeikeium ATCC 43734] gi|258602129|gb|EEW15448.1| thymidylate synthase [Corynebacterium jeikeium ATCC 43734] Length = 273 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 159/261 (60%), Positives = 197/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ G+ + DRTG GT S FG Q+R+DLS GFPL+TTK VH KSVV ELLWFL Sbjct: 14 YEDLLREILETGTPKGDRTGTGTTSLFGRQIRYDLSAGFPLITTKSVHVKSVVGELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +G+ IW+EWAD++G+LGP+YGVQWRSWP +G IDQI+ +++LR +P Sbjct: 74 RGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPNGQHIDQIAGALETLRTNP 133 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 134 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 193 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEFI T GD H+Y+NH EQ LQLSR R PQ+ +N D+ S+ Sbjct: 194 LTHMFAQQSGLEVGEFIWTGGDCHIYDNHVEQVQLQLSRDARPYPQLKLN-KAADMFSYD 252 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + D Y+PH I AKV+V Sbjct: 253 FSDIEFTGYDPHPVIKAKVAV 273 >gi|30690081|ref|NP_195183.2| THY-2 (thymidylate synthase 2); dihydrofolate reductase/ thymidylate synthase [Arabidopsis thaliana] gi|150421542|sp|Q05763|DRTS2_ARATH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase 2; Short=DHFR-TS 2; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|110743754|dbj|BAE99713.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|332660994|gb|AEE86394.1| thymidylate synthase [Arabidopsis thaliana] Length = 565 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 131/281 (46%), Positives = 174/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 285 YLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 344 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G +N L G+ IWD A ++G+LGP+YG QWR + D Sbjct: 345 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 404 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 405 YTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 464 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT +LA V G+FIH +GD H+Y NH QL Sbjct: 465 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 524 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP D+ SF +DF L Y+PH I K++V Sbjct: 525 PKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 565 >gi|300858051|ref|YP_003783034.1| thymidylate synthase [Corynebacterium pseudotuberculosis FRC41] gi|300685505|gb|ADK28427.1| Thymidylate synthase [Corynebacterium pseudotuberculosis FRC41] gi|302205773|gb|ADL10115.1| thymidylate synthase [Corynebacterium pseudotuberculosis C231] gi|302330331|gb|ADL20525.1| thymidylate synthase [Corynebacterium pseudotuberculosis 1002] gi|308276007|gb|ADO25906.1| thymidylate synthase [Corynebacterium pseudotuberculosis I19] Length = 265 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 158/261 (60%), Positives = 194/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ GS + DRTG GT S F QMRFDLS+ FPL+TTKKV+W+ VV ELLWFL Sbjct: 6 YEDLLRKILSEGSHKDDRTGTGTTSLFAQQMRFDLSESFPLITTKKVYWRGVVGELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G SN+++L + + IWDEWA +DGELGPIYGVQWRSWP G +DQIS + L+ +P Sbjct: 66 QGSSNITWLQDNNIHIWDEWASEDGELGPIYGVQWRSWPTPHGAHVDQISGALDMLKNNP 125 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNVA +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYS Sbjct: 126 DSRRNIVSAWNVAELDNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSA 185 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEFI T GD H+Y+NH EQ ++QLSR PR PQ+ + DL S+ Sbjct: 186 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHREQVEIQLSREPRPYPQLELA-KAKDLFSYD 244 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + DF + Y+PH AI A+V+V Sbjct: 245 FADFQVIGYDPHPAIRAEVAV 265 >gi|156406767|ref|XP_001641216.1| predicted protein [Nematostella vectensis] gi|156228354|gb|EDO49153.1| predicted protein [Nematostella vectensis] Length = 306 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 133/283 (46%), Positives = 184/283 (65%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLD++R++++ G+ + DRTG GT+S FG QMRF L G FPLLTTK+V W+ V ELLW Sbjct: 24 QYLDMIRYIMENGTVKTDRTGTGTKSVFGAQMRFSLRDGVFPLLTTKRVFWRGVAEELLW 83 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F++G +N L + IWD ++G+LGP+YG QWR + Sbjct: 84 FVKGCTNAKVLADKNIHIWDANGSRGFLDRQGLSHREEGDLGPVYGFQWRHFGAKYVDMH 143 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ +P RR I+ AWN + I MALPPCH QFYV NG+LSC Sbjct: 144 TDYTGQGVDQLAQVIDKIKNNPDDRRIIMLAWNPSDIPLMALPPCHAFVQFYVANGELSC 203 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFNIASYSLLT M+A V G + G+F+H+LGD H+Y NHFE + QL Sbjct: 204 QLYQRSGDMGLGVPFNIASYSLLTYMIAHVCGLKPGDFVHSLGDAHVYLNHFEALEEQLK 263 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++I + D+ F ++DF + Y+PH I +++V Sbjct: 264 REPRAFPSLVIKRQVDDIDQFTFDDFEIVGYKPHPKIKMEMAV 306 >gi|212716385|ref|ZP_03324513.1| hypothetical protein BIFCAT_01304 [Bifidobacterium catenulatum DSM 16992] gi|212660638|gb|EEB21213.1| hypothetical protein BIFCAT_01304 [Bifidobacterium catenulatum DSM 16992] Length = 303 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 149/265 (56%), Positives = 186/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL Sbjct: 40 YEDLVRRILTEGTLKSDRTGTGTISLFGQQMRFDLSEYFPLLTTKTVFFKGLAYELLWFL 99 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L H V IWDEWAD++G+LGP+YG QWRSWP D IDQIS+++ + Sbjct: 100 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLV 159 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 160 KNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 219 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G Q GEF+ T GD H+Y+NH +Q QLSR P P + IN L Sbjct: 220 SYSLLTLMIAQQAGLQPGEFVWTGGDCHVYDNHIDQVLEQLSRDPYPYPHIRIN-KAASL 278 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y H I A V+V Sbjct: 279 FDYDYSDFEIVDYRHHPTIKAPVAV 303 >gi|169822911|gb|ACA96515.1| thymidylate synthase [Expression vector pYB100] Length = 325 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 44 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 103 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 104 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 163 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 164 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 223 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 224 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 283 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 284 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 325 >gi|192362015|ref|YP_001980991.1| thymidylate synthase [Cellvibrio japonicus Ueda107] gi|190688180|gb|ACE85858.1| thymidylate synthase [Cellvibrio japonicus Ueda107] Length = 282 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 150/279 (53%), Positives = 190/279 (68%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R V++ G R DRTG GTRS FG Q+RFDL++GFPL+TTK VH KSV+ ELL Sbjct: 4 MKQYLDLMRDVVENGVTRGDRTGTGTRSVFGRQLRFDLARGFPLVTTKTVHLKSVIVELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G ++V++L G SIW+EWA + G+LGP+YG QWRSW DG+ IDQIS +++ ++ Sbjct: 64 WFLQGRTDVTWLQERGCSIWNEWAAESGDLGPVYGKQWRSWACPDGSTIDQISQVIEQIK 123 Query: 121 ADPYSRRHIVSAWNVALIDKMALPP-------------CHCLFQFYVDNGKLSCQLYQRS 167 A P SRR IVSAWN A + AL P CH LFQFYV +GKLSCQLYQRS Sbjct: 124 AKPNSRRLIVSAWNPADLPDEALSPQENVRQGRMALAACHTLFQFYVADGKLSCQLYQRS 183 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ--ADLQLSRSPR 225 D+FLG+PFNIASY+LLT M+A G+F+HT GD HLYNNH QL+R PR Sbjct: 184 ADLFLGVPFNIASYALLTHMIAQQCDLGVGDFVHTFGDCHLYNNHITDDIVYEQLTREPR 243 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP++II + + EDF Y+P+ I A ++V Sbjct: 244 NLPRLIIRRRPSSIFDYELEDFEFEGYQPYPRIAAPIAV 282 >gi|294649226|ref|ZP_06726664.1| thymidylate synthase [Acinetobacter haemolyticus ATCC 19194] gi|292824893|gb|EFF83658.1| thymidylate synthase [Acinetobacter haemolyticus ATCC 19194] Length = 280 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 162/280 (57%), Positives = 199/280 (71%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP---DYDG-- 106 WFL+GD+NV YL + V+IWDEWA +GELGP+YG QWR++ + DG Sbjct: 61 WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGATQNEDGSY 120 Query: 107 --NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 N DQI ++ ++ +P SRR IVS WN K+ALPPCH LFQF+V + KLSCQLY Sbjct: 121 QQNGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSRDP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEITDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|162464289|ref|NP_001104916.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea mays] gi|6685381|sp|O81395|DRTS_MAIZE RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|3309066|gb|AAC26003.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea mays] Length = 521 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 134/283 (47%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L+ +I+ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW Sbjct: 239 YQYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRKNFPLLTTKRVFWRGVVEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F+ G +N L G+ IWD ++G+LGPIYG QWR + Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASREYLNSVGLAHREEGDLGPIYGFQWRHFGAEYTDMH 358 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ DP RR I+SAWN + + KMALPPCH QFYV+NG+LSC Sbjct: 359 ADYTGKGFDQLMDVIDKIKNDPEDRRIILSAWNPSDLKKMALPPCHMFAQFYVENGELSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G+F+H +GD H+Y NH + Q+ Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRNHVRALEEQIQ 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP+ D+ SF DF L Y+PH I K++V Sbjct: 479 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKIEMKMAV 521 >gi|332670062|ref|YP_004453070.1| thymidylate synthase [Cellulomonas fimi ATCC 484] gi|332339100|gb|AEE45683.1| thymidylate synthase [Cellulomonas fimi ATCC 484] Length = 281 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 152/261 (58%), Positives = 191/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+Q+RFDLS+GFPL+TTK+VH +SVV ELLWFL Sbjct: 22 YEDLLRLVMATGTPKSDRTGTGTRSVFGHQLRFDLSQGFPLVTTKRVHLRSVVQELLWFL 81 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L GV+IWDEWAD DGELGP+YGVQWRSWP DG +DQI+ +V++LR DP Sbjct: 82 RGESNVRWLREQGVTIWDEWADADGELGPVYGVQWRSWPTPDGGAVDQITQLVENLRRDP 141 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRH+VSAWNVA I MAL PCH FQ YV +G+LS Q+YQRS D+FLG+PFN+ASY+L Sbjct: 142 DSRRHLVSAWNVAAIPDMALAPCHAFFQAYVADGRLSLQVYQRSADLFLGVPFNLASYAL 201 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA + G+ + T GD H+Y+NH +Q QLSR P P + + +L +R Sbjct: 202 LTHMLAQQTDLEVGDLVWTGGDCHVYDNHVDQVREQLSREPYAPPTLRL-RRAPSILEYR 260 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + Y H I A V+V Sbjct: 261 FEDVEVVDYRHHPTIKAPVAV 281 >gi|50083753|ref|YP_045263.1| thymidylate synthase [Acinetobacter sp. ADP1] gi|62901304|sp|Q6FER7|TYSY_ACIAD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|49529729|emb|CAG67441.1| thymidylate synthase (TS) (TSase) [Acinetobacter sp. ADP1] Length = 280 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 160/280 (57%), Positives = 198/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL Sbjct: 1 MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL H VSIWDEWA +GELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDHKVSIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGATQNSDGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V +GKLSCQLY Sbjct: 121 KNDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I DL F++ED + Y+ H AI A V+V Sbjct: 241 LPLCQLKLNPEITDLFDFKFEDIEIVDYQSHPAIKAPVAV 280 >gi|171057945|ref|YP_001790294.1| thymidylate synthase [Leptothrix cholodnii SP-6] gi|170775390|gb|ACB33529.1| Thymidylate synthase [Leptothrix cholodnii SP-6] Length = 282 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 156/269 (57%), Positives = 190/269 (70%), Gaps = 7/269 (2%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 Q+ DL+R V G + DRTG GTRS FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF Sbjct: 14 QFEDLMRLVHTTGVAKGDRTGTGTRSLFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG+ NV +L G +IWDEWA DG+LGP+YGVQWRSWP DG IDQI+ +VQ LR++ Sbjct: 74 LRGERNVRWLQERGCTIWDEWARDDGDLGPVYGVQWRSWPTADGGHIDQIAEVVQQLRSN 133 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175 P SRR IVSAWNVA + +MAL PCH LFQFYV GKLSCQLYQRS D+FLG+P Sbjct: 134 PDSRRIIVSAWNVAELPQMALMPCHALFQFYVAPATHEGGRGKLSCQLYQRSADIFLGVP 193 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNIASY+LLT MLA G+FI T GD HLY+NH Q + QL+R+P P + I Sbjct: 194 FNIASYALLTHMLAQQCDLDVGDFIWTGGDCHLYDNHTTQVETQLARTPFAYPTLHIKRR 253 Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + +DF + Y+ H AI A V+V Sbjct: 254 PASIFDYACDDFEVLDYQHHPAIKAPVAV 282 >gi|225350958|ref|ZP_03741981.1| hypothetical protein BIFPSEUDO_02537 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158414|gb|EEG71656.1| hypothetical protein BIFPSEUDO_02537 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 303 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 149/265 (56%), Positives = 186/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL Sbjct: 40 YEDLVRKILTEGTLKSDRTGTGTVSLFGQQMRFDLSEYFPLLTTKTVFFKGLAYELLWFL 99 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L V IWDEWAD++G+LGP+YG QWRSWP D IDQIS+++ + Sbjct: 100 KGSTNVRWLQERNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLV 159 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 160 ENHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 219 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G Q GEF+ T GD H+Y+NH +Q QLSR P PQ+ IN L Sbjct: 220 SYSLLTLMIAQQAGLQPGEFVWTGGDCHVYDNHIDQVLEQLSRDPYPYPQIRIN-KADSL 278 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y+ H I A V+V Sbjct: 279 FDYDYSDFEIVGYQHHPTIKAPVAV 303 >gi|261338193|ref|ZP_05966077.1| thymidylate synthase [Bifidobacterium gallicum DSM 20093] gi|270276839|gb|EFA22693.1| thymidylate synthase [Bifidobacterium gallicum DSM 20093] Length = 289 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 153/265 (57%), Positives = 195/265 (73%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S FG QMRFDL++GFPLLTTK+V K + +ELLWFL Sbjct: 26 YEDLLRKILMEGNLKSDRTGTGTISLFGQQMRFDLTQGFPLLTTKRVFLKGITYELLWFL 85 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L H V IWDEWAD+ G+LGP+YGVQWRSWP D IDQIS++++ + Sbjct: 86 KGSSNVRWLQEHNVHIWDEWADEHGDLGPVYGVQWRSWPAPTADDPNRTIDQISNVLELI 145 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R +P SRR +VSAWN A +++MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIA Sbjct: 146 RTNPDSRRMVVSAWNPAEVEQMALPPCHALFQFYVANGKLSCQLYQRSCDMFLGVPFNIA 205 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYS+LTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P PQ+ I L Sbjct: 206 SYSMLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEI-RKADSL 264 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + ++DFT+++Y+ H I A ++V Sbjct: 265 FEYDWDDFTIQNYQYHPTIKAPIAV 289 >gi|262369944|ref|ZP_06063271.1| thymidylate synthase [Acinetobacter johnsonii SH046] gi|262314983|gb|EEY96023.1| thymidylate synthase [Acinetobacter johnsonii SH046] Length = 280 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 159/280 (56%), Positives = 199/280 (71%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL Sbjct: 1 MKTYLDLLQHILDHGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWPD-------Y 104 WFL+GD+NV YL + VSIWDEW+ +GELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLQDNKVSIWDEWSTAEQTARFGRPEGELGPVYGHQWRNFGATKKADGLY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI+ +V ++ +P SRR IVS WN ++ALPPCH LFQF+V NGKLSCQLY Sbjct: 121 EKDGFDQIAWLVNEIKTNPNSRRLIVSGWNPQEAGQVALPPCHTLFQFFVHNGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + D+ F++ED + YE H I A V+V Sbjct: 241 LGLCQLKLNPAVKDIFDFKFEDIEIVGYESHPGIKAPVAV 280 >gi|110679164|ref|YP_682171.1| thymidylate synthase [Roseobacter denitrificans OCh 114] gi|123172620|sp|Q168V8|TYSY_ROSDO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|109455280|gb|ABG31485.1| thymidylate synthase [Roseobacter denitrificans OCh 114] Length = 277 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 149/277 (53%), Positives = 201/277 (72%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D LR +++ G + DRTG GT S FG QMR+ LS GFPL+TTKK+H +S+ HELL Sbjct: 1 MQQYHDALRTILECGEESTDRTGTGTISYFGMQMRYPLSDGFPLVTTKKLHLRSIFHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-------------PDYDGN 107 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR++ P Y G Sbjct: 61 WFLSGDTNIRYLQDNGVSIWDEWADENGDLGPVYGHQWRAFSALSPTEEVKDGEPLYLGR 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQ+++++ +++ P SRR IVSAWN A + +MALPPCH L+Q V NG++ QLYQRS Sbjct: 121 GVDQVTNLIDMIKSSPDSRRMIVSAWNPADVPRMALPPCHALWQVRVLNGRMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASYSLL +MLA V G++ G+F+HTLGD H+Y+NH +Q +LQL+R+P+ L Sbjct: 181 ADMFLGVPFNIASYSLLLVMLAHVTGYEPGDFVHTLGDAHIYSNHMDQVNLQLTRTPKPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + IN + + FRYEDF + Y+P AI A V+V Sbjct: 241 PTLRINRQVSSIFDFRYEDFEVIGYDPDPAIRAPVAV 277 >gi|226951963|ref|ZP_03822427.1| thymidylate synthase [Acinetobacter sp. ATCC 27244] gi|226837301|gb|EEH69684.1| thymidylate synthase [Acinetobacter sp. ATCC 27244] Length = 300 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 161/280 (57%), Positives = 198/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 21 MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 80 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW---------ADKDGELGPIYGVQWRSWP---DYDG-- 106 WFL+GD+NV YL + V+IWDEW +GELGP+YG QWR++ + DG Sbjct: 81 WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFDRPEGELGPVYGHQWRNFGATQNEDGSY 140 Query: 107 --NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 N DQI ++ ++ +P SRR IVS WN K+ALPPCH LFQF+V + KLSCQLY Sbjct: 141 QQNGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVQDNKLSCQLY 200 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQLSR P Sbjct: 201 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSRDP 260 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I D+ F++ED + YE H AI A V+V Sbjct: 261 LPLCQLKLNPEITDIFDFKFEDIEIVGYESHPAIKAPVAV 300 >gi|68535511|ref|YP_250216.1| thymidylate synthase [Corynebacterium jeikeium K411] gi|123761908|sp|Q4JX59|TYSY_CORJK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|68263110|emb|CAI36598.1| thyA [Corynebacterium jeikeium K411] Length = 273 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 159/261 (60%), Positives = 197/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ G+ + DRTG GT S FG Q+R+DLS GFPL+TTK VH KSVV ELLWFL Sbjct: 14 YEDLLREILETGTPKGDRTGTGTTSLFGRQIRYDLSAGFPLITTKSVHVKSVVGELLWFL 73 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L +G+ IW+EWAD++G+LGP+YGVQWRSWP +G IDQI+ +++L+ +P Sbjct: 74 RGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPNGQHIDQIAGALETLQTNP 133 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ +D MALPPCH LFQ YV NGKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 134 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVANGKLSCQLYQRSADMFLGVPFNIASYSL 193 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEFI T GD H+Y+NH EQ LQLSR R PQ+ +N D+ S+ Sbjct: 194 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHVEQVKLQLSRDARPYPQLKLN-KAADMFSYD 252 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + D Y+PH I AKV+V Sbjct: 253 FSDIEFTGYDPHPVIKAKVAV 273 >gi|120403371|ref|YP_953200.1| thymidylate synthase [Mycobacterium vanbaalenii PYR-1] gi|166231718|sp|A1T7P4|TYSY_MYCVP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119956189|gb|ABM13194.1| thymidylate synthase [Mycobacterium vanbaalenii PYR-1] Length = 266 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL Sbjct: 7 YEDLLRLVLDTGTTKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L HGV+IWDEWA G+LGP+YGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNVRWLQEHGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGAHIDQISAALDLLRRDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVSGGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEFI T GD H+Y+NH EQ QLSR PR P++++ L + Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSREPRPYPELVLAQR-DSLFDYI 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED +++Y+PH AI A V+V Sbjct: 246 YEDVVIKNYDPHPAIKAPVAV 266 >gi|46190148|ref|ZP_00206347.1| COG0207: Thymidylate synthase [Bifidobacterium longum DJO10A] gi|189440651|ref|YP_001955732.1| thymidylate synthase [Bifidobacterium longum DJO10A] gi|296454779|ref|YP_003661923.1| Thymidylate synthase [Bifidobacterium longum subsp. longum JDM301] gi|312133956|ref|YP_004001295.1| thya [Bifidobacterium longum subsp. longum BBMN68] gi|317482133|ref|ZP_07941157.1| thymidylate synthase [Bifidobacterium sp. 12_1_47BFAA] gi|322691787|ref|YP_004221357.1| thymidylate synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|189429086|gb|ACD99234.1| Thymidylate synthase [Bifidobacterium longum DJO10A] gi|291516397|emb|CBK70013.1| thymidylate synthase [Bifidobacterium longum subsp. longum F8] gi|296184211|gb|ADH01093.1| Thymidylate synthase [Bifidobacterium longum subsp. longum JDM301] gi|311773253|gb|ADQ02741.1| ThyA [Bifidobacterium longum subsp. longum BBMN68] gi|316916492|gb|EFV37890.1| thymidylate synthase [Bifidobacterium sp. 12_1_47BFAA] gi|320456643|dbj|BAJ67265.1| thymidylate synthase [Bifidobacterium longum subsp. longum JCM 1217] Length = 290 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 150/265 (56%), Positives = 188/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP IDQIS+++ + Sbjct: 87 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++KMALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADDKLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QL R P P + I L Sbjct: 207 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEI-RKADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290 >gi|189095969|pdb|2RD8|A Chain A, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016200|pdb|2RDA|A Chain A, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016201|pdb|2RDA|B Chain B, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016202|pdb|2RDA|C Chain C, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016203|pdb|2RDA|D Chain D, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016204|pdb|2RDA|E Chain E, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|190016205|pdb|2RDA|F Chain F, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 gi|295982231|pdb|3H9K|A Chain A, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|295982232|pdb|3H9K|B Chain B, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|295982233|pdb|3H9K|C Chain C, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|295982234|pdb|3H9K|D Chain D, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|295982235|pdb|3H9K|E Chain E, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|296863446|pdb|3HB8|A Chain A, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|296863447|pdb|3HB8|B Chain B, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|296863448|pdb|3HB8|C Chain C, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|296863449|pdb|3HB8|D Chain D, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|296863450|pdb|3HB8|E Chain E, Structures Of Thymidylate Synthase R163k With Substrates And Inhibitors Show Subunit Asymmetry gi|315364512|pdb|3OB7|A Chain A, Human Thymidylate Synthase R163k With Cys 195 Covalently Modified By Glutathione gi|315364513|pdb|3OB7|B Chain B, Human Thymidylate Synthase R163k With Cys 195 Covalently Modified By Glutathione gi|315364514|pdb|3OB7|C Chain C, Human Thymidylate Synthase R163k With Cys 195 Covalently Modified By Glutathione gi|315364515|pdb|3OB7|D Chain D, Human Thymidylate Synthase R163k With Cys 195 Covalently Modified By Glutathione gi|315364516|pdb|3OB7|E Chain E, Human Thymidylate Synthase R163k With Cys 195 Covalently Modified By Glutathione Length = 313 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|241765073|ref|ZP_04763065.1| Thymidylate synthase [Acidovorax delafieldii 2AN] gi|241365310|gb|EER60132.1| Thymidylate synthase [Acidovorax delafieldii 2AN] Length = 286 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 153/273 (56%), Positives = 187/273 (68%), Gaps = 11/273 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DL+RHV G D+ DRTG GT+S FG+QMRFDL +GFPL+TTKKVH KS++ ELLWF Sbjct: 14 QYEDLMRHVFTHGVDKGDRTGTGTKSVFGHQMRFDLREGFPLVTTKKVHLKSIIVELLWF 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQS 118 L G S+ +L GV+IWDEWA KDG+LGP+YGVQWRSWP IDQI ++ + Sbjct: 74 LTGSSSNLWLKERGVTIWDEWARKDGDLGPVYGVQWRSWPAPTPENPRGHIDQIQQVIDT 133 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVF 171 L+ +P SRR IVSAWNVA +DKMAL PCH FQFYV G LSCQLYQRS D+F Sbjct: 134 LKTNPDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPAQEPGGRGTLSCQLYQRSADIF 193 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLT M+A G+FI T GD H+Y+NH EQ QL R+P P + Sbjct: 194 LGVPFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHHEQVRTQLERAPYPYPTLR 253 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I + ++YEDF + Y+ H AI A V+V Sbjct: 254 IKRRPDSIFDYQYEDFEVLDYQCHPAIKAPVAV 286 >gi|260549117|ref|ZP_05823338.1| thymidylate synthase [Acinetobacter sp. RUH2624] gi|260407845|gb|EEX01317.1| thymidylate synthase [Acinetobacter sp. RUH2624] Length = 280 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 155/280 (55%), Positives = 196/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|323253293|gb|EGA37122.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] Length = 252 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 145/249 (58%), Positives = 187/249 (75%) Query: 16 SDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRH 75 D TG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + Sbjct: 4 HRENDGTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHEN 63 Query: 76 GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ DP SRR IVSAWNV Sbjct: 64 NVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNV 123 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LL M+A Sbjct: 124 GELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLD 183 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255 G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L +R++DF + Y+PH Sbjct: 184 VGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPH 243 Query: 256 AAILAKVSV 264 I A V++ Sbjct: 244 PGIKAPVAI 252 >gi|99081570|ref|YP_613724.1| thymidylate synthase [Ruegeria sp. TM1040] gi|123378854|sp|Q1GFV4|TYSY_SILST RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|99037850|gb|ABF64462.1| thymidylate synthase [Ruegeria sp. TM1040] Length = 277 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 146/277 (52%), Positives = 194/277 (70%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D L+H++ G + DRTG GT S FG Q R+DL++GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYHDALQHILDHGVETTDRTGTGTLSCFGMQQRYDLAEGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P Y Sbjct: 61 WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGYQWRKFPRLELAEGTLGDEPLYRAG 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQIS ++ +R P SRR IV+AWN + MALPPCH L+Q + GK+ QLYQRS Sbjct: 121 TVDQISELLDMIRKSPDSRRLIVTAWNPGDVPDMALPPCHSLWQLRILGGKMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LL MLA V G++ G F+HT+GD H+Y+NH EQ LQLSRSP++L Sbjct: 181 ADMFLGVPFNIASYALLLHMLAHVTGYEVGSFVHTMGDAHIYSNHMEQVKLQLSRSPKSL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+ I ++ + F+YEDF + Y+P I A V+V Sbjct: 241 PQLRIARDVSSIFDFKYEDFEILGYDPDPVIKAPVAV 277 >gi|15988336|pdb|1JU6|A Chain A, Human Thymidylate Synthase Complex With Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988337|pdb|1JU6|B Chain B, Human Thymidylate Synthase Complex With Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988338|pdb|1JU6|C Chain C, Human Thymidylate Synthase Complex With Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988339|pdb|1JU6|D Chain D, Human Thymidylate Synthase Complex With Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988342|pdb|1JUJ|A Chain A, Human Thymidylate Synthase Bound To Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988343|pdb|1JUJ|B Chain B, Human Thymidylate Synthase Bound To Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988344|pdb|1JUJ|C Chain C, Human Thymidylate Synthase Bound To Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate gi|15988345|pdb|1JUJ|D Chain D, Human Thymidylate Synthase Bound To Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate Length = 313 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G ++ DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVEKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|297702332|ref|XP_002828137.1| PREDICTED: thymidylate synthase-like isoform 1 [Pongo abelii] gi|297702334|ref|XP_002828138.1| PREDICTED: thymidylate synthase-like isoform 2 [Pongo abelii] Length = 313 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|30584493|gb|AAP36499.1| Homo sapiens thymidylate synthetase [synthetic construct] gi|60826011|gb|AAX36743.1| thymidylate synthetase [synthetic construct] gi|61365335|gb|AAX42692.1| thymidylate synthetase [synthetic construct] gi|61371785|gb|AAX43730.1| thymidylate synthetase [synthetic construct] gi|61371791|gb|AAX43731.1| thymidylate synthetase [synthetic construct] Length = 314 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|4507751|ref|NP_001062.1| thymidylate synthase [Homo sapiens] gi|136611|sp|P04818|TYSY_HUMAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|37479|emb|CAA26178.1| unnamed protein product [Homo sapiens] gi|220136|dbj|BAA00472.1| thymidylate synthase [Homo sapiens] gi|12803483|gb|AAH02567.1| Thymidylate synthetase [Homo sapiens] gi|15530267|gb|AAH13919.1| Thymidylate synthetase [Homo sapiens] gi|21104406|dbj|BAB93473.1| thymidylate synthetase [Homo sapiens] gi|30582461|gb|AAP35457.1| thymidylate synthetase [Homo sapiens] gi|53733365|gb|AAH83512.1| TYMS protein [Homo sapiens] gi|60655085|gb|AAX32106.1| thymidylate synthetase [synthetic construct] gi|60814259|gb|AAX36293.1| thymidylate synthetase [synthetic construct] gi|61355304|gb|AAX41125.1| thymidylate synthetase [synthetic construct] gi|119622126|gb|EAX01721.1| thymidylate synthetase, isoform CRA_f [Homo sapiens] gi|123982668|gb|ABM83075.1| thymidylate synthetase [synthetic construct] gi|189054310|dbj|BAG36830.1| unnamed protein product [Homo sapiens] gi|307685173|dbj|BAJ20517.1| thymidylate synthetase [synthetic construct] Length = 313 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|290560090|pdb|3EF9|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560119|pdb|3GH0|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|290560086|pdb|3EDW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560094|pdb|3EJL|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560095|pdb|3EJL|B Chain B, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560096|pdb|3EJL|C Chain C, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560097|pdb|3EJL|D Chain D, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|114672489|ref|XP_001150437.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] gi|114672491|ref|XP_001150499.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] gi|114672493|ref|XP_001150558.1| PREDICTED: thymidylate synthase isoform 5 [Pan troglodytes] Length = 313 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++++P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKSNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|229079406|ref|ZP_04211948.1| Thymidylate synthase [Bacillus cereus Rock4-2] gi|228703939|gb|EEL56383.1| Thymidylate synthase [Bacillus cereus Rock4-2] Length = 318 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 149/313 (47%), Positives = 196/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ YL +H +IW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE+++K G LG +YG QWR+W G DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETFDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED + Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLKIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|149721010|ref|XP_001492275.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Equus caballus] Length = 312 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R++L FPLLTTK+V WK V+ ELLWF Sbjct: 31 QYLGQIEHILRSGFRKEDRTGTGTLSVFGLQARYNLRDEFPLLTTKRVFWKGVLEELLWF 90 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N + L GV IWD +D G+LGP+YG QWR + Sbjct: 91 IKGSTNANELSCKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYKDMDS 150 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 151 DYSGQGVDQLQKVINTIKTNPDDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 210 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH + QL R Sbjct: 211 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIDPLKTQLQR 270 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF L Y PH I +++V Sbjct: 271 EPRPFPKLKILRKVETIDDFKAEDFQLEGYHPHPTIRMEMAV 312 >gi|327269847|ref|XP_003219704.1| PREDICTED: thymidylate synthase-like [Anolis carolinensis] Length = 307 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 134/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+ ++ +++FG + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 26 QYLNQIQQILRFGHKKEDRTGTGTLSLFGMQARYSLRDDFPLLTTKRVFWKGVLEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102 ++G +N L GV IW+ ++G+LGP+YG QWR + Sbjct: 86 IKGSTNAKELSTKGVKIWEANGSRQFLDQQGFLSREEGDLGPVYGFQWRHFGAEYKDMNT 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ ++R +P RR I+ AWN I MALPPCH L QFYV NG+LSCQ Sbjct: 146 DYTGQGVDQLQQVIDTIRNNPDDRRIIMCAWNPKDISAMALPPCHALCQFYVVNGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E +QL R Sbjct: 206 LYQRSGDMGLGVPFNIASYSLLTSMIAHVTGLKPGEFIHTLGDAHIYLNHIEPLKIQLQR 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + ++ F+ +DF + Y PH I +++V Sbjct: 266 QPRPFPKLKILRKVENINDFKADDFEIEGYNPHPTIKMEMAV 307 >gi|320094077|ref|ZP_08025892.1| thymidylate synthase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978968|gb|EFW10496.1| thymidylate synthase [Actinomyces sp. oral taxon 178 str. F0338] Length = 265 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 148/263 (56%), Positives = 186/263 (70%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY DLL V+ G + DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KSVV ELLW Sbjct: 4 RQYEDLLARVMAEGVAKGDRTGTGTRSVFGAQLRYDLSRGFPLITTKRVHLKSVVGELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL G SNV +L HG+ IW+EWAD+ GELGP+YGVQWRSW G IDQIS+++++LR Sbjct: 64 FLSGSSNVGWLQEHGIRIWNEWADEGGELGPVYGVQWRSWNAGGGTRIDQISNVLETLRT 123 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV + +MAL PCH FQ Y +G+LS QLYQRS D+FLG+PFNIASY Sbjct: 124 DPDSRRMVVSAWNVGDLPQMALEPCHAFFQLYAAHGRLSLQLYQRSADLFLGVPFNIASY 183 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 SLLT M A G Q G+FI T GD H+Y+NH EQ QLSR P P++ + + Sbjct: 184 SLLTHMFAQQAGLQVGDFIWTGGDCHIYSNHTEQVAEQLSREPYPFPRLELA-KAPSMFD 242 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + ++D ++ Y+ H I A V+V Sbjct: 243 YSFDDVSVEGYQHHPTIKAPVAV 265 >gi|242068437|ref|XP_002449495.1| hypothetical protein SORBIDRAFT_05g016730 [Sorghum bicolor] gi|241935338|gb|EES08483.1| hypothetical protein SORBIDRAFT_05g016730 [Sorghum bicolor] Length = 521 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L+ +I+ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW Sbjct: 239 YQYLNLVEDIIRSGAQKNDRTGTGTMSKFGCQMRFNLRKNFPLLTTKRVFWRGVVEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F+ G +N L G+ IWD ++G+LGP+YG QWR + Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + + KMALPPCH QFYV+NG+LSC Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIIMSAWNPSDLKKMALPPCHMFAQFYVENGELSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G+F+H +GD H+Y H + Q+ Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRTHVRALEEQIQ 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP+ D+ SF DF L Y+PH I K++V Sbjct: 479 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKIEMKMAV 521 >gi|229017549|ref|ZP_04174449.1| Thymidylate synthase [Bacillus cereus AH1273] gi|229023767|ref|ZP_04180256.1| Thymidylate synthase [Bacillus cereus AH1272] gi|228737564|gb|EEL88071.1| Thymidylate synthase [Bacillus cereus AH1272] gi|228743774|gb|EEL93876.1| Thymidylate synthase [Bacillus cereus AH1273] Length = 318 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ YL +H +IW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE++ K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKSVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|308048436|ref|YP_003912002.1| thymidylate synthase [Ferrimonas balearica DSM 9799] gi|307630626|gb|ADN74928.1| thymidylate synthase [Ferrimonas balearica DSM 9799] Length = 277 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 155/277 (55%), Positives = 188/277 (67%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL HV+ G DR DRTG GTRS FG+QMRFDL +GFP+LTTKK+HWKS+VHE+L Sbjct: 1 MKAYLDLLNHVMTNGVDRDDRTGTGTRSVFGHQMRFDLGEGFPMLTTKKLHWKSIVHEML 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV YL +GV IW+EWA ++GELGP+YGVQWR W DG IDQI+ +++ L+ Sbjct: 61 WFLSGDTNVRYLQENGVRIWNEWATEEGELGPVYGVQWRHWKTPDGQEIDQIAKVIEDLK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWN A + KMAL PCH QFYV NGKLSC L QRS Sbjct: 121 VRPNSRRIIVSAWNPADLPDETCSPAANAEAGKMALAPCHAFIQFYVANGKLSCMLTQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+ FNI SY+LLT M+A G + GEFI + GDVH+Y NHFEQ QL R P L Sbjct: 181 VDCFLGLAFNIPSYALLTHMVAQQTGLEVGEFIWSGGDVHIYKNHFEQVATQLQRQPGAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I + +R+EDF L Y+ I A V++ Sbjct: 241 PKLEILRRPDSIFDYRFEDFALHDYQAQPHIPAPVAI 277 >gi|262202109|ref|YP_003273317.1| thymidylate synthase [Gordonia bronchialis DSM 43247] gi|262085456|gb|ACY21424.1| thymidylate synthase [Gordonia bronchialis DSM 43247] Length = 270 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 153/261 (58%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL V++ G+ + DRTG GTRS FG+Q+R+DL+ GFPL+TTKKVH KS+++ELLWFL Sbjct: 11 YEDLLALVLETGTPKDDRTGTGTRSLFGHQLRYDLAAGFPLITTKKVHLKSIIYELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L GV+IWDEWAD +GELGP+YGVQWRSWP G IDQI+ ++ LR DP Sbjct: 71 RGDSNVRWLQERGVTIWDEWADDNGELGPVYGVQWRSWPTPSGEHIDQIAGALRLLRTDP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV I +MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 131 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G GEF+ T GD H+Y+NH +Q LQLSR P P++ + + + + Sbjct: 191 LTHMMAQQAGLGVGEFVWTGGDCHIYDNHVDQVRLQLSRDPYPYPKLEL-RHRDSIFGYE 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y H I A V+V Sbjct: 250 FDDIAVVDYRSHPPIKAPVAV 270 >gi|9507217|ref|NP_062052.1| thymidylate synthase [Rattus norvegicus] gi|1174841|sp|P45352|TYSY_RAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|4558189|pdb|1RTS|A Chain A, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|4558190|pdb|1RTS|B Chain B, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|4558226|pdb|2TSR|A Chain A, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|4558227|pdb|2TSR|B Chain B, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|4558228|pdb|2TSR|C Chain C, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|4558229|pdb|2TSR|D Chain D, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex gi|207328|gb|AAA92340.1| thymidylate synthase [Rattus norvegicus] gi|117558487|gb|AAI26094.1| Thymidylate synthetase [Rattus norvegicus] gi|149036310|gb|EDL90969.1| thymidylate synthase [Rattus norvegicus] gi|1095492|prf||2109225A thymidylate synthase Length = 307 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 26 QYLRQVEHIMRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 86 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGADYKDMDS 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 266 EPRPFPKLRILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307 >gi|13096425|pdb|1HW4|A Chain A, Structure Of Thymidylate Synthase Suggests Advantages Of Chemotherapy With Noncompetitive Inhibitors Length = 355 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 74 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 133 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 134 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 193 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 194 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPCHALXQFYVVNSELSCQ 253 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 254 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 313 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 314 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 355 >gi|229190322|ref|ZP_04317323.1| Thymidylate synthase [Bacillus cereus ATCC 10876] gi|228593106|gb|EEK50924.1| Thymidylate synthase [Bacillus cereus ATCC 10876] Length = 318 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ YL +H +IW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE+++K G LG +YG QWRSW G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRSWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|219111327|ref|XP_002177415.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411950|gb|EEC51878.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 495 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 132/284 (46%), Positives = 178/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYLDL RH++ G R DRTG GT S FG QMRF L G PLLTTK+V W+ V ELL Sbjct: 212 RQYLDLCRHILDHGVRRGDRTGTGTLSQFGTQMRFSLRDGTLPLLTTKRVFWRGVAEELL 271 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+ G++N + L + IWD +D G+LGP+YG QWR + Sbjct: 272 WFVAGNTNANDLAAKDIRIWDGNGSRDFLDSRGLGHREVGDLGPVYGFQWRHFGATYGTM 331 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ++ + ++ +P RR I+SAWN A ++ MALPPCH QFYV LS Sbjct: 332 HDDYTGKGVDQLAECIDKIKNNPEDRRIILSAWNPADLELMALPPCHMFCQFYVRTASLS 391 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH + QL Sbjct: 392 CQMYQRSADMGLGVPFNIASYALLTHMIAHVTGRKPGDFVHTIGDAHVYLNHVDALQTQL 451 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++ INP+ ++ F + DFT+ Y+PH I +++V Sbjct: 452 ERTPRAFPKLQINPDKQNIDDFVFADFTVVGYQPHKTIKMEMAV 495 >gi|306774132|ref|NP_001182436.1| thymidylate synthase [Macaca mulatta] Length = 313 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRGEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|23466213|ref|NP_696816.1| thymidylate synthase [Bifidobacterium longum NCC2705] gi|239621560|ref|ZP_04664591.1| thymidylate synthase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|62901377|sp|Q8G3T9|TYSY_BIFLO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|23326956|gb|AAN25452.1| thymidylate synthase [Bifidobacterium longum NCC2705] gi|239515435|gb|EEQ55302.1| thymidylate synthase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 266 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 150/265 (56%), Positives = 188/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL Sbjct: 3 YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 62 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP IDQIS+++ + Sbjct: 63 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++KMALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIA Sbjct: 123 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADDKLSCQLYQRSCDMFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH +Q QL R P P + I L Sbjct: 183 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEI-RKADSL 241 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 242 FDYQYEDFKVVGYQHHPTIKAPVAV 266 >gi|293610254|ref|ZP_06692555.1| thymidylate synthase [Acinetobacter sp. SH024] gi|292827486|gb|EFF85850.1| thymidylate synthase [Acinetobacter sp. SH024] Length = 280 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + VSIWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQARLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + DL F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEVKDLFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|229196462|ref|ZP_04323208.1| Thymidylate synthase [Bacillus cereus m1293] gi|228587032|gb|EEK45104.1| Thymidylate synthase [Bacillus cereus m1293] Length = 318 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 151/313 (48%), Positives = 199/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESEEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++I+NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLILNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|163940030|ref|YP_001644914.1| thymidylate synthase [Bacillus weihenstephanensis KBAB4] gi|163862227|gb|ABY43286.1| Thymidylate synthase [Bacillus weihenstephanensis KBAB4] Length = 318 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ YL +H +IW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE++ K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|14277914|pdb|1HZW|A Chain A, Crystal Structure Of Human Thymidylate Synthase gi|14277915|pdb|1HZW|B Chain B, Crystal Structure Of Human Thymidylate Synthase gi|14277916|pdb|1I00|A Chain A, Crystal Structure Of Human Thymidylate Synthase, Ternary Complex With Dump And Tomudex gi|14277917|pdb|1I00|B Chain B, Crystal Structure Of Human Thymidylate Synthase, Ternary Complex With Dump And Tomudex Length = 290 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 9 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 68 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 69 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 128 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 129 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 188 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 189 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 248 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 249 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 290 >gi|307826303|ref|ZP_07656510.1| thymidylate synthase [Methylobacter tundripaludum SV96] gi|307732659|gb|EFO03529.1| thymidylate synthase [Methylobacter tundripaludum SV96] Length = 277 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 152/277 (54%), Positives = 199/277 (71%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL ++I+ GS + DRTG GT S FG+QMRF L++GFPL+TTKK+H KS+++EL+ Sbjct: 1 MKPYLQLLDNIIQQGSPKGDRTGSGTLSIFGHQMRFPLAEGFPLVTTKKIHLKSIIYELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+S+LH++ V+IW+EWAD++GELGP+YG QWRSWP DG IDQI +++ L+ Sbjct: 61 WFLKGETNLSFLHQYNVNIWNEWADQNGELGPVYGHQWRSWPTPDGRHIDQIQQVIEQLK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWNVA + KMAL PCH FQFYV +GKLSCQLYQRS Sbjct: 121 NTPNSRRIIVSAWNVADLPDESISPQQNVALGKMALAPCHAFFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASY+LLT M+A + G+F+ T GDVHLY NH +QA+LQL+R P L Sbjct: 181 CDTFLGLPFNIASYALLTHMVAQQCDLEVGDFVWTGGDVHLYLNHQQQANLQLTRKPYAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF + Y+ H I A +SV Sbjct: 241 PTLRIKRRPESIFDYQYEDFEVIDYQAHEHIKAPISV 277 >gi|240129500|gb|ACS44779.1| thymidylate synthase [Litopenaeus vannamei] Length = 289 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 135/284 (47%), Positives = 184/284 (64%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLDL+R +++ G+ + DRTG GT S FG QMR+ L G FPLLTTK+V W+ V ELL Sbjct: 6 YQYLDLIRQIMRTGNRKGDRTGTGTISMFGAQMRYSLRDGIFPLLTTKRVFWRGVAEELL 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+RG +N L + IWD + K+ G+LGP+YG QWR + Sbjct: 66 WFVRGSTNAKELQEKDIHIWDGNSSKEFLNKMGFHDREEGDLGPVYGFQWRHFGAPYADM 125 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+ ++ +++ +P RR I+ AWN + KMALPPCHCL QFYV NG+LS Sbjct: 126 HTDYTGQGVDQLQQVIDTIKNNPDDRRIIMCAWNPVDVPKMALPPCHCLCQFYVANGELS 185 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V + G+F+HTLGD H+Y+NH E + QL Sbjct: 186 CQLYQRSADMGLGVPFNIASYALLTYMIAHVTDLKPGDFVHTLGDAHVYSNHCEALEEQL 245 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I + ++ F++EDF L Y+PH I +++V Sbjct: 246 KREPRPFPSLKIKRKVENISDFKFEDFELDGYKPHPKIKMEMAV 289 >gi|62898305|dbj|BAD97092.1| thymidylate synthetase variant [Homo sapiens] Length = 313 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PF+IASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFDIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|290560115|pdb|3GG5|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560116|pdb|3GG5|B Chain B, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560117|pdb|3GG5|C Chain C, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability gi|290560118|pdb|3GG5|D Chain D, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|229161214|ref|ZP_04289201.1| Thymidylate synthase [Bacillus cereus R309803] gi|228622310|gb|EEK79149.1| Thymidylate synthase [Bacillus cereus R309803] Length = 318 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|171914370|ref|ZP_02929840.1| thymidylate synthase [Verrucomicrobium spinosum DSM 4136] Length = 264 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 164/264 (62%), Positives = 211/264 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +Y LL+ V++ G+ R+DRTGVG S FG Q R+DLS GFP+LTTKK+H +S++HELL Sbjct: 1 MLEYQRLLKKVLEHGNFRQDRTGVGAYSVFGEQSRYDLSAGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YLH + V+IWDEWAD++G LGP+YG QWR W DG V DQI+ ++ S++ Sbjct: 61 WFLKGDTNIKYLHENKVTIWDEWADEEGNLGPVYGAQWRRWQGADGLVHDQIADVIASIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +PYSRRHIVSAWNVA I +MALPPCH +FQF+VD G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPYSRRHIVSAWNVARIGEMALPPCHLMFQFFVDQGRLSCQLYQRSADLFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLTMM+A V Q GEF+HT GD+HLY NH +QA LQL R PR+LP M INP + D+ Sbjct: 181 YALLTMMVAQVCDLQPGEFVHTFGDLHLYANHLDQARLQLEREPRSLPVMKINPEVRDID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F++EDFTL +Y+P AI A+++V Sbjct: 241 GFKFEDFTLENYDPWPAIKAEIAV 264 >gi|290560120|pdb|3GH2|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|169634445|ref|YP_001708181.1| thymidylate synthase [Acinetobacter baumannii SDF] gi|169153237|emb|CAP02337.1| thymidylate synthase (TS) (TSase) [Acinetobacter baumannii] Length = 280 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + V+IWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD+HLY NHFEQA LQL R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDIHLYANHFEQAKLQLMREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP++ D+ F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|121605666|ref|YP_982995.1| thymidylate synthase [Polaromonas naphthalenivorans CJ2] gi|166231723|sp|A1VQZ6|TYSY_POLNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120594635|gb|ABM38074.1| thymidylate synthase [Polaromonas naphthalenivorans CJ2] Length = 276 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 154/270 (57%), Positives = 193/270 (71%), Gaps = 7/270 (2%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DL+R V G+ + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH KS++ ELLW Sbjct: 7 HQYEDLMRLVATQGAFKADRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLKSIIQELLW 66 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL G S+ +L GV+IW+EWA DG+LGP+YGVQWRSWP DG IDQI+ ++++L+ Sbjct: 67 FLTGSSSNHWLTERGVTIWNEWARADGDLGPVYGVQWRSWPTPDGGHIDQIAEVIKTLKT 126 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGI 174 +P SRR IVSAWNVA +DKMAL PCH LFQFYV GKLSCQLYQRS D+FLG+ Sbjct: 127 NPDSRRIIVSAWNVADLDKMALMPCHALFQFYVAPATEAGGKGKLSCQLYQRSADIFLGV 186 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT M+A G+FI T GD H+Y+NH EQ LQL R+P P + I Sbjct: 187 PFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHQEQVALQLGRAPFAYPLLHIRR 246 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +++EDF Y+ H AI A V+V Sbjct: 247 KPDSIFDYQFEDFEFLDYQHHPAIKAPVAV 276 >gi|227832620|ref|YP_002834327.1| Thymidylate synthase [Corynebacterium aurimucosum ATCC 700975] gi|262182896|ref|ZP_06042317.1| thymidylate synthase [Corynebacterium aurimucosum ATCC 700975] gi|254790235|sp|C3PEY5|TYSY_CORA7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|227453636|gb|ACP32389.1| Thymidylate synthase [Corynebacterium aurimucosum ATCC 700975] Length = 268 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 149/261 (57%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GT S FG Q+R++L++ FPLLTTKKV++ V+ ELLWFL Sbjct: 9 YEDLLRRVLEEGAPKGDRTGTGTLSLFGAQLRYNLAESFPLLTTKKVYFHGVIGELLWFL 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L + V IW+EWAD+DGELGP+YGVQWRSWP DG IDQI + +L+ +P Sbjct: 69 RGDSNVKWLQENKVRIWNEWADEDGELGPVYGVQWRSWPTPDGQHIDQIQVALDTLKNNP 128 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNV+ +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFN+ASY+ Sbjct: 129 DSRRNLVSAWNVSELDKMALMPCHLLFQLYVADGKLSMQVYQRSADMFLGVPFNLASYAA 188 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GE I T GD H+YN+H EQ QLSR PR PQ+ ++ L + Sbjct: 189 LTHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSRQPREYPQLKLH-KAESLFDYD 247 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++DF + Y+PH I A+VSV Sbjct: 248 FDDFEVIGYDPHPTIKAQVSV 268 >gi|30020325|ref|NP_831956.1| thymidylate synthase [Bacillus cereus ATCC 14579] gi|206972712|ref|ZP_03233650.1| thymidylate synthase [Bacillus cereus AH1134] gi|218231958|ref|YP_002366936.1| thymidylate synthase [Bacillus cereus B4264] gi|228952578|ref|ZP_04114654.1| Thymidylate synthase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228958506|ref|ZP_04120226.1| Thymidylate synthase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229043979|ref|ZP_04191671.1| Thymidylate synthase [Bacillus cereus AH676] gi|229069766|ref|ZP_04203051.1| Thymidylate synthase [Bacillus cereus F65185] gi|229091229|ref|ZP_04222449.1| Thymidylate synthase [Bacillus cereus Rock3-42] gi|229109679|ref|ZP_04239265.1| Thymidylate synthase [Bacillus cereus Rock1-15] gi|229127635|ref|ZP_04256624.1| Thymidylate synthase [Bacillus cereus BDRD-Cer4] gi|229144831|ref|ZP_04273228.1| Thymidylate synthase [Bacillus cereus BDRD-ST24] gi|229178605|ref|ZP_04305969.1| Thymidylate synthase [Bacillus cereus 172560W] gi|296502804|ref|YP_003664504.1| thymidylate synthase [Bacillus thuringiensis BMB171] gi|33301701|sp|Q81E05|TYSY_BACCR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|29895876|gb|AAP09157.1| Thymidylate synthase [Bacillus cereus ATCC 14579] gi|206732367|gb|EDZ49551.1| thymidylate synthase [Bacillus cereus AH1134] gi|218159915|gb|ACK59907.1| thymidylate synthase [Bacillus cereus B4264] gi|228604763|gb|EEK62220.1| Thymidylate synthase [Bacillus cereus 172560W] gi|228638553|gb|EEK94986.1| Thymidylate synthase [Bacillus cereus BDRD-ST24] gi|228655712|gb|EEL11561.1| Thymidylate synthase [Bacillus cereus BDRD-Cer4] gi|228673720|gb|EEL28978.1| Thymidylate synthase [Bacillus cereus Rock1-15] gi|228692127|gb|EEL45866.1| Thymidylate synthase [Bacillus cereus Rock3-42] gi|228713387|gb|EEL65277.1| Thymidylate synthase [Bacillus cereus F65185] gi|228725361|gb|EEL76626.1| Thymidylate synthase [Bacillus cereus AH676] gi|228801133|gb|EEM48030.1| Thymidylate synthase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228807044|gb|EEM53587.1| Thymidylate synthase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|296323856|gb|ADH06784.1| thymidylate synthase [Bacillus thuringiensis BMB171] Length = 318 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ YL +H +IW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE+++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|297798456|ref|XP_002867112.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297312948|gb|EFH43371.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 565 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 129/281 (45%), Positives = 173/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 285 YLNLVKEIISNGNLKGDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 344 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G +N L G+ IWD A ++G+LGP+YG QWR + D Sbjct: 345 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 404 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV +G+LSCQ+ Sbjct: 405 YTGQGFDQLLDVIHKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVADGELSCQM 464 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT +LA V G+FIH +GD H+Y NH QL Sbjct: 465 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 524 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + I P D+ SF +DF L Y+PH I K++V Sbjct: 525 PKPFPVLKIKPEKKDIDSFVSDDFELIGYDPHKKIDMKMAV 565 >gi|227548298|ref|ZP_03978347.1| thymidylate synthase [Corynebacterium lipophiloflavum DSM 44291] gi|227079616|gb|EEI17579.1| thymidylate synthase [Corynebacterium lipophiloflavum DSM 44291] Length = 266 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 155/261 (59%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ GS + DRTG GT S FG Q+R+DLS+ FPLLTTKKV++K VV ELLWFL Sbjct: 7 YEDLLRDILENGSPKGDRTGTGTLSVFGRQLRYDLSQSFPLLTTKKVYFKGVVGELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L + + IW+EWAD+DGELGP+YGVQWRSWP DG IDQIS ++ LR DP Sbjct: 67 RGESNVRWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISESLRLLREDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNV+ +DKMAL PCH LFQ YV +G+LS Q+YQRS D+FLG+PFNIASYSL Sbjct: 127 ESRRNLVSAWNVSELDKMALMPCHLLFQLYVADGRLSMQVYQRSADMFLGVPFNIASYSL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT+M A G GE I T GD H+YNNH EQ QLSR PR PQ+ + L + Sbjct: 187 LTLMFAQQAGLTVGELIWTGGDCHIYNNHIEQVKEQLSREPRPYPQLEL-RKAPSLFEYS 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y+PH I A+V+V Sbjct: 246 FDDIKVVGYDPHPTITAEVAV 266 >gi|228997327|ref|ZP_04156949.1| Thymidylate synthase [Bacillus mycoides Rock3-17] gi|229004952|ref|ZP_04162679.1| Thymidylate synthase [Bacillus mycoides Rock1-4] gi|228756300|gb|EEM05618.1| Thymidylate synthase [Bacillus mycoides Rock1-4] gi|228762419|gb|EEM11344.1| Thymidylate synthase [Bacillus mycoides Rock3-17] Length = 318 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL ++ +IW+EWA Sbjct: 66 FMKGDTNIRYLLQNNNNIWNEWAFKSWVESDAYEGPDMTDFGLRSQQDEEFKKQYDEQMD 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++ G LG +YG QWR+W G IDQ+ +++ ++ P SRR +VS Sbjct: 126 LFKKNVLEDDDFANQYGYLGDVYGKQWRAWKTTAGETIDQLKDVIEMIKKTPDSRRLLVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P + +NP++ + F ED TL Sbjct: 246 CGLEAGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSVFDFEMEDLTLEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229059909|ref|ZP_04197284.1| Thymidylate synthase [Bacillus cereus AH603] gi|228719454|gb|EEL71057.1| Thymidylate synthase [Bacillus cereus AH603] Length = 318 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ YL +H +IW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKRYDEQME 125 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE++ K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|212212099|ref|YP_002303035.1| thymidylate synthase [Coxiella burnetii CbuG_Q212] gi|212010509|gb|ACJ17890.1| thymidylate synthase [Coxiella burnetii CbuG_Q212] Length = 264 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 149/264 (56%), Positives = 200/264 (75%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+ ++ G + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL Sbjct: 1 MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W DG +DQ+ +++ ++ Sbjct: 61 WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT ++A + GEFI + GD H+YN H +Q QLSR PR LPQ+IIN + L Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + + DF++ +Y PH AI A V+V Sbjct: 241 DYNFNDFSIVNYHPHLAIKAPVAV 264 >gi|289195|gb|AAA32789.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|3096926|emb|CAA18836.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|7270407|emb|CAB80174.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|27808622|gb|AAO24591.1| At4g34570 [Arabidopsis thaliana] Length = 518 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 131/281 (46%), Positives = 174/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 238 YLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 297 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G +N L G+ IWD A ++G+LGP+YG QWR + D Sbjct: 298 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 357 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 358 YTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 417 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT +LA V G+FIH +GD H+Y NH QL Sbjct: 418 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 477 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP D+ SF +DF L Y+PH I K++V Sbjct: 478 PKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 518 >gi|118465321|ref|YP_882829.1| thymidylate synthase [Mycobacterium avium 104] gi|254776088|ref|ZP_05217604.1| thymidylate synthase [Mycobacterium avium subsp. avium ATCC 25291] gi|166231711|sp|A0QIU1|TYSY_MYCA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|118166608|gb|ABK67505.1| thymidylate synthase [Mycobacterium avium 104] Length = 266 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 164/261 (62%), Positives = 199/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH KSVV+ELLWFL Sbjct: 7 YEDLLRLVLDRGTAKSDRTGTGTRSLFGQQLRYDLSAGFPLITTKKVHLKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +LHRHGV+IWDEWA G+LGPIYGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNVDWLHRHGVTIWDEWASDTGDLGPIYGVQWRSWPTPSGEHIDQISAALDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGEIPRMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ LQLSR PR P++++ + + + Sbjct: 187 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELVLA-HRDSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y+D + +Y+PH AI A V+V Sbjct: 246 YDDVVVHNYDPHPAIKAPVAV 266 >gi|88706383|ref|ZP_01104088.1| Thymidylate synthase [Congregibacter litoralis KT71] gi|88699319|gb|EAQ96433.1| Thymidylate synthase [Congregibacter litoralis KT71] Length = 277 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 145/277 (52%), Positives = 182/277 (65%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLR +++ G + DRTG GT S FG Q R +L+ GFPLLTTKKVH +S+++EL+ Sbjct: 1 MRQYHDLLRDILENGVRKEDRTGTGTLSVFGRQFRHNLADGFPLLTTKKVHLRSIINELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV++L HGVSIW+EWA + G+LGP+YG QWR+WP DG +DQI ++ LR Sbjct: 61 WFLNGDTNVAWLQEHGVSIWNEWATETGDLGPVYGKQWRAWPTQDGGEVDQIEYVLDCLR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR + AWNV + MALPPCH L+QFYV GKLS QLY RS Sbjct: 121 HRPDSRRILFHAWNVEYLPDESLSPQENARAGRMALPPCHLLYQFYVAEGKLSAQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFN+AS ++L MMLA + GE + + GD HLY NH EQ QLSR PR L Sbjct: 181 SDSFLGLPFNMASLAVLVMMLAQQADLEPGEIVVSTGDSHLYLNHMEQVQEQLSREPRPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + +R+EDF L Y PH AI A V+V Sbjct: 241 PTLAILRKPDSIYDYRFEDFELSGYNPHPAIPAPVAV 277 >gi|229085186|ref|ZP_04217431.1| Thymidylate synthase [Bacillus cereus Rock3-44] gi|228698123|gb|EEL50863.1| Thymidylate synthase [Bacillus cereus Rock3-44] Length = 318 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 151/313 (48%), Positives = 196/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL ++ +IW+EWA K+ Sbjct: 66 FMKGDTNIRYLLQNNNNIWNEWAFKNWVESDAYEGPDMTDFGLRSQQDEEFKAQYDEQME 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR+W G IDQ+ +++ ++ P SRR +VS Sbjct: 126 LFKKNVLENDAFANQYGYLGDVYGKQWRAWKTTVGETIDQLKDVIEMIKKTPDSRRLLVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P + +NP++ F ED TL Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSAFDFEMEDLTLEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|164564740|dbj|BAF98221.1| CM0216.390.nc [Lotus japonicus] Length = 528 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 132/283 (46%), Positives = 175/283 (61%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL L++ +I G+ + DRTG GT S FG QMRF+L + FPLLTTKKV W+ VV ELLW Sbjct: 246 YKYLRLVQEIISEGTVKDDRTGTGTLSKFGCQMRFNLRRSFPLLTTKKVFWRGVVEELLW 305 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G ++ L G+ IWD A ++G+LGP+YG QWR + Sbjct: 306 FISGSTSAKVLQEKGIHIWDGNASREYLDSIGLTEREEGDLGPVYGFQWRHFGARYTNMH 365 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV NG+LSC Sbjct: 366 DDYSGKGFDQLLDVINKIKHNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSC 425 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT M+A V G+FIH +GD H+Y NH + QL Sbjct: 426 QMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVKPLQEQLQ 485 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P + INP D+ SF DF L Y+PH I K++V Sbjct: 486 NLPRPFPILKINPKKKDIDSFEATDFKLIGYDPHQKIQMKMAV 528 >gi|325124433|gb|ADY83956.1| thyA; thymidylate synthase (Ts) (TSase) [Acinetobacter calcoaceticus PHEA-2] Length = 280 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + VSIWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR I+S WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I DL F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEIKDLFDFKFEDIEIVGYESHPAIKAPVAV 280 >gi|86141845|ref|ZP_01060369.1| thymidylate synthase [Leeuwenhoekiella blandensis MED217] gi|85831408|gb|EAQ49864.1| thymidylate synthase [Leeuwenhoekiella blandensis MED217] Length = 283 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 157/286 (54%), Positives = 204/286 (71%), Gaps = 25/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++H++ G+ + DRTG GT S FGYQMRFDLS+GFP++TTKK+H KS+++ELL Sbjct: 1 MQQYHDLVKHILNNGAQKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL HGV IW+EWAD+DG LGP+YG QWR+W + IDQI +++SL+ Sbjct: 61 WFLKGDTNIEYLKEHGVRIWNEWADEDGNLGPVYGHQWRNW---NSEEIDQIKEVIESLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNG---------K 158 +P SRR +VSAWN +++ K ALPPCH FQFYV G K Sbjct: 118 NNPNSRRMLVSAWNPSVMPDTSKSFAENVANGKAALPPCHAFFQFYVAPGDPEAEDKRPK 177 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQLYQRS DVFLG+PFNIASY+L TMM+A V + G+FIHT GD H+YNNH EQ +L Sbjct: 178 LSCQLYQRSADVFLGVPFNIASYALFTMMMAQVCDYAPGDFIHTFGDAHIYNNHIEQLNL 237 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL+R R LP M +NP + D+ SF ++DF L +Y+PH I KV++ Sbjct: 238 QLTREIRKLPTMTLNPEVKDIFSFSFDDFKLENYDPHPHIKGKVAI 283 >gi|262380134|ref|ZP_06073289.1| thymidylate synthase [Acinetobacter radioresistens SH164] gi|262298328|gb|EEY86242.1| thymidylate synthase [Acinetobacter radioresistens SH164] Length = 280 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 160/280 (57%), Positives = 203/280 (72%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+H+++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRQYLDLLQHILEHGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP---DYDG-- 106 WFL+GD+NV YL + V+IWDEWA + GELGP+YG QWR++ + DG Sbjct: 61 WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPAGELGPVYGHQWRNFGATQNEDGSY 120 Query: 107 --NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 N +DQIS ++ ++ +P SRR IVS WN ++ALPPCH LFQF+V NGKLSCQLY Sbjct: 121 QKNGVDQISWLINEIKTNPNSRRLIVSGWNPKEASQVALPPCHTLFQFFVQNGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V Q G+F+ T GD HLY NHF+QA LQL R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLQVGDFVWTGGDTHLYANHFDQARLQLGRDP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + + F++ED + +Y H+AI A V+V Sbjct: 241 LELCQLKLNPEVKSIFDFKFEDIEIINYHSHSAIKAPVAV 280 >gi|30262250|ref|NP_844627.1| thymidylate synthase [Bacillus anthracis str. Ames] gi|47527532|ref|YP_018881.1| thymidylate synthase [Bacillus anthracis str. 'Ames Ancestor'] gi|49185093|ref|YP_028345.1| thymidylate synthase [Bacillus anthracis str. Sterne] gi|49477562|ref|YP_036349.1| thymidylate synthase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65319542|ref|ZP_00392501.1| COG0207: Thymidylate synthase [Bacillus anthracis str. A2012] gi|118477668|ref|YP_894819.1| thymidylate synthase [Bacillus thuringiensis str. Al Hakam] gi|165872246|ref|ZP_02216884.1| thymidylate synthase [Bacillus anthracis str. A0488] gi|167633020|ref|ZP_02391346.1| thymidylate synthase [Bacillus anthracis str. A0442] gi|167641064|ref|ZP_02399320.1| thymidylate synthase [Bacillus anthracis str. A0193] gi|170686448|ref|ZP_02877669.1| thymidylate synthase [Bacillus anthracis str. A0465] gi|170708449|ref|ZP_02898892.1| thymidylate synthase [Bacillus anthracis str. A0389] gi|177650834|ref|ZP_02933731.1| thymidylate synthase [Bacillus anthracis str. A0174] gi|190567905|ref|ZP_03020816.1| thymidylate synthase [Bacillus anthracis Tsiankovskii-I] gi|196033812|ref|ZP_03101223.1| thymidylate synthase [Bacillus cereus W] gi|196042313|ref|ZP_03109590.1| thymidylate synthase [Bacillus cereus NVH0597-99] gi|196046931|ref|ZP_03114152.1| thymidylate synthase [Bacillus cereus 03BB108] gi|218903379|ref|YP_002451213.1| thymidylate synthase [Bacillus cereus AH820] gi|225864217|ref|YP_002749595.1| thymidylate synthase [Bacillus cereus 03BB102] gi|227814947|ref|YP_002814956.1| thymidylate synthase [Bacillus anthracis str. CDC 684] gi|228914838|ref|ZP_04078446.1| Thymidylate synthase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228927305|ref|ZP_04090366.1| Thymidylate synthase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228945857|ref|ZP_04108201.1| Thymidylate synthase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229121792|ref|ZP_04251013.1| Thymidylate synthase [Bacillus cereus 95/8201] gi|229184465|ref|ZP_04311670.1| Thymidylate synthase [Bacillus cereus BGSC 6E1] gi|229604628|ref|YP_002866591.1| thymidylate synthase [Bacillus anthracis str. A0248] gi|254684819|ref|ZP_05148679.1| thymidylate synthase [Bacillus anthracis str. CNEVA-9066] gi|254722227|ref|ZP_05184015.1| thymidylate synthase [Bacillus anthracis str. A1055] gi|254737265|ref|ZP_05194969.1| thymidylate synthase [Bacillus anthracis str. Western North America USA6153] gi|254743548|ref|ZP_05201233.1| thymidylate synthase [Bacillus anthracis str. Kruger B] gi|254751581|ref|ZP_05203618.1| thymidylate synthase [Bacillus anthracis str. Vollum] gi|254759096|ref|ZP_05211123.1| thymidylate synthase [Bacillus anthracis str. Australia 94] gi|301053768|ref|YP_003791979.1| thymidylate synthase [Bacillus anthracis CI] gi|33301703|sp|Q81R23|TYSY_BACAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901310|sp|Q6HJC7|TYSY_BACHK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231689|sp|A0RDL9|TYSY_BACAH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|30256881|gb|AAP26113.1| thymidylate synthase [Bacillus anthracis str. Ames] gi|47502680|gb|AAT31356.1| thymidylate synthase [Bacillus anthracis str. 'Ames Ancestor'] gi|49179020|gb|AAT54396.1| thymidylate synthase [Bacillus anthracis str. Sterne] gi|49329118|gb|AAT59764.1| thymidylate synthase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118416893|gb|ABK85312.1| thymidylate synthase [Bacillus thuringiensis str. Al Hakam] gi|164712039|gb|EDR17578.1| thymidylate synthase [Bacillus anthracis str. A0488] gi|167510962|gb|EDR86352.1| thymidylate synthase [Bacillus anthracis str. A0193] gi|167531832|gb|EDR94497.1| thymidylate synthase [Bacillus anthracis str. A0442] gi|170126688|gb|EDS95572.1| thymidylate synthase [Bacillus anthracis str. A0389] gi|170669524|gb|EDT20266.1| thymidylate synthase [Bacillus anthracis str. A0465] gi|172083295|gb|EDT68356.1| thymidylate synthase [Bacillus anthracis str. A0174] gi|190560960|gb|EDV14934.1| thymidylate synthase [Bacillus anthracis Tsiankovskii-I] gi|195993492|gb|EDX57449.1| thymidylate synthase [Bacillus cereus W] gi|196022306|gb|EDX60992.1| thymidylate synthase [Bacillus cereus 03BB108] gi|196026858|gb|EDX65488.1| thymidylate synthase [Bacillus cereus NVH0597-99] gi|218539044|gb|ACK91442.1| thymidylate synthase [Bacillus cereus AH820] gi|225789076|gb|ACO29293.1| thymidylate synthase [Bacillus cereus 03BB102] gi|227004156|gb|ACP13899.1| thymidylate synthase [Bacillus anthracis str. CDC 684] gi|228599009|gb|EEK56624.1| Thymidylate synthase [Bacillus cereus BGSC 6E1] gi|228661708|gb|EEL17327.1| Thymidylate synthase [Bacillus cereus 95/8201] gi|228813839|gb|EEM60116.1| Thymidylate synthase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228832381|gb|EEM77957.1| Thymidylate synthase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228844809|gb|EEM89852.1| Thymidylate synthase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229269036|gb|ACQ50673.1| thymidylate synthase [Bacillus anthracis str. A0248] gi|300375937|gb|ADK04841.1| thymidylate synthase [Bacillus cereus biovar anthracis str. CI] Length = 318 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ YL +H +IW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMIDFGLRSQQDEEFKVQYDEQME 125 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE+++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|259418355|ref|ZP_05742273.1| thymidylate synthase [Silicibacter sp. TrichCH4B] gi|259345750|gb|EEW57594.1| thymidylate synthase [Silicibacter sp. TrichCH4B] Length = 277 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 150/277 (54%), Positives = 194/277 (70%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D L+H++ G + DRTG GT S FG Q R+DL+ GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYHDALQHILDHGVETTDRTGTGTLSCFGMQQRYDLADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P Y Sbjct: 61 WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGYQWRKFPRLELAEGTLGDEPLYRAG 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQIS +V+ +R P SRR IV+AWN A + MALPPCH L+Q V GK+ QLYQRS Sbjct: 121 TVDQISDLVKMIRNSPDSRRLIVTAWNPADVPDMALPPCHSLWQVRVLGGKMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LL MLA V G++ G F+HT+GD H+Y+NH EQ LQLSR+P+ L Sbjct: 181 ADMFLGVPFNIASYALLLQMLAHVTGYEIGTFVHTMGDAHIYSNHMEQVKLQLSRTPKQL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+ I N+ L F+YEDF + Y+P I A V+V Sbjct: 241 PQIRIARNVTSLFDFKYEDFEVIGYDPDPTIKAPVAV 277 >gi|296129374|ref|YP_003636624.1| thymidylate synthase [Cellulomonas flavigena DSM 20109] gi|296021189|gb|ADG74425.1| thymidylate synthase [Cellulomonas flavigena DSM 20109] Length = 278 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 140/261 (53%), Positives = 184/261 (70%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG+Q+R+DL GFPL+TTK+V ++ V EL WFL Sbjct: 19 YEDLLRLVLATGTPKSDRTGTGTRSVFGHQLRYDLRAGFPLVTTKRVFFRGVAEELFWFL 78 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SN++ L V IWDEWAD+ GELGP+YGVQWRSWP DG +DQ+ ++ LRA+P Sbjct: 79 RGESNIASLLERNVHIWDEWADEHGELGPVYGVQWRSWPTPDGGHVDQLERLLGELRANP 138 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRRH+VSAWNVA +D+MAL PCH FQ YV +G+LS Q+YQRS D+FLG+PFN+ASY+L Sbjct: 139 DSRRHLVSAWNVAELDRMALVPCHAFFQLYVADGRLSLQVYQRSADLFLGVPFNLASYAL 198 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A +G + G+ + T GD H+Y+NH EQ QLSR P P + + L + Sbjct: 199 LTHMIAQQVGLEVGDLVWTGGDCHIYDNHVEQVREQLSREPYPYPTLEL-REAPSLFDYA 257 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y H I A V+V Sbjct: 258 WDDVEVVGYRHHPTIAAPVAV 278 >gi|158258677|dbj|BAF85309.1| unnamed protein product [Homo sapiens] Length = 313 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRS D+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSRDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|301609223|ref|XP_002934168.1| PREDICTED: thymidylate synthase-like [Xenopus (Silurana) tropicalis] Length = 308 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 27 QYLDQIKHILEHGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 86 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD ++G+LGP+YG QWR + Sbjct: 87 IKGCTNSKELSAKGVKIWDANGSREFLDKQGFSNREEGDLGPVYGFQWRHFGAEYKDTYT 146 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ +++++++ +P RR I+ +WN I MALPPCH L QFYV + +LSCQ Sbjct: 147 DYSGQGVDQLRNVIETIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVIDKELSCQ 206 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E LQL R Sbjct: 207 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHTEPLKLQLQR 266 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + ++ F +DF + Y PH +I +++V Sbjct: 267 TPRPFPKLKILRKVENIDDFTADDFLIEGYNPHPSIKMEMAV 308 >gi|42781330|ref|NP_978577.1| thymidylate synthase [Bacillus cereus ATCC 10987] gi|206978240|ref|ZP_03239119.1| thymidylate synthase [Bacillus cereus H3081.97] gi|217959749|ref|YP_002338301.1| thymidylate synthase [Bacillus cereus AH187] gi|228907968|ref|ZP_04071819.1| Thymidylate synthase [Bacillus thuringiensis IBL 200] gi|228939370|ref|ZP_04101961.1| Thymidylate synthase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972248|ref|ZP_04132862.1| Thymidylate synthase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978863|ref|ZP_04139231.1| Thymidylate synthase [Bacillus thuringiensis Bt407] gi|62901335|sp|Q738X7|TYSY_BACC1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|42737252|gb|AAS41185.1| thymidylate synthase [Bacillus cereus ATCC 10987] gi|206743541|gb|EDZ54969.1| thymidylate synthase [Bacillus cereus H3081.97] gi|217064386|gb|ACJ78636.1| thymidylate synthase [Bacillus cereus AH187] gi|228780885|gb|EEM29095.1| Thymidylate synthase [Bacillus thuringiensis Bt407] gi|228787498|gb|EEM35463.1| Thymidylate synthase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820330|gb|EEM66364.1| Thymidylate synthase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228851727|gb|EEM96530.1| Thymidylate synthase [Bacillus thuringiensis IBL 200] gi|326939942|gb|AEA15838.1| thymidylate synthase [Bacillus thuringiensis serovar chinensis CT-43] Length = 318 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|290560083|pdb|3EAW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALXQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|52143217|ref|YP_083612.1| thymidylate synthase [Bacillus cereus E33L] gi|62901260|sp|Q63BV5|TYSY_BACCZ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|51976686|gb|AAU18236.1| thymidylate synthase [Bacillus cereus E33L] Length = 318 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDKQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|227494604|ref|ZP_03924920.1| thymidylate synthase [Actinomyces coleocanis DSM 15436] gi|226832338|gb|EEH64721.1| thymidylate synthase [Actinomyces coleocanis DSM 15436] Length = 267 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 145/261 (55%), Positives = 190/261 (72%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G+ + DRTG GT S FG Q+R+DLS+GFPL+TTK+VH KSVV EL+WFL Sbjct: 8 YEDLLREVLETGAVKEDRTGTGTVSVFGRQLRYDLSQGFPLITTKRVHLKSVVGELIWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 G SNV +L +G+ IW+EWAD++G+LGP+YGVQWRSWP DG IDQ++ I++++R++P Sbjct: 68 NGSSNVKWLQDNGIRIWNEWADENGDLGPVYGVQWRSWPTPDGEHIDQLTQILETVRSNP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNVA +DKMAL PCH FQ YV +GKLS Q+YQRS D+FLG+PFNIASY+L Sbjct: 128 DSRRMLVSAWNVAELDKMALAPCHSFFQLYVVDGKLSLQIYQRSADLFLGVPFNIASYAL 187 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A Q G+ + T GD H+Y+NHFEQ QLSR P + + L ++ Sbjct: 188 LTHMIAQQCDLQVGDLVWTGGDCHIYSNHFEQVQEQLSRKAYPFPTLEL-RKAESLFDYQ 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ED + Y+ H I A V+V Sbjct: 247 IEDVAVHDYQHHPTIKAPVAV 267 >gi|300932648|ref|ZP_07147904.1| thymidylate synthase [Corynebacterium resistens DSM 45100] Length = 278 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 154/261 (59%), Positives = 199/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR +++ G+ + DRTG GT S FG Q+R+DL +GFPL+TTKKVH KSVV ELLWFL Sbjct: 19 YEDLLREILETGAPKGDRTGTGTSSLFGRQIRYDLQQGFPLITTKKVHVKSVVGELLWFL 78 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +GDSNV +L +G+ IW+EWAD++G+LGP+YGVQWRSWP DG +DQI++ +++L+A+P Sbjct: 79 KGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPDGRHVDQIAAALETLKANP 138 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL Sbjct: 139 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 198 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G GEFI T GD H+Y+NH EQ + QL+R PR P + +N D+ S+ Sbjct: 199 LTHMFAQQAGLDVGEFIWTGGDCHIYDNHREQVETQLTRDPRPYPTLELN-KAADMFSYD 257 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + D Y+PH I A+V+V Sbjct: 258 FSDIHFAGYDPHPTIKAQVAV 278 >gi|41408967|ref|NP_961803.1| thymidylate synthase [Mycobacterium avium subsp. paratuberculosis K-10] gi|62901338|sp|Q73VZ2|TYSY_MYCPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|41397326|gb|AAS05186.1| ThyA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 266 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 165/261 (63%), Positives = 199/261 (76%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH KSVV+ELLWFL Sbjct: 7 YEDLLRLVLDRGTAKSDRTGTGTRSLFGQQLRYDLSAGFPLITTKKVHLKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +LHRHGV+IWDEWA G+LGPIYGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNVDWLHRHGVTIWDEWASDTGDLGPIYGVQWRSWPTPSGEHIDQISAALDLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGEIPRMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ LQLSR PR P++I+ + + + Sbjct: 187 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELILA-HRDSIFDYT 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 Y+D + +Y+PH AI A V+V Sbjct: 246 YDDVVVHNYDPHPAIKAPVAV 266 >gi|229133069|ref|ZP_04261908.1| Thymidylate synthase [Bacillus cereus BDRD-ST196] gi|228650392|gb|EEL06388.1| Thymidylate synthase [Bacillus cereus BDRD-ST196] Length = 318 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLS GFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSNGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229096735|ref|ZP_04227706.1| Thymidylate synthase [Bacillus cereus Rock3-29] gi|229115714|ref|ZP_04245119.1| Thymidylate synthase [Bacillus cereus Rock1-3] gi|228667856|gb|EEL23293.1| Thymidylate synthase [Bacillus cereus Rock1-3] gi|228686941|gb|EEL40848.1| Thymidylate synthase [Bacillus cereus Rock3-29] Length = 318 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQMD 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|126321851|ref|XP_001368094.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Monodelphis domestica] Length = 335 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 132/283 (46%), Positives = 177/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL + H++++GS + DRTG GT S FG Q R++L FPLLTTK+V WK V+ ELLW Sbjct: 53 KQYLQQIEHILQYGSKKNDRTGTGTMSVFGMQARYNLRGEFPLLTTKRVFWKGVLEELLW 112 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+RG +N L GV IWD ++G+LGP+YG QWR + Sbjct: 113 FIRGCTNGKELSAKGVKIWDANGSREFLDNLGLTQREEGDLGPVYGFQWRHFGAEYKEMN 172 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ ++ +P RR I+ AWN + MALPPCH L QFYV NG+LSC Sbjct: 173 TDYSGQGVDQLQKVIDKIKTNPDDRRLIMCAWNPKDLPLMALPPCHALCQFYVANGELSC 232 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFNIASYSLLT M+A + G + G+F+H+LGD H+Y NH E +QL Sbjct: 233 QLYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFVHSLGDAHVYMNHIEPLKIQLQ 292 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I + + F+ EDF + Y PH I ++V Sbjct: 293 REPRPFPKLKILRKVESIDDFKAEDFLIEGYNPHPTIKMDMAV 335 >gi|229102840|ref|ZP_04233535.1| Thymidylate synthase [Bacillus cereus Rock3-28] gi|228680579|gb|EEL34761.1| Thymidylate synthase [Bacillus cereus Rock3-28] Length = 318 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVRYDEQMD 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|300118030|ref|ZP_07055778.1| thymidylate synthase [Bacillus cereus SJ1] gi|298724341|gb|EFI65035.1| thymidylate synthase [Bacillus cereus SJ1] Length = 318 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWIESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|228991229|ref|ZP_04151187.1| Thymidylate synthase [Bacillus pseudomycoides DSM 12442] gi|228768453|gb|EEM17058.1| Thymidylate synthase [Bacillus pseudomycoides DSM 12442] Length = 318 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL ++ +IW+EWA Sbjct: 66 FMKGDTNIRYLLQNNNNIWNEWAFKSWVESDAYEGPDMTDFGLRSQQDEEFKKQYDEQMD 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++ G LG +YG QWR+W G IDQ+ +++ ++ P SRR +VS Sbjct: 126 LFKKNVLEDDDFANQYGYLGDVYGKQWRAWKTTAGETIDQLKDVIEMIKKTPDSRRLLVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P + +NP++ + F +D TL Sbjct: 246 CGLEAGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSVFDFEMDDLTLEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|260783288|ref|XP_002586708.1| hypothetical protein BRAFLDRAFT_77468 [Branchiostoma floridae] gi|229271831|gb|EEN42719.1| hypothetical protein BRAFLDRAFT_77468 [Branchiostoma floridae] Length = 294 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 135/283 (47%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLDL+RH++ G + DRTG GT S FG Q R+ L FPLLTTK+V W+ V ELLW Sbjct: 12 YQYLDLVRHILDCGQRKDDRTGTGTLSVFGAQCRYSLRGQFPLLTTKRVFWRGVAEELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG +N L V IWD +D G+LGP+YG QWR + Sbjct: 72 FVRGCTNGKELSDKKVHIWDANGSRDFLDKRGLSHYEEGDLGPVYGFQWRHFGAEYKDRY 131 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ +++ DP +RR I+SAWN + KMALPPCH QFYV NG+LSC Sbjct: 132 TDYTGQGVDQLAQVIHTIKTDPDNRRIIMSAWNPPDLPKMALPPCHAFVQFYVCNGELSC 191 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD LG+PFNIASYSLLT M+A + G + G+F+HTLGD H+Y NH + QL Sbjct: 192 QLYQRSGDTGLGVPFNIASYSLLTYMIAHITGLKPGDFVHTLGDAHVYVNHVDALKEQLK 251 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I + ++ F+ EDF + Y+PH I +++V Sbjct: 252 REPRPFPTLNIKRQVENIDDFKMEDFEIVGYKPHPKISMEMAV 294 >gi|119713736|gb|ABL97785.1| thymidylate synthase [uncultured marine bacterium HF10_29C11] Length = 257 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 148/257 (57%), Positives = 196/257 (76%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 +RH++ G ++ DRTG GT S FGYQMRFDLS+GFP++TTKK+H +S+VHELLWFL+GD+ Sbjct: 1 MRHILDNGVEKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLRSIVHELLWFLKGDT 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 NV YL +GV IW+EWAD++G+LGP+YG QWR+W DG +IDQ+ ++ ++ +P SRR Sbjct: 61 NVKYLQENGVRIWNEWADENGDLGPVYGKQWRNWEAKDGRIIDQVERAIEQIKNNPNSRR 120 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 IVSAWNV +D+MAL PCH FQF+V +GKL+CQLYQRS DVFLG+PFNIASY+LLT M Sbjct: 121 IIVSAWNVGELDEMALMPCHAFFQFHVADGKLNCQLYQRSADVFLGVPFNIASYALLTHM 180 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A V G + G F+HTLGD HLY NH +QA Q+SR P LP + ++ +I D+ +F +E Sbjct: 181 MAQVCGLEAGTFVHTLGDAHLYMNHLDQAREQISREPLPLPVLKLDQSIADIDAFTFEHI 240 Query: 248 TLRSYEPHAAILAKVSV 264 + YE H I A +SV Sbjct: 241 EIIGYEHHPHISAPISV 257 >gi|229821345|ref|YP_002882871.1| thymidylate synthase [Beutenbergia cavernae DSM 12333] gi|229567258|gb|ACQ81109.1| thymidylate synthase [Beutenbergia cavernae DSM 12333] Length = 275 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 157/262 (59%), Positives = 192/262 (73%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLL V+ G+ + DRTG GTRS FG Q+R+DL FPL+TTK+VH KS+VHELLWF Sbjct: 15 QYEDLLAEVLADGAHKSDRTGTGTRSVFGRQLRYDLRHSFPLVTTKRVHVKSLVHELLWF 74 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRG+SNV YL +GV IW+EWAD DGELGP+YGVQWRSWP DG IDQI+ +V++LR D Sbjct: 75 LRGESNVRYLQENGVRIWNEWADDDGELGPVYGVQWRSWPTPDGGHIDQIARVVENLRTD 134 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRRHIVSAWNVA +D MAL PCH LFQFYV NG+LSCQLYQRS D+FLG+PFN+ASYS Sbjct: 135 PDSRRHIVSAWNVAELDDMALAPCHALFQFYVANGELSCQLYQRSADLFLGVPFNVASYS 194 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A G G+F+ T GD H+Y+NH EQ QL+R P P + + + + Sbjct: 195 LLTHMVAQQTGLAVGDFVWTGGDCHIYDNHTEQVREQLARDPYPFPTLAL-RQAPSIFDY 253 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 Y D + Y+ HA I A ++V Sbjct: 254 AYADVEVVGYQHHAPIAAPIAV 275 >gi|13096294|pdb|1HVY|A Chain A, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation gi|13096295|pdb|1HVY|B Chain B, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation gi|13096296|pdb|1HVY|C Chain C, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation gi|13096297|pdb|1HVY|D Chain D, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation Length = 288 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 7 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 66 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 67 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 126 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 127 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 186 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 187 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 246 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 247 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 288 >gi|262280883|ref|ZP_06058666.1| thymidylate synthase [Acinetobacter calcoaceticus RUH2202] gi|262257783|gb|EEY76518.1| thymidylate synthase [Acinetobacter calcoaceticus RUH2202] Length = 280 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 157/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + VSIWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR I+S WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYVNHFEQAQLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP + DL F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEVKDLFDFKFEDVEIVGYESHPAIKAPVAV 280 >gi|300781716|ref|ZP_07091570.1| thymidylate synthase [Corynebacterium genitalium ATCC 33030] gi|300533423|gb|EFK54484.1| thymidylate synthase [Corynebacterium genitalium ATCC 33030] Length = 274 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 152/261 (58%), Positives = 189/261 (72%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G + DRTG GT S FG Q+R+DLS FPLLTTKKV++K VV ELLWFL Sbjct: 15 YEDLLREILDTGVAKEDRTGTGTVSVFGKQLRYDLSDSFPLLTTKKVYFKGVVGELLWFL 74 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +GDSNV +L +G+ IW+EWA+ +GELGP+YGVQWRSWP DG IDQI + + L+ DP Sbjct: 75 KGDSNVKWLQDNGIRIWNEWANDNGELGPVYGVQWRSWPTPDGQHIDQIQNALDLLKQDP 134 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNV+ +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFNIASYSL Sbjct: 135 ESRRNVVSAWNVSELDKMALMPCHLLFQLYVADGKLSMQVYQRSADMFLGVPFNIASYSL 194 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GE I T GD H+YN+H EQ QLSR PR PQ+ + + + Sbjct: 195 LTHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSREPRPYPQLELA-KAESIFDYG 253 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + Y+PH I AKVSV Sbjct: 254 FDDIAVTGYDPHPTIAAKVSV 274 >gi|226500582|ref|NP_001152378.1| LOC100286018 [Zea mays] gi|195655695|gb|ACG47315.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea mays] Length = 523 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 132/283 (46%), Positives = 180/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L+ +I+FG+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW Sbjct: 241 YQYLNLVEDIIRFGAQKNDRTGTGTLSKFGCQMRFNLRKIFPLLTTKRVFWRGVVEELLW 300 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F+ G +N L G+ IWD ++G+LGP+YG QWR + Sbjct: 301 FISGSTNAKVLQEKGIHIWDGNASREYLDRIGLAHREEGDLGPVYGFQWRHFGAEYTDMH 360 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + + KMALPPCH QFYV+NG+LSC Sbjct: 361 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVENGELSC 420 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G+F+H +GD H+Y NH + Q+ Sbjct: 421 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRNHVRALEEQIQ 480 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP+ D+ SF DF L Y+PH + K++V Sbjct: 481 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKLEMKMAV 523 >gi|228985327|ref|ZP_04145488.1| Thymidylate synthase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229155822|ref|ZP_04283925.1| Thymidylate synthase [Bacillus cereus ATCC 4342] gi|228627666|gb|EEK84390.1| Thymidylate synthase [Bacillus cereus ATCC 4342] gi|228774423|gb|EEM22828.1| Thymidylate synthase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 318 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPELTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229167077|ref|ZP_04294821.1| Thymidylate synthase [Bacillus cereus AH621] gi|228616430|gb|EEK73511.1| Thymidylate synthase [Bacillus cereus AH621] Length = 318 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ YL +H +IW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKQYDEQME 125 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE++ K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR+ P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRSFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|228920949|ref|ZP_04084287.1| Thymidylate synthase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838738|gb|EEM84041.1| Thymidylate synthase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 318 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ YL +H +IW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE+++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CDLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229172934|ref|ZP_04300487.1| Thymidylate synthase [Bacillus cereus MM3] gi|228610557|gb|EEK67826.1| Thymidylate synthase [Bacillus cereus MM3] Length = 318 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 199/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKNWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDNDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A+ Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIANE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQIEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|290560085|pdb|3ED7|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 295 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 14 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 74 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 133 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 134 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 193 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 194 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 253 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 254 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 295 >gi|324326272|gb|ADY21532.1| thymidylate synthase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 318 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKIQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTVGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|229029956|ref|ZP_04186024.1| Thymidylate synthase [Bacillus cereus AH1271] gi|228731383|gb|EEL82297.1| Thymidylate synthase [Bacillus cereus AH1271] Length = 318 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 199/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKIPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A+ Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIANE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|299771659|ref|YP_003733685.1| thymidylate synthase [Acinetobacter sp. DR1] gi|298701747|gb|ADI92312.1| thymidylate synthase [Acinetobacter sp. DR1] Length = 280 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+H++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL Sbjct: 1 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104 WFL+GD+NV YL + VSIWDEWA + ELGP+YG QWR++ Y Sbjct: 61 WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGSY 120 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + + DQI ++ ++ +P SRR I+S WN ++ALPPCH LFQF+V + KLSCQLY Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V G G+F+ T GD HLY NHFEQA LQL+R P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L Q+ +NP I DL F++ED + YE H AI A V+V Sbjct: 241 LPLCQLKLNPEIKDLFDFKFEDVEIVGYESHPAIKAPVAV 280 >gi|311740900|ref|ZP_07714727.1| thymidylate synthase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304420|gb|EFQ80496.1| thymidylate synthase [Corynebacterium pseudogenitalium ATCC 33035] Length = 275 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 148/261 (56%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++ +V+ ELLWFL Sbjct: 16 YEDLLRRVLDKGTPKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHAVLGELLWFL 75 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G+SN+ +L + V IW+EWAD +GELGP+YGVQWRSWP DG IDQI + +L+ +P Sbjct: 76 KGESNIKFLQDNKVRIWNEWADDNGELGPVYGVQWRSWPTPDGQHIDQIQQALDTLKNNP 135 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNVA +DKMAL PCH LFQ YV +G LS Q+YQRS D+FLG+PFNIASY+ Sbjct: 136 DSRRNLVSAWNVAELDKMALMPCHLLFQLYVADGTLSMQVYQRSADMFLGVPFNIASYAA 195 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GE I T GD H+YN+H EQ QLSR PR PQ+ ++ D+ S+ Sbjct: 196 LTHMFAQQAGLKVGELIWTGGDCHIYNDHVEQVKEQLSREPRPYPQLNLH-KAEDMFSYD 254 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + DF + Y+PH I A+VSV Sbjct: 255 FADFEIEGYDPHPTIKAQVSV 275 >gi|329848571|ref|ZP_08263599.1| thymidylate synthase [Asticcacaulis biprosthecum C19] gi|328843634|gb|EGF93203.1| thymidylate synthase [Asticcacaulis biprosthecum C19] Length = 288 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 160/263 (60%), Positives = 203/263 (77%), Gaps = 1/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+LLR ++ G R DRTG GT FG Q+RFDLS+GFPLLTTKKVH+KSV ELLW Sbjct: 27 YQYLNLLRDCLENGVRRDDRTGTGTYGLFGRQIRFDLSQGFPLLTTKKVHFKSVAVELLW 86 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGD+NV YL HGV+IWDEWAD DG LGP+YG QWRSW DG VIDQ++ +V++L+ Sbjct: 87 FLRGDTNVKYLQDHGVTIWDEWADDDGNLGPVYGKQWRSWAAPDGRVIDQMAQLVENLKT 146 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRRH++SAWN A ++ MALPPCHCLFQF+V +G+LSCQLYQRS D+FLG+PFNIASY Sbjct: 147 NPNSRRHVISAWNPAEVEDMALPPCHCLFQFFVADGRLSCQLYQRSADIFLGVPFNIASY 206 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A +G + G+F+H+ GDVHLY+NH EQA Q+ R+P P + + P DL Sbjct: 207 ALLTHMVAQAVGLKPGDFVHSFGDVHLYSNHIEQAKTQMERTPFAFPVLELAPK-TDLFG 265 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 F Y D T+ +Y+ H A+ A V+V Sbjct: 266 FDYADLTIANYQSHGALKAPVAV 288 >gi|221124392|ref|XP_002161436.1| PREDICTED: similar to Thymidylate synthase [Hydra magnipapillata] Length = 265 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 8/265 (3%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 +RHV G + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH +S++ ELLWFL G S Sbjct: 1 MRHVHTTGVFKSDRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLRSIIQELLWFLTGSS 60 Query: 68 NVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126 N ++L GV+IWDEWA+ + G+LGP+YGVQWRSWP DG IDQI+ ++++L+++P SR Sbjct: 61 NNNWLKERGVTIWDEWANPETGDLGPVYGVQWRSWPTPDGGHIDQIADVIKTLKSNPDSR 120 Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIPFNIA 179 R IVSAWNVA + KMAL PCH FQFYV G+LSCQLYQRS D+FLG+PFNIA Sbjct: 121 RIIVSAWNVAELSKMALMPCHAFFQFYVAPATEPGGKGRLSCQLYQRSADIFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LLT M+A G+FI T GD H+Y+NH EQ +LQLSR+P P + I + Sbjct: 181 SYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHTEQVELQLSRAPMAYPTLNIKRKPESI 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 +++EDF + YE H AI A V+V Sbjct: 241 FDYQFEDFEVLGYECHPAIKAPVAV 265 >gi|157073887|ref|NP_001096659.1| thymidylate synthase [Xenopus laevis] gi|120538084|gb|AAI29728.1| Ts protein [Xenopus laevis] Length = 309 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 129/282 (45%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD ++++++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 28 QYLDQIKYILEHGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 87 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD ++G+LGP+YG QWR + Sbjct: 88 VKGCTNSKELSAKGVKIWDANGSREFLDKQGFSTREEGDLGPVYGFQWRHFGAEYKDTHT 147 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ +WN I MALPPCH L QFYV + +LSCQ Sbjct: 148 DYSGQGVDQLQHVIDTIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVVDKELSCQ 207 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E +QL R Sbjct: 208 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHMEPLKIQLQR 267 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 SPR P++ I + ++ F +DF + Y+PH I +++V Sbjct: 268 SPRPFPKLKILRQVENIDDFTADDFLIEGYDPHPPIKMEMAV 309 >gi|268315914|ref|YP_003289633.1| thymidylate synthase [Rhodothermus marinus DSM 4252] gi|262333448|gb|ACY47245.1| thymidylate synthase [Rhodothermus marinus DSM 4252] Length = 283 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 160/283 (56%), Positives = 194/283 (68%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY + LR++++ G+ R DRTG GT S FGYQMRFDL +GFPL+TTKK+H KSVVHELL Sbjct: 1 MRQYHEFLRYILERGTRREDRTGTGTISVFGYQMRFDLQEGFPLVTTKKIHIKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YLH HGV+IWDEWA ++GELGPIYG QWR W DG IDQI+ +V+S+R Sbjct: 61 WFLRGDTNLRYLHEHGVTIWDEWATEEGELGPIYGKQWRRWLAPDGREIDQIAEVVRSIR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNG------KLSC 161 P+SRRH+VSAWNVA + MAL PCH LFQFYV +LSC Sbjct: 121 ERPWSRRHVVSAWNVADLPDERLSPQENVRRGRMALAPCHVLFQFYVAERPEWERPRLSC 180 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D FLG+PFNIASYSLLT M+A GEFI T GD H+Y NH EQ + LS Sbjct: 181 QLYQRSADAFLGVPFNIASYSLLTHMIAQQTDLDVGEFIWTGGDCHIYLNHLEQVEELLS 240 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P LP+++I + +RYEDF +Y H I A ++V Sbjct: 241 REPYPLPKLVIKRRPPSIFDYRYEDFEFVNYRHHPPIKAPIAV 283 >gi|118403890|ref|NP_001072852.1| thymidylate synthase [Xenopus (Silurana) tropicalis] gi|114107689|gb|AAI22925.1| thymidylate synthetase [Xenopus (Silurana) tropicalis] Length = 308 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 27 QYLDQIKHILERGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 86 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD ++G+LGP+YG QWR + Sbjct: 87 IKGCTNSKELSAKGVKIWDANGSREFLDKQGFSNREEGDLGPVYGFQWRHFGAEYKDTYT 146 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ +++++++ +P RR I+ +WN I MALPPCH L QFYV + +LSCQ Sbjct: 147 DYSGQGVDQLRNVIETIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVIDKELSCQ 206 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E LQL R Sbjct: 207 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHTEPLKLQLQR 266 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + ++ F +DF + Y PH +I +++V Sbjct: 267 TPRPFPKLKILRKVENIDDFTADDFLIEGYNPHPSIKMEMAV 308 >gi|222095834|ref|YP_002529891.1| thymidylate synthase [Bacillus cereus Q1] gi|221239892|gb|ACM12602.1| thymidylate synthase [Bacillus cereus Q1] Length = 318 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP + + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPGVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|294340056|emb|CAZ88424.1| thymidylate synthase (TS) (TSase) [Thiomonas sp. 3As] Length = 279 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 159/272 (58%), Positives = 192/272 (70%), Gaps = 11/272 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+RHV G D+ DRTG GTRS FG+QMRFDLS GFPL+TTK+VH+KS+ +ELLWFL Sbjct: 8 YEDLMRHVFTHGQDKTDRTGTGTRSVFGHQMRFDLSAGFPLITTKRVHFKSIAYELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 RG+SNV +L HGV+IWDEWA +DGELGP+YGVQWRSWP D IDQIS +++ L Sbjct: 68 RGESNVRWLQEHGVTIWDEWAREDGELGPVYGVQWRSWPAPTADDPHRSIDQISEVLRQL 127 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-------GKLSCQLYQRSGDVFL 172 R P SRR IVSAWNV I +MALPPCH FQFYV G+LSCQLYQRS D+FL Sbjct: 128 RTQPDSRRIIVSAWNVGQIAEMALPPCHAFFQFYVAPPRQPGGPGRLSCQLYQRSADIFL 187 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G+PFNIASY+LLT+M+A G+F+ T GD HLY+NHF Q QLSR+P P + Sbjct: 188 GVPFNIASYALLTLMIAQQTDLLPGDFVWTGGDCHLYSNHFAQVQEQLSRAPYPYPTLEF 247 Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + ++DF L Y+ H AI A V+V Sbjct: 248 ARKPESLFDYTFDDFVLSHYQHHPAIKAPVAV 279 >gi|306823471|ref|ZP_07456846.1| thymidylate synthase [Bifidobacterium dentium ATCC 27679] gi|309802582|ref|ZP_07696686.1| thymidylate synthase [Bifidobacterium dentium JCVIHMP022] gi|304553178|gb|EFM41090.1| thymidylate synthase [Bifidobacterium dentium ATCC 27679] gi|308220646|gb|EFO76954.1| thymidylate synthase [Bifidobacterium dentium JCVIHMP022] Length = 290 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 143/265 (53%), Positives = 185/265 (69%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG Q+RFDL GFPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRRILTEGTLKSDRTGTGTISLFGQQIRFDLKDGFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L H V IWDEWAD++G+LGP+YG QWRSWP D IDQI++++ + Sbjct: 87 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQITNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMVVSAWNPAEVEHMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G + GEF+ T GD H+Y+NH +Q QL R P P++ I+ L Sbjct: 207 SYSLLTLMMAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLGREPYPYPKIRIH-EAESL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y H I A V+V Sbjct: 266 FDYDYSDFEIVDYRHHPTIKAPVAV 290 >gi|149635254|ref|XP_001508361.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Ornithorhynchus anatinus] Length = 313 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 136/282 (48%), Positives = 180/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL +RH+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQVRHILRSGCKKEDRTGTGTVSVFGLQARYSLRDQFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSAKGVRIWDANGSRDFLDKHGFTSREEGDLGPVYGFQWRHFGAEYKEMNT 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++A+P RR I+ AWN I MALPPCH L QFYV NG+LSCQ Sbjct: 152 DYAGQGVDQLQKVIDTIKANPDDRRIIMCAWNPKDIPLMALPPCHALCQFYVLNGELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASYSLLT M+A + G + G+F+HTLGD H+Y NH E ++QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLEVQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH AI +++V Sbjct: 272 EPRPFPRLKILRQVETIDDFKAEDFQIEDYNPHPAIKMEMAV 313 >gi|323490213|ref|ZP_08095431.1| thymidylate synthase [Planococcus donghaensis MPA1U2] gi|323396142|gb|EGA88970.1| thymidylate synthase [Planococcus donghaensis MPA1U2] Length = 314 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 144/314 (45%), Positives = 190/314 (60%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL H++ G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK ++ +V ELL Sbjct: 1 MKQYLDLCEHILHNGAKKEDRTGTGTLSVFGHQMRFDLTQGFPLMTTKKTAFRLIVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WF++GD+NV L + IWDEWA Sbjct: 61 WFIKGDTNVRALLQDNNHIWDEWAFAQWVESDEYTGPDMTDFGRRAQKDPEFAELYKQQM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K G+LGP+YG QWRSW +G IDQ+ ++++S++ +P SRRH+V Sbjct: 121 QIFQQKVMDNPVFASKYGDLGPVYGKQWRSWATTEGGTIDQLKNVIESIKKNPDSRRHLV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 +AWN ID MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 181 TAWNPEFIDDMALPPCHIMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 + G+F+HT GD HLY+NH Q QL+R P+ LP + IN + + D T+ Sbjct: 241 ECKLEVGDFVHTTGDTHLYSNHLSQVQEQLTREPKPLPTLHINEEVESIFDLTLADITIE 300 Query: 251 SYEPHAAILAKVSV 264 Y+PH I A V+V Sbjct: 301 GYDPHPRIKAPVAV 314 >gi|229074920|ref|ZP_04207929.1| Thymidylate synthase [Bacillus cereus Rock4-18] gi|228708257|gb|EEL60421.1| Thymidylate synthase [Bacillus cereus Rock4-18] Length = 318 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWIESDEYTGPDMTDFGLRSQQDEEFKVQYDEQMD 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEIEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|19552071|ref|NP_600073.1| thymidylate synthase [Corynebacterium glutamicum ATCC 13032] gi|62389734|ref|YP_225136.1| thymidylate synthase [Corynebacterium glutamicum ATCC 13032] gi|145295015|ref|YP_001137836.1| thymidylate synthase [Corynebacterium glutamicum R] gi|25091465|sp|Q8NS38|TYSY_CORGL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172044395|sp|A4QCI7|TYSY_CORGB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|21323610|dbj|BAB98237.1| Thymidylate synthase [Corynebacterium glutamicum ATCC 13032] gi|41325069|emb|CAF19550.1| PROBABLE THYMIDYLATE SYNTHASE [Corynebacterium glutamicum ATCC 13032] gi|140844935|dbj|BAF53934.1| hypothetical protein [Corynebacterium glutamicum R] Length = 266 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR + + GS + DRTG GT S FG Q+RFDL++GFPLLTTKKVH+ SVV ELLWFL Sbjct: 7 YEDLLRKIAEEGSHKDDRTGTGTTSLFGQQIRFDLNEGFPLLTTKKVHFHSVVGELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +GDSNV +L + + IW+EWAD+DGELGP+YGVQWRSWP DG IDQIS +++LR +P Sbjct: 67 QGDSNVKWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISGALETLRNNP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GEFI T GD H+Y+NH EQ QLSR R P + +N + + Sbjct: 187 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHKEQVAEQLSREARPYPTLELN-KAASMFEYS 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D T+ Y+PH I KV+V Sbjct: 246 FDDITVSGYDPHPLIRGKVAV 266 >gi|229011512|ref|ZP_04168700.1| Thymidylate synthase [Bacillus mycoides DSM 2048] gi|228749803|gb|EEL99640.1| Thymidylate synthase [Bacillus mycoides DSM 2048] Length = 318 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVEGDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R P P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPHPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|12847560|dbj|BAB27620.1| unnamed protein product [Mus musculus] Length = 307 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 131/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 26 QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 86 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR ++ I + + F+ EDF + Y PH I +++V Sbjct: 266 EPRPFQKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307 >gi|296135862|ref|YP_003643104.1| thymidylate synthase [Thiomonas intermedia K12] gi|295795984|gb|ADG30774.1| thymidylate synthase [Thiomonas intermedia K12] Length = 279 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 159/272 (58%), Positives = 192/272 (70%), Gaps = 11/272 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+RHV G D+ DRTG GTRS FG+QMRFDLS GFPL+TTK+VH+KS+ +ELLWFL Sbjct: 8 YEDLMRHVFTHGQDKTDRTGTGTRSVFGHQMRFDLSAGFPLITTKRVHFKSIAYELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 RG+SNV +L HGV+IWDEWA +DGELGP+YGVQWRSWP D IDQIS +++ L Sbjct: 68 RGESNVRWLQEHGVTIWDEWAREDGELGPVYGVQWRSWPAPTADDPHRSIDQISEVLRQL 127 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-------GKLSCQLYQRSGDVFL 172 R P SRR IVSAWNV I +MALPPCH FQFYV G+LSCQLYQRS D+FL Sbjct: 128 RTQPDSRRIIVSAWNVGQIAEMALPPCHAFFQFYVAPPRQPGEPGRLSCQLYQRSADIFL 187 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G+PFNIASY+LLT+M+A G+F+ T GD HLY+NHF Q QLSR+P P + Sbjct: 188 GVPFNIASYALLTLMIAQQTDLLPGDFVWTGGDCHLYSNHFAQVQEQLSRAPYPYPTLEF 247 Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + ++DF L Y+ H AI A V+V Sbjct: 248 ARKPESLFDYTFDDFVLSHYQHHPAIKAPVAV 279 >gi|313140945|ref|ZP_07803138.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171] gi|313133455|gb|EFR51072.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171] Length = 260 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 146/261 (55%), Positives = 186/261 (71%), Gaps = 5/261 (1%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 +R ++ G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL+G S Sbjct: 1 MRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFLKGSS 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADP 123 NV +L H V IWD+WAD++G+LGP+YGVQWRSWP IDQI +++ +R P Sbjct: 61 NVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTSEDPNRTIDQIGNVLDLIRNHP 120 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIASYSL Sbjct: 121 DSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIASYSL 180 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LTMM+A G + GEF+ T GD H+Y+NH +Q QLSR P P++ I L ++ Sbjct: 181 LTMMIAQQTGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEI-RKADSLFDYQ 239 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YEDFT+ Y H I A V+V Sbjct: 240 YEDFTIVDYRHHPTIKAPVAV 260 >gi|323448689|gb|EGB04584.1| hypothetical protein AURANDRAFT_38942 [Aureococcus anophagefferens] Length = 510 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 129/284 (45%), Positives = 178/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYLDL+ ++ G R DRTG GT S FG +M F L FPLLTTK+V W+ V EL+ Sbjct: 227 KQYLDLIAEILDRGVRRGDRTGTGTISIFGARMSFSLRNDRFPLLTTKRVFWRGVAEELV 286 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WF+ G +N L G+ IWD ++ +LGP+YG QWR + Sbjct: 287 WFVSGSTNGKLLADKGIHIWDGNGSREFLDRRGLGHREEMDLGPVYGFQWRHFGAKYVDM 346 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+++ V++++ DP SRR ++SAWN A +D+MALPPCH QFYV NG+LS Sbjct: 347 HKDYAGEGVDQLAACVETIKQDPNSRRIVLSAWNPADLDEMALPPCHMFCQFYVANGELS 406 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFNIASY+LLT M+A G + G+F+H +GD H+Y+NH + +QL Sbjct: 407 CQMYQRSADMGLGVPFNIASYALLTRMVAQATGLKPGDFVHVIGDAHVYSNHVDALKVQL 466 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + INP + F + DFT+ Y+P+ I K++V Sbjct: 467 QREPRPFPTLTINPAKTGIDDFEFADFTVEGYKPYPKIDMKMAV 510 >gi|120555343|ref|YP_959694.1| thymidylate synthase [Marinobacter aquaeolei VT8] gi|166231710|sp|A1U3D8|TYSY_MARAV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|120325192|gb|ABM19507.1| thymidylate synthase [Marinobacter aquaeolei VT8] Length = 279 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 149/279 (53%), Positives = 189/279 (67%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ V+ G D+ DRTGVGTRS FG QMRF+L GFPL+TTKKVH +S+++ELL Sbjct: 1 MKAYLDLMQDVVDNGFDKGDRTGVGTRSVFGRQMRFNLQDGFPLVTTKKVHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G ++ ++L VSIW+EWA ++G+LGPIYG QWRSW +DG VIDQIS +++ +R Sbjct: 61 WFLKGSTDNTWLAERKVSIWNEWALENGDLGPIYGKQWRSWQCHDGRVIDQISEVIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWN A + MAL PCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 TKPNSRRLIVSAWNPAELPDESISPQDNVREGRMALAPCHCLFQFYVADGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLSRSPR 225 D+FLG+PFNIASY+LLT M+A GEF+HT GD HLY NH QL R PR Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYRNHLTDDIVFEQLRREPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP+++I + + EDF Y+P I A +++ Sbjct: 241 ALPKLVIKRKPESIFGYELEDFEFEGYDPSPVIKAPIAI 279 >gi|218897205|ref|YP_002445616.1| thymidylate synthase [Bacillus cereus G9842] gi|218544363|gb|ACK96757.1| thymidylate synthase [Bacillus cereus G9842] Length = 318 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 148/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKGWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYALLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +N ++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|25027475|ref|NP_737529.1| thymidylate synthase [Corynebacterium efficiens YS-314] gi|259507119|ref|ZP_05750019.1| thymidylate synthase [Corynebacterium efficiens YS-314] gi|29337062|sp|Q8FR47|TYSY_COREF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|23492757|dbj|BAC17729.1| putative thymidylate synthase [Corynebacterium efficiens YS-314] gi|259165397|gb|EEW49951.1| thymidylate synthase [Corynebacterium efficiens YS-314] Length = 267 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 155/261 (59%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR + G+ + DRTG GT S FG Q+R++L +GFPLLTTKKVH+ SVV ELLWFL Sbjct: 8 YEDLLRTIRDEGAHKDDRTGTGTTSLFGQQIRYNLQEGFPLLTTKKVHFHSVVGELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV +L + + IW+EWAD+DGELGP+YGVQWRSWP DG IDQIS ++ L+ +P Sbjct: 68 RGDSNVRWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISRALEMLKNNP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 128 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAL 187 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A + GEFI T GD H+Y+NH EQ D QLSR+ R P + +N L + Sbjct: 188 LTHMFAQQADLEVGEFIWTGGDCHIYDNHTEQVDEQLSRAARPYPTLELN-KAASLFDYT 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 +ED + +Y+PH I KV+V Sbjct: 247 FEDIAVSNYDPHPLIRGKVAV 267 >gi|228965208|ref|ZP_04126302.1| Thymidylate synthase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794442|gb|EEM41954.1| Thymidylate synthase [Bacillus thuringiensis serovar sotto str. T04001] Length = 318 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTSGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +N ++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|256032572|pdb|3EHI|X Chain X, Crystal Structure Of Human Thymidyalte Synthase M190k With Loop 181-197 Stabilized In The Inactive Conformation Length = 313 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + ALPPCH L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLKALPPCHALXQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|219682928|ref|YP_002469311.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis AD011] gi|219620578|gb|ACL28735.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis AD011] Length = 266 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL Sbjct: 3 YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 62 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L H V IWDEWAD++G+LGP+YGVQWRSWP D IDQIS++++ + Sbjct: 63 KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 123 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P P+M I L Sbjct: 183 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEI-RKADSL 241 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++Y +F + Y H I A ++V Sbjct: 242 FDYQYSNFHIADYRYHPTIKAPIAV 266 >gi|240171163|ref|ZP_04749822.1| thymidylate synthase [Mycobacterium kansasii ATCC 12478] Length = 266 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 162/261 (62%), Positives = 196/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ GS + DRTG GTRS FG Q+R+DLS GFPLLTTKKVH+KSV +ELLWFL Sbjct: 7 YEDLLRLVLETGSAKSDRTGTGTRSLFGQQIRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSN+ +LH+HGV+IWDEWA + G+LGPIYGVQWRSWP G IDQIS+ + LR DP Sbjct: 67 RGDSNIGWLHQHGVTIWDEWASETGDLGPIYGVQWRSWPAPSGEHIDQISAALNLLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGDIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ GEFI T GD H+Y+NH EQ QL R PR P++++ + + Sbjct: 187 LTHMMAAQSDLDVGEFIWTGGDCHIYDNHVEQVRQQLRREPRPYPKLVLVQR-DSIFDYA 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + +Y PH AI A V+V Sbjct: 246 YEDIHVENYHPHPAIKAPVAV 266 >gi|237785076|ref|YP_002905781.1| Thymidylate synthase [Corynebacterium kroppenstedtii DSM 44385] gi|237757988|gb|ACR17238.1| Thymidylate synthase [Corynebacterium kroppenstedtii DSM 44385] Length = 275 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 159/261 (60%), Positives = 189/261 (72%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++K G+ R DRTG GT S FG QMRFDLS+ FPLLTTKKV + + EL WFL Sbjct: 16 YEDLLREILKDGNHRDDRTGTGTTSLFGKQMRFDLSEYFPLLTTKKVFMRGLSEELFWFL 75 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SN+ L V IWDEWAD+DG LGPIYGVQWRSWP DG IDQIS + ++ +P Sbjct: 76 RGESNIHSLLEKNVHIWDEWADEDGNLGPIYGVQWRSWPTPDGGTIDQISQALDMIKNNP 135 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNVA + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 136 TSRRIIVSAWNVADVPSMALPPCHLLFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 195 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G GEFI T GD H+Y+NH +Q DLQLSR PR P + + DL S+ Sbjct: 196 LTHMMAQQAGLDVGEFIWTGGDCHIYDNHRDQIDLQLSRDPRPYPTLSL-TKAADLFSYT 254 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + +Y PH AI A V+V Sbjct: 255 WDDVDILNYNPHPAIKAPVAV 275 >gi|254515777|ref|ZP_05127837.1| thymidylate synthase [gamma proteobacterium NOR5-3] gi|219675499|gb|EED31865.1| thymidylate synthase [gamma proteobacterium NOR5-3] Length = 277 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 145/277 (52%), Positives = 181/277 (65%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLLR ++ G + DRTG GT S FG Q R DL+ GFPLLTTKK+H +S+V+EL+ Sbjct: 1 MQQYQDLLRDILDNGVRKEDRTGTGTLSVFGRQFRHDLADGFPLLTTKKLHLRSIVNELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV++L HGVSIW+EWA G+LGP+YG QWR+WP DG I+QI ++ L+ Sbjct: 61 WFLNGDTNVAWLQEHGVSIWNEWATDTGDLGPVYGKQWRAWPTKDGGEINQIDYVLDCLK 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR + AWNV + MALPPCH L+QFYV NG+LS QLY RS Sbjct: 121 NRPDSRRILFHAWNVEYLPDESLSPQENAAAGRMALPPCHLLYQFYVANGRLSAQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFN AS ++L MMLA G + GE I + GD HLY NH EQ QLSR PR L Sbjct: 181 SDTFLGLPFNTASLAVLVMMLAQQTGLEPGEIIISTGDSHLYLNHMEQVREQLSREPRPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ + + +R+EDF L Y PH I A V+V Sbjct: 241 PKLALLRRPESIYDYRFEDFELSDYNPHPHIPAPVAV 277 >gi|229150461|ref|ZP_04278677.1| Thymidylate synthase [Bacillus cereus m1550] gi|228632954|gb|EEK89567.1| Thymidylate synthase [Bacillus cereus m1550] Length = 318 Score = 365 bits (937), Expect = 4e-99, Method: Composition-based stats. Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ YL +H +IW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE+++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CRLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|326334727|ref|ZP_08200934.1| thymidylate synthase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693177|gb|EGD35109.1| thymidylate synthase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 274 Score = 365 bits (937), Expect = 4e-99, Method: Composition-based stats. Identities = 160/277 (57%), Positives = 199/277 (71%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL H++ G + DRTG GT S FGYQ R +L +GFPLLTTKK+H KSV++ELL Sbjct: 1 MQAYKDLLNHILTHGHSKDDRTGTGTISVFGYQFRCNLQEGFPLLTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL HGV IW+EWAD+ G+LGPIYG QWR+W + IDQI+ ++ +L+ Sbjct: 61 WFLRGDTNIHYLTEHGVRIWNEWADEKGDLGPIYGAQWRNW---NNEGIDQIAQVLHTLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH LFQFYV GKLSCQLYQRS Sbjct: 118 TNPDSRRMVVSAWNPSVMPDTSVSFAENVAHNKAALPPCHALFQFYVMEGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASY+LLT M+A V G Q G+F+H+ GD+H+Y NH EQ +LQLSR PR L Sbjct: 178 ADAFLGVPFNIASYALLTQMMAHVTGLQVGDFVHSFGDLHIYKNHLEQVELQLSREPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +NP + DL +F Y DFTL Y+P+ I KVSV Sbjct: 238 PTMKLNPQVKDLFAFDYPDFTLEGYDPYPTIKGKVSV 274 >gi|229818169|ref|ZP_04448451.1| hypothetical protein BIFANG_03464 [Bifidobacterium angulatum DSM 20098] gi|229784420|gb|EEP20534.1| hypothetical protein BIFANG_03464 [Bifidobacterium angulatum DSM 20098] Length = 266 Score = 365 bits (937), Expect = 4e-99, Method: Composition-based stats. Identities = 148/265 (55%), Positives = 188/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R + G+ + DRTG GT S FG QMRFDL + FPLLTTK V +K + +ELLWFL Sbjct: 3 YEDLVRKIFAEGTLKSDRTGTGTISLFGQQMRFDLGEYFPLLTTKTVFFKGLAYELLWFL 62 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119 +G SN+++L H V IWDEWAD++G+LGP+YGVQWRSWP IDQIS+++ + Sbjct: 63 KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPQDPNRTIDQISNVLDLI 122 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 123 KNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 182 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G + GEF+ T GD H+Y+NH EQ QL R P PQ+ I+ L Sbjct: 183 SYSLLTLMMAQQAGLEPGEFVWTGGDCHIYDNHVEQFIEQLGREPYPYPQIQIDKEP-SL 241 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + Y+ H I A V+V Sbjct: 242 FDYKYEDFHILGYQHHPTIKAPVAV 266 >gi|187736511|ref|YP_001878623.1| Thymidylate synthase [Akkermansia muciniphila ATCC BAA-835] gi|187426563|gb|ACD05842.1| Thymidylate synthase [Akkermansia muciniphila ATCC BAA-835] Length = 271 Score = 365 bits (937), Expect = 4e-99, Method: Composition-based stats. Identities = 158/271 (58%), Positives = 196/271 (72%), Gaps = 7/271 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL V+ G+ R DRTG GT FG Q R+DL GFP LTTKK+H +S+++ELL Sbjct: 1 MKQYLALLEDVLSNGAGREDRTGTGTIGVFGRQSRYDLRDGFPCLTTKKLHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ +L +GVSIWDEWAD++G+LGP+YG QWR WP DG IDQI+ +V L+ Sbjct: 61 WFLKGETNIKFLKDNGVSIWDEWADENGDLGPVYGAQWRCWPGNDGKPIDQIARLVDGLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLG 173 +P+SRRHIVSAWNVAL+D MALPPCH LFQF V LS QLYQRS D+FLG Sbjct: 121 HNPWSRRHIVSAWNVALVDDMALPPCHSLFQFCVIPAQPGEKKHGLSLQLYQRSADLFLG 180 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 +PFNIASY+LL +M A V G++ EFIHT GD+HLY NH +QA QLSR+PR LP M +N Sbjct: 181 VPFNIASYALLLLMTAQVCGYEAREFIHTFGDLHLYRNHLDQAREQLSRTPRPLPVMKLN 240 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + + F YEDF L Y+P I A +SV Sbjct: 241 PEVKTIDGFHYEDFELVGYDPLPHIKAPISV 271 >gi|75764380|ref|ZP_00743896.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228900828|ref|ZP_04065043.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222] gi|74488132|gb|EAO51832.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228858754|gb|EEN03199.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222] Length = 318 Score = 365 bits (937), Expect = 4e-99, Method: Composition-based stats. Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +N ++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|171741175|ref|ZP_02916982.1| hypothetical protein BIFDEN_00247 [Bifidobacterium dentium ATCC 27678] gi|283455458|ref|YP_003360022.1| thyA Thymidylate synthase [Bifidobacterium dentium Bd1] gi|171276789|gb|EDT44450.1| hypothetical protein BIFDEN_00247 [Bifidobacterium dentium ATCC 27678] gi|283102092|gb|ADB09198.1| thyA Thymidylate synthase [Bifidobacterium dentium Bd1] Length = 290 Score = 364 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 143/265 (53%), Positives = 185/265 (69%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R ++ G+ + DRTG GT S FG Q+RFDL GFPLLTTK V +K + +ELLWFL Sbjct: 27 YEDLVRRIMTEGTLKSDRTGTGTISLFGQQIRFDLKDGFPLLTTKTVFFKGLAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G +NV +L H V IWDEWAD++G+LGP+YG QWRSWP D IDQI++++ + Sbjct: 87 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQITNVLDLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHHPDSRRMVVSAWNPAEVEHMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT+M+A G + GEF+ T GD H+Y+NH +Q QL R P P++ I+ L Sbjct: 207 SYSLLTLMMAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLGREPYPYPKIRIH-EAESL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 + Y DF + Y H I A V+V Sbjct: 266 FDYDYSDFEIVDYRHHPTIKAPVAV 290 >gi|326501368|dbj|BAJ98915.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 516 Score = 364 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 180/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +++ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ V+ ELLW Sbjct: 234 YQYLNLVQDILRTGARKNDRTGTGTISKFGCQMRFNLRKNFPLLTTKRVFWRGVLEELLW 293 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G +N L + IWD A ++G+LGP+YG QWR + Sbjct: 294 FISGSTNAKVLQEKNIRIWDGNASREYLDSIGLSQREEGDLGPVYGFQWRHFGAEYSDMH 353 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ++ ++ ++ +P RR I+SAWN + KMALPPCH QFYV+NG+LSC Sbjct: 354 ADYTGKGFDQLADVINKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 413 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V GEF+H +GD H+Y+ H + + QL Sbjct: 414 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGEFVHVIGDAHVYSTHVQALEEQLQ 473 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP D+ SF DF L Y+PH I K++V Sbjct: 474 KQPKPFPILKINPLKKDIDSFVASDFKLACYDPHQKIEMKMAV 516 >gi|90419201|ref|ZP_01227111.1| thymidylate synthase [Aurantimonas manganoxydans SI85-9A1] gi|90336138|gb|EAS49879.1| thymidylate synthase [Aurantimonas manganoxydans SI85-9A1] Length = 264 Score = 364 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 176/264 (66%), Positives = 217/264 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V++ GSDR DRTG GTRS FG+QMRFDL+ GFP+LTTKK+HWKSVVHELL Sbjct: 1 MRQYLDLLTRVMETGSDRPDRTGTGTRSVFGHQMRFDLADGFPMLTTKKLHWKSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL+ +GV IWDEWAD+ G+LGP+YG QWRSWPDYDG IDQI+ +V+++R Sbjct: 61 WFLKGDTNIAYLNANGVRIWDEWADEHGDLGPVYGAQWRSWPDYDGGHIDQIAKVVEAIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR +VSAWN AL+D+MALPPCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIAS Sbjct: 121 RTPQSRRLVVSAWNPALVDEMALPPCHCLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A G + G+F+HTLGD HLY+NH EQA LQL+R+P LP + +NP I DL Sbjct: 181 YALLTAMVAQATGLKPGDFVHTLGDAHLYSNHVEQAQLQLTRTPLPLPTLTLNPAIDDLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +F ++D L YE H I AKV+V Sbjct: 241 AFGFDDIALEGYEAHPHIKAKVAV 264 >gi|119475457|ref|ZP_01615810.1| Thymidylate synthase [marine gamma proteobacterium HTCC2143] gi|119451660|gb|EAW32893.1| Thymidylate synthase [marine gamma proteobacterium HTCC2143] Length = 279 Score = 364 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 154/279 (55%), Positives = 194/279 (69%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ VI G+D+ DRTGVGTRS FG QMRFDLS+GFPL+TTKK+H KS+++EL+ Sbjct: 1 MQQYLDLMQDVIDNGTDKGDRTGVGTRSVFGRQMRFDLSEGFPLVTTKKIHLKSIIYELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G ++ ++L GVSIWD+WA DG+LGPIYG QWRSW DG+ IDQI+ +VQ + Sbjct: 61 WFLNGSTDNNWLKERGVSIWDDWALADGDLGPIYGKQWRSWDCPDGSTIDQIADLVQMIN 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVS WN A + ALPPCH LFQFYV NG+LSCQLYQRS Sbjct: 121 KSPDSRRLIVSGWNPADLPDESIDPRANVEQGRAALPPCHTLFQFYVANGRLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF--EQADLQLSRSPR 225 D+FLG+PFNIASYSLLT M+A + GEF+HTLGD HLY+NH + QL R PR Sbjct: 181 ADLFLGVPFNIASYSLLTHMIAQQCDLEVGEFVHTLGDCHLYSNHLTSDIVYKQLQREPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LPQ+ + + +++EDF +Y+P I A ++V Sbjct: 241 ELPQLRLKRRPASIFDYQFEDFEFANYDPLPLIKAPIAV 279 >gi|307108201|gb|EFN56442.1| hypothetical protein CHLNCDRAFT_30873 [Chlorella variabilis] Length = 508 Score = 364 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL+++ V+ G R DRTG GT S FG MRF+L FPLLTTK+V W+ V ELLW Sbjct: 226 HQYLEMIEDVMANGVFRGDRTGTGTYSKFGATMRFNLRHSFPLLTTKRVFWRGVAEELLW 285 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F+ G +N L G+ IWD ++ +LGP+YG QWR + Sbjct: 286 FVSGCTNARVLMDKGIHIWDGNGSREYLDSIGLSHREEMDLGPVYGFQWRHFGAEYTDMH 345 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ +P RR ++SAWN A + MALPPCH QFYV +G+LSC Sbjct: 346 ADYGGKGVDQLAELIHKIKTNPNDRRLVLSAWNPAALTDMALPPCHMFCQFYVADGELSC 405 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H LGD H+Y NH QL Sbjct: 406 QMYQRSCDLGLGVPFNIASYSLLTCMVAQVCGLRPGDFVHVLGDAHVYANHVGPLRDQLK 465 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P+++INP D+ SF ++DF L Y+PH AI +++V Sbjct: 466 NAPRHFPRLLINPAKTDIDSFVFDDFQLEGYQPHKAIKMQMAV 508 >gi|299821697|ref|ZP_07053585.1| thymidylate synthase [Listeria grayi DSM 20601] gi|299817362|gb|EFI84598.1| thymidylate synthase [Listeria grayi DSM 20601] Length = 314 Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats. Identities = 151/314 (48%), Positives = 191/314 (60%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L + V++ G+ + DRTG GT STFGYQMRFDL+KGFP+LTTK+V ++ VV ELL Sbjct: 1 MKQYLELEKFVLEHGTQKGDRTGTGTISTFGYQMRFDLAKGFPILTTKRVAFRLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK---------------------------------- 86 WFL GD+N+ YL +H +IW+EWA + Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERYVKSEAYKGPDMTDFGLRAEKDAAFREVYKQEM 120 Query: 87 ----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 GELG IYG QWR W G IDQ+ ++++++ P SRR IV Sbjct: 121 EAFKQAILTDEAFAATYGELGNIYGKQWREWKTSSGETIDQLKEVIEAIKKTPDSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDVPTMALPPCHTMFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G + GEFIHT+GD HLYNNH EQ QLSR P+ LP + + + F D +L Sbjct: 241 ETGLEVGEFIHTMGDAHLYNNHIEQVKEQLSREPKALPTLRLAEEPASIFDFEVADISLE 300 Query: 251 SYEPHAAILAKVSV 264 YEPH AI A +SV Sbjct: 301 GYEPHPAIKAPISV 314 >gi|183602019|ref|ZP_02963388.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis HN019] gi|241190505|ref|YP_002967899.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195911|ref|YP_002969466.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218904|gb|EDT89546.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis HN019] gi|240248897|gb|ACS45837.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250465|gb|ACS47404.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793492|gb|ADG33027.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis V9] Length = 290 Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats. Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL Sbjct: 27 YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L H V IWDEWAD++G+LGP+YGVQWRSWP D IDQIS++++ + Sbjct: 87 KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 147 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P P+M I L Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEI-RKADSL 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++Y +F + Y H I A ++V Sbjct: 266 FDYQYSNFHIADYRYHPTIKAPIAV 290 >gi|317508366|ref|ZP_07966039.1| thymidylate synthase [Segniliparus rugosus ATCC BAA-974] gi|316253323|gb|EFV12720.1| thymidylate synthase [Segniliparus rugosus ATCC BAA-974] Length = 270 Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats. Identities = 155/261 (59%), Positives = 193/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G +R DRTG GT S FG+Q+R+DL+KGFPL+TTKKVH KS+V+ELLWFL Sbjct: 11 YEDLLRLVLEQGVERSDRTGTGTLSVFGHQLRYDLAKGFPLITTKKVHLKSIVYELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+NV +L GV+IWDEWA +DG LGP+YG QWRSWP DG V+DQI+ + LR DP Sbjct: 71 RGDTNVRWLQERGVTIWDEWAREDGGLGPVYGAQWRSWPAPDGAVVDQIAQALHLLRTDP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 +SRR +VSAWNV + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 131 HSRRILVSAWNVGELPKMALAPCHILFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G + G+F+ T GD HLY NH +QA QL+R P P++ + + Sbjct: 191 LTHMMAQQAGLEAGDFVWTGGDCHLYLNHVDQAREQLARDPFPYPRLELAERP-SVFEHE 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + Y+ H AI A V+V Sbjct: 250 YEDVRILGYQSHPAIKAPVAV 270 >gi|15827801|ref|NP_302064.1| thymidylate synthase [Mycobacterium leprae TN] gi|221230278|ref|YP_002503694.1| thymidylate synthase [Mycobacterium leprae Br4923] gi|15214323|sp|Q9CBW0|TYSY_MYCLE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|13093353|emb|CAC30470.1| thymidylate synthase [Mycobacterium leprae] gi|219933385|emb|CAR71614.1| thymidylate synthase [Mycobacterium leprae Br4923] Length = 266 Score = 364 bits (935), Expect = 7e-99, Method: Composition-based stats. Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V+ G + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH+KSVV+ELLWFL Sbjct: 7 YEDLLRLVLDCGVAKMDRTGTGTRSLFGQQLRYDLSVGFPLVTTKKVHFKSVVYELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGDSNV++LH HGV+IWDEWA G+LGPIYGVQWRSWP G+ IDQIS+ + LR +P Sbjct: 67 RGDSNVAWLHEHGVNIWDEWASSTGDLGPIYGVQWRSWPTSSGDYIDQISTALDLLRTEP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR IVSAWNV I +MALPPCH FQFYV G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRIIVSAWNVGEIPQMALPPCHAFFQFYVAQGRLSCQLYQRSADMFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A+ G GEF+ T GD H+Y+NH EQ LQLSR PR P++ + + + Sbjct: 187 LTHMMAAQSGLLVGEFVWTGGDCHIYDNHVEQVQLQLSREPRAYPELFLAQR-DSIFDYV 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + +Y+PH AI A V++ Sbjct: 246 YEDVVVTNYDPHPAIKAPVAI 266 >gi|47570165|ref|ZP_00240821.1| thymidylate synthase [Bacillus cereus G9241] gi|47553184|gb|EAL11579.1| thymidylate synthase [Bacillus cereus G9241] Length = 318 Score = 364 bits (935), Expect = 7e-99, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRQFPELTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|228933544|ref|ZP_04096395.1| Thymidylate synthase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826142|gb|EEM71924.1| Thymidylate synthase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 318 Score = 364 bits (935), Expect = 7e-99, Method: Composition-based stats. Identities = 147/313 (46%), Positives = 195/313 (62%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL + +IW+EW Sbjct: 66 FMKGDTNIRYLLQQNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G LG +YG QWR+W G +DQ+ +++ ++ P SRR IVS Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + G F+HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Sbjct: 246 CGLEVGAFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH I A V+V Sbjct: 306 YDPHPVIKAPVAV 318 >gi|304382975|ref|ZP_07365456.1| thymidylate synthase [Prevotella marshii DSM 16973] gi|304335894|gb|EFM02143.1| thymidylate synthase [Prevotella marshii DSM 16973] Length = 282 Score = 364 bits (934), Expect = 8e-99, Method: Composition-based stats. Identities = 167/264 (63%), Positives = 203/264 (76%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL ++ G+ + DRTG GT S FG+QMRF + GFPLLTTK++H KS+++ELL Sbjct: 19 MKQYLDLLHLLLTEGTKKGDRTGTGTLSVFGHQMRFRMEDGFPLLTTKRLHLKSIIYELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGVSIWDEWAD +G+LGP+YG QWRSW G IDQI ++ LR Sbjct: 79 WFLKGDTNVRYLQEHGVSIWDEWADANGDLGPVYGHQWRSWAGPKGETIDQIQGVLNQLR 138 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN A +D MALPPCHCLFQFYV G+LS QLYQRS D FLG+PFNIAS Sbjct: 139 QNPDSRRMIVSAWNPAEVDSMALPPCHCLFQFYVAEGRLSLQLYQRSADTFLGVPFNIAS 198 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL +M+A V G + G+F++T GD HLY NH EQA LQL+R+PR LP M +NP+I DL Sbjct: 199 YALLLLMMAQVTGLRAGDFVYTTGDTHLYLNHTEQARLQLTRTPRPLPTMKLNPDIADLF 258 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 SFRYEDF L +Y+P+ I A VSV Sbjct: 259 SFRYEDFQLSNYDPYDHIKADVSV 282 >gi|299469759|emb|CBN76613.1| conserved unknown protein [Ectocarpus siliculosus] Length = 581 Score = 364 bits (934), Expect = 9e-99, Method: Composition-based stats. Identities = 128/283 (45%), Positives = 176/283 (62%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYL+L+ ++ G R DRTG GT S FG QMRF L + FPLLTTK+V W+ V ELLW Sbjct: 299 QYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLW 358 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G +N + L G+ IWD ++G+LGP+YG QWR + Sbjct: 359 FVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMH 418 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ +Q ++ +P RR ++SAWN A + KMALPPCH QFYV G+LSC Sbjct: 419 ADYTGKGVDQLAECIQKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSC 478 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT ++A G + G+F+HT+GD H+Y NH + QL Sbjct: 479 QMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGDFVHTIGDAHVYVNHVDALREQLK 538 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + IN + D+ SF Y+ ++ Y P+ I K++V Sbjct: 539 RKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 581 >gi|297571008|ref|YP_003696782.1| thymidylate synthase [Arcanobacterium haemolyticum DSM 20595] gi|296931355|gb|ADH92163.1| thymidylate synthase [Arcanobacterium haemolyticum DSM 20595] Length = 266 Score = 364 bits (934), Expect = 9e-99, Method: Composition-based stats. Identities = 144/264 (54%), Positives = 186/264 (70%), Gaps = 2/264 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY DLL V+ G+ + DRTG GT S FG Q+R+DLS+GFP +TTK V K+V ELLW Sbjct: 4 RQYEDLLADVLANGTVKGDRTGTGTLSVFGRQLRYDLSQGFPRITTKFVAMKAVKGELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGD+N+S+L G+SIWDEWA+ DG+LGP+YG QWRSWP G IDQI++++ ++ Sbjct: 64 FLRGDTNISWLRERGISIWDEWANDDGDLGPVYGYQWRSWPAPSGEHIDQIANVIDQIKN 123 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR IVSAWNVA +D MAL PCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY Sbjct: 124 NPDSRRLIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASY 183 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A G G+F+ + GD H+Y NH EQ Q+SR P P + + D+ S Sbjct: 184 ALLTHMVAQQTGLDVGDFVWSGGDCHIYLNHLEQVREQISREPYPFPTLAL-TKAPDIFS 242 Query: 242 FRYEDFT-LRSYEPHAAILAKVSV 264 + +D + Y+ H A+ A V+V Sbjct: 243 YTMDDISAADGYQHHPALHAPVAV 266 >gi|195576199|ref|XP_002077964.1| GD22790 [Drosophila simulans] gi|194189973|gb|EDX03549.1| GD22790 [Drosophila simulans] Length = 321 Score = 364 bits (934), Expect = 9e-99, Method: Composition-based stats. Identities = 141/286 (49%), Positives = 184/286 (64%), Gaps = 23/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+ YLDLLRH+I G R DRT VGT S FG QMRFD+ FPLLTTK+V +++V ELL Sbjct: 37 MN-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+ G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 96 WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158 DY G IDQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QFYV G+ Sbjct: 156 DDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGE 215 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P++II + D+ FR+EDF + Y PH I +++V Sbjct: 276 QLERTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPHPKIKMEMAV 321 >gi|289178234|gb|ADC85480.1| Thymidylate synthase [Bifidobacterium animalis subsp. lactis BB-12] Length = 297 Score = 364 bits (934), Expect = 9e-99, Method: Composition-based stats. Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL Sbjct: 34 YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 93 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L H V IWDEWAD++G+LGP+YGVQWRSWP D IDQIS++++ + Sbjct: 94 KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 153 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA Sbjct: 154 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 213 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLTMM+A G + GEF+ T GD H+Y+NH EQ QLSR P P+M I L Sbjct: 214 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEI-RKADSL 272 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++Y +F + Y H I A ++V Sbjct: 273 FDYQYSNFHIADYRYHPTIKAPIAV 297 >gi|118602621|ref|YP_903836.1| thymidylate synthase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166231728|sp|A1AWQ8|TYSY_RUTMC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|118567560|gb|ABL02365.1| thymidylate synthase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 264 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD LR V G+++ DRTG+GT S FGYQMRFDLS GFPL+TTK+VH SVVHELL Sbjct: 1 MKQYLDFLRLVKNTGTNKTDRTGIGTTSLFGYQMRFDLSDGFPLITTKRVHLPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL +GV IW+EWADK+G+LGPIYGVQWR+W + G IDQI +++ ++ Sbjct: 61 WFLSGATNIKYLQENGVRIWNEWADKNGDLGPIYGVQWRNWQNVRGESIDQIMQVIEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV ++ MALPPCH FQFYV GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NTPDSRRIIVSAWNVGELENMALPPCHAFFQFYVALGKLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + G+FI + GD H+Y+NH +Q ++QL+R+P+TL + IN + Sbjct: 181 YALLTHMMAQQCDLEVGDFIWSGGDCHIYSNHTKQVEIQLARTPKTLATLKINNKPDSIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF +Y A I A V++ Sbjct: 241 DYNFEDFEFINYVFDAYIKATVAI 264 >gi|311693477|gb|ADP96350.1| thymidylate synthase [marine bacterium HP15] Length = 279 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 147/279 (52%), Positives = 189/279 (67%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ V+ G D+ DRTGVGTRS FG Q+RF+L +GFPL+TTKKVH +S+++ELL Sbjct: 1 MKAYLDLMQDVVDNGFDKGDRTGVGTRSVFGRQIRFNLQEGFPLVTTKKVHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG ++ ++L VSIW+EWA ++G+LGPIYG QWRSW +G V+DQIS +++ +R Sbjct: 61 WFLRGSTDNTWLQERKVSIWNEWALENGDLGPIYGKQWRSWQCPNGEVVDQISEVIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWN A + MAL PCHCLFQFYV +GKLSCQLYQRS Sbjct: 121 TKPNSRRLIVSAWNPAELPDESIGPQDNVREGRMALAPCHCLFQFYVVDGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLSRSPR 225 D+FLG+PFNIASY+LLT M+A GEF+HT GD HLY NH QL R PR Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYQNHLTDDIVFEQLKREPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP ++I + + EDF Y+P+ I A +++ Sbjct: 241 ALPTLVIKRKPASIFEYELEDFDFEGYDPYPGIKAPIAI 279 >gi|228471682|ref|ZP_04056455.1| thymidylate synthase [Capnocytophaga gingivalis ATCC 33624] gi|228276835|gb|EEK15530.1| thymidylate synthase [Capnocytophaga gingivalis ATCC 33624] Length = 274 Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 157/277 (56%), Positives = 199/277 (71%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DLL H++ +G + DRTG GT S FGYQ+R +L +GFPLLTTKK+H KSV++ELL Sbjct: 1 MQAYKDLLNHILTYGHSKDDRTGTGTISVFGYQLRHNLQEGFPLLTTKKIHLKSVIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL HGV IW+EWAD+ G+LGP+YG QWR+W +G IDQI+ ++ +L+ Sbjct: 61 WFLRGDTNIHYLTEHGVRIWNEWADEQGDLGPVYGAQWRNW---NGEGIDQITEVLHTLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH LFQFYV G+LSCQLYQRS Sbjct: 118 TNPDSRRMVVSAWNPSVMPDTSLSFAENVANNKAALPPCHALFQFYVMEGRLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASY+LLT M+A V G Q G+F+H+ GD+H+Y NH EQ LQLSR PR L Sbjct: 178 ADAFLGVPFNIASYALLTQMMAHVTGLQVGDFVHSFGDLHIYKNHLEQVKLQLSREPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P M +N + DL +F Y DF L Y+P+ I KVSV Sbjct: 238 PTMKLNEKVTDLFAFDYSDFILEGYDPYPTIKGKVSV 274 >gi|189095970|pdb|2RD8|B Chain B, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 Length = 313 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPP H L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPXHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|53803146|ref|YP_115128.1| thymidylate synthase [Methylococcus capsulatus str. Bath] gi|62901250|sp|Q603S2|TYSY_METCA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|53756907|gb|AAU91198.1| thymidylate synthase [Methylococcus capsulatus str. Bath] Length = 260 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 145/264 (54%), Positives = 181/264 (68%), Gaps = 4/264 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G + DRTG GT S FG MRFDLS+G PL+TTKK+H S++HELL Sbjct: 1 MRPYLDLLRDILDHGCPKGDRTGTGTLSVFGRMMRFDLSRGLPLVTTKKLHLPSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+ G +NV L RHGV+IWDEWAD +GELGP+YG QWR+W IDQ++ +V+ LR Sbjct: 61 WFVSGSTNVRDLQRHGVTIWDEWADDNGELGPVYGRQWRNWN----GAIDQLAGLVEQLR 116 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VSAWN + +D MALPPCH FQ +V +G+LS RS DVFLG+PFNIA Sbjct: 117 RNPGSRRLLVSAWNPSDLDAMALPPCHYAFQCHVADGRLSLMFQMRSADVFLGLPFNIAG 176 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA G++ GE I GDVHLY NH EQA LQL+R P P + + L Sbjct: 177 YALLTHMLAQQTGYEPGELIWCGGDVHLYLNHLEQARLQLTREPYPPPTLKLARKPGSLF 236 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +RYEDF + Y+ H I A V+V Sbjct: 237 DYRYEDFVVEDYQAHPHIKAAVAV 260 >gi|197104285|ref|YP_002129662.1| thymidylate synthase [Phenylobacterium zucineum HLK1] gi|196477705|gb|ACG77233.1| thymidylate synthase [Phenylobacterium zucineum HLK1] Length = 286 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 169/268 (63%), Positives = 203/268 (75%), Gaps = 6/268 (2%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+LL +++ G+ R DRTG GT FG QMRFDLS+GFPLLTTKK+H KS++ ELLW Sbjct: 20 RQYLNLLADILETGAARGDRTGTGTLGVFGRQMRFDLSQGFPLLTTKKLHRKSIILELLW 79 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FLRGD+NV +L GVSIWDEWAD DGELGP+YG QWRSW DG VIDQIS +V SL+ Sbjct: 80 FLRGDTNVRWLQERGVSIWDEWADADGELGPVYGKQWRSWAAPDGRVIDQISGVVNSLKT 139 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVFLGIPF 176 +P SRRHIVSAWN A ++ MALPPCHCLFQF+V +LSCQLYQRS DVFLG+PF Sbjct: 140 NPESRRHIVSAWNPAEVEDMALPPCHCLFQFFVAPDRDGVKRLSCQLYQRSADVFLGVPF 199 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 NIASY+LLT+M+A V G+ GEF+HTLGD HLY NH EQA +QL+R P LP M + + Sbjct: 200 NIASYALLTLMMAKVTGYAPGEFVHTLGDAHLYLNHVEQARIQLAREPMPLPVMHVA-DR 258 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 DL +F YEDF L Y+ H +I A ++V Sbjct: 259 DDLFAFAYEDFKLEGYQAHPSIPAPIAV 286 >gi|258544418|ref|ZP_05704652.1| thymidylate synthase [Cardiobacterium hominis ATCC 15826] gi|258520307|gb|EEV89166.1| thymidylate synthase [Cardiobacterium hominis ATCC 15826] Length = 258 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 159/264 (60%), Positives = 198/264 (75%), Gaps = 6/264 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLRH+++ G+ + DRTG GTRS FGYQMRFDL++GFPLLTTK+VH+KSV +ELL Sbjct: 1 MQTYLDLLRHILEHGAPKADRTGTGTRSVFGYQMRFDLTRGFPLLTTKRVHFKSVAYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ +LH HGVSIWDEWAD G+LGP+YG QWR W DQI++++ LR Sbjct: 61 WFLRGDTNIHWLHEHGVSIWDEWADARGDLGPVYGKQWRDWGGC-----DQIANVLDLLR 115 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV + +MAL PCH LFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 116 TDPDSRRMIVSAWNVGELPQMALAPCHALFQFYVAGGRLSCQLYQRSADVFLGVPFNIAS 175 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q GE + T GDVHLYNNH QA+ QL+R P LP + + + + Sbjct: 176 YALLIHMMAQQANLQPGELVWTGGDVHLYNNHLAQAETQLAREPYPLPTLAL-RHAPSID 234 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +++Y D TL++Y+ H AI A V+V Sbjct: 235 AYQYSDITLQNYQSHPAIPAPVAV 258 >gi|254474624|ref|ZP_05088010.1| thymidylate synthase [Ruegeria sp. R11] gi|214028867|gb|EEB69702.1| thymidylate synthase [Ruegeria sp. R11] Length = 277 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 141/277 (50%), Positives = 189/277 (68%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY + L ++ G DRTG GT S FG Q R+ L+ GFPL+TTKK+H +S++HELL Sbjct: 1 MRQYHEALEQILTHGEASSDRTGTGTISYFGMQTRYPLADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P Y Sbjct: 61 WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRHFPRLELAEGTTGDEPLYRAG 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQI+ +V+ + P SRR IVSAWN A + MALPPCH L+Q V K+ QLYQRS Sbjct: 121 SVDQIADLVRMIETSPDSRRLIVSAWNPADVPDMALPPCHTLWQVRVQGRKMHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LL MLA V G++ G+F+HT+GD H+Y+NH +Q LQLSR+P+ L Sbjct: 181 ADMFLGVPFNIASYALLLKMLAHVTGYEAGDFVHTIGDAHIYSNHMDQVKLQLSRTPKPL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I ++ + F YEDF + +Y+P I A V+V Sbjct: 241 PELHIKRDVPSIFDFTYEDFEVVNYDPDPVIKAPVAV 277 >gi|296394396|ref|YP_003659280.1| thymidylate synthase [Segniliparus rotundus DSM 44985] gi|296181543|gb|ADG98449.1| thymidylate synthase [Segniliparus rotundus DSM 44985] Length = 270 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 156/261 (59%), Positives = 195/261 (74%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR V++ G++R DRTG GT S FG+Q+R+DL+KGFPL+TTKKVH KS+VHELLWFL Sbjct: 11 YEDLLRLVLERGAERPDRTGTGTLSLFGHQLRYDLAKGFPLVTTKKVHLKSIVHELLWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+NV +L GV+IWDEWA +DG LGP+YG QWRSWP DG V+DQI V+ LR+DP Sbjct: 71 RGDTNVRWLQERGVTIWDEWAREDGSLGPVYGAQWRSWPTPDGEVVDQIDQAVRLLRSDP 130 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 +SRR +VSAWNV + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L Sbjct: 131 HSRRIVVSAWNVGELSKMALAPCHILFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G G+F+ T GD HLY NH +QA Q++R+P P++ + + + Sbjct: 191 LTHMMAQQAGLHVGDFVWTGGDCHLYRNHLDQAREQIARTPYPYPRLEL-RQRPSVFEYE 249 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 YED + Y H AI A V+V Sbjct: 250 YEDIQIVDYRSHPAIKAPVAV 270 >gi|84687905|ref|ZP_01015772.1| thymidylate synthase [Maritimibacter alkaliphilus HTCC2654] gi|84664099|gb|EAQ10596.1| thymidylate synthase [Rhodobacterales bacterium HTCC2654] Length = 272 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 146/272 (53%), Positives = 193/272 (70%), Gaps = 8/272 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L+ V+ G DRTG GT S FG Q R+ L++GFPL+TTKK+H +S+VHELL Sbjct: 1 MRQYLDALKTVLDQGVPSTDRTGTGTTSYFGMQCRYPLAEGFPLVTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGN--------VIDQI 112 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P D +DQI Sbjct: 61 WFLSGDTNIGYLKENGVSIWDEWADENGDLGPVYGHQWRHFPKIDRGADGAPVIGEVDQI 120 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 + +V+ +R P SRR IVSAWN + MALPPCH L+Q + GKL QLYQRS D+FL Sbjct: 121 ADLVEQIRRSPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRIIGGKLHLQLYQRSADMFL 180 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G+PFNIASY+LL +MLA V G++ G+F+H++GD H+Y+NH +Q QLSR+PR LPQ+ I Sbjct: 181 GVPFNIASYALLQVMLAHVTGYEPGDFVHSIGDAHIYSNHMDQVHEQLSRTPRPLPQIEI 240 Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ + F+Y+DF Y+P AI A V+V Sbjct: 241 KRHVGSIFDFKYDDFAFPGYDPAPAIKAPVAV 272 >gi|257082535|ref|ZP_05576896.1| thymidylate synthase [Enterococcus faecalis E1Sol] gi|256990565|gb|EEU77867.1| thymidylate synthase [Enterococcus faecalis E1Sol] Length = 315 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LEVGEFVHTLGDAHLYKNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|312373107|gb|EFR20923.1| hypothetical protein AND_18288 [Anopheles darlingi] Length = 295 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 139/282 (49%), Positives = 179/282 (63%), Gaps = 21/282 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL L+R ++ G+ R DRTGVGT S FG Q+R+ L G FPLLTTKKV ++ + ELLWF Sbjct: 14 YLQLIRDIVSKGNKRSDRTGVGTLSIFGTQLRYSLRDGTFPLLTTKKVFFRGIAEELLWF 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102 +RG +N L GV IWD + ++G+LGP+YG QWR + Sbjct: 74 IRGSTNAKELQAKGVRIWDGNSTREFLDSCGFTDREEGDLGPVYGFQWRHFGATYGTCHD 133 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G DQ++ I+ L+ +P RR I+SAWN I MALPPCHCL QFYV NG+LSCQ Sbjct: 134 DYTGKGKDQLAEIIDKLKNNPTDRRIILSAWNPVDIPIMALPPCHCLVQFYVANGELSCQ 193 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS DV LG+PFNIASYSLLT M+A V G + GEFIHT+GD H+Y NH + QL R Sbjct: 194 MYQRSADVGLGVPFNIASYSLLTHMIAHVTGLKAGEFIHTMGDTHIYLNHVDALKEQLQR 253 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + I + + F+YEDF + Y PH AI +++V Sbjct: 254 EPKPFPTLTIKRQVASIDDFQYEDFAINDYNPHPAIKMEMAV 295 >gi|290560084|pdb|3EBU|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPP H L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPXHALCQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|94676836|ref|YP_588974.1| thymidylate synthase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|122988104|sp|Q1LSU0|TYSY_BAUCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|94219986|gb|ABF14145.1| thymidylate synthase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 264 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 197/264 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+R V G + DRT GT S FG+QMRF+LS GFPL+TTK+ H +S+++ELL Sbjct: 1 MKQYLELMRLVRTQGISKVDRTNTGTLSIFGHQMRFNLSHGFPLITTKRCHLRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N++YL +H V+IWDEW ++ G+LGPIYG QWR+W DG+ IDQ+S ++ L+ Sbjct: 61 WFLNGDTNINYLRKHHVTIWDEWINEKGDLGPIYGRQWRAWGTADGSYIDQLSDVMLQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV I +MAL PCH LFQFYV NG LSCQLYQRS D+FLG+PFNI+S Sbjct: 121 HNPDSRRIIVSAWNVGEIKQMALAPCHVLFQFYVANGVLSCQLYQRSCDMFLGLPFNISS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A Q GEFI T GD+HLY NH +Q DLQL R+PR LPQ+II L Sbjct: 181 YALLIHMVAQQCDLQLGEFIWTGGDIHLYRNHLKQTDLQLKRNPRPLPQLIIKRRPASLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++++DF L Y+PH AI A+V+V Sbjct: 241 QYQFDDFYLSGYDPHPAIKAQVAV 264 >gi|29376139|ref|NP_815293.1| thymidylate synthase [Enterococcus faecalis V583] gi|227518767|ref|ZP_03948816.1| thymidylate synthase [Enterococcus faecalis TX0104] gi|227553378|ref|ZP_03983427.1| thymidylate synthase [Enterococcus faecalis HH22] gi|229550000|ref|ZP_04438725.1| thymidylate synthase [Enterococcus faecalis ATCC 29200] gi|255972782|ref|ZP_05423368.1| thymidylate synthase [Enterococcus faecalis T1] gi|256619078|ref|ZP_05475924.1| thymidylate synthase [Enterococcus faecalis ATCC 4200] gi|256762514|ref|ZP_05503094.1| thymidylate synthase [Enterococcus faecalis T3] gi|256965110|ref|ZP_05569281.1| thymidylate synthase [Enterococcus faecalis HIP11704] gi|257089900|ref|ZP_05584261.1| thymidylate synthase [Enterococcus faecalis CH188] gi|257416108|ref|ZP_05593102.1| thymidylate synthase [Enterococcus faecalis AR01/DG] gi|257419311|ref|ZP_05596305.1| thymidylate synthase [Enterococcus faecalis T11] gi|257422604|ref|ZP_05599594.1| thymidylate synthase [Enterococcus faecalis X98] gi|307273209|ref|ZP_07554455.1| thymidylate synthase [Enterococcus faecalis TX0855] gi|307274946|ref|ZP_07556109.1| thymidylate synthase [Enterococcus faecalis TX2134] gi|312900775|ref|ZP_07760072.1| thymidylate synthase [Enterococcus faecalis TX0470] gi|312903323|ref|ZP_07762503.1| thymidylate synthase [Enterococcus faecalis TX0635] gi|312951509|ref|ZP_07770405.1| thymidylate synthase [Enterococcus faecalis TX0102] gi|62901361|sp|Q834R3|TYSY_ENTFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|29343601|gb|AAO81363.1| thymidylate synthase [Enterococcus faecalis V583] gi|227073762|gb|EEI11725.1| thymidylate synthase [Enterococcus faecalis TX0104] gi|227177483|gb|EEI58455.1| thymidylate synthase [Enterococcus faecalis HH22] gi|229304913|gb|EEN70909.1| thymidylate synthase [Enterococcus faecalis ATCC 29200] gi|255963800|gb|EET96276.1| thymidylate synthase [Enterococcus faecalis T1] gi|256598605|gb|EEU17781.1| thymidylate synthase [Enterococcus faecalis ATCC 4200] gi|256683765|gb|EEU23460.1| thymidylate synthase [Enterococcus faecalis T3] gi|256955606|gb|EEU72238.1| thymidylate synthase [Enterococcus faecalis HIP11704] gi|256998712|gb|EEU85232.1| thymidylate synthase [Enterococcus faecalis CH188] gi|257157936|gb|EEU87896.1| thymidylate synthase [Enterococcus faecalis ARO1/DG] gi|257161139|gb|EEU91099.1| thymidylate synthase [Enterococcus faecalis T11] gi|257164428|gb|EEU94388.1| thymidylate synthase [Enterococcus faecalis X98] gi|306508394|gb|EFM77501.1| thymidylate synthase [Enterococcus faecalis TX2134] gi|306510194|gb|EFM79218.1| thymidylate synthase [Enterococcus faecalis TX0855] gi|310630475|gb|EFQ13758.1| thymidylate synthase [Enterococcus faecalis TX0102] gi|310633199|gb|EFQ16482.1| thymidylate synthase [Enterococcus faecalis TX0635] gi|311292256|gb|EFQ70812.1| thymidylate synthase [Enterococcus faecalis TX0470] gi|315147280|gb|EFT91296.1| thymidylate synthase [Enterococcus faecalis TX4244] gi|315150521|gb|EFT94537.1| thymidylate synthase [Enterococcus faecalis TX0012] gi|315152468|gb|EFT96484.1| thymidylate synthase [Enterococcus faecalis TX0031] gi|315155746|gb|EFT99762.1| thymidylate synthase [Enterococcus faecalis TX0043] gi|315158088|gb|EFU02105.1| thymidylate synthase [Enterococcus faecalis TX0312] gi|315169020|gb|EFU13037.1| thymidylate synthase [Enterococcus faecalis TX1341] gi|315169743|gb|EFU13760.1| thymidylate synthase [Enterococcus faecalis TX1342] gi|315172296|gb|EFU16313.1| thymidylate synthase [Enterococcus faecalis TX1346] gi|315575852|gb|EFU88043.1| thymidylate synthase [Enterococcus faecalis TX0309B] gi|315577691|gb|EFU89882.1| thymidylate synthase [Enterococcus faecalis TX0630] gi|315580504|gb|EFU92695.1| thymidylate synthase [Enterococcus faecalis TX0309A] gi|327535148|gb|AEA93982.1| thymidylate synthase [Enterococcus faecalis OG1RF] Length = 315 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|313246913|emb|CBY35764.1| unnamed protein product [Oikopleura dioica] Length = 294 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 137/284 (48%), Positives = 184/284 (64%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLD+ R++I G + DRTG GTRS FG QMRF L+ FPLLTTKK + + ELL Sbjct: 11 QQYLDICRNIIDNGHQKGDRTGTGTRSIFGGQMRFSLADNAFPLLTTKKTFLRGITEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------ 102 WF+RG +N L V IWD ++ +LGP+YG QWR + Sbjct: 71 WFIRGSTNAKELSDKKVRIWDANGSRAFLDSRGLHNREEWDLGPVYGFQWRHFGAKYGTM 130 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+ +++++R +P RR ++ AWN +D+MALPPCHCL QFYV NGKLS Sbjct: 131 HDDYTGKGVDQLQKVIETIRNNPNDRRMLMVAWNPVDLDEMALPPCHCLCQFYVANGKLS 190 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+L+T+M+A V + G+F+HTLGD H+YNNH +Q + Q+ Sbjct: 191 CQLYQRSCDMGLGVPFNIASYALMTIMIAHVTNLEPGDFVHTLGDAHVYNNHIDQLEEQI 250 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +R PR P+M I + D+ SF+ EDF L YEP+ AI ++V Sbjct: 251 ARVPRKFPKMKITRKVEDIESFKMEDFELSEYEPYPAIKMPMAV 294 >gi|152975426|ref|YP_001374943.1| thymidylate synthase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189036926|sp|A7GP90|TYSY_BACCN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|152024178|gb|ABS21948.1| Thymidylate synthase [Bacillus cytotoxicus NVH 391-98] Length = 318 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 193/313 (61%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL +H +IW+EWA K+ Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKNWVESDEYKGPDMTNFGLRSQEDEAFKTQYDEQME 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR+W G IDQ+ +++ ++ P SRR IVS Sbjct: 126 IFKKNVLEDDEFARKYGYLGDVYGKQWRAWKTAAGETIDQLKDVIEMIKKTPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A Sbjct: 186 AWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G GEF+HT+GD H+Y NHFEQ QL+R PR P + +N ++ + F D T+ Sbjct: 246 CGLAVGEFVHTIGDAHIYTNHFEQVKKQLAREPRPFPTLKLNSDVKSVFDFEMGDLTIEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 306 YDPHPAIKAPVAV 318 >gi|77550896|gb|ABA93693.1| Bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed [Oryza sativa Japonica Group] Length = 521 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 129/283 (45%), Positives = 176/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL+L+ +I+ G+ + DRTG GT S FG QMRF+L FPLLTTKKV W+ VV ELLW Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F+ G ++ L G+ IWD ++G+LGP+YG QWR + Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + + KMALPPCH QFYV++G+LSC Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVESGELSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G GEF+H +GD H+Y H + Q+ Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAHVCGLSPGEFVHVIGDAHVYRTHVRALEEQIQ 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP D+ SF DF L Y+PH I K+++ Sbjct: 479 KLPKPFPVLKINPLKKDIDSFVASDFKLVGYDPHQKIEMKMAI 521 >gi|255264088|ref|ZP_05343430.1| thymidylate synthase [Thalassiobium sp. R2A62] gi|255106423|gb|EET49097.1| thymidylate synthase [Thalassiobium sp. R2A62] Length = 268 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 146/268 (54%), Positives = 197/268 (73%), Gaps = 4/268 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D L +++ G DRTG GT S FG Q R+ ++ GFPL+TTKK+H +S++HELL Sbjct: 1 MQQYHDALATILETGIRSSDRTGTGTISCFGMQQRYAMADGFPLVTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV----IDQISSIV 116 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR +P D +DQI+ +V Sbjct: 61 WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGRQWRQFPRIDPQGGIASVDQITDLV 120 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 ++RA P SRR IVSAWN + MALPPCH L+Q + +GKL QLYQRS D+FLG+PF Sbjct: 121 DAIRATPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRILDGKLHLQLYQRSADMFLGVPF 180 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 NIASY+LL +MLA V G++ G+F+HTLGD H+Y+NH EQ +LQLSR+P+TLP + + ++ Sbjct: 181 NIASYALLQLMLAHVTGYEVGDFVHTLGDAHIYSNHMEQVELQLSRTPKTLPIIRLTRDV 240 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + F++EDF + Y+PH AI A V+V Sbjct: 241 GSIFDFKFEDFEVVGYDPHPAIRAPVAV 268 >gi|256961912|ref|ZP_05566083.1| thymidylate synthase [Enterococcus faecalis Merz96] gi|257085168|ref|ZP_05579529.1| thymidylate synthase [Enterococcus faecalis Fly1] gi|293382980|ref|ZP_06628898.1| thymidylate synthase [Enterococcus faecalis R712] gi|293389531|ref|ZP_06633988.1| thymidylate synthase [Enterococcus faecalis S613] gi|312907549|ref|ZP_07766540.1| thymidylate synthase [Enterococcus faecalis DAPTO 512] gi|312910167|ref|ZP_07769014.1| thymidylate synthase [Enterococcus faecalis DAPTO 516] gi|256952408|gb|EEU69040.1| thymidylate synthase [Enterococcus faecalis Merz96] gi|256993198|gb|EEU80500.1| thymidylate synthase [Enterococcus faecalis Fly1] gi|291079645|gb|EFE17009.1| thymidylate synthase [Enterococcus faecalis R712] gi|291081148|gb|EFE18111.1| thymidylate synthase [Enterococcus faecalis S613] gi|310626577|gb|EFQ09860.1| thymidylate synthase [Enterococcus faecalis DAPTO 512] gi|311289440|gb|EFQ67996.1| thymidylate synthase [Enterococcus faecalis DAPTO 516] Length = 315 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDAILNDEEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|229545808|ref|ZP_04434533.1| thymidylate synthase [Enterococcus faecalis TX1322] gi|256853140|ref|ZP_05558510.1| thymidylate synthase [Enterococcus faecalis T8] gi|300861235|ref|ZP_07107322.1| thymidylate synthase [Enterococcus faecalis TUSoD Ef11] gi|307291981|ref|ZP_07571850.1| thymidylate synthase [Enterococcus faecalis TX0411] gi|229309120|gb|EEN75107.1| thymidylate synthase [Enterococcus faecalis TX1322] gi|256711599|gb|EEU26637.1| thymidylate synthase [Enterococcus faecalis T8] gi|295112995|emb|CBL31632.1| thymidylate synthase [Enterococcus sp. 7L76] gi|300850274|gb|EFK78024.1| thymidylate synthase [Enterococcus faecalis TUSoD Ef11] gi|306496979|gb|EFM66527.1| thymidylate synthase [Enterococcus faecalis TX0411] gi|315029370|gb|EFT41302.1| thymidylate synthase [Enterococcus faecalis TX4000] gi|315145054|gb|EFT89070.1| thymidylate synthase [Enterococcus faecalis TX2141] gi|315160429|gb|EFU04446.1| thymidylate synthase [Enterococcus faecalis TX0645] Length = 315 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|319941408|ref|ZP_08015736.1| thymidylate synthase [Sutterella wadsworthensis 3_1_45B] gi|319805028|gb|EFW01858.1| thymidylate synthase [Sutterella wadsworthensis 3_1_45B] Length = 266 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 151/263 (57%), Positives = 197/263 (74%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QY LL+ + + G+ + DRTG GTRS FG QMRF L+ GFPL+TTKK+H +S+++ELLW Sbjct: 4 NQYETLLKDIYERGAHKSDRTGTGTRSLFGCQMRFPLADGFPLVTTKKLHLRSIIYELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL G +N+ YLH H V+IWDEWAD++GELGP+YG QWR+WP DG IDQIS +++ ++ Sbjct: 64 FLSGSTNIKYLHDHKVTIWDEWADENGELGPVYGRQWRAWPTSDGRTIDQISEVLERIKK 123 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P SRR +V+AWN A +DKMALPPCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIASY Sbjct: 124 NPDSRRLLVTAWNPAEVDKMALPPCHCLFQFYVADGRLSCQLYQRSCDMFLGVPFNIASY 183 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT M+A + G+F+ T GD H+Y+NH EQ LQLSR PR P+++I L Sbjct: 184 ALLTHMVAQQCDLEPGDFVWTGGDCHIYDNHLEQTALQLSREPRPYPKLVIKRRPASLFE 243 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + YEDF Y+P I A V+V Sbjct: 244 YEYEDFEFEGYDPWPGIKAPVAV 266 >gi|313224867|emb|CBY20659.1| unnamed protein product [Oikopleura dioica] Length = 294 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 135/284 (47%), Positives = 184/284 (64%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLD+ R++I G + DRTG GTRS FG QMRF L+ FPLLTTKK + + ELL Sbjct: 11 QQYLDICRNIIDNGHQKGDRTGTGTRSIFGGQMRFSLADNAFPLLTTKKTFLRGITEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------ 102 WF+RG +N L V IWD ++ +LGP+YG QWR + Sbjct: 71 WFIRGSTNAKELSDKKVRIWDANGSRAFLDSRGLHNREEWDLGPVYGFQWRHFGAKYGTM 130 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+ ++++++ +P RR ++ AWN +D+MALPPCHCL QFYV NGKLS Sbjct: 131 HDDYTGKGVDQLQKVIETIKNNPNDRRMLMVAWNPVDLDEMALPPCHCLCQFYVANGKLS 190 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+L+T+M+A V + G+F+HTLGD H+YNNH +Q + Q+ Sbjct: 191 CQLYQRSCDMGLGVPFNIASYALMTIMIAHVTNLEPGDFVHTLGDAHVYNNHIDQLEEQI 250 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +R PR P+M I + D+ +F+ EDF L YEP+ AI ++V Sbjct: 251 ARVPRKFPKMKITRKVEDIENFKMEDFELSEYEPYPAIKMPMAV 294 >gi|300113048|ref|YP_003759623.1| thymidylate synthase [Nitrosococcus watsonii C-113] gi|299538985|gb|ADJ27302.1| thymidylate synthase [Nitrosococcus watsonii C-113] Length = 264 Score = 361 bits (928), Expect = 4e-98, Method: Composition-based stats. Identities = 156/264 (59%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ G ++ DRTG GT S FG+QMRFDL +GFPL+TT+K+H +S+ ELL Sbjct: 1 MKPYLDLIQKILATGVEQDDRTGTGTWSIFGHQMRFDLRQGFPLVTTRKLHVRSIFIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP DG +DQ++ + +R Sbjct: 61 WFLRGETNVKYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGGYLDQMAKVSTQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P+SRRHIV A+N A +D+MALPPCH LFQFYV G+LSCQLYQRS DVFLG PFNIAS Sbjct: 121 HYPHSRRHIVVAYNPACVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGTPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT ++A G GEFI T GDVHLY NH E A LQL+R P LP++ I L Sbjct: 181 YALLTHLMAQQCGLGVGEFIWTGGDVHLYRNHLEAARLQLTREPLPLPRLQIKRRPSSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++Y+D + Y+ + AI A VSV Sbjct: 241 EYQYDDLEIVDYQSYPAIKAAVSV 264 >gi|13096424|pdb|1HW3|A Chain A, Structure Of Human Thymidylate Synthase Suggests Advantages Of Chemotherapy With Noncompetitive Inhibitors gi|66361120|pdb|1YPV|A Chain A, Structure Of Human Thymidylate Synthase At Low Salt Conditions gi|146387619|pdb|2ONB|A Chain A, Human Thymidylate Synthase At Low Salt Conditions With Pdpa Bound Length = 313 Score = 361 bits (927), Expect = 5e-98, Method: Composition-based stats. Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPP H L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPXHALXQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|163745997|ref|ZP_02153356.1| Thymidylate synthase [Oceanibulbus indolifex HEL-45] gi|161380742|gb|EDQ05152.1| Thymidylate synthase [Oceanibulbus indolifex HEL-45] Length = 277 Score = 361 bits (927), Expect = 5e-98, Method: Composition-based stats. Identities = 149/277 (53%), Positives = 196/277 (70%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY D LR V+ G DRTG GT S FG Q R+ ++ GFPL+TTKK+H KS+VHELL Sbjct: 1 MKQYHDALREVLDQGVTSTDRTGTGTISHFGMQQRYRMADGFPLVTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107 WFL GD+N++YL ++GVSIW+EWAD+DG+LGP+YG QWR +P + Sbjct: 61 WFLAGDTNIAYLRQNGVSIWNEWADEDGDLGPVYGHQWRRFPMVGEPMPQPDGTVLHRAG 120 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQI+ +V ++RA P SRR IVSAWN +D+MALPPCH L+Q + GKL QLYQRS Sbjct: 121 QVDQIAKLVDAIRATPDSRRLIVSAWNPGEVDQMALPPCHTLWQVRIAGGKLHLQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LL MLA V G+ G+F+H++GD H+Y+NH EQ QL+R+P+ L Sbjct: 181 ADMFLGVPFNIASYALLLEMLAHVTGYAPGDFVHSMGDAHIYSNHVEQVQTQLARTPKAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ IN + + FRYEDFT Y+P+ AI A V+V Sbjct: 241 PKLRINRKVSSIFDFRYEDFTFDGYDPNPAIKAPVAV 277 >gi|195342137|ref|XP_002037658.1| GM18183 [Drosophila sechellia] gi|194132508|gb|EDW54076.1| GM18183 [Drosophila sechellia] Length = 321 Score = 361 bits (927), Expect = 5e-98, Method: Composition-based stats. Identities = 140/286 (48%), Positives = 183/286 (63%), Gaps = 23/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+ YLDLLRH+I G R DRT VGT S FG QMRFD+ FPLLTTK+V +++V ELL Sbjct: 37 MN-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+ G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 96 WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRVVGDLGPVYGFQWRHFGAQYGTC 155 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158 +Y G IDQ+ ++ ++R P RR I+SAWN I KMALPPCHCL QFYV G+ Sbjct: 156 DDNYSGKGIDQLRQVIDTIRNKPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGE 215 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P++II + D+ FR+EDF + Y PH I +++V Sbjct: 276 QLQRTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPHPKIKMEMAV 321 >gi|222617018|gb|EEE53150.1| hypothetical protein OsJ_35972 [Oryza sativa Japonica Group] Length = 521 Score = 361 bits (927), Expect = 6e-98, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L + FPLLTTK+V W+ V+ ELLW Sbjct: 239 YQYLNLVQDIIRNGAKKNDRTGTGTVSKFGCQMRFNLRRNFPLLTTKRVFWRGVLEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G +N L G+ IWD A ++G+LGP+YG QWR + Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASRQYLDSIGLTQREEGDLGPVYGFQWRHFGAEYTDMH 358 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + KMALPPCH QFYV+NG+LSC Sbjct: 359 ADYVGKGFDQLMDVIDKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G+F+H +GD H+Y H E + Q+ Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGDFVHVIGDAHVYRTHVEALEEQMR 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP D+ SF DF L Y+PH I K++V Sbjct: 479 KQPKPFPILKINPVKKDIDSFVTSDFKLVRYDPHHKIEMKMAV 521 >gi|327332419|gb|EGE74155.1| thymidylate synthase [Propionibacterium acnes HL097PA1] Length = 270 Score = 361 bits (926), Expect = 6e-98, Method: Composition-based stats. Identities = 160/270 (59%), Positives = 200/270 (74%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG IDQI+ +V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDGGTIDQIAKVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV LSCQLYQRSGD FLG+ Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270 >gi|118497833|ref|YP_898883.1| thymidylate synthase [Francisella tularensis subsp. novicida U112] gi|134301752|ref|YP_001121720.1| thymidylate synthase [Francisella tularensis subsp. tularensis WY96-3418] gi|187931486|ref|YP_001891470.1| thymidylate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|194323806|ref|ZP_03057582.1| thymidylate synthase [Francisella tularensis subsp. novicida FTE] gi|208779897|ref|ZP_03247241.1| thymidylate synthase [Francisella novicida FTG] gi|254373190|ref|ZP_04988679.1| thymidylate synthase [Francisella tularensis subsp. novicida GA99-3549] gi|254374644|ref|ZP_04990125.1| thymidylate synthase [Francisella novicida GA99-3548] gi|166231701|sp|A0Q7B4|TYSY_FRATN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231702|sp|A4IXE8|TYSY_FRATW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|118423739|gb|ABK90129.1| thymidylate synthase [Francisella novicida U112] gi|134049529|gb|ABO46600.1| thymidylate synthase [Francisella tularensis subsp. tularensis WY96-3418] gi|151570917|gb|EDN36571.1| thymidylate synthase [Francisella novicida GA99-3549] gi|151572363|gb|EDN38017.1| thymidylate synthase [Francisella novicida GA99-3548] gi|187712395|gb|ACD30692.1| thymidylate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|194322170|gb|EDX19652.1| thymidylate synthase [Francisella tularensis subsp. novicida FTE] gi|208744352|gb|EDZ90652.1| thymidylate synthase [Francisella novicida FTG] gi|332678547|gb|AEE87676.1| Thymidylate synthase [Francisella cf. novicida Fx1] Length = 274 Score = 361 bits (926), Expect = 7e-98, Method: Composition-based stats. Identities = 150/277 (54%), Positives = 186/277 (67%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ + G + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLKYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL+ + V IW+EWA DGELGPIYG QWR + +G IDQI+ ++Q L+ Sbjct: 61 WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWRDF---NGQGIDQIADVIQMLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN ++ ALPPCH +FQFYV N KLSC L QRS Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF +Y H AI AK+SV Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274 >gi|257867789|ref|ZP_05647442.1| thymidylate synthase [Enterococcus casseliflavus EC30] gi|257874116|ref|ZP_05653769.1| thymidylate synthase [Enterococcus casseliflavus EC10] gi|257801872|gb|EEV30775.1| thymidylate synthase [Enterococcus casseliflavus EC30] gi|257808280|gb|EEV37102.1| thymidylate synthase [Enterococcus casseliflavus EC10] Length = 315 Score = 361 bits (926), Expect = 7e-98, Method: Composition-based stats. Identities = 149/315 (47%), Positives = 186/315 (59%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL R ++ G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V + + EL Sbjct: 1 MEQAYLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86 LWFL+GD+N+ YL H IWDEWA + Sbjct: 61 LWFLKGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHE 120 Query: 87 -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 G+LG +YG QWR W G IDQI ++ ++ P SRR I Sbjct: 121 LKLFCEKILADDAFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIDMIKTTPDSRRLI 180 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 181 VSAWNPEDVPTMALPPCHTMFQFYVHKGRLSCQLYQRSADVFLGVPFNIASYALLTHLIA 240 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G + G+F+HTLGD HLY+NH EQ QL+RS R P + +NP + F ED TL Sbjct: 241 HETGLEVGDFVHTLGDAHLYSNHMEQMKEQLTRSVRPAPTLQLNPEKQSIFDFEMEDITL 300 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I A ++V Sbjct: 301 AGYDPHPTIKAPIAV 315 >gi|56708291|ref|YP_170187.1| thymidylate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670762|ref|YP_667319.1| thymidylate synthase [Francisella tularensis subsp. tularensis FSC198] gi|224457413|ref|ZP_03665886.1| thymidylate synthase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370775|ref|ZP_04986780.1| thymidylate synthase [Francisella tularensis subsp. tularensis FSC033] gi|254875112|ref|ZP_05247822.1| thymidylate synthase [Francisella tularensis subsp. tularensis MA00-2987] gi|62901196|sp|Q5NFK5|TYSY_FRATT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123063432|sp|Q14H07|TYSY_FRAT1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54113189|gb|AAV29228.1| NT02FT1259 [synthetic construct] gi|56604783|emb|CAG45862.1| thymidylate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321095|emb|CAL09245.1| thymidylate synthase [Francisella tularensis subsp. tularensis FSC198] gi|151569018|gb|EDN34672.1| thymidylate synthase [Francisella tularensis subsp. tularensis FSC033] gi|254841111|gb|EET19547.1| thymidylate synthase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159521|gb|ADA78912.1| thymidylate synthase [Francisella tularensis subsp. tularensis NE061598] Length = 274 Score = 361 bits (926), Expect = 8e-98, Method: Composition-based stats. Identities = 150/277 (54%), Positives = 186/277 (67%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ + G + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H SVVHELL Sbjct: 1 MQEYLNFLKYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL+ + V IW+EWA DGELGPIYG QWR + +G IDQI+ ++Q L+ Sbjct: 61 WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWRDF---NGQGIDQIADVIQMLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN ++ ALPPCH +FQFYV N KLSC L QRS Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTNMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF +Y H AI AK+SV Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274 >gi|18859519|ref|NP_571835.1| thymidylate synthase [Danio rerio] gi|9795378|gb|AAF97476.1| thymidylate synthase [Danio rerio] Length = 319 Score = 361 bits (926), Expect = 8e-98, Method: Composition-based stats. Identities = 126/281 (44%), Positives = 175/281 (62%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +++ G+ + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 39 YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 +G +N L GV IWD ++G+LGP+YG QWR + D Sbjct: 99 KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 158 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ +++++P RR I+ AWN + MALPPCH L QFYV NG+LSCQL Sbjct: 159 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 218 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E Q+ R Sbjct: 219 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 278 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F EDF + Y+PH I +++V Sbjct: 279 PRPFPKLRIKRKVEQINDFCAEDFEIYDYDPHPTIKMQMAV 319 >gi|257876680|ref|ZP_05656333.1| thymidylate synthase [Enterococcus casseliflavus EC20] gi|257810846|gb|EEV39666.1| thymidylate synthase [Enterococcus casseliflavus EC20] Length = 315 Score = 360 bits (925), Expect = 9e-98, Method: Composition-based stats. Identities = 149/315 (47%), Positives = 186/315 (59%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL R ++ G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V + + EL Sbjct: 1 MEQAYLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86 LWFL+GD+N+ YL H IWDEWA + Sbjct: 61 LWFLKGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHE 120 Query: 87 -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 G+LG +YG QWR W G IDQI ++ ++ P SRR I Sbjct: 121 LKLFCEKILADDAFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIDMIKTTPDSRRLI 180 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 181 VSAWNPEDVPTMALPPCHTMFQFYVHEGRLSCQLYQRSADVFLGVPFNIASYALLTHLIA 240 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G + G+F+HTLGD HLY+NH EQ QL+RS R P + +NP + F ED TL Sbjct: 241 HETGLEVGDFVHTLGDAHLYSNHMEQMKEQLTRSVRPAPTLQLNPEKQSIFDFEMEDITL 300 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I A ++V Sbjct: 301 AGYDPHPTIKAPIAV 315 >gi|256032568|pdb|3EGY|X Chain X, Crystal Structure Of Human Thymidyalte Synthase A191k With Loop 181-197 Stabilized In The Inactive Conformation Length = 313 Score = 360 bits (925), Expect = 9e-98, Method: Composition-based stats. Identities = 129/282 (45%), Positives = 174/282 (61%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + M LPP H L QFYV N +LSCQ Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMKLPPXHALXQFYVVNSELSCQ 211 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313 >gi|224283792|ref|ZP_03647114.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171] Length = 256 Score = 360 bits (925), Expect = 9e-98, Method: Composition-based stats. Identities = 145/255 (56%), Positives = 182/255 (71%), Gaps = 5/255 (1%) Query: 14 FGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLH 73 G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL+G SNV +L Sbjct: 3 EGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFLKGSSNVRWLQ 62 Query: 74 RHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADPYSRRHI 129 H V IWD+WAD++G+LGP+YGVQWRSWP IDQI +++ +R P SRR + Sbjct: 63 EHNVHIWDDWADENGDLGPVYGVQWRSWPAPTSEDPNRTIDQIGNVLDLIRNHPDSRRMV 122 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIASYSLLTMM+A Sbjct: 123 VSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIASYSLLTMMIA 182 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G + GEF+ T GD H+Y+NH +Q QLSR P P++ I L ++YEDFT+ Sbjct: 183 QQTGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEI-RKADSLFDYQYEDFTI 241 Query: 250 RSYEPHAAILAKVSV 264 Y H I A V+V Sbjct: 242 VDYRHHPTIKAPVAV 256 >gi|257086729|ref|ZP_05581090.1| thymidylate synthase [Enterococcus faecalis D6] gi|256994759|gb|EEU82061.1| thymidylate synthase [Enterococcus faecalis D6] gi|315027251|gb|EFT39183.1| thymidylate synthase [Enterococcus faecalis TX2137] Length = 315 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|256958995|ref|ZP_05563166.1| thymidylate synthase [Enterococcus faecalis DS5] gi|256949491|gb|EEU66123.1| thymidylate synthase [Enterococcus faecalis DS5] Length = 315 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTTFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|289427821|ref|ZP_06429530.1| thymidylate synthase [Propionibacterium acnes J165] gi|295131194|ref|YP_003581857.1| thymidylate synthase [Propionibacterium acnes SK137] gi|289159003|gb|EFD07198.1| thymidylate synthase [Propionibacterium acnes J165] gi|291375426|gb|ADD99280.1| thymidylate synthase [Propionibacterium acnes SK137] gi|313773259|gb|EFS39225.1| thymidylate synthase [Propionibacterium acnes HL074PA1] gi|313793458|gb|EFS41509.1| thymidylate synthase [Propionibacterium acnes HL110PA1] gi|313801143|gb|EFS42406.1| thymidylate synthase [Propionibacterium acnes HL110PA2] gi|313812065|gb|EFS49779.1| thymidylate synthase [Propionibacterium acnes HL083PA1] gi|313819227|gb|EFS56941.1| thymidylate synthase [Propionibacterium acnes HL046PA2] gi|313821101|gb|EFS58815.1| thymidylate synthase [Propionibacterium acnes HL036PA1] gi|313823473|gb|EFS61187.1| thymidylate synthase [Propionibacterium acnes HL036PA2] gi|313827024|gb|EFS64738.1| thymidylate synthase [Propionibacterium acnes HL063PA1] gi|313829862|gb|EFS67576.1| thymidylate synthase [Propionibacterium acnes HL007PA1] gi|313834704|gb|EFS72418.1| thymidylate synthase [Propionibacterium acnes HL056PA1] gi|313837927|gb|EFS75641.1| thymidylate synthase [Propionibacterium acnes HL086PA1] gi|314925914|gb|EFS89745.1| thymidylate synthase [Propionibacterium acnes HL036PA3] gi|314960889|gb|EFT04990.1| thymidylate synthase [Propionibacterium acnes HL002PA2] gi|314963347|gb|EFT07447.1| thymidylate synthase [Propionibacterium acnes HL082PA1] gi|314974024|gb|EFT18120.1| thymidylate synthase [Propionibacterium acnes HL053PA1] gi|314975450|gb|EFT19545.1| thymidylate synthase [Propionibacterium acnes HL045PA1] gi|314979451|gb|EFT23545.1| thymidylate synthase [Propionibacterium acnes HL072PA2] gi|314984210|gb|EFT28302.1| thymidylate synthase [Propionibacterium acnes HL005PA1] gi|314988435|gb|EFT32526.1| thymidylate synthase [Propionibacterium acnes HL005PA2] gi|314988646|gb|EFT32737.1| thymidylate synthase [Propionibacterium acnes HL005PA3] gi|315079373|gb|EFT51371.1| thymidylate synthase [Propionibacterium acnes HL053PA2] gi|315079992|gb|EFT51968.1| thymidylate synthase [Propionibacterium acnes HL078PA1] gi|315083399|gb|EFT55375.1| thymidylate synthase [Propionibacterium acnes HL027PA2] gi|315086806|gb|EFT58782.1| thymidylate synthase [Propionibacterium acnes HL002PA3] gi|315089453|gb|EFT61429.1| thymidylate synthase [Propionibacterium acnes HL072PA1] gi|315097776|gb|EFT69752.1| thymidylate synthase [Propionibacterium acnes HL038PA1] gi|327325399|gb|EGE67204.1| thymidylate synthase [Propionibacterium acnes HL096PA2] gi|327328262|gb|EGE70026.1| thymidylate synthase [Propionibacterium acnes HL096PA3] gi|327443692|gb|EGE90346.1| thymidylate synthase [Propionibacterium acnes HL043PA1] gi|327449229|gb|EGE95883.1| thymidylate synthase [Propionibacterium acnes HL043PA2] gi|327450177|gb|EGE96831.1| thymidylate synthase [Propionibacterium acnes HL013PA2] gi|327451241|gb|EGE97895.1| thymidylate synthase [Propionibacterium acnes HL092PA1] gi|328756767|gb|EGF70383.1| thymidylate synthase [Propionibacterium acnes HL020PA1] gi|328761041|gb|EGF74593.1| thymidylate synthase [Propionibacterium acnes HL099PA1] gi|332676071|gb|AEE72887.1| thymidylate synthase [Propionibacterium acnes 266] Length = 270 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD G IDQI+ +V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV LSCQLYQRSGD FLG+ Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270 >gi|148244715|ref|YP_001219409.1| thymidylate synthase [Candidatus Vesicomyosocius okutanii HA] gi|166231742|sp|A5CWK3|TYSY_VESOH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|146326542|dbj|BAF61685.1| thymidylate synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 264 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 148/264 (56%), Positives = 190/264 (71%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L+ V G + DRT GT S FGYQMRFDLSKGFPL+TTK VH SVV+ELL Sbjct: 1 MKQYLDFLKLVKNIGVYKTDRTNTGTTSMFGYQMRFDLSKGFPLVTTKHVHLPSVVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GV IW+EWAD++G+LGP+YG QWR W + IDQIS +V+ ++ Sbjct: 61 WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGTQWRHWKNIKDKSIDQISKVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWNV ++ MALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 NTPNSRRIIVSAWNVGELENMALPPCHVFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A + G+FI + GD H+Y+NH++Q ++QLSR+P+ L + I ++ Sbjct: 181 YSLLTHMMAQQCDLEVGDFIWSGGDCHIYSNHYKQVEIQLSRTPKALATLKIKRKPENIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF +Y A I A V++ Sbjct: 241 DYSFEDFEFVNYIFDAPIKAPVAI 264 >gi|29124532|gb|AAH49026.1| Tyms protein [Danio rerio] Length = 319 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 126/281 (44%), Positives = 175/281 (62%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +++ G+ + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 39 YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 +G +N L GV IWD ++G+LGP+YG QWR + D Sbjct: 99 KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 158 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ +++++P RR I+ AWN + MALPPCH L QFYV NG+LSCQL Sbjct: 159 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 218 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E Q+ R Sbjct: 219 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 278 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F EDF + Y+PH I +++V Sbjct: 279 PRPFPKLRIKRKVEQINDFCAEDFEIYDYDPHPTIKMQMAV 319 >gi|307271003|ref|ZP_07552286.1| thymidylate synthase [Enterococcus faecalis TX4248] gi|307289121|ref|ZP_07569077.1| thymidylate synthase [Enterococcus faecalis TX0109] gi|306499830|gb|EFM69191.1| thymidylate synthase [Enterococcus faecalis TX0109] gi|306512501|gb|EFM81150.1| thymidylate synthase [Enterococcus faecalis TX4248] gi|315036993|gb|EFT48925.1| thymidylate synthase [Enterococcus faecalis TX0027] gi|315164030|gb|EFU08047.1| thymidylate synthase [Enterococcus faecalis TX1302] gi|323480739|gb|ADX80178.1| thymidylate synthase [Enterococcus faecalis 62] Length = 315 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|294790621|ref|ZP_06755779.1| thymidylate synthase [Scardovia inopinata F0304] gi|294458518|gb|EFG26871.1| thymidylate synthase [Scardovia inopinata F0304] Length = 290 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 148/265 (55%), Positives = 187/265 (70%), Gaps = 5/265 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL+R +++ GS + DRTG GT S FG QMRF+L FPLLTTK V ++ + +ELLWFL Sbjct: 27 YEDLVRLILETGSLKSDRTGTGTISLFGRQMRFNLEDSFPLLTTKTVFFRGIAYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119 +G SNV +L + V IWDEWAD DG LGP+YGVQWRSWP D IDQIS+++ + Sbjct: 87 KGSSNVRWLQENRVHIWDEWADADGNLGPVYGVQWRSWPAPTADNPNRTIDQISTVLNLI 146 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 + P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA Sbjct: 147 KNQPDSRRMIVSAWNPAEVENMALPPCHTLFQFYVADGKLSCQLYQRSADMFLGVPFNIA 206 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYSLLT M+A + GEF+ T GD H+Y+NH +Q QLSR P PQ+ I+ + Sbjct: 207 SYSLLTAMMAQQADLKPGEFVWTGGDCHIYDNHVDQVLEQLSRQPYPYPQLKID-KADTI 265 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++YEDF + +Y+ H I A V+V Sbjct: 266 FDYKYEDFHILNYQHHPKITAPVAV 290 >gi|110808211|sp|Q2QRX6|DRTS_ORYSJ RecName: Full=Putative bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|108862630|gb|ABA98037.2| Bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed [Oryza sativa Japonica Group] gi|215769248|dbj|BAH01477.1| unnamed protein product [Oryza sativa Japonica Group] gi|218186783|gb|EEC69210.1| hypothetical protein OsI_38205 [Oryza sativa Indica Group] Length = 494 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L + FPLLTTK+V W+ V+ ELLW Sbjct: 212 YQYLNLVQDIIRNGAKKNDRTGTGTVSKFGCQMRFNLRRNFPLLTTKRVFWRGVLEELLW 271 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G +N L G+ IWD A ++G+LGP+YG QWR + Sbjct: 272 FISGSTNAKVLQEKGIHIWDGNASRQYLDSIGLTQREEGDLGPVYGFQWRHFGAEYTDMH 331 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + KMALPPCH QFYV+NG+LSC Sbjct: 332 ADYVGKGFDQLMDVIDKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 391 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G+F+H +GD H+Y H E + Q+ Sbjct: 392 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGDFVHVIGDAHVYRTHVEALEEQMR 451 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P+ P + INP D+ SF DF L Y+PH I K++V Sbjct: 452 KQPKPFPILKINPVKKDIDSFVTSDFKLVRYDPHHKIEMKMAV 494 >gi|255324809|ref|ZP_05365922.1| thymidylate synthase [Corynebacterium tuberculostearicum SK141] gi|255298109|gb|EET77413.1| thymidylate synthase [Corynebacterium tuberculostearicum SK141] Length = 267 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 147/261 (56%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL+ V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++ +V+ ELLWFL Sbjct: 8 YEDLLKKVLETGTPKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHAVLGELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G+SN+ +L + V IW+EWAD +GELGP+YGVQWRSWP DG IDQI + +L +P Sbjct: 68 KGESNIKFLQDNKVRIWNEWADDNGELGPVYGVQWRSWPTPDGQHIDQIQQALDTLNNNP 127 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR++VSAWNVA +DKMAL PCH LFQ YV +G LS Q+YQRS D+FLG+PFNIASY+ Sbjct: 128 DSRRNLVSAWNVADLDKMALMPCHLLFQLYVADGTLSMQVYQRSADMFLGVPFNIASYAA 187 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M A G + GE I T GD H+YN+H EQ QLSR PR PQ+ ++ D+ S+ Sbjct: 188 LTHMFAQQAGLKVGELIWTGGDCHIYNDHVEQVKEQLSREPRPYPQLNLH-KAEDMFSYD 246 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + DF + Y+PH I A+VSV Sbjct: 247 FADFEIEGYDPHPTIKAQVSV 267 >gi|241106587|ref|XP_002410061.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] gi|215492873|gb|EEC02514.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] Length = 301 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 137/284 (48%), Positives = 182/284 (64%), Gaps = 25/284 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLD L H++K G + DRTG GT S FG Q R+ L+ G PLLTTK+V W+ VV ELL Sbjct: 22 YQYLDTLAHILKNGRQKGDRTGTGTISIFGAQCRYSLADGTMPLLTTKRVFWRGVVEELL 81 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG +N L GV IWD ++G+LGP+YG QWR + Sbjct: 82 WFLRGSTNAKELSERGVRIWDGNGSRQFLDSLGFVDREEGDLGPVYGFQWRHFGAPYRTM 141 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY +DQI +++++++ +P RR I+ +WN A + KMALPPCHCL QFYV +LS Sbjct: 142 RTDYGDEGVDQIKNLIETIKTNPNDRRMILCSWNPADLGKMALPPCHCLAQFYVYEDELS 201 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH + L Sbjct: 202 CQLYQRSADMGLGVPFNIASYALLTHMVAKVTGKRPGDFVHTLGDAHIYLNHVDA----L 257 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I ++ D+ FR+EDF + Y PH AI ++SV Sbjct: 258 EREPRPFPKLHIKRDVKDIFDFRFEDFEIVDYHPHPAIKMEMSV 301 >gi|41351139|gb|AAH65845.1| Tyms protein [Danio rerio] Length = 318 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 126/281 (44%), Positives = 174/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +++ G+ + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 38 YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 97 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 +G +N L GV IWD ++G+LGP+YG QWR + D Sbjct: 98 KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 157 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ +++++P RR I+ AWN + MALPPCH L QFYV NG+LSCQL Sbjct: 158 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 217 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E Q+ R Sbjct: 218 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 277 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F EDF + Y PH I +++V Sbjct: 278 PRPFPKLRIKRKVEQINDFCAEDFEIYDYNPHPTIKMQMAV 318 >gi|256832262|ref|YP_003160989.1| thymidylate synthase [Jonesia denitrificans DSM 20603] gi|256685793|gb|ACV08686.1| thymidylate synthase [Jonesia denitrificans DSM 20603] Length = 266 Score = 359 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 154/261 (59%), Positives = 190/261 (72%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL ++ G+ + DRTG GT S FG+QMRFDL +GFPL+TTKKVH KSVV ELLWFL Sbjct: 7 YEDLLALTLQHGTPKNDRTGTGTTSIFGHQMRFDLREGFPLITTKKVHLKSVVGELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG+SNV +L HG+ IW+EWAD GELGP+YGVQWRSWP DG+ IDQ+S +V +LR DP Sbjct: 67 RGESNVQWLQDHGIRIWNEWADARGELGPVYGVQWRSWPTPDGHHIDQLSQVVDTLRTDP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + KMAL PCH FQFYV +G LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRMLVSAWNVSELHKMALAPCHAFFQFYVADGTLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A GEFI T GD H+Y+NH Q + QL+R R P++ +N L + Sbjct: 187 LTHMVAQQTDLAVGEFIWTGGDCHIYDNHRSQVNEQLTRDVRPFPRLELNRA-DSLFDYC 245 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 ++D + YEPH I A V+V Sbjct: 246 FDDVVVHDYEPHPTIRASVAV 266 >gi|332185611|ref|ZP_08387359.1| thymidylate synthase [Sphingomonas sp. S17] gi|332014589|gb|EGI56646.1| thymidylate synthase [Sphingomonas sp. S17] Length = 264 Score = 359 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 149/264 (56%), Positives = 183/264 (69%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G + DRTG GT S FG+QMRFDL++GFP+LTTKK+H +S++ ELL Sbjct: 1 MRQYLDLMDRVLTQGVQQMDRTGTGTLSVFGHQMRFDLAQGFPVLTTKKLHLRSIIVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L VSIWDEWAD+ G+LGP+YG QWR W DG IDQI+ +++ +R Sbjct: 61 WFLRGDTNVRWLQEQKVSIWDEWADEAGDLGPVYGKQWRDWATADGRHIDQIAELIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN + MAL PCHCLFQ +V NG+LS QLYQRS D+FLG+PFNIAS Sbjct: 121 TQPASRRQIVSAWNPGDLHAMALAPCHCLFQTHVANGRLSLQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT MLA + GEFI T GD HLY NH EQA QL R P LP++ I + Sbjct: 181 YALLTHMLAQQCDLEVGEFIWTGGDCHLYLNHLEQARTQLGREPGALPRLEITRKPDAID 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + EDF L Y I A V++ Sbjct: 241 GYALEDFVLHDYVAQRHIKAVVAI 264 >gi|325571013|ref|ZP_08146585.1| thymidylate synthase [Enterococcus casseliflavus ATCC 12755] gi|325156098|gb|EGC68284.1| thymidylate synthase [Enterococcus casseliflavus ATCC 12755] Length = 315 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 150/315 (47%), Positives = 188/315 (59%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL R ++ G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V + + EL Sbjct: 1 MEQAYLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86 LWFL+GD+N+ YL H IWDEWA + Sbjct: 61 LWFLKGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHE 120 Query: 87 -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 G+LG +YG QWR W G IDQI +++ ++ P SRR I Sbjct: 121 LKQFCEKILSDDTFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIEMIKTTPDSRRLI 180 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV +G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 181 VSAWNPEDVPTMALPPCHTMFQFYVHDGRLSCQLYQRSADVFLGVPFNIASYALLTHLIA 240 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G + G+FIHTLGD HLY+NH EQ QL+RS R P + +NP + F ED TL Sbjct: 241 HETGLEVGDFIHTLGDAHLYSNHIEQMKEQLTRSVRPAPSLQLNPEKQSIFDFEMEDITL 300 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I A ++V Sbjct: 301 AGYDPHPTIKAPIAV 315 >gi|255975838|ref|ZP_05426424.1| thymidylate synthase [Enterococcus faecalis T2] gi|307278059|ref|ZP_07559143.1| thymidylate synthase [Enterococcus faecalis TX0860] gi|255968710|gb|EET99332.1| thymidylate synthase [Enterococcus faecalis T2] gi|306505456|gb|EFM74642.1| thymidylate synthase [Enterococcus faecalis TX0860] Length = 315 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLTKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K GELG IYG QWR W DG+ IDQ++++++ ++ +P SRR IVSAW Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+ Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304 Query: 254 PHAAILAKVSV 264 PH I A ++V Sbjct: 305 PHPTIKAPIAV 315 >gi|321468779|gb|EFX79762.1| hypothetical protein DAPPUDRAFT_304293 [Daphnia pulex] Length = 292 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 137/284 (48%), Positives = 186/284 (65%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL+L++++++ G+ + DRTG GTRS FG QMRF L G FPLLTTK+V W+ ++ ELL Sbjct: 9 HQYLNLIKNLLQNGNVKGDRTGTGTRSIFGAQMRFSLRSGRFPLLTTKRVFWRGLMEELL 68 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF+RG +N + L + IWD + ++G+LGPIYG QWR + Sbjct: 69 WFVRGSTNANELREKDIHIWDGNSSREFLDSLGLKDREEGDLGPIYGFQWRHFGANYDNM 128 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY +DQ+ +++ ++R +P RR I++AWN + + MALPPCHCL QFYV NG+LS Sbjct: 129 HSDYSCQGVDQLKNLINTIRTNPDDRRMILTAWNPSALPLMALPPCHCLAQFYVANGELS 188 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFNIASYSLLT M+A V G GEFIHTLGD H+YNNH + QL Sbjct: 189 CQMYQRSADMGLGVPFNIASYSLLTCMIAHVTGLNPGEFIHTLGDAHVYNNHISALEKQL 248 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I + D+ F+ +DF L Y+PH I ++V Sbjct: 249 ERQPRPFPTLKIIRKVSDIDDFKADDFVLEGYDPHPKIPMDMAV 292 >gi|254369108|ref|ZP_04985120.1| hypothetical protein FTAG_00039 [Francisella tularensis subsp. holarctica FSC022] gi|157122058|gb|EDO66198.1| hypothetical protein FTAG_00039 [Francisella tularensis subsp. holarctica FSC022] Length = 274 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 149/277 (53%), Positives = 185/277 (66%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ + G + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLKYIKENGVLKNDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL+ + V IW+EWA DGELGPIYG QWR + +G IDQI+ ++Q L+ Sbjct: 61 WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWRDF---NGQGIDQIADVIQMLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +V AWN ++ ALPPCH +FQFYV N KLSC L QRS Sbjct: 118 TNPNSRRILVLAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF +Y H AI AK+SV Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274 >gi|313808492|gb|EFS46957.1| thymidylate synthase [Propionibacterium acnes HL087PA2] Length = 270 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD G IDQI+ +V+ +R Sbjct: 61 WFLRGDTNVGWLHDNSIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV LSCQLYQRSGD FLG+ Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270 >gi|241668230|ref|ZP_04755808.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876765|ref|ZP_05249475.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842786|gb|EET21200.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 274 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 146/277 (52%), Positives = 189/277 (68%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ G+++ DRTG GT S FGYQMRFDL +GFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLKYIKDNGTNKGDRTGTGTTSIFGYQMRFDLQQGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +NV YL+ + V IW+EWA ++GELGPIYG QWR + +G IDQI+ +++ L+ Sbjct: 61 WFLSGSTNVKYLNDNKVRIWNEWATEEGELGPIYGKQWRDF---NGEGIDQIAEVIEMLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN ++ ALPPCH +FQFYV + KLSC L QRS Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVAKGNSALPPCHAMFQFYVADNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMIAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF ++Y+ H AI AK+SV Sbjct: 238 PTLKILRKPSSIFDYKYEDFEFQNYKHHPAIKAKISV 274 >gi|317420036|emb|CBN82072.1| Thymidylate synthase [Dicentrarchus labrax] Length = 325 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 127/281 (45%), Positives = 175/281 (62%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLD + ++++ G + DRTG G S FG Q R++L FPLLTTK+V WK ++ ELLWF+ Sbjct: 45 YLDQIEYIMEHGRRKGDRTGTGVVSVFGTQARYNLRDQFPLLTTKRVFWKGILEELLWFI 104 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103 +G +N L GV IWD +D G+LGP+YG QWR + D Sbjct: 105 KGSTNAKELSAKGVKIWDANGSRDFLDNLGFTDREEGDLGPVYGFQWRHFGAEYTNMHAD 164 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV + +LSCQL Sbjct: 165 YTGQGVDQLQKVIDTIKKNPEDRRIIMCAWNPKDMPNMALPPCHALCQFYVCDSELSCQL 224 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R Sbjct: 225 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYINHIEPLKVQLQRE 284 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ I + + FR EDF + Y PH AI +++V Sbjct: 285 IRPFPKLKILRKVESIDDFRAEDFEICDYNPHPAIKMQMAV 325 >gi|302797080|ref|XP_002980301.1| hypothetical protein SELMODRAFT_233517 [Selaginella moellendorffii] gi|300151917|gb|EFJ18561.1| hypothetical protein SELMODRAFT_233517 [Selaginella moellendorffii] Length = 509 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 125/282 (44%), Positives = 173/282 (61%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L FPLLTTK+V W+ VV ELLW Sbjct: 227 YQYLNLIKDIIETGNTKSDRTGTGTISKFGCQMRFNLRNSFPLLTTKRVFWRGVVEELLW 286 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G +N L G+ IW ++ +LGP+YG QWR + Sbjct: 287 FISGSTNAKVLEDKGIHIWKGNGSREYLDSIGLSEREENDLGPVYGFQWRHFGARYSTMH 346 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ P RR ++S+WN A + +MALPPCH QFYV NG+LSC Sbjct: 347 DDYTGQGVDQLAEVIDKIKNKPDDRRIVLSSWNPADLKQMALPPCHMFAQFYVSNGELSC 406 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT M+A V G+F+H LGD H+Y NH + QL Sbjct: 407 QMYQRSCDMGLGVPFNIASYALLTCMIAHVCDLAPGDFVHVLGDAHVYTNHVDPLKEQLE 466 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P+ P + I + D+ SF +DF L YE H I K++ Sbjct: 467 NVPKPFPILKIATSNKDIDSFTAKDFQLVDYESHQRIAMKMA 508 >gi|289425008|ref|ZP_06426787.1| thymidylate synthase [Propionibacterium acnes SK187] gi|289154707|gb|EFD03393.1| thymidylate synthase [Propionibacterium acnes SK187] Length = 270 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDKGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD G IDQI+ +V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV LSCQLYQRSGD FLG+ Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270 >gi|306818997|ref|ZP_07452714.1| thymidylate synthase [Mobiluncus mulieris ATCC 35239] gi|304648190|gb|EFM45498.1| thymidylate synthase [Mobiluncus mulieris ATCC 35239] Length = 266 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 136/263 (51%), Positives = 184/263 (69%), Gaps = 2/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DLLR +++ G + DRTG GTRS F Q+R+DLS+GFP +TTK ++W VV ELLW Sbjct: 6 HQYEDLLREILREGVPKDDRTGTGTRSLFARQLRYDLSQGFPAITTKSLYWHGVVGELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G++N ++L + + IWDEWAD DG LGP+YG QWR+WP G +DQI+ ++++L+ Sbjct: 66 FLQGNTNATWLQENNIHIWDEWADTDGNLGPVYGHQWRAWPTEAG-TVDQIAGLIETLKT 124 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV+ + +MAL PCH FQ +V G+LS Q+YQRS D+FLG+PFNIASY Sbjct: 125 DPSSRRMVVSAWNVSDLPRMALAPCHMFFQCWVGAGRLSLQIYQRSCDMFLGVPFNIASY 184 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA G + GE + T GD H+YNNH Q QLSR P P +I++ + Sbjct: 185 ALLTHMLAQQSGLEVGELVWTGGDCHIYNNHVNQVQEQLSRDPYPFPTLILD-QAQSIDD 243 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + +E L +Y+ H I A V+V Sbjct: 244 YTFEMIRLENYQHHPRISAPVAV 266 >gi|148654128|ref|YP_001281221.1| thymidylate synthase [Psychrobacter sp. PRwf-1] gi|172048593|sp|A5WHY0|TYSY_PSYWF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148573212|gb|ABQ95271.1| thymidylate synthase [Psychrobacter sp. PRwf-1] Length = 286 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 148/277 (53%), Positives = 194/277 (70%), Gaps = 16/277 (5%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL+R+V G+++ DRTG GTRS FG Q+RFDL GFPLLTTKKVH KS+ +EL WFL Sbjct: 10 YLDLIRYVRDHGTEKGDRTGTGTRSHFGAQLRFDLKDGFPLLTTKKVHMKSITYELFWFL 69 Query: 64 RGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DYDGN 107 +GD++V YL HGV IW+EW+ +GELGPIYG QWR++ Y+ + Sbjct: 70 KGDTHVKYLQDHGVRIWNEWSTAEQTARFGRPEGELGPIYGHQWRNYGATKAEDGRYNQD 129 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQ+ +++ ++++P SRR IVS WN A ++ALPPCH LFQF+V +GKLSCQLYQRS Sbjct: 130 GVDQVVEVIEQIKSNPNSRRLIVSGWNPAEATQVALPPCHTLFQFFVADGKLSCQLYQRS 189 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASYSLLT M+A V + GEFI T GD HLY NH +Q + QLSR L Sbjct: 190 ADLFLGVPFNIASYSLLTHMIAQVCDLEVGEFIWTGGDCHLYQNHIDQVNEQLSREAYEL 249 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ +NP I D+ F ++D + Y+ H AI A V+V Sbjct: 250 PKLWLNPEIKDIFDFTFDDIRVEGYQSHPAIKAPVAV 286 >gi|331006117|ref|ZP_08329451.1| Thymidylate synthase [gamma proteobacterium IMCC1989] gi|330420096|gb|EGG94428.1| Thymidylate synthase [gamma proteobacterium IMCC1989] Length = 277 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 137/277 (49%), Positives = 178/277 (64%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL ++ G + DRTG GT S FG Q R +L GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKAYLDLLDDILSNGVQKGDRTGTGTLSVFGRQYRHNLQDGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N +L +GVSIWDEWAD++G+LGP+YG QW +WP DG I+QI +V L+ Sbjct: 61 WFLKGDTNTQWLKENGVSIWDEWADENGDLGPLYGKQWTAWPTKDGGSINQIDYVVDCLK 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + MALPPCH L+QFYV N +LS QLY RS Sbjct: 121 NNPDSRRILFHGWNVEYLPDESVSPQENVKQGRMALPPCHLLYQFYVANNRLSAQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+P+N AS +LL MLA GE I + GD H+Y+NH EQ + QLSR PR L Sbjct: 181 SDSFLGLPYNTASLALLVHMLAQQCDLDVGEVIVSTGDSHIYSNHLEQVNTQLSREPRAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+ I + + ++DF + Y+ H AI A V+V Sbjct: 241 PQLTIKRKPASIYDYTFDDFEIIGYDAHPAIKAPVAV 277 >gi|297836680|ref|XP_002886222.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis lyrata subsp. lyrata] gi|297332062|gb|EFH62481.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis lyrata subsp. lyrata] Length = 515 Score = 358 bits (920), Expect = 4e-97, Method: Composition-based stats. Identities = 128/281 (45%), Positives = 169/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 235 YLNMVEDIISNGNAKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 294 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G +N L G+ IWD A ++G+LGP+YG QWR + D Sbjct: 295 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 354 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV G+LSCQ+ Sbjct: 355 YTGQGFDQLLDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 414 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT MLA V G+FIH +GD H+Y H QL Sbjct: 415 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVIGDAHVYKTHVRPLQEQLQNP 474 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP + SF DF L Y+PH I K++V Sbjct: 475 PKPFPVLKINPEKKQIDSFVAADFDLTGYDPHKKIEMKMAV 515 >gi|289209065|ref|YP_003461131.1| thymidylate synthase [Thioalkalivibrio sp. K90mix] gi|288944696|gb|ADC72395.1| thymidylate synthase [Thioalkalivibrio sp. K90mix] Length = 272 Score = 358 bits (920), Expect = 4e-97, Method: Composition-based stats. Identities = 155/277 (55%), Positives = 196/277 (70%), Gaps = 18/277 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RH+ G DR DRTG GTRS FGYQMRFDL+ GFPL+TTK+ H +SV+HELL Sbjct: 1 MQQYLDLVRHIRAHGIDRPDRTGTGTRSVFGYQMRFDLAAGFPLVTTKRTHLRSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF+RG++N+ YL H V IWDEWA + G+LGPIYG QWR+W + DQ++ +V +L+ Sbjct: 61 WFIRGETNIGYLKEHKVRIWDEWATEGGDLGPIYGAQWRNWAGH-----DQLAELVSNLK 115 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 PYSRRHI+SAWNVA + MAL PCH LFQFYV +G+LSCQLYQRS Sbjct: 116 NRPYSRRHIISAWNVADLPDESISPQENANAGRMALAPCHTLFQFYVADGRLSCQLYQRS 175 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIASY+L T MLA V + G+F+HT GD HLY+NH +Q D L R P L Sbjct: 176 ADVFLGVPFNIASYALFTHMLAQVADLEPGDFVHTFGDAHLYHNHEQQVDELLGREPLPL 235 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + +NP + DL +F ++D +R Y+ H I A V++ Sbjct: 236 PTLHLNPEVTDLFAFTFDDIEVRDYQSHPPIKAPVAI 272 >gi|262341260|ref|YP_003284115.1| thymidylate synthase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272597|gb|ACY40505.1| thymidylate synthase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 264 Score = 358 bits (920), Expect = 4e-97, Method: Composition-based stats. Identities = 151/264 (57%), Positives = 208/264 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL++V+K G R+DRTG+GT S FG+QMRF+L KGFPLLTTKK++ +S+++ELL Sbjct: 1 MKQYLNLLKNVLKNGIKRKDRTGIGTISIFGHQMRFNLEKGFPLLTTKKLNIRSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL H VSIW+EWAD++GELGPIYG+QWR WP Y+G+ IDQI+++++ ++ Sbjct: 61 WFLKGDTNIQYLKDHQVSIWNEWADQNGELGPIYGLQWRKWPTYNGHFIDQIANLIEEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVS+WNV +I MALPPCH LFQFYV KLS LYQRS D+F+G+PFNIAS Sbjct: 121 FNPNSRRLIVSSWNVGMIQNMALPPCHLLFQFYVSEKKLSLLLYQRSADIFIGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL MLA ++ + E IH +GD H+YNNH +Q LQ+ RSPR LP++I+NP++ ++ Sbjct: 181 YALLLTMLAKILNLKEKELIHIIGDAHIYNNHIQQVKLQMKRSPRPLPKIILNPSVKNIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F ++DF L++Y P I V++ Sbjct: 241 EFCFDDFQLKNYNPFPHIKGDVAI 264 >gi|261749228|ref|YP_003256913.1| thymidylate synthase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497320|gb|ACX83770.1| thymidylate synthase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 279 Score = 358 bits (920), Expect = 4e-97, Method: Composition-based stats. Identities = 153/265 (57%), Positives = 209/265 (78%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL++V+K G + DRTG+GT+S FG QMRF+L KGFPLLTTKK+ +S+++ELL Sbjct: 15 MEQYLDLLKNVLKNGIKKMDRTGIGTKSLFGSQMRFNLKKGFPLLTTKKLSIRSIIYELL 74 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G +N+ YL + VSIW+EWA+++G+LGPIYG+QWR WP YDG+ IDQI+++++ ++ Sbjct: 75 WFLKGYTNIQYLKENKVSIWNEWANENGDLGPIYGLQWRKWPAYDGHFIDQITNLIKEIK 134 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSCQLYQRSGDVFLGIPFNIA 179 ++P+SRR IVS+WNV +I +M LPPCH LFQFYV K LS QLYQRS D+FLG+PFNIA Sbjct: 135 SNPHSRRLIVSSWNVGMIQEMRLPPCHLLFQFYVSEKKQLSLQLYQRSADIFLGLPFNIA 194 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LL M+A + F EFIHT+GD H+YNNH EQ LQ+ R P+ LP++++NP++ ++ Sbjct: 195 SYALLLTMVAKTLNFIAKEFIHTIGDAHIYNNHIEQVKLQIQRPPKPLPKILLNPSVKNV 254 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 L F +EDF L +Y PH I V+V Sbjct: 255 LDFSFEDFKLINYNPHPHIKGDVAV 279 >gi|313886932|ref|ZP_07820635.1| thymidylate synthase [Porphyromonas asaccharolytica PR426713P-I] gi|312923629|gb|EFR34435.1| thymidylate synthase [Porphyromonas asaccharolytica PR426713P-I] Length = 265 Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats. Identities = 158/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G++R DRTG GT FG+QM FDL+ GFPLLTTKK+H +S++HELL Sbjct: 1 MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119 WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G IDQ+ + + Sbjct: 61 WFLKGDTNLQYLHDNKVSIWDEWADETGDLGPIYGAQWRHWFDPHTGQTIDQMQQAIDLI 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWNVA + M L PCHCL Q+YV KL QLYQRS D+FLG+PFNIA Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGNKLDLQLYQRSADIFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M + L Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F Y+DFTL Y P+ I A VSV Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSV 265 >gi|332184365|gb|AEE26619.1| Thymidylate synthase [Francisella cf. novicida 3523] Length = 274 Score = 358 bits (919), Expect = 5e-97, Method: Composition-based stats. Identities = 149/277 (53%), Positives = 186/277 (67%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L ++ + G + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLNYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL+ + V IW+EWA DGELGPIYG QWR + +G IDQI+ ++Q L+ Sbjct: 61 WFLSGSTNIKYLNDNNVRIWNEWATSDGELGPIYGKQWRDF---NGQGIDQIADVIQMLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN ++ ALPPCH +FQFYV N +LSC L QRS Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNRLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I + ++YEDF +Y H AI AK+SV Sbjct: 238 PKLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274 >gi|221110571|ref|XP_002155565.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 329 Score = 358 bits (919), Expect = 5e-97, Method: Composition-based stats. Identities = 136/283 (48%), Positives = 181/283 (63%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +I+ G + DRTG GT S FG QMRF+L + FPLLTTK+V WK VV ELLW Sbjct: 47 YQYLNLVKRIIETGYSKADRTGTGTLSIFGGQMRFNLRESFPLLTTKRVFWKGVVEELLW 106 Query: 62 FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------- 102 F+ G ++ + L + GV IW+ + G+LGPIYG QWR + Sbjct: 107 FISGSTDGNILAQKGVQIWNSNGTREFLDKCNLHHREVGDLGPIYGFQWRHFGAKYVDKH 166 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G IDQ++ I+ +++ +P RR I+SAWN I MALPPCH QFYV NG+LSC Sbjct: 167 ADYTGQGIDQLAQIIHTIKTNPDDRRMIMSAWNPVDIPLMALPPCHSFCQFYVANGELSC 226 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LGIPFNIASYSLLT ++A V + G+FIHTLGD H+YNNH Q+ Sbjct: 227 QMYQRSCDMGLGIPFNIASYSLLTYIIAHVCNLKPGDFIHTLGDAHVYNNHVSALKEQIG 286 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 RSPR P++ I + ++ F+ +DF L Y PH I ++V Sbjct: 287 RSPRPFPKLNIKRKVENIDDFKSDDFELIGYNPHQKIKMAMAV 329 >gi|9628075|ref|NP_042669.1| thymidylate synthase [Equid herpesvirus 2] gi|6686067|sp|Q89940|TYSY_EHV2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|695245|gb|AAC13860.1| thymidylate synthase [Equid herpesvirus 2] Length = 289 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 140/283 (49%), Positives = 184/283 (65%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL+ +R ++ G R DRTGVGT S FG Q ++ L FPLLTTK+V W+ V+ ELLW Sbjct: 7 HQYLNTVREILANGVRRGDRTGVGTLSVFGDQAKYSLRGQFPLLTTKRVFWRGVLEELLW 66 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG ++ + L GV IWD +D G+LGP+YG QWR + Sbjct: 67 FIRGSTDSNELSARGVKIWDANGSRDFLARAGLGHREPGDLGPVYGFQWRHFGAAYVDSK 126 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ ++ +P SRR +++AWN A + MALPPCH L QFYV G+LSC Sbjct: 127 TDYRGQGVDQLRDLIGEIKRNPESRRLVLTAWNPADLPAMALPPCHLLCQFYVAGGELSC 186 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFNIASYSLLT M+A + G + G+FIH LGD H+Y NH E LQL+ Sbjct: 187 QLYQRSGDMGLGVPFNIASYSLLTYMVAHLTGLEPGDFIHVLGDAHVYLNHVEPLKLQLT 246 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 RSPR P++ I + D+ FR EDF L Y PHAAI +++V Sbjct: 247 RSPRPFPRLRILRRVEDIDDFRAEDFALEGYHPHAAIPMEMAV 289 >gi|326572961|gb|EGE22940.1| thymidylate synthase [Moraxella catarrhalis CO72] Length = 280 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 152/280 (54%), Positives = 194/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ + Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFDFGFDDIQIADYQAHPAIKAPVAV 280 >gi|189236060|ref|XP_970584.2| PREDICTED: similar to bifunctional dihydrofolate reductase-thymidylate synthase [Tribolium castaneum] Length = 303 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 135/284 (47%), Positives = 178/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL ++ +I G + DRTGVGT S FG QMR+ L FPLLTTK+V W+ VV ELL Sbjct: 20 YQYLSHIKLIIDKGVKKSDRTGVGTFSIFGAQMRYSLRDNVFPLLTTKRVFWRGVVEELL 79 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +N + L V IWD + ++G+LGP+YG QWR + Sbjct: 80 WFIKGSTNANELKEKNVHIWDANSTREFLDSVGLNEREEGDLGPVYGFQWRHFGAEYKGM 139 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY IDQ++ +++++R P RR I+ AWN I +MALPPCHCL QF+V NG+LS Sbjct: 140 HWDYANQGIDQLAHVIETIRNKPNDRRIIMCAWNPVDIPEMALPPCHCLVQFFVANGELS 199 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E QL Sbjct: 200 CLLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHVYLNHVEPLQEQL 259 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + I + + F ++DF L YEPH + ++V Sbjct: 260 KRTPRPFPTLKIKRQVSSIEDFVFDDFELSGYEPHPKLSMPMAV 303 >gi|17137556|ref|NP_477367.1| Ts [Drosophila melanogaster] gi|13959716|sp|O76511|TYSY_DROME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|7295876|gb|AAF51176.1| Ts [Drosophila melanogaster] gi|19528437|gb|AAL90333.1| RE18955p [Drosophila melanogaster] gi|220948118|gb|ACL86602.1| CG3181-PA [synthetic construct] gi|220957368|gb|ACL91227.1| Ts-PA [synthetic construct] Length = 321 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 142/286 (49%), Positives = 183/286 (63%), Gaps = 23/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MH YLDLLRH+I G R DRT VGT S FG QMRFD+ FPLLTTK+V +++V ELL Sbjct: 37 MH-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+ G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 96 WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158 DY G IDQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QFYV G+ Sbjct: 156 DDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGE 215 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P++II + D+ FR+EDF + Y PH I ++V Sbjct: 276 QLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321 >gi|281350922|gb|EFB26506.1| hypothetical protein PANDA_011650 [Ailuropoda melanoleuca] Length = 276 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 128/276 (46%), Positives = 171/276 (61%), Gaps = 20/276 (7%) Query: 9 RHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN 68 H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF++G +N Sbjct: 1 EHILRCGVRKDDRTGTGTLSVFGLQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTN 60 Query: 69 VSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------DYDGNV 108 L GV IWD +D G+LGP+YG QWR + DY G Sbjct: 61 AKELSSKGVKIWDANGSRDFLDSLGFCSREEGDLGPVYGFQWRHFGAEYKDMDSDYSGQG 120 Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 IDQ+ ++ +++ +P RR I+ WN + MALPPCH L QFYV NG+LSCQLYQRSG Sbjct: 121 IDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSG 180 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R PR P Sbjct: 181 DMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKMQLQREPRPFP 240 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ I + + F+ EDF + Y PH I +++V Sbjct: 241 KLKILRKVETIDDFKAEDFQIEGYCPHPTIKMEMAV 276 >gi|160872451|ref|ZP_02062583.1| thymidylate synthase [Rickettsiella grylli] gi|159121250|gb|EDP46588.1| thymidylate synthase [Rickettsiella grylli] Length = 264 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 191/264 (72%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLD L H++K G + DRTG GT STFGYQMRFDL++GFPLLTTKK+H KSV+HELL Sbjct: 1 MRVYLDFLHHILKKGQPKIDRTGTGTLSTFGYQMRFDLNRGFPLLTTKKIHLKSVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+ YL+ H VSIWDEWAD G LGPIYG QWRSWP + IDQ+S+++Q + Sbjct: 61 WFLRGDTNIHYLNAHQVSIWDEWADSKGNLGPIYGKQWRSWPTTNDQSIDQLSTLIQQIN 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWNV + KMALPPCH LFQFYV N +LSCQLYQRS D FLG+PFNIAS Sbjct: 121 VNPDSRRLIVSAWNVGELKKMALPPCHLLFQFYVANDQLSCQLYQRSADAFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT M+A + GEFI T GD H+Y NH EQ QL+R P PQ+ I L Sbjct: 181 YALLTQMIAQQCHLKVGEFIWTGGDCHIYCNHLEQVHCQLARQPYLAPQLKILRKPKTLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + Y+DF + Y H AI A V+V Sbjct: 241 DYVYDDFLVTDYHYHPAIKAPVAV 264 >gi|313835878|gb|EFS73592.1| thymidylate synthase [Propionibacterium acnes HL037PA2] gi|314927122|gb|EFS90953.1| thymidylate synthase [Propionibacterium acnes HL044PA1] gi|314970765|gb|EFT14863.1| thymidylate synthase [Propionibacterium acnes HL037PA3] gi|328906030|gb|EGG25805.1| thymidylate synthase [Propionibacterium sp. P08] Length = 270 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 160/270 (59%), Positives = 201/270 (74%), Gaps = 6/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL+ ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLQRILDEGVRREDRTGTGTLSVFGHQMIFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+ V +LH + + IWDEWAD++G+LGPIYG QWRSWPD DG IDQI+ +++ +R Sbjct: 61 WFLRGDTTVGWLHDNAIHIWDEWADENGDLGPIYGRQWRSWPDGDGGTIDQIAKVIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA +D+MALPPCH LFQFYV LSCQLYQRSGD FLG+ Sbjct: 121 TNPWSRRHIVSAWNVAEVDEMALPPCHTLFQFYVTPDDRGEPTWLSCQLYQRSGDTFLGV 180 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD HLY NH +QA QL R PR LP + +NP Sbjct: 181 PFNIASYALLTYLVASVTGLKPLRFVHTLGDAHLYLNHLDQAHEQLKREPRHLPTLTVNP 240 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 241 NVRDIDGFELSDLTLTGYDPYPALPAPIAV 270 >gi|302759210|ref|XP_002963028.1| hypothetical protein SELMODRAFT_404548 [Selaginella moellendorffii] gi|300169889|gb|EFJ36491.1| hypothetical protein SELMODRAFT_404548 [Selaginella moellendorffii] Length = 502 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 126/282 (44%), Positives = 173/282 (61%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L++ +I+ G+ R DRTG GT S FG QMRF+L FPLLTTK+V W+ VV ELLW Sbjct: 220 YQYLNLIKDIIETGNTRSDRTGTGTISKFGCQMRFNLRNSFPLLTTKRVFWRGVVEELLW 279 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G +N L G+ IW ++ +LGP+YG QWR + Sbjct: 280 FISGSTNAKVLEDKGIHIWKGNGSREYLDSIGLSEREENDLGPVYGFQWRHFGARYSTMH 339 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ P RR ++S+WN A + +MALPPCH QFYV NG+LSC Sbjct: 340 DDYTGQGVDQLAEVIDKIKNKPDDRRIVLSSWNPADLKQMALPPCHMFAQFYVSNGELSC 399 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT M+A V G+F+H LGD H+Y NH + QL Sbjct: 400 QMYQRSCDMGLGVPFNIASYALLTCMIAHVCDLAPGDFVHVLGDAHVYTNHVDPLKEQLE 459 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P+ P + I + D+ SF +DF L YE H I K++ Sbjct: 460 NVPKPFPILKIATSNKDIDSFTAKDFQLVDYESHQRIAMKMA 501 >gi|227875722|ref|ZP_03993850.1| thymidylate synthase [Mobiluncus mulieris ATCC 35243] gi|269976729|ref|ZP_06183705.1| thymidylate synthase [Mobiluncus mulieris 28-1] gi|307700267|ref|ZP_07637307.1| thymidylate synthase [Mobiluncus mulieris FB024-16] gi|227843664|gb|EEJ53845.1| thymidylate synthase [Mobiluncus mulieris ATCC 35243] gi|269935094|gb|EEZ91652.1| thymidylate synthase [Mobiluncus mulieris 28-1] gi|307614478|gb|EFN93707.1| thymidylate synthase [Mobiluncus mulieris FB024-16] Length = 266 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 135/263 (51%), Positives = 184/263 (69%), Gaps = 2/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DLLR +++ G + DRTG GTRS F Q+R+DLS+GFP +TTK ++W VV ELLW Sbjct: 6 HQYEDLLREILREGVPKDDRTGTGTRSLFARQLRYDLSQGFPAITTKSLYWHGVVGELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G++N ++L + + IWDEWAD DG LGP+YG QWR+WP G +DQI+ ++++L+ Sbjct: 66 FLQGNTNATWLQENNIHIWDEWADTDGNLGPVYGHQWRAWPTEAG-TVDQIAGLIETLKT 124 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV+ + +MAL PCH FQ +V G+LS Q+YQRS D+FLG+PFNIASY Sbjct: 125 DPSSRRMVVSAWNVSDLPRMALAPCHMFFQCWVGAGRLSLQIYQRSCDMFLGVPFNIASY 184 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA G + GE + T GD H+YNNH Q QLSR P P +I++ + Sbjct: 185 ALLTHMLAQQSGLEVGELVWTGGDCHIYNNHVNQVQEQLSRDPYPFPTLILD-QAQSIDD 243 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + ++ L +Y+ H I A V+V Sbjct: 244 YTFDMIRLENYQHHPRISAPVAV 266 >gi|167627658|ref|YP_001678158.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189036935|sp|B0TYI1|TYSY_FRAP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|167597659|gb|ABZ87657.1| Thymidylate synthase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 274 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 145/277 (52%), Positives = 188/277 (67%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ G+ + DRTG GT S FGYQMRFDL +GFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLKYIKDNGTKKGDRTGTGTTSIFGYQMRFDLQQGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +NV YL+ + V IW+EWA ++GELGPIYG QWR + +G IDQI+ +++ L+ Sbjct: 61 WFLSGSTNVKYLNDNKVRIWNEWATEEGELGPIYGKQWRDF---NGEGIDQIAEVIEMLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN ++ ALPPCH +FQFY+ + KLSC L QRS Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVAKGNSALPPCHAMFQFYIADNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GEFI + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMIAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF ++Y+ H AI AK+SV Sbjct: 238 PTLKILRKPSSIFDYKYEDFEFQNYKHHPAIKAKISV 274 >gi|77163769|ref|YP_342294.1| thymidylate synthase [Nitrosococcus oceani ATCC 19707] gi|254436106|ref|ZP_05049613.1| thymidylate synthase [Nitrosococcus oceani AFC27] gi|123595153|sp|Q3JEI2|TYSY_NITOC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|76882083|gb|ABA56764.1| thymidylate synthase [Nitrosococcus oceani ATCC 19707] gi|207089217|gb|EDZ66489.1| thymidylate synthase [Nitrosococcus oceani AFC27] Length = 264 Score = 357 bits (917), Expect = 7e-97, Method: Composition-based stats. Identities = 152/264 (57%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L++ ++ G +R DRTG GT S FG+QMRFDL +GFPL+TTKK+H +++ ELL Sbjct: 1 MKPYLELIQKILDTGVERDDRTGTGTWSIFGHQMRFDLRQGFPLITTKKLHIRAIFIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP DG +DQ++ + +R Sbjct: 61 WFLRGETNVKYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGGYLDQMAKTLTQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P+SRRH+V A+N A +D+MALPPCH LFQFYV G+LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NHPHSRRHVVVAYNPACVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT ++A GEF+ T GDVHLY NH E A LQL+R P +LP + I L Sbjct: 181 YALLTHLIAQQCDLDVGEFVWTGGDVHLYRNHLEPARLQLTREPLSLPHLRIKRRPPSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++Y+D + Y+ + AI A +SV Sbjct: 241 EYQYDDLEIVDYQSYPAIKAAISV 264 >gi|1706522|sp|P51820|DRTS_SOYBN RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|999190|gb|AAB34317.1| dihydrofolate reductase-thymidylate synthase [Glycine max] gi|1096144|prf||2111237A dihydrofolate reductase-thymidylate synthase Length = 530 Score = 357 bits (917), Expect = 7e-97, Method: Composition-based stats. Identities = 133/281 (47%), Positives = 170/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L++ +I G+ + DRTG GT S FG QMRF+L FPLLTTKKV W+ VV ELLWF+ Sbjct: 250 YLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVEELLWFI 309 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW--------PD 103 G +N L G+ IWD A ++G+LGP+YG QWR + D Sbjct: 310 SGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFGARYTDMHHD 369 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + MALPPCH QFYV +G+LSCQ+ Sbjct: 370 YSGQGFDQLLDVINKIKRNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVAHGELSCQM 429 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LGIPFNIASY+LLT M+A V G+FIH +GD H+Y NH QL Sbjct: 430 YQRSADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPLQEQLHNQ 489 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP D+ SF DF L Y+PH I K+SV Sbjct: 490 PKPFPTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLSV 530 >gi|297744418|emb|CBI37680.3| unnamed protein product [Vitis vinifera] Length = 608 Score = 357 bits (917), Expect = 8e-97, Method: Composition-based stats. Identities = 133/281 (47%), Positives = 170/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +I G R DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 328 YLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFI 387 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103 G +N L G+ IWD A +D G+LGPIYG QWR + D Sbjct: 388 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHAD 447 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV +G+LSCQ+ Sbjct: 448 YTGQGFDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQM 507 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT M+A V G+FIH +GD H+Y H QL + Sbjct: 508 YQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKL 567 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP ++ SF DF L Y+PH I K++V Sbjct: 568 PKPFPILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 608 >gi|195470923|ref|XP_002087756.1| GE14974 [Drosophila yakuba] gi|194173857|gb|EDW87468.1| GE14974 [Drosophila yakuba] Length = 321 Score = 357 bits (917), Expect = 8e-97, Method: Composition-based stats. Identities = 138/284 (48%), Positives = 182/284 (64%), Gaps = 22/284 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLLR +I G R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V ELLWF Sbjct: 38 QYLDLLRQIIANGEQRMDRTQVGTLSLFGSQMRFDMRQSFPLLTTKRVFFRAVAEELLWF 97 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 + G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 98 VAGKTDAKLLQAKNVHIWDGNSTREFLDKLGFTERAVGDLGPVYGFQWRHFGAEYATCDD 157 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKLS 160 DY G IDQ+ ++ +++ +P RR I+SAWN I KMALPPCHCL QFYV G+LS Sbjct: 158 DYSGKGIDQLRQVIDTIKNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGELS 217 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E QL Sbjct: 218 CQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQL 277 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++II + D+ FR+EDF + Y P+ I ++V Sbjct: 278 QRTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPYPKIKMDMAV 321 >gi|21672690|ref|NP_660757.1| thymidylate synthase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091456|sp|Q8K9C3|TYSY_BUCAP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|21623330|gb|AAM67968.1| thymidylate synthase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 264 Score = 357 bits (917), Expect = 8e-97, Method: Composition-based stats. Identities = 151/264 (57%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ +IK G+ ++DRTG GT S FG+ M+FDL KGFPL+TTKK H S++HELL Sbjct: 1 MKQYLDLIKKIIKNGNSKKDRTGTGTLSIFGHHMKFDLKKGFPLITTKKCHIPSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG++N+ YL+ + +SIWD WADK G+LGPIYG QWRSW +G IDQI ++++ ++ Sbjct: 61 WFLRGETNIKYLNENKISIWDNWADKFGDLGPIYGKQWRSWDTSNGKKIDQIKNVLKQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR +VS+WNV IDKM+L PCH LFQFYV KLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 EDPDSRRILVSSWNVGEIDKMSLAPCHILFQFYVLKKKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y++L M+A Q GEF+ T GDVHLY NH E A Q+ R P+ LP++II L Sbjct: 181 YAILIHMIAQQCNLQVGEFLWTGGDVHLYKNHVELAKKQILRIPKKLPELIILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y+P++ I K+SV Sbjct: 241 QYSFEDFKIVGYKPYSLIKGKISV 264 >gi|89256104|ref|YP_513466.1| thymidylate synthase [Francisella tularensis subsp. holarctica LVS] gi|115314578|ref|YP_763301.1| thymidylate synthase [Francisella tularensis subsp. holarctica OSU18] gi|156502122|ref|YP_001428187.1| thymidylate synthase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010790|ref|ZP_02275721.1| thymidylate synthase [Francisella tularensis subsp. holarctica FSC200] gi|254367429|ref|ZP_04983455.1| thymidylate synthase [Francisella tularensis subsp. holarctica 257] gi|290954512|ref|ZP_06559133.1| thymidylate synthase [Francisella tularensis subsp. holarctica URFT1] gi|295312028|ref|ZP_06802843.1| thymidylate synthase [Francisella tularensis subsp. holarctica URFT1] gi|122325397|sp|Q0BMM0|TYSY_FRATO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123401607|sp|Q2A486|TYSY_FRATH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231700|sp|A7NB78|TYSY_FRATF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|89143935|emb|CAJ79154.1| thymidylate synthase [Francisella tularensis subsp. holarctica LVS] gi|115129477|gb|ABI82664.1| thymidylate synthase [Francisella tularensis subsp. holarctica OSU18] gi|134253245|gb|EBA52339.1| thymidylate synthase [Francisella tularensis subsp. holarctica 257] gi|156252725|gb|ABU61231.1| thymidylate synthase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 274 Score = 357 bits (917), Expect = 8e-97, Method: Composition-based stats. Identities = 148/277 (53%), Positives = 184/277 (66%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+ L+++ + G + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H SVVHELL Sbjct: 1 MREYLNFLKYIKENGVLKNDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G +N+ YL+ + V IW+EWA DGELGPIYG QWR + +G IDQI+ ++Q L+ Sbjct: 61 WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWRDF---NGQGIDQIADVIQMLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +V AWN ++ ALPPCH +FQFYV N KLSC L QRS Sbjct: 118 TNPNSRRILVLAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIASYSLLT M+A GE I + GD H+YNNH EQ + QLSR P L Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGELIWSGGDCHIYNNHIEQVNEQLSREPLAL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + ++YEDF +Y H AI AK+SV Sbjct: 238 PTLKILRKSNSIFDYKYEDFEFENYNHHPAIKAKISV 274 >gi|3342458|gb|AAC27622.1| thymidylate synthase [Drosophila melanogaster] Length = 321 Score = 357 bits (917), Expect = 8e-97, Method: Composition-based stats. Identities = 141/286 (49%), Positives = 183/286 (63%), Gaps = 23/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MH YLDLLRH+I G R DRT VGT S FG QMRFD+ FPLLTTK+V +++V ELL Sbjct: 37 MH-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+ G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 96 WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158 DY G IDQ+ ++ ++R +P RR I+SAWN + KMALPPCHCL QFYV G+ Sbjct: 156 DDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDMPKMALPPCHCLAQFYVSEKRGE 215 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P++II + D+ FR+EDF + Y PH I ++V Sbjct: 276 QLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321 >gi|289193|gb|AAA32788.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] Length = 519 Score = 357 bits (917), Expect = 8e-97, Method: Composition-based stats. Identities = 129/281 (45%), Positives = 169/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 239 YLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 298 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G +N L G+ IWD A ++G+LGP+YG QWR + D Sbjct: 299 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 358 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV G+LSCQ+ Sbjct: 359 YTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 418 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT MLA V G+FIH LGD H+Y H QL Sbjct: 419 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYKTHVRPLQEQLLNP 478 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP + SF DF L Y+PH I K++V Sbjct: 479 PKPFPVLKINPEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 519 >gi|288941276|ref|YP_003443516.1| thymidylate synthase [Allochromatium vinosum DSM 180] gi|288896648|gb|ADC62484.1| thymidylate synthase [Allochromatium vinosum DSM 180] Length = 279 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 153/279 (54%), Positives = 194/279 (69%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR V+ G D+ DRTGVGTR+ FG Q+RFDL+ GFPLLTTK+VH+KSVV ELL Sbjct: 1 MQVYLDLLRDVVANGQDQADRTGVGTRAVFGRQVRFDLAAGFPLLTTKRVHFKSVVGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL G ++ +L HG+ IWDEWA + LGPIYG QWR+WP DG IDQ++ +V ++R Sbjct: 61 WFLSGSTDNGWLRAHGIRIWDEWATEHDALGPIYGAQWRAWPAPDGRAIDQLAELVATIR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P+SRR +VSAWN A + MAL PCHCLFQF+V NG+LSCQLYQRS Sbjct: 121 TRPHSRRLVVSAWNPADLPDETLSPQDNVRAGRMALAPCHCLFQFHVANGRLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF--EQADLQLSRSPR 225 D+FLG+PFNIASY+LLT ++A + GEFIHT GD+HLY NH E QL R+PR Sbjct: 181 ADLFLGVPFNIASYALLTHLIAQQCDLEPGEFIHTFGDLHLYRNHLTSEIVHAQLGRAPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP++++ L + +ED L+ Y+PH AI A ++V Sbjct: 241 PLPRLVLKRRPETLFDYGFEDIELQGYDPHPAIRAPIAV 279 >gi|15227185|ref|NP_179230.1| THY-1 (THYMIDYLATE SYNTHASE 1); dihydrofolate reductase/ thymidylate synthase [Arabidopsis thaliana] gi|21264432|sp|Q05762|DRTS1_ARATH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase 1; Short=DHFR-TS 1; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|4544392|gb|AAD22302.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|17381024|gb|AAL36324.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|21281275|gb|AAM45080.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|330251395|gb|AEC06489.1| thymidylate synthase [Arabidopsis thaliana] Length = 519 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 130/281 (46%), Positives = 169/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+++ +I G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+ Sbjct: 239 YLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 298 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G +N L G+ IWD A ++G+LGP+YG QWR + D Sbjct: 299 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 358 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV G+LSCQ+ Sbjct: 359 YTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 418 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASYSLLT MLA V G+FIH LGD H+Y H QL Sbjct: 419 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYKTHVRPLQEQLLNL 478 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P M INP + SF DF L Y+PH I K++V Sbjct: 479 PKPFPVMKINPEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 519 >gi|294781666|ref|ZP_06747001.1| thymidylate synthase [Enterococcus faecalis PC1.1] gi|294451218|gb|EFG19685.1| thymidylate synthase [Enterococcus faecalis PC1.1] gi|315033984|gb|EFT45916.1| thymidylate synthase [Enterococcus faecalis TX0017] gi|329571685|gb|EGG53366.1| thymidylate synthase [Enterococcus faecalis TX1467] Length = 317 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 147/313 (46%), Positives = 187/313 (59%), Gaps = 52/313 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L + +++ G + DRTG GT S FGYQMRFDL+KGFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL IWDEWA Sbjct: 65 KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNV--IDQISSIVQSLRADPYSRRHIVS 131 +K GELG IYG QWR W DGN IDQ++++++ ++ +P SRR IVS Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGNGSFIDQLANVIEMIKTNPDSRRLIVS 184 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 185 AWNPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHE 244 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G GEF+HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Sbjct: 245 TGLAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEG 304 Query: 252 YEPHAAILAKVSV 264 Y+PH I A ++V Sbjct: 305 YDPHPTIKAPIAV 317 >gi|228469308|ref|ZP_04054334.1| thymidylate synthase [Porphyromonas uenonis 60-3] gi|228309207|gb|EEK17809.1| thymidylate synthase [Porphyromonas uenonis 60-3] Length = 265 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 158/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G++R DRTG GT FG+QM FDL+ GFPLLTTKK+H +S++HELL Sbjct: 1 MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119 WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G IDQ+ + + Sbjct: 61 WFLKGDTNLQYLHDNKVSIWDEWADEAGDLGPIYGAQWRHWFDPHTGQTIDQMQQALDLI 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWNVA + M L PCHCL Q+YV KL QLYQRS D+FLG+PFNIA Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGDKLDLQLYQRSADIFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M + L Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F Y+DFTL Y P+ I A VSV Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSV 265 >gi|326571344|gb|EGE21361.1| thymidylate synthase [Moraxella catarrhalis BC8] Length = 280 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 152/280 (54%), Positives = 194/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ + Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPSSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFDFGFDDIQIADYQAHPAIKAPVAV 280 >gi|301774490|ref|XP_002922670.1| PREDICTED: thymidylate synthase-like [Ailuropoda melanoleuca] Length = 324 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 128/275 (46%), Positives = 171/275 (62%), Gaps = 20/275 (7%) Query: 10 HVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNV 69 H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF++G +N Sbjct: 50 HILRCGVRKDDRTGTGTLSVFGLQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNA 109 Query: 70 SYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------DYDGNVI 109 L GV IWD +D G+LGP+YG QWR + DY G I Sbjct: 110 KELSSKGVKIWDANGSRDFLDSLGFCSREEGDLGPVYGFQWRHFGAEYKDMDSDYSGQGI 169 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ +++ +P RR I+ WN + MALPPCH L QFYV NG+LSCQLYQRSGD Sbjct: 170 DQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSGD 229 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R PR P+ Sbjct: 230 MGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKMQLQREPRPFPK 289 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + I + + F+ EDF + Y PH I +++V Sbjct: 290 LKILRKVETIDDFKAEDFQIEGYCPHPTIKMEMAV 324 >gi|194758475|ref|XP_001961487.1| GF14907 [Drosophila ananassae] gi|190615184|gb|EDV30708.1| GF14907 [Drosophila ananassae] Length = 340 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 136/285 (47%), Positives = 180/285 (63%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+LLR +I G R DRT VGT S FG QMRF L FPLLTTK+V +++V ELLW Sbjct: 56 KQYLNLLRSIINTGERRMDRTEVGTLSIFGSQMRFSLRGCFPLLTTKRVFFRAVAEELLW 115 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 116 FVAGKTDAKLLQAKNVHIWDGNSTREFLDKLGHTDRAVGDLGPVYGFQWRHFGAEYTTCD 175 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGKL 159 DY G IDQ+ ++ +++ +P RR I+SAWN I KMALPPCHCL QFYV + G+L Sbjct: 176 DDYRGKGIDQLKHVIDTIKKNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQERGEL 235 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E Q Sbjct: 236 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLQEQ 295 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R PR P+++I + D+ FRYEDF + Y P+ I +++ Sbjct: 296 LEREPRPFPKLVIKRQVQDIEDFRYEDFEIVDYNPYPKIKMDMAI 340 >gi|326563467|gb|EGE13730.1| thymidylate synthase [Moraxella catarrhalis 103P14B1] gi|326573777|gb|EGE23734.1| thymidylate synthase [Moraxella catarrhalis 101P30B1] Length = 280 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 152/280 (54%), Positives = 194/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ + Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQITDYQAHPAIKAPVAV 280 >gi|223646840|gb|ACN10178.1| Thymidylate synthase [Salmo salar] gi|223672701|gb|ACN12532.1| Thymidylate synthase [Salmo salar] Length = 333 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 123/281 (43%), Positives = 173/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+ ++++ G + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 53 YLNQCEYILQHGHRKGDRTGTGVISVFGSQTRYSLRDQFPLLTTKRVFWKGILEELLWFI 112 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 +G +N L GV IWD ++G+LGP+YG QWR + D Sbjct: 113 KGSTNAKELTEKGVRIWDANGSRQFLDKMGFTDREEGDLGPVYGFQWRHYGAEYSDMHKD 172 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ +++ +P RR I+ AWN + M LPPCH L QFYV +G+LSCQL Sbjct: 173 YTGQGVDQLQKVIDTIKTNPEDRRIIMCAWNPKDLPHMVLPPCHALCQFYVIDGELSCQL 232 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y+NH E +QL R Sbjct: 233 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYSNHIEPLKVQLQRE 292 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ + + + FR EDF + Y PH I +++V Sbjct: 293 IRPFPKLKLLRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 333 >gi|270005647|gb|EFA02095.1| hypothetical protein TcasGA2_TC007732 [Tribolium castaneum] Length = 330 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 135/284 (47%), Positives = 178/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL ++ +I G + DRTGVGT S FG QMR+ L FPLLTTK+V W+ VV ELL Sbjct: 47 YQYLSHIKLIIDKGVKKSDRTGVGTFSIFGAQMRYSLRDNVFPLLTTKRVFWRGVVEELL 106 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +N + L V IWD + ++G+LGP+YG QWR + Sbjct: 107 WFIKGSTNANELKEKNVHIWDANSTREFLDSVGLNEREEGDLGPVYGFQWRHFGAEYKGM 166 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY IDQ++ +++++R P RR I+ AWN I +MALPPCHCL QF+V NG+LS Sbjct: 167 HWDYANQGIDQLAHVIETIRNKPNDRRIIMCAWNPVDIPEMALPPCHCLVQFFVANGELS 226 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E QL Sbjct: 227 CLLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHVYLNHVEPLQEQL 286 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + I + + F ++DF L YEPH + ++V Sbjct: 287 KRTPRPFPTLKIKRQVSSIEDFVFDDFELSGYEPHPKLSMPMAV 330 >gi|251796664|ref|YP_003011395.1| thymidylate synthase [Paenibacillus sp. JDR-2] gi|247544290|gb|ACT01309.1| thymidylate synthase [Paenibacillus sp. JDR-2] Length = 320 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 156/312 (50%), Positives = 193/312 (61%), Gaps = 50/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL LLRHV++ G + DRTG GT STFGYQMRFDL+KGFP+LTTK+V +K +V ELLWF Sbjct: 9 EYLQLLRHVLENGVKKEDRTGTGTISTFGYQMRFDLAKGFPILTTKRVPFKLIVSELLWF 68 Query: 63 LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84 ++GDSN+ YL +H IWDEWA Sbjct: 69 IKGDSNIRYLLKHKNHIWDEWAFKRWVESTDYNGPDMTNFGLRSQTDEAFNVVYQEQMDK 128 Query: 85 ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 +K G+LG +YG QWR W G IDQ+ I+ +++ +P SRR IVSA Sbjct: 129 FTNLVLTDDAFAEKYGDLGNVYGKQWREWRTTQGETIDQLKGIIDTIKKNPDSRRLIVSA 188 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH +FQFYV NGKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A Sbjct: 189 WNPEDVPSMALPPCHTMFQFYVINGKLSCQLYQRSGDIFLGIPFNIASYALLTHLIAQEC 248 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G GEFIHTLGD H+Y NH EQ D+QL R R LP + INP++ + ED L +Y Sbjct: 249 GLGVGEFIHTLGDAHIYLNHLEQIDIQLQRDMRELPVLAINPDVSSIFDAEVEDIKLENY 308 Query: 253 EPHAAILAKVSV 264 +PH I A V+V Sbjct: 309 QPHPTIKAPVAV 320 >gi|257869664|ref|ZP_05649317.1| thymidylate synthase [Enterococcus gallinarum EG2] gi|257803828|gb|EEV32650.1| thymidylate synthase [Enterococcus gallinarum EG2] Length = 315 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 147/315 (46%), Positives = 189/315 (60%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL + +++ G+ + DRTG GT+S FG+QMRFDLS+GFPLLTTK+V + + EL Sbjct: 1 MEQAYLDLGKKILETGNVKGDRTGTGTKSIFGHQMRFDLSQGFPLLTTKRVPFGLIKSEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84 LWFL+GD+N+ +L +H IWDEWA Sbjct: 61 LWFLKGDTNIRFLLQHKNHIWDEWAFERYIKSEDYTGPDMTDFGRRSLIDEEFNASYQEE 120 Query: 85 ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 +K G+LG +YG QWR W G IDQI +++ ++ P SRR I Sbjct: 121 LQKFCERILNDEAFAEKFGDLGHVYGYQWRHWETTKGEFIDQIKEVIEMIKTTPDSRRLI 180 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 181 VSAWNPEDVPTMALPPCHTMFQFYVHEGRLSCQLYQRSADVFLGVPFNIASYALLTHLIA 240 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G Q GEFIHTLGD HLY+NH EQ QLSR+ R+ P + +NP + F D T+ Sbjct: 241 HETGLQVGEFIHTLGDAHLYSNHMEQMKEQLSRTIRSAPTLHLNPEKQSIFDFEMGDITI 300 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I A ++V Sbjct: 301 EGYDPHPTIKAPIAV 315 >gi|225428412|ref|XP_002280254.1| PREDICTED: similar to Bifunctional dihydrofolate reductase-thymidylate synthase [Vitis vinifera] Length = 524 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 133/281 (47%), Positives = 170/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +I G R DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 244 YLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFI 303 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103 G +N L G+ IWD A +D G+LGPIYG QWR + D Sbjct: 304 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHAD 363 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV +G+LSCQ+ Sbjct: 364 YTGQGFDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQM 423 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT M+A V G+FIH +GD H+Y H QL + Sbjct: 424 YQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKL 483 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP ++ SF DF L Y+PH I K++V Sbjct: 484 PKPFPILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 524 >gi|296113703|ref|YP_003627641.1| thymidylate synthase [Moraxella catarrhalis RH4] gi|295921397|gb|ADG61748.1| thymidylate synthase [Moraxella catarrhalis RH4] gi|326562443|gb|EGE12762.1| thymidylate synthase [Moraxella catarrhalis 7169] gi|326562812|gb|EGE13107.1| thymidylate synthase [Moraxella catarrhalis 46P47B1] gi|326570637|gb|EGE20673.1| thymidylate synthase [Moraxella catarrhalis BC7] gi|326574801|gb|EGE24735.1| thymidylate synthase [Moraxella catarrhalis O35E] Length = 280 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 151/280 (53%), Positives = 194/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ + Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT ++A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHVVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQIADYQAHPAIKAPVAV 280 >gi|325068281|ref|ZP_08126954.1| thymidylate synthase [Actinomyces oris K20] Length = 299 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 139/264 (52%), Positives = 178/264 (67%), Gaps = 4/264 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL V+ G+ + DRTG GTRS F Q+R+DL +GFP +TTK V K+V ELLWFL Sbjct: 37 YENLLAEVLTNGTAKSDRTGTGTRSLFARQLRYDLQRGFPRITTKFVAMKAVKGELLWFL 96 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV +L G++IWDEWAD GELGP+YG QWRSWP DG IDQI+ ++ +LR DP Sbjct: 97 RGETNVRWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGAIDQIAGLIDTLRTDP 156 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + MAL PCH FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L Sbjct: 157 DSRRMLVSAWNVSELGSMALAPCHAFFQCYVADGRLSLQIYQRSADLFLGVPFNIASYAL 216 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDLLS 241 LT MLA + GE I T GD H+Y+NH EQ QLSR P P + + + + Sbjct: 217 LTHMLAQQTDLEPGELIWTGGDCHIYDNHIEQVRTQLSRVPSAHPFPTLRLERA-ESIDA 275 Query: 242 FRYEDFTL-RSYEPHAAILAKVSV 264 + +D + YE H I A V+V Sbjct: 276 YDMDDIDASQGYEHHPTIKAPVAV 299 >gi|313812335|gb|EFS50049.1| thymidylate synthase [Propionibacterium acnes HL025PA1] Length = 269 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 7/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD G IDQI+ +V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPD-GGGTIDQIAKVVEQIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV LSCQLYQRSGD FLG+ Sbjct: 120 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N+ D+ F D TL Y+P+ A+ A ++V Sbjct: 240 NVRDIDGFELSDITLTGYDPYPALPAPIAV 269 >gi|329895892|ref|ZP_08271220.1| Thymidylate synthase [gamma proteobacterium IMCC3088] gi|328922110|gb|EGG29469.1| Thymidylate synthase [gamma proteobacterium IMCC3088] Length = 277 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 145/277 (52%), Positives = 185/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G D+ DRTG GTRS F Q R DLS+GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKVYLDLLRDIMAHGVDKSDRTGTGTRSVFARQFRHDLSEGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N ++L +GVSIWDEWA ++G+LGPIYG QWRSWP DG I+QI ++ L+ Sbjct: 61 WFLRGDTNTAWLRENGVSIWDEWATEEGDLGPIYGAQWRSWPTADGGAINQIDYVIDCLK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR + WNV + KMALPPCH L+QFYV NG+LS QLY RS Sbjct: 121 HKPDSRRILFHGWNVEYLPDETLSPQENVRQGKMALPPCHLLYQFYVANGRLSAQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+P+N+AS +LLT ML + GE I + GD H+Y+NHFEQ + QL R PR L Sbjct: 181 SDSFLGLPYNLASLALLTHMLCQQCELEPGEVIISTGDSHIYSNHFEQVETQLEREPRAL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + + ++DF L YEPHA I V++ Sbjct: 241 PTLRIKRKPESIYDYCFDDFELVGYEPHAHIAGAVAI 277 >gi|118781473|ref|XP_311491.3| AGAP010457-PA [Anopheles gambiae str. PEST] gi|116129966|gb|EAA07160.3| AGAP010457-PA [Anopheles gambiae str. PEST] Length = 302 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 137/284 (48%), Positives = 182/284 (64%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 YL L+R +I GS R DRTGVGT S FG QMRF L G PLLTTKKV ++ V ELL Sbjct: 19 QAYLQLIRDIINKGSKRLDRTGVGTLSIFGAQMRFSLRDGIIPLLTTKKVFFRGVAEELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +NV L GV IWD + ++G+LGP+YG QWR + Sbjct: 79 WFIKGSTNVKDLQAKGVRIWDGNSTREYLDSCGFTDREEGDLGPVYGFQWRHFGATYKTC 138 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ++ ++ ++ +PY RR I+ AWN + I MALPPCHCL QF+V +G+LS Sbjct: 139 HDDYTGQGIDQLAEVIDKIKNNPYDRRIIMCAWNPSDIPNMALPPCHCLAQFFVSDGELS 198 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS DV LG+PFNIASYSLLT M+A V G + GEFIHT GD H+Y NH + Q+ Sbjct: 199 CQMYQRSADVGLGVPFNIASYSLLTHMIAHVTGLKAGEFIHTTGDTHIYLNHVDGLREQI 258 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+P+ P ++ + + +F Y+DF + +Y P +AI K++V Sbjct: 259 ERTPKKFPTLVFKRKVESIDNFTYDDFEILNYNPQSAIKMKMAV 302 >gi|284992331|ref|YP_003410885.1| thymidylate synthase [Geodermatophilus obscurus DSM 43160] gi|284065576|gb|ADB76514.1| thymidylate synthase [Geodermatophilus obscurus DSM 43160] Length = 272 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 149/262 (56%), Positives = 193/262 (73%), Gaps = 1/262 (0%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QY DLLR V++ G+ ++DRTG GT S FG ++R+DL++ FPL+TTK VH++S+ +ELLWF Sbjct: 12 QYEDLLRRVLEQGTPKQDRTGTGTVSLFGERLRYDLAERFPLITTKSVHFRSIAYELLWF 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 LRGDSNV +L + VSIWDEWA +GELGP+YGVQWRSWP G +DQI+ ++++LR D Sbjct: 72 LRGDSNVRWLQENRVSIWDEWASPEGELGPVYGVQWRSWPTPGGEHVDQIAGVLETLRTD 131 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR +VSAWNVA + MAL PCH LFQF+V +G+LSCQLYQRS D+FLG+PFNIASY+ Sbjct: 132 PDSRRMVVSAWNVAALPDMALAPCHALFQFHVADGRLSCQLYQRSADMFLGVPFNIASYA 191 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT M+A+ +G G+ I GD H+Y+NH +Q QLSR P + + P L + Sbjct: 192 LLTRMVAAQVGLAPGDCIWVGGDCHVYSNHVDQVREQLSREVLPFPTLDLAPAP-SLFDY 250 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 YE FTLR Y H AI A V+V Sbjct: 251 TYEHFTLRDYRHHPAIRAAVAV 272 >gi|326563217|gb|EGE13485.1| thymidylate synthase [Moraxella catarrhalis 12P80B1] Length = 280 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 152/280 (54%), Positives = 194/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ + Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQIADYQAHPAIKAPVAV 280 >gi|225010453|ref|ZP_03700924.1| Thymidylate synthase [Flavobacteria bacterium MS024-3C] gi|225005282|gb|EEG43233.1| Thymidylate synthase [Flavobacteria bacterium MS024-3C] Length = 274 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 164/277 (59%), Positives = 208/277 (75%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL HV+K G + DRTG GT S FGYQMRF+LSKGFP++TTKK+H KS+V+ELL Sbjct: 1 MKQYHDLLNHVLKNGVQKGDRTGTGTLSVFGYQMRFNLSKGFPMVTTKKLHLKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GV IW+EWAD +G+LGP+YG QWR+W +G IDQI ++QS++ Sbjct: 61 WFLKGDTNIGYLQENGVRIWNEWADSNGDLGPVYGKQWRNW---NGEEIDQIKEVIQSIK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR IVSAWN +++ K ALPPCH FQFYV GKLSCQLYQRS Sbjct: 118 ENPNSRRMIVSAWNPSVLPDPKTSFEENVAKGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+LLTMM+A V G + G+FIHT GD H+YNNH EQ +LQLSR+P+ L Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGLEAGDFIHTFGDAHIYNNHMEQIELQLSRTPKDL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M +NP I D+ F +EDFTL +Y+PH I V++ Sbjct: 238 PKMTLNPEIKDIFDFDFEDFTLENYDPHPHIKGAVAI 274 >gi|194855206|ref|XP_001968495.1| GG24473 [Drosophila erecta] gi|190660362|gb|EDV57554.1| GG24473 [Drosophila erecta] Length = 304 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL ++ G R DRT VGT S FG QMRF++ + FPLLTTK+V +++V ELLWF Sbjct: 22 QYLDLLSEILANGEQRMDRTEVGTLSMFGCQMRFNMRESFPLLTTKRVFFRAVAEELLWF 81 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 + G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 82 VAGKTDAKLLQAKNVHIWDGNSSREFLDSLGLTERSVGDLGPVYGFQWRHFGAEYATCDD 141 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGKLSC 161 DY G IDQ+ ++ +++ +P RR I+SAWN + KM LPPCHCL QF+V G+LSC Sbjct: 142 DYSGKGIDQLRRVIDTIKNNPSDRRIILSAWNPVDMPKMVLPPCHCLAQFFVSTRGELSC 201 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E QL Sbjct: 202 QLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLK 261 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++ I + D+ FR+EDF + Y P+ I ++V Sbjct: 262 RTPRPFPKLNIKRQVQDIDDFRFEDFEIVDYNPYPKIKMDMAV 304 >gi|326569151|gb|EGE19213.1| thymidylate synthase [Moraxella catarrhalis BC1] Length = 280 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 152/280 (54%), Positives = 194/280 (69%), Gaps = 16/280 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL+H++ G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL Sbjct: 1 MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107 WFL+G++N SYL + V+IW+EWA + GELGPIYG QWR++ + Sbjct: 61 WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120 Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 DQI+ ++ + +P SRR IVS WN ++ALPPCH LFQF+V GKLSCQLY Sbjct: 121 HDDGFDQIAWLINEINTNPSSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LLT M+A V GEFI T GD HLY NHFEQ LQLSR P Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +NP + + F ++D + Y+ H AI A V+V Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQITDYQAHPAIKAPVAV 280 >gi|227551179|ref|ZP_03981228.1| thymidylate synthase [Enterococcus faecium TX1330] gi|227179647|gb|EEI60619.1| thymidylate synthase [Enterococcus faecium TX1330] Length = 324 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 150/315 (47%), Positives = 184/315 (58%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + EL Sbjct: 10 MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84 LWFL+GD+N+ YL ++ IWDEWA Sbjct: 70 LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLTDPEFNEEYKKQ 129 Query: 85 ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 +K G LG IYG QWR W DG IDQI ++++++ P SRR I Sbjct: 130 SKLFCEKILTDDSFAEKYGNLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLI 189 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A Sbjct: 190 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 249 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G + GEF+HTLGD HLY NH EQ QLSR R P + +N + F ED L Sbjct: 250 HETGLEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQL 309 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I A ++V Sbjct: 310 EGYDPHPTIKAPIAV 324 >gi|332300790|ref|YP_004442711.1| Thymidylate synthase [Porphyromonas asaccharolytica DSM 20707] gi|332177853|gb|AEE13543.1| Thymidylate synthase [Porphyromonas asaccharolytica DSM 20707] Length = 265 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 157/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ V+ G++R DRTG GT FG+QM FDL+ GFPLLTTKK+H +S++HELL Sbjct: 1 MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119 WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G IDQ+ + + Sbjct: 61 WFLKGDTNLQYLHDNKVSIWDEWADETGDLGPIYGAQWRHWFDPHTGQTIDQMQQALDLI 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 R P SRR +VSAWNVA + M L PCHCL Q+YV KL QLYQRS D+FLG+PFNIA Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGNKLDLQLYQRSADIFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M + L Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F Y+DFTL Y P+ I A VS+ Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSI 265 >gi|302848723|ref|XP_002955893.1| hypothetical protein VOLCADRAFT_66296 [Volvox carteri f. nagariensis] gi|300258861|gb|EFJ43094.1| hypothetical protein VOLCADRAFT_66296 [Volvox carteri f. nagariensis] Length = 483 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+L+R +I G+ R DRTG GT S FG R++L FPLLT+K+V WK V ELLWF Sbjct: 202 QYLELVRELITSGTFRPDRTGTGTYSRFGRTARYNLRHTFPLLTSKRVFWKGVAEELLWF 261 Query: 63 LRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP-------- 102 +RG +N + L + IWD + G+LGP+YG QWR + Sbjct: 262 IRGSTNANLLRDKNIHIWDGNSTREYLDSRGLHHREVGDLGPVYGFQWRHFGAAYKDMHT 321 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ +I++ +R DP RR I+SAWN A +++MALPPCH QFYV +G+LSC Sbjct: 322 DYTGQGVDQLKAIIEQIRKDPNDRRMIMSAWNPAALNEMALPPCHMFCQFYVADGELSCL 381 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS DV LG+PFNIASY+LLT ++A V G + G+FIH +GD H+Y NH E QL Sbjct: 382 MYQRSCDVGLGVPFNIASYALLTRLVAQVTGLRAGDFIHVMGDTHVYANHVEPLKEQLKN 441 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P + INP D+ SF +EDF L Y+PH I K++V Sbjct: 442 TPRHFPILNINPAKTDIDSFVFEDFELVDYQPHQTIKMKMAV 483 >gi|159484697|ref|XP_001700389.1| predicted protein [Chlamydomonas reinhardtii] gi|158272276|gb|EDO98078.1| predicted protein [Chlamydomonas reinhardtii] Length = 478 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 176/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L+R +I G R DRTG GT S FG R++L FPLLT+K+V WK V ELLW Sbjct: 196 QQYLELVRELITSGVFRPDRTGTGTYSRFGRTSRYNLRHTFPLLTSKRVFWKGVAEELLW 255 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G +N + L + IWD + ++ G+LGP+YG QWR + Sbjct: 256 FISGATNANLLRDKNIHIWDGNSSREFLDGRGLGHREVGDLGPVYGFQWRHFGAEYKDMH 315 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ I+ +L+ DP RR ++SAWN A + +MALPPCH QFYV +G+LSC Sbjct: 316 TDYTGKGVDQLRYIIDTLKKDPNDRRMVMSAWNPAALAEMALPPCHMFCQFYVADGELSC 375 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS DV LG+PFNIASY+LLT ++A V G + GE +H +GD H+Y NH E QL Sbjct: 376 LMYQRSCDVGLGVPFNIASYALLTRLVAQVTGLRAGELVHVMGDTHVYANHVEPLREQLK 435 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P + INP+ D+ SF +EDF L Y PH I +++V Sbjct: 436 NTPRHFPTLRINPDKKDIDSFVFEDFELVDYNPHKTIKMQMAV 478 >gi|213511040|ref|NP_001134715.1| Thymidylate synthase [Salmo salar] gi|209735384|gb|ACI68561.1| Thymidylate synthase [Salmo salar] Length = 333 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 123/281 (43%), Positives = 172/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+ ++++ G + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 53 YLNQCEYILQHGHRKGDRTGTGVISVFGSQTRYSLRDQFPLLTTKRVFWKGILEELLWFI 112 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 +G +N L GV IWD ++G+LGP+YG QWR + D Sbjct: 113 KGSTNAKELTEKGVRIWDANGSRQFLDKMGFTDREEGDLGPVYGFQWRHYGAEYSDMRKD 172 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ ++ ++ +P RR I+ AWN + M LPPCH L QFYV +G+LSCQL Sbjct: 173 YTGQGVDQLQKVIDIIKTNPEDRRIIMCAWNPKDLPHMVLPPCHALCQFYVIDGELSCQL 232 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y+NH E +QL R Sbjct: 233 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYSNHIEPLKVQLQRE 292 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ + + + FR EDF + Y PH I +++V Sbjct: 293 IRPFPKLKLLRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 333 >gi|257898835|ref|ZP_05678488.1| thymidylate synthase [Enterococcus faecium Com15] gi|293570261|ref|ZP_06681330.1| thymidylate synthase [Enterococcus faecium E980] gi|257836747|gb|EEV61821.1| thymidylate synthase [Enterococcus faecium Com15] gi|291609668|gb|EFF38929.1| thymidylate synthase [Enterococcus faecium E980] Length = 315 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 150/315 (47%), Positives = 185/315 (58%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + EL Sbjct: 1 MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84 LWFL+GD+N+ YL ++ IWDEWA Sbjct: 61 LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLADPEFNEEYKKQ 120 Query: 85 ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 +K G+LG IYG QWR W DG IDQI ++++++ P SRR I Sbjct: 121 SKLFCEKILTDDSFAEKYGDLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLI 180 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A Sbjct: 181 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 240 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G + GEF+HTLGD HLY NH EQ QLSR R P + +N + F ED L Sbjct: 241 HETGLEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQL 300 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I A ++V Sbjct: 301 EGYDPHPTIKAPIAV 315 >gi|126665225|ref|ZP_01736208.1| Thymidylate synthase [Marinobacter sp. ELB17] gi|126630595|gb|EBA01210.1| Thymidylate synthase [Marinobacter sp. ELB17] Length = 279 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 146/279 (52%), Positives = 191/279 (68%), Gaps = 15/279 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL++ ++ GS+R DRTGVGTRS FG Q+RF+L +GFPL+TTKK+H +S++ ELL Sbjct: 1 MRAYLDLMQDIVDNGSNRGDRTGVGTRSVFGRQVRFNLQQGFPLVTTKKIHLRSIIQELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G ++ ++L V+IW+EWA +G+LGPIYG QWRSW DG VIDQIS ++ +R Sbjct: 61 WFLQGSTDNNWLTERKVNIWNEWALDNGDLGPIYGKQWRSWQCQDGRVIDQISDLIDQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR IVSAWN A + MAL PCHCLFQFYV++GKLSCQLYQRS Sbjct: 121 QKPNSRRLIVSAWNPAELPDESIGPQDNVRQGRMALAPCHCLFQFYVNDGKLSCQLYQRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLSRSPR 225 D+FLG+PFNIASY+LLT M+A GEF+HT GD HLY+NH QL R PR Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYSNHLTDDIVFEQLKREPR 240 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP+++I + + +DF + YEP+ I A +++ Sbjct: 241 ALPKLVIKRKPNSIFEYNLDDFAFKGYEPYPGIKAPIAI 279 >gi|314968970|gb|EFT13068.1| thymidylate synthase [Propionibacterium acnes HL037PA1] Length = 269 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 7/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG IDQI+++V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPD-DGGTIDQIANVVEQIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA I +MALPPCH LFQFYV LSCQLYQRSGD FLG+ Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I D+ F D TL Y+P+ A+ A ++V Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269 >gi|195997697|ref|XP_002108717.1| hypothetical protein TRIADDRAFT_18453 [Trichoplax adhaerens] gi|190589493|gb|EDV29515.1| hypothetical protein TRIADDRAFT_18453 [Trichoplax adhaerens] Length = 317 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 124/284 (43%), Positives = 177/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L++ ++ G+ + DRTG GT+S FG QMRF L PLLTTK+ W+ + ELL Sbjct: 34 YQYLRLIQRIMNEGNFKGDRTGTGTKSIFGAQMRFSLRDNQMPLLTTKRTFWRGIAEELL 93 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF++G +N + L+ G+ W+ ++ G+LGPIYG QWR + Sbjct: 94 WFVKGSTNANQLNEKGIKFWNANGSREFLDSRGLHEREVGDLGPIYGFQWRHFGAKYTNM 153 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ++ ++ ++ P RR I+SAWN + +MALPPCH QFYV +G+LS Sbjct: 154 HADYTGQGVDQLAEVIHKIKTSPNDRRIILSAWNPPDLPEMALPPCHAFVQFYVCDGRLS 213 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGD+ LG+PFNIASYSLLT M+A + + +F+HT+GD H+Y NHF+ QL Sbjct: 214 CQLYQRSGDMGLGVPFNIASYSLLTHMIAHICDLEAEDFVHTIGDAHVYLNHFDALQEQL 273 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P++ I D+ F+YEDF L+ Y+ H I ++V Sbjct: 274 MREPKKFPKLNFKRKISDIDDFKYEDFELQDYQFHPTIKMDMAV 317 >gi|126650266|ref|ZP_01722494.1| thymidylate synthase [Bacillus sp. B14905] gi|126592916|gb|EAZ86898.1| thymidylate synthase [Bacillus sp. B14905] Length = 325 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 146/318 (45%), Positives = 186/318 (58%), Gaps = 57/318 (17%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V ELLWF+ Sbjct: 8 YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL +H IWDEWA Sbjct: 68 KGDTNIRYLLQHNNHIWDEWAFKKWVESDDYTGPDMTDFGRRCLVDDAFNTLYQQELASF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K GELG +YG QWR W G IDQ+ ++ ++ +P SRR IV+AW Sbjct: 128 CERVLADDDFAQKYGELGNVYGKQWRHWTTSTGESIDQLQDVIHQIKHNPDSRRIIVNAW 187 Query: 134 NVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 N + K ALPPCH +FQFYV NGKLSCQL QRS D LG PFNIASY+LLT Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVSNGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247 Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246 ++A G + GEFIH++GD H+Y NH EQ QL+R P+ LP + INPN + ED Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLAREPKELPTLHINPNKASIFDIELED 307 Query: 247 FTLRSYEPHAAILAKVSV 264 ++ Y+PH AI A ++V Sbjct: 308 LSIEGYDPHPAIKAPIAV 325 >gi|299537230|ref|ZP_07050533.1| thymidylate synthase [Lysinibacillus fusiformis ZC1] gi|298727471|gb|EFI68043.1| thymidylate synthase [Lysinibacillus fusiformis ZC1] Length = 325 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 147/318 (46%), Positives = 186/318 (58%), Gaps = 57/318 (17%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V ELLWF+ Sbjct: 8 YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADK------------------------------------- 86 +GD+N+ YL +H IWDEWA K Sbjct: 68 KGDTNIRYLLQHNNHIWDEWAFKKWVESDEYTGPDMTDFGRRCLVDESFNALYQKELASF 127 Query: 87 -------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W DG +DQ+ ++ ++ P SRR IV+AW Sbjct: 128 CERVLTDDDFAQQYGDLGNVYGKQWRHWTTSDGESLDQLQDVIHQIKHQPDSRRIIVNAW 187 Query: 134 NVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 N + K ALPPCH +FQFYV NGKLSCQL QRS D LG PFNIASY+LLT Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVANGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247 Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246 ++A G + GEFIH++GD H+Y NH EQ QLSR PR LP + INPN + ED Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLSREPRNLPTLHINPNKASIFDIELED 307 Query: 247 FTLRSYEPHAAILAKVSV 264 ++ Y+PH AI A ++V Sbjct: 308 LSIEGYDPHPAIKAPIAV 325 >gi|90961685|ref|YP_535601.1| thymidylate synthase [Lactobacillus salivarius UCC118] gi|227890773|ref|ZP_04008578.1| thymidylate synthase [Lactobacillus salivarius ATCC 11741] gi|301300762|ref|ZP_07206946.1| thymidylate synthase [Lactobacillus salivarius ACS-116-V-Col5a] gi|123391358|sp|Q1WU17|TYSY_LACS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|90820879|gb|ABD99518.1| Thymidylate synthase [Lactobacillus salivarius UCC118] gi|227867182|gb|EEJ74603.1| thymidylate synthase [Lactobacillus salivarius ATCC 11741] gi|300214485|gb|ADJ78901.1| Thymidylate synthase (TS) (TSase) [Lactobacillus salivarius CECT 5713] gi|300851612|gb|EFK79312.1| thymidylate synthase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 318 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 143/311 (45%), Positives = 190/311 (61%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+R +++ G ++ DRTG GT+S FGYQMRF+L++GFPLLTTKKV + + ELLWFL Sbjct: 8 YLQLIRDILEKGHEKSDRTGTGTKSLFGYQMRFNLAEGFPLLTTKKVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L H IWDEWA Sbjct: 68 RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRAQEDDNFNKVYQDEKKKF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 +K G LG +YG QWR W +G IDQI ++++++ +P SRR IV+AW Sbjct: 128 CQKIVEDQEFANKFGNLGDVYGAQWRHWQTRNGETIDQIKDVIETIKNNPDSRRMIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV++GKLSCQLYQRS DVFLG+PFNIASY+LLT M+A G Sbjct: 188 NPEDVPLSALPPCHTLFQFYVNDGKLSCQLYQRSADVFLGVPFNIASYALLTHMIARETG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y NH +Q + QL R P P + +NP +++ F ED +++Y Sbjct: 248 LEVGEFVHTLGDAHIYLNHLDQVNEQLQRKPNDAPTLWLNPEKKNIMDFEMEDIKVKNYH 307 Query: 254 PHAAILAKVSV 264 H+AI A V+V Sbjct: 308 SHSAIKAPVAV 318 >gi|195116595|ref|XP_002002839.1| GI10845 [Drosophila mojavensis] gi|193913414|gb|EDW12281.1| GI10845 [Drosophila mojavensis] Length = 310 Score = 354 bits (910), Expect = 5e-96, Method: Composition-based stats. Identities = 134/285 (47%), Positives = 182/285 (63%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL++ +I+ G +R DRT VGTRS FG QMRF+L FPLLTTK+V ++ V EL+W Sbjct: 26 EQYLDLIKRIIENGDERMDRTKVGTRSIFGAQMRFNLRDSFPLLTTKRVFFRGVAEELIW 85 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G ++ L + IWD + ++ G+LGP+YG QWR + Sbjct: 86 FIAGQTDAKILQEKNIHIWDGNSTREFLDKCGHTDREVGDLGPVYGFQWRHFGAKYGKCT 145 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159 DY G IDQ+ ++ ++R DP RR I+SAWN I +MALPPCHCL QFYV G+L Sbjct: 146 DDYTGQGIDQLKQVIDTIRNDPADRRIIMSAWNPLDIPQMALPPCHCLAQFYVSQSRGEL 205 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+YNNH Q Sbjct: 206 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYNNHVNPLLEQ 265 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R PR P+++ + ++ FRYEDF + Y P+ I +++V Sbjct: 266 MKREPRPFPKLVFKRQVTNIEDFRYEDFEIVGYNPYGKIQMEMAV 310 >gi|200003972|ref|YP_002221554.1| putatitve thymidylate synthase [Bacteroides phage B40-8] gi|198209669|gb|ACH81952.1| putatitve thymidylate synthase [Bacteroides phage B40-8] Length = 265 Score = 354 bits (910), Expect = 5e-96, Method: Composition-based stats. Identities = 144/265 (54%), Positives = 180/265 (67%), Gaps = 1/265 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ + +G R DRTG GT S FG Q +DL GFPL+TTKKV K ++HELL Sbjct: 1 MKQYLDLLKETLNYGEKRSDRTGTGTISLFGLQRSYDLRDGFPLVTTKKVFTKGIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L+GD+N+ YL+ +GV IWD+WA G+LG IYG QWR W +DQI S++ ++ Sbjct: 61 WMLKGDTNIKYLNENGVHIWDDWAKPSGDLGRIYGKQWRDWRINSKMKVDQIDSVIDMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNIA 179 +P SRR IVSAWNV I MALPPCHC FQFYV G L +LYQRS D+FLG+PFNIA Sbjct: 121 FNPESRRLIVSAWNVGEIHMMALPPCHCFFQFYVSESGYLDLKLYQRSADLFLGVPFNIA 180 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 SYS+L M A V G + FIHT+GD H+Y NH EQ QLSR P LP++ +NPN+ ++ Sbjct: 181 SYSILLSMAAQVCGLKPRRFIHTIGDGHIYLNHVEQVKEQLSREPFALPKLELNPNVRNI 240 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F+YED + Y H AI V+V Sbjct: 241 FDFKYEDIKIVDYNCHPAIKGDVAV 265 >gi|315640698|ref|ZP_07895800.1| thymidylate synthase [Enterococcus italicus DSM 15952] gi|315483453|gb|EFU73947.1| thymidylate synthase [Enterococcus italicus DSM 15952] Length = 315 Score = 354 bits (910), Expect = 5e-96, Method: Composition-based stats. Identities = 148/315 (46%), Positives = 187/315 (59%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL R ++ G+ + DRTG GT+S FG+QMRFDLS+GFPLLTTK+V + + EL Sbjct: 1 MEQAYLDLGRKILTEGNSKSDRTGTGTKSIFGHQMRFDLSEGFPLLTTKRVPFGLIKSEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84 LWF++GD+N+ YL +H IWDEWA Sbjct: 61 LWFIKGDTNIRYLLQHNNHIWDEWAFEKYVASDSYHGPDMTNFGRRSLEDDAFNEVYQNE 120 Query: 85 ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 D+ G+LG IYG QWR W G IDQ+ ++ ++ P SRR I Sbjct: 121 LAQFCERIVNDERFADEFGDLGHIYGYQWRHWDTAQGGFIDQLQDVIHQIKHTPDSRRMI 180 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 181 VSAWNPEDVPSMALPPCHTMFQFYVHEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIA 240 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 Q GEF+HTLGD HLY NHF+Q QL+RS R P++++NP + F D TL Sbjct: 241 HETNLQVGEFVHTLGDAHLYMNHFDQMTEQLTRSVRPAPKLVLNPEKQSIFDFDVADITL 300 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I A ++V Sbjct: 301 EGYDPHPTIKAPIAV 315 >gi|322383990|ref|ZP_08057720.1| thymidylate synthase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151467|gb|EFX44654.1| thymidylate synthase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 318 Score = 354 bits (910), Expect = 5e-96, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 188/313 (60%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YL+L RHV++ G + DRTG GT S FGYQMRF+L +GFPLLTTK++ ++ +V ELLW Sbjct: 6 QAYLELCRHVLEHGEIKEDRTGTGTVSLFGYQMRFNLQEGFPLLTTKRIPFRLIVSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL H IWDEWA K Sbjct: 66 FIKGDTNIRYLLEHNNHIWDEWAFKHYVESSSYQGPDMTDFGLRSQRDEAFLIQYEEQMN 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G+LG +YG QWR+W +G IDQ+ I+ +++ +P SRR IVS Sbjct: 126 KFTERILKDPQFALEFGDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I M LPPCH LFQFYV G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 186 AWNPEDIPSMVLPPCHTLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHTLGD H+Y+NH +Q LQLSR P+ LP + INP + + D L Sbjct: 246 CGIEAGEFIHTLGDAHVYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEG 305 Query: 252 YEPHAAILAKVSV 264 Y+PH +I A V+V Sbjct: 306 YDPHPSIKAPVAV 318 >gi|21702230|emb|CAD38046.1| dihydrofolate reductase-thymidylate synthase [Pisum sativum] Length = 530 Score = 354 bits (910), Expect = 5e-96, Method: Composition-based stats. Identities = 130/283 (45%), Positives = 174/283 (61%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL+L++ +I G+ + DRTG GT S FG QMRF+L +GFPLLTTK+V W+ VV ELLW Sbjct: 248 YMYLNLVQEIISQGTSKGDRTGTGTLSKFGCQMRFNLRRGFPLLTTKRVFWRGVVEELLW 307 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G +N L G+ IWD+ A ++G+LGP+YG QWR + Sbjct: 308 FISGSTNAKVLQEKGIHIWDDNASREFLDSIGLSEREEGDLGPVYGFQWRHFGARYTNMH 367 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ ++ +P RR I+SAWN A + MALPPCH QFYV NG+LSC Sbjct: 368 NDYAGQGVDQLLDVINKVKHNPDDRRIILSAWNPADLKLMALPPCHMSAQFYVANGELSC 427 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+ QRS D+ LG+PFNIASY+LLT M+A + G+FIH LGD H+Y H QL Sbjct: 428 QMNQRSADMGLGVPFNIASYALLTCMIAHICELVPGDFIHVLGDAHVYQTHVRPLQEQLH 487 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + IN D+ SF DF L Y+PH I K++V Sbjct: 488 NLPKPFPTLKINSKKKDIDSFVATDFKLIDYDPHQKIEMKMAV 530 >gi|195454454|ref|XP_002074244.1| GK18389 [Drosophila willistoni] gi|194170329|gb|EDW85230.1| GK18389 [Drosophila willistoni] Length = 340 Score = 354 bits (910), Expect = 6e-96, Method: Composition-based stats. Identities = 133/285 (46%), Positives = 183/285 (64%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDLLR +I+ G R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V ELLW Sbjct: 56 EQYLDLLRSIIERGETRIDRTRVGTLSIFGSQMRFDMRESFPLLTTKRVFFRAVAEELLW 115 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F++G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 116 FIKGKTDAKILQDKNVHIWDGNSTREFLDNLGFTDRAVGDLGPVYGFQWRHFGAEYRTCQ 175 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159 DY G +DQ+ ++++++ +P RR I+SAWN I KMALPPCHCL QFYV G+L Sbjct: 176 DDYTGQGVDQLRQVIETIKTNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQSRGEL 235 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y +H E Q Sbjct: 236 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLSHVEPIKEQ 295 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R+PR P++ + D+ F YED + +Y P+ I +++V Sbjct: 296 LKRTPRPFPKLAFKRQVTDIEDFTYEDIEVVNYNPYPKIQMEMAV 340 >gi|257887704|ref|ZP_05667357.1| thymidylate synthase [Enterococcus faecium 1,141,733] gi|257896198|ref|ZP_05675851.1| thymidylate synthase [Enterococcus faecium Com12] gi|293377199|ref|ZP_06623407.1| thymidylate synthase [Enterococcus faecium PC4.1] gi|257823758|gb|EEV50690.1| thymidylate synthase [Enterococcus faecium 1,141,733] gi|257832763|gb|EEV59184.1| thymidylate synthase [Enterococcus faecium Com12] gi|292644219|gb|EFF62321.1| thymidylate synthase [Enterococcus faecium PC4.1] Length = 315 Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats. Identities = 150/315 (47%), Positives = 184/315 (58%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + EL Sbjct: 1 MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84 LWFL+GD+N+ YL ++ IWDEWA Sbjct: 61 LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLTDPEFNEEYKKQ 120 Query: 85 ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 +K G LG IYG QWR W DG IDQI ++++++ P SRR I Sbjct: 121 SKLFCEKILTDDSFAEKYGNLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLI 180 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A Sbjct: 181 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 240 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G + GEF+HTLGD HLY NH EQ QLSR R P + +N + F ED L Sbjct: 241 HETGLEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQL 300 Query: 250 RSYEPHAAILAKVSV 264 Y+PH I A ++V Sbjct: 301 EGYDPHPTIKAPIAV 315 >gi|168012488|ref|XP_001758934.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690071|gb|EDQ76440.1| predicted protein [Physcomitrella patens subsp. patens] Length = 520 Score = 354 bits (909), Expect = 7e-96, Method: Composition-based stats. Identities = 133/283 (46%), Positives = 173/283 (61%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L+ +IK G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW Sbjct: 238 YQYLNLIDDIIKTGAVKGDRTGTGTISKFGCQMRFNLRKSFPLLTTKRVFWRGVVEELLW 297 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G +N LH GV IWD ++G+LGP+YG QWR + Sbjct: 298 FISGSTNAKVLHDKGVKIWDGNGSREYLDKQGLTEREEGDLGPVYGFQWRHFGAKYVDMH 357 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ DP RR ++SAWN A + MALPPCH QFYV NG+LSC Sbjct: 358 ADYTGQGYDQLKDVINKIKTDPDDRRILLSAWNPADLKLMALPPCHMFAQFYVANGELSC 417 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT +LA V G+F+H LGD H+Y NH E QL Sbjct: 418 QMYQRSCDMGLGVPFNIASYALLTCILAHVCDLVPGDFVHVLGDAHVYKNHVEPLQEQLQ 477 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +P P++ I D+ SF DF L Y+ H I ++V Sbjct: 478 NTPMPFPRLRIKTANRDIDSFVAADFELIGYKAHQKINMIMAV 520 >gi|315226195|ref|ZP_07867983.1| thymidylate synthase [Parascardovia denticolens DSM 10105] gi|315120327|gb|EFT83459.1| thymidylate synthase [Parascardovia denticolens DSM 10105] Length = 291 Score = 354 bits (909), Expect = 8e-96, Method: Composition-based stats. Identities = 151/266 (56%), Positives = 193/266 (72%), Gaps = 6/266 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL R ++ GS + DRTG GT S FG QMRFDLS+ FPL+TTK V +K V +ELLWFL Sbjct: 27 YEDLAREILMTGSLKSDRTGTGTISLFGKQMRFDLSRSFPLITTKSVWFKGVSYELLWFL 86 Query: 64 RGDSNVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQS 118 +G SNV +L + V IWDEWAD + GELGP+YGVQWRSWP D IDQI++++Q Sbjct: 87 KGSSNVRWLQENKVHIWDEWADPETGELGPVYGVQWRSWPAPTKDDSHRTIDQIANVLQM 146 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 ++ +P SRR IVSAWN A +++MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNI Sbjct: 147 IKDNPDSRRMIVSAWNPAEVERMALPPCHALFQFYVADGRLSCQLYQRSADMFLGVPFNI 206 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 ASYSLLT M+A G + GEF+ T GD H+Y+NH +Q QLSR P PQ++++ Sbjct: 207 ASYSLLTCMMAQQTGLEPGEFVWTGGDCHIYDNHVDQFLEQLSRQPYPYPQLVMD-KADS 265 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 L ++YEDF + +Y+ A I A V+V Sbjct: 266 LFDYQYEDFHVLNYQHGAKIAAPVAV 291 >gi|169828204|ref|YP_001698362.1| thymidylate synthase [Lysinibacillus sphaericus C3-41] gi|168992692|gb|ACA40232.1| Thymidylate synthase [Lysinibacillus sphaericus C3-41] Length = 325 Score = 354 bits (909), Expect = 8e-96, Method: Composition-based stats. Identities = 146/318 (45%), Positives = 186/318 (58%), Gaps = 57/318 (17%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V ELLWF+ Sbjct: 8 YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL +H IWDEWA Sbjct: 68 KGDTNIRYLLQHNNHIWDEWAFKRWVESDDYTGPDMTDFGRRCLVDDAFNTMYQQELASF 127 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K GELG +YG QWR W G IDQ+ ++ ++ +P SRR IV+AW Sbjct: 128 CERVLADDDFAQKYGELGNVYGKQWRHWSTSTGESIDQLQDVIHQIKHNPDSRRIIVNAW 187 Query: 134 NVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 N + K ALPPCH +FQFYV NGKLSCQL QRS D LG PFNIASY+LLT Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVSNGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247 Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246 ++A G + GEFIH++GD H+Y NH EQ QL+R P+ LP + INPN + ED Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLAREPKDLPTLHINPNKTSIFDIELED 307 Query: 247 FTLRSYEPHAAILAKVSV 264 ++ Y+PH AI A ++V Sbjct: 308 LSIEGYDPHPAIKAPIAV 325 >gi|225023101|ref|ZP_03712293.1| hypothetical protein CORMATOL_03149 [Corynebacterium matruchotii ATCC 33806] gi|224944324|gb|EEG25533.1| hypothetical protein CORMATOL_03149 [Corynebacterium matruchotii ATCC 33806] Length = 272 Score = 354 bits (908), Expect = 8e-96, Method: Composition-based stats. Identities = 155/261 (59%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S F Q+RFDL++ FPL+TTK+VH+ SVV ELLWFL Sbjct: 13 YEDLLRKILAEGTHKNDRTGTGTTSLFAQQLRFDLAESFPLITTKQVHFHSVVGELLWFL 72 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 G SNV++L +G+ IW+EWAD GELGP+YGVQWRSWP DG +DQIS+ + LRADP Sbjct: 73 SGSSNVAWLQENGIRIWNEWADDQGELGPVYGVQWRSWPTPDGRYVDQISASLAMLRADP 132 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV + KMALPPCH LFQ YV + +LSCQ+YQRS D+FLG+PFNIASYSL Sbjct: 133 DSRRNIVSAWNVGELPKMALPPCHLLFQLYVADNRLSCQVYQRSADMFLGVPFNIASYSL 192 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 L MLA G + GE I T GD H+Y+NH EQ LQL+R PR PQ+ + DL S+ Sbjct: 193 LAHMLAQQAGLRVGELIWTGGDCHIYDNHREQVALQLTRDPRPYPQLEL-RKAADLFSYT 251 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + D +R Y+PH I A+VSV Sbjct: 252 FSDVVVRGYDPHPRIPARVSV 272 >gi|332373384|gb|AEE61833.1| unknown [Dendroctonus ponderosae] Length = 320 Score = 354 bits (908), Expect = 9e-96, Method: Composition-based stats. Identities = 134/284 (47%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL+ ++ +++ G DRTGVGT S FG QMR+ L FPLLTTK+V W++VV ELL Sbjct: 37 HQYLNHIKLILEKGVKTADRTGVGTYSIFGAQMRYSLRDNIFPLLTTKRVFWRAVVEELL 96 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF+RG +N L V IWD + ++G+LGPIYG QWR + Sbjct: 97 WFIRGSTNAFELKDKNVHIWDANSTREFLDSVSLKDREEGDLGPIYGFQWRHFGAEYKGM 156 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY IDQ++ ++ ++R P RR I+ AWN I +MALPPCHCL QFYV NG+LS Sbjct: 157 RADYKNKGIDQLAHVINTIRNKPTDRRMIMCAWNPVDIPEMALPPCHCLVQFYVANGELS 216 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A + Q GEFIH+LGD H+Y NH E Q+ Sbjct: 217 CQLYQRSADMGLGVPFNIASYALLTYMIAHITNLQPGEFIHSLGDSHVYLNHVEPLKEQI 276 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I + + F EDF + Y PH + ++V Sbjct: 277 EREPRPFPTLQIKRKVETIEDFTAEDFEIVGYNPHPKLSMVMAV 320 >gi|163791087|ref|ZP_02185507.1| thymidylate synthase [Carnobacterium sp. AT7] gi|159873643|gb|EDP67727.1| thymidylate synthase [Carnobacterium sp. AT7] Length = 315 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 139/312 (44%), Positives = 190/312 (60%), Gaps = 50/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL+L R V++ G+++ DRTG GT+S FG+QMRF+L +GFPLLTTK+V + + ELLWF Sbjct: 4 EYLNLARKVLEVGNEKTDRTGTGTKSLFGHQMRFNLQEGFPLLTTKRVPFSLIKSELLWF 63 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK------------------------------------ 86 ++G++N+ YL +H IWDEWA + Sbjct: 64 IKGNTNIRYLLQHNNHIWDEWAFERFVKSEDYKGPDMTNFGRKSLIDSEFNTLYLKEKEA 123 Query: 87 --------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 GELG +YG QWR W G IDQ+ +++ ++ P SRR +VSA Sbjct: 124 FCTRILEDETFALQYGELGNVYGAQWRKWKTTQGETIDQLKDVIKLIKTSPDSRRMLVSA 183 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 WNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAHET 243 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEF+HTLGD HLY+NH EQ + QL+R P+ LP +I+N + + F +D + Y Sbjct: 244 GLEVGEFVHTLGDAHLYSNHIEQINKQLAREPKELPTLILNSSKTSIFDFEMDDIKIEGY 303 Query: 253 EPHAAILAKVSV 264 +PH I A ++V Sbjct: 304 DPHPGIKAPIAV 315 >gi|195161930|ref|XP_002021809.1| GL26706 [Drosophila persimilis] gi|194103609|gb|EDW25652.1| GL26706 [Drosophila persimilis] Length = 330 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 136/285 (47%), Positives = 182/285 (63%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL++++I G R DRT VGT S FG Q+RFD+ FPLLTTK+V +++VV EL+W Sbjct: 46 QQYLDLIQYIIGNGERRIDRTNVGTLSVFGSQLRFDMRLSFPLLTTKRVFFRAVVEELIW 105 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 106 FVGGKTDAKLLQAKNVHIWDGNSTREYLDKLGHTDRAVGDLGPVYGFQWRHFGAEYGTCD 165 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159 DY G IDQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QFYV G+L Sbjct: 166 DDYSGKGIDQLRQVIDTIRHNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGEL 225 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+FIHT+GD H+Y NH + Q Sbjct: 226 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKTGDFIHTMGDAHVYLNHVDPLKEQ 285 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R PR P++ I + ++ FRYEDF + YEP+ I ++V Sbjct: 286 LKRKPRPFPKLNIKRQVENIEDFRYEDFEIIGYEPYPKIKMDMAV 330 >gi|294786608|ref|ZP_06751862.1| thymidylate synthase [Parascardovia denticolens F0305] gi|294485441|gb|EFG33075.1| thymidylate synthase [Parascardovia denticolens F0305] Length = 289 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 151/266 (56%), Positives = 193/266 (72%), Gaps = 6/266 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL R ++ GS + DRTG GT S FG QMRFDLS+ FPL+TTK V +K V +ELLWFL Sbjct: 25 YEDLAREILMTGSLKSDRTGTGTISLFGKQMRFDLSRSFPLITTKSVWFKGVSYELLWFL 84 Query: 64 RGDSNVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQS 118 +G SNV +L + V IWDEWAD + GELGP+YGVQWRSWP D IDQI++++Q Sbjct: 85 KGSSNVRWLQENKVHIWDEWADPETGELGPVYGVQWRSWPAPTKDDSHRTIDQIANVLQM 144 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 ++ +P SRR IVSAWN A +++MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNI Sbjct: 145 IKDNPDSRRMIVSAWNPAEVERMALPPCHALFQFYVADGRLSCQLYQRSADMFLGVPFNI 204 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 ASYSLLT M+A G + GEF+ T GD H+Y+NH +Q QLSR P PQ++++ Sbjct: 205 ASYSLLTCMMAQQTGLEPGEFVWTGGDCHIYDNHVDQFLEQLSRQPYPYPQLVMD-KADS 263 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 L ++YEDF + +Y+ A I A V+V Sbjct: 264 LFDYQYEDFHVLNYQHGAKIAAPVAV 289 >gi|305681854|ref|ZP_07404658.1| thymidylate synthase [Corynebacterium matruchotii ATCC 14266] gi|305658327|gb|EFM47830.1| thymidylate synthase [Corynebacterium matruchotii ATCC 14266] Length = 272 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 156/261 (59%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLLR ++ G+ + DRTG GT S F Q+RFDL++ FPL+TTK+VH+ SVV ELLWFL Sbjct: 13 YEDLLRKILAEGTHKNDRTGTGTTSLFAQQLRFDLAESFPLITTKQVHFHSVVGELLWFL 72 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 G SNV++L +G+ IW+EWAD GELGP+YGVQWRSWP DG +DQIS+ + LRADP Sbjct: 73 SGSSNVAWLQENGIRIWNEWADDQGELGPVYGVQWRSWPTPDGGYVDQISASLAMLRADP 132 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR+IVSAWNV + KMALPPCH LFQ YV + +LSCQ+YQRS D+FLG+PFNIASYSL Sbjct: 133 DSRRNIVSAWNVGELPKMALPPCHLLFQLYVADNRLSCQVYQRSADMFLGVPFNIASYSL 192 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT MLA G + GE I T GD H+Y+NH EQ LQL+R PR PQ+ + DL S+ Sbjct: 193 LTHMLAQQAGLRVGELIWTGGDCHIYDNHREQVALQLTRDPRPYPQLEL-RKAADLFSYT 251 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 + D +R Y PH I A+VSV Sbjct: 252 FSDVAVRGYNPHPRIPARVSV 272 >gi|50843135|ref|YP_056362.1| thymidylate synthase [Propionibacterium acnes KPA171202] gi|282855010|ref|ZP_06264342.1| thymidylate synthase [Propionibacterium acnes J139] gi|62901287|sp|Q6A761|TYSY_PROAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|50840737|gb|AAT83404.1| thymidylate synthase [Propionibacterium acnes KPA171202] gi|282581598|gb|EFB86983.1| thymidylate synthase [Propionibacterium acnes J139] gi|313763382|gb|EFS34746.1| thymidylate synthase [Propionibacterium acnes HL013PA1] gi|313814694|gb|EFS52408.1| thymidylate synthase [Propionibacterium acnes HL059PA1] gi|313828240|gb|EFS65954.1| thymidylate synthase [Propionibacterium acnes HL063PA2] gi|314914540|gb|EFS78371.1| thymidylate synthase [Propionibacterium acnes HL005PA4] gi|314917608|gb|EFS81439.1| thymidylate synthase [Propionibacterium acnes HL050PA1] gi|314919636|gb|EFS83467.1| thymidylate synthase [Propionibacterium acnes HL050PA3] gi|314930291|gb|EFS94122.1| thymidylate synthase [Propionibacterium acnes HL067PA1] gi|314956850|gb|EFT01004.1| thymidylate synthase [Propionibacterium acnes HL027PA1] gi|314957647|gb|EFT01750.1| thymidylate synthase [Propionibacterium acnes HL002PA1] gi|314967396|gb|EFT11495.1| thymidylate synthase [Propionibacterium acnes HL082PA2] gi|314982115|gb|EFT26208.1| thymidylate synthase [Propionibacterium acnes HL110PA3] gi|315090354|gb|EFT62330.1| thymidylate synthase [Propionibacterium acnes HL110PA4] gi|315093637|gb|EFT65613.1| thymidylate synthase [Propionibacterium acnes HL060PA1] gi|315098007|gb|EFT69983.1| thymidylate synthase [Propionibacterium acnes HL059PA2] gi|315102647|gb|EFT74623.1| thymidylate synthase [Propionibacterium acnes HL046PA1] gi|315104462|gb|EFT76438.1| thymidylate synthase [Propionibacterium acnes HL050PA2] gi|315106205|gb|EFT78181.1| thymidylate synthase [Propionibacterium acnes HL030PA1] gi|315110462|gb|EFT82438.1| thymidylate synthase [Propionibacterium acnes HL030PA2] gi|327325477|gb|EGE67281.1| thymidylate synthase [Propionibacterium acnes HL103PA1] gi|327451226|gb|EGE97880.1| thymidylate synthase [Propionibacterium acnes HL087PA3] gi|327452583|gb|EGE99237.1| thymidylate synthase [Propionibacterium acnes HL083PA2] gi|328754777|gb|EGF68393.1| thymidylate synthase [Propionibacterium acnes HL087PA1] Length = 269 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 7/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG IDQI+++V+ +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVEQIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA I +MALPPCH LFQFYV LSCQLYQRSGD FLG+ Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I D+ F D TL Y+P+ A+ A ++V Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269 >gi|116492833|ref|YP_804568.1| thymidylate synthase [Pediococcus pentosaceus ATCC 25745] gi|122265703|sp|Q03F96|TYSY_PEDPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116102983|gb|ABJ68126.1| thymidylate synthase [Pediococcus pentosaceus ATCC 25745] Length = 316 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 144/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R+V++ G + DRT GT STFGYQMRFDLS+GFPLLTTK+V + + ELLW Sbjct: 4 EQYLNLERYVLENGHLKGDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FL+GD+N+ YL +H IWDEW Sbjct: 64 FLKGDTNIRYLLQHNNHIWDEWAFKKWVESDEYQGPDMTDFGHRSLTDPEFNELYKIEKQ 123 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + K G+LG +YG QWR+W G IDQIS+++ ++ +P SRR IVS Sbjct: 124 RFTEQILEDDTFSAKYGDLGNVYGSQWRAWKTSTGETIDQISNVIDMIKNNPNSRRMIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTSALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYALLTELIAKA 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT+GD H+Y+NH +Q QL R+PR P++ + + D + Sbjct: 244 TGLEVGEFIHTIGDAHIYSNHLDQVKEQLERTPRPAPKLKFKQVHDSIFDYEPGDIVVEG 303 Query: 252 YEPHAAILAKVSV 264 Y+PH I A V+V Sbjct: 304 YDPHPTIKAPVAV 316 >gi|237748057|ref|ZP_04578537.1| thymidylate synthetase [Oxalobacter formigenes OXCC13] gi|229379419|gb|EEO29510.1| thymidylate synthetase [Oxalobacter formigenes OXCC13] Length = 277 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 145/276 (52%), Positives = 196/276 (71%), Gaps = 14/276 (5%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+LL+ ++ G D+ DRTG GTR+ FG MR DL G PLLTTK++H +S++HELLW Sbjct: 3 RQYLNLLQEILDCGIDKGDRTGTGTRAVFGRMMRHDLKNGLPLLTTKRLHIRSIIHELLW 62 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G +NV YL+ + V+IWDEWA ++GELGPIYG QWR+W DG +IDQ++ ++ S+R Sbjct: 63 FLQGGTNVQYLNENKVTIWDEWATENGELGPIYGAQWRAWEGSDGRIIDQVAGVIDSIRT 122 Query: 122 DPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +P SRRHI+SAWNVAL+ KMAL PCH ++QF V G+LSC + QRSG Sbjct: 123 NPDSRRHIISAWNVALLPSEKMSPQENVRAGKMALAPCHVMYQFQVAAGRLSCMMTQRSG 182 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+FLGIP+N AS + LT M+A + GE IH++GD+HLY NHF+QA LQLSR PR LP Sbjct: 183 DIFLGIPYNTASTAFLTHMIAQQCDLEPGEIIHSIGDLHLYTNHFDQAKLQLSREPRALP 242 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++ + +R+EDF + Y+PH AI A ++V Sbjct: 243 TLKLD-KKPSIFDYRFEDFEVIGYDPHPAIAAPIAV 277 >gi|71066565|ref|YP_265292.1| thymidylate synthase [Psychrobacter arcticus 273-4] gi|71039550|gb|AAZ19858.1| thymidylate synthase [Psychrobacter arcticus 273-4] Length = 300 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 148/279 (53%), Positives = 199/279 (71%), Gaps = 16/279 (5%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLLR V+ G+++ DRTG GT S FG Q+RFDL+ GFPLLTTKKVH+KS+++ELLW Sbjct: 22 QAYLDLLRLVLSEGTEKGDRTGTGTVSHFGAQLRFDLADGFPLLTTKKVHFKSIIYELLW 81 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DYD 105 FL G ++V YL ++GV IW+EWA + G+LGPIYG QWR++ YD Sbjct: 82 FLSGSTHVDYLQQNGVRIWNEWATAEQTARFKRLAGDLGPIYGHQWRNYGATKVEDGSYD 141 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 + DQIS +++ ++ +P SRR IVS WN +++ALPPCH +FQF+V + KLSCQLYQ Sbjct: 142 NDGFDQISQVIEQIKTNPNSRRLIVSGWNPGEAEQVALPPCHTMFQFFVADNKLSCQLYQ 201 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D+FLG+PFNIASY+LLT M+A V + GEFI T GD H+Y NH EQ +LQL+R Sbjct: 202 RSADLFLGVPFNIASYALLTHMVAQVCDLEVGEFIWTGGDCHIYQNHREQVELQLTRELY 261 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 TLP + +NP++ D+ +F Y+D ++ YE H AI A+V+V Sbjct: 262 TLPTLTLNPDVQDIFAFNYDDISVNGYESHPAIKAQVAV 300 >gi|295396869|ref|ZP_06806997.1| thymidylate synthase [Aerococcus viridans ATCC 11563] gi|294974895|gb|EFG50594.1| thymidylate synthase [Aerococcus viridans ATCC 11563] Length = 317 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 148/313 (47%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLD L+H++ G D+ DRTGVGTRS FGYQMRFDLS+GFPLLTTKKV + + ELLW Sbjct: 5 KQYLDFLQHILDNGQDKSDRTGVGTRSVFGYQMRFDLSEGFPLLTTKKVPFGLIKSELLW 64 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL+GD+N+ YL + IWDEWA Sbjct: 65 FLKGDTNIRYLLENNNHIWDEWAFKRWVESDAYQGPDMTDFGLRADADPEFKKVYQEVKQ 124 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + GELG +YG QWR W +G+ IDQI++I+ L+ +P SRR I+S Sbjct: 125 AFCQRVLEDDDFAREFGELGNVYGKQWRHWETREGDSIDQIANIIDQLKHNPDSRRIILS 184 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH + QFYV +GKLSCQLYQRSGD FLG+PFNIASY+LLT +LA Sbjct: 185 AWNPEDVPDMALPPCHTMSQFYVQDGKLSCQLYQRSGDAFLGVPFNIASYALLTHLLARE 244 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + G+++HT GD H+YNNHF Q QLSR P LP + I + +D ++ Sbjct: 245 AGLEVGDYVHTFGDAHIYNNHFNQVYEQLSRQPLDLPTLEIGGEGKSIFDLEKDDIKVKG 304 Query: 252 YEPHAAILAKVSV 264 Y+ H AI A V+V Sbjct: 305 YKAHDAIKAPVAV 317 >gi|225717296|gb|ACO14494.1| Thymidylate synthase [Esox lucius] Length = 319 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 125/281 (44%), Positives = 173/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+ ++++ G + DRTG G S FG Q R+ L FPLLTTK+V WK ++ ELLWF+ Sbjct: 39 YLNQCEYILQHGHRKGDRTGTGVISVFGSQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103 +G +N L GV IWD +D G+LGP+YG QW + D Sbjct: 99 KGSTNAKGLSEKGVKIWDANGSRDFLDKMGFTDREEGDLGPVYGFQWWHFGAEYSNMHTD 158 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G +DQ+ +++ +++ +P RR I+ AWN + MALPPCH L QFYV +G+LSCQL Sbjct: 159 YTGKGVDQLQNVIDTIKTNPEDRRIIMCAWNPKDLPHMALPPCHALCQFYVIDGELSCQL 218 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R Sbjct: 219 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYINHVEPLKVQLQRE 278 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ I + + FR EDF + Y PH I +++V Sbjct: 279 IRPFPKLKILRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 319 >gi|69246745|ref|ZP_00604093.1| Thymidylate synthase [Enterococcus faecium DO] gi|314938020|ref|ZP_07845330.1| thymidylate synthase [Enterococcus faecium TX0133a04] gi|314941994|ref|ZP_07848855.1| thymidylate synthase [Enterococcus faecium TX0133C] gi|314948753|ref|ZP_07852125.1| thymidylate synthase [Enterococcus faecium TX0082] gi|314951771|ref|ZP_07854810.1| thymidylate synthase [Enterococcus faecium TX0133A] gi|314991822|ref|ZP_07857280.1| thymidylate synthase [Enterococcus faecium TX0133B] gi|314995863|ref|ZP_07860950.1| thymidylate synthase [Enterococcus faecium TX0133a01] gi|68195099|gb|EAN09559.1| Thymidylate synthase [Enterococcus faecium DO] gi|313589967|gb|EFR68812.1| thymidylate synthase [Enterococcus faecium TX0133a01] gi|313593633|gb|EFR72478.1| thymidylate synthase [Enterococcus faecium TX0133B] gi|313596050|gb|EFR74895.1| thymidylate synthase [Enterococcus faecium TX0133A] gi|313599246|gb|EFR78091.1| thymidylate synthase [Enterococcus faecium TX0133C] gi|313642595|gb|EFS07175.1| thymidylate synthase [Enterococcus faecium TX0133a04] gi|313644819|gb|EFS09399.1| thymidylate synthase [Enterococcus faecium TX0082] Length = 324 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 150/315 (47%), Positives = 185/315 (58%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + EL Sbjct: 10 MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86 LWFL+GD+N+ YL ++ IWDEWA + Sbjct: 70 LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQ 129 Query: 87 -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 G+LG IYG QWR W DG IDQI ++++++ P SRR I Sbjct: 130 SKLFCEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKQVIEAIKKTPDSRRLI 189 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A Sbjct: 190 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 249 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G GEF+HTLGD HLY NH EQ QLSR R P +++N + F ED L Sbjct: 250 HETGLAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQL 309 Query: 250 RSYEPHAAILAKVSV 264 Y+PH AI A ++V Sbjct: 310 EGYDPHPAIKAPIAV 324 >gi|305664605|ref|YP_003860892.1| thymidylate synthase [Maribacter sp. HTCC2170] gi|88708622|gb|EAR00858.1| thymidylate synthase [Maribacter sp. HTCC2170] Length = 274 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 160/277 (57%), Positives = 206/277 (74%), Gaps = 16/277 (5%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DLL+ V+K G + DRTG GT S FG+QMRFDLS+GFP++TTKK+H KS+VHELL Sbjct: 1 MKQYHDLLKQVLKDGCQKGDRTGTGTLSVFGHQMRFDLSEGFPMVTTKKLHLKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N++YL +GV IW+EWAD+ G+LGP+YG QWR+W + IDQI +V SL+ Sbjct: 61 WFLKGETNIAYLQENGVRIWNEWADEKGDLGPVYGHQWRNW---NSEEIDQIKEVVHSLK 117 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR +VSAWN +++ K ALPPCH FQFYV +GKLSCQLYQRS Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVGNGKAALPPCHAFFQFYVADGKLSCQLYQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG+PFNIASY+L TMM+A V G++ GEFIH GD H+YNNH EQ +LQLSR PR L Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEPGEFIHAFGDAHIYNNHMEQVELQLSREPRPL 237 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+M+INP + D+ F+++DF+L Y PH I V+V Sbjct: 238 PKMVINPEVKDIFDFKFDDFSLVDYNPHPHIKGVVAV 274 >gi|93007138|ref|YP_581575.1| thymidylate synthase [Psychrobacter cryohalolentis K5] gi|123264366|sp|Q1Q8B2|TYSY_PSYCK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|92394816|gb|ABE76091.1| thymidylate synthase [Psychrobacter cryohalolentis K5] Length = 290 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 151/279 (54%), Positives = 198/279 (70%), Gaps = 16/279 (5%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLLR V+ G+++ DRTG GT S FG Q+RF+L+ GFPLLTTKKVH KS+ +ELLW Sbjct: 12 QAYLDLLRLVLNEGTEKGDRTGTGTLSHFGAQLRFNLADGFPLLTTKKVHLKSITYELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP---DYDGN-- 107 FL G ++V YL ++GV IW+EWA + G+LGPIYG QWR++ DG Sbjct: 72 FLNGSTHVDYLQQNGVRIWNEWATSEQTARFNRPAGDLGPIYGHQWRNYGATTTADGQYN 131 Query: 108 --VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI+ +V+ ++ +P SRR IVS WN D++ALPPCH LFQF+V + KLSCQLYQ Sbjct: 132 SDGVDQIAQVVEQIKTNPNSRRLIVSGWNPGEADQVALPPCHTLFQFFVADNKLSCQLYQ 191 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D+FLG+PFNIASY++LT M+A V + GEFI T GD H+Y NH EQ +LQL+RS Sbjct: 192 RSADLFLGVPFNIASYAMLTHMVAQVCNLEVGEFIWTGGDCHIYQNHREQVELQLTRSLY 251 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 TLP + +NPN+ D+ +F YED ++ YE H AI A+V+V Sbjct: 252 TLPTLALNPNVKDIFAFNYEDISVDGYESHPAIKAQVAV 290 >gi|157135461|ref|XP_001663452.1| bifunctional dihydrofolate reductase-thymidylate synthase [Aedes aegypti] gi|108870229|gb|EAT34454.1| bifunctional dihydrofolate reductase-thymidylate synthase [Aedes aegypti] Length = 313 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 130/283 (45%), Positives = 174/283 (61%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYL+ ++ +I G R DRTGVGT S FG QMR+ L PLLTTK+V ++ V ELLW Sbjct: 31 QYLEAIQRIIDTGDKRVDRTGVGTLSIFGTQMRYSLRDNVIPLLTTKRVFFRGVAEELLW 90 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG +N L V IWD + ++ G+LGP+YG QWR + Sbjct: 91 FIRGSTNAKDLQAKNVHIWDGNSTREFLDASGFTDRDEGDLGPVYGFQWRHFGAKYKTCN 150 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G IDQ++ ++ ++ +P RR I+SAWN I +MALPPCHCL QF+V NG+LSC Sbjct: 151 DDYTGQGIDQLAEVINRIKTNPTDRRIIMSAWNPIDIPQMALPPCHCLAQFFVANGELSC 210 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASY+LLT M+A V G + GEFIHT GD H+Y NH E QL Sbjct: 211 QLYQRSADMGLGVPFNIASYALLTHMMAHVTGLKAGEFIHTTGDTHVYLNHVEPLKEQLQ 270 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + ++ + F DF + Y+P+ I +++V Sbjct: 271 RVPKRFPTLQFKRHVQSIDEFEMGDFEVCGYDPYPTIKMQMAV 313 >gi|314924266|gb|EFS88097.1| thymidylate synthase [Propionibacterium acnes HL001PA1] Length = 269 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 159/270 (58%), Positives = 198/270 (73%), Gaps = 7/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG IDQI+++V +R Sbjct: 61 WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVDQIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA I +MALPPCH LFQFYV LSCQLYQRSGD FLG+ Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I D+ F D TL Y+P+ A+ A ++V Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269 >gi|241781388|ref|XP_002400276.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] gi|215510710|gb|EEC20163.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] Length = 287 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 136/284 (47%), Positives = 181/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+H+++ G ++DRTGVGT S FG Q R+ L G PLLTTK+V W+ VV ELL Sbjct: 4 YQYLKTLKHILENGKKKKDRTGVGTMSIFGVQCRYSLRNGTMPLLTTKRVFWRGVVEELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG ++ L G+ IWD+ ++G+LGP+YG QWR + Sbjct: 64 WFLRGSTDAKELSERGIHIWDQNGSRRFLDSLGFFDREEGDLGPVYGFQWRHFGATYRNS 123 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY +DQI+ +V+ ++ DP RR I+ +WN I KM LPPCHCL QFYVD+ +LS Sbjct: 124 HTDYGNEGVDQITRLVEIIKNDPNDRRMILCSWNPTDIKKMVLPPCHCLAQFYVDDDELS 183 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V G + GEF+H LGD H+Y NH E QL Sbjct: 184 CQLYQRSADMGLGVPFNIASYALLTHMMAKVTGKRPGEFVHNLGDAHIYLNHVESVKQQL 243 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I ++ D+ FR +DF L Y P+ I ++SV Sbjct: 244 EREPRPFPKLRIRRDVTDIFDFRCDDFELIDYNPYPKIKMEMSV 287 >gi|313618225|gb|EFR90295.1| thymidylate synthase [Listeria innocua FSL S4-378] Length = 314 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKARILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|257884869|ref|ZP_05664522.1| thymidylate synthase [Enterococcus faecium 1,231,501] gi|261207592|ref|ZP_05922277.1| thymidylate synthase [Enterococcus faecium TC 6] gi|289565104|ref|ZP_06445557.1| thymidylate synthase [Enterococcus faecium D344SRF] gi|293556751|ref|ZP_06675314.1| thymidylate synthase [Enterococcus faecium E1039] gi|294614834|ref|ZP_06694729.1| thymidylate synthase [Enterococcus faecium E1636] gi|294617513|ref|ZP_06697144.1| thymidylate synthase [Enterococcus faecium E1679] gi|257820707|gb|EEV47855.1| thymidylate synthase [Enterococcus faecium 1,231,501] gi|260077975|gb|EEW65681.1| thymidylate synthase [Enterococcus faecium TC 6] gi|289163111|gb|EFD10958.1| thymidylate synthase [Enterococcus faecium D344SRF] gi|291592296|gb|EFF23910.1| thymidylate synthase [Enterococcus faecium E1636] gi|291596253|gb|EFF27515.1| thymidylate synthase [Enterococcus faecium E1679] gi|291601083|gb|EFF31372.1| thymidylate synthase [Enterococcus faecium E1039] Length = 315 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 150/315 (47%), Positives = 185/315 (58%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + EL Sbjct: 1 MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86 LWFL+GD+N+ YL ++ IWDEWA + Sbjct: 61 LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQ 120 Query: 87 -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 G+LG IYG QWR W DG IDQI ++++++ P SRR I Sbjct: 121 SKLFCEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLI 180 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A Sbjct: 181 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 240 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G GEF+HTLGD HLY NH EQ QLSR R P +++N + F ED L Sbjct: 241 HETGLAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQL 300 Query: 250 RSYEPHAAILAKVSV 264 Y+PH AI A ++V Sbjct: 301 EGYDPHPAIKAPIAV 315 >gi|257878008|ref|ZP_05657661.1| thymidylate synthase [Enterococcus faecium 1,230,933] gi|257881206|ref|ZP_05660859.1| thymidylate synthase [Enterococcus faecium 1,231,502] gi|257889793|ref|ZP_05669446.1| thymidylate synthase [Enterococcus faecium 1,231,410] gi|257892270|ref|ZP_05671923.1| thymidylate synthase [Enterococcus faecium 1,231,408] gi|258616504|ref|ZP_05714274.1| thymidylate synthase [Enterococcus faecium DO] gi|260559058|ref|ZP_05831244.1| thymidylate synthase [Enterococcus faecium C68] gi|293563409|ref|ZP_06677858.1| thymidylate synthase [Enterococcus faecium E1162] gi|293568067|ref|ZP_06679405.1| thymidylate synthase [Enterococcus faecium E1071] gi|294622290|ref|ZP_06701333.1| thymidylate synthase [Enterococcus faecium U0317] gi|257812236|gb|EEV40994.1| thymidylate synthase [Enterococcus faecium 1,230,933] gi|257816864|gb|EEV44192.1| thymidylate synthase [Enterococcus faecium 1,231,502] gi|257826153|gb|EEV52779.1| thymidylate synthase [Enterococcus faecium 1,231,410] gi|257828649|gb|EEV55256.1| thymidylate synthase [Enterococcus faecium 1,231,408] gi|260074815|gb|EEW63131.1| thymidylate synthase [Enterococcus faecium C68] gi|291589288|gb|EFF21098.1| thymidylate synthase [Enterococcus faecium E1071] gi|291598182|gb|EFF29280.1| thymidylate synthase [Enterococcus faecium U0317] gi|291604670|gb|EFF34155.1| thymidylate synthase [Enterococcus faecium E1162] Length = 315 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 150/315 (47%), Positives = 185/315 (58%), Gaps = 51/315 (16%) Query: 1 MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q YLDL R +++ G + DRTG GT S FGYQMRFDL KGFPLLTTK+V + + EL Sbjct: 1 MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86 LWFL+GD+N+ YL ++ IWDEWA + Sbjct: 61 LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQ 120 Query: 87 -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 G+LG IYG QWR W DG IDQI ++++++ P SRR I Sbjct: 121 SKLFCEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKQVIEAIKKTPDSRRLI 180 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH +FQFYV G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A Sbjct: 181 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 240 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G GEF+HTLGD HLY NH EQ QLSR R P +++N + F ED L Sbjct: 241 HETGLAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQL 300 Query: 250 RSYEPHAAILAKVSV 264 Y+PH AI A ++V Sbjct: 301 EGYDPHPAIKAPIAV 315 >gi|257453633|ref|ZP_05618923.1| thymidylate synthase [Enhydrobacter aerosaccus SK60] gi|257449091|gb|EEV24044.1| thymidylate synthase [Enhydrobacter aerosaccus SK60] Length = 286 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 150/279 (53%), Positives = 194/279 (69%), Gaps = 16/279 (5%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ V+ G + DRTG GT S FG QMRFDL +GFPLLTTKK+H KSV++ELLW Sbjct: 8 QAYLDLLKLVLDNGIQKGDRTGTGTISYFGAQMRFDLQEGFPLLTTKKIHTKSVIYELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA---------DKDGELGPIYGVQWRSWPDYDG------ 106 FL+GD++V YL +GV IW+EWA +GELG +YG QWR++ Sbjct: 68 FLKGDTHVQYLQDNGVRIWNEWATAEQTARFGKPEGELGAVYGHQWRNFGASKKADGSYH 127 Query: 107 -NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 + DQIS +V ++ +P SRR IVS WN +++ALPPCH LFQF+V +GKLSCQLYQ Sbjct: 128 SDGFDQISWVVNEIKNNPNSRRLIVSGWNPLEANEVALPPCHTLFQFFVADGKLSCQLYQ 187 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D+FLG+PFNIASY+LLT M+A V G GEF+ T GD H+YNNH +Q D QLSR P Sbjct: 188 RSADLFLGVPFNIASYALLTHMIAHVTGLGVGEFVWTGGDCHIYNNHLQQVDEQLSREPF 247 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP++ +NP+I D+ +F + D + +Y+ HA I A+VSV Sbjct: 248 ALPKLWLNPDITDIFAFDFNDIKIENYQSHATIKAEVSV 286 >gi|313123489|ref|YP_004033748.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280052|gb|ADQ60771.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684319|gb|EGD26489.1| thymidylate synthase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 318 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V + + ELLW Sbjct: 6 QAYLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQ 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W DG IDQI+ +++ ++ +P SRR IV+ Sbjct: 126 KFCQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHF Q + QL R+P P + +NP + F D L + Sbjct: 246 TGLEVGEFVHTIGDAHIYKNHFAQVEEQLKRTPFDAPTLWLNPEKKKVADFEMADIKLVN 305 Query: 252 YEPHAAILAKVSV 264 Y+ + I A V+V Sbjct: 306 YQHGSTIKAPVAV 318 >gi|16801054|ref|NP_471322.1| thymidylate synthase [Listeria innocua Clip11262] gi|22096226|sp|Q92AD4|TYSY_LISIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|16414489|emb|CAC97218.1| lin1988 [Listeria innocua Clip11262] Length = 314 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|224080379|ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa] gi|222849082|gb|EEE86629.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa] Length = 528 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 126/281 (44%), Positives = 172/281 (61%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL +++ +I G+ + DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 248 YLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFPLLTTKKVFWRGVVEELLWFI 307 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G ++ L G+ IWD A ++G+LGP+YG QWR + D Sbjct: 308 SGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGARYTDMHAD 367 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I+SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 368 YTGQGFDQLLDVIDKIKNNPNDRRIIISAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 427 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT ++A V G+F+H +GD H+Y+ H QL + Sbjct: 428 YQRSADMGLGVPFNIASYALLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQEQLRKL 487 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + IN D+ +F DF L Y+PH I K++V Sbjct: 488 PKPFPILKINSEKKDIDTFVAADFKLIGYDPHQKIEMKMAV 528 >gi|296473671|gb|DAA15786.1| thymidylate synthase [Bos taurus] Length = 354 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 130/320 (40%), Positives = 175/320 (54%), Gaps = 58/320 (18%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G R DRTG GT S FG Q R++L FPLLTTK+V WK V+ ELLWF Sbjct: 35 QYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRDEFPLLTTKRVFWKGVLEELLWF 94 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 95 IKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWRHFGAEYKDMDS 154 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 155 EYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 214 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ--- 219 LYQRSGD+ LG+PFNIASY+LLT M+A + + G+F+HTLGD H+Y NH E Q Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQALM 274 Query: 220 -----------------------------------LSRSPRTLPQMIINPNIVDLLSFRY 244 L R PR P++ I + + F+ Sbjct: 275 ELRGQSSRSLDGDGQAGTSRWAPVATDTERDRCCELQREPRPFPKLKILRKVETIDDFQA 334 Query: 245 EDFTLRSYEPHAAILAKVSV 264 EDF + Y PH I +++V Sbjct: 335 EDFQIEGYNPHPTIKMEMAV 354 >gi|328751979|gb|EGF65595.1| thymidylate synthase [Propionibacterium acnes HL025PA2] Length = 269 Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats. Identities = 158/270 (58%), Positives = 199/270 (73%), Gaps = 7/270 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR ++ G R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV ELL Sbjct: 1 MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L+ + + IWDEWAD++G+LGP+YG QWRSWPD DG IDQI+++V+ +R Sbjct: 61 WFLRGDTNVGWLYDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVEQIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174 +P+SRRHIVSAWNVA I +MALPPCH LFQFYV LSCQLYQRSGD FLG+ Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT ++ASV G + F+HTLGD H+Y NH +Q QL R PR P + +NP Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I D+ F D TL Y+P+ A+ A ++V Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269 >gi|269219953|ref|ZP_06163807.1| thymidylate synthase [Actinomyces sp. oral taxon 848 str. F0332] gi|269210693|gb|EEZ77033.1| thymidylate synthase [Actinomyces sp. oral taxon 848 str. F0332] Length = 267 Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats. Identities = 139/262 (53%), Positives = 179/262 (68%), Gaps = 2/262 (0%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DLL V++ G+++ DRTG GT S FG Q+R+ L++GFP +TTK V K+V ELLWFL Sbjct: 7 YEDLLADVLENGAEKGDRTGTGTLSVFGRQIRYRLAEGFPRITTKFVAMKAVKGELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 GD+NV +L G++IWDEWAD GELGP+YG QWRSWP DG IDQI ++ LRA P Sbjct: 67 SGDTNVRWLQERGITIWDEWADDAGELGPVYGYQWRSWPTPDGRHIDQIEQVLGELRAHP 126 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWN A +DKMAL PCH +FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L Sbjct: 127 DSRRLVVSAWNPADLDKMALQPCHAMFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A G G+F+ T GD H+Y NH +Q QL+R P P + + + + Sbjct: 187 LTHMMAQQAGLDVGDFVWTGGDCHIYLNHVKQVKEQLTREPYPFPTLRL-RKAPSIFEYA 245 Query: 244 YEDFTL-RSYEPHAAILAKVSV 264 +D + Y H + A V+V Sbjct: 246 MDDIDASQGYRHHPKLHAPVAV 267 >gi|300812535|ref|ZP_07092956.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496492|gb|EFK31593.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 318 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 183/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V + + ELLW Sbjct: 6 QAYLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQ 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W DG IDQI+ +++ ++ +P SRR IV+ Sbjct: 126 KFCQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHF Q + QL R P P + +NP + F D L + Sbjct: 246 TGLEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPEKKKVADFEMADIKLVN 305 Query: 252 YEPHAAILAKVSV 264 Y+ + I A V+V Sbjct: 306 YQHGSTIKAPVAV 318 >gi|328957378|ref|YP_004374764.1| thymidylate synthase [Carnobacterium sp. 17-4] gi|328673702|gb|AEB29748.1| thymidylate synthase [Carnobacterium sp. 17-4] Length = 316 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 143/312 (45%), Positives = 187/312 (59%), Gaps = 50/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL+L + V++ G + DRTG GT+S FGYQMR+DL KGFPLLTTK+V + + ELLWF Sbjct: 5 EYLNLGKKVLEDGHVKTDRTGTGTKSLFGYQMRYDLQKGFPLLTTKRVPFGLIKSELLWF 64 Query: 63 LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84 ++G++N+ YL +H IWDEWA Sbjct: 65 IKGNTNIRYLLQHNNHIWDEWAFERFVKSEEYVGPDMTDFGRRALVDEEFKAVYDVEKEA 124 Query: 85 ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 K GELG +YG QWR W G IDQ+ ++Q ++ P SRR +VSA Sbjct: 125 FCTRILEDDAFAAKYGELGNVYGAQWRRWKTTQGETIDQLKDVIQQIKTTPDSRRMLVSA 184 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A + Sbjct: 185 WNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAHEV 244 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEF+HTLGD HLY+NHFEQ QL+R PR P + +N + + F ED + Y Sbjct: 245 GLEVGEFVHTLGDAHLYSNHFEQMKKQLAREPRDFPTIALNESKNSIFDFEMEDIQIEGY 304 Query: 253 EPHAAILAKVSV 264 +PH I A ++V Sbjct: 305 DPHPGIKAPIAV 316 >gi|125984772|ref|XP_001356150.1| GA16493 [Drosophila pseudoobscura pseudoobscura] gi|54644469|gb|EAL33210.1| GA16493 [Drosophila pseudoobscura pseudoobscura] Length = 330 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 135/285 (47%), Positives = 181/285 (63%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLD ++++I G R DRT VGT S FG Q+RFD+ FPLLTTK+V +++VV EL+W Sbjct: 46 QQYLDFIQYIIGNGERRIDRTNVGTLSVFGSQLRFDMRLSFPLLTTKRVFFRAVVEELIW 105 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 106 FVGGKTDAKLLQAKNVHIWDGNSTREYLDKLGHTDRAVGDLGPVYGFQWRHFGAEYGTCD 165 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159 DY G IDQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QFYV G+L Sbjct: 166 DDYSGKGIDQLRQVIDTIRHNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGEL 225 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+FIHT+GD H+Y NH + Q Sbjct: 226 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKTGDFIHTMGDAHVYLNHVDPLKEQ 285 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R PR P++ I + ++ FRYEDF + YEP+ I ++V Sbjct: 286 LKRKPRPFPKLNIKRQVENIEDFRYEDFEIIGYEPYPKIKMDMAV 330 >gi|170051025|ref|XP_001861577.1| thymidylate synthase [Culex quinquefasciatus] gi|167872454|gb|EDS35837.1| thymidylate synthase [Culex quinquefasciatus] Length = 310 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 180/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61 QYL+L R +I G+ R DRTGVGT S FG QMR++L PLLTTK+V ++ V ELLW Sbjct: 28 QYLELTRRIIAKGNKRLDRTGVGTLSIFGSQMRYNLRNNTLPLLTTKRVFFRGVAEELLW 87 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+RG +N L + + IWD + ++G+LGP+YG QWR + Sbjct: 88 FIRGRTNAKDLQQKNIHIWDGNSTREFLDSAGFTDREEGDLGPVYGFQWRHFGAKYKTCD 147 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G IDQ++ ++ ++ +P RR I+SAWN I +MALPPCHCL QF+V +G+LSC Sbjct: 148 DDYTGEGIDQLAEVINRIKTNPTDRRIIMSAWNPVDIPQMALPPCHCLAQFFVSDGELSC 207 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASY+LLT M+A V G Q G+F+HT GD H+Y NH E QL Sbjct: 208 QLYQRSADMGLGVPFNIASYALLTHMIAHVTGLQPGDFVHTTGDTHVYLNHVEPLQAQLM 267 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + + + F++EDF +R Y+P+ I +++V Sbjct: 268 RKPKPFPTLHFKRVVQSIDDFQFEDFDVRGYDPYPTIKMQMAV 310 >gi|46908107|ref|YP_014496.1| thymidylate synthase [Listeria monocytogenes serotype 4b str. F2365] gi|47093257|ref|ZP_00231029.1| thymidylate synthase [Listeria monocytogenes str. 4b H7858] gi|254826083|ref|ZP_05231084.1| thymidylate synthase [Listeria monocytogenes FSL J1-194] gi|254852778|ref|ZP_05242126.1| thymidylate synthase [Listeria monocytogenes FSL R2-503] gi|254931955|ref|ZP_05265314.1| thymidylate synthase [Listeria monocytogenes HPB2262] gi|254992225|ref|ZP_05274415.1| thymidylate synthase [Listeria monocytogenes FSL J2-064] gi|255521581|ref|ZP_05388818.1| thymidylate synthase [Listeria monocytogenes FSL J1-175] gi|300763815|ref|ZP_07073812.1| thymidylate synthase [Listeria monocytogenes FSL N1-017] gi|62901328|sp|Q71YE1|TYSY_LISMF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|46881377|gb|AAT04673.1| thymidylate synthase [Listeria monocytogenes serotype 4b str. F2365] gi|47018389|gb|EAL09150.1| thymidylate synthase [Listeria monocytogenes str. 4b H7858] gi|258606105|gb|EEW18713.1| thymidylate synthase [Listeria monocytogenes FSL R2-503] gi|293583507|gb|EFF95539.1| thymidylate synthase [Listeria monocytogenes HPB2262] gi|293595324|gb|EFG03085.1| thymidylate synthase [Listeria monocytogenes FSL J1-194] gi|300515551|gb|EFK42601.1| thymidylate synthase [Listeria monocytogenes FSL N1-017] gi|328466226|gb|EGF37383.1| thymidylate synthase [Listeria monocytogenes 1816] gi|328473593|gb|EGF44430.1| thymidylate synthase [Listeria monocytogenes 220] Length = 314 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|330967045|gb|EGH67305.1| thymidylate synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 277 Score = 351 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 137/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V++ G+ + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+ Sbjct: 1 MKSYLDLLGDVLENGAQKGDRTGTGTISVFGRQFRHDLSKGFPLLTTKKLHFKSIVNELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV +L+ +GV IW+EWA ++G+LGP+YG QW +WP DG I+QI +V +L+ Sbjct: 61 WFLGGDTNVKWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + KMALPPCH L+QFYV + KLS L+ RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENARQGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+P+N AS + LT MLA GE + +L DVH+Y+NH EQ QL+R PR L Sbjct: 181 SDTFLGLPYNTASLACLTHMLAQQCDLDVGEIVISLSDVHIYSNHMEQVKTQLTREPRQL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ + + +++EDF + Y+PH I A VS+ Sbjct: 241 PELKLLRKPASIYDYKFEDFEVVGYDPHPHIAAPVSI 277 >gi|313623197|gb|EFR93452.1| thymidylate synthase [Listeria innocua FSL J1-023] Length = 314 Score = 351 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|332312316|gb|EGJ25411.1| Thymidylate synthase [Listeria monocytogenes str. Scott A] Length = 317 Score = 351 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 4 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 64 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 123 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 124 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 183 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 243 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 244 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 303 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 304 GYNPDPAIKAPISV 317 >gi|118349035|ref|XP_001033394.1| bifunctional dihydrofolate reductase-thymidylate synthase [Tetrahymena thermophila] gi|89287743|gb|EAR85731.1| bifunctional dihydrofolate reductase-thymidylate synthase [Tetrahymena thermophila SB210] Length = 485 Score = 351 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 136/285 (47%), Positives = 179/285 (62%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+L+ +IK G + DRTG GT S FG MRFDLSK FPLLTTK V W+ VV EL+W Sbjct: 201 YQYLELIDEIIKNGHVKTDRTGTGTISQFGKLMRFDLSKSFPLLTTKNVFWRGVVEELIW 260 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F++G +N L GV IWD ++G+LGP+YG QWR + Sbjct: 261 FIKGSTNSKILSEKGVKIWDGNGSREFLDQLGFKNREEGDLGPVYGFQWRHFGAEYKDMH 320 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y G +DQ+ ++ +++ +P SRR I++AWNV + MALPPCH + QFYV++ KLSC Sbjct: 321 TNYKGKGVDQLQDLINTIKKNPDSRRMIMNAWNVKDLPLMALPPCHVMSQFYVNDNKLSC 380 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LGIPFNIASY+LLT M+A V Q GEFIH LGD H+Y+NH +Q +QL Sbjct: 381 MMYQRSCDMGLGIPFNIASYALLTHMIAQVTNMQVGEFIHVLGDAHVYSNHVDQLKIQLE 440 Query: 222 RSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+P P + IN N + F EDF L Y H I K++V Sbjct: 441 RAPYPFPLLKINNNKQYNSIEDFTLEDFELIGYNYHPKIQMKMAV 485 >gi|326774199|ref|ZP_08233481.1| thymidylate synthase [Actinomyces viscosus C505] gi|326636338|gb|EGE37242.1| thymidylate synthase [Actinomyces viscosus C505] Length = 275 Score = 351 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 139/264 (52%), Positives = 177/264 (67%), Gaps = 4/264 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL V+ G+ + DRTG GTRS F Q+R+DL +GFP +TTK V K+V ELLWFL Sbjct: 13 YENLLAEVLTNGTAKSDRTGTGTRSLFARQLRYDLRRGFPRITTKFVAMKAVKGELLWFL 72 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RG++NV +L G++IWDEWAD GELGP+YG QWRSWP DG IDQI+ ++ +LR DP Sbjct: 73 RGETNVRWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGAIDQITGLIDTLRTDP 132 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + MAL PCH FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L Sbjct: 133 DSRRMLVSAWNVSELGSMALAPCHAFFQCYVADGRLSLQIYQRSADLFLGVPFNIASYAL 192 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDLLS 241 L MLA + GE I T GD H+Y+NH EQ QLSR P P + + + S Sbjct: 193 LAHMLAQQTDLEPGELIWTGGDCHIYDNHIEQVRTQLSRVPNAHPFPTLRLERA-ESIDS 251 Query: 242 FRYEDFTL-RSYEPHAAILAKVSV 264 + +D + YE H I A V+V Sbjct: 252 YDMDDIDASQGYEHHPTIKAPVAV 275 >gi|329945997|ref|ZP_08293684.1| thymidylate synthase [Actinomyces sp. oral taxon 170 str. F0386] gi|328528445|gb|EGF55423.1| thymidylate synthase [Actinomyces sp. oral taxon 170 str. F0386] Length = 296 Score = 351 bits (902), Expect = 5e-95, Method: Composition-based stats. Identities = 140/264 (53%), Positives = 178/264 (67%), Gaps = 4/264 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL V+ G+ + DRTG GT S F Q+R+DL++GFP +TTK V K+V ELLWFL Sbjct: 34 YENLLADVLTNGALKSDRTGTGTHSLFARQLRYDLARGFPRITTKFVAMKAVKGELLWFL 93 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+NV +L G++IWDEWAD GELGP+YG QWRSWP DG IDQI+ ++ +LR DP Sbjct: 94 RGDTNVRWLQERGITIWDEWADNAGELGPVYGSQWRSWPTCDGGAIDQIAGLINTLRTDP 153 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + MAL PCH FQ Y +G+LS Q+YQRS D+FLG+PFNIASY+L Sbjct: 154 DSRRMLVSAWNVSDLSSMALAPCHAFFQCYAADGRLSLQIYQRSADLFLGVPFNIASYAL 213 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDLLS 241 LT MLA G GE + T GD H+YNNH EQ QLSR P P + + + + Sbjct: 214 LTHMLAQQAGLDPGELVWTGGDCHIYNNHVEQVRTQLSRVPSAYPFPTLRLERA-ASIDA 272 Query: 242 FRYEDFTL-RSYEPHAAILAKVSV 264 + +D + YE H AI A V+V Sbjct: 273 YDMDDIDASQGYEHHPAIKAPVAV 296 >gi|304385033|ref|ZP_07367379.1| thymidylate synthase [Pediococcus acidilactici DSM 20284] gi|304329227|gb|EFL96447.1| thymidylate synthase [Pediococcus acidilactici DSM 20284] Length = 323 Score = 351 bits (902), Expect = 5e-95, Method: Composition-based stats. Identities = 144/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R+V++ G + DRT GT STFGYQMRFDLS+GFPLLTTK+V + + EL+W Sbjct: 11 EQYLNLERYVLENGHQKSDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELMW 70 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL+GD+N+ YL +H IWDEWA Sbjct: 71 FLKGDTNIRYLLQHKNHIWDEWAFKKWVESAEYDGPDMTNFGHRSLIDSDFNAQYQVQKD 130 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G IDQI +++ ++ P SRR IV+ Sbjct: 131 RFTKLILEDDAFAAKYGDLGNVYGSQWRAWKTSTGETIDQIENVIDLIKNHPDSRRMIVT 190 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLT M+A Sbjct: 191 AWNPEDVPTAALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGVPFNIASYALLTAMIAKT 250 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y+NH Q QL+R PR P++ N ++ + D + Sbjct: 251 CGLEVGEFVHTLGDAHIYSNHIAQVKEQLTRDPRPAPRLKFNQVHENIFDYEPADIVVEG 310 Query: 252 YEPHAAILAKVSV 264 Y+PH AI A V+V Sbjct: 311 YDPHPAIKAPVAV 323 >gi|260583621|ref|ZP_05851369.1| thymidylate synthase [Granulicatella elegans ATCC 700633] gi|260158247|gb|EEW93315.1| thymidylate synthase [Granulicatella elegans ATCC 700633] Length = 314 Score = 351 bits (902), Expect = 5e-95, Method: Composition-based stats. Identities = 149/314 (47%), Positives = 188/314 (59%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL + + G ++ DRTG GT+S FGYQMRFDL+KGFP+LTTK+V + + ELL Sbjct: 1 MKQYLELLEKIKQEGIEKSDRTGTGTKSIFGYQMRFDLTKGFPILTTKRVPFGLIKSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WF++GD+N+ YL +H IWDEWA Sbjct: 61 WFIKGDTNIRYLLQHNNHIWDEWAFKRYVESPDYTGEDMTDFGRRSLQDPVFKEVYEKEL 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ L+ P SRR +V Sbjct: 121 ETFCQRILNEDDFAAKYGELGNIYGSQWRHWKTTQGETIDQLAQVIEMLKTSPDSRRLLV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A+ Sbjct: 181 SAWNPEDVPSMALPPCHTMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAN 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + GEF+HTLGD HLY NH EQ DLQLSR P LPQ+++ L D L Sbjct: 241 EVGLEVGEFVHTLGDAHLYLNHLEQVDLQLSREPFELPQLVLKHPEKSLYDLEVADVVLE 300 Query: 251 SYEPHAAILAKVSV 264 YE H I A ++V Sbjct: 301 GYECHPTIKAPIAV 314 >gi|226224478|ref|YP_002758585.1| thymidylate synthase [Listeria monocytogenes Clip81459] gi|259550791|sp|C1KWH4|TYSY_LISMC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|225876940|emb|CAS05649.1| Putative thymidylate synthase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 314 Score = 351 bits (902), Expect = 5e-95, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPKDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|323339894|ref|ZP_08080163.1| thymidylate synthase [Lactobacillus ruminis ATCC 25644] gi|323092767|gb|EFZ35370.1| thymidylate synthase [Lactobacillus ruminis ATCC 25644] Length = 319 Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats. Identities = 147/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+R ++ G + DRT GT S FGYQMRFDL KGFPLLTTKKV + ELLWFL Sbjct: 9 YLQLIRDILDHGHRKDDRTKTGTISLFGYQMRFDLGKGFPLLTTKKVPLGLIKSELLWFL 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 GD+N+ YL +H IWDEWA Sbjct: 69 NGDTNIQYLLKHKNHIWDEWAFKKWVESDEYEGPDMTDFGLRCQKDPEFDKVYREQMKLF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W +G IDQI ++++ ++ +P SRR IV+AW Sbjct: 129 CDRMVNDDEFAKKYGDLGNVYGAQWRHWKTSNGETIDQIKNVIEEIKTNPDSRRLIVTAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV+NGKLSCQLYQRSGDVFLG+PFNIASYSLLT ++A G Sbjct: 189 NPEDVPTSALPPCHSLFQFYVNNGKLSCQLYQRSGDVFLGVPFNIASYSLLTHLIARECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HTLGD H+Y+NH EQ QL R+P+ P + +NP L F +D + Y+ Sbjct: 249 LEVGEFVHTLGDAHIYSNHIEQVKEQLKRTPKKAPTLWLNPEKKHLEDFDVDDIKVIDYD 308 Query: 254 PHAAILAKVSV 264 P AI A V+V Sbjct: 309 PAPAIKAPVAV 319 >gi|254831525|ref|ZP_05236180.1| thymidylate synthase [Listeria monocytogenes 10403S] Length = 314 Score = 351 bits (901), Expect = 6e-95, Method: Composition-based stats. Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P +I A +SV Sbjct: 301 GYNPDPSIKAPISV 314 >gi|217963973|ref|YP_002349651.1| thymidylate synthase [Listeria monocytogenes HCC23] gi|254790241|sp|B8DDM8|TYSY_LISMH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|217333243|gb|ACK39037.1| thymidylate synthase [Listeria monocytogenes HCC23] gi|307571457|emb|CAR84636.1| thyA [Listeria monocytogenes L99] Length = 314 Score = 351 bits (901), Expect = 6e-95, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|156551994|ref|XP_001603103.1| PREDICTED: similar to Tyms protein [Nasonia vitripennis] Length = 316 Score = 351 bits (901), Expect = 6e-95, Method: Composition-based stats. Identities = 133/282 (47%), Positives = 177/282 (62%), Gaps = 21/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61 QYL L+R ++ G+ + DRTGVGT S FG QMRF L G PLLTTK+V W++V EL W Sbjct: 34 QYLKLIRLILDKGAVKDDRTGVGTHSVFGTQMRFSLRDGTLPLLTTKRVFWRAVAEELFW 93 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+RG +N L GV IWD A ++G+LGP+YG QWR + Sbjct: 94 FIRGSTNAKELSAKGVKIWDANASREFLDTCGFQDREEGDLGPVYGFQWRHFGAKYVDMH 153 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ++ ++ ++ +P RR I+SAWN I KMALPPCH L QFYV +G+LSC Sbjct: 154 TDYSGQGFDQLADVIDKVKNNPDDRRIIMSAWNPVDIPKMALPPCHSLAQFYVYDGELSC 213 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQR+GD+ LG+PFNIASYSLLT+M+A V + GEF+HT+GD H+Y NH + Q+ Sbjct: 214 HLYQRAGDMGLGVPFNIASYSLLTIMIAHVANLKPGEFVHTMGDTHVYRNHVDAVKEQIK 273 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R PR P++ I + D+ F++ DF L Y PH I ++ Sbjct: 274 REPRPFPKLRIKRQVTDIDDFQFSDFELEGYNPHPKIDMSMA 315 >gi|161870554|ref|YP_001599726.1| thymidylate synthase [Neisseria meningitidis 053442] gi|161596107|gb|ABX73767.1| thymidylate synthase [Neisseria meningitidis 053442] Length = 231 Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats. Identities = 155/231 (67%), Positives = 189/231 (81%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 MRFDL KGFPLLTTKK+H +S++HELLWFL+GD+N+ YL + VSIWDEWAD++G+LGP+ Sbjct: 1 MRFDLGKGFPLLTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPV 60 Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG QWR+WP DG IDQI+++++ ++ +P SRR IVSAWN AL+D+MALPPCH LFQFY Sbjct: 61 YGYQWRNWPAPDGRHIDQIANVLEQIKKNPDSRRLIVSAWNPALVDEMALPPCHTLFQFY 120 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V +GKLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G + GEF+HT GD HLY NHF Sbjct: 121 VADGKLSCQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHF 180 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 EQA LQL R PR LP M INP + DL SF++EDF L Y+PH I A VSV Sbjct: 181 EQAALQLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV 231 >gi|317125309|ref|YP_004099421.1| thymidylate synthase [Intrasporangium calvum DSM 43043] gi|315589397|gb|ADU48694.1| thymidylate synthase [Intrasporangium calvum DSM 43043] Length = 271 Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats. Identities = 157/271 (57%), Positives = 198/271 (73%), Gaps = 7/271 (2%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV+ G ++ DRTG GT S FG+QMRFDL+ GFP +TTK++H +S++ ELL Sbjct: 1 MRQYLDLLDHVLTHGQEKSDRTGTGTLSVFGHQMRFDLADGFPAMTTKRLHLRSIIGELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+NV +L G++IWDEWAD G+LGPIYG QWRSWP DG +DQI+ +++ +R Sbjct: 61 WFLRGDTNVRWLQERGITIWDEWADAKGDLGPIYGYQWRSWPTPDGRRVDQIARVIEQIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLG 173 +P SRRHIVSAWNVA +D MALPPCH +FQFYV +LSCQLYQRS D+FLG Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHTMFQFYVHPATESGGPRRLSCQLYQRSADIFLG 180 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 +PFNIASY+LLT M+A + + GEF+HTLGD HLY NH +QA LQL+R+P LP M I Sbjct: 181 VPFNIASYALLTQMIAQLTDLEPGEFVHTLGDAHLYLNHLDQARLQLTRTPHPLPTMRIT 240 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P D+ +F +DF L Y I A ++V Sbjct: 241 PGKKDIDAFDIDDFVLEDYVADPGIKAPIAV 271 >gi|315282890|ref|ZP_07871198.1| thymidylate synthase [Listeria marthii FSL S4-120] gi|313613464|gb|EFR87300.1| thymidylate synthase [Listeria marthii FSL S4-120] Length = 314 Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAESDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 AQFKKRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|116873310|ref|YP_850091.1| thymidylate synthase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123463950|sp|A0AJY0|TYSY_LISW6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116742188|emb|CAK21312.1| thymidylate synthase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 314 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EQFKTRILEDEGFANKYGELGNIYGKQWREWKTSQGETIDQLADVIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPTTIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYHPDPAIKAPISV 314 >gi|284802320|ref|YP_003414185.1| thymidylate synthase [Listeria monocytogenes 08-5578] gi|284995462|ref|YP_003417230.1| thymidylate synthase [Listeria monocytogenes 08-5923] gi|284057882|gb|ADB68823.1| thymidylate synthase [Listeria monocytogenes 08-5578] gi|284060929|gb|ADB71868.1| thymidylate synthase [Listeria monocytogenes 08-5923] Length = 314 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRVERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P +I A +SV Sbjct: 301 GYNPDPSIKAPISV 314 >gi|47096916|ref|ZP_00234494.1| thymidylate synthase [Listeria monocytogenes str. 1/2a F6854] gi|224500227|ref|ZP_03668576.1| thymidylate synthase [Listeria monocytogenes Finland 1988] gi|254827241|ref|ZP_05231928.1| thymidylate synthase [Listeria monocytogenes FSL N3-165] gi|254899429|ref|ZP_05259353.1| thymidylate synthase [Listeria monocytogenes J0161] gi|254912432|ref|ZP_05262444.1| thymidylate synthase [Listeria monocytogenes J2818] gi|254936759|ref|ZP_05268456.1| thymidylate synthase [Listeria monocytogenes F6900] gi|47014729|gb|EAL05684.1| thymidylate synthase [Listeria monocytogenes str. 1/2a F6854] gi|258599624|gb|EEW12949.1| thymidylate synthase [Listeria monocytogenes FSL N3-165] gi|258609355|gb|EEW21963.1| thymidylate synthase [Listeria monocytogenes F6900] gi|293590413|gb|EFF98747.1| thymidylate synthase [Listeria monocytogenes J2818] Length = 314 Score = 351 bits (900), Expect = 8e-95, Method: Composition-based stats. Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRIIEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P +I A +SV Sbjct: 301 GYNPDPSIKAPISV 314 >gi|104773868|ref|YP_618848.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513875|ref|YP_812781.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275355|sp|Q04B29|TYSY_LACDB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123077296|sp|Q1GAP2|TYSY_LACDA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|103422949|emb|CAI97614.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093190|gb|ABJ58343.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125534|gb|ADY84864.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 318 Score = 350 bits (899), Expect = 9e-95, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 183/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V + + ELLW Sbjct: 6 QAYLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQ 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W DG IDQI+ +++ ++ +P SRR IV+ Sbjct: 126 KFCQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT+GD H+Y NHF Q + QL R P P + +NP + F D L + Sbjct: 246 TGLEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPGKKKVADFEMADIKLVN 305 Query: 252 YEPHAAILAKVSV 264 Y+ + I A V+V Sbjct: 306 YQHGSTIKAPVAV 318 >gi|224004314|ref|XP_002295808.1| possible thymidylate synthase [Thalassiosira pseudonana CCMP1335] gi|209585840|gb|ACI64525.1| possible thymidylate synthase [Thalassiosira pseudonana CCMP1335] Length = 516 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 123/287 (42%), Positives = 173/287 (60%), Gaps = 25/287 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61 QYL++ R +I+ G R DRTG GT S FG QMR+ L PLLTTK+ W+ V ELLW Sbjct: 230 QYLEICRDIIENGVRRGDRTGTGTLSKFGVQMRYSLRDNTLPLLTTKRTFWRGVAEELLW 289 Query: 62 FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------- 102 F++G +N + L + IWD ++G+LGP+YG QWR + Sbjct: 290 FVKGSTNANELADKNIHIWDGNGSREFLDSRGLQHREEGDLGPVYGFQWRHFGAEYKDMH 349 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--L 159 DY G +DQ++ + + +P RR ++SAWN +D MALPPCH QFYVD + + Sbjct: 350 ADYTGQGVDQLADCIDKIINNPEDRRIVMSAWNPKDLDVMALPPCHMFCQFYVDTDRNEV 409 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQ+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH + Q Sbjct: 410 SCQMYQRSADMGLGVPFNIASYALLTHMIAKVTGRKAGDFVHTIGDAHVYLNHVDALKEQ 469 Query: 220 LSRSPRTLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R PR P++ + + D+ F ++DF + Y+PH I K++V Sbjct: 470 LERKPRAFPKLKMKDGKDFNDIDGFEFDDFEVVGYKPHKTIKMKMAV 516 >gi|320163301|gb|EFW40200.1| thymidylate synthase [Capsaspora owczarzaki ATCC 30864] Length = 337 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 131/284 (46%), Positives = 179/284 (63%), Gaps = 22/284 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL+R +I+ G +R DRTG GTRS FG QMRF L G PLLTTK+V W+ V ELLW Sbjct: 54 QYLDLIRAIIENGDERLDRTGTGTRSIFGAQMRFSLRDGVMPLLTTKRVFWRGVAEELLW 113 Query: 62 FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------- 102 F+ G++N + L + IWD ++G+LGP+YG QWR + Sbjct: 114 FVAGNTNATALSDKDIHIWDANGSRAFLDGRGLQHREEGDLGPVYGFQWRHFGAPYTTMH 173 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LS 160 DY+G +DQ+ ++++++ +P RR I+SAWN I MALPPCH + QF+V + K LS Sbjct: 174 ADYEGKGVDQLKHVIETIKTNPNDRRLIISAWNPVDIPNMALPPCHMMCQFHVSSKKELS 233 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C +YQRS D+ LG+PFNIASY+LLT+M+A V G GE +HT+GD H+Y NH + QL Sbjct: 234 CLMYQRSADMGLGVPFNIASYALLTIMVAEVTGLTPGELVHTIGDAHVYLNHIDPLKEQL 293 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P +N + ++ FR+EDF + Y PHA I ++V Sbjct: 294 KREPRPFPTFKLNRKVTEIDDFRFEDFVITGYNPHAKIEMDMAV 337 >gi|255543751|ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Ricinus communis] gi|223547949|gb|EEF49441.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Ricinus communis] Length = 528 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 130/281 (46%), Positives = 170/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L++ +I G + DRTG GT S FG Q+RF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 248 YLRLVQEIISDGILKDDRTGTGTLSKFGCQVRFNLRKTFPLLTTKKVFWRGVVEELLWFI 307 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103 G +N L G+ IWD A +D G+LGP+YG QWR + D Sbjct: 308 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKNREEGDLGPVYGFQWRHFGARYTDMHAD 367 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ +V ++ +P RR I+SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 368 YTGQGFDQLLDVVNKIKNNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 427 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY LLT ++A V G+F+H +GD H+Y H QL + Sbjct: 428 YQRSADMGLGVPFNIASYGLLTCIIAHVCDLVPGDFVHVIGDTHVYRTHVRPLQEQLQKL 487 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP ++ SF DF L Y+PH I K++V Sbjct: 488 PKPFPILKINPEKKNIDSFVAADFKLIGYDPHHKIEMKMAV 528 >gi|16803914|ref|NP_465399.1| thymidylate synthase [Listeria monocytogenes EGD-e] gi|224501326|ref|ZP_03669633.1| thymidylate synthase [Listeria monocytogenes FSL R2-561] gi|22096224|sp|Q8Y626|TYSY_LISMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|16411328|emb|CAC99952.1| lmo1874 [Listeria monocytogenes EGD-e] Length = 314 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 151/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRIIEDEAFATKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P +I A +SV Sbjct: 301 GYNPDPSIKAPISV 314 >gi|332638740|ref|ZP_08417603.1| thymidylate synthase [Weissella cibaria KACC 11862] Length = 318 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 140/313 (44%), Positives = 184/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V++ G + DRTG GTRS FG QMRFD+++GFPLLTTK+V + + ELLW Sbjct: 6 QAYLDLAQEVLETGHAKGDRTGTGTRSLFGRQMRFDMAEGFPLLTTKRVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FL+G++N+ +L H IWDEWA K+ Sbjct: 66 FLQGNTNIRFLLEHNNHIWDEWAFKNWIESADYTGPDMTDFGRRSLVDEAFKAQYDEQHQ 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 GELG +YG QWR W G IDQI +V ++ +P SRR IV+ Sbjct: 126 LFVDRILADDAFAKQYGELGDVYGAQWRHWRKVQGGFIDQIDDVVNQIKTNPNSRRLIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV +GKLS QLYQRS D+FLG+PFNIASYSLL M+A+ Sbjct: 186 AWNPEDVPSQALPPCHTLFQFYVADGKLSLQLYQRSADIFLGVPFNIASYSLLLHMVAAQ 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y+NH Q QLSR LPQ+++NP++ + + +D + Sbjct: 246 TGLEAGEFVHTLGDAHIYSNHIAQVTEQLSREMVELPQLVLNPDVKSIFDYTMDDIKVEG 305 Query: 252 YEPHAAILAKVSV 264 Y+P +I A V+V Sbjct: 306 YKPAKSIKAPVAV 318 >gi|296422006|ref|XP_002840554.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636772|emb|CAZ84745.1| unnamed protein product [Tuber melanosporum] Length = 306 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 134/291 (46%), Positives = 184/291 (63%), Gaps = 28/291 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +QYLDL+R+++ G R DRTG GT S F Q+RF+L FPLLTTK++ K+++HEL Sbjct: 16 YQYLDLVRNILTNGEHRPDRTGTGTISLFAPPQLRFNLKNHTFPLLTTKRLFHKAILHEL 75 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP----- 102 LWF+ G ++ + L GV IW+ + +G+LGP+YG QWR + Sbjct: 76 LWFISGSTSNAPLSAVGVKIWEGNGSRAYLDSIGLTERAEGDLGPVYGFQWRHFGAKYVD 135 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ++ ++ L+ +PY RR I+SAWN A + KMALPPCH QFYV Sbjct: 136 CHTDYSGQGVDQLADVIYKLKNNPYDRRIIMSAWNPADLAKMALPPCHMFAQFYVSYKEG 195 Query: 156 --NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 G LSC LYQRS D+ LG+PFNIASY+LLT+M+A V G + GEFIHT+GD H+Y +H Sbjct: 196 KGMGALSCVLYQRSCDMGLGVPFNIASYALLTIMIAHVCGLEPGEFIHTMGDAHVYADHA 255 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + QL R+PR P + IN + D+ F++EDF L Y+PH +I +SV Sbjct: 256 DALKGQLERAPREFPTLKINRQVDDIDDFKFEDFELVGYDPHPSIKMNMSV 306 >gi|116333431|ref|YP_794958.1| thymidylate synthase [Lactobacillus brevis ATCC 367] gi|122269882|sp|Q03S95|TYSY_LACBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116098778|gb|ABJ63927.1| thymidylate synthase [Lactobacillus brevis ATCC 367] Length = 316 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 145/311 (46%), Positives = 192/311 (61%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + V+ G ++ DRTG GT S FGYQMRF+L +GFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLAKTVLTTGHEKTDRTGTGTISLFGYQMRFNLQEGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 66 RGDTNIRFLLQHHNHIWDEWAFQRYVDSPEYHGPDMTDFGRRSLVDADFNQRYQAEKKAF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 D G+LG +YG QWR+W + G IDQ+++++++LR P SRR IVSAW Sbjct: 126 CDRIVTDQAFGDHFGDLGLVYGSQWRAWQGHQGETIDQLANVIETLRTHPDSRRMIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N A + MALPPCH LFQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A +G Sbjct: 186 NPADVPSMALPPCHTLFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTSLIAKEVG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + G+F+HTLGD H+Y+NH EQ QL+R+P PQ+ +NP+ + + D + Y+ Sbjct: 246 LEVGDFVHTLGDAHIYSNHVEQIKTQLARTPHAAPQLWLNPDKSSIFDYEMSDIKVTGYD 305 Query: 254 PHAAILAKVSV 264 P AI A V+V Sbjct: 306 PEPAIKAPVAV 316 >gi|241854848|ref|XP_002415983.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] gi|215510197|gb|EEC19650.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes scapularis] Length = 287 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 135/284 (47%), Positives = 179/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+H+++ G + DRTGVGT FG Q R+ L G PLLTTK+V W+ VV ELL Sbjct: 4 YQYLKTLKHILENGKKKEDRTGVGTMLIFGVQCRYSLRNGTMPLLTTKRVFWRGVVEELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG ++ L G+ IWD+ ++G+LGP+YG QWR + Sbjct: 64 WFLRGSTDAKELSERGIHIWDQNGSRRFLDSLGFFDREEGDLGPVYGFQWRHFGATYRNS 123 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY +DQI+ +V+ ++ DP RR I+ +WN I KM LPPCHCL QFYVD+ +LS Sbjct: 124 HTDYGNEGVDQITRLVEIIKNDPNDRRMILCSWNPTDIKKMVLPPCHCLAQFYVDDDELS 183 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT M+A V G + GEF+H LGD H+Y NH E QL Sbjct: 184 CQLYQRSADMGLGVPFNIASYALLTHMMAKVTGKRPGEFVHNLGDAHIYLNHVESVKQQL 243 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I ++ D+ FR +DF L Y P+ I ++SV Sbjct: 244 EREPRPFPKLRIRRDVTDIFDFRCDDFELIDYNPYPKIKMEMSV 287 >gi|270291285|ref|ZP_06197507.1| thymidylate synthase [Pediococcus acidilactici 7_4] gi|270280131|gb|EFA25967.1| thymidylate synthase [Pediococcus acidilactici 7_4] Length = 316 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 143/313 (45%), Positives = 185/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R+V++ G + DRT GT STFGYQMRFDLS+GFPLLTTK+V + + EL+W Sbjct: 4 EQYLNLERYVLENGHQKSDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELMW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL+GD+N+ YL +H IWDEWA Sbjct: 64 FLKGDTNIRYLLQHKNHIWDEWAFKKWVESAEYDGPDMTNFGHRSLIDSDFNAQYQVQKD 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G IDQI +++ ++ P SRR IV+ Sbjct: 124 RFTKLILEDDAFAAKYGDLGNVYGSQWRAWKTSTGETIDQIENVIDLIKNHPDSRRMIVT 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLT M+A Sbjct: 184 AWNPEDVPTAALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGVPFNIASYALLTAMIAKT 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y+NH Q QL+R PR P++ N ++ + D + Sbjct: 244 CGLEVGEFVHTLGDAHIYSNHIAQVKEQLARDPRPAPRLKFNQVHENIFDYEPADIVVEG 303 Query: 252 YEPHAAILAKVSV 264 Y+PH I A V+V Sbjct: 304 YDPHPTIKAPVAV 316 >gi|320533091|ref|ZP_08033824.1| thymidylate synthase [Actinomyces sp. oral taxon 171 str. F0337] gi|320134706|gb|EFW26921.1| thymidylate synthase [Actinomyces sp. oral taxon 171 str. F0337] Length = 297 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 141/264 (53%), Positives = 177/264 (67%), Gaps = 4/264 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL V+ G+ + DRTG GTRS F Q+R+DL +GFP +TTK V K+V ELLWFL Sbjct: 35 YENLLADVLTNGTSKSDRTGTGTRSLFARQLRYDLGRGFPRITTKFVAMKAVKGELLWFL 94 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+NV +L G++IWDEWAD GELGP+YG QWRSWP DG VIDQIS ++ +LR DP Sbjct: 95 RGDTNVGWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGVIDQISGLIDTLRTDP 154 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + MAL PCH FQ Y G+LS Q+YQRS D+FLG+PFNIASY+L Sbjct: 155 DSRRMLVSAWNVSELGSMALAPCHAFFQCYAAEGRLSLQIYQRSADLFLGVPFNIASYAL 214 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDLLS 241 LT MLA + GE I T GD H+Y+NH EQ QLSR P P + + + + Sbjct: 215 LTHMLAQQADLEPGELIWTGGDCHIYDNHVEQVRTQLSRVPSAHPFPTLRLERA-ESIDA 273 Query: 242 FRYEDFTL-RSYEPHAAILAKVSV 264 + +D + YE H I A V+V Sbjct: 274 YDMDDIDASQGYEHHPTIKAPVAV 297 >gi|162447551|ref|YP_001620683.1| thymidylate synthase [Acholeplasma laidlawii PG-8A] gi|189036925|sp|A9NG27|TYSY_ACHLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|161985658|gb|ABX81307.1| thymidylate synthase [Acholeplasma laidlawii PG-8A] Length = 288 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 152/293 (51%), Positives = 196/293 (66%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL RH+++ G+ + DRTG GT+S FGYQM FDL GFPLLTTKK K ++HELL Sbjct: 1 MKQYLDLARHIMENGTLKSDRTGTGTKSIFGYQMFFDLKDGFPLLTTKKTFLKGIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIW-----------------------------DEWADKDGELG 91 WF++GD+N+ YL + V IW DE+A K G+LG Sbjct: 61 WFIKGDTNIKYLVDNNVGIWTDWPYKNYMNSSEYQGESIKEFSDKIRQSDEFAKKWGDLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ N +DQI I+ +L+ +P SRR ++SAWN A I +M LPPCH L Q Sbjct: 121 PVYGSQWRNF-----NGVDQIEYIINTLKTNPDSRRMVLSAWNPAEIGQMMLPPCHTLIQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV + KLS QLYQRSGDVFLGIPFNIASY++ MM+A V GF+ G F+HT+GD H+Y N Sbjct: 176 FYVVDNKLSLQLYQRSGDVFLGIPFNIASYAVFLMMVAQVTGFELGSFVHTIGDAHIYTN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 HF+Q +LQL+R+PR LP + IN +I L F+YEDF L Y+P+ I V+V Sbjct: 236 HFDQINLQLTRTPRRLPILKINKSITRLEDFKYEDFELVGYDPYPPIKGVVAV 288 >gi|148550243|ref|YP_001270345.1| thymidylate synthase [Pseudomonas putida F1] gi|166231726|sp|A5WAK1|TYSY_PSEP1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148514301|gb|ABQ81161.1| thymidylate synthase [Pseudomonas putida F1] Length = 277 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 138/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V++ GS + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+ Sbjct: 1 MKSYLDLLTDVLENGSVKGDRTGTGTISVFGRQYRHDLSKGFPLLTTKKLHFKSIVNELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ +L+ +GV IW+EWA ++G+LGP+YG QW +WP DG I+QI +V +L+ Sbjct: 61 WFLSGDTNIKWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + KMALPPCH L+QFYV + KLS L+ RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENAENGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+P+N AS + LT MLA GE + +L DVH+Y+NH EQ Q+SR PR L Sbjct: 181 SDSFLGLPYNTASLACLTHMLAQQCDMGVGEIVISLSDVHIYSNHMEQVKTQISREPRKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ + + +++EDF L Y+PH I A VS+ Sbjct: 241 PELKLLRKPESIYDYKFEDFELVGYDPHPHIAAPVSI 277 >gi|237746462|ref|ZP_04576942.1| thymidylate synthase,TS [Oxalobacter formigenes HOxBLS] gi|229377813|gb|EEO27904.1| thymidylate synthase,TS [Oxalobacter formigenes HOxBLS] Length = 277 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 144/276 (52%), Positives = 194/276 (70%), Gaps = 14/276 (5%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+LL+ +++ G+D+ DRTG GTR+ FG MR DL G PLLTTK++H +S++ ELLW Sbjct: 3 RQYLNLLKEILETGADKGDRTGTGTRAVFGRMMRHDLKNGLPLLTTKRLHIRSIICELLW 62 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G +NV YLH + V+IWDEWA + G+LGPIYG QWRSW DG DQ+++++ S+R Sbjct: 63 FLQGGTNVRYLHENKVTIWDEWATETGDLGPIYGAQWRSWEGSDGKRYDQVAAVIDSIRE 122 Query: 122 DPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +P SRRHI+SAWNVAL+ KMAL PCH ++QF V G+LSC + QRSG Sbjct: 123 NPDSRRHIISAWNVALLPSEKKSPQDNVKDGKMALAPCHVMYQFQVAAGRLSCMMTQRSG 182 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+FLGIP+N AS +LLT M+A G + GE IH++GD+HLY NHF+QA LQLSR PR LP Sbjct: 183 DIFLGIPYNTASTALLTHMIARQCGLEPGEVIHSIGDLHLYKNHFDQARLQLSREPRALP 242 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + + + +DF + Y+PH AI A ++V Sbjct: 243 GLKLKNKP-SIFDYTLDDFEITGYDPHPAIAAPIAV 277 >gi|283457486|ref|YP_003362064.1| thymidylate synthase [Rothia mucilaginosa DY-18] gi|283133479|dbj|BAI64244.1| thymidylate synthase [Rothia mucilaginosa DY-18] Length = 293 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 151/285 (52%), Positives = 190/285 (66%), Gaps = 24/285 (8%) Query: 4 YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 Y DLLR +++ D R DRTG GT FG QMRFDL + FPL+TTK+VH+KSV Sbjct: 9 YEDLLREILEENKDAIAADAQRSDRTGTGTFGVFGRQMRFDLRESFPLITTKRVHFKSVA 68 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 ELLWFLRG SNV +L GV+IWDEWAD++G+LGP+YGVQWRSWP DG IDQI+ ++ Sbjct: 69 IELLWFLRGSSNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 128 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVF 171 +SL+ +P SRRHIV+AWN A +D MALPPCH LFQFYV +LSCQLYQRS D+F Sbjct: 129 ESLKNNPSSRRHIVTAWNPAEVDSMALPPCHALFQFYVHERADGVKELSCQLYQRSADMF 188 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT----- 226 LG+PFNIASY+LLT ++A +G + GEFI T GD H+Y+NH EQ QL Sbjct: 189 LGVPFNIASYALLTYLIAQEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGTDPEGNPY 248 Query: 227 -------LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+++I + + YEDF L Y+ H I A ++V Sbjct: 249 PPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGIAAPIAV 293 >gi|326803555|ref|YP_004321373.1| thymidylate synthase [Aerococcus urinae ACS-120-V-Col10a] gi|326650675|gb|AEA00858.1| thymidylate synthase [Aerococcus urinae ACS-120-V-Col10a] Length = 313 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 155/314 (49%), Positives = 193/314 (61%), Gaps = 51/314 (16%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL+ +++ G D+ DRTGVGTRS FGYQMRFDL +GFP+LTTKKV + + ELL Sbjct: 1 MKQYLDLLQTILEKGHDKSDRTGVGTRSIFGYQMRFDLREGFPILTTKKVAFGLIKSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFLRGD+N+ YL + IWDEWA Sbjct: 61 WFLRGDTNIRYLLENNNHIWDEWAFENWVNSEDYQGPDMTNFGLRAEKDPEFKAEYLKVK 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG +YG QWR W DG IDQI++I++ LR +P SRR I+ Sbjct: 121 ADFCQKILNDEDFAKKYGELGNVYGKQWRDWETRDGGSIDQIANILEQLRNNPDSRRIIL 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH L QFYV++GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDVPNMALPPCHTLSQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G + G+F+HT GDVH+YNNHF+Q QLSR P LPQ+ I + + +D L Sbjct: 241 EVGLEVGDFVHTFGDVHIYNNHFDQVKEQLSRQPGQLPQLEIKSD-KSMFDLEKDDIVLN 299 Query: 251 SYEPHAAILAKVSV 264 +Y P I A V+V Sbjct: 300 NYHPQTPIKAPVAV 313 >gi|330899097|gb|EGH30516.1| thymidylate synthase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 277 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 136/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V++ G+ + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+ Sbjct: 1 MKSYLDLLGDVLENGAQKGDRTGTGTISVFGRQFRHDLSKGFPLLTTKKLHFKSIVNELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+NV +L+ +GV IW+EWA ++G+LGP+YG QW +WP DG I+QI +V +L+ Sbjct: 61 WFLGGDTNVRWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + KMALPPCH L+QFYV + KLS L+ RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENARQGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+P+N AS + LT MLA GE + +L DVH+Y+NH EQ Q++R PR L Sbjct: 181 SDTFLGLPYNTASLACLTHMLAQQCDLDVGEIVISLSDVHIYSNHMEQVKTQIAREPRQL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ + + +++EDF + Y+PH I A VS+ Sbjct: 241 PELKLLRKPASIYDYKFEDFEVVGYDPHPHIAAPVSI 277 >gi|255326790|ref|ZP_05367866.1| thymidylate synthase [Rothia mucilaginosa ATCC 25296] gi|255296007|gb|EET75348.1| thymidylate synthase [Rothia mucilaginosa ATCC 25296] Length = 293 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 151/285 (52%), Positives = 189/285 (66%), Gaps = 24/285 (8%) Query: 4 YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 Y DLLR +++ D R DRTG GT FG QMRFDL + FPL+TTK+VH+KSV Sbjct: 9 YEDLLREILEENKDAIAADAQRSDRTGTGTFGVFGRQMRFDLRESFPLITTKRVHFKSVA 68 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 ELLWFLRG SNV +L GV+IWDEWAD++G+LGP+YGVQWRSWP DG IDQI+ ++ Sbjct: 69 IELLWFLRGSSNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 128 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVF 171 SL+ +P SRRHIVSAWN A +D MALPPCH LFQFYV +LSCQLYQRS D+F Sbjct: 129 DSLKNNPGSRRHIVSAWNPAEVDNMALPPCHALFQFYVHERADGVKELSCQLYQRSADMF 188 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT----- 226 LG+PFNIASY+LLT ++A +G + GEF+ T GD H+Y+NH EQ QL Sbjct: 189 LGVPFNIASYALLTYLIAQEVGMEPGEFVWTGGDCHIYSNHLEQVKKQLGYGTDPEGNPY 248 Query: 227 -------LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+++I + + YEDF L Y+ H I A ++V Sbjct: 249 PPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGIAAPIAV 293 >gi|255027643|ref|ZP_05299629.1| thymidylate synthase [Listeria monocytogenes FSL J2-003] Length = 314 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRIIEDEAFATKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|195031079|ref|XP_001988286.1| GH10649 [Drosophila grimshawi] gi|193904286|gb|EDW03153.1| GH10649 [Drosophila grimshawi] Length = 329 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 135/285 (47%), Positives = 178/285 (62%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDLL+ +IK G R DRT VGT S FG QMRFDL FPLLTTK+V ++ V ELLW Sbjct: 45 QQYLDLLKRIIKTGDQRIDRTAVGTLSIFGTQMRFDLRDSFPLLTTKRVFFRGVAEELLW 104 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G +N L V IWD + ++ G+LGP+YG QWR + Sbjct: 105 FVAGKTNAKLLQAKKVHIWDFNSTREFLDKCGHTDRDEGDLGPVYGFQWRHFGAEYRGCD 164 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159 DY G +DQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QF+V G+L Sbjct: 165 DDYTGQGVDQLQQVIDTIRNNPADRRIIMSAWNPLDIPKMALPPCHCLVQFFVSQSRGEL 224 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQ+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E Q Sbjct: 225 SCQMYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLQEQ 284 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R PR P++ I + + F Y+DF + Y P+ I K++V Sbjct: 285 MKRVPRPFPKLRIKRQVEKIEDFCYDDFEVVDYNPYEKIQMKMAV 329 >gi|313608068|gb|EFR84144.1| thymidylate synthase [Listeria monocytogenes FSL F2-208] Length = 317 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 4 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 64 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 123 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 124 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 183 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 243 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 244 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 303 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 304 GYNPDPAIKAPISV 317 >gi|327440143|dbj|BAK16508.1| thymidylate synthase [Solibacillus silvestris StLB046] Length = 325 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 138/320 (43%), Positives = 186/320 (58%), Gaps = 57/320 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 H YL+LL++++ G+D+ DRTG GTRS FGYQMRF+L +GFPLLTTK+V +K V ELLW Sbjct: 6 HTYLNLLQYILDNGTDKSDRTGTGTRSVFGYQMRFNLQEGFPLLTTKRVPFKLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL ++ IWDEWA Sbjct: 66 FIKGDTNIRYLLQNNNHIWDEWAFKKWVESEEYGGPDMSDFGRRSLIDEAFNVQYQKELS 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W +G IDQ+ + ++ +P SRR IV+ Sbjct: 126 TFCERVLQDDEFASKYGDLGNVYGKQWRNWTTSEGESIDQLQDAIDLIKHNPDSRRIIVN 185 Query: 132 AWNVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 AWN + K ALPPCH +FQFYV GKLSC L QRS D FLG+PFNIASY+LL Sbjct: 186 AWNPEDVIDAGGKGSKAALPPCHAMFQFYVAEGKLSCMLTQRSADTFLGVPFNIASYALL 245 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRY 244 T ++A G + GEF+H++ D H+Y+NH EQ QL+R P+ LP + +N + F Sbjct: 246 THLIAHECGLEVGEFVHSMADTHIYSNHLEQVKEQLAREPKQLPTLKLNLEKQSIFDFEM 305 Query: 245 EDFTLRSYEPHAAILAKVSV 264 ED +L Y PH +I A ++V Sbjct: 306 EDISLEGYHPHPSIKAPIAV 325 >gi|109706879|gb|ABG43014.1| thymidilate synthase [Candida glabrata] gi|109706881|gb|ABG43015.1| thymidilate synthase [Candida glabrata] gi|109706883|gb|ABG43016.1| thymidilate synthase [Candida glabrata] Length = 298 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 135/290 (46%), Positives = 174/290 (60%), Gaps = 27/290 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL +IK G R DRTG GT S F Q+RF L FPLLTTKKV K ++ EL Sbjct: 9 KQYLDLCERIIKEGEFRPDRTGTGTYSLFAPPQLRFSLKDDTFPLLTTKKVFTKGIILEL 68 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++ G+LGP+YG QWR + Sbjct: 69 LWFIAGCTDAKKLSDQGVKIWEGNGSREYLDKMGFVDRREGDLGPVYGFQWRHFGAEYKT 128 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK- 158 DY G +DQ+ ++ L+ +PY RR I+SAWN KMALPPCH QFYV+ K Sbjct: 129 CEDDYTGQGVDQLKEVIHKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFSQFYVNFPKD 188 Query: 159 ----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 LSC LYQRS D+ LG+PFNIASY+LLT M+A V + GEFIHTLGD H+Y +H + Sbjct: 189 GKPQLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVCDMEPGEFIHTLGDAHVYKDHVD 248 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+SR+PR P++ IN + D+ F++EDF L Y+PH I +SV Sbjct: 249 ALKEQISRTPRDFPKLRINRKVSDIDDFKFEDFVLEEYDPHPRIQMNMSV 298 >gi|9626026|ref|NP_040272.1| thymidylate synthase [Saimiriine herpesvirus 2] gi|136610|sp|P06854|TYSY_SHV21 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|66442|pir||SYBEHS thymidylate synthase (EC 2.1.1.45) - saimiriine herpesvirus 1 gi|60391|emb|CAA45693.1| thymidylate synthase [Saimiriine herpesvirus 2] gi|330999|gb|AAA46146.1| thymidylate synthase [Saimiriine herpesvirus 2] gi|331075|gb|AAA46175.1| dTMP synthase [Saimiriine herpesvirus 2] Length = 294 Score = 349 bits (895), Expect = 3e-94, Method: Composition-based stats. Identities = 132/283 (46%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL ++H++ +GS + DRTG GT S FG Q RF L FPLLTTK+V W+ VV ELLW Sbjct: 12 HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102 F+RG ++ L GV IWD + +G+LGP+YG QWR + Sbjct: 72 FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYKGVG 131 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ +++ +P RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC Sbjct: 132 RDYKGEGVDQLKQLIDTIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT M+A V GEFIHT+GD H+Y +H + +QL+ Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVPGEFIHTIGDAHIYVDHIDALKMQLT 251 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + N+ + F+ +D L +Y PH I ++V Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294 >gi|66556831|ref|XP_624369.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase [Apis mellifera] Length = 305 Score = 348 bits (894), Expect = 4e-94, Method: Composition-based stats. Identities = 138/284 (48%), Positives = 177/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+L+ +IK G+ + DRTGVGT S FG QMRF+L FPLLTTK+V WK VV ELL Sbjct: 22 YQYLNLIEKIIKDGTRKDDRTGVGTLSIFGTQMRFNLRNNIFPLLTTKRVFWKGVVEELL 81 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +N L V IWD + ++G+LGPIYG QWR + Sbjct: 82 WFIKGSTNAKKLSEKDVHIWDANSSREFLDSCGFIDREEGDLGPIYGFQWRHFGATYKDM 141 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY+G IDQ+ ++ +R P RR I++AWN I KMALPPCHC QFYV N +LS Sbjct: 142 YKDYNGEGIDQLKEVIDKIRYSPNDRRIIMTAWNPIDIPKMALPPCHCFVQFYVSNEELS 201 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASYSLL +LA + + GEFIHT+GD H+Y NH Q+ Sbjct: 202 CQLYQRSADMGLGVPFNIASYSLLIYILAHITNLKPGEFIHTMGDCHVYLNHISALKEQI 261 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + I N+ D+ F DF L Y+PHA I ++V Sbjct: 262 KRVPKPFPYLKIIRNVEDINDFTANDFELIGYDPHAKISMPMAV 305 >gi|50302825|ref|XP_451349.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640480|emb|CAH02937.1| KLLA0A07843p [Kluyveromyces lactis] Length = 312 Score = 348 bits (894), Expect = 4e-94, Method: Composition-based stats. Identities = 134/292 (45%), Positives = 173/292 (59%), Gaps = 29/292 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 QYLDL +I G R DRTG GT S F Q+RF+LS FPLLTTK+V K ++ EL Sbjct: 21 QQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIILEL 80 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++ G+LGP+YG QWR + Sbjct: 81 LWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYKT 140 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154 DY G +DQ+ I+ L+ +PY RR I+SAWN KMALPPCH QFYV Sbjct: 141 CDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSFPKG 200 Query: 155 --DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 +LSC LYQRS D+ LG+PFNIASY+LLT M+A V + GEFIHTLGD H+Y +H Sbjct: 201 EGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVYKDH 260 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + Q++R PR P++ I N+ D+ F+YEDF + Y PH I K+SV Sbjct: 261 VDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEITDYNPHGKIQMKMSV 312 >gi|290892999|ref|ZP_06555988.1| thymidylate synthase [Listeria monocytogenes FSL J2-071] gi|290557359|gb|EFD90884.1| thymidylate synthase [Listeria monocytogenes FSL J2-071] Length = 314 Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKTRILEDDAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVTDISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P AI A +SV Sbjct: 301 GYNPDPAIKAPISV 314 >gi|259149556|emb|CAY86360.1| Cdc21p [Saccharomyces cerevisiae EC1118] gi|323302856|gb|EGA56660.1| Cdc21p [Saccharomyces cerevisiae FostersB] gi|323307154|gb|EGA60437.1| Cdc21p [Saccharomyces cerevisiae FostersO] Length = 304 Score = 348 bits (893), Expect = 5e-94, Method: Composition-based stats. Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 31/294 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV + ++ EL Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWFL GD++ + L GV IWD ++ G+LGP+YG QWR + Sbjct: 71 LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G IDQ+ ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190 Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 +LSC LYQRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + Q+SR+PR P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 251 DHIDALKEQISRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304 >gi|83716002|ref|NP_001032905.1| thymidylate synthase [Bos taurus] gi|122144944|sp|Q2TA32|TYSY_BOVIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|83406125|gb|AAI11140.1| Thymidylate synthetase [Bos taurus] Length = 354 Score = 348 bits (893), Expect = 5e-94, Method: Composition-based stats. Identities = 129/320 (40%), Positives = 175/320 (54%), Gaps = 58/320 (18%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G R DRTG GT S FG Q R++L FPLLTTK+V WK V+ ELLWF Sbjct: 35 QYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRDEFPLLTTKRVFWKGVLEELLWF 94 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 95 IKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWRHFGAEYKDMDS 154 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 155 EYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 214 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ--- 219 LYQRSGD+ LG+PFNIASY+LLT M+A + + G+F+HTLGD H+Y NH E Q Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQALM 274 Query: 220 -----------------------------------LSRSPRTLPQMIINPNIVDLLSFRY 244 L R PR P++ I + + F+ Sbjct: 275 ELRGQSSRSLDGDGQAGTSRWAPVATDTERDRCCELQREPRPFPKLKILRKVETIDDFQA 334 Query: 245 EDFTLRSYEPHAAILAKVSV 264 EDF + Y P+ I +++V Sbjct: 335 EDFQIEGYNPNPTIKMEMAV 354 >gi|148544000|ref|YP_001271370.1| thymidylate synthase [Lactobacillus reuteri DSM 20016] gi|184153394|ref|YP_001841735.1| thymidylate synthase [Lactobacillus reuteri JCM 1112] gi|227364913|ref|ZP_03848958.1| thymidylate synthase [Lactobacillus reuteri MM2-3] gi|325682462|ref|ZP_08161979.1| thymidylate synthase [Lactobacillus reuteri MM4-1A] gi|172048237|sp|A5VJK9|TYSY_LACRD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148531034|gb|ABQ83033.1| thymidylate synthase [Lactobacillus reuteri DSM 20016] gi|183224738|dbj|BAG25255.1| thymidylate synthase [Lactobacillus reuteri JCM 1112] gi|227070060|gb|EEI08438.1| thymidylate synthase [Lactobacillus reuteri MM2-3] gi|324978301|gb|EGC15251.1| thymidylate synthase [Lactobacillus reuteri MM4-1A] Length = 320 Score = 348 bits (893), Expect = 5e-94, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL+R+V+ G + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV + + ELLW Sbjct: 8 EQYLDLIRYVLANGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIRFLLQHKNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W G+ IDQI++++Q ++ P SRR IVS Sbjct: 128 AFCQRILEDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NH +Q QL+R+P P++I+ + + D L Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307 Query: 252 YEPHAAILAKVSV 264 Y AI A V+V Sbjct: 308 YTHEPAIKAPVAV 320 >gi|139472812|ref|YP_001129361.1| ORF70 [Human herpesvirus 8] gi|6686050|sp|P90463|TYSY_HHV8P RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|1718263|gb|AAC57092.1| ORF 70 [Human herpesvirus 8 type M] gi|1778600|gb|AAC56948.1| thymidylate synthase homolog [Human herpesvirus 8] gi|2246548|gb|AAB62673.1| ORF 70 [Human herpesvirus 8] gi|3551759|gb|AAC34940.1| thymidylate synthase [Human herpesvirus 8] gi|87196833|gb|ABD28859.1| ORF70 [Human herpesvirus 8] gi|261853484|gb|ACY00406.1| ORF70 [Human herpesvirus 8] gi|312275152|gb|ADQ57889.1| ORF70 protein [Human herpesvirus 8] Length = 337 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 143/282 (50%), Positives = 182/282 (64%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL LR ++ GSDR DRTG+GT S FG Q R+ L FPLLTTK+V W+ VV ELLWF Sbjct: 56 QYLRQLREILCRGSDRLDRTGIGTLSLFGMQARYSLRDHFPLLTTKRVFWRGVVQELLWF 115 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 L+G ++ L R GV IWD+ ++G+LGP+YG QWR + Sbjct: 116 LKGSTDSRELSRTGVKIWDKNGSREFLAGRGLAHRREGDLGPVYGFQWRHFGAAYVDADA 175 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G DQ+S IV ++ +P+ RR I+ AWN A + MALPPCH L QFYV +G+LSCQ Sbjct: 176 DYTGQGFDQLSYIVDLIKNNPHDRRIIMCAWNPADLSLMALPPCHLLCQFYVADGELSCQ 235 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASYSLLT MLA V G + GEFIHTLGD H+Y H E LQL+R Sbjct: 236 LYQRSGDMGLGVPFNIASYSLLTYMLAHVTGLRPGEFIHTLGDAHIYKTHIEPLRLQLTR 295 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I ++ + F +DF L Y PH I +++V Sbjct: 296 TPRPFPRLEILRSVSSMEEFTPDDFRLVDYCPHPTIRMEMAV 337 >gi|156849051|ref|XP_001647406.1| hypothetical protein Kpol_1018p80 [Vanderwaltozyma polyspora DSM 70294] gi|156118092|gb|EDO19548.1| hypothetical protein Kpol_1018p80 [Vanderwaltozyma polyspora DSM 70294] Length = 305 Score = 348 bits (892), Expect = 6e-94, Method: Composition-based stats. Identities = 135/290 (46%), Positives = 177/290 (61%), Gaps = 28/290 (9%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYL+L + +I G DR DRTG GT S F Q+RFDLS FPLLTTKKV K ++ ELL Sbjct: 16 QYLNLCQRIIDEGEDRPDRTGTGTYSIFAPPQLRFDLSGDKFPLLTTKKVFTKGIILELL 75 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+ G ++ L GV IW+ ++ G+LGP+YG QWR + Sbjct: 76 WFIAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYKTC 135 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD----- 155 DY G +DQ+ I+ ++ +PY RR I+SAWN KMALPPCH QFYV+ Sbjct: 136 EDDYTGKGVDQLQEIIYKIKNNPYDRRIIMSAWNPPDFPKMALPPCHVFCQFYVNFPKDG 195 Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 KLSC LYQRS D+ LG+PFNIASY+LLT M+A + + GEFIHT+GD H+Y +H E Sbjct: 196 SKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHICDMEAGEFIHTMGDAHVYKDHIE 255 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+SR+PR P++ I +I D+ F++EDF + Y PH I K+SV Sbjct: 256 ALQEQMSRTPREFPKLKIKRDIKDINDFKFEDFEIVDYHPHGKIQMKMSV 305 >gi|16117371|gb|AAL14421.1|AF188480_3 thymidylate synthase [Macropodid herpesvirus 1] Length = 316 Score = 348 bits (892), Expect = 6e-94, Method: Composition-based stats. Identities = 136/282 (48%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + +++ G + DRTG GT S FG Q R++L FPLLTTK+V+WK VV ELLWF Sbjct: 35 QYLYQVARILREGYRKGDRTGTGTLSVFGTQARYNLRGEFPLLTTKRVYWKGVVEELLWF 94 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 +RG +N L GV IWD +D G+LGP+YG QWR + Sbjct: 95 VRGATNTKELSSRGVKIWDAHGSRDFLDKRGFPSREEGDLGPVYGFQWRHFGAEYRGSEA 154 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G DQ+ ++ +L+ +P RR ++ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 155 DYSGQGADQLQYVIDTLKRNPDDRRIVMCAWNPKDLPLMALPPCHTLCQFYVANGELSCQ 214 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V+G GE +HTLGD H+Y NH E+ +QL R Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHVVGLVPGELVHTLGDAHIYLNHIERLRIQLQR 274 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR PQ+ I + + FR EDF L Y PH+A+ +++V Sbjct: 275 EPRPFPQLKIIRAVTSIDYFRSEDFVLEGYRPHSALKMELAV 316 >gi|9631261|ref|NP_048042.1| thymidylate synthase [Ateline herpesvirus 3] gi|4019297|gb|AAC95595.1| thymidylate synthase [Ateline herpesvirus 3] Length = 290 Score = 348 bits (892), Expect = 6e-94, Method: Composition-based stats. Identities = 133/283 (46%), Positives = 176/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL ++H++ G+ + DRTGVGT S FG Q R+ L K FPLLTTK+V W+ VV ELLW Sbjct: 8 HQYLSQVKHILNCGNFKHDRTGVGTLSVFGMQSRYSLEKDFPLLTTKRVFWRGVVEELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSW-------- 101 F+RG ++ L GV IWD ++G+LGP+YG QWR + Sbjct: 68 FIRGSTDSKELAASGVHIWDANGSRSYLDKLGFCDREEGDLGPVYGFQWRHFGAEYQGLK 127 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y G +DQ+ I+ ++ +P RR ++ AWNV + KMALPPCH L QFYV +GKLSC Sbjct: 128 HNYGGEGVDQLKQIINTIHTNPTDRRMLMCAWNVLDVPKMALPPCHVLSQFYVCDGKLSC 187 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT M+A V GEFIHTLGD H+Y NH + QL+ Sbjct: 188 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTDLVPGEFIHTLGDAHIYVNHIDALTEQLT 247 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + I + F+ D L +Y P+ +I ++V Sbjct: 248 RTPRPFPTLKFARKIASIDDFKANDIILENYNPYPSIKMPMAV 290 >gi|81428612|ref|YP_395612.1| thymidylate synthase [Lactobacillus sakei subsp. sakei 23K] gi|123755841|sp|Q38WX8|TYSY_LACSS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|78610254|emb|CAI55303.1| Thymidylate synthase [Lactobacillus sakei subsp. sakei 23K] Length = 316 Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R +++ G + DRT GT S FGYQMRF+L +GFPLLTTKK+ + + ELLWFL Sbjct: 6 YLDLARTILEEGHYKGDRTNTGTYSLFGYQMRFNLQEGFPLLTTKKMPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADK------------------------------------- 86 +GDSN+ YL +H IWDEWA + Sbjct: 66 KGDSNIRYLLQHNNHIWDEWAFERFVKSTDYTGPDMTDFSHRAQDDADFKVVYQEQMRLF 125 Query: 87 -------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 GELG IYG QWR+W G IDQI ++++ ++ +P SRR IVSAW Sbjct: 126 NDRILADEGFAKQYGELGDIYGKQWRAWQTRSGETIDQIKNVIEMIKTNPDSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV++GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHTLGD H+Y+NH Q QL+RS P++ +NP+ + F D + +YE Sbjct: 246 LEVGEFIHTLGDAHIYSNHVTQVKTQLARSMHAAPKLWLNPDKKSIFDFDVADIKVENYE 305 Query: 254 PHAAILAKVSV 264 AI A V+V Sbjct: 306 SEPAIKAPVAV 316 >gi|298345140|ref|YP_003717827.1| thymidylate synthase [Mobiluncus curtisii ATCC 43063] gi|315656496|ref|ZP_07909385.1| thymidylate synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235201|gb|ADI66333.1| thymidylate synthase [Mobiluncus curtisii ATCC 43063] gi|315493055|gb|EFU82657.1| thymidylate synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 272 Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 134/263 (50%), Positives = 183/263 (69%), Gaps = 2/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DLL ++ G ++ DRTG GTRS FG Q+R+DLS+GFP +TTK ++W VV ELLW Sbjct: 12 HQYEDLLADIMSHGVEKPDRTGTGTRSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G +N +L + + IWDEWAD+ G+LGPIYG QWR+WP G +DQ+ ++++L+ Sbjct: 72 FLQGGTNNRWLQENNIHIWDEWADESGDLGPIYGHQWRAWPTAAG-PVDQVKKLLETLQN 130 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV+ +D+MAL PCH FQ +V G+LS Q+YQRS D+FLG+PFNIASY Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA Q GE + T GD H+Y+NH +Q LQLSR P P + ++ + Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFPILELD-KAESIDG 249 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + ++ L +Y+ H I A V+V Sbjct: 250 YTFDMIRLANYQHHPKISAPVAV 272 >gi|136609|sp|P12462|TYSY_HSVAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|331064|gb|AAA46170.1| thymidylate synthase [Ateline herpesvirus 2] Length = 290 Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 132/283 (46%), Positives = 176/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL ++H++ G+ + DRTGVGT S FG Q R+ L K FPLLTTK+V W+ VV ELLW Sbjct: 8 HQYLSQVKHILNCGNFKHDRTGVGTLSVFGMQSRYSLEKDFPLLTTKRVFWRGVVEELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW-------- 101 F+RG ++ L GV IWD ++G+LGP+YG QWR + Sbjct: 68 FIRGSTDSKELAASGVHIWDANGSRSYLDKLGLFDREEGDLGPVYGFQWRHFGAEYQGLK 127 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y G +DQ+ I+ ++ +P RR ++ AWNV + KMALPPCH L QFYV +GKLSC Sbjct: 128 HNYGGEGVDQLKQIINTIHTNPTDRRMLMCAWNVLDVPKMALPPCHVLSQFYVCDGKLSC 187 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT M+A V GEFIHTLGD H+Y NH + QL+ Sbjct: 188 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTDLVPGEFIHTLGDAHVYVNHVDALTEQLT 247 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + + + F+ D L +Y P+ +I ++V Sbjct: 248 RTPRPFPTLKFARKVASIDDFKANDIILENYNPYPSIKMPMAV 290 >gi|323331459|gb|EGA72874.1| Cdc21p [Saccharomyces cerevisiae AWRI796] Length = 302 Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 135/294 (45%), Positives = 176/294 (59%), Gaps = 31/294 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV + ++ EL Sbjct: 9 EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 68 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWFL GD++ + L GV IWD ++ G+LGP+YG QWR + Sbjct: 69 LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 128 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G IDQ+ ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV Sbjct: 129 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 188 Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 +LSC LYQRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y Sbjct: 189 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 248 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + Q++R+PR P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 249 DHIDALKEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 302 >gi|289435221|ref|YP_003465093.1| hypothetical protein lse_1858 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171465|emb|CBH28009.1| thyA [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 314 Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 149/314 (47%), Positives = 192/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 ESFKIRILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G GEF+HT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P A+I A +SV Sbjct: 301 GYNPDASIKAPISV 314 >gi|30348576|emb|CAC84368.1| thymidylate synthase [Saimiriine herpesvirus 2] Length = 294 Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 132/283 (46%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL ++H++ +GS + DRTG GT S FG Q RF L FPLLTTK+V W+ VV ELLW Sbjct: 12 HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102 F+RG ++ L GV IWD + +G+LGP+YG QWR + Sbjct: 72 FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYRGSK 131 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ +++ +P RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC Sbjct: 132 RDYKGEGVDQLKQLIATIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT M+A V GEFIHT+GD H+Y +H + +QL+ Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVPGEFIHTIGDAHIYVDHIDALKMQLT 251 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + N+ + F+ +D L +Y PH I ++V Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294 >gi|7330001|gb|AAF59990.1|AF210726_11 thymidylate synthetase [Rhesus monkey rhadinovirus H26-95] Length = 333 Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL L +IK G R DRTGVGTRS FG Q R++L FPLLTTK+V W+ VV ELLWF Sbjct: 52 QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP-------- 102 +RG ++ + L R GV IWD + +G+LGP+YG QWR + Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y+G +DQ+ +V + P+ RR ++ AWN A + +MALPPCH L QFYV G+LSCQ Sbjct: 172 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRS D+ LG+PFNIASY+LLT ++A V G G+F+HTLGD H+YNNH + LQL R Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 291 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + L F D +L Y+PH I +++V Sbjct: 292 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 333 >gi|83578104|ref|NP_014717.2| Cdc21p [Saccharomyces cerevisiae S288c] gi|136618|sp|P06785|TYSY_YEAST RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName: Full=Cell division cycle protein 21; AltName: Full=Constitutive RNR3 transcription protein 9 gi|172990|gb|AAA60940.1| thymidylate synthase [Saccharomyces cerevisiae] gi|2104886|emb|CAA94559.1| YOR29-25 [Saccharomyces cerevisiae] gi|190407409|gb|EDV10676.1| thymidylate synthase [Saccharomyces cerevisiae RM11-1a] gi|256270905|gb|EEU06037.1| Cdc21p [Saccharomyces cerevisiae JAY291] gi|285814960|tpg|DAA10853.1| TPA: Cdc21p [Saccharomyces cerevisiae S288c] gi|323352068|gb|EGA84605.1| Cdc21p [Saccharomyces cerevisiae VL3] Length = 304 Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 135/294 (45%), Positives = 176/294 (59%), Gaps = 31/294 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV + ++ EL Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWFL GD++ + L GV IWD ++ G+LGP+YG QWR + Sbjct: 71 LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G IDQ+ ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190 Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 +LSC LYQRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + Q++R+PR P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 251 DHIDALKEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304 >gi|313632688|gb|EFR99662.1| thymidylate synthase [Listeria seeligeri FSL N1-067] Length = 314 Score = 347 bits (891), Expect = 8e-94, Method: Composition-based stats. Identities = 150/314 (47%), Positives = 192/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 ESFKTRILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G GEF+HT+GD HLYNNH EQ QLSR+P LP++I++ + F D +L Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLILSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P A+I A +SV Sbjct: 301 GYNPDASIKAPISV 314 >gi|331073|gb|AAA46174.1| thymidylate synthase [Saimiriine herpesvirus 2] Length = 294 Score = 347 bits (891), Expect = 9e-94, Method: Composition-based stats. Identities = 132/283 (46%), Positives = 178/283 (62%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQYL ++H++ +GS + DRTG GT S FG Q RF L FPLLTTK+V W+ VV ELLW Sbjct: 12 HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102 F+RG ++ L GV IWD + +G+LGP+YG QWR + Sbjct: 72 FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYKGVG 131 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ +++ +P RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC Sbjct: 132 RDYKGEGVDQLKQLIDTIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRS D+ LG+PFNIASYSLLT M+A V GEFIHT+GD H+Y +H + +QL+ Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVLGEFIHTIGDAHIYVDHIDALKMQLT 251 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P + N+ + F+ +D L +Y PH I ++V Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294 >gi|18653820|ref|NP_570754.1| thymidylate synthase [Macacine herpesvirus 5] gi|5823015|gb|AAD53009.1|AF087411_2 thymidylate synthase [Macacine herpesvirus 5] gi|4494918|gb|AAD21340.1| thymidylate synthase [Macaca mulatta rhadinovirus 17577] Length = 333 Score = 347 bits (891), Expect = 9e-94, Method: Composition-based stats. Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL L +IK G R DRTGVGTRS FG Q R++L FPLLTTK+V W+ VV ELLWF Sbjct: 52 QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP-------- 102 +RG ++ + L R GV IWD + +G+LGP+YG QWR + Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y+G +DQ+ +V + P+ RR ++ AWN A + +MALPPCH L QFYV G+LSCQ Sbjct: 172 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRS D+ LG+PFNIASY+LLT ++A V G G+F+HTLGD H+YNNH + LQL R Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 291 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + L F D +L Y+PH I +++V Sbjct: 292 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 333 >gi|256851235|ref|ZP_05556624.1| thymidylate synthase [Lactobacillus jensenii 27-2-CHN] gi|260660659|ref|ZP_05861574.1| thymidylate synthase [Lactobacillus jensenii 115-3-CHN] gi|282934702|ref|ZP_06339945.1| thymidylate synthase [Lactobacillus jensenii 208-1] gi|297206102|ref|ZP_06923497.1| thymidylate synthase [Lactobacillus jensenii JV-V16] gi|256616297|gb|EEU21485.1| thymidylate synthase [Lactobacillus jensenii 27-2-CHN] gi|260548381|gb|EEX24356.1| thymidylate synthase [Lactobacillus jensenii 115-3-CHN] gi|281301277|gb|EFA93578.1| thymidylate synthase [Lactobacillus jensenii 208-1] gi|297149228|gb|EFH29526.1| thymidylate synthase [Lactobacillus jensenii JV-V16] Length = 318 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 148/313 (47%), Positives = 181/313 (57%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+++++ G D+ DRTG GTRS FG QMRFDLS+GFPLLTTKKV + + ELLW Sbjct: 6 QPYLDLLKNIMETGHDKTDRTGTGTRSRFGAQMRFDLSEGFPLLTTKKVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L H IWDEWA Sbjct: 66 FLRGDTNIKFLLEHNNHIWDEWAFKKWVNSDDYHGPDMTDFGLRSQADSEFKKQYDEQMQ 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G LG +YG QWR W G IDQI ++ L P SRR IVS Sbjct: 126 IFTKRILEDADFAKKFGNLGDVYGAQWRHWKKRSGGSIDQIQEVLNQLTIHPDSRRMIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV + KLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDVPTSALPPCHTLFQFYVADNKLSLQLYQRSGDMFLGVPFNIASYSLLLSLVARQ 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q + QLSR P P++ +NP D+ F ED + Sbjct: 246 TGLEVGEFVHTLGDAHIYKNHFDQVEKQLSRDPFDSPKLWLNPAKKDISDFEMEDIKVVD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YKHHGVIKAPVAV 318 >gi|304390727|ref|ZP_07372679.1| thymidylate synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325610|gb|EFL92856.1| thymidylate synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 272 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 134/263 (50%), Positives = 183/263 (69%), Gaps = 2/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DLL ++ G ++ DRTG GTRS FG Q+R+DLS+GFP +TTK ++W VV ELLW Sbjct: 12 HQYEDLLADIMSHGVEKSDRTGTGTRSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G +N +L + + IWDEWAD+ G+LGPIYG QWR+WP G +DQ+ ++++L+ Sbjct: 72 FLQGGTNNRWLQENNIHIWDEWADESGDLGPIYGHQWRAWPTAAG-PVDQVKKLLETLQN 130 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV+ +D+MAL PCH FQ +V G+LS Q+YQRS D+FLG+PFNIASY Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA Q GE + T GD H+Y+NH +Q LQLSR P P + ++ + Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFPILELD-KAESIDG 249 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + ++ L +Y+ H I A V+V Sbjct: 250 YTFDMIRLANYQHHPKISAPVAV 272 >gi|332666783|ref|YP_004449571.1| Thymidylate synthase [Haliscomenobacter hydrossis DSM 1100] gi|332335597|gb|AEE52698.1| Thymidylate synthase [Haliscomenobacter hydrossis DSM 1100] Length = 301 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 163/306 (53%), Positives = 200/306 (65%), Gaps = 47/306 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY LL+H++K G + DRTG GT S FGYQ+RFDL+ GFPL+TTKKVH KS++HELL Sbjct: 1 MQQYHTLLQHILKNGVRKHDRTGTGTISVFGYQVRFDLNDGFPLITTKKVHIKSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL+GD+N+ YL R+GV IW+EW Sbjct: 61 WFLKGDTNIQYLVRNGVGIWNEWPFQFWLQNENPDLAQTKYSPAWKDKLSEFVERIKTDD 120 Query: 85 ---DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 + G LGP+YG QWR++ +DQI +V +R P SRR +VSAWN I M Sbjct: 121 DFATQWGNLGPVYGQQWRNF-----EGVDQIVQVVNDIRRSPDSRRLLVSAWNPKEIPVM 175 Query: 142 ---ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 LPPCH LFQFYV GKLSCQLYQRS DVFLG+PFNIASY+LLT+M+A V G Q GE Sbjct: 176 VKSGLPPCHALFQFYVAEGKLSCQLYQRSADVFLGVPFNIASYALLTLMMAQVCGLQPGE 235 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 FIH+ GD HLY NH EQA +QLSR PR+LPQM +NP + ++ F+YEDFTL Y+P+ AI Sbjct: 236 FIHSFGDAHLYLNHLEQAQIQLSRQPRSLPQMKLNPAVREIFDFQYEDFTLSDYDPYPAI 295 Query: 259 LAKVSV 264 A+VSV Sbjct: 296 KAEVSV 301 >gi|227543427|ref|ZP_03973476.1| thymidylate synthase [Lactobacillus reuteri CF48-3A] gi|300910094|ref|ZP_07127554.1| thymidylate synthase [Lactobacillus reuteri SD2112] gi|227186579|gb|EEI66650.1| thymidylate synthase [Lactobacillus reuteri CF48-3A] gi|300892742|gb|EFK86102.1| thymidylate synthase [Lactobacillus reuteri SD2112] Length = 320 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL+R+V+ G + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV + + ELLW Sbjct: 8 EQYLDLIRYVLTNGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIRFLLQHKNHIWDEWAFKKWVESAEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W G+ IDQI++++Q ++ P SRR IVS Sbjct: 128 AFCQRILEDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NH +Q QL+R+P P++I+ + + D L Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307 Query: 252 YEPHAAILAKVSV 264 Y AI A V+V Sbjct: 308 YTYEPAIKAPVAV 320 >gi|90415501|ref|ZP_01223435.1| thymidylate synthase [marine gamma proteobacterium HTCC2207] gi|90332824|gb|EAS47994.1| thymidylate synthase [marine gamma proteobacterium HTCC2207] Length = 301 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 149/306 (48%), Positives = 196/306 (64%), Gaps = 47/306 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++H+ G + DRT GT+S FG+QMRFDLS+GFPL+TTKKVH KS++HELL Sbjct: 1 MKQYLDLIKHIRDHGVKKEDRTATGTQSIFGHQMRFDLSQGFPLVTTKKVHLKSILHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIW---------------------------------------D 81 WF+RGD+N+ YL +GV IW D Sbjct: 61 WFIRGDTNIRYLVENGVGIWNDWPYQSWLRETDQEADFPMYSPEWKAKMKEFIQRIKDDD 120 Query: 82 EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 E+A + G+LGP+YG QWR++ +DQ++ +V+ ++++P SRR IVSAWN I M Sbjct: 121 EFAQQYGDLGPVYGHQWRNF-----EGVDQLAQVVEDIKSNPDSRRLIVSAWNPKDIPVM 175 Query: 142 ---ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 LPPCH LFQFYV G+LSCQLYQRS DVFLG+PFNIASY++LT+M+A V G + G+ Sbjct: 176 VKSGLPPCHSLFQFYVTEGRLSCQLYQRSADVFLGVPFNIASYAILTLMIAQVTGLEPGD 235 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 F+HT GD HLY+NH +Q + LSR LP + INP + +L F +EDF L Y+ H I Sbjct: 236 FVHTFGDAHLYSNHMDQVEELLSRETYPLPTLAINPAVDNLFDFVFEDFELLDYQSHGPI 295 Query: 259 LAKVSV 264 A V+V Sbjct: 296 SAPVAV 301 >gi|300742119|ref|ZP_07072140.1| thymidylate synthase [Rothia dentocariosa M567] gi|300381304|gb|EFJ77866.1| thymidylate synthase [Rothia dentocariosa M567] Length = 302 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 151/285 (52%), Positives = 191/285 (67%), Gaps = 24/285 (8%) Query: 4 YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 Y DLLR ++ D R+DRTG GT FG QMRFDL FPL+TTK+VH+KSV Sbjct: 18 YEDLLREILDENRDAIAADAQRKDRTGTGTFGVFGRQMRFDLRDSFPLITTKRVHFKSVA 77 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 ELLWFLRG SN+ +L GV+IWDEWAD++G+LGP+YGVQWRSWP DG IDQI+ ++ Sbjct: 78 VELLWFLRGSSNIRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 137 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVF 171 +SL+ +P SRRHIVSAWN A +D+MALPPCH +FQFYV +LSCQLYQRS D+F Sbjct: 138 ESLKTNPSSRRHIVSAWNPAEVDEMALPPCHAMFQFYVHERPDGVKELSCQLYQRSADMF 197 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SRSPR---- 225 LG+PFNIASY+LLT ++A +G + GEFI T GD H+Y+NH EQ QL P Sbjct: 198 LGVPFNIASYALLTYLIAHEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGNDPEGNPY 257 Query: 226 ------TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+++I + + YEDF L Y+ H I A ++V Sbjct: 258 PPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGISAPIAV 302 >gi|300361883|ref|ZP_07058060.1| thymidylate synthase [Lactobacillus gasseri JV-V03] gi|300354502|gb|EFJ70373.1| thymidylate synthase [Lactobacillus gasseri JV-V03] Length = 327 Score = 346 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 143/313 (45%), Positives = 183/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRF+LS GFP+LTTK+V + + ELLW Sbjct: 15 QPYLDLLNKIMTEGHDKEDRTGTGTRSLFGAQMRFNLSDGFPILTTKRVPFGLIKSELLW 74 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 75 FLRGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDTKFKKVYQEEMK 134 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W +G IDQI +++ ++ PYSRR IVS Sbjct: 135 RFGERILADQDFAAKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 194 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 195 AWNPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQE 254 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHTLGD H+Y NHF+Q L+R P P++ +NP+ + F D L + Sbjct: 255 TGLKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVN 314 Query: 252 YEPHAAILAKVSV 264 Y+ H+ I A V+V Sbjct: 315 YKHHSTIKAPVAV 327 >gi|323335494|gb|EGA76779.1| Cdc21p [Saccharomyces cerevisiae Vin13] gi|323346516|gb|EGA80803.1| Cdc21p [Saccharomyces cerevisiae Lalvin QA23] Length = 304 Score = 346 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 135/294 (45%), Positives = 175/294 (59%), Gaps = 31/294 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV + ++ EL Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWFL GD++ + L GV IWD ++ G+LGP+YG QWR + Sbjct: 71 LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G IDQ+ ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190 Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 +LSC LYQRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + Q+ R+PR P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 251 DHIDALKEQIXRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304 >gi|227498216|ref|ZP_03928387.1| thymidylate synthase [Actinomyces urogenitalis DSM 15434] gi|226832398|gb|EEH64781.1| thymidylate synthase [Actinomyces urogenitalis DSM 15434] Length = 295 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 140/264 (53%), Positives = 181/264 (68%), Gaps = 4/264 (1%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +LL V+ G+ + DRTG GTRS F Q+R+DLS+GFP +TTK V K+V ELLWFL Sbjct: 33 YEELLAEVLLDGAPKGDRTGTGTRSLFARQLRYDLSQGFPRVTTKFVAMKAVKGELLWFL 92 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +G SN+++LH G++IWDEWAD+ GELGP+YGVQWRSWP G IDQI+ ++ +LR DP Sbjct: 93 QGASNIAWLHEQGITIWDEWADEHGELGPVYGVQWRSWPSRRGEAIDQITQLIHTLRHDP 152 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 SRR +VSAWNV+ + MAL PCH FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L Sbjct: 153 DSRRMLVSAWNVSELGAMALAPCHAFFQCYVADGRLSLQVYQRSADLFLGVPFNIASYAL 212 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDLLS 241 LT MLA G + GE + T GD H+Y+NH Q QLSR P P + + + + S Sbjct: 213 LTHMLAQQAGLEPGELVWTGGDCHIYDNHLAQVREQLSRVPQAYAFPTLRL-RHAESIDS 271 Query: 242 FRYEDFTLR-SYEPHAAILAKVSV 264 + ED Y+ H I A V+V Sbjct: 272 YTMEDIDASAGYQHHPVIKAPVAV 295 >gi|149601|gb|AAA25255.1| thymidylate synthase [Lactobacillus casei] Length = 329 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 17 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 76 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 77 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 136 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 137 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 196 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 197 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 256 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 257 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 316 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 317 YDPYPAIKAPVAV 329 >gi|91093359|ref|XP_969294.1| PREDICTED: similar to thymidylate synthase [Tribolium castaneum] gi|270015300|gb|EFA11748.1| hypothetical protein TcasGA2_TC004238 [Tribolium castaneum] Length = 313 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 130/283 (45%), Positives = 178/283 (62%), Gaps = 21/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL +R +++ G R DRT +GT S FG QMR+ L FPLLTTK+V W++VV ELL Sbjct: 30 YQYLSHIRQILEKGVQRMDRTRIGTLSIFGVQMRYSLRDNVFPLLTTKRVFWRAVVEELL 89 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +N + L V IWD + ++G+LGPIYG QWR + Sbjct: 90 WFIKGSTNSNDLKEKNVHIWDANSSRAFLDSVGLEEYEEGDLGPIYGFQWRHFGAEYKGV 149 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY +DQ++ ++ ++R +P RR I+SAWN + KMALPPCHCL QF+V G+LS Sbjct: 150 QGDYTNEGVDQLARVIHTIRTNPNDRRIIMSAWNPKDLHKMALPPCHCLAQFFVAEGELS 209 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQR+GD+ LG+PFNIASY+LLT M+A V G + GEFIH++GD H+Y NH E QL Sbjct: 210 CLLYQRAGDMGLGVPFNIASYALLTRMIAHVTGLKPGEFIHSIGDSHVYLNHVEPIKEQL 269 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 +R PR P + I + + F +EDF L Y PH + ++ Sbjct: 270 TRVPRAFPTLNIKRPVSSIDDFTFEDFELVGYNPHPKLYLPMA 312 >gi|212550867|ref|YP_002309184.1| thymidylate synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549105|dbj|BAG83773.1| thymidylate synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 256 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 146/264 (55%), Positives = 188/264 (71%), Gaps = 8/264 (3%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL V+ G ++DRT GT S FGY M F+L GFPLLTTKK+H K ++HELL Sbjct: 1 MKQYLDLCNRVLSEGVKKKDRTCTGTVSIFGYHMHFNLKDGFPLLTTKKLHVKPIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WF++GD+N+ YL+ HGV IWD+WA+K+G+LGPIYG QW +Q+ + V +++ Sbjct: 61 WFIKGDTNIKYLNDHGVYIWDKWANKNGDLGPIYGKQWNFK--------NQLRTAVDNIK 112 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IV++WNV + MALPPCH LFQFY+ NG+LS Q+YQRS D+FLG+PFNIAS Sbjct: 113 NNPDSRRIIVNSWNVKDLTSMALPPCHVLFQFYISNGELSLQMYQRSADIFLGLPFNIAS 172 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLL M+A V + G+FIH LGD H+Y NH EQ LQL+RSP+TLP M IN + + Sbjct: 173 YSLLLKMVAQVTNLKEGKFIHVLGDAHIYLNHLEQIQLQLTRSPKTLPIMKINSEVKSIF 232 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 F+YEDF L Y P+ I +VSV Sbjct: 233 DFKYEDFELERYTPYPHIKGEVSV 256 >gi|315303800|ref|ZP_07874296.1| thymidylate synthase [Listeria ivanovii FSL F6-596] gi|313627829|gb|EFR96466.1| thymidylate synthase [Listeria ivanovii FSL F6-596] Length = 314 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 151/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQAGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSSDYTGEDMTDFGLRAEKDPAFKEVYQTEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 EKFKARILEEEEFASKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN I MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 +G GEFIHT+GD HLYNNH EQ QL+R+P LP+++++ + F D +L Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLTRTPHALPKLVLSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P +AI A +SV Sbjct: 301 GYNPDSAIKAPISV 314 >gi|199598695|ref|ZP_03212109.1| thymidylate synthase [Lactobacillus rhamnosus HN001] gi|258508392|ref|YP_003171143.1| thymidylate synthase [Lactobacillus rhamnosus GG] gi|199590383|gb|EDY98475.1| thymidylate synthase [Lactobacillus rhamnosus HN001] gi|257148319|emb|CAR87292.1| Thymidylate synthase [Lactobacillus rhamnosus GG] gi|259649706|dbj|BAI41868.1| thymidylate synthase [Lactobacillus rhamnosus GG] Length = 316 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHKNHIWDEWAFEKWVKSDEYRGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|262198580|ref|YP_003269789.1| thymidylate synthase [Haliangium ochraceum DSM 14365] gi|262081927|gb|ACY17896.1| thymidylate synthase [Haliangium ochraceum DSM 14365] Length = 262 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 141/264 (53%), Positives = 173/264 (65%), Gaps = 2/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL+R +++ G R DRTG GT S FG Q+R+DL +GFPLLTTKKV + +VVHELL Sbjct: 1 MTPYLDLVRRILEHGERREDRTGTGTLSLFGAQLRYDLREGFPLLTTKKVLFSAVVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRG +N+ IW+ WAD GELGPIYG QWRSW DG+ IDQI + +R Sbjct: 61 WFLRGATNIHDGLAEHTPIWNAWADDSGELGPIYGAQWRSWRGPDGDSIDQIQGALDLIR 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV + +MALPPCH LFQFYV L CQLYQRS D+ LG+PFNIAS Sbjct: 121 TDPGSRRIIVSAWNVGELARMALPPCHLLFQFYVSGRHLDCQLYQRSADMALGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A + FIHTLGD H+Y NH + + QL R+P P++ I L Sbjct: 181 YALLLSMMAQSCDLEPRYFIHTLGDAHVYLNHVDGLERQLERTPYARPRVRIAD--KSLF 238 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +ED L Y+ H I +V+V Sbjct: 239 ELGFEDIELEGYQHHPFIKFEVAV 262 >gi|46519351|gb|AAS99999.1| JM22 [Macaca fuscata rhadinovirus] Length = 333 Score = 346 bits (887), Expect = 3e-93, Method: Composition-based stats. Identities = 135/282 (47%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL L +I+ G R DRTGVGTRS FG Q R++L FPLLTTK+V W+ VV ELLWF Sbjct: 52 QYLAHLDLIIRHGVQRDDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP-------- 102 +RG ++ + L R GV IWD + +G+LGP+YG QWR + Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY+G +DQ+ +V + P+ RR ++ AWN A + +MALPPCH L QFYV G+LSCQ Sbjct: 172 DYEGQGVDQLRYVVDLIVRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRS D+ LG+PFNIASY+LLT ++A V G G+F+HTLGD H+YNNH LQL R Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVGPLLLQLGR 291 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + L F D +L Y+PH I +++V Sbjct: 292 TPRPFPRLKILRKVTRLEDFTRADLSLEGYDPHPHIEMEMAV 333 >gi|229552189|ref|ZP_04440914.1| thymidylate synthase [Lactobacillus rhamnosus LMS2-1] gi|229314491|gb|EEN80464.1| thymidylate synthase [Lactobacillus rhamnosus LMS2-1] Length = 325 Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 13 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 72 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 73 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 132 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 133 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 192 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 193 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 252 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 253 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 312 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 313 YDPYPAIKAPVAV 325 >gi|256075176|ref|XP_002573896.1| bifunctional dihydrofolate reductase-thymidylate synthase [Schistosoma mansoni] gi|238659087|emb|CAZ30129.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Schistosoma mansoni] Length = 577 Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 130/281 (46%), Positives = 179/281 (63%), Gaps = 21/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHELLWF 62 YL+LLR+++ G +RRDRT GT FG Q+RF L +PLLTTK V ++ +V ELLWF Sbjct: 296 YLNLLRYILANGVERRDRTDTGTFGVFGPQLRFSLRNHEYPLLTTKTVFFRGIVEELLWF 355 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRS--------WP 102 +RG +N L V WD ++G+LGP+YG QWR Sbjct: 356 IRGSTNSRELAEKNVHFWDANGSREFLDGLGFTEREEGDLGPVYGFQWRHSGAEYVDCQT 415 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ++ +++ +R P+ RR ++ AWNV + KMALPPCHCL QFYV N +LSCQ Sbjct: 416 DYTGQGVDQLADVIKLIRERPWDRRIMIVAWNVKDLRKMALPPCHCLVQFYVANDELSCQ 475 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E Q+ R Sbjct: 476 LYQRSGDMGLGVPFNIASYALLTCMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKR 535 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 PR P++ I + ++ F++EDF L Y+P+ I K++ Sbjct: 536 VPRPFPKLEIIREVKNIDDFKFEDFKLIDYKPYPKIPMKMA 576 >gi|306921962|dbj|BAJ17638.1| dihydrofolate reductase [Neospora caninum] Length = 612 Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 135/285 (47%), Positives = 178/285 (62%), Gaps = 23/285 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL+ +I G+ DRTGVG S FG MRF L K FPLLTTK+V WK V+ ELLWF Sbjct: 328 QYLDLIADIINNGATMDDRTGVGVISKFGCTMRFSLDKAFPLLTTKRVFWKGVLEELLWF 387 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 +RGD+N ++L GV IWD+ ++ G++GP YG QWR + Sbjct: 388 IRGDTNANHLSEKGVKIWDKNVTREFLDSRNLSHREVGDIGPGYGFQWRHFGATYKDMHT 447 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ+ ++ LR +P RR +++AWN A +D+MALPPCH L QFYV+N + LSC Sbjct: 448 DYTGQGVDQLKKVINMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVENDRDLSC 507 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS DV LG+PFNIASYSLLT+M+A V + EFIH +G+ H+Y+NH E QL Sbjct: 508 VMYQRSCDVGLGVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYSNHVEALKEQLR 567 Query: 222 RSPRTLPQMII--NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I I ++ F EDF + Y PH I +++V Sbjct: 568 REPRPFPIVNILNKERIQEIDDFTAEDFEVVGYVPHGRIQMEMAV 612 >gi|312795490|ref|YP_004028412.1| Thymidylate synthase [Burkholderia rhizoxinica HKI 454] gi|312167265|emb|CBW74268.1| Thymidylate synthase (EC 2.1.1.45) [Burkholderia rhizoxinica HKI 454] Length = 278 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 150/274 (54%), Positives = 195/274 (71%), Gaps = 13/274 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL +L+ +++ G+ + DRTG GTRS FG R DLS GFPLLTTKK+H +S++HELLWFL Sbjct: 5 YLSILKDLLERGTLKSDRTGTGTRSLFGVSYRHDLSTGFPLLTTKKLHVRSILHELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 RGD+N+ YLH +GV+IWDEWA DGELGP+YG QWRSW + DG DQ+ +++ SLR P Sbjct: 65 RGDTNIRYLHENGVTIWDEWATPDGELGPVYGAQWRSWRNPDGTRTDQVQALLDSLRTKP 124 Query: 124 YSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 SRRHI++AWNV+ + M+LPPCH L+QFY+ GKLSC L QRSGD Sbjct: 125 DSRRHILNAWNVSFLPDESKSPEQNALEGRMSLPPCHILYQFYIAEGKLSCMLTQRSGDW 184 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 FLGIP+N AS + LT M+A +G Q GE +H++GD HLY NH EQA LQL+R+PR LP++ Sbjct: 185 FLGIPYNCASVAFLTHMIAQQLGLQPGEIVHSIGDAHLYLNHVEQARLQLTRTPRPLPRL 244 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 II L +R+EDF + Y+PH I A ++V Sbjct: 245 IIKREPDTLFDYRFEDFEIAGYDPHPHIAAPIAV 278 >gi|238852637|ref|ZP_04643047.1| thymidylate synthase [Lactobacillus gasseri 202-4] gi|238834783|gb|EEQ27010.1| thymidylate synthase [Lactobacillus gasseri 202-4] Length = 318 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V + + ELLW Sbjct: 6 QPYLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W +G IDQI +++ ++ PYSRR IVS Sbjct: 126 KFDERILADQDFAVKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHTLGD H+Y NHF+Q L+R P P++ +NP+ + F D L Sbjct: 246 TGLKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YKHHGTIKAPVAV 318 >gi|116629487|ref|YP_814659.1| thymidylate synthase [Lactobacillus gasseri ATCC 33323] gi|311110868|ref|ZP_07712265.1| thymidylate synthase [Lactobacillus gasseri MV-22] gi|122273575|sp|Q044A1|TYSY_LACGA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116095069|gb|ABJ60221.1| thymidylate synthase [Lactobacillus gasseri ATCC 33323] gi|311066022|gb|EFQ46362.1| thymidylate synthase [Lactobacillus gasseri MV-22] Length = 318 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V + + ELLW Sbjct: 6 QPYLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W +G IDQI +++ ++ PYSRR IVS Sbjct: 126 KFDERILADRDFAVKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHTLGD H+Y NHF+Q L+R P P++ +NP+ + F D L Sbjct: 246 TGLKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YKHHGTIKAPVAV 318 >gi|156552231|ref|XP_001606421.1| PREDICTED: similar to ENSANGP00000013700 [Nasonia vitripennis] Length = 313 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 128/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+ +I G+ + DRTGVGT FG QMRF L G FPLLTTK V W++VV ELL Sbjct: 30 YQYLKLIERIIAKGAVKTDRTGVGTHFIFGTQMRFSLRDGIFPLLTTKNVLWRAVVEELL 89 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +N L GV IW+ + ++G+LGP+YG QWR + Sbjct: 90 WFIKGSTNAKELADKGVKIWNANSSREFLDSCGFTDREEGDLGPVYGFQWRHFGAKYVNM 149 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+ ++ ++ P RR I+ AWN I MALPPCH L QF V +G+LS Sbjct: 150 HTDYTGQGVDQLQDVINKIKNKPDDRRIIMCAWNPVDIPIMALPPCHALVQFCVADGELS 209 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASYSLLT M+A + + G+F+HT+GD H+Y NH Q+ Sbjct: 210 CQLYQRSADMGLGVPFNIASYSLLTCMIAHITNLKPGDFVHTMGDCHVYRNHVPALKEQI 269 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +R P+ P + I + ++ F+ DF L +Y+PHA I ++V Sbjct: 270 ARKPKPFPTLKITRKVENIDDFKSTDFELNNYKPHAKIYMPMAV 313 >gi|311112042|ref|YP_003983264.1| thymidylate synthase [Rothia dentocariosa ATCC 17931] gi|310943536|gb|ADP39830.1| thymidylate synthase [Rothia dentocariosa ATCC 17931] Length = 302 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 151/285 (52%), Positives = 190/285 (66%), Gaps = 24/285 (8%) Query: 4 YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 Y DLLR ++ D R DRTG GT FG QMRFDL FPL+TTK+VH+KSV Sbjct: 18 YEDLLREILDENRDAIAADAQRADRTGTGTFGVFGRQMRFDLRDSFPLITTKRVHFKSVA 77 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 ELLWFLRG SN+ +L GV+IWDEWAD++G+LGP+YGVQWRSWP DG IDQI+ ++ Sbjct: 78 VELLWFLRGSSNIRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 137 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVF 171 +SL+ +P SRRHIVSAWN A +D+MALPPCH +FQFYV +LSCQLYQRS D+F Sbjct: 138 ESLKTNPSSRRHIVSAWNPAEVDEMALPPCHAMFQFYVHERPDGVKELSCQLYQRSADMF 197 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SRSPR---- 225 LG+PFNIASY+LLT ++A +G + GEFI T GD H+Y+NH EQ QL P Sbjct: 198 LGVPFNIASYALLTYLIAHEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGNDPEGNPY 257 Query: 226 ------TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+++I + + YEDF L Y+ H I A ++V Sbjct: 258 PPREPYPYPKLVIKTKKPSVFDYEYEDFELVDYKHHPGISAPIAV 302 >gi|225458199|ref|XP_002281129.1| PREDICTED: similar to Bifunctional dihydrofolate reductase-thymidylate synthase [Vitis vinifera] Length = 580 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 129/281 (45%), Positives = 169/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +I G+ + D+TG GT S FG QMRF+L FPLLTTK+V W+ VV ELLWF+ Sbjct: 300 YLRQLKEIISSGAHKADKTGTGTVSKFGCQMRFNLRLSFPLLTTKRVFWRGVVEELLWFI 359 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G +N L + + IWD A ++G+LGPIYG QWR + D Sbjct: 360 SGSTNAKVLQKKDIHIWDGNASREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTNMHAD 419 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ P RR I+S+WN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 420 YMGKGFDQLLDVIDKIKNKPDDRRIILSSWNPSDLKLMALPPCHMFAQFYVANGELSCQM 479 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT M+A V G G+FI +GD H+Y H + QL + Sbjct: 480 YQRSADMGLGVPFNIASYALLTCMIAHVCGILPGDFILIIGDAHIYKTHIRPLEEQLQKL 539 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP D+ SF DF L Y PH I K+SV Sbjct: 540 PKPFPILKINPQKKDIESFVAADFELIGYNPHQKIEMKMSV 580 >gi|237835909|ref|XP_002367252.1| bifunctional dihydrofolate reductase / thymidylate synthase [Toxoplasma gondii ME49] gi|729370|sp|Q07422|DRTS_TOXGO RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|295357|gb|AAB00163.1| dihydrofolate reductase-thymidylate synthase [Toxoplasma gondii] gi|211964916|gb|EEB00112.1| bifunctional dihydrofolate reductase / thymidylate synthase [Toxoplasma gondii ME49] gi|221484873|gb|EEE23163.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Toxoplasma gondii GT1] gi|221506073|gb|EEE31708.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Toxoplasma gondii VEG] Length = 610 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 134/285 (47%), Positives = 178/285 (62%), Gaps = 23/285 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL+ +I G DRTGVG S FG MR+ L + FPLLTTK+V WK V+ ELLWF Sbjct: 326 QYLDLIADIINNGRTMDDRTGVGVISKFGCTMRYSLDQAFPLLTTKRVFWKGVLEELLWF 385 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 +RGD+N ++L GV IWD+ ++ G++GP YG QWR + Sbjct: 386 IRGDTNANHLSEKGVKIWDKNVTREFLDSRNLPHREVGDIGPGYGFQWRHFGAAYKDMHT 445 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ+ +++Q LR +P RR +++AWN A +D+MALPPCH L QFYV++ K LSC Sbjct: 446 DYTGQGVDQLKNVIQMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVNDQKELSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS DV LG+PFNIASYSLLT+M+A V + EFIH +G+ H+Y NH E QL Sbjct: 506 IMYQRSCDVGLGVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYTNHVEALKEQLR 565 Query: 222 RSPRTLPQMII--NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I I ++ F EDF + Y PH I +++V Sbjct: 566 REPRPFPIVNILNKERIKEIDDFTAEDFEVVGYVPHGRIQMEMAV 610 >gi|119503469|ref|ZP_01625552.1| Thymidylate synthase [marine gamma proteobacterium HTCC2080] gi|119460531|gb|EAW41623.1| Thymidylate synthase [marine gamma proteobacterium HTCC2080] Length = 277 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 143/277 (51%), Positives = 182/277 (65%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLLR + G+ R DRTG GTRS FG Q+RFDL GFPLLTTKKVH+KSV +EL+ Sbjct: 1 MRAYLDLLRDIRDHGAVRTDRTGTGTRSLFGRQLRFDLKDGFPLLTTKKVHFKSVANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N ++L HGVSIWDEWA + G+LGP+YG QWR WP DG IDQ++ ++ L+ Sbjct: 61 WFLKGDTNTAWLKEHGVSIWDEWATEQGDLGPLYGAQWRRWPTQDGREIDQLAYVLDCLK 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR + WNV + MALPPCH L+QFYV +GKLS L+ RS Sbjct: 121 NRPDSRRILFHGWNVEYLPDETLSPQENVRAGRMALPPCHLLYQFYVVDGKLSTLLFIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D FLG+PFNIAS +LLT MLA G E + ++GD H+Y+NH +Q ++QL+RSP Sbjct: 181 SDTFLGLPFNIASVALLTHMLAQQSGLGVSEVVVSIGDAHIYSNHVDQVEVQLARSPAPP 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + + L + YEDF L Y P A I A V++ Sbjct: 241 PTLKLLRQPDSLFDYCYEDFALEGYSPQAHISAPVAI 277 >gi|254281872|ref|ZP_04956840.1| thymidylate synthase [gamma proteobacterium NOR51-B] gi|219678075|gb|EED34424.1| thymidylate synthase [gamma proteobacterium NOR51-B] Length = 277 Score = 344 bits (884), Expect = 5e-93, Method: Composition-based stats. Identities = 147/277 (53%), Positives = 183/277 (66%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+LLR + G DR DRTG GTRS FG Q+RFDL +GFPLLTTKK+H+KSVV+EL+ Sbjct: 1 MRAYLELLRDIRDHGVDRGDRTGTGTRSVFGRQLRFDLREGFPLLTTKKIHFKSVVNELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N +L +GVSIWDEWA +DG+LGP+YG QW +WP DG I+QI ++ LR Sbjct: 61 WFLSGDTNTRWLKENGVSIWDEWATEDGDLGPLYGAQWHAWPTRDGGSINQIDYVLDCLR 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 P SRR + AWNV + MALPPCH L+QFYV NG LS QLY RS Sbjct: 121 NRPESRRILFHAWNVEYLPDESMTPQDNVAAGRMALPPCHLLYQFYVANGALSAQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+PFNIAS +LLT MLA E I +LGD H+Y+NH Q + QL+R P + Sbjct: 181 SDVFLGLPFNIASLALLTHMLAQQADLSVAEVIVSLGDAHIYSNHQRQVETQLAREPGSA 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + I + +R+EDF+L Y+P I A V+V Sbjct: 241 PTLAIGRRPDTIYDYRFEDFSLHDYDPQPPIPAPVAV 277 >gi|194467928|ref|ZP_03073914.1| Thymidylate synthase [Lactobacillus reuteri 100-23] gi|194452781|gb|EDX41679.1| Thymidylate synthase [Lactobacillus reuteri 100-23] Length = 320 Score = 344 bits (884), Expect = 6e-93, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 188/313 (60%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL+R+V+ G + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV + + ELLW Sbjct: 8 EQYLDLIRYVLANGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIRFLLQHKNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W G+ IDQI++++Q ++ P SRR IVS Sbjct: 128 SFCQRILDDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NH +Q QL+R+P P++I+ + + D L Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307 Query: 252 YEPHAAILAKVSV 264 Y +AI A V+V Sbjct: 308 YTHESAIKAPVAV 320 >gi|227529200|ref|ZP_03959249.1| thymidylate synthase [Lactobacillus vaginalis ATCC 49540] gi|227350875|gb|EEJ41166.1| thymidylate synthase [Lactobacillus vaginalis ATCC 49540] Length = 320 Score = 344 bits (884), Expect = 6e-93, Method: Composition-based stats. Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL L ++V+ G + DRTG GT+S FGYQMRF+L +GFPLLTTKKV + + ELLW Sbjct: 8 QQYLSLAQYVLDHGHTKSDRTGTGTKSVFGYQMRFNLEEGFPLLTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIQFLLKHKNHIWDEWAFKKWVESDEYHGPDMTDFGHRWLKDPEFKKAYLKEKR 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W +G IDQI++++ ++ P SRR IVS Sbjct: 128 DFCERIVNDDEFAKKYGDLGLVYGSQWRHWKTSNGQTIDQIANVIDQIKTTPDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDISSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q G+F+HTLGD H+Y NH Q QLSR+P P++I+ + + D L Sbjct: 248 CGLQVGDFVHTLGDAHIYLNHLSQIKEQLSRTPHKAPKLILPDEPKPIDEYEMSDIKLEG 307 Query: 252 YEPHAAILAKVSV 264 Y AI A V+V Sbjct: 308 YTHEPAIKAPVAV 320 >gi|240848723|ref|NP_001155666.1| thymidylate synthase-like [Acyrthosiphon pisum] gi|239790855|dbj|BAH71962.1| ACYPI006453 [Acyrthosiphon pisum] Length = 299 Score = 344 bits (884), Expect = 6e-93, Method: Composition-based stats. Identities = 131/284 (46%), Positives = 180/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLD ++ +++ G + DRT VGT S FG QMR++L G FPLLTTK+V W+ VV ELL Sbjct: 16 QQYLDHIKKILEKGHKKMDRTRVGTLSLFGIQMRYNLMDGVFPLLTTKRVFWRGVVEELL 75 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +N L V +WD + ++G+LGP+YG QWR + Sbjct: 76 WFIKGSTNSKELSEKDVKVWDANSTRSYLDSIGLTDREEGDLGPVYGFQWRHYGAEYVDV 135 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+ +++ +++ +P RR ++ AWN + KMALPPCHCL QF+V +G LS Sbjct: 136 HTDYSGKGIDQLQNVINTIKTNPDDRRMLMIAWNPCDVPKMALPPCHCLVQFFVADGYLS 195 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH + +QL Sbjct: 196 CQMYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHIYLNHVDALKIQL 255 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + IN + + F + DFTL Y P+ I ++V Sbjct: 256 QRKPKQFPTLTINREVKSIDDFNFSDFTLSGYVPYPKISMDMAV 299 >gi|301066434|ref|YP_003788457.1| thymidylate synthase [Lactobacillus casei str. Zhang] gi|300438841|gb|ADK18607.1| Thymidylate synthase [Lactobacillus casei str. Zhang] Length = 316 Score = 344 bits (884), Expect = 6e-93, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 189/313 (60%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLS+GFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSEGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 64 FLRGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q G+FIHT GD HLY NH +Q QL+R+PR P +++NP+ D+ F +D L + Sbjct: 244 CGLQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|136612|sp|P00469|TYSY_LACCA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157831773|pdb|1LCA|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And Cb3717 gi|157831774|pdb|1LCB|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dtmp And H2folate gi|157831775|pdb|1LCE|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And Ch2thf gi|157832141|pdb|1NJE|A Chain A, Thymidylate Synthase With 2'-Deoxycytidine 5'-Monophosphate (Dcmp) gi|157833951|pdb|1THY|A Chain A, Refined Structures Of Substrate-Bound And Phosphate-Bound Thymidylate Synthase From Lactobacillus Casei gi|157834017|pdb|1TSL|A Chain A, L. Casei Thymidylate Synthase With Species Specific Inhibitor gi|157834018|pdb|1TSM|A Chain A, L. Casei Thymidylate Synthase With Species Specific Inhibitor gi|157836379|pdb|2TDM|A Chain A, Structure Of Thymidylate Synthase gi|157837001|pdb|4TMS|A Chain A, Plastic Adaptation Toward Mutations In Proteins: Structural Comparison Of Thymidylate Synthases gi|218681751|pdb|3BNZ|A Chain A, Crystal Structure Of Thymidylate Synthase Ternary Complex With Dump And 8a Inhibitor gi|221046605|pdb|3BYX|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And The Phtalimidic Derivative C00 In Multiple Binding Modes gi|221046606|pdb|3BZ0|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And The Phtalimidic Derivative C00 gi|221046647|pdb|3C06|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And The Phtalimidic Derivative 14c In Multiple Binding Modes-Mode 1 gi|221046648|pdb|3C0A|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And The Phtalimidic Derivative 14c In Multiple Binding Modes-Mode 2 gi|302566074|pdb|3IJZ|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And Pthalimidic Derivative 15c gi|302566075|pdb|3IK0|A Chain A, Lactobacillus Casei Thymidylate Synthase In Ternary Complex With Dump And The Phtalimidic Derivative 7c1 gi|302566076|pdb|3IK1|A Chain A, Lactobacillus Casei Thymidylate Synthase In Ternary Complex With Dump And The Phtalimidic Derivative 20c gi|208731|gb|AAA72795.1| thymidylate synthase (EC 2.1.1.45) [synthetic construct] Length = 316 Score = 344 bits (883), Expect = 7e-93, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|239631533|ref|ZP_04674564.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525998|gb|EEQ64999.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 316 Score = 344 bits (883), Expect = 7e-93, Method: Composition-based stats. Identities = 148/313 (47%), Positives = 190/313 (60%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKVH+ + ELLW Sbjct: 4 QPYLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVHFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 64 FLRGDTNIRFLLQHKNHIWDEWAFEKWVTSPDYHGPDMTDFGHRSQKDPEFAASYREQMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q G+FIHT GD HLY NH +Q QL+R+PR P +++NP+ D+ F +D L + Sbjct: 244 CGLQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|241896672|ref|ZP_04783968.1| thymidylate synthase [Weissella paramesenteroides ATCC 33313] gi|241870153|gb|EER73904.1| thymidylate synthase [Weissella paramesenteroides ATCC 33313] Length = 318 Score = 344 bits (883), Expect = 7e-93, Method: Composition-based stats. Identities = 142/311 (45%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL + ++ G+ + DRTG GTRS FG Q+RFD+S+GFPLLTTK+V + + ELLWFL Sbjct: 8 YLDLAQDILDNGAVKGDRTGTGTRSVFGRQLRFDMSEGFPLLTTKRVPFGLIKSELLWFL 67 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 RGD+N+ +L H IWDEWA K+ Sbjct: 68 RGDTNIKFLLEHKNHIWDEWAFKNWIESAEYDGPDMTDFGRRSLVDDAFKAQYDEQHAIF 127 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 GELG +YG QWR W G IDQI ++ ++ +P SRR IV+AW Sbjct: 128 VDRILNDDEFAQKYGELGDVYGAQWRHWRRVQGGFIDQIKDVIDQIKTNPNSRRLIVTAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + ALPPCH LFQFYV +GKLS QLYQRS DVFLG+PFNIASYSLL M+A+ G Sbjct: 188 NPEDVPTQALPPCHTLFQFYVADGKLSLQLYQRSADVFLGVPFNIASYSLLLHMVAAQTG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + G+F+HT GD H+Y+NH EQ QL R R LP + +NP++ D+ + D + +Y Sbjct: 248 LEPGKFVHTFGDTHIYSNHIEQVTEQLQREMRELPTITLNPDVKDIAEYTMADIKINNYN 307 Query: 254 PHAAILAKVSV 264 PHA+I A V+V Sbjct: 308 PHASIKAPVAV 318 >gi|116494873|ref|YP_806607.1| thymidylate synthase [Lactobacillus casei ATCC 334] gi|122263709|sp|Q039F7|TYSY_LACC3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116105023|gb|ABJ70165.1| thymidylate synthase [Lactobacillus casei ATCC 334] Length = 316 Score = 344 bits (883), Expect = 8e-93, Method: Composition-based stats. Identities = 147/313 (46%), Positives = 189/313 (60%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 64 FLRGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q G+FIHT GD HLY NH +Q QL+R+PR P +++NP+ D+ F +D L + Sbjct: 244 CGLQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|282850793|ref|ZP_06260167.1| thymidylate synthase [Lactobacillus gasseri 224-1] gi|282557745|gb|EFB63333.1| thymidylate synthase [Lactobacillus gasseri 224-1] Length = 318 Score = 344 bits (883), Expect = 8e-93, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 181/313 (57%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V + + ELLW Sbjct: 6 QPYLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +Y QWR W +G IDQI +++ ++ PYSRR IVS Sbjct: 126 KFDERILADRDFAVKFGNLGDVYAAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHTLGD H+Y NHF+Q L+R P P++ +NP+ + F D L Sbjct: 246 TGLKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YKHHGTIKAPVAV 318 >gi|219682346|ref|YP_002468730.1| thymidylate synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254790233|sp|B8D7X0|TYSY_BUCAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219622079|gb|ACL30235.1| thymidylate synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086743|gb|ADP66824.1| thymidylate synthase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087836|gb|ADP67915.1| thymidylate synthase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 264 Score = 344 bits (883), Expect = 8e-93, Method: Composition-based stats. Identities = 145/264 (54%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H S+++ELL Sbjct: 1 MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W +G+ IDQI +++ L+ Sbjct: 61 WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV IDKM LPPCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YS+L M+A + G+F+ T GDVHLYNNH E A Q+ R PRTLP++ I L Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y P+ AI ++S+ Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264 >gi|327183411|gb|AEA31858.1| thymidylate synthase [Lactobacillus amylovorus GRL 1118] Length = 318 Score = 344 bits (883), Expect = 8e-93, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 6 QPYLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W DG IDQI ++++ ++ P SRR IV+ Sbjct: 126 KFDQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL M+A Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q LSR P PQ+ +NP + F+ +D + Sbjct: 246 TGLEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YKHHGTIKAPVAV 318 >gi|219681791|ref|YP_002468177.1| thymidylate synthase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471493|ref|ZP_05635492.1| thymidylate synthase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254790232|sp|B8D9L8|TYSY_BUCA5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219624634|gb|ACL30789.1| thymidylate synthase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 264 Score = 344 bits (883), Expect = 8e-93, Method: Composition-based stats. Identities = 146/264 (55%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H S+++ELL Sbjct: 1 MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W +G+ IDQI +++ L+ Sbjct: 61 WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV IDKM LPPCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YS+L M+A + G+F+ T GDVHLYNNH E A Q+ R PRTLP++ I L Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y P+ AI K+S+ Sbjct: 241 QYCFEDFKIIGYHPYPAIKGKISI 264 >gi|191638380|ref|YP_001987546.1| thymidylate synthase [Lactobacillus casei BL23] gi|190712682|emb|CAQ66688.1| Thymidylate synthase (TS) (TSase) [Lactobacillus casei BL23] gi|327382408|gb|AEA53884.1| Thymidylate synthase [Lactobacillus casei LC2W] gi|327385609|gb|AEA57083.1| Thymidylate synthase [Lactobacillus casei BD-II] Length = 316 Score = 344 bits (882), Expect = 9e-93, Method: Composition-based stats. Identities = 147/313 (46%), Positives = 189/313 (60%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVRFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 64 FLRGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q G+FIHT GD HLY NH +Q QL+R+PR P +++NP+ D+ F +D L + Sbjct: 244 CGLQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|195446571|ref|XP_002070828.1| GK18710 [Drosophila willistoni] gi|194166913|gb|EDW81814.1| GK18710 [Drosophila willistoni] Length = 354 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 128/281 (45%), Positives = 179/281 (63%), Gaps = 22/281 (7%) Query: 6 DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRG 65 DLLR +I+ G R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V ELLWF++G Sbjct: 74 DLLRSIIERGETRIDRTRVGTLSIFGSQMRFDMRESFPLLTTKRVFFRAVAEELLWFIKG 133 Query: 66 DSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------DYD 105 ++ L V IWD + ++ G+LGP+YG QWR + DY Sbjct: 134 KTDAKILQDKNVHIWDGNSTREFLDNLGFTDRAVGDLGPVYGFQWRHFGAEYRTCQDDYT 193 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKLSCQL 163 G +DQ+ ++++++ +P RR I+SAWN + KMALPPCHCL QFYV +LSCQL Sbjct: 194 GQGVDQLRQVIETIKTNPSDRRIIMSAWNPLDLPKMALPPCHCLAQFYVSQSRNELSCQL 253 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y +H E QL R+ Sbjct: 254 YQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLSHVEPIKEQLKRT 313 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ + D+ F YED + +Y P+ I +++V Sbjct: 314 PRPFPKLAFKRQVTDIEDFTYEDIEIVNYNPYPKIQMEMAV 354 >gi|195398227|ref|XP_002057724.1| GJ18288 [Drosophila virilis] gi|194141378|gb|EDW57797.1| GJ18288 [Drosophila virilis] Length = 348 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 135/285 (47%), Positives = 178/285 (62%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL + +IK G R DRT VGT S FG QMRFDL K FPLLTTK+V ++ V ELLW Sbjct: 64 KQYLLFIERIIKNGDKRVDRTRVGTLSIFGAQMRFDLRKSFPLLTTKRVFFRGVAEELLW 123 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G ++ L V IWD + ++ G+LGP+YG QWR + Sbjct: 124 FIAGKTDAKILQAKKVHIWDANSTREFLDNCGHTDRAVGDLGPVYGFQWRHFGAEYRTCD 183 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159 DY G +DQ+ ++ ++R +P RR I+SAWN I KMALPPCHCL QF+V G+L Sbjct: 184 DDYTGQGVDQLQQVIHTIRTNPSDRRIIMSAWNPMDIPKMALPPCHCLVQFFVSQSKGEL 243 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 SCQLYQRS D+ LG+PFNIASY+LLT ++A V G + GEFIHT+GD H+Y NH E Q Sbjct: 244 SCQLYQRSADMGLGVPFNIASYALLTYLIAHVTGLKPGEFIHTIGDAHVYLNHIEPLQQQ 303 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + RSP+ P++ I + ++ F YEDF + Y P AI +++V Sbjct: 304 IKRSPKPFPKLNIKRQVTNIEDFCYEDFEIVGYNPDKAIPMEMAV 348 >gi|311087331|gb|ADP67411.1| thymidylate synthase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 264 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 145/264 (54%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H S+++ELL Sbjct: 1 MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W +G+ IDQI +++ L+ Sbjct: 61 WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTLEGHEIDQIKNVLIQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV IDKM LPPCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YS+L M+A + G+F+ T GDVHLYNNH E A Q+ R PRTLP++ I L Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y P+ AI ++S+ Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264 >gi|15617039|ref|NP_240252.1| thymidylate synthase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11387178|sp|P57515|TYSY_BUCAI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|25285999|pir||B84981 thymidylate synthase (EC 2.1.1.45) [imported] - Buchnera sp. (strain APS) gi|10039104|dbj|BAB13138.1| thymidylate synthase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 264 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 146/264 (55%), Positives = 195/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H S+++ELL Sbjct: 1 MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+SYL+ + +SIW+ WA++ G++GPIYG QWR+W +G+ IDQI +++ L+ Sbjct: 61 WFLKGDTNISYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV IDKM LPPCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YS+L M+A + G+F+ T GDVHLYNNH E A Q+ R PRTLP++ I L Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y P+ AI ++S+ Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264 >gi|157832139|pdb|1NJC|A Chain A, Thymidylate Synthase, Mutation, N229d With 2'-Deoxycytidine 5'-Monophosphate (Dcmp) gi|157832140|pdb|1NJD|A Chain A, Thymidylate Synthase, Mutation, N229d With 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 316 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF+IASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFDIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|259046573|ref|ZP_05736974.1| thymidylate synthase [Granulicatella adiacens ATCC 49175] gi|259036738|gb|EEW37993.1| thymidylate synthase [Granulicatella adiacens ATCC 49175] Length = 315 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 141/313 (45%), Positives = 178/313 (56%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY +LL +++ G+ + DRTG GT+S FGYQMRFDL KGFPLLTTK+V + + ELLW Sbjct: 3 KQYKELLTKILEEGTTKTDRTGTGTKSIFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLW 62 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ YL H IWDEWA Sbjct: 63 FLHGDTNIKYLLEHNNHIWDEWAFERYVSSPKYTGPDMTDFGRRCLQDEAFNEVYQEVKK 122 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + GELG IYG QWR W G IDQI ++ L+ P SRR IVS Sbjct: 123 DFCEKILSDDAFAAEFGELGNIYGSQWRHWKTSKGETIDQIEDLLNLLKNSPDSRRMIVS 182 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A+ Sbjct: 183 AWNPEDVPSMALPPCHTMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIANE 242 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 +G + GEF+HTLGD H+Y NH EQ QL+R LP +++ + D + Sbjct: 243 VGLEVGEFVHTLGDAHIYLNHMEQVKTQLAREEMALPTLVLKHPEKSMFDIDVTDVVVEG 302 Query: 252 YEPHAAILAKVSV 264 Y+ H I A ++V Sbjct: 303 YQSHPTIKAPIAV 315 >gi|315038135|ref|YP_004031703.1| thymidylate synthase [Lactobacillus amylovorus GRL 1112] gi|312276268|gb|ADQ58908.1| thymidylate synthase [Lactobacillus amylovorus GRL 1112] Length = 318 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 6 QPYLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFSLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W DG IDQI ++++ ++ P SRR IV+ Sbjct: 126 KFDQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL M+A Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q LSR P PQ+ +NP + F+ +D + Sbjct: 246 TGLEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YKHHGTIKAPVAV 318 >gi|47458869|ref|YP_015731.1| thymidylate synthase [Mycoplasma mobile 163K] gi|62901312|sp|Q6KIQ6|TYSY_MYCMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|47458197|gb|AAT27520.1| thymidylate synthase [Mycoplasma mobile 163K] Length = 288 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 148/293 (50%), Positives = 193/293 (65%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL+ +++ G + DRT GT S FG Q R+DLSKGFPL+TTKKVH KS++ ELL Sbjct: 1 MEQYLSLLKEILEKGQKKEDRTNTGTISYFGTQRRYDLSKGFPLVTTKKVHLKSIIFELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91 WF++GD+N+ YL +GV+IW+EW K GELG Sbjct: 61 WFIKGDTNIKYLVDNGVNIWNEWPYETFKKSKDFNGESLADFVLKIKSDTLFAKKYGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ N DQ+ +++++ +P SRR IVSAW I KMALPPCH FQ Sbjct: 121 PVYGKQWRNF-----NGTDQLFDAIETIKKNPDSRRIIVSAWAANEISKMALPPCHAFFQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV+N KLS QLYQRSGD FLG+PFNIASYS+L M+A + ++ GEFIHT+GD H+Y N Sbjct: 176 FYVNNNKLSLQLYQRSGDTFLGVPFNIASYSILLAMVAQITNYEVGEFIHTIGDTHIYLN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ + QLSR P LP++++N I ++ F+YED + YE H AI AKV+V Sbjct: 236 HLEQVEEQLSRKPLKLPKLVLNKKIKNIDDFKYEDIEIIDYESHPAIKAKVAV 288 >gi|261329761|emb|CBH12743.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei gambiense DAL972] Length = 527 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 131/284 (46%), Positives = 174/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ +I G + DRTGVGTRS FG QMRF L PLLTTK+V W+ V ELL Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102 WFLRG++N L G+ IWD + + +LGP+YG QWR + Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 D +G +DQI++IV+SL +P RR I +AWN A + +MALPPCH + QFYV NG+LS Sbjct: 364 KVDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT ++A G + GE +HTLGD H+Y+NH E QL Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ + L F+ D + Y P+ I +++V Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527 >gi|72391754|ref|XP_846171.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei TREU927] gi|62358404|gb|AAX78868.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei] gi|70802707|gb|AAZ12612.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 527 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 131/284 (46%), Positives = 174/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ +I G + DRTGVGTRS FG QMRF L PLLTTK+V W+ V ELL Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102 WFLRG++N L G+ IWD + + +LGP+YG QWR + Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 D +G +DQI++IV+SL +P RR I +AWN A + +MALPPCH + QFYV NG+LS Sbjct: 364 KEDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT ++A G + GE +HTLGD H+Y+NH E QL Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ + L F+ D + Y P+ I +++V Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527 >gi|157831561|pdb|1JMI|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase gi|157834041|pdb|1TVW|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase Length = 316 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF+IASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFSIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|2833337|sp|Q27783|DRTS_TRYBB RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|799175|gb|AAA91362.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei] Length = 527 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 131/284 (46%), Positives = 174/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ +I G + DRTGVGTRS FG QMRF L PLLTTK+V W+ V ELL Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102 WFLRG++N L G+ IWD + + +LGP+YG QWR + Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 D +G +DQI++IV+SL +P RR I +AWN A + +MALPPCH + QFYV NG+LS Sbjct: 364 KVDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT ++A G + GE +HTLGD H+Y+NH E QL Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ + L F+ D + Y P+ I +++V Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527 >gi|312869138|ref|ZP_07729312.1| thymidylate synthase [Lactobacillus oris PB013-T2-3] gi|311095384|gb|EFQ53654.1| thymidylate synthase [Lactobacillus oris PB013-T2-3] Length = 320 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 147/313 (46%), Positives = 188/313 (60%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL R+V++ G ++ DRTG GTRS FGYQMRFDL+KGFP+LTTKKV + + ELLW Sbjct: 8 QQYLDLARYVLENGHEKTDRTGTGTRSVFGYQMRFDLAKGFPILTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIRFLLQHHNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLVDEDFKKQYLAEKK 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W +G IDQI++++ ++ SRR IVS Sbjct: 128 AFCQRIIDDADFAKKYGDLGLVYGSQWRHWKTSNGETIDQIANVIHQIKTTSDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q G+F+HTLGD H+Y NH +Q QLSR+P P++I+ + + ED L Sbjct: 248 CGLQVGDFVHTLGDAHIYLNHLDQIKEQLSRTPHEAPRLILPAEPKLIDQYEMEDIKLEG 307 Query: 252 YEPHAAILAKVSV 264 Y AAI A V+V Sbjct: 308 YTHEAAIKAPVAV 320 >gi|238854701|ref|ZP_04645031.1| thymidylate synthase [Lactobacillus jensenii 269-3] gi|260663934|ref|ZP_05864787.1| thymidylate synthase [Lactobacillus jensenii SJ-7A-US] gi|282932908|ref|ZP_06338305.1| thymidylate synthase [Lactobacillus jensenii 208-1] gi|313472235|ref|ZP_07812727.1| thymidylate synthase [Lactobacillus jensenii 1153] gi|238832491|gb|EEQ24798.1| thymidylate synthase [Lactobacillus jensenii 269-3] gi|239529621|gb|EEQ68622.1| thymidylate synthase [Lactobacillus jensenii 1153] gi|260561820|gb|EEX27789.1| thymidylate synthase [Lactobacillus jensenii SJ-7A-US] gi|281302943|gb|EFA95148.1| thymidylate synthase [Lactobacillus jensenii 208-1] Length = 318 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+++++ G D+ DRTG GTRS FG QMRFDLS+GFPL+TTKKV + + ELLW Sbjct: 6 QPYLDLLKNIMETGHDKTDRTGTGTRSKFGAQMRFDLSQGFPLVTTKKVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L H IWDEWA Sbjct: 66 FLRGDTNIKFLLEHKNHIWDEWAFKNWVNSPEYQGPDMNDFGLRSQKDADFKKLYDEQMK 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR W G IDQI ++ L+ P SRR IVS Sbjct: 126 LFTERILSDEAFAEKYGNLGDVYGAQWRHWKKRSGGSIDQIQDVLNQLQTHPDSRRMIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV + KLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDVPTSALPPCHTLFQFYVADNKLSLQLYQRSGDMFLGVPFNIASYSLLLSLVARQ 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 GF+ GEF+HTLGD H+Y NHF+Q + QL+R P P++ +N ++ F ED + Sbjct: 246 TGFEVGEFVHTLGDAHIYKNHFDQVEKQLARDPFDSPKLWLNSAKKNISDFEMEDIKVLD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YKHHGVIKAPVAV 318 >gi|227535130|ref|ZP_03965179.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187175|gb|EEI67242.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 328 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 189/313 (60%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLS+GFPLLTTKKV + + ELLW Sbjct: 16 QPYLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSEGFPLLTTKKVPYGLIKSELLW 75 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 76 FLRGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMA 135 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 136 KFDERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVS 195 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 196 AWNPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 255 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q G+FIHT GD HLY NH +Q QL+R+PR P +++NP+ D+ F +D L + Sbjct: 256 CGLQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLN 315 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 316 YDPYPAIKAPVAV 328 >gi|325956588|ref|YP_004292000.1| thymidylate synthase [Lactobacillus acidophilus 30SC] gi|325333153|gb|ADZ07061.1| thymidylate synthase [Lactobacillus acidophilus 30SC] Length = 318 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 6 QPYLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W DG IDQI ++++ ++ P SRR IV+ Sbjct: 126 KFDQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL M+A Sbjct: 186 AWNPEDVSTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q LSR P PQ+ +NP + F+ +D + Sbjct: 246 TGLEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YKHHGTIKAPVAV 318 >gi|2625048|gb|AAC58691.1| thymidylate synthase homolog [rhesus monkey rhadinovirus H26-95] Length = 282 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL L +IK G R DRTGVGTRS FG Q R++L FPLLTTK+V W+ VV ELLWF Sbjct: 1 QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 60 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP-------- 102 +RG ++ + L R GV IWD + +G+LGP+YG QWR + Sbjct: 61 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 120 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y+G +DQ+ +V + P+ RR ++ AWN A + +MALPPCH L QFYV G+LSCQ Sbjct: 121 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 180 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRS D+ LG+PFNIASY+LLT ++A V G G+F+HTLGD H+YNNH + LQL R Sbjct: 181 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 240 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +PR P++ I + L F D +L Y+PH I +++V Sbjct: 241 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 282 >gi|332686569|ref|YP_004456343.1| thymidylate synthase [Melissococcus plutonius ATCC 35311] gi|332370578|dbj|BAK21534.1| thymidylate synthase [Melissococcus plutonius ATCC 35311] Length = 315 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L R ++ G + DRTG GT S FGYQMRF+LS GFPLLTTK+V + + ELLWFL Sbjct: 5 YLALGREILTNGEAKEDRTGTGTLSIFGYQMRFNLSTGFPLLTTKRVPFGLIKSELLWFL 64 Query: 64 RGDSNVSYLHRHGVSIWDEWADK------------------------------------- 86 +GD+N+ +L + IWDEWA + Sbjct: 65 KGDTNIRFLLENNNHIWDEWAFERYTKSPDYIGPDMTNFGQRVLTDSKFSEIYQEQHQLF 124 Query: 87 -------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 GELG IYG QWR W G IDQ++ +++ ++ P SRR IVSAW Sbjct: 125 CNKILTDDEFAQQYGELGNIYGAQWRRWQTKSGKFIDQLTQVIEMIKKTPDSRRLIVSAW 184 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I MALPPCH LFQFYV + KLSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 185 NPEEIPSMALPPCHTLFQFYVSHNKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GDVHLY NH +Q + QL+R P+ LP +++N + F D + +Y+ Sbjct: 245 LEVGEFVHTFGDVHLYKNHIDQMNEQLTRKPKQLPTLVLNTTKTSIFDFDMADIKVENYQ 304 Query: 254 PHAAILAKVSV 264 P+ AI A ++V Sbjct: 305 PYPAIKAPIAV 315 >gi|15384270|gb|AAK96220.1|AF406808_1 thymidylate synthase [Trichinella spiralis] gi|13096100|gb|AAF80470.2| thymidylate synthase [Trichinella spiralis] gi|316977369|gb|EFV60479.1| thymidylate synthase [Trichinella spiralis] Length = 307 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 128/282 (45%), Positives = 178/282 (63%), Gaps = 21/282 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL+ L+ +I G + DRTG+GT STFG Q R+ L FPLLTTK+V W+ VV ELLWF Sbjct: 26 YLNQLKDIIDHGVRKNDRTGIGTLSTFGTQSRYCLRDDIFPLLTTKRVFWRGVVEELLWF 85 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102 + G +N L V+IWD + ++G+LGP+YG QWR + Sbjct: 86 ISGSTNAKQLSEKNVNIWDGNSSREFLDSRGLYNYEEGDLGPVYGFQWRHFGCPYSSMTA 145 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G DQ+ ++ +R +P SRR I++AWN ++K+ALPPCHC QFYV +G+LSCQ Sbjct: 146 DYKGKGYDQLQQCIKMIREEPESRRIIMTAWNPCDLEKVALPPCHCFVQFYVADGELSCQ 205 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS D+ LG+PFNIASYSLLT M+A + + G FIHT+GD H+Y H + +Q+ R Sbjct: 206 MYQRSADMGLGVPFNIASYSLLTRMIAHITSLKPGFFIHTIGDAHVYLTHVDALKVQMER 265 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I N+ ++ FR EDF L +Y+P+ I ++V Sbjct: 266 KPRPFPKLKILRNVENIDDFRAEDFELINYKPYPKISMPMAV 307 >gi|311086170|gb|ADP66252.1| thymidylate synthase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 264 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 145/264 (54%), Positives = 194/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H S+++ELL Sbjct: 1 MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N +YL+ + +SIW+ WA++ G++GPIYG QWR+W +G+ IDQI +++ L+ Sbjct: 61 WFLKGDTNTAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV IDKM LPPCH LFQFYV N LSCQLYQRS DVFLG+PFNIAS Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YS+L M+A + G+F+ T GDVHLYNNH E A Q+ R PRTLP++ I L Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 + +EDF + Y P+ AI ++S+ Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264 >gi|293364092|ref|ZP_06610828.1| thymidylate synthase [Mycoplasma alligatoris A21JP2] gi|292552582|gb|EFF41356.1| thymidylate synthase [Mycoplasma alligatoris A21JP2] Length = 289 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 153/294 (52%), Positives = 198/294 (67%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++ V+ G RRDRTGVGT FG Q R+DL KGFPLLTTKK+ WK++V ELL Sbjct: 1 MKQYLKLIKTVLNEGMVRRDRTGVGTIGIFGTQTRYDLRKGFPLLTTKKMAWKAIVIELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91 WFL+GD+N+ YL + V+IW+EW K G+LG Sbjct: 61 WFLKGDTNIKYLVDNNVNIWNEWPYEKFKKSSDFKNETLEQFIQKIKTDDDFAQKHGDLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + N +DQI+ I+Q L+ P+SRR IV+AWN AL+D+MALPPCH LFQ Sbjct: 121 PVYGKQWRDF-----NGVDQITKIIQELKEKPFSRRMIVNAWNPALVDQMALPPCHALFQ 175 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FYV N +LS QLYQRSGD+FLG+PFNIASYSLL M+A V G + GEF+HT+GD H+Y+ Sbjct: 176 FYVSSNDELSLQLYQRSGDLFLGVPFNIASYSLLLHMVAQVTGLRVGEFVHTIGDAHIYS 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH+EQ + QL+R P LP + +N I ++ F+YED + Y+ HA I A+V+V Sbjct: 236 NHYEQVNEQLARRPFKLPTLSLNKEIKNIFDFKYEDIKIEDYKSHAKIKAEVAV 289 >gi|157834186|pdb|1VZB|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Binary Complex With Dump gi|157834187|pdb|1VZC|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Binary Complex With Fdump gi|157834188|pdb|1VZD|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Ternary Complex With Fdump And Cb3717 gi|157834189|pdb|1VZE|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Ternary Complex With Dump And Cb3717 Length = 316 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + +LLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSQLLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKAPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|323466728|gb|ADX70415.1| Thymidylate synthase [Lactobacillus helveticus H10] Length = 318 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 144/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTG GTRS FG QMRFDLS+GFPLLTTKKV + + ELLW Sbjct: 6 QPYLDLLQKIMSEGHDKDDRTGTGTRSYFGAQMRFDLSQGFPLLTTKKVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVNSSEYQGPDMTDFGLRSQSDPEFNKIYQAEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W +G IDQI+ +++ ++ P SRR IV+ Sbjct: 126 KFDQRILDDEDFAKKYGNLGDVYGAQWRHWEKREGGFIDQIADVIKQIKETPDSRRMIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNLIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q GEFIHTLGD H+Y NH +Q + LSR P PQ+ +NP ++ F +D + Sbjct: 246 TGLQVGEFIHTLGDAHIYRNHLKQVEELLSRKPYDSPQLWLNPEKKNIADFEMKDIKVVD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YQHHGTIKAPVAV 318 >gi|307195505|gb|EFN77391.1| Thymidylate synthase [Harpegnathos saltator] Length = 302 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 135/284 (47%), Positives = 178/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+ VIK G+ + +RTGV T S FG Q+RF L G FPLLTTK+V WK+VV ELL Sbjct: 19 YQYLRLIEKVIKSGTRKGNRTGVDTYSIFGTQLRFGLRDGVFPLLTTKRVFWKAVVEELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +N L G+ IWD+ ++G+LGP+YG QWR + Sbjct: 79 WFIKGSTNSKELADKGIHIWDKNGSRAFLDSCGFSDREEGDLGPVYGFQWRHYGAEYKDM 138 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+ ++ ++ P RR I+SAWN I KMALPPCH QFYV NG+LS Sbjct: 139 HTDYAGQGIDQLKEVIHKIKHSPDDRRIIMSAWNPTDIPKMALPPCHNFIQFYVSNGELS 198 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 QLYQRS D+ LG+PFNIASYSLL ++A V G + GEF+HT+GD H+Y NH + Q+ Sbjct: 199 AQLYQRSADMGLGVPFNIASYSLLIYIIAHVTGLKPGEFVHTMGDCHVYINHVSALEEQI 258 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I I D+ F EDF L Y PH+ + +++V Sbjct: 259 QRKPRNFPKLKIIREIKDIDDFVAEDFELIDYNPHSKLYMEMAV 302 >gi|157834185|pdb|1VZA|A Chain A, Thymidylate Synthase E60d Mutant Binary Complex With 2'- Deoxyuridine 5'-Monophosphate (Dump) Length = 316 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + +LLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSDLLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKAPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|307166222|gb|EFN60452.1| Thymidylate synthase [Camponotus floridanus] Length = 298 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 135/284 (47%), Positives = 179/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+ VI+ G+ R +RTGV T S FG Q+RF L G FPLLTTK+V W++VV ELL Sbjct: 15 YQYLRLVEKVIRTGAKRNNRTGVDTYSIFGTQIRFSLRDGVFPLLTTKRVFWRAVVEELL 74 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +N L GV IWDE ++G+LGP+YG QWR + Sbjct: 75 WFIKGSTNSKELSDKGVHIWDENGSRAFLDSCGFTDREEGDLGPVYGFQWRHFGAEYKDI 134 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+ ++ ++ P RR I+S WN I +MALPPCH L QFYV+NG+LS Sbjct: 135 RTDYTGQGIDQLKEVIHKIKHCPDDRRIIMSNWNPVDIPEMALPPCHVLVQFYVNNGELS 194 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH + Q+ Sbjct: 195 AQLYQRSADIGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEEQI 254 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I I ++ F ED L Y+P+ + K++V Sbjct: 255 KREPREFPKLRIVREIKNIDDFVAEDLELIDYKPYPKLYMKMAV 298 >gi|323167835|gb|EFZ53526.1| thymidylate synthase [Shigella sonnei 53G] gi|323951715|gb|EGB47590.1| thymidylate synthase [Escherichia coli H252] Length = 231 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 136/231 (58%), Positives = 177/231 (76%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 MRF+L GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+ Sbjct: 1 MRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60 Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG QWR+WP DG IDQI++++ L+ DP SRR IVSAWNV +DKMAL PCH FQFY Sbjct: 61 YGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V +GKLSCQLYQRS DVFLG+PFNIASY+LL M+A + G+F+ T GD HLY+NH Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHM 180 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Q LQLSR PR LP++II + +R+EDF + Y+PH I A V++ Sbjct: 181 DQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 231 >gi|45188092|ref|NP_984315.1| ADR219Cp [Ashbya gossypii ATCC 10895] gi|44982909|gb|AAS52139.1| ADR219Cp [Ashbya gossypii ATCC 10895] Length = 340 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 133/291 (45%), Positives = 171/291 (58%), Gaps = 28/291 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 QYLDL + +I+ G R DRTG GT S F Q+RFDLS FPLLTTKKV + ++ EL Sbjct: 50 QQYLDLCKRIIEHGEFRPDRTGTGTYSLFAPPQLRFDLSGDKFPLLTTKKVFTRGIILEL 109 Query: 60 LWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++G+LGP+YG QWR + Sbjct: 110 LWFIAGCTDGKKLSEQGVKIWEGNGSREYLDGLGLHDRREGDLGPVYGFQWRHFGAEYGT 169 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-- 157 DY G +DQ+ ++ ++ PY RR I+SAWN A KMALPPCH L QFYV G Sbjct: 170 CDDDYTGKGVDQLRELIDKIKNKPYDRRIILSAWNPADFPKMALPPCHVLSQFYVSFGPE 229 Query: 158 ----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 KLSCQLYQRS D+ LG+PFNIASY+LLT M+A V GEFIHT+GD H+Y++H Sbjct: 230 GSRPKLSCQLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMDAGEFIHTMGDAHVYSDHI 289 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+ R PR P + I + D+ F +DF + Y PH I +SV Sbjct: 290 AALKEQIERVPREFPNLRIKRKVTDIDDFTLDDFEITDYNPHPRIQMNMSV 340 >gi|325183269|emb|CCA17727.1| bifunctional dihydrofolate reductasethymidylate synthase 2 putative [Albugo laibachii Nc14] gi|325183915|emb|CCA18373.1| bifunctional dihydrofolate reductasethymidylate synthase 2 putative [Albugo laibachii Nc14] Length = 494 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 134/286 (46%), Positives = 184/286 (64%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 +QYL+L+R+++ G +++DRTGVGT+S FG QMRF+L PLLTTKKV W+ V ELL Sbjct: 209 YQYLNLIRNIVANGVEKQDRTGVGTKSIFGVQMRFNLRNDMFPLLTTKKVFWRGVAEELL 268 Query: 61 WFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------ 102 WF+ G++N L V IWD ++G+LGPIYG QWR + Sbjct: 269 WFISGNTNAKTLQDRKVRIWDGNGSSAYLKSIGLHHREEGDLGPIYGFQWRHFGAKYTDM 328 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G DQ++ ++ L+ DP RR I+SAWN +++MALPPCH + QFYV G+LS Sbjct: 329 HADYTGQGFDQLADVILKLKTDPNGRRIILSAWNPNDLNEMALPPCHLMCQFYVAKGQLS 388 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFNIASY+LLT M+A V GEF+H +GD H+Y NH E LQL Sbjct: 389 CQMYQRSADMGLGVPFNIASYALLTKMIAHVTYLTPGEFVHVIGDAHIYLNHLEPLKLQL 448 Query: 221 SRSPRTLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P ++I P ++ + F + DF L++YEP+ AI ++V Sbjct: 449 ERTPRPFPTLLIRPRNDLRTIDDFEFTDFELQNYEPYMAIKMAMAV 494 >gi|58337204|ref|YP_193789.1| thymidylate synthase [Lactobacillus acidophilus NCFM] gi|227903787|ref|ZP_04021592.1| thymidylate synthase [Lactobacillus acidophilus ATCC 4796] gi|62901151|sp|Q5FKL6|TYSY_LACAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|58254521|gb|AAV42758.1| thymidylate synthase [Lactobacillus acidophilus NCFM] gi|227868674|gb|EEJ76095.1| thymidylate synthase [Lactobacillus acidophilus ATCC 4796] Length = 318 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 146/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL+ ++ G D+ DRTG GTRS FG QMRFDLSKGFP+LTTKKV + + ELLW Sbjct: 6 QPYLDLINKIMIEGHDKNDRTGTGTRSYFGAQMRFDLSKGFPILTTKKVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHKNHIWDEWAFKNWVNSDEYTGPDMTDFGLRSQSDPEFNKIYQAELK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W DG+ IDQI ++++ ++ +P SRR IV+ Sbjct: 126 KFDRRILDDENFAKKYGNLGDVYGAQWRHWQKRDGSFIDQIENVIEQIKNNPDSRRMIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL M+A Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q GEFIHTLGD H+Y+NHF Q LSR P PQ+ +NP + F +D L Sbjct: 246 TGLQVGEFIHTLGDAHIYSNHFSQVKEMLSRKPYESPQLWLNPEKKHIEDFDMQDIKLVD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YKHHGTIKAPVAV 318 >gi|6729993|pdb|1BO8|A Chain A, Thymidylate Synthase R178t Mutant Length = 316 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYS R IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSTRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|157831558|pdb|1JMF|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase gi|157834039|pdb|1TVU|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase Length = 316 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFAIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|178847032|pdb|2H2Q|A Chain A, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase gi|178847033|pdb|2H2Q|B Chain B, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase gi|219689203|pdb|3CL9|A Chain A, Structure Of Bifunctional Tcdhfr-Ts In Complex With Mtx gi|219689204|pdb|3CLB|A Chain A, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq gi|219689205|pdb|3CLB|B Chain B, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq gi|219689206|pdb|3CLB|C Chain C, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq gi|219689207|pdb|3CLB|D Chain D, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq gi|237824093|pdb|3HBB|A Chain A, Structures Of Dihydrofolate Reductase-Thymidylate Synthase Of Trypanosoma Cruzi In The Folate-Free State And In Complex With Two Antifolate Drugs, Trimetrexate And Methotrexate gi|237824094|pdb|3HBB|B Chain B, Structures Of Dihydrofolate Reductase-Thymidylate Synthase Of Trypanosoma Cruzi In The Folate-Free State And In Complex With Two Antifolate Drugs, Trimetrexate And Methotrexate gi|237824095|pdb|3HBB|C Chain C, Structures Of Dihydrofolate Reductase-Thymidylate Synthase Of Trypanosoma Cruzi In The Folate-Free State And In Complex With Two Antifolate Drugs, Trimetrexate And Methotrexate gi|237824096|pdb|3HBB|D Chain D, Structures Of Dihydrofolate Reductase-Thymidylate Synthase Of Trypanosoma Cruzi In The Folate-Free State And In Complex With Two Antifolate Drugs, Trimetrexate And Methotrexate gi|297787629|pdb|3KJS|A Chain A, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity D Inhibitors: Dq1 Inhibitor Complex gi|297787630|pdb|3KJS|B Chain B, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity D Inhibitors: Dq1 Inhibitor Complex gi|297787631|pdb|3KJS|C Chain C, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity D Inhibitors: Dq1 Inhibitor Complex gi|297787632|pdb|3KJS|D Chain D, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity D Inhibitors: Dq1 Inhibitor Complex gi|20270967|gb|AAM18488.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|322825519|gb|EFZ30453.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma cruzi] Length = 521 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 129/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ L + D + Y P+ I K++V Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521 >gi|157831559|pdb|1JMG|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase Length = 316 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFGIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|313637263|gb|EFS02769.1| thymidylate synthase [Listeria seeligeri FSL S4-171] Length = 314 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 148/314 (47%), Positives = 190/314 (60%), Gaps = 50/314 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL GD+N+ YL +H +IW+EWA Sbjct: 61 WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IV Sbjct: 121 ESFKTHILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L ++A Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALXXXLIAR 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G GEF+HT+GD HLYNNH EQ QLSR+P LP++I++ + F D +L Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLILSDKPATIFDFDVADISLD 300 Query: 251 SYEPHAAILAKVSV 264 Y P A+I A +SV Sbjct: 301 GYNPDASIKAPISV 314 >gi|157834024|pdb|1TSY|A Chain A, Thymidylate Synthase R179k Mutant gi|157834025|pdb|1TSZ|A Chain A, Thymidylate Synthase R179k Mutant Length = 316 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSR+ IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRKLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|161507385|ref|YP_001577339.1| thymidylate synthase [Lactobacillus helveticus DPC 4571] gi|260101724|ref|ZP_05751961.1| thymidylate synthase [Lactobacillus helveticus DSM 20075] gi|172048271|sp|A8YUW0|TYSY_LACH4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|160348374|gb|ABX27048.1| Thymidylate synthase [Lactobacillus helveticus DPC 4571] gi|260084460|gb|EEW68580.1| thymidylate synthase [Lactobacillus helveticus DSM 20075] gi|328467983|gb|EGF39009.1| thymidylate synthase [Lactobacillus helveticus MTCC 5463] Length = 318 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G + DRTG GTRS FG QMRFDLS+GFPLLTTKKV + + ELLW Sbjct: 6 QPYLDLLQKIMSEGHGKDDRTGTGTRSYFGAQMRFDLSQGFPLLTTKKVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVNSSEYQGPDMTDFGLRSQSDPEFNKIYQAEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W +G IDQI+ +++ ++ P SRR IV+ Sbjct: 126 KFDQRILDDEDFAKKYGNLGDVYGAQWRHWEKREGGFIDQIADVIKQIKETPDSRRMIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNLIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q GEFIHTLGD H+Y NH +Q + LSR P PQ+ +NP ++ F +D + Sbjct: 246 TGLQVGEFIHTLGDAHIYRNHLKQVEELLSRKPYDSPQLWLNPEKKNIADFEMKDIKVVD 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YQHHGTIKAPVAV 318 >gi|331701412|ref|YP_004398371.1| Thymidylate synthase [Lactobacillus buchneri NRRL B-30929] gi|329128755|gb|AEB73308.1| Thymidylate synthase [Lactobacillus buchneri NRRL B-30929] Length = 316 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL R+V++ G + DRT GT STFGYQMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 6 YLDLARYVLENGHKKTDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ +L +H IWDEWA Sbjct: 66 KGDTNIQFLLKHKNHIWDEWAFEKFVASNDYTGPDMTDFSHRAQKDPEFNKVYQEQKMLF 125 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G IDQI +++ ++ P SRR IVSAW Sbjct: 126 CDRIVNDDDFAKKYGDLGLVYGSQWRAWKTSTGGTIDQIQNVIDLIKTHPDSRRMIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV++GKLSCQLYQRSGD+FLG+P+NIASY+LLT M+A G Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSCQLYQRSGDIFLGVPYNIASYALLTSMIARECG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + G+F+HT GD H+Y NH +Q + LSR PR P++ +NP L F D +++Y+ Sbjct: 246 LEVGDFVHTFGDAHIYLNHIDQVEELLSRKPRQAPELWLNPEKKHLDEFEMADIKVKNYD 305 Query: 254 PHAAILAKVSV 264 P+ I A V+V Sbjct: 306 PYPVIKAPVAV 316 >gi|330983977|gb|EGH82080.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 277 Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 135/277 (48%), Positives = 178/277 (64%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL VI G + DRTG GT++ FG Q R +L+ GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKAYLDLLTDVITNGVVKGDRTGTGTKAVFGRQFRHNLADGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L G++NV++L +GVSIW+EWA +DG LGP+YG QW +WP DG I+QI ++ L+ Sbjct: 61 WMLSGNTNVNWLKENGVSIWNEWATEDGYLGPLYGEQWTAWPTKDGGTINQIDYVINMLK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + KMALPPCH L+QFYV + KLS LY RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDESMSPQENARNGKMALPPCHLLYQFYVADNKLSSHLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ LG P+N+AS SLLT MLA E I T GD H Y NH +Q QLSR+PR L Sbjct: 181 SDLLLGNPYNLASVSLLTHMLAQQCDLIPHEVIITTGDTHAYLNHMDQIHEQLSRTPRKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I + +R+EDF + Y+P+ +I A V+V Sbjct: 241 PELKILRKPDSIYDYRFEDFEIVGYDPYPSIKAPVAV 277 >gi|20270965|gb|AAM18487.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 521 Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 129/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ L + D + Y P+ I K++V Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521 >gi|71653378|ref|XP_815327.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi strain CL Brener] gi|2833338|sp|Q27793|DRTS_TRYCR RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|301598498|pdb|3INV|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph, Dump And C-448 Antifolate gi|301598499|pdb|3INV|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph, Dump And C-448 Antifolate gi|301598500|pdb|3IRM|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Cycloguanil gi|301598501|pdb|3IRM|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Cycloguanil gi|301598502|pdb|3IRM|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Cycloguanil gi|301598503|pdb|3IRM|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Cycloguanil gi|301598504|pdb|3IRN|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Cycloguanil gi|301598505|pdb|3IRN|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Cycloguanil gi|301598506|pdb|3IRN|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Cycloguanil gi|301598507|pdb|3IRN|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Cycloguanil gi|301598508|pdb|3IRO|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Q-8 Antifolate gi|301598509|pdb|3IRO|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Q-8 Antifolate gi|301598510|pdb|3IRO|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Q-8 Antifolate gi|301598511|pdb|3IRO|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph And Q-8 Antifolate gi|1899001|gb|AAB49898.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|70880375|gb|EAN93476.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma cruzi] Length = 521 Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 129/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ L + D + Y P+ I K++V Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521 >gi|315655589|ref|ZP_07908487.1| thymidylate synthase [Mobiluncus curtisii ATCC 51333] gi|315489653|gb|EFU79280.1| thymidylate synthase [Mobiluncus curtisii ATCC 51333] Length = 272 Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 133/263 (50%), Positives = 183/263 (69%), Gaps = 2/263 (0%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 HQY DLL ++ G D+ DRTG GT S FG Q+R+DLS+GFP +TTK ++W VV ELLW Sbjct: 12 HQYEDLLADIMSQGIDKSDRTGTGTHSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 FL+G +N +L + + IWDEWA++ G+LGPIYG QWR+WP G +DQ+ ++++L+ Sbjct: 72 FLQGGTNNHWLQENNIHIWDEWANESGDLGPIYGHQWRAWPTAAG-PVDQVKKLLETLQN 130 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR +VSAWNV+ +D+MAL PCH FQ +V G+LS Q+YQRS D+FLG+PFNIASY Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241 +LLT MLA Q GE + T GD H+Y+NH +Q LQLSR P P + ++ + Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFPILELD-KADSIDG 249 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 + ++ L++Y+ H I A V+V Sbjct: 250 YTFDMIRLKNYQHHPKISAPVAV 272 >gi|259503404|ref|ZP_05746306.1| thymidylate synthase [Lactobacillus antri DSM 16041] gi|259168649|gb|EEW53144.1| thymidylate synthase [Lactobacillus antri DSM 16041] Length = 320 Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 189/313 (60%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R+V+K G ++ DRTG GTRS FGYQMRFDLSKGFP+LTTKKV + + ELLW Sbjct: 8 QQYLELARYVLKHGHEKTDRTGTGTRSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIRFLLQHHNHIWDEWAFKKWVESDEYHGPDMTDFGHRWLVDADFKQQYLAEKK 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W +G IDQI++++ ++ P SRR IVS Sbjct: 128 AFCQRIVDDEDFAKKYGDLGLVYGSQWRHWKTSNGQTIDQIANVIHQIKTTPDSRRMIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q G+F+HTLGD H+Y NH +Q QLSR+PR PQ+I+ + + D L Sbjct: 248 CGLQVGDFVHTLGDAHIYLNHLDQVKEQLSRTPREAPQLILPAEPKPIDQYEMTDIKLAG 307 Query: 252 YEPHAAILAKVSV 264 Y AAI A V+V Sbjct: 308 YTHEAAIKAPVAV 320 >gi|157833915|pdb|1TDA|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal Deletion: Role Of The C-Terminus In Alignment Of DUMP AND Ch2h4folate gi|157833916|pdb|1TDB|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal Deletion: Role Of The C-Terminus In Alignment Of DUMP AND Ch2h4folate gi|157833917|pdb|1TDC|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal Deletion: Role Of The C-Terminus In Alignment Of DUMP AND Ch2h4folate gi|157836378|pdb|2TDD|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal Deletion: Role Of The C-Terminus In Alignment Of DUMP AND Ch2h4folate Length = 315 Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 145/312 (46%), Positives = 186/312 (59%), Gaps = 50/312 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVS 263 Y+P+ AI A V+ Sbjct: 304 YDPYPAIKAPVA 315 >gi|157832137|pdb|1NJA|A Chain A, Thymidylate Synthase, Mutation, N229c With 2'-Deoxycytidine 5'-Monophosphate (Dcmp) gi|157832138|pdb|1NJB|A Chain A, Thymidylate Synthase gi|157834040|pdb|1TVV|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase Length = 316 Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFCIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|146329360|ref|YP_001209479.1| thymidylate synthase [Dichelobacter nodosus VCS1703A] gi|166231696|sp|A5EVG5|TYSY_DICNV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|146232830|gb|ABQ13808.1| thymidylate synthase [Dichelobacter nodosus VCS1703A] Length = 258 Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 156/250 (62%), Positives = 193/250 (77%), Gaps = 6/250 (2%) Query: 15 GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74 G D+ DRTGVGTRS FGYQMRFDL+ GFPLLTTKK+H+KS+V+ELLWFL G++N++YL++ Sbjct: 15 GVDKSDRTGVGTRSLFGYQMRFDLAAGFPLLTTKKMHFKSIVYELLWFLSGNTNIAYLNQ 74 Query: 75 HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 +GVSIWDEWADK+G+LGPIYG QWR+W DQI ++ SL+ +P SRR +VS+WN Sbjct: 75 NGVSIWDEWADKNGDLGPIYGKQWRNWAGR-----DQIHQVLTSLKTNPDSRRMLVSSWN 129 Query: 135 VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 VA +++MALPPCH LFQFYV NG+LSCQLYQRS DVFLG+PFNIASY+LLTMM+A Sbjct: 130 VAQLEEMALPPCHVLFQFYVANGRLSCQLYQRSADVFLGVPFNIASYALLTMMMAQQADL 189 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 + G+F+ T GDVHLY NHF QA QL R P LP+M I + + +EDF L Y Sbjct: 190 ELGDFVWTGGDVHLYRNHFAQAQEQLKRQPYPLPKMHIKRA-KSIDDYVFEDFLLVDYRC 248 Query: 255 HAAILAKVSV 264 HAAI A V+V Sbjct: 249 HAAIKAPVAV 258 >gi|227877073|ref|ZP_03995156.1| thymidylate synthase [Lactobacillus crispatus JV-V01] gi|256850330|ref|ZP_05555759.1| thymidylate synthase [Lactobacillus crispatus MV-1A-US] gi|262045992|ref|ZP_06018956.1| thymidylate synthase [Lactobacillus crispatus MV-3A-US] gi|227863321|gb|EEJ70757.1| thymidylate synthase [Lactobacillus crispatus JV-V01] gi|256712967|gb|EEU27959.1| thymidylate synthase [Lactobacillus crispatus MV-1A-US] gi|260573951|gb|EEX30507.1| thymidylate synthase [Lactobacillus crispatus MV-3A-US] Length = 318 Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV + + ELLW Sbjct: 6 QPYLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWIESAEYQGADMTDFGLRSQSDPEFNQVYQAEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W G IDQI+++++ ++ P SRR IV+ Sbjct: 126 KFDQRILDDPAFAQKYGNLGDVYGAQWRHWEKRSGGFIDQIANVIKQIKETPDSRRMIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL M+A Sbjct: 186 AWNPEDIPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF Q LSR+P P++ +NP + F +D + + Sbjct: 246 TGLKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLN 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YQHHGTIKAPVAV 318 >gi|13242405|ref|NP_077428.1| thymidylate synthase [Cercopithecine herpesvirus 9] gi|11036557|gb|AAG27186.1|AF275348_6 thymidylate synthetase [Cercopithecine herpesvirus 9] Length = 295 Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 126/283 (44%), Positives = 175/283 (61%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+ + ++ G + DRTG GT S FG Q R++L FPLLTTK+V WK VV ELLW Sbjct: 13 YQYLEQVNFILHNGVQKTDRTGTGTLSVFGMQSRYNLRNEFPLLTTKRVFWKGVVEELLW 72 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102 F++G +N + L GV IW K +G+LGP+YG QWR + Sbjct: 73 FIKGSTNSTELVEKGVKIWSAHGSKQFLHSNGFDNRQEGDLGPVYGFQWRHFGAEYVDMN 132 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y G +DQ+ +++ ++ +P RR I+ AWN + MALPPCH L QFYV N +LSC Sbjct: 133 TNYFGQGVDQLQNVINLIKTNPNDRRIILCAWNAKDVPLMALPPCHMLCQFYVANNELSC 192 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT M+A V + G+ +HT+GD H+Y NH E LQL+ Sbjct: 193 QMYQRSADMGLGVPFNIASYALLTYMIAHVTDLKTGDLVHTIGDAHIYLNHIEPLKLQLT 252 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + I + D+ F+ +DF L Y PH +I ++SV Sbjct: 253 RQPKQFPTLRITRTVKDINDFKADDFVLEGYNPHNSIPMEMSV 295 >gi|157834021|pdb|1TSV|A Chain A, Thymidylate Synthase R179a Mutant gi|157834022|pdb|1TSW|A Chain A, Thymidylate Synthase R179a Mutant Length = 316 Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRALIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|87122432|ref|ZP_01078312.1| thymidylate synthetase [Marinomonas sp. MED121] gi|86162225|gb|EAQ63510.1| thymidylate synthetase [Marinomonas sp. MED121] Length = 277 Score = 341 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 135/277 (48%), Positives = 190/277 (68%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y+ LL V++ G + DRTG GT S FG Q+R+DL++GFPLLTTKK+H +S++HELL Sbjct: 1 MLPYIQLLNDVLENGQFKGDRTGTGTYSVFGRQVRYDLAEGFPLLTTKKLHIRSILHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+G++N+ YL +GV+IWDEWA K+GELGP+YG QWRSW DG DQ+++++ SL+ Sbjct: 61 WFLKGETNIQYLSDNGVTIWDEWATKEGELGPVYGAQWRSWKGEDGKEYDQVTALINSLK 120 Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRRHI++ WNVA + MALPPCH L+QFYV + KLS LY RS Sbjct: 121 NNPNSRRHIINGWNVACLPDESKAPDVNAAEGRMALPPCHVLYQFYVCDNKLSASLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+FLG P+N AS + LT MLA GE + ++GD HLY+NH EQA +Q+ R+P+ L Sbjct: 181 NDLFLGNPYNTASLAFLTHMLAQQCDLDVGEIVISIGDCHLYSNHIEQAKIQVQRTPKKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++ I+ + +++EDF + Y+P I A +++ Sbjct: 241 PKLKIHRKPESIFDYKFEDFEILDYDPEPHISAPIAI 277 >gi|6729992|pdb|1BO7|A Chain A, Thymidylate Synthase R179t Mutant Length = 316 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRTLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|308180682|ref|YP_003924810.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046173|gb|ADN98716.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 316 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 6 YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 GD+N+ YL +H IWDEWA K+ Sbjct: 66 HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFASIYQAQMQTF 125 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W G IDQI+++++ ++ P SRR IVSAW Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD H+Y NH EQ QL+R PR PQ+ ++ + ++ D L Y+ Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305 Query: 254 PHAAILAKVSV 264 P AI A V++ Sbjct: 306 PAPAIKAPVAI 316 >gi|254556739|ref|YP_003063156.1| thymidylate synthase [Lactobacillus plantarum JDM1] gi|254045666|gb|ACT62459.1| thymidylate synthase [Lactobacillus plantarum JDM1] Length = 316 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 6 YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 GD+N+ YL +H IWDEWA K+ Sbjct: 66 HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFAPIYQAQIQAF 125 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W G IDQI+++++ ++ P SRR IVSAW Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD H+Y NH EQ QL+R PR PQ+ ++ + ++ D L Y+ Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305 Query: 254 PHAAILAKVSV 264 P AI A V++ Sbjct: 306 PAPAIKAPVAI 316 >gi|256847163|ref|ZP_05552609.1| thymidylate synthase [Lactobacillus coleohominis 101-4-CHN] gi|256715827|gb|EEU30802.1| thymidylate synthase [Lactobacillus coleohominis 101-4-CHN] Length = 320 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 144/313 (46%), Positives = 185/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL R+V++ G + DRTG GTRS FGYQMRFDL KGFP+LTTKKV + + ELLW Sbjct: 8 QQYLDLARYVLENGHLKGDRTGTGTRSIFGYQMRFDLQKGFPILTTKKVAFGLIKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEWA Sbjct: 68 FLRGDTNIRFLLQHNNHIWDEWAFKKWVTSAEYQGPDMTDFGHRWLSDPDFKEQYLAEKK 127 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWRSW G+ IDQI +++ ++ +P SRR IVS Sbjct: 128 QFCQRVLNDDEFAKKYGDLGLVYGSQWRSWRTSRGDTIDQIQNVINEIKKNPNSRRLIVS 187 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIARE 247 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 + G+F+HTLGD H+YNNH +Q QL R + P++I L + +D L Sbjct: 248 CQLEVGDFVHTLGDAHIYNNHIKQIKEQLMRQVHSAPKLIFPNGTKSLDEYTVDDIKLDG 307 Query: 252 YEPHAAILAKVSV 264 Y+ AI A V+V Sbjct: 308 YQHEPAIKAPVAV 320 >gi|184155363|ref|YP_001843703.1| thymidylate synthase [Lactobacillus fermentum IFO 3956] gi|227515167|ref|ZP_03945216.1| thymidylate synthase [Lactobacillus fermentum ATCC 14931] gi|183226707|dbj|BAG27223.1| thymidylate synthase [Lactobacillus fermentum IFO 3956] gi|227086499|gb|EEI21811.1| thymidylate synthase [Lactobacillus fermentum ATCC 14931] gi|299783196|gb|ADJ41194.1| Thymidylate synthase [Lactobacillus fermentum CECT 5716] Length = 319 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 188/313 (60%), Gaps = 51/313 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL RHV++FG + DRTG GT+S FGYQMRF+L +GFP+LTTKKV + V ELLW Sbjct: 8 EQYLDLARHVLEFGDQKGDRTGTGTKSVFGYQMRFNLQEGFPILTTKKVAFGLVKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK----------------------------------- 86 FLRGD+N+ +L H IWDEWA K Sbjct: 68 FLRGDTNIRFLLEHKNHIWDEWAFKKWVESDEYTGPDMTDFGRRSLVDAAFNEEYKKEKR 127 Query: 87 ---------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWRSW +G +DQI +++ ++ +P SRR IV+ Sbjct: 128 AFCQRILEDDDFAKQYGNLGLVYGSQWRSWQTPNG-PVDQIKKVIEQIKTNPDSRRLIVT 186 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN A +D MALPPCH +FQFYV+NGKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 187 AWNPADVDNMALPPCHTMFQFYVNNGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 246 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NH +Q QLSR PQ+I+ + ++ ED L Sbjct: 247 CGLEVGEFVHTLGDAHIYLNHLDQIKEQLSRPVHQAPQLILPAEAKPIDEYQMEDIKLEG 306 Query: 252 YEPHAAILAKVSV 264 YE AI A V+V Sbjct: 307 YEHEDAIKAPVAV 319 >gi|93279921|pdb|2G86|A Chain A, L. Casei Thymidylate Synthase Y261f In Complex With Substrate, Dump Length = 316 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HL+ NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLFVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|3097056|emb|CAA05895.1| dihydrofolate reductase-thymidylate synthetase precursor [Daucus carota] Length = 577 Score = 341 bits (875), Expect = 7e-92, Method: Composition-based stats. Identities = 128/282 (45%), Positives = 170/282 (60%), Gaps = 21/282 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ ++I G + DRT GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 296 YLGLVENIISNGVTKNDRTRTGTVSIFGCQMRFNLRKSFPLLTTKKVFWRGVVEELLWFI 355 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G +N L GV+IW+ ++G+LGPIYG QWR + D Sbjct: 356 SGSTNAKILKEKGVNIWEGNGSREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTDMHAD 415 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 416 YSGQGFDQLLDVISKIKNNPDDRRIIQSAWNPSDLRLMALPPCHMFAQFYVANGELSCQM 475 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSR 222 YQRS D+ LG+PFNIA+Y+LLT M+A V G+F+H++GD H+Y+NH + Sbjct: 476 YQRSADMGLGVPFNIAAYALLTCMIAHVCDLVPGDFVHSIGDAHVYSNHLSDLFETSFRM 535 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+T P + IN D+ SF DF L Y+PH I K++V Sbjct: 536 LPKTFPVLKINSGEKDIDSFEAADFKLIGYDPHQKIEMKMAV 577 >gi|157834023|pdb|1TSX|A Chain A, Thymidylate Synthase R179e Mutant Length = 316 Score = 341 bits (875), Expect = 7e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRELIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|157831560|pdb|1JMH|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn-229 Mutants Of Thymidylate Synthase Length = 316 Score = 341 bits (874), Expect = 7e-92, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFIIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|28378525|ref|NP_785417.1| thymidylate synthase [Lactobacillus plantarum WCFS1] gi|300767470|ref|ZP_07077382.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|38258752|sp|Q88W05|TYSY_LACPL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|28271361|emb|CAD64266.1| thymidylate synthase [Lactobacillus plantarum WCFS1] gi|300495289|gb|EFK30445.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 316 Score = 341 bits (874), Expect = 7e-92, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV + + ELLWFL Sbjct: 6 YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 GD+N+ YL +H IWDEWA K+ Sbjct: 66 HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFAPIYQAQMQTF 125 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G LG +YG QWR W G IDQI+++++ ++ P SRR IVSAW Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A G Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 GEF+HTLGD H+Y NH EQ QL+R PR PQ+ ++ + ++ D L Y+ Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305 Query: 254 PHAAILAKVSV 264 P AI A V++ Sbjct: 306 PAPAIKAPVAI 316 >gi|208969084|dbj|BAG74311.1| dihydrofolate reductase-thymidylate synthase [Babesia gibsoni] Length = 515 Score = 341 bits (874), Expect = 7e-92, Method: Composition-based stats. Identities = 133/281 (47%), Positives = 181/281 (64%), Gaps = 20/281 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+L V+ G+ +++RTG S FGYQMRFDLSK FPLLTTKKV +S++ ELLWF Sbjct: 229 QYLDILADVLSNGTLKQNRTGTDAYSKFGYQMRFDLSKSFPLLTTKKVALRSIIEELLWF 288 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 +RG +N + L V IW+ ++ +LGP+YG QWR + Sbjct: 289 IRGSTNGNDLLAKNVRIWELNGARSFLDNLGFTDREEHDLGPVYGFQWRHFGAKYLDMHA 348 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G IDQ+ ++++ ++ +P RR IV +WNVA + KMALPPCHC FQFYV +GKLSC Sbjct: 349 DYSGQGIDQLKTVIEKIKTNPNDRRLIVCSWNVADLGKMALPPCHCFFQFYVKDGKLSCL 408 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYS+LT M+A V G Q GEF+H L D H+Y +H E LQ+SR Sbjct: 409 MHQRSCDLGLGVPFNIASYSILTAMIAQVCGLQLGEFVHNLADAHVYVDHVEPVKLQMSR 468 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P PQ+ +NP++ D+ F +D + +Y H I +S Sbjct: 469 VPYPFPQLKLNPDVKDIEGFTIDDIQVVNYVSHPPIKMAMS 509 >gi|1093364|prf||2103303A dihydrofolate reductase/thymidylate synthase Length = 521 Score = 341 bits (874), Expect = 8e-92, Method: Composition-based stats. Identities = 128/284 (45%), Positives = 174/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRRFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ L +PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 418 CMLYQRSCDMGLAVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P ++ L + D + Y P+ I K++V Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521 >gi|260662124|ref|ZP_05863020.1| thymidylate synthase [Lactobacillus fermentum 28-3-CHN] gi|260553507|gb|EEX26399.1| thymidylate synthase [Lactobacillus fermentum 28-3-CHN] Length = 319 Score = 341 bits (874), Expect = 8e-92, Method: Composition-based stats. Identities = 150/313 (47%), Positives = 189/313 (60%), Gaps = 51/313 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL RHV++FG + DRTG GT+S FGYQMRF+L +GFP+LTTKKV + V ELLW Sbjct: 8 EQYLDLARHVLEFGDQKGDRTGTGTKSVFGYQMRFNLQEGFPILTTKKVAFGLVKSELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK----------------------------------- 86 FLRGD+N+ +L H IWDEWA K Sbjct: 68 FLRGDTNIRFLLEHKNHIWDEWAFKKWVESDEYTGPDMTDFGRRSLVDAAFNEEYKKEKR 127 Query: 87 ---------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G+LG +YG QWRSW +G +DQI +++ ++ +P SRR IV+ Sbjct: 128 AFCQRILEDDDFAKQYGDLGLVYGSQWRSWQTPNG-PVDQIKKVIEQIKTNPASRRLIVT 186 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN A +D MALPPCH +FQFYV+NGKLSCQLYQRS D+FLG+PFNIASY+LLT M+A Sbjct: 187 AWNPADVDNMALPPCHTMFQFYVNNGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 246 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NH +Q QLSR PQ+I+ + ++ ED L Sbjct: 247 CGLEVGEFVHTLGDAHIYLNHLDQIKEQLSRPVHQAPQLILPAEAKPIDEYQMEDIKLEG 306 Query: 252 YEPHAAILAKVSV 264 YE AI A V+V Sbjct: 307 YEHEDAIKAPVAV 319 >gi|242006823|ref|XP_002424244.1| Thymidylate synthase, putative [Pediculus humanus corporis] gi|212507613|gb|EEB11506.1| Thymidylate synthase, putative [Pediculus humanus corporis] Length = 316 Score = 340 bits (873), Expect = 9e-92, Method: Composition-based stats. Identities = 129/283 (45%), Positives = 186/283 (65%), Gaps = 20/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QY++ +++++K G + +DRTGVGT S FG QM++ L FPLLTTK+V WK +V ELLW Sbjct: 34 YQYINHIKNIMKNGVEMKDRTGVGTLSIFGAQMKWSLKDVFPLLTTKRVFWKGIVEELLW 93 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 FLRG +N L GVSIWD + ++G+LGP+YG QWR + Sbjct: 94 FLRGSTNALELKEKGVSIWDANSSREFLDSLGFYDREEGDLGPVYGFQWRHFGAKYKTMH 153 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY IDQ+ +I+ +++ PY RR I+SAWN I MALPPCHCL QF+V NG+L+ Sbjct: 154 DDYTNQGIDQLQNIIDTIKKRPYDRRMIMSAWNPVDIPIMALPPCHCLVQFHVANGELNS 213 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V + G F+H++GD H+Y NH + ++Q+ Sbjct: 214 QMYQRSADMGLGVPFNIASYSLLTYMVAHVTNLKPGVFVHSMGDSHIYLNHLKPLEVQIQ 273 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++ I + ++ F+++DF L Y P+ I +++V Sbjct: 274 RTPRPFPKLSIVRQVSNINDFKFDDFKLEGYNPYPKIQMEMAV 316 >gi|256843019|ref|ZP_05548507.1| thymidylate synthase [Lactobacillus crispatus 125-2-CHN] gi|312977199|ref|ZP_07788947.1| thymidylate synthase [Lactobacillus crispatus CTV-05] gi|256614439|gb|EEU19640.1| thymidylate synthase [Lactobacillus crispatus 125-2-CHN] gi|310895630|gb|EFQ44696.1| thymidylate synthase [Lactobacillus crispatus CTV-05] Length = 318 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 181/313 (57%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV + + ELLW Sbjct: 6 QPYLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVQSPEYQGPDMTNFGLRSQSDPEFNQVYQAEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W G IDQI+ +++ ++ P SRR IV+ Sbjct: 126 KFDQRILDDPAFAQKYGNLGDVYGAQWRHWEKRTGGFIDQIADVIKQIKETPDSRRMIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL M+A Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF Q LSR+P P++ +NP + F +D + + Sbjct: 246 TGLKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLN 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YQHHGTIKAPVAV 318 >gi|320580614|gb|EFW94836.1| Thymidylate synthase [Pichia angusta DL-1] Length = 296 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 131/290 (45%), Positives = 175/290 (60%), Gaps = 27/290 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 YLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV +K ++HEL Sbjct: 7 QAYLDLCQRIISEGEHRPDRTGTGTYSVFAPPQLRFSLKDNKFPLLTTKKVFFKGILHEL 66 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102 LWF+ G+++ L GV IW+ ++G+LGP+YG QWR + Sbjct: 67 LWFIAGETDAKKLTEKGVKIWEGNGSREYLDSLGLTHRREGDLGPVYGFQWRHFGAEYVD 126 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK- 158 DY G DQ++ I+ +LR +PY RR I+SAWN MALPPCH QFYV K Sbjct: 127 CDTDYTGKGYDQLAKIIDTLRTNPYDRRIILSAWNPPAFKDMALPPCHVFCQFYVSFPKN 186 Query: 159 ----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 LSC +YQRS D+ LG+PFNIASY+LLT M++ V+ + GEFIHT+GD H+Y +H + Sbjct: 187 SKPQLSCIMYQRSCDMGLGVPFNIASYALLTHMISHVVDMEPGEFIHTMGDSHVYCDHVD 246 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P + IN + + FR+EDF ++ YEP+ I ++SV Sbjct: 247 ALKEQLKRTPRAFPTLKINRKVTSIDDFRFEDFEVKDYEPYGPIKMQMSV 296 >gi|56753539|gb|AAW24972.1| SJCHGC01067 protein [Schistosoma japonicum] Length = 317 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 129/281 (45%), Positives = 182/281 (64%), Gaps = 21/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL+LL++++ G++R DRT GT + FG Q+RF L +PLLTTK V ++ +V ELLWF Sbjct: 36 YLNLLQYILAKGTERNDRTNTGTLAVFGPQLRFSLRNNEYPLLTTKTVFFRGIVEELLWF 95 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRS--------WP 102 +RG +N L V WD ++G+LGPIYG QWR Sbjct: 96 IRGSTNSRELSEKNVHFWDANGSREFLDGLGFTEREEGDLGPIYGFQWRHSGAEYIDCRT 155 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ++ +++ +R P+ RR ++ AWNV + KMALPPCHCL QF+V NG+LSCQ Sbjct: 156 DYTGQGVDQLADVIKLIRERPWDRRILIVAWNVKDLRKMALPPCHCLVQFFVANGELSCQ 215 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LGIPFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E Q+ R Sbjct: 216 LYQRSGDMGLGIPFNIASYALLTYMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKR 275 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 +PR P++ I + ++ F++EDF L Y+P+ + K++ Sbjct: 276 TPRPFPKLEIVREVENIDDFKFEDFKLIDYKPYPKLSMKMA 316 >gi|93279924|pdb|2G8D|A Chain A, Lactobacillus Casei Thymidylate Synthase Y261w-Dump Complex Length = 316 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HL+ NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLWVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|301111324|ref|XP_002904741.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 [Phytophthora infestans T30-4] gi|262095071|gb|EEY53123.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 [Phytophthora infestans T30-4] Length = 509 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 128/273 (46%), Positives = 172/273 (63%), Gaps = 23/273 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL+R ++ G+ R DRTG GT S FG QMRF L FPLLTTK+V W+ V ELLW Sbjct: 208 QYLDLIRKILTQGAKREDRTGTGTLSVFGAQMRFSLRNNVFPLLTTKRVFWRGVAEELLW 267 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ GD++ L + + IWD ++ G+LGP+YG QWR + Sbjct: 268 FISGDTSAHTLQQKDIHIWDGNGSREYLDSRGLQHREVGDLGPVYGFQWRHFGAKYTDMH 327 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ LR +P RR ++SAWN + +++MALPPCH QFYV NG+LSC Sbjct: 328 ADYTGKGVDQLAEVIHKLRTNPTDRRIVLSAWNPSDLNEMALPPCHMFCQFYVANGELSC 387 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT ++A V G + GEFIH +GD H+Y NH E QL+ Sbjct: 388 QMYQRSADMGLGVPFNIASYALLTRLVAQVTGLKPGEFIHVIGDAHVYLNHVEPLQKQLT 447 Query: 222 RSPRTLPQMIINPNIV-DLLSFRYEDFT-LRSY 252 R+P P + INP + F +EDF + Y Sbjct: 448 RTPCPFPTLHINPEKTSSIDEFTFEDFEWVSDY 480 >gi|1169424|sp|P45350|DRTS_DAUCA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|288615|emb|CAA78954.1| dihydrofolate reductase-thymidylate synthetase [Daucus carota] Length = 528 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 128/282 (45%), Positives = 170/282 (60%), Gaps = 21/282 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ ++I G + DRT GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+ Sbjct: 247 YLGLVENIISNGVTKNDRTRTGTVSIFGCQMRFNLRKSFPLLTTKKVFWRGVVEELLWFI 306 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G +N L GV+IW+ ++G+LGPIYG QWR + D Sbjct: 307 SGSTNAKILKEKGVNIWEGNGSREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTDMHAD 366 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ +P RR I SAWN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 367 YSGQGFDQLLDVISKIKNNPDDRRIIQSAWNPSDLRLMALPPCHMFAQFYVANGELSCQM 426 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSR 222 YQRS D+ LG+PFNIA+Y+LLT M+A V G+F+H++GD H+Y+NH + Sbjct: 427 YQRSADMGLGVPFNIAAYALLTCMIAHVCDLVPGDFVHSIGDAHVYSNHLSDLFETSFRM 486 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+T P + IN D+ SF DF L Y+PH I K++V Sbjct: 487 LPKTFPVLKINSGEKDIDSFEAADFKLIGYDPHQKIEMKMAV 528 >gi|93279922|pdb|2G89|A Chain A, L. Casei Thymidylate Synthase Y261a In Complex With Substrate, Dump Length = 316 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HL NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLAVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|224103383|ref|XP_002313034.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa] gi|222849442|gb|EEE86989.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa] Length = 414 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 125/281 (44%), Positives = 165/281 (58%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L++ +I G+ + R G GT S FG QMRF+L K FP LTTKKV W+ VV ELLWF+ Sbjct: 134 YLRLVQDIITDGNLKDGRAGTGTLSKFGCQMRFNLRKTFPFLTTKKVFWRGVVEELLWFI 193 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103 G +N L G+ IWD A +D G+LGP YG QWR + D Sbjct: 194 SGSTNAKVLQEKGIHIWDGNASRDYLDSVGLKDREEGDLGPFYGFQWRHFGARYTDMHAD 253 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ +R +P R ++SAWN + M LPPCH QFYV NG+LSCQ+ Sbjct: 254 YTGQGFDQLLDVIDKIRNNPNDRGIVLSAWNPTDLKLMVLPPCHMFVQFYVANGELSCQM 313 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PF+IASY+LLT ++A V G+FIH +GD H+Y+ H QL + Sbjct: 314 YQRSADMGLGVPFSIASYALLTHIIAHVCDLVPGDFIHVIGDAHVYHTHIRPLQEQLHKL 373 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + IN D+ SF DF L Y+PH I K++V Sbjct: 374 PKPFPILKINSEKKDIDSFVAADFELIGYDPHQKIEMKMAV 414 >gi|322788931|gb|EFZ14449.1| hypothetical protein SINV_05432 [Solenopsis invicta] Length = 302 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 139/284 (48%), Positives = 180/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+ VIK G+ R +RTGV T S FG QMRF L G FPLLTTK+V W++VV ELL Sbjct: 19 YQYLRLIEKVIKTGAKRGNRTGVDTYSIFGAQMRFSLRDGVFPLLTTKRVFWRAVVEELL 78 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +N L G+ IWDE ++G+LGP+YG QWR + Sbjct: 79 WFIKGSTNSKELTDKGIHIWDENGSRAFLDSYGFTNREEGDLGPVYGFQWRHFGAEYKDM 138 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY IDQ+ ++ ++ P RR I+SAWN I KMALPPCH QFYV+NG+LS Sbjct: 139 HTDYTRQGIDQLKEVIHKVKHSPEDRRIIMSAWNPVDIPKMALPPCHTFVQFYVNNGELS 198 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH + Q+ Sbjct: 199 AQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEEQV 258 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I I D+ F EDF L Y+P+A + K++V Sbjct: 259 KREPREFPKLKIVREIKDIDDFIAEDFELIDYKPYAKLYMKMAV 302 >gi|31544250|ref|NP_852828.1| thymidylate synthase [Mycoplasma gallisepticum str. R(low)] gi|33860236|sp|Q9XC19|TYSY_MYCGA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|31541094|gb|AAP56396.1| Thymidylate synthase [Mycoplasma gallisepticum str. R(low)] gi|284930289|gb|ADC30228.1| Thymidylate synthase [Mycoplasma gallisepticum str. R(high)] gi|284931056|gb|ADC30994.1| Thymidylate synthase [Mycoplasma gallisepticum str. F] Length = 289 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 144/294 (48%), Positives = 193/294 (65%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V+ G ++DRT GT S FG Q R+DL +GFPLLTTKK+ WK++ HELL Sbjct: 1 MKTYLDLLEKVMTKGEVKKDRTNTGTISYFGTQSRYDLREGFPLLTTKKMAWKAICHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91 WFL+GD+N+ YL H V+IW+EW + G+LG Sbjct: 61 WFLKGDTNIKYLVDHNVNIWNEWPYEAFKKSNDFKGESLQDFVEKIKTDNQFAQQYGKLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + N +DQI ++ ++ +P+SRR IVSAWN I +MALPPCH FQ Sbjct: 121 PVYGKQWRDF-----NGVDQIEWVINEIKTNPFSRRLIVSAWNPGEIKEMALPPCHSFFQ 175 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 F+V+ ++S QLYQRSGD+FLG+PFNIASYSLL +M+A V G + EFIHT+GD H+Y+ Sbjct: 176 FFVNEKYEISLQLYQRSGDLFLGVPFNIASYSLLLLMVAQVTGLKPAEFIHTIGDTHIYS 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH EQ +QL R P+ LP++ +NP+I ++ FR+ED +L +YE H I KV+V Sbjct: 236 NHLEQVKIQLQREPKKLPKVTLNPDIKNIFDFRFEDISLENYEHHDPIKGKVAV 289 >gi|322643701|gb|EFY40253.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|323226466|gb|EGA10674.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] Length = 231 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 136/231 (58%), Positives = 177/231 (76%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+ Sbjct: 1 MRFNLQEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60 Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG QWR+WP DG IDQI++++ L+ DP SRR IVSAWNV +DKMAL PCH FQFY Sbjct: 61 YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V +GKLSCQLYQRS DVFLG+PFNIASY+LL M+A G+F+ T GD HLY+NH Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHM 180 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 EQ LQLSR PR LP+++I L +R++DF + Y+PH I A V++ Sbjct: 181 EQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 231 >gi|23099195|ref|NP_692661.1| thymidylate synthase [Oceanobacillus iheyensis HTE831] gi|33301729|sp|Q8EQG0|TYSY_OCEIH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|22777423|dbj|BAC13696.1| thymidylate synthase [Oceanobacillus iheyensis HTE831] Length = 317 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 144/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + + K G R DRT GT S FG+Q+RFDL+KGFPLLTTK+V ++ V ELLW Sbjct: 5 QAYLDLCKQIFKTGEQRGDRTNTGTHSIFGHQIRFDLNKGFPLLTTKRVPFRLVASELLW 64 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL +H +IW+EWA Sbjct: 65 FIKGDTNIRYLLKHNNNIWNEWAFEKWVNSADYQGPDMANFGLRSQKDENFNKQYQEQME 124 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DK G+LG +YG QWR+W IDQ+ ++ S++ +P SRRHIVS Sbjct: 125 LFKTRILEDDSFADKYGDLGSVYGKQWRNWKTTQNETIDQLKDVIHSIKTNPNSRRHIVS 184 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I MALPPCH LFQFYV NGKLSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 185 AWNPEDIPTMALPPCHTLFQFYVSNGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHE 244 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + G+F+HT GD H+Y+NH EQ + QL R R PQ+IIN + + +D + + Sbjct: 245 CGLEVGDFVHTFGDAHIYSNHVEQVETQLEREIRDFPQLIINKDKNSIFEMDLDDLVIEN 304 Query: 252 YEPHAAILAKVSV 264 Y PH +I A ++V Sbjct: 305 YNPHPSIKAPIAV 317 >gi|302142537|emb|CBI19740.3| unnamed protein product [Vitis vinifera] Length = 469 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 129/281 (45%), Positives = 169/281 (60%), Gaps = 20/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L+ +I G+ + D+TG GT S FG QMRF+L FPLLTTK+V W+ VV ELLWF+ Sbjct: 189 YLRQLKEIISSGAHKADKTGTGTVSKFGCQMRFNLRLSFPLLTTKRVFWRGVVEELLWFI 248 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103 G +N L + + IWD A ++G+LGPIYG QWR + D Sbjct: 249 SGSTNAKVLQKKDIHIWDGNASREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTNMHAD 308 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQ+ ++ ++ P RR I+S+WN + + MALPPCH QFYV NG+LSCQ+ Sbjct: 309 YMGKGFDQLLDVIDKIKNKPDDRRIILSSWNPSDLKLMALPPCHMFAQFYVANGELSCQM 368 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+LLT M+A V G G+FI +GD H+Y H + QL + Sbjct: 369 YQRSADMGLGVPFNIASYALLTCMIAHVCGILPGDFILIIGDAHIYKTHIRPLEEQLQKL 428 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ P + INP D+ SF DF L Y PH I K+SV Sbjct: 429 PKPFPILKINPQKKDIESFVAADFELIGYNPHQKIEMKMSV 469 >gi|241759128|ref|ZP_04757237.1| thymidylate synthase [Neisseria flavescens SK114] gi|241320624|gb|EER56894.1| thymidylate synthase [Neisseria flavescens SK114] Length = 235 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 160/231 (69%), Positives = 191/231 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV+ G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL Sbjct: 1 MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL + VSIWDEWAD++G+LGP+YG QWRSWP DG IDQI+++V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 Y+LLTMM+A V G GEFIHT GD HLY+NH EQA LQLSR R+LP M Sbjct: 181 YALLTMMMAQVCGLGAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRSLPAMK 231 >gi|93279923|pdb|2G8A|A Chain A, Lactobacillus Casei Y261m In Complex With Substrate, Dump Length = 316 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HL NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLMVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|57100565|ref|XP_533309.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Canis familiaris] Length = 325 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 127/269 (47%), Positives = 167/269 (62%), Gaps = 20/269 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H++ G+ + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 33 QYLGQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 92 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGPIYG QWR + Sbjct: 93 IKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREEGDLGPIYGFQWRHFGAEYKDKDS 152 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ WN + MALPPCH L QFYV NG+LSCQ Sbjct: 153 DYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQ 212 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 213 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 272 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 PR P++ I + + F+ EDF + Sbjct: 273 EPRPFPKLRILRRVEKIDDFKAEDFQIEG 301 >gi|73961995|ref|XP_849163.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Canis familiaris] Length = 325 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 127/269 (47%), Positives = 167/269 (62%), Gaps = 20/269 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H++ G+ + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 33 QYLRQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 92 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGPIYG QWR + Sbjct: 93 IKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREEGDLGPIYGFQWRHFGAEYKDKDS 152 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ WN + MALPPCH L QFYV NG+LSCQ Sbjct: 153 DYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQ 212 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 213 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 272 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 PR P++ I + + F+ EDF + Sbjct: 273 EPRPFPKLRILRRVEKIDDFKAEDFQIEG 301 >gi|227893421|ref|ZP_04011226.1| thymidylate synthase [Lactobacillus ultunensis DSM 16047] gi|227864836|gb|EEJ72257.1| thymidylate synthase [Lactobacillus ultunensis DSM 16047] Length = 318 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 144/313 (46%), Positives = 182/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRFDLSKGFPLLTTK+V + + ELLW Sbjct: 6 QPYLDLLNKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKRVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHHNHIWDEWAFKNWVTSEEYDGPDMTDFGLRSQSDPEFNKIYQTEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W DG IDQI+++++ ++ P SRR IV+ Sbjct: 126 KFDQRILDDEAFAVKYGNLGDVYGAQWRHWQKRDGGFIDQIANVIKQIKETPDSRRMIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL M+A Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARK 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF Q LSR P PQ+ +NP+ + F +D + Sbjct: 246 TGLKVGEFVHTLGDAHIYRNHFNQVKELLSRKPYDSPQLWLNPDKKHIEDFEMQDIKVID 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YKHHGTIKAPVAV 318 >gi|254577775|ref|XP_002494874.1| ZYRO0A11704p [Zygosaccharomyces rouxii] gi|238937763|emb|CAR25941.1| ZYRO0A11704p [Zygosaccharomyces rouxii] Length = 310 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 133/290 (45%), Positives = 174/290 (60%), Gaps = 27/290 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 QYLDL++ ++ G R DRTG GT S F Q+RFDLS FPLLTTKKV K ++ EL Sbjct: 21 QQYLDLIQRILDEGEFRPDRTGTGTYSIFAPPQLRFDLSNDRFPLLTTKKVFTKGIILEL 80 Query: 60 LWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++G+LGP+YG QWR + Sbjct: 81 LWFISGCTDGKKLSEQGVKIWEGNGSREYLDKIGLHDRREGDLGPVYGFQWRHFGAKYRT 140 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ+ ++ L+ +PY RR I+SAWN MALPPCH QFYV Sbjct: 141 CDDDYTGQGFDQLHEVIHKLKNNPYDRRIIMSAWNPPDFPLMALPPCHVFSQFYVSFPKE 200 Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 KLSC LYQRS D+ LG+PFNIASYSLLT M+A V + GEFIHT+GD H+Y +H + Sbjct: 201 GKPKLSCLLYQRSCDMGLGVPFNIASYSLLTKMIAHVCDMEPGEFIHTMGDAHIYKDHID 260 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QLSR+P+ PQ+ I + ++ +F+YEDF + +Y PH I +SV Sbjct: 261 ALKEQLSRTPKDFPQLKIARKMDNIDNFKYEDFKIENYHPHGRIQMNMSV 310 >gi|6729893|pdb|1BPJ|A Chain A, Thymidylate Synthase R178t, R179t Double Mutant Length = 316 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 144/313 (46%), Positives = 185/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYS IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSTTLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|227513328|ref|ZP_03943377.1| thymidylate synthase [Lactobacillus buchneri ATCC 11577] gi|227083201|gb|EEI18513.1| thymidylate synthase [Lactobacillus buchneri ATCC 11577] Length = 317 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 147/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L ++V++ G + DRT GT STFGYQMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 7 YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 67 RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYIGPDMTNFSHRAQEDPDFNDLYQEQKKRF 126 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G IDQI +++ ++ P SRR IVSAW Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV++GKLSCQLYQRSGD+FLG+PFNIASY+LLT ++A Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGVPFNIASYALLTSLIARECN 246 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEF+HTLGD H+Y NH +Q QLSR P PQ+ +NP L F D +++Y+ Sbjct: 247 LQPGEFVHTLGDAHIYLNHVKQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306 Query: 254 PHAAILAKVSV 264 P+ +I A V+V Sbjct: 307 PYPSIKAPVAV 317 >gi|329766967|ref|ZP_08258495.1| thymidylate synthase [Gemella haemolysans M341] gi|328837692|gb|EGF87317.1| thymidylate synthase [Gemella haemolysans M341] Length = 310 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 143/313 (45%), Positives = 200/313 (63%), Gaps = 56/313 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +YL L +H++ G ++ DRTGVGT+S FGYQM+FDLS+GFPLLTTKKV++ V ELLW Sbjct: 4 KEYLKLCQHILDNGIEKEDRTGVGTKSVFGYQMKFDLSEGFPLLTTKKVNFNLVWSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ +L + +IW+EW Sbjct: 64 FIKGDTNIKFLLENKNNIWNEWAFKKWIESEKYTGPDMTDFGHRTLVDEEFSKQYKEQMA 123 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 ++K G+LG +YG QWR++ N IDQ+ ++V+ ++ +P SRR IVS Sbjct: 124 IFKERVLTDESFSEKYGDLGNVYGKQWRNF-----NGIDQLKNVVEQIKTNPSSRRLIVS 178 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 +WN A +D MALPPCH LFQFYV++GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A Sbjct: 179 SWNPAEVDTMALPPCHSLFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKE 238 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q Q+SR+P +LP++ +N + + + ED + + Sbjct: 239 CGLEVGEFVHTLGDAHIYKNHFDQVKEQMSRTPYSLPELKVN-DFESIFDLKIEDVEVVN 297 Query: 252 YEPHAAILAKVSV 264 YE H I A ++V Sbjct: 298 YESHPFIKAPIAV 310 >gi|6980894|pdb|1BP0|A Chain A, Thymidylate Synthase R23i Mutant Length = 316 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + D T GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDITHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|227524472|ref|ZP_03954521.1| thymidylate synthase [Lactobacillus hilgardii ATCC 8290] gi|227088342|gb|EEI23654.1| thymidylate synthase [Lactobacillus hilgardii ATCC 8290] Length = 317 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 148/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L ++V++ G + DRT GT STFGYQMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 7 YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 67 RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYIGPDMTNFSHRAQENPDFNDLYQEQKKRF 126 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G IDQI +++ ++ P SRR IVSAW Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV++GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGIPFNIASYALLTSLIARECN 246 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEF+HTLGD H+Y NH +Q QLSR P PQ+ +NP L F D +++Y+ Sbjct: 247 LQPGEFVHTLGDAHIYLNHVKQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306 Query: 254 PHAAILAKVSV 264 P+ +I A V+V Sbjct: 307 PYPSIKAPVAV 317 >gi|213428469|ref|ZP_03361219.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 231 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 136/231 (58%), Positives = 177/231 (76%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+ Sbjct: 1 MRFNLLEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60 Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG QWR+WP DG IDQI++++ L+ DP SRR IVSAWNV +DKMAL PCH FQFY Sbjct: 61 YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V +GKLSCQLYQRS DVFLG+PFNIASY+LL M+A G+F+ T GD HLY+NH Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHM 180 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 EQ LQLSR PR LP+++I L +R++DF + Y+PH I A V++ Sbjct: 181 EQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 231 >gi|293380554|ref|ZP_06626614.1| thymidylate synthase [Lactobacillus crispatus 214-1] gi|290922892|gb|EFD99834.1| thymidylate synthase [Lactobacillus crispatus 214-1] Length = 318 Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 181/313 (57%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV + + ELLW Sbjct: 6 QPYLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLEHNNYIWDEWAFKNWIESAEYQGADMTDFGLRSQSDPEFNQVYQAEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G LG +YG QWR W G IDQI+ +++ ++ P SRR IV+ Sbjct: 126 KFDQRILDDPAFAQKYGNLGDVYGAQWRHWKKRTGGFIDQIADVIKQIKETPDSRRMIVT 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL M+A Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF Q LSR+P P++ +NP + F +D + + Sbjct: 246 TGLKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLN 305 Query: 252 YEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 YQHHGTIKAPVAV 318 >gi|71894413|ref|YP_278521.1| thymidylate synthase [Mycoplasma synoviae 53] gi|123747941|sp|Q4A611|TYSY_MYCS5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|71851201|gb|AAZ43810.1| thymidylate synthase [Mycoplasma synoviae 53] Length = 289 Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 150/294 (51%), Positives = 194/294 (65%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL H+ G+ ++DRT +GT S FG Q R++L +GFPLLTTKK+ WK++ HELL Sbjct: 1 MKQYLHLLEHIKTSGTFKKDRTNIGTISLFGLQARYNLKEGFPLLTTKKMAWKAICHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91 WFL+GD+N+ YL + V+IW+EW K GELG Sbjct: 61 WFLKGDTNIKYLVDNNVNIWNEWPYEIFKKSNDYQGESLKEFSQKIKEDSSFAQKYGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + +DQIS ++ ++ +P SRR IVSAWNVA IDKMALPPCH FQ Sbjct: 121 PVYGKQWRDFF-----GVDQISQVINDIKNNPTSRRLIVSAWNVAQIDKMALPPCHAFFQ 175 Query: 152 FYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FYV DN +LS LYQRSGD+FLG+PFNIASYSLL M+A V + GEFIHT+GD H+Y+ Sbjct: 176 FYVNDNNELSLHLYQRSGDMFLGVPFNIASYSLLLSMVAQVTNLKVGEFIHTIGDAHIYS 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH +Q + QL R+P LP++I+N NI ++ F +ED L +Y H I AKV+V Sbjct: 236 NHIDQVNTQLERAPYKLPKLILNKNIKNIFDFTFEDIELENYISHETIKAKVAV 289 >gi|68482174|ref|XP_714971.1| hypothetical protein CaO19.11033 [Candida albicans SC5314] gi|68482301|ref|XP_714908.1| hypothetical protein CaO19.3549 [Candida albicans SC5314] gi|1174838|sp|P12461|TYSY_CANAL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|7537304|gb|AAA34374.2| thymidylate synthase precursor [Candida albicans] gi|46436507|gb|EAK95868.1| hypothetical protein CaO19.3549 [Candida albicans SC5314] gi|46436572|gb|EAK95932.1| hypothetical protein CaO19.11033 [Candida albicans SC5314] gi|238882292|gb|EEQ45930.1| thymidylate synthase [Candida albicans WO-1] Length = 315 Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 133/306 (43%), Positives = 174/306 (56%), Gaps = 43/306 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 YLDL + +I G R DRTG GT+S F Q+RFDLS FPLLTTKKV K ++HEL Sbjct: 10 QAYLDLCKRIIDEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++G+LGP+YG QWR + Sbjct: 70 LWFVAGSTDAKILSEKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKD 129 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ+ +++ L+ +PY RR I+SAWN KMALPPCH QFYV+ Sbjct: 130 CDSDYTGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPTS 189 Query: 156 -------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+ GEFIHT Sbjct: 190 SPDPNNPKQAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHT 249 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMII----NPNIVDLLSFRYEDFTLRSYEPHAAI 258 LGD H+Y +H + Q R P+ P+++I I + F++EDF + YEP+ I Sbjct: 250 LGDAHVYLDHIDALKEQFERIPKQFPKLVIKEERKNEIKSIDDFKFEDFEIVGYEPYPPI 309 Query: 259 LAKVSV 264 K+SV Sbjct: 310 KMKMSV 315 >gi|27904867|ref|NP_777993.1| thymidylate synthase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29428168|sp|P59427|TYSY_BUCBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|27904265|gb|AAO27098.1| thymidylate synthase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 264 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 146/264 (55%), Positives = 193/264 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL LL+ ++K GS+R+DRTG+GT S FGY M F+L GFPL+TTKK H+ ++VHELL Sbjct: 1 MKSYLVLLKKILKEGSNRKDRTGIGTLSVFGYHMEFNLKLGFPLITTKKCHFPAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL+ H +SIW+ WAD+ G LGPIYG QWRSW DG VIDQI +++ ++ Sbjct: 61 WFLKGDTNIKYLNDHNISIWNPWADERGYLGPIYGEQWRSWKTKDGRVIDQIDNVIHLIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV + KMAL PCH LFQF+V + L CQLYQRS DVFLG+PFNIAS Sbjct: 121 NNPNSRRIVVSSWNVGDLHKMALLPCHVLFQFHVVDHVLHCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 YSLLT M+A + G FI T GDVHLY NH +QA Q+ R P LP+++IN + Sbjct: 181 YSLLTHMIAQQCNLKVGNFIWTGGDVHLYKNHIKQAKKQILRRPYLLPKLVINRKPTQIF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++ +DF L +Y+ H +I AK+++ Sbjct: 241 NYLLQDFNLLNYKYHPSIHAKIAI 264 >gi|294878205|ref|XP_002768310.1| dihydrofolate reductase-thymidylate synthase, putative [Perkinsus marinus ATCC 50983] gi|239870558|gb|EER01028.1| dihydrofolate reductase-thymidylate synthase, putative [Perkinsus marinus ATCC 50983] Length = 492 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 129/286 (45%), Positives = 175/286 (61%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 ++YL L+ +I+ G D DRTGVGT++ F MRF L G FPLLTTK+V W+ VV ELL Sbjct: 207 YEYLRLIEEIIENGEDADDRTGVGTKTIFSCHMRFSLRDGVFPLLTTKRVFWRGVVEELL 266 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWPDY---- 104 WF+RGD+N +L GV IWD ++G+LGP+YG QWR + Sbjct: 267 WFIRGDTNAKHLSDQGVKIWDLNGTREFLDGRGLTHREEGDLGPVYGFQWRHFGADYVDM 326 Query: 105 -----DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGK 158 +DQ++ +++ L+ +P RR I++AWN + MALPPCH + QFYV+ + Sbjct: 327 HADYSKSGGVDQLAEVIRQLKENPMDRRIIMTAWNPTALPLMALPPCHMMCQFYVNSKQE 386 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC +YQRS D+ LG+PFNIASY+LLT MLA V G + GEF H LG+ H+YNNH E Sbjct: 387 LSCAMYQRSADMGLGVPFNIASYALLTCMLAQVCGLKPGEFCHHLGNTHVYNNHIEPLRQ 446 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P + INPN+ + + DF L Y P I +++V Sbjct: 447 QLKRTPRPFPLLKINPNVKTIDDIKSSDFELIGYNPWGKIAMEMAV 492 >gi|227510321|ref|ZP_03940370.1| thymidylate synthase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189973|gb|EEI70040.1| thymidylate synthase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 317 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 148/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L ++V++ G + DRT GT STFGYQMRFDLSKGFPLLTTKKV + + ELLWFL Sbjct: 7 YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 RGD+N+ +L +H IWDEWA Sbjct: 67 RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYTGPDMTNFSHRAQEDPDFNNLYQEQKKRF 126 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W G IDQI +++ ++ P SRR IVSAW Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + MALPPCH +FQFYV++GKLSCQLYQRSGD+FLG+PFNIASY+LLT ++A Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGVPFNIASYALLTSLIARECH 246 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 Q GEF+HTLGD H+Y NH EQ QLSR P PQ+ +NP L F D +++Y+ Sbjct: 247 LQPGEFVHTLGDAHIYLNHVEQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306 Query: 254 PHAAILAKVSV 264 P+ +I A V+V Sbjct: 307 PYPSIKAPVAV 317 >gi|254460113|ref|ZP_05073529.1| thymidylate synthase [Rhodobacterales bacterium HTCC2083] gi|206676702|gb|EDZ41189.1| thymidylate synthase [Rhodobacteraceae bacterium HTCC2083] Length = 250 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 140/247 (56%), Positives = 180/247 (72%), Gaps = 1/247 (0%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78 DRTG GT S FG Q R+ ++ GFPL+TTKK+H KS++HELLWFL GD+N+ YL +GVS Sbjct: 4 TDRTGTGTTSHFGLQCRYPMADGFPLVTTKKLHLKSIIHELLWFLAGDTNIKYLKDNGVS 63 Query: 79 IWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 IWDEWAD++G+LGP+YG QWR WP D IDQI+ +V++++ P SRR IVSAWN A Sbjct: 64 IWDEWADENGDLGPVYGSQWRRWPSGTDMGPIDQITDLVEAIKKTPDSRRLIVSAWNPAE 123 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + MALPPCH L+Q + GKL QLYQRS D+FLG+PFNIASY+LL MLA V G + G Sbjct: 124 VPDMALPPCHTLWQVRIAGGKLHLQLYQRSADMFLGVPFNIASYALLLHMLAHVTGHEPG 183 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 +FIH++GD H+Y+NH EQ QL+RSP+ L Q+ I + L F Y+DF + Y+P A Sbjct: 184 DFIHSIGDAHIYSNHMEQVQTQLARSPKALSQLKIKRQVSSLFDFTYDDFEIIGYDPDAG 243 Query: 258 ILAKVSV 264 I A V+V Sbjct: 244 IKAPVAV 250 >gi|222615976|gb|EEE52108.1| hypothetical protein OsJ_33908 [Oryza sativa Japonica Group] Length = 574 Score = 338 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 125/273 (45%), Positives = 168/273 (61%), Gaps = 20/273 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL+L+ +I+ G+ + DRTG GT S FG QMRF+L FPLLTTKKV W+ VV ELLW Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F+ G ++ L G+ IWD ++G+LGP+YG QWR + Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ ++ +P RR I+SAWN + + KMALPPCH QFYV++G+LSC Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVESGELSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT M+A V G GEF+H +GD H+Y H + Q+ Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAHVCGLSPGEFVHVIGDAHVYRTHVRALEEQIQ 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 + P+ P + INP D+ SF DF L P Sbjct: 479 KLPKPFPVLKINPLKKDIDSFVASDFKLVGLSP 511 Score = 85.7 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 33/61 (54%) Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 ++G GEF+H +GD H+Y H + Q+ + P+ P + INP D+ SF DF L Sbjct: 505 KLVGLSPGEFVHVIGDAHVYRTHVRALEEQIQKLPKPFPVLKINPLKKDIDSFVASDFKL 564 Query: 250 R 250 Sbjct: 565 V 565 >gi|22001023|gb|AAM82248.1| dihydrofolate reductase/thymidylate synthase [Leishmania infantum] gi|321398942|emb|CAM65520.2| dihydrofolate reductase-thymidylate synthase [Leishmania infantum JPCM5] Length = 520 Score = 338 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 128/286 (44%), Positives = 170/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD +K+ +LGP+YG QWR + Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI SIV++++A+P RR + +AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH I +++V Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520 >gi|295426056|ref|ZP_06818726.1| thymidylate synthase [Lactobacillus amylolyticus DSM 11664] gi|295064225|gb|EFG55163.1| thymidylate synthase [Lactobacillus amylolyticus DSM 11664] Length = 319 Score = 338 bits (866), Expect = 7e-91, Method: Composition-based stats. Identities = 146/314 (46%), Positives = 185/314 (58%), Gaps = 51/314 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTG GT+S FG QMRFDLSKGFPLLTTK+V + + ELLW Sbjct: 6 QPYLDLLQKIMTEGHDKSDRTGTGTKSLFGAQMRFDLSKGFPLLTTKRVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L +H IWDEWA K+ Sbjct: 66 FLRGDTNIRFLLQHKNHIWDEWAFKNWVNSDEYQGPDMTDFGLRCQSDPDFNKIYQEEMK 125 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNV-IDQISSIVQSLRADPYSRRHIV 130 G LG +YG QWR W DGN IDQI ++++ ++ P SRR IV Sbjct: 126 RFDQRILDDEDFAKKYGNLGDVYGAQWRHWEKRDGNGFIDQIHNVIEQIKHTPDSRRMIV 185 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 +AWN + ALPPCH +FQFY+ +GKLS QLYQRSGD+FLG+PFNIASYSLL M+A Sbjct: 186 TAWNPEDVPNSALPPCHVMFQFYIADGKLSVQLYQRSGDMFLGVPFNIASYSLLLNMIAR 245 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G + GEFIHTLGD H+Y NHF+Q + LSR P PQ+ +NP+ + F D + Sbjct: 246 ETGLEVGEFIHTLGDAHIYRNHFKQVEELLSRKPYDSPQLWLNPDKKKIEDFEMSDIKVL 305 Query: 251 SYEPHAAILAKVSV 264 Y+ H I A V+V Sbjct: 306 DYKHHDTIKAPVAV 319 >gi|322496602|emb|CBZ31672.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 520 Score = 337 bits (865), Expect = 8e-91, Method: Composition-based stats. Identities = 128/286 (44%), Positives = 170/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD +K+ +LGP+YG QWR + Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI SIV++++A+P RR + +AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH I +++V Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520 >gi|22121984|gb|AAM88576.1| dhfr-ts [Leishmania chagasi] Length = 520 Score = 337 bits (865), Expect = 8e-91, Method: Composition-based stats. Identities = 128/286 (44%), Positives = 170/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD +K+ +LGP+YG QWR + Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI SIV++++A+P RR + +AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH I +++V Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520 >gi|241951452|ref|XP_002418448.1| thymidylate synthase, putative [Candida dubliniensis CD36] gi|223641787|emb|CAX43749.1| thymidylate synthase, putative [Candida dubliniensis CD36] Length = 315 Score = 337 bits (865), Expect = 9e-91, Method: Composition-based stats. Identities = 133/306 (43%), Positives = 174/306 (56%), Gaps = 43/306 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 YLDL + +I G R DRTG GT+S F Q+RFDLS FPLLTTKKV K ++HEL Sbjct: 10 QAYLDLCKKIIDEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++G+LGP+YG QWR + Sbjct: 70 LWFVAGSTDAKILSEKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKD 129 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ+ +++ L+ +PY RR I+SAWN KMALPPCH QFYV+ Sbjct: 130 CDSDYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPTS 189 Query: 156 -------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+ GEFIHT Sbjct: 190 QPDSNNPKQAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHT 249 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINP----NIVDLLSFRYEDFTLRSYEPHAAI 258 LGD H+Y +H + Q R P+ P+++I I + F++EDF + YEP+ I Sbjct: 250 LGDAHVYLDHIDALKEQFERIPKQFPKLVIKEERKAEIKSIDDFKFEDFEIIGYEPYPPI 309 Query: 259 LAKVSV 264 K+SV Sbjct: 310 KMKMSV 315 >gi|84996883|ref|XP_953163.1| bifunctional dihydrofolate reductase/thymidilate synthase [Theileria annulata strain Ankara] gi|65304159|emb|CAI76538.1| bifunctional dihydrofolate reductase/thymidilate synthase, putative [Theileria annulata] Length = 523 Score = 337 bits (865), Expect = 9e-91, Method: Composition-based stats. Identities = 123/281 (43%), Positives = 179/281 (63%), Gaps = 20/281 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL++L ++ G +++RTGV + FGYQMRFDLS+ FPLLTTKKV + ++ EL+WF Sbjct: 242 QYLEILADILNNGYHKKNRTGVDCIAKFGYQMRFDLSQSFPLLTTKKVFLRGIIEELIWF 301 Query: 63 LRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP-------- 102 +RG +N + L + V IW+ + ++ +LGP+YG QWR + Sbjct: 302 IRGSTNGNELLKKNVRIWELNGARSFLDNLGFYDREEQDLGPVYGFQWRHFGAKYIDMHA 361 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY IDQ+S +++ ++ +P +RR IV +WNVA + KMALPPCH LFQF+V +G LSC Sbjct: 362 DYTDQGIDQLSLVIERIKNNPDNRRLIVCSWNVADLSKMALPPCHLLFQFFVADGTLSCM 421 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYSLLT M+A + G + GEF+H LGD H+YNNH + Q+SR Sbjct: 422 MHQRSCDMGLGVPFNIASYSLLTYMIAHICGLKPGEFVHNLGDAHIYNNHIDAIKEQISR 481 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P P + +N I + F +D + +Y H I +++ Sbjct: 482 VPYPFPTLKLNKEITRIEDFTIDDIKVENYRCHPLIKMEMA 522 >gi|294155965|ref|YP_003560349.1| thymidylate synthase [Mycoplasma crocodyli MP145] gi|291599860|gb|ADE19356.1| thymidylate synthase [Mycoplasma crocodyli MP145] Length = 289 Score = 337 bits (865), Expect = 9e-91, Method: Composition-based stats. Identities = 149/294 (50%), Positives = 189/294 (64%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL LL+ V+ G RRDRTG GT FG Q R+DL KGFPLLTTKK+ WKS+V ELL Sbjct: 1 MTQYLKLLKTVLNTGMVRRDRTGTGTIGVFGTQTRYDLRKGFPLLTTKKMAWKSIVVELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91 WFL+G++N+ YL V+IW+EW K G LG Sbjct: 61 WFLKGETNIKYLVDRNVNIWNEWPYEIYKRSTDFQGETIEEFINKIKNDNEFAIKHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + N +DQI ++ LR P+SRR +VSAWN +DKMALPPCH LFQ Sbjct: 121 PVYGRQWRDF-----NGVDQIKYVINELRTKPFSRRILVSAWNPEEVDKMALPPCHALFQ 175 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FYV N +LS QLYQRSGD+FLG+PFNIASY+LL M+A V + GEFIHT+GD H+Y+ Sbjct: 176 FYVSSNDELSLQLYQRSGDLFLGVPFNIASYALLLHMVAQVTNLRVGEFIHTIGDAHIYS 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH +Q QL+R P LP +I+N + ++ F +ED L+ Y+ H+ I A+VSV Sbjct: 236 NHVDQVTEQLTRRPFKLPTIILNKKVKEIFDFEFEDIELKDYKSHSRIKAEVSV 289 >gi|300120673|emb|CBK20227.2| Thymidylate synthase [Blastocystis hominis] Length = 495 Score = 337 bits (865), Expect = 9e-91, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYL+L+R+++ G+ R DRT GTRS FG QMRF L+ G PLLTTKKV W+ +V ELLW Sbjct: 203 QYLNLIRYILDHGALRTDRTNTGTRSVFGTQMRFLLANGVIPLLTTKKVFWRGIVEELLW 262 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F+RG ++ L + IWD +++ +LGPIYG QWR + Sbjct: 263 FIRGCTDGRVLKEKNIHIWDGNGTRSFLDSVGLTQNEEDDLGPIYGFQWRHFGAAYEGRD 322 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY +DQ+ ++ L+ DPY+RR I+SAWN A + KMALPPCH + QFYV NG LSC Sbjct: 323 KDYSNQGVDQLKEVIHLLKTDPYNRRIILSAWNPADLRKMALPPCHVMSQFYVQNGYLSC 382 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASYSLLT++LA + G + GEF+H++GD H+Y NH E Q+ Sbjct: 383 QMYQRSADMGLGVPFNIASYSLLTILLAHITGLKPGEFVHSIGDTHVYVNHEEALLQQIE 442 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + I ++ + + DF L Y PH + K+++ Sbjct: 443 REPRPFPTLRITKQSENIEEYTFADFELVGYNPHETLKMKMAI 485 >gi|298694721|gb|ADI97943.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED133] Length = 318 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYNEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVGYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|126730946|ref|ZP_01746755.1| thymidylate synthase [Sagittula stellata E-37] gi|126708662|gb|EBA07719.1| thymidylate synthase [Sagittula stellata E-37] Length = 263 Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 154/264 (58%), Positives = 195/264 (73%), Gaps = 1/264 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD LR V+K G+D DRTG GTRS FG Q R+ L+ GFPL+TTKK+H +S+VHELL Sbjct: 1 MQQYLDALRTVLKEGTDTTDRTGTGTRSHFGLQCRYPLADGFPLVTTKKLHLRSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWR WP G IDQI++++ +R Sbjct: 61 WFLSGDTNIGYLKDNGVSIWDEWADENGDLGPVYGHQWRHWPSRKGE-IDQIATLLDMIR 119 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P SRR IVSAWN A + MALPPCH L+Q + GKL QLYQRS D+FLG+PFNIAS Sbjct: 120 TAPDSRRLIVSAWNPADVPDMALPPCHTLWQVRIAGGKLHLQLYQRSADMFLGVPFNIAS 179 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A V G++ G+FIHT+GD H+Y+NH +Q LQLSR+PR LP + + DL Sbjct: 180 YALLQHMIAHVTGYEPGDFIHTMGDAHIYSNHMDQVALQLSRTPRPLPTLRFTREVTDLF 239 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 FRY+DF +Y+P I A V+V Sbjct: 240 DFRYDDFAFDNYDPAPGIKAPVAV 263 >gi|329667138|gb|AEB93086.1| thymidylate synthase [Lactobacillus johnsonii DPC 6026] Length = 318 Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 180/313 (57%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ + + ELLW Sbjct: 6 QPYLDLLSKIMNEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L H IWDEWA Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVESSEYQGPDMTNFGLRSQEDPEFKKIYQEEME 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR W +G IDQI +++ ++ PYSRR IVS Sbjct: 126 KFDQKVLADQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL ++A Sbjct: 186 AWNPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLIARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHTLGD H+Y NHF Q L+RS P + +NP+ + F +D L + Sbjct: 246 TGLKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLIN 305 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 306 YRHHGTIKAPVAV 318 >gi|283470641|emb|CAQ49852.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ST398] Length = 318 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLELGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|302333040|gb|ADL23233.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JKD6159] Length = 318 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDNTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|71028992|ref|XP_764139.1| dihydrofolate reductase-thymidylate synthase [Theileria parva strain Muguga] gi|68351093|gb|EAN31856.1| dihydrofolate reductase-thymidylate synthase, putative [Theileria parva] Length = 522 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 122/281 (43%), Positives = 179/281 (63%), Gaps = 20/281 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL++L ++ G +++RTGV + FGYQMRFDLS+ FPLLTTKKV + ++ EL+WF Sbjct: 241 QYLEILADILNTGYHKKNRTGVDCIAKFGYQMRFDLSESFPLLTTKKVFLRGIIEELIWF 300 Query: 63 LRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP-------- 102 ++G +N + L + V IW+ + ++ +LGP+YG QWR + Sbjct: 301 IKGSTNGNELLKKNVRIWELNGARSFLDNLGFFDREEHDLGPVYGFQWRHFGAKYVDMHT 360 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY IDQ+S ++ ++ +P +RR IV +WNVA + KMALPPCH LFQF+V +G LSC Sbjct: 361 DYSNQGIDQLSLVIDRIKNNPDNRRLIVCSWNVADLSKMALPPCHLLFQFFVADGTLSCM 420 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYSLLT M+A + G + GEF+H LGD H+YNNH + Q+SR Sbjct: 421 MHQRSCDMGLGVPFNIASYSLLTYMIAQICGLKPGEFVHNLGDAHIYNNHIDAIKEQISR 480 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P P + +N +I + F +D + +Y H I +++ Sbjct: 481 VPYPFPTLRLNKDITRIEDFTIDDIKVENYRSHPVIKMEMA 521 >gi|282916694|ref|ZP_06324452.1| thymidylate synthase [Staphylococcus aureus subsp. aureus D139] gi|283770498|ref|ZP_06343390.1| thymidylate synthase [Staphylococcus aureus subsp. aureus H19] gi|282319181|gb|EFB49533.1| thymidylate synthase [Staphylococcus aureus subsp. aureus D139] gi|283460645|gb|EFC07735.1| thymidylate synthase [Staphylococcus aureus subsp. aureus H19] Length = 318 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 141/311 (45%), Positives = 187/311 (60%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + +YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVNYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|213409892|ref|XP_002175716.1| thymidylate synthase [Schizosaccharomyces japonicus yFS275] gi|212003763|gb|EEB09423.1| thymidylate synthase [Schizosaccharomyces japonicus yFS275] Length = 619 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 130/295 (44%), Positives = 172/295 (58%), Gaps = 32/295 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKGF-PLLTTKKVHWKSVVHEL 59 QYLDL++ +++ G R DRTG GTRS F Q+RF LS PLLTTKKV + V+ EL Sbjct: 325 QQYLDLIKRILETGELRNDRTGTGTRSIFAPPQLRFSLSNNTLPLLTTKKVFLRGVLQEL 384 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWFLRGD+N +L + IWD ++ G+LGP+YG QWR + Sbjct: 385 LWFLRGDTNAKHLTEKDIHIWDGNGSREFLDKMGFFDRAEGDLGPVYGFQWRHFGAKYTD 444 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ++ +V L+ +P RR I+SAWN A I +MALPPCH L QFYV Sbjct: 445 CNADYTGQGVDQLAQVVHQLKNNPNDRRIIMSAWNPAAIPQMALPPCHLLCQFYVSAPAQ 504 Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 +LSC +YQRS D+ LG+PFNIASYSLLT MLA ++ EFIH +GD H+Y +H Sbjct: 505 PGGRPRLSCMMYQRSADMGLGVPFNIASYSLLTHMLAHYCNYEAHEFIHVMGDCHIYIDH 564 Query: 213 FEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL+R P P++ + + + Y+DF + Y P I K+SV Sbjct: 565 IEALRTQLARKPLPFPKIHFRRSPREVGSIDGYEYDDFVVEGYNPWGPIKMKMSV 619 >gi|283481329|emb|CAZ69445.1| bifunctional dihydrofolate reductase-thymidylate synthase [Emiliania huxleyi virus 99B1] Length = 480 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 125/282 (44%), Positives = 169/282 (59%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL L+ V++ G R DRTG GT S FG MRF+LS FPLLTTK+ +WK +V ELLW Sbjct: 198 YQYLQLISKVLEHGEYRSDRTGTGTVSLFGETMRFNLSTHFPLLTTKRTYWKGIVEELLW 257 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F+RG +N + L V IWD +++G+LGP+YG QWR + Sbjct: 258 FIRGSTNANELAAKNVKIWDGNGSRDFLDSVGLVDNEEGDLGPVYGFQWRHFGADYKTMH 317 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 YD DQ+ +++ ++ +P SRR I+SAWN ++KMALPPCH + QFYV +G LSC Sbjct: 318 DSYDSQGTDQLQNVIDQIKNNPTSRRIIMSAWNPNALEKMALPPCHIMCQFYVHDGMLSC 377 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT ++A + GEFIH +GD H+Y NH + QL Sbjct: 378 QMYQRSADIGLGVPFNIASYALLTCLIAHFTNLKPGEFIHVIGDAHVYTNHIDALKTQLK 437 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + IN + +D L Y+ H I +S Sbjct: 438 RKPYDFPTIHINNMPKTIFDVTSDDIILNDYKCHPKIHMDMS 479 >gi|73852583|ref|YP_293867.1| bifunctional dihydrofolate reductase-thymidylate synthase [Emiliania huxleyi virus 86] gi|72415299|emb|CAI65536.1| bifunctional dihydrofolate reductase-thymidylate synthase [Emiliania huxleyi virus 86] Length = 480 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 125/282 (44%), Positives = 169/282 (59%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL L+ V++ G R DRTG GT S FG MRF+LS FPLLTTK+ +WK +V ELLW Sbjct: 198 YQYLQLISKVLEHGEYRSDRTGTGTVSLFGETMRFNLSTHFPLLTTKRTYWKGIVEELLW 257 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102 F+RG +N + L V IWD +++G+LGP+YG QWR + Sbjct: 258 FIRGSTNANELAAKNVKIWDGNGSRDFLDSVGLVDNEEGDLGPVYGFQWRHFGADYKTMH 317 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 YD DQ+ +++ ++ +P SRR I+SAWN ++KMALPPCH + QFYV +G LSC Sbjct: 318 DSYDSQGTDQLQNVIDQIKNNPTSRRIIMSAWNPNALEKMALPPCHLMCQFYVHDGMLSC 377 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIASY+LLT ++A + GEFIH +GD H+Y NH + QL Sbjct: 378 QMYQRSADIGLGVPFNIASYALLTCLIAHFTNLKPGEFIHVIGDAHVYTNHIDALKTQLK 437 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + IN + +D L Y+ H I +S Sbjct: 438 RKPYDFPTIHINNMPKTIFDVTSDDIILNDYKCHPKIHMDMS 479 >gi|255724850|ref|XP_002547354.1| thymidylate synthase [Candida tropicalis MYA-3404] gi|240135245|gb|EER34799.1| thymidylate synthase [Candida tropicalis MYA-3404] Length = 303 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 31/294 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 YLDL +IK G R DRTG GT+S F Q+RFDLS FPLLTTKKV K ++HEL Sbjct: 10 QAYLDLCERIIKEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++G+LGP+YG QWR + Sbjct: 70 LWFIAGSTDAKILTNKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKD 129 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ+ I++ L+ +PY RR I+SAWN DKMALPPCH QFYV+ Sbjct: 130 CDADYTGQGYDQLQDIIKKLKTNPYDRRIIMSAWNPPDFDKMALPPCHVFCQFYVNFPEN 189 Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+ GEFIHT+GD H+Y +H + Sbjct: 190 AKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTMGDAHVYLDHVD 249 Query: 215 QADLQLSRSPRTLPQMIINPN----IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P+ P+++I + I + F +EDF + YEP+ I K+SV Sbjct: 250 ALKEQLERIPKQFPKLVIKEDRKDEIKSIDDFEFEDFQIVGYEPYPPIKMKMSV 303 >gi|49483618|ref|YP_040842.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA252] gi|57650383|ref|YP_186311.1| thymidylate synthase [Staphylococcus aureus subsp. aureus COL] gi|82751018|ref|YP_416759.1| thymidylate synthase [Staphylococcus aureus RF122] gi|87160328|ref|YP_494017.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195159|ref|YP_499960.1| thymidylate synthase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221550|ref|YP_001332372.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509594|ref|YP_001575253.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142068|ref|ZP_03566561.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|257425491|ref|ZP_05601916.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428151|ref|ZP_05604549.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430782|ref|ZP_05607164.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 68-397] gi|257433541|ref|ZP_05609899.1| thymidylate synthase [Staphylococcus aureus subsp. aureus E1410] gi|257436382|ref|ZP_05612429.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M876] gi|258422540|ref|ZP_05685448.1| thymidylate synthase [Staphylococcus aureus A9635] gi|258451086|ref|ZP_05699121.1| thymidylate synthase [Staphylococcus aureus A5948] gi|262050396|ref|ZP_06023236.1| thymidylate synthase [Staphylococcus aureus D30] gi|282904009|ref|ZP_06311897.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C160] gi|282905774|ref|ZP_06313629.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908744|ref|ZP_06316562.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911007|ref|ZP_06318809.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914217|ref|ZP_06322004.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M899] gi|282919139|ref|ZP_06326874.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C427] gi|282924322|ref|ZP_06331996.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C101] gi|282927524|ref|ZP_06335141.1| thymidylate synthase [Staphylococcus aureus A9765] gi|283958192|ref|ZP_06375643.1| thymidylate synthase [Staphylococcus aureus subsp. aureus A017934/97] gi|284024427|ref|ZP_06378825.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 132] gi|293501243|ref|ZP_06667094.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 58-424] gi|293510204|ref|ZP_06668912.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M809] gi|293526798|ref|ZP_06671482.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M1015] gi|294850751|ref|ZP_06791469.1| thymidylate synthase [Staphylococcus aureus A9754] gi|295427938|ref|ZP_06820570.1| thymidylate synthase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591097|ref|ZP_06949735.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MN8] gi|304380994|ref|ZP_07363651.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|56749740|sp|Q6GGY0|TYSY_STAAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901166|sp|Q5HFZ6|TYSY_STAAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123291799|sp|Q2FYK5|TYSY_STAA8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123763295|sp|Q2FH11|TYSY_STAA3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123768559|sp|Q2YY40|TYSY_STAAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172048885|sp|A6QGX8|TYSY_STAAE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036949|sp|A8Z406|TYSY_STAAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|49241747|emb|CAG40437.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA252] gi|57284569|gb|AAW36663.1| thymidylate synthase [Staphylococcus aureus subsp. aureus COL] gi|82656549|emb|CAI80971.1| thymidylate synthase [Staphylococcus aureus RF122] gi|87126302|gb|ABD20816.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202717|gb|ABD30527.1| thymidylate synthase, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374350|dbj|BAF67610.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368403|gb|ABX29374.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257271948|gb|EEV04086.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274992|gb|EEV06479.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278910|gb|EEV09529.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 68-397] gi|257281634|gb|EEV11771.1| thymidylate synthase [Staphylococcus aureus subsp. aureus E1410] gi|257284664|gb|EEV14784.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M876] gi|257847297|gb|EEV71303.1| thymidylate synthase [Staphylococcus aureus A9635] gi|257861141|gb|EEV83954.1| thymidylate synthase [Staphylococcus aureus A5948] gi|259161515|gb|EEW46117.1| thymidylate synthase [Staphylococcus aureus D30] gi|269940922|emb|CBI49306.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TW20] gi|282313709|gb|EFB44102.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C101] gi|282316949|gb|EFB47323.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C427] gi|282322285|gb|EFB52609.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M899] gi|282324702|gb|EFB55012.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327008|gb|EFB57303.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331066|gb|EFB60580.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Btn1260] gi|282592064|gb|EFB97090.1| thymidylate synthase [Staphylococcus aureus A9765] gi|282595627|gb|EFC00591.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C160] gi|283790341|gb|EFC29158.1| thymidylate synthase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920356|gb|EFD97420.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M1015] gi|291096248|gb|EFE26509.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 58-424] gi|291467148|gb|EFF09666.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M809] gi|294822391|gb|EFG38842.1| thymidylate synthase [Staphylococcus aureus A9754] gi|295128296|gb|EFG57930.1| thymidylate synthase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575983|gb|EFH94699.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MN8] gi|302751257|gb|ADL65434.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340470|gb|EFM06407.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438170|gb|ADQ77241.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH60] gi|315195323|gb|EFU25710.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS00] gi|315195862|gb|EFU26230.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS01] gi|320140327|gb|EFW32184.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA131] gi|320142672|gb|EFW34475.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA177] gi|323438443|gb|EGA96197.1| thymidylate synthase [Staphylococcus aureus O11] gi|323444081|gb|EGB01692.1| thymidylate synthase [Staphylococcus aureus O46] gi|329314104|gb|AEB88517.1| Thymidylate synthase [Staphylococcus aureus subsp. aureus T0131] gi|329730552|gb|EGG66938.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21189] Length = 318 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|15924417|ref|NP_371951.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu50] gi|15927008|ref|NP_374541.1| thymidylate synthase [Staphylococcus aureus subsp. aureus N315] gi|21283046|ref|NP_646134.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MW2] gi|49486268|ref|YP_043489.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MSSA476] gi|148267914|ref|YP_001246857.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH9] gi|150393977|ref|YP_001316652.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH1] gi|156979746|ref|YP_001442005.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu3] gi|253315250|ref|ZP_04838463.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732066|ref|ZP_04866231.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733326|ref|ZP_04867491.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH130] gi|255006216|ref|ZP_05144817.2| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795518|ref|ZP_05644497.1| thymidylate synthase [Staphylococcus aureus A9781] gi|258413327|ref|ZP_05681603.1| thymidylate synthase [Staphylococcus aureus A9763] gi|258420567|ref|ZP_05683509.1| thymidylate synthase [Staphylococcus aureus A9719] gi|258434662|ref|ZP_05688736.1| thymidylate synthase [Staphylococcus aureus A9299] gi|258444762|ref|ZP_05693091.1| thymidylate synthase [Staphylococcus aureus A8115] gi|258447404|ref|ZP_05695548.1| thymidylate synthase [Staphylococcus aureus A6300] gi|258449245|ref|ZP_05697348.1| thymidylate synthase [Staphylococcus aureus A6224] gi|258454623|ref|ZP_05702587.1| thymidylate synthase [Staphylococcus aureus A5937] gi|269203049|ref|YP_003282318.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED98] gi|282892921|ref|ZP_06301156.1| thymidylate synthase [Staphylococcus aureus A8117] gi|282927952|ref|ZP_06335561.1| thymidylate synthase [Staphylococcus aureus A10102] gi|295406371|ref|ZP_06816178.1| thymidylate synthase [Staphylococcus aureus A8819] gi|296275287|ref|ZP_06857794.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MR1] gi|297207915|ref|ZP_06924348.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244600|ref|ZP_06928483.1| thymidylate synthase [Staphylococcus aureus A8796] gi|300911999|ref|ZP_07129442.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH70] gi|54039797|sp|P67047|TYSY_STAAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54039798|sp|P67048|TYSY_STAAW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54042283|sp|P67046|TYSY_STAAM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|56749711|sp|Q6G9D4|TYSY_STAAS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231737|sp|A7X2B3|TYSY_STAA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036947|sp|A6U1P7|TYSY_STAA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036948|sp|A5ISV8|TYSY_STAA9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|13701225|dbj|BAB42520.1| thymidylate synthase [Staphylococcus aureus subsp. aureus N315] gi|14247198|dbj|BAB57589.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu50] gi|21204485|dbj|BAB95182.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MW2] gi|49244711|emb|CAG43146.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MSSA476] gi|147740983|gb|ABQ49281.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH9] gi|149946429|gb|ABR52365.1| Thymidylate synthase [Staphylococcus aureus subsp. aureus JH1] gi|156721881|dbj|BAF78298.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu3] gi|253724199|gb|EES92928.1| thymidylate synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728678|gb|EES97407.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH130] gi|257789490|gb|EEV27830.1| thymidylate synthase [Staphylococcus aureus A9781] gi|257839891|gb|EEV64359.1| thymidylate synthase [Staphylococcus aureus A9763] gi|257843515|gb|EEV67922.1| thymidylate synthase [Staphylococcus aureus A9719] gi|257849023|gb|EEV73005.1| thymidylate synthase [Staphylococcus aureus A9299] gi|257850255|gb|EEV74208.1| thymidylate synthase [Staphylococcus aureus A8115] gi|257853595|gb|EEV76554.1| thymidylate synthase [Staphylococcus aureus A6300] gi|257857233|gb|EEV80131.1| thymidylate synthase [Staphylococcus aureus A6224] gi|257863006|gb|EEV85770.1| thymidylate synthase [Staphylococcus aureus A5937] gi|262075339|gb|ACY11312.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED98] gi|282590249|gb|EFB95329.1| thymidylate synthase [Staphylococcus aureus A10102] gi|282764918|gb|EFC05043.1| thymidylate synthase [Staphylococcus aureus A8117] gi|285817105|gb|ADC37592.1| Thymidylate synthase [Staphylococcus aureus 04-02981] gi|294968959|gb|EFG44981.1| thymidylate synthase [Staphylococcus aureus A8819] gi|296887489|gb|EFH26389.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178630|gb|EFH37876.1| thymidylate synthase [Staphylococcus aureus A8796] gi|300886245|gb|EFK81447.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH70] gi|312829821|emb|CBX34663.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129137|gb|EFT85132.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS03] gi|329727369|gb|EGG63825.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21172] gi|329733414|gb|EGG69746.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21193] Length = 318 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYNGPDMTDFGHRALSDPEFNEQYKEQMKQF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVSAW Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|6729892|pdb|1BP6|A Chain A, Thymidylate Synthase R23i, R179t Double Mutant Length = 316 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 144/313 (46%), Positives = 185/313 (59%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDL + V+ G + D T GT S FG+QMRFDLSKGFPLLTTKKV + + ELLW Sbjct: 4 QPYLDLAKKVLDEGHFKPDITHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FL GD+N+ +L +H IWDEWA Sbjct: 64 FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSR IVS Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRTLIVS 183 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L + Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303 Query: 252 YEPHAAILAKVSV 264 Y+P+ AI A V+V Sbjct: 304 YDPYPAIKAPVAV 316 >gi|149247396|ref|XP_001528110.1| thymidylate synthase [Lodderomyces elongisporus NRRL YB-4239] gi|146448064|gb|EDK42452.1| thymidylate synthase [Lodderomyces elongisporus NRRL YB-4239] Length = 312 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 134/303 (44%), Positives = 178/303 (58%), Gaps = 40/303 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 YLDL +I G R DRTG GT+S F Q+RFDLS FPLLTTK+V K ++HEL Sbjct: 10 QAYLDLCERIINEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKRVFSKGIIHEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++G+LGP+YG QWR + Sbjct: 70 LWFIAGSTDAKILSDKGVKIWEGNGLREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKD 129 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ+ +++ L+ +PY RR I+SAWN KMALPPCH QFYV+ Sbjct: 130 CDADYTGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPSN 189 Query: 156 ----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+ GEFIHTLGD Sbjct: 190 KNDEQNSEKSRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLGD 249 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPN----IVDLLSFRYEDFTLRSYEPHAAILAK 261 H+Y +H E Q +R+P+ P+++I + I ++ F++EDF + YEP+ AI K Sbjct: 250 AHVYLDHVEALQEQFTRTPKQFPKLVIKEDRREEIKNIDDFKFEDFEIVGYEPYPAIKMK 309 Query: 262 VSV 264 +SV Sbjct: 310 MSV 312 >gi|31790281|gb|AAP57962.1| dihydrofolate reductase/thymidilate synthase [Babesia bovis] Length = 511 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 131/281 (46%), Positives = 179/281 (63%), Gaps = 20/281 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+L V+ G + +RTG S FGYQMRFDLS+ FPLLTTKKV +S++ ELLWF Sbjct: 230 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 289 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSWP-------- 102 ++G +N + L V IW+ E+ DK+G +LGPIYG QWR + Sbjct: 290 IKGSTNGNDLLAKNVRIWELNGRREFLDKNGFTEREEHDLGPIYGFQWRHFGAEYLDMHA 349 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G IDQ++ I+ ++ +P RR IV +WNV+ + KMALPPCHC FQFYV + KLSC Sbjct: 350 DYTGKGIDQLAEIINRIKTNPNDRRMIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 409 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYS+LT M+A V G GEF+H L D H+Y +H + Q++R Sbjct: 410 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 469 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P P++ +NP+I ++ F +D + Y H AI +S Sbjct: 470 IPYPFPRLRLNPDIKNIEDFTIDDIVVEDYVSHPAIPMAMS 510 >gi|145535888|ref|XP_001453677.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|2833339|sp|Q27828|DRTS_PARTE RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|434592|gb|AAC47025.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] gi|124421399|emb|CAK86280.1| unnamed protein product [Paramecium tetraurelia] Length = 462 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 135/283 (47%), Positives = 174/283 (61%), Gaps = 21/283 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLD++ ++K G + DRTGVGT S FG MRF+L++ FPLLTTKKV ++ VV ELLW Sbjct: 181 NQYLDMITKIMKEGVSKDDRTGVGTMSIFGQTMRFNLAQSFPLLTTKKVFFRGVVEELLW 240 Query: 62 FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------- 102 FLRG++N L GV IW+ ++ +LGP+YG QWR + Sbjct: 241 FLRGNTNGKLLLDKGVKIWEGNGTREYLDTIGLQHRQEHDLGPVYGFQWRHFGAKYKDCQ 300 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY +DQ+ I+Q L+ +P SRR I+SAWN + +MALPPCH + QF+V NGKLSC Sbjct: 301 TDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMALPPCHVMSQFFVANGKLSC 360 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D LGIPFNIASY+LLT MLA GEF+H LGD H+Y+NH E Q+ Sbjct: 361 MMYQRSCDFGLGIPFNIASYALLTYMLAKECNLNLGEFVHVLGDTHIYSNHVEALKKQIE 420 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + I N L + YEDF L Y H I K++V Sbjct: 421 RVPYPFPLLKIKGN-KSLFDYTYEDFELVGYNAHDKIEMKMAV 462 >gi|167756640|ref|ZP_02428767.1| hypothetical protein CLORAM_02177 [Clostridium ramosum DSM 1402] gi|167702815|gb|EDS17394.1| hypothetical protein CLORAM_02177 [Clostridium ramosum DSM 1402] Length = 292 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 135/295 (45%), Positives = 187/295 (63%), Gaps = 34/295 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD+ ++V++ G +R DRTG GTRS FGYQ R+DL GFPL+TTKK+ + + ELL Sbjct: 1 MKQYLDMCKYVLENGENREDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFLRPIAEELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91 WF++GD+N+ YL V IW+EW K G+LG Sbjct: 61 WFIKGDTNIKYLVDRNVKIWNEWPYEDFKKSPDFNGETIEEFVEKIKTDDEFAKKHGDLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + + +DQ++ +V SL +P+SRRHI+ AWN A +D MALPPCH Q Sbjct: 121 PVYGAQWRDF---NYEGVDQLAKLVDSLTNNPFSRRHIICAWNPAQVDNMALPPCHAFLQ 177 Query: 152 FYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 FYV K LSCQLYQRS D+FLG+PFNIASY+L+T MLA G++ EFIHT+GD H+Y Sbjct: 178 FYVSADKKYLSCQLYQRSADIFLGVPFNIASYALMTEMLARTCGYEAKEFIHTIGDAHIY 237 Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +HFE Q++R P ++++NP++ + ++ ED + Y+ H ++ KVSV Sbjct: 238 KDHFEVVKQQIAREPLPKCKLVLNPDVKSIFDYKIEDIKIEDYQSHGKLVGKVSV 292 >gi|331017946|gb|EGH98002.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 277 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 131/277 (47%), Positives = 178/277 (64%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LLR VI+ GS++ DRTG GT + FG Q R +L+ GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKQYLELLRDVIENGSEKGDRTGTGTTAVFGRQFRHNLADGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L G +N +L+ +GV+IWDEWA +DG+LGP+YG QW WP DG I+QI +V L+ Sbjct: 61 WMLSGSTNTKWLNENGVTIWDEWATEDGDLGPVYGAQWTGWPTKDGGKINQIDYMVDCLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPP-------------CHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WN + L P CH L+Q +V +GKLS QLY RS Sbjct: 121 NNPNSRRILFHGWNTEYLPDEKLSPQENVKNGKQALAVCHLLYQAFVADGKLSMQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+P+N A+ +LLT MLA E I +LGD H Y NH +Q + QL R+P+ L Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVSLGDAHAYANHRDQINTQLLRAPKKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+IIN + +++EDF + YE +I A V++ Sbjct: 241 PQLIINRRPSSIYDYKFEDFEVVGYEADPSIRAPVAI 277 >gi|4039150|gb|AAC97508.1| thymidylate synthase [Caenorhabditis elegans] Length = 315 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 120/284 (42%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 ++YL + +++ G+ R DRTG GT S FG Q ++ L G PLLTTK+V+WK V+ ELL Sbjct: 32 YKYLKQVEQILREGTRRDDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRVYWKGVLEELL 91 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF+ G ++ L V IW++ D ++G+LGP+YG QWR + Sbjct: 92 WFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDC 151 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ++ +++ ++ P SRR I+SAWN + + +M LPPCH + QFYVDNG+LS Sbjct: 152 HTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSDLGQMVLPPCHTMCQFYVDNGELS 211 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGD+ LG+PFN+ASY LLT M+A V G + G +HTLGD H+Y+NH + +QL Sbjct: 212 CQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPGTLVHTLGDAHVYSNHVDALKIQL 271 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P++ ++ + F + L Y+ H I ++V Sbjct: 272 DREPYAFPKIRFTRDVASIDDFTSDMIALDDYKCHPKIPMDMAV 315 >gi|71993377|ref|NP_491532.3| hypothetical protein Y110A7A.4 [Caenorhabditis elegans] gi|7331734|gb|AAF60422.1| Hypothetical protein Y110A7A.4 [Caenorhabditis elegans] Length = 312 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 120/284 (42%), Positives = 175/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 ++YL + +++ G+ R DRTG GT S FG Q ++ L G PLLTTK+V+WK V+ ELL Sbjct: 29 YKYLKQVEQILREGTRRDDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRVYWKGVLEELL 88 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF+ G ++ L V IW++ D ++G+LGP+YG QWR + Sbjct: 89 WFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDC 148 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ++ +++ ++ P SRR I+SAWN + + +M LPPCH + QFYVDNG+LS Sbjct: 149 HTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSDLGQMVLPPCHTMCQFYVDNGELS 208 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGD+ LG+PFN+ASY LLT M+A V G + G +HTLGD H+Y+NH + +QL Sbjct: 209 CQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPGTLVHTLGDAHVYSNHVDALKIQL 268 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P++ ++ + F + L Y+ H I ++V Sbjct: 269 DREPYAFPKIRFTRDVASIDDFTSDMIALDDYKCHPKIPMDMAV 312 >gi|66356564|ref|XP_625460.1| dihydrofolate reductase-thymidylate synthase [Cryptosporidium parvum Iowa II] gi|46226446|gb|EAK87446.1| dihydrofolate reductase-thymidylate synthase [Cryptosporidium parvum Iowa II] Length = 531 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 127/283 (44%), Positives = 179/283 (63%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV +S+ EL+WF Sbjct: 249 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 308 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 ++GD+N ++L V IW ++ +LGPIYG QWR + Sbjct: 309 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 368 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 369 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 428 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 429 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 488 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I +++V Sbjct: 489 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMEMAV 531 >gi|241889739|ref|ZP_04777037.1| thymidylate synthase [Gemella haemolysans ATCC 10379] gi|241863361|gb|EER67745.1| thymidylate synthase [Gemella haemolysans ATCC 10379] Length = 310 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 141/313 (45%), Positives = 197/313 (62%), Gaps = 56/313 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +YL L H+++ G ++ DRTGVGT+S FGYQM+F+LS+GFPLLTTKKV++ V ELLW Sbjct: 4 KEYLKLCNHILENGIEKEDRTGVGTKSIFGYQMKFNLSEGFPLLTTKKVNFNLVWSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ +L + +IW+EW Sbjct: 64 FIKGDTNIKFLLENKNNIWNEWAFKKWIESDEYTGPDMTDFGHRTLVDEKFSKQYKEQMT 123 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + K G+LG +YG QWR + N IDQ+ ++V+ ++ +P SRR IVS Sbjct: 124 IFKERILSDEEFSKKFGDLGNVYGKQWRDF-----NGIDQLKNVVEQIKTNPSSRRLIVS 178 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 +WN A +D MALPPCH LFQFYV++GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A Sbjct: 179 SWNPAEVDTMALPPCHSLFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKE 238 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q Q+SR+P +LP++ + + + + ED + + Sbjct: 239 CGLEVGEFVHTLGDAHIYKNHFDQVKEQMSRTPYSLPELKVK-DFESIFDLKIEDVEIVN 297 Query: 252 YEPHAAILAKVSV 264 YE H I A ++V Sbjct: 298 YESHPFIKAPIAV 310 >gi|323464469|gb|ADX76622.1| thymidylate synthase [Staphylococcus pseudintermedius ED99] Length = 317 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 139/311 (44%), Positives = 187/311 (60%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL + +++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V EL+WF+ Sbjct: 8 YHDLCKEILEIGNQRDDRTATGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELIWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEW---------------------------------------- 83 RGD+N+ YL ++ +IW+EW Sbjct: 68 RGDTNLRYLLQYNNNIWNEWAFEKYVQSEDYTGPDMTDFGHRAQSDAAFAETYREEMTKF 127 Query: 84 ----------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W DG DQ+ ++++ ++ +P SRRHI+SAW Sbjct: 128 KQQILTDDDFMKKHGDLGNVYGKQWRNWVSADGQQYDQLKALIEQIKTNPNSRRHIISAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I+ MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIASYSLLT ++A G Sbjct: 188 NPTEIETMALPPCHTLFQFYVQDNKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKECG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+RS P++ IN + + YED + +YE Sbjct: 248 LEVGEFVHTFGDAHIYSNHLDAVKTQLARSSFAPPELKINTD-RSIFDIEYEDLEIVNYE 306 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 307 SHPAIKAPIAV 317 >gi|126274226|ref|XP_001387889.1| Thymidylate synthase [Scheffersomyces stipitis CBS 6054] gi|126213759|gb|EAZ63866.1| Thymidylate synthase [Pichia stipitis CBS 6054] Length = 316 Score = 334 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 132/307 (42%), Positives = 176/307 (57%), Gaps = 44/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 YLDL +I G R DRTG GT+S F Q+RFDLS FPLLTTKKV + ++HEL Sbjct: 10 QAYLDLCEKIINEGEFRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSRGIIHEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++G+LGP+YG QWR + Sbjct: 70 LWFVAGSTDAKLLSEKGVKIWEGNGSREFLDNLGLTHRREGDLGPVYGFQWRHFGAEYKD 129 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ++ +++ L+ +PY RR I+SAWN KMALPPCH QF+V Sbjct: 130 CDADYTGQGYDQLADVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFFVSFPST 189 Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++ GEFIH Sbjct: 190 NPESNTSKQAKAETRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIH 249 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMII----NPNIVDLLSFRYEDFTLRSYEPHAA 257 TLGD H+Y +H + QL+R+P+ P+++I I + FR+EDF + YEP+ Sbjct: 250 TLGDAHVYLDHIDAIKEQLTRTPKDFPKLLIKEERKDKITSIDDFRFEDFEIVGYEPYPP 309 Query: 258 ILAKVSV 264 I K+SV Sbjct: 310 IKMKMSV 316 >gi|157864294|ref|XP_001680857.1| dihydrofolate reductase-thymidylate synthase [Leishmania major] gi|118936|sp|P07382|DRTS_LEIMA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|9546|emb|CAA36019.1| unnamed protein product [Leishmania major] gi|159310|gb|AAA29232.1| dihydrofolate reductase-thymidylate synthase (EC 1.5.1.3 and EC 2.1.1.45) [Leishmania major] gi|68124149|emb|CAJ02132.1| dihydrofolate reductase-thymidylate synthase [Leishmania major strain Friedlin] Length = 520 Score = 334 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 128/286 (44%), Positives = 171/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG+++ L + IWD +K+ +LGP+YG QWR + Sbjct: 295 WFLRGETSAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI IV++++ +P RR +V+AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIKLIVETIKTNPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH + Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P +I L + D + Y PH AI +++V Sbjct: 475 QLERVPHAFPTLIFKEERQYLEDYELTDMEVIDYVPHPAIKMEMAV 520 >gi|118935|sp|P16126|DRTS_LEIAM RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|9471|emb|CAA36020.1| unnamed protein product [Leishmania amazonensis] Length = 520 Score = 334 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 125/286 (43%), Positives = 169/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIAKEDRTGVGTLSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD ++ +LGP+YG QWR + Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENTEMDLGPVYGFQWRHFGAEYRGL 354 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-- 158 +YDG +DQI IV++++A+P RR + +AWN + KMALPPCH L QFYV+ K Sbjct: 355 EANYDGEGVDQIKFIVETIKANPNDRRLLFTAWNPCALHKMALPPCHLLAQFYVNTEKSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y +H + Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRSHIDALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH I +++V Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELMDMEVIDYVPHPPIKMEMAV 520 >gi|197107400|pdb|3DL5|A Chain A, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|197107401|pdb|3DL5|B Chain B, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|197107402|pdb|3DL5|C Chain C, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|197107403|pdb|3DL5|D Chain D, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|197107404|pdb|3DL5|E Chain E, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis Length = 521 Score = 334 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 127/283 (44%), Positives = 178/283 (62%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV +S+ EL+WF Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVFIRSIFEELIWF 298 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 ++GD+N ++L V IW ++ +LGPIYG QWR + Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I ++V Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521 >gi|297342898|pdb|3HJ3|A Chain A, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site Mut gi|297342899|pdb|3HJ3|B Chain B, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site Mut gi|297342900|pdb|3HJ3|C Chain C, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site Mut gi|297342901|pdb|3HJ3|D Chain D, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site Mut Length = 521 Score = 334 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 127/283 (44%), Positives = 178/283 (62%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV +S+ EL+WF Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 ++GD+N ++L V IW ++ +LGPIYG QWR + Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I ++V Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521 >gi|319892428|ref|YP_004149303.1| Thymidylate synthase [Staphylococcus pseudintermedius HKU10-03] gi|317162124|gb|ADV05667.1| Thymidylate synthase [Staphylococcus pseudintermedius HKU10-03] Length = 317 Score = 334 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 140/311 (45%), Positives = 188/311 (60%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL + +++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V EL+WF+ Sbjct: 8 YHDLCKEILEIGNQRDDRTATGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELIWFI 67 Query: 64 RGDSNVSYLHRHGVSIWDEW---------------------------------------- 83 RGD+N+ YL ++ +IW+EW Sbjct: 68 RGDTNLRYLLQYNNNIWNEWAFEKYVQSEDYTGPDMTDFGHRAQSDAAFAETYREEMTKF 127 Query: 84 ----------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR+W DG DQ+ ++++ ++A+P SRRHI+SAW Sbjct: 128 KQQILTDDDFMKKHGDLGNVYGKQWRNWVSADGQQYDQLKALIEQIKANPNSRRHIISAW 187 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N I+ MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIASYSLLT ++A G Sbjct: 188 NPTEIETMALPPCHTLFQFYVQDNKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKECG 247 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + QL+RS P++ IN + + YED + +YE Sbjct: 248 LEVGEFVHTFGDAHIYSNHLDAVKTQLARSSFAPPELKINTD-RSIFDIEYEDLEIVNYE 306 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 307 SHPAIKAPIAV 317 >gi|99082913|gb|ABF66630.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 334 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNKKLFHREVNDLGPIYGFQWRHFGAGYTNMH 455 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617 >gi|197107405|pdb|3DL6|A Chain A, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis gi|197107406|pdb|3DL6|B Chain B, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis gi|197107407|pdb|3DL6|C Chain C, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis gi|197107408|pdb|3DL6|D Chain D, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis gi|197107409|pdb|3DL6|E Chain E, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis Length = 521 Score = 334 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 126/283 (44%), Positives = 177/283 (62%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV + + EL+WF Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVFIRGIFEELIWF 298 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 ++GD+N ++L V IW ++ +LGPIYG QWR + Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I ++V Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521 >gi|67594753|ref|XP_665866.1| chain A, crystal structure of Dhfr [Cryptosporidium hominis TU502] gi|39654756|pdb|1QZF|A Chain A, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis gi|39654757|pdb|1QZF|B Chain B, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis gi|39654758|pdb|1QZF|C Chain C, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis gi|39654759|pdb|1QZF|D Chain D, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis gi|39654760|pdb|1QZF|E Chain E, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis gi|49258971|pdb|1SEJ|A Chain A, Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Cryptosporidium Hominis Bound To 1843u89NADPHDUMP gi|49258972|pdb|1SEJ|B Chain B, Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Cryptosporidium Hominis Bound To 1843u89NADPHDUMP gi|49258973|pdb|1SEJ|C Chain C, Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Cryptosporidium Hominis Bound To 1843u89NADPHDUMP gi|49258974|pdb|1SEJ|D Chain D, Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Cryptosporidium Hominis Bound To 1843u89NADPHDUMP gi|49258975|pdb|1SEJ|E Chain E, Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Cryptosporidium Hominis Bound To 1843u89NADPHDUMP gi|1480451|gb|AAC47230.1| bifunctional dihydrofolate reductase-thymidylate synthase [Cryptosporidium parvum] gi|54656722|gb|EAL35637.1| chain A, crystal structure of Dhfr [Cryptosporidium hominis] Length = 521 Score = 334 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 127/283 (44%), Positives = 178/283 (62%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV +S+ EL+WF Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 ++GD+N ++L V IW ++ +LGPIYG QWR + Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I ++V Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521 >gi|99030329|gb|ABF61430.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] gi|99082911|gb|ABF66629.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617 >gi|156098099|ref|XP_001615082.1| bifunctional dihydrofolate reductase-thymidylate synthase 1 [Plasmodium vivax SaI-1] gi|148803956|gb|EDL45355.1| bifunctional dihydrofolate reductase-thymidylate synthase 1, putative [Plasmodium vivax] Length = 624 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKIAMEMA 623 >gi|227890206|ref|ZP_04008011.1| thymidylate synthase [Lactobacillus johnsonii ATCC 33200] gi|227849208|gb|EEJ59294.1| thymidylate synthase [Lactobacillus johnsonii ATCC 33200] Length = 318 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 141/313 (45%), Positives = 180/313 (57%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ + + ELLW Sbjct: 6 QPYLDLLSKIMNEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L H IWDEWA Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVESSEYQGPDMTNFGLRSQEDPEFKRIYQEEMQ 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR W +G IDQI +++ ++ PYSRR IVS Sbjct: 126 KFDQKVLEDQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL +++ Sbjct: 186 AWNPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLISRE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHTLGD H+Y NHF Q L+RS P + +NP+ + F +D L + Sbjct: 246 TGLKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLIN 305 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 306 YRHHGTIKAPVAV 318 >gi|152149198|pdb|2OIP|A Chain A, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|152149199|pdb|2OIP|B Chain B, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|152149200|pdb|2OIP|C Chain C, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|152149201|pdb|2OIP|D Chain D, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis gi|152149202|pdb|2OIP|E Chain E, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis Length = 519 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 126/283 (44%), Positives = 177/283 (62%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV + + EL+WF Sbjct: 237 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRGIFEELIWF 296 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 ++GD+N ++L V IW ++ +LGPIYG QWR + Sbjct: 297 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 356 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 357 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 416 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 417 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 476 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR PQ+ + ++ F++ED L Y P+ I ++V Sbjct: 477 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 519 >gi|329770535|ref|ZP_08261913.1| thymidylate synthase [Gemella sanguinis M325] gi|328836284|gb|EGF85953.1| thymidylate synthase [Gemella sanguinis M325] Length = 310 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 198/313 (63%), Gaps = 56/313 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +YLDL +H++ G +++DRTGVGT+S FGYQM+FDL+ GFPLLTTKKV++ V ELLW Sbjct: 4 KEYLDLCKHILDNGIEKKDRTGVGTKSIFGYQMKFDLNNGFPLLTTKKVNFNLVWSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIW----------------------------------------- 80 F++GD+N+ +L ++ +IW Sbjct: 64 FIKGDTNIRFLLQNNNNIWNEWAFKKWVESDEYNGPDMTDFGHRTLVDEDFAKDYKEQMK 123 Query: 81 ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 DE+++K G+LG +YG QWR++ N +DQ+ ++++ ++ +P SRR IVS Sbjct: 124 FFKEKILTDDEFSNKYGDLGNVYGKQWRNF-----NGVDQLKNVIEQIKENPSSRRLIVS 178 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 +WN A +D MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A Sbjct: 179 SWNPAEVDTMALPPCHSLFQFYVSDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKE 238 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 + GEF+HTLGD H+YNNHF+Q + Q+SR+P LP + IN + + D L + Sbjct: 239 CNLEVGEFVHTLGDAHIYNNHFDQVNEQISRTPYDLPSLKIN-EFQSIFDLKISDVELVN 297 Query: 252 YEPHAAILAKVSV 264 YE H I A ++V Sbjct: 298 YESHPFIKAPIAV 310 >gi|22003398|gb|AAM88660.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] Length = 520 Score = 334 bits (857), Expect = 8e-90, Method: Composition-based stats. Identities = 128/285 (44%), Positives = 170/285 (59%), Gaps = 23/285 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD +K+ +LGP+YG QWR + Sbjct: 295 WFLRGETNARLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI IV++++A+P RR +V+AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIRFIVETIKANPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH + Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 QL R P P +I L + D + Y PH I +++ Sbjct: 475 QLERVPHAFPTLIFKAERQFLEDYELTDMEVIDYVPHPPIKMEMA 519 >gi|110004417|emb|CAK98755.1| putative thymidylate synthase transmembrane protein [Spiroplasma citri] Length = 298 Score = 334 bits (857), Expect = 8e-90, Method: Composition-based stats. Identities = 146/294 (49%), Positives = 197/294 (67%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL + R +++ G ++ DRT GT S FGYQMRF+LS+GFP+LTTKK+H+KS+V+ELL Sbjct: 10 MEQYLKMARFILEHGQEKDDRTNTGTISYFGYQMRFNLSEGFPILTTKKIHFKSIVYELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91 WF++GD+N+ YL H V IW+EW K+ G+LG Sbjct: 70 WFIKGDTNIKYLVDHDVRIWNEWPYKNYQASSKYNNETLAEFVEKIKTDANFAAEFGDLG 129 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ N +DQ++ ++++L+ +PYSRRHI+SAWN A +D+MALPPCH L Q Sbjct: 130 PVYGKQWRNF-----NGVDQLAKLLENLKKNPYSRRHIISAWNPAEVDEMALPPCHTLIQ 184 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FYV + KLSCQLYQRS DVFLG+PFNIASY+LLT ++A V+G G+F+HTLGD H+Y Sbjct: 185 FYVSKDNKLSCQLYQRSADVFLGVPFNIASYALLTHLIAQVVGLDAGDFVHTLGDCHIYK 244 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH Q QL RS LP + +N I L F++ED L +Y+P I V+V Sbjct: 245 NHLSQIKEQLRRSLGKLPTLKLNQTISSLFDFKFEDIMLENYDPAPLIKGTVAV 298 >gi|186702041|gb|ACC91332.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] gi|186702043|gb|ACC91333.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] gi|186702045|gb|ACC91334.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] gi|186702051|gb|ACC91337.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 624 Score = 334 bits (857), Expect = 8e-90, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 623 >gi|99082915|gb|ABF66631.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 334 bits (857), Expect = 8e-90, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617 >gi|159404|gb|AAA29272.1| thymidylate synthase-dihydrofolate reductase (EC 2.1.1.45; EC 1.5.1.3) [Leishmania tropica] Length = 520 Score = 334 bits (856), Expect = 9e-90, Method: Composition-based stats. Identities = 127/286 (44%), Positives = 171/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG+++ L + IWD +K+ +LGP+YG QWR + Sbjct: 295 WFLRGETSAQLLTDKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI IV++++ +P RR +V+AWN + KMA+PPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIKLIVETIKTNPNDRRLLVTAWNPCALQKMAVPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH + Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P +I L + D + Y PH AI +++V Sbjct: 475 QLERVPHAFPTLIFKEERQYLEDYELTDMEVIDYVPHPAIKMEMAV 520 >gi|186702047|gb|ACC91335.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 624 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 623 >gi|5565933|gb|AAD45276.1|AF152114_4 thymidylate synthase [Mycoplasma gallisepticum] Length = 289 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 143/294 (48%), Positives = 192/294 (65%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDLL V+ G ++DRT GT S FG Q R+DL +GFPLLTTKK+ WK++ HELL Sbjct: 1 MKTYLDLLEKVMTKGEVKKDRTNTGTISYFGTQSRYDLREGFPLLTTKKMAWKAICHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91 WFL+GD+N+ YL H V+IW+EW + G+LG Sbjct: 61 WFLKGDTNMKYLVDHNVNIWNEWPYEAFKKSNDFKGESLQDFVEKIKTDNQFAQQYGKLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + N +DQI ++ ++ +P+SRR IVSAWN I +MALPPCH FQ Sbjct: 121 PVYGKQWRDF-----NGVDQIEWVINEIKTNPFSRRLIVSAWNPGEIKEMALPPCHSFFQ 175 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 F+V+ ++S QLYQRSGD+FLG+PFNIASYSLL +M+A V + EFIHT+GD H+Y+ Sbjct: 176 FFVNEKYEISLQLYQRSGDLFLGVPFNIASYSLLLLMVAQVTWLKPAEFIHTIGDTHIYS 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH EQ +QL R P+ LP++ +NP+I ++ FR+ED +L +YE H I KV+V Sbjct: 236 NHLEQVKIQLQREPKKLPKVTLNPDIKNIFDFRFEDISLENYEHHDPIKGKVAV 289 >gi|186702049|gb|ACC91336.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 630 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 467 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 468 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 588 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 629 >gi|255717360|ref|XP_002554961.1| KLTH0F17864p [Lachancea thermotolerans] gi|238936344|emb|CAR24524.1| KLTH0F17864p [Lachancea thermotolerans] Length = 328 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 132/292 (45%), Positives = 172/292 (58%), Gaps = 29/292 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTF-GYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 QYLDL + +I+ G R DRTG GT S F Q+RFDLS FPLLTTK+V K ++ EL Sbjct: 37 QQYLDLCQRIIEEGDFRPDRTGTGTYSLFVPPQLRFDLSNDRFPLLTTKRVFTKGIILEL 96 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++ G+LGP+YG QWR + Sbjct: 97 LWFISGCTDGKKLSEQGVKIWEGNGSREYLDKLGLTDRREGDLGPVYGFQWRHFGADYKT 156 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154 DY DQ+ I+ ++ +P RR I+SAWN KMALPPCH QFYV Sbjct: 157 CEDDYTNQGFDQLEDIIHRIKTNPTDRRIIMSAWNPPDFAKMALPPCHVFSQFYVTLPKK 216 Query: 155 --DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 + KLSC LYQRS D+ LG+PFNIASY+LLT M+A V + GEFIHT+GD H+Y +H Sbjct: 217 EGERPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVCEMEPGEFIHTMGDAHVYKDH 276 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + Q+ R PR P++ I N+ D+ F+YEDF + Y PH I K+SV Sbjct: 277 IDALKEQIQRFPRDFPKLKIKRNVADINDFKYEDFEISEYNPHGKIQMKMSV 328 >gi|9625888|ref|NP_040136.1| thymidylate synthase [Human herpesvirus 3] gi|136617|sp|P09249|TYSY_VZVD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|259550834|sp|Q4JQW2|TYSY_VZVO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|60002|emb|CAA27896.1| thymidylate synthase [Human herpesvirus 3 strain Dumas] gi|46981424|gb|AAT07695.1| thymidylate synthase [Human herpesvirus 3] gi|46981495|gb|AAT07771.1| thymidylate synthase [Human herpesvirus 3] gi|66865982|gb|AAY57630.1| ORF13 [Human herpesvirus 3] gi|66866054|gb|AAY57701.1| ORF13 [Human herpesvirus 3] gi|83721821|emb|CAI44856.1| thymidylate synthase [Human herpesvirus 3] gi|90992812|gb|ABE03031.1| thymidylate synthase [Human herpesvirus 3] gi|91980314|gb|ABE67121.1| thymidylate synthase [Human herpesvirus 3] gi|94481811|gb|ABF21513.1| thymidylate synthase [Human herpesvirus 3] gi|94481885|gb|ABF21586.1| thymidylate synthase [Human herpesvirus 3] gi|94481959|gb|ABF21659.1| thymidylate synthase [Human herpesvirus 3] gi|94482033|gb|ABF21732.1| thymidylate synthase [Human herpesvirus 3] gi|94482107|gb|ABF21805.1| thymidylate synthase [Human herpesvirus 3] gi|94482181|gb|ABF21878.1| thymidylate synthase [Human herpesvirus 3] gi|94482255|gb|ABF21951.1| thymidylate synthase [Human herpesvirus 3] gi|94482329|gb|ABF22024.1| thymidylate synthase [Human herpesvirus 3] gi|94482403|gb|ABF22097.1| thymidylate synthase [Human herpesvirus 3] gi|94482477|gb|ABF22170.1| thymidylate synthase [Human herpesvirus 3] gi|94482551|gb|ABF22243.1| thymidylate synthase [Human herpesvirus 3] gi|111184746|gb|ABH08454.1| thymidylate synthase [Human herpesvirus 3] gi|157965782|gb|ABW06928.1| thymidylate synthase [Human herpesvirus 3] Length = 301 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 125/281 (44%), Positives = 180/281 (64%), Gaps = 20/281 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + ++++G +RDRTG+GT S FG Q R++L FPLLTTK+V W++VV ELLWF Sbjct: 20 QYLKQVDDILRYGVRKRDRTGIGTLSLFGMQARYNLRNEFPLLTTKRVFWRAVVEELLWF 79 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102 +RG ++ L + IWD + G+LGPIYG QWR + Sbjct: 80 IRGSTDSKELAAKDIHIWDIYGSSKFLNRNGFHKRHTGDLGPIYGFQWRHFGAEYKDCQS 139 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y IDQ+ +++ +++ +P SRR I+S+WN I M LPPCH L QFYV NG+LSCQ Sbjct: 140 NYLQQGIDQLQTVIDTIKTNPESRRMIISSWNPKDIPLMVLPPCHTLCQFYVANGELSCQ 199 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRSGD+ LG+PFNIA Y+LLT ++A V G + G+ IHT+GD H+Y NH + +QL+R Sbjct: 200 VYQRSGDMGLGVPFNIAGYALLTYIVAHVTGLKTGDLIHTMGDAHIYLNHIDALKVQLAR 259 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 SP+ P + I N+ D+ F+++DF L Y PH + +++ Sbjct: 260 SPKPFPCLKIIRNVTDINDFKWDDFQLDGYNPHPPLKMEMA 300 >gi|186702037|gb|ACC91330.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 624 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 623 >gi|319935855|ref|ZP_08010281.1| thymidylate synthase [Coprobacillus sp. 29_1] gi|319809122|gb|EFW05603.1| thymidylate synthase [Coprobacillus sp. 29_1] Length = 295 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 142/298 (47%), Positives = 191/298 (64%), Gaps = 37/298 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L +H+++ G DR DRTG GTRS FGYQ R+DL +GFPLLTTKK+ + + ELL Sbjct: 1 MKQYLELCKHILENGEDRDDRTGTGTRSVFGYQTRYDLREGFPLLTTKKMFLRPIAEELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD--------------------------------KDG 88 WF++GD+N+ YL V IW+EW K G Sbjct: 61 WFIKGDTNIKYLVDRNVRIWNEWPYEIFKKSEDFHGETLEEFVEKIKELSADDPFVIKYG 120 Query: 89 ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 ELGP+YG QWR++ + IDQ+S +V SL+ +PYSRRHI+ AWN A +D+MALPPCH Sbjct: 121 ELGPVYGRQWRNF---NNEGIDQVSKLVDSLKNNPYSRRHIICAWNPAEVDEMALPPCHS 177 Query: 149 LFQFYV--DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206 QFYV D LSCQLYQRS D FLG+PFNIASY+L T MLA V G++ EFIHT+GD Sbjct: 178 FLQFYVSNDQKYLSCQLYQRSADTFLGVPFNIASYALFTAMLAQVCGYEAKEFIHTIGDA 237 Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H+Y +HF+ Q+SR P +L Q+++N ++ + F +D + +Y+ + ++ KVSV Sbjct: 238 HIYKDHFDVVKEQMSREPLSLCQLVLNKDVKSIFDFTIDDIKIENYQSYGKLVGKVSV 295 >gi|314933617|ref|ZP_07840982.1| thymidylate synthase [Staphylococcus caprae C87] gi|313653767|gb|EFS17524.1| thymidylate synthase [Staphylococcus caprae C87] Length = 318 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 141/313 (45%), Positives = 186/313 (59%), Gaps = 51/313 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLW Sbjct: 7 KAYHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLW 66 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL ++ +IW+EWA ++ Sbjct: 67 FIKGDTNIQYLLKYNNNIWNEWAFENYVNSEDYQGPDMTNFGHRSQEDPEFNEQYKKEMK 126 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVS Sbjct: 127 KFKERILNDDEFARQYGDLGNVYGKQWRDWEDKDGNHYDQLKTVIEQIKTNPNSRRHIVS 186 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I+ MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 187 AWNPTEIETMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKE 246 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT GD H+Y+NH + QLSR P + IN + + YED + Sbjct: 247 CGLEVGEFVHTFGDAHIYSNHMSAIETQLSRESYKAPTLQINSD-KSIFDINYEDLEIVD 305 Query: 252 YEPHAAILAKVSV 264 YE H AI A ++V Sbjct: 306 YESHPAIKAPIAV 318 >gi|186702039|gb|ACC91331.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 624 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 623 >gi|114053279|ref|NP_001040281.1| thymidylate synthase isoform 1 [Bombyx mori] gi|87248619|gb|ABD36362.1| thymidylate synthase isoform 1 [Bombyx mori] Length = 298 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 134/284 (47%), Positives = 176/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60 +QYL L+ +IK G R DRTGVGT S FG R+ L + PLLTTK+V + V+ ELL Sbjct: 15 YQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIEELL 74 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS-------- 100 W + G ++ L GV IWD ++ G+LGP+YG QWR Sbjct: 75 WMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKYIDC 134 Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+ S++ S++ +P RR ++ AWN + + KMALPPCHCL QFYV +GKLS Sbjct: 135 QTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFYVADGKLS 194 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASYSLLT M+A V G+Q GEFIHT GD H+Y NH E +QL Sbjct: 195 CLLYQRSADMGLGVPFNIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPLKIQL 254 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P+ P + I + F+YEDF ++ Y+PH I +++V Sbjct: 255 QREPKQFPTLEFARKIESIDDFKYEDFIIKDYKPHPKIEMEMAV 298 >gi|303387989|ref|XP_003072229.1| bifunctional dihydrofolate reductase-thymidylate synthase [Encephalitozoon intestinalis ATCC 50506] gi|303388249|ref|XP_003072359.1| thymidylate synthase [Encephalitozoon intestinalis ATCC 50506] gi|303301368|gb|ADM10869.1| bifunctional dihydrofolate reductase-thymidylate synthase [Encephalitozoon intestinalis ATCC 50506] gi|303301498|gb|ADM10999.1| thymidylate synthase [Encephalitozoon intestinalis ATCC 50506] Length = 294 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 138/285 (48%), Positives = 185/285 (64%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDL+ H+++ G R+DRTG GT S FG MRF L FPLLTTK+V +K +V ELL Sbjct: 10 HQYLDLIAHILEKGVKRQDRTGTGTLSIFGASMRFSLEDNTFPLLTTKRVFYKGIVEELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWRSWP------- 102 +FLR ++ + L + GV IW + K +G+LGPIYG QWR + Sbjct: 70 FFLRAQTDSAILEKKGVMIWKKNGSKQFLQSMGLDREEGDLGPIYGFQWRHFGAEYQTSS 129 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G IDQI +++S++ +P SRR +V AWN + KMALPPCH LFQF V +GKL+C Sbjct: 130 SDYKGQGIDQIRDVIESIKNNPESRRMVVCAWNPLALPKMALPPCHVLFQFNVMDGKLNC 189 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRSGD+ LG+PFNIASYSLLT+++A + G + GEF+H LGD H+Y +H + LQL Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTIIIAHLTGLRPGEFVHFLGDAHVYLDHIDSLRLQLQ 249 Query: 222 RSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+PR P++ +NP ++ F +EDF L Y PH I +SV Sbjct: 250 RTPREFPKLFVNPKGTRVEIEDFEFEDFELVGYNPHPPIQMNMSV 294 >gi|6226856|sp|O02604|DRTS_PLAVI RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|2266747|emb|CAA66805.1| dihydrofolate reductase-thymidylate synthetase [Plasmodium vivax] Length = 623 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 341 YQYLGIIYDIIMNGNKQGDRTGVGVMSNFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 400 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 401 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 460 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 461 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 520 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 521 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 580 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 581 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 622 >gi|300508797|pdb|3NRR|A Chain A, Co-Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Babesia Bovis With Dump, Raltitrexed And Nadp gi|300508798|pdb|3NRR|B Chain B, Co-Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Babesia Bovis With Dump, Raltitrexed And Nadp Length = 515 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 129/281 (45%), Positives = 178/281 (63%), Gaps = 20/281 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+L V+ G + +RTG S FGYQMRFDLS+ FPLLTTKKV +S++ ELLWF Sbjct: 234 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 293 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSWP-------- 102 ++G +N + L V IW+ ++ DK+G +LGPIYG QWR + Sbjct: 294 IKGSTNGNDLLAKNVRIWELNGRRDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHA 353 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G IDQ++ I+ ++ +P RR IV +WNV+ + KMALPPCHC FQFYV + KLSC Sbjct: 354 DYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 413 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYS+LT M+A V G GEF+H L D H+Y +H + Q++R Sbjct: 414 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 473 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P P++ +NP+I ++ F +D + Y H I +S Sbjct: 474 IPHPFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMS 514 >gi|294655762|ref|XP_002770180.1| DEHA2C06094p [Debaryomyces hansenii CBS767] gi|199430584|emb|CAR65545.1| DEHA2C06094p [Debaryomyces hansenii] Length = 316 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 131/307 (42%), Positives = 178/307 (57%), Gaps = 44/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 YLDL +I G R DRTG GT+S F Q+RF+LS FPLLTTKKV ++++HEL Sbjct: 10 QTYLDLCERIINEGEHRPDRTGTGTKSLFAPPQLRFNLSDDTFPLLTTKKVFSRAIIHEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF++G ++ L GV IW+ ++ G+LGP+YG QWR + Sbjct: 70 LWFVQGCTDAKKLSEKGVKIWEGNGSREYLDSIGLTDRREGDLGPVYGFQWRHFGAEYKD 129 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ+ +++ L+ +PY RR I+SAWN KMALPPCH QFYV+ Sbjct: 130 CDADYSGQGVDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPNE 189 Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++ GEFIH Sbjct: 190 TPDSNTNKQQKTSSRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIH 249 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMII----NPNIVDLLSFRYEDFTLRSYEPHAA 257 TLGD H+Y +H + QL R+P+ P++II I + F++EDF + Y+P+ Sbjct: 250 TLGDAHVYLDHVDALKEQLVRTPKDFPKLIIKEERKDEIKSIDDFKFEDFEIIGYDPYGP 309 Query: 258 ILAKVSV 264 I K+SV Sbjct: 310 IKMKMSV 316 >gi|322488320|emb|CBZ23567.1| dihydrofolate reductase-thymidylate synthase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 520 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 126/286 (44%), Positives = 168/286 (58%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIAKEDRTGVGTLSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD ++ +LGP+YG QWR + Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENTEMDLGPVYGFQWRHFGAEYRGL 354 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-- 158 +YDG +DQI IV++++A+P RR + +AWN + KMALPPCH L QFYV+ K Sbjct: 355 EANYDGEGVDQIKFIVETIKANPNDRRLLFTAWNPCALHKMALPPCHLLAQFYVNTEKSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y +H Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRSHIGALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH AI ++V Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELMDMEVIDYVPHPAIKMDMAV 520 >gi|22003396|gb|AAM88659.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] Length = 520 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 128/285 (44%), Positives = 170/285 (59%), Gaps = 23/285 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 294 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD +K+ +LGP+YG QWR + Sbjct: 295 WFLRGETNAXLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI IV++++A+P RR +V+AWN + KMALPPCH L QFYV D + Sbjct: 355 EANYDGEGVDQIRFIVETIKANPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH + Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 QL R P P +I L + D + Y PH I +++ Sbjct: 475 QLERVPHAFPTLIFKAERQFLEDYELTDMEVIDYVPHPPIKMEMA 519 >gi|42519343|ref|NP_965273.1| thymidylate synthase [Lactobacillus johnsonii NCC 533] gi|62901341|sp|Q74IU3|TYSY_LACJO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|41583631|gb|AAS09239.1| thymidylate synthase [Lactobacillus johnsonii NCC 533] Length = 318 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 179/313 (57%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ + + ELLW Sbjct: 6 QPYLDLLSKIMSEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L H IWDEWA Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVESNEYQGPDMTNFGLRSQQDPEFKRIYQEEMK 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR W +G IDQI +++ ++ PYSRR IVS Sbjct: 126 KFDQKVLEDQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV++G LS QLYQRSGD+FLG+PFNIASY+LL ++A Sbjct: 186 AWNPEDVPTSALPPCHVLFQFYVNDGCLSLQLYQRSGDMFLGVPFNIASYALLVNLVARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHTLGD H+Y NHF Q L+RS P + +NP+ + F +D L + Sbjct: 246 TGLKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLIN 305 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 306 YRHHGTIKAPVAV 318 >gi|146071663|ref|XP_001463169.1| dihydrofolate reductase-thymidylate synthase [Leishmania infantum] Length = 395 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 128/286 (44%), Positives = 170/286 (59%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 110 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 169 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD +K+ +LGP+YG QWR + Sbjct: 170 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 229 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI SIV++++A+P RR + +AWN + KMALPPCH L QFYV D + Sbjct: 230 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 289 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH Sbjct: 290 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 349 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P P ++ L + D + Y PH I +++V Sbjct: 350 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 395 >gi|268319281|ref|YP_003292937.1| hypothetical protein FI9785_796 [Lactobacillus johnsonii FI9785] gi|262397656|emb|CAX66670.1| thyA [Lactobacillus johnsonii FI9785] Length = 318 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 141/313 (45%), Positives = 179/313 (57%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL ++ G D+ DRTG GTRS FG QMRFDL+ GFP+LTTK++ + + ELLW Sbjct: 6 QPYLDLLSKIMNEGHDKEDRTGTGTRSLFGVQMRFDLNDGFPILTTKEIPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L H IWDEWA Sbjct: 66 FLRGDTNIRFLLEHNNHIWDEWAFKNWVESSDYQGPDMTNFGLRSQEDPEFKKIYQEEMK 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G LG +YG QWR W G IDQI +++ ++ PYSRR IVS Sbjct: 126 KFDEKVLADQTFAEKYGNLGDVYGAQWRHWQKRGGGFIDQIQNVIDQIKTTPYSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL ++A Sbjct: 186 AWNPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLIACE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEFIHTLGD H+Y NHF Q L+RS P + +NP+ + F +D L + Sbjct: 246 TGLKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLIN 305 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 306 YRHHGTIKAPVAV 318 >gi|330684989|gb|EGG96664.1| thymidylate synthase [Staphylococcus epidermidis VCU121] Length = 318 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 143/311 (45%), Positives = 187/311 (60%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L ++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILNIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIKYLLQYNNNIWNEWAFENYINSEDYHGPDMTNFGHRSLQDSEFNELYKAEMKKF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN DQ+ ++++ ++ P SRRHIVSAW Sbjct: 129 KENILNDDAFAQKYGDLGNVYGKQWRDWEDKDGNHFDQLKTVIEQIKQHPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH + + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFVHTFGDAHIYSNHMDAVETQLSRDSFNPPQIKINTD-KSIFDIEYEDIELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|328352748|emb|CCA39146.1| thymidylate synthase [Pichia pastoris CBS 7435] Length = 296 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 130/290 (44%), Positives = 175/290 (60%), Gaps = 27/290 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 YLDL +IK G R DRTG GT S F Q+RF+L G FPLLTTKK K ++HEL Sbjct: 7 QAYLDLCVRIIKEGEHRPDRTGTGTYSLFAPPQLRFNLRDGQFPLLTTKKTFVKGIIHEL 66 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++ G+LGP+YG QWR + Sbjct: 67 LWFVEGCTDGKKLSEKGVRIWEGNGSREYLDSLGLKDREVGDLGPVYGFQWRHFGAQYKD 126 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ+S ++++LR +PY RR I+SAWN +KMALPPCH FYV Sbjct: 127 CKTDYTGQGFDQLSRVIETLRTNPYDRRIIMSAWNPPDFEKMALPPCHVFCHFYVSFPKD 186 Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 +LSC +YQRS D+ LG+PFN+ASY+LLT M+A V+ G+FIHT+GD H+Y +H + Sbjct: 187 KKPELSCLMYQRSCDMGLGVPFNVASYALLTKMIAHVVDMDCGDFIHTMGDAHVYLDHVD 246 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Q R P+ P + IN N D+ F++EDF + +Y+PH I K+SV Sbjct: 247 ALKVQAERIPKKFPTLRINTNTKDIDGFKFEDFQIDNYDPHPPIKMKMSV 296 >gi|223043144|ref|ZP_03613191.1| thymidylate synthase [Staphylococcus capitis SK14] gi|222443355|gb|EEE49453.1| thymidylate synthase [Staphylococcus capitis SK14] Length = 318 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 140/313 (44%), Positives = 185/313 (59%), Gaps = 51/313 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLW Sbjct: 7 KAYHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLW 66 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 F++GD+N+ YL ++ +IW+EWA ++ Sbjct: 67 FIKGDTNIQYLLKYNNNIWNEWAFENYVNSEDYQGPDMTNFGHRSQEDPEFNEQYKEEMK 126 Query: 88 ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 G+LG +YG QWR W D DGN DQ+ ++++ ++ +P SRRHIVS Sbjct: 127 KFKERILNDDEFARQYGDLGNVYGKQWRDWEDKDGNHFDQLKTVIEQIKTNPNSRRHIVS 186 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I+ MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 187 AWNPTEIETMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKE 246 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 + GEF+HT GD H+Y+NH + QLSR P + IN + + YED + Sbjct: 247 CELEVGEFVHTFGDAHIYSNHMSAIETQLSRESYKAPTLQINSD-KSIFDINYEDLEIVD 305 Query: 252 YEPHAAILAKVSV 264 YE H AI A ++V Sbjct: 306 YESHPAIKAPIAV 318 >gi|268568852|ref|XP_002640365.1| Hypothetical protein CBG20269 [Caenorhabditis briggsae] gi|187023537|emb|CAP37322.1| hypothetical protein CBG_20269 [Caenorhabditis briggsae AF16] Length = 315 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 120/283 (42%), Positives = 174/283 (61%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELLW 61 +YL + +++ GS R DRTG GT S FG Q ++ L PLLTTK+V+WK V+ ELLW Sbjct: 33 KYLKQVEQILQEGSRRDDRTGTGTISIFGMQSKYSLRNDTIPLLTTKRVYWKGVLEELLW 92 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G ++ L V IW++ D ++G+LGP+YG QWR + Sbjct: 93 FISGSTDGKLLMAKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDCH 152 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G IDQ++ +++ ++ +P SRR I+SAWN + + +M LPPCH + QFYVDNG+LSC Sbjct: 153 TDYTGQGIDQLAEVIRQIKEEPDSRRIILSAWNPSELGQMVLPPCHTMCQFYVDNGELSC 212 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFN+ASY LLT M+A V G + G +HTLGD H+Y+NH + Q+ Sbjct: 213 QLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKAGTLVHTLGDAHVYSNHVDALKTQME 272 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P++ ++ + F + L Y+ H I+ ++V Sbjct: 273 REPYAFPKIRFTRDVSSIDDFTSDMIVLEDYKCHGKIVMDMAV 315 >gi|332016288|gb|EGI57201.1| Thymidylate synthase [Acromyrmex echinatior] Length = 513 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 134/284 (47%), Positives = 180/284 (63%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL L+ VI+ G+ + +RT + T S FG QMRF L G FPLLTTK+V W++V+ ELL Sbjct: 230 YQYLRLIEKVIQSGAKKSNRTAMDTYSIFGAQMRFSLRDGVFPLLTTKQVFWRAVIEELL 289 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF++G +N L G+ IWDE ++G+LGP+YG QWR + Sbjct: 290 WFIKGSTNSKELSDKGIHIWDENGSRAFLDSCDFTDREEGDLGPVYGFQWRHFGAEYKDM 349 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+ ++ ++ P RR I+SAWN I KMALPPCH L QFYV+NG+LS Sbjct: 350 HTDYTGQGIDQLKEVIHKVKHSPEDRRIIISAWNPIDIPKMALPPCHTLVQFYVNNGELS 409 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH + Q+ Sbjct: 410 TQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEKQV 469 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I + D+ F EDF L Y P++ + K++V Sbjct: 470 KREPREFPKLRIVREVKDIDDFITEDFKLIDYNPYSKLYMKMAV 513 >gi|254572255|ref|XP_002493237.1| Thymidylate synthase, required for de novo biosynthesis of pyrimidine deoxyribonucleotides [Pichia pastoris GS115] gi|238033035|emb|CAY71058.1| Thymidylate synthase, required for de novo biosynthesis of pyrimidine deoxyribonucleotides [Pichia pastoris GS115] Length = 298 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 130/290 (44%), Positives = 175/290 (60%), Gaps = 27/290 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 YLDL +IK G R DRTG GT S F Q+RF+L G FPLLTTKK K ++HEL Sbjct: 9 QAYLDLCVRIIKEGEHRPDRTGTGTYSLFAPPQLRFNLRDGQFPLLTTKKTFVKGIIHEL 68 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++ G+LGP+YG QWR + Sbjct: 69 LWFVEGCTDGKKLSEKGVRIWEGNGSREYLDSLGLKDREVGDLGPVYGFQWRHFGAQYKD 128 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G DQ+S ++++LR +PY RR I+SAWN +KMALPPCH FYV Sbjct: 129 CKTDYTGQGFDQLSRVIETLRTNPYDRRIIMSAWNPPDFEKMALPPCHVFCHFYVSFPKD 188 Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 +LSC +YQRS D+ LG+PFN+ASY+LLT M+A V+ G+FIHT+GD H+Y +H + Sbjct: 189 KKPELSCLMYQRSCDMGLGVPFNVASYALLTKMIAHVVDMDCGDFIHTMGDAHVYLDHVD 248 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Q R P+ P + IN N D+ F++EDF + +Y+PH I K+SV Sbjct: 249 ALKVQAERIPKKFPTLRINTNTKDIDGFKFEDFQIDNYDPHPPIKMKMSV 298 >gi|224541512|ref|ZP_03682051.1| hypothetical protein CATMIT_00682 [Catenibacterium mitsuokai DSM 15897] gi|224525549|gb|EEF94654.1| hypothetical protein CATMIT_00682 [Catenibacterium mitsuokai DSM 15897] Length = 286 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 139/289 (48%), Positives = 187/289 (64%), Gaps = 34/289 (11%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 + R++++ G DR DRTG GTRS FGYQ R+DL +GFPLLTTKK++ + + ELLWF++GD Sbjct: 1 MCRYILEHGEDRPDRTGTGTRSVFGYQTRYDLREGFPLLTTKKMYLRPIAEELLWFIKGD 60 Query: 67 SNVSYLHRHGVSIWDEWA-----------------------------DKDGELGPIYGVQ 97 +N+ YL V IW+EW K G LGP+YG Q Sbjct: 61 TNIKYLVDRNVKIWNEWPYEDFKKSEDFNGETLEEFVEKIKNDDDFAKKHGNLGPVYGAQ 120 Query: 98 WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 WR++ + DQ+ ++ SL+ +P+SRRHI+SAWN + +D+MALPPCH L QFYV + Sbjct: 121 WRNF---NNEGTDQLMKLIDSLKNNPFSRRHIISAWNPSQVDEMALPPCHTLMQFYVSSD 177 Query: 158 K--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 K LSCQLYQRS D FLG+PFNIASY+LLT MLA V G++ EFIHT+GD H+Y NHF+ Sbjct: 178 KKYLSCQLYQRSADTFLGVPFNIASYALLTCMLAQVCGYEPKEFIHTIGDAHIYKNHFDV 237 Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+ R P LP++++N +I +L F+ ED L Y+ H + KVSV Sbjct: 238 VKTQIEREPLPLPRLVLNKDIDNLFDFKIEDIKLEGYQSHGPLKGKVSV 286 >gi|146231201|gb|ABQ12770.1| unknown [Shrimp white spot syndrome virus] Length = 289 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 133/285 (46%), Positives = 180/285 (63%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL+L+R +++ G + DRTG GT S FG QMRF L P+LTTKK+ W+ VV ELL Sbjct: 5 HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELL 64 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+RG+++ L + + IW+ ++ G+LGP+YG QWR + Sbjct: 65 WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGSQWRHFGAEYDTC 124 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+++I+++LR +P RR I++AWN + MALPPCH QFYV NG+LS Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGDV LG+P NIASYSLLT ++AS+ G + GEFI TLGD H+YN H E QL Sbjct: 185 CQLYQRSGDVGLGVPSNIASYSLLTHLMASMAGLKPGEFILTLGDAHIYNTHIEVLKKQL 244 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA-ILAKVSV 264 R PR P++ I + F + F L Y+PH+ + K++V Sbjct: 245 CRVPRPFPKLRILMAPKKIEDFTIDMFYLEGYQPHSGNLQMKMAV 289 >gi|1674210|gb|AAB96164.1| thymidylate synthase [Mycoplasma pneumoniae M129] Length = 328 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 137/293 (46%), Positives = 189/293 (64%), Gaps = 35/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL R+V++ G R +RT FGYQM FD+SK FPLLTTKKVHWKS+VHELL Sbjct: 42 MQQYLDLARYVLEHGKYRPNRTDTAGIGVFGYQMHFDISKHFPLLTTKKVHWKSIVHELL 101 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91 WF++GD+N+ YL + V+IW+EW + G LG Sbjct: 102 WFIKGDTNIKYLVDNKVNIWNEWPYESFKKSPHFNGESQKEFIERIRQDAKFAQQFGNLG 161 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + N +DQ+ ++ ++ +P+SRR IVS+WN +D+M LPPCH L+Q Sbjct: 162 PVYGKQWRDF-----NGVDQLKKVIAQIKVNPFSRRLIVSSWNPNEVDQMLLPPCHSLYQ 216 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV +G+LSCQLYQRSGD+FLGIPFNIASYSLL ++A + G F+HT+GD H+Y N Sbjct: 217 FYVQDGQLSCQLYQRSGDIFLGIPFNIASYSLLVYLVAKETNLKPGSFVHTIGDAHIYEN 276 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ LQL+R P+ LP++++ + + ++++D L Y+ H I +V+V Sbjct: 277 HLEQIKLQLTRQPKPLPKVVLKSD-KSIFDYQFDDIELVDYDHHPTIKGEVAV 328 >gi|156084246|ref|XP_001609606.1| dihydrofolate reductase/thymidilate synthase [Babesia bovis] gi|256032857|pdb|3I3R|A Chain A, X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE SYNTHASE From Babesia Bovis At 2.35a Resolution gi|256032858|pdb|3I3R|B Chain B, X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE SYNTHASE From Babesia Bovis At 2.35a Resolution gi|261278903|pdb|3K2H|A Chain A, Co-Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE Synthase From Babesia Bovis With Dump, Pemetrexed And Nadp gi|261278904|pdb|3K2H|B Chain B, Co-Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE Synthase From Babesia Bovis With Dump, Pemetrexed And Nadp gi|268612472|pdb|3KJR|A Chain A, Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE SYN Babesia Bovis Determined Using Slipchip Based Microfluidics gi|268612473|pdb|3KJR|B Chain B, Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE SYN Babesia Bovis Determined Using Slipchip Based Microfluidics gi|154796858|gb|EDO06038.1| dihydrofolate reductase/thymidylate synthase [Babesia bovis] Length = 511 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 129/281 (45%), Positives = 178/281 (63%), Gaps = 20/281 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+L V+ G + +RTG S FGYQMRFDLS+ FPLLTTKKV +S++ ELLWF Sbjct: 230 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 289 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSWP-------- 102 ++G +N + L V IW+ ++ DK+G +LGPIYG QWR + Sbjct: 290 IKGSTNGNDLLAKNVRIWELNGRRDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHA 349 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G IDQ++ I+ ++ +P RR IV +WNV+ + KMALPPCHC FQFYV + KLSC Sbjct: 350 DYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 409 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRS D+ LG+PFNIASYS+LT M+A V G GEF+H L D H+Y +H + Q++R Sbjct: 410 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 469 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P P++ +NP+I ++ F +D + Y H I +S Sbjct: 470 IPHPFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMS 510 >gi|99030335|gb|ABF61433.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 121/282 (42%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTG G S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGAGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKSVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLENVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617 >gi|17158171|ref|NP_477589.1| wsv067 [Shrimp white spot syndrome virus] gi|15021446|gb|AAK77723.1|AF369029_54 ORF54, putative thymidylate synthase [shrimp white spot syndrome virus] gi|17016465|gb|AAL33071.1| wsv067 [shrimp white spot syndrome virus] Length = 289 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 134/285 (47%), Positives = 182/285 (63%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL+L+R +++ G + DRTG GT S FG QMRF L P+LTTKK+ W+ VV ELL Sbjct: 5 HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELL 64 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+RG+++ L + + IW+ ++ G+LGP+YG QWR + Sbjct: 65 WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGFQWRHFGAEYDTC 124 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+++I+++LR +P RR I++AWN + MALPPCH QFYV NG+LS Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGDV LG+PFNIASYSLLT ++AS++G + GEFI TLGD H+YN H E QL Sbjct: 185 CQLYQRSGDVGLGVPFNIASYSLLTHLMASMVGLKPGEFILTLGDAHIYNTHIEVLKKQL 244 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA-ILAKVSV 264 R PR P++ I + F + F L Y+PH+ + K++V Sbjct: 245 CRVPRPFPKLRILMAPEKIEDFTIDMFYLEGYQPHSGNLQMKMAV 289 >gi|239636892|ref|ZP_04677891.1| thymidylate synthase [Staphylococcus warneri L37603] gi|239597566|gb|EEQ80064.1| thymidylate synthase [Staphylococcus warneri L37603] Length = 318 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 145/311 (46%), Positives = 189/311 (60%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L ++K G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILKIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIKYLLQYNNNIWNEWAFENYINSEDYHGPDMTNFGHRSLQDSEFNELYKAEMKKF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DGN +DQ+ ++++ ++ P SRRHIVSAW Sbjct: 129 KENILNDDTFAQKYGDLGNVYGKQWRDWEDKDGNHVDQLKTVIEQIKQHPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAVETQLSRDSFNPPQIKINTD-KSIFDINYEDIELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|154331155|ref|XP_001562017.1| dihydrofolate reductase-thymidylate synthase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059339|emb|CAM37041.1| dihydrofolate reductase-thymidylate synthase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 521 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 125/286 (43%), Positives = 173/286 (60%), Gaps = 23/286 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVG S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 236 RQYLELIDRIMKTGIAKEDRTGVGILSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 295 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD A+K+ +LGP+YG QWR + Sbjct: 296 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTANKEMDLGPVYGFQWRHFGAQYKGF 355 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158 +YDG +DQI SIV++++ +P RR +++AWN + +MALPPCH L QFYV D + Sbjct: 356 EANYDGEGVDQIKSIVETIKVNPNDRRLLLTAWNPCALHEMALPPCHLLAQFYVNTDAKE 415 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y NH + + Sbjct: 416 LSCMLYQRSCDMGLGVPFNIASYALLTILMAKATGLRPGELVHTLGDAHVYRNHIDALKV 475 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+P P ++ L + D + Y P+ I +++V Sbjct: 476 QLERTPNAFPTLVFKREREFLEDYELSDMEVIDYAPYPPIKMEMAV 521 >gi|99030331|gb|ABF61431.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + + ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGKIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617 >gi|99082919|gb|ABF66633.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 121/282 (42%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MAL PCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALLPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617 >gi|116617576|ref|YP_817947.1| thymidylate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272223|sp|Q03YZ8|TYSY_LEUMM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116096423|gb|ABJ61574.1| thymidylate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 322 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 133/317 (41%), Positives = 178/317 (56%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + ++ GS + DRTG GTRS FG QMRF+L++GFPLLTTKKV + + ELLW Sbjct: 6 QQYLDLAQKILDEGSHKGDRTGTGTRSLFGTQMRFNLAEGFPLLTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L H IWDEW Sbjct: 66 FLRGDNNIRFLLEHNNHIWDEWAFKKWIESDKYTGPDMTNFGLRSQTDENFAKIYKEQKD 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127 ++ G +G +YG WRSW +DQ++ ++ ++ P SRR Sbjct: 126 IFVNNILNDDEFKEEFGYIGNVYGKLWRSWETNSLTAGDETVDQVARLIDQIKETPNSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS Q+YQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSLQMYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ GEFIHT+GD H+YNNH +Q QLSR LP++ +NP + L + +D Sbjct: 246 VAAQTGYEVGEFIHTIGDTHIYNNHVDQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + Y+ AI A V+V Sbjct: 306 KILDYDSEPAIKAPVAV 322 >gi|227432568|ref|ZP_03914549.1| thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351676|gb|EEJ41921.1| thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 322 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 133/317 (41%), Positives = 179/317 (56%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL ++++ GS + DRTG GTRS FG QMRF+L++GFPLLTTKKV + + ELLW Sbjct: 6 QQYLDLAQNILDEGSHKGDRTGTGTRSLFGTQMRFNLAEGFPLLTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L H IWDEW Sbjct: 66 FLRGDNNIRFLLEHNNHIWDEWAFKKWIESDKYTGPDMTNFGLRSQTDENFAKIYKEQKD 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127 ++ G +G +YG WRSW +DQ++ ++ ++ P SRR Sbjct: 126 IFVNNILNDDEFKEEFGYIGNVYGKLWRSWETNSLTAGDETVDQVARLIDQIKETPNSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS Q+YQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSLQMYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ GEFIHT+GD H+YNNH +Q QLSR LP++ +NP + L + +D Sbjct: 246 VAAQTGYEVGEFIHTIGDTHIYNNHVDQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + Y+ AI A V+V Sbjct: 306 KILDYDSEPAIKAPVAV 322 >gi|295798079|emb|CAX68899.1| Thymidylate synthase [uncultured bacterium] Length = 271 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 135/273 (49%), Positives = 177/273 (64%), Gaps = 11/273 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G + DRTG GT S FGYQ ++DL +GFP+LTTKKV + +VV ELL Sbjct: 1 MKQYLDLVRDILTHGEKKEDRTGTGTISLFGYQSKYDLRQGFPILTTKKVLFDAVVWELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD---------YDGNVIDQ 111 WFLRG +N++ + IW+ WAD GELGP+YG QWR W Y IDQ Sbjct: 61 WFLRGSTNINDDLKAHTPIWNAWADAQGELGPVYGYQWRKWEKFVWDEKARAYQKKHIDQ 120 Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 I+ ++++++ +P SRR IVSAWNV+ ID+MALPPCH FQFYV NG+L CQLYQRS DV Sbjct: 121 ITEVIETIKKNPNSRRLIVSAWNVSDIDRMALPPCHAFFQFYVVNGRLDCQLYQRSADVA 180 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LL ++A G F HTLGD H+Y NH + QL R+P+ L + Sbjct: 181 LGVPFNIASYALLMSLVAKECSLTPGIFTHTLGDAHIYLNHIDGIKQQLERAPKPLALLQ 240 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +L R+ED L Y+ I ++V Sbjct: 241 L--ACKRVLECRFEDIKLIGYQHDPFIKFPIAV 271 >gi|260950885|ref|XP_002619739.1| thymidylate synthase [Clavispora lusitaniae ATCC 42720] gi|238847311|gb|EEQ36775.1| thymidylate synthase [Clavispora lusitaniae ATCC 42720] Length = 317 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 133/308 (43%), Positives = 173/308 (56%), Gaps = 45/308 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 YLDL + +I+ G R DRTG GTRS F Q+RFDLS FPLLTTK+V K ++HEL Sbjct: 10 QAYLDLCQKIIEEGEFRPDRTGTGTRSLFAPPQLRFDLSNDTFPLLTTKRVFSKGIIHEL 69 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IW+ ++ G+LGP+YG QWR + Sbjct: 70 LWFVEGCTDAKKLSAKGVRIWEGNGSREYLDKMGLTDRREGDLGPVYGFQWRHFGAEYKT 129 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154 DY G DQ+ +++ L+ +PY RR I+SAWN KMALPPCH QFYV Sbjct: 130 CDDDYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFCQFYVSFPQP 189 Query: 155 --------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+ GEFI Sbjct: 190 SSPEPYAPKSTKSQARPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFI 249 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMII----NPNIVDLLSFRYEDFTLRSYEPHA 256 HTLGD H+Y +H + QL R+P+ P++ I I + F ++DF + YEP Sbjct: 250 HTLGDAHVYLDHIDALKTQLERTPKQFPKLFIKESRKDEIRSIDDFTFDDFEIVGYEPLP 309 Query: 257 AILAKVSV 264 AI +SV Sbjct: 310 AIKMNMSV 317 >gi|309807223|ref|ZP_07701195.1| thymidylate synthase [Lactobacillus iners LactinV 03V1-b] gi|312875520|ref|ZP_07735523.1| thymidylate synthase [Lactobacillus iners LEAF 2053A-b] gi|315653456|ref|ZP_07906377.1| thymidylate synthase [Lactobacillus iners ATCC 55195] gi|325911481|ref|ZP_08173892.1| thymidylate synthase [Lactobacillus iners UPII 143-D] gi|325912868|ref|ZP_08175246.1| thymidylate synthase [Lactobacillus iners UPII 60-B] gi|329921037|ref|ZP_08277562.1| thymidylate synthase [Lactobacillus iners SPIN 1401G] gi|308166361|gb|EFO68568.1| thymidylate synthase [Lactobacillus iners LactinV 03V1-b] gi|311089031|gb|EFQ47472.1| thymidylate synthase [Lactobacillus iners LEAF 2053A-b] gi|315489147|gb|EFU78788.1| thymidylate synthase [Lactobacillus iners ATCC 55195] gi|325476681|gb|EGC79836.1| thymidylate synthase [Lactobacillus iners UPII 143-D] gi|325477861|gb|EGC80995.1| thymidylate synthase [Lactobacillus iners UPII 60-B] gi|328935107|gb|EGG31592.1| thymidylate synthase [Lactobacillus iners SPIN 1401G] Length = 318 Score = 331 bits (850), Expect = 5e-89, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V + + ELLW Sbjct: 6 QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L H IWDEW Sbjct: 66 FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMK 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + K G+LG +YG QWR W G+ IDQ+ ++++ ++ +P SRR IVS Sbjct: 126 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q + QLSR+ P + +NP +L F +D L Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLID 305 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 306 YNHHGTIKAPVAV 318 >gi|309809295|ref|ZP_07703164.1| thymidylate synthase [Lactobacillus iners SPIN 2503V10-D] gi|308170408|gb|EFO72432.1| thymidylate synthase [Lactobacillus iners SPIN 2503V10-D] Length = 318 Score = 331 bits (850), Expect = 5e-89, Method: Composition-based stats. Identities = 143/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V + + ELLW Sbjct: 6 QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L H IWDEW Sbjct: 66 FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMK 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + K G+LG +YG QWR W G+ IDQ+ ++++ ++ +P SRR IVS Sbjct: 126 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q + QLSR+ P + +NP +L F +D L Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLID 305 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 306 YNHHGTIKAPVAV 318 >gi|302191399|ref|ZP_07267653.1| thymidylate synthase [Lactobacillus iners AB-1] gi|309805343|ref|ZP_07699393.1| thymidylate synthase [Lactobacillus iners LactinV 09V1-c] gi|309807682|ref|ZP_07701621.1| thymidylate synthase [Lactobacillus iners LactinV 01V1-a] gi|312873927|ref|ZP_07733963.1| thymidylate synthase [Lactobacillus iners LEAF 2052A-d] gi|308165343|gb|EFO67576.1| thymidylate synthase [Lactobacillus iners LactinV 09V1-c] gi|308169056|gb|EFO71135.1| thymidylate synthase [Lactobacillus iners LactinV 01V1-a] gi|311090476|gb|EFQ48884.1| thymidylate synthase [Lactobacillus iners LEAF 2052A-d] Length = 318 Score = 331 bits (850), Expect = 5e-89, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V + + ELLW Sbjct: 6 QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L H IWDEW Sbjct: 66 FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMN 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + K G+LG +YG QWR W G+ IDQ+ ++++ ++ +P SRR IVS Sbjct: 126 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q + QLSR+ P + +NP +L F +D L Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLID 305 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 306 YNHHGTIKAPVAV 318 >gi|259500709|ref|ZP_05743611.1| thymidylate synthase [Lactobacillus iners DSM 13335] gi|259168093|gb|EEW52588.1| thymidylate synthase [Lactobacillus iners DSM 13335] Length = 329 Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V + + ELLW Sbjct: 17 QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLW 76 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L H IWDEW Sbjct: 77 FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMN 136 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + K G+LG +YG QWR W G+ IDQ+ ++++ ++ +P SRR IVS Sbjct: 137 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVS 196 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 197 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 256 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q + QLSR+ P + +NP +L F +D L Sbjct: 257 TGLELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLID 316 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 317 YNHHGTIKAPVAV 329 >gi|229593185|ref|YP_002875304.1| thymidylate synthase [Pseudomonas fluorescens SBW25] gi|259550806|sp|C3K3Q8|TYSY_PSEFS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|229365051|emb|CAY53232.1| thymidylate synthase [Pseudomonas fluorescens SBW25] Length = 277 Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats. Identities = 127/277 (45%), Positives = 179/277 (64%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GT++ F Q R +L+ GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKQYLELLNDVVTNGLTKGDRTGTGTKAVFARQYRHNLADGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L G++N+ +L+ +GV IWDEWA +DG+LGP+YG QW +WP DG I+QI +V +L+ Sbjct: 61 WMLSGNTNIKWLNENGVKIWDEWATEDGDLGPVYGEQWTAWPTKDGGTINQIDYMVHTLK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + K ALPPCH L+Q +V +G LS QLY RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDETKSPQENARNGKQALPPCHLLYQAFVHDGHLSMQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+P+N A+ +LLT MLA E I T GD H Y+NH EQ QL+R+P+ L Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVTTGDTHAYSNHMEQIRTQLARTPKKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+++I + +++EDF + Y+ +I A V++ Sbjct: 241 PELVIKRKPASIYDYKFEDFEIVGYDADPSIKADVAI 277 >gi|309803972|ref|ZP_07698055.1| thymidylate synthase [Lactobacillus iners LactinV 11V1-d] gi|308163974|gb|EFO66238.1| thymidylate synthase [Lactobacillus iners LactinV 11V1-d] Length = 318 Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats. Identities = 143/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V + + ELLW Sbjct: 6 QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L H IWDEW Sbjct: 66 FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMK 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + K G+LG +YG QWR W G+ IDQ+ ++++ ++ +P SRR IVS Sbjct: 126 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHF+Q + QLSR+ P + +NP +L F +D L Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLID 305 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 306 YNHHGTIKAPVAV 318 >gi|221053708|ref|XP_002258228.1| bifunctional dihydrofolate reductase-thymidylate synthase [Plasmodium knowlesi strain H] gi|193808061|emb|CAQ38765.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Plasmodium knowlesi strain H] Length = 626 Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats. Identities = 121/282 (42%), Positives = 180/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L + V IW+ ++ +LGPIYG QWR + Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKIAMEMA 625 >gi|99082907|gb|ABF66627.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMELA 617 >gi|224476558|ref|YP_002634164.1| thymidylate synthase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421165|emb|CAL27979.1| thymidylate synthase [Staphylococcus carnosus subsp. carnosus TM300] Length = 317 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 138/313 (44%), Positives = 191/313 (61%), Gaps = 51/313 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 Y DL + +++ G++R DRT GT S FG+Q+RFDLS+GFPLLTTKKV +K + EL+W Sbjct: 6 KAYHDLCKEILEIGNERDDRTHTGTISKFGHQLRFDLSEGFPLLTTKKVSFKLLATELVW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL ++ +IW+EWA Sbjct: 66 FIKGDTNIKYLLQYNNNIWNEWAFEKYIQSEDYTGPDMTNFGHRALQDLEFNERYQEEMD 125 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 +K G+LG +YG QWR W DG DQ++++++ ++ P SRRHIVS Sbjct: 126 KFKKKILNDDAFAEKHGDLGNVYGKQWRDWVGADGKHYDQLATVIKQIKKHPTSRRHIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASYSLLT ++A Sbjct: 186 AWNPSEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYSLLTHLVAKE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT GD H+Y+NH + + QLSR PQ+ IN + + +YED + + Sbjct: 246 CGLEVGEFVHTFGDAHIYSNHIDAIEKQLSRDSYAPPQLKINTD-KSIFEIQYEDLEIVN 304 Query: 252 YEPHAAILAKVSV 264 Y+ H I A ++V Sbjct: 305 YQSHPGIKAPIAV 317 >gi|99082909|gb|ABF66628.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 331 bits (848), Expect = 8e-89, Method: Composition-based stats. Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREANDLGPIYGFQWRHFGAEYTNMH 455 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLVKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHADSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617 >gi|99082917|gb|ABF66632.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 331 bits (848), Expect = 8e-89, Method: Composition-based stats. Identities = 121/282 (42%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S GY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKCGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617 >gi|312871389|ref|ZP_07731484.1| thymidylate synthase [Lactobacillus iners LEAF 3008A-a] gi|311093042|gb|EFQ51391.1| thymidylate synthase [Lactobacillus iners LEAF 3008A-a] Length = 318 Score = 331 bits (848), Expect = 9e-89, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 184/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V + + ELLW Sbjct: 6 QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L H IWDEW Sbjct: 66 FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQNDELFNIKYQEQMK 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + K G+LG +YG QWR W G+ IDQ+ +I++ ++ +P SRR IVS Sbjct: 126 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNIIEQIKTNPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHFEQ + QLSR+ P + +NP +L F +D L Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFEQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLID 305 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 306 YNHHGTIKAPVAV 318 >gi|310799823|gb|EFQ34716.1| thymidylate synthase [Glomerella graminicola M1.001] Length = 325 Score = 331 bits (848), Expect = 9e-89, Method: Composition-based stats. Identities = 125/304 (41%), Positives = 172/304 (56%), Gaps = 41/304 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R +++ G R DRTG GT S F ++F L+K PLLTTK+V ++V+ Sbjct: 22 YQYLDLVREILEEGEHRPDRTGTGTYSIFAPAPLKFSLNKNGKPLLPLLTTKRVFLRAVI 81 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102 ELLWF+ G+++ L GV IWD ++ G+LGP+YG QWR + Sbjct: 82 AELLWFVEGNTSSLPLSEAGVKIWDGNGSREFLDSVGLSHREVGDLGPVYGFQWRHFGAE 141 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQ++ ++ L+ +PY RR ++SAWN A + KMALPPCH QFYV Sbjct: 142 YVDAKTDYTGQGVDQLAEVIHKLKTNPYDRRILLSAWNPADLKKMALPPCHMFAQFYVSY 201 Query: 156 -------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 G L CQLYQRS D+ LG+PFNIASY+LLT M+A G H Sbjct: 202 PRARSAPADGEKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIARACDLVPGSLTHV 261 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILA 260 +GD H+Y +H + +QL R PR P + IN + +R EDF ++ Y+PH I Sbjct: 262 MGDAHVYADHVDALKVQLEREPRDFPLLEINNREAGCSIDGWRVEDFVVKGYDPHKTIAM 321 Query: 261 KVSV 264 K+SV Sbjct: 322 KMSV 325 >gi|73662621|ref|YP_301402.1| thymidylate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123734223|sp|Q49XN8|TYSY_STAS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|72495136|dbj|BAE18457.1| thymidylate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 318 Score = 331 bits (848), Expect = 9e-89, Method: Composition-based stats. Identities = 140/313 (44%), Positives = 183/313 (58%), Gaps = 51/313 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 Y L +++ G + DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K + ELLW Sbjct: 7 QAYHQLCEEILEIGKQKNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLW 66 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 F++GD+N+ YL ++ +IW+EWA Sbjct: 67 FIKGDTNIKYLLQYNNNIWNEWAFEKFVQSKDYNGPDMTDFGHRAQKDESFNLIYKDEMN 126 Query: 85 -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 K G+LG +YG QWR W D GN DQ+ +++ ++ +P SRRHIVS Sbjct: 127 QFKKRILNDDDFAKKYGDLGNVYGKQWRDWEDKYGNHYDQLKTVINQIKTNPNSRRHIVS 186 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASYSLLT ++A Sbjct: 187 AWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKE 246 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HT GD H+Y+NH E + QL+R P + IN + + YED + Sbjct: 247 CGLEVGEFVHTFGDAHIYSNHIEAIETQLARESYNPPTLNINSD-ASIFDIDYEDLEIVD 305 Query: 252 YEPHAAILAKVSV 264 YE H AI A ++V Sbjct: 306 YESHPAIKAPIAV 318 >gi|312963676|ref|ZP_07778157.1| Thymidylate synthase [Pseudomonas fluorescens WH6] gi|311282185|gb|EFQ60785.1| Thymidylate synthase [Pseudomonas fluorescens WH6] Length = 277 Score = 331 bits (848), Expect = 9e-89, Method: Composition-based stats. Identities = 128/277 (46%), Positives = 179/277 (64%), Gaps = 13/277 (4%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+LL V+ G + DRTG GT++ F Q R +L+ GFPLLTTKK+H+KS+ +EL+ Sbjct: 1 MKQYLELLNDVVTNGLTKGDRTGTGTKAVFARQYRHNLADGFPLLTTKKLHFKSIANELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W L G++N+ +L+ +GV IWDEWA +DG+LGP+YG QW +WP DG I+QI +V +L+ Sbjct: 61 WMLSGNTNIKWLNENGVRIWDEWATEDGDLGPVYGEQWTAWPTKDGGTINQIDYMVHTLK 120 Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +P SRR + WNV + K ALPPCH L+Q +V +G LS QLY RS Sbjct: 121 TNPNSRRILFHGWNVEYLPDETKSPQENARNGKQALPPCHLLYQAFVHDGHLSMQLYIRS 180 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DVFLG+P+N A+ +LLT MLA E I T GD H Y+NH EQ QL+R+P+ L Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVTTGDTHAYSNHMEQIRTQLARTPKKL 240 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+++I + +++EDF + YE +I A V++ Sbjct: 241 PELVIKRKPESIYDYKFEDFEIVGYEADPSIKADVAI 277 >gi|146412684|ref|XP_001482313.1| thymidylate synthase [Meyerozyma guilliermondii ATCC 6260] gi|146393077|gb|EDK41235.1| thymidylate synthase [Meyerozyma guilliermondii ATCC 6260] Length = 302 Score = 331 bits (848), Expect = 9e-89, Method: Composition-based stats. Identities = 132/294 (44%), Positives = 177/294 (60%), Gaps = 31/294 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 YLDL H+I G R DRTG GT+S F Q+RFDLS FPLLTTKKV K+++HEL Sbjct: 9 QAYLDLCSHIITHGEHRPDRTGTGTKSVFAPPQLRFDLSNDSFPLLTTKKVFSKAIIHEL 68 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ GD++ ++L GV IW+ ++ G+LGP+YG QWR + Sbjct: 69 LWFVAGDTDANHLSEKGVKIWEGNGSREYLDKLGLTDRRVGDLGPVYGFQWRHFGAQYKT 128 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 +Y G DQ+ +++ L+ +PY RR I+SAWN +MALPPCH QFYV Sbjct: 129 CDDNYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAQMALPPCHVFCQFYVSFPDA 188 Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++ GEFIHT+GD H+YN+H + Sbjct: 189 GRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIHTMGDAHVYNDHID 248 Query: 215 QADLQLSRSPRTLPQMIINPN----IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R+PR P++ I I + F + DF + Y+P+ I K+SV Sbjct: 249 ALKEQLQRTPREFPKLYIKEERKHQITSIDDFTFSDFEIVDYDPYGPIKMKMSV 302 >gi|294441235|gb|ADE75019.1| dihydrofolate reductase-thymidylate synthase [Plasmodium knowlesi] Length = 626 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 121/282 (42%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L + V IW+ ++ +LGPIYG QWR + Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I ++ Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKISMDMA 625 >gi|312872324|ref|ZP_07732394.1| thymidylate synthase [Lactobacillus iners LEAF 2062A-h1] gi|311092147|gb|EFQ50521.1| thymidylate synthase [Lactobacillus iners LEAF 2062A-h1] Length = 318 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 145/313 (46%), Positives = 184/313 (58%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLL+ ++ G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V + + ELLW Sbjct: 6 QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L H IWDEW Sbjct: 66 FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQNDELFNIKYQEQMK 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + K G+LG +YG QWR W G+ IDQ+ +I++ ++ +P SRR IVS Sbjct: 126 IFTEKILSDVTFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNIIEQIKTNPDSRRLIVS 185 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN I +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL ++A Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHFEQ + QLSR+ P + +NP +L F +D L Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFEQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLID 305 Query: 252 YEPHAAILAKVSV 264 Y H I A V+V Sbjct: 306 YNHHGTIKAPVAV 318 >gi|314936430|ref|ZP_07843777.1| thymidylate synthase [Staphylococcus hominis subsp. hominis C80] gi|313655049|gb|EFS18794.1| thymidylate synthase [Staphylococcus hominis subsp. hominis C80] Length = 318 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K + ELLWF+ Sbjct: 9 YHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKVSFKLIATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIKYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQKDENFNKMYQQEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D GN DQ+ +++Q ++ +P SRRHIVSAW Sbjct: 129 KEKVLNDDTFAKKYGDLGHVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH E QLSR P + IN + YED L Y+ Sbjct: 249 LEVGEFIHTFGDAHIYSNHIEAIKTQLSRESFAPPTLKINSE-QSIFDINYEDLELVDYQ 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|99030333|gb|ABF61432.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax] Length = 618 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 120/282 (42%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY ++F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMVKFNLSEYFPLLTTKKLFLRGIIEELLW 395 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG+++ + L V IW+ ++ +LGPIYG QWR + Sbjct: 396 FIRGETDGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I +++ Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617 >gi|294441233|gb|ADE75018.1| dihydrofolate reductase-thymidylate synthase [Plasmodium knowlesi] Length = 626 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 121/282 (42%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L + V IW+ ++ +LGPIYG QWR + Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +++ ++ +P SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP + ++ F DFT+ +Y H I ++ Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKISMDMA 625 >gi|19481716|gb|AAL88992.1| WSSV124 [shrimp white spot syndrome virus] Length = 289 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 133/285 (46%), Positives = 181/285 (63%), Gaps = 22/285 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL+L+R +++ G + DRTG GT S FG QMRF L P+LTTKK+ W+ VV EL Sbjct: 5 HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELS 64 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+RG+++ L + + IW+ ++ G+LGP+YG QWR + Sbjct: 65 WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGFQWRHFGAEYDTC 124 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G IDQ+++I+++LR +P RR I++AWN + MALPPCH QFYV NG+LS Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGDV LG+PFNIASYSLLT ++AS++G + GEFI TLGD H+YN H E QL Sbjct: 185 CQLYQRSGDVGLGVPFNIASYSLLTHLMASMVGLKPGEFILTLGDAHIYNTHIEVLKKQL 244 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA-ILAKVSV 264 R PR P++ I + F + F L Y+PH+ + K++V Sbjct: 245 CRVPRPFPKLRILMAPEKIEDFTIDMFYLEGYQPHSGNLQMKMAV 289 >gi|152002501|dbj|BAF73525.1| thymidylate synthase [Onion yellows phytoplasma OY-W] Length = 288 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 147/293 (50%), Positives = 198/293 (67%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+ YLDL R +++ GS R DRT GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL Sbjct: 1 MNTYLDLCRFILQKGSFRNDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD-----------------------------KDGELG 91 WFL+GD+N+ YL ++ V+IW+EW K G LG Sbjct: 61 WFLKGDTNICYLVQNNVNIWNEWPYQKYQQSAFFQNETLKEFVEKIKNDPLFAIKHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + N +DQI ++ ++ +P SRR I+++WN L+++MALPPCH L Q Sbjct: 121 PVYGKQWRDF-----NGVDQIKFLISEIKTNPNSRRLILNSWNPPLLNQMALPPCHVLIQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V Q EFIHTLGD H+Y+N Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H Q Q+ R+P+ LPQMI+NP+I ++ F++ DFTL++Y+ + ++V Sbjct: 236 HLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFSDFTLQNYQCDGILKGDIAV 288 >gi|39938779|ref|NP_950545.1| thymidylate synthase [Onion yellows phytoplasma OY-M] gi|62901327|sp|Q6YQT0|TYSY_ONYPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|39721888|dbj|BAD04378.1| thymidylate synthase [Onion yellows phytoplasma OY-M] Length = 288 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 147/293 (50%), Positives = 198/293 (67%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+ YLDL R +++ GS R DRT GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL Sbjct: 1 MNTYLDLCRFILQKGSFRNDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD-----------------------------KDGELG 91 WFL+GD+N+ YL ++ V+IW+EW K G LG Sbjct: 61 WFLKGDTNICYLVQNNVNIWNEWPYQKYQQSAFFQNETLKEFLEKIKNDPLFAIKHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + N +DQI ++ ++ +P SRR I+++WN L+++MALPPCH L Q Sbjct: 121 PVYGKQWRDF-----NGVDQIKFLISEIKTNPNSRRLILNSWNPPLLNQMALPPCHVLIQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V Q EFIHTLGD H+Y+N Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H Q Q+ R+P+ LPQMI+NP+I ++ F++ DFTL++Y+ + ++V Sbjct: 236 HLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFSDFTLQNYQCDGILKGDIAV 288 >gi|229822730|ref|ZP_04448800.1| hypothetical protein GCWU000282_00018 [Catonella morbi ATCC 51271] gi|229787543|gb|EEP23657.1| hypothetical protein GCWU000282_00018 [Catonella morbi ATCC 51271] Length = 313 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 146/314 (46%), Positives = 185/314 (58%), Gaps = 51/314 (16%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY +L+R ++ G + DRTGVGT+S FGYQMRFDLS GFP++TTK+V + + ELL Sbjct: 1 MQQYQELVRKILAEGHVKTDRTGVGTKSLFGYQMRFDLSHGFPMVTTKRVPFGLIKSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFLRGD+NV YL H IWDEWA Sbjct: 61 WFLRGDTNVRYLLEHNNHIWDEWAFKRYVESPDYHGPDMTDFGLRAVADPDFNEIYQQEL 120 Query: 85 --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 ++ G LG +YG QWRSWP +G +DQIS ++ ++ P SRR IV Sbjct: 121 AAFNERVLTDDDFAERYGNLGNVYGAQWRSWPLRNGETLDQISQLIDMIKHSPDSRRLIV 180 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 SAWN + MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A Sbjct: 181 SAWNPEDVPSMALPPCHTLFQFYVYDGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAK 240 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 + G+F+HTLGD HLY NH E A+ LSR P+ LPQ+ I+ + + L+ Sbjct: 241 ECDLEVGDFVHTLGDAHLYLNHLEAAETLLSREPKPLPQLEID-DFEQFDQVSTDQIRLQ 299 Query: 251 SYEPHAAILAKVSV 264 YEP I A ++V Sbjct: 300 GYEPWPTIKAPIAV 313 >gi|167957301|ref|ZP_02544375.1| Thymidylate synthase [candidate division TM7 single-cell isolate TM7c] Length = 312 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 144/312 (46%), Positives = 185/312 (59%), Gaps = 48/312 (15%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD+LR+V G + +RTG GT FG Q R++L GFP +TTKK+++ SV HELL Sbjct: 1 MRQYLDILRYVRNNGIQKSNRTGTGTTEIFGAQTRYNLEDGFPAVTTKKLYFNSVAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84 WFL+G N+ YL ++GV IWDEW Sbjct: 61 WFLKGTGNIEYLAQNGVHIWDEWPYKNYLEKTGQRIPEINGDEWCAGMKQFIGRIATDHA 120 Query: 85 --DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK-- 140 ++ G+LGP+YGVQWR WPD G IDQI + + ++ +P SRR+IVSAWNVA ID Sbjct: 121 FAEEWGDLGPVYGVQWRKWPDGKGGTIDQIQNAIDMIKNNPMSRRNIVSAWNVAEIDDIA 180 Query: 141 --MALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 LPPCH +FQF V G KL L QRS D+FLG+PFNIASY+LL M+A V Sbjct: 181 RAGGLPPCHTIFQFNVRPGENGEKDKLDLTLTQRSADIFLGVPFNIASYALLLSMIAQVT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G Q GEF+HTL H+YNNH Q D QLSR P LP++ +NP+I ++ F +D L Y Sbjct: 241 GKQPGEFVHTLNSAHIYNNHRVQVDEQLSRHPLPLPKLWLNPDIKNIDDFTIKDIRLEGY 300 Query: 253 EPHAAILAKVSV 264 E H+ I A ++V Sbjct: 301 ESHSPIKAPIAV 312 >gi|161723289|ref|NP_110008.2| thymidylate synthase [Mycoplasma pneumoniae M129] gi|2501428|sp|P78029|TYSY_MYCPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|301633474|gb|ADK87028.1| thymidylate synthase [Mycoplasma pneumoniae FH] Length = 287 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 137/293 (46%), Positives = 189/293 (64%), Gaps = 35/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL R+V++ G R +RT FGYQM FD+SK FPLLTTKKVHWKS+VHELL Sbjct: 1 MQQYLDLARYVLEHGKYRPNRTDTAGIGVFGYQMHFDISKHFPLLTTKKVHWKSIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91 WF++GD+N+ YL + V+IW+EW + G LG Sbjct: 61 WFIKGDTNIKYLVDNKVNIWNEWPYESFKKSPHFNGESQKEFIERIRQDAKFAQQFGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + N +DQ+ ++ ++ +P+SRR IVS+WN +D+M LPPCH L+Q Sbjct: 121 PVYGKQWRDF-----NGVDQLKKVIAQIKVNPFSRRLIVSSWNPNEVDQMLLPPCHSLYQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV +G+LSCQLYQRSGD+FLGIPFNIASYSLL ++A + G F+HT+GD H+Y N Sbjct: 176 FYVQDGQLSCQLYQRSGDIFLGIPFNIASYSLLVYLVAKETNLKPGSFVHTIGDAHIYEN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ LQL+R P+ LP++++ + + ++++D L Y+ H I +V+V Sbjct: 236 HLEQIKLQLTRQPKPLPKVVLKSD-KSIFDYQFDDIELVDYDHHPTIKGEVAV 287 >gi|169351012|ref|ZP_02867950.1| hypothetical protein CLOSPI_01789 [Clostridium spiroforme DSM 1552] gi|169292074|gb|EDS74207.1| hypothetical protein CLOSPI_01789 [Clostridium spiroforme DSM 1552] Length = 295 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 131/298 (43%), Positives = 186/298 (62%), Gaps = 37/298 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL++ ++V++ G DR DRTG GTRS FGYQ R+DL GFPL+TTKK+ + + ELL Sbjct: 1 MKQYLEMCKYVLENGEDRSDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFIRPIAEELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD--------------------------------G 88 WF++GD+N+ YL V IW+EW ++ G Sbjct: 61 WFIKGDTNIKYLVDRNVKIWNEWPYENYKKSKDYQGETIEEFIEKIKNLPEDDSFVLKYG 120 Query: 89 ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 +LGP+YG QWR++ + +DQ++ +V SL+ DP+SRRHI+ AWN A +D M LPPCH Sbjct: 121 DLGPVYGAQWRNF---NYEGVDQLAKLVDSLKNDPFSRRHIICAWNPAQVDNMTLPPCHA 177 Query: 149 LFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206 QFYV K LSCQLYQRS D+FLG+PFNIASY+L+ MLA G++ EF+HT+GD Sbjct: 178 FLQFYVSADKKYLSCQLYQRSADIFLGVPFNIASYALMVEMLARTCGYEAKEFVHTIGDA 237 Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H+Y +HF+ QL R P ++++NP + + ++ ED + Y+ + ++ KVSV Sbjct: 238 HIYKDHFDVVKQQLERKPLPKCKLVLNPEVKSIFDYKIEDIKIEDYQSYGKLVGKVSV 295 >gi|294441237|gb|ADE75020.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 639 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I ++ F DFT+ +Y H I ++ Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKIAMDMA 638 >gi|166164543|gb|ABY83770.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] gi|166164545|gb|ABY83771.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 639 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I ++ F DFT+ +Y H I ++ Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKITMDMA 638 >gi|166164549|gb|ABY83773.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 641 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 359 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 418 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 419 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 478 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 479 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 538 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 539 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 598 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I ++ F DFT+ +Y H I ++ Sbjct: 599 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKIAMDMA 640 >gi|242373739|ref|ZP_04819313.1| thymidylate synthase [Staphylococcus epidermidis M23864:W1] gi|242348559|gb|EES40161.1| thymidylate synthase [Staphylococcus epidermidis M23864:W1] Length = 318 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 139/311 (44%), Positives = 184/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L V++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K + ELLWF+ Sbjct: 9 YHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87 +GD+N+ YL ++ +IW+EWA ++ Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYIQSNDYQGPDMTDFGHRSQQDPEFNELYKEEMKKF 128 Query: 88 --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 G+LG +YG QWR W D DG DQ+ +++ ++ +P SRRHIVSAW Sbjct: 129 KQRILNDDDFARQYGDLGNVYGKQWRDWEDKDGRHFDQLKTVIDQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECH 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + + QL+R P + IN + + YED + YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAIETQLARESYQAPTLKINTD-KSIFDINYEDLEVVDYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|50365237|ref|YP_053662.1| thymidylate synthase [Mesoplasma florum L1] gi|62901302|sp|Q6F145|TYSY_MESFL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|50363793|gb|AAT75778.1| thymidylate synthase [Mesoplasma florum L1] Length = 288 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 132/294 (44%), Positives = 178/294 (60%), Gaps = 36/294 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ ++K G R DRT GT S FG Q R+DL +GFPLLTTKKV +K++ HE+L Sbjct: 1 MKQYLELVNEILKDGEKREDRTNTGTISKFGVQKRYDLREGFPLLTTKKVFYKAIFHEML 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91 WF++GD+N+ YL + V IW+EW +K G+LG Sbjct: 61 WFIKGDTNIKYLVENNVKIWNEWPYENFKKSSEFNNETLQEFVERLKNDNEFCNKWGDLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + IDQ + ++ ++ +P+SRRHIVSAWN A +D M LPPCH +Q Sbjct: 121 PVYGKQWRDF-----GGIDQFAKLINDIKKNPFSRRHIVSAWNPAEVDNMLLPPCHSFWQ 175 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 YV +G L QLYQRSGDVFLG+PFNIASY+LL ++A + F+HT+GD H+Y Sbjct: 176 VYVSKDGWLDLQLYQRSGDVFLGVPFNIASYALLMELIAKECNLKARYFVHTIGDAHIYL 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH EQ + QL R P L ++ IN + +ED + YE HA I +V+V Sbjct: 236 NHLEQINEQLKRKPLPLCKIKINSE-KSIFDIAFEDIEIEGYESHAKITGEVAV 288 >gi|166164547|gb|ABY83772.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] gi|294441239|gb|ADE75021.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 639 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I ++ F DFT+ +Y H I ++ Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKITMDMA 638 >gi|228476137|ref|ZP_04060845.1| thymidylate synthase [Staphylococcus hominis SK119] gi|228269960|gb|EEK11440.1| thymidylate synthase [Staphylococcus hominis SK119] Length = 318 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 141/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K + ELLWF+ Sbjct: 9 YHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKVSFKLIATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIKYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQKDENFNKMYQQEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D GN DQ+ +++Q ++ +P SRRHIVSAW Sbjct: 129 KEKVLNDDTFAKKYGDLGHVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH E QLSR P + I+ + YED L Y+ Sbjct: 249 LEVGEFIHTFGDAHIYSNHIEAIKTQLSRESFAPPTLKISSE-QSIFDINYEDLELVDYQ 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|19115217|ref|NP_594305.1| thymidylate synthase (predicted) [Schizosaccharomyces pombe 972h-] gi|74665572|sp|Q9UTI7|TYSY_SCHPO RecName: Full=Probable thymidylate synthase; Short=TS; Short=TSase gi|5725409|emb|CAB52423.1| thymidylate synthase (predicted) [Schizosaccharomyces pombe] Length = 625 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 126/295 (42%), Positives = 176/295 (59%), Gaps = 32/295 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKGF-PLLTTKKVHWKSVVHEL 59 QYL+L+R++++ G R DRTG GTRS F Q+RF L PLLTTK+V + V+ EL Sbjct: 331 EQYLNLIRYILENGQSRPDRTGTGTRSVFAPPQLRFSLRNNTLPLLTTKRVFLRGVLEEL 390 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ GD+N ++L G+ IWD ++ G+LGPIYG QWR + Sbjct: 391 LWFIHGDTNANHLSEKGIHIWDGNGSREFLDSRGLTDRKVGDLGPIYGFQWRHFGAQYVD 450 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY +DQ++ ++ +L+ +PY RR I+SAWN I +MALPPCH QFYV Sbjct: 451 CDTDYTNKGVDQLAQVISTLKLNPYDRRIILSAWNPLAIPEMALPPCHIFCQFYVSEPCK 510 Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 +LS +YQRS D+ LG+PFNIASYSLLT M+A + G++ EF+H +GD H+YN+H Sbjct: 511 PGGKPQLSSMMYQRSADMGLGVPFNIASYSLLTHMIAHMCGYEAAEFVHVMGDCHIYNDH 570 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL R P+ P++ + D + SF +DF + Y P+ I K+SV Sbjct: 571 LEALQTQLERVPKAFPKLFFKRDAKDIGSIDSFSVDDFAVEGYNPYGPIKMKMSV 625 >gi|209878892|ref|XP_002140887.1| thymidylate synthase family protein [Cryptosporidium muris RN66] gi|209556493|gb|EEA06538.1| thymidylate synthase family protein [Cryptosporidium muris RN66] Length = 549 Score = 327 bits (840), Expect = 6e-88, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 182/283 (64%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLD+L +V++ G R +RTG+ T S FG MRFDL + FPLLTTK V + + EL+WF Sbjct: 267 QYLDMLSNVLQNGHYRENRTGINTYSIFGASMRFDLRESFPLLTTKNVALRIIFEELMWF 326 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++GD+N ++L V IW K+ +LGPIYG QWR + Sbjct: 327 IKGDTNGNHLLDKKVFIWAGNGSKEYLNKVGLGYREENDLGPIYGFQWRHFNAEYKTMHD 386 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-KLSC 161 +Y+G +DQ++++++SL+ +PY RRHI+SAWN + + MALPPCH L QFYVDN +LSC Sbjct: 387 NYNGQGVDQLANLIESLKKNPYDRRHILSAWNPSAVKYMALPPCHILSQFYVDNNNRLSC 446 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASYSLL +M+A + G++ GEFIH +GDVH+Y NH EQ Q+ Sbjct: 447 SLYQRSCDLGLGCPFNIASYSLLCVMIAHICGYEPGEFIHFIGDVHIYENHVEQLKQQIK 506 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR PQ+ + + + F +ED + Y PH I +++V Sbjct: 507 RLPRPFPQLRLKRKVDKVEDFIWEDIEIIGYYPHPTIRMEMAV 549 >gi|170017673|ref|YP_001728592.1| thymidylate synthase [Leuconostoc citreum KM20] gi|169804530|gb|ACA83148.1| Thymidylate synthase [Leuconostoc citreum KM20] Length = 319 Score = 327 bits (840), Expect = 6e-88, Method: Composition-based stats. Identities = 138/314 (43%), Positives = 178/314 (56%), Gaps = 51/314 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + ++ G + DRTG GT S FG QMRF+L +GFPLLTTKKV + + ELLW Sbjct: 6 QQYLDLAQKILDEGHLKGDRTGTGTHSLFGSQMRFNLQEGFPLLTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L +H IWDEW Sbjct: 66 FLRGDNNIRFLLQHNNHIWDEWAFKNWVSSEEYSGPDMTNFSHRAQEDADFAAAYQAQKA 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDG-NVIDQISSIVQSLRADPYSRRHIV 130 +K G +G +YG WR W G N IDQ++ +V ++A P SRR I+ Sbjct: 126 IFVDNILNDDDFMEKFGYIGDVYGKLWRGWETISGENAIDQVNRLVNQIKATPDSRRLIL 185 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 +AWN + LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL M+A+ Sbjct: 186 TAWNAETTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHMVAA 245 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G++ G+FIHT+GD H+YNNH EQ QLSR LP++ +NP + L + +D + Sbjct: 246 QTGYEVGDFIHTIGDTHIYNNHIEQITEQLSRPMHHLPKLWLNPEVKSLFDYTMDDIKVL 305 Query: 251 SYEPHAAILAKVSV 264 YE AI A V+V Sbjct: 306 DYESEPAIKAPVAV 319 >gi|315658331|ref|ZP_07911203.1| thymidylate synthase [Staphylococcus lugdunensis M23590] gi|315496660|gb|EFU84983.1| thymidylate synthase [Staphylococcus lugdunensis M23590] Length = 318 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 143/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL ++ G ++ DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHDLCEDILAIGKNKDDRTQTGTVSKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL +H +IW+EWA Sbjct: 69 KGDTNIRYLLQHNNNIWNEWAFEKYIKSSDYHGPDMTNFGHRSLVDDHFKAQYKEEMARF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D GN DQ+ ++++ ++ P SRRHI+SAW Sbjct: 129 KENILIDDAFAKKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIEQIKTHPNSRRHIISAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N A +D MALPPCH +FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPAEVDTMALPPCHTMFQFYVQNGKLSCQLYQRSADIFLGVPFNIASYALLTHLVAKECD 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSRS P + IN + + YED L +Y+ Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAVHTQLSRSSFEPPTIRINTD-KSIFDISYEDIELINYQ 307 Query: 254 PHAAILAKVSV 264 HAAI A ++V Sbjct: 308 SHAAIKAPIAV 318 >gi|70726480|ref|YP_253394.1| thymidylate synthase [Staphylococcus haemolyticus JCSC1435] gi|123776140|sp|Q4L6D7|TYSY_STAHJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|68447204|dbj|BAE04788.1| thymidylate synthase [Staphylococcus haemolyticus JCSC1435] Length = 318 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 140/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G+ R DRT GT S FG+Q+RFDLSKGFPLLTTKKV +K + ELLWF+ Sbjct: 9 YHALCEEILEIGNQRDDRTHTGTFSKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFEKYVQSNDYHGPDMTNFGHRALQDDEFNELYKEEMSKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D +GN DQ+ ++++ ++ P SRRHIVSAW Sbjct: 129 KQHILNDDSFAKKYGDLGNVYGKQWRDWVDKEGNHFDQLKTVIEQIKNSPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEF+HT GD H+Y+NH E QLSR+ P + IN N + YED L Y Sbjct: 249 LEVGEFVHTFGDAHIYSNHIEAIKTQLSRNSFDPPTLKINSN-ASIFDINYEDLELIGYN 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|289550834|ref|YP_003471738.1| Thymidylate synthase [Staphylococcus lugdunensis HKU09-01] gi|289180366|gb|ADC87611.1| Thymidylate synthase [Staphylococcus lugdunensis HKU09-01] Length = 318 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 144/311 (46%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y DL ++ G ++ DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHDLCEDILAIGKNKDDRTQTGTVSKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL +H +IW+EWA Sbjct: 69 KGDTNIRYLLQHNNNIWNEWAFEKYIKSSDYHGPDMTNFGHRSLVDDHFKAQYKEEMTRF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G+LG +YG QWR W D GN DQ+ ++++ ++ P SRRHIVSAW Sbjct: 129 KENILTDDAFARKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIEQIKTHPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N A +D MALPPCH +FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 189 NPAEVDTMALPPCHTMFQFYVQNGKLSCQLYQRSADIFLGVPFNIASYALLTHLVAKECD 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSRS P + IN + + YED L +Y+ Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAVHTQLSRSSFEPPTIRINTD-KSIFDISYEDIELINYQ 307 Query: 254 PHAAILAKVSV 264 HAAI A ++V Sbjct: 308 SHAAIKAPIAV 318 >gi|145567018|gb|ABP81859.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] Length = 621 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I + F DFT+++Y H I ++ Sbjct: 579 RIPYPFPTLKLNPEIKSIEDFTISDFTIQNYVHHDKITMDMA 620 >gi|145567020|gb|ABP81860.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] Length = 621 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 459 ANYENKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I ++ F DFT+++Y H I ++ Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKITMDMA 620 >gi|50548459|ref|XP_501699.1| YALI0C10901p [Yarrowia lipolytica] gi|49647566|emb|CAG82008.1| YALI0C10901p [Yarrowia lipolytica] Length = 296 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 131/288 (45%), Positives = 175/288 (60%), Gaps = 27/288 (9%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61 YLDL VI+ G R DRTG GT S F Q+RFDLS PLLTTK+V ++ V+ ELLW Sbjct: 9 YLDLCARVIEEGESRDDRTGTGTLSLFAPPQLRFDLSNDILPLLTTKRVFYRGVLEELLW 68 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G ++ L + IWD K+ G+LGP+YG QWR + Sbjct: 69 FVAGCTDGKKLSEKNIHIWDGNGSKEFLEKAGLGHRREGDLGPVYGFQWRHFGAEYKNCD 128 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-----DN 156 DY G +DQ+ ++ +LR +P+ RR I+SAWN A + KMALPPCH QFYV + Sbjct: 129 TDYTGQGVDQLKQVIHTLRTNPHDRRIILSAWNPADLPKMALPPCHMFCQFYVSYKNSER 188 Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 G+LSCQLYQRS D+ LG+PFNIASY+LLT M+A V GE IHT+GD H+Y +H + Sbjct: 189 GRLSCQLYQRSCDLGLGVPFNIASYALLTRMIAQVTDLDCGELIHTMGDAHVYKDHVDAL 248 Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q++R+P P++ +I D+ F YEDF L Y+P + I ++SV Sbjct: 249 KQQIARTPGQFPKLTFARDIKDIDGFNYEDFVLEGYKPQSKIEMQMSV 296 >gi|209965294|ref|YP_002298209.1| thymidylate synthase [Rhodospirillum centenum SW] gi|209958760|gb|ACI99396.1| thymidylate synthase [Rhodospirillum centenum SW] Length = 302 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 128/278 (46%), Positives = 175/278 (62%), Gaps = 28/278 (10%) Query: 15 GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74 G+ R DRTGVGT + FG QMRFDLS+GFPLLTTK++ +K+ +HELLWFL GD+ + L + Sbjct: 25 GARREDRTGVGTLALFGRQMRFDLSRGFPLLTTKRIFYKAAIHELLWFLSGDTRLRPLLQ 84 Query: 75 HGVSIW----------------------------DEWADKDGELGPIYGVQWRSWPDYDG 106 +GV IW D +A + G+LGP+YG QWR+W DG Sbjct: 85 NGVRIWTDWPLARYRRETGESIDQETFERRVLEDDAFAARWGDLGPVYGKQWRAWETADG 144 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 V+DQI+ +V +R +P SRR + + WNV +++MALPPCH +Q++V +G+LS LYQR Sbjct: 145 RVVDQIAQLVDGIRGNPTSRRLLFTGWNVGELERMALPPCHMTYQYFVADGRLSGILYQR 204 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S D LG+P+N+ +LL MLA + GE + T DVHLY NH EQA QL R PR Sbjct: 205 SADTLLGLPWNLCEAALLIHMLAQQCDLEPGELVWTGADVHLYLNHVEQARQQLGREPRP 264 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP+++I L +R+EDF + Y+PH I A+V+V Sbjct: 265 LPRLVIRRRPESLFGYRFEDFAIEGYDPHPHIRAEVAV 302 >gi|145567022|gb|ABP81861.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] Length = 621 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 123/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+Y+NH + +QL+ Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYSNHIDSLKVQLN 578 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I ++ F DFT+++Y H I ++ Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKITMDMA 620 >gi|166164553|gb|ABY83775.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 637 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 126/282 (44%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 355 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 414 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 415 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 474 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 475 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 534 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 535 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 594 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I ++ F DFT+ +Y H I ++ Sbjct: 595 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKITMDMA 636 >gi|319400786|gb|EFV89005.1| thymidylate synthase [Staphylococcus epidermidis FRI909] Length = 318 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYVQSADYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G LG +YG QWR W D +GN DQ+ S++Q ++ +P SRRHIVSAW Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKNNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRESYLPPQLKINTD-KSIFDINYEDLELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|145567024|gb|ABP81862.1| dihydrofolate reductase-thymidylate synthase [Plasmodium brasilianum] Length = 621 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I ++ F DFT+++Y H I ++ Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKISMDMA 620 >gi|300172851|ref|YP_003772016.1| thymidylate synthase [Leuconostoc gasicomitatum LMG 18811] gi|299887229|emb|CBL91197.1| Thymidylate synthase [Leuconostoc gasicomitatum LMG 18811] Length = 322 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 139/317 (43%), Positives = 183/317 (57%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + V+ G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV++ + ELLW Sbjct: 6 QQYLDLAKKVLDEGTQKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVYFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L +H IWDEWA K+ Sbjct: 66 FLRGDNNIRFLLQHNNHIWDEWAFKNWIESDQYTGPDMTNFGHRAQKDTAFALAYKEQKD 125 Query: 88 ----------------GELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127 G +G +YG WR+W D + IDQ+S +V+ ++ +P SRR Sbjct: 126 IFVDKILNDDEFMETFGYVGDVYGKLWRNWETSSLTADTDTIDQVSRLVEQIKTNPDSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNAEKTPQAPLPSCHVLSQFYVADGKLSVQLYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ G+F+HT+GD H+YNNH EQ QLSR LP++ +NP + L + +D Sbjct: 246 VAAQTGYEVGDFVHTIGDTHIYNNHTEQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + YE AI A V+V Sbjct: 306 KVLDYESEPAIKAPVAV 322 >gi|62240520|gb|AAX77434.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] gi|62240522|gb|AAX77435.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] gi|145700343|gb|ABP94173.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] gi|145700345|gb|ABP94174.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] gi|145700347|gb|ABP94175.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae] Length = 621 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL ++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I ++ F DFT+++Y H I ++ Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKITMDMA 620 >gi|170586742|ref|XP_001898138.1| thymidylate synthase [Brugia malayi] gi|158594533|gb|EDP33117.1| thymidylate synthase, putative [Brugia malayi] Length = 306 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 135/283 (47%), Positives = 172/283 (60%), Gaps = 21/283 (7%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61 +YLD +R+++K G DRTGVGT S FG + L G P+LTTK+V+WK VV ELLW Sbjct: 24 KYLDQVRYILKNGERIDDRTGVGTISVFGMHSVYSLRNGVVPVLTTKRVYWKGVVEELLW 83 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102 F+RGD+N +L GV IWD + +G+LGPIYG QWR Sbjct: 84 FIRGDTNAKHLSEKGVRIWDANGSRQFLDQCGFSDRSEGDLGPIYGFQWRHCGAEYRGMD 143 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY IDQ+S I+ ++ +P+SRR I+SAWNV + MALPPCH L QF V NG+LSC Sbjct: 144 TDYTNQGIDQLSEIIDLIKNEPHSRRIILSAWNVKDLKLMALPPCHTLAQFAVRNGELSC 203 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFN+ASY LLT M+A V G + G H LGD H+Y NH + QL Sbjct: 204 QLYQRSGDMGLGVPFNLASYGLLTHMIAHVCGLKTGHLCHVLGDAHVYMNHVDALQEQLK 263 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P + NI + F YE L +Y+P AI ++V Sbjct: 264 RQPRQFPTVRFIGNIKTIDDFTYESIVLENYQPMPAIKMAMAV 306 >gi|326692446|ref|ZP_08229451.1| thymidylate synthase [Leuconostoc argentinum KCTC 3773] Length = 322 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 132/317 (41%), Positives = 178/317 (56%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + ++ G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV + + ELLW Sbjct: 6 QQYLDLAQKILAEGNLKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L +H IWDEW Sbjct: 66 FLRGDNNIRFLLQHNNHIWDEWAFKNWVESNDYTGPDMTNFGHRAETDSEFAAVYQAQKA 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127 +K G +G +YG WR W +DQ++ +V+ ++ P SRR Sbjct: 126 IFVDKILNDDAFMEKFGYVGDVYGKLWRGWETSSVTAGTETVDQVARLVEEIKTTPDSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNADTTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ G+F+HT+GD H+YNNH +Q QLSR LP++ +NP++ + + +D Sbjct: 246 MAAQTGYEVGDFVHTIGDTHIYNNHVDQITEQLSRPMHPLPKLWLNPDVKSIFDYTMDDI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + YE A I A V+V Sbjct: 306 KVLDYESEAPIKAPVAV 322 >gi|325120559|emb|CBZ56113.1| Bifunctional dihydrofolate reductase-thymidylate synthase, related [Neospora caninum Liverpool] Length = 690 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 135/334 (40%), Positives = 178/334 (53%), Gaps = 72/334 (21%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL+ +I G+ DRTGVG S FG MRF L K FPLLTTK+V WK V+ ELLWF Sbjct: 357 QYLDLIADIINNGATMDDRTGVGVISKFGCTMRFSLDKAFPLLTTKRVFWKGVLEELLWF 416 Query: 63 LRGDSNVSYLHRHGVS-------------------------------------------- 78 +RGD+N ++L GV Sbjct: 417 IRGDTNANHLSEKGVKASLQAPLLSFRLLRRLGAFLRGVTPPRLHAYIECTRLSSRPSAA 476 Query: 79 -----IWDEWADKD------------GELGPIYGVQWRSWP--------DYDGNVIDQIS 113 IWD+ ++ G++GP YG QWR + DY G +DQ+ Sbjct: 477 FAGPRIWDKNVTREFLDSRNLSHREVGDIGPGYGFQWRHFGATYKDMHTDYTGQGVDQLK 536 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSCQLYQRSGDVFL 172 ++ LR +P RR +++AWN A +D+MALPPCH L QFYV+N + LSC +YQRS DV L Sbjct: 537 KVINMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVENDRDLSCVMYQRSCDVGL 596 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G+PFNIASYSLLT+M+A V + EFIH +G+ H+Y+NH E QL R PR P + I Sbjct: 597 GVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYSNHVEALKEQLRREPRPFPIVNI 656 Query: 233 --NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I ++ F EDF + Y PH I +++V Sbjct: 657 LNKERIQEIDDFTAEDFEVVGYVPHGRIQMEMAV 690 >gi|295692816|ref|YP_003601426.1| thymidylate synthase [Lactobacillus crispatus ST1] gi|295030922|emb|CBL50401.1| Thymidylate synthase [Lactobacillus crispatus ST1] Length = 303 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 137/303 (45%), Positives = 175/303 (57%), Gaps = 50/303 (16%) Query: 12 IKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSY 71 + G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV + + ELLWFLRGD+N+ + Sbjct: 1 MTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLWFLRGDTNIRF 60 Query: 72 LHRHGVSIWDEWADKD-------------------------------------------- 87 L H IWDEWA K+ Sbjct: 61 LLEHNNHIWDEWAFKNWIESAEYQGPDMTNFGLRSQSDPEFNQVYQAEMRKFNQRILDDP 120 Query: 88 ------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 G LG +YG QWR W G IDQI+ +++ ++ P SRR IV+AWN + Sbjct: 121 AFAQKYGNLGDVYGAQWRHWEKRTGGFIDQIADVIKQIKETPDSRRMIVTAWNPEDVPTS 180 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL M+A G + GEF+H Sbjct: 181 ALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARETGLKVGEFVH 240 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 TLGD H+Y NHF Q LSR+P P++ +NP + F +D + +Y+ H I A Sbjct: 241 TLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLNYQHHGTIKAP 300 Query: 262 VSV 264 V+V Sbjct: 301 VAV 303 >gi|222086396|ref|YP_002544930.1| thymidylate synthase protein [Agrobacterium radiobacter K84] gi|254790227|sp|B9JH03|TYSY_AGRRK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|221723844|gb|ACM27000.1| thymidylate synthase protein [Agrobacterium radiobacter K84] Length = 307 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 132/301 (43%), Positives = 174/301 (57%), Gaps = 38/301 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLDL+ H+++ G R DRTGVGT S G MRFDLSKG P+ TTK+V+WK V E+L Sbjct: 7 YQYLDLMAHLLENGDRRIDRTGVGTLSGLGAMMRFDLSKGQLPVFTTKRVYWKLAVKEML 66 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL GD+N+ L + V IW +W + G+LGP Sbjct: 67 WFLTGDTNIRNLLKQNVRIWTDWPLAAYRKATGEAISQEDFEARILADEAFAETWGDLGP 126 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W D DG V DQI++++ LR +P SRR I AWNV + MALPPCH ++QF Sbjct: 127 VYGKQWRQWRDADGQVHDQIATVIDQLRHNPSSRRMIFHAWNVGELAGMALPPCHMVYQF 186 Query: 153 YVDN---------GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 +V N +LS +YQRS D+FLG PFNI ++L M+A + GE + Sbjct: 187 HVSNLPSPGETKRPRLSLMVYQRSCDLFLGNPFNICQQAVLLAMVAQQVDMDVGELVWAG 246 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 GDVH+Y NH + QLSR PR P + + + +R EDF + YEPHAAI A+V+ Sbjct: 247 GDVHIYLNHLDAIREQLSREPRPFPTLRLLRRPDSIDDYRIEDFEVSDYEPHAAIAAEVA 306 Query: 264 V 264 V Sbjct: 307 V 307 >gi|242242714|ref|ZP_04797159.1| thymidylate synthase [Staphylococcus epidermidis W23144] gi|242233850|gb|EES36162.1| thymidylate synthase [Staphylococcus epidermidis W23144] Length = 318 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYVQSNDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G LG +YG QWR W D +GN DQ+ S++Q ++ +P SRRHIVSAW Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKNNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRESYLPPQLKINTD-KSIFDINYEDLELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|22788864|ref|NP_690528.1| thymidylate synthase [Heliothis zea virus 1] gi|20452159|gb|AAM22072.1|AF264019_1 thymidylate synthase [Heliothis zea virus 1] Length = 291 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 126/284 (44%), Positives = 176/284 (61%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL+ +R +I+ G+ R DRT VGT S FG R+ L PLLTTK V K V+ ELL Sbjct: 8 HQYLNTIRSIIETGNRRMDRTKVGTLSHFGVMHRYSLRDNSLPLLTTKTVFVKGVIEELL 67 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRS-------- 100 W + G +N L R GV IW + + +G+LGP+YG QWR Sbjct: 68 WMISGSTNAKELSRKGVHIWSGNSSRSVLDSLGFTDRQEGDLGPVYGFQWRHSGTKYVDC 127 Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ+ +I+ +L+ +P RR ++ +WN A + +MALPPCHCL QFY +GKLS Sbjct: 128 ETDYSGQGVDQLQTIIDTLKTNPTDRRIVMCSWNPADLHQMALPPCHCLAQFYSYDGKLS 187 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C +YQRS D+ LG+PFNIASYS+LT M+A + G + EF+HT+GD H+Y NH E +QL Sbjct: 188 CLMYQRSADMGLGVPFNIASYSMLTHMIAHITGLKAHEFVHTIGDAHVYLNHIEPLKVQL 247 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ + ++ SF+YEDF ++ Y+P+ I ++V Sbjct: 248 EREPRPFPKLEFARKVENIDSFKYEDFIIKGYDPYPKIPMVLAV 291 >gi|15829009|ref|NP_326369.1| thymidylate synthase [Mycoplasma pulmonis UAB CTIP] gi|25091481|sp|Q98Q31|TYSY_MYCPU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|14089953|emb|CAC13711.1| THYMIDYLATE SYNTHASE (TS) (TSASE) [Mycoplasma pulmonis] Length = 286 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 136/293 (46%), Positives = 184/293 (62%), Gaps = 36/293 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L+ V++ G + +RT V T S FGYQMRFDLSKGFPL+TTKK ++ ++ HELL Sbjct: 1 MKQYLDFLKWVLEKGKHKENRTSVDTISAFGYQMRFDLSKGFPLVTTKKTNFSAIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91 WF++GD+N+ YL + V+IW++W K G LG Sbjct: 61 WFIKGDTNIKYLVDNKVNIWNQWPYESYKKSQDFQSESLKEFIQKIKDDNEFAQKHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + IDQ+ +++ ++ +P SRR IVS+WN + ID M LPPCH LFQ Sbjct: 121 PVYGKQWRDFL-----GIDQLKKVIEQIKNNPNSRRLIVSSWNPSEIDTMLLPPCHTLFQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV++ KLSC LYQRS D FLGIPFNIASY+LLT +LA + G+F+H++GD H+Y N Sbjct: 176 FYVNDNKLSCHLYQRSADAFLGIPFNIASYALLTFLLAQETNLEVGDFVHSIGDAHIYVN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ QL R+P+ LP++II ++ +ED L YE I +V+V Sbjct: 236 HLEQVKTQLKRNPKELPKLIIKN--KNIFEINFEDIELVDYEFDPIIKGEVAV 286 >gi|324519207|gb|ADY47314.1| Thymidylate synthase [Ascaris suum] Length = 312 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 128/284 (45%), Positives = 168/284 (59%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +YL ++H+I G DRTGVGT S FG + L G PLLTTK+V+WK VV ELL Sbjct: 29 RKYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEELL 88 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF++GD++ L GV IWD ++ G+LGPIYG QWR + Sbjct: 89 WFIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYHGT 148 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ++ +++ ++ +P SRR I++AWNV + +MALPPCH L QF V NG+LS Sbjct: 149 DADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVRNGELS 208 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGD+ LG+PFN+ASY LLT M+A V + G H LGD H+Y NH + QL Sbjct: 209 CQLYQRSGDMGLGVPFNLASYGLLTHMIAHVCALKTGFLHHVLGDAHVYLNHIDALKEQL 268 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 SR PR P + I + F E L Y P A I ++V Sbjct: 269 SRDPRPFPTVHFEGRIDSIDDFTAESIILNGYNPMAPIKMPMAV 312 >gi|136615|sp|P13100|TYSY_PNECA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|7767148|pdb|1CI7|A Chain A, Ternary Complex Of Thymidylate Synthase From Pneumocystis Carinii gi|7767149|pdb|1CI7|B Chain B, Ternary Complex Of Thymidylate Synthase From Pneumocystis Carinii gi|14488434|pdb|1F28|A Chain A, Crystal Structure Of Thymidylate Synthase From Pneumocystis Carinii Bound To Dump And Bw1843u89 gi|14488435|pdb|1F28|B Chain B, Crystal Structure Of Thymidylate Synthase From Pneumocystis Carinii Bound To Dump And Bw1843u89 gi|14488436|pdb|1F28|C Chain C, Crystal Structure Of Thymidylate Synthase From Pneumocystis Carinii Bound To Dump And Bw1843u89 gi|14488437|pdb|1F28|D Chain D, Crystal Structure Of Thymidylate Synthase From Pneumocystis Carinii Bound To Dump And Bw1843u89 gi|169430|gb|AAA33802.1| thymidylate synthase [Pneumocystis carinii] Length = 297 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 130/291 (44%), Positives = 180/291 (61%), Gaps = 28/291 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYL+L++++I G DR DRTG GT S F ++F L FPLLTTK+V + V+ EL Sbjct: 7 QQYLNLVQYIINHGEDRPDRTGTGTLSVFAPSPLKFSLRNKTFPLLTTKRVFIRGVIEEL 66 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+RG+++ L + IWD ++ G+LGPIYG QWR + Sbjct: 67 LWFIRGETDSLKLREKNIHIWDANGSREYLDSIGLTKRQEGDLGPIYGFQWRHFGAEYID 126 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 +Y G +DQ+++I+Q +R PY RR I+SAWN A ++KMALPPCH QFYV Sbjct: 127 CKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALPPCHMFCQFYVHIPSN 186 Query: 156 --NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 +LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G+FIH +GD H+Y +H Sbjct: 187 NHRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVMGDCHIYKDHI 246 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL+RSPR P + +N +I D+ F +DF +++Y P+ I K+S+ Sbjct: 247 EALQQQLTRSPRPFPTLSLNRSITDIEDFTLDDFNIQNYHPYETIKMKMSI 297 >gi|169784213|ref|XP_001826568.1| thymidylate synthase [Aspergillus oryzae RIB40] gi|238508715|ref|XP_002385543.1| thymidylate synthase [Aspergillus flavus NRRL3357] gi|83775313|dbj|BAE65435.1| unnamed protein product [Aspergillus oryzae] gi|220688435|gb|EED44788.1| thymidylate synthase [Aspergillus flavus NRRL3357] Length = 333 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 132/305 (43%), Positives = 173/305 (56%), Gaps = 42/305 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 29 HQYLNLIRTILASGEYRPDRTGTGTRSIFAPPQLRFSLSKPAPNPADDPIPVLPLLTTKR 88 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++VV ELLWF+ G ++ L GV IWD ++ G+LGP+YG Q Sbjct: 89 VFLRAVVAELLWFISGCTSSLPLSDQGVKIWDGNGSREFLDKVGLDHREVGDLGPVYGFQ 148 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ +V L+ +P+ RR I+SAWN A + KMALPPCH Sbjct: 149 WRHFGAEYVDAKTDYTGQGVDQLAEVVHKLKNNPFDRRIIMSAWNPADLKKMALPPCHMF 208 Query: 150 FQFYVD-------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 QFYV G L CQLYQRS DV LG+PFNIASY+LLT M+A + G F+H Sbjct: 209 AQFYVSYPNGQDQKGHLHCQLYQRSCDVALGVPFNIASYALLTHMIAHAVDLHPGTFVHA 268 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAIL 259 +GD H+Y +H E QL R P P++ I + + ++ EDF + Y PH AI Sbjct: 269 MGDTHVYLDHVEPLQEQLVREPTEFPELKIRRDDRGSGVVDGWKPEDFEVVGYNPHKAIK 328 Query: 260 AKVSV 264 K+SV Sbjct: 329 MKMSV 333 >gi|330719294|ref|ZP_08313894.1| thymidylate synthase [Leuconostoc fallax KCTC 3537] Length = 324 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 176/319 (55%), Gaps = 56/319 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + +++ G+ + DRTG GTRS FG QMRF+L +GFP+LTTKKV + + ELLW Sbjct: 6 QQYLDLAKTILETGTHKSDRTGTGTRSLFGAQMRFNLQEGFPILTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L ++ IWDEW Sbjct: 66 FLRGDNNIRFLLQNNNHIWDEWAFKNWVTSSEYTGPDMTDFGLRAQSDPEFNQIYQEQKS 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGN------VIDQISSIVQSLRADPYS 125 +K G +G +YG WR W + D DQI +++ ++ P S Sbjct: 126 LFVDKILNDDDFMEKFGYIGEVYGKLWRDWENQDPMDQNATLHTDQIQNLIDGIKTTPDS 185 Query: 126 RRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLT 185 RR IVSAWN LP CH L QFYV +GKLS QLYQRS D+FLG+PFNIASYSLL Sbjct: 186 RRLIVSAWNAGSTPNAPLPSCHVLSQFYVADGKLSAQLYQRSADIFLGVPFNIASYSLLI 245 Query: 186 MMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYE 245 M+A+ G+ G+F+HTLGD H+YNNH Q + QLSR LP++ +NP + + + + Sbjct: 246 HMIAAQTGYAVGDFVHTLGDAHIYNNHVAQIETQLSRPMHPLPKLWLNPEVKSIFDYTMD 305 Query: 246 DFTLRSYEPHAAILAKVSV 264 D L Y AI A V+V Sbjct: 306 DIKLIDYTSEPAIKAPVAV 324 >gi|241762107|ref|ZP_04760190.1| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|283856542|ref|YP_163490.2| thymidylate synthase [Zymomonas mobilis subsp. mobilis ZM4] gi|59803072|sp|Q9Z671|TYSY_ZYMMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|241373357|gb|EER62957.1| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|283775549|gb|AAV90379.2| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ZM4] Length = 296 Score = 324 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 127/293 (43%), Positives = 177/293 (60%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL L+ +++ G R DRTGVGT S FG MRFDLSKG P+LTTKKV ++ + E+L Sbjct: 4 HQYLRLVSDILEKGDQRHDRTGVGTLSLFGAMMRFDLSKGRIPILTTKKVSYRLAIREML 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL GD+N+ L GVSIW +W K G+LGP Sbjct: 64 WFLSGDTNIRPLVEQGVSIWSDWPLARYQAETGALLSKKEFEAKILADTEFAKKWGDLGP 123 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG V DQI++++++L+++P SRR + WNVA + MALPPCH ++Q+ Sbjct: 124 VYGRQWRRWQGSDGQVYDQIATLIETLKSNPSSRRMLFHGWNVAELKDMALPPCHMVYQY 183 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS DVFLG+PFN+ + L MLA G G+ + T GDVH+Y N Sbjct: 184 HVTSDGRLNSLLYQRSADVFLGLPFNLVGAAALQAMLADQAGLALGDLVWTGGDVHIYRN 243 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +Q QL+R PR P++ + + + ++ EDF + Y+PH I V+V Sbjct: 244 HIDQMKEQLAREPRAFPRLELTRHPNSITDYKIEDFAITGYDPHPPIKGAVAV 296 >gi|260753698|ref|YP_003226591.1| thymidylate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553061|gb|ACV76007.1| thymidylate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 296 Score = 324 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 128/293 (43%), Positives = 178/293 (60%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL L+ +++ G R DRTGVGT S FG MRFDLSKG P+LTTKKV ++ + E+L Sbjct: 4 HQYLRLVSDILEKGDQRHDRTGVGTLSLFGAMMRFDLSKGRIPILTTKKVSYRLAIREML 63 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL GD+N+ L GVSIW +W K G+LGP Sbjct: 64 WFLSGDTNIRPLVEQGVSIWSDWPLARYQAETGALLSKKEFEAKILADTEFAKKWGDLGP 123 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG V DQI++++++L+++P SRR + WNVA + MALPPCH ++Q+ Sbjct: 124 VYGRQWRRWQGSDGQVYDQIATLIETLKSNPSSRRMLFHGWNVAELKDMALPPCHMVYQY 183 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS DVFLG+PFN+ + L MLA G G+ + T GDVH+Y N Sbjct: 184 HVTSDGRLNSLLYQRSADVFLGLPFNLVGAAALQAMLADQAGLALGDLVWTGGDVHIYRN 243 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +Q QL+R PRT P++ + + + ++ EDF + Y+PH I V+V Sbjct: 244 HIDQMKEQLAREPRTFPRLELMRHPNSITDYKIEDFAITGYDPHPPIKGAVAV 296 >gi|317495262|ref|ZP_07953632.1| thymidylate synthase [Gemella moribillum M424] gi|316914684|gb|EFV36160.1| thymidylate synthase [Gemella moribillum M424] Length = 310 Score = 324 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 138/313 (44%), Positives = 190/313 (60%), Gaps = 56/313 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +YL+L + +++ G + DRTGVGT+S FGYQM+FDL+KGFPLLTTKK+++ V ELLW Sbjct: 4 KEYLNLCKTILENGITKDDRTGVGTKSIFGYQMKFDLNKGFPLLTTKKINFNLVWSELLW 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ +L + +IW+EW Sbjct: 64 FIKGDTNIKFLLENKNNIWNEWAFKKWIESEEYTGPDMTDFGHRVLKDKDFAEEYKKQMN 123 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + K G+LG +YG QWR++ N IDQ+ ++++ ++ +P SRR IVS Sbjct: 124 IFKENILNDDNFSTKFGDLGNVYGKQWRNF-----NGIDQLKNVIEQIKINPSSRRLIVS 178 Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 AWN + +D MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASYSLLT+++A Sbjct: 179 AWNPSEVDTMALPPCHTMFQFYVSDGKLSCQLYQRSADVFLGVPFNIASYSLLTILIAKE 238 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G + GEF+HTLGD H+Y NHFEQ Q+SR LP + +N + + D L Sbjct: 239 CGLEVGEFVHTLGDAHIYVNHFEQVKEQMSRDAFKLPSLRLN-EFDSIFNLEISDVELID 297 Query: 252 YEPHAAILAKVSV 264 YE H I A ++V Sbjct: 298 YESHPFIKAPIAV 310 >gi|166164551|gb|ABY83774.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 641 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 177/282 (62%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 359 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 418 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 419 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 478 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ P SRR I+ AW V +DKMALPPCH L QFY+ +GKLSC Sbjct: 479 DNYENKGIDQLKNIINLIKNVPTSRRIILCAWYVKDLDKMALPPCHILCQFYIFDGKLSC 538 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 539 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 598 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP I ++ F DFT+ +Y H I ++ Sbjct: 599 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKISMDMA 640 >gi|197294226|ref|YP_001798767.1| thymidylate synthase [Candidatus Phytoplasma australiense] gi|171853553|emb|CAM11419.1| Thymidylate synthase [Candidatus Phytoplasma australiense] Length = 288 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 142/293 (48%), Positives = 195/293 (66%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLDL R ++K G ++ DRT GT+S FGYQMRF+L GFPLLTTKK+++K+++HELL Sbjct: 1 MKTYLDLCRFILKKGFNKEDRTKTGTKSVFGYQMRFNLQDGFPLLTTKKMYFKAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91 WFL+GD+N+SYL ++ V+IW++W + G LG Sbjct: 61 WFLKGDTNISYLVKNNVNIWNDWPYQKYQKSPHFKNETMEEFIQKIKKDKAFAGLHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + N DQI ++ ++ +P SRR I+S+WN + +M LPPCH L Q Sbjct: 121 PVYGKQWRDF-----NGFDQIKFLISEIKNNPDSRRLILSSWNPEQLHQMVLPPCHILMQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV GKLS QLYQRSGDVFLG+PFNIASY+LL +M+A V + GEFIHTLGD H+Y+N Sbjct: 176 FYVLEGKLSLQLYQRSGDVFLGVPFNIASYALLLLMVAQVTNLEVGEFIHTLGDAHIYHN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H Q +Q+ R+P+ LPQMI+NP+I D+ F +EDFTL++Y + +++ Sbjct: 236 HLNQIKIQIQRTPKKLPQMILNPHIKDIDGFSFEDFTLKNYFCDGTLKGDIAI 288 >gi|118937|sp|P20712|DRTS_PLACH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|160266|gb|AAA29587.1| dihydrofolate reductase/thymidylate synthase [Plasmodium chabaudi] Length = 583 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 127/282 (45%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 301 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLSEYFPLLTTKKLFVRGIIEELLW 360 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 361 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 420 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY +DQ+ +I+ ++ DP RR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 421 ADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 480 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH E +QL+ Sbjct: 481 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHVESLKVQLN 540 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R+P P + +NP I ++ F DFT+++Y H I ++ Sbjct: 541 RTPYPFPTLKLNPEIKNIEDFTISDFTVQNYVHHDKISMDMA 582 >gi|85057710|ref|YP_456626.1| thymidylate synthase [Aster yellows witches'-broom phytoplasma AYWB] gi|123738900|sp|Q2NJ46|TYSY_AYWBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|84789815|gb|ABC65547.1| thymidylate synthase [Aster yellows witches'-broom phytoplasma AYWB] Length = 288 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 147/293 (50%), Positives = 199/293 (67%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M+ YLDL R + + GS R+DRT GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL Sbjct: 1 MNTYLDLCRFIFQKGSFRKDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91 WFL+GD+N+ YL ++ V+IW+EW K G LG Sbjct: 61 WFLKGDTNIFYLVQNNVNIWNEWPYQKYQQSDFFQNETLKEFVKKIKNDPLFATKHGNLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + N +DQI ++ ++A+P SRR I+++WN +L+++MALPPCH L Q Sbjct: 121 PVYGKQWRDF-----NGVDQIKFLISEIKANPNSRRLILNSWNPSLLNQMALPPCHVLIQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V Q EFIHTLGD H+Y+N Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H Q Q+ R+P+ LPQMI+NP+I ++ F++ DF L++Y+ + ++V Sbjct: 236 HITQVQTQIQRTPKKLPQMILNPDIKNIDDFKFIDFILKNYQCDGILKGDIAV 288 >gi|329731575|gb|EGG67937.1| thymidylate synthase [Staphylococcus epidermidis VCU144] Length = 318 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 144/311 (46%), Positives = 186/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G LG +YG QWR W D +GN DQ+ +++Q ++ +P SRRHIVSAW Sbjct: 129 KERILNNDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKTVIQQIKNNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N A ID MALPPCH +FQFYV GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPAEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLNINTD-KSIFDINYEDLELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|222151325|ref|YP_002560481.1| thymidylate synthase [Macrococcus caseolyticus JCSC5402] gi|222120450|dbj|BAH17785.1| thymidylate synthase [Macrococcus caseolyticus JCSC5402] Length = 316 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 140/312 (44%), Positives = 190/312 (60%), Gaps = 52/312 (16%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +Y +LL+ +++ G D+ DRT GT S FG+QMRFDLSKGFPLLTTKKV +K V EL+WF Sbjct: 7 EYHNLLKLILETGKDKDDRTNTGTLSVFGHQMRFDLSKGFPLLTTKKVSFKLVATELIWF 66 Query: 63 LRGDSNVSYLHRHGVSIWDEW--------------------------------------- 83 +RGD+N+ YL + +IW+EW Sbjct: 67 IRGDTNIRYLLEYNNNIWNEWAFLKWIESDEYMGPDMTDFGHRALRDPEFNEQYREQLNI 126 Query: 84 -----------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 + G+LG +YG QWR + D V DQ+ +++ ++++P+SRRHIVSA Sbjct: 127 FKEKILTDDDFMQRFGDLGNVYGKQWRQFETKD-RVTDQLKEVIEQIKSNPHSRRHIVSA 185 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN I+ MALPPCH +FQFYV++ KLSCQLYQRS DVFLG+PFNIASYSLLT ++A Sbjct: 186 WNPGEIESMALPPCHTMFQFYVNDNKLSCQLYQRSADVFLGVPFNIASYSLLTHLVAREC 245 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + GEFIH++GD H+Y+NH E + QL RS P++ IN + D+ + YED + Y Sbjct: 246 GLEVGEFIHSMGDAHIYSNHIEAVETQLMRSSYEAPKLQINND-KDIFNIEYEDLEIIDY 304 Query: 253 EPHAAILAKVSV 264 H AI A ++V Sbjct: 305 TAHPAIKAPIAV 316 >gi|27468038|ref|NP_764675.1| thymidylate synthase [Staphylococcus epidermidis ATCC 12228] gi|33416238|ref|NP_877984.1| thymidylate synthase [Staphylococcus aureus] gi|42761440|ref|NP_976285.1| thymidylate synthase [Staphylococcus epidermidis] gi|57866926|ref|YP_188580.1| thymidylate synthase [Staphylococcus epidermidis RP62A] gi|57867484|ref|YP_189147.1| thymidylate synthase [Staphylococcus epidermidis RP62A] gi|221142630|ref|ZP_03567123.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|226464437|ref|YP_002790944.1| thymidylate synthase [Staphylococcus aureus] gi|227519931|ref|ZP_03949980.1| thymidylate synthase [Enterococcus faecalis TX0104] gi|251810861|ref|ZP_04825334.1| thymidylate synthase [Staphylococcus epidermidis BCM-HMP0060] gi|282876133|ref|ZP_06285000.1| thymidylate synthase [Staphylococcus epidermidis SK135] gi|282929387|ref|ZP_06336949.1| thymidylate synthase [Staphylococcus aureus A9765] gi|293366599|ref|ZP_06613276.1| thymidylate synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|302344744|ref|YP_003813114.1| thymidylate synthetase [Staphylococcus aureus] gi|59800406|sp|P0A0M5|TYSY_STAAU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901169|sp|Q5HMP6|TYSY_STAEQ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|82583715|sp|P0C0M5|TYSY_STAES RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|27315583|gb|AAO04717.1|AE016747_214 thymidylate synthase [Staphylococcus epidermidis ATCC 12228] gi|1762089|gb|AAC18954.1| ThyE [Staphylococcus epidermidis] gi|3676410|gb|AAC63226.1| thymidylate synthetase ThyE [Staphylococcus aureus] gi|13383308|dbj|BAB39485.1| thymidylate synthetase [Staphylococcus epidermidis] gi|33390922|gb|AAQ17128.1| thymidylate synthase [Staphylococcus aureus] gi|57637584|gb|AAW54372.1| thymidylate synthase [Staphylococcus epidermidis RP62A] gi|57638142|gb|AAW54930.1| thymidylate synthase [Staphylococcus epidermidis RP62A] gi|226434324|emb|CAR62446.1| thymidylate synthase ThyE [Staphylococcus aureus] gi|227072621|gb|EEI10584.1| thymidylate synthase [Enterococcus faecalis TX0104] gi|251805541|gb|EES58198.1| thymidylate synthase [Staphylococcus epidermidis BCM-HMP0060] gi|270299881|gb|ACZ68687.1| Thymidylate synthase [Staphylococcus aureus] gi|270300524|gb|ACZ69330.1| thymidylate synthase [Staphylococcus aureus] gi|281295158|gb|EFA87685.1| thymidylate synthase [Staphylococcus epidermidis SK135] gi|281334254|gb|ADA61338.1| Thymidylate synthase [Staphylococcus aureus] gi|282166683|gb|ADA80699.1| Thymidylate synthase [Staphylococcus aureus] gi|282591819|gb|EFB96873.1| thymidylate synthase [Staphylococcus aureus A9765] gi|291319368|gb|EFE59737.1| thymidylate synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|300492218|gb|ADK23693.1| thymidylate synthetase [Staphylococcus aureus] gi|302751821|gb|ADL65998.1| thymidylate synthase, ThyA_1 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|329735174|gb|EGG71466.1| thymidylate synthase [Staphylococcus epidermidis VCU045] gi|329737184|gb|EGG73438.1| thymidylate synthase [Staphylococcus epidermidis VCU028] Length = 318 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G+ R DRT GT S FG+Q+RFDL+KGFPLLTTKKV +K V ELLWF+ Sbjct: 9 YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68 Query: 64 RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84 +GD+N+ YL ++ +IW+EWA Sbjct: 69 KGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128 Query: 85 -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 K G LG +YG QWR W D +GN DQ+ S++Q ++ +P SRRHIVSAW Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAW 188 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N ID MALPPCH +FQFYV GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A G Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 + GEFIHT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYE 307 Query: 254 PHAAILAKVSV 264 H AI A ++V Sbjct: 308 SHPAIKAPIAV 318 >gi|302415413|ref|XP_003005538.1| bifunctional dihydrofolate reductase-thymidylate synthase [Verticillium albo-atrum VaMs.102] gi|261354954|gb|EEY17382.1| bifunctional dihydrofolate reductase-thymidylate synthase [Verticillium albo-atrum VaMs.102] Length = 326 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 126/307 (41%), Positives = 172/307 (56%), Gaps = 44/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56 HQYLDL+R+++ G R DRTG GT S F ++F L++ PLLTTK+V ++VV Sbjct: 20 HQYLDLVRNILDNGEHRPDRTGTGTYSIFAPTPLKFSLNQNGEPLLPLLTTKRVFLRAVV 79 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-- 102 ELLWF++G ++ L G+ IWD ++G+LGP+YG QWR + Sbjct: 80 AELLWFVQGSTSSIPLSEAGIKIWDGNGSREFLDSVGLSHREEGDLGPVYGFQWRHFGAE 139 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQ++ IV L+ +PY RR I+SAWN A + KMALPPCH QFYV Sbjct: 140 YVDAKTDYTGQGVDQLAEIVHKLKTNPYDRRIILSAWNPAHLKKMALPPCHMFAQFYVSY 199 Query: 156 -----------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 G L CQLYQRS D+ LG+PFNIASY+LLT M+A G Sbjct: 200 PRAKRGNAAVVDAEEKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIARACDLVPGS 259 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAA 257 H +GD H+Y +H + + QL R PR P + + D+ ++ EDF ++ Y+PH Sbjct: 260 LTHVMGDAHVYLDHVDALETQLEREPRAFPLLEMTREAGCDIDGWKAEDFVVKGYDPHKT 319 Query: 258 ILAKVSV 264 I K+SV Sbjct: 320 IAMKMSV 326 >gi|300871809|ref|YP_003786682.1| thymidylate synthase [Brachyspira pilosicoli 95/1000] gi|300689510|gb|ADK32181.1| thymidylate synthase [Brachyspira pilosicoli 95/1000] Length = 266 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 138/266 (51%), Positives = 181/266 (68%), Gaps = 2/266 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 M YL+LL+ V++ G D +DRTGVGTR F Q+RF P++TTK+V K V+ EL Sbjct: 1 MKNYLELLKKVLEEGEDTKDRTGVGTRRIFAPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 LWFL+G +N+ +L + V IWDEWAD GELGP+YG QWR+W +GN IDQIS++V +L Sbjct: 61 LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNVVNTL 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNI 178 R +P SRR+I++AWNV IDKM LPPCH + QF+V+N G + LYQRS D+FLG+PFNI Sbjct: 121 RNNPTSRRNILNAWNVGEIDKMHLPPCHMMCQFFVNNEGGIITHLYQRSADLFLGVPFNI 180 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 +SY++LT +LA G + E I T GD H+YNNH EQ LQLSR P + + Sbjct: 181 SSYAILTRLLAMHSGLKASELIMTFGDAHIYNNHMEQVKLQLSREPYEQTTELFIEERPN 240 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + S YEDF L Y+ H I A+V+V Sbjct: 241 IFSHVYEDFRLEGYKYHPTIKAEVAV 266 >gi|289466115|gb|ADC94828.1| dihydrofolate reductase-thymidylate synthase [Plasmodium billbrayi] Length = 608 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 126/282 (44%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIIMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 445 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAEFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607 >gi|289466117|gb|ADC94829.1| dihydrofolate reductase-thymidylate synthase [Plasmodium billbrayi] Length = 599 Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 126/282 (44%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 318 YQYLNIIYDIIMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 377 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 378 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 437 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 438 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 497 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 498 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAEFIHVLGNAHVYNNHIDSLKIQLN 557 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 558 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 599 >gi|6686065|sp|O96650|TYSY_ASCSU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|4039148|gb|AAC97507.1| thymidylate synthase [Ascaris suum] Length = 294 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 128/284 (45%), Positives = 168/284 (59%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +YL ++H+I G DRTGVGT S FG + L G PLLTTK+V+WK VV ELL Sbjct: 11 RKYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF++GD++ L GV IWD ++ G+LGPIYG QWR + Sbjct: 71 WFIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYHGT 130 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY G +DQ++ +++ ++ +P SRR I++AWNV + +MALPPCH L QF V NG+LS Sbjct: 131 DADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVKNGELS 190 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGD+ LG+PFN+ASY LLT M+A V + G H LGD H+Y NH + QL Sbjct: 191 CQLYQRSGDMGLGVPFNLASYGLLTHMIAHVCALKTGFLHHVLGDAHVYLNHIDALKEQL 250 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 SR PR P + I + F E L Y P A I ++V Sbjct: 251 SRDPRPFPTVHFEGRIDSIDDFTAESIILNGYNPMAPIKMPMAV 294 >gi|312210825|emb|CBX90911.1| similar to thymidylate synthase [Leptosphaeria maculans] Length = 353 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 135/307 (43%), Positives = 173/307 (56%), Gaps = 44/307 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRS-TFGYQMRFDLSK-----------GFPLLTTKK 49 +QYL L+R ++ G R DRTG GT + F QM+F LSK PLLTTK+ Sbjct: 47 YQYLSLIREILTNGEHRPDRTGTGTYAAPFPPQMKFALSKPSSDPSQPPIPILPLLTTKR 106 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD ++GELGP+YG Q Sbjct: 107 VFLRAVIGELLWFVAGSTHSKPLSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGFQ 166 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G IDQI+ I+ L+ PY RR I+SAWN A I KMALPPCH Sbjct: 167 WRHFGAEYKGHDADYTGQGIDQIAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHMF 226 Query: 150 FQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 QFYV G L LYQRS D+ LG+PFNIASY+LLT MLA V G Sbjct: 227 AQFYVSFPGHKQGQERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPGT 286 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAA 257 F HT+GD H+Y +H E LQL R PR P++ IN I + ++ +DF + Y+PHA+ Sbjct: 287 FTHTMGDAHVYADHVEALKLQLQREPREFPELKINREIGGSIDGWKADDFEVVGYKPHAS 346 Query: 258 ILAKVSV 264 I K+SV Sbjct: 347 IAMKMSV 353 >gi|70952417|ref|XP_745378.1| bifunctional dihydrofolate reductase-thymidylate synthase [Plasmodium chabaudi chabaudi] gi|56525682|emb|CAH78219.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Plasmodium chabaudi chabaudi] Length = 498 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 127/282 (45%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+F+LS+ FPLLTTKK+ + ++ ELLW Sbjct: 216 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLSEYFPLLTTKKLFVRGIIEELLW 275 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 276 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 335 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY +DQ+ +I+ ++ DP RR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 336 ADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 395 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH E +QL+ Sbjct: 396 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHVESLKVQLN 455 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R+P P + +NP I ++ F DFT+++Y H I ++ Sbjct: 456 RTPYPFPTLKLNPEIKNIEDFTISDFTVQNYVHHDKISMDMA 497 >gi|323342122|ref|ZP_08082355.1| thymidylate synthase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464547|gb|EFY09740.1| thymidylate synthase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 289 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 146/294 (49%), Positives = 196/294 (66%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL++ + V+ GS R DRTG GT FGYQMRFDLSKGFPLLTTKKVH+ S+ ELL Sbjct: 1 MKNYLEMCQFVLDEGSRREDRTGTGTTGVFGYQMRFDLSKGFPLLTTKKVHFPSLAKELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91 WF+ GD+N+ +L + V IW+EW K GELG Sbjct: 61 WFVSGDTNIKWLVENKVRIWNEWPYELFKKSDDYNGETMDEFIARIVADDLFAQKYGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR + +DQI++++++++ +PYSRR I+SAWN +D+MALPPCH Q Sbjct: 121 PVYGKQWRDF-----GGVDQINNVIETIKTNPYSRRIIMSAWNPTEVDQMALPPCHAFMQ 175 Query: 152 FYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 FYV ++ KLS QLYQRS DVFLG+PFNIASY+LL M+A V + GEF+HT GD+H+YN Sbjct: 176 FYVSNDRKLSLQLYQRSADVFLGVPFNIASYALLLHMIAKVCDLEVGEFVHTFGDLHIYN 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H++ +QL+R P++LPQ+II+ N + F++EDF + Y+PH I AKVSV Sbjct: 236 DHYDAVQMQLAREPKSLPQLIIHGNQEKITDFKFEDFEVVGYDPHPLIKAKVSV 289 >gi|322639437|gb|EFY36125.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] Length = 220 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 128/220 (58%), Positives = 167/220 (75%) Query: 45 LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY 104 +TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP Sbjct: 1 MTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTP 60 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 DG IDQI++++ L+ DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLY Sbjct: 61 DGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLY 120 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DVFLG+PFNIASY+LL M+A G+F+ T GD HLY+NH EQ LQLSR P Sbjct: 121 QRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREP 180 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R LP+++I L +R++DF + Y+PH I A V++ Sbjct: 181 RALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 220 >gi|259483658|tpe|CBF79227.1| TPA: hypothetical protein similar to thymidylate synthase (Broad) [Aspergillus nidulans FGSC A4] Length = 674 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 127/310 (40%), Positives = 174/310 (56%), Gaps = 47/310 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F MRF LSK PLLTTK+ Sbjct: 365 HQYLNLIRQILAEGEHRPDRTGTGTRSIFAPNPMRFSLSKPSPTNPSTKIPILPLLTTKR 424 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Q Sbjct: 425 VFLRAVLAELLWFISGSTSSIPLSEAGIKIWDGNGSREFLDKVGLSHREVGDLGPVYGFQ 484 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ IV+ ++ P+ RR I+SAWN A + KMALPPCH Sbjct: 485 WRHFGAEYVDAHTDYTGQGVDQLADIVRKIKETPFDRRIIMSAWNPADLKKMALPPCHMF 544 Query: 150 FQFYVD------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 Q+YV G+LSC LYQRS D+ LG+PFNIASY+LLT ++A G Sbjct: 545 AQYYVSYPEGIEDGKGKGKGELSCLLYQRSCDMGLGVPFNIASYALLTHIIAHATDLNPG 604 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEP 254 + IHT+GD H+Y +H E + QL+R P P++ I + ++ E+F + Y P Sbjct: 605 KLIHTMGDAHVYLDHVEALEEQLTREPTDFPELKIKREDRGSGVIDGWKEEEFEVIGYAP 664 Query: 255 HAAILAKVSV 264 H AI K+SV Sbjct: 665 HKAIKMKMSV 674 >gi|67541729|ref|XP_664632.1| hypothetical protein AN7028.2 [Aspergillus nidulans FGSC A4] gi|40742484|gb|EAA61674.1| hypothetical protein AN7028.2 [Aspergillus nidulans FGSC A4] Length = 654 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 127/310 (40%), Positives = 174/310 (56%), Gaps = 47/310 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F MRF LSK PLLTTK+ Sbjct: 345 HQYLNLIRQILAEGEHRPDRTGTGTRSIFAPNPMRFSLSKPSPTNPSTKIPILPLLTTKR 404 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Q Sbjct: 405 VFLRAVLAELLWFISGSTSSIPLSEAGIKIWDGNGSREFLDKVGLSHREVGDLGPVYGFQ 464 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ IV+ ++ P+ RR I+SAWN A + KMALPPCH Sbjct: 465 WRHFGAEYVDAHTDYTGQGVDQLADIVRKIKETPFDRRIIMSAWNPADLKKMALPPCHMF 524 Query: 150 FQFYVD------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 Q+YV G+LSC LYQRS D+ LG+PFNIASY+LLT ++A G Sbjct: 525 AQYYVSYPEGIEDGKGKGKGELSCLLYQRSCDMGLGVPFNIASYALLTHIIAHATDLNPG 584 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEP 254 + IHT+GD H+Y +H E + QL+R P P++ I + ++ E+F + Y P Sbjct: 585 KLIHTMGDAHVYLDHVEALEEQLTREPTDFPELKIKREDRGSGVIDGWKEEEFEVIGYAP 644 Query: 255 HAAILAKVSV 264 H AI K+SV Sbjct: 645 HKAIKMKMSV 654 >gi|290972164|ref|XP_002668828.1| predicted protein [Naegleria gruberi] gi|284082356|gb|EFC36084.1| predicted protein [Naegleria gruberi] Length = 535 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 126/286 (44%), Positives = 182/286 (63%), Gaps = 24/286 (8%) Query: 3 QYLDLLRH-VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLD+++ ++ + R +RTGVGT S FGYQM++ L FPLLTTK+V WK V EL Sbjct: 250 QYLDIIKELILSDINVREERTGVGTVSKFGYQMKYSLRNNVFPLLTTKRVFWKGVAKELF 309 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF+ G +N L + IWD ++ +LGP+YG QWR W Sbjct: 310 WFISGSTNAKILSEQDIHIWDGNGSREYLDSLGFENREEMDLGPVYGFQWRHWGSSYENM 369 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158 DY +DQ+ +++L+ +P +RR I+SAWNV+ + MALPPCH + QF+VD + Sbjct: 370 HTDYTNKGVDQLKKCIETLKNNPTNRRIILSAWNVSDLPNMALPPCHLMCQFWVDTDTNE 429 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 LSCQ+YQRS D+ LG+PFNIASY+LLT ++A V + G+FIHTLGD H+Y NH E Sbjct: 430 LSCQMYQRSCDMGLGVPFNIASYALLTRLMAQVCNLKPGDFIHTLGDTHVYKNHIEPLKK 489 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+ R P+ P ++++P+I ++ F++E TL++YEPHA I +++V Sbjct: 490 QIERDPKHFPLLLLDPSITNIDDFKFEHLTLQNYEPHATIKMEMAV 535 >gi|312077491|ref|XP_003141327.1| thymidylate synthase [Loa loa] gi|307763509|gb|EFO22743.1| thymidylate synthase [Loa loa] Length = 305 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 132/284 (46%), Positives = 170/284 (59%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 ++YLD +RH++K G DRTGVGT S FG + L G P+LTTK+V+WK VV ELL Sbjct: 22 NKYLDQIRHILKNGERIDDRTGVGTISVFGMHSVYSLRNGVVPVLTTKRVYWKGVVEELL 81 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102 WF+RGD+N +L GV IWD + +G+LGP+YG QWR Sbjct: 82 WFIRGDTNAKHLSEKGVRIWDANGSRQFLDQCGFNDRSEGDLGPVYGFQWRHCGAEYRGM 141 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 DY IDQ+S I+ ++ +P+SRR I+SAWNV + M LPPCH L QF V N +LS Sbjct: 142 DADYTNRGIDQLSEIIDLIKNEPHSRRIILSAWNVKDLKLMVLPPCHTLAQFAVRNDELS 201 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRSGD+ LG+PFN+ASY LLT M+A + G + G H LGD H+Y NH + QL Sbjct: 202 CQLYQRSGDMGLGVPFNLASYGLLTHMIAHICGLKAGYLCHVLGDAHVYVNHVDALQEQL 261 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PRT P + NI + F YE L +Y P I ++V Sbjct: 262 RRQPRTFPTVRFVGNIKTIDDFTYESIILENYRPMPTIKMAMAV 305 >gi|124505475|ref|XP_001351479.1| bifunctional dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum 3D7] gi|1655965|gb|AAC53680.1| dihydrofolate reductase-thymidylate synthase [synthetic construct] gi|23498237|emb|CAD49208.1| bifunctional dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum 3D7] gi|156067086|gb|ABU43153.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|156067088|gb|ABU43154.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|156067090|gb|ABU43155.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|156067092|gb|ABU43156.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|195957246|gb|ACG59401.1| dihydrofolate reductase/thymidylate synthase [Plasmodium falciparum] Length = 608 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607 >gi|160262|gb|AAA29585.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|623444|gb|AAB59212.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] Length = 608 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607 >gi|301598514|pdb|3JSU|A Chain A, Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase(Pfdhfr-Ts) Complexed With Qn254, Nadph, And Dump gi|301598515|pdb|3JSU|B Chain B, Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase(Pfdhfr-Ts) Complexed With Qn254, Nadph, And Dump Length = 608 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607 >gi|160264|gb|AAA29586.1| dihydrofolate reductase-thymidylate synthase (EC 1.5.1.3) (EC 2.1.1.45) [Plasmodium falciparum] Length = 608 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607 >gi|156067082|gb|ABU43151.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|156067084|gb|ABU43152.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] Length = 608 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607 >gi|118938|sp|P13922|DRTS_PLAFK RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|160260|gb|AAA29580.1| dihydrofolate reductase-thymidylate synthetase [Plasmodium falciparum] gi|195957244|gb|ACG59400.1| dihydrofolate reductase/thymidylate synthase [Plasmodium falciparum] Length = 608 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607 >gi|289466113|gb|ADC94827.1| dihydrofolate reductase-thymidylate synthase [Plasmodium billcollinsi] Length = 607 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 126/282 (44%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 325 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 384 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ +D +LGPIYG QWR + Sbjct: 385 FIRGETNGNTLLNKNVRIWEANGTRDFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 444 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +IV ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 445 DNYENKGVDQLKNIVDLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 504 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 505 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 564 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 565 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 606 >gi|198423472|ref|XP_002121808.1| PREDICTED: similar to Thymidylate synthase (TSase) (TS), partial [Ciona intestinalis] Length = 261 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 120/260 (46%), Positives = 155/260 (59%), Gaps = 20/260 (7%) Query: 24 VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83 GT+S FG QMRFDL FPLLTTK+V W+ V ELLWF+RG +N L V IWD Sbjct: 1 TGTKSIFGCQMRFDLRTSFPLLTTKRVFWRGVAEELLWFIRGSTNAKELADKNVHIWDAN 60 Query: 84 AD------------KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADP 123 ++ +LGP+YG QWR + DY +DQ+ ++ ++R +P Sbjct: 61 GSRKFLDNIGLTEREEFDLGPVYGFQWRHYGAEYKDMHSDYTNQGVDQLKKVIDTIRTNP 120 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183 RR I+ AWN + KMALPPCH QFYV NG+LSCQLYQRS D+ LG+PFNIASYSL Sbjct: 121 NDRRIIMCAWNPVDLPKMALPPCHAFAQFYVCNGELSCQLYQRSADMGLGVPFNIASYSL 180 Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 LT M+A V G + G+F+HTLGD H+Y NH E QL R PR P + ++ + Sbjct: 181 LTCMIAHVTGLKPGDFVHTLGDAHVYLNHIEPLKEQLKREPRPFPTLKFKRDVNSIDEIT 240 Query: 244 YEDFTLRSYEPHAAILAKVS 263 ED L Y+PH I +++ Sbjct: 241 MEDLVLEGYKPHKKIQMEMA 260 >gi|119486915|ref|XP_001262377.1| thymidylate synthase [Neosartorya fischeri NRRL 181] gi|119410534|gb|EAW20480.1| thymidylate synthase [Neosartorya fischeri NRRL 181] Length = 344 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 128/305 (41%), Positives = 175/305 (57%), Gaps = 42/305 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 40 HQYLNLIRTILSEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATPSSDPIPVLPLLTTKR 99 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Q Sbjct: 100 VFLRAVIAELLWFISGCTSSIPLSEAGIKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 159 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ +V+ L+ P+ RR I+SAWN A + KMALPPCH Sbjct: 160 WRHFGAEYIDAKTDYTGQGVDQLAEVVRKLKETPFDRRIIMSAWNPADLKKMALPPCHMF 219 Query: 150 FQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 QFYV + G LSC LYQRS D+ LG+PFNIASY+LLT +LA V G IHT Sbjct: 220 AQFYVSYPNGLDNKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHVTDLNPGTLIHT 279 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAIL 259 +GD H+Y +H + + QL R P P++ I + + ++ E+F + Y+PH AI Sbjct: 280 MGDAHVYLDHVDALNEQLKREPTEFPELRIKRDDRGSGVVDGWKEEEFEVVGYQPHKAIK 339 Query: 260 AKVSV 264 +SV Sbjct: 340 MNMSV 344 >gi|237733928|ref|ZP_04564409.1| thymidylate synthase [Mollicutes bacterium D7] gi|229383009|gb|EEO33100.1| thymidylate synthase [Coprobacillus sp. D7] Length = 286 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 130/289 (44%), Positives = 182/289 (62%), Gaps = 34/289 (11%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 + ++V++ G +R DRTG GTRS FGYQ R+DL GFPL+TTKK+ + + ELLWF++GD Sbjct: 1 MCKYVLENGENREDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFLRPIAEELLWFIKGD 60 Query: 67 SNVSYLHRHGVSIWDEWA-----------------------------DKDGELGPIYGVQ 97 +N+ YL V IW+EW K G+LGP+YG Q Sbjct: 61 TNIKYLVDRNVKIWNEWPYEDFKKSPDFNGETIEEFVEKIKTDDEFAKKHGDLGPVYGAQ 120 Query: 98 WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 WR + + +DQ++ +V SL +P+SRRHI+ AWN A +D MALPPCH QFYV Sbjct: 121 WRDF---NYEGVDQLAKLVDSLTNNPFSRRHIICAWNPAQVDNMALPPCHAFLQFYVSAD 177 Query: 158 K--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 K LSCQLYQRS D+FLG+PFNIASY+L+T MLA G++ EFIHT+GD H+Y +HFE Sbjct: 178 KKYLSCQLYQRSADIFLGVPFNIASYALMTEMLARTCGYEAKEFIHTIGDAHIYKDHFEV 237 Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q++R P ++++NP++ + ++ ED + Y+ H ++ KVSV Sbjct: 238 VKQQIAREPLPKCKLVLNPDVKSIFDYKIEDIKIEDYQSHGKLVGKVSV 286 >gi|85373857|ref|YP_457919.1| thymidylate synthase [Erythrobacter litoralis HTCC2594] gi|84786940|gb|ABC63122.1| thymidylate synthase [Erythrobacter litoralis HTCC2594] Length = 327 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 134/305 (43%), Positives = 177/305 (58%), Gaps = 43/305 (14%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL+R + GS+R DRTGVGTRS FG Q+RFDL+ G PLLTTK+V+WK+ E+LW Sbjct: 23 QYLDLMRRIWAEGSERVDRTGVGTRSVFGAQLRFDLADGAMPLLTTKRVYWKTATREMLW 82 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93 FL GD+N+ L GV IW+EW ++ G+LGP+ Sbjct: 83 FLTGDTNIRPLVLQGVKIWNEWPHARYVNETGEDIALDDFIQRIADDEAFAERWGDLGPV 142 Query: 94 YGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144 YG QW WP Y I+QI+ +V+SL+ +P SRRHI+ WNVA +D+MALP Sbjct: 143 YGKQWVDWPTYRYRKDGLYEKSEGINQIAEVVESLKTNPGSRRHIIEGWNVAELDRMALP 202 Query: 145 PCHCLFQFYVDNG-----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 PCH +QF+V +L+C LYQRS DV LG+PFN+ S +LL M+A + GE Sbjct: 203 PCHKTYQFHVAKDDQGRDRLNCLLYQRSCDVALGLPFNLWSAALLQRMMAQQTDLEPGEL 262 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 + GD HLY NH QL+R P+ P + I + +R EDF + +YEPH I Sbjct: 263 VWMGGDTHLYLNHEHLITEQLNREPQGHPTLEIVRRPDSIFDYRIEDFVVHNYEPHPPIK 322 Query: 260 AKVSV 264 A V+V Sbjct: 323 APVAV 327 >gi|225619118|ref|YP_002720344.1| thymidylate synthase [Brachyspira hyodysenteriae WA1] gi|254790229|sp|C0QWM9|TYSY_BRAHW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|225213937|gb|ACN82671.1| thymidylate synthase [Brachyspira hyodysenteriae WA1] Length = 266 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 138/266 (51%), Positives = 179/266 (67%), Gaps = 2/266 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 M YLDLL+ V++ G + +DRTGVGTR FG Q+RF P++TTK+V K V+ EL Sbjct: 1 MQNYLDLLKKVLEEGEETKDRTGVGTRRIFGPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 LWFL+G +N+ +L + V IWDEWAD GELGP+YG QWR+W +GN IDQIS+IV +L Sbjct: 61 LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNIVNTL 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNI 178 R +P SRR I++AWNV ID+M LPPCH + QF V+ G + LYQRS D+FLG+PFNI Sbjct: 121 RNNPASRRIILNAWNVGEIDQMHLPPCHMMCQFSVNSKGGIITHLYQRSADLFLGVPFNI 180 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 +SY++LT +LA G E I T GD H+YNNH EQ LQLSR P + N + Sbjct: 181 SSYAILTRLLAMHSGLHASELIMTFGDAHIYNNHIEQVKLQLSREPLEQTTELFIDNRPN 240 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + S YEDF L Y+ + I A+V+V Sbjct: 241 IFSHVYEDFKLEGYKYYPTIKAEVAV 266 >gi|82540717|ref|XP_724655.1| thymidylate synthase [Plasmodium yoelii yoelii str. 17XNL] gi|23479372|gb|EAA16220.1| thymidylate synthase, putative [Plasmodium yoelii yoelii] Length = 588 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 126/282 (44%), Positives = 180/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 306 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLNQYFPLLTTKKLFVRGIIEELLW 365 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 366 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 425 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y +DQ+ +I+ ++ DP RR I+ AWNV +DKMALPPCH L QFYV +GKLSC Sbjct: 426 DNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDKMALPPCHILCQFYVFDGKLSC 485 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH E +QL+ Sbjct: 486 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHIESLKIQLN 545 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R+P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 546 RTPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKISMDMA 587 >gi|12045082|ref|NP_072893.1| thymidylate synthase [Mycoplasma genitalium G37] gi|1351340|sp|P47469|TYSY_MYCGE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|3844830|gb|AAC71448.1| thymidylate synthase [Mycoplasma genitalium G37] gi|166078915|gb|ABY79533.1| thymidylate synthase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 287 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 135/293 (46%), Positives = 189/293 (64%), Gaps = 35/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL +V+ G R++RT T S FGYQM+FDL+ FPLLTTKKV+WK++VHELL Sbjct: 1 MKQYLDLASYVLANGKKRKNRTDTDTLSVFGYQMKFDLTNSFPLLTTKKVNWKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91 WF++GD+N+ YL +GV+IW+EW ++ +LG Sbjct: 61 WFIKGDTNIKYLVDNGVNIWNEWPYENFKKSPSFQNETLQEFILKVKTDNEFAKQFADLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ N +DQ+ ++Q ++ +P SRR IVS+WN + ++KMAL PCH LFQ Sbjct: 121 PVYGKQWRNF-----NGVDQLKKVIQEIKENPNSRRLIVSSWNPSELEKMALAPCHSLFQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV+ KLS QLYQRSGD+FLG+PFNIASY+LL ++A + G FIHTLGD H+Y N Sbjct: 176 FYVEEDKLSLQLYQRSGDIFLGVPFNIASYALLVYLVAHETKLKPGYFIHTLGDAHIYEN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ LQL+R+ PQ+++ + + ++ ++D L Y H I +V+V Sbjct: 236 HIEQIKLQLTRTTLDPPQVVLKSD-KSIFAYSFDDIELVGYNYHPFIYGRVAV 287 >gi|39944952|ref|XP_362013.1| hypothetical protein MGG_04458 [Magnaporthe oryzae 70-15] gi|145021519|gb|EDK05648.1| hypothetical protein MGG_04458 [Magnaporthe oryzae 70-15] Length = 339 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 126/321 (39%), Positives = 172/321 (53%), Gaps = 58/321 (18%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R ++ G R DRTG GT S F ++F L+K PLLTTK+V ++V+ Sbjct: 19 YQYLDLVREILDNGEHRPDRTGTGTYSIFAPRPLKFSLNKDGTPILPLLTTKRVFSRAVI 78 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102 ELLWF+ G ++ L GV IWD ++ G+LGP+YG QWR + Sbjct: 79 LELLWFVSGATSAKPLSDAGVKIWDGNGSREFLDGLGLQHREVGDLGPVYGFQWRHFGAE 138 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQ++ +V LR +PY RR ++SAWN + M LPPCH QFYV Sbjct: 139 YTDCHADYTGQGVDQLAEVVHKLRTNPYDRRMVLSAWNPKDLKLMVLPPCHMFAQFYVSY 198 Query: 156 --------------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 G L CQLYQRS D+ LG+PFNIASY+LLT M+A Sbjct: 199 PKAGSDSNGNGNTTEGADQTSSPSKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIA 258 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-PNIVD-----LLSFR 243 G G H +GD H+Y +H + QL R PR P++ IN P + + + ++ Sbjct: 259 RATGLVPGSLTHVMGDAHVYADHVDALRTQLEREPRPFPELEINRPEVPEGGDGVIDGWK 318 Query: 244 YEDFTLRSYEPHAAILAKVSV 264 EDF ++ Y+PH AI K+SV Sbjct: 319 LEDFVIKGYDPHKAIAMKMSV 339 >gi|296111709|ref|YP_003622091.1| thymidylate synthase [Leuconostoc kimchii IMSNU 11154] gi|295833241|gb|ADG41122.1| thymidylate synthase [Leuconostoc kimchii IMSNU 11154] Length = 322 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 138/317 (43%), Positives = 180/317 (56%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + V+ G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV++ + ELLW Sbjct: 6 QQYLDLAQKVLNEGALKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVYFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87 FLRGD+N+ +L +H IWDEWA K+ Sbjct: 66 FLRGDNNIRFLLQHNNHIWDEWAFKNWVESDQYTGPDMTNFGHRAIEDPEFAATYKIQKD 125 Query: 88 ----------------GELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127 G +G +YG WR+W D IDQ+S +V ++ P SRR Sbjct: 126 IFVDKILNDDDFMATFGYVGDVYGKLWRNWETTSLNADEGTIDQVSRLVHDIKTTPDSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSVQLYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ G+F+HT+GD H+YNNH +Q QLSR LP++ +NP + L + +D Sbjct: 246 VAAQTGYEVGDFVHTIGDTHIYNNHVDQITEQLSRPMHQLPKIWLNPEVKSLFDYTMDDI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + YE AI A V+V Sbjct: 306 KILDYESEPAIKAPVAV 322 >gi|302926083|ref|XP_003054223.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256735164|gb|EEU48510.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 326 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 125/302 (41%), Positives = 172/302 (56%), Gaps = 39/302 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56 HQYLDL++ +++ G R DRTG GT S F ++F L+ PLLTTK+V ++V+ Sbjct: 25 HQYLDLVKEILETGERRPDRTGTGTYSIFAPRPLKFALNNNGTPILPLLTTKRVFTRAVI 84 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102 ELLWF+ G+++ + L G+ IWD ++ G+LGP+YG QWR + Sbjct: 85 AELLWFVEGNTSSTSLSEAGIKIWDGNGSREFLDNLGLNHREVGDLGPVYGFQWRHFGAE 144 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQ++ I+ LR +PY RR I+SAWN A + KM LPPCH QFYV Sbjct: 145 YVDAKTDYTGQGVDQLAEIIHKLRTNPYDRRLILSAWNPADLKKMVLPPCHMFAQFYVSY 204 Query: 156 ------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 G L CQLYQRS D+ LG+PFNIASY+LLT M+A V G H + Sbjct: 205 PRRKDGDPETKPQGHLHCQLYQRSCDMGLGVPFNIASYALLTHMMAHVCELVPGSLTHVM 264 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKV 262 GD H+Y +H E + QL R PR P++ I + ++ EDF ++ Y+PH I K+ Sbjct: 265 GDAHVYLDHVEALNTQLEREPRDFPELEITREKGGSIDGWKAEDFVIKGYDPHKTIAMKM 324 Query: 263 SV 264 SV Sbjct: 325 SV 326 >gi|121714363|ref|XP_001274792.1| thymidylate synthase [Aspergillus clavatus NRRL 1] gi|119402946|gb|EAW13366.1| thymidylate synthase [Aspergillus clavatus NRRL 1] Length = 332 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 128/305 (41%), Positives = 173/305 (56%), Gaps = 42/305 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 28 HQYLNLIRTILAEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATSTADRIPVLPLLTTKR 87 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+YG Q Sbjct: 88 VFLRAVLAELLWFISGCTSSLPLSEAGVKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 147 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ +V+ L+ P+ RR I+SAWN A + KMALPPCH Sbjct: 148 WRHFGAEYVDAKTDYAGQGVDQLAEVVRKLKDTPFDRRIIMSAWNPADLKKMALPPCHMF 207 Query: 150 FQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 QFYV G LSC LYQRS D+ LG+PFNIASY+LLT +LA G IHT Sbjct: 208 AQFYVSYPDGLDRKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHATDLNPGTLIHT 267 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAIL 259 +GD H+Y +H + + QL R P P++ I + + ++ E+F + Y+PH AI Sbjct: 268 MGDAHVYLDHVDALEEQLKREPTEFPELRIKRDDRGSGVVDGWKEEEFEVIGYQPHKAIK 327 Query: 260 AKVSV 264 +SV Sbjct: 328 MNMSV 332 >gi|212531339|ref|XP_002145826.1| thymidylate synthase [Penicillium marneffei ATCC 18224] gi|210071190|gb|EEA25279.1| thymidylate synthase [Penicillium marneffei ATCC 18224] Length = 311 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 122/304 (40%), Positives = 167/304 (54%), Gaps = 41/304 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-----QMRFDLSKGFPLLTTKKVHWKSVV 56 +QYLDL+R ++ G R DRTG GT S F Q+ + PLLTTK+V ++V+ Sbjct: 8 NQYLDLIREILDHGERRPDRTGTGTLSIFAPRPFKFQLNDNGRPILPLLTTKRVFLRAVI 67 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102 ELLWF+ G+++ L+ GV IWD ++ G+LGP+YG QWR + Sbjct: 68 AELLWFIEGNTSSIALNEVGVKIWDGNGSREFLDNLGLTHREVGDLGPVYGFQWRHFGAE 127 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQI+ I+ LR +PY RR I++AWN + M LPPCH QFYV Sbjct: 128 YKDAKADYTGEGVDQIADIIHKLRNNPYDRRMILTAWNPKDLKLMVLPPCHMFAQFYVSF 187 Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 G L CQLYQRS D+ LG+PFNIASY+LLT MLA V G H Sbjct: 188 PGQGLAETTSENKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGSLTH 247 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILA 260 +GD H+Y +H + +QL R PR P++ I + ++ E+F ++ Y+PH AI Sbjct: 248 VMGDAHVYLDHVDALKVQLEREPRPFPELEITREKGASIDGWKAEEFVVKGYDPHKAIAM 307 Query: 261 KVSV 264 +SV Sbjct: 308 NMSV 311 >gi|15809582|gb|AAK55761.1| dihydrofolate reductase/thymidylate synthase [Plasmodium gallinaceum] Length = 589 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ VI G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 307 YQYLNIIYDVIMNGNKQGDRTGVGVVSKFGYMMKFNLNQYFPLLTTKKLFIRGIIEELLW 366 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 367 FIRGETNGNTLLNKNVRIWEANGTREFLDKRKLFDREVNDLGPIYGFQWRHFGAEYTNMH 426 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFYV + KLSC Sbjct: 427 DNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYVFDNKLSC 486 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + QL+ Sbjct: 487 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKKQLN 546 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F+ DFT+ +Y H I ++ Sbjct: 547 RIPYPFPTLKLNPDIKNIEDFKVSDFTIENYVHHDKISMDMA 588 >gi|169854361|ref|XP_001833855.1| thymidylate synthase [Coprinopsis cinerea okayama7#130] gi|116504990|gb|EAU87885.1| thymidylate synthase [Coprinopsis cinerea okayama7#130] Length = 319 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 125/295 (42%), Positives = 166/295 (56%), Gaps = 32/295 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59 +QYL L+R V+ G R DRTG GT + F RF L PLLTTK+ + ++ EL Sbjct: 25 YQYLSLIRRVLDTGDIRPDRTGTGTIALFAPPSFRFSLLDATLPLLTTKRTFLRGIIEEL 84 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ G ++ L G+ IWD K+ G+LGP+YG QWR + Sbjct: 85 LWFVHGCTDSKLLSEKGIKIWDGNGSKEFLESRGLGHRREGDLGPVYGFQWRHFGAEYVD 144 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154 DY G +DQ+ ++ ++ +P RR I+SAWN I +MALPPCH + QFYV Sbjct: 145 CDADYTGQGVDQLRECIKKIKENPTDRRIILSAWNPKDIPQMALPPCHMMCQFYVQLPPQ 204 Query: 155 ----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 +LSC +YQRS D+ LGIPFNIASY+LLT M+A V G + E I LGD H+Y Sbjct: 205 SDPTRKPRLSCLMYQRSADLGLGIPFNIASYALLTHMIAHVTGTEAHELIIQLGDAHVYR 264 Query: 211 NHFEQADLQLSRSPRTLPQMIINPN-IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H E + QL R PR P++ IVD+ F+YEDF + Y PH I K+SV Sbjct: 265 DHVEALEEQLKREPRPFPKIRWAREGIVDIEDFKYEDFVVEGYNPHGPIAMKMSV 319 >gi|296222342|ref|XP_002757145.1| PREDICTED: thymidylate synthase-like isoform 2 [Callithrix jacchus] Length = 279 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 120/274 (43%), Positives = 159/274 (58%), Gaps = 38/274 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110 ++G +N L GV IWD +D G+LGP+YG QWR + + +D Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGA-EYRDMD 150 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 + + MALPPCH L QFYV NG+LSCQLYQRSGD+ Sbjct: 151 -------------------------SDLPLMALPPCHALCQFYVVNGELSCQLYQRSGDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E +QL R PR P++ Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I + + F+ EDF + Y PH I +++V Sbjct: 246 KILRKVEKIDDFKAEDFKVEGYNPHPTIKMEMAV 279 >gi|26554141|ref|NP_758075.1| thymidylate synthase [Mycoplasma penetrans HF-2] gi|38258786|sp|Q8EV81|TYSY_MYCPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|26454149|dbj|BAC44479.1| thymidylate synthase [Mycoplasma penetrans HF-2] Length = 289 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 135/294 (45%), Positives = 188/294 (63%), Gaps = 35/294 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +Y DLL+ V+ G + +RT + FG Q R+DL+KGFPLLTTKK+ +K++ HELL Sbjct: 1 MKEYKDLLKLVLDNGIMQENRTDTDAIAYFGTQSRYDLTKGFPLLTTKKMAYKAIFHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91 WFL+G++N+ YL + V IW+EW ++ GELG Sbjct: 61 WFLKGETNIKYLVDNNVKIWNEWPYENYKKSPYFKNESIDEFILKIKEDDSFAKQFGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ N +DQI+++++ ++ + YSRR IVS WN + I M LPPCHCLFQ Sbjct: 121 PVYGRQWRNF-----NGVDQITNLIEEIKKNKYSRRLIVSVWNPSEIKNMLLPPCHCLFQ 175 Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 F+V+ +LSCQLYQRS D+FLG+PFNIASYSLLT M+A V EF+HT+G H+YN Sbjct: 176 FFVNSKNELSCQLYQRSADLFLGVPFNIASYSLLTYMIAQVTNTTAKEFVHTIGVAHIYN 235 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NH +Q QL+R P LP +++N NI ++ F+ ED ++ Y H AI KV+V Sbjct: 236 NHIDQVKEQLTREPLQLPTLVLNKNIKNIFDFKIEDIEIKDYNSHPAIKGKVAV 289 >gi|70982167|ref|XP_746612.1| thymidylate synthase [Aspergillus fumigatus Af293] gi|66844235|gb|EAL84574.1| thymidylate synthase [Aspergillus fumigatus Af293] gi|159122153|gb|EDP47275.1| thymidylate synthase [Aspergillus fumigatus A1163] Length = 344 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 128/305 (41%), Positives = 174/305 (57%), Gaps = 42/305 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 40 HQYLNLIRTILAEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATPSSDPIPILPLLTTKR 99 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Q Sbjct: 100 VFLRAVIAELLWFISGCTSSIPLSEAGIKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 159 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQ++ +V+ L+ P+ RR I+SAWN A + KMALPPCH Sbjct: 160 WRHFGAEYIDAKTDYTGQGVDQLAEVVRKLKETPFDRRIIMSAWNPADLKKMALPPCHMF 219 Query: 150 FQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 QFYV + G LSC LYQRS D+ LG+PFNIASY+LLT +LA G IHT Sbjct: 220 AQFYVSYPNGLDNKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHATDLNPGTLIHT 279 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAIL 259 +GD H+Y +H + + QL R P P++ I N + ++ E+F + Y+PH AI Sbjct: 280 MGDAHVYLDHVDALNEQLKREPTEFPELRIKRNDRGSGVVDGWKEEEFEVVGYQPHKAIK 339 Query: 260 AKVSV 264 +SV Sbjct: 340 MNMSV 344 >gi|32491069|ref|NP_871323.1| thymidylate synthase [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|30173417|sp|Q8D2N4|TYSY_WIGBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|25166276|dbj|BAC24466.1| thyA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 264 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 142/264 (53%), Positives = 188/264 (71%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YLDLL ++K G + DRT GT S FGYQ+R +L++GFPLLTTK H+KS+V+ELL Sbjct: 1 MKEYLDLLNLILKNGYPKIDRTKTGTLSMFGYQIRINLNEGFPLLTTKYCHFKSIVYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFLRGD+N+S+L ++ +SIW++WADK+G LGPIYG QWR+W D N IDQI + L+ Sbjct: 61 WFLRGDTNISFLKKNNISIWNKWADKNGNLGPIYGKQWRAWEDKKNNTIDQIEIALNKLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P SRR +VS+WNV +D M++PPCH LFQ YV N KLSCQ+YQRS D+FLG+PFNI S Sbjct: 121 KEPSSRRILVSSWNVGELDLMSIPPCHVLFQLYVINNKLSCQVYQRSCDIFLGLPFNIGS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LLT + A+ + I T GD+HLY NH QA LQL+RSP LP++ I +L Sbjct: 181 YALLTHIFANQCDLLVEDLIWTGGDIHLYKNHLNQAKLQLTRSPLPLPKIFIKKKPKNLF 240 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 ++ + DF L Y H I A +S+ Sbjct: 241 NYAFNDFLLIDYNHHPKIKAPISI 264 >gi|116490829|ref|YP_810373.1| thymidylate synthase [Oenococcus oeni PSU-1] gi|290890274|ref|ZP_06553353.1| hypothetical protein AWRIB429_0743 [Oenococcus oeni AWRIB429] gi|122276989|sp|Q04FR4|TYSY_OENOB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116091554|gb|ABJ56708.1| thymidylate synthase [Oenococcus oeni PSU-1] gi|290480060|gb|EFD88705.1| hypothetical protein AWRIB429_0743 [Oenococcus oeni AWRIB429] Length = 319 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 128/314 (40%), Positives = 175/314 (55%), Gaps = 51/314 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R +++ G+ + DRT GT S FG QMRFDLS+GFPLLT+KKV + + ELLW Sbjct: 6 EQYLNLARRILETGASKMDRTKTGTHSIFGAQMRFDLSEGFPLLTSKKVAFGRIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEW Sbjct: 66 FLRGDNNIRFLLQHHNHIWDEWPFKKWVESNEYKGPDMTDFGLRTQKDPIFAEQYKEQKK 125 Query: 85 -------------DKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSLRADPYSRRHIV 130 K G +G +YG WR WPD D +DQI+ ++ ++ +P SRR I+ Sbjct: 126 IFVDRILNDDEFSKKFGTIGDVYGKLWRHWPDANDDGSVDQITRLINEIKVNPNSRRLIL 185 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 +AW+ LP CH + QFYV +GK+S Q+YQRS D FLG+PFNIASYSLL M+A+ Sbjct: 186 TAWDPETTPFATLPSCHVMSQFYVVDGKISLQMYQRSADYFLGVPFNIASYSLLLSMVAA 245 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G + GEFIHT+GD H+YNNH +Q QLS+ LP + +NP++ + + D L Sbjct: 246 QTGLEVGEFIHTIGDAHIYNNHVDQIKEQLSKPTHKLPTLKLNPDVKSIFDYEMSDIKLE 305 Query: 251 SYEPHAAILAKVSV 264 +Y I A ++V Sbjct: 306 NYIHEDVIKAPIAV 319 >gi|84501616|ref|ZP_00999788.1| Thymidylate synthase [Oceanicola batsensis HTCC2597] gi|84390237|gb|EAQ02796.1| Thymidylate synthase [Oceanicola batsensis HTCC2597] Length = 298 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 135/293 (46%), Positives = 180/293 (61%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLDLL V++ G +R DRTGVGTRS FG +RFDLS+ P+LTTK+V+WK+ V E+L Sbjct: 6 YQYLDLLSQVLENGDERTDRTGVGTRSIFGAMVRFDLSEDTVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92 WFL G +N+ L R V IW D +A + GELGP Sbjct: 66 WFLTGGTNIQPLLRENVRIWTDWPLATYRRETGEDIGQDVFEQRILEDDAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +V++LR +P SRR + WNVA + MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWLGSDGKEHDQIADLVRTLRENPASRRMLFHGWNVAELGGMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+C L+QRS D+ LG PFN + L +MLA G + GE + GDVHLY N Sbjct: 186 HVTTDGRLNCLLFQRSADLLLGAPFNYVGATSLQLMLAQQAGLRPGELVWVGGDVHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q+SR PR LP+M + + +R EDF + Y PHAAI A+V+V Sbjct: 246 HLDQAREQMSREPRPLPRMRLLRQAESIDGYRIEDFEVEGYAPHAAIRAEVAV 298 >gi|255538724|ref|XP_002510427.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Ricinus communis] gi|223551128|gb|EEF52614.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Ricinus communis] Length = 591 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 121/280 (43%), Positives = 159/280 (56%), Gaps = 20/280 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL L +I G+ + DRTG GT S FG QM+++L K FPLLTTK+V W VV ELLW Sbjct: 306 YMYLRLAEQIISNGTLKDDRTGTGTLSKFGGQMQYNLRKSFPLLTTKRVFWMGVVEELLW 365 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G +N L G+ IWD A +D +LGPIYG QWR + Sbjct: 366 FISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKDIEESDLGPIYGFQWRYFGARYTDMH 425 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G DQ+ ++ +++ P R I+ +WN + + MA PPCH QFYV NG+LSC Sbjct: 426 ADYSGQGFDQLVDVIDKIKSKPDDRCIILRSWNPSDLKLMAFPPCHMFAQFYVANGELSC 485 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 Q+YQRS D+ LG+PFNIA Y+LLT ++A V G+FIH +GD + H QL Sbjct: 486 QMYQRSADIGLGVPFNIAFYALLTCIIAHVCALVPGDFIHLIGDARVCTTHIGPLQKQLQ 545 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 + P P + INP D+ SF DF L Y+PH I K Sbjct: 546 KLPTPFPILRINPAKKDIDSFEASDFQLIGYDPHEYIDMK 585 >gi|289466109|gb|ADC94825.1| dihydrofolate reductase-thymidylate synthase [Plasmodium reichenowi] Length = 598 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 317 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 376 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 377 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 436 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 437 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 496 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 497 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 556 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 557 RIPYPFPTLKLNPDIKNIEDFTILDFTIQNYVHHEKISMDMA 598 >gi|126740659|ref|ZP_01756345.1| Thymidylate synthase [Roseobacter sp. SK209-2-6] gi|126718174|gb|EBA14890.1| Thymidylate synthase [Roseobacter sp. SK209-2-6] Length = 325 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 131/293 (44%), Positives = 182/293 (62%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 +QYLDL+ V++ G R DRTGVGTRS FG +RFDLS G P+LTTK+V+WK+ + E+L Sbjct: 33 YQYLDLMEQVLEKGDKRVDRTGVGTRSLFGAMLRFDLSDGTAPILTTKRVYWKTAIKEML 92 Query: 61 WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92 WFL G +N+ L R V IW D +A + GELGP Sbjct: 93 WFLTGGTNIQPLLRDNVRIWSDWPLATYRSETGEEISQEDFEQRILEDDAFATRWGELGP 152 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +++SLR P SRR + WNVA + +MALPPCH ++Q+ Sbjct: 153 VYGKQWRRWMGADGQEHDQITGLIKSLRETPASRRMLFHGWNVAELSEMALPPCHMVYQY 212 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+C L+QRS D+ LG+PFN S L +MLA G + GE + GDVHLY N Sbjct: 213 HVTSDGRLNCLLFQRSVDLLLGMPFNCVGASALQLMLAQQAGLRPGELVWVGGDVHLYLN 272 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q++R PR LPQ+ + + ++ S++ DF++ Y+PH I A+V+V Sbjct: 273 HLDQAREQMAREPRPLPQISLTRHPENIDSYKISDFSVEGYDPHPPIAAEVAV 325 >gi|258577885|ref|XP_002543124.1| thymidylate synthase [Uncinocarpus reesii 1704] gi|237903390|gb|EEP77791.1| thymidylate synthase [Uncinocarpus reesii 1704] Length = 347 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 129/311 (41%), Positives = 169/311 (54%), Gaps = 48/311 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49 HQYL+L+R ++ G R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 37 HQYLNLIRSILTTGEHRPDRTGTGTRSLFAPPQLRFSLSKPGPASSSAPIPILPLLTTKR 96 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+YG Q Sbjct: 97 VFLRAVILELLWFVSGSTSSIPLSEAGVKIWDGNGSREFLDSVGLSHRDVGDLGPVYGFQ 156 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQI +V+ L+ +PY RR I+SAWN A + KMALPPCH Sbjct: 157 WRHFGAEYVDAKADYTGKGVDQIVEVVRKLKENPYDRRIILSAWNPADLKKMALPPCHMF 216 Query: 150 FQFYVD-------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196 QFYV G L C LYQRS D+ LG+PFNIASY++LT MLA Sbjct: 217 AQFYVSFAPDANGETGKRQKGTLHCLLYQRSCDMGLGVPFNIASYAILTHMLAHAADLYP 276 Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSYE 253 G HT+GD H+Y +H E QL+R P P++ I ++ + DF + Y+ Sbjct: 277 GTLTHTMGDAHVYLDHVEALQEQLTREPTAFPELKIKREDRGSGEMDGWEESDFEVIGYK 336 Query: 254 PHAAILAKVSV 264 PH I K+SV Sbjct: 337 PHKMIKMKMSV 347 >gi|118587059|ref|ZP_01544489.1| thymidylate synthase [Oenococcus oeni ATCC BAA-1163] gi|118432469|gb|EAV39205.1| thymidylate synthase [Oenococcus oeni ATCC BAA-1163] Length = 331 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 128/314 (40%), Positives = 175/314 (55%), Gaps = 51/314 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L R +++ G+ + DRT GT S FG QMRFDLS+GFPLLT+KKV + + ELLW Sbjct: 18 EQYLNLARRILETGASKMDRTKTGTHSIFGAQMRFDLSEGFPLLTSKKVAFGRIKSELLW 77 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84 FLRGD+N+ +L +H IWDEW Sbjct: 78 FLRGDNNIRFLLQHHNHIWDEWPFKKWVESNEYKGPDMTDFGLRTQKDPIFAEQYKEQKK 137 Query: 85 -------------DKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSLRADPYSRRHIV 130 K G +G +YG WR WPD D +DQI+ ++ ++ +P SRR I+ Sbjct: 138 IFVDRILNDDEFSKKFGTIGDVYGKLWRHWPDANDDGSVDQITRLINEIKVNPNSRRLIL 197 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 +AW+ LP CH + QFYV +GK+S Q+YQRS D FLG+PFNIASYSLL M+A+ Sbjct: 198 TAWDPETTPFATLPSCHVMSQFYVVDGKISLQMYQRSADYFLGVPFNIASYSLLLSMVAA 257 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250 G + GEFIHT+GD H+YNNH +Q QLS+ LP + +NP++ + + D L Sbjct: 258 QTGLEVGEFIHTIGDAHIYNNHVDQIKEQLSKPTHKLPTLKLNPDVKSIFDYEMSDIKLE 317 Query: 251 SYEPHAAILAKVSV 264 +Y I A ++V Sbjct: 318 NYIHEDVIKAPIAV 331 >gi|269860859|ref|XP_002650147.1| thymidylate synthase [Enterocytozoon bieneusi H348] gi|220066420|gb|EED43902.1| thymidylate synthase [Enterocytozoon bieneusi H348] Length = 291 Score = 317 bits (814), Expect = 6e-85, Method: Composition-based stats. Identities = 130/284 (45%), Positives = 177/284 (62%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYL+L++ +++ G DRTG GTRS FG Q+RF L FPLLTTK+V KS++ ELL Sbjct: 8 HQYLELIKRILRDGIQCNDRTGTGTRSVFGAQLRFSLRNNQFPLLTTKRVAIKSIIGELL 67 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------ADKDGELGPIYGVQWRSWP------- 102 +F+RG +N L + G+ IWD ++ +LGP+YG QWR + Sbjct: 68 FFIRGQTNNKILKQQGIHIWDGNSTREFFDKVGIQREEDDLGPVYGFQWRHFGAHYKTCH 127 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ+ ++ ++ +P SRR IVSAWN + MALPPCH LFQF V KLSC Sbjct: 128 DDYTGEGVDQLKYVIDEIQKNPESRRIIVSAWNPLCLKDMALPPCHTLFQFRVYGNKLSC 187 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRSGDV LGIPFNIASY+LLT+++A + + EF+HT+GD H+YN+H E + Q++ Sbjct: 188 MLYQRSGDVGLGIPFNIASYALLTIIVAQICNLEPDEFVHTIGDAHIYNDHIEALNKQIT 247 Query: 222 RSPRTLPQMII-NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+P P++ + N F EDF L Y H I+ K+SV Sbjct: 248 RTPFPFPKLKLANKEYRKFEDFEIEDFILEDYNHHPGIIMKMSV 291 >gi|302496437|ref|XP_003010220.1| hypothetical protein ARB_03572 [Arthroderma benhamiae CBS 112371] gi|302655144|ref|XP_003019366.1| hypothetical protein TRV_06595 [Trichophyton verrucosum HKI 0517] gi|291173761|gb|EFE29580.1| hypothetical protein ARB_03572 [Arthroderma benhamiae CBS 112371] gi|291183083|gb|EFE38721.1| hypothetical protein TRV_06595 [Trichophyton verrucosum HKI 0517] Length = 351 Score = 317 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 132/312 (42%), Positives = 172/312 (55%), Gaps = 49/312 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 40 HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159 Query: 97 QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ +V+ L+ PY RR I+SAWN A + KMALPPCH Sbjct: 160 QWRHFGAEYIDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219 Query: 149 LFQFYVD-------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 QFYV G LSC LYQRS D+ LG+PFNIASY+LLT M A Sbjct: 220 FAQFYVSFPPQKTGDEGKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSY 252 G FIHT+GD H+Y +H E QL+R P P + IN ++ ++ DF + Y Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339 Query: 253 EPHAAILAKVSV 264 +PH I K+SV Sbjct: 340 KPHKLIKMKMSV 351 >gi|289466111|gb|ADC94826.1| dihydrofolate reductase-thymidylate synthase [Plasmodium reichenowi] Length = 598 Score = 317 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 123/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 316 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 375 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 376 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 435 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV D+MAL PCH L QFYV +GKLSC Sbjct: 436 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDFDQMALLPCHILCQFYVFDGKLSC 495 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 496 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 555 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 556 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 597 >gi|330919260|ref|XP_003298539.1| hypothetical protein PTT_09291 [Pyrenophora teres f. teres 0-1] gi|311328202|gb|EFQ93363.1| hypothetical protein PTT_09291 [Pyrenophora teres f. teres 0-1] Length = 345 Score = 317 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 131/308 (42%), Positives = 174/308 (56%), Gaps = 45/308 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRST-FGYQMRFDLSK------------GFPLLTTK 48 HQYL L+R++++ G R DRTG GT + F QM+F LS+ PLLTTK Sbjct: 38 HQYLALIRNILENGEHRPDRTGTGTYALPFPPQMKFALSRPSLDPARQDPDLILPLLTTK 97 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++GELGP+YG Sbjct: 98 RVFLRAVIGELLWFVAGSTHSKALSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGF 157 Query: 97 QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ I+ L+ PY RR I+SAWN A I KMALPPCH Sbjct: 158 QWRHFGAEYKGHSHDYTGEGVDQLAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHM 217 Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 QFYV G L LYQRS D+ LG+PFNIASY+LLT MLA V G Sbjct: 218 FAQFYVSFPGHKQGEERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPG 277 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHA 256 F HT+GD H+Y +H E +Q+ R PR P + IN I + ++ E+F + Y+PHA Sbjct: 278 TFTHTMGDAHVYLDHVEALKVQVEREPRDFPTLKINREIGGSIDGWKAEEFEVIGYKPHA 337 Query: 257 AILAKVSV 264 +I K+SV Sbjct: 338 SIAMKMSV 345 >gi|321258400|ref|XP_003193921.1| thymidylate synthase [Cryptococcus gattii WM276] gi|317460391|gb|ADV22134.1| thymidylate synthase [Cryptococcus gattii WM276] Length = 317 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 120/296 (40%), Positives = 165/296 (55%), Gaps = 34/296 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59 +QYLDL++ +I G R DRTG GT + F RF L+ PLLTTK+V + V+ EL Sbjct: 21 YQYLDLIKRIINTGEVRPDRTGTGTVTLFAPPSFRFSLANNTLPLLTTKRVFLRGVIAEL 80 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IWD +K+ G+LGP+YG QWR + Sbjct: 81 LWFVSGCTDAKVLSSQGVGIWDGNGNKEFLEKVGLGHRREGDLGPVYGFQWRHFGAEYTD 140 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 +Y G +DQ+ ++ +++ +P RR I+SAWN + MALPPCH QFYV Sbjct: 141 ADGNYKGKGVDQLQRVIDTIKNNPTDRRIILSAWNPKDLPLMALPPCHMFCQFYVSLPPA 200 Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 KLSC +YQRS D+ LG+PFNIASY+LLT M+A + + EFI +GD H+Y Sbjct: 201 DSPNSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYR 260 Query: 211 NHFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 +H E QL R PR P++ I D+ F+ EDF + Y+P I K+S Sbjct: 261 DHVEPLKTQLEREPREFPKLKWARSKEEIGDIDGFKVEDFEVEGYKPWGKIDMKMS 316 >gi|316933227|ref|YP_004108209.1| thymidylate synthase [Rhodopseudomonas palustris DX-1] gi|315600941|gb|ADU43476.1| thymidylate synthase [Rhodopseudomonas palustris DX-1] Length = 300 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 132/293 (45%), Positives = 173/293 (59%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDLL V+ G +R DRTGVGTR+ FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 8 HQYLDLLAQVLARGDERIDRTGVGTRALFGAMVRFDLSDGTVPILTTKRVYWKTAVKEML 67 Query: 61 WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92 WFL G +N+ L + V IW D +A + G+LGP Sbjct: 68 WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDPISQDEFEKRIVADDAFAARWGDLGP 127 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +VQ+LR +P SRR + AWN + MALPPCH ++Q+ Sbjct: 128 VYGKQWRRWLGADGREHDQIADLVQTLRNNPASRRMLFHAWNPPELGAMALPPCHMVYQY 187 Query: 153 YVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V G+L C LYQRS D+ LG PFN + L +MLA GE I GDVHLY N Sbjct: 188 HVTQGGRLDCLLYQRSCDLLLGAPFNFVGATALQLMLAQQANLTPGELIWVGGDVHLYLN 247 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q++R+PR LP M + + ++ DF + Y+PHAAI A V+V Sbjct: 248 HLDQAREQIARAPRPLPAMRLMRRPDSIDGYKITDFEVEGYDPHAAIKADVAV 300 >gi|2833336|sp|Q27713|DRTS_PLABA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|555825|gb|AAB60237.1| dihydrofolate reductase thymidylate synthase [Plasmodium berghei] Length = 587 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 125/282 (44%), Positives = 180/282 (63%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+ + DRTGVG S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 305 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLNEYFPLLTTKKLFIRGIIEELLW 364 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 365 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 424 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y +DQ+ +I+ ++ DP RR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 425 DNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKNLDQMALPPCHILCQFYVFDGKLSC 484 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH E +QL+ Sbjct: 485 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQAAEFIHVLGNAHVYNNHIESLKIQLN 544 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R+P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 545 RTPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKINMDMA 586 >gi|325095325|gb|EGC48635.1| thymidylate synthase [Ajellomyces capsulatus H88] Length = 369 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 134/323 (41%), Positives = 177/323 (54%), Gaps = 60/323 (18%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46 HQYL L+R +++ G R DRTG GTRS F Q+RF LSK PLLT Sbjct: 47 HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+Y Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166 Query: 95 GVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 G QWR + DY G +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQITEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226 Query: 147 HCLFQFYV----------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 H QFYV G LSCQLYQRS D+ LG+PFNIASY+LL Sbjct: 227 HMFAQFYVSFPAGDRDDGGEEGEEKNKTEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLS 241 T MLA + G IHT+GD H+Y +H E QL+R P P++II + + Sbjct: 287 THMLAHAVDLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMDG 346 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 ++ E+F + Y+PH I K+SV Sbjct: 347 WKEEEFEVVGYKPHKGIKMKMSV 369 >gi|115299508|gb|ABI93724.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] Length = 369 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 128/267 (47%), Positives = 168/267 (62%), Gaps = 21/267 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLD++R ++K G + DRTGVGT S FG MRF+L++ FPLLTTKKV ++ VV ELLW Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGVVEELLW 163 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 FLRGD+N L GV IW+ ++ +LGP+YG QWR + Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY+ +DQ+ ++Q L+ +P SRR I+SAWN + + +MALPPCH + QF+V NGKLSC Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQMALPPCHVMSQFFVANGKLSC 283 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D LGIPFNIASY+LLT MLA GEF+H LGD H+Y+NH + Q+ Sbjct: 284 MMYQRSCDFGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFT 248 R P P + I L + YEDF Sbjct: 344 RVPYPFPILKIKSK-KSLFDYTYEDFE 369 >gi|189210649|ref|XP_001941656.1| bifunctional dihydrofolate reductase-thymidylate synthase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977749|gb|EDU44375.1| bifunctional dihydrofolate reductase-thymidylate synthase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 345 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 131/308 (42%), Positives = 174/308 (56%), Gaps = 45/308 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRST-FGYQMRFDLSK------------GFPLLTTK 48 HQYL L+R++++ G R DRTG GT + F QM+F LS+ PLLTTK Sbjct: 38 HQYLSLIRNILENGEHRPDRTGTGTYALPFPPQMKFALSQPSSDPTRQDPDLILPLLTTK 97 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++GELGP+YG Sbjct: 98 RVFLRAVIGELLWFVAGSTHSKALSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGF 157 Query: 97 QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ I+ L+ PY RR I+SAWN A I KMALPPCH Sbjct: 158 QWRHFGAEYKGHSHDYTGEGVDQLAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHM 217 Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 QFYV G L LYQRS D+ LG+PFNIASY+LLT MLA V G Sbjct: 218 FAQFYVSFPGHKQGEERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPG 277 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHA 256 F HT+GD H+Y +H E +Q+ R PR P + IN I + ++ E+F + Y+PHA Sbjct: 278 TFTHTMGDAHVYLDHVEALKVQVEREPRDFPTLKINREIGGSIDGWKAEEFEVIGYKPHA 337 Query: 257 AILAKVSV 264 +I K+SV Sbjct: 338 SIAMKMSV 345 >gi|46108362|ref|XP_381239.1| hypothetical protein FG01063.1 [Gibberella zeae PH-1] Length = 325 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 123/302 (40%), Positives = 172/302 (56%), Gaps = 39/302 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R +++ G R DRTG GT S F ++F L+ PLLTTK+V ++V+ Sbjct: 24 NQYLDLVREILETGERRPDRTGTGTFSIFAPRPLKFALNNNGTPILPLLTTKRVFTRAVI 83 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102 ELLWF+ G+++ L G+ IWD ++ G+LGP+YG QWR + Sbjct: 84 AELLWFIEGNTSSKSLSEAGIKIWDGNGSREFLDNLGLQHREVGDLGPVYGFQWRHFGAE 143 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQ++ I+ LR +PY RR ++SAWN A + KM LPPCH QFYV Sbjct: 144 YVDAKTDYTGQGVDQLAEIIHKLRTNPYDRRLVLSAWNPADMKKMVLPPCHMFAQFYVSY 203 Query: 156 ------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 G L CQLYQRS D+ LG+PFNIASY+LLT M+A V G H + Sbjct: 204 PRSKDENSEEKPQGHLHCQLYQRSCDMGLGVPFNIASYALLTHMMAHVCELVPGSLTHVM 263 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKV 262 GD H+Y +H + +QL R PR P++ I + ++ +DFT++ Y+PH I K+ Sbjct: 264 GDAHVYLDHVDALKVQLEREPRNFPELEIAREKGGSIDGWKADDFTVKGYDPHKTIAMKM 323 Query: 263 SV 264 SV Sbjct: 324 SV 325 >gi|166164575|gb|ABY83786.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 124/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622 >gi|166164577|gb|ABY83787.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 124/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622 >gi|166164573|gb|ABY83785.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 124/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622 >gi|166164565|gb|ABY83781.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 124/275 (45%), Positives = 175/275 (63%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVGGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622 >gi|166164569|gb|ABY83783.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 124/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVREIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622 >gi|315039927|ref|XP_003169341.1| thymidylate synthase [Arthroderma gypseum CBS 118893] gi|311346031|gb|EFR05234.1| thymidylate synthase [Arthroderma gypseum CBS 118893] Length = 345 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 132/310 (42%), Positives = 172/310 (55%), Gaps = 47/310 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 36 HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 95 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Sbjct: 96 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 155 Query: 97 QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ +V+ L+ PY RR I+SAWN A + KMALPPCH Sbjct: 156 QWRHFGAEYVDAKTDYAGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 215 Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 QFYV G LSC LYQRS D+ LG+PFNIASY+LLT M A G Sbjct: 216 FAQFYVSFPPQKEGDERGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPG 275 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSYEP 254 FIHT+GD H+Y +H E QL+R P P + IN ++ ++ DF + Y+P Sbjct: 276 TFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDQGSGEMDGWKDSDFEVLDYKP 335 Query: 255 HAAILAKVSV 264 H I K+SV Sbjct: 336 HKLIKMKMSV 345 >gi|166164571|gb|ABY83784.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 123/275 (44%), Positives = 175/275 (63%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ WNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCTWNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622 >gi|327298179|ref|XP_003233783.1| thymidylate synthase [Trichophyton rubrum CBS 118892] gi|326463961|gb|EGD89414.1| thymidylate synthase [Trichophyton rubrum CBS 118892] Length = 351 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 132/312 (42%), Positives = 172/312 (55%), Gaps = 49/312 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 40 HQYLNLIRTIIGTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEGGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159 Query: 97 QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ +V+ L+ PY RR I+SAWN A + KMALPPCH Sbjct: 160 QWRHFGAEYIDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219 Query: 149 LFQFYVD-------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 QFYV G LSC LYQRS D+ LG+PFNIASY+LLT M A Sbjct: 220 FAQFYVSFPLQKAGDEGKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSY 252 G FIHT+GD H+Y +H E QL+R P P + IN ++ ++ DF + Y Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339 Query: 253 EPHAAILAKVSV 264 +PH I K+SV Sbjct: 340 KPHKLIKMKMSV 351 >gi|166164563|gb|ABY83780.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 620 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 125/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 620 >gi|304373440|ref|YP_003856649.1| Thymidylate synthase 2 [Mycoplasma hyorhinis HUB-1] gi|304309631|gb|ADM22111.1| Thymidylate synthase 2 [Mycoplasma hyorhinis HUB-1] Length = 286 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 140/293 (47%), Positives = 187/293 (63%), Gaps = 36/293 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+ LRH+++ G + +RT V + +TFGYQMRFDLS+GFPL+TTKK ++ S+ HELL Sbjct: 1 MRQYLEFLRHILQKGIKKTNRTIVDSINTFGYQMRFDLSEGFPLVTTKKTNFASIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91 WF++GD+N+ YL + V+IW+EW ++ GELG Sbjct: 61 WFIKGDTNIKYLVDNNVNIWNEWPYENYKKSKEFQGESLKEFIVKIKENPSFAKQFGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ +DQ+ ++Q ++ +P SRR IVSAWN ID M LPPCH LFQ Sbjct: 121 PVYGKQWRNFL-----GVDQLKKVIQEIKTNPNSRRLIVSAWNPLEIDSMLLPPCHSLFQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV N KLSCQLYQRS D FLG+PFNIASYSLL M+A + GEFIHT+GD H+Y N Sbjct: 176 FYVANNKLSCQLYQRSADAFLGVPFNIASYSLLVFMIAQECELEVGEFIHTIGDAHIYVN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +Q +LQL+R P LP++ I ++ED L YE + I +V+V Sbjct: 236 HIDQVNLQLTRIPHKLPKLKITKKP--FFDIQFEDLQLIDYEHDSFIKGEVAV 286 >gi|30749344|pdb|1J3I|C Chain C, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump gi|30749345|pdb|1J3I|D Chain D, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump gi|30749348|pdb|1J3J|C Chain C, Double Mutant (C59r+s108n) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Pyrimethamine, Nadph, And Dump gi|30749349|pdb|1J3J|D Chain D, Double Mutant (C59r+s108n) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Pyrimethamine, Nadph, And Dump gi|30749352|pdb|1J3K|C Chain C, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump gi|30749353|pdb|1J3K|D Chain D, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump gi|222143068|pdb|3DG8|C Chain C, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Rjf670, Nadph, And Dump gi|222143069|pdb|3DG8|D Chain D, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Rjf670, Nadph, And Dump gi|222143072|pdb|3DGA|C Chain C, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Rjf01302, Nadph, And Dump gi|222143073|pdb|3DGA|D Chain D, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Rjf01302, Nadph, And Dump Length = 328 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ ++ G+ + DRTGVG S FGY M+FDLS+ FPLLTTKK+ + ++ ELLW Sbjct: 46 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 105 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 106 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 165 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ +DQ+ +I+ ++ DP SRR ++ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 166 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 225 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T M+A V Q +FIH LG+ H+YNNH + +QL+ Sbjct: 226 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 285 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 286 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 327 >gi|242772690|ref|XP_002478088.1| thymidylate synthase [Talaromyces stipitatus ATCC 10500] gi|218721707|gb|EED21125.1| thymidylate synthase [Talaromyces stipitatus ATCC 10500] Length = 312 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 123/305 (40%), Positives = 167/305 (54%), Gaps = 42/305 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R + G R DRTG GT S F +F L+ PLLTTK+V ++V+ Sbjct: 8 NQYLDLIRDIFDHGEQRPDRTGTGTLSIFAPRPFKFKLNDNGRPILPLLTTKRVFLRAVI 67 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102 ELLWF+ G+++ L+ GV IWD ++ G+LGP+YG QWR + Sbjct: 68 AELLWFIEGNTSSIALNEVGVKIWDGNGSREFLDNLGLTHREVGDLGPVYGFQWRHFGAG 127 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY G +DQI+ I+ LR +PY RR I++AWN + M LPPCH QFYV Sbjct: 128 YIDAKADYTGQGVDQIADIIHKLRTNPYDRRMILTAWNPKDLRLMVLPPCHMFAQFYVSF 187 Query: 156 ---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 G L CQLYQRS D+ LG+PFNIASY+LLT MLA G Sbjct: 188 PGQGLAKNGTTENKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHACDLVPGSLT 247 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMII-NPNIVDLLSFRYEDFTLRSYEPHAAIL 259 H +GD H+Y +H + +QL R PR P++ I + + ++ EDF ++ Y+PH AI Sbjct: 248 HVMGDAHVYLDHVDALKVQLEREPRPFPELEITHEKGGSIDGWKAEDFVVKGYDPHKAIA 307 Query: 260 AKVSV 264 +SV Sbjct: 308 MNMSV 312 >gi|4249575|dbj|BAA74947.1| thymidylate synthase [Oryza sativa] Length = 322 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 130/317 (41%), Positives = 173/317 (54%), Gaps = 54/317 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + ++ G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV + + ELLW Sbjct: 6 QQYLDLAQKILAEGNLKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVFFGLIKSELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 FLRGD+N+ +L +H IWDEW Sbjct: 66 FLRGDNNIRFLLQHNNHIWDEWAFKNWVESNDYTGPDMTNFGHRAETDPEFAAVYQTQKA 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127 +K G +G +YG WR W ++ +V+ ++ P SRR Sbjct: 126 IFVDKILNDDAFMEKFGYVGDVYGKLWRGWETSSVTAGAETVESSCGLVEEIKTTPDSRR 185 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I++AWN + LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL M Sbjct: 186 LILTAWNADTTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHM 245 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247 +A+ G++ G+F+HT+GD H+YNNH Q QLSR LP++ +NP++ + + D Sbjct: 246 MAAQTGYEVGDFVHTIGDTHIYNNHVAQITEQLSRPMHPLPKLWLNPDVKSIFDYTMADI 305 Query: 248 TLRSYEPHAAILAKVSV 264 + YE A I A V+V Sbjct: 306 KVLDYESEAPIKAPVAV 322 >gi|166164559|gb|ABY83778.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 620 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 125/275 (45%), Positives = 175/275 (63%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 466 DNYDNKGIDQLKNIINLIKNGPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 620 >gi|166164555|gb|ABY83776.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 620 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 125/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 620 >gi|114672495|ref|XP_001150304.1| PREDICTED: thymidylate synthase isoform 2 [Pan troglodytes] Length = 279 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 120/274 (43%), Positives = 156/274 (56%), Gaps = 38/274 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL + H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY----- 146 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 R + + MALPPCH L QFYV N +LSCQLYQRSGD+ Sbjct: 147 ---------------RDME------SDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R PR P++ Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I + + F+ EDF + Y PH I +++V Sbjct: 246 KILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 279 >gi|146276896|ref|YP_001167055.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17025] gi|172046015|sp|A4WQT6|TYSY_RHOS5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145555137|gb|ABP69750.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17025] Length = 298 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 129/293 (44%), Positives = 172/293 (58%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 YLDLL V+ G R DRTGVGT S FG +RFDLSKG P+LTTKKV+WK+ V E+L Sbjct: 6 QHYLDLLAQVLARGDRRVDRTGVGTLSLFGAMLRFDLSKGAAPILTTKKVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL G +N+ L + V IW +W + G+LGP Sbjct: 66 WFLTGGTNIRPLLQQNVRIWTDWPLAAYRRATGEEIGQAEFEARIVADEGFAARWGDLGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ ++++LR +P SRR + AWNVA + +MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWLGPDGREHDQIAGLIETLRTNPASRRMLFHAWNVAEVGQMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS D+ LG PFN + L +M+A GE + GD HLY N Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQADLLPGELVWVGGDTHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQA Q+SR+PR P+M + + +R EDF + YE H AI A+V+V Sbjct: 246 HLEQAREQISRAPRDWPRMQLVRRAESIDDYRIEDFAVEGYESHPAIAAEVAV 298 >gi|85690907|ref|XP_965853.1| thymidylate synthase [Encephalitozoon cuniculi GB-M1] gi|85691163|ref|XP_965981.1| thymidylate synthase [Encephalitozoon cuniculi GB-M1] gi|51704239|sp|O62584|TYS1_ENCCU RecName: Full=Thymidylate synthase 1/2; Short=TS 1/2; Short=TSase 1/2 gi|266618852|pdb|3KGB|A Chain A, Crystal Structure Of Thymidylate Synthase 12 FROM Encephalitozoon Cuniculi At 2.2 A Resolution gi|19068420|emb|CAD24888.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1] gi|19068548|emb|CAD25016.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1] Length = 294 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 137/284 (48%), Positives = 188/284 (66%), Gaps = 22/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDL++H+++ G+ R DRTG GT S FG MRF L FPLLTT++V ++ VV ELL Sbjct: 10 HQYLDLVKHILENGARRMDRTGTGTLSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------ADKDGELGPIYGVQWRSWP------- 102 +FLRG+++ L + GV IW++ ++G+LGPIYG QWR + Sbjct: 70 FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 Y+G +DQI+S + ++RA+P SRR +VSAWN + MALPPCH LFQF V +GKLSC Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H + Q+ Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQIQ 249 Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R PR P++ ++P + F+YEDF L Y+PH AI +S Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMS 293 >gi|18150851|dbj|BAB83677.1| thymidylate synthase [Homo sapiens] gi|119622121|gb|EAX01716.1| thymidylate synthetase, isoform CRA_a [Homo sapiens] Length = 279 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 120/274 (43%), Positives = 157/274 (57%), Gaps = 38/274 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY----- 146 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 R + + MALPPCH L QFYV N +LSCQLYQRSGD+ Sbjct: 147 ---------------RDME------SDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDM 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R PR P++ Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 I + + F+ EDF + Y PH I +++V Sbjct: 246 RILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 279 >gi|19173335|ref|NP_597138.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1] gi|51702027|sp|Q8SRG2|TYS3_ENCCU RecName: Full=Thymidylate synthase 3; Short=TS 3; Short=TSase 3 gi|19170924|emb|CAD26314.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1] Length = 294 Score = 314 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 137/284 (48%), Positives = 188/284 (66%), Gaps = 22/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDL++H+++ G+ R DRTG GT S FG MRF L FPLLTT++V ++ VV ELL Sbjct: 10 HQYLDLVKHILENGARRMDRTGTGTLSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------ADKDGELGPIYGVQWRSWP------- 102 +FLRG+++ L + GV IW++ ++G+LGPIYG QWR + Sbjct: 70 FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 Y+G +DQI+S + ++RA+P SRR +VSAWN + MALPPCH LFQF V +GKLSC Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H + Q+ Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQVQ 249 Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R PR P++ ++P + F+YEDF L Y+PH AI +S Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMS 293 >gi|296125219|ref|YP_003632471.1| thymidylate synthase [Brachyspira murdochii DSM 12563] gi|296017035|gb|ADG70272.1| thymidylate synthase [Brachyspira murdochii DSM 12563] Length = 266 Score = 314 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 137/266 (51%), Positives = 178/266 (66%), Gaps = 2/266 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 M YL+LL+ V++ G + DRTGVGTR F Q+RF P++TTK+V K V+ EL Sbjct: 1 MKNYLELLKKVLEEGEETLDRTGVGTRRIFAPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 LWFL+G +N+ +L + V IWDEWAD GELGP+YG QWR+W +GN IDQIS+IV +L Sbjct: 61 LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNIVNTL 120 Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNI 178 R +P SRR+I++AWNV IDKM LPPCH + QF V+N G + LYQRS D+FLG+PFNI Sbjct: 121 RNNPTSRRNILNAWNVGEIDKMHLPPCHMMCQFSVNNKGGIIAHLYQRSADLFLGVPFNI 180 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 +SY++LT +LA G E I T GD H+YNNH EQ LQLSR P + N + Sbjct: 181 SSYAILTRLLAMHSGLHASELIMTFGDAHIYNNHIEQVKLQLSREPYENTTELFIENRPN 240 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + S YEDF L Y+ + I +V+V Sbjct: 241 IFSHVYEDFRLEGYKYYPTIKGEVAV 266 >gi|328862602|gb|EGG11703.1| hypothetical protein MELLADRAFT_51590 [Melampsora larici-populina 98AG31] Length = 302 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 130/292 (44%), Positives = 172/292 (58%), Gaps = 29/292 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKGF-PLLTTKKVHWKSVVHEL 59 HQYLDL+R VI G R DRTG GTRS F Q+RF L+ PLLTTKKV K+++HEL Sbjct: 11 HQYLDLVRRVIDQGQHRPDRTGTGTRSLFAPPQLRFTLTDSTLPLLTTKKVFTKAIIHEL 70 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP----- 102 LWF++G ++ L GV+IW+ K +G+LGPIYG QWR + Sbjct: 71 LWFIKGSTSSLDLSSKGVNIWNGNGSKKYLESIGLDQRSEGDLGPIYGFQWRHFGARYKT 130 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY IDQ+ ++ ++++P RR I++AWN + + KMALPPCH QFYV Sbjct: 131 FQDDYTDQGIDQLKECIEKIKSNPTDRRIILTAWNPSDLSKMALPPCHMFCQFYVTLADD 190 Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 +LSC LYQRS D+ LG+PFNIASY+LL M++ V + E I LGD HLYN+H Sbjct: 191 QNPKPRLSCILYQRSADIGLGLPFNIASYALLVHMISQVTSTEPYELIIQLGDAHLYNDH 250 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R PR P++ + + D+ F YEDF + Y+PH I +SV Sbjct: 251 LGPIQTQLDRQPRPFPKIKLREQVHDIDGFVYEDFQISEYDPHPKIEMAMSV 302 >gi|170116608|ref|XP_001889494.1| predicted protein [Laccaria bicolor S238N-H82] gi|164635496|gb|EDQ99802.1| predicted protein [Laccaria bicolor S238N-H82] Length = 308 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 127/295 (43%), Positives = 168/295 (56%), Gaps = 32/295 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59 QYL L+R V+ G R DRTG GT + F +RF L+ PLLTTK+ + +V EL Sbjct: 14 QQYLQLIRRVLDAGDIRPDRTGTGTIAIFAPPSLRFSLADSTLPLLTTKRTFMRGIVEEL 73 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP----- 102 LWF+ G ++ + L + GV IWD K +G+LGP+YG QWR + Sbjct: 74 LWFVHGSTDSTILSKKGVKIWDGNGSKAFLEGRGLGHRREGDLGPVYGFQWRHFGAEYVD 133 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ+ ++ ++ +P RR I+SAWN I +MALPPCH L QFYV Sbjct: 134 CDKDYTGQGVDQLRECIKKIKENPTDRRIILSAWNPKDIPQMALPPCHMLCQFYVHLPPA 193 Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 KLSC +YQRS D+ LGIPFNIASY+LLT M+A V G E I LGD H+Y Sbjct: 194 SDPTQKPKLSCLMYQRSADLGLGIPFNIASYALLTHMIAHVTGTTAHELIIQLGDAHVYR 253 Query: 211 NHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + + QL R PR P++ NI D+ F Y DF + YEPH +I K+S+ Sbjct: 254 DHVDALEEQLKREPRPFPKLRWARDNIDDIEDFVYSDFVVEGYEPHPSIAMKMSI 308 >gi|261192532|ref|XP_002622673.1| thymidylate synthase [Ajellomyces dermatitidis SLH14081] gi|239589548|gb|EEQ72191.1| thymidylate synthase [Ajellomyces dermatitidis SLH14081] gi|239615262|gb|EEQ92249.1| thymidylate synthase [Ajellomyces dermatitidis ER-3] gi|327353622|gb|EGE82479.1| thymidylate synthase [Ajellomyces dermatitidis ATCC 18188] Length = 363 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 133/316 (42%), Positives = 177/316 (56%), Gaps = 53/316 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK--------------GFPLLT 46 HQYL+L+R +++ G R DRTG GTRS F Q+RF LSK PLLT Sbjct: 48 HQYLNLIRSILEAGEYRPDRTGTGTRSLFAPPQLRFSLSKPNTSNSASTSSRTPILPLLT 107 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+Y Sbjct: 108 TKRVFLRAVLAELLWFISGCTSSLPLSEAGIKIWDGNGSREYLDSVGLSHRPVGDLGPVY 167 Query: 95 GVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 G QWR + DY G +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC Sbjct: 168 GFQWRHFGAEYIDAQTDYAGQGVDQIAEVVRKLKDNPYDRRIILSAWNPADLKKMALPPC 227 Query: 147 HCLFQFYV---------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 H QFYV G LSCQLYQRS D+ LG+PFNIASY+LLT MLA Sbjct: 228 HMFAQFYVSFPPGDHGHDGRGEKRKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHA 287 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFT 248 G IHT+GD H+Y +H E QL+R P P++II + + ++ E+F Sbjct: 288 ADLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGVMDGWKEEEFE 347 Query: 249 LRSYEPHAAILAKVSV 264 + Y+PH I K+SV Sbjct: 348 VVGYKPHKGIKMKMSV 363 >gi|332558834|ref|ZP_08413156.1| thymidylate synthase [Rhodobacter sphaeroides WS8N] gi|332276546|gb|EGJ21861.1| thymidylate synthase [Rhodobacter sphaeroides WS8N] Length = 298 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 126/293 (43%), Positives = 173/293 (59%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDLL ++ G R DRTGVGT S FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 6 QQYLDLLTQTLERGDRRVDRTGVGTLSLFGAMLRFDLSDGQVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL G +N+ L + V IW +W + GELGP Sbjct: 66 WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEQISQAAFEQRILEDEAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI++++++LR +P SRR + AWNVA + +MALPPCH ++Q+ Sbjct: 126 VYGRQWRRWLGPDGREHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS D+ LG PFN + L +M+A G G+ + GD HLY N Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWMGGDTHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q R+PR P+M + + +R EDF + Y+PH AI A+V+V Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298 >gi|166164557|gb|ABY83777.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 620 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 125/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREANDLGPIYGFQWRHFGAEYTNMY 465 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLT 585 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 586 RIPYPFPTLKLNPEIKNVEDFTISDFTIENYVHHD 620 >gi|77463962|ref|YP_353466.1| thymidylate synthase [Rhodobacter sphaeroides 2.4.1] gi|123591492|sp|Q3J0W9|TYSY_RHOS4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|77388380|gb|ABA79565.1| thymidylate synthase [Rhodobacter sphaeroides 2.4.1] Length = 298 Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats. Identities = 126/293 (43%), Positives = 174/293 (59%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDLL ++ G R DRTGVGT S FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 6 QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSGGQVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL G +N+ L + V IW +W + GELGP Sbjct: 66 WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEEISQAAFEQRVLEDEAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG+ DQI++++++LR +P SRR + AWNVA + +MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWLGPDGHEHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS D+ LG PFN + L +M+A G G+ + GD HLY N Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q R+PR P+M + + +R EDF + Y+PH AI A+V+V Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298 >gi|225556281|gb|EEH04570.1| thymidylate synthase [Ajellomyces capsulatus G186AR] Length = 369 Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats. Identities = 133/323 (41%), Positives = 175/323 (54%), Gaps = 60/323 (18%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46 HQYL L+R +++ G R DRTG GTRS F Q+RF LSK PLLT Sbjct: 47 HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+Y Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166 Query: 95 GVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 G QWR + DY G +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226 Query: 147 HCLFQFYVDNG----------------------KLSCQLYQRSGDVFLGIPFNIASYSLL 184 H QFYV LSCQLYQRS D+ LG+PFNIASY+LL Sbjct: 227 HMFAQFYVSFPAGDRDDGGEEGEEKNEKEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLS 241 T MLA G IHT+GD H+Y +H E QL+R P P++II + + Sbjct: 287 THMLAHAADLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMDG 346 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 ++ E+F + Y+PH I K+SV Sbjct: 347 WKEEEFEVVGYKPHKGIKMKMSV 369 >gi|58260182|ref|XP_567501.1| thymidylate synthase [Cryptococcus neoformans var. neoformans JEC21] gi|134116550|ref|XP_772947.1| hypothetical protein CNBJ2230 [Cryptococcus neoformans var. neoformans B-3501A] gi|1174839|sp|P45351|TYSY_CRYNE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|83753957|pdb|2AAZ|A Chain A, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753958|pdb|2AAZ|B Chain B, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753959|pdb|2AAZ|C Chain C, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753960|pdb|2AAZ|D Chain D, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753961|pdb|2AAZ|E Chain E, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753962|pdb|2AAZ|F Chain F, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753963|pdb|2AAZ|G Chain G, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753964|pdb|2AAZ|H Chain H, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753965|pdb|2AAZ|I Chain I, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753966|pdb|2AAZ|J Chain J, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753967|pdb|2AAZ|K Chain K, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753968|pdb|2AAZ|L Chain L, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753969|pdb|2AAZ|M Chain M, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753970|pdb|2AAZ|N Chain N, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753971|pdb|2AAZ|O Chain O, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|83753972|pdb|2AAZ|P Chain P, Cryptococcus Neoformans Thymidylate Synthase Complexed With Substrate And An Antifolate gi|602128|gb|AAC48931.1| thymidylate synthase [Cryptococcus neoformans var. neoformans] gi|50255567|gb|EAL18300.1| hypothetical protein CNBJ2230 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229551|gb|AAW45984.1| thymidylate synthase [Cryptococcus neoformans var. neoformans JEC21] Length = 317 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 121/296 (40%), Positives = 164/296 (55%), Gaps = 34/296 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59 +QYLDL+R +I G R DRTG GT + F RF L+ PLLTTK+V + V+ EL Sbjct: 21 YQYLDLIRRIINVGEVRPDRTGTGTVALFAPPSFRFSLADNTLPLLTTKRVFLRGVIAEL 80 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ G ++ L GV IWD K+ G+LGP+YG QWR + Sbjct: 81 LWFVSGCTDAKMLSSQGVGIWDGNGSKEFLEKVGLGHRREGDLGPVYGFQWRHFGAEYTD 140 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ+ ++ +++ +P RR I+SAWN + MALPPCH QF+V Sbjct: 141 ADGDYKGKGVDQLQRVIDTIKNNPTDRRIILSAWNPKDLPLMALPPCHMFCQFFVSLPPA 200 Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 KLSC +YQRS D+ LG+PFNIASY+LLT M+A + + EFI +GD H+Y Sbjct: 201 DSPGSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYR 260 Query: 211 NHFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 +H E QL R PR P++ I D+ F+ EDF + Y+P I K+S Sbjct: 261 DHVEPLKTQLEREPRDFPKLKWARSKEEIGDIDGFKVEDFVVEGYKPWGKIDMKMS 316 >gi|148556688|ref|YP_001264270.1| thymidylate synthase [Sphingomonas wittichii RW1] gi|172048261|sp|A5VCW6|TYSY_SPHWW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148501878|gb|ABQ70132.1| thymidylate synthase [Sphingomonas wittichii RW1] Length = 308 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 124/302 (41%), Positives = 167/302 (55%), Gaps = 39/302 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLD + G +R DRTGVGT+S FG MRFDLS G PL+TTKK+ WKS + EL+ Sbjct: 7 QQYLDAMARAWYGGDERVDRTGVGTKSLFGVTMRFDLSDGTVPLITTKKIFWKSAIKELI 66 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL GD+N+ L V IW +W + G+LGP Sbjct: 67 WFLSGDTNIRPLVMQNVHIWTDWPLDKYRKATGEAIDRDAFERRIVDDPAFAAEWGDLGP 126 Query: 93 IYGVQWRSWPDY----------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 +YG QW WP Y + ++QI+ +V LRA+P SRR I + WNV + MA Sbjct: 127 VYGKQWVDWPRYTPAGDGLFRREEKGVNQIAELVGMLRANPSSRRLIFTGWNVPELPGMA 186 Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 LPPCH +Q++V G+LS LYQRS D+ LG PFNI ++L MLA + GE + Sbjct: 187 LPPCHMTYQYHVAGGRLSGILYQRSCDLGLGFPFNIFEAAVLIRMLAQQADLEPGELVWM 246 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 D H+Y+NH + QLSRSPR P++ + D+ S+ +DF + Y+PH I A+V Sbjct: 247 GADTHVYSNHGHLVEEQLSRSPRPFPRLSLARKPADMFSYALDDFVIEGYDPHPHIKAEV 306 Query: 263 SV 264 +V Sbjct: 307 AV 308 >gi|12230765|sp|Q9P4T7|TYSY_AGABI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|8918939|emb|CAB96042.1| thymidylate synthase [Agaricus bisporus] Length = 296 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 126/291 (43%), Positives = 164/291 (56%), Gaps = 29/291 (9%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL L+R V+ G R DRTG GT S F +RF L + PLLTTK+ + +V ELL Sbjct: 6 QYLHLIRRVLDTGDLRPDRTGTGTISLFAPPNLRFSLRESTVPLLTTKRTFLRGIVEELL 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102 WF G ++ L GV IWD K +G+LGP+YG QWR + Sbjct: 66 WFTNGLTDSKILSDKGVKIWDGNGSKAFLESRGLGHRREGDLGPVYGFQWRHFGAEYEDC 125 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------ 154 DY G +DQ+ ++ ++ +P RR I+SAWN I MALPPCH L QFYV Sbjct: 126 DADYAGKGVDQLRECIRKIKENPTDRRIILSAWNPKDIPSMALPPCHMLCQFYVHLPADT 185 Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 +LSC ++QRS D+ LGIPFNIASY+LLT M+A V G E I LGD H+Y +H E Sbjct: 186 AKPELSCLMFQRSADLGLGIPFNIASYALLTHMIAHVTGTTARELIIQLGDAHVYRDHVE 245 Query: 215 QADLQLSRSPRTLPQMIINPN-IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++QL R PR P++ + I D+ F Y DF + Y PH +I K+SV Sbjct: 246 ALEVQLQREPRPFPKLRWARDGITDIEDFEYSDFVIEGYNPHPSIAMKMSV 296 >gi|166164561|gb|ABY83779.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 620 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 124/275 (45%), Positives = 175/275 (63%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+ G++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 406 FIGGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +YD IDQ+ +I+ ++ +P SRR I+ AWNV +DKMALPPCH L QFY+ +GKLSC Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 620 >gi|221639818|ref|YP_002526080.1| Thymidylate synthase [Rhodobacter sphaeroides KD131] gi|221160599|gb|ACM01579.1| Thymidylate synthase [Rhodobacter sphaeroides KD131] Length = 298 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 126/293 (43%), Positives = 174/293 (59%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDLL ++ G R DRTGVGT S FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 6 QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSGGQVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL G +N+ L + V IW +W + GELGP Sbjct: 66 WFLAGGTNIRPLLQENVRIWSDWPLAAYRRESGEQISQAAFEQRILEDEAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG+ DQI++++++LR +P SRR + AWNVA + +MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWLGPDGHEHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS D+ LG PFN + L +M+A G G+ + GD HLY N Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q R+PR P+M + + +R EDF + Y+PH AI A+V+V Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298 >gi|295657856|ref|XP_002789493.1| thymidylate synthase [Paracoccidioides brasiliensis Pb01] gi|226283762|gb|EEH39328.1| thymidylate synthase [Paracoccidioides brasiliensis Pb01] Length = 360 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 132/313 (42%), Positives = 176/313 (56%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49 HQYL+L+R ++ G +R DRTG GTRS F Q+RF LSK PLLTTK+ Sbjct: 48 HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGFSSPSSRTPILPLLTTKR 107 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Q Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSEAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH Sbjct: 168 WRYFGAEYIDAQTDYTGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227 Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 QFYV G LSCQLYQRS D+ LG+PFNIASY+LLT MLA Sbjct: 228 AQFYVSFPSHGGNSEGGYEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRS 251 G IHT+GD H+Y +H E QL R P P+++I + + ++ E+F + Sbjct: 288 YPGTLIHTMGDAHVYLDHIEALQEQLKREPVDFPELVIKRDDRGSGVMDGWKEEEFEVVG 347 Query: 252 YEPHAAILAKVSV 264 Y+PH I K+S+ Sbjct: 348 YKPHKGIKMKMSI 360 >gi|115299504|gb|ABI93722.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] Length = 369 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 127/267 (47%), Positives = 168/267 (62%), Gaps = 21/267 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLD++R ++K G + DRTGVGT S FG MRF+L++ FPLLTTKKV ++ V ELLW Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGAVEELLW 163 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 FLRGD+N L GV IW+ ++ +LGP+YG QWR + Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY+ +DQ+ ++Q L+ +P SRR I+SAWN + +++MALPPCH + QF+V NGKLSC Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLEQMALPPCHVMSQFFVANGKLSC 283 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LGIPFNIASY+LLT MLA GEF+H LGD H+Y+NH + Q+ Sbjct: 284 MMYQRSCDLGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFT 248 R P P + I L YEDF Sbjct: 344 RVPYPFPILKIKSQ-KSLFDHTYEDFE 369 >gi|115524163|ref|YP_781074.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] gi|115518110|gb|ABJ06094.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] Length = 300 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 135/293 (46%), Positives = 176/293 (60%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDLL V++ G R DRTGVGTR+ FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 8 HQYLDLLAQVLEKGDQRIDRTGVGTRALFGAMIRFDLSDGRVPILTTKRVYWKTAVKEML 67 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL G +N+ L + V IW +W + G+LGP Sbjct: 68 WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDSISQEDFEKRVVEDNAFATRWGDLGP 127 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +VQ+L+++P SRR + AWN + MALPPCH ++Q+ Sbjct: 128 VYGKQWRRWLGADGREYDQIAELVQTLKSNPASRRMLFHAWNPPELGAMALPPCHMVYQY 187 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +GKL+C LYQRS D+ LG FN A+ S L +MLA GEFI GDVHLY N Sbjct: 188 HVTSSGKLNCILYQRSCDLLLGAAFNYAAASALQLMLAQQADLTPGEFIWFGGDVHLYLN 247 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q+SR+PR P M + + +R DF + YEPHAAI A V+V Sbjct: 248 HLDQAREQISRAPRPFPTMRLTRRPDSIDGYRISDFEVDGYEPHAAIKADVAV 300 >gi|116204425|ref|XP_001228023.1| hypothetical protein CHGG_10096 [Chaetomium globosum CBS 148.51] gi|88176224|gb|EAQ83692.1| hypothetical protein CHGG_10096 [Chaetomium globosum CBS 148.51] Length = 348 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 127/325 (39%), Positives = 171/325 (52%), Gaps = 62/325 (19%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R ++ G R DRTG GT S F ++F L++ PLLTTK+V K+V+ Sbjct: 24 YQYLDLVREILDEGELRSDRTGTGTYSIFAPRPLKFSLNRDGVPILPLLTTKRVFTKAVI 83 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102 ELLWF+ GD++ L GV IWD ++ G+LGP+YG QWR + Sbjct: 84 AELLWFISGDTSSHTLSSQGVKIWDGNGSREFLDKLGLTSRAEGDLGPVYGFQWRHFGAQ 143 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154 DY G +DQ++ IV +LR +P+ RR ++SAWN A + M LPPCH QFYV Sbjct: 144 YVDSATDYTGKGVDQLARIVHTLRTNPFDRRLVLSAWNPADMPSMVLPPCHMFAQFYVSY 203 Query: 155 ---------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 G L+CQLYQRS D+ LG+PFNIASY+LLT M Sbjct: 204 PGGARRSHTTTTTTTNPEQTPTPPPAKSKGHLNCQLYQRSCDMGLGVPFNIASYALLTHM 263 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV--------DL 239 LA V G H +GD H+Y NH E QL R PR P++ I+ + Sbjct: 264 LAHVCDLVPGSLTHVMGDAHVYLNHVEALQTQLEREPRPFPELEISEERQGRGPAEERSI 323 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 ++ EDF ++ Y PH I ++SV Sbjct: 324 DGWKAEDFLIKGYNPHKIIPMEMSV 348 >gi|332225955|ref|XP_003262153.1| PREDICTED: thymidylate synthase-like [Nomascus leucogenys] Length = 251 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 115/246 (46%), Positives = 153/246 (62%), Gaps = 20/246 (8%) Query: 39 SKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD----------- 87 S FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D Sbjct: 6 SDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTRE 65 Query: 88 -GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 G+LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN + Sbjct: 66 EGDLGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDL 125 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+ Sbjct: 126 PLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGD 185 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 FIHTLGD H+Y NH E +QL R PR P++ I + + F+ EDF + Y PH I Sbjct: 186 FIHTLGDAHVYLNHIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTI 245 Query: 259 LAKVSV 264 +++V Sbjct: 246 KMEMAV 251 >gi|224471863|sp|Q07PP0|TYSY_RHOP5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 298 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 135/293 (46%), Positives = 176/293 (60%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDLL V++ G R DRTGVGTR+ FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 6 HQYLDLLAQVLEKGDQRIDRTGVGTRALFGAMIRFDLSDGRVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL G +N+ L + V IW +W + G+LGP Sbjct: 66 WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDSISQEDFEKRVVEDNAFATRWGDLGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +VQ+L+++P SRR + AWN + MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWLGADGREYDQIAELVQTLKSNPASRRMLFHAWNPPELGAMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +GKL+C LYQRS D+ LG FN A+ S L +MLA GEFI GDVHLY N Sbjct: 186 HVTSSGKLNCILYQRSCDLLLGAAFNYAAASALQLMLAQQADLTPGEFIWFGGDVHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q+SR+PR P M + + +R DF + YEPHAAI A V+V Sbjct: 246 HLDQAREQISRAPRPFPTMRLTRRPDSIDGYRISDFEVDGYEPHAAIKADVAV 298 >gi|61207195|gb|AAX40328.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 166/263 (63%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG+++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 289 WFLRGETHAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|320586368|gb|EFW99047.1| thymidylate synthase [Grosmannia clavigera kw1407] Length = 316 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 126/306 (41%), Positives = 168/306 (54%), Gaps = 44/306 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R ++ G R DRTG GT S F +F LS PLLTTK+V + V+ Sbjct: 10 YQYLDLVREILDSGERRPDRTGTGTLSIFAPRPFKFQLSDNGRLVLPLLTTKRVFHRGVI 69 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102 ELLWF++G+++ L G+ IWD ++ G+LGP+YG QWR + Sbjct: 70 AELLWFIQGNTSSLALSNAGIKIWDGNGSREFLDSVGLSHRAEGDLGPVYGFQWRHFGAE 129 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155 DY +DQ++ ++ LR DPY+RR I+SAWN + MALPPCH QFYV Sbjct: 130 YVDASTDYTSQGVDQLADVIHKLRTDPYNRRIILSAWNPKDLPSMALPPCHMFAQFYVSF 189 Query: 156 -----------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 G L CQLYQRS D+ LG+PFNIASY+LLT MLA V G Sbjct: 190 PRQDQGQEDSSKDTQKVKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGS 249 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAA 257 F H +GD H+Y +H E QL R PR PQ+ I ++ + ++ EDF ++ Y PH Sbjct: 250 FTHVMGDAHIYIDHAEALQTQLEREPREFPQLEIMRDVGGSIDGWKEEDFVIKGYTPHKP 309 Query: 258 ILAKVS 263 I K+S Sbjct: 310 IAMKMS 315 >gi|3097066|emb|CAA06648.1| thymidylate synthase [Encephalitozoon cuniculi] Length = 294 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 136/284 (47%), Positives = 187/284 (65%), Gaps = 22/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 HQYLDL++H+++ G+ R DRTG G S FG MRF L FPLLTT++V ++ VV ELL Sbjct: 10 HQYLDLVKHILENGARRMDRTGTGALSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW-----------ADKDGELGPIYGVQWRSWP------- 102 +FLRG+++ L + GV IW++ ++G+LGPIYG QWR + Sbjct: 70 FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 Y+G +DQI+S + ++RA+P SRR +VSAWN + MALPPCH LFQF V +GKLSC Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H + Q+ Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQIQ 249 Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVS 263 R PR P++ ++P + F+YEDF L Y+PH AI +S Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMS 293 >gi|126640531|ref|YP_001083515.1| thymidylate synthase [Acinetobacter baumannii ATCC 17978] Length = 247 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 136/247 (55%), Positives = 173/247 (70%), Gaps = 16/247 (6%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD-------- 85 MRFDLSKGFPLLTTKKVH++S+V ELLWFL+GD+NV YL + V+IWDEWA Sbjct: 1 MRFDLSKGFPLLTTKKVHFRSIVIELLWFLKGDTNVKYLQDNKVTIWDEWATAEQTARFG 60 Query: 86 -KDGELGPIYGVQWRSWP-------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + ELGP+YG QWR++ Y+ + DQI ++ ++ +P SRR IVS WN Sbjct: 61 RPEHELGPVYGHQWRNFGATKNADGTYNQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNE 120 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 ++ALPPCH LFQF+V + KLSCQLYQRS DVFLG+PFNIASY+LLT M+A V G G Sbjct: 121 AGQVALPPCHTLFQFFVQDNKLSCQLYQRSADVFLGVPFNIASYALLTHMIAQVCGLDVG 180 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 +F+ T GD HLY NHFEQA LQL+R P L Q+ +NP++ D+ F++ED + YE H A Sbjct: 181 DFVWTGGDTHLYANHFEQAKLQLTREPLPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPA 240 Query: 258 ILAKVSV 264 I A V+V Sbjct: 241 IKAPVAV 247 >gi|126462805|ref|YP_001043919.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17029] gi|171855224|sp|A3PLD1|TYSY_RHOS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|126104469|gb|ABN77147.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17029] Length = 298 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 126/293 (43%), Positives = 173/293 (59%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDLL ++ G R DRTGVGT S FG +RFDLS G P+LTTK+V+WK+ V E+L Sbjct: 6 QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSDGQVPILTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL G +N+ L + V IW +W + GELGP Sbjct: 66 WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEEISQAAFEQRILEDEAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI++++++LR +P SRR + AWNVA + +MALPPCH ++Q+ Sbjct: 126 VYGRQWRRWLGPDGREHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+ LYQRS D+ LG PFN + L +M+A G G+ + GD HLY N Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H +QA Q R+PR P+M + + +R EDF + Y+PH AI A+V+V Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRQADGIDDYRIEDFAVEGYDPHPAIAAEVAV 298 >gi|61207219|gb|AAX40340.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 124/263 (47%), Positives = 166/263 (63%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A V G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKVTGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|166164567|gb|ABY83782.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale] Length = 622 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 123/275 (44%), Positives = 175/275 (63%), Gaps = 20/275 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ V+ G+ + DRTGVG S FGY M+++L++ FPLLTTKK+ + ++ ELLW Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Y+ IDQ+ +I+ ++ +P SRR I+ A NV +DKMALPPCH L QFY+ +GKLSC Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCARNVKDLDKMALPPCHILCQFYIFDGKLSC 527 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D+ LG+PFNIASYS+ T MLA V Q EFIH LG+ H+YNNH + +QL+ Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 R P P + +NP I ++ F DFT+ +Y H Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622 >gi|61207215|gb|AAX40338.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDSGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|115299506|gb|ABI93723.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] Length = 369 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 127/267 (47%), Positives = 167/267 (62%), Gaps = 21/267 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYLD++R ++K G + DRTGVGT S FG MRF+L++ FPLLTTKKV ++ VV ELL Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGVVEELLR 163 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102 FLRGD+N L GV IW+ ++ +LGP+YG QWR + Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY+ +DQ+ ++Q L+ +P SRR I+SAWN + + +MALPPCH + QF+V NGKLSC Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQMALPPCHVMSQFFVANGKLSC 283 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +YQRS D LGIPFNIASY+LLT MLA GEF+H LGD H+Y+NH + Q+ Sbjct: 284 MMYQRSCDFGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFT 248 R P P + I L + YEDF Sbjct: 344 RVPYPFPILKIKSK-KSLFDYTYEDFE 369 >gi|61207207|gb|AAX40334.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207209|gb|AAX40335.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207211|gb|AAX40336.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207213|gb|AAX40337.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207221|gb|AAX40341.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|14599974|gb|AAK71186.1|AF358968_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma vespertilionis] Length = 491 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCKEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490 >gi|14599890|gb|AAK71144.1|AF358926_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599892|gb|AAK71145.1|AF358927_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599894|gb|AAK71146.1|AF358928_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599896|gb|AAK71147.1|AF358929_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599898|gb|AAK71148.1|AF358930_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599900|gb|AAK71149.1|AF358931_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599904|gb|AAK71151.1|AF358933_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599906|gb|AAK71152.1|AF358934_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599908|gb|AAK71153.1|AF358935_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599912|gb|AAK71155.1|AF358937_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599914|gb|AAK71156.1|AF358938_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599916|gb|AAK71157.1|AF358939_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599918|gb|AAK71158.1|AF358940_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599922|gb|AAK71160.1|AF358942_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] Length = 491 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490 >gi|51869967|ref|YP_073520.1| thymidylate synthase [Lymphocystis disease virus - isolate China] gi|51858175|gb|AAU10859.1| thymidylate synthase [Lymphocystis disease virus - isolate China] Length = 286 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 124/281 (44%), Positives = 175/281 (62%), Gaps = 21/281 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+ L++++ G + DRTG GT S FG Q R+DLS FPL TTK++ W+ +V ELLWFL Sbjct: 7 YLNQLKYILANGRLKIDRTGTGTLSVFGLQNRYDLST-FPLFTTKRMFWRGIVEELLWFL 65 Query: 64 RGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP--------D 103 +G +N L + V IWD + ++G+LGPIYG QWR + + Sbjct: 66 KGSTNSLNLSKKSVHIWDAYGSKSNLNRLGFNHREEGDLGPIYGFQWRHFGANYINCHTN 125 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y+G IDQ+ I+ L+ +P RR +++AWN + ID+ LPPCH L QFY + LSCQ Sbjct: 126 YEGQGIDQLQIIITKLKTNPNDRRILMTAWNPSDIDQAVLPPCHVLCQFYAIDNILSCQC 185 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFN+ASY+LLT ++A + + GEFIHTLGD H+Y +H + QL+RS Sbjct: 186 YQRSADMGLGVPFNVASYALLTYLIAQAVDMKPGEFIHTLGDAHIYLDHIKAIKEQLTRS 245 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + P +I+ +L F++EDF L Y PH AI +S+ Sbjct: 246 IKPSPVVILKKKSDNLCDFKFEDFELLDYNPHPAISLDLSI 286 >gi|296283919|ref|ZP_06861917.1| thymidylate synthase [Citromicrobium bathyomarinum JL354] Length = 310 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 129/303 (42%), Positives = 172/303 (56%), Gaps = 40/303 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL+ H+ + G +R DRTG+GTRS FG Q+R L+ PLLTTK+V+WK+ E L Sbjct: 8 QQYLDLMAHIWRTGDERVDRTGIGTRSVFGAQLRCSLTDNAVPLLTTKRVYWKTAARETL 67 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD----------------------------KDGELGP 92 WFL G +N+ L GV IW+EW + G+LGP Sbjct: 68 WFLTGATNIRPLVLQGVKIWNEWPHARYVKETGDDLPLDDFVQRIADDESFAARWGDLGP 127 Query: 93 IYGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 +YG QW WP Y G IDQ+S ++ SLR +P SRRHI+ WNVA +D+MAL Sbjct: 128 VYGKQWVDWPTYRYRPDGLYEKGEGIDQVSQVIDSLRTNPGSRRHIIEGWNVAELDRMAL 187 Query: 144 PPCHCLFQFYV--DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 PPCH +QF+V + +L+C LYQRS DV LG+PFN+ +LLT M+A + GE + Sbjct: 188 PPCHKTYQFHVGANGTQLNCLLYQRSCDVALGLPFNLFGAALLTRMIAQQTDLEPGELVW 247 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 GD HLY NH + QL R PR P++ I + + EDF++ Y+PH I A Sbjct: 248 MGGDTHLYLNHAHLIEEQLGREPRGAPRLEITRRPPGIFDYAIEDFSVSGYDPHPPIKAP 307 Query: 262 VSV 264 V+V Sbjct: 308 VAV 310 >gi|61207201|gb|AAX40331.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207203|gb|AAX40332.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207205|gb|AAX40333.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|161622629|ref|YP_001595355.1| dTMP thymidylate synthase [Enterobacteria phage JS98] gi|52139835|gb|AAU29207.1| dTMP thymidylate synthase [Enterobacteria phage JS98] Length = 285 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 125/290 (43%), Positives = 171/290 (58%), Gaps = 31/290 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L++ +++ G + DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G +IWDE + GELGP+YG QWR + Sbjct: 61 WFLSGSTNVNDLRFRTHGSLIDGKTIWDENYENQAKDLGYHSGELGPVYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ+ I+ ++ P RR IVSAWN A ID+MALPPCHC +QF V NG L Q YQ Sbjct: 117 -GGVDQVVEIIDRIKKMPNDRRQIVSAWNPAEIDQMALPPCHCFYQFNVRNGHLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ + + G+ H+Y+NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 235 Query: 226 TLPQMIINPNIVDL-----------LSFRYEDFTLRSYEPHAAILAKVSV 264 L ++ IN + S + DF L+ YE H I AK++V Sbjct: 236 ELCELEINLPEEFILWDTKTQLSWVDSMKPSDFVLKGYESHPTIKAKMAV 285 >gi|61207183|gb|AAX40322.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207185|gb|AAX40323.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207191|gb|AAX40326.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|61207197|gb|AAX40329.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|115611864|ref|XP_001201855.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115615354|ref|XP_796678.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 432 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 117/256 (45%), Positives = 160/256 (62%), Gaps = 21/256 (8%) Query: 30 FGYQMRFDLSKGFPLLTTKK-VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD- 87 F + F LS FPLLTTK+ V W+ V ELLWF++G +N + L + IWD KD Sbjct: 177 FLFTFIFSLSDQFPLLTTKRRVFWRGVAEELLWFVKGCTNATELRDKNIHIWDANGSKDF 236 Query: 88 -----------GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRH 128 G+LGP+YG QWR + DY G +DQ ++++++++ + RR Sbjct: 237 LEKRGLGHHKEGDLGPVYGFQWRHFGAEYKDRFTDYTGQGVDQHTNVIKTIKNNSDDRRI 296 Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 I SAWN + KMALPPCH QFYV NG+LSCQLYQRSGD+ LG+PFNIASYSLLT M+ Sbjct: 297 ITSAWNPPDLPKMALPPCHAFVQFYVCNGELSCQLYQRSGDMGLGVPFNIASYSLLTYMI 356 Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFT 248 A V G + G+F+HTLGD H+Y NH E QL R PR P++ I + ++ F++EDF Sbjct: 357 AHVTGLKPGDFVHTLGDAHVYLNHIEPLKDQLKRVPRQFPKLNIKRKVTNIDDFKFEDFE 416 Query: 249 LRSYEPHAAILAKVSV 264 + Y+P+ I +++V Sbjct: 417 IEGYKPYPKITMQMAV 432 >gi|61207189|gb|AAX40325.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|14599920|gb|AAK71159.1|AF358941_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599924|gb|AAK71161.1|AF358943_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599926|gb|AAK71162.1|AF358944_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599928|gb|AAK71163.1|AF358945_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599930|gb|AAK71164.1|AF358946_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599932|gb|AAK71165.1|AF358947_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599950|gb|AAK71174.1|AF358956_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599954|gb|AAK71176.1|AF358958_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599958|gb|AAK71178.1|AF358960_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599962|gb|AAK71180.1|AF358962_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599966|gb|AAK71182.1|AF358964_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] Length = 491 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490 >gi|14599956|gb|AAK71177.1|AF358959_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] Length = 491 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490 >gi|302689813|ref|XP_003034586.1| thymidylate synthase [Schizophyllum commune H4-8] gi|300108281|gb|EFI99683.1| thymidylate synthase [Schizophyllum commune H4-8] Length = 317 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 126/296 (42%), Positives = 168/296 (56%), Gaps = 33/296 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59 HQYL+L++ V+ G R DRTG GT + F +RF L+ PL+TTK+ + +V EL Sbjct: 22 HQYLELIQRVMDMGEVRADRTGTGTIALFAPPNLRFSLADSTLPLITTKRTFLRGIVEEL 81 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWF+ G ++ + L R V+IWD K+ G+LGP+YG QWR + Sbjct: 82 LWFIHGCTDSTVLSRKKVTIWDGNGSKEFLEGRGLGHRREGDLGPVYGFQWRHFGAEYKD 141 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ+ + ++ +P RR I+SAWN I MALPPCH L QFYV Sbjct: 142 ADADYTGQGVDQLRECIHKIKHNPTDRRIIMSAWNPKDIPLMALPPCHLLCQFYVHLPPA 201 Query: 156 ------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 KLSC +YQRS D+ LG+PFNIASY+LLT M+A V G E I LGD H+Y Sbjct: 202 GAPDTQKPKLSCLMYQRSADLGLGVPFNIASYALLTHMIAHVTGTDAHELIIQLGDAHVY 261 Query: 210 NNHFEQADLQLSRSPRTLPQMIINP-NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H E QL R PR P++ +I D+ F+YEDF + Y PH +I K+SV Sbjct: 262 RDHVEALQTQLQREPRAFPKLRWGRDDIEDIEDFKYEDFVVEGYNPHPSIPMKMSV 317 >gi|14599934|gb|AAK71166.1|AF358948_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599936|gb|AAK71167.1|AF358949_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599938|gb|AAK71168.1|AF358950_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599940|gb|AAK71169.1|AF358951_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599942|gb|AAK71170.1|AF358952_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599944|gb|AAK71171.1|AF358953_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599946|gb|AAK71172.1|AF358954_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599948|gb|AAK71173.1|AF358955_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599952|gb|AAK71175.1|AF358957_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599960|gb|AAK71179.1|AF358961_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599964|gb|AAK71181.1|AF358963_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599968|gb|AAK71183.1|AF358965_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] Length = 491 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490 >gi|154317591|ref|XP_001558115.1| hypothetical protein BC1G_03147 [Botryotinia fuckeliana B05.10] gi|150844321|gb|EDN19514.1| hypothetical protein BC1G_03147 [Botryotinia fuckeliana B05.10] Length = 356 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 126/316 (39%), Positives = 172/316 (54%), Gaps = 53/316 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-----KGFPLLTTKKVHWKSV 55 +QYLDL+R +++ G R DRTG GT S F ++F L+ PLLTTK+V ++V Sbjct: 41 YQYLDLIREILETGEHRPDRTGTGTISLFAPAPLKFSLTSPTGTPILPLLTTKRVFLRAV 100 Query: 56 VHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP- 102 + ELLWF+ G ++ L G+ IWD + +G+LGP+YG QWR + Sbjct: 101 LTELLWFISGSTSSLPLSAAGIKIWDGNGSRAYLDSIGLSHRAEGDLGPVYGFQWRHFGA 160 Query: 103 -------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD 155 DY G +DQ++ IV L+ +P+ RR I+SAWNVA I MALPPCH QFYV Sbjct: 161 KYIDAETDYTGQGVDQLAEIVWKLKNNPWDRRIILSAWNVADIKLMALPPCHMFAQFYVS 220 Query: 156 NGK------------------------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 K L CQLYQRS D+ LG+PFNIASY+LLT +LA Sbjct: 221 FPKSSTASSTSEQNTNPSNPDSKPKGILHCQLYQRSCDMGLGVPFNIASYALLTHILAHA 280 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFT 248 G F HT+GD H+Y +H + +QL R PR P++ I + ++ E+F Sbjct: 281 CDLTPGTFTHTMGDAHVYVDHVDALKVQLEREPREFPELGILREDQGSGVVDGWKPEEFE 340 Query: 249 LRSYEPHAAILAKVSV 264 +R Y+PH I K+SV Sbjct: 341 VRGYKPHGKIDMKMSV 356 >gi|85708445|ref|ZP_01039511.1| Thymidylate synthase [Erythrobacter sp. NAP1] gi|85689979|gb|EAQ29982.1| Thymidylate synthase [Erythrobacter sp. NAP1] Length = 322 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 130/304 (42%), Positives = 176/304 (57%), Gaps = 42/304 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYL+L+R + + GS+R DRTG GTRS G +R+DL+ G PLLTTK+V+WK+ E+LW Sbjct: 19 QYLNLMREIWERGSERMDRTGTGTRSIAGAMLRYDLADGAMPLLTTKRVYWKTATREMLW 78 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93 FL G++N+ L GV IW+EW + G+LGP+ Sbjct: 79 FLTGETNIRPLVLQGVKIWNEWPHANYVRETGDEIALEDFVKRIADDEGFAKRWGDLGPV 138 Query: 94 YGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144 YG QW WP Y G I+Q++ +V+SLR +P SRRHI+ WNVA +D+MALP Sbjct: 139 YGKQWVDWPTYRYRKDGLYEKGEGINQVAEVVESLRNNPGSRRHIIEGWNVAELDRMALP 198 Query: 145 PCHCLFQFYVD----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 PCH +QF+V +L+C LYQRS DV LG+PFN+ S +LLT M+A G + GE I Sbjct: 199 PCHKTYQFHVAGAKGKERLNCLLYQRSCDVALGLPFNLWSAALLTRMMAQQTGLEAGELI 258 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260 GDVHLY NH + QL+R P P++ I + ++ EDF + Y P I A Sbjct: 259 WMGGDVHLYLNHAHLIEEQLTREPTGNPRLEITRKPETIFDYKIEDFRVDDYAPLPPIKA 318 Query: 261 KVSV 264 V+V Sbjct: 319 PVAV 322 >gi|149186677|ref|ZP_01864988.1| thymidylate synthase [Erythrobacter sp. SD-21] gi|148829585|gb|EDL48025.1| thymidylate synthase [Erythrobacter sp. SD-21] Length = 313 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 134/306 (43%), Positives = 174/306 (56%), Gaps = 43/306 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL+R + G +RRDRTG+GTRS FG Q+RFDL++G PL+TTK+V+WK+ ELL Sbjct: 8 QQYLDLMRLIWLEGDERRDRTGIGTRSVFGAQLRFDLAEGAMPLVTTKRVYWKTATRELL 67 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK----------------------------DGELGP 92 WFL GD+N+ L GV IW+EW G+LGP Sbjct: 68 WFLTGDTNIRPLVLQGVKIWNEWPHARYVEQTGDEIELEAFVQKIADDQQFAAMWGDLGP 127 Query: 93 IYGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 +YG QW WP Y G I+Q++ +V+SL +P SRRHI+ WNVA + +MAL Sbjct: 128 VYGKQWVDWPTYQPVKGGLFRKGRGINQVAEVVESLNENPGSRRHIIEGWNVAEVPRMAL 187 Query: 144 PPCHCLFQFYVDNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 PPCH +Q++V G L+ LYQRS DV LG+PFN+ S +LL M+A + Q GE Sbjct: 188 PPCHKTYQYHVSTGIDGEPLLNGILYQRSCDVALGLPFNLWSGALLLRMIAQQVDMQPGE 247 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 F+ GD HLY NH QLSR P LP + I + +R EDF + Y PH I Sbjct: 248 FVWMGGDTHLYLNHEHLVKEQLSREPHGLPTLEIVRRPPTIFDYRIEDFAVHDYTPHGPI 307 Query: 259 LAKVSV 264 A V+V Sbjct: 308 KAPVAV 313 >gi|14599902|gb|AAK71150.1|AF358932_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] gi|14599910|gb|AAK71154.1|AF358936_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi] Length = 491 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 122/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+ LT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYAFLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490 >gi|68073909|ref|XP_678869.1| bifunctional dihydrofolate reductase-thymidylate synthase [Plasmodium berghei strain ANKA] gi|56499470|emb|CAH97634.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Plasmodium berghei] Length = 585 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 124/281 (44%), Positives = 180/281 (64%), Gaps = 20/281 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL+++ +I G+++ DRTG G S FGY M+F+L++ FPLLTTKK+ + ++ ELLW Sbjct: 305 YQYLNIIYDMIMHGNNQDDRTG-GVLSKFGYMMKFNLNEYFPLLTTKKLFIRGIIEELLW 363 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD-----------GELGPIYGVQWRSWP-------- 102 F+RG++N + L V IW+ ++ +LGPIYG QWR + Sbjct: 364 FIRGETNGNTLLEKNVRIWEANGTREFLDRKLFHREVNDLGPIYGFQWRHFGAEYTDMHD 423 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 +Y +DQ+ +I+ ++ DP RR I+ AWNV +D+MALPPCH L QFYV +GKLSC Sbjct: 424 NYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSCI 483 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS D+ LG+PFNIASYS+ T M+A V Q EFIH LG+ H+YNNH E +QL+R Sbjct: 484 MYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQAAEFIHVLGNAHVYNNHIESLKIQLNR 543 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 +P P + +NP+I ++ F DFT+++Y H I ++ Sbjct: 544 TPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKINMDMA 584 >gi|163839708|ref|YP_001624113.1| thymidylate synthase [Renibacterium salmoninarum ATCC 33209] gi|162953184|gb|ABY22699.1| thymidylate synthase [Renibacterium salmoninarum ATCC 33209] Length = 208 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 126/207 (60%), Positives = 159/207 (76%) Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 ELLWFLRGDSNV +L +GV IW+EWAD DGELGP+YGVQWRSWP DG IDQI+S+++ Sbjct: 2 ELLWFLRGDSNVHWLQENGVKIWNEWADDDGELGPVYGVQWRSWPTPDGQHIDQIASLIE 61 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 +L+A+P SRRHIVSAWNVA + KMALPPCH FQFYV +GKLSCQLYQRS D+FLG+PFN Sbjct: 62 ALKANPDSRRHIVSAWNVAELSKMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFN 121 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 IASY+LL +M+A +G + GEFI T GD H+Y++H Q + QLSR P P + IN Sbjct: 122 IASYALLALMVAQQVGLEPGEFIWTGGDTHIYDDHLAQVEEQLSREPFPYPSLRINRKPT 181 Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + +EDF + +Y+ HA I A ++V Sbjct: 182 SIFDYNFEDFEVLNYQHHATIKAPIAV 208 >gi|299779177|ref|YP_003734371.1| dTMP thymidylate synthase [Enterobacteria phage IME08] gi|298105906|gb|ADI55550.1| dTMP thymidylate synthase [Enterobacteria phage IME08] Length = 289 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 128/292 (43%), Positives = 172/292 (58%), Gaps = 33/292 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L++ +++ G + DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL Sbjct: 3 MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 62 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G +IWDE + DGELGP+YG QWR + Sbjct: 63 WFLSGSTNVNDLRERTHGSRTEGKTIWDENYENQAISLGYSDGELGPVYGKQWRDF---- 118 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 IDQ+ IV+ ++ P RR IVSAWN A I+KMALPPCHC +QF V NG L Q YQ Sbjct: 119 -GGIDQVVEIVERIKKMPNDRRQIVSAWNPAEINKMALPPCHCFYQFNVRNGHLDLQWYQ 177 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ + + G+ H+Y+NH EQ L R P+ Sbjct: 178 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 237 Query: 226 TLPQMIINPNIVDLLSFR-------------YEDFTLRSYEPHAAILAKVSV 264 L ++ I D + EDF L+ YE H I AK++V Sbjct: 238 ELCELEIRYWHKDFHEWTTEQQLAWVTGMMYPEDFVLKGYESHPTIKAKMAV 289 >gi|14599970|gb|AAK71184.1|AF358966_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi marinkellei] gi|14599972|gb|AAK71185.1|AF358967_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi marinkellei] Length = 491 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGADYTHH 347 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 348 DANYDGQGVDQIKTIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E QL Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCKEQL 467 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ + L + Sbjct: 468 KRVPRAFPYLVFHREREFLEDYE 490 >gi|296818039|ref|XP_002849356.1| thymidylate synthase [Arthroderma otae CBS 113480] gi|238839809|gb|EEQ29471.1| thymidylate synthase [Arthroderma otae CBS 113480] Length = 349 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 130/310 (41%), Positives = 171/310 (55%), Gaps = 47/310 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 40 HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFALSKPSSDPSNPDPIPVLPLLTTK 99 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159 Query: 97 QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ +V+ L+ PY RR I+SAWN A + KMALPPCH Sbjct: 160 QWRHFGAEYVDAKTDYAGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219 Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 QFYV G LSC LYQRS D+ LG+PFNIASY+LLT M A G Sbjct: 220 FAQFYVSFPPQQEGDKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPG 279 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFTLRSYEP 254 IHT+GD H+Y +H E QL+R P P + I + ++ ++ DF + Y+P Sbjct: 280 TLIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKIHRTDRGSGEMDGWKDSDFEVLDYKP 339 Query: 255 HAAILAKVSV 264 H I K+SV Sbjct: 340 HKLIKMKMSV 349 >gi|86137413|ref|ZP_01055990.1| Thymidylate synthase [Roseobacter sp. MED193] gi|85825748|gb|EAQ45946.1| Thymidylate synthase [Roseobacter sp. MED193] Length = 298 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 129/293 (44%), Positives = 172/293 (58%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 +QYLDL+ V++ G +R DRTGVGTRS FG +RFDLS G P+ TTK+V+WK+ V E+L Sbjct: 6 YQYLDLMERVLEQGDERIDRTGVGTRSLFGAMVRFDLSDGTAPIFTTKRVYWKTAVKEML 65 Query: 61 WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92 WFL G +N+ L + V IW D +A + GELGP Sbjct: 66 WFLTGQTNIQSLLKDNVRIWTDWPLATYRRETGEDVSQEEFEQRVVNDDAFAARWGELGP 125 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W DG DQI+ +V++LR P SRR + WNVA + +MALPPCH ++Q+ Sbjct: 126 VYGKQWRRWMGADGREHDQIAGLVRALRETPASRRMLFHGWNVAELGEMALPPCHMVYQY 185 Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 +V +G+L+C L+QRS D+ LG PFN S L +MLA GE + GDVHLY N Sbjct: 186 HVTSDGRLNCLLFQRSVDLLLGKPFNCVGASALLLMLAQQADLVPGELVWVGGDVHLYLN 245 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 HFEQA Q+ R PR P+M + + + DF + Y PH I A+V+V Sbjct: 246 HFEQAREQIKRQPRPFPKMSLLKRAASIDDYEIGDFQVDGYAPHPPISAEVAV 298 >gi|61207193|gb|AAX40327.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 122/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QW + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWHHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|163737393|ref|ZP_02144810.1| Thymidylate synthase [Phaeobacter gallaeciensis BS107] gi|161388919|gb|EDQ13271.1| Thymidylate synthase [Phaeobacter gallaeciensis BS107] Length = 246 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 128/246 (52%), Positives = 172/246 (69%), Gaps = 13/246 (5%) Query: 32 YQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELG 91 Q R+ L+ GFPL+TTKK+H +S++HELLWFL GD+N+ YL +GVSIWDEWAD++G+LG Sbjct: 1 MQTRYPLADGFPLVTTKKLHLRSIIHELLWFLSGDTNIGYLKDNGVSIWDEWADENGDLG 60 Query: 92 PIYGVQWRSWPD-------------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 P+YG QWR +P Y +DQI+++V +R P SRR IV+AWN + Sbjct: 61 PVYGHQWRHFPRLELAEGTTGEEPLYRAGTVDQIANLVDMIRNSPDSRRLIVTAWNPGDV 120 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 MALPPCH L+Q V ++ QLYQRS D+FLG+PFNIASY+LL MLA V G++ G+ Sbjct: 121 PDMALPPCHTLWQVRVQGRRMHLQLYQRSADMFLGVPFNIASYALLLKMLAHVTGYEAGD 180 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 FIHT+GD H+Y+NH +Q LQLSR P+ LP++ IN ++ + FRYEDF + +Y P I Sbjct: 181 FIHTIGDAHIYSNHMDQVKLQLSRRPQPLPELRINRDVSSIFEFRYEDFDVLNYTPDPGI 240 Query: 259 LAKVSV 264 A V+V Sbjct: 241 KAPVAV 246 >gi|326475782|gb|EGD99791.1| thymidylate synthase [Trichophyton tonsurans CBS 112818] Length = 351 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 131/312 (41%), Positives = 172/312 (55%), Gaps = 49/312 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK------------GFPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 40 HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPLLPLLTTK 99 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+YG Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159 Query: 97 QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ +V+ L+ PY RR I+SAWN A + KMALPPCH Sbjct: 160 QWRHFGAEYVDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219 Query: 149 LFQFYVD-------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 QFYV G LSC LYQRS D+ LG+PFNIASY+LLT M A Sbjct: 220 FAQFYVSFPPQKAGDEGKKGKGILSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSY 252 G FIHT+GD H+Y +H E QL+R P P + IN ++ ++ DF + Y Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339 Query: 253 EPHAAILAKVSV 264 +PH I K+S+ Sbjct: 340 KPHKLIKMKMSI 351 >gi|320103743|ref|YP_004179334.1| thymidylate synthase [Isosphaera pallida ATCC 43644] gi|319751025|gb|ADV62785.1| thymidylate synthase [Isosphaera pallida ATCC 43644] Length = 285 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 151/274 (55%), Positives = 189/274 (68%), Gaps = 13/274 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVG-----TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 YLDLLR V+ G + R VG S FG Q+R+DLS FPL TTK+V + SVVHE Sbjct: 12 YLDLLRDVLHHGRRQPTRAKVGGEFIDALSVFGRQVRYDLSDRFPLFTTKRVSFHSVVHE 71 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ- 117 LLWFLRG++NV L GV+IWDEWAD+ GELGPIYG QWR+W DG V DQI +I+ Sbjct: 72 LLWFLRGETNVRSLQAAGVTIWDEWADEAGELGPIYGRQWRAWNGPDGRVFDQIQAILDG 131 Query: 118 --SLRADPY---SRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVF 171 LR DP RR I++AWNVA ++KMALPPCHCL QF++D+ G+LSCQLYQRS D+F Sbjct: 132 LTQLRQDPRASVGRRLILNAWNVADLEKMALPPCHCLAQFHLDDAGRLSCQLYQRSADLF 191 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFN+ASY+LLT ++A V G + GEFIHTLGD H+Y NH +Q QL R PR LP++ Sbjct: 192 LGVPFNVASYALLTRLIAHVQGLEPGEFIHTLGDAHIYVNHLDQVRRQLERDPRPLPRVT 251 Query: 232 INPNIV-DLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++ L R E L Y PH A+ +V+V Sbjct: 252 LAEDLDPTLKKVRREQIVLEGYHPHPALPGEVAV 285 >gi|238695380|ref|YP_002922573.1| dTMP (thymidylate) synthase [Enterobacteria phage JS10] gi|220029516|gb|ACL78450.1| dTMP (thymidylate) synthase [Enterobacteria phage JS10] Length = 285 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 123/290 (42%), Positives = 171/290 (58%), Gaps = 31/290 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L++ +++ G + DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G +IWDE + GELGP+YG QWR + Sbjct: 61 WFLSGSTNVNDLRFRTHGSLIDGKTIWDENYENQAKDLGYHSGELGPVYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ+ I+ ++ P RR IVSAWN A I++MALPPCHC +QF V NG L Q YQ Sbjct: 117 -GGVDQVVEIINRIKKMPNDRRQIVSAWNPAEINQMALPPCHCFYQFNVRNGHLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ + + G+ H+Y+NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 235 Query: 226 TLPQMII-----------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L ++ I + + S + DF L+ YE H I AK++V Sbjct: 236 DLCELEIDLPEEFILWDTKTQLSWIDSMKPSDFVLKGYESHPTIKAKMAV 285 >gi|119179951|ref|XP_001241483.1| conserved hypothetical protein [Coccidioides immitis RS] gi|303321055|ref|XP_003070522.1| thymidylate synthase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110218|gb|EER28377.1| thymidylate synthase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320036037|gb|EFW17977.1| thymidylate synthase [Coccidioides posadasii str. Silveira] Length = 357 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 131/319 (41%), Positives = 172/319 (53%), Gaps = 56/319 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49 HQYL+L+R ++ G R DRTG GT + F Q+RF LSK PLLTTK+ Sbjct: 39 HQYLNLIRTILATGEHRPDRTGTGTCAIFAPPQLRFSLSKPGPTPSSTPIPILPLLTTKR 98 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+YG Q Sbjct: 99 VFLRAVILELLWFISGCTSSLTLSEAGVKIWDGNGSREFLDSVGLSHREVGDLGPVYGFQ 158 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPCH Sbjct: 159 WRHFGAEYVDAKADYSGKGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPCHMF 218 Query: 150 FQFYVD---------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 QFYV G L+C LYQRS D+ LG+PFNIASY+LLT ML Sbjct: 219 AQFYVSFCNAALPEMENGTNEDADKKQKGTLNCLLYQRSCDMGLGVPFNIASYALLTHML 278 Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYE 245 A G IHT+GD H+Y +H QL+R P T P++ IN D+ + Sbjct: 279 AHAADLYPGTLIHTMGDAHVYLDHIAALQEQLTREPTTFPELRINRTDRGSGDMDGWAEG 338 Query: 246 DFTLRSYEPHAAILAKVSV 264 DF + Y+PH I K+SV Sbjct: 339 DFEVIGYKPHKMIKMKMSV 357 >gi|61207187|gb|AAX40324.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 122/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ + + G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRITREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|225681301|gb|EEH19585.1| bifunctional dihydrofolate reductase-thymidylate synthase [Paracoccidioides brasiliensis Pb03] Length = 360 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 130/313 (41%), Positives = 175/313 (55%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFD-----------LSKGFPLLTTKK 49 HQYL+L+R ++ G +R DRTG GTRS F Q+RF + PLLTTK+ Sbjct: 48 HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGSSSPSSRTPILPLLTTKR 107 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L + G+ IWD ++ G+LGP+YG Q Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSKAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH Sbjct: 168 WRHFGAEYIDAQTDYTGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227 Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 QFYV G LSCQLYQRS D+ LG+PFNIASY+LLT MLA Sbjct: 228 AQFYVSFPSHGGNTESGHEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRS 251 G IHT+GD H+Y +H E QL R P P+++I + + ++ E+F + Sbjct: 288 YPGTLIHTMGDAHVYLDHIESLQEQLKREPVDFPELVIKRDDRGSGVMDGWKEEEFEVVG 347 Query: 252 YEPHAAILAKVSV 264 Y+PH I K+SV Sbjct: 348 YKPHKGIKMKMSV 360 >gi|156049499|ref|XP_001590716.1| hypothetical protein SS1G_08456 [Sclerotinia sclerotiorum 1980] gi|154692855|gb|EDN92593.1| hypothetical protein SS1G_08456 [Sclerotinia sclerotiorum 1980 UF-70] Length = 354 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 126/312 (40%), Positives = 172/312 (55%), Gaps = 49/312 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-----KGFPLLTTKKVHWKSV 55 +QYLDL+R +++ G R DRTG GT S F ++F L+ PLLTTK+V ++V Sbjct: 43 YQYLDLIREILETGEHRPDRTGTGTISLFAPAPLKFSLTSPTGTPILPLLTTKRVFLRAV 102 Query: 56 VHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP- 102 + ELLWF+ G ++ L G+ IWD + +G+LGP+YG QWR + Sbjct: 103 LTELLWFISGSTSSLPLSAAGIKIWDGNGSRTYLDSIGLSHRAEGDLGPVYGFQWRHFGA 162 Query: 103 -------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD 155 DY G +DQ++ IV L+ +P+ RR I+SAWNVA I MALPPCH QFYV Sbjct: 163 KYIDAETDYTGQGVDQLAEIVWKLKNNPWDRRIILSAWNVADIKLMALPPCHMFAQFYVS 222 Query: 156 NGK--------------------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 K L CQLYQRS D+ LG+PFNIASY+LLT +LA Sbjct: 223 FPKTPDSSTSEANTNPESKPKGILHCQLYQRSCDMGLGVPFNIASYALLTHILAHACNLT 282 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSY 252 G F HT+GD H+Y +H + +QL R PR P++ I + ++ E+F +R Y Sbjct: 283 PGTFTHTMGDAHVYVDHVDALKIQLEREPREFPELGILREDRGSGVVDGWKGEEFEVRGY 342 Query: 253 EPHAAILAKVSV 264 +PH I K+SV Sbjct: 343 KPHGKIDMKMSV 354 >gi|61207217|gb|AAX40339.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 122/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S F QMRF L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFDAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|61207199|gb|AAX40330.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 493 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 122/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMR L PLLTTK+V W+ V ELL Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRSSLRNNRLPLLTTKRVFWRGVCEELL 288 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468 Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243 R PR P ++ L + Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491 >gi|163740938|ref|ZP_02148331.1| thymidylate synthase [Phaeobacter gallaeciensis 2.10] gi|161385929|gb|EDQ10305.1| thymidylate synthase [Phaeobacter gallaeciensis 2.10] Length = 246 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 129/246 (52%), Positives = 174/246 (70%), Gaps = 13/246 (5%) Query: 32 YQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELG 91 Q R+ L+ GFPL+TTKK+H +S++HELLWFL GD+N+ YL +GVSIWDEWAD++G+LG Sbjct: 1 MQTRYPLADGFPLVTTKKLHLRSIIHELLWFLSGDTNIGYLKDNGVSIWDEWADENGDLG 60 Query: 92 PIYGVQWRSWPD-------------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 P+YG QWR +P Y +DQI+++V+ +R P SRR IV+AWN A + Sbjct: 61 PVYGHQWRHFPRLELAPGTSGDEPLYRAGTVDQITNLVEMIRNSPDSRRLIVTAWNPADV 120 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 MALPPCH L+Q V ++ QLYQRS D+FLG+PFNIASY+LL MLA V G++ G+ Sbjct: 121 PDMALPPCHTLWQVRVQGRRMHLQLYQRSADMFLGVPFNIASYALLLKMLAHVTGYEAGD 180 Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258 FIHT+GD H+Y+NH +Q LQLSR P+ LP++ IN ++ + FRYEDF + +Y P I Sbjct: 181 FIHTIGDAHIYSNHMDQVKLQLSRRPQPLPELRINRDVSSIFEFRYEDFDVLNYTPDPGI 240 Query: 259 LAKVSV 264 A V+V Sbjct: 241 KAPVAV 246 >gi|51894252|ref|YP_076943.1| thymidylate synthase [Symbiobacterium thermophilum IAM 14863] gi|62901280|sp|Q67JQ1|TYSY_SYMTH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|51857941|dbj|BAD42099.1| thymidylate synthase [Symbiobacterium thermophilum IAM 14863] Length = 283 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 125/277 (45%), Positives = 174/277 (62%), Gaps = 16/277 (5%) Query: 3 QYLDLLRHVIKF-------GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSV 55 QYL+L R ++ G +RTG+GT FG ++ D +GFP LTTKK+ + SV Sbjct: 6 QYLELCREILAENEQEIAEGRWTPNRTGMGTVGVFGRMLKHDFKEGFPALTTKKLFFNSV 65 Query: 56 VHELLWFLRGDSNVSYLHRHGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISS 114 ELLWFL G +++ +LH G IWD+ A ++G +LGPIYG QWR+W DG DQI+ Sbjct: 66 KAELLWFLAGRTDLEFLHERGCHIWDKDAARNGGKLGPIYGKQWRAWEGADGRTYDQIAW 125 Query: 115 IVQSLRA--------DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ++Q +R P SRR +VS WNVA +++MALPPCH FQF+V +G+L ++QR Sbjct: 126 VIQQIREIAADPERPHPNSRRLVVSPWNVADLEEMALPPCHGPFQFHVKDGRLHLAVWQR 185 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S D+FLG+PFNIASYSLL M+A V G G + H L DVH+Y N +Q LQL+R P Sbjct: 186 SADLFLGVPFNIASYSLLLHMVAQVTGLAVGTYTHYLNDVHIYRNLLDQVRLQLTREPYP 245 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 LP++ +NP + ++ F +D L Y+ H I ++S Sbjct: 246 LPRLWLNPEVREIDQFTMDDIQLVDYKHHPPIRGELS 282 >gi|194246714|ref|YP_002004353.1| thymidylate synthase [Candidatus Phytoplasma mali] gi|254790246|sp|B3QZX0|TYSY_PHYMT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|193807071|emb|CAP18507.1| Thymidylate synthase [Candidatus Phytoplasma mali] Length = 288 Score = 307 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 137/293 (46%), Positives = 192/293 (65%), Gaps = 34/293 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL+L R ++ +G + DRT GTRS FGYQMRF+L KGFPLLTTKK+++K+++HELL Sbjct: 1 MQAYLNLCRDILNYGKKKIDRTKTGTRSIFGYQMRFNLEKGFPLLTTKKMNFKAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91 WF++GD+N+ YL ++ V+IW+EW + G+LG Sbjct: 61 WFIKGDTNIRYLVQNNVNIWNEWPYQKYCNSNFFQNLTLQEFIDKIIIDEKFAKIHGDLG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 PIYG QWR++ IDQ++ ++ ++ +P+SRR I++AW+ +I M LPPCH + Q Sbjct: 121 PIYGHQWRNF-----QGIDQLTDLISEIKKNPHSRRLILTAWDPTVIKDMLLPPCHVMIQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 YV+ K+S QLYQRSGDVFLGIPFNIASYSLL +++A G + EFIHT+GD H+YNN Sbjct: 176 CYVEKNKISMQLYQRSGDVFLGIPFNIASYSLLLIIIAQCTGLKPFEFIHTIGDAHIYNN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H EQ Q+ R P+ LP M +NP+I+D+ F + DF L YE + + V+V Sbjct: 236 HIEQIQKQIKRIPKKLPIMTLNPHIIDINQFTFNDFNLEKYESYGILKGVVAV 288 >gi|255936107|ref|XP_002559080.1| Pc13g06460 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583700|emb|CAP91715.1| Pc13g06460 [Penicillium chrysogenum Wisconsin 54-1255] Length = 336 Score = 307 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 125/313 (39%), Positives = 172/313 (54%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK----------GFPLLTTKKV 50 HQYL+L+R ++ G R DRTG GT+S F Q+RF LSK PLLTTK+V Sbjct: 24 HQYLNLIRTILSEGEHRPDRTGTGTQSIFAPPQLRFSLSKPNPEGGEPIPILPLLTTKRV 83 Query: 51 HWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQW 98 ++V+ ELLWF+ G ++ L G+ IWD ++G+LGP+YG QW Sbjct: 84 FLRAVLAELLWFISGCTSSLPLSEAGIKIWDGNGSREFLDKSGLGHREEGDLGPVYGFQW 143 Query: 99 RSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150 R + DY G +DQ+ +V L +P+ RR I+SAWN A + KMALPPCH Sbjct: 144 RHFGAEYVDAKTDYSGQGVDQLKDVVHKLIHNPFDRRIIMSAWNPADLKKMALPPCHMFA 203 Query: 151 QFYV----------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 QFYV + G LSC LYQRS D+ LG+PFNIASY+LLT +LA Sbjct: 204 QFYVSFPPGMKLDEKTGRPSEKGTLSCVLYQRSCDMGLGVPFNIASYALLTHILAHAADL 263 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRS 251 G IHT+GD H+Y +H + + QL R P P++ I + + ++ ++F + Sbjct: 264 HPGTLIHTMGDAHVYLDHIDALNEQLVREPTEFPELRIKRDDRGAAVVDGWKEDEFEVIG 323 Query: 252 YEPHAAILAKVSV 264 Y+PH I K+SV Sbjct: 324 YKPHKIIKMKMSV 336 >gi|109290183|ref|YP_656432.1| thymidylate synthetase [Aeromonas phage 25] gi|104345856|gb|ABF72756.1| thymidylate synthetase [Aeromonas phage 25] Length = 279 Score = 307 bits (787), Expect = 9e-82, Method: Composition-based stats. Identities = 124/282 (43%), Positives = 167/282 (59%), Gaps = 21/282 (7%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+ +I G + DRTGVGTRS FG +RFDLSKGFP T K++ + VV ELL Sbjct: 1 MIQYTDLVCDIITNGRKKTDRTGVGTRSVFGRMLRFDLSKGFPATTRKRLAFVPVVGELL 60 Query: 61 WFLRGDSNVSYLHRHG-------VSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WF++G +NV +L + +IWD+ +K DG LGP+YG QWR + + + Sbjct: 61 WFMQGSTNVEHLRKLTYGENSDRKTIWDDNYNKQAVDLGYSDGYLGPVYGKQWRMFGNKN 120 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ+ +++ ++A+P SRR +V AWN I+KMALPPCH FQF V GKLS Q Sbjct: 121 --PVDQLQNVIDQIKANPDSRRLLVVAWNPEDIEKMALPPCHYAFQFEVYEGKLSLMWSQ 178 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DV LG+PFNIASY+LL ++A + + GE + + DVH+Y NH LSR R Sbjct: 179 RSVDVGLGLPFNIASYALLVHIVARICNLEVGELVFSGADVHIYENHLSHLGGMLSREER 238 Query: 226 TLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264 LP + P+I L DF L Y+PH I ++V Sbjct: 239 PLPTLSF-PDIGSLSDLRLLEAADFRLDGYDPHPTIKLPMAV 279 >gi|302852458|ref|XP_002957749.1| hypothetical protein VOLCADRAFT_68527 [Volvox carteri f. nagariensis] gi|300256925|gb|EFJ41181.1| hypothetical protein VOLCADRAFT_68527 [Volvox carteri f. nagariensis] Length = 294 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 127/290 (43%), Positives = 169/290 (58%), Gaps = 27/290 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 YLDLLRHV++ G R DRTG GT S FG Q+RFD+S P+LTTKKV W+ V+ ELLW Sbjct: 5 QAYLDLLRHVLECGEPREDRTGTGTLSVFGRQLRFDISDCVPVLTTKKVAWQKVIQELLW 64 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDY----- 104 F+RGD++ + L R GV +WD + + +G++G YG QWR + Sbjct: 65 FMRGDTDAAILQRDGVRVWDGNSSRAFLDARGLRHLPEGDIGAGYGHQWRRFGSPYVDCK 124 Query: 105 -------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN- 156 + +DQ+ ++ LR +P SRR +SAWN +DKMALPPCH QFY D Sbjct: 125 TPPRQGAEAGGVDQLQFVLDELRRNPSSRRIFMSAWNPCDLDKMALPPCHVSAQFYADRA 184 Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 G LSC +YQRS DVFLG P+NI SYS+LT +LA+ G + E I + GD H+Y NH Q Sbjct: 185 GGLSCHMYQRSVDVFLGFPWNILSYSVLTYILAAKAGLKPKELIISTGDTHIYANHVGQV 244 Query: 217 DLQLSRSPRTLPQMIINPNI--VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL+R P P++ ++P + EDF + Y H I A +SV Sbjct: 245 RTQLARQPFAWPRLELSPAVAAKAFEDITLEDFRMVGYTSHPYIRADMSV 294 >gi|226288197|gb|EEH43710.1| thymidylate synthase [Paracoccidioides brasiliensis Pb18] Length = 360 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 130/313 (41%), Positives = 175/313 (55%), Gaps = 50/313 (15%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFD-----------LSKGFPLLTTKK 49 HQYL+L+R ++ G +R DRTG GTRS F Q+RF + PLLTTK+ Sbjct: 48 HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGSSSPSSRTPILPLLTTKR 107 Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97 V ++V+ ELLWF+ G ++ L + G+ IWD ++ G+LGP+YG Q Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSKAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167 Query: 98 WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 WR + DY G +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH Sbjct: 168 WRHFGAEYIDAQTDYMGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227 Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 QFYV G LSCQLYQRS D+ LG+PFNIASY+LLT MLA Sbjct: 228 AQFYVSFPSHGGNTESGHEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRS 251 G IHT+GD H+Y +H E QL R P P+++I + + ++ E+F + Sbjct: 288 YPGTLIHTMGDAHVYLDHIEALQEQLKREPVDFPELVIKRDDRGSGVMDGWKEEEFEVVG 347 Query: 252 YEPHAAILAKVSV 264 Y+PH I K+SV Sbjct: 348 YKPHKGIKMKMSV 360 >gi|227822598|ref|YP_002826570.1| thymidylate synthase [Sinorhizobium fredii NGR234] gi|254790247|sp|C3MEE8|TYSY_RHISN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|227341599|gb|ACP25817.1| thymidylate synthase [Sinorhizobium fredii NGR234] Length = 305 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 126/299 (42%), Positives = 172/299 (57%), Gaps = 36/299 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYLDL+ +++ G R DRTG GT S FG QMRF LS G P+ TTKKV+WK+ V E+L Sbjct: 7 YQYLDLMSELLETGDRRMDRTGEGTLSLFGKQMRFKLSDGTIPIFTTKKVYWKTSVKEML 66 Query: 61 WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92 WFL G +N+S L R V IW DE+A + G+LGP Sbjct: 67 WFLTGQTNISSLLRENVRIWTDWPLAKYRKATGETISQEQFEDRIVASDEFASEWGDLGP 126 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR W D DG DQI++++ +L+ +P SRR + AWNV +D+MAL PCH +QF Sbjct: 127 VYGKQWRRWVDNDGQEHDQIATVISTLKTNPTSRRILFHAWNVGELDRMALHPCHMTYQF 186 Query: 153 YVD-------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 +V +LS ++QRS D+FLG PFNI ++L M+A + GE + GD Sbjct: 187 HVSWPNGQDGRPQLSMMVHQRSCDIFLGAPFNICQQAVLLAMIAQQVDMDRGELVWLGGD 246 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 HLY NH +QA LQLSR P+ P++ I + + +DF + Y+ H I A V+V Sbjct: 247 THLYLNHLDQARLQLSRKPKPFPKLEIKRRPASIDGYTIDDFEVSEYQSHERIEAPVAV 305 >gi|164659149|ref|XP_001730699.1| hypothetical protein MGL_2153 [Malassezia globosa CBS 7966] gi|159104596|gb|EDP43485.1| hypothetical protein MGL_2153 [Malassezia globosa CBS 7966] Length = 535 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 120/297 (40%), Positives = 168/297 (56%), Gaps = 34/297 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ--MRFDLSKG-FPLLTTKKVHWKSVVHE 58 +QYL+L+ +I+ G R DRTG GT + F ++FDLS G PLLTTK+V ++ V+ E Sbjct: 239 YQYLNLVSSIIRHGEIRADRTGTGTIAQFAPTRTLKFDLSGGKLPLLTTKRVFFRGVLEE 298 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP---- 102 LLWF+ G ++ L V IWD ++G+LGPIYG QWR + Sbjct: 299 LLWFIAGCTDAKRLSERDVHIWDGNGSLEFLQRRGLSHRREGDLGPIYGFQWRHFGAKYI 358 Query: 103 ----DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--- 155 DY G +DQ++ ++ +R +P RR ++ AWN A +D MALPPCH L QF+V Sbjct: 359 DADTDYTGQGVDQLAQVIHQIRHNPADRRILLCAWNPADLDSMALPPCHILCQFFVSMPT 418 Query: 156 --------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVH 207 +L CQ+YQRS D+ LG+PFNIASYSLLT +A+V + EF +GD H Sbjct: 419 TDAMSKGQRPRLKCQMYQRSCDLGLGVPFNIASYSLLTHFIAAVTDCEAAEFTLVMGDAH 478 Query: 208 LYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Y +H QL R+PR P + I N+ + R +D L +Y PH I ++SV Sbjct: 479 VYLDHVHPLQEQLRRTPRAFPTVHIRRNVTSIDEIRPDDVQLLNYSPHGKINMQMSV 535 >gi|328771286|gb|EGF81326.1| hypothetical protein BATDEDRAFT_10605 [Batrachochytrium dendrobatidis JAM81] Length = 333 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 135/311 (43%), Positives = 173/311 (55%), Gaps = 49/311 (15%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYLDL+R +I G R+DRTG GT S F Q+RF L+ PLLTTK+ + V EL+ Sbjct: 23 QYLDLVRQIIGTGDLRKDRTGTGTLSLFAPPQLRFSLADNTLPLLTTKRTFLRPVFEELM 82 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+RG ++ L GV IWD ++ G+LGPIYG QWR + Sbjct: 83 WFIRGQTDSKILAGKGVHIWDANGSREALDRAGLGHRQEGDLGPIYGFQWRHFGASYENA 142 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG--- 157 DY G IDQ+ +++ L ++P RR I+SAWN I MALPPCH L Q YV Sbjct: 143 DTDYTGKGIDQLEKVIEQLVSNPTDRRIILSAWNPLAIPDMALPPCHILAQLYVSTPSET 202 Query: 158 ----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 +LSCQLYQRS D+ LG+PFNIASYSLLT+MLA V GF+ GEFIH LGD H+Y NH Sbjct: 203 HPVPRLSCQLYQRSCDMGLGVPFNIASYSLLTIMLAHVCGFEPGEFIHCLGDTHVYCNHI 262 Query: 214 EQADLQLSRSPRTLPQMIINPN--------------------IVDLLSFRYEDFTLRSYE 253 + QL R+PR P++ I N + ++ +F YE + Y Sbjct: 263 DALQTQLERTPRPFPKIFIKRNDTGTQSSDTVESTAQKVARLVREMETFEYEHIDVVGYT 322 Query: 254 PHAAILAKVSV 264 PH I +SV Sbjct: 323 PHNKIAMDMSV 333 >gi|156345471|ref|XP_001621374.1| hypothetical protein NEMVEDRAFT_v1g145132 [Nematostella vectensis] gi|156207232|gb|EDO29274.1| predicted protein [Nematostella vectensis] Length = 210 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 120/210 (57%), Positives = 152/210 (72%) Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 ++ ELLWFLRGDSNV +L G +IW+EWA +DG+LGP+YGVQWR+WP DG IDQI+ Sbjct: 1 IILELLWFLRGDSNVRWLQERGCTIWNEWAREDGDLGPVYGVQWRNWPTPDGGHIDQIAE 60 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 +V+ L+++P SRR IVSAWNVA + +MAL PCH FQFYV +GKLSCQLYQRS D+FLG+ Sbjct: 61 VVKQLKSNPDSRRIIVSAWNVADLPQMALMPCHAFFQFYVADGKLSCQLYQRSADIFLGV 120 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 PFNIASY+LLT MLA Q G+F+ T GD H+YNNHF Q + QL+R P P + I Sbjct: 121 PFNIASYALLTHMLAQQCDLQVGDFVWTGGDCHIYNNHFAQVETQLARQPFAYPTLQIKR 180 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + YEDF + Y+ H I A V+V Sbjct: 181 RPDSIFGYEYEDFEVVGYQHHEPIKAPVAV 210 >gi|145248694|ref|XP_001400686.1| thymidylate synthase [Aspergillus niger CBS 513.88] gi|134081354|emb|CAK41856.1| unnamed protein product [Aspergillus niger] Length = 356 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 125/319 (39%), Positives = 171/319 (53%), Gaps = 56/319 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK--------------GFPLLT 46 HQYL+L+R ++ G R DRTG GTRS F QMRF LSK PLLT Sbjct: 38 HQYLNLIRRILSEGEHRPDRTGTGTRSIFAPPQMRFSLSKPSTNTTTGIKEYTPILPLLT 97 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L G+ IWD ++ G+LGP+Y Sbjct: 98 TKRVFLRAVLAELLWFISGTTSSLPLSEAGIKIWDGNGSREYLDKVGLSHREVGDLGPVY 157 Query: 95 GVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 G QWR + DY G +DQ++ +V+ L+ +P+ RR I+SAWN + MALPPC Sbjct: 158 GFQWRHFGAEYVDAKTDYSGQGVDQLAEVVKKLKENPFDRRIIMSAWNPKDMRIMALPPC 217 Query: 147 HCLFQFYVD------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 H QFYV G L C LYQRS D+ LG+PFNIASY+LLT +L Sbjct: 218 HMFAQFYVRFPDAKRDEEGVVRDGEWGRGHLDCLLYQRSADMGLGVPFNIASYALLTHLL 277 Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYE 245 A + G +HTLGD H+Y +H + Q+ R P P++ I + ++ E Sbjct: 278 AHAVDMVPGTLVHTLGDAHVYLDHVDALKEQIEREPVAFPEVRIKREDRGSGVVDGWKEE 337 Query: 246 DFTLRSYEPHAAILAKVSV 264 +F + Y+PH AI K+SV Sbjct: 338 EFEVIGYKPHKAIKMKMSV 356 >gi|322701545|gb|EFY93294.1| thymidylate synthase [Metarhizium acridum CQMa 102] Length = 335 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 119/315 (37%), Positives = 170/315 (53%), Gaps = 52/315 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56 +QYLDL+R +++ G R DRTG GT S F ++F L++ PLLTTK+V ++V+ Sbjct: 21 YQYLDLIREILEEGEQRFDRTGTGTISIFAPRPLKFSLNRDGAPILPLLTTKRVFLRAVI 80 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-- 102 ELLWF+ +++ L GV IWD ++G+LGP+YG QWR + Sbjct: 81 AELLWFIEANTSSKALSDVGVKIWDGNGSREFLDNLGLTHREEGDLGPVYGFQWRHFGAE 140 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154 DY G +DQ++ ++ L+ PY RR I+SAWN + MALPPCH QFYV Sbjct: 141 YVDAKTDYTGQGVDQLADVIDKLKNKPYDRRIIMSAWNARDLHLMALPPCHVFAQFYVSY 200 Query: 155 ------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 + G L CQLYQRS D+ LG+PFNIASY+LLT M+A Sbjct: 201 PSRRRRNGKPSSMETNGGPTSTAPEKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIAH 260 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTL 249 V G H +GD H+Y +H + ++QL R PR P++ I + ++ ED + Sbjct: 261 VCDLVPGSLTHVMGDAHVYADHEDALNIQLEREPRQFPEVEIARERGCGIDGWKVEDIIV 320 Query: 250 RSYEPHAAILAKVSV 264 + Y+PH I K++V Sbjct: 321 KGYDPHKTIAMKMAV 335 >gi|2833319|sp|Q23695|DRTS_CRIFA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|162494|gb|AAA30318.1| dihydrofolate reductase-thymidylate synthetase [Crithidia fasciculata] Length = 515 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 118/284 (41%), Positives = 164/284 (57%), Gaps = 23/284 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+L+ ++K G + DRTGVGT S FG QM PLLTTK+V W+ V EL+W Sbjct: 234 RQYLELIDRIMKTGLVKEDRTGVGTISLFGAQMFSLRDNQLPLLTTKRVFWRGVCEELIW 293 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-DYDG-- 106 FLRG++N L + IWD +K+ +LGP+YG QWR + DY G Sbjct: 294 FLRGETNAHVLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGFD 353 Query: 107 ----NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLS 160 +DQI +IV++L+ + RR +V+AWN + KMA+ PCH L QFYV+ +LS Sbjct: 354 ANYDEGVDQIKTIVETLKTN--DRRLLVTAWNPCALHKMAVRPCHLLGQFYVNTQTKELS 411 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQR D+ LG+PFNIASY+LLT+++A G + GE +HTLG H+Y+NH E QL Sbjct: 412 CMLYQRCCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGTAHVYSNHVEALKEQL 471 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P ++ L + D + Y P+ I +++V Sbjct: 472 QRVPVAFPVLVFKKEREFLEDYESTDMEVVDYVPYPPIKMEMAV 515 >gi|284156866|gb|ADB79636.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 478 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 122/257 (47%), Positives = 163/257 (63%), Gaps = 21/257 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMIINPNIV 237 R PR P ++ Sbjct: 461 KRVPRAFPYLVFRRERE 477 >gi|284156904|gb|ADB79655.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 477 Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 122/257 (47%), Positives = 163/257 (63%), Gaps = 21/257 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMIINPNIV 237 R PR P ++ Sbjct: 461 KRVPRAFPYLVFRRERE 477 >gi|284156914|gb|ADB79660.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 477 Score = 304 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 122/257 (47%), Positives = 163/257 (63%), Gaps = 21/257 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMIINPNIV 237 R PR P ++ Sbjct: 461 KRVPRAFPYLVFRRERE 477 >gi|284156912|gb|ADB79659.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 364 Score = 304 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 122/258 (47%), Positives = 163/258 (63%), Gaps = 21/258 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 107 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 166 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 167 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 226 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 227 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 286 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 287 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 346 Query: 221 SRSPRTLPQMIINPNIVD 238 R PR P ++ Sbjct: 347 KRVPRAFPYLVFRRERES 364 >gi|284156894|gb|ADB79650.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 477 Score = 304 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 122/257 (47%), Positives = 163/257 (63%), Gaps = 21/257 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMIINPNIV 237 R PR P ++ Sbjct: 461 KRVPRAFPYLVFRRERE 477 >gi|284156874|gb|ADB79640.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156878|gb|ADB79642.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156880|gb|ADB79643.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156902|gb|ADB79654.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156906|gb|ADB79656.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156910|gb|ADB79658.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156922|gb|ADB79664.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 476 Score = 304 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 122/255 (47%), Positives = 163/255 (63%), Gaps = 21/255 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMIINPN 235 R PR P ++ Sbjct: 461 KRVPRAFPYLVFRRE 475 >gi|284156876|gb|ADB79641.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156896|gb|ADB79651.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156898|gb|ADB79652.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 477 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 122/257 (47%), Positives = 163/257 (63%), Gaps = 21/257 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMIINPNIV 237 R PR P ++ Sbjct: 461 KRVPRAFPYLVFRRERE 477 >gi|322705675|gb|EFY97259.1| thymidylate synthase [Metarhizium anisopliae ARSEF 23] Length = 335 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 118/315 (37%), Positives = 170/315 (53%), Gaps = 52/315 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56 ++YLDL+R +++ G R DRTG GT S F ++F L++ PLLTTK+V ++V+ Sbjct: 21 YRYLDLIREILEEGEQRPDRTGTGTISIFAPRPLKFSLNQDGTPILPLLTTKRVFLRAVI 80 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-- 102 ELLWF+ +++ L GV IWD ++G+LGP+YG QWR + Sbjct: 81 AELLWFIEANTSSKALSDVGVKIWDGNGSREFLDNLGLTHREEGDLGPVYGFQWRHFGAE 140 Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154 DY G +DQ++ ++ L+ PY RR I+SAWN + MALPPCH QFYV Sbjct: 141 YVDAKTDYTGQGVDQLADVIDKLKNKPYDRRIIISAWNARDLHLMALPPCHVFAQFYVSY 200 Query: 155 ------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 + G L CQLYQRS D+ LG+PFNIASY+LLT M+A Sbjct: 201 PSRRRRNGMASSTETNGSATSTAPEKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIAH 260 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTL 249 V G H +GD H+Y +H + ++QL R PR P++ I + ++ ED + Sbjct: 261 VCDLVPGSLTHVMGDAHVYADHEDALNIQLEREPRQFPEVEIAREKGCGIDGWKVEDIIV 320 Query: 250 RSYEPHAAILAKVSV 264 + Y+PH I K++V Sbjct: 321 KGYDPHKTIAMKMAV 335 >gi|284156868|gb|ADB79637.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156870|gb|ADB79638.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156872|gb|ADB79639.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156882|gb|ADB79644.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156884|gb|ADB79645.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156886|gb|ADB79646.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156888|gb|ADB79647.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156890|gb|ADB79648.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156892|gb|ADB79649.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156900|gb|ADB79653.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156908|gb|ADB79657.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156918|gb|ADB79662.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156920|gb|ADB79663.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] gi|284156928|gb|ADB79667.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 476 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 122/255 (47%), Positives = 163/255 (63%), Gaps = 21/255 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMIINPN 235 R PR P ++ Sbjct: 461 KRVPRAFPYLVFRRE 475 >gi|66392008|ref|YP_238933.1| dTMP (thymidylate) synthase [Aeromonas phage 31] gi|62114845|gb|AAX63693.1| td [Aeromonas phage 31] Length = 279 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 125/281 (44%), Positives = 170/281 (60%), Gaps = 19/281 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+ VI G + DRTGVGTRS FG +RFDLSKGFP +T K++ WKSVV ELL Sbjct: 1 MIQYKDLVEDVIANGRRKTDRTGVGTRSVFGRMLRFDLSKGFPAVTCKQLAWKSVVGELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WF+ G +NV +L R +IWD ++ G LGP+YG QWR + + + Sbjct: 61 WFISGSTNVDHLRRITHGPNSDKRTIWDANYEEQAINLGYSGGYLGPVYGKQWRQFGNKN 120 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ+ ++ ++++P SRR +V AWN ID MALPPCH FQF V GKLS Q Sbjct: 121 --PVDQLQKVIDQIKSNPDSRRLLVVAWNPEDIDAMALPPCHFAFQFEVYEGKLSLMWSQ 178 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DV LG+PFNIASY+LL ++A + G + GE + + DVH+Y NH + RSPR Sbjct: 179 RSVDVGLGLPFNIASYALLVHIIAGICGLEVGELVFSGADVHVYENHVDDLVEIFCRSPR 238 Query: 226 TLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP++ N+ +L + +D+ L Y+PH I ++V Sbjct: 239 PLPKLAYYDVANLAELRTMTVDDYVLTEYDPHPPIKMPMAV 279 >gi|331242472|ref|XP_003333882.1| thymidylate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309312872|gb|EFP89463.1| thymidylate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 306 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 128/293 (43%), Positives = 177/293 (60%), Gaps = 30/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59 +QYL+L+RHVI G R DRTG GTRS F Q +RF LS PL+TTKKVH KS++HEL Sbjct: 14 YQYLNLIRHVIHHGQLRPDRTGTGTRSCFAPQQLRFTLSDSTLPLITTKKVHTKSIIHEL 73 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW------ 101 LWF+R ++ L GV IWD + G LGPIYG QWR + Sbjct: 74 LWFIRASTSTQDLSAAGVRIWDPNGSRSYLDSVGLKEYETGTLGPIYGFQWRHFGASYQG 133 Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155 DY G +DQ+ +++ S+ P RR I++AWN A + +MALPPCH + QFYV Sbjct: 134 PNHDYSGQGVDQLKNLIDSIINRPTDRRMILTAWNPAALHEMALPPCHMMCQFYVTLPDE 193 Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 +LS LYQRS D+ LG+PFNI SY+LL M+A V + E + LGD H+Y+NH Sbjct: 194 DHPKPRLSAILYQRSADLGLGLPFNITSYALLVHMIAQVTKTEPFELVIQLGDAHVYSNH 253 Query: 213 FEQA-DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++QL+R+P P++ +NP++ D+ F++EDF + Y PH + ++SV Sbjct: 254 IKPLSEVQLTRTPNPFPKIKLNPSVTDIDHFKFEDFQILDYSPHPRVEMEMSV 306 >gi|284156926|gb|ADB79666.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 477 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 122/255 (47%), Positives = 163/255 (63%), Gaps = 21/255 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 222 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 281 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 282 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 341 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 342 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 401 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 402 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 461 Query: 221 SRSPRTLPQMIINPN 235 R PR P ++ Sbjct: 462 KRVPRAFPYLVFRRE 476 >gi|289618154|emb|CBI55370.1| unnamed protein product [Sordaria macrospora] Length = 353 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 128/326 (39%), Positives = 166/326 (50%), Gaps = 63/326 (19%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-------------------- 40 +QYLDL+R + G R DRTG GT S F ++F LSK Sbjct: 28 YQYLDLVRQIFDEGELREDRTGTGTYSIFAPTPLKFALSKPSPSASGASADPSSPSYSFE 87 Query: 41 -GFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKD 87 PLLTTK+V K+V+ ELLWF+ ++ + L GV IWD K+ Sbjct: 88 PILPLLTTKRVFTKAVLLELLWFISASTSSTTLSSQGVKIWDGNGSRAFLDMLGLSHRKE 147 Query: 88 GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 G+LGP+YG QWR + DY G +DQ+ I+ +LR +PY RR I+SAWN + Sbjct: 148 GDLGPVYGFQWRHFGAEYVDAETDYTGQGVDQLQRIIDTLRTNPYDRRLILSAWNPKDMS 207 Query: 140 KMALPPCHCLFQFYVD--------------------NGKLSCQLYQRSGDVFLGIPFNIA 179 +M LPPCH QFYV G L CQLYQRS D+ LG+PFNIA Sbjct: 208 QMVLPPCHMFAQFYVSYPGSRERTRKEGEPTKQEKPKGHLHCQLYQRSCDMGLGVPFNIA 267 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV-D 238 SY+LLT MLA V G H +GD H+Y NH + QL R PR P + I Sbjct: 268 SYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQLEREPREFPTLEIKREKRGS 327 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 + ++ EDF ++ YEPH I ++SV Sbjct: 328 IDGWKAEDFVVKGYEPHKTIAMEMSV 353 >gi|284156916|gb|ADB79661.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 462 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 122/255 (47%), Positives = 163/255 (63%), Gaps = 21/255 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 207 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 266 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 267 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 326 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 327 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 386 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 387 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 446 Query: 221 SRSPRTLPQMIINPN 235 R PR P ++ Sbjct: 447 KRVPRAFPYLVFRRE 461 >gi|195941079|ref|ZP_03086461.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4024] Length = 206 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 128/206 (62%), Positives = 164/206 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNVAYLHENNVSIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDV 206 Y+LL M+A + G+F+ T GD Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDT 206 >gi|264685644|dbj|BAI49171.1| hypothetical protein [Bacillus phage phiNIT1] Length = 305 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 123/290 (42%), Positives = 177/290 (61%), Gaps = 29/290 (10%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +Y +L++ ++ G+ + DRTG GT S FG QM FDLSKGFP+LTTKK+ ++ + EL WF Sbjct: 7 EYFNLVKKIMDEGTFKDDRTGTGTLSLFGPQMEFDLSKGFPMLTTKKLPFRIIAEELFWF 66 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD---------------------GELGPIYGVQWRSW 101 + GD+++ L ++IW + A + +LGPIYG QWRSW Sbjct: 67 INGDTDLKTLLDKNINIWTDDAYRFYLDNGGSLTKSGFIQRTKNAGFDLGPIYGKQWRSW 126 Query: 102 P------DYDGNVI--DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 D G + DQ+ +++ + +P SRRHIVSAWNV ++ MALPPCH LFQFY Sbjct: 127 GGVVTVGDSMGYQMKHDQLFRVIKDISTNPDSRRHIVSAWNVGDLEYMALPPCHVLFQFY 186 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V NG LSC+LY RS D+FLG PFNIASY+LLT ++A + G + G+ I+++GD H+Y NH Sbjct: 187 VVNGTLSCKLYMRSNDIFLGAPFNIASYALLTHIIAKMTGLKVGKLIYSVGDAHIYVNHL 246 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 + Q+ R P+ +PQ+ + ++ + ED L Y+ H I K+S Sbjct: 247 DLLKSQMEREPKEMPQLEVKAVHENIEDYTLEDIVLTGYDAHPTIKGKLS 296 >gi|284156924|gb|ADB79665.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi] Length = 471 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL L+ +I+ G+ + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WFLRG++ L GV IWD+ ++ +LGP+YG QWR + Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160 +YDG +DQI +IV++L+ +P RR + +AWN + + +MALPPCH L QFYV NG+LS Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 C LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD H+Y+NH E + QL Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460 Query: 221 SRSPRTLPQMI 231 R PR P ++ Sbjct: 461 KRVPRAFPYLV 471 >gi|37651687|ref|NP_932561.1| Td [Aeromonas phage 44RR2.8t] gi|34732987|gb|AAQ81524.1| dTMP (thymidylate) synthase [Aeromonas phage 44RR2.8t] Length = 279 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 125/281 (44%), Positives = 170/281 (60%), Gaps = 19/281 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+ VI G + DRTGVGTRS FG +RFDLSKGFP +T K++ WKSVV ELL Sbjct: 1 MIQYKDLVEDVIANGRRKTDRTGVGTRSVFGRMLRFDLSKGFPAVTCKQLAWKSVVGELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WF+ G +NV +L R +IWD ++ DG LGP+YG QWR + + + Sbjct: 61 WFISGSTNVDHLRRITHGPNSDKRTIWDANYEEQAINLGYSDGYLGPVYGKQWRQFGNKN 120 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ+ ++ ++++P SRR +V AWN ID MALPPCH FQF V GKLS Q Sbjct: 121 --PVDQLQKVIDQIKSNPDSRRLLVVAWNPEDIDAMALPPCHFAFQFEVYEGKLSLMWSQ 178 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DV LG+PFNIASY+LL ++A + G + GE + + DVH+Y NH + R PR Sbjct: 179 RSVDVGLGLPFNIASYALLVHIIAGICGLEVGELVFSGADVHVYENHVDDLVEIFWRDPR 238 Query: 226 TLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LP++ N+ +L + +D+ L Y+PH I ++V Sbjct: 239 PLPKLAYYDVANLAELRTMTVDDYVLTEYDPHPPIKMPMAV 279 >gi|42685|emb|CAA27600.1| thyA (C-terminal) [Escherichia coli] Length = 202 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 117/202 (57%), Positives = 152/202 (75%) Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 1 LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 60 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 61 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 120 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A + G+F+ T GD HLY+NH +Q LQLSR PR LP++II + + Sbjct: 121 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 180 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R+EDF + Y+PH I A V++ Sbjct: 181 RFEDFEIEGYDPHPGIKAPVAI 202 >gi|32364179|gb|AAP80238.1| dTMP thymidylate synthase [Enterobacteria phage T2] gi|32709475|gb|AAP86756.1| thymidylate synthase [Enterobacteria phage T2H] gi|113951991|gb|ABI48931.1| Td [Enterobacteria phage T2H] Length = 286 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 122/291 (41%), Positives = 167/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DLSKGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLSKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L +Y H I K++V Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286 >gi|114768942|ref|ZP_01446568.1| thymidylate synthase [alpha proteobacterium HTCC2255] gi|114549859|gb|EAU52740.1| thymidylate synthase [alpha proteobacterium HTCC2255] Length = 292 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 132/293 (45%), Positives = 180/293 (61%), Gaps = 30/293 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L +++ G + DRTGVGT S FGYQ+RF+L +GFP +TTKK+ W+S+V ELL Sbjct: 1 MKQYLDALNYIMDNGEEVSDRTGVGTLSVFGYQIRFNLQEGFPAVTTKKLAWRSIVGELL 60 Query: 61 WFLRGDSNVSYLHR-----------HGVSIWDEWADKDG------------ELGPIYGVQ 97 WFL G ++ L H +IW AD G ELGP+YG Q Sbjct: 61 WFLEGSTDERRLAELTFNKDRTDLVHKKTIWTANADAQGAELGYENNDLIKELGPVYGHQ 120 Query: 98 WRSWPDYDGN---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154 WR + D + DQI ++ ++ +P SRR I+SAWN I++MALPPCH + QF V Sbjct: 121 WRHFDGTDKDISLSTDQIIWLINEIKNNPDSRRMILSAWNPNQINEMALPPCHTMAQFRV 180 Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 NGKLSCQLYQRS D+FLG+PFNIASYSLLT MLA + + G F+ GD H+Y NH + Sbjct: 181 MNGKLSCQLYQRSADMFLGVPFNIASYSLLTHMLAQLCDLKVGSFVWVGGDCHIYKNHKK 240 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKVSV 264 Q QL R+P++LP + + P+ +L R + L++Y+P +I A +++ Sbjct: 241 QVLEQLKRTPKSLPNLEM-PSFSNLDELLQTRPIGYVLKNYDPMDSIKAPMAI 292 >gi|83816568|ref|YP_444564.1| thymidylate synthase [Salinibacter ruber DSM 13855] gi|83757962|gb|ABC46075.1| thymidylate synthase [Salinibacter ruber DSM 13855] Length = 355 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 129/296 (43%), Positives = 174/296 (58%), Gaps = 34/296 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L+ ++ G+ DRTG GT FG Q+RFDL++GFPLLTTK+V + V ELL Sbjct: 62 MRQYLDYLQDILDHGTRHEDRTGTGTIRVFGRQLRFDLTEGFPLLTTKRVWMRGVTEELL 121 Query: 61 WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92 WFLRG++N+ L + VSIW D +A++ G+LGP Sbjct: 122 WFLRGETNIQSLVQADVSIWTDWPLQRYRDETGDEISQEAFEERIATDDAFAERWGDLGP 181 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR + +G +DQI +V+ LR P+SRRH+VSAW+ A I+ ALPPCH FQ Sbjct: 182 VYGTQWRDFEGPEGR-VDQIERLVRGLRETPHSRRHVVSAWHPAQIEDAALPPCHYAFQC 240 Query: 153 YVD----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 +V+ +G+LS QRS D FLG+PFNIASY+LLT MLA G E I GD H+ Sbjct: 241 FVEGEPGDGRLSLMWQQRSVDSFLGLPFNIASYALLTRMLAQQAGLTPHELIFNGGDCHI 300 Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Y NH EQ + QL+R+P P + + + +D T+ YE H A+ A ++V Sbjct: 301 YQNHVEQVEEQLTRTPYDRPTLRL-RQRDSIFEHAADDVTIEDYEHHPALTAPIAV 355 >gi|87199994|ref|YP_497251.1| thymidylate synthase [Novosphingobium aromaticivorans DSM 12444] gi|87135675|gb|ABD26417.1| thymidylate synthase [Novosphingobium aromaticivorans DSM 12444] Length = 316 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 127/301 (42%), Positives = 169/301 (56%), Gaps = 39/301 (12%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL+R + + G +R DRTGVGTRS FG ++RFDLS G PLLTTK+V+WK+ E LW Sbjct: 16 QYLDLMRRIWEHGDERVDRTGVGTRSVFGAELRFDLSDGRMPLLTTKRVYWKTATREFLW 75 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93 FL G++N+ L GV IW +W + G+LGP+ Sbjct: 76 FLTGNTNIRPLCAQGVEIWTDWPLDRYRKETGDDISRKDFSARIVADEAFALRWGDLGPV 135 Query: 94 YGVQWRSWP----------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 YG QW WP ++Q++ +V SLR +P SRRHI+ WNVA ID+MAL Sbjct: 136 YGKQWVDWPVFEPVGDGLFRRREAGVNQVADVVDSLRHNPGSRRHIIEGWNVAEIDRMAL 195 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 PPCH +QF+V +L+ LYQRS DV LG+PFN+ +LL +LA Q GE + Sbjct: 196 PPCHKTYQFHVSGNRLNGLLYQRSCDVALGLPFNLWGAALLVRLLAQQCDLQPGELVWMG 255 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 GD HLY NH + + QLSR P P++ I + +R EDF + Y P + A V+ Sbjct: 256 GDTHLYLNHADLVEAQLSREPEGDPRLAILRRPDSIFGYRIEDFEVTGYAPQGHLSAPVA 315 Query: 264 V 264 V Sbjct: 316 V 316 >gi|294506312|ref|YP_003570370.1| thymidylate synthase [Salinibacter ruber M8] gi|294342640|emb|CBH23418.1| thymidylate synthase [Salinibacter ruber M8] Length = 294 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 129/296 (43%), Positives = 174/296 (58%), Gaps = 34/296 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD L+ ++ G+ DRTG GT FG Q+RFDL++GFPLLTTK+V + V ELL Sbjct: 1 MRQYLDYLQDILDHGTRHEDRTGTGTIRVFGRQLRFDLTEGFPLLTTKRVWMRGVTEELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92 WFLRG++N+ L + GVSIW D +A++ G+LGP Sbjct: 61 WFLRGETNIQSLVQAGVSIWTDWPLQRYRDETGDEISQEAFEERIATDDAFAEQWGDLGP 120 Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 +YG QWR + +G +DQI +V+ LR P+SRRH+VSAW+ A I+ ALPPCH FQ Sbjct: 121 VYGTQWRDFEGPEGR-VDQIERLVRGLRETPHSRRHVVSAWHPAQIEDAALPPCHYAFQC 179 Query: 153 YVD----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 +V+ +G+LS QRS D FLG+PFNIASY+LLT MLA G E I GD H+ Sbjct: 180 FVEGEPGDGRLSLMWQQRSVDSFLGLPFNIASYALLTRMLAQQAGLTPHELIFNGGDCHI 239 Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Y NH EQ + QL+R+P P + + + +D + YE H A+ A ++V Sbjct: 240 YQNHVEQVEEQLTRTPYDRPTLRL-RQRDSIFEHAADDVAIEDYEHHPALTAPIAV 294 >gi|224471862|sp|Q2G6V6|TYSY_NOVAD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 314 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 127/301 (42%), Positives = 169/301 (56%), Gaps = 39/301 (12%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL+R + + G +R DRTGVGTRS FG ++RFDLS G PLLTTK+V+WK+ E LW Sbjct: 14 QYLDLMRRIWEHGDERVDRTGVGTRSVFGAELRFDLSDGRMPLLTTKRVYWKTATREFLW 73 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93 FL G++N+ L GV IW +W + G+LGP+ Sbjct: 74 FLTGNTNIRPLCAQGVEIWTDWPLDRYRKETGDDISRKDFSARIVADEAFALRWGDLGPV 133 Query: 94 YGVQWRSWP----------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 YG QW WP ++Q++ +V SLR +P SRRHI+ WNVA ID+MAL Sbjct: 134 YGKQWVDWPVFEPVGDGLFRRREAGVNQVADVVDSLRHNPGSRRHIIEGWNVAEIDRMAL 193 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 PPCH +QF+V +L+ LYQRS DV LG+PFN+ +LL +LA Q GE + Sbjct: 194 PPCHKTYQFHVSGNRLNGLLYQRSCDVALGLPFNLWGAALLVRLLAQQCDLQPGELVWMG 253 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 GD HLY NH + + QLSR P P++ I + +R EDF + Y P + A V+ Sbjct: 254 GDTHLYLNHADLVEAQLSREPEGDPRLAILRRPDSIFGYRIEDFEVTGYAPQGHLSAPVA 313 Query: 264 V 264 V Sbjct: 314 V 314 >gi|15078937|ref|NP_149688.1| 225R [Invertebrate iridescent virus 6] gi|82039411|sp|Q9WBI3|TYSY_IIV6 RecName: Full=Probable thymidylate synthase 225R gi|4494906|gb|AAD21329.1| 225R [Invertebrate iridescent virus 6] Length = 295 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 126/287 (43%), Positives = 178/287 (62%), Gaps = 25/287 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+LL V+ G DR DRTG+GT++ FG Q++F+L FPLLTTKKV WK VV ELLW Sbjct: 8 KQYLNLLEKVLFQGEDRDDRTGIGTKNVFGEQLKFNLRTSFPLLTTKKVFWKGVVEELLW 67 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP------DYDG 106 F+ G ++VS L++ GV IW++ A+ K +LGPIYG QWR + D Sbjct: 68 FISGSTDVSVLNQKGVKIWNKNAESFYTQQNLFKKNDLGPIYGFQWRHYGENYIGCDNKY 127 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-----NGKLSC 161 IDQ+ +I+ +++ +P+ RR I+ AWN KMALPPCHC+ F V +LSC Sbjct: 128 GGIDQLKNIITTIQNEPWDRRMILLAWNPKDNSKMALPPCHCIAHFDVSSKINGKRELSC 187 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIG-----FQYGEFIHTLGDVHLYNNHFEQA 216 L+QRS D+ LG+PFNIASY+LLT ++A V G+F+HTL +VH+Y NH + Sbjct: 188 HLFQRSADMGLGVPFNIASYALLTHIIAHVSSTNTELIVPGDFVHTLSNVHIYKNHIKAL 247 Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 Q+SR PR P + I ++ +F +DF L+ Y P+ A+ +++ Sbjct: 248 TEQISRIPRKFPTLEIINKNKNIDAFSSKDFVLKDYNPYPALEMEMA 294 >gi|9631429|ref|NP_048309.1| ORF MSV238 putative thymidylate synthase, similar to Arabidopsis thaliana GB:L08594 [Melanoplus sanguinipes entomopoxvirus] gi|4049782|gb|AAC97742.1| ORF MSV238 putative thymidylate synthase, similar to Arabidopsis thaliana GB:L08594 [Melanoplus sanguinipes entomopoxvirus] Length = 292 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 109/284 (38%), Positives = 164/284 (57%), Gaps = 21/284 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL + ++ G ++RTGV T++ +G M++ L FPL TTK + W+ +V ELLW Sbjct: 9 YQYLKGISEILSNGRITKNRTGVDTKTVYGLTMKYKLDDSFPLFTTKSMFWRGIVEELLW 68 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 F+ G +N + L G+ IWDE K+G+LGP+YG QWR + Sbjct: 69 FISGSTNTNILKNKGIHIWDENGSLKYIKKRGFNDRKEGDLGPVYGFQWRHFGAKYIDMD 128 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LS 160 +Y DQ++ I+ ++ P SR I++AWN ++ M +PPCHC QF+V N K L+ Sbjct: 129 TNYTNQGFDQLTHIINKIKNKPESRNIILTAWNPIDVENMVIPPCHCFVQFHVINNKYLT 188 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQ+YQRS D+ LG+PFN+ASYSLLT M+A + + EFIH +G+ H+Y NH QL Sbjct: 189 CQMYQRSADMGLGVPFNVASYSLLTYMIAHLTNLKPYEFIHNIGNAHIYVNHINGLKKQL 248 Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R+P P++ I + ++ F+++DF L Y I + V Sbjct: 249 ERTPNPFPKLKIKRQVDNIDDFKFDDFELIDYNHLGKIKLDMVV 292 >gi|323941564|gb|EGB37745.1| thymidylate synthase [Escherichia coli E482] Length = 219 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 124/204 (60%), Positives = 161/204 (78%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLG 204 Y+LL M+A + G+F+ T Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGA 204 >gi|321468900|gb|EFX79883.1| hypothetical protein DAPPUDRAFT_319193 [Daphnia pulex] Length = 255 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 116/243 (47%), Positives = 154/243 (63%), Gaps = 20/243 (8%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGE 89 FPLLTTK+V W+ ++ ELLWF+RG +N + L + IWD + ++G Sbjct: 13 FPLLTTKRVFWRGLMEELLWFVRGSTNANKLREKDIHIWDGNSSREFLDSLGLKDREEGG 72 Query: 90 LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGPIYG QWR + DY +DQ+ +++ ++R +P RR I++AWN + + M Sbjct: 73 LGPIYGFQWRHFGANYDNMHSDYSCQGVDQLKNLINTIRTNPDDRRMILTAWNPSALPLM 132 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201 ALPPCHCL QFYV NG+LSCQ+YQRS DV LG+PFNIASYSLLT M+A V G GEFIH Sbjct: 133 ALPPCHCLAQFYVANGELSCQMYQRSADVGLGVPFNIASYSLLTCMIARVTGLNPGEFIH 192 Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 TLGD H+YNNH + QL R PR P + I + D+ F+ +DF L Y+PH I Sbjct: 193 TLGDAHVYNNHISALEKQLERQPRPFPTLKIIRKVSDIDDFKADDFVLEGYDPHPKIPMD 252 Query: 262 VSV 264 ++V Sbjct: 253 MAV 255 >gi|294661477|ref|YP_003579930.1| Td thymidylate synthetase [Klebsiella phage KP15] gi|292660638|gb|ADE34886.1| Td thymidylate synthetase [Klebsiella phage KP15] Length = 291 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 132/292 (45%), Positives = 176/292 (60%), Gaps = 29/292 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD+++ V+ G + DRTGVGT FG Q R+DL++GFP T KK+ +K HEL Sbjct: 1 MKQYLDIIKLVLDNGVESTDRTGVGTIRIFGAQARWDLNRGFPATTCKKLFFKPCKHELQ 60 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWADKD--------GELGPIYGVQWRSWPD-- 103 WFL G +NV L R +IWD+ +K G LGPIYG QWRS+ Sbjct: 61 WFLSGSTNVEELRRMTWGENSDKRTIWDDNYEKQAIDLGYDSGYLGPIYGHQWRSFGSLY 120 Query: 104 ------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 Y G+ +DQI+ +++ L++ P R IVSAWN +D MAL PCHC FQF V NG Sbjct: 121 GDDDSYYGGSGVDQIAKVIEQLKSTPDDRGIIVSAWNPVDLDDMALRPCHCFFQFVVING 180 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 KLS Q YQRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N EQA Sbjct: 181 KLSLQWYQRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAVEQAK 240 Query: 218 LQLS--RSPRTLPQMIINPNIVDLLSFR---YEDFTLRSYEPHAAILAKVSV 264 L RSP LP + + P + LL ++ TL Y H ++ A+++V Sbjct: 241 ELLQPNRSPMPLPILKM-PKVNSLLDLDQEFFDSITLEGYHNHGSLKAEMAV 291 >gi|312262725|gb|ADQ53020.1| Td thymidylate synthetase [Aeromonas phage PX29] Length = 277 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 123/282 (43%), Positives = 171/282 (60%), Gaps = 23/282 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLD++++VI+ G D DRTGVGTRS G R D++ GFP +TTK + WK+V ELL Sbjct: 1 MKYYLDIMKYVIENGEDEMDRTGVGTRSILGQVFRHDMADGFPAVTTKTLAWKAVRGELL 60 Query: 61 WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WF+ G +NV L +GV +IWD+ + DG+LGP+YG QWR + Sbjct: 61 WFMNGFTNVEVLRAMTYGVGSSTKTIWDDNFNHQGVALGYTDGDLGPVYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 N +DQ++ ++ ++ +P RR+IV AWN A +DKMALPPCH LF+F V G+L+ YQ Sbjct: 117 -NGVDQLAKAIERIKTNPECRRNIVCAWNPADLDKMALPPCHVLFRFSVKRGRLNLTWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D+ LGIPFNIASY LL M+A + G++ G D H+Y+NHF+Q QL R P Sbjct: 176 RSCDLLLGIPFNIASYGLLLEMVAHITGYKAGILTGMFDDAHIYHNHFDQVQEQLQRVPY 235 Query: 226 TLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264 LP+++ L +D L Y+ H+AI A ++V Sbjct: 236 DLPKLVFKKRFTTLEEACNLSLDDIQLEDYKCHSAIKAPMAV 277 >gi|103486818|ref|YP_616379.1| thymidylate synthase [Sphingopyxis alaskensis RB2256] gi|98976895|gb|ABF53046.1| thymidylate synthase [Sphingopyxis alaskensis RB2256] Length = 320 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 132/302 (43%), Positives = 174/302 (57%), Gaps = 40/302 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61 QYLDL+R + G +R DRTGVGTRS FG MRF L PLLTTK+V+WK+ + ELLW Sbjct: 19 QYLDLMRRIWVDGDERVDRTGVGTRSLFGETMRFSLKDDAIPLLTTKRVYWKTALRELLW 78 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93 FL GD+N+ L GV IW +W K G+LGP+ Sbjct: 79 FLTGDTNIRPLVAQGVKIWTDWPLEKYRKATGEAISATDFEARIVADADFAAKWGDLGPV 138 Query: 94 YGVQWRSWPDYD----------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 YG QW +WP Y+ + +QI++++ SL+ +P SRRHI + WNVA +D+MAL Sbjct: 139 YGHQWVNWPRYEPAGGGLFRRADHGYNQIAALIDSLKNNPGSRRHIFTGWNVADLDRMAL 198 Query: 144 PPCHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 PPCH +QF+V +G LSC L+QRS D+ LG FNI +LLT M+A G E + T Sbjct: 199 PPCHMTYQFHVRSDGGLSCLLFQRSCDLGLGFAFNIFEAALLTRMVAEQCGLYAHEVVWT 258 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 GDVHLY NH E + QL+R P P++ I + +R+EDF + Y P A I A V Sbjct: 259 GGDVHLYLNHAELVEQQLARVPEGKPRLRILRRPPSIFEYRFEDFVVEDYAPQAHISAPV 318 Query: 263 SV 264 +V Sbjct: 319 AV 320 >gi|294011284|ref|YP_003544744.1| thymidylate synthase [Sphingobium japonicum UT26S] gi|292674614|dbj|BAI96132.1| thymidylate synthase [Sphingobium japonicum UT26S] Length = 311 Score = 297 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 125/302 (41%), Positives = 167/302 (55%), Gaps = 39/302 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL+RH+ G +R DRTGVGTRS G MRF L+ PLLTTK+V+WK E+L Sbjct: 10 QQYLDLMRHIWLHGDERIDRTGVGTRSILGATMRFSLADDAVPLLTTKRVYWKVAAREML 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL GD+N+ L R GV IW +W + G+LGP Sbjct: 70 WFLTGDTNIRELVRQGVHIWTDWPLDSYRKATGEEIDRDAFEARIVEDQAFAARWGDLGP 129 Query: 93 IYGVQWRSWPDYDG----------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 +YG QW +WP Y+ +QI+ +V+++R P SRR + + WNVA + +MA Sbjct: 130 VYGAQWVNWPRYEEVGDGLYRRAAQGHNQIADLVEAIRTSPGSRRLLFTGWNVAEVSRMA 189 Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 LPPCH +QF V NG+L+ L+QRS D+ LG FNI S++T MLA + GE + Sbjct: 190 LPPCHMTYQFQVANGRLNGLLFQRSCDLGLGFAFNIFGLSMITRMLAQQCDLEAGEIVWQ 249 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 GDVHLY NH E + Q+ R P P++ IN + +R EDF + Y P I A V Sbjct: 250 GGDVHLYLNHAELVEEQIGRIPSGSPKLRINRRPSSIFDYRIEDFEVADYAPQRHIAAPV 309 Query: 263 SV 264 +V Sbjct: 310 AV 311 >gi|310722567|ref|YP_003969390.1| dTMP synthase [Aeromonas phage phiAS5] gi|306021410|gb|ADM79944.1| dTMP synthase [Aeromonas phage phiAS5] Length = 277 Score = 297 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 123/282 (43%), Positives = 170/282 (60%), Gaps = 23/282 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL++ ++ G D DRTGVGTRS G ++FD++ GFP TTK + WK+V ELL Sbjct: 1 MKNYQDLMQDILTHGVDEMDRTGVGTRSVVGRMIQFDMADGFPATTTKTLAWKAVRGELL 60 Query: 61 WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WF+ G +NV L +GV +IWD+ + DGELGP+YG QWR + Sbjct: 61 WFMNGFTNVETLRTMTYGVGSSTKTIWDDNFNNQGVALGYTDGELGPVYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 N +DQ++ ++ ++ +P RR+IVSAWN + MALPPCH LF+F V G+L+ YQ Sbjct: 117 -NGVDQLAKAIERIKTNPECRRNIVSAWNPVDLPHMALPPCHVLFRFSVKAGRLNLTWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D FLG+ FNIASY LL ++A + G++ G L DVH+YNNHFEQ QLSR P Sbjct: 176 RSVDTFLGLAFNIASYGLLLEIVAKITGYKAGLLTGMLDDVHVYNNHFEQVREQLSREPY 235 Query: 226 TLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264 LP+++ + L +D L Y+ H+AI A ++V Sbjct: 236 ELPKLVFKKDFTTLEEACNLSVDDIQLEDYKCHSAIKAPMAV 277 >gi|32709473|gb|AAP86755.1| thymidylate synthase [Enterobacteria phage RB3] Length = 286 Score = 297 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 121/291 (41%), Positives = 168/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DLSKGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLSKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L+ Y+ H + K++V Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286 >gi|32453722|ref|NP_861931.1| dTMP (thymidylate) synthase [Enterobacteria phage RB69] gi|32350541|gb|AAP76140.1| dTMP (thymidylate) synthase [Enterobacteria phage RB69] Length = 286 Score = 297 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 123/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L+ +++ G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQYLINDILENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WF+ G +NV+ L G +IWD+ + GELGPIYG QWR + Sbjct: 61 WFMSGSTNVNDLRIRTHGSLIEGKTIWDDNYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ+ + ++A P RR IVSAWN A ID+MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQLVKTIDRIKALPNDRRQIVSAWNPAEIDQMALPPCHMFYQFNVRNGHLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ LT ++A + G+ + + G+ H+Y+NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCKEVLRREPK 235 Query: 226 TLPQMIIN--------PNIVDLL----SFRYEDFTLRSYEPHAAILAKVSV 264 L + IN P + + + + DF L++YE H I AK++V Sbjct: 236 ELCSLEINWPSNFENWPTKIQMDWVTGTMTHSDFVLKNYESHPTIKAKMAV 286 >gi|304404471|ref|ZP_07386132.1| thymidylate synthase [Paenibacillus curdlanolyticus YK9] gi|304346278|gb|EFM12111.1| thymidylate synthase [Paenibacillus curdlanolyticus YK9] Length = 281 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 124/281 (44%), Positives = 170/281 (60%), Gaps = 50/281 (17%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK------- 86 MRFDL++GFPLLTTK++ ++ +V ELLWF++GD+N+ YL +H +IW+EWA K Sbjct: 1 MRFDLNEGFPLLTTKRIPFRLIVSELLWFMKGDTNIRYLLQHNNNIWNEWAFKRWVESAS 60 Query: 87 -------------------------------------------DGELGPIYGVQWRSWPD 103 GELG +YG QWR+W Sbjct: 61 YEGPDMANFGLRSQTDEDFAASYTEQMNRFKELVLTDDAFAAQFGELGDVYGKQWRAWQT 120 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 G+ +DQ+ +++ ++ +P SRR IVSAWN I MALPPCH LFQFYV +GKLSCQL Sbjct: 121 TKGDTLDQLHDVIEMIKRNPDSRRLIVSAWNPEDIPLMALPPCHTLFQFYVADGKLSCQL 180 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+FLGIPFNIASY+LLT ++A G GEF+HTLGD H+Y NH +Q QL+R+ Sbjct: 181 YQRSADIFLGIPFNIASYALLTHLIARECGLAVGEFVHTLGDAHIYTNHMDQIQEQLARA 240 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P++LP++ ++ + + ED + Y+PH I A V+V Sbjct: 241 PKSLPKLELSGDWTSVFDAEVEDIAVEGYDPHPTIKAPVAV 281 >gi|213650267|ref|ZP_03380320.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|323222587|gb|EGA06952.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 202 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 116/202 (57%), Positives = 151/202 (74%) Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 ++GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ D Sbjct: 1 MQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLKND 60 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 61 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 120 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L + Sbjct: 121 LLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDY 180 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R++DF + Y+PH I A V++ Sbjct: 181 RFDDFEIEGYDPHPGIKAPVAI 202 >gi|224471864|sp|Q1GTH6|TYSY_SPHAL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 311 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 132/302 (43%), Positives = 174/302 (57%), Gaps = 40/302 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61 QYLDL+R + G +R DRTGVGTRS FG MRF L PLLTTK+V+WK+ + ELLW Sbjct: 10 QYLDLMRRIWVDGDERVDRTGVGTRSLFGETMRFSLKDDAIPLLTTKRVYWKTALRELLW 69 Query: 62 FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93 FL GD+N+ L GV IW +W K G+LGP+ Sbjct: 70 FLTGDTNIRPLVAQGVKIWTDWPLEKYRKATGEAISATDFEARIVADADFAAKWGDLGPV 129 Query: 94 YGVQWRSWPDYD----------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 YG QW +WP Y+ + +QI++++ SL+ +P SRRHI + WNVA +D+MAL Sbjct: 130 YGHQWVNWPRYEPAGGGLFRRADHGYNQIAALIDSLKNNPGSRRHIFTGWNVADLDRMAL 189 Query: 144 PPCHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 PPCH +QF+V +G LSC L+QRS D+ LG FNI +LLT M+A G E + T Sbjct: 190 PPCHMTYQFHVRSDGGLSCLLFQRSCDLGLGFAFNIFEAALLTRMVAEQCGLYAHEVVWT 249 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 GDVHLY NH E + QL+R P P++ I + +R+EDF + Y P A I A V Sbjct: 250 GGDVHLYLNHAELVEQQLARVPEGKPRLRILRRPPSIFEYRFEDFVVEDYAPQAHISAPV 309 Query: 263 SV 264 +V Sbjct: 310 AV 311 >gi|3033367|gb|AAC12816.1| thymidylate synthase [Enterobacteria phage T4] gi|299780595|gb|ADJ39957.1| dTMP (thymidylate) synthase [Enterobacteria phage T4T] Length = 286 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 120/291 (41%), Positives = 167/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L +Y H I K++V Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286 >gi|9632831|ref|NP_049848.1| dTMP (thymidylate) synthase [Enterobacteria phage T4] gi|136606|sp|P00471|TYSY_BPT4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157833959|pdb|1TIS|A Chain A, Crystal Structure Of Thymidylate Synthase From T4 Phage gi|5354455|gb|AAD42662.1|AF158101_249 dTMP (thymidylate) synthase [Enterobacteria phage T4] gi|215853|gb|AAA32492.1| thymidylate synthase [Enterobacteria phage T4] Length = 286 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 120/291 (41%), Positives = 167/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGSKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L +Y H I K++V Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286 >gi|302876686|ref|YP_003845319.1| thymidylate synthase [Clostridium cellulovorans 743B] gi|307687361|ref|ZP_07629807.1| thymidylate synthase [Clostridium cellulovorans 743B] gi|302579543|gb|ADL53555.1| thymidylate synthase [Clostridium cellulovorans 743B] Length = 263 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 104/266 (39%), Positives = 153/266 (57%), Gaps = 11/266 (4%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLD+++ ++ G ++RTGV T +F+L K FP+LTTK V +K+ V ELLW Sbjct: 6 KQYLDIVQDILDNGYYDQNRTGVATYKLPHKVFQFNLEKEFPILTTKFVAFKTAVKELLW 65 Query: 62 FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 + SN V L VSIWDEW +DG +G YG Q + QI ++++L+ Sbjct: 66 IYKDQSNDVRKLQEQNVSIWDEWMLEDGTIGKAYGYQVAKYK--------QIDKLIEALK 117 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 +P RR +++ WN+ + MAL PC L + V +G+L+C L QRSGD+ LG+PFN+A Sbjct: 118 DNPQDRRMMINLWNIDDLKDMALQPCCFLTLWDVTDGRLNCMLVQRSGDIPLGVPFNMAQ 177 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVD 238 Y++L ++A V G + G F H + + H+Y N E LQL+R P++ INP I + Sbjct: 178 YAVLVHLIAQVTGLKPGLFTHVINNAHIYENQVEGMKLQLTRREEAYDAPKIWINPEIKN 237 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 F+ ED L Y+ H I +VSV Sbjct: 238 FYDFKPEDIKLEGYQHHPVIKMEVSV 263 >gi|32709465|gb|AAP86751.1| thymidylate synthase [Enterobacteria phage LZ2] Length = 286 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 120/291 (41%), Positives = 168/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L+ Y+ H + K++V Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286 >gi|282174112|ref|YP_003358214.1| ORF75 [Anguillid herpesvirus 1] gi|281308955|gb|ADA57838.1| ORF75 [Anguillid herpesvirus 1] Length = 301 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 119/296 (40%), Positives = 176/296 (59%), Gaps = 35/296 (11%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGT-RSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 Y++ ++ ++ G +RRDRT VG+ FG+ R++L +GFPL TTK+V W++V EL+WF Sbjct: 6 YIEHVKSILTDGVERRDRTSVGSSLVKFGHMGRYNLRRGFPLFTTKRVFWRAVAEELIWF 65 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 L+G ++ L GV+IW + ++ +LGP+YG QWR W Sbjct: 66 LKGCTDGVKLAEKGVNIWRDNGTRSFLDSRGLTDHREHDLGPVYGFQWRHWGASYVGADA 125 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------- 155 +Y G DQI SI+ +L+A +RR ++SAWNV+ + KMALPPCH QF++D Sbjct: 126 EYSGQGHDQIQSILSNLKARNNNRRLLLSAWNVSDVPKMALPPCHLFAQFHIDFPAGYQH 185 Query: 156 -------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 +LSC YQRS D+ LG+PFN+ASY+LLT ++A + + GE IH++GD H+ Sbjct: 186 GTITETIKPRLSCLFYQRSADMGLGVPFNVASYALLTHIMAHLADLEVGELIHSIGDAHI 245 Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Y NH Q +LQ+ R R PQ+ INP + L +ED T+ Y PH I +++V Sbjct: 246 YTNHVAQLELQVKREIRPPPQLTINPRVKSLEDLTFEDLTITGYNPHPTIKMEMAV 301 >gi|32709471|gb|AAP86754.1| thymidylate synthase [Enterobacteria phage RB27] Length = 286 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 121/291 (41%), Positives = 168/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI +V ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHVFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L+ Y+ H + K++V Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286 >gi|291290454|dbj|BAI83249.1| dTMP (thymidylate) synthase [Enterobacteria phage AR1] Length = 286 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 121/291 (41%), Positives = 168/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI +V ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235 Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +++I + +L R +DF L+ Y+ H + K++V Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286 >gi|72073194|ref|XP_797720.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115944415|ref|XP_001195886.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 309 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 124/266 (46%), Positives = 163/266 (61%), Gaps = 31/266 (11%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDL+RH+ G + DRTG GT+S FG Q R++L FPLLTTK+V W+ V ELLWF Sbjct: 46 QYLDLIRHIQAHGHVKGDRTGTGTKSIFGAQSRYNLRDQFPLLTTKRVFWRGVAEELLWF 105 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N + L + IWD KD G+LGP+YG QWR + Sbjct: 106 VKGCTNATELQDKKIHIWDANGSKDFLEKRGLGHYEEGDLGPVYGFQWRHFGAEYKDRFT 165 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+++++++++ +P RR I+SAWN + KMALPPCH QFYV NG+LSCQ Sbjct: 166 DYTGQGVDQLANVIETIKNNPDDRRIIMSAWNPPDLPKMALPPCHAFVQFYVCNGELSCQ 225 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASYSLLT M+A V G + G+F+HTLGD H+Y NH E Q+S Sbjct: 226 LYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGDFVHTLGDAHVYLNHIEPLKEQVS- 284 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFT 248 + F DF Sbjct: 285 ----------DWEYKTSYGFERNDFV 300 >gi|330859629|emb|CBX69968.1| thymidylate synthase [Yersinia enterocolitica W22703] Length = 219 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 127/210 (60%), Positives = 160/210 (76%), Gaps = 1/210 (0%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL GD+N+ YL + VSIWDEWAD++G+LGP+YG QWR+W DG IDQ+S +VQ L+ Sbjct: 61 WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +D+MAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 Y+LL M+A G+F+ T G + Y Sbjct: 181 YALLVHMMAQQCDLAVGDFVWT-GAIRTYT 209 >gi|66391514|ref|YP_239039.1| Td thymidylate synthetase [Enterobacteria phage RB43] gi|62288602|gb|AAX78585.1| Td thymidylate synthetase [Enterobacteria phage RB43] Length = 285 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 129/286 (45%), Positives = 171/286 (59%), Gaps = 23/286 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++R V+ G + DRTGVGT FG Q R++L++GFP T+K++ +K HEL Sbjct: 1 MKQYLDIIRLVLANGVESTDRTGVGTIRIFGAQTRWNLAEGFPATTSKQLFFKPCKHELQ 60 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWADK--------DGELGPIYGVQWRSWPD-- 103 WFL G +NV L +IWD+ + G LGPIYG QWRS+ Sbjct: 61 WFLSGSTNVDELREMTWGIGSDKRTIWDDNYENQAKSLGYSHGYLGPIYGHQWRSFGGDL 120 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y + +DQI+ IV L+ P R IVSAWN +DKMAL PCHC FQF V NGKLS Q Sbjct: 121 YGNHSVDQIARIVNELKTTPDDRGIIVSAWNPVDLDKMALRPCHCFFQFVVINGKLSLQW 180 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-- 221 YQRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N EQA L Sbjct: 181 YQRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAIEQAKELLKPE 240 Query: 222 RSPRTLPQMIINPNIVDLLSFR---YEDFTLRSYEPHAAILAKVSV 264 R P LP + + P + LL ++ L+ Y H ++ A ++V Sbjct: 241 REPLPLPTLYM-PKVNSLLDLDQEFFDSIHLKDYNHHGSLKAAMAV 285 >gi|71013081|ref|XP_758554.1| hypothetical protein UM02407.1 [Ustilago maydis 521] gi|46098212|gb|EAK83445.1| hypothetical protein UM02407.1 [Ustilago maydis 521] Length = 554 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 122/295 (41%), Positives = 173/295 (58%), Gaps = 33/295 (11%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ--MRFDLSKGF-PLLTTKKVHWKSVVHEL 59 QYL+L++ VI G R DRTG GT + F Q +RFDL+ G PLLTTK+V ++ V+ EL Sbjct: 260 QYLELVQRVISTGESRPDRTGTGTLALFAPQPSLRFDLTNGTLPLLTTKRVFFRGVLEEL 319 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102 LWF+ G ++ L V IWD ++G+LGP+YG QWR + Sbjct: 320 LWFVGGKTDAKLLTEKSVHIWDGNGSRAFLDSRGLSHRREGDLGPVYGFQWRHFGATYKD 379 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--- 156 DY G +DQ++S++ +R +P RR ++SAWN A ++ MALPPCH QF+V N Sbjct: 380 CDTDYAGQGVDQLASVIDKIRNNPTDRRILLSAWNPADLELMALPPCHMFAQFFVSNLDA 439 Query: 157 -------GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 LSCQ+YQRS D+ LG+PFNIASY+LLT M+A V + E I +GD H+Y Sbjct: 440 YSKGQGKKHLSCQMYQRSCDLGLGVPFNIASYALLTYMIAKVTDCEPKELILAMGDAHVY 499 Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +H + QL R P P++ I ++ D+ F ++DF ++ Y+ H I K+SV Sbjct: 500 KDHVQPLKAQLERDPLPFPKLKIERDVKDIDDFTFDDFVVQGYKCHGKIDMKMSV 554 >gi|38640245|ref|NP_944201.1| dTMP synthase [Aeromonas phage Aeh1] gi|33414930|gb|AAQ17973.1| dTMP synthase [Aeromonas phage Aeh1] Length = 277 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 121/282 (42%), Positives = 165/282 (58%), Gaps = 23/282 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YLD++ + + G D DRTGVGTRS G R D++ GFP +TTK + WK+V E L Sbjct: 1 MKAYLDIINYTFENGEDEMDRTGVGTRSVLGQVFRHDMADGFPAVTTKTLAWKAVRGECL 60 Query: 61 WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WF+ G +NV L +GV +IWD+ + DGELGP+YG QWR + Sbjct: 61 WFMNGFTNVEVLRAMTYGVGSSSKTIWDDNFNHQGVALGYTDGELGPVYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 N +DQ++ ++ ++ +P RR+IV AWN +DKMALPPCH LF+F V G+L+ YQ Sbjct: 117 -NGVDQLAKAIERIKTNPECRRNIVCAWNPVDLDKMALPPCHVLFRFSVKRGRLNLTWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D FLG+PFNIASY LL ++A + G++ G L D H+Y+NHFEQ QL R P Sbjct: 176 RSVDTFLGLPFNIASYGLLLEIVAQITGYKAGILTGMLDDTHIYHNHFEQVQEQLQREPH 235 Query: 226 TLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264 LP + L +D L Y+ H+AI A ++V Sbjct: 236 KLPTLKFKNRFTTLEEACNLSVDDIELEDYKCHSAIKAPMAV 277 >gi|1480449|gb|AAC47229.1| bifunctional dihydrofolate reductase-thymidylate synthase [Cryptosporidium parvum] Length = 499 Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats. Identities = 120/261 (45%), Positives = 166/261 (63%), Gaps = 21/261 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYLDLL V++ G+ R +RTG+ T S FG MRFD+ + FPLLTTKKV +S+ EL+WF Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298 Query: 63 LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102 ++GD+N ++L V IW ++ +LGPIYG QWR + Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161 DY G +DQ++ ++++L+ +P RRHI++AWN + + +MALPPCH L Q+YV N LSC Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 LYQRS D+ LG PFNIASY++LTMMLA V G++ GE +GD H+Y NH Q QLS Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478 Query: 222 RSPRTLPQMIINPNIVDLLSF 242 R+PR PQ+ + ++ F Sbjct: 479 RTPRPFPQLKFKRKVENIEDF 499 >gi|311993229|ref|YP_004010095.1| dTMP thymidylate synthase [Enterobacteria phage CC31] gi|284178067|gb|ADB81733.1| dTMP thymidylate synthase [Enterobacteria phage CC31] Length = 348 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 121/288 (42%), Positives = 167/288 (57%), Gaps = 32/288 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L++H+ G DRTG GT + FG Q+RFDL +GFP +TTKK+ WK+ + ELL Sbjct: 1 MKQYQQLIQHIFDEGYVTDDRTGTGTCAVFGTQLRFDLQEGFPAVTTKKLAWKACIAELL 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WFL G +NV+ L +G ++WD+ + DGELGP+YG QWR + Sbjct: 61 WFLSGSTNVNDLRLRQHGSPTNGKTVWDDNYENQARSMGYVDGELGPVYGKQWRDFM--- 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ++ ++ ++ P RR IV+AWN I KMALPPCH ++QF V NG L Q YQ Sbjct: 118 --GVDQLTLVINRIKELPNDRRQIVTAWNPLDIPKMALPPCHMIYQFNVRNGLLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G + G + T G+ H+Y+NH EQ + L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALIHIVAKMTGLKPGHLVFTGGNTHIYSNHIEQCEEILRREPK 235 Query: 226 TLPQMIIN-----------PNIVDLLSF-RYEDFTLRSYEPHAAILAK 261 L + I+ + + F EDF L +YE H I K Sbjct: 236 ELCNLEIDFPIEFERWQTSSQLKWINRFAVIEDFKLVNYESHPTIKGK 283 >gi|304373617|ref|YP_003858362.1| Td thymidylate synthetase [Enterobacteria phage RB16] gi|299829573|gb|ADJ55366.1| Td thymidylate synthetase [Enterobacteria phage RB16] Length = 284 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 128/285 (44%), Positives = 172/285 (60%), Gaps = 22/285 (7%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++ V+ G++ DRTGVGT FG Q R++L++GFP T+K++ +K HEL Sbjct: 1 MKQYLDIVNTVLTHGTESTDRTGVGTLRIFGMQARWNLAEGFPATTSKQLFFKPCKHELQ 60 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WFL G +NV L + +IWD+ + G LGPIYG QWRS+ Sbjct: 61 WFLEGSTNVETLRKMTWGEDSDKRTIWDDNYENQAKALGYTHGYLGPIYGHQWRSFGAEG 120 Query: 106 G-NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 + +DQI+ IV+ L+ P R IVSAWN +D MAL PCHC FQF V NGKLS Q Y Sbjct: 121 SFSGVDQIARIVKELKEKPDDRGIIVSAWNPVDLDDMALRPCHCFFQFVVINGKLSLQWY 180 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SR 222 QRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N EQA L R Sbjct: 181 QRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAVEQAKELLKPER 240 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFT---LRSYEPHAAILAKVSV 264 +P LP + + P + LL E F L+ Y H ++ A ++V Sbjct: 241 APLPLPTLYM-PKVNSLLDLDQEFFDSIHLKDYNHHGSLKAAMAV 284 >gi|85089414|ref|XP_957941.1| thymidylate synthase [Neurospora crassa OR74A] gi|28919227|gb|EAA28705.1| thymidylate synthase [Neurospora crassa OR74A] Length = 368 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 127/337 (37%), Positives = 167/337 (49%), Gaps = 74/337 (21%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------------- 41 +QYLDL+R ++ G R DRTG GT S F ++F LS+ Sbjct: 32 YQYLDLVRQILDEGELREDRTGTGTYSIFAPTPLKFALSRPSSSSPSSGSSSDPSSPDYT 91 Query: 42 ----FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------AD 85 PLLTTK+V K+V+ ELLWF+ ++ + L GV IWD Sbjct: 92 YTPILPLLTTKRVFTKAVLLELLWFISASTSSTTLSAQGVKIWDGNGSRAFLDMLGLSHR 151 Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 K+G+LGP+YG QWR + DY G +DQ+ I+ +LR +PY RR I+SAWN Sbjct: 152 KEGDLGPVYGFQWRHFGAEYVDCETDYTGQGVDQLQRIIDTLRNNPYDRRLILSAWNPKD 211 Query: 138 IDKMALPPCHCLFQFYVD-----------------------------NGKLSCQLYQRSG 168 + +M LPPCH QFYV G L CQLYQRS Sbjct: 212 MSQMVLPPCHMFAQFYVSYPGSRTRGGATQTQNKEGELDTPPKEKKPRGHLHCQLYQRSC 271 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+ LG+PFNIASY+LLT MLA V G H +GD H+Y NH + QL R PR P Sbjct: 272 DMGLGVPFNIASYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQLEREPREFP 331 Query: 229 QMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + I + ++ EDF ++ YEPH I ++SV Sbjct: 332 TLEIQREKGGSIDGWKAEDFVIKGYEPHKTIAMEMSV 368 >gi|326387810|ref|ZP_08209416.1| thymidylate synthase [Novosphingobium nitrogenifigens DSM 19370] gi|326207856|gb|EGD58667.1| thymidylate synthase [Novosphingobium nitrogenifigens DSM 19370] Length = 315 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 123/305 (40%), Positives = 166/305 (54%), Gaps = 42/305 (13%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL+ + G +R DRTGVGTRS FG +RFDLS G PLLTTK+++WK+ E L Sbjct: 11 QQYLDLMARIWSHGDERIDRTGVGTRSIFGTTLRFDLSDGQVPLLTTKRIYWKTATREFL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92 WFL G++N+ L GV IW +W + GELGP Sbjct: 71 WFLTGETNIRPLCAQGVEIWTDWPLDRYRRETGDRMTREDFSRRIVEDADFAARWGELGP 130 Query: 93 IYGVQWRSWPDYD-------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 +YG QW WP Y+ I+Q++ +V+ LR +P RRHIV WNVA +D Sbjct: 131 VYGKQWTDWPVYEADAAAGAGLFRRRERGINQVAELVEGLRRNPGGRRHIVEGWNVAELD 190 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 MALPPCH +QF+V +G+LS +YQRS DV LG+PFN+ +L MLA GE Sbjct: 191 AMALPPCHKTYQFHVADGRLSGIVYQRSCDVALGLPFNLWGGALFIHMLAQQCDLLPGEL 250 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 + GD HLY NH + + QL+R P P++++ + + DFT+ Y P + Sbjct: 251 VWMGGDTHLYLNHGDLVEAQLARQPAGSPRLVLGRRPASIFDYEIGDFTVLDYHPQKHLA 310 Query: 260 AKVSV 264 A V+V Sbjct: 311 APVAV 315 >gi|171678407|ref|XP_001904153.1| hypothetical protein [Podospora anserina S mat+] gi|170937273|emb|CAP61930.1| unnamed protein product [Podospora anserina S mat+] Length = 303 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 115/285 (40%), Positives = 154/285 (54%), Gaps = 41/285 (14%) Query: 21 RTGVGTRSTFGY-QMRFDLSKGF-----PLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74 RTG GT S F ++F LS PLLTTK+V ++++ ELLWF+ G ++ L Sbjct: 19 RTGTGTYSLFAPSPLKFSLSTPTGTPLLPLLTTKRVFTRAIILELLWFISGSTSSLPLSS 78 Query: 75 HGVSIWDEW------------ADKDGELGPIYGVQWRSWP--------DYDGNVIDQISS 114 V IWD ++G+LGP+YG QWR + DY G +DQ++ Sbjct: 79 QNVKIWDGNGSRAFLDSLGLTHREEGDLGPVYGFQWRHFGAEYVDSKTDYTGQGVDQLAR 138 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--------------NGKLS 160 IVQ+L+ +PY RR I+SAWN + +M LPPCH QFYV G L Sbjct: 139 IVQTLKTNPYDRRLILSAWNPKDMSQMVLPPCHMFAQFYVSYPRSRKETEEGREVKGHLH 198 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 CQLYQRS D+ LG+PFNIASY+LLT MLA V G H +GD H+Y NH + QL Sbjct: 199 CQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQL 258 Query: 221 SRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I + ++ EDF ++ Y PH I ++SV Sbjct: 259 EREPREFPELEIKREKGGSIDGWKLEDFEIKGYNPHKVISMEMSV 303 >gi|228861545|ref|YP_002854566.1| thymidylate synthetase [Enterobacteria phage RB14] gi|32709463|gb|AAP86750.1| thymidylate synthase [Enterobacteria phage RB14] gi|227438561|gb|ACP30874.1| thymidylate synthetase [Enterobacteria phage RB14] Length = 286 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 121/291 (41%), Positives = 170/291 (58%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELL 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WF+ G +NV+ L G +IWD+ + GELGPIYG QWR + Sbjct: 61 WFISGSTNVNDLRLRTHGSLIQGKTIWDDNYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ+ + ++ P RR IVSAWN A I++MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQLVETIDRIKKLPTDRRQIVSAWNPAEINQMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ LT ++A + G+ I + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLIFSGGNTHIYMNHTEQCKEILRREPK 235 Query: 226 TLPQMIINPNIVD-----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264 L ++ I+ I L + + +DF L +YE H AI K+++ Sbjct: 236 ELCELKIDWPIEFGNCDTETQLYWLTEYMKPKDFILENYESHPAIKGKMAI 286 >gi|32709477|gb|AAP86757.1| thymidylate synthase [Enterobacteria phage U5] Length = 286 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 120/291 (41%), Positives = 169/291 (58%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELL 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WF+ G +NV+ L G +IWD+ + GELGPIYG QWR + Sbjct: 61 WFISGSTNVNDLRLRTHGSLIQGKTIWDDNYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ+ + ++ P RR IVSAWN A I++MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQLVETIDRIKKLPTDRRQIVSAWNPAEINQMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ LT ++A + G+ I + G+ H+Y NH Q L R P+ Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLIFSGGNTHIYMNHTAQCKEILRREPK 235 Query: 226 TLPQMIINPNIVD-----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264 L ++ I+ I L + + +DF L +YE H AI K+++ Sbjct: 236 ELCELKIDWPIEFGNCDTETQLYWLTEYMKPKDFILENYESHPAIKGKMAI 286 >gi|330858750|ref|YP_004415125.1| putative thymidylate synthase [Shigella phage Shfl2] gi|327397684|gb|AEA73186.1| putative thymidylate synthase [Shigella phage Shfl2] Length = 286 Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 120/291 (41%), Positives = 167/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACISELL 60 Query: 61 WFLRGDSNVSYLHRH-------GVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L + G +IWDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRQRTHGSLIAGKTIWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI +V ++ P RR IVSAWN + +MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIVEVVNRIKTFPNDRRQIVSAWNPVELKQMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ + + G+ H+Y+NH EQ L+R+P Sbjct: 176 RSVDVFLGLPFNIASYAALLHIVADMCELVPGDLVFSGGNTHIYSNHIEQCKEILNRTPM 235 Query: 226 TLPQMIIN-PNIVDLLS-----------FRYEDFTLRSYEPHAAILAKVSV 264 L ++ IN PN DF L+ Y+ H + K++V Sbjct: 236 DLCKLSINWPNGFSQCDTETQMYWLTEYMTARDFVLKDYQSHGVLKGKMAV 286 >gi|15896255|ref|NP_349604.1| thymidylate synthase [Clostridium acetobutylicum ATCC 824] gi|25091479|sp|Q97EV3|TYSY_CLOAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|15026060|gb|AAK80944.1|AE007797_6 Thymidylate synthase [Clostridium acetobutylicum ATCC 824] gi|325510410|gb|ADZ22046.1| thymidylate synthase [Clostridium acetobutylicum EA 2018] Length = 263 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 105/266 (39%), Positives = 154/266 (57%), Gaps = 11/266 (4%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +YLD++ ++++ G +RTG+ T M+FDLSK FP+LTTK V +K+ V ELLW Sbjct: 6 EKYLDIIENILENGYYDNNRTGIETYKLPHQIMQFDLSKEFPILTTKFVAFKTSVKELLW 65 Query: 62 FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 + SN V L V+IWDEW +DG +G YG Q + QI +++ +L+ Sbjct: 66 IYKDQSNDVRKLQNENVTIWDEWMLEDGTIGKAYGYQVAKFK--------QIDNLIDTLK 117 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR ++S WN+A + M+L PC + V NGKL+C L QRSGD+ LG+PFN+ Sbjct: 118 TDPQSRRMLISLWNIADLKDMSLTPCCYETLWDVQNGKLNCMLVQRSGDMPLGVPFNMCQ 177 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVD 238 Y++L ++A V G + G F H + + H+Y N E +QL R P++ INPNI + Sbjct: 178 YAVLVHLIAQVTGLKPGLFTHVINNAHIYKNQIEGMKIQLKRRDKAYEAPKLWINPNIKN 237 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L Y+ H I +V+V Sbjct: 238 FYDFTADDIKLIDYKHHDKIKMEVAV 263 >gi|116326450|ref|YP_803170.1| thymidylate synthetase [Enterobacteria phage RB32] gi|32709461|gb|AAP86749.1| thymidylate synthase [Enterobacteria phage RB32] gi|115344043|gb|ABI95052.1| thymidylate synthetase [Enterobacteria phage RB32] Length = 286 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 119/291 (40%), Positives = 166/291 (57%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235 Query: 226 TLPQMIIN-PNIVDLLS-----------FRYEDFTLRSYEPHAAILAKVSV 264 L ++ + P+ D + +F L +YE H +I K++V Sbjct: 236 DLCELQLKFPDEFDEWDTESQVFWLSQFVKPHNFVLNNYESHPSIKGKMAV 286 >gi|307293290|ref|ZP_07573136.1| thymidylate synthase [Sphingobium chlorophenolicum L-1] gi|306881356|gb|EFN12572.1| thymidylate synthase [Sphingobium chlorophenolicum L-1] Length = 296 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 118/296 (39%), Positives = 164/296 (55%), Gaps = 39/296 (13%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD 66 +RH+ + G +R DRTGVGTRS G MRF L+ PLLTTK+V+WK E+LWFL GD Sbjct: 1 MRHIWRHGDERIDRTGVGTRSILGATMRFSLADDAVPLLTTKRVYWKVAAREMLWFLTGD 60 Query: 67 SNVSYLHRHGVSIWDEWA----------------------------DKDGELGPIYGVQW 98 +N+ L R GV IW +W + G+LGP+YG QW Sbjct: 61 TNIRELVRQGVHIWTDWPLDAYRRATGEDIDRDAFEARIVEDEAFAARWGDLGPVYGAQW 120 Query: 99 RSWPDYDG----------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 +WP Y+ +QI+ +V+ +R +P SRR + + WNVA + +M+LPPCH Sbjct: 121 VNWPRYEAVGDGLYRKAAQGHNQIADLVEGIRNNPGSRRLLFTGWNVAEVSRMSLPPCHM 180 Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 +QF V +G+L+ L+QRS D+ LG FNI S++T MLA + GE + GDVHL Sbjct: 181 TYQFQVADGRLNGLLFQRSCDLGLGFAFNIFGLSMITRMLAQQCDLKPGEVVWQGGDVHL 240 Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Y NH E + Q+ R+P P++ IN + +R EDF + Y P I A V+V Sbjct: 241 YLNHAELVEEQIGRNPSGAPKLRINRRPSSIFDYRIEDFEVVDYAPQRHIAAPVAV 296 >gi|228861163|ref|YP_002854186.1| thymidylate synthetase [Enterobacteria phage RB51] gi|32709467|gb|AAP86752.1| thymidylate synthase [Enterobacteria phage RB61] gi|227438837|gb|ACP31149.1| thymidylate synthetase [Enterobacteria phage RB51] Length = 286 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 117/292 (40%), Positives = 163/292 (55%), Gaps = 34/292 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELI 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI ++ ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILCREPM 235 Query: 226 TLPQMIINPNIVDLLSFRYE-------------DFTLRSYEPHAAILAKVSV 264 L ++ + + + E +F L +YE H I K++V Sbjct: 236 DLCELQLKF-PDEFDEWDTESQVFWLSQFAKPHNFVLNNYESHPPIKGKMAV 286 >gi|32709469|gb|AAP86753.1| thymidylate synthase [Enterobacteria phage RB23] Length = 286 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 116/292 (39%), Positives = 163/292 (55%), Gaps = 34/292 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY L++ +++ G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+ Sbjct: 1 MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI ++ ++ P RR IVSAWN A + +MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKQMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L ++A + G+ I + G+ H+Y NH EQ L R P Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKICNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235 Query: 226 TLPQMIINPNIVDLLSFRYE-------------DFTLRSYEPHAAILAKVSV 264 L ++ + + + E +F L Y H I K++V Sbjct: 236 DLCELQLKF-PDEFDEWDTESQVFWLSQFAKPHNFVLNDYVSHPPIKGKMAV 286 >gi|260889012|ref|ZP_05900275.1| thymidylate synthase [Leptotrichia hofstadii F0254] gi|260861072|gb|EEX75572.1| thymidylate synthase [Leptotrichia hofstadii F0254] Length = 289 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 121/292 (41%), Positives = 166/292 (56%), Gaps = 31/292 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++++V+ G + +RTGV T STF Y + DLS+G+PLLTTKK+++ S++HEL Sbjct: 1 MKQYLDMVKYVLDNGIKKENRTGVDTISTFAYSYKVDLSEGYPLLTTKKMYFNSMLHELF 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP------------------ 102 W+L G+ ++ L + IWD WAD++G L YG WR +P Sbjct: 61 WYLSGEEHIKNLRKK-TKIWDAWADEEGRLETAYGRFWRRYPVPEISLDGEVFADENNPW 119 Query: 103 ---DYDGNVI-DQISSIVQSLR------ADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 + +G ++ DQI I+ +L+ RR IV AWN LPPCH F F Sbjct: 120 VTREKNGQLVFDQIQYIIDTLKEMKTNPNHKNGRRMIVLAWNPGNATISKLPPCHYTFAF 179 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 V KL+C L QRSGD+ LGIPFN+A YSLLTMM+A G++ GEF HT+ D H+Y NH Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEAGEFAHTIIDAHIYENH 239 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL+R P LP++ I +ED +L YE H I +V+V Sbjct: 240 IEGLKEQLTREPLKLPKIKIADKP--FNELTFEDISLEDYESHPVIKFEVAV 289 >gi|187935542|ref|YP_001887622.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B] gi|187723695|gb|ACD24916.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B] Length = 263 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 100/265 (37%), Positives = 148/265 (55%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL++ ++++ G +RTG+ T M+F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V IWDEW +DG +G YG + + DQI ++ SL+ Sbjct: 67 FKDQSNDVKKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIHSLKN 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ W + +D AL PC L + V +G+L+C L QRSGD LGIPFN + Y Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGRLNCMLVQRSGDWPLGIPFNTSQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239 ++LT ++A V G + G F H + + H+Y N + QL R P++ INP I D Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVINNAHIYENQIDGMKTQLERKDQSYDAPKLWINPEIKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L +Y+ H +I VSV Sbjct: 239 YDFTPDDIKLENYKHHESIKMPVSV 263 >gi|330723643|gb|AEC46013.1| thymidylate synthase [Mycoplasma hyorhinis MCLD] Length = 270 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 133/273 (48%), Positives = 179/273 (65%), Gaps = 34/273 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+ LRH+++ G + +RT V + +TFGYQMRFDLS+GFPL+TTKK ++ S+ HELL Sbjct: 1 MRQYLEFLRHILQKGIKKTNRTIVDSINTFGYQMRFDLSEGFPLVTTKKTNFASIAHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91 WF++GD+N+ YL + V+IW+EW ++ GELG Sbjct: 61 WFIKGDTNIKYLVDNNVNIWNEWPYENYKKSKEFQGESLKEFIVKIKENPSFAKQFGELG 120 Query: 92 PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 P+YG QWR++ +DQ+ ++Q ++ +P SRR IVSAWN ID M LPPCH LFQ Sbjct: 121 PVYGKQWRNFL-----GVDQLKKVIQEIKTNPNSRRLIVSAWNPLEIDSMLLPPCHSLFQ 175 Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 FYV N KLSCQLYQRS D FLG+PFNIASYSLL M+A + GEFIHT+GD H+Y N Sbjct: 176 FYVANNKLSCQLYQRSADAFLGVPFNIASYSLLVFMIAQECELEVGEFIHTIGDAHIYVN 235 Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRY 244 H +Q +LQL+R P LP++ I N+ + + + Sbjct: 236 HIDQVNLQLTRIPHKLPKLKITKNLFLIFNLKI 268 >gi|32709479|gb|AAP86758.1| thymidylate synthase [Enterobacteria phage T6] gi|113952002|gb|ABI48939.1| Td [Enterobacteria phage T6] Length = 286 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 118/292 (40%), Positives = 162/292 (55%), Gaps = 34/292 (11%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ + + G + DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 61 WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +NV+ L G ++WDE + GELGPIYG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQI +V ++ P RR IVSAWN A + MALPPCH +QF V NG L Q YQ Sbjct: 117 -GGVDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PFNIASY+ L + A + G+ I + G+ H+Y NH EQ L R P Sbjct: 176 RSVDVFLGLPFNIASYAALVHIAAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235 Query: 226 TLPQMIINPNIVDLLSFRYE-------------DFTLRSYEPHAAILAKVSV 264 L ++ + + + E +F L +Y H I K++V Sbjct: 236 DLCELQLKF-PDEFDEWNTESQVFWLSQFAKPHNFVLNNYVSHPPIKGKMAV 286 >gi|251781262|ref|ZP_04824178.1| thymidylate synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081709|gb|EES47770.1| thymidylate synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 263 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 100/265 (37%), Positives = 147/265 (55%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL++ ++++ G +RTG+ T M+F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V IWDEW +DG +G YG + + DQI ++ SL+ Sbjct: 67 FKDQSNDVKKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIDSLKN 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ W + +D AL PC L + V +GKL+C L QRSGD LGIPFN + Y Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGKLNCMLVQRSGDWPLGIPFNTSQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDL 239 ++LT ++A V G + G F H + + H+Y N + QL R P++ INP I D Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVINNAHIYENQIDGMKTQLERKDQAYDAPKLWINPEIKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L Y+ H +I VS+ Sbjct: 239 YDFTPDDIKLEDYKHHESIKMPVSI 263 >gi|302309826|ref|XP_448463.2| hypothetical protein [Candida glabrata CBS 138] gi|196049169|emb|CAG61424.2| unnamed protein product [Candida glabrata] Length = 256 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 112/288 (38%), Positives = 147/288 (51%), Gaps = 65/288 (22%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL +IK G R DRTG G Sbjct: 9 KQYLDLCERIIKEGEFRPDRTGTGC----------------------------------- 33 Query: 62 FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102 ++ L GV IW+ ++G+LGP+YG QWR + Sbjct: 34 -----TDAKKLSDQGVKIWEGNGSREYLDKMGFVDRREGDLGPVYGFQWRHFGAEYKTCE 88 Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--- 158 DY G +DQ+ ++ L+ +PY RR I+SAWN KMALPPCH QFYV+ K Sbjct: 89 DDYTGQGVDQLKEVIHKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFSQFYVNFPKDGK 148 Query: 159 --LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 LSC LYQRS D+ LG+PFNIASY+LLT M+A V + GEFIHTLGD H+Y +H + Sbjct: 149 PQLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVCDMEPGEFIHTLGDAHVYKDHVDAL 208 Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+SR+PR P++ IN + D+ F++EDF L Y+PH I +SV Sbjct: 209 KEQISRTPRDFPKLRINRKVSDIDDFKFEDFVLEEYDPHPRIQMNMSV 256 >gi|188590339|ref|YP_001922592.1| thymidylate synthase [Clostridium botulinum E3 str. Alaska E43] gi|188500620|gb|ACD53756.1| thymidylate synthase [Clostridium botulinum E3 str. Alaska E43] Length = 263 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 100/265 (37%), Positives = 148/265 (55%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL++ ++++ G +RTG+ T M+F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V IWDEW +DG +G YG + + DQI ++ SL+ Sbjct: 67 FKDQSNDVRKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIYSLKN 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ W + +D AL PC L + V +G+L+C L QRSGD LGIPFN + Y Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGRLNCMLVQRSGDWPLGIPFNTSQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDL 239 ++LT ++A V G + G F H + + H+Y N + QL R P++ INP I D Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVVNNAHIYENQIDGMKTQLERKDQAYDAPKLWINPEIKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L +Y+ H +I VSV Sbjct: 239 YDFTPDDIKLENYKHHESIKMPVSV 263 >gi|148927741|ref|ZP_01811178.1| Thymidylate synthase [candidate division TM7 genomosp. GTL1] gi|147886915|gb|EDK72448.1| Thymidylate synthase [candidate division TM7 genomosp. GTL1] Length = 280 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 114/269 (42%), Positives = 163/269 (60%), Gaps = 11/269 (4%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QYL L+ ++K G + R G ++ FGYQ+RFD+ +GFPLLTTKK+ +K ++HEL W Sbjct: 6 YQYLQLMADILKDGRSKPSRGIHGLKAIFGYQIRFDMRQGFPLLTTKKMPFKILLHELFW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK-DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F+ G S+V YLH H + WD + + +LG +YGVQWR W DG+ DQ+ ++ ++ Sbjct: 66 FISGSSSVDYLHEHKIHYWDGFLHEGSDDLGRVYGVQWRHWLRPDGSQFDQLQWAIEQIK 125 Query: 121 ADPYSRRHIVSAWN----------VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 +P S+ IVSAWN M LPPCH +FQF V GKL QLYQRS DV Sbjct: 126 TNPNSKAIIVSAWNAGELGDKRWNPNDYGDMRLPPCHTMFQFDVTGGKLRMQLYQRSSDV 185 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 FLG+PFNIA Y++L M+A + + E I ++G HLY N E A Q+ R P P++ Sbjct: 186 FLGLPFNIAQYAMLLHMVAYLADLEPRELIISIGSAHLYRNQIEPAKEQVRRKPYRFPKL 245 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 I ++ D+ F+ ++F+L Y+ H I Sbjct: 246 TIAGDVKDIDDFKEKNFSLEGYQSHPHIK 274 >gi|29337127|sp|Q9ANR7|TYSY_BACMO RecName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|12958589|gb|AAK09364.1|AF321518_1 thymidylate synthase [Bacillus mojavensis] Length = 279 Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 102/275 (37%), Positives = 153/275 (55%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFG----------SDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ +IK G D T T S QMRFD S+ P+LTTKKV Sbjct: 6 KQYNSIIKEIIKNGISDEEFDVRTKWESDGTPAHTLSIITKQMRFDNSE-VPILTTKKVA 64 Query: 52 WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-PDYDGNVI 109 WK+ + ELLW + ++V+ L++ GV IWD+W +DG +G YG Q + +G + Sbjct: 65 WKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGSIGHAYGFQLAKKNRNLNGEKV 124 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+YV GKL ++ RS D Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQWYVKQGKLHLEVRARSND 184 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P+ Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPK 244 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP + D F +DF L +Y+ + +V+V Sbjct: 245 LWINPEVKDFYDFTIDDFKLINYKHGDRLSFEVAV 279 >gi|150019760|ref|YP_001312014.1| thymidylate synthase [Clostridium beijerinckii NCIMB 8052] gi|189036930|sp|A6M378|TYSY_CLOB8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|149906225|gb|ABR37058.1| Thymidylate synthase [Clostridium beijerinckii NCIMB 8052] Length = 263 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 99/265 (37%), Positives = 145/265 (54%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL + +++ G +RTGV T M+F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 KYLAIANDILENGYFDNNRTGVKTYKLPHQIMQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V IWDEW +DG +G YG + + DQI ++ +L+ Sbjct: 67 FKDQSNSVKELQSQNVKIWDEWMMEDGTIGTSYGWIVKKF--------DQIDKLIDALKN 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ W + +D L PC L + V +GKL+C L QRSGD LG+PFN + Y Sbjct: 119 NPQDRRMMINLWQIPYLDSAPLYPCCFLTMWDVTDGKLNCMLVQRSGDWGLGVPFNTSQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239 ++L +LA V G + G F H + + H+Y N + LQL+R P++ INP I + Sbjct: 179 AVLVHLLAQVTGLKPGLFTHVINNAHIYENQVDGLKLQLTRKNDAYNAPKLWINPEITNF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L Y+ H +I VSV Sbjct: 239 YDFTPDDIKLEDYKHHESIKMDVSV 263 >gi|308814595|ref|YP_003934869.1| thymidylate synthase [Shigella phage SP18] gi|308206187|gb|ADO19586.1| thymidylate synthase [Shigella phage SP18] Length = 286 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL++ V G DRTG GT +TFG ++ +D+S+GFP T K++ +KSVV ELL Sbjct: 1 MKNYQDLIQTVFDIGYQTDDRTGTGTIATFGTKVEWDMSEGFPATTVKRLAYKSVVGELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WFL G +NV L +IWD+ + DGELGP+YG QWR + Sbjct: 61 WFLEGSTNVERLREITHGAGSDKKTIWDQNFEAQGRALGYVDGELGPVYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ+ ++ ++ P RR IVSAWN A + +MALPPCH L+QF V +G+L YQ Sbjct: 117 -GGVDQLVETIEKVKKVPTDRRQIVSAWNPAELKQMALPPCHLLYQFNVHDGELDLLWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PF+I SY L ++A + G + G+ + G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFDIGSYGTLLHIVAKMTGLKPGKLVFMGGNTHIYLNHIEQCKEVLRREPK 235 Query: 226 TLPQMIIN-PNIVDLLSFRY-----------EDFTLRSYEPHAAILAKVSV 264 TLP + IN P L DF L +YEPH I A ++V Sbjct: 236 TLPTLKINWPEQFHLWDTEMQLYWVTRHMSPADFVLENYEPHPTIAAPMAV 286 >gi|313892946|ref|ZP_07826523.1| thymidylate synthase [Veillonella sp. oral taxon 158 str. F0412] gi|313442299|gb|EFR60714.1| thymidylate synthase [Veillonella sp. oral taxon 158 str. F0412] Length = 263 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 104/265 (39%), Positives = 153/265 (57%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ ++++ G+ ++RTGV T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILEHGTYGQNRTGVATYKLPHQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ +++++++ Sbjct: 67 WQMQSNDVRKLQEMNVRVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ +D MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVADGHLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239 + L M+A V G + G+F H + + H+Y NH E QL+R P++I+NP + D Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHVYENHVEALREQLARRDQALPAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V+V Sbjct: 239 YDFTPEDVTLDGYEHLGKLSMTVAV 263 >gi|46401828|ref|YP_006920.1| putative thymidylate synthase [Enterobacteria phage T5] gi|45775006|gb|AAS77138.1| putative thymidylate synthase [Enterobacteria phage T5] gi|51512030|gb|AAU05229.1| thymidylate synthase [Enterobacteria phage T5] gi|59897229|gb|AAX12024.1| thymidylate synthase [Enterobacteria phage T5] Length = 279 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 130/285 (45%), Positives = 171/285 (60%), Gaps = 29/285 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL +L VI G R DRTG GT S F +FDL +GFP +TTK++ WKSVV ELL Sbjct: 1 MQQYLKILTDVILLGEPRNDRTGTGTVSIFDSYAKFDLREGFPAVTTKRLAWKSVVGELL 60 Query: 61 WFLRGDSNVSYLHRHGV-------SIWDEWADKD--------GELGPIYGVQWRSWPDYD 105 WFL G +N+ L +IW + G LGP+YG QWR++ Sbjct: 61 WFLSGSTNLHDLRVFTFGRDEGQWTIWTPNYEDQAISMGYDKGNLGPVYGKQWRNF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLY 164 DQI +++ L+ +P+ RRH+VSAWNVA +DKMALPPCH FQ YV ++G L + Sbjct: 117 -GGRDQILELIEGLKNNPHGRRHLVSAWNVAELDKMALPPCHYGFQCYVSNDGYLDLKWT 175 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS D FLG+PFNIASY+LLT +LA + G + I + GD H+YN+H EQ + Q+ R P Sbjct: 176 QRSVDCFLGLPFNIASYALLTHILAKLTGLKPRYLIFSGGDTHIYNDHMEQVEEQVKRKP 235 Query: 225 RTLPQMIINPNIVDLLSFRYED------FTLRSYEPHAAILAKVS 263 R LP +++ P VDL E+ F L Y+PH A+ AK+S Sbjct: 236 RPLPTLVM-PEFVDLYDL-LENNTAAWSFHLEGYDPHPALKAKMS 278 >gi|4388862|pdb|1BKO|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4388863|pdb|1BKO|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4388864|pdb|1BKO|C Chain C, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4388865|pdb|1BKO|D Chain D, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4388866|pdb|1BKP|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4388867|pdb|1BKP|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4389238|pdb|1BSF|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4389239|pdb|1BSF|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4558131|pdb|1BSP|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis gi|4558132|pdb|1BSP|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis Length = 278 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 102/275 (37%), Positives = 152/275 (55%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ +I G D T T S QMRFD S+ P+LTTKKV Sbjct: 5 KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVA 63 Query: 52 WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY-DGNVI 109 WK+ + ELLW + ++V+ L+ GV IWD+W +DG +G YG Q +G + Sbjct: 64 WKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKV 123 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+YV +GKL ++ RS D Sbjct: 124 DQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSND 183 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P+ Sbjct: 184 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 243 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP + D F +DF L +Y+ +L +V+V Sbjct: 244 LWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 278 >gi|16078831|ref|NP_389651.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168] gi|221309650|ref|ZP_03591497.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168] gi|221313972|ref|ZP_03595777.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318895|ref|ZP_03600189.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323168|ref|ZP_03604462.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. SMY] gi|317412154|sp|P0CI79|TYSY1_BACSU RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1; AltName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|4699624|pdb|1B02|A Chain A, Crystal Structure Of Thymidylate Synthase A From Bacillus Subtilis gi|607048|emb|CAA55307.1| thymidylate synthetase [Bacillus subtilis] gi|2634152|emb|CAB13652.1| thymidylate synthase A [Bacillus subtilis subsp. subtilis str. 168] Length = 279 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 102/275 (37%), Positives = 152/275 (55%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ +I G D T T S QMRFD S+ P+LTTKKV Sbjct: 6 KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVA 64 Query: 52 WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY-DGNVI 109 WK+ + ELLW + ++V+ L+ GV IWD+W +DG +G YG Q +G + Sbjct: 65 WKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKV 124 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+YV +GKL ++ RS D Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSND 184 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P+ Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 244 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP + D F +DF L +Y+ +L +V+V Sbjct: 245 LWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 279 >gi|269120222|ref|YP_003308399.1| thymidylate synthase [Sebaldella termitidis ATCC 33386] gi|268614100|gb|ACZ08468.1| thymidylate synthase [Sebaldella termitidis ATCC 33386] Length = 289 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 118/292 (40%), Positives = 159/292 (54%), Gaps = 31/292 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++++V++ G + +RTGV T S F Y R DLS+G+PLLTTKK+++ S++ EL Sbjct: 1 MKQYLDMVKYVLENGIKKENRTGVDTISNFAYFYRVDLSEGYPLLTTKKMYFNSMLKELF 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVI------- 109 W+L G+ ++ L + IWD WAD++G L YG WR +P DG V Sbjct: 61 WYLSGEEHIKNLRK-DTKIWDAWADEEGRLETAYGRFWRRYPVPETHLDGEVFADESSKW 119 Query: 110 -----------DQISSIVQSLR------ADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 DQI ++ +L+ RR IV AWN LPPCH F F Sbjct: 120 VTRESNGQLVFDQIGYVIDTLKEMKTNPNHKNGRRLIVLAWNPGNAAISKLPPCHYTFAF 179 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 V KL+C L QRSGD+ LGIPFN+A YSLLTMM+A G++ GEF HT+ D H+Y NH Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEPGEFAHTIIDAHIYENH 239 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL R P L ++ I ++D L Y H I +V+V Sbjct: 240 IEGLKEQLKREPLKLSKIEIADKP--FDELTFDDVKLVDYVSHPLIKFEVAV 289 >gi|238018729|ref|ZP_04599155.1| hypothetical protein VEIDISOL_00573 [Veillonella dispar ATCC 17748] gi|237865200|gb|EEP66490.1| hypothetical protein VEIDISOL_00573 [Veillonella dispar ATCC 17748] Length = 263 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ ++++ G+ ++RTGV T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILEHGTYGQNRTGVATYKLPHQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ ++++++ Sbjct: 67 WQMQSNDVRKLQEMNVRVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ +D MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVADGHLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239 + L M+A V G + G+F H + + H+Y NH E QL+R + L P++I+NP + D Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHVYENHVEALREQLARRDQALSAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V+V Sbjct: 239 YDFTPEDVTLDGYEHLGKLSMTVAV 263 >gi|321311405|ref|YP_004203692.1| thymidylate synthase [Bacillus subtilis BSn5] gi|320017679|gb|ADV92665.1| thymidylate synthase [Bacillus subtilis BSn5] Length = 279 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 101/275 (36%), Positives = 153/275 (55%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ +I G D T T S QMRFD S+ P+LTTKKV Sbjct: 6 KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVA 64 Query: 52 WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY-DGNVI 109 WK+ + ELLW + ++V+ L++ GV IWD+W +DG +G YG Q +G + Sbjct: 65 WKTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKV 124 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRHI WN +D M+L PC Q+YV GKL ++ RS D Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDDLDAMSLTPCVYETQWYVKQGKLHLEVRARSND 184 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P+ Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 244 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP + D +F +DF L +Y+ +L +V+V Sbjct: 245 LWINPEVKDFYNFTIDDFKLINYKHGDKLLFEVAV 279 >gi|257125466|ref|YP_003163580.1| thymidylate synthase [Leptotrichia buccalis C-1013-b] gi|257049405|gb|ACV38589.1| thymidylate synthase [Leptotrichia buccalis C-1013-b] Length = 289 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 120/292 (41%), Positives = 164/292 (56%), Gaps = 31/292 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLD++++V+ G + +RTGV T STF Y + DLS+G+PLLTTKK+++ S++HEL Sbjct: 1 MKQYLDMVKYVLDNGVKKENRTGVDTISTFAYSYKVDLSEGYPLLTTKKMYFNSMLHELF 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP------------------ 102 W+L G+ ++ L + IWD WAD++G L YG WR +P Sbjct: 61 WYLSGEEHIKNLRKK-TKIWDAWADEEGRLQTAYGRFWRRYPVPEISLDGEVFADEDNPW 119 Query: 103 ---DYDGNVI-DQISSIVQSLR------ADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 + +G ++ DQI I+ +L+ RR IV AWN LPPCH F F Sbjct: 120 VTREENGQLVFDQIQYIIDTLKEMKTNPNHKNGRRMIVLAWNPGNATISKLPPCHYTFAF 179 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 V KL+C L QRSGD+ LGIPFN+A YSLLTMM+A G++ GEF HT+ D H+Y NH Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEVGEFAHTIIDAHIYENH 239 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL+R P L ++ I +ED L YE H I +V+V Sbjct: 240 IEGLKEQLTREPLKLAKIKIVDKP--FNELTFEDIMLEDYESHPVIKFEVAV 289 >gi|296330980|ref|ZP_06873455.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674499|ref|YP_003866171.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23] gi|317412153|sp|E0TVT6|TYSY1_BACPZ RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1; AltName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|296151985|gb|EFG92859.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412743|gb|ADM37862.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23] Length = 279 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 101/275 (36%), Positives = 153/275 (55%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ ++ G D T T S QMRFD S+ P+LTTKKV Sbjct: 6 KQYNSIIKDIMNNGISDEEFNVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVA 64 Query: 52 WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-PDYDGNVI 109 WK+ + ELLW + ++V+ L++ GV IWD+W +DG +G YG Q + +G + Sbjct: 65 WKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRNLNGEKV 124 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+YV GKL ++ RS D Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQWYVKQGKLHLEVRARSND 184 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P+ Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 244 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP + D F +DF L +Y+ +L +V+V Sbjct: 245 LWINPEVKDFYDFTIDDFKLFNYKHGDKLLFEVAV 279 >gi|269798443|ref|YP_003312343.1| thymidylate synthase [Veillonella parvula DSM 2008] gi|269095072|gb|ACZ25063.1| thymidylate synthase [Veillonella parvula DSM 2008] Length = 263 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 102/265 (38%), Positives = 150/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ ++++++ Sbjct: 67 WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ +D MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239 + L M+A V G + G+F H + + H+Y NH + QL+R P++I+NP + D Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLARRNQALPAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V+V Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263 >gi|125973742|ref|YP_001037652.1| thymidylate synthase [Clostridium thermocellum ATCC 27405] gi|256005544|ref|ZP_05430505.1| thymidylate synthase [Clostridium thermocellum DSM 2360] gi|281417898|ref|ZP_06248918.1| thymidylate synthase [Clostridium thermocellum JW20] gi|125713967|gb|ABN52459.1| thymidylate synthase [Clostridium thermocellum ATCC 27405] gi|255990524|gb|EEU00645.1| thymidylate synthase [Clostridium thermocellum DSM 2360] gi|281409300|gb|EFB39558.1| thymidylate synthase [Clostridium thermocellum JW20] gi|316940064|gb|ADU74098.1| thymidylate synthase [Clostridium thermocellum DSM 1313] Length = 276 Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 12/271 (4%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++ + + +++ G D T T FG R+DLS+ FP+LT + + K+ Sbjct: 8 FIAMCKDILENGVSSEGEKVRARWADGTPAHTIKKFGVVNRYDLSEEFPILTLRPTNLKA 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 + ELLW + SN + IWD WAD++G +G YG Q Y DQ+ Sbjct: 68 AIDELLWIWQKKSN--NIKDLNSHIWDSWADENGSIGKAYGYQLSIKHKYPEGEFDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 I+ L+ +PYSRR I + +N + + +M L PC F V KL+ L QRS DV + Sbjct: 126 IIYDLKHNPYSRRIIANMYNHSDLHEMNLYPCAYSITFNVTGRKLNAILNQRSQDVLVAN 185 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 +N+A Y++L M A V + GE +H + D H+Y+ H + R+P P++ INP Sbjct: 186 NWNVAQYAILVHMFAQVCDLEVGELVHVIADAHIYDRHIPLVKELIQRTPYPAPKLWINP 245 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 D F+ EDF L Y+ I V++ Sbjct: 246 EKKDFYDFKVEDFVLEDYQAGPQIKNIPVAI 276 >gi|311993503|ref|YP_004010368.1| Td dTMP synthase [Acinetobacter phage Acj9] gi|295917460|gb|ADG60131.1| Td dTMP synthase [Acinetobacter phage Acj9] Length = 320 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 122/320 (38%), Positives = 171/320 (53%), Gaps = 56/320 (17%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M QY DL++ ++ G +RTG GT S FG Q++FDL+ FP +TTKK+ WK+VV EL Sbjct: 1 MQQYHDLMQKILDEGDLIETERTGTGTLSIFGEQLKFDLADYFPAITTKKLAWKAVVSEL 60 Query: 60 LWFLRGDSNVSYLH-----------RHGVSIWDEWADK--------DGELGPIYGVQWRS 100 LWFL+G SN++ L +IWD +K DGE+G IYG QWRS Sbjct: 61 LWFLKGSSNLNELRAILHGEENRFNEEKKTIWDGNYNKQAKDLGYTDGEMGDIYGAQWRS 120 Query: 101 WP-----------------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI----- 138 + DY+ +DQ+ ++ + +P SRR IV AWN ++ Sbjct: 121 FGRKTLQIEDENCKVVCYDDYEVKGVDQVKLVLDEAKRNPSSRRLIVQAWNPDVVWNSKK 180 Query: 139 -----------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 ++ ALPPCH ++Q + NG+L QRS D+FLG+ FNIASY+LL + Sbjct: 181 TKVGHTMIIGGNEAALPPCHLMYQLRIVNGRLDMSWSQRSNDIFLGVCFNIASYALLQHI 240 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF---RY 244 A ++G + G+ LGD H+Y NH +Q LQLSR + PQ+ INP + L F Sbjct: 241 FARILGLKVGKLTGFLGDCHIYLNHVDQVKLQLSRDHLSKPQLEINPALKTLEDFENATV 300 Query: 245 EDFTLRSYEPHAAILAKVSV 264 +DF L H AI A ++V Sbjct: 301 DDFKLVGLITHGAIKADMAV 320 >gi|313892103|ref|ZP_07825699.1| thymidylate synthase [Dialister microaerophilus UPII 345-E] gi|313119495|gb|EFR42691.1| thymidylate synthase [Dialister microaerophilus UPII 345-E] Length = 263 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 101/267 (37%), Positives = 156/267 (58%), Gaps = 12/267 (4%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL +++++++ GS +RTG+ M+FDL K FP+LTTK V +K+ + E+LW Sbjct: 5 KQYLGIVKNILENGSLGNNRTGMPAYKLPHQIMQFDLEKEFPILTTKFVAFKTSIKEILW 64 Query: 62 FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 + SN V L + IWDEW KDG +G YG Q + + Q+ +++ L+ Sbjct: 65 IWQKQSNDVRELQKWNCHIWDEWMLKDGTIGKAYGYQLKEYK--------QVDTLLDLLK 116 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIA 179 +P SRR +V WNV + +MAL PC L + V +G+L+C L QRSGD+ LG+PFN+A Sbjct: 117 NNPESRRMVVDLWNVKDLPEMALYPCAFLTMWDVTSDGRLNCMLVQRSGDMGLGVPFNMA 176 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIV 237 Y+ LT M+A V G + G F H + + H+Y NH E +QL+R P++++N ++ Sbjct: 177 QYAALTHMIAQVSGLKAGLFTHVINNAHIYQNHVEALKVQLARLDEAYEAPKIVLNKDVK 236 Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264 + F+ ED L +Y+ H + VSV Sbjct: 237 NFYDFKPEDIVLENYKHHGKLPMAVSV 263 >gi|26353640|dbj|BAC40450.1| unnamed protein product [Mus musculus] Length = 222 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 20/222 (9%) Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 1 IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 60 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 61 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 120 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 121 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 180 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 181 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 222 >gi|329121533|ref|ZP_08250156.1| thymidylate synthase [Dialister micraerophilus DSM 19965] gi|327468832|gb|EGF14305.1| thymidylate synthase [Dialister micraerophilus DSM 19965] Length = 263 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 100/267 (37%), Positives = 155/267 (58%), Gaps = 12/267 (4%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL +++++++ GS +RTG+ M+FDL K FP+LTTK V +K+ + E+LW Sbjct: 5 KQYLGIVKNILENGSLGNNRTGMSAYKLPHQIMQFDLEKEFPILTTKFVAFKTSIKEILW 64 Query: 62 FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 + SN V L + IWDEW DG +G YG Q + + Q+ +++ L+ Sbjct: 65 IWQKQSNDVRELQKWNCHIWDEWMLNDGTIGKAYGYQLKEYK--------QVDTLLDLLK 116 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNIA 179 +P SRR +V WNV + +MAL PC L + V +G+L+C L QRSGD+ LG+PFN+A Sbjct: 117 NNPESRRMVVDLWNVKDLPEMALYPCAFLTMWDVASDGRLNCMLVQRSGDMGLGVPFNMA 176 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIV 237 Y+ LT M+A V G + G F H + + H+Y NH E +QL+R P++++N ++ Sbjct: 177 QYAALTHMIAQVSGLKAGLFTHVINNAHIYQNHVEALKVQLARLDEAYEAPKIVLNKDVK 236 Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264 + F+ ED L +Y+ H + VSV Sbjct: 237 NFYDFKPEDIVLENYKHHGKLPMAVSV 263 >gi|62901136|sp|Q5D189|TYSY_BACNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|60280529|gb|AAX18246.1| thymidylate synthase A [Bacillus subtilis subsp. natto] gi|291484369|dbj|BAI85444.1| thymidylate synthase [Bacillus subtilis subsp. natto BEST195] Length = 279 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 101/275 (36%), Positives = 154/275 (56%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ +I G D T T S QMRFD S+ P+LTTKKV Sbjct: 6 KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMSKQMRFDNSE-VPILTTKKVA 64 Query: 52 WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY-DGNVI 109 WK+ + ELLW + ++V+ L++ GV IWD+W +DG +G YG Q +G + Sbjct: 65 WKTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKV 124 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRHI WN +D M+L PC Q+YV +GKL ++ RS D Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDDLDAMSLTPCVYETQWYVKHGKLHLEVRARSND 184 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P+ Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 244 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP + D +F +DF L +Y+ +L +V+V Sbjct: 245 LWINPEVKDFYNFTIDDFKLINYKHGDKLLFEVAV 279 >gi|136605|sp|P07606|TYSY_BPPHT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|215473|gb|AAA32353.1| thymidylate synthetase (EC 2.1.1.45) [Bacillus phage phi3T] gi|224477|prf||1106183A thymidylate synthetase Length = 279 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 102/275 (37%), Positives = 153/275 (55%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ +I G D T T S QMRFD S+ P+LTTKKV Sbjct: 6 KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMSKQMRFDNSE-VPILTTKKVA 64 Query: 52 WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY-DGNVI 109 WK+ + ELLW + ++V+ L++ GV IWD+W +DG +G YG Q +G + Sbjct: 65 WKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKV 124 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+YV GKL ++ RS D Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDDLDAMALTPCVYETQWYVKQGKLHLEVRARSND 184 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + +Q+ R P+ Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 244 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP + D +F +DF L +Y+ +L +V+V Sbjct: 245 LWINPEVKDFYNFTVDDFKLINYKHGDKLLFEVAV 279 >gi|314121810|ref|YP_004063929.1| dTMP thymidylate synthase [Enterobacteria phage vB_EcoM-VR7] gi|313151567|gb|ADR32623.1| dTMP thymidylate synthase [Enterobacteria phage vB_EcoM-VR7] Length = 286 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 32/291 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL++ V G DRTG GT +TFG ++ +D+S+GFP T K++ +KSVV ELL Sbjct: 1 MKNYQDLIQTVFDIGYQTDDRTGTGTIATFGTKVEWDMSEGFPATTVKRLAYKSVVGELL 60 Query: 61 WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WFL G +NV L +IWD+ + DGELGP+YG QWR + Sbjct: 61 WFLEGSTNVERLREITHGPDSDKKTIWDQNFEAQGRALGYVDGELGPVYGKQWRDF---- 116 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ+ ++ ++ P RR IVSAWN A + +MALPPCH L+QF V +G+L YQ Sbjct: 117 -GGVDQLVETIEKVKKVPTDRRQIVSAWNPAELKQMALPPCHLLYQFNVHDGELDLLWYQ 175 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DVFLG+PF+I SY L ++A + + G+ I G+ H+Y NH EQ L R P+ Sbjct: 176 RSVDVFLGLPFDIGSYGTLLHIVAKMTRLKPGKLIFMGGNTHIYLNHIEQCKEVLRREPK 235 Query: 226 TLPQMIIN-PNIVDLLSFRYE-----------DFTLRSYEPHAAILAKVSV 264 TLP + IN P L + DF L +YEPH I A ++V Sbjct: 236 TLPTLKINWPEQFQLWDTEMQLYWVTRHMSPGDFVLENYEPHPTIPAPMAV 286 >gi|182418738|ref|ZP_02950011.1| thymidylate synthase [Clostridium butyricum 5521] gi|237669671|ref|ZP_04529648.1| thymidylate synthase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377432|gb|EDT74988.1| thymidylate synthase [Clostridium butyricum 5521] gi|237654745|gb|EEP52308.1| thymidylate synthase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 263 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 94/265 (35%), Positives = 144/265 (54%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL + + +++ G +RTG+ T M+F+L K FP+LTTK V +K+ V ELLW Sbjct: 7 KYLSIAKDILENGYYDNNRTGMPTYKLPHQIMQFNLEKEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + +NV L V IWDEW +DG +G YG + + +QI ++ +L+ Sbjct: 67 FKDQSNNVKDLQAQNVRIWDEWEMEDGTIGTSYGWVVKKF--------NQIDKLIDALKN 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 +P RR +++ W +D AL PC + V +G+L+C L QRSGD+ LG+PFN + Y Sbjct: 119 NPQDRRMMLNLWQWEHLDGGALYPCCWATMWDVTDGRLNCMLIQRSGDLPLGVPFNTSQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDL 239 ++L +LA V G + G F H + + H+Y N E QL+R P++ INP I + Sbjct: 179 AVLVHLLAQVTGLKPGLFTHVINNAHIYENQIEGMKTQLTRKDDAYDAPKLWINPEIKNF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ++ L Y+ H I VSV Sbjct: 239 YDFTPDNIKLIDYKHHETIKMPVSV 263 >gi|294794647|ref|ZP_06759783.1| thymidylate synthase [Veillonella sp. 3_1_44] gi|294454977|gb|EFG23350.1| thymidylate synthase [Veillonella sp. 3_1_44] Length = 263 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ ++++++ Sbjct: 67 WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ ++ MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDL 239 + L M+ V G + G+F H + + H+Y NH + QL+R P++I+NP + D Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARREQALPAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V+V Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263 >gi|303231865|ref|ZP_07318576.1| thymidylate synthase [Veillonella atypica ACS-049-V-Sch6] gi|302513472|gb|EFL55503.1| thymidylate synthase [Veillonella atypica ACS-049-V-Sch6] Length = 263 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 100/265 (37%), Positives = 148/265 (55%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLNIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ +++++++ Sbjct: 67 WQMQSNDVRKLQDMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ + MAL PC + V NG L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLPDMALQPCAYETLWDVGNGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239 + L M+A V G + G+F H + + H+Y NH + QLSR P++ +N I D Sbjct: 179 AALLCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLSRRDQALPAPKISVNSQITDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L YE + V+V Sbjct: 239 YDFTPDDIVLEGYEHLGKLAMTVAV 263 >gi|282849967|ref|ZP_06259350.1| thymidylate synthase [Veillonella parvula ATCC 17745] gi|282580404|gb|EFB85804.1| thymidylate synthase [Veillonella parvula ATCC 17745] Length = 263 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ ++++++ Sbjct: 67 WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ ++ MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239 + L M+ V G + G+F H + + H+Y NH + QL+R P++I+NP + D Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARRDQALPAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V+V Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263 >gi|291287305|ref|YP_003504121.1| thymidylate synthase [Denitrovibrio acetiphilus DSM 12809] gi|290884465|gb|ADD68165.1| thymidylate synthase [Denitrovibrio acetiphilus DSM 12809] Length = 287 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 118/290 (40%), Positives = 159/290 (54%), Gaps = 29/290 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y D++R+V+ G +RTGV T S F Y R +L+ G+PLLTTKK+ + S+VHEL Sbjct: 1 MQVYKDMVRYVMDNGVYLPNRTGVATYSVFSYFYRVNLADGYPLLTTKKMFFNSMVHELF 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGN------------- 107 W+L G+ ++ L IWD WAD++G L YG WR +P + Sbjct: 61 WYLSGEEHIKDLRTK-TKIWDAWADEEGLLETAYGRFWRRFPVPEKGLNGENWGKKWTHK 119 Query: 108 -------VIDQISSIVQSLR---ADPYS---RRHIVSAWNVALIDKMALPPCHCLFQFYV 154 V DQI ++ +L+ +P RR +VSAW+ A + LPPCH + F V Sbjct: 120 DPETGQMVFDQIQYVIDNLKEVKNNPNCSAQRRLVVSAWHPANAAESKLPPCHYTYCFSV 179 Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 GKL+C L QRSGD+ LGIPFN++ Y+LLTMMLA G + GEF HT+ D H+Y NH E Sbjct: 180 KAGKLNCHLTQRSGDIALGIPFNLSCYALLTMMLAKETGLKVGEFAHTIIDAHIYENHME 239 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R P TLP++ I + D L YE H I +V+V Sbjct: 240 GLKEQLEREPLTLPKVEIADKP--FDQLSFADIKLVDYESHPGIRFEVAV 287 >gi|26353070|dbj|BAC40165.1| unnamed protein product [Mus musculus] Length = 222 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 20/222 (9%) Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 1 IKGYTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 60 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV NG+LSCQ Sbjct: 61 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 120 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 121 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 180 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 181 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 222 >gi|294792888|ref|ZP_06758035.1| thymidylate synthase [Veillonella sp. 6_1_27] gi|294456787|gb|EFG25150.1| thymidylate synthase [Veillonella sp. 6_1_27] Length = 263 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 99/265 (37%), Positives = 149/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ ++++++ Sbjct: 67 WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ ++ MAL PC + V +G L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDL 239 + L M+ V G + G+F H + + H+Y NH + QL+R P++I+NP + D Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARREQALPAPKIIVNPEVKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F ED TL YE + V++ Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAI 263 >gi|262037574|ref|ZP_06011030.1| thymidylate synthase [Leptotrichia goodfellowii F0264] gi|261748396|gb|EEY35779.1| thymidylate synthase [Leptotrichia goodfellowii F0264] Length = 289 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 120/292 (41%), Positives = 162/292 (55%), Gaps = 31/292 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+L++HV+ G + +RT V T STF Y + DLSKGFPLLTTKK+++ S++HEL Sbjct: 1 MKEYLELVKHVLDNGVRKENRTEVDTISTFAYTYKVDLSKGFPLLTTKKMYFNSMLHELF 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP------------------ 102 W+L G+ ++ L IWD WAD++G L YG WR +P Sbjct: 61 WYLTGEEHIKNLRTK-TKIWDAWADEEGRLETAYGRFWRRYPVPEISLDGEVFTDENNKW 119 Query: 103 ---DYDGNVI-DQISSIVQSLR------ADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 + +G ++ DQI I+ +L+ RR IV AWN LPPCH F F Sbjct: 120 TKREKNGQLVFDQIQYIIDTLKEMKTNPNHKNGRRLIVLAWNPGNASISKLPPCHYTFAF 179 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 V +L+C L QRSGD+ LGIPFN+A YSLLTMM+A G++ GEF HT+ D H+Y NH Sbjct: 180 NVLGNRLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEPGEFSHTIIDAHIYENH 239 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 E QL+R P L ++ I +ED L YE H I +V+V Sbjct: 240 IEGLKEQLTREPLKLSKITIADKP--FNELTFEDIKLEDYESHPVIKFEVAV 289 >gi|52080405|ref|YP_079196.1| thymidylate synthase [Bacillus licheniformis ATCC 14580] gi|52785784|ref|YP_091613.1| thymidylate synthase [Bacillus licheniformis ATCC 14580] gi|3122985|sp|Q59212|TYSY_BACLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|62901267|sp|Q65J44|TYSY_BACLD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|1359509|emb|CAA90533.1| thymidylate synthetase [Bacillus licheniformis] gi|52003616|gb|AAU23558.1| thymidylate synthase A [Bacillus licheniformis ATCC 14580] gi|52348286|gb|AAU40920.1| ThyA [Bacillus licheniformis ATCC 14580] Length = 279 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 100/275 (36%), Positives = 153/275 (55%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ +I+ G D T T S +MRFD S+ P+LTTKKV Sbjct: 6 QQYNAIIQKIIESGISDEEYQVRTKWDSDGTPAHTLSIMSEKMRFDNSE-VPILTTKKVA 64 Query: 52 WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-PDYDGNVI 109 WK+ + ELLW + ++V L+ GV IWD+W +DG +G YG Q +G + Sbjct: 65 WKTAIKELLWIWQLKSNDVQVLNDMGVHIWDQWRLEDGTIGAAYGYQLGKKNRTVNGQKV 124 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRH+ WN +D MAL PC Q+YV GKLS ++ RS D Sbjct: 125 DQVDYLLHQLKHNPSSRRHLTMLWNPDDLDGMALTPCVYETQWYVKEGKLSLEVRARSND 184 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V+G++ GE+I +GD H+Y H + ++Q+ R P+ Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVLGYELGEYIFNIGDCHIYTRHIDNLNIQMKREQYEAPK 244 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP+I + F +DF L Y+ + +V+V Sbjct: 245 LWINPDIKNFYDFTIDDFKLIDYKHGDKLTFEVAV 279 >gi|319645637|ref|ZP_07999869.1| thymidylate synthase A [Bacillus sp. BT1B_CT2] gi|317392523|gb|EFV73318.1| thymidylate synthase A [Bacillus sp. BT1B_CT2] Length = 300 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 100/275 (36%), Positives = 153/275 (55%), Gaps = 13/275 (4%) Query: 2 HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 QY +++ +I+ G D T T S +MRFD S+ P+LTTKKV Sbjct: 27 QQYNAIIQKIIESGISDEEYQVRTKWDSDGTPAHTLSIMSEKMRFDNSE-VPILTTKKVA 85 Query: 52 WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-PDYDGNVI 109 WK+ + ELLW + ++V L+ GV IWD+W +DG +G YG Q +G + Sbjct: 86 WKTAIKELLWIWQLKSNDVQVLNDMGVHIWDQWRLEDGTIGAAYGYQLGKKNRTVNGQKV 145 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++ L+ +P SRRH+ WN +D MAL PC Q+YV GKLS ++ RS D Sbjct: 146 DQVDYLLHQLKHNPSSRRHLTMLWNPDDLDGMALTPCVYETQWYVKEGKLSLEVRARSND 205 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG PFN+ Y++L M+A V+G++ GE+I +GD H+Y H + ++Q+ R P+ Sbjct: 206 MALGNPFNVFQYNVLQRMIAQVLGYELGEYIFNIGDCHIYTRHIDNLNIQMKREQYEAPK 265 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + INP+I + F +DF L Y+ + +V+V Sbjct: 266 LWINPDIKNFYDFTIDDFKLIDYKHGDKLTFEVAV 300 >gi|258646536|ref|ZP_05734005.1| thymidylate synthase [Dialister invisus DSM 15470] gi|260403948|gb|EEW97495.1| thymidylate synthase [Dialister invisus DSM 15470] Length = 264 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 104/266 (39%), Positives = 156/266 (58%), Gaps = 12/266 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++++++ GS +RTG+ M+FDL K FP+LTTK V +K+ V E+LW Sbjct: 7 QYLGIIKNILDAGSLGDNRTGMPAYKLPHQIMQFDLEKEFPILTTKFVAFKTSVKEILWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L + +WDEW +DG +G YG Q + Q+ +++++L+ Sbjct: 67 WQKQSNDVRLLQQWNCHVWDEWMQEDGTIGKAYGYQLGKYH--------QVDTLLETLKK 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR +V WNV + MAL PC L + V D+G+L+C L QRSGD+ LG+PFN+A Sbjct: 119 DPQSRRMVVDLWNVKDLPDMALYPCAFLTMWDVSDDGRLNCMLVQRSGDMGLGVPFNMAQ 178 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVD 238 Y+ L M+A V G + G F H + + H+Y NH + QL+R P+ P + +NP++ D Sbjct: 179 YAALVHMIAQVSGLRVGLFTHVINNAHVYRNHVDAMKTQLARLPKAYDAPVLKLNPDVHD 238 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 F+ ED L +Y+ H I +VSV Sbjct: 239 FYDFKPEDIVLENYKHHEKIAMEVSV 264 >gi|254490316|ref|ZP_05103505.1| thymidylate synthase [Methylophaga thiooxidans DMS010] gi|224464449|gb|EEF80709.1| thymidylate synthase [Methylophaga thiooxydans DMS010] Length = 273 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 108/272 (39%), Positives = 153/272 (56%), Gaps = 37/272 (13%) Query: 30 FGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS-------NVSYLHRHGVSIW-- 80 FG +RFDLS+GFP TTK+V+WK+ E+LW L+G S N+ L V IW Sbjct: 2 FGETLRFDLSEGFPAFTTKRVYWKTAFKEMLWMLKGKSKWGTGNPNIRDLLEQNVHIWSE 61 Query: 81 --------------------------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 DE+A + G+LGP+YG QWR+W DG IDQ+S Sbjct: 62 WPHKKYVDETGDDITLKSFEERVLTDDEFASQWGDLGPVYGKQWRAWKTEDGREIDQVSE 121 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFL 172 +++ ++ +P SRR I WNV +D+MALPPCH +QF+VD G +S L QRS D FL Sbjct: 122 VLEQIKNNPTSRRIIFEGWNVGELDQMALPPCHKHYQFFVDPVKGTVSGSLVQRSADTFL 181 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 G+ FN+ + +L+T ++A G+ GE + DVH+Y NH +Q QLSR P+ P+++I Sbjct: 182 GVAFNVCNLALITTLIAEHTGYMPGEIVWYGLDVHVYLNHLDQVREQLSREPKAFPKLVI 241 Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L + +D L Y+PH AI A V++ Sbjct: 242 KSKKKSLFDYTIDDLGLEGYDPHPAIKAPVAI 273 >gi|303228494|ref|ZP_07315325.1| thymidylate synthase [Veillonella atypica ACS-134-V-Col7a] gi|302516852|gb|EFL58763.1| thymidylate synthase [Veillonella atypica ACS-134-V-Col7a] Length = 263 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 101/265 (38%), Positives = 151/265 (56%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL+++ +++ G ++RTG+ T M+FDL + FP+LTTK V +K+ V ELLW Sbjct: 7 QYLNIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + SN V L V +WDEW +DG +G YG Q + Q+ +++++++ Sbjct: 67 WQMQSNDVRKLQDMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP SRR IV+ WN+ + MAL PC + V NG L+C L QRSGD+ LG+PFN A Y Sbjct: 119 DPDSRRMIVTLWNIEDLPDMALQPCAYETLWDVGNGYLNCMLIQRSGDMGLGVPFNTAQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239 + L M+A V G + G+F H + + H+Y NH + QLSR + L P++ +N +I D Sbjct: 179 AALLCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLSRRDQALRAPKIRVNSDITDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 F +D L YE + V+V Sbjct: 239 YEFSPDDIVLEGYEHLGKLAMTVAV 263 >gi|151945700|gb|EDN63941.1| thymidylate synthase [Saccharomyces cerevisiae YJM789] Length = 259 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 113/280 (40%), Positives = 149/280 (53%), Gaps = 48/280 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + +I G R DRTG LL+ + V Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTDAN----------------LLSEQGVK---------- 44 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------DYDGNVIDQIS 113 G+ + YL + G K G+LGP+YG QWR + DY G IDQ+ Sbjct: 45 IWDGNGSREYLDKMGFK-----DRKVGDLGPVYGFQWRHFGAKYKTCDDDYTGQGIDQLK 99 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLY 164 ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV +LSC LY Sbjct: 100 QVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKEGEGSGKPRLSCLLY 159 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y +H + Q+SR+P Sbjct: 160 QRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDALKEQISRNP 219 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 220 RPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 259 >gi|1420229|emb|CAA99267.1| CDC21 [Saccharomyces cerevisiae] Length = 259 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 112/280 (40%), Positives = 149/280 (53%), Gaps = 48/280 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYLDL + +I G R DRTG LL+ + V Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTDAN----------------LLSEQGVK---------- 44 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------DYDGNVIDQIS 113 G+ + YL + G K G+LGP+YG QWR + DY G IDQ+ Sbjct: 45 IWDGNGSREYLDKMGFK-----DRKVGDLGPVYGFQWRHFGAKYKTCDDDYTGQGIDQLK 99 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLY 164 ++ L+ +PY RR I+SAWN A DKMALPPCH QFYV +LSC LY Sbjct: 100 QVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKEGEGSGKPRLSCLLY 159 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS D+ LG+PFNIASY+LLT M+A V+ + GEFIHTLGD H+Y +H + Q++R+P Sbjct: 160 QRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDALKEQITRNP 219 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P++ I ++ D+ F+ DF + Y PH I K+SV Sbjct: 220 RPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 259 >gi|290968843|ref|ZP_06560380.1| thymidylate synthase [Megasphaera genomosp. type_1 str. 28L] gi|290781139|gb|EFD93730.1| thymidylate synthase [Megasphaera genomosp. type_1 str. 28L] Length = 263 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 99/265 (37%), Positives = 147/265 (55%), Gaps = 11/265 (4%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++ +++K G +RTG+ T M+FDL++ FP+LTTK V +K+ V ELLW Sbjct: 7 QYLTIVENILKNGYYADNRTGIPTYKLPHQVMQFDLAEEFPILTTKFVAFKTAVKELLWI 66 Query: 63 LR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + +NV L +WDEW DG +G YG Q R + Q +++ +L+ Sbjct: 67 WQLQSNNVHDLQAMNCHVWDEWMRPDGTIGKAYGYQIRKYK--------QTDTLLHTLKT 118 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 DP +RR IVS WN+ + MAL PC + V++G+L+C L QRSGD+ LG+PFN+ Y Sbjct: 119 DPQNRRMIVSLWNIEDLPDMALEPCAYQTLWDVNDGRLNCLLIQRSGDMGLGVPFNMTQY 178 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR--TLPQMIINPNIVDL 239 ++L ++A V G G F H + + H+Y NH QL+R P + IN NI D Sbjct: 179 AVLVHLIAQVTGLTPGLFTHVINNAHIYENHVAALQTQLARKELAPAAPTLEINKNIKDF 238 Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264 +F ED L Y+ + +V+V Sbjct: 239 YAFTPEDIQLIHYKHLGKLPMEVAV 263 >gi|328912174|gb|AEB63770.1| Thymidylate synthase 1 [Bacillus amyloliquefaciens LL3] Length = 279 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 97/248 (39%), Positives = 145/248 (58%), Gaps = 3/248 (1%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGV 77 D T T S QMRFD S+ P+LTTKKV WK+ + ELLW + ++V+ L++ GV Sbjct: 33 TDGTPAHTLSVISKQMRFDNSE-IPILTTKKVAWKTAIKELLWIWQCKSNDVNELNKMGV 91 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDY-DGNVIDQISSIVQSLRADPYSRRHIVSAWNVA 136 IWD+W +DG +G YG Q +G +DQ+ ++ L+ +P SRRHI + WN Sbjct: 92 HIWDQWKQEDGTIGKAYGYQLGKKNRMLNGEKVDQVDYLIHQLKNNPSSRRHITTLWNPD 151 Query: 137 LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196 +D MAL PC Q+ V GKL +++ RS D+ LG PFN+ Y++L M+A V G++ Sbjct: 152 ELDSMALTPCVYGTQWLVKGGKLHLEVFCRSNDLALGNPFNVFQYNVLQRMIAQVTGYEL 211 Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 GE+I +GD H+Y H + +Q+ R P++ INPN+ D F +DF L +Y+ Sbjct: 212 GEYIFNIGDCHVYTRHIDNLKIQMDREQYEAPELWINPNVKDFYDFTIDDFKLINYKHGD 271 Query: 257 AILAKVSV 264 + +V+V Sbjct: 272 KLYFEVAV 279 >gi|312897560|ref|ZP_07756980.1| thymidylate synthase [Megasphaera micronuciformis F0359] gi|310621412|gb|EFQ04952.1| thymidylate synthase [Megasphaera micronuciformis F0359] Length = 267 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 99/266 (37%), Positives = 150/266 (56%), Gaps = 11/266 (4%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QYL+++ ++++ G ++RTG+ T M+FDL K FP+LTTK V +K+ V ELLW Sbjct: 10 EQYLNIVENILEHGYFDQNRTGIRTYKLPHQMMQFDLEKEFPILTTKFVAFKTAVKELLW 69 Query: 62 FLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 + ++V L + +WDEW +DG +G YG Q R + Q+ +++ LR Sbjct: 70 IWQLQSNDVRELQKMNCHVWDEWMREDGTIGKAYGYQIRKYK--------QVDTLLDQLR 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP +RR IVS WN+ + MAL PC + V +G+L+C L QRSGD+ LGIPFN+ Sbjct: 122 TDPQNRRMIVSLWNIEDLPDMALQPCAYQTLWDVSDGRLNCMLVQRSGDMGLGIPFNMTQ 181 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SRSPRTLPQMIINPNIVD 238 Y++L ++A +G + G F H + + H+Y NH E QL R PQ++I+ I D Sbjct: 182 YAVLVHLIARSVGLRPGLFTHVINNAHIYENHVEALKTQLARRREALPAPQLVIDEGITD 241 Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264 FR E+ L Y + +V+V Sbjct: 242 FYEFRPENIRLEGYTHKGKLPMEVAV 267 >gi|213159274|ref|YP_002321317.1| thymidylate synthase/pyrimidine hydroxymethylase-like protein [Oryctes rhinoceros virus] gi|108515120|gb|ABF93345.1| putative thymidylate synthase [Oryctes rhinoceros virus] gi|202073460|gb|ACH96136.1| thymidylate synthase/pyrimidine hydroxymethylase-like protein [Oryctes rhinoceros virus] Length = 321 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 127/293 (43%), Positives = 177/293 (60%), Gaps = 31/293 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 YL L+R V+K S +RTG+ RS+FG+Q+RFDL G PLLTTK + +K+++ EL Sbjct: 30 RNYLSLVRTVLKAPSS-PNRTGIDARSSFGHQLRFDLRNGVLPLLTTKPMPFKTILRELF 88 Query: 61 WFLRGDSNVSYLHRHGVSIWD-------------EWADKDGELGPIYGVQWRSWP----- 102 WFLRG++N L R V IW + LGPIYG QWR + Sbjct: 89 WFLRGETNQKILERQNVHIWKGNSSREYLDSRGLYDYTEYESLGPIYGFQWRHFGASYVD 148 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NG 157 DY +DQ+ ++++++ DP SRR I+SAWN +DKMALPPCH L QF+V+ NG Sbjct: 149 CNTDYTNKGVDQLQQVIRTIKEDPTSRRIIMSAWNPVDLDKMALPPCHILVQFHVNTVNG 208 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 +LS QLYQRS D+ LG+PFNIASYS+L ++A + G + G FIH+LGDVH+Y NH A Sbjct: 209 ELSAQLYQRSADLMLGVPFNIASYSILVHLIAKICGLKPGYFIHSLGDVHIYENHVSGAK 268 Query: 218 LQLSRSPRTLPQMIINPNIV-DLLSF----RYEDFTLRSYEPHA-AILAKVSV 264 QL+R P+ P + I+ + DL S + F L +Y+ + I +++V Sbjct: 269 EQLTREPQRQPYLNIDIDPTLDLDSILEQLSCDQFKLVNYKYNPNPIKLEMAV 321 >gi|70733180|ref|YP_262953.1| thymidylate synthase [Pseudomonas fluorescens Pf-5] gi|68347479|gb|AAY95085.1| thymidylate synthase [Pseudomonas fluorescens Pf-5] Length = 323 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 112/323 (34%), Positives = 166/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HVI G+ + +RTGV T S G +R+DL +GFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVAHVINNGTKQANRTGVNTISFPGAMLRYDLKEGFPAITTRKMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDY---- 104 FLRG +N + G +WD+ A++ D +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGDDDLGEIYGVQWRKWPAYKQIK 120 Query: 105 -----------------------DGNV-------IDQISSIVQSLRADPYSRRHIVSAWN 134 DG IDQ+ V ++ DP SRR + WN Sbjct: 121 TSNQAAIDLALSQGYRQIAAGEEDGQGYVVLYKAIDQVRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + QL R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPFPMPKLVISERVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L YE HA + A ++V Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323 >gi|197303683|ref|ZP_03168720.1| hypothetical protein RUMLAC_02412 [Ruminococcus lactaris ATCC 29176] gi|197297203|gb|EDY31766.1| hypothetical protein RUMLAC_02412 [Ruminococcus lactaris ATCC 29176] Length = 301 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 89/279 (31%), Positives = 136/279 (48%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++++ R +I+ G+ D T T FG R+DLSK FP LT ++ Sbjct: 25 KVFINMCRDIIENGTSTEGEKVRPKWEDGTAAYTIKKFGVVNRYDLSKEFPALTLRRTAI 84 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS V ELLW + SN +H IWD WAD++G +G YG Q + Y ++DQ+ Sbjct: 85 KSCVDELLWIWQKKSN--NVHELKSHIWDSWADENGSIGKAYGYQMQVKHQYKEGMMDQV 142 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166 ++ L+ +PYSRR + + + + +M L PC F V + L+ L QR Sbjct: 143 DRVLYDLKENPYSRRIMTNLYVHEDLHEMNLYPCAYSMTFNVTKEEGSEQLTLNGILNQR 202 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV +N+ Y++L M A V G + GE +H + D H+Y+ H + +SR P Sbjct: 203 SQDVLTANNWNVCQYAVLLHMFAQVCGMKAGELVHVIADAHIYDRHIPLIEELISREPLP 262 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P+ +NP + D F +D L YE H I V++ Sbjct: 263 APKFWLNPEVKDFYDFTPDDVRLEDYETHPQIKNIPVAI 301 >gi|313501116|gb|ADR62482.1| ThyA [Pseudomonas putida BIRD-1] Length = 323 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 109/323 (33%), Positives = 158/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105 FLRG N G +WD+ A++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L + + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241 G+ F + +GD H+Y NH + + QL R P P+++I+ + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPSFAETGKYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF L YE HA + A ++V Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323 >gi|330806918|ref|YP_004351380.1| Thymidylate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375026|gb|AEA66376.1| Thymidylate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 323 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 110/323 (34%), Positives = 168/323 (52%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HVIK G+ + +RTGV T S G +R+DL GFP +TT+K+ +KS + E+ Sbjct: 1 MKQYLDLVAHVIKNGTKQANRTGVNTISFPGAMLRYDLKDGFPAITTRKMAFKSAIGEMC 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG-- 106 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGEDDLGEIYGVQWRKWPAYKQIP 120 Query: 107 --------------------------------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ V ++ DP SRR + WN Sbjct: 121 LSNPAAIEQTLAQGYRQIAEGEENGQAYVVLYKAIDQVRQCVDTIIKDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS---FRYE---- 245 G+ F + +GD H+Y NH + + QL+R P +P+++I+ + + ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLTREPFPMPKLVISERVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y+ HA + A ++V Sbjct: 301 VEPSDFSLEGYQHHAPMTAPMAV 323 >gi|328553060|gb|AEB23552.1| thymidylate synthase [Bacillus amyloliquefaciens TA208] Length = 279 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 95/248 (38%), Positives = 145/248 (58%), Gaps = 3/248 (1%) Query: 19 RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGV 77 D T T S QMRFD S+ P+LTTKKV WK+ + ELLW + ++V+ L++ GV Sbjct: 33 TDGTPAHTLSVISKQMRFDNSE-VPILTTKKVAWKTAIRELLWIWQLKSNDVNELNKMGV 91 Query: 78 SIWDEWADKDGELGPIYGVQWRSWPDY-DGNVIDQISSIVQSLRADPYSRRHIVSAWNVA 136 IWD+W +DG +G YG Q +G +DQ+ ++ L+ +P SRRHI + WN Sbjct: 92 HIWDQWKQEDGTIGKAYGYQLGKKNRMLNGEKVDQVDYLIHQLKNNPSSRRHITTLWNPD 151 Query: 137 LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196 +D MAL PC Q+ + GKL +++ RS D+ LG PFN+ Y++L M+A V G++ Sbjct: 152 ELDSMALTPCVYGTQWLIKGGKLHLEVFCRSSDLALGNPFNVFQYNVLQRMIAQVTGYEL 211 Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 GE+I +GD H+Y H + +Q+ R P++ INP++ D F +DF L +Y+ Sbjct: 212 GEYIFNIGDCHVYTRHIDNLKIQMDREQHEAPELWINPDVKDFYDFTIDDFKLINYKHGD 271 Query: 257 AILAKVSV 264 + +V+V Sbjct: 272 KLYFEVAV 279 >gi|170719511|ref|YP_001747199.1| thymidylate synthase [Pseudomonas putida W619] gi|169757514|gb|ACA70830.1| Thymidylate synthase [Pseudomonas putida W619] Length = 323 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 110/323 (34%), Positives = 159/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI+ G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIENGTLQENRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105 FLRG N G +WD+ A++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNPAAIEMAEKAGFRRIAQDEEDGQAFVVLYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V ++S LY RS D+ LG PFN+ + L + + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP-----------NIVDLLS 241 G+ F + +GD H+Y NH + + QL R P P+++I+ L Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L YE HA + A ++V Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323 >gi|77461594|ref|YP_351101.1| thymidylate synthase [Pseudomonas fluorescens Pf0-1] gi|77385597|gb|ABA77110.1| thymidylate synthase [Pseudomonas fluorescens Pf0-1] Length = 323 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 111/323 (34%), Positives = 166/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+ HVI G+ + +RTGV T S G +RFDL +GFP +TT+K+ +KS + E+ Sbjct: 1 MKQYLDLVSHVINNGTKQANRTGVNTISFPGAMLRFDLQEGFPAITTRKMAFKSAIGEMC 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG-- 106 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGEDDLGEIYGVQWRKWPAYKQIP 120 Query: 107 --------------------------------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ V ++ DP SRR + WN Sbjct: 121 LSNTAAIEQTLSNGYKQIAQGEEDGQAYVVLYKAIDQVRQCVDTIIKDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS---FRYE---- 245 G+ F + +GD H+Y NH + + QL R P +P++ I+ + + ++ E Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPFAMPKLKISDRVPEFAKTGVYQPEWLEL 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L YE HA + A ++V Sbjct: 301 VEPSDFSLEGYEHHAPMTAPMAV 323 >gi|28872394|ref|NP_795013.1| thymidylate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|62901368|sp|Q87UL4|TYSY_PSESM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|28855649|gb|AAO58708.1| thymidylate synthase [Pseudomonas syringae pv. tomato str. DC3000] Length = 323 Score = 270 bits (692), Expect = 9e-71, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG SN + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI + ++ DP SRR + WN Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y+ H A+ A ++V Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323 >gi|330987229|gb|EGH85332.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 323 Score = 270 bits (692), Expect = 9e-71, Method: Composition-based stats. Identities = 106/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEGGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323 >gi|237802256|ref|ZP_04590717.1| thymidylate synthase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025113|gb|EGI05169.1| thymidylate synthase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 323 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 107/323 (33%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG SN + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323 >gi|213971428|ref|ZP_03399541.1| thymidylate synthase [Pseudomonas syringae pv. tomato T1] gi|301382144|ref|ZP_07230562.1| thymidylate synthase [Pseudomonas syringae pv. tomato Max13] gi|302060081|ref|ZP_07251622.1| thymidylate synthase [Pseudomonas syringae pv. tomato K40] gi|302132390|ref|ZP_07258380.1| thymidylate synthase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923789|gb|EEB57371.1| thymidylate synthase [Pseudomonas syringae pv. tomato T1] Length = 323 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG SN + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI + ++ DP SRR + WN Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFARTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y+ H A+ A ++V Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323 >gi|66048064|ref|YP_237905.1| thymidylate synthase [Pseudomonas syringae pv. syringae B728a] gi|63258771|gb|AAY39867.1| Thymidylate synthase [Pseudomonas syringae pv. syringae B728a] Length = 323 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 106/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLGL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323 >gi|71735199|ref|YP_276964.1| thymidylate synthase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483848|ref|ZP_05637889.1| thymidylate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624869|ref|ZP_06457823.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650714|ref|ZP_06482057.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str. 2250] gi|289672056|ref|ZP_06492946.1| thymidylate synthase [Pseudomonas syringae pv. syringae FF5] gi|298489271|ref|ZP_07007288.1| Thymidylate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71555752|gb|AAZ34963.1| thymidylate synthase [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156235|gb|EFH97338.1| Thymidylate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320326279|gb|EFW82332.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. B076] gi|320331721|gb|EFW87659.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330869197|gb|EGH03906.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330872473|gb|EGH06622.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330940592|gb|EGH43640.1| thymidylate synthase [Pseudomonas syringae pv. pisi str. 1704B] gi|330982261|gb|EGH80364.1| thymidylate synthase [Pseudomonas syringae pv. aptata str. DSM 50252] gi|331012059|gb|EGH92115.1| thymidylate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 323 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 106/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323 >gi|302188010|ref|ZP_07264683.1| thymidylate synthase [Pseudomonas syringae pv. syringae 642] Length = 323 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISERVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y+ H A+ A ++V Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323 >gi|127511974|ref|YP_001093171.1| thymidylate synthase [Shewanella loihica PV-4] gi|166231732|sp|A3QBR4|TYSY_SHELP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|126637269|gb|ABO22912.1| thymidylate synthase [Shewanella loihica PV-4] Length = 283 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58 M QYL L +I G +RTG + + +D++ FPL+TT+K WK + E Sbjct: 1 MKQYLALCERIINEGVWVENERTGKRCLTVINADLEYDVAANEFPLITTRKSFWKGAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106 LL +LRG N + + G WD A++ ++G +YGVQ R+W DG Sbjct: 61 LLGYLRGYDNAADFRKLGAKTWDANANENSAWLNNPHRKGHDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 V+DQ+ I+ +L R I+S +N L PC F + L +QR Sbjct: 121 GVVDQLRKIIDNLSKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL-QLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + QL R P Sbjct: 181 SCDVPLGLNFNQVQVFALLSIVAQITGHKPGKAYHKIVNAHIYEDQLPLMQEVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + Y+ H AI SV Sbjct: 241 PSPKLSINPDIKSLEDLETWVTMDDFEVTGYQHHEAIQYPFSV 283 >gi|330972999|gb|EGH73065.1| thymidylate synthase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 323 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y+ H A+ A ++V Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323 >gi|104784144|ref|YP_610642.1| thymidylate synthase [Pseudomonas entomophila L48] gi|95113131|emb|CAK17859.1| thymidylate synthase (TS) (TSase) [Pseudomonas entomophila L48] Length = 323 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 109/323 (33%), Positives = 159/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIDNGTLQENRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105 FLRG N G +WD+ A++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNPAAIEMAEKAGFRRIAQDEEDGQAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L + + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP-----------NIVDLLS 241 G+ F + +GD H+Y NH + + Q+ R P P+++I+ L Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMKREPLAAPKLVISDRVPAFAKTGKYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L YE HA + A ++V Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323 >gi|330954749|gb|EGH55009.1| thymidylate synthase [Pseudomonas syringae Cit 7] Length = 323 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 106/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMNREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323 >gi|26991817|ref|NP_747242.1| thymidylate synthase [Pseudomonas putida KT2440] gi|62901369|sp|Q88CN9|TYSY_PSEPK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|24986931|gb|AAN70706.1|AE016714_4 thymidylate synthase [Pseudomonas putida KT2440] Length = 323 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 110/323 (34%), Positives = 158/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105 FLRG N G +WD+ A++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L + + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP-----------NIVDLLS 241 G+ F + +GD H+Y NH + + QL R P P+++I+ L Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF L YE HA + A ++V Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323 >gi|167036181|ref|YP_001671412.1| thymidylate synthase [Pseudomonas putida GB-1] gi|166862669|gb|ABZ01077.1| Thymidylate synthase [Pseudomonas putida GB-1] Length = 323 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 110/323 (34%), Positives = 158/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI+ G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIENGTMQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105 FLRG N G +WD+ A++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNSAAIEMAEKAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ LG PFN+ + L + + Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP-----------NIVDLLS 241 G+ F + +GD H+Y NH + QL R P P+++I+ L Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLHEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF L YE HA + A ++V Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323 >gi|332289795|ref|YP_004420647.1| thymidylate synthase [Gallibacterium anatis UMN179] gi|330432691|gb|AEC17750.1| thymidylate synthase [Gallibacterium anatis UMN179] Length = 283 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G + RTG + + ++++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLDLCQRIIDEGVWVENQRTGKRCLTVIDASLTYNVADNEFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YGVQ RSW +G Sbjct: 61 LLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPYRKGEDDMGRVYGVQGRSWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV L R I++ +N I++ L PC F + L YQR Sbjct: 121 ETVDQLRKIVNDLSKGIDDRGEILTFYNPGEIEQGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + D QL R P Sbjct: 181 SCDVPLGLTFNQIQVFTFLALMAQITGHKPGKAFHKIINAHIYEDQLPLMRDEQLKREPY 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LPQ+ INP+I L +DF + +Y+ H AI SV Sbjct: 241 PLPQLEINPDIKTLEDLETWVTLDDFKVHNYQCHPAIKYPFSV 283 >gi|300312740|ref|YP_003776832.1| thymidylate synthetase [Herbaspirillum seropedicae SmR1] gi|300075525|gb|ADJ64924.1| thymidylate synthetase protein [Herbaspirillum seropedicae SmR1] Length = 323 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 108/323 (33%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL++ V++ GS + +RTG+ T S G MRFDL KGFP +TTK++ +KSVV EL Sbjct: 1 MKQYQDLIQDVLENGSWQDNRTGIRTLSIPGAMMRFDLQKGFPAVTTKRLAFKSVVGELC 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD+ A+++ +LGP+YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDQNANENADWLANPFRSGADDLGPVYGVQWRQWPAYKLID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 +DQ+ + ++ +P SRR + WN Sbjct: 121 AAHTTQIEAARSKGFAIVSSLQDEGVEKVLLYKAVDQLRECLDTIVNNPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF G++S LY RS D+ LG PFN+A + L ++A + Sbjct: 181 CAVLDEVALPACHLLYQFLPNQSTGEISLCLYVRSNDIGLGTPFNLAEGAALLHLVARLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241 G++ F + +GD H+Y NH + QL+R+P LPQ+ I + + Sbjct: 241 GYKPRWFSYFVGDAHIYENHIDMVKEQLTRAPYPLPQLEIADRVPEFARTGRYEPQWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L +Y+ HA + A ++V Sbjct: 301 VEPSDFSLVNYQHHAPLTAPMAV 323 >gi|326483245|gb|EGE07255.1| thymidylate synthase [Trichophyton equinum CBS 127.97] Length = 310 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 115/292 (39%), Positives = 148/292 (50%), Gaps = 50/292 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48 HQYL+L+R +I G R DRTG GTRS F Q+RF LSK PLLTTK Sbjct: 40 HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV 108 +V ++V+ ELLWF+ G ++ L G+ IWD +G + V D Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDG----NGSREFLDSVGLSHREVGDLGP 155 Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------------- 155 + R I+SAWN A + KMALPPCH QFYV Sbjct: 156 V-----------------RIILSAWNPADLKKMALPPCHMFAQFYVSFPPQKAGDEGKKG 198 Query: 156 NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 G LSC LYQRS D+ LG+PFNIASY+LLT M A G FIHT+GD H+Y +H E Sbjct: 199 KGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPGTFIHTMGDAHVYLDHIEA 258 Query: 216 ADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL+R P P + IN ++ ++ DF + Y+PH I K+S+ Sbjct: 259 LQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDYKPHKLIKMKMSI 310 >gi|330874141|gb|EGH08290.1| thymidylate synthase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 323 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAQFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQPFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y+ H A+ A ++V Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323 >gi|225568619|ref|ZP_03777644.1| hypothetical protein CLOHYLEM_04696 [Clostridium hylemonae DSM 15053] gi|225162547|gb|EEG75166.1| hypothetical protein CLOHYLEM_04696 [Clostridium hylemonae DSM 15053] Length = 282 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 97/279 (34%), Positives = 134/279 (48%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++D+ R +I G+D D T T FG R+DLSK FP LT ++ Sbjct: 6 KVFIDMCRDIIDNGTDTKGEKVRPVWEDGTPAYTVKKFGVVNRYDLSKEFPALTLRRTGI 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS ELLW + SN +H IWD WAD+DG +G YG Q Y + DQI Sbjct: 66 KSCTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMGVKHQYKEGMFDQI 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166 ++ L+ +PYSRR + + + + +MAL PC F V K L+ L QR Sbjct: 124 DRVIYDLKHNPYSRRIMTNLYVHQDLHEMALYPCAYSMTFNVTKEKGSDRLTLNGILNQR 183 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV +N+ YS+L MLA V G + GEF+H + D H+Y+ H + ++R P Sbjct: 184 SQDVLAANNWNVCQYSVLLHMLAQVCGMKAGEFVHVIADAHIYDRHIPMIEELIAREPLP 243 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P +NP I D F +D L Y H I V+V Sbjct: 244 APAFWLNPEIKDFYEFTRDDVKLIDYNTHEQIKNIPVAV 282 >gi|88797182|ref|ZP_01112772.1| thymidylate synthase [Reinekea sp. MED297] gi|88780051|gb|EAR11236.1| thymidylate synthase [Reinekea sp. MED297] Length = 283 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58 M QYL+L + +I G +RTG + + +D+ FPL+TT+K ++K+ + E Sbjct: 1 MKQYLELCQRIIDEGVWVENERTGKRCLTVINADLEYDVEHNQFPLITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 FLGYIRGYDNAADFRKLGARTWDANANDNQAWLNNPHRNGTDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV L R I+S +N L PC F V +GKL YQR Sbjct: 121 GSVDQLQKIVDHLSKGMDDRGEILSFYNPGEFHMGCLRPCMHTHTFSVLDGKLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFFFLAIMAQITGLKPGKAYHKIVNAHIYEDQLELMRDVQLKREPY 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P+++INP+I L +DF++ Y+ H I SV Sbjct: 241 PSPKLVINPDIRSLKDLETWVTMDDFSVEGYQHHDPIAYPFSV 283 >gi|254252890|ref|ZP_04946208.1| Thymidylate synthase [Burkholderia dolosa AUO158] gi|124895499|gb|EAY69379.1| Thymidylate synthase [Burkholderia dolosa AUO158] Length = 323 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 104/323 (32%), Positives = 158/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQEGFPAVTTKKLAFKSAIGELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+++ +LG +YGVQWR WP Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P+++I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLVIADRVPDYAKTGVYGPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|290563146|ref|NP_001166836.1| thymidylate synthase isoform 2 [Bombyx mori] gi|87248621|gb|ABD36363.1| thymidylate synthase isoform 2 [Bombyx mori] Length = 255 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 106/228 (46%), Positives = 140/228 (61%), Gaps = 20/228 (8%) Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS---- 100 ELLW + G ++ L GV IWD ++ G+LGP+YG QWR Sbjct: 28 EELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAK 87 Query: 101 ----WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN 156 DY G IDQ+ S++ S++ +P RR ++ AWN + + KMALPPCHCL QFYV + Sbjct: 88 YIDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFYVAD 147 Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 GKLSC LYQRS D+ LG+PFNIASYSLLT M+A V G+Q GEFIHT GD H+Y NH E Sbjct: 148 GKLSCLLYQRSADMGLGVPFNIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPL 207 Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +QL R P+ P + I + F+YEDF ++ Y+PH I +++V Sbjct: 208 KIQLQREPKQFPTLEFARKIESIDDFKYEDFIIKDYKPHPKIEMEMAV 255 >gi|284504438|ref|YP_003407153.1| bifunctional dihydrofolate reductase-thymidylate synthase [Marseillevirus] gi|282935876|gb|ADB04191.1| bifunctional dihydrofolate reductase-thymidylate synthase [Marseillevirus] Length = 444 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 110/280 (39%), Positives = 155/280 (55%), Gaps = 20/280 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL LL V+ G R+DRTG GTRS FG + F ++S+ FPL+T K++ W ++ ELLWF Sbjct: 164 YLSLLSEVLYSGEKRKDRTGTGTRSLFGRHLLFENISEKFPLITVKRMAWGCILSELLWF 223 Query: 63 LRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWRSWP--------D 103 L G ++ L +IW + + + +G+ GPIYG QWR W D Sbjct: 224 LSGSTDSKMLELQNNNIWKKNSSRKFLDGRGLSYREGDCGPIYGFQWRHWGAKYVDCDTD 283 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y G DQI SI+ ++ + SRR ++SAWNV+ +DKM LPPCH QFYV + C L Sbjct: 284 YRGQGEDQILSIISEIQNNATSRRLVLSAWNVSDLDKMCLPPCHSFSQFYVRGDFVDCHL 343 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIASY+ L ++A G + G + GDVH+Y H + A L R Sbjct: 344 YQRSADLALGVPFNIASYACLLSIIAEASGKKAGNLTMSFGDVHIYETHIDNAQKMLERL 403 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P P++ + + L + DF L Y A+ ++ Sbjct: 404 PHKTPKLKVKISDNTLFCLKKGDFELDGYSCCGALQFDMA 443 >gi|206590566|emb|CAQ37528.1| probable thymidylate synthase (partial sequence c terminus) protein [Ralstonia solanacearum MolK2] Length = 415 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 106/182 (58%), Positives = 132/182 (72%) Query: 83 WADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 WAD DGELGPIYG QWRSWP G IDQI+ ++ ++ +P SRR IVSAWNV I +M Sbjct: 234 WADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIKRNPDSRRLIVSAWNVGDIPRMK 293 Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 LPPCH FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A G G+F+ T Sbjct: 294 LPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAQQTGLDVGDFVWT 353 Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 GD HLYNNHFEQ + QL+R+P LP++ I + +++EDF + Y+ HAAI A V Sbjct: 354 GGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIFDYQFEDFEIVGYQSHAAIKAPV 413 Query: 263 SV 264 +V Sbjct: 414 AV 415 >gi|145632282|ref|ZP_01788017.1| thymidylate synthase [Haemophilus influenzae 3655] gi|145634072|ref|ZP_01789783.1| thymidylate synthase [Haemophilus influenzae PittAA] gi|144987189|gb|EDJ93719.1| thymidylate synthase [Haemophilus influenzae 3655] gi|145268516|gb|EDK08509.1| thymidylate synthase [Haemophilus influenzae PittAA] Length = 283 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|166031149|ref|ZP_02233978.1| hypothetical protein DORFOR_00834 [Dorea formicigenerans ATCC 27755] gi|166028996|gb|EDR47753.1| hypothetical protein DORFOR_00834 [Dorea formicigenerans ATCC 27755] Length = 291 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 18/277 (6%) Query: 4 YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ R +I G+D D+T T F R+DLSK FP LT ++ KS Sbjct: 17 FIDMCRDIIDNGTDTRGEKVRPVWEDKTPAYTVKKFCVVNRYDLSKEFPALTLRRTAIKS 76 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 ELLW + SN +H IWD WAD+DG +G YG Q Y + DQ+ Sbjct: 77 CTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMSVKHQYKEGMFDQVDR 134 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168 ++ L+ +PYSRR + + + + +M L PC F V + L+ L QRS Sbjct: 135 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKEGHEKLSLNGMLNQRSN 194 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV +N+ Y++L MLA V + GE +H + D H+Y+ H + + R P P Sbjct: 195 DVLTANNWNVCQYAVLLHMLAQVCDMEVGELVHVIADAHIYDRHIPLVEELIKREPLPAP 254 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 + +NP + + F +D L YE H I V+V Sbjct: 255 KFWLNPEVKNFYDFTPDDVKLIDYETHEQIKNIPVAV 291 >gi|269103430|ref|ZP_06156127.1| thymidylate synthase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163328|gb|EEZ41824.1| thymidylate synthase [Photobacterium damselae subsp. damselae CIP 102761] Length = 283 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 92/283 (32%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RTG + + +D++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLNLCQRIVDDGVWVENERTGKRCLTVISADLTYDVANNQFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ D ++G +YGVQ RSW DG Sbjct: 61 LLGYIRGYDNAADFRALGTKTWDMNANDNQAWLNNPHRKGDDDMGRVYGVQGRSWRKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ IV L R I++ +N D L PC F + L YQR Sbjct: 121 STLDQLRKIVDDLSRGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTLLALMAQITGKKPGQAYHKIINAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ+ INPNI L +DF + YE H I SV Sbjct: 241 PSPQLKINPNIKSLEDLETWVTMDDFEVIGYEHHEPIKYPFSV 283 >gi|229844040|ref|ZP_04464181.1| thymidylate synthase [Haemophilus influenzae 6P18H1] gi|229813034|gb|EEP48722.1| thymidylate synthase [Haemophilus influenzae 6P18H1] Length = 283 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLMKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|301154747|emb|CBW14210.1| thymidylate synthetase [Haemophilus parainfluenzae T3T1] Length = 283 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLSRGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGNKPGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + Y+ H I SV Sbjct: 241 PSPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|56459618|ref|YP_154899.1| thymidylate synthase [Idiomarina loihiensis L2TR] gi|62901214|sp|Q5R064|TYSY_IDILO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|56178628|gb|AAV81350.1| Thymidylate synthase [Idiomarina loihiensis L2TR] Length = 283 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G + +RTG+ + + +D++ FPL+TT+K ++KS + E Sbjct: 1 MKQYLQLCQRIVDEGVWVKNERTGINCLTVINADLEYDVANNQFPLITTRKSYYKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG ++ + G WD A+++ ++G +YGVQ RSW DG Sbjct: 61 LLGYLRGYNSAAQFRDIGCKTWDANANENQAWLNNPNRKGEDDMGRVYGVQGRSWQKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ ++ +L R IV+ +N + L PC F + L YQR Sbjct: 121 SHLDQLKKVINNLSKGIDDRGEIVTFYNPGEFELGCLRPCMHTHNFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y N E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFALLALVAQITGHKPGKAYHKIVNAHIYENQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + Y+ H I +V Sbjct: 241 PSPQLHINPEIKSLEDIETWVSKDDFIVSGYQCHDPIKYPFAV 283 >gi|254670154|emb|CBA05192.1| Thymidylate synthase [Neisseria meningitidis alpha153] Length = 189 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 114/185 (61%), Positives = 137/185 (74%), Gaps = 10/185 (5%) Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 WD + +G +GP DG IDQI+++V+ ++ +P SRR IVSAWN AL+D Sbjct: 15 WDRFTATNGAVGPAP----------DGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVD 64 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 +MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G + GEF Sbjct: 65 EMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEF 124 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 IHT GD HLY NHFEQA+LQL R PRTLP M INP + DL SF++EDF L Y+PH I Sbjct: 125 IHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLFSFKFEDFELEGYDPHPHIK 184 Query: 260 AKVSV 264 A VSV Sbjct: 185 AAVSV 189 >gi|148828083|ref|YP_001292836.1| thymidylate synthase [Haemophilus influenzae PittGG] gi|166231706|sp|A5UI47|TYSY_HAEIG RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|148719325|gb|ABR00453.1| thymidylate synthase [Haemophilus influenzae PittGG] Length = 283 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIVSEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRELGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|145641907|ref|ZP_01797481.1| thymidylate synthase [Haemophilus influenzae R3021] gi|145273386|gb|EDK13258.1| thymidylate synthase [Haemophilus influenzae 22.4-21] Length = 283 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGIDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGETLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKRAGKAYHKIVNAHIYEDQLELMRDVQLKRKPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKSLEDLETWVTMDDFKVIGYQSHEPIKYPFSV 283 >gi|307730580|ref|YP_003907804.1| thymidylate synthase [Burkholderia sp. CCGE1003] gi|307585115|gb|ADN58513.1| thymidylate synthase [Burkholderia sp. CCGE1003] Length = 323 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ +P RR + AWN Sbjct: 121 ASASAQLADASARGFQVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ ++L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARREISLCLYIRSNDVGLGTPFNLTEGAVLLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 GF F + +GD H+Y N + + QL+R P P + I+ + + L Sbjct: 241 GFTPRWFTYFIGDAHIYENQLDMLNQQLTREPYESPTLAISERVPEYAKTGVYAPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|330961919|gb|EGH62179.1| thymidylate synthase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 322 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 105/322 (32%), Positives = 165/322 (51%), Gaps = 59/322 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG SN + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241 G+ F + +GD H+Y NH + + Q++R P ++P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYSMPKLVISDRVPEFAKTGVYQPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVS 263 DF+L Y+ H A+ A ++ Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMA 322 >gi|85713217|ref|ZP_01044245.1| thymidylate synthase [Idiomarina baltica OS145] gi|85692960|gb|EAQ30930.1| thymidylate synthase [Idiomarina baltica OS145] Length = 283 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 90/283 (31%), Positives = 141/283 (49%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58 M QYL L + +I G + RTG+ + + +D+ FPL+TT+K ++K+ + E Sbjct: 1 MKQYLQLCQRIIDEGEWVHNARTGINCLTVINADLEYDVEHNQFPLITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG + + G + W+ A+++ ++G +YGVQ R+W DG Sbjct: 61 LLGYLRGYDSAAQFRDIGCNTWNANANENASWLANPHRKGPDDMGRVYGVQGRAWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + DQ+ +V L R IV+ +N +D L PC F + NGKL YQR Sbjct: 121 SQFDQLQKVVDDLTQGIDDRGEIVTFYNPGELDMGCLRPCMHTHTFSLLNGKLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVARITGHKPGKVFHKIVNAHIYENQLELMRDVQLKREPY 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 PQ+ INP+I L +DF++ Y+ H I +V Sbjct: 241 PSPQLHINPDIKTLQDIETWVTKDDFSIEGYQHHPPIKYPFAV 283 >gi|145638274|ref|ZP_01793884.1| thymidylate synthase [Haemophilus influenzae PittII] gi|148826451|ref|YP_001291204.1| thymidylate synthase [Haemophilus influenzae PittEE] gi|229845956|ref|ZP_04466068.1| thymidylate synthase [Haemophilus influenzae 7P49H1] gi|166231705|sp|A5UDH0|TYSY_HAEIE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145272603|gb|EDK12510.1| thymidylate synthase [Haemophilus influenzae PittII] gi|148716611|gb|ABQ98821.1| thymidylate synthase [Haemophilus influenzae PittEE] gi|229810960|gb|EEP46677.1| thymidylate synthase [Haemophilus influenzae 7P49H1] gi|309751428|gb|ADO81412.1| Thymidylate synthetase [Haemophilus influenzae R2866] gi|309973598|gb|ADO96799.1| Thymidylate synthetase [Haemophilus influenzae R2846] Length = 283 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIVSEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|154505857|ref|ZP_02042595.1| hypothetical protein RUMGNA_03398 [Ruminococcus gnavus ATCC 29149] gi|153793875|gb|EDN76295.1| hypothetical protein RUMGNA_03398 [Ruminococcus gnavus ATCC 29149] Length = 272 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 90/274 (32%), Positives = 132/274 (48%), Gaps = 18/274 (6%) Query: 7 LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 + R +I G+ D T T FG R+DLSK FP LT ++ KS V Sbjct: 1 MCRDIIDNGTSTEGEKVRPVWEDGTSAYTIKKFGIVNRYDLSKEFPALTLRRTGIKSCVD 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E+LW + SN +H IWD WAD+DG +G YG Q + Y ++DQ+ ++ Sbjct: 61 EMLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMQVKHQYKEGMMDQVDRVIY 118 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGDVF 171 L+ +PYSRR + + + + +M L PC F V K L+ L QRS DV Sbjct: 119 DLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEKDSDKLTLNGILNQRSQDVL 178 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 +N+ Y++L MLA V + GEF+H + D H+Y+ H + + R P P+ Sbjct: 179 AANNWNVCQYAVLLHMLAQVCDMKVGEFVHVIADAHIYDRHIPMIEELIKREPLPAPKFW 238 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 +NP + D F +D L YE H I ++V Sbjct: 239 LNPEVKDFYEFTPDDVRLDGYETHPQIKNIPIAV 272 >gi|170700986|ref|ZP_02891968.1| Thymidylate synthase [Burkholderia ambifaria IOP40-10] gi|170134126|gb|EDT02472.1| Thymidylate synthase [Burkholderia ambifaria IOP40-10] Length = 323 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+ + +LG +YGVQWR WP Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRVVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|163858352|ref|YP_001632650.1| thymidylate synthase [Bordetella petrii DSM 12804] gi|163262080|emb|CAP44382.1| thyA [Bordetella petrii] Length = 323 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 104/323 (32%), Positives = 159/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++ ++ GS + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLSLIQSILDHGSWQENRTGIRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 F+RG + + G +WD+ A+++ +LGP+YGVQWR WP Y Sbjct: 61 GFMRGARSAADFRALGCKVWDQNANENANWLANPYREGPDDLGPVYGVQWRRWPAYKLLP 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 +DQ+ + ++ ++P RR + WN Sbjct: 121 LANDAQIRDALGRGYAQVAQLDENGAPHVLLYKAVDQLRQCLDTIHSNPQDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y NH QL+R P P+++++ I D L Sbjct: 241 GYTPRWFSYFIGDAHIYENHLPMLREQLTREPYEAPRLVLSDRIPDYAVTGRYEPQWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF L Y+ H A+ A ++V Sbjct: 301 VEPTDFALEGYQHHPALTAPMAV 323 >gi|170725592|ref|YP_001759618.1| thymidylate synthase [Shewanella woodyi ATCC 51908] gi|169810939|gb|ACA85523.1| Thymidylate synthase [Shewanella woodyi ATCC 51908] Length = 283 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL +I G+ +RTG + + ++++ FPL+TT+K WKS + E Sbjct: 1 MKQYLDLCNRIIDEGTWIENERTGKRCLTVINADLVYNVADNEFPLITTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L ++RG N + + G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 MLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNSHRKGEDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L+ R I+S +N L PC F + L +QR Sbjct: 121 GSVDQLRKIVDNLKNGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSMLGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFALLAIVAQITGKKAGMAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 + INP+I L +DF + Y+ H AI SV Sbjct: 241 APASLTINPDIKSLEDLETWVTMDDFEVSGYQHHDAIKYPFSV 283 >gi|257079026|ref|ZP_05573387.1| thymidylate synthase [Enterococcus faecalis JH1] gi|256987056|gb|EEU74358.1| thymidylate synthase [Enterococcus faecalis JH1] Length = 234 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%) Query: 82 EWADKDGELGPIYGVQWRSWPDYDGNV--IDQISSIVQSLRADPYSRRHIVSAWNVALID 139 E+A+K GELG IYG QWR W DGN IDQ++++++ ++ +P SRR IVSAWN + Sbjct: 50 EFAEKYGELGNIYGAQWRHWETKDGNGSFIDQLANVIEMIKTNPDSRRLIVSAWNPEDVP 109 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A G GEF Sbjct: 110 SMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETGLAVGEF 169 Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 +HTLGD HLY NH EQ QLSR R+ P +++NP+ + F ED + Y+PH I Sbjct: 170 VHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYDPHPTIK 229 Query: 260 AKVSV 264 A ++V Sbjct: 230 APIAV 234 >gi|16272842|ref|NP_439065.1| thymidylate synthase [Haemophilus influenzae Rd KW20] gi|145628166|ref|ZP_01783967.1| thymidylate synthase [Haemophilus influenzae 22.1-21] gi|145629985|ref|ZP_01785767.1| thymidylate synthase [Haemophilus influenzae R3021] gi|260579995|ref|ZP_05847825.1| thymidylate synthase [Haemophilus influenzae RdAW] gi|260581732|ref|ZP_05849529.1| thymidylate synthase [Haemophilus influenzae NT127] gi|319897608|ref|YP_004135805.1| thymidylate synthetase [Haemophilus influenzae F3031] gi|1174840|sp|P44420|TYSY_HAEIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|1573924|gb|AAC22564.1| thymidylate synthetase (thyA) [Haemophilus influenzae Rd KW20] gi|144979941|gb|EDJ89600.1| thymidylate synthase [Haemophilus influenzae 22.1-21] gi|144984266|gb|EDJ91689.1| thymidylate synthase [Haemophilus influenzae R3021] gi|260093279|gb|EEW77212.1| thymidylate synthase [Haemophilus influenzae RdAW] gi|260095325|gb|EEW79216.1| thymidylate synthase [Haemophilus influenzae NT127] gi|317433114|emb|CBY81488.1| thymidylate synthetase [Haemophilus influenzae F3031] Length = 283 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|171317124|ref|ZP_02906326.1| Thymidylate synthase [Burkholderia ambifaria MEX-5] gi|171097691|gb|EDT42521.1| Thymidylate synthase [Burkholderia ambifaria MEX-5] Length = 323 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+ + +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRVVTHFDEGGASKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|332532620|ref|ZP_08408496.1| thymidylate synthase [Pseudoalteromonas haloplanktis ANT/505] gi|332037836|gb|EGI74285.1| thymidylate synthase [Pseudoalteromonas haloplanktis ANT/505] Length = 283 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 139/283 (49%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G + RTG + + +D++ FP++TT+K ++K+ + E Sbjct: 1 MKQYLELCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL +LRG + + G WD A+ + ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDSAAQFREIGCKTWDANANDNNAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+S ++ +L+ R I++ +N + L PC F + L YQR Sbjct: 121 STLDQLSKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N E D+QL+R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKIANAHIYENQLELMRDVQLTREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + Y+ H AI SV Sbjct: 241 ASPQLKINPEIKSLEDIETWVTRDDFEVTGYQCHEAIQYPFSV 283 >gi|68249491|ref|YP_248603.1| thymidylate synthase [Haemophilus influenzae 86-028NP] gi|81336082|sp|Q4QM04|TYSY_HAEI8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|68057690|gb|AAX87943.1| thymidylate synthase [Haemophilus influenzae 86-028NP] Length = 283 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+ + ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANVNAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|167623004|ref|YP_001673298.1| thymidylate synthase [Shewanella halifaxensis HAW-EB4] gi|189036944|sp|B0TIU4|TYSY_SHEHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|167353026|gb|ABZ75639.1| Thymidylate synthase [Shewanella halifaxensis HAW-EB4] Length = 283 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G+ + RTG + + +++ K FPL+TT+K +K+ + E Sbjct: 1 MKQYLDLCQRIIDEGTWVENSRTGKRCLTVINADLVYNVDKNEFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G + W+ A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRKIGCNTWNANANDNQAWLNNPHRKGVDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I+S +N L PC F + L +QR Sbjct: 121 GTIDQLRKIVDDLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + E D+Q+ R P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKAGTAFHKIVNAHIYEDQLELMRDVQIKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 + P+++INP+I L +DF + YE H AI SV Sbjct: 241 SSPKLVINPDIKSLEDLETWVTMDDFEVTGYEHHEAIKYPFSV 283 >gi|153816112|ref|ZP_01968780.1| hypothetical protein RUMTOR_02359 [Ruminococcus torques ATCC 27756] gi|145846597|gb|EDK23515.1| hypothetical protein RUMTOR_02359 [Ruminococcus torques ATCC 27756] Length = 297 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 93/279 (33%), Positives = 132/279 (47%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++D+ R +I G+ D T T FG R+DLSK FP LT ++ Sbjct: 21 KVFIDMCRDIIDNGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLSKEFPALTLRRTAI 80 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS V ELLW + SN ++ IWD WAD+ G +G YG Q Y +DQ Sbjct: 81 KSCVDELLWIWQKKSN--NVNELKSHIWDSWADETGSIGKAYGYQMGVKHQYKEGRMDQT 138 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166 ++ L+ +PYSRR + + + + +M L PC F V K L+ L QR Sbjct: 139 DRVIFDLKNNPYSRRIMTNIYVHNDLHEMHLYPCAYSMTFNVTKEKDSEKLTLNAILNQR 198 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV +N+ Y++L MLA V G + GEF+H + D H+Y+ H + +SR P Sbjct: 199 SQDVLAANNWNVCQYAVLVHMLAQVCGMKAGEFVHVIADAHIYDRHVPMIEELISREPLP 258 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P +NP I D F +D L YE H I ++V Sbjct: 259 APTFWLNPEITDFYDFTPDDVRLDRYETHPQIKNIPIAV 297 >gi|329122919|ref|ZP_08251490.1| thymidylate synthase [Haemophilus aegyptius ATCC 11116] gi|301169623|emb|CBW29224.1| thymidylate synthetase [Haemophilus influenzae 10810] gi|327471850|gb|EGF17290.1| thymidylate synthase [Haemophilus aegyptius ATCC 11116] Length = 283 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKTAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLVLMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|115351015|ref|YP_772854.1| thymidylate synthase [Burkholderia ambifaria AMMD] gi|115281003|gb|ABI86520.1| thymidylate synthase [Burkholderia ambifaria AMMD] Length = 323 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+ + +LG IYGVQWR WP Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDIYGVQWRQWPGYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|317502048|ref|ZP_07960230.1| thymidylate synthase [Lachnospiraceae bacterium 8_1_57FAA] gi|331090436|ref|ZP_08339317.1| thymidylate synthase [Lachnospiraceae bacterium 3_1_46FAA] gi|316896522|gb|EFV18611.1| thymidylate synthase [Lachnospiraceae bacterium 8_1_57FAA] gi|330401183|gb|EGG80776.1| thymidylate synthase [Lachnospiraceae bacterium 3_1_46FAA] Length = 282 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 93/279 (33%), Positives = 132/279 (47%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++D+ R +I G+ D T T FG R+DLSK FP LT ++ Sbjct: 6 KVFIDMCRDIIDNGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLSKEFPALTLRRTAI 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS V ELLW + SN ++ IWD WAD+ G +G YG Q Y +DQ Sbjct: 66 KSCVDELLWIWQKKSN--NVNELKSHIWDSWADETGSIGKAYGYQMGVKHQYKEGRMDQT 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166 ++ L+ +PYSRR + + + + +M L PC F V K L+ L QR Sbjct: 124 DRVIFDLKNNPYSRRIMTNIYVHNDLHEMHLYPCAYSMTFNVTKEKDSEKLTLNAILNQR 183 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV +N+ Y++L MLA V G + GEF+H + D H+Y+ H + +SR P Sbjct: 184 SQDVLAANNWNVCQYAVLVHMLAQVCGMKAGEFVHVIADAHIYDRHVPMIEELISREPLP 243 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P +NP I D F +D L YE H I ++V Sbjct: 244 APTFWLNPEITDFYDFTPDDVRLDRYETHPQIKNIPIAV 282 >gi|170696336|ref|ZP_02887466.1| Thymidylate synthase [Burkholderia graminis C4D1M] gi|170138742|gb|EDT06940.1| Thymidylate synthase [Burkholderia graminis C4D1M] Length = 323 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 104/323 (32%), Positives = 153/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ GS + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLDLVRTILDTGSWQENRTGIRTISMPGAVLRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ +P RR + AWN Sbjct: 121 AAASAQLADATARGFQVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N QL R P P + I+ + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLAMLQEQLKREPYESPTLAISDRVPDYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|315127380|ref|YP_004069383.1| thymidylate synthase [Pseudoalteromonas sp. SM9913] gi|315015894|gb|ADT69232.1| thymidylate synthase [Pseudoalteromonas sp. SM9913] Length = 283 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G + RTG + + +D++ FP++TT+K ++K+ + E Sbjct: 1 MKQYLELCQRIVDQGQWIENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG + G WD A+++ ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDSAEQFRNIGCKTWDANANENSAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ++ ++ +L+ R I++ +N + L PC F + L YQR Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N + D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKITNAHIYENQLDLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + Y+ H AI SV Sbjct: 241 ASPQLKINPEIKSLEDIETWVTRDDFEVVGYQCHEAIQYPFSV 283 >gi|319775163|ref|YP_004137651.1| thymidylate synthetase [Haemophilus influenzae F3047] gi|317449754|emb|CBY85961.1| thymidylate synthetase [Haemophilus influenzae F3047] Length = 283 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+ + ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANVNAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKRAGKAYHKIVNAHIYEDQLELMRDVQLKRKPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKSLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|172060020|ref|YP_001807672.1| thymidylate synthase [Burkholderia ambifaria MC40-6] gi|171992537|gb|ACB63456.1| Thymidylate synthase [Burkholderia ambifaria MC40-6] Length = 323 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+ + +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDCAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|33594075|ref|NP_881719.1| putative thymidylate synthase [Bordetella pertussis Tohama I] gi|62901354|sp|Q7VUE3|TYSY_BORPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|33564149|emb|CAE43421.1| putative thymidylate synthase [Bordetella pertussis Tohama I] gi|332383492|gb|AEE68339.1| thymidylate synthase [Bordetella pertussis CS] Length = 323 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 106/323 (32%), Positives = 161/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G+ + +RTGV T S G +RFDL +GFP +TTKK+ +KS + E++ Sbjct: 1 MKQYLDLVQSILDQGAWQENRTGVRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD+ A+++ +LGP+YGVQWR WP Y Sbjct: 61 GFLRATRSAAQFRALGCKVWDQNANENEQWLANPYREGPDDLGPVYGVQWRHWPAYKLLP 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 +DQ+ + ++R P RR + WN Sbjct: 121 SSAGGQVADALARGYRQVAEVDENGAPHVLLYKAVDQLRQCLDTIRQSPGDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF + G ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNAGTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241 G++ F + +GD H+Y NH QL+R P PQ++++ I D Sbjct: 241 GYKPRWFSYFIGDAHVYENHLPMLREQLAREPYPAPQLVLSDRIPDFAVTGKYEPQWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y+ HA + A ++V Sbjct: 301 VEPGDFTLSGYQHHAPLTAPMAV 323 >gi|119469927|ref|ZP_01612732.1| thymidylate synthase [Alteromonadales bacterium TW-7] gi|119446637|gb|EAW27910.1| thymidylate synthase [Alteromonadales bacterium TW-7] Length = 283 Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G + RTG + + +D++ FP++TT+K ++K+ + E Sbjct: 1 MKQYLKLCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG + G WD A+ + ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDSAEQFREIGCKTWDANANDNQAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ++ ++ +L+ R I++ +N + L PC F + L YQR Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAYHKIANAHIYENQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 P + INPNI L +DF + Y+ H AI SV Sbjct: 241 ESPTLTINPNIKSLEDIETWVTRDDFEVTGYQCHDAIQYPFSV 283 >gi|145636964|ref|ZP_01792628.1| thymidylate synthase [Haemophilus influenzae PittHH] gi|145269822|gb|EDK09761.1| thymidylate synthase [Haemophilus influenzae PittHH] Length = 283 Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++ G N + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIHGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|325577728|ref|ZP_08148003.1| thymidylate synthase [Haemophilus parainfluenzae ATCC 33392] gi|325160473|gb|EGC72599.1| thymidylate synthase [Haemophilus parainfluenzae ATCC 33392] Length = 283 Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL R ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 ETIDQLRKIVNNLSRGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGNKSGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ+ INP+I L +DF + Y+ H I SV Sbjct: 241 PSPQLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283 >gi|295677229|ref|YP_003605753.1| thymidylate synthase [Burkholderia sp. CCGE1002] gi|295437072|gb|ADG16242.1| thymidylate synthase [Burkholderia sp. CCGE1002] Length = 323 Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 158/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+++ +LG +YGVQWR WP Sbjct: 61 GFLRASRSAADFRELGCKVWDGNANQNAQWLANPYREGPDDLGDVYGVQWRKWPAYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ +P RR + AWN Sbjct: 121 ASASAQLADAQARGFRVITQFDEDGRSKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTRREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P++ I+ + D L Sbjct: 241 GYTPRWFSYFIGDAHIYENQLDMLQQQLKREPYESPRLAISDRVPDYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y+ H + A +++ Sbjct: 301 IEPADFSLVGYQHHEPLTAPMAI 323 >gi|261868754|ref|YP_003256676.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261414086|gb|ACX83457.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 283 Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL R +I G +RTG + + +D+ + FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCRRIIDEGVWVENERTGKRCLTVINANLTYDVVNNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ RSW +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ +N D L PC F + + L YQR Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTNTFSLLDDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAFHQIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P + INP+I L +DF + Y+ H I SV Sbjct: 241 PSPTLEINPDIKSLADLETWVTMDDFKVTGYQCHEPIKYPFSV 283 >gi|183597807|ref|ZP_02959300.1| hypothetical protein PROSTU_01136 [Providencia stuartii ATCC 25827] gi|188022562|gb|EDU60602.1| hypothetical protein PROSTU_01136 [Providencia stuartii ATCC 25827] Length = 283 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + +I G + RTGV + + +D++ FPL+TT+K +K+ + E Sbjct: 1 MKQYLELCQRIIDEGQWVENKRTGVRCLTVINADLEYDVANNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG + + G + W+ A+++ ++G +YGVQ RSW DG Sbjct: 61 LLGYLRGYDSAAQFREIGCNTWNANANENQAWLNNPHRKGEDDMGRVYGVQGRSWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ +V +L+ R I++ +N + L PC F + L YQR Sbjct: 121 SHLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R P Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 LP + INP I L +DFTL Y+ H AI +V Sbjct: 241 PLPSLSINPQIKTLEDIETWVSTDDFTLEGYQCHEAIKYPFTV 283 >gi|197334528|ref|YP_002155215.1| thymidylate synthase [Vibrio fischeri MJ11] gi|197316018|gb|ACH65465.1| thymidylate synthase [Vibrio fischeri MJ11] Length = 283 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D++ G FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCKRIVDEGTWIENERTGKRCLTVINADLTYDVANGQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDG 106 ++ ++RG N + G WD D ++G +YGVQ R+W +G Sbjct: 61 MIGYIRGYDNAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRAWAKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ I+ L R I++ +N D L PC F + L QR Sbjct: 121 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225 S DV LG+ FN+ L ++A + G + G+ H + + H+Y + E +QL R P Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQNVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 241 QAPIFKINPEIKSLEDLETWVTMDDFEVIGYESHDAIKYPFSV 283 >gi|226327104|ref|ZP_03802622.1| hypothetical protein PROPEN_00969 [Proteus penneri ATCC 35198] gi|225204322|gb|EEG86676.1| hypothetical protein PROPEN_00969 [Proteus penneri ATCC 35198] Length = 283 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + +I G + RTG + + +D++ FPL+TT+K +K+ + E Sbjct: 1 MKQYLALCQRIIDEGQWIDNKRTGTRCLTVINADLEYDVANNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 LL +LRG N G + W+ A+++G ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDNAGQFREIGCNTWNANANENGAWLNNPHRKGEDDMGRVYGVQGRQWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + DQ+ ++ +L R IV+ +N + L PC F + L YQR Sbjct: 121 SHFDQLRKVIDNLTKGIDDRGEIVTFYNPGETELGCLRPCMHTHTFSLVGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAFHKIINAHIYENQLPLMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP + INP I L +DFT+ Y+ H AI +V Sbjct: 241 PLPTLHINPKIKTLEDIETWVTTDDFTVEGYQCHEAIKYPFTV 283 >gi|197286164|ref|YP_002152036.1| thymidylate synthase [Proteus mirabilis HI4320] gi|227357284|ref|ZP_03841641.1| thymidylate synthase [Proteus mirabilis ATCC 29906] gi|194683651|emb|CAR44584.1| putative thymidylate synthase [Proteus mirabilis HI4320] gi|227162547|gb|EEI47536.1| thymidylate synthase [Proteus mirabilis ATCC 29906] Length = 283 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + +I G + RTG + + +D++ FPL+TT+K +K+ + E Sbjct: 1 MKQYLALCQRIIDEGEWIDNKRTGTRCLTVINADLEYDVANNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+++ ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDNAAQFRAIGCNTWNANANENSAWLNNPHRKGEDDMGRVYGVQGRQWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + DQ+ +V +L R IV+ +N L PC F + +L YQR Sbjct: 121 SHFDQLRKVVDNLTNGIDDRGEIVTFYNPGETALGCLRPCMHTHTFSLLGDRLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAFHKIVNAHIYENQLPLMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INPNI L +DF++ Y+ H AI +V Sbjct: 241 PLPKLHINPNIKTLDDIETWVTTDDFSVEGYQCHEAIKYPFTV 283 >gi|167758813|ref|ZP_02430940.1| hypothetical protein CLOSCI_01156 [Clostridium scindens ATCC 35704] gi|167663553|gb|EDS07683.1| hypothetical protein CLOSCI_01156 [Clostridium scindens ATCC 35704] Length = 282 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 94/279 (33%), Positives = 131/279 (46%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++D+ R +I G+D D T T FG R+DLSK FP LT ++ Sbjct: 6 KVFIDMCRDIIDHGTDTRGEKVRPVWEDGTPAYTIKKFGVVNRYDLSKEFPALTLRRTAI 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS ELLW + SN +H IWD WAD+DG +G YG Q Y + DQ+ Sbjct: 66 KSCTDELLWIWQKKSN--DIHELHSHIWDSWADEDGLIGKAYGYQMGVKHKYKEGMFDQV 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQR 166 ++ L+ +PYSRR + + + + +M L PC F V L+ L QR Sbjct: 124 DRVIYDLKHNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEQRSDRLTLNGILNQR 183 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV +N+ Y++L MLA V Q GEF+H + D H+Y+ H + + R P Sbjct: 184 SNDVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHVPMIEELIKREPLP 243 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P+ +NP I D F D L YE H I V+V Sbjct: 244 APKFWLNPEIKDFYQFTRNDVKLIGYETHEQIKDIPVAV 282 >gi|293390604|ref|ZP_06634938.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951138|gb|EFE01257.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 283 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R +I G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCRRIIDEGVWVENERTGKRCLTVINANLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ RSW +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ +N D L PC F + + L YQR Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLDDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAFHQIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P + INP+I L +DF + Y+ H I SV Sbjct: 241 PSPTLEINPDIKSLADLETWVTMDDFKVTGYQCHEPIKYPFSV 283 >gi|167563581|ref|ZP_02356497.1| thymidylate synthase [Burkholderia oklahomensis EO147] Length = 323 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDAGTWQNNRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRAKRSAADFRALGCKVWDANANENAQWLANPYRRGEDDLGDVYGVQWRRWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AQADAQIADATSRGFRVVARFEEGGARKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLEIAERVPDCAKTGQYEPEWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|315633683|ref|ZP_07888973.1| thymidylate synthase [Aggregatibacter segnis ATCC 33393] gi|315477725|gb|EFU68467.1| thymidylate synthase [Aggregatibacter segnis ATCC 33393] Length = 283 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCQRIVNEGVWVENERTGKRCLTVINAGLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ RSW +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAFHHIVNAHIYEDQLALMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ+ INP+I L +DF + Y+ H I SV Sbjct: 241 PSPQLEINPDIKSLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283 >gi|325262065|ref|ZP_08128803.1| thymidylate synthase [Clostridium sp. D5] gi|324033519|gb|EGB94796.1| thymidylate synthase [Clostridium sp. D5] Length = 282 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 93/279 (33%), Positives = 135/279 (48%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++ + R +I+ G+ D T FG R+DL K FP LT ++ Sbjct: 6 KVFIGMCRDIIENGTSTEGEKVRPVWEDGAPAYTVKRFGVVNRYDLRKEFPALTLRRTGI 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS V ELLW + SN +H IWD WAD+DG +G YG Q Y ++DQ+ Sbjct: 66 KSCVDELLWIWQKKSN--NIHELNSHIWDSWADEDGSIGKAYGYQMGVKHQYREGMMDQV 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQR 166 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QR Sbjct: 124 DRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKENNSDKLTLNAILNQR 183 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV +N+ Y++L MLA V G Q GEF+H + D H+Y+ H + +SR P Sbjct: 184 SQDVLAANNWNVCQYAVLVHMLAQVCGMQVGEFVHVIADAHIYDRHIPLIEELISREPFP 243 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 PQ +NP + D F +D L +YE H I ++V Sbjct: 244 APQFWLNPEVKDFYDFTTDDVRLDNYETHPQIKNIPIAV 282 >gi|167570744|ref|ZP_02363618.1| thymidylate synthase [Burkholderia oklahomensis C6786] Length = 323 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDAGTWQNNRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRAKRSAADFRALGCKVWDANANENAQWLANPYRRGEDDLGDVYGVQWRCWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRVVARFEEGGARKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLEIAERVPDCAKTGQYEPEWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|157374274|ref|YP_001472874.1| thymidylate synthase [Shewanella sediminis HAW-EB3] gi|189036946|sp|A8FSC3|TYSY_SHESH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157316648|gb|ABV35746.1| Thymidylate synthase [Shewanella sediminis HAW-EB3] Length = 283 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYL+L +I G+ +RTG + + +++ + FPL+TT+K WKS + E Sbjct: 1 MKQYLELCNRIIDEGTWIENERTGKRCLTVINADLTYNVGNNEFPLITTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L ++RG N + G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 MLGYIRGYDNAADFRALGAKTWDANANENQVWLNNPHRKGVDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L+A R I+S +N L PC F + L +QR Sbjct: 121 GTVDQLKKIVDNLKAGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVYTLLALIAQITGKKPGMAYHKIVNAHIYEDQLALMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 + INP+I L +DF + Y+ H AI SV Sbjct: 241 EPASLSINPDIKSLEDLETWVTMDDFEVSGYQHHEAIKYPFSV 283 >gi|153854663|ref|ZP_01995913.1| hypothetical protein DORLON_01909 [Dorea longicatena DSM 13814] gi|149752767|gb|EDM62698.1| hypothetical protein DORLON_01909 [Dorea longicatena DSM 13814] Length = 282 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 91/280 (32%), Positives = 136/280 (48%), Gaps = 20/280 (7%) Query: 2 HQYLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++++ R +I G+D D T T FG R+DLSK FP LT ++ Sbjct: 6 KVFINMCRDIIDNGTDTRGEKVRPVWEDGTPAYTIKKFGVVNRYDLSKEFPALTLRRTAI 65 Query: 53 KSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQ 111 KS ELLW + +N++ LH IWD WAD++G +G YG Q Y + DQ Sbjct: 66 KSCTDELLWIWQQKSNNINDLH---SHIWDSWADENGSIGKAYGYQMGVKHQYKEGMFDQ 122 Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQ 165 + ++ L+ +PYSRR + + + + +M L PC F V D L+ L Q Sbjct: 123 VDRVIYDLKNNPYSRRIMTNIYVHEDLHEMNLYPCAYSMTFNVTKKPGHDKLTLNAILNQ 182 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DV +N+ Y++L MLA V + GEF+H + D H+Y+ H + +SR P Sbjct: 183 RSNDVLAANNWNVCQYAVLIHMLAQVCDMEVGEFVHVIADAHIYDRHVPMIEELISRKPL 242 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P+ +NP + D F +D L Y+ H I V+V Sbjct: 243 PAPKFWLNPEVKDFYQFTRDDVKLIDYQTHDQIKNIPVAV 282 >gi|254973707|ref|ZP_05270179.1| thymidylate synthase [Clostridium difficile QCD-66c26] gi|255091097|ref|ZP_05320575.1| thymidylate synthase [Clostridium difficile CIP 107932] gi|255312752|ref|ZP_05354335.1| thymidylate synthase [Clostridium difficile QCD-76w55] gi|255515512|ref|ZP_05383188.1| thymidylate synthase [Clostridium difficile QCD-97b34] gi|255648605|ref|ZP_05395507.1| thymidylate synthase [Clostridium difficile QCD-37x79] gi|260681823|ref|YP_003213108.1| thymidylate synthase [Clostridium difficile CD196] gi|260685420|ref|YP_003216553.1| thymidylate synthase [Clostridium difficile R20291] gi|306518729|ref|ZP_07405076.1| thymidylate synthase [Clostridium difficile QCD-32g58] gi|260207986|emb|CBA60142.1| thymidylate synthase [Clostridium difficile CD196] gi|260211436|emb|CBE01538.1| thymidylate synthase [Clostridium difficile R20291] Length = 276 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 12/271 (4%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ ++++ G D T F R+DLSK FP+LT + + K+ Sbjct: 8 FIDMCNNILENGVSSDGEVVRAKWDDGQPAHTIKKFCVVNRYDLSKEFPILTLRPTNLKA 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 + ELLW + SN ++ IWD WAD+ G +G YG Q Y DQI Sbjct: 68 AIDELLWIWQKKSN--NINDLNSRIWDSWADETGSIGKAYGYQIGQKHKYKEGEFDQIDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 ++ L+ +PYSRR I + +N +++M L PC F V +L+ L QRS D+ + Sbjct: 126 VIYDLKYNPYSRRIITNIYNHNDLNEMNLYPCAYSMTFNVTGNRLNAILNQRSNDILVAN 185 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 +N+ Y++L MLA + + GE +H + D H+Y+ H ++R P++IINP Sbjct: 186 NWNVTQYAILVHMLAQISDLEVGELVHVIADAHIYDRHIPLVKELINRESYDAPKLIINP 245 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAI-LAKVSV 264 NI + FR EDFTL +Y+ I V++ Sbjct: 246 NIKNFYDFRVEDFTLENYKSGPQIKKIPVAI 276 >gi|161525388|ref|YP_001580400.1| thymidylate synthase [Burkholderia multivorans ATCC 17616] gi|189349875|ref|YP_001945503.1| thymidylate synthase [Burkholderia multivorans ATCC 17616] gi|221201301|ref|ZP_03574341.1| thymidylate synthase [Burkholderia multivorans CGD2M] gi|221206245|ref|ZP_03579258.1| thymidylate synthase [Burkholderia multivorans CGD2] gi|221213524|ref|ZP_03586498.1| thymidylate synthase [Burkholderia multivorans CGD1] gi|160342817|gb|ABX15903.1| Thymidylate synthase [Burkholderia multivorans ATCC 17616] gi|189333897|dbj|BAG42967.1| thymidylate synthase [Burkholderia multivorans ATCC 17616] gi|221166313|gb|EED98785.1| thymidylate synthase [Burkholderia multivorans CGD1] gi|221173554|gb|EEE05988.1| thymidylate synthase [Burkholderia multivorans CGD2] gi|221179151|gb|EEE11558.1| thymidylate synthase [Burkholderia multivorans CGD2M] Length = 323 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+++ +LG +YGVQWR WP Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AHADAQLADAQRRGFRIVTRFDEDGAQKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P+++I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPRLVIADRVPEYAKTGVYEPEWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|258539604|ref|YP_003174103.1| thymidylate synthase [Lactobacillus rhamnosus Lc 705] gi|257151280|emb|CAR90252.1| Thymidylate synthase [Lactobacillus rhamnosus Lc 705] Length = 256 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 112/256 (43%), Positives = 148/256 (57%), Gaps = 50/256 (19%) Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWA---------------------------------- 84 +LWFL GD+N+ +L +H IWDEWA Sbjct: 1 MLWFLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHE 60 Query: 85 ----------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR Sbjct: 61 EMAKFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRL 120 Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 IVSAWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++ Sbjct: 121 IVSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLV 180 Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFT 248 A G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D Sbjct: 181 AHECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIK 240 Query: 249 LRSYEPHAAILAKVSV 264 L +Y+P+ AI A V+V Sbjct: 241 LLNYDPYPAIKAPVAV 256 >gi|221133983|ref|ZP_03560288.1| thymidylate synthase [Glaciecola sp. HTCC2999] Length = 283 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDR-RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QY DL + +I G +RTG + + ++++ FPL+TT+K +K+ + E Sbjct: 1 MRQYEDLCQRIIDEGEWVYNERTGKRCLTLINADLEYNVADNEFPLVTTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+++ ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDNAADFRAIGCNTWNANANENSAWLNNPHRKGEDDMGRVYGVQGRRWMTPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ SIV L SR I++ +N + L PC F + GKL +QR Sbjct: 121 REIDQLKSIVDDLSKGIDSRGEILTFYNPGEFEYGCLRPCMHTHHFSLLGGKLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S D+ LGI FN +L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADIPLGINFNQVQVFVLLALMAQITGHKPGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + YE H I +V Sbjct: 241 PAPKLTINPKIKTLADIETWVTTDDFKVEGYECHEPIKYPFAV 283 >gi|90412457|ref|ZP_01220460.1| thymidylate synthase [Photobacterium profundum 3TCK] gi|90326494|gb|EAS42900.1| thymidylate synthase [Photobacterium profundum 3TCK] Length = 283 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 92/283 (32%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G + RT + + FD++ FPL+TT+K WKS + E Sbjct: 1 MKQYLELCQRIVDDGVWIENKRTNKRCLTVVNADLTFDVANNQFPLITTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ RSW DG Sbjct: 61 LLGYIRGYDNAADFRALGTKTWDMNANDNLAWLNNPHRKGEDDMGRVYGVQGRSWQKSDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 STIDQLRKIVDNLSEGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + D+QL+R+P Sbjct: 181 SCDVPLGLNFNQVQVYTLLALMAQITGKKPGLAYHKIINAHIYEDQLPLLRDVQLTRTPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++IINP I L +DF + YE H AI SV Sbjct: 241 ASPKLIINPKIKSLEDLETWVTMDDFEVIGYEHHEAIKYPFSV 283 >gi|77359700|ref|YP_339275.1| thymidylate synthase [Pseudoalteromonas haloplanktis TAC125] gi|123587148|sp|Q3IDN1|TYSY_PSEHT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|76874611|emb|CAI85832.1| thymidylate synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 283 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G + RTG + + +D++ FP++TT+K ++K+ + E Sbjct: 1 MKQYLQLCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG + + G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 LLGYLRGYDSAAQFREIGCKTWDANANENSAWLNNPHRKGEDDMGRVYGVQGRAWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ++ ++ +L+ R I+S +N + L PC F + L QR Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIISFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSIQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKITNAHIYENQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 PQ+ INPNI L +DF + YE H AI SV Sbjct: 241 ASPQLKINPNIKSLNDIETWVTRDDFEVTGYECHEAIQYPFSV 283 >gi|149192450|ref|ZP_01870644.1| thymidylate synthase [Vibrio shilonii AK1] gi|148833716|gb|EDL50759.1| thymidylate synthase [Vibrio shilonii AK1] Length = 283 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDEGVWIENERTGKRCLTVINADLTYDVANNAFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLSKGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 AAPTFRINPKIKTLEDLETWVTLDDFEVEGYECHEPIRYPFSV 283 >gi|251791893|ref|YP_003006613.1| thymidylate synthase [Aggregatibacter aphrophilus NJ8700] gi|247533280|gb|ACS96526.1| thymidylate synthase [Aggregatibacter aphrophilus NJ8700] Length = 283 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCQRIVDEGVWIENERTGKRCLTVINASLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRNWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAFHHIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ+ INP+I L +DF + Y+ H I SV Sbjct: 241 PSPQLEINPDIKSLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283 >gi|167586578|ref|ZP_02378966.1| Thymidylate synthase [Burkholderia ubonensis Bu] Length = 323 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+++ +LG +YGVQWR WP Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPHRQGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ DP SRR + WN Sbjct: 121 AGADAQIADATGRGFRIVARFDEDGAPKVLLYKAIDQLRECLDTIMQDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + + L Sbjct: 241 GYTPRWFTYFVGDAHIYENQLDMLQQQLAREPYESPRLAIADRVPEYAQTGVYAPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|71658760|sp|Q5E7P1|TYSY_VIBF1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 283 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D+ G FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDEGTWIENERTGKRCLTVINADLTYDVENGVFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDG 106 ++ ++RG + + G WD D ++G +YGVQ RSW +G Sbjct: 61 MIGYIRGYDSAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRSWAKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ I+ L R I++ +N D L PC F + L QR Sbjct: 121 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225 S DV LG+ FN+ L ++A + G + G+ H + + H+Y + E +QL R P Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQSVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 241 QAPIFKINPEIKSLEDLETWVTMDDFEVIGYESHEAIKYPFSV 283 >gi|33595476|ref|NP_883119.1| putative thymidylate synthase [Bordetella parapertussis 12822] gi|33599861|ref|NP_887421.1| putative thymidylate synthase [Bordetella bronchiseptica RB50] gi|62901355|sp|Q7W1A9|TYSY_BORPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901356|sp|Q7WP13|TYSY_BORBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|33565554|emb|CAE40196.1| putative thymidylate synthase [Bordetella parapertussis] gi|33567458|emb|CAE31371.1| putative thymidylate synthase [Bordetella bronchiseptica RB50] Length = 323 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 160/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G+ + +RTGV T S G +RFDL +GFP +TTKK+ +KS + E++ Sbjct: 1 MKQYLDLVQSILDQGAWQENRTGVRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD+ A+++ +LGP+YGVQWR WP Y Sbjct: 61 GFLRATRSAAQFRALGCKVWDQNANENEQWLANPYREGPDDLGPVYGVQWRHWPAYKLLP 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 +DQ+ + ++ P RR + WN Sbjct: 121 RSAGGQVADALARGYRQVAEVAENGAPHVLLYKAVDQLRQCLDTIHQSPGDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF + G ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNAGTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241 G++ F + +GD H+Y NH QL+R P PQ++++ I D Sbjct: 241 GYKPRWFSYFIGDAHVYENHLPMLREQLTREPYPAPQLVLSDRIPDFAVTGKYEPQWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y+ HA + A ++V Sbjct: 301 VEPGDFTLSGYQHHAPLTAPMAV 323 >gi|206561247|ref|YP_002232012.1| thymidylate synthase [Burkholderia cenocepacia J2315] gi|198037289|emb|CAR53211.1| putative thymidylate synthase [Burkholderia cenocepacia J2315] Length = 323 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ GS + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGSWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+++ +LG +YGVQWR WP Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|323526913|ref|YP_004229066.1| thymidylate synthase [Burkholderia sp. CCGE1001] gi|323383915|gb|ADX56006.1| thymidylate synthase [Burkholderia sp. CCGE1001] Length = 323 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 155/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ +P RR + AWN Sbjct: 121 AGAAAQLADASARGFRVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P + I+ + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLAREPYDSPTLAISDRVPDYAQTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLIGYRHHEPLTAPMAV 323 >gi|152997743|ref|YP_001342578.1| thymidylate synthase [Marinomonas sp. MWYL1] gi|189036938|sp|A6W1R4|TYSY_MARMS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|150838667|gb|ABR72643.1| Thymidylate synthase [Marinomonas sp. MWYL1] Length = 283 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G + RTG + + +D+SKG FPL+TT+K +WKS + E Sbjct: 1 MKQYLDLCNRIVNEGEWVSNERTGKRCLTVINADLTYDVSKGEFPLVTTRKSYWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 ++ +LRG N + G WD A+++ ++G YG R++P DG Sbjct: 61 IIGYLRGYDNAADFRALGTKTWDANANENEVWLNSPYRKGEDDMGLCYGAIGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID + I+ L +R I++ ++ L PC F + L QR Sbjct: 121 GHIDLLKQIIDDLSRGVDNRGEILTFYHPGAFHMACLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ +L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVLLAIVAQITGKKPGKAFHKIVNAHIYEDQLELMRDVQLKREPY 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP + INP I L +DF + Y+ H I SV Sbjct: 241 PLPTLKINPEIKSLKDIETWVTMDDFEIEGYQFHEPIAYPFSV 283 >gi|167856338|ref|ZP_02479067.1| thymidylate synthase [Haemophilus parasuis 29755] gi|167852534|gb|EDS23819.1| thymidylate synthase [Haemophilus parasuis 29755] Length = 283 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G +RTG + + +D++KG FPL+TT+K WK+ + E Sbjct: 1 MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLTYDVAKGAFPLVTTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P G Sbjct: 61 LLGYIRGYDNAADFRQLGTKSWDANANENAAWLANPHRKGEDDMGLVYGAVGRNFPKVGG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + G Q G+ H + + H+Y + E D+QL R+P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGLQAGQAFHKIVNAHIYEDQLELMRDVQLKRTPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P + INP+I L DF + YE H +I SV Sbjct: 241 KAPTLKINPDIKSLEDLETWVTLADFEVEGYEYHPSIQYPFSV 283 >gi|325522963|gb|EGD01399.1| thymidylate synthase [Burkholderia sp. TJI49] Length = 323 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+++ +LG +YGVQWR WP Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIIENPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNAAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|218133162|ref|ZP_03461966.1| hypothetical protein BACPEC_01024 [Bacteroides pectinophilus ATCC 43243] gi|217992035|gb|EEC58039.1| hypothetical protein BACPEC_01024 [Bacteroides pectinophilus ATCC 43243] Length = 275 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 82/272 (30%), Positives = 132/272 (48%), Gaps = 11/272 (4%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++D+ +I G D + T FG R+DLS+ FP++T ++ + Sbjct: 6 KVFIDMCNDIIDNGYSTEGEKVRPKWDDGSYAYTIKKFGVVNRYDLSREFPIMTLRRTAF 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS + E+LW + SN + IWDEWAD++G +G YG Q Y ++DQ+ Sbjct: 66 KSCIDEILWIWQKKSN--NIKDLNSHIWDEWADENGSIGKAYGYQLGVRHQYKEGMMDQV 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 ++ L+ +PYSRR + + + + +M L PC F V KL+ L QRS D+ Sbjct: 124 DRVLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTGNKLNAILNQRSNDILT 183 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232 +N+ Y++L M+A V G + GE +H + D H+Y+ H + R P + Sbjct: 184 ANNWNVVQYAVLVHMIAQVSGLEAGELVHVIADAHIYDRHIPLVKELIKRQTYDAPVFRM 243 Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 NP++ D F +DF L Y+ I V+V Sbjct: 244 NPDVKDFYEFTVDDFELEDYKYGTQIKIPVAV 275 >gi|323492567|ref|ZP_08097713.1| thymidylate synthase [Vibrio brasiliensis LMG 20546] gi|323313169|gb|EGA66287.1| thymidylate synthase [Vibrio brasiliensis LMG 20546] Length = 283 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRNLGTKTWDANANQNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 241 KAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDAIKYPFSV 283 >gi|268590564|ref|ZP_06124785.1| thymidylate synthase [Providencia rettgeri DSM 1131] gi|291313951|gb|EFE54404.1| thymidylate synthase [Providencia rettgeri DSM 1131] Length = 283 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M YLDL + +I G + RTGV + + +D+ + FPL+TT+K +K+ + E Sbjct: 1 MKPYLDLCQRIIDEGQWVENKRTGVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+++ ++G +YGVQ RSW DG Sbjct: 61 LLGYLRGYDNAAQFREIGCNTWNANANENQAWLNNPYRKGEDDMGRVYGVQGRSWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ +V +L+ R I++ +N + L PC F + L YQR Sbjct: 121 THLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R P Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARISGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 P ++INP I L +DFTL Y+ H AI +V Sbjct: 241 ASPSLVINPKIQSLEDLETWVTSDDFTLEGYQCHEAIKYPFTV 283 >gi|71279358|ref|YP_270289.1| thymidylate synthase [Colwellia psychrerythraea 34H] gi|123774868|sp|Q47Y31|TYSY_COLP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|71145098|gb|AAZ25571.1| thymidylate synthase [Colwellia psychrerythraea 34H] Length = 283 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M YLDL + +I G+ +RTG + + +++ + FPL+TT+K +KS + E Sbjct: 1 MRAYLDLCQRIIDQGTWVENERTGKRCLTVINADLEYNVGNNEFPLITTRKSFFKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDG 106 + ++RG + + + G WD + ++G +YG+Q R+W DG Sbjct: 61 FIGYIRGYDSAADFRKLGTKTWDANANLNDAWLNNTHRKGEDDMGRVYGIQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L+ R I++ +N L PC F + L +QR Sbjct: 121 GTIDQLKKIVDNLKDGIDDRAEIMTFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL-QLSRSPR 225 S DV LG+ FN + ++A + G + G H + + H+Y + QL R P Sbjct: 181 SCDVPLGLNFNQVQVFVFLALMAQITGKKAGMAYHKIVNAHIYEDQLPLMKEVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++IINP I L +DF + YE H AI +V Sbjct: 241 ALPKLIINPEIKSLEDLETWVTMDDFKVEGYECHEAIKYPFAV 283 >gi|78065671|ref|YP_368440.1| thymidylate synthase [Burkholderia sp. 383] gi|77966416|gb|ABB07796.1| thymidylate synthase [Burkholderia sp. 383] Length = 323 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+++ +LG +YGVQWR WP Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ +P RR + AWN Sbjct: 121 AGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLELVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEIAERVPEYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323 >gi|90580564|ref|ZP_01236369.1| thymidylate synthase [Vibrio angustum S14] gi|90438222|gb|EAS63408.1| thymidylate synthase [Photobacterium angustum S14] Length = 286 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 18/280 (6%) Query: 3 QYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QY +L + VI G +RTG + + +DLSK FPL+TT+K WKS + E+L Sbjct: 7 QYENLCKRVIDEGVWIENERTGKRCLTIINADLEYDLSKNEFPLVTTRKAFWKSAIAEML 66 Query: 61 WFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDGNV 108 +LRG N + G WD + ++G +YGVQ R+W DG Sbjct: 67 GYLRGYDNAADFRNIGTKTWDANANLNEAWLNNSHRKGEDDMGRVYGVQGRAWAKPDGGF 126 Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 +DQ I+ +L R I+S +NV L PC F + L QRS Sbjct: 127 VDQYKKIIGNLSKGIDDRGEIMSFYNVGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQRSC 186 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV LG+ FN + L + A + G + G+ H + + H+Y + + Q+ R P + P Sbjct: 187 DVPLGLVFNQIQVAWLLQITAQICGLKAGKAFHKIVNAHIYEDQLDLMKEQIKREPYSSP 246 Query: 229 QMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 ++I+NP I L +DF + Y H I +V Sbjct: 247 KLIMNPKIKSLEDLETWVTVDDFEVIDYRHHEPIKYPFAV 286 >gi|113461755|ref|YP_719824.1| thymidylate synthase [Haemophilus somnus 129PT] gi|170718531|ref|YP_001783740.1| thymidylate synthase [Haemophilus somnus 2336] gi|123132252|sp|Q0I563|TYSY_HAES1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|189036936|sp|B0UWT7|TYSY_HAES2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|112823798|gb|ABI25887.1| thymidylate synthase [Haemophilus somnus 129PT] gi|168826660|gb|ACA32031.1| Thymidylate synthase [Haemophilus somnus 2336] Length = 283 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + +I G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MRQYLNLCQRIIDQGHWVENERTGKRCLTVINADLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPVRKGTDDMGRVYGVQGRRWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ +N ID L PC F + L YQR Sbjct: 121 ETVDQLRKIVNNLSKGIDDRGEILTFFNPGEIDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + FE D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAYHKIINAHIYEDQFELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP+I L +DF + Y+ H AI SV Sbjct: 241 PLPRLEINPDIKTLEDLETWVTMDDFKVIGYQCHEAIKYPFSV 283 >gi|212711211|ref|ZP_03319339.1| hypothetical protein PROVALCAL_02283 [Providencia alcalifaciens DSM 30120] gi|212686379|gb|EEB45907.1| hypothetical protein PROVALCAL_02283 [Providencia alcalifaciens DSM 30120] Length = 283 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G + RT V + + +D+ + FPL+TT+K +K+ + E Sbjct: 1 MKQYLELCQRILDEGQWVENKRTNVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+++ ++G +YGVQ RSW DG Sbjct: 61 LLGYLRGYDNAAQFREIGCNTWNANANENQAWLDNPHRKGEDDMGRVYGVQGRSWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ +V +L+ R I++ +N + L PC F + L YQR Sbjct: 121 SHLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL+R P Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLTREPY 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P + INP I L +DFTL Y+ H AI +V Sbjct: 241 PSPNLTINPEIKTLEDIETWVTTDDFTLEGYQCHEAIKYPFTV 283 >gi|107022163|ref|YP_620490.1| thymidylate synthase [Burkholderia cenocepacia AU 1054] gi|116689108|ref|YP_834731.1| thymidylate synthase [Burkholderia cenocepacia HI2424] gi|170732396|ref|YP_001764343.1| thymidylate synthase [Burkholderia cenocepacia MC0-3] gi|254245954|ref|ZP_04939275.1| Thymidylate synthase [Burkholderia cenocepacia PC184] gi|105892352|gb|ABF75517.1| thymidylate synthase [Burkholderia cenocepacia AU 1054] gi|116647197|gb|ABK07838.1| thymidylate synthase [Burkholderia cenocepacia HI2424] gi|124870730|gb|EAY62446.1| Thymidylate synthase [Burkholderia cenocepacia PC184] gi|169815638|gb|ACA90221.1| Thymidylate synthase [Burkholderia cenocepacia MC0-3] Length = 323 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+++ +LG +YGVQWR WP Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ +P RR + AWN Sbjct: 121 ANADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPEYAKTGVYAPEWLEQ 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323 >gi|328462355|gb|EGF34425.1| thymidylate synthase [Lactobacillus rhamnosus MTCC 5462] Length = 255 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 111/255 (43%), Positives = 147/255 (57%), Gaps = 50/255 (19%) Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84 +WFL GD+N+ +L +H IWDEWA Sbjct: 1 MWFLHGDTNIRFLLQHKNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEE 60 Query: 85 ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 K G+LG +YG QWR+W G+ IDQ+ +++ ++ PYSRR I Sbjct: 61 MAKFDDKVLHDDDFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLI 120 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 VSAWN + MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A Sbjct: 121 VSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVA 180 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 G + GEFIHT GD HLY NH +Q QLSR+PR P + +NP+ D+ F +D L Sbjct: 181 HECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKL 240 Query: 250 RSYEPHAAILAKVSV 264 +Y+P+ AI A V+V Sbjct: 241 LNYDPYPAIKAPVAV 255 >gi|254509415|ref|ZP_05121496.1| thymidylate synthase [Vibrio parahaemolyticus 16] gi|219547652|gb|EED24696.1| thymidylate synthase [Vibrio parahaemolyticus 16] Length = 283 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 132/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + +++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVEHGEWIENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INPNI L +DF + YE H AI SV Sbjct: 241 KAPTFHINPNIKSLEDLETWVTLDDFWVEGYEHHDAIKYPFSV 283 >gi|89072546|ref|ZP_01159118.1| thymidylate synthase [Photobacterium sp. SKA34] gi|89051650|gb|EAR57103.1| thymidylate synthase [Photobacterium sp. SKA34] Length = 283 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 90/283 (31%), Positives = 132/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G +RTG + + +D++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLALCQRIVDEGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+ + ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDNAAQFRAIGCNTWNANANDNPAWLNNPHRKGEDDMGRVYGVQGRRWQKTDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N D L PC F + L YQR Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + E D+QL R+P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKRTPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + YE H I SV Sbjct: 241 ASPQLKINPKIKSLEDLETWVTLDDFEVVGYEHHDPIQYPFSV 283 >gi|293607661|ref|ZP_06689993.1| thymidylate synthase [Achromobacter piechaudii ATCC 43553] gi|292813946|gb|EFF73095.1| thymidylate synthase [Achromobacter piechaudii ATCC 43553] Length = 323 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ GS + +RTG+ T S G +RFDL KGFP +TTKK+ +KS + E++ Sbjct: 1 MKQYLDLVQSILDTGSWQENRTGIRTISMPGASLRFDLQKGFPAVTTKKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD+ A+++ +LGP+YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRELGCKVWDQNANENSQWLANPYREGPDDLGPVYGVQWRQWPAYKLLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 +DQ+ + ++ P RR + WN Sbjct: 121 ASRPGQLEDALSRGYSKVADLEEGGVPKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241 G+ F + +GD H+Y NH QL+R P P+++++ I D Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTREPYESPRLVLSDRIPDFAVTGRYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y HA + A ++V Sbjct: 301 VEPSDFSLSGYTHHAPLTAPMAV 323 >gi|238026573|ref|YP_002910804.1| thymidylate synthase [Burkholderia glumae BGR1] gi|237875767|gb|ACR28100.1| Thymidylate synthase [Burkholderia glumae BGR1] Length = 323 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 154/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ GS + +RTGV T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGSWQENRTGVRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANENAAWLANPYRTGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AQATAQLEDALARGYRIVTRFDEAGAQKLLLHKAIDQLRDCLDTIMRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 ++++ALP CH L+QF + ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PVKLEEIALPACHLLYQFLPNLAKREISLCLYIRSNDVGLGTPFNLAEGAALLELVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+Q F + +GD H+Y N + QL R P P++ I + D L Sbjct: 241 GYQPRWFSYFIGDAHIYENQLDMLRQQLEREPYESPRLEIAERVPDYAKTGVYAPEWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y HA + A ++V Sbjct: 301 IEPADFTLAGYRHHAPLSAPMAV 323 >gi|167522878|ref|XP_001745776.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775577|gb|EDQ89200.1| predicted protein [Monosiga brevicollis MX1] Length = 398 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 97/243 (39%), Positives = 137/243 (56%), Gaps = 45/243 (18%) Query: 66 DSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------DYD 105 ++N + L V IWD KD G+LGP+YG QWR + DY Sbjct: 33 NTNANDLAARDVHIWDANGSKDFLEKQGLGHREEGDLGPVYGFQWRHFGAEYKDMHTDYS 92 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 G +DQ++ +++ ++ +P SRR I+SAWN I KMALPPCH + QFYV +G+LSCQLYQ Sbjct: 93 GQGVDQLAEVIEQIKTNPDSRRIIMSAWNPLDIPKMALPPCHTMCQFYVCDGELSCQLYQ 152 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH + + QL R PR Sbjct: 153 RSADMGLGVPFNIASYALLTYMIAQVTGLKPGDFVHTIGDAHVYLNHVDALEEQLKREPR 212 Query: 226 TLPQMIINPNIVD-------------------------LLSFRYEDFTLRSYEPHAAILA 260 P + +I + + F++EDF L+ Y+PH I Sbjct: 213 PFPTLSFKRDIEEYVHAFGQHVTNPLEHRPTAALLSLGIDDFKFEDFDLQGYKPHNRIAM 272 Query: 261 KVS 263 ++ Sbjct: 273 DMA 275 >gi|134295116|ref|YP_001118851.1| thymidylate synthase [Burkholderia vietnamiensis G4] gi|134138273|gb|ABO54016.1| thymidylate synthase [Burkholderia vietnamiensis G4] Length = 323 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 155/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLR + + G +WD A+ + +LG +YGVQWR WP Sbjct: 61 GFLRASRSAADFRALGCKVWDANANDNAQWLANPYRRGVDDLGDVYGVQWRQWPGYKVLD 120 Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG IDQ+ + ++ +P RR + AWN Sbjct: 121 ASADAQIADATRRGFRIVTQFDEDGAPKVLLYKAIDQLRQCLDTIIENPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNAAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYDSPRLEIAERVPDYAKTGVYAPEWLEL 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPSDFSLVGYRHHEPLSAPMAV 323 >gi|212636535|ref|YP_002313060.1| thymidylate synthase [Shewanella piezotolerans WP3] gi|226713172|sp|B8CQK7|TYSY_SHEPW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|212558019|gb|ACJ30473.1| Thymidylate synthetase (thyA), putative [Shewanella piezotolerans WP3] Length = 283 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + +I G+ + RTG + + + + K FPL+TT+K WK+ + E Sbjct: 1 MKQYLELCQRIIDEGTWVENSRTGKRCLTVINADLVYHVDKNEFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L ++RG N + G WD A+ + ++G +YGVQ R W DG Sbjct: 61 MLGYIRGYDNAADFRNIGAKTWDANANDNQAWLNNPHRKGADDMGRVYGVQGRGWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I+S +N L PC F + L +QR Sbjct: 121 GSIDQLRKIVDNLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + E +QL RSP Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGHKAGTAYHKIVNAHIYEDQLELMQSVQLKRSPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ+ INP+I L +DF + YE H I SV Sbjct: 241 PSPQLSINPDIKSLEDLETWVTMDDFEVTGYEHHEGIRYPFSV 283 >gi|53720080|ref|YP_109066.1| thymidylate synthase [Burkholderia pseudomallei K96243] gi|53724744|ref|YP_102198.1| thymidylate synthase [Burkholderia mallei ATCC 23344] gi|67642871|ref|ZP_00441622.1| thymidylate synthase [Burkholderia mallei GB8 horse 4] gi|76811492|ref|YP_334325.1| thymidylate synthase [Burkholderia pseudomallei 1710b] gi|121599317|ref|YP_993825.1| thymidylate synthase [Burkholderia mallei SAVP1] gi|124384034|ref|YP_001026887.1| thymidylate synthase [Burkholderia mallei NCTC 10229] gi|126450390|ref|YP_001079826.1| thymidylate synthase [Burkholderia mallei NCTC 10247] gi|126454374|ref|YP_001067140.1| thymidylate synthase [Burkholderia pseudomallei 1106a] gi|167002756|ref|ZP_02268546.1| thymidylate synthase [Burkholderia mallei PRL-20] gi|167739605|ref|ZP_02412379.1| thymidylate synthase [Burkholderia pseudomallei 14] gi|167816807|ref|ZP_02448487.1| thymidylate synthase [Burkholderia pseudomallei 91] gi|167825213|ref|ZP_02456684.1| thymidylate synthase [Burkholderia pseudomallei 9] gi|167846713|ref|ZP_02472221.1| thymidylate synthase [Burkholderia pseudomallei B7210] gi|167903685|ref|ZP_02490890.1| thymidylate synthase [Burkholderia pseudomallei NCTC 13177] gi|167911934|ref|ZP_02499025.1| thymidylate synthase [Burkholderia pseudomallei 112] gi|217421016|ref|ZP_03452521.1| thymidylate synthase [Burkholderia pseudomallei 576] gi|237813246|ref|YP_002897697.1| thymidylate synthase [Burkholderia pseudomallei MSHR346] gi|242317181|ref|ZP_04816197.1| thymidylate synthase [Burkholderia pseudomallei 1106b] gi|254177043|ref|ZP_04883700.1| thymidylate synthase [Burkholderia mallei ATCC 10399] gi|254181135|ref|ZP_04887733.1| thymidylate synthase [Burkholderia pseudomallei 1655] gi|254191996|ref|ZP_04898496.1| thymidylate synthase [Burkholderia pseudomallei Pasteur 52237] gi|254195598|ref|ZP_04902025.1| thymidylate synthase [Burkholderia pseudomallei S13] gi|254203878|ref|ZP_04910238.1| thymidylate synthase [Burkholderia mallei FMH] gi|254208859|ref|ZP_04915207.1| thymidylate synthase [Burkholderia mallei JHU] gi|254259968|ref|ZP_04951022.1| thymidylate synthase [Burkholderia pseudomallei 1710a] gi|254295668|ref|ZP_04963126.1| thymidylate synthase [Burkholderia pseudomallei 406e] gi|254360085|ref|ZP_04976355.1| thymidylate synthase [Burkholderia mallei 2002721280] gi|52210494|emb|CAH36477.1| putative thymidylate synthase [Burkholderia pseudomallei K96243] gi|52428167|gb|AAU48760.1| thymidylate synthase [Burkholderia mallei ATCC 23344] gi|76580945|gb|ABA50420.1| thymidylate synthase [Burkholderia pseudomallei 1710b] gi|121228127|gb|ABM50645.1| thymidylate synthase [Burkholderia mallei SAVP1] gi|124292054|gb|ABN01323.1| thymidylate synthase [Burkholderia mallei NCTC 10229] gi|126228016|gb|ABN91556.1| thymidylate synthase [Burkholderia pseudomallei 1106a] gi|126243260|gb|ABO06353.1| thymidylate synthase [Burkholderia mallei NCTC 10247] gi|147745390|gb|EDK52470.1| thymidylate synthase [Burkholderia mallei FMH] gi|147750735|gb|EDK57804.1| thymidylate synthase [Burkholderia mallei JHU] gi|148029325|gb|EDK87230.1| thymidylate synthase [Burkholderia mallei 2002721280] gi|157805557|gb|EDO82727.1| thymidylate synthase [Burkholderia pseudomallei 406e] gi|157987818|gb|EDO95583.1| thymidylate synthase [Burkholderia pseudomallei Pasteur 52237] gi|160698084|gb|EDP88054.1| thymidylate synthase [Burkholderia mallei ATCC 10399] gi|169652344|gb|EDS85037.1| thymidylate synthase [Burkholderia pseudomallei S13] gi|184211674|gb|EDU08717.1| thymidylate synthase [Burkholderia pseudomallei 1655] gi|217396428|gb|EEC36445.1| thymidylate synthase [Burkholderia pseudomallei 576] gi|237504707|gb|ACQ97025.1| thymidylate synthase [Burkholderia pseudomallei MSHR346] gi|238524079|gb|EEP87514.1| thymidylate synthase [Burkholderia mallei GB8 horse 4] gi|242140420|gb|EES26822.1| thymidylate synthase [Burkholderia pseudomallei 1106b] gi|243061578|gb|EES43764.1| thymidylate synthase [Burkholderia mallei PRL-20] gi|254218657|gb|EET08041.1| thymidylate synthase [Burkholderia pseudomallei 1710a] Length = 323 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGAQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N QL R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323 >gi|83720929|ref|YP_442217.1| thymidylate synthase [Burkholderia thailandensis E264] gi|167581100|ref|ZP_02373974.1| thymidylate synthase [Burkholderia thailandensis TXDOH] gi|167619181|ref|ZP_02387812.1| thymidylate synthase [Burkholderia thailandensis Bt4] gi|257138410|ref|ZP_05586672.1| thymidylate synthase [Burkholderia thailandensis E264] gi|83654754|gb|ABC38817.1| thymidylate synthase [Burkholderia thailandensis E264] Length = 323 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 155/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAAEFRALGCKVWDANANENAQWLANPYRRGADDLGDVYGVQWRRWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRIVARFEEGGADKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P++ + + D L Sbjct: 241 GYSPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLELAERVPDYAKTGKYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 VEPSDFTLVGYRHHEPLSAPMAV 323 >gi|126440677|ref|YP_001059852.1| thymidylate synthase [Burkholderia pseudomallei 668] gi|167720616|ref|ZP_02403852.1| thymidylate synthase [Burkholderia pseudomallei DM98] gi|126220170|gb|ABN83676.1| thymidylate synthase [Burkholderia pseudomallei 668] Length = 323 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N QL R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323 >gi|209522037|ref|ZP_03270694.1| Thymidylate synthase [Burkholderia sp. H160] gi|209497520|gb|EDZ97718.1| Thymidylate synthase [Burkholderia sp. H160] Length = 323 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 100/323 (30%), Positives = 155/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDGNANQNAQWLANPYREGPDDLGDVYGVQWRKWPAYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ +P RR + AWN Sbjct: 121 ASASAQLADAQARGFRVITQFDEEGRSKVLLYKAIDQLRQCLDTIIENPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTRREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P++ I+ + + L Sbjct: 241 GYTPRWFSYFIGDAHIYENQLDMLHQQLKREPYESPRLAISDRVPEYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A +++ Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAI 323 >gi|326536377|ref|YP_004300818.1| Td thymidylate synthase [Acinetobacter phage 133] gi|299483458|gb|ADJ19552.1| Td thymidylate synthase [Acinetobacter phage 133] Length = 315 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 114/315 (36%), Positives = 159/315 (50%), Gaps = 51/315 (16%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M YLDL+R+V+ G D D RTGVGT + FG Q++ DL KGFP +TTK++ +KSV E+ Sbjct: 1 MKSYLDLMRNVLDNGEDVDDERTGVGTIALFGEQLKIDLRKGFPAVTTKRLAFKSVTAEM 60 Query: 60 LWFLRGDSNVSYLHR-----------HGVSIWDEWADKD---------GELGPIYGVQWR 99 LWFLRG +++ L +IWD + G +GP+YG WR Sbjct: 61 LWFLRGSNDLFELRAITHGESARYDADKKTIWDANYYQQAEKELGYTAGYMGPVYGNVWR 120 Query: 100 SWP-----------------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI---- 138 + +Y+ DQI +++ +P SRR + AW+ + Sbjct: 121 EFGQGTIRIERGDTKVESYDEYEVTGFDQIKAVLNEAIKNPGSRRLLTLAWDPKSVWGHD 180 Query: 139 ------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 DK LPPCH FQ ++NG + RS DVFLG PF+IASY+ L + ++ Sbjct: 181 DKYVKQDKPTLPPCHYGFQININNGHIDLLFLMRSVDVFLGKPFDIASYAELCHVFGRIL 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF---RYEDFTL 249 G I G+VH+Y NH +Q QLSR P+ LP + INP + L F +DF L Sbjct: 241 GKTPRYLIGQFGNVHIYKNHIDQCLEQLSREPKKLPTLWINPELKTLDDFEKATVDDFKL 300 Query: 250 RSYEPHAAILAKVSV 264 YE H I A ++V Sbjct: 301 IGYESHPNIKADMAV 315 >gi|187477016|ref|YP_785040.1| thymidylate synthase [Bordetella avium 197N] gi|115421602|emb|CAJ48112.1| thymidylate synthase [Bordetella avium 197N] Length = 323 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 161/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ +I G+ + +RTGV T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MRQYLDLVQSIIDQGAWQENRTGVRTLSLPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD+ A+++ +LGP+YGVQWR+WP Y Sbjct: 61 GFLRSARSAADFRALGCKVWDQNANENSQWLNNPYREGLDDLGPVYGVQWRNWPAYKLLR 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 +DQ+ + ++ +P RR + WN Sbjct: 121 ADRQAQISDALSRGYAKVAELDEAGVPQVLLYKAVDQLRQCLDTIHRNPSDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNASTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS---FRYE---- 245 G+ F + +GD H+Y NH + QL R P P+++++ I D + E Sbjct: 241 GYTPRWFSYFIGDAHIYENHLDMLREQLKREPHASPRLLLSDRIPDFRQTQRYEPEWLEH 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y+ HA + A ++V Sbjct: 301 VEPSDFSLEGYQHHAPLTAPMAV 323 >gi|332975745|gb|EGK12627.1| thymidylate synthase [Psychrobacter sp. 1501(2011)] Length = 283 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +++ + FPL+TT+K +WK+ + E Sbjct: 1 MKQYLDLCQRIVDEGVWVENERTGKRCLTVINADLNYNVGANEFPLVTTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG + + G + W+ A+++ ++G +YGVQ R W + G Sbjct: 61 LLGYLRGYDSAAQFRAIGCNTWNANANENEAWLANPYRKGKDDMGRVYGVQGRRWRNSVG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 DQ+ I +LR R I++ +N L PC F + GKL QR Sbjct: 121 EEFDQLHKIYDNLRNGIDDRGEILTFYNPGEFHMGCLRPCMHTHTFSLLGGKLYLTSSQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG FN L ++A + G + G+ H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGQNFNQIQVFTLLALMAQITGHEAGKAYHKIVNAHIYEDQLQLMRDVQLKREPY 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + Y+ H +I SV Sbjct: 241 PAPKLHINPEIKSLEDIETWVTLDDFRVEGYQYHESIAYPFSV 283 >gi|225027000|ref|ZP_03716192.1| hypothetical protein EUBHAL_01256 [Eubacterium hallii DSM 3353] gi|224955685|gb|EEG36894.1| hypothetical protein EUBHAL_01256 [Eubacterium hallii DSM 3353] Length = 276 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 14/272 (5%) Query: 4 YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ +I+ G D T T FG R+DLSK FP +T +K + +S Sbjct: 8 FIDMCSDIIENGYSTEGEKVRPKWPDGTYAYTIKKFGVVNRYDLSKEFPAITLRKTYIRS 67 Query: 55 VVHELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + +NV L IWDEWAD+DG +G YG Q Y +DQ+ Sbjct: 68 AIDEILWIWQKKSNNVHDLS---SHIWDEWADEDGSIGKAYGYQLGKKHKYKEGEMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P+SRR + + + + +M L PC F V +L+ L QRS D+ Sbjct: 125 RVLFDLKENPFSRRIMTNIYVHEDLHEMNLYPCAYSMTFNVTGNRLNAILNQRSQDILAA 184 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 +N+ Y+ L MM A V GF+ GE +H + D H+Y+ H + R P++ +N Sbjct: 185 NNWNVVQYAALLMMFAQVSGFEPGELVHVIADAHIYDRHIPIVKELIQRPVYPAPKVTLN 244 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P + D F +DFT+ YE I +++ Sbjct: 245 PEVKDFYKFTVDDFTIEDYEAGPQIKNIPIAI 276 >gi|294139696|ref|YP_003555674.1| thymidylate synthase [Shewanella violacea DSS12] gi|293326165|dbj|BAJ00896.1| thymidylate synthase [Shewanella violacea DSS12] Length = 283 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L +I G+ +RTG + + +++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLELCNRIIDEGTWIENERTGKRCLTVINADLVYNVENNEFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 MLGYIRGFDNAADFRKLGAKTWDANANDNLAWLNNPHRKGQDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L+ R I+S +N L PC F + L +QR Sbjct: 121 GTIDQLKKIVDNLKKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGKKPGQAYHKIVNAHIYEDQLDLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 + INP+I L +DF + +Y+ H AI SV Sbjct: 241 GPASLSINPDIKSLEDLETWVTMDDFEVSNYQHHDAIKYPFSV 283 >gi|119944280|ref|YP_941960.1| thymidylate synthase [Psychromonas ingrahamii 37] gi|166231727|sp|A1SS96|TYSY_PSYIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|119862884|gb|ABM02361.1| thymidylate synthase [Psychromonas ingrahamii 37] Length = 283 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYL L + ++ G + RTG + + +D+ + FP++TT+K +KS + E Sbjct: 1 MKQYLGLCQRIVDKGIWIENQRTGKRCLTVINADLEYDVGNNQFPMITTRKSFYKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L+ +LRG N + + G WD ++ + ++G +YG+Q RSW DG Sbjct: 61 LIGYLRGYDNAADFRKLGTKTWDANSNLNNAWLNNPYRKGEDDMGRVYGIQGRSWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ +V L R IV+ +N + L PC F + L YQR Sbjct: 121 GFIDQLKKVVDDLSNGIDDRGEIVTFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFALLALMAQITGKKAGMAYHKIVNAHIYEDQLALMRDVQLPRLPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + Y+ H AI SV Sbjct: 241 ASPQLKINPKIKSLQDLETWVTMDDFEVEGYQCHDAIKYPFSV 283 >gi|163752421|ref|ZP_02159613.1| thymidylate synthase [Shewanella benthica KT99] gi|161327680|gb|EDP98872.1| thymidylate synthase [Shewanella benthica KT99] Length = 283 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L +I G +RTG + + +++ K FPL+TT+K WK+ + E Sbjct: 1 MKQYLELCNRIIDEGCWIENERTGKRCLTVINADLVYNVEKNEFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L ++RG N + + G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 MLGYIRGFDNAADFRKLGAKTWDANANENQAWLNNPHRKGKDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L+ R I+S +N L PC F + L +QR Sbjct: 121 GTIDQLKKIVDNLKKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGKKPGQAYHKIVNAHIYEDQLELMRDVQLQREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 + INP+I L +DF + +Y+ H AI SV Sbjct: 241 GPASLSINPDIKSLEDLETWVTMDDFEVLNYQHHDAIKYPFSV 283 >gi|157960852|ref|YP_001500886.1| thymidylate synthase [Shewanella pealeana ATCC 700345] gi|189036945|sp|A8H1B4|TYSY_SHEPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157845852|gb|ABV86351.1| Thymidylate synthase [Shewanella pealeana ATCC 700345] Length = 283 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 90/283 (31%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G+ + RTG + + + + K FPL+TT+K +K+ + E Sbjct: 1 MKQYLDLCQRLIDEGTWVENSRTGKRCLTVINADLVYHVDKNEFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + G + W+ A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRAIGCNTWNANANDNQAWLDNPHRKGIDDMGRVYGVQGRAWSKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I+S +N L PC F + L +QR Sbjct: 121 GCIDQLRKIVDDLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLVGDTLHLTSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL-QLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + E QL R P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKPGTAFHKIVNAHIYEDQLELMQEVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 T P+++INPNI L +DF + YE H AI SV Sbjct: 241 TSPKLVINPNIKSLEDLETWVSIDDFEVTGYEHHEAISYPFSV 283 >gi|148978525|ref|ZP_01814977.1| thymidylate synthase [Vibrionales bacterium SWAT-3] gi|145962314|gb|EDK27595.1| thymidylate synthase [Vibrionales bacterium SWAT-3] Length = 283 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDNGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG + + G WD ++ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDSAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H L + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEAIKYPFSV 283 >gi|330447405|ref|ZP_08311054.1| thymidylate synthase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491596|dbj|GAA05551.1| thymidylate synthase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 283 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 90/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G +RTG + + +D++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLALCQRIVDDGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+ + ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDNAAQFRAIGCNTWNANANDNQAWLNNPHRKGEDDMGRVYGVQGRRWQKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N D L PC F + L YQR Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + YE H I SV Sbjct: 241 ASPQLKINPKIKSLEDLETWVTLDDFEVIGYEHHDVIQYPFSV 283 >gi|134094287|ref|YP_001099362.1| thymidylate synthase [Herminiimonas arsenicoxydans] gi|133738190|emb|CAL61235.1| thymidylate synthase (TS) (TSase) [Herminiimonas arsenicoxydans] Length = 324 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 104/324 (32%), Positives = 162/324 (50%), Gaps = 60/324 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 M QYLDL+R V+ G+ + +RTG+ T S G +RFDL GFP +TTK++ +KSV+ EL Sbjct: 1 MKQYLDLVRTVLDSGTWQENRTGIRTISIPGAMLRFDLQKDGFPAITTKRLAFKSVIGEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD-- 105 + FLR + + G +WD+ A+++ +LGP+YGVQWR WP Y Sbjct: 61 IGFLRASRSAAEFRALGCKVWDQNANENAEWLNNPYRLGEDDLGPVYGVQWRQWPAYKLL 120 Query: 106 --------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAW 133 IDQ+ + ++ +P SRR + W Sbjct: 121 DADNKLQIQDAQKRGFRLISAVNDEGIDKVLMYKAIDQLRDCLDTIINNPASRRILFHGW 180 Query: 134 NVALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 N A +D +ALP CH L+QF ++S LY RS D+ LG PFN+A + L ++ + Sbjct: 181 NCAELDAIALPACHLLYQFLPNQTTKEISLCLYIRSNDIGLGTPFNLAEAAALLHVVGRL 240 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LL 240 G+ F + +GD H+Y NH + + Q++R P P+++++ I D L Sbjct: 241 TGYTPKWFTYFIGDAHIYENHLDMLNEQMTREPYAAPRLVLSDRIPDYRVTGKYEPEWLE 300 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 DF+L +Y+ HA + A ++V Sbjct: 301 KLEPGDFSLENYQHHAPLSAPMAV 324 >gi|219871597|ref|YP_002475972.1| thymidylate synthase [Haemophilus parasuis SH0165] gi|254790239|sp|B8F6S2|TYSY_HAEPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|219691801|gb|ACL33024.1| thymidylate synthase [Haemophilus parasuis SH0165] Length = 283 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G +RTG + + +D++KG FPL+TT+K WK+ + E Sbjct: 1 MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLTYDVAKGEFPLVTTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P G Sbjct: 61 LLGYIRGYDNAADFRQLGTKSWDANANENAAWLTNPHRKGEDDMGLVYGAVGRNFPKVGG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + G Q G+ H + + H+Y + E D+QL R+P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHQAGQAFHKIVNAHIYEDQLELMRDVQLKRTPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P + INP+I L DF + YE H +I SV Sbjct: 241 KAPTLKINPDIKSLEDLETWVTLADFEVEGYEYHPSIQYPFSV 283 >gi|86147416|ref|ZP_01065729.1| thymidylate synthase [Vibrio sp. MED222] gi|218708561|ref|YP_002416182.1| thymidylate synthase [Vibrio splendidus LGP32] gi|254790257|sp|B7VJ78|TYSY_VIBSL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|85834844|gb|EAQ52989.1| thymidylate synthase [Vibrio sp. MED222] gi|218321580|emb|CAV17532.1| Thymidylate synthase [Vibrio splendidus LGP32] Length = 283 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVNDGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD ++ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H L + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEAIKYPFSV 283 >gi|254362290|ref|ZP_04978403.1| thymidylate synthase [Mannheimia haemolytica PHL213] gi|261492795|ref|ZP_05989342.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494839|ref|ZP_05991317.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093867|gb|EDN74799.1| thymidylate synthase [Mannheimia haemolytica PHL213] gi|261309550|gb|EEY10775.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311477|gb|EEY12633.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 283 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + +D+ KG FPL+TT++ +WK+ + E Sbjct: 1 MKQYLDLCNRIVSEGKWVANERTGKHCLTVINADLTYDVEKGEFPLVTTRRSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG SN + + G WD A+++ ++G +YG R++P DG Sbjct: 61 LLGYIRGYSNAADFRQLGTKSWDANANENAQWLANPYRKGEDDMGLVYGAVGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKKGIDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++IINP+I L +DF + YE H AI SV Sbjct: 241 NAPKLIINPDIKSLEDLETWVSLDDFKVEGYEYHPAIQYPFSV 283 >gi|18000048|gb|AAL54880.1|AF064791_1 thymidylate synthase [Pasteurella multocida] Length = 283 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M YL+L + ++ G +RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKHYLELCQRIVDEGVWVENERTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENSAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +LR R I++ +N + L PC F + L YQR Sbjct: 121 ETVDQLRKIVNNLRNGIDDRGEIMTFFNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + + +QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIINAHIYEDQLDLMKNVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LPQ+ INP I L +DF + Y+ H AI SV Sbjct: 241 PLPQLHINPEIKTLEDLETWVTMDDFKVTGYQCHDAIKYPFSV 283 >gi|332308159|ref|YP_004436010.1| thymidylate synthase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175488|gb|AEE24742.1| thymidylate synthase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 283 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G + RTG + + +D++KG FPL+TT+K +KS + E Sbjct: 1 MKQYLDLCQRIVDEGVWVNNERTGKKCLTVINADLTYDVAKGEFPLVTTRKSFYKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 ++ ++RG N + + G S WD A+++ + G IYG R++P DG Sbjct: 61 MIGYIRGYDNAADFRKIGTSTWDANANQNQAWLDNPHRRGEDDCGLIYGKIGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID ++ I+ L+ R I + ++ L PC F + + L QR Sbjct: 121 GSIDLLAKIIHDLKNGIDDRGEIFTFYHPGAFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ L ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGKKAGKAYHKIVNAHIYEDQLALMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 +P++IINP+I L +DF + YE H AI SV Sbjct: 241 GIPKLIINPDIKSLKDLETWVTMDDFNIEGYEHHPAIKYPFSV 283 >gi|59711067|ref|YP_203843.1| thymidylate synthase [Vibrio fischeri ES114] gi|59479168|gb|AAW84955.1| thymidylate synthetase [Vibrio fischeri ES114] Length = 285 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 19/282 (6%) Query: 2 HQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL + ++ G+ +RTG + + +D+ G FPL+TT+K WK+ V E+ Sbjct: 4 KQYLDLCQRIVDEGTWIENERTGKRCLTVINADLTYDVENGVFPLVTTRKSFWKAAVAEM 63 Query: 60 LWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDGN 107 + ++RG + + G WD D ++G +YGVQ RSW +G Sbjct: 64 IGYIRGYDSAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRSWAKPNGE 123 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQ+ I+ L R I++ +N D L PC F + L QRS Sbjct: 124 FVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQRS 183 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPRT 226 DV LG+ FN+ L ++A + G + G+ H + + H+Y + E +QL R P Sbjct: 184 CDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQSVQLKREPLQ 243 Query: 227 LPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H AI SV Sbjct: 244 APIFKINPEIKSLEDLETWVTMDDFEVIGYESHEAIKYPFSV 285 >gi|237809696|ref|YP_002894136.1| thymidylate synthase [Tolumonas auensis DSM 9187] gi|259550815|sp|C4LD19|TYSY_TOLAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|237501957|gb|ACQ94550.1| thymidylate synthase [Tolumonas auensis DSM 9187] Length = 283 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 132/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G + RT + + +D+ FP++TT+K WK+ + E Sbjct: 1 MKQYLDLCQRIIDEGVWIENQRTNKRCLTVINADLVYDVRNNQFPIITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+++ ++G +YGVQ R W +DG Sbjct: 61 LLGYIRGYDNAADFRALGTKSWDANANENEAWLKNPARKGLDDMGRVYGVQGRHWKTHDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ N + L PC F + L YQR Sbjct: 121 TELDQLGKIVANLSKGIDDRGEILTFHNPGEFNLGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTLLALMAQITGNKPGLAYHKIVNAHIYEDQIELMRDVQLKRKPY 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + Y+ H AI SV Sbjct: 241 PSPKLEINPDIKSLKDLETWVTLDDFNVTGYQHHDAIKYPFSV 283 >gi|312884030|ref|ZP_07743747.1| thymidylate synthase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368488|gb|EFP96023.1| thymidylate synthase [Vibrio caribbenthicus ATCC BAA-2122] Length = 283 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G +RTG + + +D++ FPL+TT+K +WK+ V E Sbjct: 1 MRQYLDLCQRIVQHGEWIENERTGKRCLTVINADLTYDVANHQFPLVTTRKSYWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+++ ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANQNEAWLKNAYRKGSDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ I++ L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIIEDLARGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYAFLAIVAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP+I L +DF++ YE H I SV Sbjct: 241 KAPSFQINPDIKSLEDLETWVTLDDFSVEGYEHHEPIQYPFSV 283 >gi|187903049|ref|YP_001883340.1| thymidylate synthase [Musca domestica salivary gland hypertrophy virus] gi|187384698|gb|ACD03471.1| thymidylate synthase [Musca domestica salivary gland hypertrophy virus] Length = 294 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 109/284 (38%), Positives = 165/284 (58%), Gaps = 24/284 (8%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWF 62 YL L+R V++ G+ + +RTGV T+ FG Q+R+DL +LTTKKV ++S + ELLWF Sbjct: 10 YLTLVRRVLRDGTLKSNRTGVDTKYIFGDQLRYDLRDNRIAMLTTKKVFFRSALEELLWF 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102 LRGD+N + L GV+IW + + LGPIYG QWR + Sbjct: 70 LRGDTNQANLAAKGVNIWRGNSTREYLDSRKLPYPEHESLGPIYGFQWRHFGARYIDCHT 129 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLS 160 DY G +DQ++ + ++ +P SRR I++AWN +DKM LPPCH QF V+ G+LS Sbjct: 130 DYTGQGVDQLAQCMHQIQYEPSSRRMIMTAWNPNDLDKMVLPPCHMSIQFSVNEKLGELS 189 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 + QRS D+ LG+PFN+ SYSL+ +LA G + GE + + GD+H+Y H + A Q+ Sbjct: 190 GHMTQRSADLMLGVPFNLVSYSLMLHILAHKFGLKAGELVTSYGDLHIYVPHIKNAMRQV 249 Query: 221 SRSPRTLPQMIIN-PNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 SR P PQ+ + + +DF +++Y H+ + +++ Sbjct: 250 SRLPYASPQIELKFGRDKRVEELTVDDFAVKNYRHHSQLEYEMA 293 >gi|260913764|ref|ZP_05920240.1| thymidylate synthase [Pasteurella dagmatis ATCC 43325] gi|260632303|gb|EEX50478.1| thymidylate synthase [Pasteurella dagmatis ATCC 43325] Length = 283 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G + RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKQYLELCQRIVDEGVWIENKRTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+ + ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANDNEAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ +V +L R I++ N D L PC F + L YQR Sbjct: 121 ETIDQLRKVVNNLNKGIDDRGEIITFLNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E +QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKPGKAYHKIINAHIYEDQLELMKNVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LPQ+ INP+I L +DF + Y+ H I SV Sbjct: 241 PLPQLEINPDIKTLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283 >gi|311108781|ref|YP_003981634.1| thymidylate synthase [Achromobacter xylosoxidans A8] gi|310763470|gb|ADP18919.1| thymidylate synthase [Achromobacter xylosoxidans A8] Length = 323 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 155/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G+ + +RTG+ T S G +RFDL KGFP +TTKK+ +KS + E++ Sbjct: 1 MKQYLDLVQSILDTGAWQENRTGIRTLSMPGASLRFDLQKGFPAVTTKKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG-- 106 FLR + + G +WD+ A+++ +LGP+YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRELGCKVWDQNANENSQWLANPYREGPDDLGPVYGVQWRQWPAYKMLD 120 Query: 107 --------------------------------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 +DQ+ + ++ P RR + WN Sbjct: 121 ASRPAQIADALSRGYAQVAELEEGGVPKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241 G+ F + +GD H+Y NH QL+R P P ++++ I D Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTREPYEAPTLVLSDRIPDFAVTGRYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y HA + A ++V Sbjct: 301 VEPGDFSLSGYTHHAPLTAAMAV 323 >gi|134276945|ref|ZP_01763660.1| thymidylate synthase [Burkholderia pseudomallei 305] gi|134250595|gb|EBA50674.1| thymidylate synthase [Burkholderia pseudomallei 305] Length = 323 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGAQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S L+ RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLFIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N QL R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323 >gi|160946510|ref|ZP_02093719.1| hypothetical protein PEPMIC_00474 [Parvimonas micra ATCC 33270] gi|158447626|gb|EDP24621.1| hypothetical protein PEPMIC_00474 [Parvimonas micra ATCC 33270] Length = 276 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 12/271 (4%) Query: 4 YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++ + + +++ G D D T T FG R++L++ FP LT +K K Sbjct: 8 FISMCKDILENGVDTKGEKVRPVWEDGTKAYTIKKFGVVNRYNLAEEFPALTLRKTAIKL 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 E+LW + SN + +WDEWAD++G +G YG Q Y + DQ+ Sbjct: 68 CTDEMLWIWQKKSN--NIKDLKSHVWDEWADENGSIGKAYGYQLGVKHKYKEGMFDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 ++ L+ +PYSRR I + + + +M L PC F V KL+ L QRS D+ Sbjct: 126 VIYDLKNNPYSRRIITNIYVHEDLSEMNLYPCAYSMTFNVTGNKLNAILNQRSQDILTAN 185 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 +N+ Y++L MLA + GE +H + D H+Y+ H ++R P++ +NP Sbjct: 186 NWNVCQYAILIHMLARECNLEVGELVHVIADAHIYDRHVPIIKELITREKFPAPKVTLNP 245 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 ++ + F +D + +Y+ I +++ Sbjct: 246 DVKNFYDFTSDDVIIENYKCGEQIKDIPIAI 276 >gi|91227678|ref|ZP_01261955.1| thymidylate synthase [Vibrio alginolyticus 12G01] gi|262395196|ref|YP_003287050.1| thymidylate synthase [Vibrio sp. Ex25] gi|269966616|ref|ZP_06180697.1| thymidylate synthase [Vibrio alginolyticus 40B] gi|91188457|gb|EAS74751.1| thymidylate synthase [Vibrio alginolyticus 12G01] gi|262338790|gb|ACY52585.1| thymidylate synthase [Vibrio sp. Ex25] gi|269828801|gb|EEZ83054.1| thymidylate synthase [Vibrio alginolyticus 40B] Length = 283 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV L R I++ +N L PC F + + L QR Sbjct: 121 GHVDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 KAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYPFSV 283 >gi|167919927|ref|ZP_02507018.1| thymidylate synthase [Burkholderia pseudomallei BCC215] Length = 323 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 153/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N Q R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQFEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323 >gi|325662312|ref|ZP_08150921.1| thymidylate synthase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471314|gb|EGC74537.1| thymidylate synthase [Lachnospiraceae bacterium 4_1_37FAA] Length = 282 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 89/279 (31%), Positives = 136/279 (48%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++++ R +I G+ D + T FG R+DLSK FP LT ++ Sbjct: 6 KVFIEMCRDIIDNGTSTEGEKVRPKWEDGSYAYTIKKFGVVNRYDLSKEFPALTLRRTGI 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS V E+LW + SN +H IWD WAD+DG +G YG Q + Y ++DQ+ Sbjct: 66 KSCVDEMLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMQVKHQYREGMMDQV 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166 ++ L+ +PYSRR + + + + +M L PC F V + L+ L QR Sbjct: 124 DRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKREDSEKLVLNGILNQR 183 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV +N+ Y++L MLA V Q GEF+H + D H+Y+ H + + R P Sbjct: 184 SQDVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHIPLIEELIKREPLP 243 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P+ +NP+I D +F ED L Y+ I ++V Sbjct: 244 APKFWLNPDIKDFYAFTPEDVRLDDYQTGPQIKNIPIAV 282 >gi|152980241|ref|YP_001352883.1| thymidylate synthase [Janthinobacterium sp. Marseille] gi|151280318|gb|ABR88728.1| thymidylate synthase [Janthinobacterium sp. Marseille] Length = 324 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 104/324 (32%), Positives = 162/324 (50%), Gaps = 60/324 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 M QYLDL+R V+ G+ + +RTG+ T S G +RFDL GFP +TTK++ +KSV+ EL Sbjct: 1 MKQYLDLVRTVLDTGTWQENRTGIRTISIPGAMLRFDLQKDGFPAITTKRLAFKSVIGEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD-- 105 + FLR + + G +WD+ A+++ +LGP+YGVQWR WP Y Sbjct: 61 IGFLRATRSAAEFRELGCKVWDQNANENTEWLNNPYRTGPDDLGPVYGVQWRQWPAYKLL 120 Query: 106 --------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAW 133 IDQ+ + ++ +P SRR + W Sbjct: 121 DADQQAQIDDAQKRGFRVVSTVNDEGKDKVLLYKAIDQLRDCLDTIIKNPGSRRILFHGW 180 Query: 134 NVALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 N A +D +ALP CH L+QF ++S LY RS D+ LG PFN+A + L ++ + Sbjct: 181 NCADLDAIALPACHLLYQFIPNATTKEISLCLYIRSNDIGLGTPFNLAEAAALLHVVGRL 240 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------L 240 G+ F + +GD H+Y NH + + Q++R+P PQ++++ I D Sbjct: 241 TGYTPKWFTYFIGDAHIYENHLDMLNEQMTRAPHPAPQLVLSDRIPDFAVTGKYEPEWLE 300 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 DF+L +Y+ HA + A ++V Sbjct: 301 KLEPGDFSLENYQHHAPLTAPMAV 324 >gi|295094923|emb|CBK84014.1| thymidylate synthase [Coprococcus sp. ART55/1] Length = 276 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 12/271 (4%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ + +I G D T T FG R+DLSK FP +T +K + KS Sbjct: 8 FINMCKDIIDNGYSTEGEKVRPKWEDGTYAYTIKRFGVVNRYDLSKEFPAITLRKTYVKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 + ELLW + SN +H IWD WAD++G +G YG Q Y ++DQ+ Sbjct: 68 AIDELLWIWQKKSN--NVHDLKSHIWDSWADENGSIGKAYGYQLGVKHKYKEGMMDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 ++ L+ +PYSRR + + + + +M L PC F V +L+ L QRS DV Sbjct: 126 LIYDLKNNPYSRRMLTNIYVHQDLSEMNLYPCAYSMTFNVTGDRLNAILNQRSQDVLAAN 185 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 +N+ Y++L MLA V GF+ GE +H + D H+Y+ H ++R P+ +NP Sbjct: 186 NWNVVQYAVLVHMLAQVTGFKPGELVHVIADAHIYDRHIPIVKELITRPTHPAPRFYMNP 245 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 ++ D F +DF + YE I +++ Sbjct: 246 DVKDFYDFTLDDFRIEDYETGPQIKNIPIAI 276 >gi|54307786|ref|YP_128806.1| thymidylate synthase [Photobacterium profundum SS9] gi|62901317|sp|Q6LUM1|TYSY_PHOPR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|46912209|emb|CAG19004.1| putative thymidylate synthetase (thyA) [Photobacterium profundum SS9] Length = 283 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 92/283 (32%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G + RT + + FD++ FPL+TT+K WKS + E Sbjct: 1 MKQYLELCQRIVDDGVWIENKRTNKRCLTVVNADLTFDVANNQFPLITTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ RSW DG Sbjct: 61 LLGYIRGYDNAADFRALGTKTWDMNANDNLAWLNNPHRKGEDDMGRVYGVQGRSWQKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + IDQ+ IV +L R I++ +N D L PC F + L YQR Sbjct: 121 STIDQLRKIVDNLSEGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSRSPR 225 S DV LG+ FN L ++A + G + G H + + H+Y + D+QL+R+P Sbjct: 181 SCDVPLGLNFNQVQVYTLLALVAQITGKKPGLAYHKIINAHIYEDQLSLLRDVQLTRTPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++IINP I L +DF + YE H AI SV Sbjct: 241 AAPKLIINPKIKCLEDLETWVTMDDFDVIGYEHHEAIKYPFSV 283 >gi|115524162|ref|YP_781073.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] gi|115518109|gb|ABJ06093.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] Length = 201 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 114/176 (64%), Positives = 143/176 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 MHQY DLL ++ G+++ DRTG GT S FG+QMRF L GFP+LTTK++ K++VHELL Sbjct: 1 MHQYHDLLERILSDGAEKHDRTGTGTLSVFGHQMRFALDAGFPMLTTKRLPLKAIVHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N+ YL +GVSIWDEWAD +G+LGP+YG QWRSWP DG IDQI+ +V+ ++ Sbjct: 61 WFLKGDTNIKYLKDNGVSIWDEWADANGDLGPVYGAQWRSWPTQDGGSIDQIAGVVEMIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 +P SRR IV+AWN A ++KMALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+ F Sbjct: 121 RNPDSRRLIVTAWNPAEVEKMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVGF 176 >gi|187924930|ref|YP_001896572.1| thymidylate synthase [Burkholderia phytofirmans PsJN] gi|187716124|gb|ACD17348.1| Thymidylate synthase [Burkholderia phytofirmans PsJN] Length = 323 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 101/323 (31%), Positives = 153/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ +P RR + AWN Sbjct: 121 ANAGAQLADATARGFQVVTEFEEDGSNKILLYKAIDQLRQCLDTIMHNPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF + ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFLPNAVTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P I+ + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPSFAISERVPEYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAV 323 >gi|307249319|ref|ZP_07531313.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858613|gb|EFM90675.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 283 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + ++++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVAAGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P DG Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQNSAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ + L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + G + G+ H + + H+Y + FE D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + YE H AI SV Sbjct: 241 ASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 283 >gi|37678863|ref|NP_933472.1| thymidylate synthase [Vibrio vulnificus YJ016] gi|50401487|sp|Q7MNN6|TYSY_VIBVY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|37197604|dbj|BAC93443.1| thymidylate synthase [Vibrio vulnificus YJ016] Length = 283 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ D ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGDDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|167895299|ref|ZP_02482701.1| thymidylate synthase [Burkholderia pseudomallei 7894] Length = 323 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 153/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGIDDLGDVYGVQWRRWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF V+ ++S LY RS DV LG PFN+A + L ++ + Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N Q R P P++ I + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQFEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y H + A ++V Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323 >gi|326794010|ref|YP_004311830.1| Thymidylate synthase [Marinomonas mediterranea MMB-1] gi|326544774|gb|ADZ89994.1| Thymidylate synthase [Marinomonas mediterranea MMB-1] Length = 283 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G + RTG + + +++ G FPL+TT+K +WKS + E Sbjct: 1 MKQYLDLCQRILDEGVWVDNERTGKRCLTVINADLTYNVGAGEFPLVTTRKSYWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L +LRG N + + G WD A+++ ++G YG R++P DG Sbjct: 61 ILGYLRGYDNAADFRQLGTKTWDANANENQVWLNNPYRKGEDDMGLCYGAIGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID + IV L+ +R I++ ++ L PC F + L QR Sbjct: 121 GSIDLLKQIVHDLKRGVDNRGEILTFYHPGAFHMACLRPCMYSHHFSLLGETLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225 S DV LG+ FN+ +L ++A + G + G H L + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVLLALVAQITGKKAGYAYHKLVNSHIYEDQLAPMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + YE H AI SV Sbjct: 241 EPPRLKINPDIKTLEDIETWVTMDDFEVEGYECHDAIQYPFSV 283 >gi|27363979|ref|NP_759507.1| thymidylate synthase [Vibrio vulnificus CMCP6] gi|29611889|sp|Q8DER9|TYSY_VIBVU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|27360096|gb|AAO09034.1| thymidylate synthase [Vibrio vulnificus CMCP6] Length = 283 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|28897298|ref|NP_796903.1| thymidylate synthase [Vibrio parahaemolyticus RIMD 2210633] gi|260363899|ref|ZP_05776647.1| thymidylate synthase [Vibrio parahaemolyticus K5030] gi|260876263|ref|ZP_05888618.1| thymidylate synthase [Vibrio parahaemolyticus AN-5034] gi|260897576|ref|ZP_05906072.1| thymidylate synthase [Vibrio parahaemolyticus Peru-466] gi|260901099|ref|ZP_05909494.1| thymidylate synthase [Vibrio parahaemolyticus AQ4037] gi|31077025|sp|Q87SA0|TYSY_VIBPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|28805507|dbj|BAC58787.1| thymidylate synthase [Vibrio parahaemolyticus RIMD 2210633] gi|308084906|gb|EFO34601.1| thymidylate synthase [Vibrio parahaemolyticus Peru-466] gi|308092896|gb|EFO42591.1| thymidylate synthase [Vibrio parahaemolyticus AN-5034] gi|308107467|gb|EFO45007.1| thymidylate synthase [Vibrio parahaemolyticus AQ4037] gi|308112969|gb|EFO50509.1| thymidylate synthase [Vibrio parahaemolyticus K5030] gi|328472062|gb|EGF42939.1| thymidylate synthase [Vibrio parahaemolyticus 10329] Length = 283 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYPFSV 283 >gi|186475553|ref|YP_001857023.1| thymidylate synthase [Burkholderia phymatum STM815] gi|184192012|gb|ACC69977.1| Thymidylate synthase [Burkholderia phymatum STM815] Length = 323 Score = 257 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 101/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ GS + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGSWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRALGCKVWDANANENAQWLANPYREGPDDLGDVYGVQWRRWPAYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ +P RR + AWN Sbjct: 121 ATASAQLEDAASRGYAPVTEFEEDGMRKVLLYKAIDQLRQCLDAIMHNPSDRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A+++++ALP CH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLEEIALPACHLLYQFLPNASKREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P PQ I+ + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTRDPYESPQFAISERVPDYTKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A +++ Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAI 323 >gi|32709399|gb|AAP86960.1| tymidylate synthase [Haemophilus parasuis] Length = 283 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G +RTG + + +D++KG FPL+TT+K WK+ + E Sbjct: 1 MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLIYDVAKGEFPLVTTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P G Sbjct: 61 LLGYIRGYDNAADFRQLGTKSWDANANENAAWLANPHRKGEDDMGLVYGAVGRNFPKVGG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHLGCLRPCLHSHHFSLLDGTLYLNSIQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + G Q G+ H + + H+Y + E D+QL R+P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHQAGQAFHKIVNAHIYEDQLELMRDVQLKRTPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 P + INP+I L DF + YE H +I SV Sbjct: 241 KAPTLKINPDIKSLEDLEIWVTLADFEVEGYEYHPSIQYPFSV 283 >gi|84393972|ref|ZP_00992712.1| thymidylate synthase [Vibrio splendidus 12B01] gi|84375416|gb|EAP92323.1| thymidylate synthase [Vibrio splendidus 12B01] Length = 283 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVNDGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD ++ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H L + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEVIKYPFSV 283 >gi|295107966|emb|CBL21919.1| thymidylate synthase [Ruminococcus obeum A2-162] Length = 282 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 85/277 (30%), Positives = 137/277 (49%), Gaps = 18/277 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ + VI+ G+ D T T FG R+DL + FP LT +K KS Sbjct: 8 FINMCKDVIENGTSTEGEKVRPVWEDGTPAYTIKRFGVVNRYDLREEFPALTLRKTALKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 + E+LW + SN +H IWD WAD++G +G YG Q + Y ++DQ+ Sbjct: 68 AMDEILWIWQKKSN--NIHDLHSHIWDSWADENGSIGKAYGYQLQVKHQYKEGMMDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSG 168 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 126 VLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLTLNAVLNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+ +N+ YS+L MM+A V G + GE +H + D H+Y+ H +SR+P P Sbjct: 186 DILAANNWNVCQYSILLMMIAQVCGMEAGELVHVIADCHIYDRHVPVIKELISRTPYPAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 + +NP I + F +D + +Y+ I ++V Sbjct: 246 TVRLNPEIKNFYDFTTDDLIVENYQTWPQIKNIPIAV 282 >gi|126207603|ref|YP_001052828.1| thymidylate synthase [Actinobacillus pleuropneumoniae L20] gi|303249819|ref|ZP_07336023.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251642|ref|ZP_07533547.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256140|ref|ZP_07537927.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|126096395|gb|ABN73223.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302651386|gb|EFL81538.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860839|gb|EFM92847.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865321|gb|EFM97217.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 283 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + ++++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P DG Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQNLAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ + L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQLELMRDVQLKRKPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + YE H AI SV Sbjct: 241 ASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 283 >gi|320157357|ref|YP_004189736.1| thymidylate synthase [Vibrio vulnificus MO6-24/O] gi|319932669|gb|ADV87533.1| thymidylate synthase [Vibrio vulnificus MO6-24/O] Length = 283 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL+L R ++ G +RTG + + ++++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYNVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|327409969|ref|YP_004347389.1| dihydrofolate reductase-thymidylate synthase [Lausannevirus] gi|326785143|gb|AEA07277.1| dihydrofolate reductase-thymidylate synthase [Lausannevirus] Length = 446 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 118/283 (41%), Positives = 158/283 (55%), Gaps = 22/283 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL LL V+ +G +R+DRTG GT+S F + F ++S+ FPLLT KK +W ++ ELLWF Sbjct: 164 YLALLSQVVNYGDERQDRTGTGTKSLFAKTLHFPNVSENFPLLTVKKTNWDKILSELLWF 223 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------WP 102 L G ++ + L G IWD A K+ G+ GPIY QWR Sbjct: 224 LSGSTDATILKEKGNDIWDGNASKEFQEKVGLSHYEEGDCGPIYPFQWRHAGAKYVDCKK 283 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G DQI +V+ ++ DP SRR ++ +WNVA +DKM LPPCH FQ YV K+ Q Sbjct: 284 DYTGEGKDQILEMVRLIQEDPTSRRILLESWNVADLDKMVLPPCHKTFQVYVRGDKIDGQ 343 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +YQRS D+ LG+PFNIASY+ L +LA G G GDVH+Y NH E A L R Sbjct: 344 VYQRSADLALGVPFNIASYACLLSLLAKRTGKSAGNLTLCFGDVHVYKNHMENAQKMLER 403 Query: 223 SPRTLPQMII-NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P P + I N L DF L+ Y+ ++A+ ++V Sbjct: 404 VPHRPPILEIVNIADDTLKKLEPSDFVLKDYKSYSALNFAMAV 446 >gi|261344767|ref|ZP_05972411.1| hypothetical protein PROVRUST_06031 [Providencia rustigianii DSM 4541] gi|282567211|gb|EFB72746.1| thymidylate synthase [Providencia rustigianii DSM 4541] Length = 283 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M YL+L + +I G + RTGV + + +D+ + FPL+TT+K +K+ + E Sbjct: 1 MKPYLELCQRIIDEGQWVENKRTGVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+++ ++G +YGVQ R+W DG Sbjct: 61 LLGYLRGYDNAAQFREIGCNTWNANANENPAWLANPHRKGEDDMGRVYGVQGRTWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ +V +L+ R I++ +N + L PC F + L YQR Sbjct: 121 THLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R P Sbjct: 181 SCDVPLGLNFNQVQCFVLLALIARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPY 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF L Y+ H AI +V Sbjct: 241 PSPRLTINPEIKTLEDLETWVTTDDFMLDGYQCHEAIKYPFTV 283 >gi|221117830|ref|XP_002168778.1| PREDICTED: similar to thymidylate synthase, partial [Hydra magnipapillata] Length = 197 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 103/241 (42%), Positives = 131/241 (54%), Gaps = 44/241 (18%) Query: 24 VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83 GT S FG QMRF+L + FPLLTTK+V WK VV ELLWF+ G ++ + L + GV IW Sbjct: 1 TGTLSIFGGQMRFNLRESFPLLTTKRVFWKGVVEELLWFISGSTDGNILAQKGVQIW--- 57 Query: 84 ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 + R + N I MAL Sbjct: 58 --------------------------------------NSNGTREFLDKCN---IPLMAL 76 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 PPCH QFYV NG+LSCQ+YQRS D+ LGIPFNIASYSLLT ++A V + G+FIHTL Sbjct: 77 PPCHSFCQFYVANGELSCQMYQRSCDMGLGIPFNIASYSLLTYIIAHVCNLKPGDFIHTL 136 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 GD H+YNNH Q+ RSPR P++ I + ++ F+ +DF L Y PH I ++ Sbjct: 137 GDAHVYNNHVSALKEQIGRSPRPFPKLNIKRKVENIDDFKSDDFELIGYNPHQKIKMAMA 196 Query: 264 V 264 V Sbjct: 197 V 197 >gi|226323905|ref|ZP_03799423.1| hypothetical protein COPCOM_01680 [Coprococcus comes ATCC 27758] gi|225207454|gb|EEG89808.1| hypothetical protein COPCOM_01680 [Coprococcus comes ATCC 27758] Length = 282 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 88/279 (31%), Positives = 130/279 (46%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++++ R +I G+ D T T FG R+DL K FP LT ++ Sbjct: 6 KVFIEMCRDIIDNGTSTEGEKVRPRWEDGTPAYTVKKFGVVNRYDLRKEFPALTLRRTGI 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS ELLW + SN +H IWD WAD+DG +G YG Q Y ++DQ+ Sbjct: 66 KSCTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMGVKHVYKEGMMDQV 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166 ++ L+ +PYSRR + + + + +M L PC F V K L+ L QR Sbjct: 124 DRVLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEKGSDKLTLNGILNQR 183 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV +N+ Y++L MLA V Q GEF+H + D H+Y+ H + +SR Sbjct: 184 SQDVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHISLIEELISRETHP 243 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P+ +NP + D F +D L Y I ++V Sbjct: 244 APKFWLNPEVKDFYQFTPDDVRLDDYVTGPQIKNIPIAV 282 >gi|15601944|ref|NP_245016.1| thymidylate synthase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431942|sp|P57808|TYSY_PASMU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|12720288|gb|AAK02163.1| ThyA [Pasteurella multocida subsp. multocida str. Pm70] Length = 283 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M YL+L + ++ G + RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MKHYLELCQRIVDEGVWVENARTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGTKTWDANANENSAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +LR R I++ +N + L PC F + L YQR Sbjct: 121 ETVDQLRKIVNNLRNGIDDRGEIMTFFNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + + +QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIINAHIYEDQLDLMKNVQLKRDPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LPQ+ INP I L +DF + Y+ H AI SV Sbjct: 241 PLPQLHINPEIKTLEDLETWVTMDDFKVTGYQCHDAIKYPFSV 283 >gi|152978403|ref|YP_001344032.1| thymidylate synthase [Actinobacillus succinogenes 130Z] gi|171704255|sp|A6VMA0|TYSY_ACTSZ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|150840126|gb|ABR74097.1| Thymidylate synthase [Actinobacillus succinogenes 130Z] Length = 283 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 83/283 (29%), Positives = 132/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G + RTG + + ++ + FP++TT+K +WK+ + E Sbjct: 1 MRQYLDLCQRIVDEGVWLENQRTGKRCLTVINADLTYNAAANEFPIITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNPVRKGVDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV L R I++ N D L PC F + L YQR Sbjct: 121 ETVDQLRKIVDDLSRGIDDRGEILTFLNPGEFDLGCLRPCMYSHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKPGQAYHKIVNAHIYEDQLDLMRDVQLKRRPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + YE H I SV Sbjct: 241 PSPRLEINPDIKTLEDLETWVTLDDFNVVGYECHEPIKYPFSV 283 >gi|149911436|ref|ZP_01900053.1| thymidylate synthase [Moritella sp. PE36] gi|149805467|gb|EDM65474.1| thymidylate synthase [Moritella sp. PE36] Length = 283 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + +D++ FPL+TT+K WKS + E Sbjct: 1 MKQYLDLCNRIVSEGVWVENERTGKRCLTVINADLTYDVANNEFPLVTTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 ++ ++RG N + G WD A+ + ++G +YG R+W G Sbjct: 61 IIGYIRGYDNAADFRALGTKTWDANANDNPAWLANPHRKGKDDMGYVYGACARNWVKPQG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + I+ L +R I++ +N + L PC F + L QR Sbjct: 121 GTVDLLRQIIDDLSNGIDNRGEILTFFNPGAFELGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ +L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVHVLLALVAQITGHKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP++ INP I L +DF + Y+ H AI SV Sbjct: 241 QLPKLHINPKIKTLEDLETWVTMDDFEVTDYQHHDAIKYPFSV 283 >gi|317405520|gb|EFV85827.1| thymidylate synthase [Achromobacter xylosoxidans C54] Length = 323 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 161/323 (49%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL++ ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + E++ Sbjct: 1 MKQYLDLVQSILDTGAWQENRTGIRTLSMPGASLRFDLQQGFPAVTTKKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 FLRG + + G +WD+ A+++ +LGP+YGVQWR WP Sbjct: 61 GFLRGVRSAAEFRELGCKVWDQNANENAQWLANPYREGPDDLGPVYGVQWRQWPAYKLLD 120 Query: 103 -DYDG---------------------------NVIDQISSIVQSLRADPYSRRHIVSAWN 134 D DG +DQ+ + ++ P RR + WN Sbjct: 121 ADRDGQIADALGRGYTKVADLQEGGASKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A I++MALPPCH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS---FRYE---- 245 G+ F + +GD H+Y NH QL+R+P P++ ++ I D + E Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTRTPLEAPRLALSDRIPDFAQTGRYEPEWLEK 300 Query: 246 ----DFTLRSYEPHAAILAKVSV 264 DF+L Y HA + A ++V Sbjct: 301 VEPGDFSLAGYTHHAPLTAPMAV 323 >gi|261250328|ref|ZP_05942904.1| thymidylate synthase [Vibrio orientalis CIP 102891] gi|260939444|gb|EEX95430.1| thymidylate synthase [Vibrio orientalis CIP 102891] Length = 283 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNADDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 INP I L +DF + YE H AI SV Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHEAIKYPFSV 283 >gi|91784762|ref|YP_559968.1| thymidylate synthase [Burkholderia xenovorans LB400] gi|91688716|gb|ABE31916.1| thymidylate synthase [Burkholderia xenovorans LB400] Length = 323 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ ++S V EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFRSAVGELI 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLN 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ +P RR + AWN Sbjct: 121 ADASAQLGDATARGFRVVTGFEEDGSRKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFVPNAVRKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL R P P I+ + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPAFAISDRVPEYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAV 323 >gi|52424460|ref|YP_087597.1| thymidylate synthase [Mannheimia succiniciproducens MBEL55E] gi|62901273|sp|Q65VJ8|TYSY_MANSM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|52306512|gb|AAU37012.1| ThyA protein [Mannheimia succiniciproducens MBEL55E] Length = 283 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G + RTG + + +D++ FP++TT+K +WK+ + E Sbjct: 1 MRQYLDLCQRIVNEGCWIENKRTGKRCLTVINADLTYDVANNRFPIITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 L ++RG N + + G WD A+++ ++G +YGVQ R+W +G Sbjct: 61 FLGYIRGYDNAADFRKLGAKTWDANANENQVWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV +L R I++ N D L PC F + L YQR Sbjct: 121 ETVDQLRKIVNNLSRGIDDRGEILTFLNPGEFDLGCLRPCMYNHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP+I L +DF + Y+ H I SV Sbjct: 241 PSPKLEINPDIKTLEDLETWVTMDDFNVVGYQCHEPIKYPFSV 283 >gi|330815938|ref|YP_004359643.1| Thymidylate synthase [Burkholderia gladioli BSR3] gi|327368331|gb|AEA59687.1| Thymidylate synthase [Burkholderia gladioli BSR3] Length = 323 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 152/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRSILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+ + +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAAEFRALGCKVWDANANDNAAWLANPYRTGLDDLGDVYGVQWRRWPGYKVLD 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 AQATGQLEDALARGYRIVTRFEEEGVQQVLLYKAIDQLRDCLDTIMRDPSSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 +D++ALP CH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PVKLDEIALPACHLLYQFLPNPVTREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N E + QL R P P++ I + D L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLEMLNQQLEREPYESPRLAIADRVPDYAKTGVYEPEWLER 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y HA + A ++V Sbjct: 301 IEPADFSLEGYRHHAPLTAPMAV 323 >gi|301768887|ref|XP_002919869.1| PREDICTED: LOW QUALITY PROTEIN: thymidylate synthase-like [Ailuropoda melanoleuca] Length = 358 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 97/283 (34%), Positives = 148/283 (52%), Gaps = 24/283 (8%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 Q L ++H++ + + TG F Q + L + FPLLTT +V K V+ ELLWF Sbjct: 53 QCLGQIQHILHXRFQKDECTGTSMLWVF-MQAHYSLREEFPLLTTTRVFXKGVLEELLWF 111 Query: 63 LRGDSNVSY-LHRHGVSIWDEWADKD------------GELGPIYGVQWRS----WPDYD 105 ++G +N + L GV IWD A +D G+LGP YG QWR + D D Sbjct: 112 IKGSTNAKHSLSSKGVKIWDANASRDFLDSLGFSSGVEGDLGPGYGSQWRHLGAEYKDKD 171 Query: 106 ----GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 G+ +DQ+ + ++ P RR I+ WN + +AL PCH L G+ SC Sbjct: 172 AGDSGHGVDQLQKVFGTIETKPEDRRIILCGWNPKALPLLALLPCHALCXEL--RGEWSC 229 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLY+R+GD+ L +PFN+A + L ++A + G + G + TL D +Y NH E +QL Sbjct: 230 QLYRRAGDMGLAVPFNLACRTPLAYVIAHITGLKPGNLVRTLXDTRIYLNHVEPLKMQLQ 289 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R P++ I + + F+ EDF ++ Y PH I +++V Sbjct: 290 QETRPFPKLKILQKVEMIHDFKAEDFQIKGYNPHPTIKMEMAV 332 >gi|163815127|ref|ZP_02206508.1| hypothetical protein COPEUT_01283 [Coprococcus eutactus ATCC 27759] gi|158449536|gb|EDP26531.1| hypothetical protein COPEUT_01283 [Coprococcus eutactus ATCC 27759] Length = 294 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 12/271 (4%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ +I+ G D + T FG R+DLSK FP +T +K + KS Sbjct: 26 FINMCSDIIENGYSTEGEKVRPKWEDGSYAYTIKKFGVVNRYDLSKEFPAITLRKTYIKS 85 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 + ELLW + SN +H IWD WAD++G +G YG Q Y ++DQ+ Sbjct: 86 AIDELLWIWQKKSN--NVHDLKSHIWDSWADENGSIGKAYGYQLGVKHQYKEGMMDQVDR 143 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 ++ L+ +PYSRR + + + + +M L PC F V +L+ L QRS DV Sbjct: 144 LLYDLKNNPYSRRMMTNIYVHQDLHEMNLYPCAYSMTFNVTGDRLNAILNQRSQDVLTAN 203 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 +N+ Y+ L M+A V GF+ GE +H + D H+Y+ H + R P++I+NP Sbjct: 204 NWNVVQYAALVYMIAQVTGFKPGELVHVIADAHIYDRHIPLVKELIKRPTYPAPKVILNP 263 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 ++ D F +DFT+ Y I V++ Sbjct: 264 DVKDFYDFTVDDFTIEDYVTGPQIKNIPVAI 294 >gi|322515113|ref|ZP_08068119.1| thymidylate synthase [Actinobacillus ureae ATCC 25976] gi|322118891|gb|EFX91076.1| thymidylate synthase [Actinobacillus ureae ATCC 25976] Length = 283 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + +D++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYDVANGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+++ ++G +YG R++P DG Sbjct: 61 LLGYIRGYDNAADFRNLGTKSWDVNANQNAAWLANPYRKGEDDMGLVYGAVGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID + IV L+ +R I + ++ + L PC F + +G L QR Sbjct: 121 GSIDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITEHKAGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + YE H +I +V Sbjct: 241 GAPKLWINPEIKSLEDLETWVTLDDFKVEDYEYHPSIQYPFAV 283 >gi|296158288|ref|ZP_06841120.1| thymidylate synthase [Burkholderia sp. Ch1-1] gi|295891624|gb|EFG71410.1| thymidylate synthase [Burkholderia sp. Ch1-1] Length = 323 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 101/323 (31%), Positives = 153/323 (47%), Gaps = 59/323 (18%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T S G +RFDL +GFP +TTKK+ +KS V EL+ Sbjct: 1 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLN 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ +P RR + AWN Sbjct: 121 ADASAQLVDATARGFRVVTEFEEDGSRKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180 Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A++D++ALP CH L+QF ++S LY RS DV LG PFN+ + L ++ + Sbjct: 181 PAVLDQIALPACHLLYQFVPNAVRKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241 G+ F + +GD H+Y N + QL+R P P I+ + + L Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPAFAISDRVPEYAKTGVYEPEWLEK 300 Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DF+L Y H + A ++V Sbjct: 301 IEPADFSLVGYRHHDPLTAPMAV 323 >gi|2293408|gb|AAC26324.1| thymidylate synthase [Bacillus subtilis] Length = 231 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 92/232 (39%), Positives = 139/232 (59%), Gaps = 3/232 (1%) Query: 35 RFDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPI 93 RFD S+ P+LTTKKV WK+ + ELLW + ++V+ L++ GV IWD+W +DG +G Sbjct: 1 RFDNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHA 59 Query: 94 YGVQWRSW-PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 YG Q + +G +DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+ Sbjct: 60 YGFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQW 119 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 YV GKL ++ RS D+ LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H Sbjct: 120 YVKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRH 179 Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +Q+ R P++ INP + D F +DF L +Y+ +L +V+V Sbjct: 180 IDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 231 >gi|156973290|ref|YP_001444197.1| thymidylate synthase [Vibrio harveyi ATCC BAA-1116] gi|166231743|sp|A7MXJ9|TYSY_VIBHB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|156524884|gb|ABU69970.1| hypothetical protein VIBHAR_00971 [Vibrio harveyi ATCC BAA-1116] Length = 283 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ RSW DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRSWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L D R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRDVDDRGEILNFYNPGEFHIGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 INP I L +DF + YE H I SV Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|89093745|ref|ZP_01166691.1| thymidylate synthase [Oceanospirillum sp. MED92] gi|89081875|gb|EAR61101.1| thymidylate synthase [Oceanospirillum sp. MED92] Length = 283 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 132/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G +RTG + + +D++KG FP++TT+K +KS + E Sbjct: 1 MRQYLDLCQRIIDEGVWVENERTGKRCLTVINADLTYDVAKGEFPMVTTRKTFYKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L +LRG N + + G WD A+ + + G IYG R++P DG Sbjct: 61 MLGYLRGYDNAADFRKIGTKTWDANANDNAAWLNNPYRKGEDDCGFIYGKVGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID + IV L R I + ++ L PC F + L QR Sbjct: 121 GSIDLLRKIVDDLSQGIDDRGEIYTFYHPGAFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ L ++A + G + G+ H + + H+Y + E D+QL+R P Sbjct: 181 SCDVPLGLTFNMIQVYFLLAIMAQITGKKPGKAYHRIVNAHIYEDQVELMRDVQLTREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP INP+I L +DF + YE H AI SV Sbjct: 241 PLPTFKINPDIKTLEDLETWVTVDDFEVEGYEHHEAIQYPFSV 283 >gi|269959596|ref|ZP_06173977.1| thymidylate synthase [Vibrio harveyi 1DA3] gi|269835654|gb|EEZ89732.1| thymidylate synthase [Vibrio harveyi 1DA3] Length = 283 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ RSW DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRSWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 INP I L +DF + YE H I SV Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|160892516|ref|ZP_02073306.1| hypothetical protein CLOL250_00045 [Clostridium sp. L2-50] gi|156865557|gb|EDO58988.1| hypothetical protein CLOL250_00045 [Clostridium sp. L2-50] Length = 276 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 12/271 (4%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R +I+ G D T T FG R+DLSK FP +T +K + KS Sbjct: 8 FIEMCRSIIENGYSTEGEKVRPKWEDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTYIKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 + E+LW + SN +H IWD WAD+DG +G YG Q Y + DQ+ Sbjct: 68 AIDEILWIWQKKSN--NVHDLKSHIWDSWADEDGSIGKAYGYQMGVKHQYKEGMFDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 ++ L+ +PYSRR + + + + +M L PC F V +L+ L QRS DV Sbjct: 126 LIYDLKHNPYSRRMMTNMYVHEDLHEMNLYPCAYGMTFNVTGDRLNAILNQRSQDVLAAN 185 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 +N+ Y+ L M+A V GF+ GE +H + D H+Y+ H +SR P+ +NP Sbjct: 186 NWNVVQYAALVYMIAQVTGFKPGELVHVIADAHIYDRHIPIVKELISRETYPAPKFTMNP 245 Query: 235 NIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 ++ D F +DFT+ Y+ + +++ Sbjct: 246 DVKDFYQFTLDDFTIEDYQTGPQVKNIPIAI 276 >gi|209694165|ref|YP_002262093.1| thymidylate synthase [Aliivibrio salmonicida LFI1238] gi|208008116|emb|CAQ78258.1| thymidylate synthase [Aliivibrio salmonicida LFI1238] Length = 285 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 86/282 (30%), Positives = 129/282 (45%), Gaps = 19/282 (6%) Query: 2 HQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL + ++ G+ +RTG + + +D++ G FPL+TT+K WKS V E+ Sbjct: 4 KQYLDLCQRIVSEGTWIENERTGKRCLTVINADLTYDVANGEFPLVTTRKSFWKSAVAEM 63 Query: 60 LWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDGN 107 + ++RG N + G WD + ++G +YGVQ RSW +G Sbjct: 64 IGYIRGYDNAEDFRQIGTKTWDANANLNNAWLNNPHRKGEDDMGRVYGVQGRSWAKPNGE 123 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQ+ I+ L R I++ +N D L PC F + L QRS Sbjct: 124 FVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDIGCLRPCMYSHHFSLLGDTLYLNSTQRS 183 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPRT 226 DV LG+ FN+ L ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 184 CDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNGHIYEDQLELMKDVQLKREPLK 243 Query: 227 LPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P INP I L +DF + YE H I SV Sbjct: 244 APVFKINPKITSLEDLETWVTMDDFEVIGYESHEVIKYPFSV 285 >gi|331086111|ref|ZP_08335194.1| thymidylate synthase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407034|gb|EGG86539.1| thymidylate synthase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 282 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 88/279 (31%), Positives = 136/279 (48%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++++ R +I G+ D + T FG R+DLSK FP LT ++ Sbjct: 6 KVFIEMCRDIIDNGTSTEGEKVRPKWEDGSYAYTIKKFGVVNRYDLSKEFPALTLRRTGI 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS V E+LW + SN +H IWD WAD+DG +G YG Q + Y ++DQ+ Sbjct: 66 KSCVDEMLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMQVKHQYREGMMDQV 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166 ++ L+ +PYSRR + + + + +M L PC F V + L+ L QR Sbjct: 124 DRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKREDSEKLVLNGILNQR 183 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV +N+ Y++L MLA V Q GEF+H + D H+Y+ H + + R P Sbjct: 184 SQDVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHIPLIEELIKREPLP 243 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P+ +NP+I D +F ED L Y+ + ++V Sbjct: 244 APKFWLNPDIKDFYAFTPEDVRLDDYQTGPQVKNIPIAV 282 >gi|109900136|ref|YP_663391.1| thymidylate synthase [Pseudoalteromonas atlantica T6c] gi|123170603|sp|Q15P51|TYSY_PSEA6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|109702417|gb|ABG42337.1| thymidylate synthase [Pseudoalteromonas atlantica T6c] Length = 283 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G + RTG + + +++ G FPL+TT+K +KS + E Sbjct: 1 MKQYLDLCQRIVDDGKWVNNERTGKKCLTVINADLTYNVGNGEFPLVTTRKSFYKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 ++ ++RG N + + G S WD A+++ + G IYG R++P DG Sbjct: 61 MIGYIRGYDNAADFRKIGTSTWDANANQNQAWLDNPHRKGEDDCGLIYGKIGRNFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 ID ++ I+ L+ R I + ++ L PC F + + L QR Sbjct: 121 GSIDLLAKIIYDLKNGIDDRGEIFTFYHPGAFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ L ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGKKAGMAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 +P++IINP+I L +DF++ Y H AI SV Sbjct: 241 GMPKLIINPDIKSLEDLETWVTMDDFSIEGYAHHPAIKYPFSV 283 >gi|166240844|ref|ZP_02240716.1| Thymidylate synthase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 182 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 97/179 (54%), Positives = 125/179 (69%) Query: 86 KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 + G+LG +YG QWR+W +G IDQ+ I+ +++ +P SRR IVSAWN I M LPP Sbjct: 4 EFGDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVSAWNPEDIPSMVLPP 63 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 CH LFQFYV G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A G + GEFIHTLGD Sbjct: 64 CHTLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHECGIEAGEFIHTLGD 123 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H+Y+NH +Q LQLSR P+ LP + INP + + D L Y+PH +I A V+V Sbjct: 124 AHVYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEGYDPHPSIKAPVAV 182 >gi|154484777|ref|ZP_02027225.1| hypothetical protein EUBVEN_02495 [Eubacterium ventriosum ATCC 27560] gi|149734625|gb|EDM50542.1| hypothetical protein EUBVEN_02495 [Eubacterium ventriosum ATCC 27560] Length = 282 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 86/275 (31%), Positives = 130/275 (47%), Gaps = 18/275 (6%) Query: 6 DLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 D+ R+++ G+D D + T FG R+DL K FP +T +K +K+ + Sbjct: 10 DMCRNILDNGTDTKGEKVRPKWDDGSFAYTIKKFGVVNRYDLKKEFPAITLRKTGFKNCL 69 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 ELLW + SN +H IWD WAD+ G +G YG Q Y +DQ+ ++ Sbjct: 70 DELLWIWQKKSN--NVHDLNSHIWDAWADETGSIGKAYGYQLGIKHHYKEGDMDQVDRVL 127 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGDV 170 L+ +PYSRR + + +N + +M L PC F V + L+ L QRS DV Sbjct: 128 YDLKHNPYSRRIMTNIYNHEDLHEMNLYPCAYSMTFNVTKNEETGNLVLNGILNQRSQDV 187 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 +N+ Y+ L M A V + GEFIH + D H+Y+ H + ++R P++ Sbjct: 188 LTANNWNVCQYAALIHMFAQVNDMEVGEFIHVIADAHIYDKHVPLIEELITREQHPAPKL 247 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 INP I + F +D L Y I V+V Sbjct: 248 WINPEIKNFYDFTVDDLKLEDYVTGPQIKNIPVAV 282 >gi|291545325|emb|CBL18433.1| thymidylate synthase [Ruminococcus sp. SR1/5] Length = 282 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 88/278 (31%), Positives = 134/278 (48%), Gaps = 20/278 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ + VI+ G+ D T T FG R+DL K FP LT +K KS Sbjct: 8 FIDMCKDVIENGTSTEGEKVRPVWEDGTPAYTIKRFGVVNRYDLRKEFPALTLRKTALKS 67 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + +N+ LH IWD WAD++G +G YG Q Y ++DQ+ Sbjct: 68 AMDEILWIWQQKSNNIHDLH---SHIWDSWADENGSIGKAYGYQLGVKHQYKEGMMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 125 RVLFDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLVLNAVLNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ YSLL MM+A + GE +H + D H+Y+ H +SR P Sbjct: 185 QDILAANNWNVCQYSLLLMMIAQACDMEAGELVHVIADCHIYDRHIPVIKELISRKPYPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P + +NP I D F +D + +YE I ++V Sbjct: 245 PTVKLNPEIKDFYKFTTDDLIVENYETWPQIKNIPIAV 282 >gi|240949099|ref|ZP_04753447.1| thymidylate synthase [Actinobacillus minor NM305] gi|240296494|gb|EER47126.1| thymidylate synthase [Actinobacillus minor NM305] Length = 283 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G + RTG + + +D+ KG FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVSNERTGKRCLTVINADLTYDVEKGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG S+ + G WD A+++ ++G +YG R++P +G Sbjct: 61 LLGYIRGYSSAADFRTLGTKSWDANANENSAWLANPHRKGEDDMGLVYGAIGRNFPKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L +R I + ++ + L PC F + +GKL QR Sbjct: 121 GSVDLLRQIVDDLSRGIDNRGEIYTFYHPGAFELGCLRPCLHSHHFSLLDGKLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHEAGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 + P++IINP I L +DF + YE H +I SV Sbjct: 241 SAPKLIINPKIKSLEDLETWVTLDDFRVEGYEYHPSIQYPFSV 283 >gi|163803536|ref|ZP_02197405.1| thymidylate synthase [Vibrio sp. AND4] gi|159172671|gb|EDP57524.1| thymidylate synthase [Vibrio sp. AND4] Length = 283 Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G+ +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLSYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEEFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 INP I L +DF + YE H I SV Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283 >gi|94501822|ref|ZP_01308334.1| thymidylate synthase [Oceanobacter sp. RED65] gi|94426043|gb|EAT11039.1| thymidylate synthase [Oceanobacter sp. RED65] Length = 283 Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 126/283 (44%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + +I G + RTG + + + + FPL+TT+K +K+ + E Sbjct: 1 MRQYLDLCQRIIDEGVWINNERTGKRCLTVVNADLEYRVDRNEFPLVTTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDG 106 L ++RG + + G WD + ++G +YGVQ R W DG Sbjct: 61 FLGYIRGYDSAADFRNIGCKTWDANANLNDAWLDNPHRKGEDDMGRVYGVQGRRWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV +L R I+S +N L PC F + L YQR Sbjct: 121 GHIDQLRKIVDNLSKGIDDRGEIMSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNQVQVYFFLAIMAQITGHKPGVAYHKIVNAHIYEDQLELMRDVQLKRKPY 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++IINP+I L +DF + Y+ H I SV Sbjct: 241 PSPKLIINPDIKSLEDLETWVTVDDFQVEGYQYHDPIAYPFSV 283 >gi|167464449|ref|ZP_02329538.1| Thymidylate synthase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 230 Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 97/179 (54%), Positives = 125/179 (69%) Query: 86 KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 + G+LG +YG QWR+W +G IDQ+ I+ +++ +P SRR IVSAWN I M LPP Sbjct: 52 EFGDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVSAWNPEDIPSMVLPP 111 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 CH LFQFYV G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A G + GEFIHTLGD Sbjct: 112 CHTLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHECGIEAGEFIHTLGD 171 Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H+Y+NH +Q LQLSR P+ LP + INP + + D L Y+PH +I A V+V Sbjct: 172 AHVYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEGYDPHPSIKAPVAV 230 >gi|114564106|ref|YP_751620.1| thymidylate synthase [Shewanella frigidimarina NCIMB 400] gi|122299026|sp|Q07YY3|TYSY_SHEFN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|114335399|gb|ABI72781.1| thymidylate synthase [Shewanella frigidimarina NCIMB 400] Length = 283 Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G + RT + + +D+ + FPL+TT+K WKS + E Sbjct: 1 MKQYLDLCKRIVDEGEWVNNARTNKKCLTVINADLVYDVGNNQFPLVTTRKSFWKSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L +LRG N + G WD A+++ ++G IYG R++P DG Sbjct: 61 ILGYLRGYQNAADFRALGTKTWDANANENQAWLDNPNRKGPDDMGLIYGALGRAFPKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L +R I++ ++ D L PC F + L QR Sbjct: 121 GHVDLLQQIVDDLSNGIDNRGEILTFYHPGAFDLGCLRPCMYEHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSRSPR 225 S DV LG+ FN+ +L ++A + G + G+ H + + H+Y + E D+QL+R P Sbjct: 181 SCDVPLGLNFNMVQVYVLLALMAQITGHKPGKAYHKIVNAHIYEDQLEPMRDVQLAREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++IINP I L +DF++ Y+ H AI +V Sbjct: 241 ASPKLIINPKIKTLKDIETWVTLDDFSVEDYQHHDAIKYPFAV 283 >gi|223041713|ref|ZP_03611907.1| thymidylate synthase [Actinobacillus minor 202] gi|223017457|gb|EEF15874.1| thymidylate synthase [Actinobacillus minor 202] Length = 283 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + +D+ KG FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVANERTGKRCLTVINADLTYDVEKGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG S+ + G WD A+++ ++G +YG R++P +G Sbjct: 61 LLGYIRGYSSAADFRALGTKSWDANANENSAWLANPHRKGEDDMGLVYGAIGRNYPKPNG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L +R I + ++ + L PC F + +GKL QR Sbjct: 121 GSVDLLRQIVDDLSRGIDNRGEIYTFYHPGAFELGCLRPCLHSHHFSLLDGKLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHEAGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 + P++IINP I L +DF + YE H +I SV Sbjct: 241 SAPKLIINPEIKSLEDLETWVTLDDFRVEGYEYHPSIQYPFSV 283 >gi|260771141|ref|ZP_05880068.1| thymidylate synthase [Vibrio furnissii CIP 102972] gi|260613738|gb|EEX38930.1| thymidylate synthase [Vibrio furnissii CIP 102972] gi|315179253|gb|ADT86167.1| thymidylate synthase [Vibrio furnissii NCTC 11218] Length = 283 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDEGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRALGTKTWDANANLNDAWLNNPHRQGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHVDQLKKIVDDLTRGVDDRGEILNFYNPGEFHLGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLALMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INPNI L +DF + YE H I SV Sbjct: 241 AAPQFHINPNIKSLHDLETWVTLDDFDVTGYEFHEPIQYPFSV 283 >gi|190149384|ref|YP_001967909.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307244923|ref|ZP_07527020.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253877|ref|ZP_07535729.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258331|ref|ZP_07540072.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260572|ref|ZP_07542264.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262702|ref|ZP_07544330.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914515|gb|ACE60767.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306854088|gb|EFM86296.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863081|gb|EFM95023.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867515|gb|EFM99362.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869649|gb|EFN01434.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871957|gb|EFN03673.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 283 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + ++++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P DG Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQNSAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ + L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + G + G+ H + + H+Y + FE D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + SYE H AI SV Sbjct: 241 ASPKLWINPAIKSLEDLETWVTLDDFKVESYEYHPAIQYPFSV 283 >gi|313905071|ref|ZP_07838441.1| thymidylate synthase [Eubacterium cellulosolvens 6] gi|313470141|gb|EFR65473.1| thymidylate synthase [Eubacterium cellulosolvens 6] Length = 282 Score = 254 bits (649), Expect = 9e-66, Method: Composition-based stats. Identities = 87/276 (31%), Positives = 129/276 (46%), Gaps = 20/276 (7%) Query: 6 DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 D+ R +I G D T T FG R+DL K FP +T ++ KS Sbjct: 10 DMCRDIIDHGCSTEGEKVRPHWEDGTSAYTIKKFGVVNRYDLRKEFPAITLRRTAIKSCT 69 Query: 57 HELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 ELLW + +NV L IWD WAD++G +G YG Q + +DQ+ + Sbjct: 70 DELLWIWQKKSNNVKDLK---SHIWDAWADENGTIGKAYGYQLGVKYKFPEGEMDQVDRL 126 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGD 169 + L+ +PYSRR + S +N + +MAL PC F V L+ L QRS D Sbjct: 127 IYDLKNNPYSRRILTSIYNFQDLHEMALYPCAYSMTFNVTKEPGSEKLVLNSILNQRSQD 186 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + +N+ Y++LTMM+A G GEF+H + D H+Y+ H + ++R P+ Sbjct: 187 ILTANNWNVCQYAILTMMIAQTCGMIPGEFMHVIADAHIYDRHIPLVEELITREQYPAPK 246 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 + +NP I D F +D + Y I V+V Sbjct: 247 VHLNPEITDFYQFTPDDVIVEDYVTGPQIKNIPVAV 282 >gi|165975571|ref|YP_001651164.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303251939|ref|ZP_07338110.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247098|ref|ZP_07529150.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|165875672|gb|ABY68720.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649369|gb|EFL79554.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856347|gb|EFM88498.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 283 Score = 254 bits (649), Expect = 9e-66, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + ++++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R++P DG Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQNLAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L+ +R I + ++ + L PC F + +G L QR Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + G + G+ H + + H+Y + FE D+QL R P Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P++ INP I L +DF + SYE H AI SV Sbjct: 241 ASPKLWINPAIKSLEDLETWVTLDDFKVESYEYHPAIQYPFSV 283 >gi|90407304|ref|ZP_01215490.1| putative thymidylate synthetase (thyA) [Psychromonas sp. CNPT3] gi|90311587|gb|EAS39686.1| putative thymidylate synthetase (thyA) [Psychromonas sp. CNPT3] Length = 283 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G + RT + + +D+ FP++TT+K ++S + E Sbjct: 1 MKQYLDLCKRIVEQGHWIENARTAKRCLTVINADLEYDVGNNKFPMITTRKSFYRSAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 L ++RG N + G WD A+ + ++G +YG+Q RSW ++DG Sbjct: 61 FLGYIRGYDNAADFRALGTKTWDANANLNKAWLNNPVRKGEDDMGRVYGIQARSWKNHDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ +V +L+ R I++ +N D L PC F + L YQR Sbjct: 121 SHLDQLKKVVDNLKQGIDDRAEIITFYNPGEFDLGCLRPCMHTHTFSLIGDTLHLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN ++A + G + G H + + H+Y + D+QL+R P Sbjct: 181 SCDVPLGLNFNQVQVFTFLALMAQITGKKAGMAYHKIVNAHIYEDQLALMRDVQLTRQPF 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 P++IINP I L +DF++ Y+ H I SV Sbjct: 241 ASPKLIINPKIQSLEDLETWVSMDDFSIEDYQHHDPIKYPFSV 283 >gi|284008551|emb|CBA75098.1| thymidylate synthase [Arsenophonus nasoniae] Length = 283 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 90/283 (31%), Positives = 142/283 (50%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + +I G + RTGV + + +D++ FPL+TT+K +K+ + E Sbjct: 1 MKQYLDLCQRIIDEGQWIENKRTGVRCLTIINADLEYDVANNQFPLITTRKSFYKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG S+ + G + W+ A+++ ++G +YGVQ RSW DG Sbjct: 61 LLGYLRGYSSAAQFRDIGCNTWNANANENQAWLNNPNRKGEDDMGRVYGVQGRSWQRPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ ++ +L R I++ +N + L PC F + G L YQR Sbjct: 121 TYLDQLQKVISNLSVGIDDRAEIITFYNPGEFELGCLRPCMHTHTFSLLAGTLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + G + G+ H + + H+Y N D+QL R+P Sbjct: 181 SCDVPLGLNFNQIQCFVLLALIAQITGHKPGKVYHKIVNAHIYENQLSIMRDIQLKRAPY 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 +LPQ+ INP+I L DF + Y+ H AI +V Sbjct: 241 SLPQLQINPDIKTLKDIETWVSSHDFQVIGYQYHDAIKYPFTV 283 >gi|167745365|ref|ZP_02417492.1| hypothetical protein ANACAC_00056 [Anaerostipes caccae DSM 14662] gi|317473091|ref|ZP_07932390.1| thymidylate synthase [Anaerostipes sp. 3_2_56FAA] gi|167655086|gb|EDR99215.1| hypothetical protein ANACAC_00056 [Anaerostipes caccae DSM 14662] gi|316899429|gb|EFV21444.1| thymidylate synthase [Anaerostipes sp. 3_2_56FAA] Length = 282 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 87/278 (31%), Positives = 137/278 (49%), Gaps = 20/278 (7%) Query: 4 YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R +++ G+ D T T FG R+DLSK FP LT +K KS Sbjct: 8 FINMCRDILENGTSTEGEKVRPKWPDGTPAYTIKQFGVVNRYDLSKEFPALTLRKTFVKS 67 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 V ELLW + +N+ L +WDEWAD+DG +G YG Q R Y ++DQ+ Sbjct: 68 AVDELLWIWQRKSNNIHDLK---SHVWDEWADEDGSIGKAYGYQMRVKHQYAEGMMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V L+ L QRS Sbjct: 125 RVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKPGHEKLVLNGILNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ YS+L MLA V G + GEF+H + D H+Y+ H + + R Sbjct: 185 QDILAANNWNVVQYSVLLYMLAQVCGMEPGEFVHVIADAHIYDRHIPIIEELIKRPVYDA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P+ +NP++ D F +DF + Y+ I +++ Sbjct: 245 PKFSMNPDVKDFYEFTLDDFKIEDYKAGEQIKDIPIAI 282 >gi|153810935|ref|ZP_01963603.1| hypothetical protein RUMOBE_01325 [Ruminococcus obeum ATCC 29174] gi|149832823|gb|EDM87906.1| hypothetical protein RUMOBE_01325 [Ruminococcus obeum ATCC 29174] Length = 282 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 85/278 (30%), Positives = 136/278 (48%), Gaps = 20/278 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R VI+ G+ D T T FG R+DL K FP LT ++ KS Sbjct: 8 FINMCRDVIENGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLRKEFPALTLRRTALKS 67 Query: 55 VVHELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + +N+ LH IWD WAD++G +G YG Q Y ++DQ+ Sbjct: 68 AMDEILWIWQKKSNNIKDLH---SHIWDSWADENGSIGKAYGYQLGVKHQYKEGMMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 125 RVLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLTLNAILNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ YS+L MM+A V + GE +H + D H+Y+ H +SR+P Sbjct: 185 QDILAANNWNVCQYSILLMMIAQVCDMEAGELVHVIADCHIYDRHVPVIKELISRTPYPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P + +NP I D F +D + +Y+ I +++ Sbjct: 245 PTVKLNPEIRDFYEFTTDDLIVENYQTWPQIKNIPIAI 282 >gi|332652454|ref|ZP_08418199.1| thymidylate synthase [Ruminococcaceae bacterium D16] gi|332517600|gb|EGJ47203.1| thymidylate synthase [Ruminococcaceae bacterium D16] Length = 276 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 86/273 (31%), Positives = 134/273 (49%), Gaps = 16/273 (5%) Query: 4 YLDLLRHVIKFGSDRRDR---------TGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++ + ++ G DR T T FG R+DL K FP++T +K KS Sbjct: 8 FIQTCQDILSKGVWDTDRPVRPRWEDGTPAHTIKLFGVVNRYDLRKEFPIITVRKQFLKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 V ELLW + SN +H+ IWD WAD++G +G YG Q Y +DQ+ Sbjct: 68 AVDELLWIWQKKSN--DVHQLSSHIWDAWADENGTIGKAYGYQLGVKHHYPQGDMDQVDK 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 ++ L+ DP SRR + + +N + +MAL PC F V L+ L QRS D+ Sbjct: 126 VLWDLKHDPGSRRILTNLYNHHDLSEMALYPCAYSMTFNVSGNTLNGILNQRSQDMLTAN 185 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 +N+ Y++L M A V G + GE +H + D H+Y+ H + ++R P P+ I++ Sbjct: 186 GWNVMQYAVLLHMFAQVSGLEAGELVHVIADAHIYDRHVPIVEEIIARQPYDAPKFIMDK 245 Query: 235 NIVDLLSFRYEDFTLRSYEPHA---AILAKVSV 264 ++ D +F + F L Y+ H I V+V Sbjct: 246 SVTDFYAFTKDSFRLEGYQAHPLEEKI--PVAV 276 >gi|311977889|ref|YP_003987009.1| bifunctional dihydrofolate reductase-thymidylate synthase [Acanthamoeba polyphaga mimivirus] gi|82000169|sp|Q5UQG3|DRTS_MIMIV RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|55417112|gb|AAV50762.1| thymidylate synthase [Acanthamoeba polyphaga mimivirus] gi|308204867|gb|ADO18668.1| bifunctional dihydrofolate reductase-thymidylate synthase [Acanthamoeba polyphaga mimivirus] Length = 563 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 166/292 (56%), Gaps = 34/292 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +QY++L++ +++ G ++ R + T+S FGYQ+++DLSKG+P+ T K+ + K++ EL+W Sbjct: 273 NQYIELVKTIMEKGIVKQTRNSI-TKSIFGYQLKYDLSKGYPIQTIKRSYPKAIFEELMW 331 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD-----------GELGPIYGVQWRSWP-------- 102 +RG ++VS L + GV +WD+ + KD G++GP YG Q R W Sbjct: 332 MIRGQTDVSILQKKGVHVWDKNSSKDFLSKYNLPYEEGDIGPGYGFQMRYWGAEYTDCKT 391 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------- 155 Y G IDQ++ ++S++ +P+ RR +++ WN + +DKMAL PCH + F VD Sbjct: 392 SYQGQGIDQLNKCIESIQNNPHDRRIMINLWNCSDLDKMALAPCHFCYMFGVDLYEVPTT 451 Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 G+L+C L QRS DV LG +N + +LLT ++A+ G +H++ D H+Y +H Sbjct: 452 SGKKGRLNCHLVQRSWDVLLG--WNTTTAALLTYLIANHCDLDPGILVHSISDAHIYQSH 509 Query: 213 FE--QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 + L R R P ++I + + ++D + +Y P +I A++ Sbjct: 510 IDSGAISQLLQRKCRKFPNLVIRNKKEKIDDYEFDDLIIENYYPCPSISAEM 561 >gi|323497789|ref|ZP_08102803.1| thymidylate synthase [Vibrio sinaloensis DSM 21326] gi|323317136|gb|EGA70133.1| thymidylate synthase [Vibrio sinaloensis DSM 21326] Length = 283 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G+ H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 INPNI L +DF + Y H I SV Sbjct: 241 DAATFHINPNIKSLEDLETWVTLDDFWVEGYAHHDPIQYPFSV 283 >gi|254226521|ref|ZP_04920104.1| thymidylate synthase [Vibrio cholerae V51] gi|262190229|ref|ZP_06048504.1| thymidylate synthase [Vibrio cholerae CT 5369-93] gi|125620925|gb|EAZ49276.1| thymidylate synthase [Vibrio cholerae V51] gi|262033898|gb|EEY52363.1| thymidylate synthase [Vibrio cholerae CT 5369-93] Length = 283 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|260775159|ref|ZP_05884057.1| thymidylate synthase [Vibrio coralliilyticus ATCC BAA-450] gi|260608860|gb|EEX35022.1| thymidylate synthase [Vibrio coralliilyticus ATCC BAA-450] Length = 283 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58 M QYLDL + +++ G +RTG + + +D+ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVEQGEWIENERTGKRCLTVINADLTYDVGHNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDSAEDFRKLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 P+ INP+I L +DF + YE H I SV Sbjct: 241 ASPRFHINPDIKSLEDLETWVTLDDFWVEGYEYHDPIQYPFSV 283 >gi|253579644|ref|ZP_04856913.1| thymidylate synthase [Ruminococcus sp. 5_1_39B_FAA] gi|251849145|gb|EES77106.1| thymidylate synthase [Ruminococcus sp. 5_1_39BFAA] Length = 282 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 18/277 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++ + + +++ G+ D T T FG R+DL K FP +T ++ KS Sbjct: 8 FIKMCQDILENGTSTEGEKVRPVWEDGTPAYTIKKFGVVNRYDLRKEFPAMTLRRTALKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 + E+LW + SN +H IWD WAD+ G +G YG Q Y ++DQ+ Sbjct: 68 AMDEILWIWQKKSN--NIHDLHSHIWDSWADESGSIGKAYGYQLGVKHQYKEGMMDQVDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSG 168 ++ L+ +P+SRR + + + + +M L PC F V D L+ L QRS Sbjct: 126 VIYDLKNNPFSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTQTPGNDKLTLNAILNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+ +N+ Y+LL MM+A V + GE +H + D H+Y+ H + R P P Sbjct: 186 DILAANNWNVCQYALLLMMVAQVCDMEAGELLHVVADCHIYDRHIPLIKELIQRKPYPAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 + +NP + D F +D + +YE I ++V Sbjct: 246 VVKLNPEVKDFYQFTTDDLIVENYETWPQIKNIPIAV 282 >gi|121730081|ref|ZP_01682486.1| thymidylate synthase [Vibrio cholerae V52] gi|147673512|ref|YP_001216170.1| thymidylate synthase [Vibrio cholerae O395] gi|153216952|ref|ZP_01950716.1| thymidylate synthase [Vibrio cholerae 1587] gi|153826528|ref|ZP_01979195.1| thymidylate synthase [Vibrio cholerae MZO-2] gi|262169974|ref|ZP_06037664.1| thymidylate synthase [Vibrio cholerae RC27] gi|172047693|sp|A5F8Y6|TYSY_VIBC3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|3201565|emb|CAA07073.1| thymidylate synthetase [Vibrio cholerae] gi|121628168|gb|EAX60695.1| thymidylate synthase [Vibrio cholerae V52] gi|124114017|gb|EAY32837.1| thymidylate synthase [Vibrio cholerae 1587] gi|146315395|gb|ABQ19934.1| thymidylate synthase [Vibrio cholerae O395] gi|149739708|gb|EDM53915.1| thymidylate synthase [Vibrio cholerae MZO-2] gi|227012500|gb|ACP08710.1| thymidylate synthase [Vibrio cholerae O395] gi|262021708|gb|EEY40419.1| thymidylate synthase [Vibrio cholerae RC27] Length = 283 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|229512935|ref|ZP_04402402.1| thymidylate synthase [Vibrio cholerae TMA 21] gi|229350184|gb|EEO15137.1| thymidylate synthase [Vibrio cholerae TMA 21] Length = 283 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|153803571|ref|ZP_01958157.1| thymidylate synthase [Vibrio cholerae MZO-3] gi|124120895|gb|EAY39638.1| thymidylate synthase [Vibrio cholerae MZO-3] Length = 283 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INPN+ L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPNVKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|153829174|ref|ZP_01981841.1| thymidylate synthase [Vibrio cholerae 623-39] gi|229530480|ref|ZP_04419868.1| thymidylate synthase [Vibrio cholerae 12129(1)] gi|148875363|gb|EDL73498.1| thymidylate synthase [Vibrio cholerae 623-39] gi|229332253|gb|EEN97741.1| thymidylate synthase [Vibrio cholerae 12129(1)] Length = 283 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQVWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|229525326|ref|ZP_04414731.1| thymidylate synthase [Vibrio cholerae bv. albensis VL426] gi|229338907|gb|EEO03924.1| thymidylate synthase [Vibrio cholerae bv. albensis VL426] Length = 283 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|262163913|ref|ZP_06031652.1| thymidylate synthase [Vibrio mimicus VM223] gi|262027441|gb|EEY46107.1| thymidylate synthase [Vibrio mimicus VM223] Length = 283 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLNLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ+ INP I L +DF + Y+ H AI SV Sbjct: 241 AAPQLHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283 >gi|210616227|ref|ZP_03291007.1| hypothetical protein CLONEX_03226 [Clostridium nexile DSM 1787] gi|210149893|gb|EEA80902.1| hypothetical protein CLONEX_03226 [Clostridium nexile DSM 1787] Length = 282 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 90/280 (32%), Positives = 133/280 (47%), Gaps = 20/280 (7%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++D+ R +I G D + T F R+DLSK FP LT ++ Sbjct: 6 KVFIDMCRDIIDNGVSTEGEKVRPKWEDGSFAYTLKKFCVVNRYDLSKEFPALTLRRTGI 65 Query: 53 KSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQ 111 KS V ELLW + +NV L IWD WAD+DG +G YG Q Y ++DQ Sbjct: 66 KSCVDELLWIWQRKSNNVHDLK---PHIWDSWADEDGSIGKAYGYQMSVKHQYKEGMMDQ 122 Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQ 165 + ++ L+ +PYSRR + + + + +M L PC F V D L+ L Q Sbjct: 123 VDRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKNDSDKLVLNGILNQ 182 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DV +N+ Y++L MLA V Q GEF+H + D H+Y+ H + +SR P Sbjct: 183 RSQDVLAANNWNVCQYAVLMHMLAQVCDMQVGEFVHVIADAHIYDRHIPLVEELISREPL 242 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P +NP + + F +D L +YE + I ++V Sbjct: 243 PAPTFWLNPEVKNFYEFTPDDVRLDNYETGSQIKNIPIAV 282 >gi|15640694|ref|NP_230324.1| thymidylate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591333|ref|ZP_01678622.1| thymidylate synthase [Vibrio cholerae 2740-80] gi|153820133|ref|ZP_01972800.1| thymidylate synthase [Vibrio cholerae NCTC 8457] gi|153823743|ref|ZP_01976410.1| thymidylate synthase [Vibrio cholerae B33] gi|227080856|ref|YP_002809407.1| thymidylate synthase [Vibrio cholerae M66-2] gi|229505705|ref|ZP_04395215.1| thymidylate synthase [Vibrio cholerae BX 330286] gi|229508721|ref|ZP_04398214.1| thymidylate synthase [Vibrio cholerae B33] gi|229519529|ref|ZP_04408972.1| thymidylate synthase [Vibrio cholerae RC9] gi|229608724|ref|YP_002879372.1| thymidylate synthase [Vibrio cholerae MJ-1236] gi|254851007|ref|ZP_05240357.1| thymidylate synthase [Vibrio cholerae MO10] gi|255743866|ref|ZP_05417822.1| thymidylate synthase [Vibrio cholera CIRS 101] gi|262156085|ref|ZP_06029204.1| thymidylate synthase [Vibrio cholerae INDRE 91/1] gi|297580799|ref|ZP_06942725.1| thymidylate synthase [Vibrio cholerae RC385] gi|298500789|ref|ZP_07010592.1| thymidylate synthase [Vibrio cholerae MAK 757] gi|6686061|sp|O66108|TYSY_VIBCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790256|sp|C3LST0|TYSY_VIBCM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|3114981|emb|CAA76645.1| thymidilate synthase [Vibrio cholerae] gi|9655113|gb|AAF93840.1| thymidylate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546814|gb|EAX56979.1| thymidylate synthase [Vibrio cholerae 2740-80] gi|126509325|gb|EAZ71919.1| thymidylate synthase [Vibrio cholerae NCTC 8457] gi|126518737|gb|EAZ75960.1| thymidylate synthase [Vibrio cholerae B33] gi|227008744|gb|ACP04956.1| thymidylate synthase [Vibrio cholerae M66-2] gi|229344218|gb|EEO09193.1| thymidylate synthase [Vibrio cholerae RC9] gi|229354245|gb|EEO19175.1| thymidylate synthase [Vibrio cholerae B33] gi|229357928|gb|EEO22845.1| thymidylate synthase [Vibrio cholerae BX 330286] gi|229371379|gb|ACQ61802.1| thymidylate synthase [Vibrio cholerae MJ-1236] gi|254846712|gb|EET25126.1| thymidylate synthase [Vibrio cholerae MO10] gi|255738497|gb|EET93886.1| thymidylate synthase [Vibrio cholera CIRS 101] gi|262030121|gb|EEY48766.1| thymidylate synthase [Vibrio cholerae INDRE 91/1] gi|297535215|gb|EFH74050.1| thymidylate synthase [Vibrio cholerae RC385] gi|297540570|gb|EFH76628.1| thymidylate synthase [Vibrio cholerae MAK 757] gi|327483475|gb|AEA77882.1| Thymidylate synthase [Vibrio cholerae LMA3894-4] Length = 283 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|262172248|ref|ZP_06039926.1| thymidylate synthase [Vibrio mimicus MB-451] gi|261893324|gb|EEY39310.1| thymidylate synthase [Vibrio mimicus MB-451] Length = 283 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLNLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H AI SV Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283 >gi|229520965|ref|ZP_04410387.1| thymidylate synthase [Vibrio cholerae TM 11079-80] gi|254291915|ref|ZP_04962697.1| thymidylate synthase [Vibrio cholerae AM-19226] gi|150422201|gb|EDN14166.1| thymidylate synthase [Vibrio cholerae AM-19226] gi|229342198|gb|EEO07194.1| thymidylate synthase [Vibrio cholerae TM 11079-80] Length = 283 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|258620343|ref|ZP_05715381.1| thymidylate synthase [Vibrio mimicus VM573] gi|258587222|gb|EEW11933.1| thymidylate synthase [Vibrio mimicus VM573] Length = 283 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWTKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H AI SV Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283 >gi|296222344|ref|XP_002757146.1| PREDICTED: thymidylate synthase-like isoform 3 [Callithrix jacchus] Length = 230 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 88/192 (45%), Positives = 121/192 (63%), Gaps = 5/192 (2%) Query: 78 SIWDEWADKDGELGP----IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 I KD G ++G+Q R S DY G +DQ+ ++ +++ +P RR I+ A Sbjct: 39 HILRCGVRKDDRTGTGTLSVFGMQARYSLRDYSGQGVDQLQRVIDTIKTNPDDRRIIMCA 98 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH L QFYV NG+LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + Sbjct: 99 WNPRDLPLMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHIT 158 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + G+F+HTLGD H+Y NH E +QL R PR P++ I + + F+ EDF + Y Sbjct: 159 GLKPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFKVEGY 218 Query: 253 EPHAAILAKVSV 264 PH I +++V Sbjct: 219 NPHPTIKMEMAV 230 Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 23/38 (60%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK 40 QYL + H+++ G + DRTG GT S FG Q R+ L Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRD 69 >gi|258624715|ref|ZP_05719649.1| thymidylate synthase [Vibrio mimicus VM603] gi|258583002|gb|EEW07817.1| thymidylate synthase [Vibrio mimicus VM603] Length = 283 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H AI SV Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283 >gi|2293410|gb|AAC26325.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23] Length = 230 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 90/231 (38%), Positives = 138/231 (59%), Gaps = 3/231 (1%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIY 94 FD S+ P+LTTKKV WK+ + ELLW + ++V+ L++ GV IWD+W +DG +G Y Sbjct: 1 FDNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAY 59 Query: 95 GVQWRSW-PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 G Q + +G +DQ+ ++ L+ +P SRRHI W+ +D MAL PC Q+Y Sbjct: 60 GFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWSPDELDSMALTPCVYETQWY 119 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V GKL ++ RS D+ LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H Sbjct: 120 VKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHI 179 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +Q+ R P++ INP + D F +DF L +Y+ +L +V+V Sbjct: 180 DNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLFNYKHGDKLLFEVAV 230 >gi|262401626|ref|ZP_06078192.1| thymidylate synthase [Vibrio sp. RC586] gi|262352043|gb|EEZ01173.1| thymidylate synthase [Vibrio sp. RC586] Length = 283 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MQQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H AI SV Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283 >gi|261212215|ref|ZP_05926501.1| thymidylate synthase [Vibrio sp. RC341] gi|260838823|gb|EEX65474.1| thymidylate synthase [Vibrio sp. RC341] Length = 283 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYL+L + ++ G +RT + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GQIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLPLMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP+I L +DF + YE H AI SV Sbjct: 241 AAPQFHINPDIKTLHDLETWVTLDDFEVTGYEFHDAIQYPFSV 283 >gi|167766809|ref|ZP_02438862.1| hypothetical protein CLOSS21_01317 [Clostridium sp. SS2/1] gi|317498799|ref|ZP_07957087.1| thymidylate synthase [Lachnospiraceae bacterium 5_1_63FAA] gi|167711563|gb|EDS22142.1| hypothetical protein CLOSS21_01317 [Clostridium sp. SS2/1] gi|291560612|emb|CBL39412.1| thymidylate synthase [butyrate-producing bacterium SSC/2] gi|316893934|gb|EFV16128.1| thymidylate synthase [Lachnospiraceae bacterium 5_1_63FAA] Length = 282 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 20/278 (7%) Query: 4 YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++ + +++ G+ D T FG R+DLSK FP LT +K + KS Sbjct: 8 FISMCEDILENGTSTEGEKVRPHWPDGESAYTIKQFGVVNRYDLSKEFPALTLRKTYIKS 67 Query: 55 VVHELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + ELLW + +NV+ L IWDEWAD+DG +G YG Q Y ++DQ+ Sbjct: 68 AIDELLWIWQKKSNNVNDLK---SHIWDEWADEDGSIGKAYGYQMGVKHQYKEGMMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 125 RVIYDLKHNPYSRRIMTNIYVHQDLHEMNLYPCAYSVTFNVTKKPGHDKLTLNAILNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ Y+ L M+A V + GE +H + D H+Y+ H + R Sbjct: 185 QDILAANNWNVVQYAALVYMMAQVCDMEPGELVHVIADAHIYDRHIPIIKEMIKRETYPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P++ +NP + D F +DF + Y+ I +++ Sbjct: 245 PKVTLNPEVKDFYEFTTDDFKIEDYQAGEQIKDIPIAI 282 >gi|260771789|ref|ZP_05880707.1| thymidylate synthase [Vibrio metschnikovii CIP 69.14] gi|260613081|gb|EEX38282.1| thymidylate synthase [Vibrio metschnikovii CIP 69.14] Length = 283 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WKS V E Sbjct: 1 MKQYLDLCQRIVDQGIWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKSAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG + + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDSAADFRQLGTKTWDANANMNAAWLANPYRQGEDDMGRVYGVQGRAWTKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLTRGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLGLNFNMVQVYVFLAVMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKRHPL 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 Q INP I L +DF++ Y+ H I SV Sbjct: 241 PAAQFHINPEIRSLEDLETWVTLDDFSVTDYQHHDPIQYPFSV 283 >gi|302671643|ref|YP_003831603.1| thymidylate synthase ThyA [Butyrivibrio proteoclasticus B316] gi|302396116|gb|ADL35021.1| thymidylate synthase ThyA [Butyrivibrio proteoclasticus B316] Length = 283 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 83/265 (31%), Positives = 127/265 (47%), Gaps = 17/265 (6%) Query: 4 YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ + +++ G+ D T T FG R+DLSK FP++T +K KS Sbjct: 8 FINMCKDILENGTSTEGEKVRPHWPDGTPAYTIKKFGVVNRYDLSKEFPIMTLRKTALKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 E+LW + SN +H IWDEWAD+ G +G YG Q Y DQI Sbjct: 68 ATDEILWIYQKKSN--NIHDLNSHIWDEWADETGSIGKAYGYQIGQKSIYKEGEFDQIDR 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168 ++ L+ +P+SRR + + + + + +M L PC + V K L+ L QRS Sbjct: 126 VIYDLKNNPFSRRIMTNTYVFSDLHEMNLYPCAYSVTYNVTQKKGEDKLTLNAILNQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 DV +N+ Y++L MLA V GE +H + D H+Y+ H + R P P Sbjct: 186 DVLAANNWNVVQYAVLVHMLAQVCDMNVGELVHVIADAHIYDRHVPLIKELIERKPLPAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYE 253 + +NP+I D F D +L YE Sbjct: 246 KFHLNPDIKDFYEFTRNDVSLEGYE 270 >gi|154500728|ref|ZP_02038766.1| hypothetical protein BACCAP_04406 [Bacteroides capillosus ATCC 29799] gi|150270617|gb|EDM97926.1| hypothetical protein BACCAP_04406 [Bacteroides capillosus ATCC 29799] Length = 276 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 12/267 (4%) Query: 8 LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 + ++ G+ D T FG R+DL K FP+ T +K+ +KS + E Sbjct: 12 CKDILAHGTWDTDQAVRPRWDDGASAHTIKLFGVVNRYDLKKEFPVQTIRKMAFKSSLDE 71 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 LLW + SN +H IWD WAD++G +G YG Q Y DQ+ ++ Sbjct: 72 LLWIWQKKSN--NIHDLNSHIWDAWADENGSIGKAYGYQLGVKHVYPEGEFDQVDRVLYD 129 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 L+ +P SRR + + +N + +MAL PC F V L+ L QRS D+ +N+ Sbjct: 130 LKHNPASRRIMTNLYNHHDLHEMALYPCAYSMTFNVTGKTLNAILNQRSQDMLTANGWNV 189 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 Y+ L MLA V G + GE +H + D H+Y+ H + ++R P P++ ++ + D Sbjct: 190 MQYAALVHMLARVSGLEAGELVHVIADAHIYDRHVPIVEEIIARKPYDAPKLWMDTEVDD 249 Query: 239 LLSFRYEDFTLRSYEPHAA-ILAKVSV 264 +F + L Y+ H + V+V Sbjct: 250 FYAFTRDSLKLEGYQSHPLDVKIPVAV 276 >gi|6707737|sp|O30397|TYSY1_BACAM RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1; AltName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|2293412|gb|AAC26326.1| thimidylate synthase [Bacillus amyloliquefaciens] Length = 230 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 89/231 (38%), Positives = 136/231 (58%), Gaps = 3/231 (1%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIY 94 FD S+ P+LTTKK+ WK+ + ELLW + ++V+ L++ V IWD+W +DG +G Y Sbjct: 1 FDNSE-VPILTTKKLAWKTAIKELLWIWQLKSNDVNDLNKMSVHIWDQWKQEDGTIGHAY 59 Query: 95 GVQWRSWPDY-DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 G Q +G +DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+Y Sbjct: 60 GFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWY 119 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 V +GKL ++ RS D+ LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H Sbjct: 120 VKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHI 179 Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +Q+ R P++ INP + D F +DF L +Y+ +L +V V Sbjct: 180 DNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVPV 230 >gi|293115507|ref|ZP_05791824.2| thymidylate synthase [Butyrivibrio crossotus DSM 2876] gi|292809488|gb|EFF68693.1| thymidylate synthase [Butyrivibrio crossotus DSM 2876] Length = 283 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++D+ + +++ G D T T FG R+DLSK FPL+T +K Sbjct: 7 KVFIDMCKDILENGVSTEGEKVRPHWEDGTPAYTIKKFGVVNRYDLSKEFPLVTLRKTAL 66 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS ELLW + SN +H IWD WAD++G +G YG Q Y ++DQ+ Sbjct: 67 KSATDELLWIWQKKSN--NIHDLHSHIWDAWADENGSIGKAYGYQLGVKHRYKEGMMDQV 124 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166 ++ L+ +P+SRR + + + + +M L PC F V K L+ L QR Sbjct: 125 DRVIYDLKNNPFSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTQKKGEDKLTLNAILNQR 184 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S D+ +N+A Y++L MLA V Q GE +H + D H+Y+ H + +SR Sbjct: 185 SQDILTANNWNVAQYAVLVHMLAQVCDMQVGELVHVIADAHIYDRHIPIVEELISRECYD 244 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P +NP + D F +D ++ +Y + V++ Sbjct: 245 APTFHLNPEVKDFYKFTRDDVSVDNYITGPQVTNIPVAI 283 >gi|204789674|gb|ACI02050.1| hypothetical protein [uncultured bacterium] Length = 285 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 19/277 (6%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 +++++R ++ G D T T FG R+DL K P++T +K KS Sbjct: 12 FINMVRDILDNGCSTEGEKVRPHWEDGTSAYTIKKFGVVNRYDLRKECPIITLRKTALKS 71 Query: 55 VVHELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 ELLW + +NV+ L IWDEWAD+ G +G YG Q Y ++DQ+ Sbjct: 72 ATDELLWIWQKKSNNVNELS---SHIWDEWADETGSIGKAYGYQMGVKHQYKEGMMDQVD 128 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRS 167 ++ L+ +P+SRR + + + + +M L PC F V K L L QRS Sbjct: 129 RVIFDLKNNPFSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTQRKGEDKLTLHAILNQRS 188 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DV +N+ Y++L MLA GEF+H + D H+Y+ H + + R Sbjct: 189 QDVLTANNWNVVQYAVLVHMLAQCCDMYVGEFMHVIADAHIYDRHIPLVEELIKRPVFDA 248 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P+ +NP+I D F +D + Y+ I V++ Sbjct: 249 PKFFMNPDIKDFYKFTKDDVWVEGYQYGEQISIPVAI 285 >gi|114672497|ref|XP_001150227.1| PREDICTED: thymidylate synthetase isoform 1 [Pan troglodytes] Length = 230 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 88/192 (45%), Positives = 121/192 (63%), Gaps = 5/192 (2%) Query: 78 SIWDEWADKDGELGP----IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 I KD G ++G+Q R S DY G +DQ+ ++ +++++P RR I+ A Sbjct: 39 HILRCGVRKDDRTGTGTLSVFGMQARYSLRDYSGQGVDQLQRVIDTIKSNPDDRRIIMCA 98 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + Sbjct: 99 WNPRDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHIT 158 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + G+FIHTLGD H+Y NH E +QL R PR P++ I + + F+ EDF + Y Sbjct: 159 GLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFQIEGY 218 Query: 253 EPHAAILAKVSV 264 PH I +++V Sbjct: 219 NPHPTIKMEMAV 230 Score = 60.3 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 23/38 (60%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK 40 QYL + H+++ G + DRTG GT S FG Q R+ L Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRD 69 >gi|322368138|ref|ZP_08042707.1| thymidylate synthase [Haladaptatus paucihalophilus DX253] gi|320552154|gb|EFW93799.1| thymidylate synthase [Haladaptatus paucihalophilus DX253] Length = 330 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 113/332 (34%), Positives = 157/332 (47%), Gaps = 72/332 (21%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYL L+ V++ G+ + +RTGV T STF DL +G+PLLTTKK+ W S++H Sbjct: 1 MKQYLGLVEDVLRDGTYKPNRTGVDTISTFSQHYEVDLREGYPLLTTKKMDGFRWDSMLH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102 ELLW+L G+ ++ L IW+EWAD+DG L YG WR +P Sbjct: 61 ELLWYLSGEEHIRNLREK-TGIWNEWADEDGTLDTAYGRFWRRFPVPEEGLPGESWPEAD 119 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159 + DQI ++ L +P SRR +VSAW+ A LPPCH F V L Sbjct: 120 HRWMNEDGTFDQIQYLIDGLDENPNSRRFVVSAWHPANAAVSTLPPCHYTFVVNVQGDTL 179 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY---------- 209 + L QRSGDV LGIPFN+A+Y+LL +LA GF+ G+F HT+ D H+Y Sbjct: 180 NLHLTQRSGDVALGIPFNVAAYALLATVLARQTGFEVGKFAHTIVDAHVYCGEGDRGEWY 239 Query: 210 --------------------------------------NNHFEQADLQLSRSPRTLPQMI 231 +H QLSR+P++ P++ Sbjct: 240 RDNLEDLQTRLADVTQKSEYEEVREWLESEAPEEETEAMDHVPGLLTQLSRTPKSRPEIE 299 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 + + Y+D LR Y+ H I V+ Sbjct: 300 V--AADSIDELTYDDIVLREYDAHPGIKFSVA 329 >gi|239995918|ref|ZP_04716442.1| thymidylate synthase [Alteromonas macleodii ATCC 27126] Length = 182 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 101/181 (55%), Positives = 128/181 (70%), Gaps = 13/181 (7%) Query: 97 QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID-------------KMAL 143 QWRSW DG +DQI+ +V+ ++ +P SRR IVS WN A++ K AL Sbjct: 2 QWRSWDRGDGTSVDQIAEVVEQIKNNPDSRRLIVSGWNPAVLPDTNYSPKENAAMGKQAL 61 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 PPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLTMM+A V + G+FIHTL Sbjct: 62 PPCHTLFQFYVLDGKLSCQLYQRSGDIFLGVPFNIASYALLTMMMAQVCDLEPGDFIHTL 121 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 GD HLY+NH EQ +LQLSR P P M INP + D+ F ++DFTL++Y+ H I A V+ Sbjct: 122 GDAHLYSNHLEQVELQLSREPFERPTMEINPEVKDIFGFSFDDFTLKNYQSHPHIKAPVA 181 Query: 264 V 264 + Sbjct: 182 I 182 >gi|18150849|dbj|BAB83676.1| thymidylate synthase [Homo sapiens] gi|119622125|gb|EAX01720.1| thymidylate synthetase, isoform CRA_e [Homo sapiens] Length = 230 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 88/192 (45%), Positives = 120/192 (62%), Gaps = 5/192 (2%) Query: 78 SIWDEWADKDGELGP----IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 I KD G ++G+Q R S DY G +DQ+ ++ +++ +P RR I+ A Sbjct: 39 HILRCGVRKDDRTGTGTLSVFGMQARYSLRDYSGQGVDQLQRVIDTIKTNPDDRRIIMCA 98 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN + MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + Sbjct: 99 WNPRDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHIT 158 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 G + G+FIHTLGD H+Y NH E +QL R PR P++ I + + F+ EDF + Y Sbjct: 159 GLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGY 218 Query: 253 EPHAAILAKVSV 264 PH I +++V Sbjct: 219 NPHPTIKMEMAV 230 Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 24/38 (63%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK 40 QYL ++H+++ G + DRTG GT S FG Q R+ L Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRD 69 >gi|23343946|gb|AAN16904.1| mutant thymidilate synthetase [Vibrio cholerae] Length = 283 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D+ + FPL+TT+K WK+ V E Sbjct: 1 MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+ + ++G +YGVQ R+W DG Sbjct: 61 LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N L PC F + L QR Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV L + FN+ + ++A + G + G H + + H+Y + E D+QL R P Sbjct: 181 SCDVPLWLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 PQ INP I L +DF + Y+ H I SV Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283 >gi|258513542|ref|YP_003189764.1| thymidylate synthase [Desulfotomaculum acetoxidans DSM 771] gi|257777247|gb|ACV61141.1| thymidylate synthase [Desulfotomaculum acetoxidans DSM 771] Length = 276 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 131/268 (48%), Gaps = 12/268 (4%) Query: 7 LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 + + ++ G D T F R++LS+ FP+LT + + K+ + Sbjct: 11 MCKEILDKGISSEGEEVRAKWTDGMPAHTIKRFAVVNRYNLSEEFPILTLRPTNLKAAID 70 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 ELLW + SN ++ SIWD WA+ +G +G YG Q Y DQ+ I+ Sbjct: 71 ELLWIWQKKSN--NINDLNSSIWDSWANDEGSIGKAYGYQLGIKHKYREGEFDQVDRILY 128 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 LR PYSRR I + +N + + +M L PC F V KL+ L QRS DV + +N Sbjct: 129 DLRHTPYSRRIIANMYNHSDLHEMNLYPCAYSMTFNVTGRKLNAILNQRSQDVLVANNWN 188 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 +A Y++L M A V F+ GEF+H + D H+Y+ H + R+ P+++INP+ Sbjct: 189 VAQYAILIHMFAQVSSFEAGEFVHVIADAHIYDRHIPIIKELIQRTSYPAPRLLINPDKK 248 Query: 238 DLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 F +DF L Y+ + I V+V Sbjct: 249 HFYDFTVDDFLLEGYQTNEQIRNIPVAV 276 >gi|331090655|ref|ZP_08339504.1| thymidylate synthase [Lachnospiraceae bacterium 2_1_46FAA] gi|330400069|gb|EGG79720.1| thymidylate synthase [Lachnospiraceae bacterium 2_1_46FAA] Length = 282 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 86/279 (30%), Positives = 130/279 (46%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 ++++ R +I G D + T F R+DLSK FP LT ++ Sbjct: 6 KVFIEMCRDIIDNGVSTEGEKVRPKWEDGSFAYTMKKFCVVNRYDLSKEFPALTLRRTGI 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS V E+LW + SN ++ IWD WAD+DG +G YG Q Y ++DQ+ Sbjct: 66 KSCVDEMLWIWQKKSN--NINDLNSHIWDSWADEDGSIGKAYGYQMSVKHQYKEGMMDQV 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQR 166 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QR Sbjct: 124 DRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSVTFNVTKKNDSDKLVLNAILNQR 183 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S DV +N+ Y++L MLA V Q GE +H + D H+Y+ H + +SR Sbjct: 184 SQDVLAANNWNVCQYAVLVHMLAQVCDMQVGELVHVIADAHIYDRHIPLIEELISRESYP 243 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P +NP I D F +D L +Y+ I ++V Sbjct: 244 APAFWLNPEIKDFYEFTTDDVRLDNYQTGPQIKNIPIAV 282 >gi|257784436|ref|YP_003179653.1| thymidylate synthase [Atopobium parvulum DSM 20469] gi|257472943|gb|ACV51062.1| thymidylate synthase [Atopobium parvulum DSM 20469] Length = 282 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 20/278 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++D+ +I+ G+ D T T FG R+DL + FP LT ++ KS Sbjct: 8 FIDMCSDIIENGTTTEGEKVRPTWEDGTSAYTIKKFGVCNRYDLREEFPALTLRRTALKS 67 Query: 55 VVHELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + +NV+ L IWD WAD+ G +G YG Q Y DQ+ Sbjct: 68 AMDEVLWIYQKKSNNVNDL---NSHIWDSWADESGSIGKAYGYQVGQVSHYADGDYDQMD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRS 167 +++ L+ +P+SRR + + + A + +M L PC + V G L+ L QRS Sbjct: 125 RVLKDLKENPFSRRIMTNLYTFADLSEMNLYPCAFNAIYNVTQGAGKNRPTLNLLLVQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ Y++L MM+A V G + GE +H + D H+Y+ H + +SR Sbjct: 185 QDILAANNWNVCQYAILLMMVAQVSGMEAGELVHMIADAHIYDRHVDIVKELISRPTFDA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P++ +NPNI + F +D + Y+ + ++V Sbjct: 245 PKVSLNPNITNFYDFTTDDLIVEDYQHGPQVKNIPIAV 282 >gi|6686055|sp|O30394|TYSY_BACAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A gi|2293406|gb|AAC26323.1| thymidylate synthase [Bacillus atrophaeus] Length = 227 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 86/226 (38%), Positives = 132/226 (58%), Gaps = 2/226 (0%) Query: 41 GFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR 99 P+LTTKK+ WK+ + ELLW + ++V+ L++ V IWD+W +DG +G YG Q Sbjct: 2 EVPILTTKKLAWKTAIKELLWIWQLKSNDVNDLNKMSVHIWDQWKQEDGTIGHAYGFQLG 61 Query: 100 SWPDY-DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK 158 +G +DQ+ ++ L+ +P SRRHI WN +D MAL PC Q+YV +GK Sbjct: 62 KKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGK 121 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 L ++ RS D+ LG PFN+ Y++L M+A V G++ GE+I +GD H+Y H + + Sbjct: 122 LHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKI 181 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+ R P++ INP + D F +DF L +Y+ +L +V V Sbjct: 182 QMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVRV 227 >gi|239625648|ref|ZP_04668679.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519878|gb|EEQ59744.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 278 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 86/269 (31%), Positives = 127/269 (47%), Gaps = 16/269 (5%) Query: 8 LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 R ++ G D T T FG R+DLSK FP++T ++ +KS V E Sbjct: 14 CRDILDNGVWDTDYDVRPVWEDGTPAHTIKRFGIVNRYDLSKEFPVITLRRTAFKSAVDE 73 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 LLW + SN +H IWD WAD+DG +G YG Q Y DQ+ I+ Sbjct: 74 LLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQLGVKHHYKEGDFDQVDRILHD 131 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 L+ +P SRR + + +N + +M L PC F V L+ L QRS D+ +N+ Sbjct: 132 LKHNPLSRRIMSNIYNHHDLHEMNLYPCAYSMTFNVSGNTLNGILNQRSQDMLTANSWNV 191 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 Y++L M A V G GE +H + D H+Y+ H + L + P P + ++ +I D Sbjct: 192 CQYAILLHMFAQVSGLVAGELVHVIADAHIYDRHIPMVEELLKKEPYPGPTLAMDTSITD 251 Query: 239 LLSFRYEDFTLRSYEPHA---AILAKVSV 264 F F L +Y+ HA I V++ Sbjct: 252 FYQFTTSSFRLENYQYHAFEHKI--PVAI 278 >gi|281335085|gb|ADA62169.1| Thymidylate synthase [Staphylococcus aureus] Length = 215 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 101/184 (54%), Positives = 127/184 (69%), Gaps = 1/184 (0%) Query: 81 DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 D +A K G LG +YG QWR W D +GN DQ+ S++Q ++ +P SRRHIVSAWN ID Sbjct: 33 DAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAWNPTEIDS 92 Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 MALPPCH +FQFYV GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A G + GEFI Sbjct: 93 MALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECGLEVGEFI 152 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260 HT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE H AI A Sbjct: 153 HTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYESHPAIKA 211 Query: 261 KVSV 264 ++V Sbjct: 212 PIAV 215 >gi|225572661|ref|ZP_03781416.1| hypothetical protein RUMHYD_00849 [Blautia hydrogenotrophica DSM 10507] gi|225039961|gb|EEG50207.1| hypothetical protein RUMHYD_00849 [Blautia hydrogenotrophica DSM 10507] Length = 324 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 20/278 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++ + + V++ G+ D T T FG R+DL K FP LT +K KS Sbjct: 50 FISMCKDVLENGTSTEGEKVRPVWEDGTAAYTIKKFGVVNRYDLRKEFPALTLRKTALKS 109 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 E+LW + +N+ LH IWD WAD+ G +G YG Q +Y ++DQ+ Sbjct: 110 AFDEILWIWQRKSNNIHDLH---SHIWDSWADETGSIGKAYGYQMSVKHEYKEGMMDQVD 166 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V L+ L QRS Sbjct: 167 RVLYDLKNNPYSRRIMTNIYVHQDLHEMHLYPCAYSVTFNVTKEPGCEKLTLNAILNQRS 226 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ +N+ Y+LL M A G Q GE +H + D H+Y+ H + R Sbjct: 227 QDILAANNWNVCQYALLVHMFAQSCGMQAGELVHVIADCHIYDRHVPVIQELIQRPVYPA 286 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P + +NP + D F +D + +Y+ + +++ Sbjct: 287 PTVYLNPEVRDFYQFTVDDLVVENYQAGPQVKNIPIAI 324 >gi|257389045|ref|YP_003178818.1| thymidylate synthase [Halomicrobium mukohataei DSM 12286] gi|257171352|gb|ACV49111.1| thymidylate synthase [Halomicrobium mukohataei DSM 12286] Length = 334 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 113/336 (33%), Positives = 155/336 (46%), Gaps = 76/336 (22%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYLDL+ ++ G+ + +RTGV T ++F DL++GFPLLTTK + W S++H Sbjct: 1 MQQYLDLVDSTLRGGTYKPNRTGVDTVASFSQHYEVDLAEGFPLLTTKDLSGFRWNSLIH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103 ELLW+L G+ ++ L IWD WAD++G L YG WR SWPD Sbjct: 61 ELLWYLSGEEHIRELREE-TGIWDAWADEEGHLDTAYGRFWRRYPIPDDDARLPGESWPD 119 Query: 104 ------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 D DQ++ ++ L +P SRR +V+AW+ A LPPCH F F V G Sbjct: 120 DAHRWVNDDGTFDQLAYVIDQLEENPRSRRLVVNAWHPANATVSTLPPCHYTFVFNVQGG 179 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN------- 210 +L+ L QRSGD+ LG+PFN+A+YSLL +A F+ G F HT+ D H+Y Sbjct: 180 RLNVHLTQRSGDIALGVPFNVAAYSLLAQAVAQRTDFELGSFAHTIVDAHVYCGAGARGE 239 Query: 211 -------------------------------------------NHFEQADLQLSRSPRTL 227 +H Q +R PR Sbjct: 240 WYADNLDGLQERLQHVDAKEDYRAVREWLESTAPAEDDGHEGYDHVPGLLEQCAREPRKR 299 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P M I L Y+DF L Y+P I V+ Sbjct: 300 PTMEIADTP--LDDLTYDDFELHGYDPAPGISFSVA 333 >gi|160938154|ref|ZP_02085510.1| hypothetical protein CLOBOL_03048 [Clostridium bolteae ATCC BAA-613] gi|158438958|gb|EDP16714.1| hypothetical protein CLOBOL_03048 [Clostridium bolteae ATCC BAA-613] Length = 287 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 82/269 (30%), Positives = 128/269 (47%), Gaps = 16/269 (5%) Query: 8 LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 +++ G D T T FG R+DL++ FP++T ++ +KS V E Sbjct: 23 CNDILEHGVWDTDYDVRPVWEDGTPAHTIKRFGIVNRYDLTREFPVITLRRTAFKSAVDE 82 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 LLW + SN +H IWD WAD++G +G YG Q Y DQ+ I+ Sbjct: 83 LLWIWQKKSN--NIHDLNSHIWDSWADENGSIGKAYGYQLGVKHHYKEGDFDQVDRILYD 140 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 L+ +P SRR + + +N + +M L PC F V L+ L QRS D+ +N+ Sbjct: 141 LKHNPLSRRIMSNIYNHHDLCEMNLYPCAYSMTFNVSGNTLNGILNQRSQDMLTANSWNV 200 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 Y++L MLA V G + GE +H + D H+Y+ H + L R P P + ++ +I + Sbjct: 201 CQYAVLLHMLAQVSGLKPGELVHVIADAHIYDRHIPMVEELLKREPYPGPTLSMDTSIQN 260 Query: 239 LLSFRYEDFTLRSYEPH---AAILAKVSV 264 F + F L Y+ H I V++ Sbjct: 261 FYQFTTDSFRLEHYQYHTFSGKI--PVAI 287 >gi|291522853|emb|CBK81146.1| thymidylate synthase [Coprococcus catus GD/7] Length = 282 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 85/278 (30%), Positives = 133/278 (47%), Gaps = 20/278 (7%) Query: 4 YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++++ R ++ G D + T FG R+DLSK FP LT +K KS Sbjct: 8 FINMCRDILDNGCSTEGEKVRPKWEDGSYAYTMKKFGVVNRYDLSKEFPALTLRKTAIKS 67 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 E+LW + +N+ L ++WDEWAD++G +G YG Q Y ++DQ+ Sbjct: 68 ATDEMLWIWQRKSNNIHDL---NSTVWDEWADENGSIGKAYGYQMGVKHQYKEGMMDQVD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167 ++ L+ +PYSRR + + + + +M L PC F V D L+ L QRS Sbjct: 125 RVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKPGDDKLVLNAILNQRS 184 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DV +N+ YS+L MLA V Q GE +H + D H+Y+ H + +SR Sbjct: 185 QDVLAANNWNVVQYSVLMHMLAQVCDMQVGELVHVIADAHIYDRHIPLIEELISRETHPA 244 Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P +NP+I + F +D T+ +Y I ++V Sbjct: 245 PIFKLNPDIKNFYDFTTKDITIENYVTGPQIKNIPIAV 282 >gi|319645688|ref|ZP_07999919.1| thymidylate synthase [Bacillus sp. BT1B_CT2] gi|317392235|gb|EFV73031.1| thymidylate synthase [Bacillus sp. BT1B_CT2] Length = 283 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 85/267 (31%), Positives = 134/267 (50%), Gaps = 11/267 (4%) Query: 8 LRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 L ++ G + D T T FG +DL K FP+ T + +KS + E Sbjct: 16 LYKILSEGKSDKGQKIRPKWSDDTPAYTLKCFGVLNEYDLQKEFPIATLRPTAFKSGLKE 75 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 +LW + SN L +GV W WA++DG LG YG Q + Y +QI ++ Sbjct: 76 ILWIYQDKSNDVQLLEEKYGVKYWRSWANEDGNLGLAYGRQMQYKHKYKEGYFNQIDRLI 135 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 L+ +PYSRR I + +N + M L PC L + L+ L QRS D + Sbjct: 136 WDLKNNPYSRRIITNLYNHQDLHGMTLYPCAFLTMWDYGGEFLNMTLVQRSSDYLVAGNI 195 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236 N+ Y+LL M+A V G++ G+F H + ++H+Y+ H EQA ++R T P+++I+ +I Sbjct: 196 NVTQYALLQHMIAQVCGYKPGKFHHYINNLHIYDRHIEQAKEIINRESLTAPKLVIDNSI 255 Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVS 263 + ++ E F L Y PH+ I +V+ Sbjct: 256 KNFYDYKPEHFILEGYRPHSQIKLEVA 282 >gi|225019180|ref|ZP_03708372.1| hypothetical protein CLOSTMETH_03132 [Clostridium methylpentosum DSM 5476] gi|224948032|gb|EEG29241.1| hypothetical protein CLOSTMETH_03132 [Clostridium methylpentosum DSM 5476] Length = 276 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 12/267 (4%) Query: 8 LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 R ++ G+ D T+ FG R+DLS+ FPLLT +K++ ++ + E Sbjct: 12 CRSILNDGTWDTEYNVRPRWEDGQPAHTKKQFGIVNRYDLSREFPLLTLRKINTRAAIDE 71 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 +LW + SN + IWD WAD+ G +G YG Q +Y + DQ+ ++ Sbjct: 72 ILWIWQKKSN--NVQDLNSKIWDSWADESGSIGKAYGYQMAVKHEYSDGMFDQVDRVLHD 129 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 L+ +P SRR + + + + +M L PC F V KL+ L QRS D+ + +NI Sbjct: 130 LKNNPNSRRMLTNIYVHQDLHEMNLYPCAYSVTFNVSGNKLNAILNQRSQDMLVANGWNI 189 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 Y+ L M A V G GE +H + D H+Y+ H + + + P P++ IN + D Sbjct: 190 CQYAALIHMFAQVSGLVAGELVHVIADAHIYDRHIPIIEKLIEQQPFPAPRLEINEEVTD 249 Query: 239 LLSFRYEDFTLRSYEPHAAI-LAKVSV 264 F +DF Y+ H +V+V Sbjct: 250 FYRFTPDDFAFPDYQYHPFNQKIEVAV 276 >gi|642840|gb|AAA62156.1| thymidylate synthase [Bacillus phage beta22] Length = 292 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 26/286 (9%) Query: 4 YLDLLRHVIKFGSDRRD---------RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 Y ++++ ++ G +D T T+S QM+FD + P+LT K+V WK+ Sbjct: 8 YSNVVKEILDHGIWDKDQDVRTKWADGTPAYTKSVISTQMKFDNKE-VPILTQKRVAWKT 66 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDG----ELGPIYGVQWRS--------- 100 + E+L F + + Y H+H + IWDEW KDG +GP YG Q Sbjct: 67 AIKEILAFWKDKEYRFDYFHKHNIHIWDEWEIKDGKWKGTIGPSYGYQMGKLVRKGELLD 126 Query: 101 --WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK 158 + ++DQ+ ++ L +P SRRHI S WN+ +D+MAL PC Q+ V G Sbjct: 127 IVHGEPTYKMLDQVDYLLDQLNTNPSSRRHITSLWNIHDLDEMALNPCVWNTQWLVKEGS 186 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 L + S D+ LG PFN+ Y +L M+A V G++ G + D H+Y H E + Sbjct: 187 LHLIVGVPSNDMGLGNPFNVFQYYVLQRMIAQVTGYEIGTLTFNINDAHIYERHIEPLEK 246 Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+S P + INP I + F +DF L YE I +V++ Sbjct: 247 QISLPSYPAPILRINPEIKNFYDFTIDDFDLVGYEHGPTISMEVAI 292 >gi|295698569|ref|YP_003603224.1| thymidylate synthase [Candidatus Riesia pediculicola USDA] gi|291157314|gb|ADD79759.1| thymidylate synthase [Candidatus Riesia pediculicola USDA] Length = 283 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 142/283 (50%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QY+DL R +I G + +RT + + +D+ FPL+TT+K+ +KS + E Sbjct: 1 MKQYIDLCRKIIHEGCWIKNNRTKTRCLTIINADLEYDVENNQFPLITTRKISYKSAISE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106 ++ +RG + G ++W+ A+++ +LG IYGVQ RSW +DG Sbjct: 61 MIGHIRGYRSAKQFRDLGCNVWEANANQNKSWLSNPYRKGRDDLGRIYGVQGRSWKKHDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +DQ+ ++Q L+ R I++ +N I+ L PC F + + KL YQR Sbjct: 121 SHLDQLRKVIQHLKDGIDDRAEIITFYNPGEIEMGCLIPCMHTHTFSILDKKLYLTSYQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ FN +L ++A + ++ G+ H + + H+Y N D+QL RSP Sbjct: 181 SCDVPLGLSFNQIQCFILLALVAQITNYKPGKVYHKIVNAHIYENQLSLMRDVQLKRSPY 240 Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264 L ++IINP I L +DF + +Y H I +V Sbjct: 241 PLSKLIINPKIKKLEDIENWVSSDDFKVINYRFHGKISYPFNV 283 >gi|266624663|ref|ZP_06117598.1| thymidylate synthase [Clostridium hathewayi DSM 13479] gi|288863469|gb|EFC95767.1| thymidylate synthase [Clostridium hathewayi DSM 13479] Length = 276 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 128/267 (47%), Gaps = 12/267 (4%) Query: 8 LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 R ++ G D T T FG R+DLSK FP+LT ++ +KS + E Sbjct: 12 CREILSDGVWDTDSLVRPVWEDGTPAHTIKKFGIINRYDLSKEFPILTLRRTAFKSAIDE 71 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 LLW + SN +H IWD WAD+ G +G YG Q Y DQ+ ++ Sbjct: 72 LLWIWQKKSN--NIHDLNSHIWDSWADETGSIGKAYGYQLGIRYQYKEGEFDQVDRVLFD 129 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 L+ +P SRR + + +N + +M L PC F V L+ L QRS D+ +N+ Sbjct: 130 LKHNPLSRRIMTNLYNHQDLHEMNLYPCAYSMTFNVSGNVLNGILNQRSQDMLTANNWNV 189 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 Y++L M ASV G Q GE +H + D H+Y+ H + ++P P+ I+ P I D Sbjct: 190 TQYAVLLHMFASVSGLQAGELVHVIADAHIYDRHVPIVKEMIEKTPYDAPKFIMGPEIHD 249 Query: 239 LLSFRYEDFTLRSYEPHA-AILAKVSV 264 SF + F L Y+ HA V++ Sbjct: 250 FYSFTKDSFRLEDYQYHAFTDKIPVAI 276 >gi|154272075|ref|XP_001536890.1| thymidylate synthase [Ajellomyces capsulatus NAm1] gi|150408877|gb|EDN04333.1| thymidylate synthase [Ajellomyces capsulatus NAm1] Length = 315 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 113/262 (43%), Positives = 142/262 (54%), Gaps = 57/262 (21%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46 HQYL L+R +++ G R DRTG GT S F Q+RF LSK PLLT Sbjct: 47 HQYLRLIRSILETGEHRPDRTGTGTCSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+Y Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166 Query: 95 GVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 G QWR + DY G +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226 Query: 147 HCLFQFYV----------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 H QFYV G LSCQLYQRS D+ LG+PFNIASY+LL Sbjct: 227 HMFAQFYVSFPAGDRDDGGEENEDQNEKEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286 Query: 185 TMMLASVIGFQYGEFIHTLGDV 206 T MLA G IHT+GD Sbjct: 287 THMLAHAADLHPGTLIHTMGDA 308 >gi|238923626|ref|YP_002937142.1| thymidylate synthase [Eubacterium rectale ATCC 33656] gi|238875301|gb|ACR75008.1| thymidylate synthase [Eubacterium rectale ATCC 33656] gi|291525685|emb|CBK91272.1| thymidylate synthase [Eubacterium rectale DSM 17629] gi|291528190|emb|CBK93776.1| thymidylate synthase [Eubacterium rectale M104/1] Length = 282 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 83/274 (30%), Positives = 128/274 (46%), Gaps = 18/274 (6%) Query: 7 LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 + + +++ G+ D T T FG R+DLSK FP +T +K + KS Sbjct: 11 MCQDILENGTSTEGELVRPHWEDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTYIKSATD 70 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 ELLW + SN +H +WDEWAD+DG +G YG Q Y ++DQ+ ++ Sbjct: 71 ELLWIWQKKSN--NIHDLKSHVWDEWADEDGSIGKAYGYQLGVKHQYKEGMMDQVDRVIY 128 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGDVF 171 L+ P+SRR + + + + +M L PC F V K L+ L QRS DV Sbjct: 129 DLKHTPFSRRILTNIYVHQDLHEMNLYPCAYSMTFNVTQKKGDDRLTLNGILNQRSQDVL 188 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 +N+ Y++L MLA V + GE +H + D H+Y+ H + R P+ Sbjct: 189 AANNWNVCQYAVLMHMLAQVCDMRVGELVHVIADAHIYDRHVPIVKELIERPQYDAPKFW 248 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 +NP+I D F +D + Y I ++V Sbjct: 249 LNPDIKDFYQFTTDDIKITDYVTGEQIKDIPIAV 282 >gi|33152142|ref|NP_873495.1| thymidylate synthase [Haemophilus ducreyi 35000HP] gi|38372558|sp|Q7VMH2|TYSY_HAEDU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|33148364|gb|AAP95884.1| thymidylate synthase [Haemophilus ducreyi 35000HP] Length = 283 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 19/283 (6%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G + RT + + +D++KG FPL+TT+K WK+ + E Sbjct: 1 MKQYLDLCHRILNEGKWVKNKRTDKLCLTVINADLTYDVAKGEFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL ++RG N + + G WD A+++ ++G +YG R +P D Sbjct: 61 LLGYIRGYDNAADFRQLGTKSWDANANQNADWLANPYRKGVDDMGLVYGAIGRKFPKADH 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +D + IV L +R I + ++ L PC F + +G L QR Sbjct: 121 GSLDLLKQIVDDLSNGIDNRGEIYTFYHPGAFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225 S DV LG+ +N+ ++A + + G+ H + + H+Y + D+QL R P Sbjct: 181 SADVPLGLNWNMVQCYTFLALMAQITNHKAGQVFHKIVNAHIYEDQLALMRDVQLKREPF 240 Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264 P + INP I L +DF + +Y H +I S+ Sbjct: 241 ATPTLTINPAIKSLEDLEIWVTLDDFKVENYFYHPSIQYPFSI 283 >gi|311992725|ref|YP_004009593.1| Td thymidylate synthase [Acinetobacter phage Ac42] gi|298684508|gb|ADI96469.1| Td thymidylate synthase [Acinetobacter phage Ac42] Length = 291 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 89/286 (31%), Positives = 137/286 (47%), Gaps = 23/286 (8%) Query: 1 MHQYLDLLRHVIKFG-SDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Y + LR ++ G DRTGVGT + FG ++D+S+ P+LT +KV WKS+V E+ Sbjct: 7 MRDYDNALRDILDTGFHIDGDRTGVGTIAKFGVNTKYDISERVPVLTKRKVAWKSIVKEV 66 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP----DYDG 106 LW++ G SN++ L G IW W K+ G G +YG + D + Sbjct: 67 LWYISGSSNINDLEDMGAKIWTPWKSKEFETKHGLPEGSAGYVYGFNLIHFGADVKDTNP 126 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LS 160 +Q+ ++ +LRA+P SR+ + W ++ LP CH + F V K L+ Sbjct: 127 KGFNQLDYVINTLRANPKSRQACFTFWRPDTNNQAILPACHAFYSFIVSPDKNGEMNVLN 186 Query: 161 CQLYQRSGDVFLGIPF-NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 C L+QRS D +G+ NI + +L T M+A +G G H+ H+Y N + Sbjct: 187 CHLFQRSADYPIGVGMGNILTATLFTYMIAQQLGMTPGHVYHSGAHCHVYKNAIDATVEY 246 Query: 220 LSRSPRT-LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R P + +N + + EDF L Y P I ++V Sbjct: 247 LEREDEPDSPILKLN-KRDSIYDYVPEDFELIDYNPLPPIKFNIAV 291 >gi|119622122|gb|EAX01717.1| thymidylate synthetase, isoform CRA_b [Homo sapiens] Length = 165 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 80/162 (49%), Positives = 109/162 (67%) Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ+ ++ +++ +P RR I+ AWN + MALPPCH L QFYV N +LSCQ Sbjct: 4 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 63 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E +QL R Sbjct: 64 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 123 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I + + F+ EDF + Y PH I +++V Sbjct: 124 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 165 >gi|34419266|ref|NP_899279.1| dTMP (thymidylate) synthase [Vibrio phage KVP40] gi|34332947|gb|AAQ64102.1| dTMP (thymidylate) synthase [Vibrio phage KVP40] Length = 300 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 115/300 (38%), Positives = 159/300 (53%), Gaps = 38/300 (12%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M YL L ++ G +RTG T S ++R+DLSKGFPLLTTKK+ K++ ELL Sbjct: 2 MKNYLQLCTEILNEGDFLENRTGTNTVSVISRELRWDLSKGFPLLTTKKMATKAIFGELL 61 Query: 61 WFLRGDSNVSYLHRH------GVSIWDEWADK-------------DGELGPIYGVQWRSW 101 WFL G +S L ++ IW + D+ + +LG +YG WR Sbjct: 62 WFLSGSGLISDLRKYTELSDEDFCIWQQNLDELNERAKKAGIVRNEDDLGYVYGKVWRKR 121 Query: 102 ----PDYDGNVIDQISSIVQSL---RADPYS---RRHIVSAWNV-----ALIDKMALPPC 146 D + DQI ++ + + DP RR IV AW+ + +ALPPC Sbjct: 122 LSVTADKEVTEFDQIHQLLCDIAAVKEDPTQSAQRRMIVEAWDPYFHTESNSVDVALPPC 181 Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206 H FQ +V NGK+S + QRS D FLG+PFNIASY+LL +LA + G + GE I + GDV Sbjct: 182 HYGFQVFVRNGKISLKWNQRSVDTFLGLPFNIASYALLVHILAQLTGLKVGELIFSGGDV 241 Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKVS 263 H+Y +H Q QL R+PR LPQ+ + P L R DF + Y+P+ A+ K+S Sbjct: 242 HIYEDHIVQVLKQLRRTPRELPQIQL-PEFDTLSQLLTKRASDFVVYDYDPYPALKGKMS 300 >gi|139436967|ref|ZP_01771127.1| Hypothetical protein COLAER_00100 [Collinsella aerofaciens ATCC 25986] gi|133776614|gb|EBA40434.1| Hypothetical protein COLAER_00100 [Collinsella aerofaciens ATCC 25986] Length = 282 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 18/279 (6%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 Q++ + R ++ G+ D T T FG R+DL + FP LT ++ Sbjct: 6 QQFVAMCRDILDHGTTTEGQKVRPVWEDGTPAYTIKNFGVTARYDLREEFPALTLRRTAL 65 Query: 53 KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 KS + E+LW + SN +H IWDEWAD+ G +G YG Q Y DQ+ Sbjct: 66 KSAMDEILWIYQKKSN--NVHDLNSHIWDEWADETGSIGKAYGYQIGQKSHYAEGDFDQM 123 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQR 166 ++ L+ PYSRR + + + + + +M L PC + V D L+ L QR Sbjct: 124 DRVLYDLKHTPYSRRIMTNTYVFSDLSEMHLYPCAYSVTYNVTQRPQDDKPTLNMILNQR 183 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S D+ +N+ Y++L MM+A + GE +H + D H+Y+ H + + R Sbjct: 184 SQDILAANNWNVCQYAILLMMVAQSVDMIPGELLHVIADAHIYDRHVDIVRELIERPQFA 243 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P++ +NP++ D +F +D + YE + ++V Sbjct: 244 APKVTLNPDVHDFYAFTTDDLIVEGYEHGPQVKNIPIAV 282 >gi|255994719|ref|ZP_05427854.1| thymidylate synthase [Eubacterium saphenum ATCC 49989] gi|255993432|gb|EEU03521.1| thymidylate synthase [Eubacterium saphenum ATCC 49989] Length = 276 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 14/270 (5%) Query: 6 DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 ++ ++ G + D T T FG +DLS+ FP LT + K V Sbjct: 10 NMCSKILSQGYSSKGQKVRAKWSDGTPAHTIKMFGIVNEYDLSEEFPALTLRPTAIKLAV 69 Query: 57 HELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 ELLW + +N+ L SIWDEWAD++G +G YG Q + +DQ+ ++ Sbjct: 70 DELLWIWQRKSNNIKDL---NSSIWDEWADENGSIGKAYGYQMAKKYKFAQGEMDQVDNV 126 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 + L+ +PYSRR + + +N + I +M L PC F V KL+ L QRS D+ Sbjct: 127 IWQLKNNPYSRRILTNIYNFSDISEMNLEPCAYSMTFNVTGDKLNGILNQRSQDILAANN 186 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 +N+ YS+L +L+ V GF+ G+ +H + D H+Y+ H + +SR P+ I+ Sbjct: 187 WNVVQYSVLLHLLSKVCGFKPGKLVHVIADAHIYDRHIPMIEDLISRKSYDAPKFSIDDG 246 Query: 236 IVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 + D F +D + +Y+ I +++ Sbjct: 247 VDDFYKFSMDDIKVENYKAGPQITDIPIAI 276 >gi|229829347|ref|ZP_04455416.1| hypothetical protein GCWU000342_01434 [Shuttleworthia satelles DSM 14600] gi|229792510|gb|EEP28624.1| hypothetical protein GCWU000342_01434 [Shuttleworthia satelles DSM 14600] Length = 288 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 91/281 (32%), Positives = 134/281 (47%), Gaps = 24/281 (8%) Query: 6 DLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 D+ +I G+ D T T FG R+DLS+ FP +T ++ KS V Sbjct: 10 DMCEEIINRGTGSQGMEVRPRWEDGTPAHTIKRFGVVNRYDLSREFPAITLRRTAIKSCV 69 Query: 57 HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR----SWPDYDGN--VID 110 +E+LW + SN + S+WDEWAD++G +G YG Q D DG+ +D Sbjct: 70 NEMLWIWQKKSN--NIRDLKSSVWDEWADEEGSIGKAYGYQIGKKYLHHTDADGSPVYMD 127 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLY 164 QI +++ LR +P+SRR IV+ +N + +M L PC F V L+ L Sbjct: 128 QIDAVLYDLRHNPFSRRIIVNMYNFDDLHEMHLYPCAYSMTFNVTKNPKSGRMVLNAILN 187 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 QRS DV +N+ Y++L MLA V + GE +H + D H+Y+ H +SR Sbjct: 188 QRSQDVLAANNWNVCQYAVLLHMLAQVCHMEAGELVHVIADAHIYDRHIPLVQELISREQ 247 Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P+ +NP I D F ED L Y+ I ++V Sbjct: 248 FPAPKFWLNPEIHDFYQFTEEDIRLDDYQYGPQIKNIPIAV 288 >gi|219123048|ref|XP_002181844.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406445|gb|EEC46384.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 217 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 105/213 (49%), Positives = 132/213 (61%), Gaps = 23/213 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYLDL RH++ G R DRTG GT S FG QMRF L G PLLTTK+V W+ V ELL Sbjct: 5 RQYLDLCRHILDHGVHRGDRTGTGTLSQFGTQMRFSLRDGTLPLLTTKRVFWRGVAEELL 64 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102 WF+ G++N + L + IWD D G+LGP+YG QWR + Sbjct: 65 WFVAGNTNANDLAAKDIRIWDGNGSPDFLDSWGLGHREVGDLGPVYGFQWRHFGATYGTI 124 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-- 158 DY G +DQ++ + ++ +P RR I+SAWN A ++ MALPPCH QFYVD K Sbjct: 125 HDDYTGKGVDQLAECIDKIKNNPEDRRIILSAWNPADLELMALPPCHMFRQFYVDTEKNE 184 Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 LSCQ+YQRS D+ LG+PFNIASY+LLT M+A V Sbjct: 185 LSCQMYQRSADMGLGVPFNIASYALLTHMIAHV 217 >gi|330891851|gb|EGH24512.1| thymidylate synthase [Pseudomonas syringae pv. mori str. 301020] Length = 298 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 97/287 (33%), Positives = 152/287 (52%), Gaps = 48/287 (16%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 A +D+MALPPCH L+Q + + ++S LY RS D+ LG PFN+ + L ++ + Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239 G+ F + +GD H+Y NH + + Q++R P +P+++I+ + + Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEF 287 >gi|284164961|ref|YP_003403240.1| thymidylate synthase [Haloterrigena turkmenica DSM 5511] gi|284014616|gb|ADB60567.1| thymidylate synthase [Haloterrigena turkmenica DSM 5511] Length = 338 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 112/340 (32%), Positives = 153/340 (45%), Gaps = 80/340 (23%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYL+L+ V+ G+ + +RTGV T S+F DL G+PLLTTK++ W S++H Sbjct: 1 MRQYLELVDTVLSEGTYKPNRTGVDTISSFSEHYEVDLQDGYPLLTTKQMDGYRWNSMLH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103 E+ W+L G+ ++ L IWD WAD +G L YG WR SWPD Sbjct: 61 EVCWYLSGEEHIRDLREE-TKIWDAWADDEGRLDTAYGRFWRRFPIPEDDAQLEGESWPD 119 Query: 104 YDGN----------VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 DQ+ ++ +L P SRR +V+AW+ A LPPCH F F Sbjct: 120 ETHQWVTEEADGRRTFDQLQYVIDTLSDSPNSRRLVVNAWHPANAAVSTLPPCHYSFVFN 179 Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY---- 209 +L+C L QRSGD LGIPFNIA+Y+LLT ++A GF+ G F HT+ D H+Y Sbjct: 180 AQGDRLNCHLTQRSGDTALGIPFNIAAYALLTKVIAQQTGFKPGTFAHTVVDTHVYCGRG 239 Query: 210 ----------------------------------------------NNHFEQADLQLSRS 223 +H QLSR Sbjct: 240 DRGEWYADNLETLQSRLNDVEDREDYLEVKSWLESAAPDEAEGDERLDHVPGLLEQLSRE 299 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 P P + + V + YED L++YE H I V+ Sbjct: 300 PLERPTLEVAD--VSIDELAYEDVELKNYESHEGIEFAVA 337 >gi|229815429|ref|ZP_04445761.1| hypothetical protein COLINT_02477 [Collinsella intestinalis DSM 13280] gi|229808962|gb|EEP44732.1| hypothetical protein COLINT_02477 [Collinsella intestinalis DSM 13280] Length = 282 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 18/274 (6%) Query: 7 LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 + R ++ G+ D T T FG R+DL + FP LT ++ KS + Sbjct: 11 MCRDILDHGTTTEGEKVRPVWEDGTPAYTIKNFGVTNRYDLREEFPALTLRRTALKSAMD 70 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E+LW + SN ++ IWD+WAD+ G +G YG Q Y DQ+ ++ Sbjct: 71 EILWIYQKKSN--NINDLNSHIWDQWADETGSIGKAYGYQIAQKSHYKEGDFDQMDRVLY 128 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVF 171 L PYSRR + + + + + +M L PC + V D L+ L QRS D+ Sbjct: 129 DLTHTPYSRRIMTNMYTFSDLSEMHLYPCAYSVTYNVTSEPGCDKPVLNMVLMQRSQDIL 188 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 +N+ Y++L MM+A GE +H + D H+Y+ H + R P++ Sbjct: 189 AANNWNVCQYAILLMMVARHCDMIAGELLHVIVDAHIYDRHVNIVRELIERPQYPAPKVS 248 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 +NP + + F ED + Y + ++V Sbjct: 249 LNPEVTNFYDFTTEDLIVEDYNHGPQVKNIPIAV 282 >gi|325275840|ref|ZP_08141701.1| thymidylate synthase [Pseudomonas sp. TJI-51] gi|324099024|gb|EGB97009.1| thymidylate synthase [Pseudomonas sp. TJI-51] Length = 306 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 100/306 (32%), Positives = 146/306 (47%), Gaps = 59/306 (19%) Query: 18 RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGV 77 + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ FLRG N G Sbjct: 1 QGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMVGFLRGVKNAGEFRELGC 60 Query: 78 SIWDEWADK------------DGELGPIYGVQWRSWPDYD-------------------- 105 +WD+ A++ +LG IYGVQWR WP Y Sbjct: 61 KVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIPLGNPAAIAMAEQAGFRR 120 Query: 106 --------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 IDQ+ + ++ DP SRR + WN A +D+MALPPCH L+Q Sbjct: 121 IAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWNCAQLDEMALPPCHLLYQ 180 Query: 152 FY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 F+ V+ ++S LY RS D+ LG PFN+ + L + + G+ F + +GD H+Y Sbjct: 181 FHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLALFGRLTGYTPRWFTYFIGDAHVY 240 Query: 210 NNHFEQADLQLSRSPRTLPQMIINP-----------NIVDLLSFRYEDFTLRSYEPHAAI 258 NH + + QL R P P+++I+ L DF L YE HA + Sbjct: 241 ENHLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEKIEPSDFWLEGYEHHAPM 300 Query: 259 LAKVSV 264 A ++V Sbjct: 301 TAPMAV 306 >gi|310831492|ref|YP_003970135.1| putative bifunctional dihydrofolate reductase/thymidylate synthase [Cafeteria roenbergensis virus BV-PW1] gi|309386676|gb|ADO67536.1| putative bifunctional dihydrofolate reductase/thymidylate synthase [Cafeteria roenbergensis virus BV-PW1] Length = 452 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 103/284 (36%), Positives = 153/284 (53%), Gaps = 26/284 (9%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 +YL LL ++ G R+ R T S F + FD+ GFPLLTTKK+ WK +V ELL+F Sbjct: 169 KYLHLLSKILNEGEFRQTRN-ANTWSLFNQNLEFDMKDGFPLLTTKKMFWKGIVEELLFF 227 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD-----------GELGPIYGVQWRSWP--------D 103 +RG +N L GV+IW KD G++G IYG WR + + Sbjct: 228 IRGHTNSKLLEEKGVNIWKGNTSKDFITKLGLPYEEGDMGKIYGFNWRHFGADYINCNTN 287 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF-QFYVDNG-KLSC 161 Y G DQ+ I++ ++ +P SRR ++S ++ A + L PCH L QFYV + L Sbjct: 288 YTGKGFDQLVKIIEEIKTNPSSRRILMSDFDPATSHQGVLYPCHSLVLQFYVRDEDILDV 347 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 ++YQRS D FLG+PFNI+S SLL +++ + G+ +LGD H+Y H +Q QL Sbjct: 348 KMYQRSVDSFLGLPFNISSTSLLLHIISKLTNKTPGKVSLSLGDCHIYETHRDQVIRQLK 407 Query: 222 RSPRTLPQMIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKV 262 R P P++I+ P+ L E++ + +Y H I A++ Sbjct: 408 RLPYNFPKLIL-PDFTSLDQVENSTLENYVIENYLHHKGIKAEM 450 >gi|4103865|gb|AAD01867.1| thymidylate synthase [Enterococcus faecalis] Length = 153 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 82/153 (53%), Positives = 110/153 (71%) Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 ++++++ ++ +P SRR IVSAWN + MALPPCH +FQFYV+ GKLSCQLYQRS DVF Sbjct: 1 LANVIEMIKTNPDSRRLIVSAWNPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVF 60 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+PFNIASY+LLT ++A G + GEF+HTLGD HLY NH EQ QLSR R+ P ++ Sbjct: 61 LGVPFNIASYALLTHLIAHETGLEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLV 120 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +NP+ + F ED + Y+PH I A ++V Sbjct: 121 LNPDKASVFDFDMEDIKVEGYDPHPTIKAPIAV 153 >gi|313126201|ref|YP_004036471.1| thymidylate synthase [Halogeometricum borinquense DSM 11551] gi|312292566|gb|ADQ67026.1| thymidylate synthase [Halogeometricum borinquense DSM 11551] Length = 332 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 111/336 (33%), Positives = 151/336 (44%), Gaps = 78/336 (23%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYLDL+ V+ G + +RTGV T S F DL +GFPLLTTK + W S++H Sbjct: 1 MRQYLDLVTDVLSNGQHKPNRTGVDTISAFSRHYEVDLQEGFPLLTTKDLSGFRWNSLIH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102 E +W+L G+ ++ L IWD WAD++G L YG WR +P Sbjct: 61 EFVWYLSGEEHIRTLREE-TGIWDAWADEEGRLDTAYGRFWRRFPVPDEGLPGEAWPEDT 119 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159 D DQI ++ +LR +P SRR +V+AW+ A LPPCH F F V KL Sbjct: 120 HRWMNDEGTFDQIQYVLDTLRENPNSRRMVVNAWHPANAAVSTLPPCHYSFVFNVQGDKL 179 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN--------- 210 + L QRSGD+ LGIPFNIA+Y+LL +A GF+ G+F HT+ D H+Y Sbjct: 180 NLHLTQRSGDIALGIPFNIAAYALLATAVAQRTGFEVGKFAHTVVDAHVYCGEGDRGAWY 239 Query: 211 -----------------------------------------NHFEQADLQLSRSPRTLPQ 229 +H Q +R P P Sbjct: 240 GDHLSDLQTRLADVSSRDEYLDVRDWLVEAAPAEAEGKERYDHVPGLLKQCAREPGDRPT 299 Query: 230 MIINPNIVD--LLSFRYEDFTLRSYEPHAAILAKVS 263 + ++ D L Y+D L Y+P I V+ Sbjct: 300 I----DVADVPLDELTYDDIELHDYDPDEGIRFAVA 331 >gi|221194598|ref|ZP_03567655.1| thymidylate synthase [Atopobium rimae ATCC 49626] gi|221185502|gb|EEE17892.1| thymidylate synthase [Atopobium rimae ATCC 49626] Length = 282 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 80/274 (29%), Positives = 130/274 (47%), Gaps = 18/274 (6%) Query: 7 LLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 + +I+ G+ D T T FG R+DL + FP LT ++ KS + Sbjct: 11 MCSDIIEHGTTTVGEKVRPHWEDGTPAYTIKKFGVCNRYDLREEFPALTLRRTALKSAMD 70 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E+LW + SN +H IWD WAD+ G +G YG Q Y DQ+ ++ Sbjct: 71 EVLWIYQKKSN--NVHDLNSHIWDAWADESGSIGKAYGYQVGQKSHYAEGDFDQMDRVLY 128 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVF 171 L+ +P+SRR + + + A + +M L PC + V L+ L QRS D+ Sbjct: 129 DLQNNPFSRRIMTNLYTFADLSEMNLYPCAFNAIYNVTQNPGDAKPTLNLLLVQRSQDIL 188 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 +N+ Y++L MM+A V G Q GE +H + D H+Y+ H + +SR P + Sbjct: 189 AANNWNVCQYAILLMMVAQVSGMQAGELVHMISDAHIYDRHVDIVRELISRPIFAAPHVS 248 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 +NP++ D +F +D + +YE + ++V Sbjct: 249 LNPDVTDFYAFTTDDLIVENYEHGPQVKNIPIAV 282 >gi|210633178|ref|ZP_03297714.1| hypothetical protein COLSTE_01627 [Collinsella stercoris DSM 13279] gi|210159218|gb|EEA90189.1| hypothetical protein COLSTE_01627 [Collinsella stercoris DSM 13279] Length = 282 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 18/274 (6%) Query: 7 LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 + R ++ G+ D T T FG R+DL + FP LT ++ KS + Sbjct: 11 MCRDILDHGTTTEGEKVRPRWEDGTPAYTIKNFGITNRYDLREEFPALTLRRTALKSAMD 70 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E+LW + SN ++ IWD+WAD+ G +G YG Q Y DQ+ ++ Sbjct: 71 EILWIYQKKSN--NINDLNSHIWDQWADETGSIGKAYGYQIAQKSHYREGDFDQMDRVLY 128 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVF 171 L PYSRR + + + + + +M L PC + V D L+ L QRS D+ Sbjct: 129 DLTHTPYSRRIMTNMYTFSDLSEMHLYPCAYSVTYNVTSEPGCDKPVLNMVLMQRSQDIL 188 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 +N+ Y++L MM+A GE +H + D H+Y+ H + + R P++ Sbjct: 189 AANNWNVCQYAILLMMVARHCDMIAGELLHVIVDAHIYDRHVDIVRELIERPQFPAPKVS 248 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILA-KVSV 264 +NP + + F +D + Y + ++V Sbjct: 249 LNPEVTNFYDFTTDDLIVEDYNHGPQVKGIPIAV 282 >gi|289450174|ref|YP_003475119.1| thymidylate synthase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184721|gb|ADC91146.1| thymidylate synthase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 276 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 137/267 (51%), Gaps = 12/267 (4%) Query: 8 LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 R++++ G D T T TF R+DLS+ FPLLT +K+++K+ + E Sbjct: 12 CRYILEHGISTVGHTVRPHWPDGTPAHTLKTFALVNRYDLSEEFPLLTLRKINFKAALDE 71 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 +LW + SN + IWD WA +DG +G YG Q Y +DQ+ ++ Sbjct: 72 MLWIWQRKSN--KIADLNSKIWDSWAGEDGTIGKAYGYQLGVKHHYPEGDMDQVDRVLYL 129 Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 LR DPYSRR I + +N A +++M L PC F V +L+ L QRS D+ + +N+ Sbjct: 130 LRNDPYSRRIITNIYNHADLNEMNLYPCAYSVTFNVTGNRLNALLNQRSQDMLVANNWNV 189 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238 A Y+ L +M+A + G++ GE +H + D H+Y+ H + + + + P++ + + D Sbjct: 190 AQYAALLLMIAKITGYEPGELVHVIADAHIYDRHIPLVEELIKQPTYSAPKVELKYSGND 249 Query: 239 LLSFRYEDFTLRSYEPHAAILA-KVSV 264 + +DF + +Y + V++ Sbjct: 250 FYAVNVDDFVVTNYHCGPLLKGIPVAI 276 >gi|289582635|ref|YP_003481101.1| thymidylate synthase [Natrialba magadii ATCC 43099] gi|289532188|gb|ADD06539.1| thymidylate synthase [Natrialba magadii ATCC 43099] Length = 342 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 156/344 (45%), Gaps = 84/344 (24%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYLDL+ + G+ + +RTGV T S+F DL +G+PLLTTK++ W S++H Sbjct: 1 MQQYLDLVDAALSEGAYKPNRTGVDTISSFSEHYEVDLQEGYPLLTTKQMDGYRWNSMLH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102 E+ W+L G+ ++ L IWD WAD++G L YG WR +P Sbjct: 61 EVCWYLSGEEHIQDLREE-TKIWDAWADEEGHLDTAYGRFWRRFPVPEEPAQLPGESWPD 119 Query: 103 ----------DYDG---NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 DG DQ+ ++ +L P SRR +V+AW+ A LPPCH Sbjct: 120 ESHQWVTAEETADGETRRTFDQLQYVIDTLSDSPNSRRLVVNAWHPANAAVSTLPPCHYS 179 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 F F V +L+C L QRSGD+ LGIPFNIA+Y+LLT ++A GF+ G F HT+ D H+Y Sbjct: 180 FVFNVQGDRLNCHLTQRSGDIALGIPFNIAAYALLTKLVAKQTGFEPGTFAHTVVDAHVY 239 Query: 210 --------------------------------------------------NNHFEQADLQ 219 +H Q Sbjct: 240 CGRGDRGEWYADNLEALQTRLADVEERTEYREIREWLESEAPAEADGDERLDHVPGLLEQ 299 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 LSR P P + + + + YED TLR YE H + V+ Sbjct: 300 LSREPLERPTLEV--DAATIDDLSYEDVTLREYESHDGLTFGVA 341 >gi|260589792|ref|ZP_05855705.1| thymidylate synthase [Blautia hansenii DSM 20583] gi|331083219|ref|ZP_08332335.1| thymidylate synthase [Lachnospiraceae bacterium 6_1_63FAA] gi|260540032|gb|EEX20601.1| thymidylate synthase [Blautia hansenii DSM 20583] gi|330404608|gb|EGG84148.1| thymidylate synthase [Lachnospiraceae bacterium 6_1_63FAA] Length = 283 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 21/279 (7%) Query: 4 YLDLLRHVIKFGSDRR--------DRTG--VGTRSTFGYQMRFDLSKGFPLLTTKKVHWK 53 ++ + + +++ G+D + + TG T FG R+DL K FP LT +K K Sbjct: 8 FIRMCQDILENGTDTQGEKVRPKWEDTGEYAYTIKRFGVVNRYDLRKEFPALTLRKTALK 67 Query: 54 SVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112 + + E+LW + +N+ L+ IWD WAD+DG +G YG Y G DQ+ Sbjct: 68 TCMDEILWIYQRKSNNIHDLNG---HIWDAWADEDGSIGTCYGDVVGRKFLYKGEETDQM 124 Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166 +++ L+ +PYSRR + + + + AL PC + V K L+ L QR Sbjct: 125 DYVLKQLKENPYSRRIMTNLYQFEYLHSGALDPCCYSMTYNVTKEKDSEKLVLNGVLNQR 184 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S D+ +N+ Y++L MM+A V GE +H + D H+Y+ H + R Sbjct: 185 SQDILAANNWNVCQYAILLMMVAQVNDMIPGELVHVIADAHIYDRHVPVIQELIKRETFP 244 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 P++ +NP + D F +D + +Y+ I ++V Sbjct: 245 APKVRLNPEVKDFYQFTTDDLIVENYQAGPQIKDIPIAV 283 >gi|222480576|ref|YP_002566813.1| thymidylate synthase [Halorubrum lacusprofundi ATCC 49239] gi|222453478|gb|ACM57743.1| thymidylate synthase [Halorubrum lacusprofundi ATCC 49239] Length = 342 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 156/344 (45%), Gaps = 84/344 (24%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYLDL+ + G+ + +RTGV T +TF Q DLS+GFPLLTTKK+ W S++H Sbjct: 1 MQQYLDLVDDTLSTGTYKPNRTGVDTIATFSGQYTVDLSEGFPLLTTKKMDGYRWNSLIH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----------- 106 E+LW+L G+ ++ L IWD WAD +G L YG WR +P DG Sbjct: 61 EVLWYLSGEEHIRDLREE-TKIWDAWADDEGRLDTAYGRFWRRFPVPDGVDALPGETWPK 119 Query: 107 -----------------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 DQI ++ +L +P SRR +V+AW+ A LPPCH Sbjct: 120 DAHRWVTVEEGPEGVERRTFDQIQYVLDTLDENPRSRRMVVNAWHPANAAVSTLPPCHYT 179 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 F V +G+L+ L QRSGD+ LG+PFNIA+Y+LL LA GF+ GEF HT+ D H+Y Sbjct: 180 FVVNVQDGRLNLHLTQRSGDIALGVPFNIAAYALLANALAQRTGFEIGEFGHTVVDAHIY 239 Query: 210 N--------------------------------------------------NHFEQADLQ 219 +H Q Sbjct: 240 CGRGDRGQWYANNLRYVQDRLATVESKADYLDVKSWVERTAPDEADGEERYDHVPGLLEQ 299 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 LSR PR P++ I L YED + Y+ I V+ Sbjct: 300 LSREPRERPRIEIADKP--LDELTYEDIEVVDYDSADGISFAVA 341 >gi|303232254|ref|ZP_07318953.1| thymidylate synthase [Atopobium vaginae PB189-T1-4] gi|302481664|gb|EFL44725.1| thymidylate synthase [Atopobium vaginae PB189-T1-4] Length = 282 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 18/274 (6%) Query: 7 LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 + +++I+ G+ D T T FG R+DL + FP LT ++ KS V Sbjct: 11 MCQNIIEHGTSTEGQKVRPHWEDGTPAYTIKQFGVCNRYDLRQEFPALTLRRTAIKSAVD 70 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E+LW + SN +H IWD WAD+ G +G YG Q Y +DQ+ ++ Sbjct: 71 EILWIYQKKSN--NIHDLKSHIWDSWADETGSIGKAYGYQIAQVSHYPEGDMDQMDRVLF 128 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVF 171 L +PYSRR I S + + + +M L PC + V L+ L QRS D+ Sbjct: 129 DLTHNPYSRRIITSMYTFSDLSEMHLYPCAYNVIYNVTKTPNEAKPTLNMLLVQRSQDIL 188 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 +N+ Y++L MM+A GE +H + D H+Y+ H +SR PQ+ Sbjct: 189 AANNWNVCQYAVLLMMVAQATNMIPGELVHMIADAHIYDRHIPVVKELISRKEYPAPQVR 248 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 +NP I + F +D + +YE + +++ Sbjct: 249 LNPAITNFYDFTPDDVIVENYEHGPQVTNIPIAI 282 >gi|161610422|gb|ABX74967.1| thymidylate synthase-like protein [Retroperitoneal fibromatosis-associated herpesvirus] Length = 170 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 84/161 (52%), Positives = 109/161 (67%) Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DY G +DQ++ I+ ++ P RR ++SAWN I KMALPPCH L QFYV G+LSCQ Sbjct: 9 DYSGRGVDQLAYILDLIKNHPCDRRMVMSAWNPVDIPKMALPPCHVLCQFYVSAGELSCQ 68 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 LYQRSGD+ LG+PFNIASY+LLT M+A V G + GE IH LGD H+Y NH E +QLSR Sbjct: 69 LYQRSGDMGLGVPFNIASYALLTYMIAHVSGLKPGELIHVLGDAHIYKNHIEAVKVQLSR 128 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 PR P++ I + + F +DF+L Y+PH AI ++ Sbjct: 129 EPRPFPRLHIVRTVSSIEDFTVDDFSLEGYDPHPAIRMDMA 169 >gi|308234518|ref|ZP_07665255.1| thymidylate synthase [Atopobium vaginae DSM 15829] gi|328944113|ref|ZP_08241578.1| thymidylate synthase [Atopobium vaginae DSM 15829] gi|327492082|gb|EGF23856.1| thymidylate synthase [Atopobium vaginae DSM 15829] Length = 282 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 18/277 (6%) Query: 4 YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 ++ + + +I+ G+ D T T FG R+DL + FP LT ++ KS Sbjct: 8 FISMCKDIIEHGTTTQGEKVRPHWEDGTSAYTIKKFGVCNRYDLREEFPALTLRRTALKS 67 Query: 55 VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 + E+LW + SN +H IWD WAD+ G +G YG Q Y +DQ+ Sbjct: 68 AMDEILWIYQKKSN--NIHDLHSHIWDSWADETGSIGKAYGYQIGVKNHYPEGDMDQMDK 125 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168 ++ L+ +PYSRR + S + A + +M L PC + V + + L+ L QRS Sbjct: 126 VLYDLKHNPYSRRIMTSTYTFADLSQMNLYPCAYSAIYNVTHEEGNPQPTLNMLLIQRSQ 185 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+ +N+ Y++L MM+A V Q GE +H + D H+Y+ H + ++R P Sbjct: 186 DILAANNWNVCQYAILLMMVAQVNHMQAGELVHMISDAHIYDRHVDIVKELITRPTYPAP 245 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILA-KVSV 264 + +NP+I + F +D + +Y+ + ++V Sbjct: 246 LVHLNPDIHNFYEFTTDDLIVENYQHGPQVKGIPIAV 282 >gi|292657031|ref|YP_003536928.1| thymidylate synthase [Haloferax volcanii DS2] gi|291372732|gb|ADE04959.1| thymidylate synthase [Haloferax volcanii DS2] Length = 332 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 110/336 (32%), Positives = 155/336 (46%), Gaps = 78/336 (23%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QYLDL+ V+ G + +RTGV T S F DL +GFPLLTTK + W S++H Sbjct: 1 MRQYLDLVTDVLGTGRHKPNRTGVDTISGFSKHYTVDLQEGFPLLTTKDLSGFRWNSLIH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102 ELLW+L G+ ++ L IWD WAD++G L YG WR +P Sbjct: 61 ELLWYLSGEEHIRTLREE-TGIWDAWADEEGHLDTAYGRFWRRYPVPEEGLAGEAWPDDG 119 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159 D DQ++ ++ +L +P SRR +++AW+ A LPPCH F F V +L Sbjct: 120 HRWMNDEGTFDQLAYVLDTLDENPNSRRLVINAWHPANAAVSTLPPCHYTFVFNVQGDEL 179 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN--------- 210 + L QRSGD+ LG+PFN+A+Y++L ++A GF+ G F HT+ D H+Y Sbjct: 180 NLHLTQRSGDIALGVPFNLAAYAILAQVVAQRAGFELGSFAHTIVDAHVYCGAGERGAWY 239 Query: 211 -----------------------------------------NHFEQADLQLSRSPRTLPQ 229 +H LQ SR PR P Sbjct: 240 GDHLDELQSRLADVQSPDEYLDVREWLLDAAPEEADGEEDYDHVPGLLLQASREPRERPA 299 Query: 230 MIINPNIVD--LLSFRYEDFTLRSYEPHAAILAKVS 263 + ++ D L +ED LR Y+P I V+ Sbjct: 300 L----DVADVPLEDLSFEDIVLRDYDPADGIRFAVA 331 >gi|291517888|emb|CBK73109.1| thymidylate synthase [Butyrivibrio fibrisolvens 16/4] Length = 283 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 21/276 (7%) Query: 7 LLRHVIKFGSDRRDR--------TG--VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 + R +++ G+D +D TG T FG ++DL + FP LT +K KS + Sbjct: 11 MCRDILENGTDTKDEIVRPTWQDTGEKAYTIKQFGVVNKYDLREEFPALTLRKTALKSCM 70 Query: 57 HELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 E+LW + +N+ L +WDEWAD++G +G YG ++ G +IDQ+ + Sbjct: 71 DEVLWIYQRKSNNIHDLK---PHVWDEWADENGSIGTAYGYVVGEKFEFKGEMIDQMDYV 127 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGD 169 ++ L+ PYSRR + + + + L PC + V K L+ L QRS D Sbjct: 128 LKQLKETPYSRRIMTNLYQFHDLATGHLDPCCYSATYNVTKDKNSDKLVLNMVLNQRSQD 187 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + +N+ Y++L MM+A V G+ IH + D H+Y+ H + L R P+ Sbjct: 188 ILAANNWNVCQYAILLMMVAQVNDMIPGQLIHVIADAHIYDRHVDAIKELLERPELPAPK 247 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 + +NP + + F +D + YE I ++V Sbjct: 248 VRLNPEVKNFYDFTTDDLIVEGYEAGEQIRNIPIAV 283 >gi|169835631|ref|ZP_02868819.1| Thymidylate synthase [candidate division TM7 single-cell isolate TM7a] Length = 205 Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 99/193 (51%), Positives = 127/193 (65%), Gaps = 10/193 (5%) Query: 82 EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK- 140 +A++ G+LGP+YGVQWR WPD G IDQI + + ++ +P SRR+IVSAWNVA ID Sbjct: 13 AFAEEWGDLGPVYGVQWRKWPDGKGGTIDQIQNAIDMIKNNPMSRRNIVSAWNVAEIDDI 72 Query: 141 ---MALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191 LPPCH +FQF V G KL L QRS D+FLG+PFNIASY+LL M+A V Sbjct: 73 ARAGGLPPCHTIFQFNVRPGENGEKDKLDLTLTQRSADIFLGVPFNIASYALLLSMIAQV 132 Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251 G Q GEF+HTL H+YNNH Q D QLSR P LP++ +NP+I ++ F +D L Sbjct: 133 TGKQPGEFVHTLNSAHIYNNHRVQVDEQLSRHPLPLPKLWLNPDIKNIDDFTIKDIRLEG 192 Query: 252 YEPHAAILAKVSV 264 YE H+ I A ++V Sbjct: 193 YESHSPIKAPIAV 205 >gi|255281701|ref|ZP_05346256.1| thymidylate synthase [Bryantella formatexigens DSM 14469] gi|255267768|gb|EET60973.1| thymidylate synthase [Bryantella formatexigens DSM 14469] Length = 281 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 17/274 (6%) Query: 6 DLLRHVIKFGSDRR--------DRTG--VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSV 55 + R +++ G+D R + TG T FG R+DL + FP LT +++ KS Sbjct: 10 ETCRDILENGTDTRGEKVRPRWEDTGEFAYTIKKFGVVNRYDLRREFPALTLRRIALKSA 69 Query: 56 VHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 + E+LW + SN +H IWD+WAD+ G +G YG R Y G DQ+ + Sbjct: 70 MDEILWIYQKKSN--NIHDLNSHIWDQWADESGSIGTCYGDVIRRKFLYKGEETDQMDYV 127 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK----LSCQLYQRSGDVF 171 ++ LR +PYSRR + + + + AL PC + V + L+ L QRS D+ Sbjct: 128 LRQLRENPYSRRIMTNMYQYEYLHSGALDPCCYSMTYNVTKTEEGLVLNAVLNQRSQDML 187 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 +N+A Y++L MM+A V GE +H + D H+Y+ H L+R P++ Sbjct: 188 AANGWNVAQYAILLMMVAQVNHMIPGELVHIIADAHIYDRHVPVIRELLTREEHPAPKVW 247 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 +NP + D +F D + YE I ++V Sbjct: 248 LNPEVTDFYAFTTADLHVEDYETGEQIKNIPIAV 281 >gi|161610414|gb|ABX74962.1| thymidylate synthase-like protein [Retroperitoneal fibromatosis-associated herpesvirus] Length = 170 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 80/163 (49%), Positives = 109/163 (66%) Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 DY G +DQ++ ++ ++ +P RR ++SAWN KMALPPCH L QFYV G+LSC Sbjct: 8 TDYSGRGVDQLAYLINLIKNNPCDRRMVMSAWNPVDTPKMALPPCHVLCQFYVAAGELSC 67 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QLYQRSGD+ LG+PFNIASY+LLT M+A V G + G+ IH LGD H+Y H + +QLS Sbjct: 68 QLYQRSGDMGLGVPFNIASYALLTYMIAHVCGLRPGDLIHVLGDAHIYKTHLDAVKVQLS 127 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R PR P++ I ++ + F +DF+L Y PH AI ++V Sbjct: 128 REPRPFPRLNIVRSVASIEEFTADDFSLDGYNPHPAIRMDMAV 170 >gi|218280886|ref|ZP_03487510.1| hypothetical protein EUBIFOR_00068 [Eubacterium biforme DSM 3989] gi|218217820|gb|EEC91358.1| hypothetical protein EUBIFOR_00068 [Eubacterium biforme DSM 3989] Length = 287 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 19/279 (6%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L + +++ G +RTG+ T D+SK FP+LTTK++ + V E+LW Sbjct: 8 YCGLCKDILENGVQVHNRTGIDTIKIPSAHFHLDVSKEFPILTTKQLFIRQAVTEMLWIY 67 Query: 64 RGDSN-VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDG------------NVI 109 + SN V +L V IWD+W ++DG+ D Sbjct: 68 QAQSNDVRWLQERNVHIWDKWEINEDGDWIDENTGNVLKHFDPSFAHTIGTAYGYIVKKY 127 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 D ++ ++ SL+ D RR ++S W + +D LP C ++ V +GKL+ ++QRS D Sbjct: 128 DLMNKLLNSLKNDKEDRRRVISLWQDSELDTAVLPSCVWSSEWDVTDGKLNIWVHQRSCD 187 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP----R 225 V LG+PFN+ Y++L MM+A V G + G ++ D H+Y N + QL+R Sbjct: 188 VPLGLPFNVTQYAVLLMMVAQVTGLKPGTIDWSIKDAHIYVNQVDGIKEQLNRYETKGSL 247 Query: 226 TLPQMIINPNIVDLLSFRY-EDFTLRSYEPHAAILAKVS 263 P++ +NP++ D F +D L YE I ++ Sbjct: 248 PAPELWLNPDVTDFYDFDPTKDVKLNGYEHMGKISFPLA 286 >gi|110668372|ref|YP_658183.1| thymidylate synthase [Haloquadratum walsbyi DSM 16790] gi|109626119|emb|CAJ52571.1| thymidylate synthase [Haloquadratum walsbyi DSM 16790] Length = 336 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 153/338 (45%), Gaps = 78/338 (23%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 MHQY DL+ V++ G + +RTGV T S+F +L GFPLLTTK + W S++ Sbjct: 1 MHQYRDLVTAVLRSGEHKPNRTGVDTISSFSQHYTINLRDGFPLLTTKDLSGSRWHSLLS 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102 E +W+L G+ ++ L SIWD WAD DG L YG WR +P Sbjct: 61 EFVWYLSGEEHIRSLREE-TSIWDAWADDDGRLETAYGRFWRRYPVPSTDSQLPGEAWPV 119 Query: 103 -----DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 D DQ++ ++ L+ +P SRR ++SAW+ A LPPCH F F V N Sbjct: 120 DDHRWRNDDGTFDQLAYAIEQLQENPQSRRIVISAWHPANAAISTLPPCHYTFVFNVQNN 179 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN------- 210 +L+ L QRSGD+ LG+PFNIA+YSLL ++A G F H++ D H+Y Sbjct: 180 RLNVHLTQRSGDIALGVPFNIAAYSLLATVIAQQTELTPGTFAHSIVDAHIYCGMGDRGA 239 Query: 211 ---------------------------------------------NHFEQADLQLSRSPR 225 +H Q +RSPR Sbjct: 240 WYGEGETLDSLRNRLEAVDNPSEYRDVRSWLLESAPSEPANQSGYDHIPGLLEQCARSPR 299 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 + PQ+ I+ V L E+ L Y+P AI V+ Sbjct: 300 SKPQVAIDD--VSLDDIGVENIHLSGYDPAPAIRFAVA 335 >gi|76802103|ref|YP_327111.1| thymidylate synthase [Natronomonas pharaonis DSM 2160] gi|76557968|emb|CAI49553.1| thymidylate synthase [Natronomonas pharaonis DSM 2160] Length = 342 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 110/344 (31%), Positives = 156/344 (45%), Gaps = 84/344 (24%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57 M QY DL+ V+ G+ + +RTGV T ++F + DL GFPLLTTK++ W S++H Sbjct: 1 MQQYHDLVSDVLAGGTHKPNRTGVDTIASFSHHYEVDLGAGFPLLTTKRMDGYRWNSLIH 60 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----------- 106 ELLW+L G+ ++ L IWD WAD +G L YG WR +P D Sbjct: 61 ELLWYLSGEEHIRTLREE-TKIWDAWADDEGHLDTAYGRFWRRFPVPDEPARLPGESWPD 119 Query: 107 -----------------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 V DQ++ ++ +L +P+SRR +V+AW+ A LPPCH Sbjct: 120 DSHRWTTTETTPDGTERQVFDQLAYVLDTLEENPHSRRLVVNAWHPANAAVSTLPPCHYT 179 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 F F V +L+ L QRSGD+ LG+PFN+A+YSLL +A+ F+ G F HT+ D H+Y Sbjct: 180 FVFNVQGDQLNVHLTQRSGDIALGVPFNLAAYSLLAHAVANRTAFEVGSFGHTIVDAHIY 239 Query: 210 --------------------------------------------------NNHFEQADLQ 219 +H Q Sbjct: 240 CGAGDRGAWYADKLPALQDRLNDIDDREEYVDVREWLESEAPAEADDEGGLDHVPGLLTQ 299 Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 LSRSPR P++ + L Y+D L Y+P I V+ Sbjct: 300 LSRSPRDRPEIEVADRP--LDDLEYDDVQLHDYDPAPGISFSVA 341 >gi|269468616|gb|EEZ80260.1| thymidylate synthase [uncultured SUP05 cluster bacterium] Length = 284 Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 20/284 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M Y+D+ + ++ G RTG T + G DLS G P++TTKK+ WK+ V E Sbjct: 1 MKTYIDIGKRILDEGEWVTNTRTGKKTLTIIGATFEHDLSDGTVPVITTKKLFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDY-D 105 +L ++RG + + G + W+ A+++ ++G YGV R++P D Sbjct: 61 MLGYIRGYRSAAQFRSIGCNTWNANANENQAWLDNPHRLGKDDMGLCYGVIGRAFPGIED 120 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 +DQ IV L RR I++ + LI + LP C F + L + YQ Sbjct: 121 DEPLDQYKKIVDDLSKGVDDRREILTFNHPNLIHRACLPACMHTHHFNLLGDNLYIESYQ 180 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSP 224 RS D LG PFN + L ++ A + G H L ++HLY + + Q+ R P Sbjct: 181 RSSDFALGQPFNHFQVAFLLLITAQITGKTPKTMRHHLSNIHLYEDQVDTFKNEQVEREP 240 Query: 225 RTLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 LP+ INP+I L +DF L YE H AI +V Sbjct: 241 MALPKFKINPDIKTLEDLETWVTMDDFELIDYEHHPAIKYPFTV 284 >gi|311992971|ref|YP_004009838.1| Td thymidylate synthetase [Acinetobacter phage Acj61] gi|295815260|gb|ADG36186.1| Td thymidylate synthetase [Acinetobacter phage Acj61] Length = 317 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 89/310 (28%), Positives = 137/310 (44%), Gaps = 47/310 (15%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M +Y LR +I G D DRTGVGT + FG ++D+S+ P+LT +KV WKS+V E+ Sbjct: 9 MREYDLALRDIIDNGFDIDGDRTGVGTVAKFGINTKYDISERVPVLTKRKVAWKSIVKEV 68 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK---------DGELGPIYGVQWRSWPD------- 103 LW++ G SN++ L G IW W K +G G +YG + Sbjct: 69 LWYISGSSNINDLEAMGAKIWTPWKSKEFETKHGFVEGSAGYVYGFNLIHFGADVKQVES 128 Query: 104 ---------------------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 +Q+ ++ +LRA+P SR+ + W ++ Sbjct: 129 RRLAEQNPFNNVDEHMLDKIYPKSKGFNQLDYVINTLRANPKSRQACFTFWRPDTNNQAI 188 Query: 143 LPPCHCLFQFYVDNGK------LSCQLYQRSGDVFLGIPF-NIASYSLLTMMLASVIGFQ 195 LP CH + F V + L+C L+QRS D +G+ NI + +L T M+A +G + Sbjct: 189 LPACHAFYSFIVSPDENGEMNVLNCHLFQRSADYPIGVGMGNIWTATLFTYMIAQQLGMK 248 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRT-LPQMIINPNIVDLLSFRYEDFTLRSYEP 254 G H+ H+Y N + L R P + +N + + EDF L Y P Sbjct: 249 PGHVYHSGAHCHVYKNAIDATVEYLEREDEPDSPILKLN-KRDSIYDYVPEDFELIDYNP 307 Query: 255 HAAILAKVSV 264 I ++V Sbjct: 308 LPPIKFDIAV 317 >gi|328955412|ref|YP_004372745.1| thymidylate synthase [Coriobacterium glomerans PW2] gi|328455736|gb|AEB06930.1| thymidylate synthase [Coriobacterium glomerans PW2] Length = 282 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 20/275 (7%) Query: 7 LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 + +++ G+ + D T +FG R+DL + FP LT ++ KS + Sbjct: 11 MCEDILENGTSTQGERVRPRWADGASAYTLKSFGVTARYDLREEFPALTLRRTALKSAMD 70 Query: 58 ELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 E+LW + +NV L IWD WAD+ G +G YG Q Y DQ+ ++ Sbjct: 71 EVLWIYQRKSNNVHDL---NSHIWDRWADESGSIGKAYGYQIAQLSRYPEGEFDQMDRVL 127 Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDV 170 L PYSRR + S + A + M L PC + V D L+ L QRS DV Sbjct: 128 YDLSHTPYSRRIMTSTYTFADLSDMHLYPCAYSCTYNVTRCPGDDALTLNMVLMQRSQDV 187 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 +N+ Y+LL MM+A V G GE +H + D H+Y+ H E + R P++ Sbjct: 188 LAANNWNVCQYALLLMMVAQVSGMIPGELLHVIADAHIYDRHVEIVRELIGRPRHPAPKV 247 Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 +NP++ D +F +D + Y I ++V Sbjct: 248 ALNPDVTDFYAFTTDDLLVCDYVHGPQIKDIPIAV 282 >gi|182682904|ref|YP_001837028.1| thymidylate synthase [Enterobacteria phage EPS7] gi|182630616|gb|ACB97548.1| thymidylate synthase [Enterobacteria phage EPS7] Length = 284 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 20/284 (7%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QY++ + +++ G + RTGV + F++ G PL+TT+K K + E Sbjct: 1 MKQYIETGKRILEEGVWVTNPRTGVRCLTIIDADFTFNVGAGELPLVTTRKAFAKQAIME 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 ++ +LRG + + GV+ W+ A+++ ++G +YGVQ R W + DG Sbjct: 61 MIGYLRGYDSAAQFRAIGVNTWNANANENIAWLGNPFRKGEDDMGRVYGVQGRHWTNSDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 V DQ++ + +L+ R I++ K L PC QF + L +QR Sbjct: 121 MVFDQLAKVYHNLKRGIDDRGEILTFGTRGEFRKGCLRPCMHTHQFSILGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSP 224 S D LG FN+ L ++A + G + G + ++H+Y + + Q R P Sbjct: 181 SNDFLLGQVFNMVQCYALLAIMAQITGLKPGIARQKIINLHIYEDQYNVLMEHKQFDREP 240 Query: 225 RTLPQMIINPNIVDLLS-FRY---EDFTLRSYEPHAAILAKVSV 264 P + INPNI L + +DFT+R YE H AI +V Sbjct: 241 FAPPTLEINPNIRTLDDVLTWVSKDDFTVRGYEHHPAIAYPFTV 284 >gi|237737848|ref|ZP_04568329.1| thymidylate synthase [Fusobacterium mortiferum ATCC 9817] gi|229419728|gb|EEO34775.1| thymidylate synthase [Fusobacterium mortiferum ATCC 9817] Length = 274 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54 Y D++ + K+G D T +S GYQ R D S L+TT+ K+ Sbjct: 8 YKDIVETIDKYGIWSEGNVRTKYADGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPNKA 67 Query: 55 VVHELLWFL-RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W +NV L++ WDEW +DG +G YG Q Q+ Sbjct: 68 PIRELYWIWIMQSNNVEELNKLKCKFWDEWKMEDGTIGKAYGYQ---IAKQTFGYKSQLD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 I+ ++ +P SRR + W +DKMAL PC L Q+ V KL ++ QRS DV LG Sbjct: 125 YIINEIKKNPNSRRIMTEIWVPEDLDKMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 184 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + + I ++ +VH+Y+ H Q+ R + I Sbjct: 185 LVANVFQYSVLHKLVAMECGLEPADIIWSIHNVHIYDRHMPVLLEQIKREEFEGAILKI- 243 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + +Y+ I +V++ Sbjct: 244 ENFTSIYDFKPDDVVVENYKYGDKISYEVAI 274 >gi|326632978|ref|YP_004306567.1| thymidylate synthase [Enterobacteria phage SPC35] gi|321272172|gb|ADW80064.1| thymidylate synthase [Enterobacteria phage SPC35] Length = 284 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 20/284 (7%) Query: 1 MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QY+++ + ++ G + RTGV + F++ G FPL+TT+K K + E Sbjct: 1 MDQYIEVGKRILSDGQWVTNPRTGVRCLTIVDADFTFNVGAGEFPLITTRKAFAKQAIME 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 ++ +LRG + + GV+ W+ A+++ ++G +YGVQ R W + DG Sbjct: 61 MIGYLRGYDSAAQFRAIGVNTWNANANENSAWLDNPYRKGEDDMGRVYGVQGRQWTNSDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + DQ++ I +L+ R I++ WN K L PC QF + L +QR Sbjct: 121 LMFDQLAKIYHNLKKGIDDRGEILTFWNPGEFSKGCLRPCMHTHQFSILGDTLYLNSFQR 180 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSP 224 S D LG FN+ L ++A + G + G + ++H+Y + + Q R P Sbjct: 181 SNDFLLGQVFNMVQCYTLLALMAQITGLKPGIARQKIINLHIYEDQYNVLMEHKQFDRKP 240 Query: 225 RTLPQMIINPNIVDLLS----FRYEDFTLRSYEPHAAILAKVSV 264 P + INPNI L +DFT+R YE H AI +V Sbjct: 241 FAPPTLEINPNIRTLEDVLTWVSKDDFTVRGYEHHPAIAYPFTV 284 >gi|262067846|ref|ZP_06027458.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693] gi|291378569|gb|EFE86087.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693] Length = 275 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 78/279 (27%), Positives = 132/279 (47%), Gaps = 19/279 (6%) Query: 1 MHQ-----YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLT 46 M + Y +++ + + G D T +S GYQ R D S LLT Sbjct: 1 MKKSFDEIYKNIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAFLLT 60 Query: 47 TKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD 105 T++ WKS + E+ W +NV+ L + G W+E+ KDG +G YG Q Sbjct: 61 TRQCPWKSAIKEIYWIWLLQSNNVNELEKLGCKFWNEFKLKDGTIGKSYGHQL---AKET 117 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165 Q+ ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ Q Sbjct: 118 FGYKSQLHYVINELKENPNSRRIMTEIWIPEELHEMALTPCVHLTQWSVIGNKLYLEVRQ 177 Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 RS DV LG+ N+ YS+L ++A G + E I + +VH+Y+ H+++ Q+ Sbjct: 178 RSCDVALGLVANVFQYSVLHKLVALECGLEPAEIIWNIHNVHIYDRHYDKLIKQVDGETF 237 Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++ IN N + F+ +D + +Y+ I ++++ Sbjct: 238 EPAKIKIN-NFKSIFDFKPDDIEVINYKYGEKINYEIAI 275 >gi|294644847|ref|ZP_06722587.1| thymidylate synthase [Bacteroides ovatus SD CC 2a] gi|292639785|gb|EFF58063.1| thymidylate synthase [Bacteroides ovatus SD CC 2a] Length = 151 Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 96/151 (63%), Positives = 121/151 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL V+ G+++ DRTG GT S FG+QMRF+L GFP LTTKK+H KS+++ELL Sbjct: 1 MKQYLDLLNRVLTEGTEKSDRTGTGTISIFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+NV YL HGV IW+EWAD++G+LG +YG QWRSWPDY+G IDQIS +V++L+ Sbjct: 61 WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETLK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151 +P SRR IVSAWNVA ++ M LPPCH FQ Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQ 151 >gi|15226577|ref|NP_179750.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative / DHFR-TS, putative [Arabidopsis thaliana] gi|4567234|gb|AAD23649.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana] gi|330252101|gb|AEC07195.1| bifunctional dihydrofolate reductase/thymidylate synthase [Arabidopsis thaliana] Length = 492 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 22/260 (8%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L++++I G + T S FG QMRF+L K FPLLTTKK+ W VV E+L + Sbjct: 238 YLNLVQNIISSGDMNDN----STLSKFGCQMRFNLRKTFPLLTTKKIFWLGVVEEILQLI 293 Query: 64 RGDSNVSYLHRHGVSIWDEWA-------------DKDGELGPIYGVQWRSWPDYDG-NVI 109 G +N +G IWD ++DG+ ++G+ W+ Sbjct: 294 SGSNNPK---ENGSHIWDTDEAKEYLDSFGVNATEEDGDNPFLHGLHWKHCDARFVIQEF 350 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 Q+S ++ ++ +P+ +R +++A N K+++ PCH QFYV NG++SCQ+YQ S + Sbjct: 351 SQLSDVINKIKNNPHDQRIMLAACNPLDF-KLSVSPCHTFTQFYVANGEVSCQIYQSSTE 409 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 +GIPF+IA+YSLLT ++A V G+FIH +G ++ H + QL SP+ P Sbjct: 410 ASIGIPFSIATYSLLTCIIAHVCDLGAGDFIHVIGQAYINKAHVKAIQKQLQISPKPFPI 469 Query: 230 MIINPNIVDLLSFRYEDFTL 249 + INP + +F D L Sbjct: 470 LKINPEKKKMDNFEASDLEL 489 >gi|302335591|ref|YP_003800798.1| thymidylate synthase [Olsenella uli DSM 7084] gi|301319431|gb|ADK67918.1| thymidylate synthase [Olsenella uli DSM 7084] Length = 282 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 18/274 (6%) Query: 7 LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 + +I+ G+ D T T FG R+DL + FP LT ++ +S + Sbjct: 11 MCTDIIERGTTTEGQRVRPHWEDGTPAYTIKQFGVCNRYDLREEFPALTLRRTALRSAMD 70 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 E+LW + SN +H IWDEWAD+ G +G YG Q Y +DQ+ ++ Sbjct: 71 EVLWIYQKKSN--NIHDLSSHIWDEWADESGSIGKAYGYQIAQKSHYPEGDMDQMDRVLF 128 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVF 171 LR++PYSRR + S + A + +M L PC + V + L+ L QRS D+ Sbjct: 129 DLRSNPYSRRIMTSTYTFADLSEMNLYPCAFNVIYNVTQTPGEERPSLNMLLVQRSQDIL 188 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 +N+ Y++L MM+A GE +H + D H+Y+ H + ++R P++ Sbjct: 189 AANNWNVCQYAILLMMVAQTNDMVAGELVHMISDAHIYDRHVDIVRELIARPTYPAPKVS 248 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264 + P++ D F +D + Y + ++V Sbjct: 249 LRPDVHDFYDFTTDDLIVCDYNHGPQVKDIPIAV 282 >gi|167751275|ref|ZP_02423402.1| hypothetical protein EUBSIR_02261 [Eubacterium siraeum DSM 15702] gi|167655782|gb|EDR99911.1| hypothetical protein EUBSIR_02261 [Eubacterium siraeum DSM 15702] gi|291556779|emb|CBL33896.1| thymidylate synthase [Eubacterium siraeum V10Sc8a] Length = 275 Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 126/259 (48%), Gaps = 14/259 (5%) Query: 8 LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 R +I+ GS D T T F R++L + FP++T ++++++S + E Sbjct: 12 CRDIIEHGSWDTNSEVRPRWEDGTPAHTVKKFCVVNRYNLQEEFPVMTLRRIYYRSAIEE 71 Query: 59 LLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 +LW + SN V+ L IWD WAD++G +G YG Q Y DQ+ ++ Sbjct: 72 ILWIYQKKSNRVADLS---THIWDSWADENGTIGKAYGWQLGQKSIYPEGEFDQVDKVLY 128 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 L +P SRR + + +N + +M L PC F V L+ L QRS D+ +N Sbjct: 129 DLSHNPASRRIMTNMYNHKDLHEMGLAPCAYSMTFNVTGDTLNAILNQRSQDMLTANNWN 188 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 + Y+ L +M A G + GE +H + D H+Y+ H + + + P P+M++ +I Sbjct: 189 VCQYAALLIMFAKASGLKAGELVHVIADAHIYDRHIDAVKRIIEKEPYPAPEMVV-EDIT 247 Query: 238 DLLSFRYEDFTLRSYEPHA 256 D F FTL+ Y+ H Sbjct: 248 DFYKFTKNSFTLKDYKYHD 266 >gi|291531667|emb|CBK97252.1| thymidylate synthase [Eubacterium siraeum 70/3] Length = 275 Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 126/259 (48%), Gaps = 14/259 (5%) Query: 8 LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 R +I+ GS D T T F R++L + FP++T ++++++S + E Sbjct: 12 CRDIIEHGSWDTNSEVRPRWEDGTPAHTVKKFCVVNRYNLQEEFPVMTLRRIYYRSAIEE 71 Query: 59 LLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 +LW + SN V+ L IWD WAD++G +G YG Q Y DQ+ ++ Sbjct: 72 ILWIYQKKSNRVADLS---THIWDSWADENGTIGKAYGWQLGQKSIYPEGEFDQVDRVLY 128 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 L +P SRR + + +N + +M L PC F V L+ L QRS D+ +N Sbjct: 129 DLSHNPASRRIMTNMYNHKDLHEMGLAPCAYSMTFNVTGDTLNAILNQRSQDMLTANNWN 188 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 + Y+ L +M A G + GE +H + D H+Y+ H + + + P P+M++ +I Sbjct: 189 VCQYAALLIMFAKASGLKAGELVHVIADAHIYDRHIDAVKRIIEKEPYPAPEMVV-EDIT 247 Query: 238 DLLSFRYEDFTLRSYEPHA 256 D F FTL+ Y+ H Sbjct: 248 DFYKFTKNSFTLKDYKYHD 266 >gi|18466784|ref|NP_569591.1| putative thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16506100|emb|CAD09986.1| putative thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] Length = 371 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 105/349 (30%), Positives = 152/349 (43%), Gaps = 88/349 (25%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 Y ++ V+ G DRTG GT+S + L+ G PL++ K V+ K ++ EL W+ Sbjct: 23 YAKVVETVLNSGVHAGDRTGTGTKSVSYVPSYYMLTGGSVPLISGKAVNLKPLLVELEWY 82 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----------------- 105 L+G N+ +L +GV IWD WAD++G+LGP+YG QWR W D Sbjct: 83 LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIDTFRER 142 Query: 106 -----------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 IDQ+ IV +LR +P RR +++AWNV ++ M LPPCH Sbjct: 143 GYKVEGYLGVSEDRVVLSREIDQLQRIVHTLRTNPTDRRILLNAWNVGELEDMKLPPCHF 202 Query: 149 LFQFY---------------------------------------------------VDNG 157 +F + + Sbjct: 203 VFSLWSRKLDFETRLTMATDIGIQHNRHGHESIYTQMLCLLERDGGITENLLDELGIPKR 262 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 L+ L QRS D F+G+PFNIA Y +LT LA + G G F+H DVHLY+NH + Sbjct: 263 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYDNHMGGVE 322 Query: 218 LQLSRSP--RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R P + P +I +L F++E + Y P I V+V Sbjct: 323 ELMKREPPKESDPVVIFPHEWAELDDFKWEGVQVCGYSPLPWIKVPVAV 371 >gi|19703585|ref|NP_603147.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|22096218|sp|Q8RGP6|TYSY_FUSNN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|19713687|gb|AAL94446.1| Thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 275 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54 Y D++ + + G D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKDIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W +NV L+ G WDEW +DG +G YG Q Q+ Sbjct: 69 PIRELYWIWILQSNNVDVLNELGCKFWDEWKMQDGTIGKAYGYQ---IAQETFGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELKKNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + E I + ++H+Y+ H+++ Q++R ++ IN Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + Y+ + +V++ Sbjct: 246 -NFKSIFDFKPDDIEIIDYKYGEKVSYEVAI 275 >gi|228904773|ref|ZP_04068827.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222] gi|228854787|gb|EEM99391.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222] Length = 306 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 30/283 (10%) Query: 6 DLLRHVI------KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 D L+ ++ + D + + T+ FG R+DLSK FP TT+ + K++ E+ Sbjct: 30 DTLKLILAQEWIPDNRAVWEDGSPIATKRIFGVVNRYDLSKEFPAPTTRPLPLKTIFDEV 89 Query: 60 LWFLRG-DSNVSYLHRHGVSIWDEWA-----------------DKDGELGPIYGVQWRSW 101 W R +NV+ + IW++WA +K G +G YG Q Sbjct: 90 DWIYRKRSNNVNDMRA---KIWNQWAFKKTRLRFSKTFPFVRLEKKGSIGEAYGYQV--- 143 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Q+ ++ L+ DP++RR ++ WNV +M LPPC QF+ D K + Sbjct: 144 AKPIFGYDNQMDYVLGELKRDPFTRRAVIEMWNVDDTGRMNLPPCAHHLQFWSDGKKTNL 203 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 L QRS D FN+ Y++L M+A IG + GE +H +GD H+YN H E A+ + Sbjct: 204 ILKQRSQDFVTANAFNVCEYAILLHMVARHIGQEVGELLHIIGDCHIYNKHLELAEELVK 263 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + INP D SF +DF L +Y+ H + +V+V Sbjct: 264 REPYAAPTLWINPEKTDFYSFTADDFRLENYDKHPQMKIEVAV 306 >gi|255019178|ref|ZP_05291304.1| thymidylate synthase [Listeria monocytogenes FSL F2-515] Length = 179 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 94/169 (55%), Positives = 121/169 (71%) Query: 81 DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 + +A+K GELG IYG QWR W G IDQ++ +++ ++ +P SRR IVSAWN I Sbjct: 11 EAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIVSAWNPEDIPN 70 Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A +G GEFI Sbjct: 71 MALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAREVGLDVGEFI 130 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 HT+GD HLYNNH EQ QLSR+P LP+++++ + F D +L Sbjct: 131 HTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISL 179 >gi|289812599|ref|ZP_06543228.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 144 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 84/144 (58%), Positives = 102/144 (70%) Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 DP SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIAS Sbjct: 1 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 60 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 Y+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L Sbjct: 61 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 120 Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264 +R++DF + Y+PH I A V++ Sbjct: 121 DYRFDDFEIEGYDPHPGIKAPVAI 144 >gi|75758390|ref|ZP_00738513.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74494116|gb|EAO57209.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 286 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 30/283 (10%) Query: 6 DLLRHVI------KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 D L+ ++ + D + + T+ FG R+DLSK FP TT+ + K++ E+ Sbjct: 10 DTLKLILAQEWIPDNRAVWEDGSPIATKRIFGVVNRYDLSKEFPAPTTRPLPLKTIFDEV 69 Query: 60 LWFLRG-DSNVSYLHRHGVSIWDEWA-----------------DKDGELGPIYGVQWRSW 101 W R +NV+ + IW++WA +K G +G YG Q Sbjct: 70 DWIYRKRSNNVNDMRA---KIWNQWAFKKTRLRFSKTFPFVRLEKKGSIGEAYGYQV--- 123 Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 +Q+ ++ L+ DP++RR ++ WNV +M LPPC QF+ D K + Sbjct: 124 AKPIFGYDNQMDYVLGELKRDPFTRRAVIEMWNVDDTGRMNLPPCAHHLQFWSDGKKTNL 183 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 L QRS D FN+ Y++L M+A IG + GE +H +GD H+YN H E A+ + Sbjct: 184 ILKQRSQDFVTANAFNVCEYAILLHMVARHIGQEVGELLHIIGDCHIYNKHLELAEELVK 243 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 R P P + INP D SF +DF L +Y+ H + +V+V Sbjct: 244 REPYAAPTLWINPEKTDFYSFTADDFRLENYDKHPQMKIEVAV 286 >gi|296327655|ref|ZP_06870198.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155245|gb|EFG96019.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 275 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54 Y D++ + + G D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKDIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W +NV L+ G W+EW +DG +G YG Q Q+ Sbjct: 69 PIRELYWIWILQSNNVDVLNELGCKFWNEWKMQDGTIGKAYGYQ---IAQETFGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELKKNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + E I + ++H+Y+ H+++ Q++R ++ IN Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + Y+ + +V++ Sbjct: 246 -NFKSIFDFKPDDIEIIDYKYGEKVSYEVAI 275 >gi|34763229|ref|ZP_00144192.1| Thymidylate synthase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741125|ref|ZP_04571606.1| thymidylate synthase [Fusobacterium sp. 4_1_13] gi|294784655|ref|ZP_06749944.1| thymidylate synthase [Fusobacterium sp. 3_1_27] gi|27887109|gb|EAA24217.1| Thymidylate synthase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430657|gb|EEO40869.1| thymidylate synthase [Fusobacterium sp. 4_1_13] gi|294487871|gb|EFG35230.1| thymidylate synthase [Fusobacterium sp. 3_1_27] Length = 275 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54 Y +++ + + G D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKNIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W +NV L + G WDEW +DG +G YG Q Q+ Sbjct: 69 PIRELYWIWILQSNNVDVLDKLGCKFWDEWKMQDGTIGKAYGYQ---IAKETFGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELKNNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + E I + ++H+Y+ H+++ Q++R ++ IN Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRKTFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + Y+ + +V++ Sbjct: 246 -NFKSIFDFKPDDIEIIDYKYGEKVSYEVAI 275 >gi|256846261|ref|ZP_05551718.1| thymidylate synthase [Fusobacterium sp. 3_1_36A2] gi|256718030|gb|EEU31586.1| thymidylate synthase [Fusobacterium sp. 3_1_36A2] Length = 275 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54 Y +++ + + G D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKNIVDTIAEKGIWSEGNVRTKYVDGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W +NV L + G WDEW +DG +G YG Q Q+ Sbjct: 69 PIRELYWIWILQSNNVDVLDKLGCKFWDEWKMQDGTIGKAYGYQ---IAKETFGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELKNNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + E I + ++H+Y+ H+++ Q++R ++ IN Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRKTFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + Y+ + +V++ Sbjct: 246 -NFKSIFDFKPDDIEIIDYKYGEKVSYEVAI 275 >gi|213416590|ref|ZP_03349734.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 142 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 83/142 (58%), Positives = 101/142 (71%) Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 P SRR IVSAWNV +DKMAL PCH FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+ Sbjct: 1 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 60 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I L + Sbjct: 61 LLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDY 120 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 R++DF + Y+PH I A V++ Sbjct: 121 RFDDFEIEGYDPHPGIKAPVAI 142 >gi|293411959|ref|ZP_06654684.1| thymidylate synthase [Escherichia coli B354] gi|220980066|emb|CAP72258.1| Thymidylate synthase (EC 2.1.1.45) (TS) (TSase) [Escherichia coli LF82] gi|291469514|gb|EFF12003.1| thymidylate synthase [Escherichia coli B354] Length = 367 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 107/349 (30%), Positives = 154/349 (44%), Gaps = 88/349 (25%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 Y ++ V+K G DRTG GT ST + L+ G PL++ K V+ K ++ EL W+ Sbjct: 19 YAKVIETVLKSGVQADDRTGTGTLSTCYVPSYYMLTGGTVPLISGKAVNLKPLLVELEWY 78 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----------------- 105 L+G N+ +L +GV IWD WAD++G+LGP+YG QWR W D Sbjct: 79 LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIATFRER 138 Query: 106 -----------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 IDQ+ IV +LR +P RR +++AWNV ++ M LPPCH Sbjct: 139 GYKVEGYLGISEDRVVLSREIDQLQRIVDTLRTNPTDRRIMLNAWNVGELEDMKLPPCHF 198 Query: 149 LFQFY---------------------------------------------------VDNG 157 +F + + Sbjct: 199 VFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLYDLEMDGSVTEAELDELGIPKR 258 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 L+ L QRS D F+G+PFNIA Y +LT LA + G G F+H DVHLYNNH E Sbjct: 259 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYNNHMEGVC 318 Query: 218 LQLSRS--PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R + P +I +L F++++ + Y+P I V+V Sbjct: 319 ELMKRQAPEHSDPVVIFPHEWSELDDFKWDEVLILGYDPLPWIKVPVAV 367 >gi|317062887|ref|ZP_07927372.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185] gi|313688563|gb|EFS25398.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185] Length = 276 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54 Y +++ + K G D T +S GYQ R D S L+TT+ K+ Sbjct: 10 YKEIVETIDKKGIWSEGNVRTKYADGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPSKA 69 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W SN V L++ WDEW +DG +G YG Q Q+ Sbjct: 70 PIRELYWIWIMQSNDVDELNKLKCKFWDEWKMEDGTIGKAYGYQ---IAKQTFGYRSQLD 126 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 +V+ L+ +P SRR + W +DKMAL PC L Q+ V KL ++ QRS DV LG Sbjct: 127 YVVEELKKNPNSRRIMTEIWVPEDLDKMALTPCVHLTQWSVIGSKLYLEVRQRSCDVALG 186 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + E I + +VH+Y+ H + Q+ R + I Sbjct: 187 LVANVFQYSILHKLVAMECGLEPAEIIWNIHNVHIYDRHMPELLEQIKRPSINGATVKI- 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + +Y+ I +V++ Sbjct: 246 ENFKSIYDFKPDDIVVETYQYGDKISYEVAI 276 >gi|257468630|ref|ZP_05632724.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185] Length = 274 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54 Y +++ + K G D T +S GYQ R D S L+TT+ K+ Sbjct: 8 YKEIVETIDKKGIWSEGNVRTKYADGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPSKA 67 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W SN V L++ WDEW +DG +G YG Q Q+ Sbjct: 68 PIRELYWIWIMQSNDVDELNKLKCKFWDEWKMEDGTIGKAYGYQ---IAKQTFGYRSQLD 124 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 +V+ L+ +P SRR + W +DKMAL PC L Q+ V KL ++ QRS DV LG Sbjct: 125 YVVEELKKNPNSRRIMTEIWVPEDLDKMALTPCVHLTQWSVIGSKLYLEVRQRSCDVALG 184 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + E I + +VH+Y+ H + Q+ R + I Sbjct: 185 LVANVFQYSILHKLVAMECGLEPAEIIWNIHNVHIYDRHMPELLEQIKRPSINGATVKI- 243 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + +Y+ I +V++ Sbjct: 244 ENFKSIYDFKPDDIVVETYQYGDKISYEVAI 274 >gi|256028293|ref|ZP_05442127.1| thymidylate synthase [Fusobacterium sp. D11] gi|289766222|ref|ZP_06525600.1| thymidylate synthase [Fusobacterium sp. D11] gi|289717777|gb|EFD81789.1| thymidylate synthase [Fusobacterium sp. D11] Length = 275 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54 Y +++ + + G + D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKNIVDTIAEKGIWSKGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W +NV L + G WDEW +DG +G YG Q Q+ Sbjct: 69 PIRELYWIWILQSNNVDILDKLGCKFWDEWKMQDGTIGKAYGYQ---IAKETFGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELKNNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + E I + ++H+Y+ H+++ Q++R ++ IN Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + Y+ + +V++ Sbjct: 246 -NFKSIFDFKPDDVEILDYKYGEKVSYEVAI 275 >gi|296417089|ref|XP_002838196.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634113|emb|CAZ82387.1| unnamed protein product [Tuber melanosporum] Length = 293 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 89/281 (31%), Positives = 132/281 (46%), Gaps = 21/281 (7%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG--FPLLTTKKVHWKSVVHEL 59 + YLDL+R+++ G R D+ GT S F + P+L+TK V K +++EL Sbjct: 16 YHYLDLVRNMLTNGEQRPDKRRAGTTSLFATPTAPPQPEKPHTPVLSTKHVFQKVILYEL 75 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDGN 107 WF+ G +N + G I + + +LGP+YG Q R Sbjct: 76 FWFISGSTNNVPVSAVGAKILEGDGSRAYLDCIGLTERAQRDLGPVYGFQLRHIG---AK 132 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK----LSCQL 163 +D + H+ + + D +A C F +GK L C L Sbjct: 133 YVDCHMGYPVQCKHHLRPHHHVRMESDRSGEDGVAAVSHVCQFYVLYKDGKGEGALCCVL 192 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRS D+ LG+PFNIAS LLT+M+A V G + GEF T+GD + Y + + +QL R+ Sbjct: 193 YQRSCDMGLGVPFNIASSRLLTIMIAHVCGLEPGEFRDTMGDENGYADREDTLKVQLERA 252 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR LP IN + D+ F+ EDF ++PH I +V Sbjct: 253 PRELPTAKINRQVDDIDDFKSEDFKRVGHDPHPGIKMNPAV 293 >gi|323934213|gb|EGB30637.1| thymidylate synthase [Escherichia coli E1520] Length = 363 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 107/349 (30%), Positives = 154/349 (44%), Gaps = 88/349 (25%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 Y ++ V+K G DRTG GT ST + L+ G PL++ K V+ K ++ EL W+ Sbjct: 15 YAKVIETVLKSGVQADDRTGTGTLSTCYVPSYYMLTGGTVPLISGKAVNLKPLLVELEWY 74 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----------------- 105 L+G N+ +L +GV IWD WAD++G+LGP+YG QWR W D Sbjct: 75 LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIATFRER 134 Query: 106 -----------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 IDQ+ IV +LR +P RR +++AWNV ++ M LPPCH Sbjct: 135 GYKVEGYLGISEDRVVLSREIDQLQRIVDTLRTNPTDRRIMLNAWNVGELEDMKLPPCHF 194 Query: 149 LFQFY---------------------------------------------------VDNG 157 +F + + Sbjct: 195 VFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLYDLEMDGSVTEAELDELGIPKR 254 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 L+ L QRS D F+G+PFNIA Y +LT LA + G G F+H DVHLYNNH E Sbjct: 255 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYNNHMEGVC 314 Query: 218 LQLSRS--PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R + P +I +L F++++ + Y+P I V+V Sbjct: 315 ELMKRQAPEHSDPVVIFPHEWSELDDFKWDEVLILGYDPLPWIKVPVAV 363 >gi|291244011|ref|XP_002741893.1| PREDICTED: thymidylate synthase-like [Saccoglossus kowalevskii] Length = 207 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 85/251 (33%), Positives = 121/251 (48%), Gaps = 69/251 (27%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD-------- 85 +RFD+ FPLLTTK+V W+ V EL+WF++G +N L V IWD Sbjct: 6 LRFDMPDQFPLLTTKRVFWRGVAEELIWFIKGSTNAKELSDKNVHIWDANGSREFLDSRG 65 Query: 86 ----KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 ++G+LGP+YG QWR + DY IDQ+++++++++ +P+ RR I++AW Sbjct: 66 LQEREEGDLGPVYGFQWRHFGAQYKDMHSDYSNQGIDQLANVIETIKTNPHDRRIIMTAW 125 Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193 N + KMALPPCH QFYV N +LSCQLYQRS D+ Sbjct: 126 NPTDLPKMALPPCHAFVQFYVCNDELSCQLYQRSADMIQR-------------------- 165 Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253 +PR P++ I I ++ FRYEDF L Y Sbjct: 166 -----------------------------TPRPFPKLHIKRKIENIDDFRYEDFELEGYS 196 Query: 254 PHAAILAKVSV 264 PH I ++V Sbjct: 197 PHPKIPMDMAV 207 >gi|6681717|gb|AAF23264.1|AF124982_1 thymidylate synthase [Haloferax volcanii] Length = 342 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 105/331 (31%), Positives = 149/331 (45%), Gaps = 78/331 (23%) Query: 6 DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVHELLWF 62 DL+ V G + +RTGV T S F DL +GFPLLTTK + W S++HELLW+ Sbjct: 16 DLVTDVFGTGRHKPNRTGVDTISGFSKHYTVDLQEGFPLLTTKDLSGFRWNSLIHELLWY 75 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP------------------DY 104 G+ ++ L IWD WAD++G L YG WR +P Sbjct: 76 FSGEEHIRTLREE-TGIWDAWADEEGHLDTAYGRFWRRYPVPEEGLAGEAWPDDGHRWMN 134 Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164 D DQ++ ++ +L +P SRR +++AW+ A LPPCH F F V +L+ L Sbjct: 135 DEGTFDQLAYVLDTLDENPNSRRLVINAWHPANAAVSTLPPCHYTFVFNVQGDELNLHLT 194 Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN-------------- 210 QRSGD+ LG+PFN+A+Y++L ++A GF+ G F HT+ D H+Y Sbjct: 195 QRSGDIALGVPFNLAAYAILAQVVAQRAGFELGSFAHTIVDAHVYCGAGERGAWYGDHLD 254 Query: 211 ------------------------------------NHFEQADLQLSRSPRTLPQMIINP 234 +H LQ SR PR P + Sbjct: 255 ELQSRLADVQSPDEYLDVREWLLDAAPEEADGEEDYDHVPGLLLQASREPRERPAL---- 310 Query: 235 NIVD--LLSFRYEDFTLRSYEPHAAILAKVS 263 ++ D L +ED LR Y+P I V+ Sbjct: 311 DVADVPLEDLSFEDIVLRDYDPADGIRFAVA 341 >gi|260495617|ref|ZP_05815741.1| thymidylate synthase [Fusobacterium sp. 3_1_33] gi|260196800|gb|EEW94323.1| thymidylate synthase [Fusobacterium sp. 3_1_33] Length = 275 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54 Y D++ + + G + D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKDIVDTIAEKGIWSKGNVRTKYADGTAAYYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W ++V L + G WDEW +DG +G YG Q Q+ Sbjct: 69 PIRELYWIWILQSNDVDVLDKLGCKFWDEWKMQDGTIGKAYGYQ---IAQETFGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELKNNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + E I + ++H+Y+ H+++ Q++R ++ IN Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + Y+ + +V++ Sbjct: 246 -NFKSIFDFKPDDVEILDYKYGEKVSYEVAI 275 >gi|237745327|ref|ZP_04575808.1| thymidylate synthase [Fusobacterium sp. 7_1] gi|229432556|gb|EEO42768.1| thymidylate synthase [Fusobacterium sp. 7_1] Length = 275 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 129/271 (47%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54 Y +++ + + G + D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKNIVDTIAEKGIWSKGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W ++V L + G WDEW +DG +G YG Q Q+ Sbjct: 69 PIRELYWIWILQSNDVDVLDKLGCKFWDEWKMQDGTIGKAYGYQ---IAQETFGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELKNNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + E I + ++H+Y+ H+++ Q++R ++ IN Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + +Y + +V++ Sbjct: 246 -NFKSIFDFKPDDIEIINYRYGEKVSYEVAI 275 >gi|254302644|ref|ZP_04970002.1| thymidylate synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322836|gb|EDK88086.1| thymidylate synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 275 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54 Y D++ + + G D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKDIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W +NV L + G WDEW +DG +G YG Q Q+ Sbjct: 69 PIRELYWIWILQSNNVDVLDKLGCKFWDEWKMQDGTIGKAYGYQ---IAQETFGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELKKNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A G + E I + +VH+Y+ H+++ Q++ ++ IN Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNVHIYDRHYDKLIKQVNGETFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + Y+ + +V++ Sbjct: 246 -NFKSIFDFKPDDIEILDYKYGEKVSYEVAI 275 >gi|253582886|ref|ZP_04860104.1| thymidylate synthase [Fusobacterium varium ATCC 27725] gi|251835092|gb|EES63635.1| thymidylate synthase [Fusobacterium varium ATCC 27725] Length = 276 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 122/271 (45%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54 Y +++ + K G D T +S GYQ R D S L+TT+ K+ Sbjct: 10 YKEIVEIIDKNGIWSEGNVRTKYADGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPNKA 69 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W SN V L++ WDEW DG +G YG Q Q+ Sbjct: 70 PIRELYWIWIMQSNDVDELNKLKCKFWDEWKMNDGTIGKAYGYQ---IAKQTFGYKSQLD 126 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W +DKMAL PC L Q+ V KL ++ QRS DV LG Sbjct: 127 YVIGELKKNPNSRRIMTEIWVPEDLDKMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 186 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ YS+L ++A + E I + +VH+Y+ H Q+ R + I Sbjct: 187 LVANVFQYSILHKLVAMECNLEPAEIIWNIHNVHIYDRHMPDLLEQIKRPSIDGATVKI- 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + +Y+ I +V++ Sbjct: 246 ENFKSIYDFKPDDVVVENYQYGEKISYEVAI 276 >gi|332975724|gb|EGK12607.1| thymidylate synthase [Psychrobacter sp. 1501(2011)] Length = 211 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 104/190 (54%), Positives = 135/190 (71%), Gaps = 16/190 (8%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL+R+V G+++ DRTG GTRS FG Q+RFDLS GFPLLTTKKVH KS+ +EL WFL Sbjct: 11 YLDLIRYVRDHGTEKGDRTGTGTRSHFGAQLRFDLSDGFPLLTTKKVHMKSITYELFWFL 70 Query: 64 RGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSW-------PDYDGN 107 +GD++V YL +GV IW+EW+ +GELGPIYG QWR++ Y+ + Sbjct: 71 KGDTHVKYLQDNGVRIWNEWSTAEQTARFGRPEGELGPIYGHQWRNYGASKKPDGSYNQD 130 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQI +++ ++ +P SRR IVS WN A ++ALPPCH LFQF+V +GKLSCQLYQRS Sbjct: 131 GVDQIVEVIEQIKNNPNSRRLIVSGWNPAEATQVALPPCHTLFQFFVADGKLSCQLYQRS 190 Query: 168 GDVFLGIPFN 177 D+FL P N Sbjct: 191 ADLFLLYPHN 200 >gi|329939291|ref|ZP_08288627.1| Thymidylate synthase [Streptomyces griseoaurantiacus M045] gi|329301520|gb|EGG45414.1| Thymidylate synthase [Streptomyces griseoaurantiacus M045] Length = 298 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 89/285 (31%), Positives = 131/285 (45%), Gaps = 23/285 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV--HWKSVVHEL 59 QY +L +++ G R G + M FDL+ GFP++T + + W+ + EL Sbjct: 13 EQYRRILGAILESGIPVPTRQGPEALTLMQQTMSFDLANGFPVITERSLARFWRKPIGEL 72 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK---------DGELGP-IYGVQWRSWPDYDGNVI 109 F+ G + L G W WA + G+LGP YG + +P +G Sbjct: 73 CAFINGARTLDALAEFGCDWWGPWASEGKTSRRGLPPGDLGPGSYGGAFHDFPTAEGPGF 132 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNV-------ALIDKMALPPCHCLFQFYVDNGKLSCQ 162 DQ +V+ LR P R H VS W K + PCH V GKL Sbjct: 133 DQFRHLVEQLRELPGDRTHFVSPWIPQYQVRGEGKTPKTTISPCHGWVHVRVLGGKLHLH 192 Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 ++QRSGDV +G+P N+ Y+ L +ML + G + HT+ D H+Y + ++ L R Sbjct: 193 MFQRSGDVPVGVPSNMIQYAALLLMLEHLTGIPAARYYHTISDAHVYADQVDRVRGMLDR 252 Query: 223 SPRTLPQMIIN---PNIVDLLSFRYEDFTLRSYEPHAAI-LAKVS 263 PR LP + +N + D+ FR E F L Y+PH AI V+ Sbjct: 253 EPRRLPTVTLNESGRRVKDIHDFRPEHFDLADYDPHPAIGSIPVA 297 >gi|304415491|ref|ZP_07396130.1| thymidylate synthase [Candidatus Regiella insecticola LSR1] gi|304282650|gb|EFL91174.1| thymidylate synthase [Candidatus Regiella insecticola LSR1] Length = 155 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 83/155 (53%), Positives = 115/155 (74%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL L++ V++ G+ ++DRTG GT S FG+QMRF+L GFPL+TTK+ + K+++HELL Sbjct: 1 MQQYLALMKKVLEEGTTKKDRTGTGTLSIFGHQMRFNLQNGFPLVTTKRCYTKAIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YL + V+IW+EW D+ G+LGP+YG QWRSW DG IDQ+ +V ++ Sbjct: 61 WFLKGDTNIAYLKENDVTIWNEWVDEQGDLGPVYGKQWRSWGTADGRHIDQLDLLVNEIK 120 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD 155 +P SRR +VSAWNV +DKMAL PCH F Sbjct: 121 KNPDSRRLVVSAWNVGELDKMALAPCHAFFSILCR 155 >gi|262067031|ref|ZP_06026643.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693] gi|291379240|gb|EFE86758.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693] Length = 275 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54 Y +++ + + G D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKEIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSGDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W +NV+ L+ G WDEW +DG +G YG Q Q+ Sbjct: 69 PIRELYWIWILQSNNVNILNDLGCKFWDEWKQEDGTIGKAYGYQ---IAQETYGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELKKNPNSRRIMTEIWVPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ Y++L ++A G + + I + ++H+Y+ H+++ Q++ ++ IN Sbjct: 186 LVANVFQYAVLHKLVALECGLEAADIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + Y+ + +V++ Sbjct: 246 -NFKSIFDFKPDDVEIVDYKYGEKVSYEVAI 275 >gi|237739981|ref|ZP_04570462.1| thymidylate synthase [Fusobacterium sp. 2_1_31] gi|229421998|gb|EEO37045.1| thymidylate synthase [Fusobacterium sp. 2_1_31] Length = 275 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54 Y +++ + + G D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKEIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W +NV+ L+ G WDEW +DG +G YG Q Q+ Sbjct: 69 AIRELYWIWILQSNNVNVLNDLGCKFWDEWKQEDGTIGKAYGYQ---IAQETYGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ LR +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELRKNPNSRRIMTEIWVPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ Y++L ++A G + + I + ++H+Y+ H+++ Q++ ++ IN Sbjct: 186 LVANVFQYAVLHKLVALECGLEAADIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + Y+ + +V++ Sbjct: 246 -NFKSIFDFKPDDVEIVDYKYGEKVNYEVAI 275 >gi|294782923|ref|ZP_06748249.1| thymidylate synthase [Fusobacterium sp. 1_1_41FAA] gi|294481564|gb|EFG29339.1| thymidylate synthase [Fusobacterium sp. 1_1_41FAA] Length = 275 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 14/271 (5%) Query: 4 YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54 Y +++ + + G D T +S GYQ R D S L+T++ K+ Sbjct: 9 YKEIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSGDEAHLITSRFAPSKA 68 Query: 55 VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + EL W +NV L+ G WDEW +DG +G YG Q Q+ Sbjct: 69 AIRELYWIWILQSNNVDVLNDLGCKFWDEWKQEDGTIGKAYGYQ---IAQETYGQKSQLH 125 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++ L+ +P SRR + W + +MAL PC L Q+ V KL ++ QRS DV LG Sbjct: 126 YVINELKKNPNSRRIMTEIWVPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 + N+ Y++L ++A G + + I + ++H+Y+ H+++ Q++ ++ IN Sbjct: 186 LVANVFQYAVLHKLVALECGLEAADIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN 245 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 N + F+ +D + Y+ + +V++ Sbjct: 246 -NFKSIFDFKPDDVEIVDYKYGEKVNYEVAI 275 >gi|255025022|ref|ZP_05297008.1| thymidylate synthase [Listeria monocytogenes FSL J1-208] Length = 159 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 89/159 (55%), Positives = 113/159 (71%) Query: 91 GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150 G IYG QWR W G IDQ++ +++ ++ +P SRR IVSAWN I MALPPCH LF Sbjct: 1 GNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLF 60 Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210 QFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A +G GEFIHT+GD HLYN Sbjct: 61 QFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAREVGLDVGEFIHTMGDAHLYN 120 Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 NH EQ QLSR+P LP+++++ + F D +L Sbjct: 121 NHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISL 159 >gi|153840318|ref|ZP_01992985.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810] gi|149746021|gb|EDM57151.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810] Length = 255 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 77/243 (31%), Positives = 111/243 (45%), Gaps = 17/243 (6%) Query: 39 SKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD------------K 86 + FPL+TT+K WK+ V ELL ++RG N + G WD A+ Sbjct: 13 NNQFPLVTTRKSFWKAAVAELLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKG 72 Query: 87 DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 + ++G +YGVQ R+W DG IDQ+ IV L R I++ +N L PC Sbjct: 73 EDDMGRVYGVQGRAWAKPDGGHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPC 132 Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206 F + + L QRS DV LG+ FN+ + ++A + G + G+ H + + Sbjct: 133 MYSHHFSLLDDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNA 192 Query: 207 HLYNNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAK 261 H+Y + E D+QL R P P INP I L +DF + YE H I Sbjct: 193 HIYEDQLELMRDVQLKREPLQAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYP 252 Query: 262 VSV 264 SV Sbjct: 253 FSV 255 >gi|294917252|ref|XP_002778435.1| dihydrofolate reductase/thymidilate synthase, putative [Perkinsus marinus ATCC 50983] gi|239886828|gb|EER10230.1| dihydrofolate reductase/thymidilate synthase, putative [Perkinsus marinus ATCC 50983] Length = 422 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 92/203 (45%), Positives = 126/203 (62%), Gaps = 23/203 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 ++YL L+ +I+ G D DRTGVGT++ F MRF L G FPLLTTK+V W+ VV ELL Sbjct: 207 YEYLRLIEEIIENGEDADDRTGVGTKTIFSCHMRFSLRDGVFPLLTTKRVFWRGVVEELL 266 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWPDY---- 104 WF+RGD+N +L GV IWD ++G+LGP+YG QWR + Sbjct: 267 WFIRGDTNAKHLSDQGVKIWDLNGTREFLDGRGLTHREEGDLGPVYGFQWRHFGADYVDM 326 Query: 105 -----DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGK 158 +DQ++ +++ L+ +P RR I++AWN + MALPPCH + QFYV+ + Sbjct: 327 HADYSQSGGVDQLAEVIRQLKENPMDRRIIMTAWNPTALPLMALPPCHMMCQFYVNSKQE 386 Query: 159 LSCQLYQRSGDVFLGIPFNIASY 181 LSC +YQRS D+ LG+PFNIASY Sbjct: 387 LSCAMYQRSADMGLGVPFNIASY 409 >gi|4378161|gb|AAD19406.1| thymidylate synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 261 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 140/267 (52%), Gaps = 41/267 (15%) Query: 33 QMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWA------- 84 MRFDLSKG P+LTTKKV ++ + E+LWFL GD+N+ L GVSIW +W Sbjct: 1 MMRFDLSKGRIPILTTKKVSYRLAIREMLWFLSGDTNIRPLVEQGVSIWSDWPLARYQAE 60 Query: 85 ---------------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 K G+LGP+YG QWR W DG V DQI++++++L+++P Sbjct: 61 TGALLSKKEFEAKILADTEFAKKWGDLGPVYGRQWRRWQGSDGQVYDQIATLIETLKSNP 120 Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYS 182 SRR + WNVA + MALPPCH ++Q++V +G+L+ LYQRS DVFLG F Sbjct: 121 SSRRMLFHGWNVAELKDMALPPCHMVYQYHVTSDGRLNSLLYQRSADVFLGAAFQFGRRG 180 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 L MLA G G+ + T GDVH+Y NH +Q L ++ + + + + Sbjct: 181 RLQAMLADQAGLALGDLVWTGGDVHIYRNHIDQMKNSLP-VTSGFSRLELTRHPNSITDY 239 Query: 243 R-----YEDFTLRSYEPHAAILAKVSV 264 + +D L I V+V Sbjct: 240 KSRILRLQDMILI-----PPIKGAVAV 261 >gi|297821349|ref|XP_002878557.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297324396|gb|EFH54816.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 490 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 138/262 (52%), Gaps = 22/262 (8%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL+L++++I G + T + FG QMRF+L K FPLLTTKKV W VV E+L + Sbjct: 236 YLNLIQNIISSGDMNDN----NTLTKFGCQMRFNLRKTFPLLTTKKVFWLGVVEEILQLI 291 Query: 64 RGDSNVSYLHRHGVSIWD-------------EWADKDGELGPIYGVQWRSW-PDYDGNVI 109 G N G +IWD ++DG+ +YG+QW+ Sbjct: 292 SGSINP---MEKGSNIWDSDEANEYLNSFGVNATEEDGDHQHLYGLQWKHTDARLIVQKF 348 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 Q+S ++ ++ +P+++R ++SA N + + K+++ PC QFYV NG+LS Q+YQ S + Sbjct: 349 SQLSDVINKIKNNPHNQRIMLSACNPSDL-KLSVSPCQTFAQFYVANGELSSQIYQSSTE 407 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + IPF+I +YSLLT ++A V G+FI+ +G + + QL SP+ P Sbjct: 408 ASIEIPFSITTYSLLTCIIAHVCDLVAGDFIYVIGQARINKARVKAIQKQLQISPKPFPI 467 Query: 230 MIINPNIVDLLSFRYEDFTLRS 251 + INP + +F D L Sbjct: 468 LKINPEKKKMDNFEASDLELLG 489 >gi|124262681|ref|YP_001023151.1| thymidylate synthase [Methylibium petroleiphilum PM1] gi|124261927|gb|ABM96916.1| thymidylate synthase [Methylibium petroleiphilum PM1] Length = 316 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 136/316 (43%), Gaps = 56/316 (17%) Query: 1 MHQYLDLLRHVIKFGSDR-RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59 M Q+ D+L+H++ GS + RTG GY +RFD++ GFP +TTK++ +K EL Sbjct: 1 MQQFHDMLQHILDHGSRQLNARTGEEVLFVPGYTLRFDMADGFPAITTKQLFFKMAKGEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG- 106 F RG ++ + G ++W++ A+K + +LG +QW W D+ Sbjct: 61 FGFFRGFTSAAQFREIGCTVWNDNANKTKAWLANPYRQGEDDLGRFGYLQWTDWRDWREA 120 Query: 107 -----------------------------NVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 I+Q+ + + ++ +P R I+S WN A Sbjct: 121 TTPAQRDEMLAQGYEVRAHDAERGVWILRRSINQLETSLHAVMTNPSDRGIILSGWNPAE 180 Query: 138 IDKMALPPCH--CLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 ID+ AL CH + Q V G L L+QRS D L +N+A ++ ++A + G + Sbjct: 181 IDQGALRSCHVSYMLQVDVATGTLHLTLWQRSFDAPLA--YNVAIGAMYLEIMARLAGLK 238 Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP--------NIVDLL-SFRYED 246 G F H + D H+Y H L+R P + + I + + Sbjct: 239 AGTFTHFISDAHIYAKHIPGVKEMLAREHFPQPTLDLGNIPTLTSAAEIPGIFATLDPNQ 298 Query: 247 FTLRSYEPHAAILAKV 262 L +Y+ H I ++ Sbjct: 299 VKLVNYQHHPKIAFEM 314 >gi|330004215|ref|ZP_08304841.1| thymidylate synthase [Klebsiella sp. MS 92-3] gi|328536732|gb|EGF63053.1| thymidylate synthase [Klebsiella sp. MS 92-3] Length = 363 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 102/349 (29%), Positives = 144/349 (41%), Gaps = 88/349 (25%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLWF 62 Y +L G +RTG T T ++ L PL+++K V+ K ++ EL W+ Sbjct: 15 YACVLAEAASSGIKSDNRTGTPTIGTCYVNSQYPLWGAAVPLISSKAVNLKPLLVELEWY 74 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----------------- 105 L+G +V++L H V IW+ W +DG LGP+YG QWR W D Sbjct: 75 LKGTGDVAFLREHDVKIWEAWTREDGTLGPVYGKQWRRWNDTRIVDRYDFVKNYQSYLYR 134 Query: 106 -----------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 IDQ+ IV LR DP RR ++SAWNV ++ MALPPCH Sbjct: 135 GYKTEGYIGVEEDRVVLSREIDQLQRIVDKLRRDPTDRRIMMSAWNVGELEDMALPPCHF 194 Query: 149 LFQFY------------------VDNGKLSCQLY-------------------------- 164 ++ + V L Y Sbjct: 195 MYHVWSRELGFEERLRQANAIGEVHAKYLHESRYTALLAEIARCGEASEEMLDSLNIPRR 254 Query: 165 -------QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 QRS DVF+G+PFNIA Y +LT ++A V F H DVH+Y NH + Sbjct: 255 ALCSAMIQRSVDVFVGMPFNIAGYGILTSLIAQVTNHMPMMFSHFGLDVHVYENHMSGVN 314 Query: 218 LQLSRS-PRTLPQMIINPN-IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + R P ++I P ++ FR++D + Y PH I V+V Sbjct: 315 EMMDRDIPENSDPVVIFPESWKEIDDFRWQDVRIEGYAPHPWIKVPVAV 363 >gi|158079499|ref|YP_001504312.1| putative thymidylate synthase [Enterococcus phage phiEF24C] gi|157890343|dbj|BAF81471.1| putative thymidylate synthase [Enterococcus phage phiEF24C] Length = 315 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 82/309 (26%), Positives = 135/309 (43%), Gaps = 48/309 (15%) Query: 4 YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 Y DL+ +IK G D T T+ G G PLL +K V K Sbjct: 7 YKDLVMDIIKNGVTELPEGTRAVYADGTPATTKFIEGVNFTITPDMGAPLLRSKHVGIKW 66 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY--------- 104 + EL W + SN VS+L GV+IWDEW +DG +G YG + + Sbjct: 67 ALTELQWIWQEMSNEVSWLKERGVTIWDEWEQEDGTIGKAYGYALFNKERFIPVYSGDVE 126 Query: 105 -----------------DGNVI----------DQISSIVQSLRADPYSRRHIVSAWNVAL 137 G I +Q+ ++++ L++ P SRR + + WNV Sbjct: 127 LAKNRKAGSLIPKVVPKKGGWIAGTHQPYLKLNQVEAVIEQLKSTPNSRRIMTTLWNVED 186 Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197 + M+L PC + V GKL+ + RS DV LG+PFNI Y L +++A+ +G + G Sbjct: 187 LYDMSLEPCVWTTHWTVVEGKLNLHVKARSSDVCLGLPFNIIQYHALQLVMANTVGLELG 246 Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRS-PRTLPQMIIN-PNIVDLLSFRYEDFTLRSYEPH 255 T + H+Y H E + Q++ P +P++++ + D ++ +Y+ + Sbjct: 247 NLYWTSDNAHIYERHLELVEKQVNEPIPEEVPKLVLPWKKGTNFFDSPLSDISVINYKHN 306 Query: 256 AAILAKVSV 264 +V++ Sbjct: 307 GKFNYEVAI 315 >gi|225377246|ref|ZP_03754467.1| hypothetical protein ROSEINA2194_02892 [Roseburia inulinivorans DSM 16841] gi|225210950|gb|EEG93304.1| hypothetical protein ROSEINA2194_02892 [Roseburia inulinivorans DSM 16841] Length = 265 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 23/258 (8%) Query: 6 DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 D+ + +++ G+ D T T FG R+DLSK FP +T +K K+ Sbjct: 10 DMCKDILENGTSTEGEKVRPHWEDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTAIKTCT 69 Query: 57 HELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 E+LW + +N+ L ++WDEWAD+DG +G YG Q Y ++DQ+ + Sbjct: 70 EEMLWIWQRKSNNIHDL---NSTVWDEWADEDGSIGKAYGYQLGVKHQYKEGMMDQVDRV 126 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGD 169 + L+ +P+SRR + + + + +M L PC F V + + L+ L QRS D Sbjct: 127 IYDLKHNPFSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTHKEGDEKLTLNAILNQRSQD 186 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 V +N+ Y++L MLA V Q GE +H + D H+Y+ H + R + Sbjct: 187 VLAANNWNVCQYAVLMHMLAQVCDMQVGELVHVIADAHIYDRHIPIIKELIGREASGA-K 245 Query: 230 MIINP---NIVDLLSFRY 244 + I P + + RY Sbjct: 246 IHIKPGNQRFLSVYDKRY 263 >gi|224158660|ref|XP_002191045.1| PREDICTED: similar to thymidylate synthase, partial [Taeniopygia guttata] Length = 157 Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 75/161 (46%), Positives = 101/161 (62%), Gaps = 4/161 (2%) Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 Y +DQ+ ++++++ +P RR I+ AWN I MALPPCH L QFYV NG+LSCQL Sbjct: 1 YSNQGVDQLQKVIETIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQL 60 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 YQRSGD+ LG+PFNIASYSLLT M+A V G + G I + + LY QL R Sbjct: 61 YQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKVGYLI--ILFILLYT--VSLLLFQLQRE 116 Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PR P++ I I D+ +F+ EDF + Y PH I +++V Sbjct: 117 PRPFPKLKILREIKDISNFKAEDFQIEDYNPHPPIKMEMAV 157 >gi|119622123|gb|EAX01718.1| thymidylate synthetase, isoform CRA_c [Homo sapiens] Length = 135 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 71/135 (52%), Positives = 92/135 (68%) Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 + AWN + MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A Sbjct: 1 MCAWNPRDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIA 60 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249 + G + G+FIHTLGD H+Y NH E +QL R PR P++ I + + F+ EDF + Sbjct: 61 HITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQI 120 Query: 250 RSYEPHAAILAKVSV 264 Y PH I +++V Sbjct: 121 EGYNPHPTIKMEMAV 135 >gi|229138943|ref|ZP_04267522.1| Thymidylate synthase [Bacillus cereus BDRD-ST26] gi|228644568|gb|EEL00821.1| Thymidylate synthase [Bacillus cereus BDRD-ST26] Length = 124 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 77/124 (62%), Positives = 96/124 (77%) Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A G + GEF+ Sbjct: 1 MALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFV 60 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260 HT+GD H+Y NHFEQ + QL+R PR P++ +NP++ + F ED T+ Y+PH AI A Sbjct: 61 HTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKA 120 Query: 261 KVSV 264 V+V Sbjct: 121 PVAV 124 >gi|256545413|ref|ZP_05472775.1| thymidylate synthase [Anaerococcus vaginalis ATCC 51170] gi|256398809|gb|EEU12424.1| thymidylate synthase [Anaerococcus vaginalis ATCC 51170] Length = 287 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 21/273 (7%) Query: 2 HQYLDLLRHVIKFGSDRR-----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV 50 +Y+ + + +++ G D D T+ +R++ + PL++ +K+ Sbjct: 5 EKYIKIAKEILEKGYDEEELNKEVRPVWDDGESAYTKYLPQQVVRYEKGE-LPLISLRKI 63 Query: 51 HWKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSWPD--YDG 106 WKS + E+LW + SN L ++ V+ WD W ++DG LG YG Q G Sbjct: 64 AWKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNEDGNLGTAYGYQINKKFKSPETG 123 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 + +QI ++ ++ +P +RR I++ +V + M L PC L + V L+ L QR Sbjct: 124 QMTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGEYLNLTLVQR 183 Query: 167 SGDVFLGI---PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--S 221 SGD N Y +L M+A V G++ G+F+H + + H+Y H L Sbjct: 184 SGDFLAAAAPGGINAFQYYVLLRMVAQVTGYKAGDFVHFIQNYHIYKKHIPSVKKILEIK 243 Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 ++ P++ INP+I + F +DF L Y P Sbjct: 244 VDEKSKPRLEINPDIKEFKDFTIDDFKLIDYYP 276 >gi|324514855|gb|ADY46009.1| Thymidylate synthase [Ascaris suum] Length = 195 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 90/194 (46%), Positives = 121/194 (62%), Gaps = 22/194 (11%) Query: 1 MH-QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M +YL ++H+I G DRTGVGT S FG + L G PLLTTK+V+WK VV E Sbjct: 1 MRGKYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP---- 102 LLWF++GD++ L GV IWD ++ G+LGPIYG QWR + Sbjct: 61 LLWFIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYH 120 Query: 103 ----DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK 158 DY G +DQ++ +++ ++ +P SRR I++AWNV + +MALPPCH L QF V NG+ Sbjct: 121 GTDADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVRNGE 180 Query: 159 LSCQLYQRSGDVFL 172 LSCQLYQRSGD+ + Sbjct: 181 LSCQLYQRSGDMVI 194 >gi|325847871|ref|ZP_08170093.1| thymidylate synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480889|gb|EGC83942.1| thymidylate synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 288 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 19/272 (6%) Query: 2 HQYLDLLRHVIKFGSDRRD---------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51 +Y+++ +++++ G D G + F Q KG PL++ +K+ Sbjct: 6 KKYIEIAKNILENGYDEEKLNHEVRAVWEDGESAYTKFLPQEIVRYEKGEVPLISLRKIA 65 Query: 52 WKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSWPD--YDGN 107 WKS + E+LW + SN L ++ V+ WD W + +G LG YG Q GN Sbjct: 66 WKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNDEGNLGTAYGYQINKKFKSPETGN 125 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 + +QI ++ ++ +P +RR I++ +V + M L PC L + V L+ L QRS Sbjct: 126 MTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGDYLNLTLIQRS 185 Query: 168 GDVFLGI---PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SR 222 GD N Y +L M+A V G++ G+F+H + + H+Y H + Sbjct: 186 GDFLAAAAPGGINAFQYYVLLRMIAQVTGYKAGDFVHFIQNYHIYKKHIPIVKKIMEVKV 245 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 ++ P++ INP+I D F +DF L Y P Sbjct: 246 DEKSRPRLEINPDIKDFKDFTIDDFKLLDYYP 277 >gi|307243541|ref|ZP_07525689.1| thymidylate synthase [Peptostreptococcus stomatis DSM 17678] gi|306493097|gb|EFM65102.1| thymidylate synthase [Peptostreptococcus stomatis DSM 17678] Length = 277 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 131/264 (49%), Gaps = 24/264 (9%) Query: 7 LLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVV 56 L ++ G++ D T T R+DLSKG P++T ++V WKS + Sbjct: 11 LCNDILNSGNNTLGEKVRPKYADGTPSHTMFVNQVFERYDLSKGELPIVTLRQVAWKSGI 70 Query: 57 HELLWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114 E+LW + SN L R +G++ WDEW D +G YG + + D Sbjct: 71 KEILWIYQDQSNNLDLLRDKYGITWWDEWDLGDRTIGQRYGATVKRYKLMD--------K 122 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ++++L+ PY RRHI++ + A +++ L PC Q+ V +G L L QRS DV + Sbjct: 123 LLENLKNQPYGRRHIINLYQEADLEETAGLYPCAMETQWSVRDGYLDLTLIQRSSDVAVA 182 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP---RTLPQM 230 N Y L MM+A +G Q G F H + + H+Y+ H +Q ++R P ++ Sbjct: 183 NAINKIQYVALQMMVARHVGLQAGVFCHYVNNAHIYDRHIDQIKEMIARDPQEGHESVRL 242 Query: 231 IINPNIVDLLSFRYEDFTLRSYEP 254 ++NP+ + F +DFT+ +Y+P Sbjct: 243 VLNPDKTNFYDFTLDDFTMENYDP 266 >gi|242216400|ref|XP_002474008.1| predicted protein [Postia placenta Mad-698-R] gi|220726873|gb|EED80809.1| predicted protein [Postia placenta Mad-698-R] Length = 203 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 22/192 (11%) Query: 81 DEWADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 ++ ++G+LGP+YG QWR + DY G +DQ++ ++ +R DP RR I+SA Sbjct: 26 EDQHRREGDLGPVYGFQWRHFGARYTDCDADYSGQGVDQLAECIRKIREDPTDRRIILSA 85 Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192 WN A +LSC LYQRS D+ LGIPFNIASY+LLT ++A + Sbjct: 86 WNPADAPD--------------APRRLSCLLYQRSADLGLGIPFNIASYALLTHLVAHLT 131 Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252 + E I LGD H+Y +H + QL R+PR P + N + D+ F+ ED + Y Sbjct: 132 QTEPHELIIQLGDAHVYRDHVDALKEQLERTPRPFPTLRWNRRVEDVDDFKAEDIAVEGY 191 Query: 253 EPHAAILAKVSV 264 +P+ I K+SV Sbjct: 192 QPYPPIAMKMSV 203 >gi|212697068|ref|ZP_03305196.1| hypothetical protein ANHYDRO_01633 [Anaerococcus hydrogenalis DSM 7454] gi|212675843|gb|EEB35450.1| hypothetical protein ANHYDRO_01633 [Anaerococcus hydrogenalis DSM 7454] Length = 288 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 19/272 (6%) Query: 2 HQYLDLLRHVIKFGSDRRD---------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51 +Y+++ +++++ G D G + F Q KG PL++ +K+ Sbjct: 6 KKYIEIAKNILENGYDEEKLNHEVRAVWEDGESAYTKFLPQEIVRYEKGEVPLISLRKIA 65 Query: 52 WKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSWPD--YDGN 107 WKS + E+LW + SN L ++ V+ WD W + +G LG YG Q GN Sbjct: 66 WKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNDEGNLGTAYGYQVNKKFKSPETGN 125 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 + +QI ++ ++ +P +RR I++ +V + M L PC L + V L+ L QRS Sbjct: 126 MTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGDYLNLTLIQRS 185 Query: 168 GDVFLGI---PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SR 222 GD N Y +L M+A V G++ G+F+H + + H+Y H + Sbjct: 186 GDFLAAAAPGGINAFQYYVLLRMIAQVTGYKAGDFVHFIQNYHIYKKHIPIVKKIMEVKV 245 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 ++ P + INP+I D F +DF L Y P Sbjct: 246 DEKSRPILEINPDIKDFKDFTIDDFNLVDYYP 277 >gi|38707853|ref|NP_944928.1| Thymidylate synthase [Enterobacteria phage Felix 01] gi|33340456|gb|AAQ14807.1| putative thymidylate synthase [Enterobacteria phage Felix 01] Length = 299 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 103/297 (34%), Positives = 148/297 (49%), Gaps = 33/297 (11%) Query: 1 MHQ----YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 M Q Y ++L HV+ G R RTG + Q RFD+ GFPLLT+K+V + V+ Sbjct: 1 MSQADLSYKNILNHVLSVGELRTTRTGDVISAFAPPQFRFDMRTGFPLLTSKQVFTRQVI 60 Query: 57 HELLWFLRGDSNVSYLH-----RHGVSIWDEWADKDGEL----------------GPIYG 95 E LWFL G++ +S L + W W+D G IYG Sbjct: 61 GEALWFLNGENKLSELRYRTWGENDGERWTIWSDDFKRWLSSNYSSEQDWLEDAGGRIYG 120 Query: 96 VQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFY 153 VQWR++ ++G V+DQ+ ++V ++ D R +V+AWN A I + MAL PCH +FQ Y Sbjct: 121 VQWRNFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVMFQIY 180 Query: 154 VDN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 + N G++ Q YQRS D FLG+PFNIASY + +L + G+ I GD +Y NH Sbjct: 181 ITNEGEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQNH 240 Query: 213 FEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264 +Q ++ P I + DL DF + +Y+ I A +SV Sbjct: 241 MKQVYELMNNEEFHAPTFEIGLPLNTLSDLKHLTASDFIGGINNYKHAGKIEAPLSV 297 >gi|269975303|gb|ACZ55527.1| thymidylate synthase [Staphylococcus phage SA1] Length = 299 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 103/297 (34%), Positives = 147/297 (49%), Gaps = 33/297 (11%) Query: 1 MHQ----YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56 M Q Y ++L HV+ G R RTG + Q RFD+ GFPLLT+K+V + V+ Sbjct: 1 MSQADSSYKNILNHVLSVGELRTTRTGDVISAFAPPQFRFDMRTGFPLLTSKQVFTRQVI 60 Query: 57 HELLWFLRGDSNVSYLH-----RHGVSIWDEWADKDGEL----------------GPIYG 95 E LWFL G++ + L + W W+D G IYG Sbjct: 61 GEALWFLNGENKLGELRYRTWDENDGERWTIWSDDFKRWLSSNYSSEQDWLDDAGGRIYG 120 Query: 96 VQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFY 153 VQWR++ ++G V+DQ+ ++V ++ D R +V+AWN A I + MAL PCH LFQ Y Sbjct: 121 VQWRNFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVLFQIY 180 Query: 154 VDN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 + N G++ Q YQRS D FLG+PFNIASY + +L + G+ I GD +Y NH Sbjct: 181 ITNEGEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQNH 240 Query: 213 FEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264 +Q ++ P I + DL DF + +Y+ I A +SV Sbjct: 241 MKQVYELMNNEEFHAPTFEIGIPLNTLSDLKHLTASDFIGGINNYQHAGKIEAPLSV 297 >gi|257451431|ref|ZP_05616730.1| thymidylate synthase [Fusobacterium sp. 3_1_5R] gi|257466896|ref|ZP_05631207.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563] gi|315918043|ref|ZP_07914283.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563] gi|317058011|ref|ZP_07922496.1| thymidylate synthase [Fusobacterium sp. 3_1_5R] gi|313683687|gb|EFS20522.1| thymidylate synthase [Fusobacterium sp. 3_1_5R] gi|313691918|gb|EFS28753.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563] Length = 272 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 17/274 (6%) Query: 2 HQYLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHW 52 +Y L+ ++ + G D T + GYQ R D S K L+T++K W Sbjct: 5 EEYRKLVEYICEKGEMVEGKVRTVYADGTPAYYKQVVGYQFRLDNSGKEAFLITSRKAAW 64 Query: 53 KSVVHELLWFL-RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQ 111 KS + EL W +NV L G W+EW +DG +G YG Q Q Sbjct: 65 KSSIRELYWIWYLQSNNVDELVDLGCKFWNEWKQEDGTIGKAYGYQ---IGKKTFQYKSQ 121 Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 + ++ ++ +P SRR + W +DKMAL PC L Q+ V NGKL ++ QRS DV Sbjct: 122 LDYVIGEIKNNPNSRRILTEIWVPEDLDKMALTPCVHLTQWTVLNGKLYLEVRQRSCDVA 181 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+ N+ Y +L ++A G+ I T+ + H+Y+ H E Q+ + P + Sbjct: 182 LGLVANVFQYQVLHKLVARECNLNCGDLIWTIHNAHIYDRHLEDLQKQVRETGTEKPILD 241 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAI-LAKVSV 264 + ++ + T+ +Y+P +V++ Sbjct: 242 LGEEGLENFHQK---VTIENYKPLENNYKYEVAI 272 >gi|119622124|gb|EAX01719.1| thymidylate synthetase, isoform CRA_d [Homo sapiens] Length = 208 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 68/128 (53%), Positives = 88/128 (68%) Query: 137 LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196 + MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + Sbjct: 81 DLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKP 140 Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256 G+FIHTLGD H+Y NH E +QL R PR P++ I + + F+ EDF + Y PH Sbjct: 141 GDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHP 200 Query: 257 AILAKVSV 264 I +++V Sbjct: 201 TIKMEMAV 208 >gi|319946995|ref|ZP_08021229.1| thymidylate synthase [Streptococcus australis ATCC 700641] gi|319747043|gb|EFV99302.1| thymidylate synthase [Streptococcus australis ATCC 700641] Length = 279 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +R +++ G D T ++ G M FDL+KG FP+ T + + KS + E+ Sbjct: 12 IRRIMEEGVWSEQARPKYKDGTTANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKEM 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W + G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLELLNDKYQVHYWNDWEVGETGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEESEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFEIKAEDFVLEDYDPVKPQLKFDLAI 279 >gi|238801819|ref|YP_002922869.1| thymidylate synthase [Enterobacteria phage WV8] gi|216263032|gb|ACJ71900.1| thymidylate synthase [Enterobacteria phage WV8] Length = 299 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 104/298 (34%), Positives = 147/298 (49%), Gaps = 35/298 (11%) Query: 1 MHQ----YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGFPLLTTKKVHWKSV 55 M Q Y ++L HV+ G R RTG S F RFD+ GFPLLT+K+V + V Sbjct: 1 MSQADSSYKNILNHVLSVGELRTTRTG-DVISAFAPPKFRFDMRTGFPLLTSKQVFTRQV 59 Query: 56 VHELLWFLRGDSNVSYLH-----RHGVSIWDEWADKDGEL----------------GPIY 94 + E LWFL G++ + L + W W+D G IY Sbjct: 60 IGEALWFLNGENKLGELRYRTWGENDGERWTIWSDDFKRWLSSNYSSEQDWLEDAGGRIY 119 Query: 95 GVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQF 152 GVQWR++ ++G V+DQ+ ++V ++ D R +V+AWN A I + MAL PCH LFQ Sbjct: 120 GVQWRNFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVLFQI 179 Query: 153 YVDN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 Y+ N G++ Q YQRS D FLG+PFNIASY + +L + G+ I GD +Y N Sbjct: 180 YITNEGEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQN 239 Query: 212 HFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264 H +Q ++ P I + DL DF + +Y+ I A +SV Sbjct: 240 HMKQVYELMNNEEFHAPTFEIGVQLNTLSDLKHLTASDFIGGINNYQHAGKIEAPLSV 297 >gi|289423078|ref|ZP_06424893.1| thymidylate synthase [Peptostreptococcus anaerobius 653-L] gi|289156409|gb|EFD05059.1| thymidylate synthase [Peptostreptococcus anaerobius 653-L] Length = 277 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 25/276 (9%) Query: 6 DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSV 55 +L ++ + D + T ++DLSKG P++T ++ WKS Sbjct: 10 NLCNEIMTSNNSTEGEKVRPKYADGSPSHTIFVNQVFEKYDLSKGELPIVTLRQTAWKSG 69 Query: 56 VHELLWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + +N + + +G++ WDEW D +G YG + + D I+ Sbjct: 70 IKEILWIYQDQTNDLDILKDKYGITWWDEWDIGDRTIGQRYGATVKRY--------DLIN 121 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 ++ L+ PY RRHI++ + A + + L PC Q+ +G L L QRS D+ + Sbjct: 122 KLLDGLKNQPYGRRHIINLYQEADLAETKGLHPCAMETQWTARDGYLDMTLIQRSSDLLV 181 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP---Q 229 N Y L MM+A +G + G F H + + H+Y+ H +QA +SR P+ + Sbjct: 182 ANAINKIQYVALQMMVARHVGLEPGVFCHYVNNAHIYDRHIDQAKEIMSRKPQENDESVR 241 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 +++NP + F +DFT+ +Y P + ++++ Sbjct: 242 LVLNPEKTNFYDFTIDDFTMENYNPVKPNLKFEMAI 277 >gi|322387374|ref|ZP_08060984.1| thymidylate synthase [Streptococcus infantis ATCC 700779] gi|321141903|gb|EFX37398.1| thymidylate synthase [Streptococcus infantis ATCC 700779] Length = 279 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++ G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILNEGVFSEQARPKYKDGTVANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + +N + ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQTNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|306824917|ref|ZP_07458261.1| thymidylate synthase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433128|gb|EFM36100.1| thymidylate synthase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 279 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DL+KG FP+ T + + KS + E+ Sbjct: 12 IERILKEGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLEVLNSKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|148989041|ref|ZP_01820441.1| thymidylate synthase [Streptococcus pneumoniae SP6-BS73] gi|147925538|gb|EDK76615.1| thymidylate synthase [Streptococcus pneumoniae SP6-BS73] Length = 279 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ ++ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTSFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|254520802|ref|ZP_05132858.1| thymidylate synthase [Clostridium sp. 7_2_43FAA] gi|226914551|gb|EEH99752.1| thymidylate synthase [Clostridium sp. 7_2_43FAA] Length = 280 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 22/263 (8%) Query: 6 DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSV 55 D L ++ G D T T ++D+SKG FP+ T + V WKS Sbjct: 15 DTLNDILTSGVSTEGHKVRPKYKDGTPAHTIYINQVVEKYDISKGEFPITTLRPVAWKSG 74 Query: 56 VHELLWFLRGDSN-VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + E+LW + SN +S L G++ W +W + G +G YG + + D ++ Sbjct: 75 IKEILWIYQKASNELSVLEEMGITWWGDWEVNGTGTIGQRYGATVKKY--------DLMN 126 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 ++ L+ +PY+RRHI+ + A ++ L PC L + V + L L+QRS D Sbjct: 127 KLLDGLKNEPYTRRHIIDLYQYADFEETPGLNPCAFLTVWSVRDKYLDVTLHQRSSDYCT 186 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMI 231 N Y L MM+A +G + G F+H + ++H+Y+ H EQA + R+P P++I Sbjct: 187 AGHINKTQYVALMMMVARHVGLKPGVFMHVVDNLHIYDRHVEQAKELIERTPSDKQPKLI 246 Query: 232 INPNIVDLLSFRYEDFTLRSYEP 254 + + F +DF + YEP Sbjct: 247 LKEGKTNFYDFTIDDFEMVDYEP 269 >gi|257464160|ref|ZP_05628541.1| thymidylate synthase [Fusobacterium sp. D12] gi|317061676|ref|ZP_07926161.1| thymidylate synthase [Fusobacterium sp. D12] gi|313687352|gb|EFS24187.1| thymidylate synthase [Fusobacterium sp. D12] Length = 272 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 25/278 (8%) Query: 2 HQYLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHW 52 +Y L+ ++ + G D T + GYQ R D + L+T++K W Sbjct: 5 EEYRKLVDYICEKGEMVEGKVRTVYADGTPAYYKQIVGYQFRLDNAGDEAFLITSRKAAW 64 Query: 53 KSVVHELLWFL-RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQ 111 KS + EL W +NV L G W+EW +DG +G YG Q +Q Sbjct: 65 KSSIRELYWIWYLQSNNVDELVDLGCKFWNEWKQEDGTIGKAYGYQIAKKT---FQYQNQ 121 Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 + ++ ++ +P SRR + W +++MAL PC L Q+ V NGKL ++ QRS DV Sbjct: 122 LDYVIGEIKNNPNSRRILTEIWIPEELEQMALTPCVHLTQWTVLNGKLYLEVRQRSCDVA 181 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 LG+ N+ Y +L ++A G+ I T+ + H+Y+ H E Q+ + R P++ Sbjct: 182 LGLVANVFQYQVLHKLVARECHLSCGDLIWTIHNAHIYDRHLEDLQKQVKETGREKPRL- 240 Query: 232 INPNIVDLLSFRYEDF----TLRSYEPHAA-ILAKVSV 264 DL E+F + +Y P +V++ Sbjct: 241 ------DLGEAGLENFHQKVRVENYHPLDNDYKYEVAI 272 >gi|301793850|emb|CBW36243.1| thymidylate synthase [Streptococcus pneumoniae INV104] gi|332204686|gb|EGJ18751.1| thymidylate synthase [Streptococcus pneumoniae GA47901] Length = 279 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP++T + + KS + E+ Sbjct: 12 IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPIITLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ ++ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|15900570|ref|NP_345174.1| thymidylate synthase [Streptococcus pneumoniae TIGR4] gi|15902629|ref|NP_358179.1| thymidylate synthase [Streptococcus pneumoniae R6] gi|111658670|ref|ZP_01409313.1| hypothetical protein SpneT_02000176 [Streptococcus pneumoniae TIGR4] gi|116516193|ref|YP_816080.1| thymidylate synthase [Streptococcus pneumoniae D39] gi|148992222|ref|ZP_01821945.1| thymidylate synthase [Streptococcus pneumoniae SP9-BS68] gi|148997250|ref|ZP_01824904.1| thymidylate synthase [Streptococcus pneumoniae SP11-BS70] gi|149002362|ref|ZP_01827304.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS69] gi|149010709|ref|ZP_01832080.1| thymidylate synthase [Streptococcus pneumoniae SP19-BS75] gi|149020283|ref|ZP_01835175.1| thymidylate synthase [Streptococcus pneumoniae SP23-BS72] gi|168482897|ref|ZP_02707849.1| thymidylate synthase [Streptococcus pneumoniae CDC1873-00] gi|168488350|ref|ZP_02712549.1| thymidylate synthase [Streptococcus pneumoniae SP195] gi|168492256|ref|ZP_02716399.1| thymidylate synthase [Streptococcus pneumoniae CDC0288-04] gi|168492827|ref|ZP_02716970.1| thymidylate synthase [Streptococcus pneumoniae CDC3059-06] gi|168575339|ref|ZP_02721275.1| thymidylate synthase [Streptococcus pneumoniae MLV-016] gi|169833725|ref|YP_001694142.1| thymidylate synthase [Streptococcus pneumoniae Hungary19A-6] gi|225856362|ref|YP_002737873.1| thymidylate synthase [Streptococcus pneumoniae P1031] gi|225858497|ref|YP_002740007.1| thymidylate synthase [Streptococcus pneumoniae 70585] gi|225860660|ref|YP_002742169.1| thymidylate synthase [Streptococcus pneumoniae Taiwan19F-14] gi|237650310|ref|ZP_04524562.1| thymidylate synthase [Streptococcus pneumoniae CCRI 1974] gi|237821973|ref|ZP_04597818.1| thymidylate synthase [Streptococcus pneumoniae CCRI 1974M2] gi|298229819|ref|ZP_06963500.1| thymidylate synthase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254801|ref|ZP_06978387.1| thymidylate synthase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502463|ref|YP_003724403.1| thymidylate synthase [Streptococcus pneumoniae TCH8431/19A] gi|307067287|ref|YP_003876253.1| thymidylate synthase [Streptococcus pneumoniae AP200] gi|54039799|sp|P67050|TYSY_STRR6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54042284|sp|P67049|TYSY_STRPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|122279034|sp|Q04LL8|TYSY_STRP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790250|sp|C1C631|TYSY_STRP7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790253|sp|C1CJD5|TYSY_STRZP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790254|sp|C1CQE7|TYSY_STRZT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|14972144|gb|AAK74814.1| thymidylate synthase [Streptococcus pneumoniae TIGR4] gi|15458166|gb|AAK99389.1| Thymidylate synthase [Streptococcus pneumoniae R6] gi|116076769|gb|ABJ54489.1| thymidylate synthase [Streptococcus pneumoniae D39] gi|147756950|gb|EDK63990.1| thymidylate synthase [Streptococcus pneumoniae SP11-BS70] gi|147759677|gb|EDK66668.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS69] gi|147765190|gb|EDK72119.1| thymidylate synthase [Streptococcus pneumoniae SP19-BS75] gi|147928848|gb|EDK79860.1| thymidylate synthase [Streptococcus pneumoniae SP9-BS68] gi|147930585|gb|EDK81567.1| thymidylate synthase [Streptococcus pneumoniae SP23-BS72] gi|168996227|gb|ACA36839.1| thymidylate synthase [Streptococcus pneumoniae Hungary19A-6] gi|172043796|gb|EDT51842.1| thymidylate synthase [Streptococcus pneumoniae CDC1873-00] gi|183573208|gb|EDT93736.1| thymidylate synthase [Streptococcus pneumoniae SP195] gi|183573554|gb|EDT94082.1| thymidylate synthase [Streptococcus pneumoniae CDC0288-04] gi|183576820|gb|EDT97348.1| thymidylate synthase [Streptococcus pneumoniae CDC3059-06] gi|183578413|gb|EDT98941.1| thymidylate synthase [Streptococcus pneumoniae MLV-016] gi|225721852|gb|ACO17706.1| thymidylate synthase [Streptococcus pneumoniae 70585] gi|225726198|gb|ACO22050.1| thymidylate synthase [Streptococcus pneumoniae P1031] gi|225726770|gb|ACO22621.1| thymidylate synthase [Streptococcus pneumoniae Taiwan19F-14] gi|298238058|gb|ADI69189.1| thymidylate synthase [Streptococcus pneumoniae TCH8431/19A] gi|306408824|gb|ADM84251.1| Thymidylate synthase [Streptococcus pneumoniae AP200] gi|327390399|gb|EGE88740.1| thymidylate synthase [Streptococcus pneumoniae GA04375] gi|332074474|gb|EGI84950.1| thymidylate synthase [Streptococcus pneumoniae GA17570] gi|332075963|gb|EGI86429.1| thymidylate synthase [Streptococcus pneumoniae GA41301] gi|332202546|gb|EGJ16615.1| thymidylate synthase [Streptococcus pneumoniae GA41317] gi|332203827|gb|EGJ17894.1| thymidylate synthase [Streptococcus pneumoniae GA47368] Length = 279 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ ++ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|149005786|ref|ZP_01829525.1| thymidylate synthase [Streptococcus pneumoniae SP18-BS74] gi|307126865|ref|YP_003878896.1| thymidylate synthase [Streptococcus pneumoniae 670-6B] gi|147762726|gb|EDK69686.1| thymidylate synthase [Streptococcus pneumoniae SP18-BS74] gi|306483927|gb|ADM90796.1| thymidylate synthase [Streptococcus pneumoniae 670-6B] gi|332077096|gb|EGI87558.1| thymidylate synthase [Streptococcus pneumoniae GA17545] Length = 279 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ ++ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLIQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|182683595|ref|YP_001835342.1| thymidylate synthase [Streptococcus pneumoniae CGSP14] gi|303254749|ref|ZP_07340850.1| thymidylate synthase [Streptococcus pneumoniae BS455] gi|303259941|ref|ZP_07345915.1| thymidylate synthase [Streptococcus pneumoniae SP-BS293] gi|303261347|ref|ZP_07347295.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS292] gi|303264013|ref|ZP_07349934.1| thymidylate synthase [Streptococcus pneumoniae BS397] gi|303266327|ref|ZP_07352217.1| thymidylate synthase [Streptococcus pneumoniae BS457] gi|303268794|ref|ZP_07354582.1| thymidylate synthase [Streptococcus pneumoniae BS458] gi|182628929|gb|ACB89877.1| thymidylate synthase [Streptococcus pneumoniae CGSP14] gi|301801532|emb|CBW34224.1| thymidylate synthase [Streptococcus pneumoniae INV200] gi|302598289|gb|EFL65334.1| thymidylate synthase [Streptococcus pneumoniae BS455] gi|302637481|gb|EFL67968.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS292] gi|302638860|gb|EFL69321.1| thymidylate synthase [Streptococcus pneumoniae SP-BS293] gi|302641659|gb|EFL72018.1| thymidylate synthase [Streptococcus pneumoniae BS458] gi|302644138|gb|EFL74395.1| thymidylate synthase [Streptococcus pneumoniae BS457] gi|302646418|gb|EFL76644.1| thymidylate synthase [Streptococcus pneumoniae BS397] Length = 279 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ ++ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRIDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|322391615|ref|ZP_08065084.1| thymidylate synthase [Streptococcus peroris ATCC 700780] gi|321145698|gb|EFX41090.1| thymidylate synthase [Streptococcus peroris ATCC 700780] Length = 279 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++ G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILNEGVFSEQARPKYKDGTVANSKYVTGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + +N + ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQTNSLEVLNDKYSVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|307704483|ref|ZP_07641392.1| thymidylate synthase [Streptococcus mitis SK597] gi|307621952|gb|EFO00980.1| thymidylate synthase [Streptococcus mitis SK597] Length = 279 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DL+KG FP+ T + + KS + E+ Sbjct: 12 IERILKEGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ ++ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|306829804|ref|ZP_07462991.1| thymidylate synthase [Streptococcus mitis ATCC 6249] gi|304427815|gb|EFM30908.1| thymidylate synthase [Streptococcus mitis ATCC 6249] Length = 279 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLEVLNSKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLGREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|293365781|ref|ZP_06612487.1| thymidylate synthase [Streptococcus oralis ATCC 35037] gi|307703351|ref|ZP_07640294.1| thymidylate synthase [Streptococcus oralis ATCC 35037] gi|291315714|gb|EFE56161.1| thymidylate synthase [Streptococcus oralis ATCC 35037] gi|307623087|gb|EFO02081.1| thymidylate synthase [Streptococcus oralis ATCC 35037] Length = 279 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLDVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|18656511|gb|AAL77812.1|AF389451_19 thymidylate synthase [Tiger frog virus] Length = 124 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 69/124 (55%), Positives = 88/124 (70%) Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 MA+PPCH + QFYV +G+LSC LYQRSGD+ LG PFNIASYSLLT M+A V G + GEF+ Sbjct: 1 MAIPPCHAMCQFYVSDGELSCHLYQRSGDMGLGAPFNIASYSLLTYMMAHVTGLEPGEFV 60 Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260 HTLGD H+Y +H E QL R PR P + IN ++ L F+ EDF+L Y+PH I Sbjct: 61 HTLGDAHVYLDHVEPLKTQLEREPRPFPTLRINRSVESLDDFKAEDFSLEGYDPHPTIKM 120 Query: 261 KVSV 264 +++V Sbjct: 121 RMAV 124 >gi|289803171|ref|ZP_06533800.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 130 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 76/130 (58%), Positives = 106/130 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP DG IDQI++++ L+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120 Query: 121 ADPYSRRHIV 130 DP SRR IV Sbjct: 121 NDPDSRRIIV 130 >gi|307706250|ref|ZP_07643064.1| thymidylate synthase [Streptococcus mitis SK321] gi|307618341|gb|EFN97494.1| thymidylate synthase [Streptococcus mitis SK321] Length = 279 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DL+KG FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|219681334|ref|YP_002456098.1| putative thymidylate synthase [Erwinia phage phiEa21-4] gi|199580601|gb|ACH88988.1| putative thymidylate synthase [Erwinia phage phiEa21-4] Length = 311 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 100/310 (32%), Positives = 140/310 (45%), Gaps = 52/310 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRST-FGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 QY +++ G R R+G T S F +R D+ K FPLLT K V V ELL Sbjct: 6 QQYKAFTANILSNGELRHSRSG-NTISVPFPEDLRIDVRKEFPLLTCKSVPMSLVAGELL 64 Query: 61 WFLRGDSNVSYLHRHGV-------SIWDEWA---------------------------DK 86 WFL G +++ L + +IW D Sbjct: 65 WFLAGKTDLHSLRMYQFGSDEGQNTIWTADYERYSKAVKSLIRKVQTGESQEKTLRKIDA 124 Query: 87 DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM--ALP 144 +LG IYG QWR + D DQI+ +++ ++ +P SR HIVSAWN + ALP Sbjct: 125 QEDLGMIYGSQWREFESCD-TTCDQITRLIEGIKENPASRYHIVSAWNPVAVANNLGALP 183 Query: 145 PCHCLFQFYVDNG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 PCH FQ Y G + + YQRS D FLG+PFNIASY+LL +LA + G+ I + Sbjct: 184 PCHMFFQVYASEGGYMDLRWYQRSVDTFLGLPFNIASYALLLRILAQMTGYTARYVIGSF 243 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMII-NPNIVDLLS--------FRYEDFTLRSYEP 254 GD H+Y NH + P + + N ++ L S F+ L+ Y+ Sbjct: 244 GDAHIYENHVPAVMQMMDNPEFDAPTLKLDNLDLSSLDSVLKLNGLVFKN---ALQDYQN 300 Query: 255 HAAILAKVSV 264 + A +SV Sbjct: 301 AGVVKAPLSV 310 >gi|322376984|ref|ZP_08051477.1| thymidylate synthase [Streptococcus sp. M334] gi|321282791|gb|EFX59798.1| thymidylate synthase [Streptococcus sp. M334] Length = 279 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DL+KG FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG R D I+ ++ Sbjct: 72 LWIYQDQSNSLEMLNDKYNVHYWNDWEVGDTGTIGERYGAVVRKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|322375542|ref|ZP_08050054.1| thymidylate synthase [Streptococcus sp. C300] gi|321279250|gb|EFX56291.1| thymidylate synthase [Streptococcus sp. C300] Length = 279 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DL+KG FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + +++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLEVLNNKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ + L PC F V + L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYEAFEATDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|157151425|ref|YP_001450432.1| thymidylate synthase [Streptococcus gordonii str. Challis substr. CH1] gi|189036950|sp|A8AXC2|TYSY_STRGC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|157076219|gb|ABV10902.1| thymidylate synthase [Streptococcus gordonii str. Challis substr. CH1] Length = 279 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 80/276 (28%), Positives = 134/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +R ++K G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IRRILKEGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLAANPWNRRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDEDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279 >gi|34485973|gb|AAM75815.2| thymidylate synthase [Corallochytrium limacisporum] Length = 207 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 21/167 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYL+L+ +I GS + DRTG GT S FG QMRF L FPLLTTK+V W+ V ELL Sbjct: 41 RQYLELVEKIINEGSRKGDRTGTGTLSIFGAQMRFSLRDDIFPLLTTKRVFWRGVAEELL 100 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102 WF+ GD+N L V IWD ++G+LGP+YG QWR + Sbjct: 101 WFVSGDTNAKTLSDKNVKIWDANGSREFLDNRGLTDREEGDLGPVYGFQWRHFGAEYTTM 160 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCH 147 DY G +DQ++ ++Q+L+ +P RR I+SAWN A + KMALPPCH Sbjct: 161 HDDYTGKGVDQLAEVIQTLQENPNCRRMIISAWNPADLPKMALPPCH 207 >gi|307706041|ref|ZP_07642862.1| thymidylate synthase [Streptococcus mitis SK564] gi|307620399|gb|EFN99514.1| thymidylate synthase [Streptococcus mitis SK564] Length = 279 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DL+KG FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ ++ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|315613465|ref|ZP_07888373.1| thymidylate synthase [Streptococcus sanguinis ATCC 49296] gi|315314461|gb|EFU62505.1| thymidylate synthase [Streptococcus sanguinis ATCC 49296] Length = 279 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLS + FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLSKEEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLDVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLGREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|194396733|ref|YP_002037325.1| thymidylate synthase [Streptococcus pneumoniae G54] gi|194356400|gb|ACF54848.1| thymidylate synthase [Streptococcus pneumoniae G54] Length = 279 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ + Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLF 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRIDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|148985252|ref|ZP_01818475.1| thymidylate synthase [Streptococcus pneumoniae SP3-BS71] gi|168487239|ref|ZP_02711747.1| thymidylate synthase [Streptococcus pneumoniae CDC1087-00] gi|221231485|ref|YP_002510637.1| thymidylate synthase [Streptococcus pneumoniae ATCC 700669] gi|225854195|ref|YP_002735707.1| thymidylate synthase [Streptococcus pneumoniae JJA] gi|254790251|sp|B8ZMQ1|TYSY_STRPJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|254790252|sp|C1CD36|TYSY_STRZJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|147922450|gb|EDK73569.1| thymidylate synthase [Streptococcus pneumoniae SP3-BS71] gi|183569880|gb|EDT90408.1| thymidylate synthase [Streptococcus pneumoniae CDC1087-00] gi|220673945|emb|CAR68454.1| thymidylate synthase [Streptococcus pneumoniae ATCC 700669] gi|225722869|gb|ACO18722.1| thymidylate synthase [Streptococcus pneumoniae JJA] gi|301799707|emb|CBW32272.1| thymidylate synthase [Streptococcus pneumoniae OXC141] Length = 279 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IECILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ ++ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|312863183|ref|ZP_07723421.1| thymidylate synthase [Streptococcus vestibularis F0396] gi|322517189|ref|ZP_08070072.1| thymidylate synthase [Streptococcus vestibularis ATCC 49124] gi|311100719|gb|EFQ58924.1| thymidylate synthase [Streptococcus vestibularis F0396] gi|322124248|gb|EFX95764.1| thymidylate synthase [Streptococcus vestibularis ATCC 49124] Length = 286 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 132/278 (47%), Gaps = 24/278 (8%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + +++ G D T ++ G +DLS+G FP+ T + + KS + E+ Sbjct: 12 ITKILEEGVWSEQARPKYKDGTTANSKYITGAFAEYDLSRGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114 W + +N + + V W++W +D P RS G V+ D I+ Sbjct: 72 FWIYQDQTNSLDVLEDKYNVHYWNDWEVEDV---PANNGDKRSIGQRYGAVVKKHDIINR 128 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169 ++ L A+P++RR+++S W+ ++ L PC F V + L L QRS D Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSND 188 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228 + + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248 Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++I+N P+ + + EDF L Y+P + +++ Sbjct: 249 RLILNVPDGTNFFDIKPEDFELVDYDPVKPQLKFDLAI 286 >gi|307708422|ref|ZP_07644888.1| thymidylate synthase [Streptococcus mitis NCTC 12261] gi|307615521|gb|EFN94728.1| thymidylate synthase [Streptococcus mitis NCTC 12261] Length = 279 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYMTGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ ++ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|327198463|ref|YP_004327051.1| putative thymidylate synthase [Erwinia phage phiEa104] gi|311875159|emb|CBX44419.1| putative thymidylate synthase [Erwinia phage phiEa104] Length = 311 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 101/310 (32%), Positives = 140/310 (45%), Gaps = 52/310 (16%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRST-FGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 QY +++ G R R+G T S F +R D+ K FPLLT K V V ELL Sbjct: 6 QQYKAFTANILSNGELRHSRSG-NTISVPFPEDLRIDVRKEFPLLTCKSVPMSLVAGELL 64 Query: 61 WFLRGDSNVSYLHRHGV-------SIWDEWA---------------------------DK 86 WFL G +++ L + +IW D Sbjct: 65 WFLAGKTDLHSLRMYQFGSDEGQNTIWTADYERYSKAVKSLIRKVQTGELQEKTLRKIDA 124 Query: 87 DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM--ALP 144 +LG IYG QWR + D DQI+ ++Q ++ +P SR HIVSAWN + ALP Sbjct: 125 QEDLGMIYGSQWREFESCD-TTCDQITRLIQGIKENPASRYHIVSAWNPVAVANNLGALP 183 Query: 145 PCHCLFQFYVDNG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 PCH FQ Y G + + YQRS D FLG+PFNIASY+LL +LA + G+ I + Sbjct: 184 PCHMFFQVYASEGGYMDLRWYQRSVDTFLGLPFNIASYALLLRILAQMTGYTARYVIGSF 243 Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMII-NPNIVDLLS--------FRYEDFTLRSYEP 254 GD H+Y NH + P + + N ++ L S F+ L+ Y+ Sbjct: 244 GDAHIYENHVPAVMQMMDNPEFDAPTLKLDNLDLSSLDSVLKLNGLVFKN---ALQDYQN 300 Query: 255 HAAILAKVSV 264 + A +SV Sbjct: 301 AGVVKAPLSV 310 >gi|289168310|ref|YP_003446579.1| thymidylate synthase [Streptococcus mitis B6] gi|288907877|emb|CBJ22717.1| thymidylate synthase [Streptococcus mitis B6] Length = 279 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DL+KG FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ ++ Sbjct: 72 LWIYQDQSNSLDVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + R +DF L Y P + +++ Sbjct: 244 VLNVPDKTNFFDIRADDFELVDYNPVKPQLKFDLAI 279 >gi|331266063|ref|YP_004325693.1| thymidylate synthase [Streptococcus oralis Uo5] gi|326682735|emb|CBZ00352.1| thymidylate synthase [Streptococcus oralis Uo5] Length = 279 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYVTGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+I+S W+ + L PC F V + L L QRS D+ Sbjct: 124 KQLEENPWNRRNIISLWDYEAFEATDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRKPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279 >gi|327462282|gb|EGF08609.1| thymidylate synthase [Streptococcus sanguinis SK1] Length = 279 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDVTLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELIDYDPVKPQLKFDLAI 279 >gi|223932110|ref|ZP_03624114.1| Thymidylate synthase [Streptococcus suis 89/1591] gi|302023730|ref|ZP_07248941.1| thymidylate synthase [Streptococcus suis 05HAS68] gi|330832764|ref|YP_004401589.1| thymidylate synthase [Streptococcus suis ST3] gi|223899091|gb|EEF65448.1| Thymidylate synthase [Streptococcus suis 89/1591] gi|329306987|gb|AEB81403.1| thymidylate synthase [Streptococcus suis ST3] Length = 279 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +R +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IRKIMEEGVFSENARPRYKDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEI 71 Query: 60 LWFLRGDSN-VSYLHR-HGVSIWDEWADK-DGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + +N +S L +GV W++W + G +G YG + D IS I+ Sbjct: 72 LWIYQDQTNDLSVLQEKYGVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ D+ L PC F V L L QRS D+ Sbjct: 124 KQLEENPWNRRNVISLWDYEAFDQSAGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R+P + P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + R EDF L Y P + +++ Sbjct: 244 VLNVPDGTNFFDIRAEDFELVDYNPVKPQLKFDLAI 279 >gi|270292276|ref|ZP_06198490.1| thymidylate synthase [Streptococcus sp. M143] gi|270279322|gb|EFA25165.1| thymidylate synthase [Streptococcus sp. M143] Length = 279 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++K G D T ++ G +DL+ G FP+ T + + KS + E+ Sbjct: 12 IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAMGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLEVLNSKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKIGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYNPVKPQLKFDLAI 279 >gi|146318488|ref|YP_001198200.1| thymidylate synthase [Streptococcus suis 05ZYH33] gi|146320681|ref|YP_001200392.1| thymidylate synthase [Streptococcus suis 98HAH33] gi|253751616|ref|YP_003024757.1| thymidylate synthase [Streptococcus suis SC84] gi|253753518|ref|YP_003026659.1| thymidylate synthase [Streptococcus suis P1/7] gi|253755657|ref|YP_003028797.1| thymidylate synthase [Streptococcus suis BM407] gi|166231739|sp|A4W0V3|TYSY_STRS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231741|sp|A4VUL1|TYSY_STRSY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|145689294|gb|ABP89800.1| Thymidylate synthase [Streptococcus suis 05ZYH33] gi|145691487|gb|ABP91992.1| Thymidylate synthase [Streptococcus suis 98HAH33] gi|251815905|emb|CAZ51519.1| thymidylate synthase [Streptococcus suis SC84] gi|251818121|emb|CAZ55915.1| thymidylate synthase [Streptococcus suis BM407] gi|251819764|emb|CAR45658.1| thymidylate synthase [Streptococcus suis P1/7] gi|292558271|gb|ADE31272.1| Thymidylate synthase [Streptococcus suis GZ1] Length = 279 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +R +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IRKIMEEGVFSENARPRYKDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEI 71 Query: 60 LWFLRGDSN-VSYLHR-HGVSIWDEWADK-DGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + +N +S L +GV W++W + G +G YG + D IS I+ Sbjct: 72 LWIYQDQTNDLSVLQEKYGVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ D+ L PC F V L L QRS D+ Sbjct: 124 KQLEENPWNRRNVISLWDYEAFDQSAGLLPCAFQTLFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R+P + P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + R EDF L Y P + +++ Sbjct: 244 VLNVPDGTNFFDIRAEDFELVDYNPVKPQLKFDLAI 279 >gi|262282289|ref|ZP_06060057.1| thymidylate synthase [Streptococcus sp. 2_1_36FAA] gi|262261580|gb|EEY80278.1| thymidylate synthase [Streptococcus sp. 2_1_36FAA] Length = 279 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +R ++K G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IRRILKEGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W G +G YG + D I I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGATGTIGQRYGAVVKKH--------DIIHIIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279 >gi|322372507|ref|ZP_08047043.1| thymidylate synthase [Streptococcus sp. C150] gi|321277549|gb|EFX54618.1| thymidylate synthase [Streptococcus sp. C150] Length = 286 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 75/278 (26%), Positives = 132/278 (47%), Gaps = 24/278 (8%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + +++ G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 ITKIMEEGVWSEQARPKYKDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114 W + +N + + V W++W +D P RS G V+ D I+ Sbjct: 72 FWIYQDQTNSLDVLEDKYNVHYWNDWEVEDV---PANNGDKRSIGQRYGAVVKKHDIINR 128 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169 ++ L A+P++RR+++S W+ ++ L PC F V + L L QRS D Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSND 188 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228 + + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHVYDNQFEQAEELLKRQPSDCQP 248 Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++I+N P+ + + EDF L Y+P + +++ Sbjct: 249 RLILNVPDGTNFFDIKPEDFELVDYDPVQPQLKFDLAI 286 >gi|228478258|ref|ZP_04062866.1| thymidylate synthase [Streptococcus salivarius SK126] gi|228249937|gb|EEK09207.1| thymidylate synthase [Streptococcus salivarius SK126] Length = 286 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 24/278 (8%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + +++ G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 ITKIMEEGVWSEQARPKYKDGTTANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114 W + +N + + V W++W + P RS G V+ D I+ Sbjct: 72 FWIYQDQTNSLDVLEDKYNVHYWNDWEVEGV---PANNGDKRSIGQRYGAVVKKHDIINR 128 Query: 115 IVQSLRADPYSRRHIVSAWNVALID-KMALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169 ++ L A+P++RR+++S W+ + L PC F V + L L QRS D Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEATAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSND 188 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228 + + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248 Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++++N P+ + + EDF L Y+P + +++ Sbjct: 249 RLVLNVPDGTNFFDIKPEDFELVDYDPVKPQLKFDLAI 286 >gi|55820657|ref|YP_139099.1| thymidylate synthase [Streptococcus thermophilus LMG 18311] gi|62901192|sp|Q5M5B3|TYSY_STRT2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|55736642|gb|AAV60284.1| thymidylate synthase [Streptococcus thermophilus LMG 18311] Length = 286 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 24/278 (8%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + +++ G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 ITKIMEEGVWSEQARPKYKDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114 W + +N + + V W++W + P RS G V+ D I+ Sbjct: 72 FWIYQDQTNSLDVLEDKYNVHYWNDWEVEGV---PANNGDKRSIGQRYGAVVKKHDIINR 128 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169 ++ L A+P++RR+++S W+ ++ L PC F V + L L QRS D Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDGTLTQRSND 188 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228 + + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248 Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++++N P+ + + EDF L Y+P + +++ Sbjct: 249 RLVLNVPDETNFFDIKPEDFELVDYDPVKPQLKFDLAI 286 >gi|312866637|ref|ZP_07726851.1| thymidylate synthase [Streptococcus parasanguinis F0405] gi|311097718|gb|EFQ55948.1| thymidylate synthase [Streptococcus parasanguinis F0405] Length = 279 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 130/277 (46%), Gaps = 29/277 (10%) Query: 8 LRHVIKFGS--------DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 +R +++ G + RT ++ G M FDLSKG FP+ T + + KS + E Sbjct: 12 IRKIMEEGVWSEQARPKYKDGRT-ANSKYITGAFMEFDLSKGEFPITTLRPIAIKSAIKE 70 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSI 115 +LW + SN L + V W++W D +G YG + D + I Sbjct: 71 MLWIYQDQSNSLDLLEDKYNVHYWNDWEVGDSRTIGQRYGAVVKKH--------DITNKI 122 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170 ++ L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 123 LKQLEANPWNRRNIISLWDYDAFEETEGLLPCAFQTMFDVRRVDEEIYLDATLTQRSNDM 182 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P Sbjct: 183 LVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPH 242 Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 +++N + + EDF L Y+P + +++ Sbjct: 243 LVLNVADGTSFFDIKPEDFELVDYDPVKPQLKFDLAI 279 >gi|116627466|ref|YP_820085.1| thymidylate synthase [Streptococcus thermophilus LMD-9] gi|122267936|sp|Q03LN3|TYSY_STRTD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116100743|gb|ABJ65889.1| thymidylate synthase [Streptococcus thermophilus LMD-9] gi|312277984|gb|ADQ62641.1| Thymidylate synthase [Streptococcus thermophilus ND03] Length = 286 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 24/278 (8%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + +++ G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 ITKIMEEGVWSEQARPKYKDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114 W + +N + + V W++W + P RS G V+ D I+ Sbjct: 72 FWIYQDQTNSLDVLEDKYNVHYWNDWEVEGV---PANNGDKRSIGQRYGAVVKKHDIINR 128 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169 ++ L A+P++RR+++S W+ ++ L PC F V + L L QRS D Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSND 188 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228 + + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248 Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++++N P+ + + EDF L Y+P + +++ Sbjct: 249 RLVLNVPDETNFFDIKPEDFELVDYDPVKPQLKFDLAI 286 >gi|319758054|gb|ADV69996.1| thymidylate synthase [Streptococcus suis JS14] Length = 279 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +R +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IRKIMEEGVFSENARPRYKDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEI 71 Query: 60 LWFLRGDSN-VSYLHR-HGVSIWDEWADK-DGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + +N +S L +GV W++W + G +G YG + D IS I+ Sbjct: 72 LWIYQDQTNDLSVLQEKYGVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L P++RR+++S W+ D+ L PC F V L L QRS D+ Sbjct: 124 KQLEEKPWNRRNVISLWDYEAFDQSAGLLPCAFQTLFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R+P + P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + R EDF L Y P + +++ Sbjct: 244 VLNVPDGTNFFDIRAEDFELVDYNPVKPQLKFDLAI 279 >gi|306833692|ref|ZP_07466819.1| thymidylate synthase [Streptococcus bovis ATCC 700338] gi|304424462|gb|EFM27601.1| thymidylate synthase [Streptococcus bovis ATCC 700338] Length = 303 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRRDRTGV-------GTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G + V ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 36 IKKIMEEGVFSENARPVYQSGGQANSKYVTGVFAEYDLSKGEFPITTLRPIPIKSAIREI 95 Query: 60 LWFLRGDSN--VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + +N ++ V W++W D G +G YG + D I I+ Sbjct: 96 FWIYQDQTNDLSVLNDKYNVKYWNDWEVDNSGTIGERYGAVVKKH--------DIIRKIL 147 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ + L PC + V L L QRS D+ Sbjct: 148 KQLEENPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDGEIYLDATLTQRSNDML 207 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA LSR P++ Sbjct: 208 VSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRL 267 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ D + EDF L YEP I +++ Sbjct: 268 VLNVPDGTDFFDIKPEDFELVDYEPVKPQIKFDLAI 303 >gi|324992986|gb|EGC24906.1| thymidylate synthase [Streptococcus sanguinis SK405] Length = 279 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLGLLNDKYNVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDVTLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279 >gi|332360752|gb|EGJ38560.1| thymidylate synthase [Streptococcus sanguinis SK355] Length = 279 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + D I I+ Sbjct: 72 LWIYQDQSNSLELLNDKYHVHYWNDWEVGDTGTIGQRYGAVVKKH--------DIIHKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSECQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDETNFFDIKAEDFELLDYDPVKPQLKFDLAI 279 >gi|296876428|ref|ZP_06900480.1| thymidylate synthase [Streptococcus parasanguinis ATCC 15912] gi|296432718|gb|EFH18513.1| thymidylate synthase [Streptococcus parasanguinis ATCC 15912] Length = 279 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 29/277 (10%) Query: 8 LRHVIKFGS--------DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 +R +++ G + RT ++ G M FDL+KG FP+ T + + KS + E Sbjct: 12 IRKIMEEGVWSEQARPKYKDGRT-ANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKE 70 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSI 115 +LW + SN + + V W++W D +G YG + D + I Sbjct: 71 MLWIYQDQSNSLDVLEEKYNVHYWNDWEVGDSRTIGQRYGAVVKKH--------DITNKI 122 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK----LSCQLYQRSGDV 170 ++ L A+P++RR+I++ W+ ++ L PC F V + L L QRS D+ Sbjct: 123 LKQLEANPWNRRNIITLWDYDAFEESEGLLPCAFQTMFDVRRVEGEIYLDATLTQRSNDM 182 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS-PRTLPQ 229 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P+ Sbjct: 183 LVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREATNCQPR 242 Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 +++N P+ + + EDF L Y+P + +++ Sbjct: 243 LVLNVPDGTNFFDIKPEDFELVDYDPVKPQLKFDLAI 279 >gi|323127105|gb|ADX24402.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 279 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 126/265 (47%), Gaps = 26/265 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++ G D ++ G +DL+KG FP+ T + + KS + EL Sbjct: 12 IEKIMDEGVFSEQARPKYKDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKEL 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + +N + +++ V W+EW + +G YG + D IS ++ Sbjct: 72 LWIYQDQTNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAVVKKH--------DIISKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLAENPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVGEDLYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N F QA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRQPTDCQPKL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254 ++N P+ + + EDF L+ YEP Sbjct: 244 VLNVPDGTNFFDIKPEDFELQDYEP 268 >gi|55822548|ref|YP_140989.1| thymidylate synthase [Streptococcus thermophilus CNRZ1066] gi|62901188|sp|Q5M0S7|TYSY_STRT1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|55738533|gb|AAV62174.1| thymidylate synthase [Streptococcus thermophilus CNRZ1066] Length = 286 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 24/278 (8%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + +++ G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 ITKIMEEGVWSEQARPKYKDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114 W + +N + + V W++W + P RS G V+ D I+ Sbjct: 72 FWIYQDQTNSLDVLEDKYNVHYWNDWEVEGV---PANNGDKRSIGQRYGAVVKKHDIINR 128 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169 ++ L A+P++RR+++S W+ ++ L PC F V + L L QRS D Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSND 188 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228 + + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKIGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248 Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++++N P+ + + EDF L Y+P + +++ Sbjct: 249 RLVLNVPDETNFFDIKPEDFELVDYDPVKPQLKFDLAI 286 >gi|327460436|gb|EGF06773.1| thymidylate synthase [Streptococcus sanguinis SK1057] Length = 279 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKILEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIIHKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLCREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 LLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279 >gi|251782256|ref|YP_002996558.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390885|dbj|BAH81344.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 281 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 126/265 (47%), Gaps = 26/265 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++ G D ++ G +DL+KG FP+ T + + KS + EL Sbjct: 14 IEKIMDEGVFSEQARPKYKDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKEL 73 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + +N + +++ V W+EW + +G YG + D IS ++ Sbjct: 74 LWIYQDQTNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAVVKKH--------DIISKLL 125 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 126 KQLAENPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVGEDLYLDATLTQRSNDML 185 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N F QA L R P P++ Sbjct: 186 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRQPTDCQPKL 245 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254 ++N P+ + + EDF L+ YEP Sbjct: 246 VLNVPDGTNFFDIKPEDFELQDYEP 270 >gi|332360702|gb|EGJ38511.1| thymidylate synthase [Streptococcus sanguinis SK49] Length = 279 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I+ I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKIGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279 >gi|125717921|ref|YP_001035054.1| thymidylate synthase [Streptococcus sanguinis SK36] gi|166231740|sp|A3CMU9|TYSY_STRSV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|125497838|gb|ABN44504.1| Thymidylate synthase, putative [Streptococcus sanguinis SK36] gi|324995705|gb|EGC27617.1| thymidylate synthase [Streptococcus sanguinis SK678] gi|328946147|gb|EGG40292.1| thymidylate synthase [Streptococcus sanguinis SK1087] Length = 279 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I+ I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYNPVKPQLKFDLAI 279 >gi|327489635|gb|EGF21427.1| thymidylate synthase [Streptococcus sanguinis SK1058] Length = 279 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRRDRTG-------VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G + ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKNGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I+ I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYNPVKPQLKFDLAI 279 >gi|322385231|ref|ZP_08058878.1| thymidylate synthase [Streptococcus cristatus ATCC 51100] gi|321270855|gb|EFX53768.1| thymidylate synthase [Streptococcus cristatus ATCC 51100] Length = 279 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + D I I+ Sbjct: 72 LWIYQDQSNSLELLNDKYHVHYWNDWEVGDTGTIGQRYGAVVKKH--------DIIHKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N PN + + EDF L +Y+P + +++ Sbjct: 244 VLNVPNGTNFFDIKAEDFELLNYDPVKPQLKFDLAI 279 >gi|327474155|gb|EGF19565.1| thymidylate synthase [Streptococcus sanguinis SK408] Length = 279 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I I+ Sbjct: 72 LWIYQDQSNSLELLNEKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIIHKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFVLLDYDPVKPQLKFDLAI 279 >gi|291167144|gb|EFE29190.1| thymidylate synthase [Filifactor alocis ATCC 35896] Length = 278 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 26/281 (9%) Query: 2 HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51 + +L +++ G + + D T T +DL KG FP+LT + + Sbjct: 6 KNFKELCTRILEEGYNTKGEKVRPKYADGTPSHTYFVNQVWEEYDLQKGEFPILTLRHIA 65 Query: 52 WKSVVHELLWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNV 108 WKS + E+LW + +N + + + W++W + +G YG + + Sbjct: 66 WKSSIKEILWIYQDQTNSLDVLEDKYDIHWWNDWEVEQSRTIGQRYGATVKRY------- 118 Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGKLSCQLYQRS 167 D ++ ++ L+ PY RRHI++ + + L PC + V +G L L QRS Sbjct: 119 -DLMNKLLNGLKTQPYGRRHIINLYQYQDFQETDGLFPCAMETHWSVRDGILDMTLIQRS 177 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 DV + N Y L MM+A F+ G+F H + + H+Y+ H EQ L R + Sbjct: 178 SDVPVANAINKLQYVALMMMVAKHCDFKLGKFCHLVQNAHIYDRHVEQVKEMLERKGQED 237 Query: 228 PQ---MIINPNIVDLLSFRYEDFTLRSYEPH-AAILAKVSV 264 ++++ + D +F EDF L +YEP+ ++++ Sbjct: 238 CTDLRLVLDTDKTDFYTFTLEDFKLENYEPNKPNFKFELAI 278 >gi|322411591|gb|EFY02499.1| thymidylate synthase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 279 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 26/265 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++ G D ++ G +DL+KG FP+ T + + +S + EL Sbjct: 12 IEKIMDEGVFSEQARPKYKDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIQSAIKEL 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + +N + +++ V W+EW + +G YG + D IS ++ Sbjct: 72 LWIYQDQTNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAVVKKH--------DIISKLL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK----LSCQLYQRSGDVF 171 + L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLSENPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVEENLYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N F QA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRHPTDCQPKL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254 ++N P+ + + EDF L+ YEP Sbjct: 244 VLNVPDGTNFFDIKPEDFELQDYEP 268 >gi|171778303|ref|ZP_02919509.1| hypothetical protein STRINF_00351 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283003|gb|EDT48427.1| hypothetical protein STRINF_00351 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 279 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 127/276 (46%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRRD-------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ ++ G + ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMDEGVFSENARPVYQSGRQANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREI 71 Query: 60 LWFLRGDSN--VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + +N ++ V W++W D G +G YG + D I I+ Sbjct: 72 FWIYQDQTNDLSVLNDKYNVKYWNDWEVDGTGTIGERYGAVVKKH--------DIIRKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ + L PC + V + L L QRS D+ Sbjct: 124 KQLEENPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPTDCKPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ D + EDF L Y+ + +++ Sbjct: 244 VLNVPDGTDFFDIKPEDFELVDYDSVKPQLKFDLAI 279 >gi|325689776|gb|EGD31780.1| thymidylate synthase [Streptococcus sanguinis SK115] gi|325696424|gb|EGD38314.1| thymidylate synthase [Streptococcus sanguinis SK160] Length = 279 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I+ I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFEFLDYDPVKPQLKFDLAI 279 >gi|322389617|ref|ZP_08063165.1| thymidylate synthase [Streptococcus parasanguinis ATCC 903] gi|321143616|gb|EFX39046.1| thymidylate synthase [Streptococcus parasanguinis ATCC 903] Length = 279 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 131/277 (47%), Gaps = 29/277 (10%) Query: 8 LRHVIKFGS--------DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 +R +++ G + RT ++ G M FDL+KG FP+ T + + KS + E Sbjct: 12 IRKIMEEGVWSEQARPKYKDGRT-ANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKE 70 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSI 115 +LW + SN + + V W++W + +G YG + D + I Sbjct: 71 MLWIYQDQSNRLDVLEDKYNVHYWNDWEVGNSRTIGQRYGAVVKKH--------DITNKI 122 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170 ++ L +P++RR+I+S W+ ++ L PC F V L L QRS D+ Sbjct: 123 LKQLEDNPWNRRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDM 182 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P Sbjct: 183 LVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPH 242 Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 +++N P+ + + EDF L Y+P + +++ Sbjct: 243 LVLNVPDGTNFFDIKPEDFELVDYDPVKPQLKFDLAI 279 >gi|288905459|ref|YP_003430681.1| thymidylate synthase [Streptococcus gallolyticus UCN34] gi|306831541|ref|ZP_07464699.1| thymidylate synthase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732185|emb|CBI13750.1| thymidylate synthase [Streptococcus gallolyticus UCN34] gi|304426326|gb|EFM29440.1| thymidylate synthase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 279 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRRDRTGV-------GTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G + V ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEEGVFSENARPVYQSGGQANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREI 71 Query: 60 LWFLRGDSN--VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + +N ++ V W++W D G +G YG + D I I+ Sbjct: 72 FWIYQDQTNDLSVLNDKYNVKYWNDWEVDNSGTIGERYGAVVKKH--------DIIRKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ + L PC + V L L QRS D+ Sbjct: 124 KQLEENPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA LSR P++ Sbjct: 184 VSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ D + EDF L YEP + +++ Sbjct: 244 VLNVPDGTDFFDIKPEDFELVDYEPVKPQLKFDLAI 279 >gi|320546911|ref|ZP_08041213.1| thymidylate synthase [Streptococcus equinus ATCC 9812] gi|320448429|gb|EFW89170.1| thymidylate synthase [Streptococcus equinus ATCC 9812] Length = 295 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 26/265 (9%) Query: 8 LRHVIKFGSDRRDRTGV-------GTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ ++ G + V ++ G +DLS+G FP+ T + + KS + E+ Sbjct: 28 IKKIMDEGVFSENARPVYQSGGQANSKYVTGAFAEYDLSRGEFPITTLRPIPIKSAIREI 87 Query: 60 LWFLRGDSN--VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + +N ++ V W++W D G +G YG + D I I+ Sbjct: 88 FWIYQDQTNDLSVLNDKYNVKYWNDWEVDGTGTIGERYGAVVKKH--------DIIRKIL 139 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L A+P++RR+++S W+ + L PC + V + L L QRS D+ Sbjct: 140 KQLEANPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDGDIYLDATLTQRSNDML 199 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 200 VSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAKELLRREPTDCKPRL 259 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254 ++N P+ D + EDF L Y+P Sbjct: 260 VLNVPDGTDFFDIKPEDFELVDYDP 284 >gi|327470119|gb|EGF15583.1| thymidylate synthase [Streptococcus sanguinis SK330] Length = 279 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I+ I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT-LPQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCYPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFDLLDYNPVKPQLKFDLAI 279 >gi|325978449|ref|YP_004288165.1| thymidylate synthase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178377|emb|CBZ48421.1| thyA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 279 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRRDRTGV-------GTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G + V ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEEGVFSENARPVYQSGGQANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREI 71 Query: 60 LWFLRGDSN--VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + +N ++ V W++W D G +G YG + D I I+ Sbjct: 72 FWIYQDQTNDLSVLNDKYNVKYWNDWEVDNSGTIGERYGAVVKKH--------DIIRKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYV----DNGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ + L PC + V D L L QRS D+ Sbjct: 124 KQLEENPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDDEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA LSR P++ Sbjct: 184 VSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ D + EDF L YEP + +++ Sbjct: 244 VLNVPDGTDFFDIKPEDFELVDYEPVKPQLKFDLAI 279 >gi|324991230|gb|EGC23164.1| thymidylate synthase [Streptococcus sanguinis SK353] Length = 296 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 29 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 88 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I+ I+ Sbjct: 89 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 140 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 141 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 200 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L +M+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 201 VAHHINAMQYVALQIMIAKHFGWKIGKFFYFINNLHIYDNQFEQAEELLCREPSDCHPRL 260 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 261 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 296 >gi|309797905|ref|ZP_07692286.1| thymidylate synthase [Escherichia coli MS 145-7] gi|308118513|gb|EFO55775.1| thymidylate synthase [Escherichia coli MS 145-7] Length = 316 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 93/310 (30%), Positives = 134/310 (43%), Gaps = 87/310 (28%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW 101 PL++ K V+ K ++ EL W+L+G N+ +L +GV IWD WAD++G+LGP+YG QWR W Sbjct: 7 VPLISGKAVNLKPLLVELEWYLKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRW 66 Query: 102 PDYD----------------------------------GNVIDQISSIVQSLRADPYSRR 127 D IDQ+ IV +LR +P RR Sbjct: 67 EDTRIVSHSEYLSKIATFRERGYKVEGYLGISEDRVVLSREIDQLQRIVDTLRMNPTDRR 126 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFY---------------------------------- 153 +++AWNV ++ M LPPCH +F + Sbjct: 127 IMLNAWNVGELEDMKLPPCHFVFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLY 186 Query: 154 -----------------VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196 + L+ L QRS D F+G+PFNIA Y +LT LA + G Sbjct: 187 DLEIDGSVTEAELDELGIPKRILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMA 246 Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRS--PRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254 G F+H DVHLYNNH E + R + P +I +L F++++ + Y P Sbjct: 247 GAFVHFGFDVHLYNNHMEGVCELMQRQAPEHSDPVVIFPNEWSELDDFKWDEILILGYAP 306 Query: 255 HAAILAKVSV 264 I V+V Sbjct: 307 LPWIKVPVAV 316 >gi|325694584|gb|EGD36493.1| thymidylate synthase [Streptococcus sanguinis SK150] Length = 279 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D +G YG + + I I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTCTIGQRYGAVVKKH--------NIIHKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279 >gi|325687392|gb|EGD29413.1| thymidylate synthase [Streptococcus sanguinis SK72] Length = 279 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I+ I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFDLLDYNPVKPQLKFDLAI 279 >gi|332361331|gb|EGJ39135.1| thymidylate synthase [Streptococcus sanguinis SK1056] Length = 279 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I+ I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N F+QA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKIGKFFYFINNLHIYDNQFKQAEELLRREPSDCQPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFDLLDYDPVKPQLKFDLAI 279 >gi|323351648|ref|ZP_08087302.1| thymidylate synthase [Streptococcus sanguinis VMC66] gi|322122134|gb|EFX93860.1| thymidylate synthase [Streptococcus sanguinis VMC66] Length = 279 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFTEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I I+ Sbjct: 72 LWIYQDQSNSLELLNDKYHVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIIHKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L Y P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYNPVKPQLKFDLAI 279 >gi|332366635|gb|EGJ44378.1| thymidylate synthase [Streptococcus sanguinis SK1059] Length = 279 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN L ++ V W++W D G +G YG + + I I+ Sbjct: 72 LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIIHKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 Q L A+P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N + + + EDF L Y+P + +++ Sbjct: 244 VLNVSDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279 >gi|24379388|ref|NP_721343.1| thymidylate synthase [Streptococcus mutans UA159] gi|62901374|sp|Q8DUI4|TYSY_STRMU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|24377318|gb|AAN58649.1|AE014935_1 thymidylate synthase [Streptococcus mutans UA159] Length = 279 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ ++ G + ++ G +DL+KG FP+ T + + KS + E+ Sbjct: 12 IKKILTDGVWSEQARPKYKNGKTANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + +N + ++GV W++W K G +G YG + D ++ I+ Sbjct: 72 FWIYQDQTNELAILNDKYGVRYWNDWEVKQTGTIGERYGAIVKKH--------DIMNKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK----LSCQLYQRSGDVF 171 + L +P++RR+++S W+ +K L PC F V K L L QRS D+ Sbjct: 124 KQLEENPWNRRNVISLWDYEAFEKTEGLLPCAFQIMFDVRRVKGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P + Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPVVCQPHL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N PN + + EDF L YEP + +++ Sbjct: 244 VLNVPNKTNFFDIKPEDFELLDYEPVKPQLKFDLAI 279 >gi|56808901|ref|ZP_00366610.1| COG0207: Thymidylate synthase [Streptococcus pyogenes M49 591] gi|94990255|ref|YP_598355.1| thymidylate synthase [Streptococcus pyogenes MGAS10270] gi|94994176|ref|YP_602274.1| thymidylate synthase [Streptococcus pyogenes MGAS10750] gi|50903125|gb|AAT86840.1| Thymidylate synthase [Streptococcus pyogenes MGAS10394] gi|71802428|gb|AAX71781.1| thymidylate synthase [Streptococcus pyogenes MGAS6180] gi|94543763|gb|ABF33811.1| Thymidylate synthase [Streptococcus pyogenes MGAS10270] gi|94547684|gb|ABF37730.1| Thymidylate synthase [Streptococcus pyogenes MGAS10750] Length = 287 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 28/266 (10%) Query: 8 LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 ++ +I G + RT ++ G +DL+KG FP+ T + + KS + E Sbjct: 20 IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 78 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 L W + SN + + V W+EW D+ +G YG + D IS I Sbjct: 79 LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 130 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170 ++ L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 131 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 190 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229 + N Y L MM+A G++ G+F + + ++H+Y+N F+QA L R P P+ Sbjct: 191 LVAHHINAMQYVALQMMIAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 250 Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254 +++N P+ + + +DF L++Y+P Sbjct: 251 LVLNVPDGTNFFDIKPDDFELQNYDP 276 >gi|21904330|gb|AAM79208.1| putative thymidylate synthase [Streptococcus pyogenes MGAS315] Length = 287 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 28/266 (10%) Query: 8 LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 ++ +I G + RT ++ G +DL+KG FP+ T + + KS + E Sbjct: 20 IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 78 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 L W + SN + + V W+EW D+ +G YG + D IS I Sbjct: 79 LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 130 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170 ++ L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 131 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 190 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229 + N Y L MM+A G++ G+F + + ++H+Y+N F+QA L R P P+ Sbjct: 191 LVAHHINAMQYVALQMMIAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 250 Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254 +++N P+ + + +DF L++Y+P Sbjct: 251 LVLNVPDRTNFFDIKPDDFELQNYDP 276 >gi|306827521|ref|ZP_07460804.1| thymidylate synthase [Streptococcus pyogenes ATCC 10782] gi|304430319|gb|EFM33345.1| thymidylate synthase [Streptococcus pyogenes ATCC 10782] Length = 287 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 28/266 (10%) Query: 8 LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 ++ +I G + RT ++ G +DL+KG FP+ T + + KS + E Sbjct: 20 IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 78 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 L W + SN + + V W+EW D+ +G YG + D IS I Sbjct: 79 LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 130 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170 ++ L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 131 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 190 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229 + N Y L MM+A G++ G+F + + ++H+Y+N F+QA L R P P+ Sbjct: 191 LVAHHINAMQYVALQMMIAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 250 Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254 +++N P+ + + +DF L++Y+P Sbjct: 251 LVLNVPDRTNFFDIKPDDFELQNYDP 276 >gi|19745950|ref|NP_607086.1| thymidylate synthase [Streptococcus pyogenes MGAS8232] gi|139473953|ref|YP_001128669.1| thymidylate synthase [Streptococcus pyogenes str. Manfredo] gi|161761315|ref|YP_060023.2| thymidylate synthase [Streptococcus pyogenes MGAS10394] gi|162139405|ref|YP_280136.2| thymidylate synthase [Streptococcus pyogenes MGAS6180] gi|209559235|ref|YP_002285707.1| thymidylate synthase [Streptococcus pyogenes NZ131] gi|25091466|sp|Q8P1D1|TYSY_STRP8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|62901240|sp|Q5XCM3|TYSY_STRP6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|166231738|sp|A2RF20|TYSY_STRPG RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172046110|sp|Q48U25|TYSY_STRPM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172046224|sp|Q1JHC5|TYSY_STRPD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172046751|sp|Q1J744|TYSY_STRPF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|19748109|gb|AAL97585.1| putative thymidylate synthase [Streptococcus pyogenes MGAS8232] gi|134272200|emb|CAM30446.1| thymidylate synthase [Streptococcus pyogenes str. Manfredo] gi|209540436|gb|ACI61012.1| Thymidylate synthase [Streptococcus pyogenes NZ131] Length = 279 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 28/266 (10%) Query: 8 LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 ++ +I G + RT ++ G +DL+KG FP+ T + + KS + E Sbjct: 12 IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 70 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 L W + SN + + V W+EW D+ +G YG + D IS I Sbjct: 71 LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 122 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170 ++ L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 123 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 182 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229 + N Y L MM+A G++ G+F + + ++H+Y+N F+QA L R P P+ Sbjct: 183 LVAHHINAMQYVALQMMIAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 242 Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254 +++N P+ + + +DF L++Y+P Sbjct: 243 LVLNVPDGTNFFDIKPDDFELQNYDP 268 >gi|33620591|ref|NP_891806.1| dTMP (thymidylate) synthase [Enterobacteria phage RB49] gi|33348058|gb|AAQ15459.1| dTMP (thymidylate) synthase [Enterobacteria phage RB49] Length = 410 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 65/158 (41%), Positives = 96/158 (60%), Gaps = 4/158 (2%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++++ ++ +P RR I+ +WNV L CH QFYV+ GKLSC +QRS D Sbjct: 254 DQLQNVIEQIKNNPTDRRIIIDSWNVQGTHNAVLGVCHPFVQFYVNEGKLSCMWFQRSVD 313 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 FLG+PFN+ASY+LLT ++A + + GE I + GD H+Y NHF+Q QLSR P P Sbjct: 314 SFLGLPFNVASYALLTHIIAKMCDLEVGELIFSGGDTHIYKNHFDQVMEQLSRVPFDKPT 373 Query: 230 MIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKVSV 264 + + P L +DF + +Y+ H AI A+++V Sbjct: 374 IEL-PEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 410 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 19/133 (14%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL LLR V+ G R DRTGVGT S FG +MR DLSKGFPLLTTKK+ SV+ ELL Sbjct: 1 MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATASVIGELL 60 Query: 61 WFLRGDSNVSYLH--------RHGVSIWDEWADKDGE----------LGPIYGVQWRSWP 102 WF+ G + L IW E +G +YG+ WR P Sbjct: 61 WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMAWRRKP 120 Query: 103 DYDGNVIDQISSI 115 + I +I + Sbjct: 121 IHPHGEI-KIKRV 132 >gi|15674907|ref|NP_269081.1| thymidylate synthase [Streptococcus pyogenes M1 GAS] gi|28896164|ref|NP_802514.1| thymidylate synthase [Streptococcus pyogenes SSI-1] gi|71910501|ref|YP_282051.1| thymidylate synthase [Streptococcus pyogenes MGAS5005] gi|161485748|ref|NP_664405.2| thymidylate synthase [Streptococcus pyogenes MGAS315] gi|54039800|sp|P67052|TYSY_STRP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|54042285|sp|P67051|TYSY_STRP1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|13622048|gb|AAK33802.1| putative thymidylate synthase [Streptococcus pyogenes M1 GAS] gi|28811414|dbj|BAC64347.1| putative thymidylate synthase [Streptococcus pyogenes SSI-1] gi|71853283|gb|AAZ51306.1| thymidylate synthase [Streptococcus pyogenes MGAS5005] Length = 279 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 28/266 (10%) Query: 8 LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 ++ +I G + RT ++ G +DL+KG FP+ T + + KS + E Sbjct: 12 IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 70 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 L W + SN + + V W+EW D+ +G YG + D IS I Sbjct: 71 LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 122 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170 ++ L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 123 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 182 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229 + N Y L MM+A G++ G+F + + ++H+Y+N F+QA L R P P+ Sbjct: 183 LVAHHINAMQYVALQMMIAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 242 Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254 +++N P+ + + +DF L++Y+P Sbjct: 243 LVLNVPDRTNFFDIKPDDFELQNYDP 268 >gi|319939274|ref|ZP_08013637.1| thymidylate synthase [Streptococcus anginosus 1_2_62CV] gi|319811670|gb|EFW07946.1| thymidylate synthase [Streptococcus anginosus 1_2_62CV] Length = 279 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRRD-------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +R ++ G + ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IRKILTEGVFSENARPRYKNGKVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + + V W++W D +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLDILEEKYNVHYWNDWEVGDTRTIGLRYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLEINPWNRRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT-LPQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P LP++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPTDCLPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + E+F L Y P + +++ Sbjct: 244 VLNVPDGTNFFDIKAENFELVDYIPVKPQLKFDLAI 279 >gi|290580609|ref|YP_003485001.1| thymidylate synthase [Streptococcus mutans NN2025] gi|254997508|dbj|BAH88109.1| thymidylate synthase [Streptococcus mutans NN2025] Length = 279 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ ++ G + ++ G +DL+KG FP+ T + + KS + E+ Sbjct: 12 IKKILTDGVWSEQARPKYKNGKTANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + +N + ++GV W++W K G +G YG + D ++ I+ Sbjct: 72 FWIYQDQTNELAILNDKYGVRYWNDWEVKQTGTIGERYGAIVKKH--------DIMNKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ +K L PC F V L L QRS D+ Sbjct: 124 KQLEENPWNRRNVISLWDYEAFEKTEGLLPCAFQTMFDVRRVNGEIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P + Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPVVCQPHL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N PN + + EDF L YEP + +++ Sbjct: 244 VLNVPNKTNFFDIKPEDFELLDYEPVKPQLKFDLAI 279 >gi|291529718|emb|CBK95304.1| Thymidylate synthase [Eubacterium rectale M104/1] Length = 290 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 82/277 (29%), Positives = 123/277 (44%), Gaps = 30/277 (10%) Query: 4 YLDL-LRHVIKFGSDR-------RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKS 54 Y L L ++K G+ D T S ++DLSKG P+ T + + WKS Sbjct: 11 YHKLVLNKILKEGTLDINPRPHYSDGLPAHTYSINHIMQQYDLSKGECPVETLRPIAWKS 70 Query: 55 VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 V E+LW + SN ++ LH G+ WD+W DG +G YG + + ++ Sbjct: 71 AVKEILWIYQMQSNKINDLHEMGIKYWDDWDIGDGTIGCRYGATVKRH--------NLMN 122 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDK------MALPPCHCLFQFYVDNGK----LSCQL 163 ++ L+ DP+ RRHI++ W L PC + V G+ L + Sbjct: 123 KLLNGLKQDPFGRRHIMNMWQEDDFSDETGGTTKGLNPCCYETIWNVRWGEDGLYLDMLM 182 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 QRS D + N Y L +M+A V GF+ G F H + +V +Y+ H L+R Sbjct: 183 NQRSSDYEISCAINELQYIALQLMVAKVCGFKPGMFTHVIENVQIYDRHVNNVKTLLTRE 242 Query: 224 P-RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259 R PQ+I+N + D F +DF L Y P I Sbjct: 243 SVRCCPQLILNTDKTDFYKFTIDDFVLTDY-PVDKIK 278 >gi|94988375|ref|YP_596476.1| thymidylate synthase [Streptococcus pyogenes MGAS9429] gi|94992257|ref|YP_600356.1| thymidylate synthase [Streptococcus pyogenes MGAS2096] gi|94541883|gb|ABF31932.1| thymidylate synthase [Streptococcus pyogenes MGAS9429] gi|94545765|gb|ABF35812.1| Thymidylate synthase [Streptococcus pyogenes MGAS2096] Length = 287 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 28/266 (10%) Query: 8 LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 ++ +I G + RT ++ G +DL+KG FP+ T + + KS + E Sbjct: 20 IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 78 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 L W + SN + + V W+EW D+ +G YG + D IS I Sbjct: 79 LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 130 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170 ++ L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 131 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 190 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229 + N Y L MM A G++ G+F + + ++H+Y+N F+QA L R P P+ Sbjct: 191 LVAHHINAMQYVALQMMFAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 250 Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254 +++N P+ + + +DF L++Y+P Sbjct: 251 LVLNVPDGTNFFDIKPDDFELQNYDP 276 >gi|157311536|ref|YP_001469579.1| Td dTMP (thymidylate) synthase [Enterobacteria phage Phi1] gi|149380740|gb|ABR24745.1| Td dTMP (thymidylate) synthase [Enterobacteria phage Phi1] Length = 406 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 65/158 (41%), Positives = 96/158 (60%), Gaps = 4/158 (2%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQ+ ++++ ++ +P RR I+ +WNV L CH QFYV+ GKLSC +QRS D Sbjct: 250 DQLQNVIEQIKNNPTDRRIIIDSWNVQGTHNAVLGVCHPFVQFYVNEGKLSCMWFQRSVD 309 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 FLG+PFN+ASY+LLT ++A + + GE I + GD H+Y NHF+Q QLSR P P Sbjct: 310 SFLGLPFNVASYALLTHIIAKMCDLEVGELIFSGGDTHIYKNHFDQVMEQLSRVPFDKPT 369 Query: 230 MIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKVSV 264 + + P L +DF + +Y+ H AI A+++V Sbjct: 370 IEL-PEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 406 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 19/133 (14%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL LLR V+ G R DRTGVGT S FG +MR DLSKGFPLLTTKK+ SV+ ELL Sbjct: 1 MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATSSVIGELL 60 Query: 61 WFLRGDSNVSYLH--------RHGVSIWDEWADKDGE----------LGPIYGVQWRSWP 102 WF+ G + L IW E +G +YG+ WR P Sbjct: 61 WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMSWRRKP 120 Query: 103 DYDGNVIDQISSI 115 + I +I + Sbjct: 121 IHPHGEI-KIKRV 132 >gi|172046221|sp|Q1JM80|TYSY_STRPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|172046745|sp|Q1JC96|TYSY_STRPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase Length = 279 Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 28/266 (10%) Query: 8 LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 ++ +I G + RT ++ G +DL+KG FP+ T + + KS + E Sbjct: 12 IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 70 Query: 59 LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115 L W + SN + + V W+EW D+ +G YG + D IS I Sbjct: 71 LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 122 Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170 ++ L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 123 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 182 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229 + N Y L MM A G++ G+F + + ++H+Y+N F+QA L R P P+ Sbjct: 183 LVAHHINAMQYVALQMMFAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 242 Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254 +++N P+ + + +DF L++Y+P Sbjct: 243 LVLNVPDGTNFFDIKPDDFELQNYDP 268 >gi|125623803|ref|YP_001032286.1| thymidylate synthase [Lactococcus lactis subsp. cremoris MG1363] gi|18539502|gb|AAL74419.1|AF462070_1 thymidylate synthase [Lactococcus lactis subsp. cremoris MG1363] gi|149513|gb|AAA25221.1| thymidylate synthase (EC 2.1.1.45) [Lactococcus lactis] gi|124492611|emb|CAL97556.1| ThyA protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070573|gb|ADJ59973.1| thymidylate synthase [Lactococcus lactis subsp. cremoris NZ9000] Length = 279 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +++++ G D ++ G + +DL KG FP+ T + + KS + EL Sbjct: 12 IQNILDNGVFSENARPKYKDGQMANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKEL 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 +W + ++ + +GV W EW DG +G YG + + + I +++ Sbjct: 72 MWIYQDQTSELSVLEEKYGVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLE 123 Query: 118 SLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVF 171 L +P++RR+I++ W ++ L PC F V K L L QRS D+ Sbjct: 124 GLAKNPWNRRNIINLWQYEDFEETEGLLPCAFQTMFDVRREKDGQIYLDATLIQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A ++ G+F + + ++H+Y+N FEQA+ + R+ P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKVGKFFYFVNNLHIYDNQFEQANELMKRTASEKEPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L YEP + +++ Sbjct: 244 VLNVPDGTNFFDIKPEDFELVDYEPVKPQLKFDLAI 279 >gi|116512335|ref|YP_809551.1| thymidylate synthase [Lactococcus lactis subsp. cremoris SK11] gi|123125483|sp|Q02Y43|TYSY_LACLS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|116107989|gb|ABJ73129.1| thymidylate synthase [Lactococcus lactis subsp. cremoris SK11] Length = 279 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +++++ G D ++ G + +DL KG FP+ T + + KS + EL Sbjct: 12 IQNILDNGVFSENARPKYKDGQMANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKEL 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 +W + ++ + +GV W EW DG +G YG + + + I +++ Sbjct: 72 MWIYQDQTSELSVLEEKYGVKYWGEWRIGDGTIGQRYGATVKKY--------NIIGKLLE 123 Query: 118 SLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVF 171 L +P++RR+I++ W ++ L PC F V K L L QRS D+ Sbjct: 124 GLAKNPWNRRNIINLWQYEDFEETEGLLPCAFQTMFDVRREKDGQIYLDATLIQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A ++ G+F + + ++H+Y+N FEQA+ + R+ P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKVGKFFYFVNNLHIYDNQFEQANELMKRTASEKEPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L YEP + +++ Sbjct: 244 VLNVPDGTNFFDIKPEDFELVDYEPVKPQLKFDLAI 279 >gi|315221690|ref|ZP_07863606.1| thymidylate synthase [Streptococcus anginosus F0211] gi|315189177|gb|EFU22876.1| thymidylate synthase [Streptococcus anginosus F0211] Length = 279 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRRD-------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +R ++ G + ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 IRKILHEGVFSENARPRYKNGKVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + + V W++W D +G YG + D I+ I+ Sbjct: 72 LWIYQDQSNSLDILEEKYNVHYWNDWEVGDTRTIGLRYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+I+S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLEINPWNRRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAKELLRREPTNCTPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + E F L Y+P + +++ Sbjct: 244 VLNVPDGTNFFDIKAEYFELVDYDPVKPQLKFDLAI 279 >gi|329117733|ref|ZP_08246450.1| thymidylate synthase [Streptococcus parauberis NCFD 2020] gi|326908138|gb|EGE55052.1| thymidylate synthase [Streptococcus parauberis NCFD 2020] Length = 279 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 27/278 (9%) Query: 6 DLLRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57 D ++ +++ G D ++ G +DLSKG FP+ T + + KS + Sbjct: 10 DNIQKIMEQGVYSEQARPKYKDGKTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIK 69 Query: 58 ELLWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISS 114 ELLW + SN + + V W++W D +G YG + D I+ Sbjct: 70 ELLWIYQDQSNSLDILEEKYNVHYWNDWEVGDTRTIGQRYGAVVKKH--------DIINK 121 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDN----GKLSCQLYQRSGD 169 I++ L +P++RR+++S W+ ++ L PC F V L L QRS D Sbjct: 122 ILKQLEDNPWNRRNVISLWDYQAFEESEGLLPCAFQTMFDVRRVDGTIYLDATLVQRSND 181 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT-LP 228 + + N Y L MM+A G++ G+F + + ++H+Y+N F QA+ L R +P Sbjct: 182 MLVAHHINAMQYVALQMMVAKHFGWKVGKFFYFINNLHIYDNQFPQAEELLRRKESDCMP 241 Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 Q+++N P+ + + EDF L Y P + +++ Sbjct: 242 QLMLNVPDGTNFFDIKAEDFELIDYSPVKPQLKFDLAI 279 >gi|326407008|gb|ADZ64079.1| thymidylate synthase [Lactococcus lactis subsp. lactis CV56] Length = 279 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +++++ G D ++ G + +DL KG FP+ T + + KS + EL Sbjct: 12 IQNILDNGVFSENARPKYKDGQTANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKEL 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 +W + ++ + +GV W EW DG +G YG + + + I ++ Sbjct: 72 MWIYQDQTSELAILEEKYGVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLD 123 Query: 118 SLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVF 171 L +P++RR+I++ W ++ L PC F V + L L QRS D+ Sbjct: 124 GLAKNPWNRRNIINLWQYEDFEETEGLLPCAFQTMFDVRCEQDGQIYLDATLIQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A ++ G+F + + ++H+Y+N FEQA+ + R+ P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKVGKFFYFVNNLHIYDNQFEQANELVKRTASDKEPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L YEP + +++ Sbjct: 244 VLNVPDGTNFFDIKPEDFELVDYEPVKPQLKFDLAI 279 >gi|310659774|ref|YP_003937495.1| thymidylate synthase (ts) (tsase) [Clostridium sticklandii DSM 519] gi|308826552|emb|CBH22590.1| Thymidylate synthase (TS) (TSase) [Clostridium sticklandii] Length = 277 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 119/265 (44%), Gaps = 24/265 (9%) Query: 6 DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSV 55 DL +I G+ D T T +D+SKG FPL+T + + WKS Sbjct: 10 DLCTRIINEGTSTDGEKVRPVYKDNTPSHTLFVTQVFEEYDISKGEFPLITYRPISWKSA 69 Query: 56 VHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 V E+LW + ++ + ++ + WDEW DG +G YG + + D ++ Sbjct: 70 VKEILWIYQDQTSSLNVLKEKYDIHWWDEWNIGDGTIGQRYGATVKKY--------DLVN 121 Query: 114 SIVQSLRADPYSRRHIVSAWNVAL-IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 +++SL+ PY RRHI++ + ++ L PC + V L L QRS DV + Sbjct: 122 KLLKSLKEIPYGRRHIINLYQYEDFLETDGLYPCAMETHWSVRGDFLDVTLIQRSSDVAV 181 Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS---PRTLPQ 229 N Y+ L MM+A +G G+ H + + H+Y+ H + L R + P Sbjct: 182 ANCINKIQYTALLMMVARHVGLSPGKLCHYVHNAHIYDRHIDDVISLLKRDVGKEISHPS 241 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEP 254 +I+N D +F DF L Y P Sbjct: 242 LILNSQKTDFYNFTINDFDLIDYNP 266 >gi|15673523|ref|NP_267697.1| thymidylate synthase [Lactococcus lactis subsp. lactis Il1403] gi|281492105|ref|YP_003354085.1| thymidylate synthase [Lactococcus lactis subsp. lactis KF147] gi|13638515|sp|P19368|TYSY_LACLA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|12724542|gb|AAK05639.1|AE006385_1 thymidylate synthase [Lactococcus lactis subsp. lactis Il1403] gi|13310416|gb|AAK18280.1|AF336368_1 thymidylate synthase [Lactococcus lactis subsp. lactis] gi|281375788|gb|ADA65285.1| Thymidylate synthase [Lactococcus lactis subsp. lactis KF147] Length = 279 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 +++++ G D ++ G + +DL KG FP+ T + + KS + EL Sbjct: 12 IQNILDNGVFSENARPKYKDGQTANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKEL 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 +W + ++ + +GV W EW DG +G YG + + + I ++ Sbjct: 72 MWIYQDQTSELAILEEKYGVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLD 123 Query: 118 SLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVF 171 L +P++RR+I++ W ++ L PC F V + L L QRS D+ Sbjct: 124 GLAKNPWNRRNIINLWQYEDFEETEGLLPCAFQTMFDVRREQDGQIYLDATLIQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A ++ G+F + + ++H+Y+N FEQA+ + R+ P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKVGKFFYFVNNLHIYDNQFEQANELVKRTASDKEPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 ++N P+ + + EDF L YEP + +++ Sbjct: 244 VLNVPDGTNFFDIKPEDFELVDYEPVKPQLKFDLAI 279 >gi|218678176|ref|ZP_03526073.1| thymidylate synthase [Rhizobium etli CIAT 894] Length = 130 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 80/119 (67%), Positives = 102/119 (85%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL Sbjct: 1 MKQYLDLLAHVMEKGSDRGDRTGTGTRSVFGYQMRFDLQEGFPVLTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119 WFL+GD+N+ YL +GVSIWDEWAD++G+LGP+YG QWRSWP DG +DQI+++V+ + Sbjct: 61 WFLKGDTNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHVDQIANLVKGI 119 >gi|25011427|ref|NP_735822.1| thymidylate synthase [Streptococcus agalactiae NEM316] gi|76787961|ref|YP_329956.1| thymidylate synthase [Streptococcus agalactiae A909] gi|77411173|ref|ZP_00787525.1| thymidylate synthase [Streptococcus agalactiae CJB111] gi|77414071|ref|ZP_00790240.1| thymidylate synthase [Streptococcus agalactiae 515] gi|62901376|sp|Q8E4L6|TYSY_STRA3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|123601631|sp|Q3K0J7|TYSY_STRA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|24412965|emb|CAD47044.1| thymidylate synthase [Streptococcus agalactiae NEM316] gi|76563018|gb|ABA45602.1| thymidylate synthase [Streptococcus agalactiae A909] gi|77159869|gb|EAO71011.1| thymidylate synthase [Streptococcus agalactiae 515] gi|77162791|gb|EAO73750.1| thymidylate synthase [Streptococcus agalactiae CJB111] Length = 279 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 26/267 (9%) Query: 6 DLLRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57 D + ++ G + ++ G +DLSKG FP+ T + + KS + Sbjct: 10 DNITKIMSEGVFSEQARPRYKNGEMANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIK 69 Query: 58 ELLWFLRGDSN--VSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISS 114 E+ W + +N V ++GV+ W++W G +G YG + + IS Sbjct: 70 EIFWIYQDQTNDLVVLNDKYGVTYWNDWEVGHTGTIGQRYGAVVKKH--------NIISK 121 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD--NGKLSC--QLYQRSGD 169 +++ L +P++RR+++S W+ ++ L PC F V NG+L L QRS D Sbjct: 122 LLKQLEDNPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVNGELYLDATLTQRSND 181 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228 + + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P Sbjct: 182 MLVAHHINAMQYVALQMMIAKHFGWRVGKFFYFINNLHIYDNQFEQAQELLKRQPSECNP 241 Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP 254 ++++N P+ D + +DF L Y+P Sbjct: 242 KLVLNVPDGTDFFDIKPDDFALVDYDP 268 >gi|22537462|ref|NP_688313.1| thymidylate synthase [Streptococcus agalactiae 2603V/R] gi|76798605|ref|ZP_00780833.1| thymidylate synthase [Streptococcus agalactiae 18RS21] gi|77409178|ref|ZP_00785890.1| thymidylate synthase [Streptococcus agalactiae COH1] gi|62901375|sp|Q8DZ07|TYSY_STRA5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|22534340|gb|AAN00186.1|AE014252_9 thymidylate synthase [Streptococcus agalactiae 2603V/R] gi|76586039|gb|EAO62569.1| thymidylate synthase [Streptococcus agalactiae 18RS21] gi|77172224|gb|EAO75381.1| thymidylate synthase [Streptococcus agalactiae COH1] gi|319745294|gb|EFV97612.1| thymidylate synthase [Streptococcus agalactiae ATCC 13813] Length = 279 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 26/267 (9%) Query: 6 DLLRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57 D + ++ G + ++ G +DLSKG FP+ T + + KS + Sbjct: 10 DNITKIMSEGVFSEQARPRYKNGEMANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIK 69 Query: 58 ELLWFLRGDSN--VSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISS 114 E+ W + +N ++GV+ W++W G +G YG + + IS Sbjct: 70 EIFWIYQDQTNDLAVLNDKYGVTYWNDWEVGHTGTIGQRYGAVVKKH--------NIISK 121 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD--NGKLSC--QLYQRSGD 169 +++ L +P++RR+++S W+ ++ L PC F V NG+L L QRS D Sbjct: 122 LLKQLEDNPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVNGELYLDATLTQRSND 181 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228 + + N Y L MM+A G++ G+F + + ++H+Y+N FEQA L R P P Sbjct: 182 MLVAHHINAMQYVALQMMIAKHFGWRVGKFFYFINNLHIYDNQFEQAQELLKRQPSECNP 241 Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP 254 ++++N P+ D + +DF L Y+P Sbjct: 242 KLVLNVPDGTDFFDIKPDDFALVDYDP 268 >gi|294646594|ref|ZP_06724226.1| thymidylate synthase [Bacteroides ovatus SD CC 2a] gi|292638036|gb|EFF56422.1| thymidylate synthase [Bacteroides ovatus SD CC 2a] Length = 110 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 63/110 (57%), Positives = 82/110 (74%) Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 +G+LS QLYQRS D+FLG+PFNIASY+LL M+A V G + G+F+HT GD H+Y NH E Sbjct: 1 ADGRLSLQLYQRSADIFLGVPFNIASYALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLE 60 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q LQLSR PR LPQM INP++ ++ F++EDF L +Y+PH I V+V Sbjct: 61 QVKLQLSREPRPLPQMKINPDVKNIFDFKFEDFELVNYDPHPHIAGAVAV 110 >gi|225870473|ref|YP_002746420.1| thymidylate synthase [Streptococcus equi subsp. equi 4047] gi|225699877|emb|CAW93768.1| thymidylate synthase [Streptococcus equi subsp. equi 4047] Length = 279 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 26/265 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G + ++ G +DLSKG FP+ T + + KS + EL Sbjct: 12 IKKIMEEGVFSEQARPRYKNGQTANSKYITGAFAEYDLSKGEFPITTLRSIPIKSAIKEL 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + SN + +++ V W+EW + +G YG + D IS I+ Sbjct: 72 FWIYQDQSNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAIVKKH--------DIISKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD--NGKLSC--QLYQRSGDVF 171 + L +P++RR+++S W+ ++ L PC F V +G+L L QRS D+ Sbjct: 124 KQLEDNPWNRRNVISLWDYEAFEESEGLLPCAFQVMFDVRRVDGELYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L +M+A G++ G+F + + ++H+Y+N F QA L R P P++ Sbjct: 184 VAHHINAMQYVALQLMIAKHFGWKAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254 +++ P+ D R EDF L+ Y P Sbjct: 244 LLHVPDGTDFFDIRPEDFELQDYYP 268 >gi|225868468|ref|YP_002744416.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus] gi|225701744|emb|CAW99116.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus] Length = 279 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 127/265 (47%), Gaps = 26/265 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G + ++ G +DLSKG FP+ T + + KS + EL Sbjct: 12 IKKIMEEGVFSEQARPRYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKEL 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + SN + +++ V W+EW + +G YG + D IS I+ Sbjct: 72 FWIYQDQSNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAIVKKH--------DIISKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD--NGKLSC--QLYQRSGDVF 171 + L +P++RR+++S W+ + L PC F V +G+L L QRS D+ Sbjct: 124 KQLEDNPWNRRNVISLWDYEAFEVSEGLLPCAFQVMFDVRRVDGELYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L +M+A G++ G+F + + ++H+Y+N F QA L R P P++ Sbjct: 184 VAHHINAMQYVALQLMIAKHFGWRAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254 +++ P+ D R EDF L+ Y P Sbjct: 244 LLHVPDGTDFFDIRPEDFELQDYHP 268 >gi|312865238|ref|ZP_07725466.1| thymidylate synthase [Streptococcus downei F0415] gi|311099349|gb|EFQ57565.1| thymidylate synthase [Streptococcus downei F0415] Length = 279 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 27/276 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + ++ G + ++ G ++DLSKG FP+ T + + KS + E+ Sbjct: 12 IETILTQGVMSEQARPKYKNGQTANSKYITGSFAQYDLSKGEFPITTLRPIPIKSAIKEI 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + SN L ++ V W++W D G +G YG + D I+ I+ Sbjct: 72 FWIYQDQSNDLDLLNEKYQVKYWNDWEVGDTGTIGQRYGAVVKKH--------DIINKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLAENPWNRRNVISLWDYEAFEESEGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L MM+A G++ G+F + + ++H+Y+N F+QA L+R+P P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFDQAQELLNRTPADKEPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264 I++ P+ + + EDF L YEP + +++ Sbjct: 244 ILDVPDGTNFFDIKPEDFQLLDYEPVKPQLKFDLAI 279 >gi|32709481|gb|AAP86759.1| thymidylate synthase [Enterobacteria phage TuIa] Length = 166 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 12/166 (7%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 Q+ + ++A P RR IVSAWN A ID+MALPPCH +QF V NG L Q YQRS DV Sbjct: 1 QLVKTIDRIKALPNDRRQIVSAWNPAEIDQMALPPCHMFYQFNVRNGHLDLQWYQRSVDV 60 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 FLG+PFNIASY+ LT ++A + G+ + + G+ H+Y+NH EQ + R P+ L + Sbjct: 61 FLGLPFNIASYAALTHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCKEVIRREPKELCSL 120 Query: 231 IIN--------PNIVDLL----SFRYEDFTLRSYEPHAAILAKVSV 264 I P + + + + DF L++YE H AI AK++V Sbjct: 121 EITWPSNFENWPTKIQMDWVTGTMTHTDFVLKNYESHPAIKAKMAV 166 >gi|225696039|gb|ACO06795.1| thymidylate synthase [Lemur catta] Length = 158 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 77/158 (48%), Positives = 100/158 (63%), Gaps = 20/158 (12%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGE 89 FPLLTTK+V WK V+ ELLWF++G +N L GV IWD + +G+ Sbjct: 1 FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRGFLDGLGFSTRGEGD 60 Query: 90 LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN + M Sbjct: 61 LGPVYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLM 120 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 ALPPCH L QFYV NG+LSCQLYQRSGD+ LG+PFNIA Sbjct: 121 ALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIA 158 >gi|238695118|ref|YP_002922312.1| dTMP (thymidylate) synthase [Enterobacteria phage JSE] gi|220029254|gb|ACL78189.1| dTMP (thymidylate) synthase [Enterobacteria phage JSE] Length = 407 Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats. Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 5/159 (3%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSG 168 DQ+ ++ ++ DPYSRR I+ +WNV L CH + QFYV ++ KLSC + RS Sbjct: 250 DQLQKVIDMIKNDPYSRRIIIDSWNVQETHNAVLGVCHPMVQFYVSNDNKLSCLFFMRSN 309 Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+FLG PFN+ASY+LLT ++A + G + GE ++ GD H+Y NHF+Q QLSR P P Sbjct: 310 DLFLGNPFNVASYALLTHIIAKICGLEVGELVYQCGDCHIYKNHFDQVMEQLSRVPFDKP 369 Query: 229 QMIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKVSV 264 + + P L +DF + +Y+ H AI A+++V Sbjct: 370 IIEL-PEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 407 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 53/127 (41%), Positives = 64/127 (50%), Gaps = 18/127 (14%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL LLR V+ G R DRTGVGT S FG +MR DLSKGFPLLTTKK+ SV+ ELL Sbjct: 1 MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATASVIGELL 60 Query: 61 WFLRGDSNVSYLH--------RHGVSIWDEWADKDGE----------LGPIYGVQWRSWP 102 WF+ G + L IW E +G +YG+ WR P Sbjct: 61 WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMAWRRKP 120 Query: 103 DYDGNVI 109 + I Sbjct: 121 IHPHGEI 127 >gi|222152932|ref|YP_002562109.1| thymidylate synthase [Streptococcus uberis 0140J] gi|222113745|emb|CAR41747.1| thymidylate synthase [Streptococcus uberis 0140J] Length = 279 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 21/261 (8%) Query: 7 LLRHVIKFGSDRRDRTG--VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFL 63 L+ V+ + + + G ++ G +DLSKG FP+ T + + KS + ELLW Sbjct: 16 LMDGVLSENARPKYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKELLWIY 75 Query: 64 RGDSNVSYL--HRHGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 + SN + +++ V W++W +G YG + D ++ I++ L Sbjct: 76 QDQSNSLDVLENKYNVHYWNDWEVGTTRTIGQRYGAIVKKH--------DIMTKILKQLS 127 Query: 121 ADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVFLGIP 175 +P++RR+IVS W+ ++ L PC F V L L QRS D+ + Sbjct: 128 DNPWNRRNIVSLWDYEAFEESEGLLPCAFQTMFDVRRVNGEIYLDATLVQRSNDMLVAHH 187 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN- 233 N Y MM+A G++ G+F + + ++H+Y+N F QA+ L R PQ+++N Sbjct: 188 INAMQYVAFQMMIAKHFGWKLGKFFYFVNNLHIYDNQFPQAEELLKREESDCHPQLVLNV 247 Query: 234 PNIVDLLSFRYEDFTLRSYEP 254 P+ + R EDF L Y P Sbjct: 248 PDGTNFFDIRPEDFELLDYNP 268 >gi|195978199|ref|YP_002123443.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974904|gb|ACG62430.1| thymidylate synthase ThyA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 279 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 26/265 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G + ++ G +DLSKG FP+ T + + KS + EL Sbjct: 12 IKKIMEEGVFSEQARPRYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKEL 71 Query: 60 LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116 W + SN + +++ V W+EW + +G YG + D IS I+ Sbjct: 72 FWIYQDQSNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAIVKKH--------DIISKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD--NGKLSC--QLYQRSGDVF 171 + L +P++RR+++S W+ ++ L PC F V +G+L L QRS D+ Sbjct: 124 KQLEDNPWNRRNVISLWDYEAFEESEGLLPCAFQVMFDVRRVDGELYLDATLTQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230 + N Y L +M+A G++ G+F + + ++H+Y+N F QA L R P P++ Sbjct: 184 VAHHINAMQYVALQLMIAKHFGWRAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254 +++ P+ R EDF L+ Y P Sbjct: 244 LLHVPDGTAFFDIRPEDFELQDYHP 268 >gi|225696043|gb|ACO06797.1| thymidylate synthase [Saimiri sciureus] Length = 158 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 78/158 (49%), Positives = 100/158 (63%), Gaps = 20/158 (12%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89 FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D G+ Sbjct: 1 FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGD 60 Query: 90 LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN + M Sbjct: 61 LGPVYGFQWRHFGAEYRDMDSDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 ALPPCH L QFYV NG+LSCQLYQRSGD+ LG+PFNIA Sbjct: 121 ALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIA 158 >gi|225696041|gb|ACO06796.1| thymidylate synthase [Macaca mulatta] Length = 159 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 78/159 (49%), Positives = 100/159 (62%), Gaps = 20/159 (12%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89 FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D G+ Sbjct: 1 FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGD 60 Query: 90 LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN + M Sbjct: 61 LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIAS Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIAS 159 >gi|332523709|ref|ZP_08399961.1| thymidylate synthase [Streptococcus porcinus str. Jelinkova 176] gi|332314973|gb|EGJ27958.1| thymidylate synthase [Streptococcus porcinus str. Jelinkova 176] Length = 279 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 26/265 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G ++L+ FP+ T + + KS + EL Sbjct: 12 IQKILETGVFSEQARPKYKDGQTANSKYLTGVFTEYNLAEDDFPITTLRPIPIKSAIKEL 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + + V W++W + +G YG + D ++ I+ Sbjct: 72 LWIYQDQSNSLDVLEEKYNVHYWNDWEVGNTRTIGQRYGAVVKKH--------DIMTKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLADNPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLVQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS-PRTLPQM 230 + N Y L MM+A ++ G+F + + ++H+Y+N F QA+ LSR P++ Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKIGKFFYFVNNLHIYDNQFSQAEELLSREASNCKPRL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254 ++N P+ D EDF L Y P Sbjct: 244 VLNVPDGTDFFDICAEDFELVDYNP 268 >gi|119622127|gb|EAX01722.1| thymidylate synthetase, isoform CRA_g [Homo sapiens] Length = 186 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 20/153 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62 QYL ++H+++ G + DRTG GT S FG Q R+ L FPLLTTK+V WK V+ ELLWF Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102 ++G +N L GV IWD +D G+LGP+YG QWR + Sbjct: 92 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151 Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 DY G +DQ+ ++ +++ +P RR I+ AWN Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNP 184 >gi|225696033|gb|ACO06792.1| thymidylate synthase [Pan troglodytes] gi|225696035|gb|ACO06793.1| thymidylate synthase [Pan paniscus] Length = 159 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 20/159 (12%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89 FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D G+ Sbjct: 1 FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGD 60 Query: 90 LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGP+YG QWR + DY G +DQ+ ++ +++++P RR I+ AWN + M Sbjct: 61 LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKSNPDDRRIIMCAWNPRDLPLM 120 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIAS Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIAS 159 >gi|225075851|ref|ZP_03719050.1| hypothetical protein NEIFLAOT_00874 [Neisseria flavescens NRL30031/H210] gi|224952797|gb|EEG34006.1| hypothetical protein NEIFLAOT_00874 [Neisseria flavescens NRL30031/H210] Length = 309 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY+ LL+ ++ R +RTG + Q + FP LT ++ +WKS V E+L Sbjct: 21 QQYVQLLKDLLDAPLVRNERTGTACHTIINPQSFTYTADDFPALTIRRSYWKSAVAEMLG 80 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVI 109 ++RG ++ G WD A+++ ++G +YG S+ Sbjct: 81 YIRGYTSAKDFRELGTKTWDANANQNPAWLANPHRAGVDDMGLVYGAVGNSFTGLS---- 136 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 + I++++ A +R I S WN + DK L PC QF + NG L QRS D Sbjct: 137 --FTDIMRAIHARQDNRGLIWSFWNPDVFDKGCLRPCMYSHQFSIVNGTLYLTSTQRSCD 194 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS--PRTL 227 V LG+ FN+ L ++ ++ G ++G H + + H+Y N + ++ PR++ Sbjct: 195 VPLGLTFNMIQCWFLLYLVCTLTGLKFGHARHNIVNAHIYENQVDAVREMIANPLLPRSI 254 Query: 228 PQMIINP----------NIVD----LLSFRYEDFTLRSYE 253 ++ ++ L S DF L Y+ Sbjct: 255 KFQHVDRMTGRVRMGVEDVDSALLFLNSCDVNDFELLGYD 294 >gi|313890613|ref|ZP_07824241.1| thymidylate synthase [Streptococcus pseudoporcinus SPIN 20026] gi|313121130|gb|EFR44241.1| thymidylate synthase [Streptococcus pseudoporcinus SPIN 20026] Length = 279 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 122/265 (46%), Gaps = 26/265 (9%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 ++ +++ G D ++ G ++L++G FP+ T + + KS + EL Sbjct: 12 IQKILETGVFSEQARPKYKDGQTANSKYLTGVFAEYNLAEGDFPITTLRPIPIKSAIKEL 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIV 116 LW + SN + + V W +W + +G YG + D ++ I+ Sbjct: 72 LWIYQDQSNSLDVLEEKYNVHYWKDWEVGNTRTIGQRYGAVVKKH--------DIMTKIL 123 Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171 + L +P++RR+++S W+ ++ L PC F V + L L QRS D+ Sbjct: 124 KQLADNPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLVQRSNDML 183 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS-PRTLPQM 230 + N Y L MM+A ++ G+F + + ++H+Y+N F QA+ L+R P + Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKVGKFFYFVNNLHIYDNQFSQAEELLNREASHCQPHL 243 Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254 ++N P+ + EDF L Y+P Sbjct: 244 VLNVPDGTNFFDIGVEDFELVDYDP 268 >gi|225696037|gb|ACO06794.1| thymidylate synthase [Gorilla gorilla] Length = 159 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 20/159 (12%) Query: 42 FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89 FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D G+ Sbjct: 1 FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGD 60 Query: 90 LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN + M Sbjct: 61 LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120 Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNI S Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIXS 159 >gi|326536756|ref|YP_004301187.1| Td thymidylate synthetase [Aeromonas phage 65] gi|312263102|gb|ADQ53358.1| Td thymidylate synthetase [Aeromonas phage 65] Length = 313 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 27/283 (9%) Query: 3 QYLDLLRHVIKFGSDR-RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 +Y +L+ +V G+D RTG R+ + M +D P+++ K+V +K + E + Sbjct: 35 EYYNLVHYVYNHGTDIFNKRTGFVCRTIPTHVMVYD---RCPMISHKQVFFKMFIAEFIG 91 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDGNVI 109 +LRG ++ G WD A++ + ++G +YG R + G Sbjct: 92 YLRGYTSAKQFRDLGTRTWDANANETKAWLINPNRKGEDDMGNVYGSIARDFGA-KGGQY 150 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 D + + + L+ +R I++ W+ + D+ L PC + QF + L YQRS D Sbjct: 151 DLLWDVYEDLQKGIDNRGEIITFWDPSRFDEGCLRPCMMMHQFQLIGDTLHLTSYQRSTD 210 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-- 227 + LG P N+ ++A + G + G+ H + ++H+Y N FE + L+R P T+ Sbjct: 211 ILLGGPANMLQAWFFLELMARITGHKIGKVTHVMNNIHIYENQFESCEEFLNRVPHTMNN 270 Query: 228 PQMIINPNIVDLLSFRYED-------FTLRSYEPHAAILAKVS 263 P ++ + VDL + +D TL Y + + + Sbjct: 271 PSLVFDDKCVDL-CYVLDDSNGVYDIVTLDGYHHNGKLDIPFA 312 >gi|148550248|ref|YP_001270350.1| thymidylate synthase [Pseudomonas putida F1] gi|148514306|gb|ABQ81166.1| thymidylate synthase [Pseudomonas putida F1] Length = 234 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 120/236 (50%), Gaps = 53/236 (22%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R VI G+ + +RTG+ T S G +RFDL KGFP +TT+K+ +KS + E++ Sbjct: 1 MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105 FLRG N G +WD+ A++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQ+ + ++ DP SRR + WN Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNI---ASYSLLT 185 A +D+MALPPCH L+QF+ V+ ++S LY RS D+ G+ ++ A Y+LL Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDL--GLLLDMGKSAQYALLA 234 >gi|213025197|ref|ZP_03339644.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 151 Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 73/120 (60%), Positives = 97/120 (80%) Query: 34 MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+ Sbjct: 1 MRFNLLEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60 Query: 94 YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153 YG QWR+WP DG IDQI++++ L+ DP SRR IVSAWNV +DKMAL PCH F Sbjct: 61 YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFSSFM 120 >gi|167837402|ref|ZP_02464285.1| thymidylate synthase [Burkholderia thailandensis MSMB43] Length = 193 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 13/172 (7%) Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF--YVDNGKLSCQL 163 IDQ+ + ++ DP SRR + WN A++D++ALP CH L+QF V+ ++S L Sbjct: 22 HKAIDQLRDCLDTIVRDPSSRRILFHGWNPAVLDEIALPACHLLYQFLPNVERREISLCL 81 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 Y RS DV LG PFN+A + L ++ + G+ F + +GD H+Y N + QL R Sbjct: 82 YIRSNDVGLGTPFNLAEGAALLTLVGRLTGYTPRWFTYFIGDAHIYENQLDMLKQQLERE 141 Query: 224 PRTLPQMIINPNIVD-----------LLSFRYEDFTLRSYEPHAAILAKVSV 264 P P++ I + D L DF L Y H + A ++V Sbjct: 142 PFESPRLEIAERVPDYAKTGEYEPQWLERIEPSDFALVGYRHHEPLTAPMAV 193 >gi|330899102|gb|EGH30521.1| thymidylate synthase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 234 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 113/218 (51%), Gaps = 48/218 (22%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDV 170 A +D+MALPPCH L+Q + + ++S LY RS D+ Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDL 218 >gi|218673225|ref|ZP_03522894.1| thymidylate synthase [Rhizobium etli GR56] Length = 107 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 66/107 (61%), Positives = 84/107 (78%) Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 KLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA Sbjct: 1 KLSCQLYQRSADIFLGVPFNIASYALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFDQAK 60 Query: 218 LQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 LQL+R P+ LP M INP + D+ F ++DF L YE A+I A ++V Sbjct: 61 LQLTRRPKPLPFMRINPEVKDIFGFTFDDFELIGYEADASIKAPIAV 107 >gi|15193286|gb|AAK91762.1|AF406763_2 thymidylate synthase [Streptococcus thermophilus] Length = 268 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 23/260 (8%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 + +++ G D T ++ G +DLSKG FP+ T + + KS + E+ Sbjct: 12 ITKIMEEGVWSEQARPKYKDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71 Query: 60 LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114 + +N + + V W++W + P RS G V+ D I+ Sbjct: 72 XXXXQDQTNSLDVLEDKYNVHYWNDWEVEGV---PANNGDKRSIGQRYGAVVKKHDIINR 128 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169 ++ L A+P++RR+++S W+ +++ L PC F V + L L QRS D Sbjct: 129 LLAQLEANPWNRRNVISLWDYEALEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSND 188 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228 + + N Y L MM+A G++ G+F + + ++H+Y+N FEQA+ L R P P Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248 Query: 229 QMIIN-PNIVDLLSFRYEDF 247 ++++N P+ + + ED Sbjct: 249 RLVLNVPDETNFFDIKPEDI 268 >gi|330967053|gb|EGH67313.1| thymidylate synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 234 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 113/218 (51%), Gaps = 48/218 (22%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG +N + G +WD+ A+++ ELG IYGVQWR WP Y Sbjct: 61 GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDELGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI V ++ DP SRR + WN Sbjct: 121 VGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDV 170 A +D+MALPPCH L+Q + + ++S LY RS D+ Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDL 218 >gi|89512123|gb|ABD73958.1| dihydrofolate reductase [Plasmodium atheruri] gi|89512137|gb|ABD73965.1| dihydrofolate reductase [Plasmodium vinckei] gi|89512147|gb|ABD73970.1| dihydrofolate reductase [Plasmodium vinckei petteri] gi|89512149|gb|ABD73971.1| dihydrofolate reductase [Plasmodium vinckei petteri] Length = 172 Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+LS+ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + DY +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +DKMALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDLDKMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|89512139|gb|ABD73966.1| dihydrofolate reductase [Plasmodium vinckei vinckei] Length = 172 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+LS+ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + DY +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMYADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|89512129|gb|ABD73961.1| dihydrofolate reductase [Plasmodium chabaudi adami] gi|89512131|gb|ABD73962.1| dihydrofolate reductase [Plasmodium chabaudi adami] gi|89512133|gb|ABD73963.1| dihydrofolate reductase [Plasmodium chabaudi chabaudi] gi|89512135|gb|ABD73964.1| dihydrofolate reductase [Plasmodium chabaudi chabaudi] gi|89512141|gb|ABD73967.1| dihydrofolate reductase [Plasmodium vinckei brucechwatti] gi|89512145|gb|ABD73969.1| dihydrofolate reductase [Plasmodium vinckei lentum] Length = 172 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+LS+ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + DY +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|89512143|gb|ABD73968.1| dihydrofolate reductase [Plasmodium vinckei lentum] Length = 172 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+LS+ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + DY +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 ID+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDIDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|169618784|ref|XP_001802805.1| hypothetical protein SNOG_12584 [Phaeosphaeria nodorum SN15] gi|160703681|gb|EAT79882.2| hypothetical protein SNOG_12584 [Phaeosphaeria nodorum SN15] Length = 256 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 81/215 (37%), Positives = 113/215 (52%), Gaps = 40/215 (18%) Query: 2 HQYLDL-LRHVIKFGSDRRDRTGVGTRST-FGYQMRFDLSK-----------GFPLLTTK 48 +QYL+ +RH + S +GT + F Q++F LS+ PLLTTK Sbjct: 42 YQYLNHDIRHPSQMASTAPTAPALGTYALPFPPQLKFTLSRPSTDPSSPPDLILPLLTTK 101 Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGV 96 +V ++V+ ELLWF+ G ++ L G+ IWD ++GELGP+YG Sbjct: 102 RVFTRAVIAELLWFIAGSTHSQPLSDAGIKIWDGNGSRAYLDSVGLNHYEEGELGPVYGF 161 Query: 97 QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 QWR + DY G +DQ++ ++ ++ PY RR I+SAWN A + KMALPPCH Sbjct: 162 QWRHFGAEYKGHAHDYTGEGVDQLADVIDKIKNKPYDRRIILSAWNPADLKKMALPPCHM 221 Query: 149 LFQFYV-------DNGKLSCQLYQRSGDVFLGIPF 176 QFYV G L LYQRS D+ LG+PF Sbjct: 222 FAQFYVSFPNGKERRGVLHSLLYQRSCDMGLGVPF 256 >gi|295099624|emb|CBK88713.1| Thymidylate synthase [Eubacterium cylindroides T2-87] Length = 231 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 14/214 (6%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L +++ G +RTG+ T + ++ + FP+LTTK++ + V E+LW Sbjct: 8 YCQLCENILTNGVQVANRTGIDTIKLPSAHFQLNVGEEFPILTTKQLFIRQAVLEMLWIY 67 Query: 64 RGDSN-VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDG------------NVI 109 + SN V +L V IWD W D++G+ + D Sbjct: 68 QAQSNDVRWLQERNVHIWDLWQIDENGDWRDEKTGEVLKHFDPKFANTIGTAYGYIVKRF 127 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 + ++ SL+ + RR ++S W +D LP C ++ V NG L+ ++QRS D Sbjct: 128 KLMDRLIDSLKNNVNDRRRVISLWQDEYLDTAVLPSCVWSSEWDVTNGTLNAWVHQRSCD 187 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 V LG+PFN+ Y++L MLA V G + G ++ Sbjct: 188 VPLGLPFNVTQYAVLLKMLAQVTGLKAGTIDWSI 221 >gi|89512125|gb|ABD73959.1| dihydrofolate reductase [Plasmodium berghei] gi|89512127|gb|ABD73960.1| dihydrofolate reductase [Plasmodium berghei] Length = 172 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 79/172 (45%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+L++ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLNEYFPLLTTKKLFIRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + +Y +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMHDNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|89512151|gb|ABD73972.1| dihydrofolate reductase [Plasmodium yoelii] gi|89512153|gb|ABD73973.1| dihydrofolate reductase [Plasmodium yoelii killicki] gi|89512155|gb|ABD73974.1| dihydrofolate reductase [Plasmodium yoelii nigeriensis] gi|89512157|gb|ABD73975.1| dihydrofolate reductase [Plasmodium yoelii yoelii] gi|89512159|gb|ABD73976.1| dihydrofolate reductase [Plasmodium yoelii yoelii] Length = 172 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 80/172 (46%), Positives = 110/172 (63%), Gaps = 20/172 (11%) Query: 36 FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87 F+L++ FPLLTTKK+ + ++ ELLWF+RG++N + L V IW+ ++ Sbjct: 1 FNLNQYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60 Query: 88 ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135 +LGPIYG QWR + +Y +DQ+ +I+ ++ DP RR I+ AWNV Sbjct: 61 HREVNDLGPIYGFQWRHFGAEYTDMHDNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120 Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +DKMALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M Sbjct: 121 KDLDKMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172 >gi|207341205|gb|EDZ69321.1| YOR074Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 164 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 67/154 (43%), Positives = 87/154 (56%), Gaps = 22/154 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59 QYLDL + +I G R DRTG GT S F Q+RF L FPLLTTKKV + ++ EL Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102 LWFL GD++ + L GV IWD ++ G+LGP+YG QWR + Sbjct: 71 LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130 Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133 DY G IDQ+ ++ L+ +PY RR I+SAW Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAW 164 >gi|254490265|ref|ZP_05103454.1| thymidylate synthase [Methylophaga thiooxidans DMS010] gi|224464398|gb|EEF80658.1| thymidylate synthase [Methylophaga thiooxydans DMS010] Length = 194 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 14/190 (7%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58 M QYLDL + +I+ G RTG + + +D++ FPL+TT+K +WK+ + E Sbjct: 1 MRQYLDLCQRIIEHGEWVENTRTGKRCLTVINADLEYDVAANQFPLITTRKSYWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 +L +LRG N + G WD A+ + ++G +YGVQ R W DG Sbjct: 61 MLGYLRGYDNAADFRAIGCKTWDANANANQDWLNNPHRKGEDDMGRVYGVQGRRWQKPDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 +DQ+ I L R I++ +N D L PC F V L YQR Sbjct: 121 TPLDQLQKIADHLAQGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSVLGDTLYLTSYQR 180 Query: 167 SGDVFLGIPF 176 S DV LG+ F Sbjct: 181 SCDVPLGLNF 190 >gi|325661465|ref|ZP_08150091.1| hypothetical protein HMPREF0490_00825 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472414|gb|EGC75626.1| hypothetical protein HMPREF0490_00825 [Lachnospiraceae bacterium 4_1_37FAA] Length = 295 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 44/289 (15%) Query: 8 LRHVIKFGSDRR-------DRTGVGTRSTFGYQMR-FDLSKG-FPLLTTKKVHWKSVVHE 58 + +++K G D + T S MR +DLSKG FP+ T + + WKS + E Sbjct: 13 VENILKCGYKDENPRPKYKDGSPAYTISV-NQNMRMYDLSKGEFPINTLRPIPWKSAIKE 71 Query: 59 LLWFLR-GDSNVSYLH-RHGVSIWDEWADKD--GELGPIYGVQWRSWPDYDGNVIDQISS 114 + W + +N+ L+ ++ + W++W KD +G YG + + D + + Sbjct: 72 IFWIYQEASNNLEILNNKYNIKYWNDWQSKDVPNTIGQRYGATVKRY--------DLVKN 123 Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNG-----KLSCQLYQRSG 168 +++S+ DP+ R I++ W + + L PC L + V L L QRSG Sbjct: 124 LIKSINEDPFGRHKIMNLWQEKDLQETDGLLPCAFLTMWSVRKNLEGKNFLDMTLIQRSG 183 Query: 169 DV---FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--- 222 D+ G N Y+ L MM+A G F+H + + +Y+ H +QA R Sbjct: 184 DMLAASGGGGVNEVQYAALLMMIARHCDLLPGVFVHFVQNEQIYDRHIDQAGEMRRRYIN 243 Query: 223 ---------SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP-HAAILAK 261 +P +++ D S +DF + YEP I + Sbjct: 244 MTMDEFYHEYEHKVPMLVLKDEAKDFYSMTIDDFEMIDYEPIKPQIKFE 292 >gi|310722251|ref|YP_003969075.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4] gi|306021094|gb|ADM79629.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4] Length = 173 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 67/155 (43%), Positives = 96/155 (61%), Gaps = 17/155 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QY DL+ +I G + DRTGVGTRS FG +RFDLSKGFP T K++ + VV ELL Sbjct: 1 MIQYTDLVCDIITNGRKKTDRTGVGTRSVFGRMLRFDLSKGFPATTCKRLAFVPVVGELL 60 Query: 61 WFLRGDSNVSYLHRHG-------VSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105 WF++G +NV +L + +IWD+ +K DG LGP+YG QWR + + + Sbjct: 61 WFMQGSTNVEHLRKLTYGENSDRKTIWDDNYNKQAVDLGYSDGYLGPVYGKQWRMFGNKN 120 Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +DQ+ +++ ++A+P SRR +V AWN I+K Sbjct: 121 --PVDQLQNVIDQIKANPDSRRLLVVAWNPEDIEK 153 >gi|327197801|ref|YP_004301499.1| gp165 [Brochothrix phage A9] gi|299810401|gb|ADJ53200.1| gp165 [Brochothrix phage A9] Length = 304 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 72/295 (24%), Positives = 117/295 (39%), Gaps = 40/295 (13%) Query: 3 QYLDLLRHVIKFGSDRRDR----TGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVH 57 QYLD L + G D R G R M L ++ L+ K V K + Sbjct: 6 QYLDGLFRIFDEGHDEPARGHYQDGTQARHLIIPSMEITLKAEETGRLSLKHVGAKDPIK 65 Query: 58 ELLWFLRG-DSNVSYLHRHGVSIWDE--WADKDGELGPIYGVQWRSWPDYDGNV------ 108 E+LW + S+V+ L G +W+ W + + P YG Q G Sbjct: 66 EMLWIYQKASSDVTELQEMGCKVWNNTAWHSSENNIAPAYGHQIAKITRVKGKTEQILAY 125 Query: 109 ----------------------IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 ++Q+ ++ L DP+S+R WNV+ +D M LPPC Sbjct: 126 QQAMYGVPIHDSLLPKAINTFKMNQMHRVIWDLVNDPHSKRIATELWNVSDLDDMVLPPC 185 Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206 ++ V GKL ++ QRS D +G+P+NI + +L M++ G G+++H + +V Sbjct: 186 VHRTEWSVIGGKLHLKVLQRSADYCVGVPYNIYQFDVLRRMVSVATGIPLGDYVHNMSNV 245 Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 H+Y+ H A ++P+ V + + L A A Sbjct: 246 HIYDRHIPDAFEMAKTDVDSIPE----TKPVSINKKGFARMKLDDMYHDPAYEAP 296 >gi|189490502|ref|YP_001957072.1| putative thymidylate synthase [Pseudomonas phage 201phi2-1] gi|164609567|gb|ABY63176.1| hypothetical protein 201phi2-1p350 [Pseudomonas phage 201phi2-1] Length = 457 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 89/271 (32%), Positives = 115/271 (42%), Gaps = 80/271 (29%) Query: 74 RHGVSIWDEWADKD------GELGPIYGVQWRS-----------WPDYDGNVIDQISSIV 116 + I+ DK+ G+LG +YG WR W DY+ D + + Sbjct: 187 EYDQRIYRLLFDKEPMKLIGGDLGAVYGKTWRDIEDTRVIPKYDWVDYEARGFDFVVDVP 246 Query: 117 QS----------------------LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154 + LR +P SRR IV AW L+D+ ALPPCH FQF+ Sbjct: 247 GTSIENDRCVVTRRIDQIQDIIDQLRTNPDSRRIIVCAWAPQLVDEQALPPCHSFFQFWT 306 Query: 155 D---------------------------------------NGKLSCQLYQRSGDVFLGIP 175 +SC LYQRS D FLG P Sbjct: 307 RELTVEERIKLLRTTKPEIYNVIDGTTGYFEHIADINDIPKRAISCHLYQRSVDAFLGKP 366 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 FNI YSLLT LA+ + EF+ T GD H+Y+NH EQ DLQL+R P+ LP + P Sbjct: 367 FNITFYSLLTHWLANQLNMVADEFVWTGGDCHIYSNHQEQTDLQLTREPKALPTIRFTPE 426 Query: 236 I--VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 D+ R EDF + +YE H I KV+V Sbjct: 427 AKGKDIREIRPEDFEILNYEFHPHIAGKVAV 457 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 1/88 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHEL 59 M QYLD + + + G + DRTG GT+S G Q R+ L P++TTKK+H S++HEL Sbjct: 1 MQQYLDSIIDIKENGVFKGDRTGTGTQSKLGQQERYSLRDNTLPVITTKKIHLPSIIHEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD 87 +W L GD+ V YL +GV IW+EW Sbjct: 61 IWMLSGDTRVDYLIENGVRIWNEWVKPH 88 >gi|78499355|gb|ABB45712.1| thymidylate synthetase [Ovis aries] Length = 147 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 20/147 (13%) Query: 37 DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD--------- 87 +L FPLLTTK+V WK V+ ELLWF++G +N L GV IWD +D Sbjct: 1 NLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSN 60 Query: 88 ---GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA 136 G+LGP+YG QWR + DY G +DQ+ ++ +++ +P RR I+ AWN Sbjct: 61 RAEGDLGPVYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPK 120 Query: 137 LIDKMALPPCHCLFQFYVDNGKLSCQL 163 + MALPPCH L QFYV NG+ SCQL Sbjct: 121 DLPLMALPPCHALCQFYVVNGEPSCQL 147 >gi|21700307|gb|AAM75813.1|AF450270_1 bifunctional dihydrofolate reductase-thymidylate synthase [Cercomonas longicauda] Length = 314 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 68/167 (40%), Positives = 91/167 (54%), Gaps = 22/167 (13%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 +Y+DL+R + G R DRTGVG + FG M+F L G PLLT +K+ WK VV ELLW Sbjct: 148 EYIDLIRRIRDQGEIRTDRTGVGIKCVFGNMMKFSLENGQIPLLTIRKIFWKGVVEELLW 207 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101 LRG ++ L GV+IW ++ G+LGPIYG QWR Sbjct: 208 MLRGKTHSRDLEEKGVNIWRANGSREALDRLGMVDREVGDLGPIYGWQWRHSGAXYTTAH 267 Query: 102 PDYDGNVIDQISSIVQSLRADPY-SRRHIVSAWNVALIDKMALPPCH 147 DY G +DQI ++ L+ P +RR + +WN + +MALPPCH Sbjct: 268 TDYSGFGVDQIKDVISQLQNQPQKNRRILFCSWNPKDLKQMALPPCH 314 >gi|90580569|ref|ZP_01236374.1| thymidylate synthase [Vibrio angustum S14] gi|90438227|gb|EAS63413.1| thymidylate synthase [Photobacterium angustum S14] Length = 187 Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 85/185 (45%), Gaps = 14/185 (7%) Query: 1 MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYL L + ++ G +RTG + + +D++ FPL+TT+K WK+ + E Sbjct: 1 MKQYLALCQRIVDDGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106 LL +LRG N + G + W+ A+ + ++G +YGVQ R W DG Sbjct: 61 LLGYLRGYDNAAQFRAIGCNTWNANANDNQAWLNNPHRKGEDDMGRVYGVQGRRWQKSDG 120 Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 IDQ+ IV L R I++ +N D L PC F + L YQR Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180 Query: 167 SGDVF 171 S DV Sbjct: 181 SCDVP 185 >gi|71665293|ref|XP_819618.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi strain CL Brener] gi|70884927|gb|EAN97767.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma cruzi] Length = 118 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 55/118 (46%), Positives = 74/118 (62%) Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206 L QFYV NG+LSC LYQRS D+ LG+PFNIASY+LLT+++A G + GE +HTLGD Sbjct: 1 TWLAQFYVSNGELSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDA 60 Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 H+Y+NH E + QL R PR P ++ L + D + Y P+ I K++V Sbjct: 61 HVYSNHVEPCNEQLKRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 118 >gi|112383428|gb|ABI17851.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] gi|118500801|gb|ABK97597.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] Length = 195 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 86/147 (58%), Gaps = 21/147 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 49 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD +K+ +LGP+YG QWR + Sbjct: 109 WFLRGETNARLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRR 127 +YDG +DQI IV++++A+P RR Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195 >gi|112383430|gb|ABI17852.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] Length = 195 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 86/147 (58%), Gaps = 21/147 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT S FG QMRF L PLLTTK+V W+ V ELL Sbjct: 49 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD +K+ +LGP+YG QWR + Sbjct: 109 WFLRGETNAXLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRR 127 +YDG +DQI IV++++A+P RR Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195 >gi|331017947|gb|EGH98003.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 216 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 99/204 (48%), Gaps = 46/204 (22%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L+ HVIK G+ + +RTGV T S G +R+DL +GFP +TT+++ +KS + E++ Sbjct: 1 MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105 FLRG SN + G +WD+ A+++ +LG IYGVQWR WP Y Sbjct: 61 GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120 Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134 IDQI + ++ DP SRR + WN Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180 Query: 135 VALIDKMALPPCHCLFQFYVDNGK 158 A +D+MALP CH K Sbjct: 181 CAQLDEMALPACHFADSATPTVKK 204 >gi|112383432|gb|ABI17853.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] gi|112383434|gb|ABI17854.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] gi|112383436|gb|ABI17855.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica] Length = 195 Score = 151 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 21/147 (14%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 QYL+L+ ++K G + DRTGVGT FG QMRF L PLLTTK+V W+ V ELL Sbjct: 49 RQYLELIDRIMKTGIVKEDRTGVGTIGLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102 WFLRG++N L + IWD +K+ +LGP+YG QWR + Sbjct: 109 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168 Query: 103 --DYDGNVIDQISSIVQSLRADPYSRR 127 +YDG +DQI IV++++A+P RR Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195 >gi|115524187|ref|YP_781098.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] gi|115518134|gb|ABJ06118.1| thymidylate synthase [Rhodopseudomonas palustris BisA53] Length = 99 Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats. Identities = 57/93 (61%), Positives = 72/93 (77%) Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 G PFNIASY+LLTMM+A V G + G+F+HTLGD HLY+NH EQA LQL+R+PR LP M Sbjct: 7 TGKPFNIASYALLTMMVAQVTGLKPGDFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMT 66 Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 INP + D+ F+YEDF L+ Y+PH I A+V+V Sbjct: 67 INPEVKDIFGFKYEDFALQGYDPHPHIKAEVAV 99 >gi|45686030|ref|YP_003793.1| thymidylate synthase [Ambystoma tigrinum virus] gi|37722454|gb|AAP33199.1| thymidylate synthase [Ambystoma tigrinum stebbensi virus] Length = 95 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 47/95 (49%), Positives = 62/95 (65%) Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + G+PFNIASY LLT M+A V G + GEF+HTLGD H+Y +H E QL R PR P Sbjct: 1 MGFGVPFNIASYFLLTYMMAYVTGLEPGEFVHTLGDAHVYLDHVEPLKTQLEREPRPFPT 60 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + IN + L F+ EDF+L Y+PH AI +++V Sbjct: 61 LRINRRVESLDDFKAEDFSLEGYDPHPAIRMRMAV 95 >gi|332975814|gb|EGK12693.1| thymidylate synthase [Psychrobacter sp. 1501(2011)] Length = 102 Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 50/95 (52%), Positives = 65/95 (68%) Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 +FLG+PFNIASYSLLT M+A V + GEFI T GD HLY NH EQ + QLSR LP Sbjct: 8 IFLGVPFNIASYSLLTHMIAQVCDLEVGEFIWTGGDCHLYQNHIEQVNEQLSREAYELPT 67 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + +NP+I D+ F ++D + +Y+ H AI A V+V Sbjct: 68 LWLNPDIKDIFDFTFDDIRVENYKSHPAIKAPVAV 102 >gi|225734443|gb|ACO25211.1| thymidylate synthase [Epizootic haematopoietic necrosis virus] Length = 95 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 47/95 (49%), Positives = 63/95 (66%) Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + LG+PFNIASYSLLT M+A V G + GEF+H LGD H+Y ++ E QL R PR P Sbjct: 1 MGLGVPFNIASYSLLTYMMAHVTGLEPGEFVHNLGDAHVYLDNVEPLKTQLEREPRPFPT 60 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + IN + L F+ EDF+L Y+PH AI +++V Sbjct: 61 LRINRRVESLDDFKAEDFSLEGYDPHPAIRMRMAV 95 >gi|238602652|ref|XP_002395739.1| hypothetical protein MPER_04156 [Moniliophthora perniciosa FA553] gi|215466985|gb|EEB96669.1| hypothetical protein MPER_04156 [Moniliophthora perniciosa FA553] Length = 110 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 1/110 (0%) Query: 156 NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 KLSC +YQRS D+ LGIPFNIASY+LL M+A V G + E I LGD H+Y +H + Sbjct: 1 KPKLSCLMYQRSADLGLGIPFNIASYALLVHMMAQVTGTEPHELIIQLGDAHVYRDHVDA 60 Query: 216 ADLQLSRSPRTLPQMIINPN-IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QL R PR P++ I D+ F Y DF + Y+P+ +I K+SV Sbjct: 61 LKTQLEREPRPFPKLKWAREGINDIEDFVYSDFVVEGYDPYPSIPMKMSV 110 >gi|167945963|ref|ZP_02533037.1| thymidylate synthase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 93 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 62/93 (66%), Positives = 78/93 (83%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+RHV G + DRTG GTRS FGYQMRFDL++GFP LTTKK+H +S++HELL Sbjct: 1 MKQYLDLMRHVRDQGVTKGDRTGTGTRSVFGYQMRFDLAEGFPALTTKKLHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 WFL+GD+N+ YL +GV IWDEWAD++G+LGP+ Sbjct: 61 WFLQGDTNIRYLKENGVRIWDEWADENGDLGPV 93 >gi|213418917|ref|ZP_03351983.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 93 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 55/93 (59%), Positives = 79/93 (84%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYL+L++ V+ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL Sbjct: 1 MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 WFL+GD+N++YLH + V+IWDEWAD++G+LGP+ Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 93 >gi|213026353|ref|ZP_03340800.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 91 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 43/91 (47%), Positives = 59/91 (64%) Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233 +PFNIASY+LL M+A G+F+ T GD HLY+NH EQ LQLSR PR LP+++I Sbjct: 1 MPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 60 Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L +R++DF + Y+PH I A V++ Sbjct: 61 RKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 91 >gi|238025095|ref|YP_002909327.1| Thymidylate synthase protein [Burkholderia glumae BGR1] gi|237879760|gb|ACR32092.1| Thymidylate synthase protein [Burkholderia glumae BGR1] Length = 329 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D F ++K + E LW+ Sbjct: 12 YLATLRDVCTAYEYRNAPRGQAEREIIGYSARIEDPRARFCRHASRKQNVVFNYAEALWY 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G ++++++ + S+ D G YG + + D IDQI + L+ D Sbjct: 72 LSGRNDLAFIEYYAPSMARYSPDGKTLPGTGYGARLLHFGDD---GIDQIERAIDILKRD 128 Query: 123 -PYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 S+R ++ ++ + C Q + +G+L+ + R+ D ++G+ ++ Sbjct: 129 DAESKRVVLQIFDAREDLYKRNIDVSCTLGLQLLLRDGRLNMVAFMRANDAYVGLLNDVF 188 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L LAS IG + G + H +G VH+Y+ + QA+ L Sbjct: 189 SFTFLQEYLASAIGCELGTYTHHVGSVHIYDQNLLQAEALL 229 >gi|310823030|ref|YP_003955388.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] gi|309396102|gb|ADO73561.1| Thymidylate synthase [Stigmatella aurantiaca DW4/3-1] Length = 336 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 6/220 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL LR + + R G +R G+ D +K + E LW+ Sbjct: 14 YLHGLRWIYESPQFRVAPRGFASRENLGFCFELTDPLARVSCAPERKTNIIFNFAEALWY 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ + + SI D G YG + + G I+Q + V L+ D Sbjct: 74 LSGQADLEQISYYAPSIRKYSMDGRTLTGTAYGAKLFRFG---GAAINQWNRAVDLLKED 130 Query: 123 PYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P ++R ++ ++ + C QF+V G+L Y R+ D F G+ +I S Sbjct: 131 PNTKRAVLQIFDAHELLIQDNIDVSCTLGLQFFVREGRLYAAAYMRANDAFRGVVSDIFS 190 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 ++ L M+A +G + G + H +G H+Y + L Sbjct: 191 FTFLQEMMARQLGLKVGSYFHYVGSFHIYEPDIAAVERLL 230 >gi|115377305|ref|ZP_01464513.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] gi|115365683|gb|EAU64710.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1] Length = 333 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 6/220 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL LR + + R G +R G+ D +K + E LW+ Sbjct: 11 YLHGLRWIYESPQFRVAPRGFASRENLGFCFELTDPLARVSCAPERKTNIIFNFAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ + + SI D G YG + + G I+Q + V L+ D Sbjct: 71 LSGQADLEQISYYAPSIRKYSMDGRTLTGTAYGAKLFRFG---GAAINQWNRAVDLLKED 127 Query: 123 PYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P ++R ++ ++ + C QF+V G+L Y R+ D F G+ +I S Sbjct: 128 PNTKRAVLQIFDAHELLIQDNIDVSCTLGLQFFVREGRLYAAAYMRANDAFRGVVSDIFS 187 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 ++ L M+A +G + G + H +G H+Y + L Sbjct: 188 FTFLQEMMARQLGLKVGSYFHYVGSFHIYEPDIAAVERLL 227 >gi|167996982|gb|ACA14348.1| MilA [Streptomyces rimofaciens] Length = 334 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 12/236 (5%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL LR + R G +R G R D + + ++ + E LW+ Sbjct: 13 YLSQLRDIYHSPEFRNAPRGQASRERIGAGFRLLDPVQRHISVPARRANVVFNFAEALWY 72 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G + ++ + I AD G YG + P ++Q ++V++L D Sbjct: 73 LSGSDRLDFIQYYAPGIAAYSADGRTLRGTAYGPRIFRHP---AGGVNQWENVVKTLTDD 129 Query: 123 PYSRRHIVSAWNVALID--KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P S+R ++ ++ + C QF + +G L Y R+ D F G ++ S Sbjct: 130 PDSKRAVIQIFDPRELAVADNIDVACTLALQFLIRDGLLCGIGYMRANDAFRGAVSDVFS 189 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS-----PRT-LPQM 230 ++ L A +G G + H +G VH+Y++ A+ L + PR P M Sbjct: 190 FTFLQEFTARYLGLGIGTYHHVVGSVHIYDSDARWAERVLDAATPDGGPRPGFPAM 245 >gi|229138942|ref|ZP_04267521.1| Thymidylate synthase [Bacillus cereus BDRD-ST26] gi|228644567|gb|EEL00820.1| Thymidylate synthase [Bacillus cereus BDRD-ST26] Length = 181 Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats. Identities = 63/170 (37%), Positives = 91/170 (53%), Gaps = 50/170 (29%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V ELLW Sbjct: 6 NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65 Query: 62 FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83 F++GD+N+ YL +H +IW+EW Sbjct: 66 FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125 Query: 84 ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 ++K G LG +YG QWR+W G +DQ+ +++ ++ Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKK 175 >gi|194450574|ref|YP_002048341.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|300925828|ref|ZP_07141676.1| thymidylate synthase [Escherichia coli MS 182-1] gi|194408878|gb|ACF69097.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|300418080|gb|EFK01391.1| thymidylate synthase [Escherichia coli MS 182-1] Length = 326 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 18/249 (7%) Query: 6 DLLRH----VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 DL+ ++ G D T T G + + T + S + E LW Sbjct: 12 DLINDVHQAILADGLS-NDPTKGSTLEILGAYLVLTDPRRRISRTESRGKLISCLGEFLW 70 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 +L +++ ++ +H + + E A+ DG++ YG + + + +Q+ +++ L+ Sbjct: 71 YLSAQNDLEFI-KHFIPRYAESAESDGKIHGGYGPRLFNMR----GLYNQLKNVINLLQE 125 Query: 122 DPYSRRHIVSAWNVALIDKMA-------LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 +RR ++ ++ + + PC QF V +L + RS D F+G+ Sbjct: 126 KKPTRRAVIQLFDASDLVPSKTEQREYVDIPCTISMQFIVRCEELHLFVCMRSNDAFMGL 185 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPRTLPQMIIN 233 P ++ ++++L ++A +IG + G + H + +HLY N E+ LQ TLP M Sbjct: 186 PHDVFAFTMLQELVARLIGCELGHYHHFVSSLHLYKNDLEKVKALQKEGFMSTLPVMGSM 245 Query: 234 PNIVDLLSF 242 P + L Sbjct: 246 PEMHSLDDI 254 >gi|312965796|ref|ZP_07780022.1| thymidylate synthase family protein [Escherichia coli 2362-75] gi|331669729|ref|ZP_08370575.1| conserved hypothetical protein [Escherichia coli TA271] gi|312289039|gb|EFR16933.1| thymidylate synthase family protein [Escherichia coli 2362-75] gi|331063397|gb|EGI35310.1| conserved hypothetical protein [Escherichia coli TA271] Length = 326 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 18/249 (7%) Query: 6 DLLRH----VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 DL+ ++ G D T T G + + T + S + E LW Sbjct: 12 DLINDVHQAILADGLS-NDPTKGSTLEILGAYLVLTDPRRRISRTESRGKLISCLGEFLW 70 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 +L +++ ++ +H + + E A+ DG++ YG + + + +Q+ +++ L+ Sbjct: 71 YLSAQNDLEFI-KHFIPRYAESAESDGKIHGGYGPRLFNMR----GLYNQLKNVINLLQE 125 Query: 122 DPYSRRHIVSAWNVALIDKMA-------LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 +RR ++ ++ + + PC QF V +L + RS D F+G+ Sbjct: 126 KKPTRRAVIQLFDASDLVPSKTEQREYVDIPCTISMQFIVRCEELHLFVCMRSNDAFMGL 185 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPRTLPQMIIN 233 P ++ ++++L ++A +IG + G + H + +HLY N E+ LQ TLP M Sbjct: 186 PHDVFAFTMLQELVARLIGCELGHYHHFVSSLHLYKNDLEKVKALQKEGFMSTLPVMGSM 245 Query: 234 PNIVDLLSF 242 P + L Sbjct: 246 PEMHSLDDI 254 >gi|82592529|sp|P0C0M4|TYSY_STAEP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase gi|886709|emb|CAA88268.1| thymidylate synthase [Staphylococcus epidermidis] Length = 97 Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 1/98 (1%) Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 S D+FLG+PFNIASY+LLT ++A G + GEFIHT GD H+Y+NH + QLSR Sbjct: 1 SADIFLGVPFNIASYALLTHLVAKECGLEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYL 60 Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 PQ+ IN + + YED L +YE H AI A ++V Sbjct: 61 PPQLKINTD-KSIFDINYEDLELINYESHPAIKAPIAV 97 >gi|56755327|gb|AAW25843.1| unknown [Schistosoma japonicum] Length = 111 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 4/101 (3%) Query: 167 SGDVFL----GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 S D+ GIPFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E Q+ R Sbjct: 10 SFDLCFRQGLGIPFNIASYALLTYMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKR 69 Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263 +PR P++ I + ++ F++EDF L Y+P+ + K++ Sbjct: 70 TPRPFPKLEIVREVENIDDFKFEDFKLIDYKPYPKLSMKMA 110 >gi|218185748|gb|EEC68175.1| hypothetical protein OsI_36122 [Oryza sativa Indica Group] Length = 404 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 12/113 (10%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 + YL+L+ +I+ G+ + DRTG GT S FG QMRF+L FPLLTTKKV W+ VV ELLW Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298 Query: 62 FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP 102 F+ G ++ L G+ IWD ++G+LGP+YG QWR + Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFG 351 >gi|322511193|gb|ADX06506.1| putative thymidylate synthase and pyrimidine hydroxymethylase [Organic Lake phycodnavirus 2] Length = 171 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 70/159 (44%), Positives = 87/159 (54%), Gaps = 14/159 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYL +++ + G R G T S G M F L P+LTTKKV K+ + EL Sbjct: 15 KQYLAIVKEICLSGHKIEGRNGF-TYSKHGACMSFSLENNTLPILTTKKVALKTCLKELF 73 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW--------PDYDGNVIDQI 112 WFL G +N L+R V IWD A+ +LGPIYG QWR + DY IDQI Sbjct: 74 WFLSGSTNNDVLNRQNVHIWDPHAETSNDLGPIYGHQWRHFNAPYVDCESDYTNQGIDQI 133 Query: 113 SSIVQSLRADP---YSRRHIVSAWNVALIDKMALPPCHC 148 I+ SL DP YSRR +VS+WN +DKM+LPPCH Sbjct: 134 QYIIDSL-NDPEKRYSRRLVVSSWNPCQLDKMSLPPCHI 171 >gi|307325213|ref|ZP_07604416.1| thymidylate synthase [Streptomyces violaceusniger Tu 4113] gi|306889017|gb|EFN20000.1| thymidylate synthase [Streptomyces violaceusniger Tu 4113] Length = 316 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 11/212 (5%) Query: 13 KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLL--TTKKVHWKSVVHELLWFLRGDSNVS 70 K G R G+ TR + + L T+ V+ V E +W L G + S Sbjct: 21 KSGEKVSPR-GMATREVRDVHLLLAQPRARLLYAPPTRIVNPAFAVAETVWHLSGS-DAS 78 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 ++ + + DG L YG + R+W +DQ++ +V+ L+ DP SRR ++ Sbjct: 79 WIFDYNERL--RQYADDGVLLGAYGPRMRNW----AGKVDQLARVVEILKEDPDSRRALI 132 Query: 131 SAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ A PC F+F++ +L R DV++G+P+++ Y++L ++A Sbjct: 133 QLYDPAQDAAGHKDVPCTLGFRFHLRADRLHMATMMRGQDVWIGMPYDVFFYTVLHELVA 192 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 + + GEF +G +H+Y+ H EQA+L S Sbjct: 193 GWLDAELGEFHLHVGSLHIYDEHVEQAELLTS 224 >gi|157368568|ref|YP_001476557.1| thymidylate synthase [Serratia proteamaculans 568] gi|157320332|gb|ABV39429.1| thymidylate synthase [Serratia proteamaculans 568] Length = 325 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 18/250 (7%) Query: 6 DLLRH----VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 DLL ++ G G G + + T + S + ELLW Sbjct: 12 DLLNDVHQAILTDGLWNTPTKGAN-IEILGAYLILTDPRRRISRTESRGKIISCLGELLW 70 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 +L +++ ++ H + + ++A+ DG + YG + S + +Q+ +++ L+ Sbjct: 71 YLSAQNDLDFIR-HFIPRYVKYAESDGRIHGGYGPRLFSMH----GLYNQLENVISLLQE 125 Query: 122 DPYSRRHIVSAWNVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174 +RR ++ ++ + + + A PC QF V L + RS D F+G+ Sbjct: 126 KRTTRRALIQLFDASDLVTDNPEQTEYADIPCTISLQFIVRQDALHLFVCMRSNDAFMGL 185 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPRTLPQMIIN 233 P ++ ++++L ++A + G + G + H + +H+Y HFEQ LQ TLP M Sbjct: 186 PHDVFAFTMLQELVARLTGCKLGHYHHFVSSLHIYEEHFEQVKALQQEGFMSTLPVMGDM 245 Query: 234 PNIVDLLSFR 243 P I L Sbjct: 246 PEIQSLKDIT 255 >gi|182678521|ref|YP_001832667.1| thymidylate synthase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634404|gb|ACB95178.1| thymidylate synthase [Beijerinckia indica subsp. indica ATCC 9039] Length = 342 Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 16/215 (7%) Query: 11 VIKFGSDRRDRTGVG----TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 + + G RT G T G +R + + + S + ELLW+L G Sbjct: 19 IKEHG-----RTNAGSRGNTVELLGVALRILKPRARISRSENRGKPFSAIGELLWYLSGL 73 Query: 67 SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126 ++++ + + D+ G + YG + R+ D IDQ +SI LR P SR Sbjct: 74 DTLAFIEPYVSAYRDDAVA--GVIQGAYGPRLRAMRD----GIDQFASIETLLRQKPNSR 127 Query: 127 RHIVSAWNVALID-KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLT 185 R ++ +N I + PC QF++ +G L + RS D + G+P ++ ++++ Sbjct: 128 RAVIQLFNAEDIATEHKEIPCTTTLQFHLRDGLLHMSVTMRSNDAYWGLPHDVFCFTMIQ 187 Query: 186 MMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 M+A +G + GE+ H +G +H+Y H D L Sbjct: 188 EMMARRLGVELGEYYHYVGSMHVYEKHLNHLDNYL 222 >gi|91785563|ref|YP_560769.1| thymidylate synthase [Burkholderia xenovorans LB400] gi|91689517|gb|ABE32717.1| thymidylate synthase [Burkholderia xenovorans LB400] Length = 354 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 15/225 (6%) Query: 6 DLLRHVI-----KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 DLLR V K GSD + T G + + + KK S + E L Sbjct: 10 DLLRKVYGRLLRKRGSDDINPTKGPATEINGALLVLKKPRARLSQSEKKNTLFSCLGEFL 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W+L G + ++ + D D G R + G DQ+ +++Q+LR Sbjct: 70 WYLAGSDKLDFIQYYISRYKDFSDDGKTVFG---AYGPRLFGPTSGT--DQVQNVIQTLR 124 Query: 121 ADPYSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175 A+ +SRR ++ ++ + + PC C QF++ N +L+ + RS D F+G+P Sbjct: 125 ANQHSRRAVIQLFHGDDLAANLVKRREDLPCTCTLQFFIRNYQLNAMVTMRSNDAFMGLP 184 Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 +I ++++L ++A +G + G++ H +G +HLY N+ + + L Sbjct: 185 HDIFAFTMLQELIARSLGVEVGQYKHAVGSLHLYANNTQAVNDYL 229 >gi|53722134|ref|YP_111119.1| thymidylate synthase protein [Burkholderia pseudomallei K96243] gi|76819171|ref|YP_335223.1| putative thymidylate synthase protein [Burkholderia pseudomallei 1710b] gi|126444953|ref|YP_001062559.1| putative thymidylate synthase [Burkholderia pseudomallei 668] gi|134283524|ref|ZP_01770224.1| putative thymidylate synthase [Burkholderia pseudomallei 305] gi|167723549|ref|ZP_02406785.1| putative thymidylate synthase [Burkholderia pseudomallei DM98] gi|167819685|ref|ZP_02451365.1| putative thymidylate synthase [Burkholderia pseudomallei 91] gi|167828063|ref|ZP_02459534.1| putative thymidylate synthase [Burkholderia pseudomallei 9] gi|167898126|ref|ZP_02485528.1| putative thymidylate synthase [Burkholderia pseudomallei 7894] gi|167914845|ref|ZP_02501936.1| putative thymidylate synthase [Burkholderia pseudomallei 112] gi|167922687|ref|ZP_02509778.1| putative thymidylate synthase [Burkholderia pseudomallei BCC215] gi|217418809|ref|ZP_03450316.1| putative thymidylate synthase [Burkholderia pseudomallei 576] gi|226198340|ref|ZP_03793910.1| putative thymidylate synthase [Burkholderia pseudomallei Pakistan 9] gi|254263271|ref|ZP_04954136.1| putative thymidylate synthase [Burkholderia pseudomallei 1710a] gi|254300441|ref|ZP_04967887.1| putative thymidylate synthase [Burkholderia pseudomallei 406e] gi|52212548|emb|CAH38574.1| putative thymidylate synthase protein [Burkholderia pseudomallei K96243] gi|76583644|gb|ABA53118.1| putative thymidylate synthase protein [Burkholderia pseudomallei 1710b] gi|126224444|gb|ABN87949.1| putative thymidylate synthase [Burkholderia pseudomallei 668] gi|134245273|gb|EBA45367.1| putative thymidylate synthase [Burkholderia pseudomallei 305] gi|157810077|gb|EDO87247.1| putative thymidylate synthase [Burkholderia pseudomallei 406e] gi|217398113|gb|EEC38128.1| putative thymidylate synthase [Burkholderia pseudomallei 576] gi|225929624|gb|EEH25641.1| putative thymidylate synthase [Burkholderia pseudomallei Pakistan 9] gi|254214273|gb|EET03658.1| putative thymidylate synthase [Burkholderia pseudomallei 1710a] Length = 329 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ + + L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L LAS +G + G + H +G +H+Y+++ + L Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228 >gi|167906492|ref|ZP_02493697.1| putative thymidylate synthase [Burkholderia pseudomallei NCTC 13177] Length = 329 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ + + L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L LAS +G + G + H +G +H+Y+++ + L Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228 >gi|183980062|ref|YP_001848353.1| thymidylate synthase, ThyA_1 [Mycobacterium marinum M] gi|183173388|gb|ACC38498.1| thymidylate synthase, ThyA_1 [Mycobacterium marinum M] Length = 316 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 14/222 (6%) Query: 6 DLLRH----VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 DLLR + + G T TR G + + T + ++ + +L W Sbjct: 12 DLLREAYTAIREQGQPVL-PTRAPTRELIGVSLELTEPRCRLSRTEARRLSRTGIAQLAW 70 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 +L G +N + H V + DG + YG R + D Q ++++ L+ Sbjct: 71 YLSGTTNPEMIL-HWVPNHRNELEADGTIHGAYG--PRMFGTGDNA---QFCTVLELLKT 124 Query: 122 DPYSRRHIVSAWNVALID---KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 SRR ++ ++ + + PC QF+V + +L + RS D ++G+P ++ Sbjct: 125 SSSSRRAVIQLFDATDLTGPGRYKDVPCTNTLQFFVRDSRLHLMVTMRSNDAYIGLPLDV 184 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 ++++L ++A +G G +IH++G +H+Y + E L Sbjct: 185 FAFTMLQELMAGELGIGIGRYIHSVGSLHIYEYNKEAIIDFL 226 >gi|237509869|ref|ZP_04522584.1| thymidylate synthase [Burkholderia pseudomallei MSHR346] gi|235002074|gb|EEP51498.1| thymidylate synthase [Burkholderia pseudomallei MSHR346] Length = 329 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ + + L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L LAS +G + G + H +G +H+Y+++ + L Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228 >gi|167742513|ref|ZP_02415287.1| putative thymidylate synthase [Burkholderia pseudomallei 14] Length = 236 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ + + L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L LAS +G + G + H +G +H+Y+++ + L Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228 >gi|126456897|ref|YP_001075509.1| putative thymidylate synthase [Burkholderia pseudomallei 1106a] gi|167849524|ref|ZP_02475032.1| putative thymidylate synthase [Burkholderia pseudomallei B7210] gi|254193553|ref|ZP_04899987.1| putative thymidylate synthase [Burkholderia pseudomallei S13] gi|126230665|gb|ABN94078.1| putative thymidylate synthase [Burkholderia pseudomallei 1106a] gi|169650306|gb|EDS82999.1| putative thymidylate synthase [Burkholderia pseudomallei S13] Length = 329 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGYAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ + + L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L LAS +G + G + H +G +H+Y+++ + L Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228 >gi|242311181|ref|ZP_04810198.1| putative thymidylate synthase [Burkholderia pseudomallei 1106b] gi|242134420|gb|EES20823.1| putative thymidylate synthase [Burkholderia pseudomallei 1106b] Length = 329 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGYAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + +DQI + L R Sbjct: 71 LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ + + L + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L LAS +G + G + H +G +H+Y+++ + L Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228 >gi|302556579|ref|ZP_07308921.1| thymidylate synthase [Streptomyces griseoflavus Tu4000] gi|302474197|gb|EFL37290.1| thymidylate synthase [Streptomyces griseoflavus Tu4000] Length = 316 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 16/226 (7%) Query: 13 KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLL--TTKKVHWKSVVHELLWFLRGDSNVS 70 K G R + T + + L + V+ V E +W L G + Sbjct: 21 KSGEKISPRD-MATHEVRDVHLLLTQPRARLLYAPPARIVNPAFAVAETVWHLSGS-DAP 78 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 ++ + + +G L YG + R+W +DQ++ +++ L+ADP SRR ++ Sbjct: 79 WIFDYNNRL--RQFADEGVLLGAYGPRMRNW----AGKVDQLARVIEILQADPDSRRALI 132 Query: 131 SAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ A PC F+F++ G+L R DV++G+P+++ Y++L ++A Sbjct: 133 QLYDPAQDAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWIGMPYDVFFYTVLHELVA 192 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235 + + GEF +G +H+Y+ H EQAD+ S LP I P+ Sbjct: 193 GWLDAELGEFHLHIGSLHIYDEHIEQADMLTS-----LPASEIMPD 233 >gi|255635545|gb|ACU18123.1| unknown [Glycine max] Length = 139 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 53/111 (47%), Positives = 68/111 (61%), Gaps = 12/111 (10%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YL L++ +I G+ + DRTG GT S FG QMRF+L FPLLTTKKV W+ VV ELLWF+ Sbjct: 11 YLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVEELLWFI 70 Query: 64 RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP 102 G +N L G+ IWD A ++G+LGP+YG QWR + Sbjct: 71 SGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFG 121 >gi|167565755|ref|ZP_02358671.1| putative thymidylate synthase [Burkholderia oklahomensis EO147] gi|167572854|ref|ZP_02365728.1| putative thymidylate synthase [Burkholderia oklahomensis C6786] Length = 329 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F +K + E LW+ Sbjct: 11 YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + +DQI V L R Sbjct: 71 LSGRNDLEFIEHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERSLDQIERAVDILSRD 127 Query: 122 DPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ + C Q + +G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEDLYRRNIDVSCTLGLQLLLRDGRLHTVAFMRANDAYIGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L +AS +G + G + H +G +H+Y+++ + L Sbjct: 188 SFTFLQEYVASRLGCEVGTYSHHVGSIHVYDDNLPRVQALL 228 >gi|90420526|ref|ZP_01228433.1| possible thymidylate synthase [Aurantimonas manganoxydans SI85-9A1] gi|90335254|gb|EAS49007.1| possible thymidylate synthase [Aurantimonas manganoxydans SI85-9A1] Length = 338 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 11/221 (4%) Query: 5 LDLLRHVIKFGSDRRDRTGV----GTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 L + + K G T GT G +R + + + S + ELL Sbjct: 13 HQLYQDIDKHGRQHGGGTRGNKLGGTVELLGVALRITNPRARISRSENRGKPFSALGELL 72 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W+L G + ++++ + ++ D G L YG ++ + IDQ SI + LR Sbjct: 73 WYLSGSNKLTFIKPYVSEYENDAVD--GVLEGAYGPRFLAMR----GEIDQFDSIERLLR 126 Query: 121 ADPYSRRHIVSAWNVALID-KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 P SRR +V +N I PC QF++ G+L + RS D + G+P ++ Sbjct: 127 RKPGSRRAVVQLFNAEDIATDHKEIPCTTTLQFHLREGRLHLSVTLRSNDAYWGLPHDVF 186 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 ++++ M+A + + GE+ +G +H+Y+ + L Sbjct: 187 CFTMIQEMMARRLEAELGEYYQYVGSMHVYDKYLPDMRAYL 227 >gi|239994617|ref|ZP_04715141.1| thymidylate synthase [Alteromonas macleodii ATCC 27126] Length = 88 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 58/88 (65%), Positives = 73/88 (82%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 +RHV G + DRTG GT S FGYQMRF+L +GFPL+TTKK H KS++HELLWFL+G++ Sbjct: 1 MRHVRDTGVKKEDRTGTGTLSVFGYQMRFNLQEGFPLVTTKKCHLKSIIHELLWFLKGET 60 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYG 95 N++YL HGVSIWDEWA ++GELGP+YG Sbjct: 61 NIAYLKEHGVSIWDEWATEEGELGPVYG 88 >gi|21700313|gb|AAM75816.1|AF450273_1 bifunctional dihydrofolate reductase-thymidylate synthase [Diplonema ambulator] Length = 255 Score = 131 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 13/114 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 QYLDL+ +IK G + DRTGVGT S FG QMRF L G PLLTTK+V WK V EL Sbjct: 141 QQYLDLVDDIIKNGFTKGDRTGVGTISKFGAQMRFSLRDGVIPLLTTKRVFWKGVAEELF 200 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP 102 WF++G +N L GV IWD + + +LGPIYG+QW + Sbjct: 201 WFIKGCTNGKDLKDKGVHIWDGNGTRAFLDSRGLPDRAEDDLGPIYGLQWSHFG 254 >gi|21700309|gb|AAM75814.1|AF450271_1 bifunctional dihydrofolate reductase-thymidylate synthase [Chlamydaster sterni] Length = 260 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 13/114 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 QYLDL+ +I G+ R DRTG GT S FG QMRF PLLTTKKV W+ V E+L Sbjct: 146 KQYLDLVDRIITSGTQRGDRTGTGTLSIFGTQMRFSPRDDTLPLLTTKKVFWRGVAEEML 205 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP 102 WF++G ++ L + IWD+ ++G+LGP+YG QWR + Sbjct: 206 WFMKGCTDARVLSAKKIHIWDDNASRKFLDENGLSHREEGDLGPVYGFQWRHFG 259 >gi|167839730|ref|ZP_02466414.1| putative thymidylate synthase [Burkholderia thailandensis MSMB43] Length = 329 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 93/221 (42%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62 YL LR V R G R GY R D + F ++ + E LW+ Sbjct: 11 YLSALRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARRQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + +DQI + L R Sbjct: 71 LSGRNDLEFIEHYAPSMARYSPDGKHLPGTGYGARLMHYG---ERALDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEDLYRRNIDVSCTLGLQLLLREGRLHLVAFMRANDAYVGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L +AS +G + G + H +G +H+Y+++ + L Sbjct: 188 SFTFLQEYVASRLGCEIGTYSHHVGSIHVYDDNLPRVRALL 228 >gi|256784563|ref|ZP_05522994.1| thymidylate synthase [Streptomyces lividans TK24] gi|289768447|ref|ZP_06527825.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289698646|gb|EFD66075.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 316 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 11/208 (5%) Query: 13 KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLL--TTKKVHWKSVVHELLWFLRGDSNVS 70 K G R G+ T + + + V+ V E +W L G + Sbjct: 21 KSGEKISPR-GMATHEVRDVHLLLTQPRARLFYAPPARIVNPAFAVAETVWHLSGS-DAP 78 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 ++ + + DG L YG + R+W G +DQ++ +V+ L+AD SRR ++ Sbjct: 79 WIFDYNNRL--RQFADDGVLLGAYGPRMRNW----GGKVDQLARVVEILQADSDSRRALI 132 Query: 131 SAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ A PC F+F++ G+L R DV++G+P+++ Y++L ++A Sbjct: 133 QLYDPAQDAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWIGMPYDVFFYTVLHELVA 192 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 + + GEF +G +H+Y+ H EQAD Sbjct: 193 GWLDAELGEFHLHIGSLHIYDEHIEQAD 220 >gi|29135171|ref|NP_803801.1| ORF235 [Pseudomonas phage phiKZ] gi|18996700|gb|AAL83136.1|AF399011_235 PHIKZ235 [Pseudomonas phage phiKZ] Length = 488 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 17/156 (10%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 Q+ ++++ R + V W +D+ P +SCQLYQRS D Sbjct: 348 QVKALLRVCRGYEKATDEAVVEW----LDQHGAP-----------KRAISCQLYQRSCDT 392 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 FLG PFNI YSLLT MLA+ + EFI T GDVH+Y+NH EQ DLQL+R P+ LP + Sbjct: 393 FLGKPFNITFYSLLTHMLANQMNMIAEEFIWTGGDVHIYSNHQEQTDLQLTREPKVLPTI 452 Query: 231 IINPNI--VDLLSFRYEDFTLRSYEPHAAILAKVSV 264 D+ +DF + +YE H+ I KV+V Sbjct: 453 RFKQEAIGKDIREIGVDDFVIENYEYHSHIAGKVAV 488 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHEL 59 M QYL+ +R V + G + DRTG GT+S FG Q R+ L P++TTKK+H SV+HEL Sbjct: 1 MEQYLNSIRLVKEHGVHKGDRTGTGTQSMFGQQERYSLRNNRLPVVTTKKIHLASVIHEL 60 Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93 W L GD+ V YL +GV IW+EW + + Sbjct: 61 FWMLSGDTKVDYLIANGVRIWNEWVKPETAVYEP 94 >gi|269968966|ref|ZP_06182902.1| Thymidylate synthase [Vibrio alginolyticus 40B] gi|269826423|gb|EEZ80821.1| Thymidylate synthase [Vibrio alginolyticus 40B] Length = 130 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 5/130 (3%) Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 L PC F + + L QRS DV LG+ FN+ + ++A + G + G+ Sbjct: 1 MGCLRPCMYSHHFSLLDDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQA 60 Query: 200 IHTLGDVHLYNNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSF----RYEDFTLRSYEP 254 H + + H+Y + E D+QL R P P INP I L +DF + YE Sbjct: 61 FHKIVNAHIYEDQLELMRDVQLKREPLKAPTFHINPEIKSLEDLETWVTLDDFWVEGYEH 120 Query: 255 HAAILAKVSV 264 H I SV Sbjct: 121 HDPIRYPFSV 130 >gi|296531913|ref|ZP_06894716.1| thymidylate synthase [Roseomonas cervicalis ATCC 49957] gi|296267779|gb|EFH13601.1| thymidylate synthase [Roseomonas cervicalis ATCC 49957] Length = 351 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 111/252 (44%), Gaps = 19/252 (7%) Query: 6 DLLRHVIKFGSDR----RDRT--GVG-TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58 D L ++ R + RT G G R G ++ + T + S + E Sbjct: 6 DTLDDALRQAFTRLLSSKTRTSSGKGPAREIIGAILKIRNPRARFSRTENRAVLFSCLGE 65 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118 LW+L G ++++++ + K G G R + + + ++ +++ Sbjct: 66 TLWYLSGSNSLAHITYYIKKYRKLSGAKKGARLASGGYGPRIFGSGNKSQMNAAIQLIRR 125 Query: 119 LRADPY----SRRHIVSAWN-VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 ADP +R+ ++ ++ + L+ + PC C QF G+L ++ RS D ++G Sbjct: 126 KLADPDGKTDTRQAVIQIYDKLDLLRNSSDVPCTCTMQFLPRRGRLHMVVHMRSNDAYIG 185 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL-----SRSPRTLP 228 +P ++ +++ + ++A +G + G + H++G +HLY++ +A L SR+ +P Sbjct: 186 LPHDVFAFTFMQEIVAREVGLELGTYTHSVGSLHLYDHDERRARDFLAEGWQSRT--EMP 243 Query: 229 QMIINPNIVDLL 240 M I + Sbjct: 244 AMPIGDPWPSID 255 >gi|154685031|ref|YP_001420192.1| hypothetical protein RBAM_005690 [Bacillus amyloliquefaciens FZB42] gi|154350882|gb|ABS72961.1| hypothetical protein RBAM_005690 [Bacillus amyloliquefaciens FZB42] Length = 336 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 105/253 (41%), Gaps = 13/253 (5%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 Y + L + G +R Y + + + L+++K + E+LW+ Sbjct: 10 YTETLYDIYHNPEFFNSPRGQKSREQLNYHLTLENPIERVTYLSSRKTNIVFNFAEVLWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ ++ + + +K G YG + + + N ++I +++ D Sbjct: 70 LSGSNDLDFISYYNKKMPSYSMNKKTLTGTAYGPKIFEFGNAKLNQWNRIKNLLTQ--ED 127 Query: 123 PYSRRHIVSAWNVALID--KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+R + ++ + + + C QF+V G+L R+ D F G+ ++ S Sbjct: 128 IDSKRAFIQIFDASELFVLENIDVSCTIGLQFFVREGELYMSSVMRANDAFRGMISDLFS 187 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS-------PRTLPQMIIN 233 ++ + ++A + + GE+ H G +H+Y++ E A L + P+M Sbjct: 188 FTFMQELMARELRLEVGEYFHNAGSIHIYDSDHEWAKTVLEEAENHHDIPEFEFPKMPEG 247 Query: 234 PNIVDLLS-FRYE 245 N + + +YE Sbjct: 248 NNWPSIETVLKYE 260 >gi|145244279|gb|ABP49090.1| putative thymidylate synthase [Streptomyces lividans] Length = 308 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 11/208 (5%) Query: 13 KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLL--TTKKVHWKSVVHELLWFLRGDSNVS 70 K G R G+ T + + + V+ V E +W L G + Sbjct: 13 KSGEKISPR-GMATHEVRDVHLLLTQPRARLFYAPPARIVNPAFAVAETVWHLSGS-DAP 70 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 ++ + + DG L YG + R+W G +DQ++ +V+ L+AD SRR ++ Sbjct: 71 WIFDYNYRL--RQFADDGVLLGAYGPRMRNW----GGKVDQLARVVEILQADSDSRRALI 124 Query: 131 SAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 ++ A PC F+F++ G+L R DV++G+P+++ Y++L ++A Sbjct: 125 QLYDPAQDAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWIGMPYDVFFYTVLHELVA 184 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 + + GEF +G +H+Y+ H EQAD Sbjct: 185 GWLDAELGEFHLHIGSLHIYDEHIEQAD 212 >gi|21700305|gb|AAM75812.1|AF450269_1 bifunctional dihydrofolate reductase-thymidylate synthase [cf. 'Cafeteria' marsupialis 'Wood's Hole'] Length = 268 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 13/113 (11%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61 QYL+ +R ++ G DR DRTG GT S FG MRF L PL+TTKKV W+ VV ELLW Sbjct: 155 QYLNAIRDILDNGVDRSDRTGTGTLSKFGLHMRFSLRDNTLPLITTKKVFWRGVVEELLW 214 Query: 62 FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP 102 F+RG ++ L GV IWD + +++G+LGP+YG QW + Sbjct: 215 FVRGFTDSKLLSAKGVHIWDGNGSREYLDSRGLFHNEEGDLGPVYGFQWSHFG 267 >gi|33304365|gb|AAQ02620.1| thymidylate synthase [Hartmannella cantabrigiensis] Length = 136 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 13/114 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+++ +I+ G + DRTGVGT S FG QMRF L G FPLLTTK+V WK VV ELL Sbjct: 11 YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP 102 WF+RGD+N + L + GV IWD ++ +LGP+YG QWR + Sbjct: 71 WFIRGDTNGANLSKKGVKIWDANGSRQFLDSRGLTQREENDLGPVYGFQWRHFG 124 >gi|170694064|ref|ZP_02885220.1| thymidylate synthase [Burkholderia graminis C4D1M] gi|170141136|gb|EDT09308.1| thymidylate synthase [Burkholderia graminis C4D1M] Length = 353 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 95/204 (46%), Gaps = 11/204 (5%) Query: 22 TGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81 G T +G + + + +K S + E LW+L G + + ++ + + + Sbjct: 32 KGTNT-EIYGALLLLKNPRARLSQSERKNTVFSCLGEFLWYLSGSNKLDFIQ-YYIKSYS 89 Query: 82 EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 E++D + + YG + +Q+ +++++LRA SRR + ++ + + Sbjct: 90 EFSDDNETIFGAYGPRLFG----SDKAPNQVQNVIETLRASSTSRRAAIQLYHGEDLAQN 145 Query: 142 -----ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196 PC C QF V + +L + RS D F+G+P +I ++++L ++A +G + Sbjct: 146 LEKRRKDLPCTCTLQFTVRDHQLHAMVMMRSNDAFMGLPHDIFAFTMLQELIARSLGVEV 205 Query: 197 GEFIHTLGDVHLYNNHFEQADLQL 220 G++ H +G +HLY + L Sbjct: 206 GQYKHAVGSLHLYATDIQSVLDYL 229 >gi|296111884|ref|YP_003622266.1| putative thymidylate synthase protein [Leuconostoc kimchii IMSNU 11154] gi|295833416|gb|ADG41297.1| putative thymidylate synthase protein [Leuconostoc kimchii IMSNU 11154] Length = 332 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 95/242 (39%), Gaps = 9/242 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTK-KVHWKSVVHELLWF 62 Y+ +L + G +R Y R + + K K + E+LW+ Sbjct: 11 YMSVLNDIYNHADFFNQPRGFQSREKIAYHFRINQPVQRGIYNQKRKCNIIFNFAEVLWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G++ + Y+ + + D D G YG + + G Q ++ L D Sbjct: 71 LTGNNRLDYISYYNKKMPDYSMDGRILTGTAYGSKLF---NDKGQQSSQWQNVKDLLIKD 127 Query: 123 PYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P S+R ++ ++ + + C QF++ + L Y R+ D F GI ++ S Sbjct: 128 PDSKRAVLQIFDGSELAIPNNLDVSCTLGLQFFIRDNHLDMIAYMRANDAFRGIVSDVFS 187 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS---RSPRTLPQMIINPNIV 237 ++ + ++A + G++ H++G +H+Y L + P+M + N Sbjct: 188 FTFIQELMARELHIPVGKYYHSVGTMHIYEPDNLWVTHVLETPNEAQFKFPEMPLENNWD 247 Query: 238 DL 239 + Sbjct: 248 MI 249 >gi|255023190|ref|ZP_05295176.1| thymidylate synthase [Listeria monocytogenes FSL J1-208] Length = 87 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 52/86 (60%), Positives = 69/86 (80%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK 86 WFL GD+N+ YL +H +IW+EWA + Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFE 86 >gi|209972965|ref|YP_002300412.1| gp29 [Bacillus phage SPO1] gi|209871285|gb|ACI91041.1| gp29 [Bacillus phage SPO1] Length = 383 Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 12/220 (5%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 Y+D+L VIK G R G + + F + + L + ++ V E LW Sbjct: 13 YMDILSTVIKEGDVLAPR-GKRIKEIRPVMIEFKNPIRRTTFLKGRNINPFFQVAESLWI 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI-----DQISSIVQ 117 L G S+V +L + ++ +++D YG + R W D N DQ+ + + Sbjct: 72 LAGRSDVGFLLDYNKNMG-QFSDDGVFFNAPYGERLRFWNRSDANNFIYNPLDQLRDVYE 130 Query: 118 SLRADPYSRRHIVSAWNVALID---KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG- 173 ++ADP +R+ + +N + PC+ L F + NGKL +Y RS D+ G Sbjct: 131 KIKADPDTRQAVAVIYNPLFDNINNDTKDRPCNLLLSFKLRNGKLDLSVYNRSNDLHWGT 190 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 N+ +S + +A+ +G + G + +H+Y + + Sbjct: 191 FGANLCQFSTILEAMATWLGVEVGSYYQITDSLHVYLDDY 230 >gi|310722252|ref|YP_003969076.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4] gi|306021095|gb|ADM79630.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4] Length = 105 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 4/106 (3%) Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 QRS DV LG+PFNIASY+LL ++A + + GE + + DVH+Y NH LS Sbjct: 1 MWSQRSVDVGLGLPFNIASYALLVHIVARICNLEVGELVFSGADVHIYENHLSHLGGMLS 60 Query: 222 RSPRTLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264 R R LP + P+I L DF L Y+PH I ++V Sbjct: 61 REERPLPTLSF-PDIDSLSDLRLLEAADFRLDGYDPHPTIKLPMAV 105 >gi|399407|sp|P31654|DUHM_BPSP1 RecName: Full=Deoxyuridylate hydroxymethyltransferase; Short=Deoxyuridylate hydroxymethylase; AltName: Full=dUMP hydroxymethylase; Short=dUMP-HMase gi|14871|emb|CAA43136.1| 29 [Bacillus phage SPO1] Length = 383 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 12/220 (5%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 Y+D+L VIK G R G + + F + + L + ++ V E LW Sbjct: 13 YMDILSTVIKEGDVLAPR-GKRIKEIRPVMIEFKNPIRRTTFLKGRNINPFFQVAESLWI 71 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI-----DQISSIVQ 117 L G S+V +L + ++ +++D YG + R W D N DQ+ + + Sbjct: 72 LAGRSDVGFLLDYNKNMG-QFSDDGVFFNAPYGERLRFWNRSDANNFIYNPLDQLRDVYE 130 Query: 118 SLRADPYSRRHIVSAWNVALID---KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG- 173 ++ADP +R+ + +N + PC+ L F + NGKL +Y RS D+ G Sbjct: 131 KIKADPDTRQAVAVIYNPLFDNINNDTKDRPCNLLLSFKLRNGKLDLSVYNRSNDLHWGT 190 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213 N+ +S + +A+ +G + G + +H+Y + + Sbjct: 191 FGANLCQFSTILEAMATWLGVEVGSYYQITDSLHVYLDDY 230 >gi|207727475|ref|YP_002255869.1| putative thymidylate synthase protein [Ralstonia solanacearum MolK2] gi|206590712|emb|CAQ56324.1| putative thymidylate synthase protein [Ralstonia solanacearum MolK2] Length = 294 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 90/240 (37%), Gaps = 10/240 (4%) Query: 12 IKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70 ++ G R GV T D + + L ++ + EL W LRG S V Sbjct: 5 LQNGQRTAPR-GVATLELLPVAFTINDPRRRYVSLPPRRWSIVYAIGELCWHLRGSSLVD 63 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 + + + G YG + Q S ++ LR D SRR ++ Sbjct: 64 EIAYYASRWRTIAGNATEVTGSNYGAKIFKGHR---GAPSQWSRVINQLRIDRDSRRAVL 120 Query: 131 SAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 C QF + +GKL RS D LG+P+++ +S+L M Sbjct: 121 YFSGTGEDTSSDSKDIACAVSLQFLIRDGKLDAIANMRSNDAMLGLPYDVFLFSMLQEMA 180 Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS---RSPRTLPQMIINPNIVDLLSFRYE 245 A+ +G G++ H G +HLY + A +S R +P+M + LL E Sbjct: 181 ANSLGVDVGKYNHVAGSLHLYESDLLLAKDIISSRASEIRPMPRMEGLSALPSLLEGEAE 240 >gi|299142236|ref|ZP_07035369.1| thymidylate synthase [Prevotella oris C735] gi|298576325|gb|EFI48198.1| thymidylate synthase [Prevotella oris C735] Length = 212 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y ++L+ +I G + +R G R Q+ + + + K + +EL Sbjct: 1 MNKYHEILKRIIVSGKTQHNRKGC-IRYLLNEQLSLSPVDLLDIFESHGIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD V S+P Y + I+ I + R Sbjct: 60 LFMQGERQVQKYREVGINWWDY----------CGSVLVNSYPTYFEKLPPLIAKINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D+G+L YQRS D LG+P +I Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L +A I LG+VH+Y N+ E+ L L Sbjct: 165 LYL----MAQQIDLPLKNITLNLGNVHIYENNLERTRLLL 200 >gi|21700303|gb|AAM75811.1|AF450268_1 bifunctional dihydrofolate reductase-thymidylate synthase [Amastigomonas debruynei] Length = 259 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 52/111 (46%), Positives = 69/111 (62%), Gaps = 12/111 (10%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 YLDL+R V+ G +R DRTGVGT S FG ++ FDL GFPLLTTK+V W+ V ELLWF+ Sbjct: 148 YLDLIRRVLADGFERDDRTGVGTFSLFGEKLEFDLGDGFPLLTTKRVFWRGVAEELLWFV 207 Query: 64 RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP 102 G +N + L G+ IWD + ++ G+LGP+YG QW + Sbjct: 208 SGSTNANELAAKGIRIWDGNSSREYLDSIGLTEREVGDLGPVYGFQWSHFG 258 >gi|329957058|ref|ZP_08297625.1| thymidylate synthase [Bacteroides clarus YIT 12056] gi|328523326|gb|EGF50425.1| thymidylate synthase [Bacteroides clarus YIT 12056] Length = 239 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + ++ G + Q+ + + + K + +EL Sbjct: 28 MNKYYCILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRNELQ 86 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ NV G++ WD + S+P Y + I+ I + R Sbjct: 87 LFMQGERNVEKYREVGINWWDY----------CGSILVNSYPTYFEKLPPLIAKINREKR 136 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D+G+L YQRS D LG+P +I Sbjct: 137 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPSDIYH 191 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L +A I LG+VH+Y N+ L + Sbjct: 192 LYL----MARQIELPLKSITLYLGNVHIYENNIPGTRLLI 227 >gi|317504674|ref|ZP_07962639.1| thymidylate synthase [Prevotella salivae DSM 15606] gi|315664201|gb|EFV03903.1| thymidylate synthase [Prevotella salivae DSM 15606] Length = 212 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L +++ G + ++ G R Q+ + + + + K + +EL Sbjct: 1 MNKYYQMLDKILEQGKPQANKKG-NIRYLLNEQLSLSPADLLDIFESHGIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD V S+P Y + I+ I + R Sbjct: 60 LFMQGERQVEKYREVGINWWDY----------CGSVLVNSYPTYFEKLPPLIAKINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D+G+L YQRS D LG+P +I Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L +A I LG+VH+Y N+ + L Sbjct: 165 LYL----MARQIDLPLKNITLNLGNVHIYENNINRTKQLL 200 >gi|116618549|ref|YP_818920.1| thymidylate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097396|gb|ABJ62547.1| thymidylate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 335 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 96/221 (43%), Gaps = 6/221 (2%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLT-TKKVHWKSVVHELLWF 62 Y+ L + + G +R G + + + + T+K + E LW+ Sbjct: 11 YIAELNEIYHHAEFFNEPRGFSSREKLGVHFKIENPVQRIVYSQTRKTNIIFNFAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G++++SY+ + + D D G YG + + ++Q ++ Q L D Sbjct: 71 LTGNNSLSYISYYNKRMPDYSMDGQTLTGTAYGKKLFHFG---EQNLNQWQNVKQELLND 127 Query: 123 PYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+R ++ ++ + ++ C QF + N +L+ Y R+ D F GI +I S Sbjct: 128 ADSKRAVIQIFDAHELTINQNLDVSCTLGLQFLIRNNQLNMVAYMRANDAFRGIVSDIFS 187 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 ++ + +A + + G++ H++G +H+Y + L+ Sbjct: 188 FTFIQEFMARELNLKVGKYYHSVGTMHIYEPDNQWVTHVLN 228 >gi|33304359|gb|AAQ02616.1| thymidylate synthase [Hartmannella cantabrigiensis] Length = 136 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 13/114 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+++ +I+ G + DRTGVGT S FG QMRF L G FPLLTTK+V WK VV ELL Sbjct: 11 YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP 102 WF+RGD N + L + GV IWD ++ +LGP+YG QWR + Sbjct: 71 WFIRGDINGANLSKKGVKIWDANGSRQFLDSRGLTQREENDLGPVYGFQWRHFG 124 >gi|83747574|ref|ZP_00944611.1| Deoxyuridylate hydroxymethyltransferase [Ralstonia solanacearum UW551] gi|83725754|gb|EAP72895.1| Deoxyuridylate hydroxymethyltransferase [Ralstonia solanacearum UW551] Length = 352 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 98/196 (50%), Gaps = 11/196 (5%) Query: 26 TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD 85 G ++ + T ++ S + E LW+L G + +S++ + +S +DE++D Sbjct: 33 CSDLHGVLLQIRNPRARVSRTEQRSTLFSCLGEFLWYLAGSNELSFIQ-YYISRYDEFSD 91 Query: 86 KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID-----K 140 + YG + ++ ++Q+S++++ L + +RR ++ +N + Sbjct: 92 DGNTVHGAYGPRL-----FNMRGVNQVSNVIEKLSGNNDTRRAVIQLFNAEDLGCDVAVG 146 Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 PC C QF + +L + RS D +LG+P +I ++++L ++A +G + G + Sbjct: 147 RKDIPCTCTMQFSLRARQLHMFVTMRSNDAYLGLPHDIFAFTMLQEIVARAVGAELGTYK 206 Query: 201 HTLGDVHLYNNHFEQA 216 H +G +HLY+ + +QA Sbjct: 207 HAVGSLHLYSKNTDQA 222 >gi|319643105|ref|ZP_07997736.1| hypothetical protein HMPREF9011_03337 [Bacteroides sp. 3_1_40A] gi|317385273|gb|EFV66221.1| hypothetical protein HMPREF9011_03337 [Bacteroides sp. 3_1_40A] Length = 212 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L V+ G + ++ G R Q+ + + + K + +EL Sbjct: 1 MNKYYQILGKVLSSGKMQSNKKG-NIRYLLNEQLTLLPADLLDIFEGHTIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F+RG+ NV G++ WD + S+P Y + I I + R Sbjct: 60 LFMRGERNVEKYREVGINWWDY----------CGSILVNSYPTYFEKLPPLIERINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +I+ + A PC L QF ++ G+L YQRS D LG+P +I Sbjct: 110 N---SKNYILFLGSTGTESNQA--PCLSLVQFQIEQGELVMTAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 L ++ I LG+VH+Y N+ ++ + LS Sbjct: 165 LYL----ISRQIELPLKSITLNLGNVHIYENNIDKTEQLLS 201 >gi|33304368|gb|AAQ02622.1| thymidylate synthase [Hartmannella cantabrigiensis] Length = 136 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 13/114 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+++ +I+ G + DRTGVGT S FG QMRF L G FPLLTTK+V WK VV ELL Sbjct: 11 YQYLEMIDDIIRHGVRKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP 102 WF+RGD+N + L + G IWD ++ +LGP+YG QWR + Sbjct: 71 WFIRGDTNGANLSKKGDKIWDANGSRQFLDSRGLTHREENDLGPVYGFQWRHFG 124 >gi|255010683|ref|ZP_05282809.1| thymidylate synthase [Bacteroides fragilis 3_1_12] Length = 212 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L V+ G + +R G R ++ + + + K + EL Sbjct: 1 MNKYYQILGRVLASGKTQTNRKG-NIRYLLNERLTLTPADLLDIFEGHPIARKKLKDELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ NV G++ WD + S+P Y + +++ + Sbjct: 60 LFMQGERNVEKYREAGINWWDY----------CGSILVNSYPTYLEK----LPPLIERIN 105 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + S ++ V + PC L QF ++ G+L YQRS D LG+P +I Sbjct: 106 REKRSSKNYVLFLGSTDAESNQ-APCLSLVQFQIEQGELVMTAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L ++ I LG+VH+Y N+ + + L Sbjct: 165 LYL----MSRQIDLPLKSITLNLGNVHIYENNISRTEQLL 200 >gi|311278400|ref|YP_003940631.1| thymidylate synthase [Enterobacter cloacae SCF1] gi|308747595|gb|ADO47347.1| thymidylate synthase [Enterobacter cloacae SCF1] Length = 593 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 110/248 (44%), Gaps = 26/248 (10%) Query: 22 TGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81 G T G ++ + + T K S + ELLW++ G ++ ++ + + ++ Sbjct: 30 KGKAT-EITGVLIKINNPRARLSRTEGKGKVFSALGELLWYMSGLHDLEFIR-YYIPKYN 87 Query: 82 EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI-DK 140 ++D + + G R + + +Q ++Q LR SR+ I+ ++ + +K Sbjct: 88 CFSDDNKTIY--GGYGPRIFGND-----NQFMRVIQLLREKKDSRQAIIQIFHSDDLKEK 140 Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 PC C QF + N KLS + RS DVFLG P ++ +++++ AS++G G++ Sbjct: 141 HKDIPCTCTLQFILRNNKLSLIVNMRSNDVFLGFPHDVFAFTMIQEYAASILGCDLGDYK 200 Query: 201 HTLGDVHLYNNHFEQADLQLSR------SPRTLPQ----------MIINPNIVDLLSFRY 244 H +G +HLY+ H +A ++ ++P+ + I + + Sbjct: 201 HFVGSLHLYDEHRIKAQGYINEGWQEVIEMPSMPKDNVENNLNILLKKENEIRNNIDIDI 260 Query: 245 EDFTLRSY 252 + L Y Sbjct: 261 DKLELNDY 268 >gi|313148493|ref|ZP_07810686.1| predicted protein [Bacteroides fragilis 3_1_12] gi|313137260|gb|EFR54620.1| predicted protein [Bacteroides fragilis 3_1_12] Length = 240 Score = 124 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L V+ G + +R G R ++ + + + K + EL Sbjct: 29 MNKYYQILGRVLASGKTQTNRKG-NIRYLLNERLTLTPADLLDIFEGHPIARKKLKDELQ 87 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ NV G++ WD + S+P Y + +++ + Sbjct: 88 LFMQGERNVEKYREAGINWWDY----------CGSILVNSYPTYLEK----LPPLIERIN 133 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + S ++ V + PC L QF ++ G+L YQRS D LG+P +I Sbjct: 134 REKRSSKNYVLFLGSTDAESNQ-APCLSLVQFQIEQGELVMTAYQRSSDANLGLPADIYH 192 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L ++ I LG+VH+Y N+ + + L Sbjct: 193 LYL----MSRQIDLPLKSITLNLGNVHIYENNISRTEQLL 228 >gi|187777878|ref|ZP_02994351.1| hypothetical protein CLOSPO_01470 [Clostridium sporogenes ATCC 15579] gi|187774806|gb|EDU38608.1| hypothetical protein CLOSPO_01470 [Clostridium sporogenes ATCC 15579] Length = 328 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 11/244 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL L V G ++ Y M + + ++K + E LW+ Sbjct: 14 YLKNLNDVYYNPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 73 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ Y+ + ++ D G YG + S+ + I+Q I++ + D Sbjct: 74 LSGSNDLDYISYYASNMKKYSMDGKILTGTAYGPKIFSYGHNN---INQWHRIIELFKED 130 Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P ++R + + N L K C FQF++ +L + R+ D + GI ++ S Sbjct: 131 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHELYMTTFMRANDAYRGIISDVFS 190 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235 ++ + LA+ + G++ H + H+Y F+ A+ LS + P+M + Sbjct: 191 FTFIQEFLATELNLDVGQYSHNVATTHIYEPDFKLAEKVLSESKSAKKELYFPRMPKKDS 250 Query: 236 IVDL 239 DL Sbjct: 251 WQDL 254 >gi|170758959|ref|YP_001786125.1| thymidylate synthase [Clostridium botulinum A3 str. Loch Maree] gi|169405948|gb|ACA54359.1| thymidylate synthase [Clostridium botulinum A3 str. Loch Maree] Length = 324 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 100/244 (40%), Gaps = 11/244 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 Y+ L V G ++ Y M + + ++K + E LW+ Sbjct: 10 YIKNLNDVYYNPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ Y+ + ++ D G YG + S+ + ++Q I++ + D Sbjct: 70 LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYGHNN---VNQWHRIIELFKED 126 Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P ++R + + N L K C FQF++ KL + R+ D + GI ++ S Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235 ++ + LA+ + G++ H + H+Y F+ A+ L + + P+M N Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246 Query: 236 IVDL 239 DL Sbjct: 247 WEDL 250 >gi|153939390|ref|YP_001390126.1| thymidylate synthase [Clostridium botulinum F str. Langeland] gi|152935286|gb|ABS40784.1| thymidylate synthase [Clostridium botulinum F str. Langeland] gi|295318216|gb|ADF98593.1| thymidylate synthase [Clostridium botulinum F str. 230613] Length = 324 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 11/244 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL L V G ++ Y M + + ++K + E LW+ Sbjct: 10 YLRNLNDVYYTPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ Y+ + ++ D G YG + S+ + I+Q I++ + D Sbjct: 70 LSGSNDLDYISYYASNMKKYSMDGKILTGTAYGPKIFSYGHNN---INQWHRIIELFKED 126 Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P ++R + + N L K C FQF++ KL + R+ D + GI ++ S Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235 ++ + LA+ + G++ H + H+Y F+ A+ L + + P+M N Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSDKKELSFPRMPKKDN 246 Query: 236 IVDL 239 DL Sbjct: 247 WEDL 250 >gi|33304362|gb|AAQ02618.1| thymidylate synthase [Hartmannella cantabrigiensis] Length = 136 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 13/114 (11%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60 +QYL+++ +I+ G + DRTGVGT S FG QMRF L G FPLLTTK+V WK VV ELL Sbjct: 11 YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP 102 WF+RGD+N + L + GV I D ++ +LGP+YG QWR + Sbjct: 71 WFIRGDTNGANLSKKGVKICDANGSRQFLDSRGLTQREENDLGPVYGFQWRHFG 124 >gi|170755095|ref|YP_001780402.1| thymidylate synthase [Clostridium botulinum B1 str. Okra] gi|169120307|gb|ACA44143.1| thymidylate synthase [Clostridium botulinum B1 str. Okra] Length = 324 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 11/244 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL L V G ++ Y M + + ++K + E LW+ Sbjct: 10 YLRNLNDVYYTPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ Y+ + ++ D G YG + S+ + N I+Q + I++ + D Sbjct: 70 LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSY---EYNKINQWNRIIKLFKED 126 Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P ++R + + N L K C FQF++ KL + R+ D + GI ++ S Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIRERKLYMTTFMRANDAYRGIISDVFS 186 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235 ++ + LA+ + G++ H + H+Y F+ A+ L + + P+M N Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246 Query: 236 IVDL 239 DL Sbjct: 247 WEDL 250 >gi|226948057|ref|YP_002803148.1| thymidylate synthase [Clostridium botulinum A2 str. Kyoto] gi|226843129|gb|ACO85795.1| thymidylate synthase [Clostridium botulinum A2 str. Kyoto] Length = 324 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 11/244 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL L V G ++ Y M + + ++K + E LW+ Sbjct: 10 YLRNLNDVYYTPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ Y+ + ++ D G YG + S+ N I+Q + I++ + D Sbjct: 70 LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYG---YNKINQWNRIIKLFKED 126 Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P ++R + + N L K C FQF++ KL + R+ D + GI ++ S Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235 ++ + LA+ + G++ H + H+Y F+ A+ L + + P+M N Sbjct: 187 FTFIQEFLAAELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246 Query: 236 IVDL 239 DL Sbjct: 247 WEDL 250 >gi|254884020|ref|ZP_05256730.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|294778521|ref|ZP_06743944.1| thymidylate synthase [Bacteroides vulgatus PC510] gi|254836813|gb|EET17122.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|294447783|gb|EFG16360.1| thymidylate synthase [Bacteroides vulgatus PC510] Length = 214 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + ++ G + Q+ + + + K + EL Sbjct: 3 MNKYYRILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHHIARKKLRSELQ 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ NV G++ WD + S+P Y + I+ I + R Sbjct: 62 LFMQGERNVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIAKINRERR 111 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D G+L YQRS D LG+P +I Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDIYH 166 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L +A I LG+VH+Y N+ + L Sbjct: 167 LYL----MARQIELPLKSITLYLGNVHIYENNIQGTRALL 202 >gi|53728853|ref|ZP_00134736.2| COG0207: Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 146 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 5/114 (4%) Query: 156 NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE- 214 +G L QRS +V LG+ +N+ ++A + G + G+ H + + H+Y + E Sbjct: 33 DGTLYLNSTQRSANVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQLEL 92 Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 D+QL R P P++ INP I L +DF + YE H AI SV Sbjct: 93 MRDVQLKRKPLASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 146 >gi|168178163|ref|ZP_02612827.1| thymidylate synthase [Clostridium botulinum NCTC 2916] gi|182670584|gb|EDT82558.1| thymidylate synthase [Clostridium botulinum NCTC 2916] Length = 324 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 11/244 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL L V G ++ Y M + + ++K + E LW+ Sbjct: 10 YLKNLNDVYYTPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ Y+ + ++ D G YG + S+ + +Q IV+ + D Sbjct: 70 LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYGHNNA---NQWHRIVELFKED 126 Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P ++R + + N L K C FQF++ KL + R+ D + GI ++ S Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235 ++ + LA+ + G++ H + H+Y F+ A+ L + + P+M N Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246 Query: 236 IVDL 239 DL Sbjct: 247 WEDL 250 >gi|254882962|ref|ZP_05255672.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|298383655|ref|ZP_06993216.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|332878991|ref|ZP_08446704.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|254835755|gb|EET16064.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|298263259|gb|EFI06122.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|332683098|gb|EGJ55982.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 212 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +Y +L V+ G + ++ G R Q+ + + + K + +EL Sbjct: 1 MDKYYQILGKVLSSGKMQSNKKG-NIRYLLNEQLTLLPADLLDIFEGHTIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F+RG+ NV G++ WD + S+P Y + I I + R Sbjct: 60 LFMRGERNVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIERINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +I+ + A PC L QF ++ G+L YQRS D LG+P +I Sbjct: 110 N---SKNYILFLGSTGTESNQA--PCLSLVQFQIEQGELVMTAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L ++ I LG+VH+Y N+ ++ + L Sbjct: 165 LYL----ISRQIELPLKSITLNLGNVHIYENNIDKTEQLL 200 >gi|148378764|ref|YP_001253305.1| thymidylate synthase [Clostridium botulinum A str. ATCC 3502] gi|153931597|ref|YP_001383152.1| thymidylate synthase [Clostridium botulinum A str. ATCC 19397] gi|153935631|ref|YP_001386700.1| thymidylate synthase [Clostridium botulinum A str. Hall] gi|148288248|emb|CAL82322.1| putative phage-related deoxyuridylate hydroxymethyltransferase [Clostridium botulinum A str. ATCC 3502] gi|152927641|gb|ABS33141.1| thymidylate synthase [Clostridium botulinum A str. ATCC 19397] gi|152931545|gb|ABS37044.1| thymidylate synthase [Clostridium botulinum A str. Hall] Length = 324 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 11/244 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 Y+ L V G ++ Y M + + ++K + E LW+ Sbjct: 10 YIKNLNDVYYNPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIIFNFAEALWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ Y+ + ++ D G YG + S+ N I+Q + I++ + D Sbjct: 70 LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYG---YNKINQWNRIIKLFKED 126 Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P ++R + + N L K C FQF++ KL + R+ D + GI ++ S Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235 ++ + LA+ + G++ H + H+Y F+ A+ L + + P+M N Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSAKKELSFPRMPKKDN 246 Query: 236 IVDL 239 DL Sbjct: 247 WEDL 250 >gi|255690930|ref|ZP_05414605.1| thymidylate synthase [Bacteroides finegoldii DSM 17565] gi|260173138|ref|ZP_05759550.1| thymidylate synthase [Bacteroides sp. D2] gi|265750833|ref|ZP_06086896.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|298385881|ref|ZP_06995438.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|315921413|ref|ZP_07917653.1| conserved hypothetical protein [Bacteroides sp. D2] gi|319640489|ref|ZP_07995210.1| hypothetical protein HMPREF9011_00807 [Bacteroides sp. 3_1_40A] gi|260623265|gb|EEX46136.1| thymidylate synthase [Bacteroides finegoldii DSM 17565] gi|263237729|gb|EEZ23179.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|298261109|gb|EFI03976.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|313695288|gb|EFS32123.1| conserved hypothetical protein [Bacteroides sp. D2] gi|317387867|gb|EFV68725.1| hypothetical protein HMPREF9011_00807 [Bacteroides sp. 3_1_40A] Length = 214 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + ++ G + Q+ + + + K + EL Sbjct: 3 MNKYYRILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRSELQ 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ NV G++ WD + S+P Y + I+ I + R Sbjct: 62 LFMQGERNVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIAKINRERR 111 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D G+L YQRS D LG+P +I Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDIYH 166 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L +A I LG+VH+Y N+ + Sbjct: 167 LYL----MARQIELPLKSITLYLGNVHIYENNIPGTRALI 202 >gi|298386359|ref|ZP_06995915.1| thymidylate synthase [Bacteroides sp. 1_1_14] gi|298260736|gb|EFI03604.1| thymidylate synthase [Bacteroides sp. 1_1_14] Length = 214 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + ++ G + Q+ + + + K + EL Sbjct: 3 MNKYYRILDKILVAGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRSELQ 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ NV G++ WD + S+P Y + I+ I + R Sbjct: 62 LFMQGERNVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIAKINREKR 111 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D G+L YQRS D LG+P +I Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDIYH 166 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L +A I LG+VH+Y N+ + Sbjct: 167 LYL----MARQIELPLKSITLYLGNVHIYENNIPGTRALI 202 >gi|331028071|ref|YP_004421785.1| thymidylate synthase [Roseobacter phage RDJL Phi 1] gi|301341534|gb|ADK73418.1| thymidylate synthase [Roseobacter phage RDJL Phi 1] Length = 295 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 13/225 (5%) Query: 4 YLDLLRHVIKFGSDRRD-RTGVGTRSTFG-YQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60 Y LL ++ G + RT + G + + DL+ G P+ ++ + E Sbjct: 10 YRCLLGELMNHGVTETNERTRTQIKMLQGGHSFKLDLTSGRLPIAGNRRYYPHVAAAETA 69 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W G + +++ +W ++ +DGEL YG +WR + DQI V+ L Sbjct: 70 WQFMGTKDPAFIVSKAPKLWSKFV-EDGELKTAYGHRWR-----EAFGRDQIKLAVKELM 123 Query: 121 ADPYSRRHIVSAWNVALI----DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 +P +R+ +SAW+ + + PC F L ++ RS D F+G+P+ Sbjct: 124 DNPTNRQLFISAWDPSCDGLGGPQPKNIPCPVGFTVSRFRDDLHMSVFIRSSDAFVGLPY 183 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 ++ Y+L + + G + TL HLY H+ + L+ Sbjct: 184 DVMCYALTADAIGAEAGLRPASLHVTLAHPHLYEPHWLATEACLT 228 >gi|317505072|ref|ZP_07963018.1| thymidylate synthase [Prevotella salivae DSM 15606] gi|315663783|gb|EFV03504.1| thymidylate synthase [Prevotella salivae DSM 15606] Length = 212 Score = 121 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y L +++ G + ++ G R Q+ + + + + K + +EL Sbjct: 1 MNKYYQTLGKILERGKIQTNKKG-NIRYLLNEQLSLSPADLLDIFESHGIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD V S+P Y + I I + R Sbjct: 60 LFMQGERLVEKYREAGINWWDY----------CGSVLVNSYPTYFEKLPPLIVRINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D G+L YQRS D LG+P +I Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L +A I LG+VH+Y N+ E+ L L Sbjct: 165 LYL----MARQIDLPLKNITLNLGNVHIYENNLERTRLLL 200 >gi|21700315|gb|AAM75817.1|AF450274_1 bifunctional dihydrofolate reductase-thymidylate synthase [Tetrahymena sp.] Length = 311 Score = 121 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 53/113 (46%), Positives = 67/113 (59%), Gaps = 13/113 (11%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61 QYLDL++ V+ G R DRTG GT S FG MRFDLS G FPLLTTKK + + EL W Sbjct: 198 QYLDLVQRVVSTGVSRGDRTGTGTLSIFGAMMRFDLSSGAFPLLTTKKTFLRGIAEELFW 257 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP 102 FL+GD++ + L V IWD A + +G+LGP+YG QW + Sbjct: 258 FLKGDTSQTRLAAKDVHIWDANATRAFLDARGLPDRPEGDLGPVYGCQWSHFG 310 >gi|168183433|ref|ZP_02618097.1| thymidylate synthase [Clostridium botulinum Bf] gi|182673502|gb|EDT85463.1| thymidylate synthase [Clostridium botulinum Bf] Length = 324 Score = 121 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 11/244 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL L V G ++ Y M + + ++K + E LW+ Sbjct: 10 YLKNLNDVYYNPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ Y+ + ++ D G YG + S+ N I+Q IV+ + D Sbjct: 70 LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYG---YNKINQWHRIVELFKED 126 Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++R + + N L K C FQF++ KL + R+ D + GI ++ S Sbjct: 127 QDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIRKHKLYMTTFMRANDAYRGIISDVFS 186 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235 ++ + LA+ + G++ H + H+Y F+ A+ L + + P+M N Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246 Query: 236 IVDL 239 DL Sbjct: 247 WEDL 250 >gi|167577956|ref|ZP_02370830.1| deoxyuridylate hydroxymethyltransferase , putative [Burkholderia thailandensis TXDOH] Length = 329 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFD-LSKGFPLLTTKKVHWKSVVHELLWF 62 YL L V R G R GY R D F +K + E LW+ Sbjct: 11 YLATLSDVCGAYEFRSAPRGHAEREIIGYGARIDDPRARFCRRAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + +DQI + L R Sbjct: 71 LSGRNDLEFIEHYAPSMARYSPDGKHLPGTGYGARLMHYG---ARALDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEDLYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYVGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L +A+ +G + G + H +G +H+Y+++ +A L Sbjct: 188 SFTFLQEYVATRLGCEIGAYSHHVGSIHVYDDNLPRALALL 228 >gi|311896637|dbj|BAJ29045.1| putative methyltransferase [Kitasatospora setae KM-6054] Length = 322 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 11/205 (5%) Query: 11 VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLL--TTKKVHWKSVVHELLWFLRGDSN 68 ++ G R G+ T G ++ + + ++ E +W L G S Sbjct: 20 ILSQGRSVAPR-GMATAELMGAYLKLTNPAARMVHLGPYRVLNPAFAAAETVWILSGSS- 77 Query: 69 VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128 ++H + G L YG + R W +DQ+ + + L D SRR Sbjct: 78 ADWIHDFNSRL--AGLTDHGALQGAYGPRLRRWH----GQLDQLDYVRRQLTRDNESRRA 131 Query: 129 IVSAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 +V ++ PC ++FY+ G+L RS DV+LG+P+++ + ++L + Sbjct: 132 VVQIFDPGRDTAGHKDVPCTLGYRFYLREGRLEMHTSMRSQDVWLGLPYDLITTTVLHEL 191 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNH 212 +A +G + G++ H + +HLY H Sbjct: 192 MAGWLGAEVGDYHHHVDSLHLYAQH 216 >gi|237708114|ref|ZP_04538595.1| predicted protein [Bacteroides sp. 9_1_42FAA] gi|301309963|ref|ZP_07215902.1| thymidylate synthase [Bacteroides sp. 20_3] gi|229457942|gb|EEO63663.1| predicted protein [Bacteroides sp. 9_1_42FAA] gi|300831537|gb|EFK62168.1| thymidylate synthase [Bacteroides sp. 20_3] Length = 212 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 20/224 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L+ V+ G ++ R G +R + ++ + + K + EL Sbjct: 1 MNKYYQILKKVLADGKTQKGRKGE-SRYLLNETVTLSPAELLDIFEGHNIARKKLRSELS 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F+ G+ V G++ WD + S+P Y + I I + R Sbjct: 60 LFMSGERQVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIGKINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + S+ +++ + A PC L QF ++ G+L YQRS D LG+P +I Sbjct: 110 S---SKNYVLFLGSTGTESNQA--PCLSLVQFQIEQGELVLTAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224 L ++ I LG+VH+Y N+ + L+ +P Sbjct: 165 LYL----ISRQIELPLKSITINLGNVHIYENNVTRTQELLAGNP 204 >gi|254884961|ref|ZP_05257671.1| predicted protein [Bacteroides sp. 4_3_47FAA] gi|254837754|gb|EET18063.1| predicted protein [Bacteroides sp. 4_3_47FAA] Length = 214 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + +R G + + + + + K + +EL Sbjct: 3 MNKYYQVLDKILATGKTQSNRKG-NIQYLLNEVLVLTPADLLDIFEGHHIARKKLRNELH 61 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD + S+P Y + I I + R Sbjct: 62 LFMQGERQVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIDKINREKR 111 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ + PC L QF +DNG+L YQRS D LG+P +I Sbjct: 112 N---SKNYVLFLGETGVESNQT--PCLSLVQFQIDNGELVLSAYQRSSDANLGLPADIYH 166 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L +A I LG+VH+Y N+ L Sbjct: 167 LYL----MARQIELPLKSITLYLGNVHIYENNIPGTRALL 202 >gi|255019274|ref|ZP_05291400.1| thymidylate synthase [Listeria monocytogenes FSL F2-515] Length = 78 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 47/78 (60%), Positives = 62/78 (79%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL Sbjct: 1 MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60 Query: 61 WFLRGDSNVSYLHRHGVS 78 WFL GD+N+ YL +H + Sbjct: 61 WFLHGDTNIRYLLQHNNN 78 >gi|288927902|ref|ZP_06421749.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108] gi|288330736|gb|EFC69320.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108] Length = 215 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y LL +++ G ++ ++ G T Q+ + + ++ + + + +EL Sbjct: 4 MNKYYSLLDNILSDGHNQTNKKGNITY-LLNQQLTLTPADLLDIFESRSIARRKLRNELD 62 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ +V+ + G++ WD + S+P Y + I+ I + R Sbjct: 63 LFMQGERDVAKYRKAGITWWDY----------CGSILVNSYPTYFEKLPALIARINREKR 112 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + + + PC L QF +D+G+L YQRS D LG+P +I Sbjct: 113 TSKN-----YVLFLGSTDAESNQAPCLSLVQFQIDDGQLVISAYQRSSDANLGLPSDIYH 167 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L ++ I LG+VH+Y N+ + L Sbjct: 168 LYL----MSRQIELPLKSITLFLGNVHVYENNIGRTRALL 203 >gi|83718309|ref|YP_439499.1| deoxyuridylate hydroxymethyltransferase [Burkholderia thailandensis E264] gi|257142625|ref|ZP_05590887.1| deoxyuridylate hydroxymethyltransferase, putative [Burkholderia thailandensis E264] gi|83652134|gb|ABC36198.1| deoxyuridylate hydroxymethyltransferase , putative [Burkholderia thailandensis E264] Length = 329 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 7/221 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFD-LSKGFPLLTTKKVHWKSVVHELLWF 62 YL L V R G R GY R D F +K + E LW+ Sbjct: 11 YLATLSDVCGAYEFRSAPRGHAEREIIGYGARIDDPRARFCRRAARKQNVVFNYAEALWY 70 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121 L G +++ ++ + S+ D G YG + + +DQI + L R Sbjct: 71 LSGRNDLEFIEHYAPSMARYSPDGKHLPGTGYGARLMHYG---ARALDQIERALDILSRD 127 Query: 122 DPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D S+R ++ ++ + C Q + G+L + R+ D ++G+ ++ Sbjct: 128 DAESKRVVLQIFSADEDLYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYVGLLNDVF 187 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 S++ L +A+ + + G + H +G +H+Y+++ +A L Sbjct: 188 SFTFLQEYVATRLDCEIGAYSHHVGSIHVYDDNLPRALALL 228 >gi|325271010|ref|ZP_08137596.1| thymidylate synthase [Prevotella multiformis DSM 16608] gi|324986656|gb|EGC18653.1| thymidylate synthase [Prevotella multiformis DSM 16608] Length = 212 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y D+L +++ G + ++ G + Q+ + + + + K + +EL Sbjct: 1 MNKYHDILEKIMRTGKMQHNKKG-NIKCLLNEQLSLSPADLLDIFESHDIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD V S+P Y + I+ I + R Sbjct: 60 LFMQGERQVEKYREAGINWWDY----------CGSVLVNSYPTYFEQLPPLIAKINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +I+ A PC L QF +D G L YQRS D LG+P +I Sbjct: 110 N---SKNYILFLGETNAESNQA--PCLSLVQFQIDEGVLVLSAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L ++ I L +VH+Y ++ E+ L Sbjct: 165 LYL----MSRQIDLPLKSITLNLANVHIYESNLERTKELL 200 >gi|237794066|ref|YP_002861618.1| thymidylate synthase [Clostridium botulinum Ba4 str. 657] gi|229262626|gb|ACQ53659.1| thymidylate synthase [Clostridium botulinum Ba4 str. 657] Length = 324 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 11/244 (4%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 YL L V G ++ Y M + + ++K + E LW+ Sbjct: 10 YLKNLNDVYYTPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ Y+ + ++ D G YG + S+ + +Q IV+ + D Sbjct: 70 LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYGHNN---TNQWHRIVELFKED 126 Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++R + + N L K C FQF++ KL + R+ D + GI ++ S Sbjct: 127 QDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235 ++ + LA+ + G++ H + H+Y F+ A+ L + + P+M N Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246 Query: 236 IVDL 239 DL Sbjct: 247 WEDL 250 >gi|189463012|ref|ZP_03011797.1| hypothetical protein BACCOP_03714 [Bacteroides coprocola DSM 17136] gi|260642224|ref|ZP_05414962.2| thymidylate synthase [Bacteroides finegoldii DSM 17565] gi|189430294|gb|EDU99278.1| hypothetical protein BACCOP_03714 [Bacteroides coprocola DSM 17136] gi|260623201|gb|EEX46072.1| thymidylate synthase [Bacteroides finegoldii DSM 17565] Length = 233 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 20/221 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y L +++ G + +R G + ++ + + + + K + EL Sbjct: 22 MNKYYQTLDKILQTGKIQTNRKG-RIKYLLNERLMLTPADLLDIFESHGIARKKLKEELK 80 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G +V G++ WD S+P Y + I+ I + R Sbjct: 81 LFMQGVRDVEKYKEAGITWWDY----------CGHTLVNSYPTYFEKLPPLITRINREKR 130 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ + A PC L QF +D G+L YQRS D LG+P +I Sbjct: 131 N---SKNYVLFLGETGVESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADIYH 185 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 L +A + LG+VH+Y N+ ++ LS Sbjct: 186 LYL----MARQVELPLKSITLDLGNVHIYENNIDRTLELLS 222 >gi|167645964|ref|YP_001683627.1| thymidylate synthase [Caulobacter sp. K31] gi|167348394|gb|ABZ71129.1| thymidylate synthase [Caulobacter sp. K31] Length = 367 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 14/214 (6%) Query: 22 TGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81 T T G + + K H S + E +W++ + + + + +S + Sbjct: 29 TKGTTVEEHGVVLELTRPRARLSRAHMKGHVFSCIGEFIWYISCSNRLEPV-EYYISRYK 87 Query: 82 EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-IDK 140 ++A+KDG + YG P G Q + + L P +R+ ++ ++ + Sbjct: 88 KFAEKDGTVWGAYG------PRIFGGDRSQYEVVKEMLSERPSTRKAVIQLFDREDVLQD 141 Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200 PC C QF V +G L+ ++ RS DV++G+P +I +++++ +LA +GF+ G + Sbjct: 142 YNDIPCTCTMQFLVRDGMLNLVVHMRSNDVYMGLPHDIFAFTMIQEILAHDLGFKLGTYK 201 Query: 201 HTLGDVHLYNNHFEQADL------QLSRSPRTLP 228 H +G HLY++ E+ + Q +R +P Sbjct: 202 HMVGSFHLYDHDREKVEQYLKEGFQPTREMPAMP 235 >gi|198276501|ref|ZP_03209032.1| hypothetical protein BACPLE_02696 [Bacteroides plebeius DSM 17135] gi|237710406|ref|ZP_04540887.1| predicted protein [Bacteroides sp. 9_1_42FAA] gi|198270589|gb|EDY94859.1| hypothetical protein BACPLE_02696 [Bacteroides plebeius DSM 17135] gi|229455868|gb|EEO61589.1| predicted protein [Bacteroides sp. 9_1_42FAA] Length = 212 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 20/221 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y L +++ G + +R G + ++ + + + + K + EL Sbjct: 1 MNKYYQTLDKILQTGKIQTNRKG-RIKYLLNERLMLTPADLLDIFESHGIARKKLKEELK 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G +V G++ WD S+P Y + I+ I + R Sbjct: 60 LFMQGVRDVEKYKEAGITWWDY----------CGHTLVNSYPTYFEKLPPLITRINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ + A PC L QF +D G+L YQRS D LG+P +I Sbjct: 110 N---SKNYVLFLGETGVESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 L +A + LG+VH+Y N+ ++ LS Sbjct: 165 LYL----MARQVELPLKSITLDLGNVHIYENNIDRTLELLS 201 >gi|414442|gb|AAC43192.1| Homologous to Swiss-Prot Accession Number P13954, thymidylate synthetase [Mycoplasma genitalium] Length = 95 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%) Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228 D+FLG+PFNIASY+LL ++A + G FIHTLGD H+Y NH EQ LQL+R+ P Sbjct: 1 DIFLGVPFNIASYALLVYLVAHETKLKPGYFIHTLGDAHIYENHIEQIKLQLTRTTLDPP 60 Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 Q+++ + + ++ ++D L Y H I +V+V Sbjct: 61 QVVLKSD-KSIFAYSFDDIELVGYNYHPFIYGRVAV 95 >gi|261880956|ref|ZP_06007383.1| thymidylate synthase [Prevotella bergensis DSM 17361] gi|270332260|gb|EFA43046.1| thymidylate synthase [Prevotella bergensis DSM 17361] Length = 212 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 20/220 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y D+L +++ G + ++ G + Q+ + + + + K + +EL Sbjct: 1 MNKYHDILEKIMRTGKMQHNKKG-NIKYCLNEQLTLTPADLLDIFESHGIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD V S+P Y + I+ I R Sbjct: 60 LFMQGERQVEKYREAGINWWDY----------CGSVLVNSYPTYFEKLPPLIAKINNEKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ A PC L QF +D G+L YQRS D LG+P +I Sbjct: 110 N---SKNYVLFLGETNAESNQA--PCLSLVQFQIDEGELVISAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L ++ I L +VH+Y ++ E+ L Sbjct: 165 LYL----MSRQIELPLKSITLNLANVHIYESNLERTQELL 200 >gi|322511194|gb|ADX06507.1| putative bifunctional dihydrofolate reductase-thymidylate synthase [Organic Lake phycodnavirus 2] Length = 115 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 42/113 (37%), Positives = 70/113 (61%) Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 QF+V KLSC LYQRSGD+ LG+PFNI SYS LT ++A + EFI+ +G+ H+Y Sbjct: 1 MQFHVVENKLSCSLYQRSGDLGLGVPFNILSYSALTHLIAHHCHLEASEFIYHIGNAHVY 60 Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262 ++H + +Q+ + P ++ IN + ++ + DF + +Y+ H ++ K+ Sbjct: 61 DDHLDALLVQVEKEPYEFSKVTINNHYDNISDYGINDFDITNYKSHDSVSLKM 113 >gi|224165617|ref|XP_002338837.1| predicted protein [Populus trichocarpa] gi|222873586|gb|EEF10717.1| predicted protein [Populus trichocarpa] Length = 82 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 45/82 (54%) Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242 LLT ++A V G+F+H +GD H+Y+ H QL + P+ P + IN D+ +F Sbjct: 1 LLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQEQLRKLPKPFPILKINSEKKDIDTF 60 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 DF L Y+PH I K++V Sbjct: 61 VAADFKLIGYDPHQKIEMKMAV 82 >gi|260575990|ref|ZP_05843984.1| thymidylate synthase [Rhodobacter sp. SW2] gi|259021689|gb|EEW24991.1| thymidylate synthase [Rhodobacter sp. SW2] Length = 358 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 6/212 (2%) Query: 6 DLLRHVIKF-----GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 DL+R V K G+ D + + FG + + + K S + EL Sbjct: 11 DLMRVVFKQLLTGRGNFVVDSSKGKSTEVFGALLELKNPRARLSRSFSKAKAFSPLGELF 70 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 W+L G V ++ + + D+ G + + + ++++LR Sbjct: 71 WYLSGSDRVEFIKHYIPNYPKLIKDEVTANGAYGPRIFGKEALAKRDGASEWDRVIRTLR 130 Query: 121 ADPYSRRHIVSAWNVALI-DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 SR +V ++ + K PC C QF + NG+L + RS D F G+P ++ Sbjct: 131 EREGSRNALVQIYDNSDAKPKNGDKPCTCTIQFAIRNGQLLMHTHMRSNDAFFGLPHDVF 190 Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 ++++L + A +G G + H++ +HLY++ Sbjct: 191 TFTMLQEIAARELGLGLGRYSHSVTSLHLYHD 222 >gi|206973310|ref|ZP_03234232.1| thymidylate synthase [Bacillus cereus AH1134] gi|206732194|gb|EDZ49394.1| thymidylate synthase [Bacillus cereus AH1134] Length = 326 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 26/263 (9%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK--GFPLLTTKKVHWKSVVHELLW 61 YL+LL I + D + P+L + ++ + E W Sbjct: 13 YLNLLVEAITKKVNITDSRNGPVKDLGPAYFEITNEDLLRVPILQERALNPFFALTEFSW 72 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 + G + ++ L+ ++ +D ++D L YG + R +DQ+ ++ L+ Sbjct: 73 IITGSNRLTPLNNF-INDFDRFSDDGFTLNGAYGHRLRELH-----GLDQLEKSIRILQE 126 Query: 122 DPYSRRHIVSAWNVALIDKMA-LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + +RR +++ W++ + + PC+ + N L + RS D+FLG+P+N+ Sbjct: 127 EKSTRRVVLTMWHIDDLGSNSRDIPCNISIMLKIRNNLLDMTVINRSNDLFLGVPYNVVV 186 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240 + LL +A IG + G H +HLY+ HFE+ Q II N ++ + Sbjct: 187 FYLLQCYIAKKIGCKVGVQRHFTDSLHLYSQHFEKV------------QSIIQNNNLERI 234 Query: 241 SFRYEDFT---LRSY--EPHAAI 258 + YE F L +Y E H I Sbjct: 235 KYMYEKFEKIDLSTYIDENHRYI 257 >gi|167837403|ref|ZP_02464286.1| thymidylate synthase [Burkholderia thailandensis MSMB43] Length = 124 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 12/117 (10%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M QYLDL+R ++ G+ + +RTG+ T G +RFDL +GFP +TTKK+ +KS + EL+ Sbjct: 1 MKQYLDLVRTILDTGAWKSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD 105 FLR + + G +WD A+++ +LG +YGVQWR WP Y Sbjct: 61 GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYK 117 >gi|238798208|ref|ZP_04641694.1| Deoxyuridylate hydroxymethyltransferase [Yersinia mollaretii ATCC 43969] gi|238717945|gb|EEQ09775.1| Deoxyuridylate hydroxymethyltransferase [Yersinia mollaretii ATCC 43969] Length = 335 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 8/201 (3%) Query: 37 DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGV 96 + + F ++ +K + + + E +W L G ++ +L H + E++D + YG Sbjct: 20 NPRERFLVIPERKNNVFAQLAETIWVLAGRGDLEFLQ-HYLPRSIEFSDDNKTWRAAYGP 78 Query: 97 QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALIDKMALPPCHCLFQFYVD 155 + R+W DQ+S ++ L+ DP ++R ++S ++ + PC+ QF Sbjct: 79 RLRNWM----GKTDQVSCVISRLQEDPNTKRAVMSLFDPMSDYSDTKDVPCNNWLQFIQR 134 Query: 156 NGKLSCQLYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214 + L + R+ D G N +S+L ++A+ +G+Q G +G H+Y+ H+ Sbjct: 135 DNILYLHVTVRANDAIWGFSGINFFEWSVLHEIVATTLGYQVGTLSWYVGTFHIYSRHYN 194 Query: 215 QADLQLS-RSPRTLPQMIINP 234 + L ++P++ + I P Sbjct: 195 TSRDLLRIKNPKSPYECGIEP 215 >gi|224535318|ref|ZP_03675857.1| hypothetical protein BACCELL_00179 [Bacteroides cellulosilyticus DSM 14838] gi|224523044|gb|EEF92149.1| hypothetical protein BACCELL_00179 [Bacteroides cellulosilyticus DSM 14838] Length = 212 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 90/223 (40%), Gaps = 20/223 (8%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++ G + ++ G R Q+ + + + K + +EL Sbjct: 1 MNKYYMILEKILVLGKMQDNKKG-NIRCLLNEQLVLTPADLLDIFEGHSIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F++G+ V G++ WD + S+P Y + I+ I + R Sbjct: 60 LFMQGERCVEKYREAGINWWDY----------CGAILVNSYPSYFEKLPPLIAKINREKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ + A PC L QF +D +L YQRS D LG+P +I Sbjct: 110 N---SKNYVLHLGATGVESNQA--PCLSLVQFQIDESELVISAYQRSSDANLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 L ++ I LG+VH+Y N+ E+ +S Sbjct: 165 LYL----MSRQIELPLKSITLNLGNVHIYENNIEKTRSLISGE 203 >gi|325298325|ref|YP_004258242.1| thymidylate synthase [Bacteroides salanitronis DSM 18170] gi|324317878|gb|ADY35769.1| thymidylate synthase [Bacteroides salanitronis DSM 18170] Length = 215 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 20/222 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 ++Y +L ++ G + +R G R ++ + + + K + EL Sbjct: 5 NKYHCILEKIVCSGKTQTNRKG-NIRYLLNERLDLTPADLLEIFEGHNLARKKLKSELEL 63 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121 F RG+ NV G++ WD S+P Y + I I + R Sbjct: 64 FTRGERNVDRYREAGITWWDY----------CGKTLVNSYPTYLERLPPLIDRINREKRN 113 Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181 S+ +++ + A PC L QF +++G+L YQRS D LG+P +I Sbjct: 114 ---SKNYVLFLGETGVESNQA--PCLSLVQFQIEDGELVISAYQRSSDANLGLPADIYH- 167 Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 +A I T G+VH+Y N+ E LS Sbjct: 168 ---LYSIARQIELPLKSITLTFGNVHVYENNIENTYRLLSGE 206 >gi|94496508|ref|ZP_01303085.1| Thymidylate synthase [Sphingomonas sp. SKA58] gi|94424254|gb|EAT09278.1| Thymidylate synthase [Sphingomonas sp. SKA58] Length = 78 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 41/78 (52%) Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246 MLA + GE I GDVHLY NH + QLSR P+ P + IN + +R ED Sbjct: 1 MLAQQCDLEPGEVIWQGGDVHLYLNHAPLVEEQLSRIPQGAPTLRINRQPSSIFDYRIED 60 Query: 247 FTLRSYEPHAAILAKVSV 264 F + Y P A I A V+V Sbjct: 61 FEVLDYSPQAHIAAPVAV 78 >gi|146737945|gb|ABQ42561.1| thymidylate synthase [Peanut witches'-broom phytoplasma] Length = 88 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/86 (53%), Positives = 70/86 (81%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M +YL+L R ++K+G+ R +RT V T+S FGY MRF+L++GFPLLTTKK+++ V+HELL Sbjct: 1 MEKYLNLCRTILKYGNIRENRTKVLTKSIFGYHMRFNLTQGFPLLTTKKINFNLVIHELL 60 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK 86 WF++GD+N+ YL ++ V+IW+EW + Sbjct: 61 WFIKGDTNIRYLVQNKVNIWNEWPYE 86 >gi|305664003|ref|YP_003860291.1| thymidylate synthase [Ignisphaera aggregans DSM 17230] gi|304378572|gb|ADM28411.1| thymidylate synthase [Ignisphaera aggregans DSM 17230] Length = 241 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 3/140 (2%) Query: 79 IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138 I D +K G Y + ++ DG +++QI IV+ LR PY+RR W Sbjct: 79 IHDYLVEK---FGYTYHERLFAYRLPDGRIVNQIEKIVEKLRKTPYTRRAQAITWQPWKD 135 Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198 + PPC F V +GKL ++ RS D F N+ +++ L +A+ +G + G Sbjct: 136 LETEHPPCLQRIWFRVIDGKLVMHIHMRSNDAFKAAFMNMYAFTELQRFVANELGVEPGR 195 Query: 199 FIHTLGDVHLYNNHFEQADL 218 +IH H+Y ++ + Sbjct: 196 YIHIADSYHVYERDWKWFEK 215 >gi|325953737|ref|YP_004237397.1| thymidylate synthase [Weeksella virosa DSM 16922] gi|323436355|gb|ADX66819.1| thymidylate synthase [Weeksella virosa DSM 16922] Length = 211 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 20/221 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L +IK G + ++ G T ++ + + + + EL Sbjct: 1 MNKYHIILDKIIKKGKVQSNKKGNITY-LLNQKLELKPTDLLEIFEEHGIARNKLKTELE 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 F +G+ +G+ WD + S+P Y + D I I + R Sbjct: 60 LFTKGERLTERYRENGIEWWDY----------CGPILVNSYPTYFEQLPDLIKKINKEKR 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S+ +++ + PC L QF ++ GKL YQRS D LG+P +I Sbjct: 110 N---SKNYVLFLGRTDVESNQQ--PCLSLVQFQIEKGKLIISAYQRSSDASLGLPADIYH 164 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 L ++ I L +VH+Y N+ E L Sbjct: 165 LYL----ISRQINLPLKSITLMLANVHIYENNVEPTKSLLQ 201 >gi|330507653|ref|YP_004384081.1| thymidylate synthase, methanogen type [Methanosaeta concilii GP-6] gi|328928461|gb|AEB68263.1| thymidylate synthase, methanogen type [Methanosaeta concilii GP-6] Length = 245 Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 73/213 (34%), Gaps = 20/213 (9%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 L + + G + D G R Q+ + + + + E W Sbjct: 47 LNLIWRQGEEISDERGTKIRELLSLQVVVENP-----------YQEMIPEEYSW------ 89 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N L + + YG + R+W +DQI +Q L+ P +RR Sbjct: 90 NEERLEEYA---HQLLCGDNPGFEYTYGERLRAWRLPGTPPLDQIDMAIQRLKESPATRR 146 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 W + + PC + F + G+L ++ RS D P N+ + L Sbjct: 147 ATSVTWIPPVDGERNEVPCMIVDDFKLRGGRLHLAIFFRSHDFAGAYPANLYGLARLLEY 206 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 A +G Q G T H+Y + ++ + L Sbjct: 207 AAREVGAQPGSISTTSSSAHIYEHDWDWIEEML 239 >gi|169634660|ref|YP_001708396.1| putative thymidylate synthase [Acinetobacter baumannii SDF] gi|87299249|emb|CAJ77006.1| Thymidylate synthase [Acinetobacter baumannii] gi|169153452|emb|CAP02595.1| putative Thymidylate synthase [Acinetobacter baumannii] Length = 222 Score = 111 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 87/207 (42%), Gaps = 12/207 (5%) Query: 11 VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70 +++ G G + + + ++ + S + E W+L G ++ Sbjct: 19 ILENGDHITASKGEN-FEVRNAVLTLENPRSRLSISETRSKLISCIGEFFWYLNGSDSLE 77 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 ++ + I D + ++ P G +Q + I++ L+ P SRR ++ Sbjct: 78 FIEYY---ISDYRKYIEYQIDENKPALGAYGPRIFGAQ-NQFNKIIEVLKDKPTSRRAVI 133 Query: 131 SAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM-- 186 S ++ + + PC CL QF++ N +L RS D +G+ +I S++L+ Sbjct: 134 SIYSKDDLLREDSRDIPCTCLLQFFIRNERLHLTATMRSNDAAIGLVHDIFSFTLIQELL 193 Query: 187 ---MLASVIGFQYGEFIHTLGDVHLYN 210 ++ + Q GE+ H +G +H+Y Sbjct: 194 LAKLIRYIPNLQLGEYTHIVGSLHIYK 220 >gi|240276635|gb|EER40146.1| thymidylate synthase [Ajellomyces capsulatus H143] Length = 209 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 49/124 (39%), Positives = 65/124 (52%), Gaps = 27/124 (21%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46 HQYL L+R +++ G R DRTG GTRS F Q+RF LSK PLLT Sbjct: 47 HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106 Query: 47 TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94 TK+V ++V+ ELLWF+ G ++ L GV IWD ++ G+LGP+Y Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166 Query: 95 GVQW 98 G Sbjct: 167 GFHG 170 >gi|124484937|ref|YP_001029553.1| hypothetical protein Mlab_0109 [Methanocorpusculum labreanum Z] gi|124362478|gb|ABN06286.1| thymidylate synthase [Methanocorpusculum labreanum Z] Length = 239 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 21/205 (10%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW--FLRG 65 +R++++ GS G T T + D P+++ +K E + G Sbjct: 17 IRYILEKGSLLTTENGEETVETDEVCLFVDTPLAKPMVSP-CSRFKEAFLEAYARNLIDG 75 Query: 66 DSNVSYLHRHGVSI-WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124 +V HG W ++GE+ DQI I+ LR P Sbjct: 76 SDSVFEYDYHGRLFDWGCGLTQNGEIHQ-----------------DQIQYIIDKLRECPV 118 Query: 125 SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 SRR + W + K+A PC L Q V +GKL+ ++ RS D+ N+ + + L Sbjct: 119 SRRAVAVTWCPPVDAKLADCPCLQLVQCVVRDGKLNMKIVFRSNDMLSAAGSNMFALAKL 178 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLY 209 +A IG + G + H H+Y Sbjct: 179 QEYIAEKIGVEVGTYTHISLVPHVY 203 >gi|115299484|gb|ABI93712.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] Length = 95 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 50/95 (52%), Positives = 64/95 (67%), Gaps = 8/95 (8%) Query: 92 PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN + + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDCQSDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 PPCH + QF+V NGKLSC +YQRS D LGIPFNI Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95 >gi|115299502|gb|ABI93721.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] gi|115299510|gb|ABI93725.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] Length = 96 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 8/96 (8%) Query: 89 ELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 +L P+YG QWR + DY+ +DQ+ ++Q L+ +P SRR I+SAWN + + + Sbjct: 1 DLDPVYGFQWRHFGAEYKDCQSDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQ 60 Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 MALPPCH + QF+V NGKLSC +YQRS D LGIPF Sbjct: 61 MALPPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPF 96 >gi|115299486|gb|ABI93713.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] gi|115299492|gb|ABI93716.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] Length = 95 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 50/95 (52%), Positives = 64/95 (67%), Gaps = 8/95 (8%) Query: 92 PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN + + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 PPCH + QF+V NGKLSC +YQRS D LGIPFNI Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95 >gi|115299512|gb|ABI93726.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia] Length = 93 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 8/93 (8%) Query: 92 PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY+ +DQ+ ++Q L+ +P SRR I+SAWN + +++MAL Sbjct: 1 PVYGYQWRHFGAEYKDCQSDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLEQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 PPCH + QF+V NGKLSC +YQRS D+ LGIPF Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQRSCDLGLGIPF 93 >gi|73668429|ref|YP_304444.1| thymidylate synthase [Methanosarcina barkeri str. Fusaro] gi|121725683|sp|Q46E28|TYSY_METBF RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|72395591|gb|AAZ69864.1| thymidylate synthase [Methanosarcina barkeri str. Fusaro] Length = 217 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 12/164 (7%) Query: 54 SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113 + HE W N L + + + + YG + R+W +DQI Sbjct: 59 RIPHETAW------NEERLEEYAKQL--ISGENTQDFEYTYGQRLRNWH----GKVDQID 106 Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173 +++ L+ +P SRR I W + K+ PC L F + +GK+ RS D Sbjct: 107 YVIEKLQQNPTSRRAIAVTWIPPVDTKVNEVPCMMLDDFKIRDGKIHLTTLFRSHDFGGA 166 Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 P N+ S L +A +G + G H+Y++ ++ + Sbjct: 167 YPANLYGLSKLLEYVADKVGTKPGTITTISISAHIYDHDWDMVE 210 >gi|115299488|gb|ABI93714.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] Length = 95 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 8/95 (8%) Query: 92 PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 PPCH + QF+V NGKLSC +YQRS D LGIPFNI Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95 >gi|330899059|gb|EGH30478.1| thymidylate synthase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 113 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 11/104 (10%) Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231 +G PFN+ + L ++ + G+ F + +GD H+Y NH + + Q++R P +P+++ Sbjct: 10 IGTPFNLTEGAALLSLIGRLTGYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLV 69 Query: 232 INPNIVDLLS-----------FRYEDFTLRSYEPHAAILAKVSV 264 I+ + + DFTL Y+ H A+ A ++V Sbjct: 70 ISDRVPEFAKTGVYQPEWLELIEPSDFTLEGYQHHPAMTAPMAV 113 >gi|116754022|ref|YP_843140.1| thymidylate synthase [Methanosaeta thermophila PT] gi|116665473|gb|ABK14500.1| Thymidylate synthase [Methanosaeta thermophila PT] Length = 215 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 4/135 (2%) Query: 86 KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 ++ YG + RSW +DQI+ IV L+ +P +RR W + K P Sbjct: 79 ENPGFEYTYGERLRSWN----GEVDQIAEIVNRLKRNPRTRRATAVTWIPQVDHKREEVP 134 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 C + F + + +L+ + RS D P N+ + S L ++ G G Sbjct: 135 CMVVCDFKIRSSRLNLTVMFRSHDFAGAYPANVYALSKLLHHVSRESGSVPGSLTTLSAS 194 Query: 206 VHLYNNHFEQADLQL 220 H+Y + ++ + + Sbjct: 195 AHIYEHDWDWVEGLI 209 >gi|115299490|gb|ABI93715.1| dihydrofolate reductase-thymidylate synthase [Paramecium tetraurelia] Length = 95 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 8/95 (8%) Query: 92 PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDRQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 PPCH + QF+V NGKLSC +YQRS D LGIPFNI Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95 >gi|304314929|ref|YP_003850076.1| thymidylate synthase [Methanothermobacter marburgensis str. Marburg] gi|1717846|sp|P80305|TYSY_METTM RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|2127679|pir||S62192 probable thymidylate synthase (EC 2.1.1.45) - Methanobacterium thermoautotrophicum (strain Marburg) gi|1103708|emb|CAA63063.1| deoxyuridylate hydroxymethylase (TysY) [Methanothermobacter thermautotrophicus] gi|302588388|gb|ADL58763.1| thymidylate synthase [Methanothermobacter marburgensis str. Marburg] Length = 223 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 77/224 (34%), Gaps = 24/224 (10%) Query: 5 LDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-------PLLTTKKVHWKSVVH 57 L L+ ++ G + RD G TR + G P + + Sbjct: 15 LKLVEKIMSDGREIRDERGSLTREVMNTVVTIKNPLGRSGDFYHLPARSLINIRVPEGY- 73 Query: 58 ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 F G+ + + E D G +Y R + +DQ+ ++ Sbjct: 74 ----FWSGE---------KLEKYSEQFLSDDRKGFVYTYGNRLRAHF---GVDQVDRAIE 117 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 L+ SRR + W+ + + PC L F V G+L RS D++ N Sbjct: 118 RLKNCKESRRATMVTWDPKIDTESDEVPCMILVDFKVREGRLFTTALWRSHDIYGAWFPN 177 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 + L +AS +G + G H+Y +F++A + Sbjct: 178 AVGLAYLADHVASEVGVEVGHITIHSISAHIYEVNFKEAKEVIK 221 >gi|37651515|ref|NP_932389.1| dCMP hydroxymethylase [Aeromonas phage 44RR2.8t] gi|34732815|gb|AAQ81353.1| dCMP hydroxymethylase [Aeromonas phage 44RR2.8t] Length = 231 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 24/227 (10%) Query: 8 LRHVIKF----GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 +R ++ G D+TGV T + D F L + EL W+L Sbjct: 9 IRDILAQRFAAGEFVTDKTGVKTIEIAPVMFKADEPLIFGKLNNDYIE-----RELAWYL 63 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 V + IW+ +D +G + YG W D +G+ Q ++++ L +DP Sbjct: 64 SQSRYVHDIPGKTPVIWEAVSDSEGRINSNYG--WAILSDENGS---QFANVLMHLASDP 118 Query: 124 YSRRHIVSAWNVALIDK-----MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 +RR + + + M+ C Q+ + +GKL+ ++ RS D G + Sbjct: 119 NTRRANMIYTRPTMHEDYKANGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDW 178 Query: 179 A-----SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 A L+ + + + + G+ + +H+Y HF + + Sbjct: 179 AWQDYVLKRLVDKLQSREVMVEKGDIYWCVDSIHVYERHFPMIEKYI 225 >gi|207742054|ref|YP_002258446.1| thymidylate synthase protein [Ralstonia solanacearum IPO1609] gi|206593440|emb|CAQ60367.1| putative thymidylate synthase protein [Ralstonia solanacearum IPO1609] Length = 283 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 85/159 (53%), Gaps = 11/159 (6%) Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 + G + +S++ + +S +DE++D + YG + ++ ++Q+S++++ L + Sbjct: 1 MAGSNELSFIQ-YYISRYDEFSDDGNTVHGAYGPRL-----FNMRGVNQVSNVIEKLSGN 54 Query: 123 PYSRRHIVSAWNVALID-----KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 +RR ++ +N + PC C QF + +L + RS D +LG+P + Sbjct: 55 NDTRRAVIQLFNAEDLGCDVAVGRKDIPCTCTMQFSLRARQLHMFVTMRSNDAYLGLPHD 114 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 I ++++L ++A +G + G + H +G +HLY+ + +QA Sbjct: 115 IFAFTMLQEIVARAVGAELGTYKHAVGSLHLYSKNTDQA 153 >gi|220906251|ref|YP_002481562.1| thymidylate synthase [Cyanothece sp. PCC 7425] gi|219862862|gb|ACL43201.1| thymidylate synthase [Cyanothece sp. PCC 7425] Length = 508 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 13/180 (7%) Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 ++ + I ++ ++G + YG + RSW DQI +++ L D S R ++ Sbjct: 248 FIRDYIAHILEDATVQEG-VKYTYGQRLRSWFGR-----DQIQQVIEKLSEDLDSARAVM 301 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 S W+VA + A PPC + G+LS RS D+F P N L L Sbjct: 302 SLWDVADHEAQASPPCLNHLWVRIVEGELSLTATFRSNDMFSAWPANAMGLRALQQHLRD 361 Query: 191 VIG------FQYGEFIHTLGDVHLYNNHFEQADLQL-SRSPRTLPQMIINPNIVDLLSFR 243 I G I H+Y++ +E AD L ++ P P+ +P L+S Sbjct: 362 RISQNIAQPLHLGPLITLSQSAHIYDDCWENADRLLQTQYPHCQPRTYSDPAGSFLISLE 421 >gi|115299494|gb|ABI93717.1| dihydrofolate reductase-thymidylate synthase [Paramecium primaurelia] Length = 93 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 8/93 (8%) Query: 92 PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + +Y +DQ+ I+Q L+ +P SRR I+SAWN + + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDCQSEYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 PPCH + Q +V NGKLSC +YQRS D LGIPF Sbjct: 61 PPCHVMSQSFVANGKLSCMMYQRSCDFGLGIPF 93 >gi|2160270|dbj|BAA03157.1| thymidylate synthase [Methylobacillus glycogenes] Length = 64 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 44/64 (68%), Positives = 53/64 (82%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M Y DL+RHV++ G + DRTG GT S FGYQMRFDL++GFPLLTTKKVH KS++HELL Sbjct: 1 MKVYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAEGFPLLTTKKVHLKSIIHELL 60 Query: 61 WFLR 64 WFL+ Sbjct: 61 WFLQ 64 >gi|189427010|ref|YP_001950109.1| deoxyuridylate hydroxymethyltransferase [Ralstonia phage RSL1] gi|189233322|dbj|BAG41679.1| deoxyuridylate hydroxymethyltransferase [Ralstonia phage RSL1] Length = 414 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 88/249 (35%), Gaps = 26/249 (10%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFD-LSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 L + G R G R + + + + + E LW L G Sbjct: 59 LETICTVGLKTDSRNGPVIRFPTPVTSVYTHPRQRVSFDAVRDANPFLHLMEALWMLAGR 118 Query: 67 SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126 ++V + + + E+ D L YG +WR DQ+++I+ L+ +P SR Sbjct: 119 NDVEFASYYAKQML-EYTDDGSTLNGAYGFRWRQHF-----GYDQLNAIIDELKKNPASR 172 Query: 127 RHIVSAWNVA------------------LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168 R ++ W+ + L PC+ F GKL+ + RS Sbjct: 173 RCVLQMWDASREFYSREDSWAVRRESDLLNQGSKDLPCNTSVMFDAQLGKLNMTVTNRSN 232 Query: 169 DVFLG-IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 D+ G N+ +S+L +A G G + ++H+Y + + Sbjct: 233 DMIWGCYGANVVHFSMLHEYVAEKCGLPLGHYYQVSNNLHVYLEFDITKRFIVDTTYGVQ 292 Query: 228 PQMIINPNI 236 P + P++ Sbjct: 293 PVLRKGPDV 301 >gi|167841922|ref|ZP_02468606.1| thymidylate synthase [Burkholderia thailandensis MSMB43] Length = 288 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 16/223 (7%) Query: 6 DLLR----HVIKFGSDRRDRTGVGTRST-FGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 DL+R +++K G + R G ++ Y ++ S+ L K + + ELL Sbjct: 28 DLVRQGIHNIVKEGRKIKSRAGDAMQAYGVNYILKDPRSRVHSLRNGAK---RYLCRELL 84 Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 + G + W DKDG + YG + + +Q + IV L+ Sbjct: 85 AYFSGSLKAENGLANASKFWMTLTDKDGNVNSNYGYYV--FYEPVEKYGNQYNWIVSMLK 142 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 ++ SRR I++ PC QF++ L C+ RS DV G+P+++ Sbjct: 143 SNQDSRRAIININQNYHKSDTKDFPCTIGMQFFIRENHLFCETISRSTDVITGLPYDMGF 202 Query: 181 YSLLTMMLASVI------GFQYGEFIHTLGDVHLYNNHFEQAD 217 +S + ++ S + Q G I +Y+N E+A Sbjct: 203 FSFVHELVHSDLVSQGYDDLQLGSTIMKTTFTQIYDNAMEKAK 245 >gi|66391837|ref|YP_238762.1| gp42 dCMP hydroxymethylase [Aeromonas phage 31] gi|62114674|gb|AAX63522.1| gp42 dCMP hydroxymethylase [Aeromonas phage 31] Length = 231 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 88/225 (39%), Gaps = 20/225 (8%) Query: 6 DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRG 65 D+L D+TGV T + D F L + EL W+L Sbjct: 11 DILARRFNNDEFVTDKTGVKTVEIAPVMFKADEPLIFGKLNNDYIE-----RELAWYLSQ 65 Query: 66 DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYS 125 V + +IW+ AD DG + YG W D +G+ Q ++++ L +DP + Sbjct: 66 SRYVHDIPGKTPAIWEAVADSDGRINSNYG--WAILSDENGS---QFANVLMHLASDPNT 120 Query: 126 RRHIVSAWNVALIDK-----MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA- 179 RR + + + M+ C Q+ + +GKL+ ++ RS D G + A Sbjct: 121 RRANMIYTRPTMHEDYKAHGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDWAW 180 Query: 180 ----SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L+ + + I + G+ + +H+Y HF + + Sbjct: 181 QDYVLKRLVDKLQSREIMVEKGDIYWCVDSLHVYERHFPMIEKYI 225 >gi|148550216|ref|YP_001270318.1| thymidylate synthase-like protein [Pseudomonas putida F1] gi|148514274|gb|ABQ81134.1| Thymidylate synthase-like protein [Pseudomonas putida F1] Length = 113 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 11/105 (10%) Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230 LG PFN+ + L + + G+ F + +GD H+Y NH + + QL R P P++ Sbjct: 9 PLGTPFNLTEGAALLSLFGRLTGYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKL 68 Query: 231 IINPNIVDL-----------LSFRYEDFTLRSYEPHAAILAKVSV 264 +I+ + DF L YE HA + A ++V Sbjct: 69 VISDRVPSFAETGKYEPEWLEKIEPSDFWLEGYEHHAPMTAPMAV 113 >gi|307352585|ref|YP_003893636.1| thymidylate synthase, methanogen type [Methanoplanus petrolearius DSM 11571] gi|307155818|gb|ADN35198.1| thymidylate synthase, methanogen type [Methanoplanus petrolearius DSM 11571] Length = 240 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 2/120 (1%) Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161 D DG IDQ+ +++ L+A+P SRR W D+ PPC Q +V +G+L+ Sbjct: 101 GDGDGKGIDQVEYLIEKLKAEPNSRRAEAITWFPPKDDQSDNPPCLQRIQCFVRDGRLNM 160 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 + RS D+ + N+ + L M+A + G + HT H+Y H D + Sbjct: 161 HVDFRSNDMLSALGANMYALVHLQKMIADRLKADVGWYSHTSVSAHMY--HERDHDELMK 218 >gi|21227339|ref|NP_633261.1| thymidylate synthase [Methanosarcina mazei Go1] gi|25091471|sp|Q8PXI1|TYSY_METMA RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|20905695|gb|AAM30933.1| Thymidylate synthase [Methanosarcina mazei Go1] Length = 217 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 4/129 (3%) Query: 89 ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 + YG + R+W +DQI +++ L+ P SRR W + K+ PC Sbjct: 86 DFEYTYGQRLRNWN----GEVDQIEYVIEKLKESPTSRRATAVTWIPPVDTKVNEVPCMI 141 Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 L F + + K+ RS D P N+ S L +A +G + G H+ Sbjct: 142 LDDFKIRDEKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAEKVGVEPGVITTVSISAHV 201 Query: 209 YNNHFEQAD 217 Y++ ++ + Sbjct: 202 YDHDWDMVE 210 >gi|90580552|ref|ZP_01236357.1| thymidylate synthase [Vibrio angustum S14] gi|90438210|gb|EAS63396.1| thymidylate synthase [Photobacterium angustum S14] Length = 99 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%) Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPRTLPQ 229 LG+ FN L ++A + G + G+ H + + H+Y + E D+QL R+P PQ Sbjct: 1 MLGLNFNQVQVFTLLALMAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKRTPFASPQ 60 Query: 230 MIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264 + IN I L +DF + YE H AI SV Sbjct: 61 LKINQKIKSLEDLETWVTLDDFEVVGYEHHDAIQYPFSV 99 >gi|115299496|gb|ABI93718.1| dihydrofolate reductase-thymidylate synthase [Paramecium primaurelia] Length = 93 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 8/93 (8%) Query: 92 PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN I +MAL Sbjct: 1 PVYGFQWRHFGAQYKDCQSDYTNQGVDQVKEIIQQLKNNPDSRRIILSAWNPMDIKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 PPCH + QF+V NGKL+C +YQRS D LGIPF Sbjct: 61 PPCHVMSQFFVSNGKLNCMMYQRSCDFGLGIPF 93 >gi|6686334|sp|O26868|TYSY_METTH RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase Length = 222 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 14/217 (6%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRF--DLSKGFPLLTTKKVHWKSVVHELLWFLR 64 L+ ++ G + RD G TR + L K ++ ++ +F Sbjct: 17 LVEKIMHDGREIRDERGSLTREVMNTVVTIKKPLGKSDDFYHIRRGSLLNIKVPEGYFWS 76 Query: 65 GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124 G+ L ++ D+ G + + +DQ+ ++ L+ Sbjct: 77 GE----KLEKYSEQF--LSGDRKGFVYTYGNRLRAHF------GVDQLDEAIRRLKNCTE 124 Query: 125 SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 SRR + W+ PC L F + +G+L RS D++ N + L Sbjct: 125 SRRATMVTWDPPEDTASDEVPCMILVDFKIRDGRLFTTALWRSHDIYGAWFPNAVGLAYL 184 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +A+ +G + G H+Y +F++A+ + Sbjct: 185 ADHVAAEVGVEVGHITIHSISAHIYEVNFKEAEEVIK 221 >gi|15678799|ref|NP_275916.1| thymidylate synthase [Methanothermobacter thermautotrophicus str. Delta H] gi|2621865|gb|AAB85277.1| thymidylate synthase [Methanothermobacter thermautotrophicus str. Delta H] Length = 227 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 14/217 (6%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRF--DLSKGFPLLTTKKVHWKSVVHELLWFLR 64 L+ ++ G + RD G TR + L K ++ ++ +F Sbjct: 22 LVEKIMHDGREIRDERGSLTREVMNTVVTIKKPLGKSDDFYHIRRGSLLNIKVPEGYFWS 81 Query: 65 GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124 G+ L ++ D+ G + + +DQ+ ++ L+ Sbjct: 82 GE----KLEKYSEQF--LSGDRKGFVYTYGNRLRAHF------GVDQLDEAIRRLKNCTE 129 Query: 125 SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 SRR + W+ PC L F + +G+L RS D++ N + L Sbjct: 130 SRRATMVTWDPPEDTASDEVPCMILVDFKIRDGRLFTTALWRSHDIYGAWFPNAVGLAYL 189 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +A+ +G + G H+Y +F++A+ + Sbjct: 190 ADHVAAEVGVEVGHITIHSISAHIYEVNFKEAEEVIK 226 >gi|115299498|gb|ABI93719.1| dihydrofolate reductase-thymidylate synthase [Paramecium primaurelia] Length = 93 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 8/93 (8%) Query: 92 PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY +DQ+ I+Q L+ +P SRR I+SAWN + +MAL Sbjct: 1 PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 PPCH + QF+V NGKLSC +YQ S D LGIPF Sbjct: 61 PPCHVMSQFFVANGKLSCMMYQSSCDFGLGIPF 93 >gi|20093327|ref|NP_619402.1| thymidylate synthase [Methanosarcina acetivorans C2A] gi|19918687|gb|AAM07882.1| thymidylate synthase [Methanosarcina acetivorans C2A] Length = 230 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 4/129 (3%) Query: 89 ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 + YG + R+W +DQI +++ L+ P SRR W + K+ PC Sbjct: 99 DFEYTYGQRLRNWN----EEVDQIEYVIEKLQESPTSRRATAVTWIPPVDTKVNEVPCMI 154 Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 L F + +GK+ RS D P N+ S L +A +G + G H+ Sbjct: 155 LDDFKIRDGKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAGRVGVEPGMITTVSISAHV 214 Query: 209 YNNHFEQAD 217 Y++ ++ + Sbjct: 215 YDHDWDMVE 223 >gi|25091474|sp|Q8THH4|TYSY_METAC RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase Length = 217 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 4/129 (3%) Query: 89 ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 + YG + R+W +DQI +++ L+ P SRR W + K+ PC Sbjct: 86 DFEYTYGQRLRNWN----EEVDQIEYVIEKLQESPTSRRATAVTWIPPVDTKVNEVPCMI 141 Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 L F + +GK+ RS D P N+ S L +A +G + G H+ Sbjct: 142 LDDFKIRDGKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAGRVGVEPGMITTVSISAHV 201 Query: 209 YNNHFEQAD 217 Y++ ++ + Sbjct: 202 YDHDWDMVE 210 >gi|312136483|ref|YP_004003820.1| thymidylate synthase, methanogen type [Methanothermus fervidus DSM 2088] gi|311224202|gb|ADP77058.1| thymidylate synthase, methanogen type [Methanothermus fervidus DSM 2088] Length = 223 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 16/214 (7%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFG--YQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR 64 L+ V++ G +D G T+ +++ + ++T K S+ + W R Sbjct: 17 LVSLVMEKGHKIKDERGQITKELLNILTIVKYPIKNYPFPISTNKEILLSIPKDYYW--R 74 Query: 65 GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124 GD Y + DK G + YG + R D +DQI +I++ L+ Sbjct: 75 GDKLSKYTDQFLKK------DKKGFV-YTYGNRLR-----DHFSVDQIKAIIKRLKKCKK 122 Query: 125 SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 SRR W+ + K PC F + N KL RS D++ N A+ ++L Sbjct: 123 SRRATAVTWDPKIDFKNEEVPCMISIDFKIRNNKLHTTGIWRSHDIYQAWLPNAAALAIL 182 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 ++ + + G H+Y F+ A+ Sbjct: 183 AKYISDKLNIKVGPLAIHSISAHIYEYCFDDAEK 216 >gi|62327210|ref|YP_223948.1| thymidylate synthase [Phage phiJL001] gi|50059528|gb|AAT69500.1| thymidylate synthase [Phage phiJL001] Length = 350 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 14/217 (6%) Query: 13 KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLT-TKKVHWKSVVHELLWFLRGDSNVSY 71 + G R R G + ++ + L + + + + E LW L G ++++ Sbjct: 22 ESGLTRETRNGGAVVAPEPVTTVYEQPRERVLFSKLRDANPFFHLFEALWMLAGRHDLAF 81 Query: 72 LHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131 + + ++ ++D + YG +WR++ D DQ+S V LR P RR +V Sbjct: 82 VEKFAKNM-RSFSDDGETMWGAYGWRWRTFFD-----FDQLSWAVHRLRRLPNDRRVVVQ 135 Query: 132 AWNVALIDKMAL-----PPCHCLFQFYV-DNGKLSCQLYQRSGDVFLG-IPFNIASYSLL 184 W L + A PC+ F + D G+L ++ RS D+ G N+ S+L Sbjct: 136 MWAAGLDQERADAGGKDVPCNIAIHFRINDRGQLDMTVWNRSNDIIWGAYGANVVHMSIL 195 Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +AS +G + G + D H Y++ F + +S Sbjct: 196 QEYVASAVGVEVGRYWQVSDDYHAYSDLFNKMLPLMS 232 >gi|187932666|ref|YP_001885547.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B] gi|187720819|gb|ACD22040.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B] Length = 333 Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 15/195 (7%) Query: 49 KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIY-GVQWRSWPDYDGN 107 + + EL+W + G+ +++W+ +K G IY G + + G Sbjct: 59 PISIGYALAELVWIINGEEKSDI-----INMWNPSLEKYAGRGDIYHGAYGKRIRSHFG- 112 Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVAL-------IDKMALPPCHCLFQFYVDNGKLS 160 DQI ++L+ P SR+ ++ ++ + I + PC+ V NGKL Sbjct: 113 -FDQIEKAYEALQNTPESRQVVIQIYDTKVDFPIEKGIPQDEDIPCNICSLLKVRNGKLE 171 Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 RS DV LG+P+N ++ L +LA + G + H +HLY + + Sbjct: 172 WSQIMRSNDVLLGMPYNFIQFTGLQEILAGWLELDLGSYNHYSDSLHLYARDINKIGIGQ 231 Query: 221 SRSPRTLPQMIINPN 235 R + ++ N Sbjct: 232 EVEIRNNDSLSLSRN 246 >gi|296108807|ref|YP_003615756.1| thymidylate synthase, methanogen type [Methanocaldococcus infernus ME] gi|295433621|gb|ADG12792.1| thymidylate synthase, methanogen type [Methanocaldococcus infernus ME] Length = 212 Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 21/212 (9%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 Y L++ +++ GS+ G + ++ K + + + ++ Sbjct: 10 KAYEILVKEILEKGSEMITEDGQRCKELLNVFVKITNPKLKSISSKYPLGKNAIESYKKQ 69 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI-DQISSIVQSLR 120 L G N Y + R +P YD + DQ+S +++ L+ Sbjct: 70 LLEGSQN--------------------NFTYNYYERIREYPSYDRKLKNDQLSYVIEKLK 109 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 + SRR ++S W + K+ PC F + KL + RS D+ L N Sbjct: 110 NNSTSRRAVISLWQPFIDQKVKDVPCLQHIGFQLREDKLIMSVLFRSNDILLAFHSNALG 169 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 L ++A + + E+ H + + H+Y + Sbjct: 170 LISLGELVAKSLEVELKEYNHFIYNAHIYIDR 201 >gi|89899864|ref|YP_522335.1| thymidylate synthase [Rhodoferax ferrireducens T118] gi|89344601|gb|ABD68804.1| thymidylate synthase [Rhodoferax ferrireducens T118] Length = 347 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 15/175 (8%) Query: 50 VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNV 108 ++ + E++W L G ++L + W+ K G G +G + G Sbjct: 61 INPAFAIAEVIWILLGSDASNFL-----NFWNPVLPKYAGSGGTYHGAYGARLRTHFG-- 113 Query: 109 IDQISSIVQSLRADPYSRRHIVSAWN-VALIDKMA------LPPCHCLFQFYVDNGKLSC 161 +DQI + Q L A+P SR+ ++ W+ + PC+ + V KL Sbjct: 114 LDQIERVYQILSANPESRQAVLQIWDSREDLPLSDGASRDLDIPCNLVGMLKVRAQKLEW 173 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 RS DVFLG P N+ ++ L ++A +G G F +HLY + +++ Sbjct: 174 LQIMRSNDVFLGTPHNLVQFTSLQEIIAGWLGIGIGSFSLVTDSLHLYEHDYDRC 228 >gi|998793|gb|AAB34157.1| thymidylate synthase [Pneumocystis carinii] Length = 99 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 14/99 (14%) Query: 93 IYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144 IYG QWR + +Y G +DQ+++I+Q +R PY RR I+SAWN A ++KMALP Sbjct: 1 IYGFQWRHFGAEYIDCKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALP 60 Query: 145 PCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFN 177 PCH QFYV +LSCQLYQRS D+ LG+PFN Sbjct: 61 PCHMFCQFYVHIPSNNHRPELSCQLYQRSCDMGLGVPFN 99 >gi|152002544|dbj|BAF73568.1| thymidylate synthase [Onion yellows phytoplasma OY-W] Length = 79 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 35/79 (44%), Positives = 53/79 (67%) Query: 186 MMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYE 245 MM+A V Q EFIHTLGD H+Y+NH Q Q+ R+P+ LPQMI+NP+I ++ F++ Sbjct: 1 MMVAQVTNLQSYEFIHTLGDAHIYSNHLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFI 60 Query: 246 DFTLRSYEPHAAILAKVSV 264 FTL++Y+ + ++V Sbjct: 61 YFTLQNYQCDGILKGDIAV 79 >gi|153840538|ref|ZP_01993205.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810] gi|149745801|gb|EDM56931.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810] Length = 136 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 14/122 (11%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL + ++ G +RTG + + +D++ FPL+TT+K WK+ V E Sbjct: 1 MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106 LL ++RG N + G WD A+ + ++G +YGVQ R+W Sbjct: 61 LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWACQTV 120 Query: 107 NV 108 Sbjct: 121 GQ 122 >gi|296417085|ref|XP_002838194.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634111|emb|CAZ82385.1| unnamed protein product [Tuber melanosporum] Length = 95 Score = 99 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 53/95 (55%) Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + L F++ S +LLT+M+A + G + GE I +GD H+Y++H + Q R P+ Sbjct: 1 MALRFQFSMGSLALLTIMIAHMYGQEAGELIPIMGDAHVYSDHADTLKGQFERDPKEFHT 60 Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 ++IN + D+ ++E F L Y+P + +SV Sbjct: 61 LMINRQVDDIDDSKFECFELLGYDPRPSNQMNMSV 95 >gi|254490282|ref|ZP_05103471.1| hypothetical protein MDMS009_614 [Methylophaga thiooxidans DMS010] gi|224464415|gb|EEF80675.1| hypothetical protein MDMS009_614 [Methylophaga thiooxydans DMS010] Length = 82 Score = 99.6 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSF---- 242 +A + G + G+ H + + H+Y + E D+QL R P P++ INP I L Sbjct: 1 MAQISGLKPGKAYHKIANAHIYEDQLELMRDVQLKREPFASPKLHINPEIKSLSDLETWV 60 Query: 243 RYEDFTLRSYEPHAAILAKVSV 264 DF + Y+ H I SV Sbjct: 61 TLADFEVEGYQSHEPIAYPFSV 82 >gi|282599167|ref|YP_003359084.1| deoxyuridylate hydroxymethyltransferase [Deftia phage phiW-14] gi|257219237|gb|ACV50252.1| deoxyuridylate hydroxymethyltransferase [Deftia phage phiW-14] Length = 357 Score = 99.6 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 27/226 (11%) Query: 14 FGSDRRDRTGVGTRSTFGYQMRF---DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70 G + R G T F ++F D L +K + +V E W + G N+ Sbjct: 26 TGQYKECRNGGST---FLRNVKFHITDPRNRNLTLNGRKSNIFQMVAETFWVMSGSGNIK 82 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 + +++D YG + + +Q+ S + L D +RR V Sbjct: 83 EFLEFFLPRAPQYSDDGINWHGAYGPRMYAH--------NQLQSAIDLLIKDKDTRRAYV 134 Query: 131 SAWNVALI------------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP-FN 177 + L PC+ + KL ++ QRSGD+ G N Sbjct: 135 MIADPTLDSAPAIEAAYGVGHSPKDVPCNREIHINIIEDKLCMKVIQRSGDMLFGTGSIN 194 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 ++ L +L+ G+ G++ + D H Y +Q + L Sbjct: 195 PFEFTFLQELLSEATGYALGDYQWDVTDAHYYKAFEDQVNDVLRSE 240 >gi|67922327|ref|ZP_00515839.1| Thymidylate synthase [Crocosphaera watsonii WH 8501] gi|67855778|gb|EAM51025.1| Thymidylate synthase [Crocosphaera watsonii WH 8501] Length = 502 Score = 99.2 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 12/166 (7%) Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 +++ + I D+ K+G + YG + RSW + DQI + L +D S R + Sbjct: 254 EFINDYIGQILDDAPQKEG-VKYTYGQRLRSWFER-----DQIKQAIDKLISDKDSSRVV 307 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 +S W+V + PPC + + +LS RS D+F P N L + Sbjct: 308 MSLWDVKDYENNDSPPCLNHIWVRIVDDELSLTATFRSNDMFSAWPANAMGLRELQQHII 367 Query: 190 SVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229 + FQ G I H+Y++ +E AD + R + Q Sbjct: 368 EEVNNKYQHNFQLGPLIIISQSAHIYSDCWEHADKVIETEYRRICQ 413 >gi|325959916|ref|YP_004291382.1| thymidylate synthase [Methanobacterium sp. AL-21] gi|325331348|gb|ADZ10410.1| thymidylate synthase, methanogen type [Methanobacterium sp. AL-21] Length = 205 Score = 99.2 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 70/210 (33%), Gaps = 24/210 (11%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 L++ ++ G + +D G T+ + P T + F G+ Sbjct: 17 LVKKIVSKGVEIKDERGSVTKELLNTVVNVTD----PSNTESPEGY---------FWTGE 63 Query: 67 SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126 Y + DK G + + IDQI V L SR Sbjct: 64 KLDKYSEQF------LSGDKQGFVYTYGNRLRAHF-----GGIDQIQEAVMRLNNFKESR 112 Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 R I W+ + + PC L F + +G+L RS D++ N S L Sbjct: 113 RAISITWDPLVDTQNDEVPCMMLVDFKIRDGELHTTGLWRSHDIYGAWFPNAVGLSNLAK 172 Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 +A G + G H+Y +F++A Sbjct: 173 YVAEETGSKLGTLTIHSISAHIYEVNFKEA 202 >gi|91773067|ref|YP_565759.1| thymidylate synthase [Methanococcoides burtonii DSM 6242] gi|121686818|sp|Q12X17|TYSY_METBU RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|91712082|gb|ABE52009.1| Thymidylate synthase [Methanococcoides burtonii DSM 6242] Length = 217 Score = 98.8 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 4/133 (3%) Query: 89 ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148 + YG + R+W +DQI +++ L + +RR W + K+ PC Sbjct: 86 DFEYTYGQRLRNWD----GKVDQIEYVIEKLTNNKTTRRATAVTWVPTIDTKVDEVPCMI 141 Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 + F + + + RS D P N+ S L +A +G G H+ Sbjct: 142 IDDFKIRDDTVHLTTLFRSHDFAGAYPANLYGLSKLLEYVADKVGLAPGTITTMSVSAHI 201 Query: 209 YNNHFEQADLQLS 221 Y++ +++ + + Sbjct: 202 YDHDWDKIEKIIK 214 >gi|154150064|ref|YP_001403682.1| thymidylate synthase [Candidatus Methanoregula boonei 6A8] gi|153998616|gb|ABS55039.1| thymidylate synthase [Methanoregula boonei 6A8] Length = 241 Score = 98.8 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 55/124 (44%) Query: 86 KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145 + G ++ R + D +DQI I LR P SRR I WN + +K+ P Sbjct: 81 EYDYHGRLFDWGERLFVDGVPVHVDQIEYIATKLRQSPVSRRAIAITWNPVIDEKLNDCP 140 Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 C L Q + +GKL ++ RS D+ N+ + L +A +G + G + H Sbjct: 141 CLQLVQCVLRDGKLCMRVIFRSNDMLTAAGANMYALVQLQKSIAERLGVECGTYTHISLV 200 Query: 206 VHLY 209 H+Y Sbjct: 201 PHIY 204 >gi|172035298|ref|YP_001801799.1| hypothetical protein cce_0382 [Cyanothece sp. ATCC 51142] gi|171696752|gb|ACB49733.1| hypothetical protein cce_0382 [Cyanothece sp. ATCC 51142] Length = 502 Score = 98.4 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 72/180 (40%), Gaps = 17/180 (9%) Query: 55 VVHELLWFLRGDSNVSYLHRHGVS-----IWDEWADKDGELGPIYGVQWRSWPDYDGNVI 109 + E L F SN + R ++ I D+ K+G + YG + RSW + Sbjct: 234 ITDEPLNFYFPSSNYLPIKRDFINDYIGQILDDAPQKEG-VKYTYGQRLRSWFER----- 287 Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQI + L D S R ++S W+V + PPC + + +LS RS D Sbjct: 288 DQIQQAIDKLITDKDSSRVVMSLWDVKDYENNDSPPCLNHIWVRIVDNELSLTATFRSND 347 Query: 170 VFLGIPFNIASYSLLTMMLASVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 +F P N L + I FQ+G I H+Y++ +E AD + Sbjct: 348 MFSAWPANAMGLRALQKHIIEQINKTSNHNFQFGPLIIISQSAHIYSDCWEHADKVIETE 407 >gi|149408287|ref|YP_001294566.1| hypothetical protein ORF058 [Pseudomonas phage M6] Length = 351 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 78/210 (37%), Gaps = 15/210 (7%) Query: 14 FGSDRRDRTGVGTRSTFGYQMR---FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70 G R R G F + ++ + + + E LW L G ++V Sbjct: 23 EGVRRDSRNGP--VFMFPEPVTTVYLRPAERVLFWAERDANPFFHLMESLWMLGGRNDVE 80 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 Y+ R V ++D YG +WR DQ+ I+ +L+ + RR ++ Sbjct: 81 YVARF-VDRMRSYSDDGLTFHGAYGFRWRQHF-----FEDQLPKIIAALKENRDDRRQVL 134 Query: 131 SAWNVALI--DKMALPPCHCLFQFYVD-NGKLSCQLYQRSGDVFLG-IPFNIASYSLLTM 186 S W+ + PC+ F + +G+L + RS D+ G N +S L Sbjct: 135 SMWDADADLGRQGKDLPCNLQAIFQIACDGRLDMTVTNRSNDLIWGAYGANAVHFSYLHE 194 Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 +A +G + G + + H Y + Sbjct: 195 YVARSVGVEQGIYRQVSANFHAYEEVLNKV 224 >gi|13022108|gb|AAK11643.1| thymidylate synthetase [Babesia bovis] Length = 109 Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 22/109 (20%) Query: 94 YGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV---------- 135 YG QWR + DY G IDQ++ I+ ++ +P R IV +WNV Sbjct: 1 YGFQWRHFGAEYLDMHADYTGKGIDQLAEIINRIKTNPNDRMLIVCSWNVSGGFLFSPFF 60 Query: 136 ----ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 A + KMALPPCHC FQFYV + KLSC ++QRS D+ LG+PFNIAS Sbjct: 61 TIMFADLKKMALPPCHCFFQFYVSDNKLSCMMHQRSCDLGLGVPFNIAS 109 >gi|162135099|ref|YP_001595840.1| hypothetical protein [Pseudomonas phage YuA] gi|161513946|emb|CAO77772.1| hypothetical protein [Pseudomonas phage YuA] Length = 351 Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 15/210 (7%) Query: 14 FGSDRRDRTGVGTRSTFGYQMR---FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70 G R R G F + ++ + + + E LW L G ++V Sbjct: 23 EGVRRDSRNGP--VFMFPEPVTTVYLRPAERVLFWAERDANPFFHLMESLWMLGGRNDVE 80 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 Y+ R V ++D YG +WR DQ+ I+ +L+A+ RR ++ Sbjct: 81 YVARF-VDRMRSYSDDGLTFHGAYGFRWRQHF-----FEDQLPKIIAALKANRDDRRQVL 134 Query: 131 SAWNVALI--DKMALPPCHCLFQFYVD-NGKLSCQLYQRSGDVFLG-IPFNIASYSLLTM 186 S W+ + PC+ F + +G+L + RS D+ G N +S L Sbjct: 135 SMWDADADLGRQGKDLPCNLQAIFQIACDGRLDMTVTNRSNDLIWGAYGANAVHFSYLHE 194 Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 +A +G + G + + H Y + Sbjct: 195 YVARSVGVEQGIYRQVSANFHAYEEVLTKV 224 >gi|309790377|ref|ZP_07684942.1| thymidylate synthase [Oscillochloris trichoides DG6] gi|308227569|gb|EFO81232.1| thymidylate synthase [Oscillochloris trichoides DG6] Length = 484 Score = 97.3 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 10/172 (5%) Query: 91 GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150 G Y R +DG IDQ+++I LR+ SRR + WN A PPC L Sbjct: 253 GVSYTYGAR-LRTFDGQ-IDQVAAICADLRSAATSRRALAVLWNPHQDAGSANPPCLNLV 310 Query: 151 QFYVD------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI-GFQYGEFIHTL 203 Q + +L +Y RS D+F P N + L ++A + G + G+ Sbjct: 311 QARLRPAPGEATPRLFLTVYFRSHDIFRAWPANAYALRALQALIAEELGGVELGDLAILS 370 Query: 204 GDVHLYNNHFEQADLQLSRSPRTL-PQMIINPNIVDLLSFRYEDFTLRSYEP 254 H+Y + +E A L++ R P++I + ++ ++R Y P Sbjct: 371 HSAHIYAHDWEAAAELLAQHYRPQNPRLIHDQRGAFVIVLEPPVISVRHYSP 422 >gi|310722439|ref|YP_003969263.1| dCMP hydroxymethylase [Aeromonas phage phiAS4] gi|306021282|gb|ADM79817.1| dCMP hydroxymethylase [Aeromonas phage phiAS4] Length = 227 Score = 97.3 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 24/227 (10%) Query: 8 LRHVI----KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 +R ++ K D++GV T + D F K++ + EL W+L Sbjct: 9 IRDIMVSKYKSNEFVTDKSGVKTVEIAPVMFKADEDLIFG-----KLNHDYIERELSWYL 63 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 V+ + +IW+ AD +G + YG W + +Q +++V+ L +P Sbjct: 64 SQSRYVADIPGKTPAIWEAVADCNGMINSNYG-----WAIFSEENGNQFANVVKHLIENP 118 Query: 124 YSRRHIVSAWNVALIDK-----MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 Y+RR + ++ M+ C Q+ + +GKL+ ++ RS D G + Sbjct: 119 YTRRANMIYTRPSMHTDYNANGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDW 178 Query: 179 A-----SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 A L+ + + I + G+ +H+Y HF + + Sbjct: 179 AWQDYVLSRLVDTLQSHEIMVEKGDIYWCADSLHVYERHFGLIEQYI 225 >gi|282599234|ref|YP_003358546.1| putative thymidylate synthase [Shigella phage phiSboM-AG3] gi|226973540|gb|ACO94293.1| putative thymidylate synthase [Shigella phage phiSboM-AG3] Length = 348 Score = 97.3 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 24/209 (11%) Query: 25 GTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83 GTR G + D+ + + + + + E W L G +++ +L R + + Sbjct: 37 GTRFLDGVTITVSDIRDRWLSVEGRNSSAIAAIGETFWVLSGRNDIKFLSRV-LPRAANF 95 Query: 84 ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 +D YG + + Q+ S++ LR +P +R+ ++ ++ AL L Sbjct: 96 SDDGVTWRAAYGPRLYAHG--------QLDSVINRLRKNPNTRQAYLTIYDPALDSDAGL 147 Query: 144 P-------------PCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP-FNIASYSLLTMMLA 189 C+ F + +G+L+ + RS DV G+ N +S+L ++A Sbjct: 148 AKFSESGEAKTKDMVCNLALLFAIVDGRLNLTVINRSQDVLWGMSSINFIEFSILQEVIA 207 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 V+ G++ ++H YNN Q L Sbjct: 208 QVLDVDVGQYKLFSNNLHYYNNEVSQKQL 236 >gi|45358942|ref|NP_988499.1| thymidylate synthase [Methanococcus maripaludis S2] gi|45047808|emb|CAF30935.1| Thymidylate synthase [Methanococcus maripaludis S2] Length = 212 Score = 96.9 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 20/216 (9%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 L+ +++ G++ G + + + + + ++V L G Sbjct: 16 LIPKIMEEGTEMITEDGQKCKEIMNTIIEINDPSDKSISEKYPLGERAVKSYTEQLLHGS 75 Query: 67 SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126 + ++++ + I++ DK DQI IV L+ SR Sbjct: 76 A-ATFVYDYHERIFEYPNDKKELKN------------------DQIEYIVNKLKEQINSR 116 Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 R + WN + + PC + QF V + KL + RS D FL N L Sbjct: 117 RAVAITWNPYIDQSVKDVPCLQIVQFLVRDNKLYQTVLFRSNDAFLAFHANAIGLIALGE 176 Query: 187 MLASVIGFQYGEFIHTLGDVHLY-NNHFEQADLQLS 221 M+A +G + ++ H +H+Y + L Sbjct: 177 MVAEKLGIELVKYTHHSVSMHVYSERDIDNLKSFLK 212 >gi|298674842|ref|YP_003726592.1| thymidylate synthase, methanogen type [Methanohalobium evestigatum Z-7303] gi|298287830|gb|ADI73796.1| thymidylate synthase, methanogen type [Methanohalobium evestigatum Z-7303] Length = 217 Score = 96.9 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 12/178 (6%) Query: 44 LLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD 103 ++T + K + + W N L + + D YG + R+W D Sbjct: 49 MITIDDPYTKQIPEDFSW------NRERLDEYSKQL--ISGDNTQNFEYTYGQRLRNWND 100 Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 IDQIS ++ L +RR W + K+ PC + F + NGKL Sbjct: 101 ----EIDQISYVIDKLTESSSTRRATAVTWVPPIDTKVDEVPCMIIDDFKIRNGKLHLTT 156 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 RS D P N+ S L +A G G+ H+Y + +++ + + Sbjct: 157 LFRSHDFAGAYPANLYGLSGLLRYVAEKSGVSTGKITTISVSAHIYEHDWDKIEDIIK 214 >gi|109290020|ref|YP_656269.1| gp42 dCMP hydroxymethylase [Aeromonas phage 25] gi|104345693|gb|ABF72593.1| gp42 dCMP hydroxymethylase [Aeromonas phage 25] Length = 224 Score = 96.9 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 24/227 (10%) Query: 8 LRHVI----KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 +R ++ K D++GV T + D F K++ + EL W+L Sbjct: 6 IRDIMVSKYKSNEFVTDKSGVKTVEIAPVMFKADEDLIFG-----KLNHDYIERELSWYL 60 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 V+ + +IW+ AD +G + YG W + +Q +++V+ L +P Sbjct: 61 SQSRYVADIPGKTPAIWEAVADCNGMINSNYG-----WAIFSEENGNQFANVVKHLIENP 115 Query: 124 YSRRHIVSAWNVALIDK-----MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 Y+RR + ++ M+ C Q+ + +GKL+ ++ RS D G + Sbjct: 116 YTRRANMIYTRPSMHTDYNANGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDW 175 Query: 179 A-----SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 A L+ + + I + G+ +H+Y HF + + Sbjct: 176 AWQDYVLSRLVDTLQSHEIMVEKGDIYWCADSLHVYKRHFGLIEQYI 222 >gi|307150936|ref|YP_003886320.1| thymidylate synthase [Cyanothece sp. PCC 7822] gi|306981164|gb|ADN13045.1| thymidylate synthase [Cyanothece sp. PCC 7822] Length = 505 Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 12/158 (7%) Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 ++ + I ++ ++G + YG + RSW DQI ++ L A+ S R + Sbjct: 254 KFIQDYISQILEDAPQREG-VKYTYGQRLRSWFGR-----DQIEQAIEKLAAEKDSSRVV 307 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 +S W+V + PPC + + +LS RS D+F P N L + Sbjct: 308 MSLWDVEDYENNDSPPCLNHIWLRIVDNELSLTATFRSNDMFSAWPANAMGLRALQQHIL 367 Query: 190 SVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 I + G I H+Y++ +E A+ + Sbjct: 368 DNIIQKSDDSLKMGSLIIVSQSAHIYSDCWEYAERLIE 405 >gi|282899587|ref|ZP_06307551.1| hypothetical protein CRC_01035 [Cylindrospermopsis raciborskii CS-505] gi|281195466|gb|EFA70399.1| hypothetical protein CRC_01035 [Cylindrospermopsis raciborskii CS-505] Length = 510 Score = 96.5 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 15/155 (9%) Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 YL + + D+ D++G + YG + RSW DQI ++ L DP S R ++ Sbjct: 256 YLPEYISQVLDDAPDQEG-VKYTYGKRLRSWF-----GKDQIQQVIDKLINDPDSARAVM 309 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 S W+ A+ D+ PPC + + +LS RS D+F P N L + Sbjct: 310 SLWD-AVKDEHDSPPCLNHIWVRIVDDQLSLTATFRSNDMFSAWPANGMGLRALQKYIYD 368 Query: 191 VI--------GFQYGEFIHTLGDVHLYNNHFEQAD 217 I Q G I H+Y+ +E A+ Sbjct: 369 GIVRGSDIHQNLQLGPLITVSQSAHIYDECWEHAE 403 >gi|284929672|ref|YP_003422194.1| thymidylate synthase [cyanobacterium UCYN-A] gi|284810116|gb|ADB95813.1| thymidylate synthase [cyanobacterium UCYN-A] Length = 504 Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 12/155 (7%) Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 +++ + I D+ + ++G + YG + RSW DQI ++ L +D S R + Sbjct: 254 EFINDYISQILDDSSQREG-IKYTYGQRLRSWFKK-----DQIQQVIDLLVSDINSSRAV 307 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 +S W+V D PPC + +LS RS D+F P N L + + Sbjct: 308 MSLWDVNDYDNNDSPPCLNHIWIRTIDDELSLTATFRSNDMFSAWPSNAMGLRALQIHIM 367 Query: 190 SVIG------FQYGEFIHTLGDVHLYNNHFEQADL 218 I + G + H+YN+ +E AD Sbjct: 368 REIQNRINQKLKIGPLVTVSQSAHIYNDCWEYADK 402 >gi|294495255|ref|YP_003541748.1| thymidylate synthase [Methanohalophilus mahii DSM 5219] gi|292666254|gb|ADE36103.1| thymidylate synthase, methanogen type [Methanohalophilus mahii DSM 5219] Length = 217 Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 23/211 (10%) Query: 11 VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70 + G + D G + + + + + ++ W N Sbjct: 27 IWNHGENVTDERGSKIKEFMNLMVVINDP-----------YSNEIPADISW------NQE 69 Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 L + + + YG + R+W +DQIS ++ L+ +RR Sbjct: 70 RLDEYAKQL--ITGQNPQDFEYTYGQRLRNWD----ERVDQISYVIDKLKNSKTTRRATA 123 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 W + ++ PC L F V N ++ RS D P N+ S L +A Sbjct: 124 VTWIPYIDTEVDEVPCMILDDFKVRNNQVHMTTLFRSHDFAGAYPANLYGLSQLLKYVAQ 183 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 G+ G H+Y + +++ + ++ Sbjct: 184 NAGYDTGTITTISVSAHIYEHDWDRIEKIVT 214 >gi|46552|emb|CAA68823.1| thymidylate synthase [Staphylococcus aureus] Length = 66 Score = 96.1 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257 EFIHT GD H+Y+NH + QLSR PQ+ IN + + YED L +YE H A Sbjct: 1 EFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYESHPA 59 Query: 258 ILAKVSV 264 I A ++V Sbjct: 60 IKAPIAV 66 >gi|11499629|ref|NP_070871.1| thymidylate synthase, putative [Archaeoglobus fulgidus DSM 4304] gi|2648479|gb|AAB89199.1| thymidylate synthase, putative [Archaeoglobus fulgidus DSM 4304] Length = 480 Score = 95.7 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 18/220 (8%) Query: 8 LRHVIKFGSDRRDRTGVGTR------STFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 L + G + RT G S F +++ ++ K K+H K+ E Sbjct: 257 LETIYTNGKKK--RTEWGDIFEGQKESLFVHRLFLEVEKP----EENKLHDKAPFTEKY- 309 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR-SWPDYDGNVIDQISSIVQSLR 120 G H + E + G Y R + D D +DQ+ +++ L+ Sbjct: 310 ---GIEYAHDYIMHAAKLDGEVRRSILKEGEEYTYAERARYCDRDDVKVDQLYKVIEKLK 366 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 D R V + PPC +QF +L Y RS D + + N+ + Sbjct: 367 EDSCRRDCYVGISRPWDL-LSDEPPCLRGYQFSKYGDELLGTFYMRSNDAYGAMHANMYA 425 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 ++LLT +A + GF+ + H D H+Y F+ L Sbjct: 426 FALLTKYVAELTGFKSYRYNHFALDAHIYAEFFDAVREIL 465 Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 2/100 (2%) Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 + LR P++RR + W + P ++ + KL + RS + Sbjct: 127 EKLRKSPHTRRASIPLWYPKD--HLCRNPAAITEISFIFHEKLHLTAFLRSMECLSYFEH 184 Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 N + G + G + H Y E+A Sbjct: 185 NFDFLVEALETICRKTGMEEGSIGMLIAVPHFYERDVERA 224 >gi|261403513|ref|YP_003247737.1| thymidylate synthase, methanogen type [Methanocaldococcus vulcanius M7] gi|261370506|gb|ACX73255.1| thymidylate synthase, methanogen type [Methanocaldococcus vulcanius M7] Length = 221 Score = 95.7 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 68/210 (32%), Gaps = 19/210 (9%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +L+ +IK G D R + K + K++ Sbjct: 13 YENLVELIIKEGKDMITEDNQRCRELLNVAIEITNPKLKTISPKYPFGRKAI-------- 64 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI-DQISSIVQSLRAD 122 + + + Y + R +P YD V DQI +++ L ++ Sbjct: 65 ----------ESYTNQLLYGYKDESDFVYNYFERIREYPSYDRKVKNDQIKYVIEKLNSN 114 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 SRR +VS WN + + PC F L + RS D+ L N Sbjct: 115 STSRRAVVSLWNPFIDQDVKDVPCLQHIGFQKREKNLHMSVLFRSNDILLAFHSNALGLI 174 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 L +A + H + + H+Y + Sbjct: 175 KLGEYVAEKTNSTLKTYTHFIYNAHIYIDR 204 >gi|219850761|ref|YP_002465193.1| thymidylate synthase, methanogen type [Methanosphaerula palustris E1-9c] gi|219545020|gb|ACL15470.1| thymidylate synthase, methanogen type [Methanosphaerula palustris E1-9c] Length = 244 Score = 95.3 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 87/223 (39%), Gaps = 17/223 (7%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGD 66 ++ V++ G G T ++ + P+++T + + + L G Sbjct: 17 VKTVLEKGWVLGTEDGEATIECEELALQVENPTTEPMISTGSRFQRRFMEKYAADLLHGS 76 Query: 67 SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126 G+ +D G ++ R D +DQI+ I++ L+ P +R Sbjct: 77 D--------GIFEYDYH-------GRLFNWGDRLAADEAPVQVDQIAYIIRKLQEAPATR 121 Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 R + WN + +++ PC L Q + +G L ++ RS D+ N+ + L + Sbjct: 122 RALAITWNPVVDEQVKDCPCLQLVQCVIRDGALQMKVVFRSNDMLTASGANMFALVHLQL 181 Query: 187 MLASVIGFQYGEFIHTLGDVHLY-NNHFEQADLQLSRSPRTLP 228 M+A +G + G + H H+Y + +R R P Sbjct: 182 MIAEALGVRIGRYTHIALVPHVYFTRDMDDLKAFCNRGERFHP 224 >gi|291092708|gb|ADD74391.1| thymidylate synthase [uncultured virus] Length = 96 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%) Query: 10 HVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELLWFLRGDSN 68 V+K G R DRTG GTR+ FG + FDL PLL +++ +KS++ ELLWFLRG+++ Sbjct: 1 KVLKRGEQRDDRTGTGTRALFGELLEFDLRGNRLPLLNCRRLSFKSILEELLWFLRGETD 60 Query: 69 VSYLHRHGVSIWDEWADKD 87 L R GV IW E A +D Sbjct: 61 SKILERRGVHIWTEHATRD 79 >gi|303243613|ref|ZP_07329955.1| thymidylate synthase, methanogen type [Methanothermococcus okinawensis IH1] gi|302486174|gb|EFL49096.1| thymidylate synthase, methanogen type [Methanothermococcus okinawensis IH1] Length = 223 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 68/214 (31%), Gaps = 26/214 (12%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y L+ ++K G D G R + K + + K+V Sbjct: 14 YEYLVEKILKDGEDMITEDGQRCRELRNTVIEITNPKLKSISPKYPLGKKAV-------- 65 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +N + +D + N I+QI I+ L+ P Sbjct: 66 EQYTNNLLYGSKNIFSYDYHERLF-------------KYPVNNNEINQIEYIIDKLKEQP 112 Query: 124 YSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 SRR + W + PC QF + + KL + RS D+ + N Sbjct: 113 NSRRCVAITWQPDIDIEVSKKDYGSVPCLQFVQFLIRDNKLHQTVLFRSNDLMVAFVSNA 172 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 L +A +G YG + H +H+Y + Sbjct: 173 LGLIALGEKVAEEVGVDYGTYTHHSVSMHIYIDR 206 >gi|332879334|ref|ZP_08447031.1| hypothetical protein HMPREF9074_02783 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682754|gb|EGJ55654.1| hypothetical protein HMPREF9074_02783 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 177 Score = 94.6 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 19/183 (10%) Query: 38 LSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQ 97 + + + + K + EL F++G+ +V G++ WD Sbjct: 2 PADLLDIFESHGIARKKLKTELGLFMQGERDVERYREAGITWWDY----------CGQTL 51 Query: 98 WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 S+P Y + I+ I + R S+ +++ + A PC L QF +D G Sbjct: 52 VNSYPTYFEKLPPLIAQINEEKRN---SKNYVLFLGATGVETNQA--PCLSLVQFQIDEG 106 Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217 +L YQRS D LG+P +I L ++ I LG+VH+Y N+ + Sbjct: 107 ELVVSAYQRSSDANLGLPSDIYHLYL----MSRQIDLPLKSITLDLGNVHIYENNISRTK 162 Query: 218 LQL 220 L Sbjct: 163 DLL 165 >gi|322805078|emb|CBZ02638.1| thymidylate synthase [Clostridium botulinum H04402 065] Length = 196 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 6/190 (3%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62 Y+ L V G ++ Y M + + ++K + E LW+ Sbjct: 10 YIKNLNDVYYNPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIIFNFAEALWY 69 Query: 63 LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 L G +++ Y+ + ++ D G YG + S+ N I+Q + I++ + D Sbjct: 70 LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYG---YNKINQWNRIIKLFKED 126 Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 P ++R + + N L K C FQF++ KL + R+ D + GI ++ S Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186 Query: 181 YSLLTMMLAS 190 ++ + ++ Sbjct: 187 FTFIQEFFSN 196 >gi|12055931|emb|CAC20646.1| putative thymidylate synthase [Lactobacillus sakei] Length = 70 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 50/66 (75%) Query: 21 RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIW 80 RT GT S FGYQMRF+L +GFPLLTTKK+ + + ELLWFL+GDSN+ YL +H IW Sbjct: 1 RTNTGTYSLFGYQMRFNLQEGFPLLTTKKMPFGLIKSELLWFLKGDSNIRYLLQHNNHIW 60 Query: 81 DEWADK 86 DEWA + Sbjct: 61 DEWAFE 66 >gi|311993033|ref|YP_004009899.1| gp42 dCMP hydroxymethylase [Enterobacteria phage CC31] gi|284177871|gb|ADB81537.1| gp42 dCMP hydroxymethylase [Enterobacteria phage CC31] Length = 245 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 75/209 (35%), Gaps = 21/209 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TG T G F + + V EL W+ V + +I Sbjct: 27 DKTGAKTIELIGPSFVVTEDSIFGTVNQEYVE-----RELAWYKSKSLFVKDIPGGTPAI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA--- 136 W++ + GE+ YG W + +Q S L P SRR I+ + Sbjct: 82 WEQVSSSKGEINSNYG-----WAIWSAENYNQFSFCATELIEKPDSRRAIMIYTRPSMQV 136 Query: 137 --LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193 D M+ C Q+ + +G+++ + RS DV G + A + L + Sbjct: 137 DFERDGMSDFMCTNTVQYLIRDGRVNAIVNMRSNDVVFGFRNDYAWQKYVLESLVETVNA 196 Query: 194 -----FQYGEFIHTLGDVHLYNNHFEQAD 217 + G+ I G +H+Y HF D Sbjct: 197 GSGEKYVPGDIIWNAGSLHVYERHFYLVD 225 >gi|150399440|ref|YP_001323207.1| thymidylate synthase [Methanococcus vannielii SB] gi|150012143|gb|ABR54595.1| thymidylate synthase [Methanococcus vannielii SB] Length = 212 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 3/142 (2%) Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWP---DYDGNVIDQISSIVQSLRADPYSRR 127 L V + E +Y R + D DQI IV L+++ SRR Sbjct: 58 PLGERAVKSYTEQLINGCTATFVYDYHERIFKYPNDLKNRKFDQIEYIVNKLKSEKNSRR 117 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 + WN + ++ PC QF + + KL + RS D FL N L + Sbjct: 118 AVSITWNPYIDTEVKDVPCLQFVQFLIRDNKLYQTVLFRSNDAFLAFHANAIGLISLGEL 177 Query: 188 LASVIGFQYGEFIHTLGDVHLY 209 +A +G + + H +H+Y Sbjct: 178 IAEKLGIELVRYTHHSVSMHVY 199 >gi|326804560|ref|YP_004327431.1| Thymidylate synthase [Salmonella phage Vi01] gi|301795210|emb|CBW37928.1| Thymidylate synthase [Salmonella phage Vi01] Length = 346 Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 24/209 (11%) Query: 25 GTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83 GTR G + D + + + + + E W L G +++ +L + + + Sbjct: 37 GTRFIDGVTITVSDPRDRWLSVEGRNSSAIAAIGETFWVLSGRNDIRFLSKV-LPRAANF 95 Query: 84 ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 +D YG + + Q+ S++ LR +P +R+ ++ ++ AL L Sbjct: 96 SDDGVTWRGAYGPRLYNNG--------QLDSVISRLRNNPNTRQAYLTIYDPALDSDEGL 147 Query: 144 PP-------------CHCLFQFYVDNGKLSCQLYQRSGDVFLGIP-FNIASYSLLTMMLA 189 C+ F + G+L+ + RS DV G+ N +S+L +LA Sbjct: 148 AAHSETGEAKTKDMICNLALLFSITEGRLNITVINRSQDVLWGMSSINFIEFSILQEVLA 207 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 V+ + G + ++H YNN + L Sbjct: 208 KVLNVEVGYYKLFSNNLHYYNNEVSRKQL 236 >gi|150401473|ref|YP_001325239.1| thymidylate synthase [Methanococcus aeolicus Nankai-3] gi|150014176|gb|ABR56627.1| thymidylate synthase [Methanococcus aeolicus Nankai-3] Length = 222 Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 71/214 (33%), Gaps = 26/214 (12%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 Y +L++ V+K G D G R + K + + K+V Sbjct: 13 YEELVKEVLKNGEDMITEDGQKCREIRNTVIEITNPKLKSISPKYPLGKKAV-------- 64 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123 +N V +D + + I+QI IV+ L+ Sbjct: 65 EQYTNNLLYGSENVFSYDYHSRLF-------------KYPVNNKEINQIDFIVEKLKEQQ 111 Query: 124 YSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178 SRR + W + PC QF + + KL + RS D+ + N Sbjct: 112 NSRRCVAITWQPNIDIEVSNKDHGSVPCLQFVQFLIRDNKLYQTVLFRSNDLAVAFVSNA 171 Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 L M+A +G YG + H +H+Y + Sbjct: 172 LGLIALGEMVAEKVGVDYGTYTHHSVSMHIYIDR 205 >gi|218437721|ref|YP_002376050.1| thymidylate synthase [Cyanothece sp. PCC 7424] gi|218170449|gb|ACK69182.1| thymidylate synthase [Cyanothece sp. PCC 7424] Length = 512 Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 12/157 (7%) Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 L + + + + ++G + YG + RSW DQI +++ L D S R + Sbjct: 254 QNLQNYIEQMLSDLSSQEG-VEYTYGKRLRSWFKQ-----DQIEQVIKKLTLDINSSRAV 307 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 +S W+V + PPC V +LS RS D+F P N L + Sbjct: 308 MSLWDVHDHEGNDNPPCLNHIWLRVVENELSLTATFRSNDMFSAWPANAMGLRALQQHIL 367 Query: 190 SVIG------FQYGEFIHTLGDVHLYNNHFEQADLQL 220 I + G I H+Y++ +E AD + Sbjct: 368 DNINQRASYSLKMGPLITVSQSAHIYSDCWEYADRLI 404 >gi|159905677|ref|YP_001549339.1| thymidylate synthase [Methanococcus maripaludis C6] gi|159887170|gb|ABX02107.1| thymidylate synthase, methanogen type [Methanococcus maripaludis C6] Length = 210 Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 76/204 (37%), Gaps = 19/204 (9%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 L+ +++ G++ G + + + ++ ++V L G Sbjct: 16 LIPKIMEEGTEMVTEDGQKCKEIMNTLIEITDPSDKSISEKYQLGERAVKSYTEQLLYGS 75 Query: 67 SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126 + ++++ + I++ DK DQI IV L+ SR Sbjct: 76 A-ATFVYDYHERIFEYPNDKKELKN------------------DQIEYIVNKLKEQINSR 116 Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 R + WN + + PC + QF V + KL + RS D FL N L Sbjct: 117 RAVAITWNPYIDQTVKDVPCLQIVQFLVRDNKLYQTVLFRSNDAFLAFHANAIGLIALGE 176 Query: 187 MLASVIGFQYGEFIHTLGDVHLYN 210 M+A +G + ++ H +H+Y+ Sbjct: 177 MVAEKLGIELVKYTHHSVSMHVYS 200 >gi|257059146|ref|YP_003137034.1| thymidylate synthase [Cyanothece sp. PCC 8802] gi|256589312|gb|ACV00199.1| thymidylate synthase [Cyanothece sp. PCC 8802] Length = 508 Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 12/183 (6%) Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 ++ + I D+ ++G + YG + RSW DQI +Q L + S R + Sbjct: 254 KFIEDYISQILDDAPQQEG-VKYTYGQRLRSWFGR-----DQIEQAIQKLVIEKDSSRVV 307 Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 +S W+V D PPC + N +LS RS D+F N L + Sbjct: 308 MSLWDVRDYDNNDSPPCLNHIWLRIVNDELSLTATFRSNDMFSAWVANAMGLRALQQHIL 367 Query: 190 SVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243 I + G I H+Y++ +E AD + L Q + R Sbjct: 368 DNIVSKADYNLKMGPLITVSQSAHIYSDCWEHADRLIQTEYVKLCQQRDYTDPSGSFLIR 427 Query: 244 YED 246 +D Sbjct: 428 LDD 430 >gi|222873482|gb|EEF10613.1| predicted protein [Populus trichocarpa] Length = 57 Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 37/57 (64%), Positives = 49/57 (85%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57 M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDL++GFP++TTKK+H KS++H Sbjct: 1 MKQYLDFMRHVYEHGTEKSDRTGTGTRSVFGYQMRFDLNEGFPVVTTKKLHLKSIIH 57 >gi|32034581|ref|ZP_00134737.1| COG0207: Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 133 Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 2/89 (2%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58 M QYLDL ++ G +RTG + + ++++ G FPL+TT++ WK+ + E Sbjct: 1 MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60 Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD 87 LL ++RG N + + G WD A+++ Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQN 89 >gi|323941565|gb|EGB37746.1| thymidylate synthase [Escherichia coli E482] Length = 52 Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 32/52 (61%) Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 +Q LQLSR PR LP++II + +R+EDF + Y+PH I A V++ Sbjct: 1 MDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 52 >gi|115299500|gb|ABI93720.1| dihydrofolate reductase-thymidylate synthase [Paramecium primaurelia] Length = 93 Score = 92.3 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 8/93 (8%) Query: 92 PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143 P+YG QWR + DY DQ+ I+QSL+ +P SRR I+SA N +M+L Sbjct: 1 PVYGFQWRHFGAKYKDCQTDYSNQGADQVKGIIQSLKNNPDSRRIILSARNPIDFKQMSL 60 Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176 PPCH + QF+V NGKL YQRS D LGIPF Sbjct: 61 PPCHVMSQFFVANGKLIRMTYQRSCDFGLGIPF 93 >gi|327314456|ref|YP_004329893.1| thymidylate synthase [Prevotella denticola F0289] gi|326946285|gb|AEA22170.1| thymidylate synthase [Prevotella denticola F0289] Length = 332 Score = 92.3 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 92/231 (39%), Gaps = 27/231 (11%) Query: 6 DLLRHVIKFGSDRRDRTGVGTRSTFGYQMR--FDLSKGFPLLTTKKVHWKSVVHELLWFL 63 D R ++K G R R + M D + + ++ + E LW Sbjct: 15 DTCRLILKEGVCRETRQ-LKCYELPEPYMVKLTDPTARMITIAERQWYAPLAYAESLWIA 73 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG------------NVIDQ 111 G ++++Y++ +G ++ +++D + YG + R + + N +DQ Sbjct: 74 TGRNDMNYINLYGRNL-KKFSDNGETMRGAYGPRLRHYNGDECDYNIHEIYDELPNEVDQ 132 Query: 112 ISSIVQSLRADPYSRRHIVSAWNVAL--------IDKMALPPCHCLFQFYVDNG--KLSC 161 ++ + D +R+ +++ + + PC + F D KL+ Sbjct: 133 FRYVIDCFKKDINTRQAVINIGDPVKDCFGIDRNLKVTKDIPCTRMLHFMKDANANKLNL 192 Query: 162 QLYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 + RS D+ G NI +++ + A+++G + G + H ++H Y + Sbjct: 193 IVSMRSNDLIWGASAVNIFNFTWMQEYFAAILGMEIGSYYHIADNLHYYED 243 >gi|9632636|ref|NP_049659.1| gp42 dCMP hydroxymethylase [Enterobacteria phage T4] gi|118788|sp|P08773|DCHM_BPT4 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase; Short=Deoxycytidylate hydroxymethylase; AltName: Full=dCMP hydroxymethylase; Short=dCMP HMase gi|4389322|pdb|1B5D|A Chain A, Dcmp Hydroxymethylase From T4 (Intact) gi|4389324|pdb|1B5E|A Chain A, Dcmp Hydroxymethylase From T4 gi|4389360|pdb|1B49|A Chain A, Dcmp Hydroxymethylase From T4 (Phosphate-Bound) gi|4389361|pdb|1B49|C Chain C, Dcmp Hydroxymethylase From T4 (Phosphate-Bound) gi|6729700|pdb|1B5D|B Chain B, Dcmp Hydroxymethylase From T4 (Intact) gi|6729701|pdb|1B5E|B Chain B, Dcmp Hydroxymethylase From T4 gi|5354260|gb|AAD42467.1|AF158101_54 gp42 dCMP hydroxymethylase [Enterobacteria phage T4] gi|15312|emb|CAA68342.1| unnamed protein product [Enterobacteria phage T4] gi|215843|gb|AAA21709.1| deoxycytidylate hydroxymethylase [Enterobacteria phage T4] gi|299780399|gb|ADJ39761.1| dCMP hydroxymethylase [Enterobacteria phage T4T] Length = 246 Score = 91.9 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192 D M+ C Q+ + + K++ + RS DV G + A +L +++ + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|169836331|ref|ZP_02869519.1| thymidylate synthase [candidate division TM7 single-cell isolate TM7a] Length = 78 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 44/78 (56%), Positives = 51/78 (65%) Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 IV AWN LPPCH F F V KL+C L QRSGD+ LGIPFN+A YSLLTMM Sbjct: 1 MIVLAWNPGNATISKLPPCHYTFAFNVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMM 60 Query: 188 LASVIGFQYGEFIHTLGD 205 +A G++ GEF HT+ D Sbjct: 61 IAKECGYEAGEFAHTIID 78 >gi|118789|sp|P18030|DCHM_BPT6 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase; Short=Deoxycytidylate hydroxymethylase; AltName: Full=dCMP hydroxymethylase; Short=dCMP HMase Length = 246 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192 D M+ C Q+ + + K++ + RS DV G + A +L +++ + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDPTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|118787|sp|P18029|DCHM_BPT2 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase; Short=Deoxycytidylate hydroxymethylase; AltName: Full=dCMP hydroxymethylase Length = 246 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192 D M+ C Q+ + + K++ + RS DV G + A +L +++ + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|134045244|ref|YP_001096730.1| thymidylate synthase [Methanococcus maripaludis C5] gi|132662869|gb|ABO34515.1| Thymidylate synthase [Methanococcus maripaludis C5] Length = 210 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 75/204 (36%), Gaps = 19/204 (9%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 L+ +++ G++ G + + + + ++V L G Sbjct: 16 LIPKIMEEGTEMVSEDGQKCKELMNTIIEITDPSDKSISEKYPLGERAVESYTEQLLHGS 75 Query: 67 SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126 + ++++ + I++ +DK DQI IV L+ SR Sbjct: 76 A-ATFVYDYHERIFEYPSDKKELKN------------------DQIDYIVNKLKEQINSR 116 Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186 R I WN + + PC + QF + + KL + RS D FL N L Sbjct: 117 RAIAITWNPYIDQTVKDVPCLQIVQFLIRDNKLYQTVLFRSNDAFLAFHANAIGLIALGE 176 Query: 187 MLASVIGFQYGEFIHTLGDVHLYN 210 M+A + + ++ H +H+Y+ Sbjct: 177 MVAEKLEIELAKYTHHSVSMHVYS 200 >gi|297619495|ref|YP_003707600.1| thymidylate synthase, methanogen type [Methanococcus voltae A3] gi|297378472|gb|ADI36627.1| thymidylate synthase, methanogen type [Methanococcus voltae A3] Length = 213 Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 66/179 (36%), Gaps = 7/179 (3%) Query: 38 LSKGFPLLTTKKVHWKSVVHELLWFL---RGDSNVSY-LHRHGVSIWDEWADKDGELGPI 93 LS+G + T K +++ ++ GD + Y L + + + + Sbjct: 21 LSEGIDMTTEDGQKCKEIMNTVIEITDPSNGDVSSKYPLGENAIKSYTNQLVNGCNTEFV 80 Query: 94 YGVQWRSWP---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150 Y R + DQI IV L + SRR I WN + ++ PC Sbjct: 81 YDYHERIFEYPNQDKTEKFDQIDYIVGKLSENHSSRRAIAITWNPYIDTQVKDVPCLQFI 140 Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 +F V N +L + RS D +L N L +A + ++ H +H+Y Sbjct: 141 EFLVRNDELYMTVLFRSNDAYLAFHANALGLIALGQTVAEKLNIPLKKYTHHSVSMHVY 199 >gi|228860976|ref|YP_002853999.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB51] gi|227438650|gb|ACP30962.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB51] Length = 246 Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192 D M+ C Q+ + + K++ + RS DV G + A +L +++ + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSSRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|291290258|dbj|BAI83053.1| dCMP hydroxymethylase [Enterobacteria phage AR1] Length = 246 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192 D M+ C Q+ + + K++ + RS DV G + A +L +++ + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|228861357|ref|YP_002854378.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB14] gi|227438373|gb|ACP30686.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB14] Length = 246 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192 D M+ C Q+ + + K++ + RS DV G + A +L +++ + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|126178499|ref|YP_001046464.1| thymidylate synthase [Methanoculleus marisnigri JR1] gi|125861293|gb|ABN56482.1| thymidylate synthase [Methanoculleus marisnigri JR1] Length = 241 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 46/102 (45%) Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +DQI I + L SRR + WN + + + PC L Q + NGKL ++ RS Sbjct: 103 HVDQIDYIARKLEQAANSRRAVAVTWNPVVDENLDDCPCLQLVQCLLRNGKLQMKVVFRS 162 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 D+ N+ + L M+A +G G + H H+Y Sbjct: 163 NDILSAAGSNMYALVRLQKMIADRLGVPCGRYTHIALVPHIY 204 >gi|116326264|ref|YP_802984.1| dCMP hydroxymethylase [Enterobacteria phage RB32] gi|115343857|gb|ABI94866.1| dCMP hydroxymethylase [Enterobacteria phage RB32] Length = 246 Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSQSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192 D M+ C Q+ + + K++ + RS DV G + A +L +++ + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|330858570|ref|YP_004414945.1| putative dCMP hydroxymethylase [Shigella phage Shfl2] gi|327397504|gb|AEA73006.1| putative dCMP hydroxymethylase [Shigella phage Shfl2] Length = 246 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSQSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192 D M+ C Q+ + + K++ + RS DV G + A +L +++ + Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196 Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217 ++ G I +G +H+Y+ HF D Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226 >gi|288931042|ref|YP_003435102.1| thymidylate synthase [Ferroglobus placidus DSM 10642] gi|288893290|gb|ADC64827.1| thymidylate synthase [Ferroglobus placidus DSM 10642] Length = 424 Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 3/132 (2%) Query: 91 GPIYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 G Y R + + D +DQ+ ++ LR +PY R V V + PPC Sbjct: 285 GEEYTYAERARYCERDEKKVDQLYECIKKLRENPYRRDCYVGISRVWDL-TSDDPPCLRG 343 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 +QF + K Y RS D++ + N+ ++SLLT ++ +I + ++ H D H+Y Sbjct: 344 YQF-LKTRKFMGIFYMRSNDIYGAMHANMYAFSLLTDYVSQLINEREYKYYHFSVDAHIY 402 Query: 210 NNHFEQADLQLS 221 + L Sbjct: 403 EEFLDSVKEILE 414 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 5/122 (4%) Query: 101 WPDYDGNVIDQISSIV----QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN 156 W + + +D++ +++ + L+ PY+RR + W PP F Sbjct: 57 WKACEDSYLDRVENLIQTAAEKLKKTPYTRRVSLPVWRPED-HLCKTPPTVTEISFLYYF 115 Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 L Y RS D N + +A + G + H+Y + Sbjct: 116 DSLHATAYVRSLDALNYFSANFDFVLHVLEEIARKAEMEIGSVALLVAAPHIYKRDTNRV 175 Query: 217 DL 218 + Sbjct: 176 EK 177 >gi|150402548|ref|YP_001329842.1| thymidylate synthase [Methanococcus maripaludis C7] gi|150033578|gb|ABR65691.1| thymidylate synthase [Methanococcus maripaludis C7] Length = 210 Score = 89.6 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 3/141 (2%) Query: 72 LHRHGVSIWDEWADKDGELGPIYGVQWRSWP---DYDGNVIDQISSIVQSLRADPYSRRH 128 L V + E +Y R + D DQI IV L+ SRR Sbjct: 59 LGERAVKSYTEQLLHGSAATFVYDYHERIFEYPNDKKELKNDQIEYIVYKLKEQINSRRA 118 Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 + WN + + PC + QF + + KL + RS D FL N L ++ Sbjct: 119 VAITWNPYIDQTVKDVPCLQIVQFLIRDNKLYQTVLFRSNDAFLAFHANAIGLIALGELV 178 Query: 189 ASVIGFQYGEFIHTLGDVHLY 209 A +G + ++ H +H+Y Sbjct: 179 AEKLGIELVKYTHHSVSMHVY 199 >gi|254410174|ref|ZP_05023954.1| thymidylate synthase, putative [Microcoleus chthonoplastes PCC 7420] gi|196183210|gb|EDX78194.1| thymidylate synthase, putative [Microcoleus chthonoplastes PCC 7420] Length = 421 Score = 89.2 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 14/166 (8%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 + +++ + I D+ ++G + YG + RSW DQI I+ L + + Sbjct: 176 DRAFIQEYIHQILDDAPYREG-VKYTYGQRLRSWF-----GKDQIEQIITKLIGEIDAAS 229 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 ++S W+V + PC V + +LS RS D+++ P N L Sbjct: 230 AVMSLWDVKD-HEQGGSPCLNHLWARVVDHELSLTATLRSNDMYMAWPSNAMGLRALQQY 288 Query: 188 LASVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227 + I + G I H+Y++ +E AD QL R Sbjct: 289 IRDEIAQRSSYDLRMGPLITISQSAHIYDDTWENAD-QLIRKQYPA 333 >gi|282898249|ref|ZP_06306240.1| Thymidylate synthase, putative [Raphidiopsis brookii D9] gi|281196780|gb|EFA71685.1| Thymidylate synthase, putative [Raphidiopsis brookii D9] Length = 513 Score = 89.2 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 63/164 (38%), Gaps = 21/164 (12%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 + SYL + + D+ +++G + YG + RSW DQI ++ L D S R Sbjct: 253 DRSYLPEYISQVLDDAPEQEG-VKYTYGKRLRSWF-----GKDQIQQVIDKLTNDFDSAR 306 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 ++S W+ D PPC + + +LS RS D+F P N L Sbjct: 307 AVMSLWDPEQ-DHHDSPPCLNHIWVRIMDNQLSLTATFRSNDMFSAWPANAMGLRALQKY 365 Query: 188 LASVIG--------------FQYGEFIHTLGDVHLYNNHFEQAD 217 + + Q G I H+Y+ +E A+ Sbjct: 366 IYDRVHNGVDNKTNQDFFGQLQLGPLITISQSAHIYDECWESAE 409 >gi|256810378|ref|YP_003127747.1| thymidylate synthase, methanogen type [Methanocaldococcus fervens AG86] gi|256793578|gb|ACV24247.1| thymidylate synthase, methanogen type [Methanocaldococcus fervens AG86] Length = 222 Score = 89.2 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 70/215 (32%), Gaps = 28/215 (13%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63 + +L+ ++ G G T+ + K KKV K + E Sbjct: 13 FEELIPKILTEGDLVETEFGERTKEIRNTIIEITNPK------LKKVPEKYPLGE----- 61 Query: 64 RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP-DYDGNVIDQISSIVQSLRAD 122 + + ++ + Y R + Y+ I+QI I++ L Sbjct: 62 ------KAVEEYRKNLLYGSKNIF-----SYDYHERLFEYPYNEERINQIDYIIEKLNQQ 110 Query: 123 PYSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 SRR I WN + D+ PC +F V + L + RS D L N Sbjct: 111 KNSRRAIAITWNPKIDIEVSKDERGSVPCLQFIEFLVRDNNLHMTVVFRSNDALLAYVAN 170 Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 L +A Q ++H +H+Y + Sbjct: 171 ALGLISLGEYIAEKTNTQLKSYVHHSVSMHVYIDR 205 >gi|166366992|ref|YP_001659265.1| thymidylate synthase [Microcystis aeruginosa NIES-843] gi|166089365|dbj|BAG04073.1| thymidylate synthase [Microcystis aeruginosa NIES-843] Length = 497 Score = 88.4 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 13/159 (8%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 + ++L + I D+ G + YG + RSW DQI+ ++ L ++ + Sbjct: 253 DRAFLTEYIGQILDDSPIHQG-VKYTYGQRLRSWFGR-----DQIAQVINKLISEIDAAS 306 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 ++S W+V +K PC V +LS RS D+F P N L Sbjct: 307 AVMSLWDVKDHEKGGS-PCLNHIWVRVVENELSLTAIFRSNDMFAAWPANAMGLRALQQH 365 Query: 188 LASVI------GFQYGEFIHTLGDVHLYNNHFEQADLQL 220 + I G I H+Y++ +E + + Sbjct: 366 ICQEINQRSQYNLTLGPLITISQSAHIYDDTWENVERLI 404 >gi|84490025|ref|YP_448257.1| thymidylate synthase [Methanosphaera stadtmanae DSM 3091] gi|84373344|gb|ABC57614.1| ThyA [Methanosphaera stadtmanae DSM 3091] Length = 209 Score = 88.4 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 71/215 (33%), Gaps = 24/215 (11%) Query: 8 LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67 ++ +++ G + D G T+ + + H + ++ Sbjct: 18 VKKIMQEGHEVTDERGSLTKELQNVILEITNPNDNTIPECSPWHDDRL----------ET 67 Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 L D + YG + R + IDQI + ++ L P SRR Sbjct: 68 YKKELLD---------PDNEQGFVYTYGNRLRQYFK-----IDQIDTCIEKLNNCPQSRR 113 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 I + +K+ PC F + + +L + RS D N+ + Sbjct: 114 AIAITIDPIQDNKVDEIPCLQEIAFLIRDNQLYMTDFFRSNDCGGATFPNLFGIREVGYY 173 Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 +A + +H +H+Y + +++ L + Sbjct: 174 VAKNTDTELVNMVHHAMSLHIYEHDWDKCREILRK 208 >gi|32453532|ref|NP_861738.1| RB69ORF048c hypothetical protein [Enterobacteria phage RB69] gi|32350351|gb|AAP75950.1| RB69ORF048c hypothetical protein [Enterobacteria phage RB69] Length = 238 Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 76/220 (34%), Gaps = 14/220 (6%) Query: 9 RHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW--FLRGD 66 R +++ D + D F + + E W + G Sbjct: 24 REILENPEFVTDSRIGRCNEIGSMTVVVDTPSSFKMTDPRINRISYEYAEDFWKFMISGG 83 Query: 67 SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVID-QISSIVQSLRADPYS 125 ++ + ++ + + P + + G I Q+ ++++ L+ P S Sbjct: 84 TDAEEAFKAYPNVAKFISKPKSDALPAN------FNTFYGPRIAAQLPALLKELKEKPNS 137 Query: 126 RRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 RR + + D+ PC +Y+ +GKL + RS + + + + Sbjct: 138 RRVVFQILESSDQALLDSDETLEYPCTDSVTYYIRDGKLYTHCHMRSQNCAVVMQLDFYL 197 Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 L +A+ G + G++ HT+ H++ F+ L Sbjct: 198 QGKLLHYIANECGVEVGDYTHTMVSAHVFERDFDYVKGFL 237 >gi|218246096|ref|YP_002371467.1| thymidylate synthase [Cyanothece sp. PCC 8801] gi|218166574|gb|ACK65311.1| thymidylate synthase [Cyanothece sp. PCC 8801] Length = 497 Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 13/160 (8%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 + S+L + I D+ +G + YG + RSW DQI ++ L + + Sbjct: 253 DRSFLQEYIPQILDDAPYTEG-VKYTYGQRLRSWFKR-----DQIEQVINKLIGEIDAAS 306 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 ++S W+V DK PC V + +LS RS D+F P N L Sbjct: 307 GVMSLWDVNDHDKGGS-PCLNHIWVRVVDNELSLTATLRSNDMFAAWPANAMGLRALQQH 365 Query: 188 LASVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 + I Q G I H+Y++ +E D +S Sbjct: 366 IRDAIAKRSDYNLQMGPLITISQSAHIYDDTWENVDKLIS 405 >gi|15668688|ref|NP_247487.1| thymidylate synthase [Methanocaldococcus jannaschii DSM 2661] gi|3219867|sp|Q57931|TYSY_METJA RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|1591214|gb|AAB98502.1| thymidylate synthase (thyA) [Methanocaldococcus jannaschii DSM 2661] Length = 222 Score = 86.5 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 5/111 (4%) Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSC 161 I+QI I++ L SRR + WN + D+ PC L QF + NGKL Sbjct: 95 EKINQIDYIIEKLNQQKNSRRAVAITWNPKIDIEVSRDERGSVPCLQLVQFLIRNGKLYQ 154 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 + RS D L N L +A +G YG + H +H+Y + Sbjct: 155 TVIFRSNDALLAFVSNAIGLITLGEYIAKKVGVGYGTYTHHAISMHIYVDR 205 >gi|296417111|ref|XP_002838207.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634124|emb|CAZ82398.1| unnamed protein product [Tuber melanosporum] Length = 237 Score = 86.1 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 53/183 (28%) Query: 2 HQYLDLLRHVIKFGSDRRD--------------------------RTGVGTRSTFGYQ-M 34 +QYLDL+ +++ G RRD RT GT S F Q + Sbjct: 52 YQYLDLVYNILTNGERRRDMCSTISYPFYTHPRRKHSLTNPHQLKRTRAGTISLFAPQQL 111 Query: 35 RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK------- 86 RF+L FPLLT K V K+++HE LWF+ G ++ + L GV IW+E + Sbjct: 112 RFNLKNNTFPLLTKKHVFHKAIIHEPLWFVSGSTSNAPLSAVGVKIWEENGSRAYLDSIG 171 Query: 87 -----DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 +G+LGP+Y + R +D RRH ++ + Sbjct: 172 LTERAEGDLGPVYRFRLRH---LGAKYVDCFHHY----------RRHFHPRYHFHHHPQS 218 Query: 142 ALP 144 +P Sbjct: 219 QIP 221 >gi|159028338|emb|CAO87236.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 497 Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 13/159 (8%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 + ++L + I D+ G + YG + RSW DQI+ ++ L ++ + Sbjct: 253 DRAFLTEYIGQILDDSPIHQG-VKYTYGQRLRSWFGR-----DQIAQVINKLISEIDAAS 306 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 ++S W+V +K PC V +LS RS D+F P N L Sbjct: 307 AVMSLWDVKDHEKGGS-PCLNHIWVRVVENELSLTAIFRSNDMFAAWPANAMGLRALQQH 365 Query: 188 LASVI------GFQYGEFIHTLGDVHLYNNHFEQADLQL 220 + I G I H+Y++ +E + + Sbjct: 366 IRDEISKRSEYNLSMGPLITISQSAHIYDDTWENVERLI 404 >gi|298493070|ref|YP_003723247.1| thymidylate synthase ['Nostoc azollae' 0708] gi|298234988|gb|ADI66124.1| thymidylate synthase ['Nostoc azollae' 0708] Length = 497 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 14/161 (8%) Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 +L ++ I D+ +++G + YG + RSW DQI +V L + + ++ Sbjct: 256 FLEQYISQILDDSPNREG-VKYTYGQRLRSWFGR-----DQIEQVVNKLVGEIDAASAVM 309 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190 + W+V D+ PC + + +LS RS D+F P N L + Sbjct: 310 TLWDVKDHDQGGS-PCLNHIWLRIVDNELSLTATLRSNDMFAAWPANAMGLRALQKHIRD 368 Query: 191 VI------GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 I + G I H+Y++ + A QL + Sbjct: 369 EIAKRSEYDLKMGPLITLSQSAHIYDDTWSNA-EQLIQEQY 408 >gi|193211965|ref|YP_001997918.1| thymidylate synthase [Chlorobaculum parvum NCIB 8327] gi|193085442|gb|ACF10718.1| thymidylate synthase [Chlorobaculum parvum NCIB 8327] Length = 343 Score = 83.4 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 88/242 (36%), Gaps = 33/242 (13%) Query: 12 IKFGSDRRDRTGVGTRSTFGYQMR--FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNV 69 IK G R+ R G M + + + ++ + E LW G +++ Sbjct: 21 IKEGVKRKTR-GKLCIELPKPFMFKITNPTARLVTVPERRWNPILPFAESLWLATGKNDL 79 Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV-----------------IDQI 112 ++ H + ++D L YG + R + + + +DQ Sbjct: 80 EFI-GHYLKNMKNFSDDGEFLRGGYGPRLRKYNGINDDYKIRNTYDIDIAKLNKSEVDQF 138 Query: 113 SSIVQSLRADPYSRRHIVSAWNVAL--------IDKMALPPCHCLFQFY--VDNGKLSCQ 162 I +S D ++R+ I++ + + PC L F KL+ Sbjct: 139 GFICKSFEKDKFTRQAIINIGDPPKDCFDKKGNLKITKDFPCTRLLHFQKQPKANKLNLT 198 Query: 163 LYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +Y RS D G NI +++ + + ++ + GE+ H + H Y FE +S Sbjct: 199 VYMRSNDFVWGASAVNIFNFTFMLEYFSQILDLEIGEYYHIANNFHYYEE-FEDLVQSIS 257 Query: 222 RS 223 R+ Sbjct: 258 RT 259 >gi|73748623|ref|YP_307862.1| thymidylate synthase [Dehalococcoides sp. CBDB1] gi|147669382|ref|YP_001214200.1| thymidylate synthase-like protein [Dehalococcoides sp. BAV1] gi|289432648|ref|YP_003462521.1| thymidylate synthase [Dehalococcoides sp. GT] gi|73660339|emb|CAI82946.1| thymidylate synthase [Dehalococcoides sp. CBDB1] gi|146270330|gb|ABQ17322.1| Thymidylate synthase-like protein [Dehalococcoides sp. BAV1] gi|288946368|gb|ADC74065.1| thymidylate synthase, putative [Dehalococcoides sp. GT] Length = 217 Score = 83.4 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 49/108 (45%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 QI+ +++ R ++ + PPC V GKL +Y RS D+ Sbjct: 103 QIAKVIKMYRETGFNTNQAFMTVGNPETLDLEDPPCLRSIDTRVRYGKLHFIIYFRSWDL 162 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 + G P N+A+ LL +A+ IG + GE I +H+Y+ ++ A Sbjct: 163 WAGFPSNLAAIQLLKEYMAAEIGVEDGEIIAMSKGMHIYDYAWDIAKT 210 >gi|270308125|ref|YP_003330183.1| thymidylate synthase [Dehalococcoides sp. VS] gi|270154017|gb|ACZ61855.1| thymidylate synthase [Dehalococcoides sp. VS] Length = 217 Score = 83.0 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 49/108 (45%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 QI+ +++ + ++ + PPC V GKL +Y RS D+ Sbjct: 103 QIAKVIKMYKETGFNTNQAFMTVGNPETLDLEDPPCLRSIDTRVRYGKLHFIIYFRSWDL 162 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 + G P N+A+ +L +A+ IG + GE I +H+Y+ ++ A Sbjct: 163 WAGFPSNLAAIQMLKEYMAAEIGVEDGEIIAMSKGMHIYDYAWDIAKT 210 >gi|66392082|ref|YP_239304.1| putative thymidylate synthase [Xanthomonas phage Xp15] gi|62529192|gb|AAX84875.1| putative thymidylate synthase [Xanthomonas phage Xp15] Length = 273 Score = 83.0 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 83/237 (35%), Gaps = 16/237 (6%) Query: 6 DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRG 65 DL+ G + R G+ R Q+ F +K E+ W L G Sbjct: 13 DLMLRTFTQGFVSKPR-GMEIRELLNAQVTVQTFVPFQCWPDRKYDIGYFKKEMRWKL-G 70 Query: 66 DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYS 125 S + +W+ + DG YG W + +V L D S Sbjct: 71 ASKFDDSIKQHAKMWESVQNPDGTFNSNYGQFWFGQQMG-------VMKVVMELIRDQDS 123 Query: 126 RRHIV-SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184 RR I+ + L + C F++ + L ++ RS D G+ +I ++S+L Sbjct: 124 RRAIIPMLTDDHLSPETVDTVCTEAVSFHIRHNTLYTSVHMRSSDQIFGLGTDIPTFSVL 183 Query: 185 TMML-----ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR-SPRTLPQMIINPN 235 T ++ A+ Q G T H+Y H+ D L +++I P Sbjct: 184 THLVHGLLQANYPSLQVGSMTITAASSHIYERHYRMVDKILDNLEDIPDSEIVILPQ 240 >gi|240276636|gb|EER40147.1| thymidylate synthase [Ajellomyces capsulatus H143] Length = 65 Score = 82.2 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAIL 259 +GD H+Y +H E QL+R P P++II + + ++ E+F + Y+PH I Sbjct: 1 MGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMDGWKEEEFEVVGYKPHKGIK 60 Query: 260 AKVSV 264 K+SV Sbjct: 61 MKMSV 65 >gi|300087783|ref|YP_003758305.1| thymidylate synthase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527516|gb|ADJ25984.1| thymidylate synthase, putative [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 215 Score = 82.2 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 50/108 (46%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 QI+ +++ R + ++ +A PPC V GKL +Y RS D+ Sbjct: 103 QIAEVIRMYREEGFNTNQAFMTVGNPEAISLADPPCLRSVDTRVRYGKLHFVVYFRSWDL 162 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 + G P N+A+ LL +A IG + G+ I +HLY+ +E A Sbjct: 163 WAGFPSNLAALQLLKEYMAGEIGVEDGQIIAISKGLHLYDYSWEIART 210 >gi|289191763|ref|YP_003457704.1| thymidylate synthase, methanogen type [Methanocaldococcus sp. FS406-22] gi|288938213|gb|ADC68968.1| thymidylate synthase, methanogen type [Methanocaldococcus sp. FS406-22] Length = 222 Score = 81.9 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 5/111 (4%) Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSC 161 I+QI+ I++ L SRR + WN + D+ PC L QF + + L Sbjct: 95 EKINQINYIIEKLNQQKNSRRAVAITWNPKIDIDISRDERGSVPCLQLLQFLIRDDNLYM 154 Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 + RS D + N L ++A + E++H +H+Y + Sbjct: 155 TVVFRSNDALIAFVANALGLISLGELVAEKTNTKLKEYVHHSISMHVYIDR 205 >gi|332711138|ref|ZP_08431072.1| thymidylate synthase [Lyngbya majuscula 3L] gi|332350120|gb|EGJ29726.1| thymidylate synthase [Lyngbya majuscula 3L] Length = 502 Score = 81.5 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 69/188 (36%), Gaps = 21/188 (11%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 + ++ + I D+ +G + YG + RSW DQI ++ L + + Sbjct: 257 DRDFIQEYIHQILDDAPVVEG-VKYTYGQRLRSWFGR-----DQIEQVITKLIGEIDAAS 310 Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187 ++S W+V +K PC V + +LS RS D+F N L Sbjct: 311 AVMSLWDVKDHEKGGS-PCLNHIWLRVVDNELSLTATLRSNDMFSAWAANAFGLRALQQY 369 Query: 188 LASV------IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---- 237 + I + G I H+Y++ ++ AD + + L IN Sbjct: 370 VKDQIAKRGGIQLKMGPLITVSQSAHIYDDCYDYADRIIKNQYQKL----INSEQKQYAD 425 Query: 238 DLLSFRYE 245 + +F E Sbjct: 426 SIGNFLIE 433 >gi|254483604|ref|ZP_05096827.1| hypothetical protein GPB2148_2750 [marine gamma proteobacterium HTCC2148] gi|214036113|gb|EEB76797.1| hypothetical protein GPB2148_2750 [marine gamma proteobacterium HTCC2148] Length = 49 Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 21/49 (42%), Positives = 26/49 (53%) Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 QLSR PR LP+M I + + +EDF L Y PH I A V+V Sbjct: 1 MQEQLSREPRALPRMNILRRPDSIYDYCFEDFELVDYNPHGHISAPVAV 49 >gi|327401179|ref|YP_004342018.1| thymidylate synthase [Archaeoglobus veneficus SNP6] gi|327316687|gb|AEA47303.1| thymidylate synthase [Archaeoglobus veneficus SNP6] Length = 431 Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 6/135 (4%) Query: 91 GPIYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 G +Y R + + D +DQ+ ++ LR + R V + PPC Sbjct: 285 GEVYTYAERARYCENDEVKVDQLYMCMEKLREERCRRDCYVGISRPWDL-TSDEPPCLRG 343 Query: 150 FQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205 +Q D +L+ Y RS D++ + N+ +++ LT +A + F + H D Sbjct: 344 YQLVCEIQNDCNRLAGIFYMRSNDIYGAMHANMFAFATLTEYVAELTDFSGCTYYHFAND 403 Query: 206 VHLYNNHFEQADLQL 220 H+Y + L Sbjct: 404 AHIYGEFIDAVKEIL 418 Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 5/121 (4%) Query: 101 WPDYDGNVIDQISSIVQ----SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN 156 W + D++ ++ LRA PY+RR + W PP F N Sbjct: 56 WQICRESYFDRVEGLLDVAAERLRAKPYTRRISIPIWLPKD-HLCETPPAITEVSFLYFN 114 Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 +L+ + RS D + + + ++ G + G + H+Y E+A Sbjct: 115 DRLNVTAFVRSLDALNYFTPDSDFLNYMLEEVSEKSGLEKGSIAMLISCPHIYERDVERA 174 Query: 217 D 217 + Sbjct: 175 E 175 >gi|254516470|ref|ZP_05128529.1| putative thymidylate synthase [gamma proteobacterium NOR5-3] gi|219674893|gb|EED31260.1| putative thymidylate synthase [gamma proteobacterium NOR5-3] Length = 191 Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%) Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163 YD N IDQ +V LR ++ +S L A PC C+ + NGKL+ Q Sbjct: 54 YDMNGIDQFDWMVGRLRNKSETKSAAISLLVPGL--NQANLPCLCVVDSKIRNGKLNLQF 111 Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223 + RS +VF N+ + + L LA+ +G G + H+Y E+A + Sbjct: 112 FFRSQNVFGRQYANLVAIARLQEKLAASVGCDIGILKGYIASAHIYEYDLEEARSLVEGR 171 Query: 224 P 224 P Sbjct: 172 P 172 >gi|169835571|ref|ZP_02868759.1| thymidylate synthase [candidate division TM7 single-cell isolate TM7a] Length = 61 Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261 T+ D H+Y NH E QL+R P L ++ I +ED TL YE + AI + Sbjct: 1 TIIDAHIYENHIEGLKEQLTRKPLKLAKIKIADKP--FNELTFEDITLEDYESYPAIKFE 58 Query: 262 VSV 264 V+V Sbjct: 59 VAV 61 >gi|57234449|ref|YP_181546.1| thymidylate synthase, putative [Dehalococcoides ethenogenes 195] gi|57224897|gb|AAW39954.1| thymidylate synthase, putative [Dehalococcoides ethenogenes 195] Length = 217 Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 49/108 (45%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 QI+ +++ R ++ + PPC + GKL +Y RS D+ Sbjct: 103 QIAKVIKMYRDTGFNTNQAFMTVGNPETLDLEDPPCLRSIDTRIRYGKLHFVIYFRSWDL 162 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 + G P N+A+ +L +A+ IG + GE I +H+Y+ ++ A Sbjct: 163 WAGFPSNLAAIQMLKEYMAAEIGVEDGEIIAMSKGMHIYDYAWDIAKT 210 >gi|301057695|ref|ZP_07198768.1| putative thymidylate synthase [delta proteobacterium NaphS2] gi|300448156|gb|EFK11848.1| putative thymidylate synthase [delta proteobacterium NaphS2] Length = 228 Score = 79.2 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 53/108 (49%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 QI+ +++ R D + ++ PPC + +GKL +Y RS D+ Sbjct: 106 QITEVIRMYREDGFGTNQAYMTVGDPKAIQLVDPPCLRGIDTRIKDGKLHFIVYFRSWDL 165 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218 + G+P N+ + LL +AS IG + GE I + +HLY+ +E A L Sbjct: 166 WNGLPANLGAIQLLKEYMASSIGVEDGEIIASSKGLHLYDYVWELAQL 213 >gi|20094806|ref|NP_614653.1| thymidylate synthase [Methanopyrus kandleri AV19] gi|25091476|sp|Q8TVL9|TYSY_METKA RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase gi|19888018|gb|AAM02583.1| Thymidylate synthase [Methanopyrus kandleri AV19] Length = 209 Score = 79.2 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 48/147 (32%), Gaps = 4/147 (2%) Query: 71 YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130 L H V +++ G Y R +DQ++ IV+ L +RR I Sbjct: 65 PLDEHSVRAYEDQLLDPELRGFEYTYGHR---LRRYFGLDQVTKIVERLSESNNTRRAIA 121 Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGK-LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189 W+ PC Q D G L + RS DV + N+ + L +A Sbjct: 122 VTWDPRRDLDEEEVPCLTALQLQSDGGSGLELHAFYRSWDVGKALVANMIALRRLQEHVA 181 Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQA 216 G + + H+Y Sbjct: 182 ERAGLEPTTLTVYAANAHVYEEDLPDL 208 >gi|258539603|ref|YP_003174102.1| thymidylate synthase [Lactobacillus rhamnosus Lc 705] gi|257151279|emb|CAR90251.1| Thymidylate synthase [Lactobacillus rhamnosus Lc 705] Length = 57 Score = 79.2 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 32/53 (60%), Positives = 37/53 (69%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54 YLDL + V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKKV + Sbjct: 4 QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVTIRP 56 >gi|88603057|ref|YP_503235.1| thymidylate synthase-like protein [Methanospirillum hungatei JF-1] gi|88188519|gb|ABD41516.1| Thymidylate synthase-like protein [Methanospirillum hungatei JF-1] Length = 285 Score = 79.2 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 70/230 (30%), Gaps = 41/230 (17%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61 QY L + + RRD G T+G ++R +++ K + Sbjct: 69 EQYQASLYTI----TPRRD-DGTDAVYTYGNRLRDYPKAEVGIVSKHGGAVKKAI----- 118 Query: 62 FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS-IVQSLR 120 D K G + + D IDQI I+ L Sbjct: 119 -------------------DALFRKLGYVPADACGELIWKGDGRYGGIDQIQESIINRLI 159 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNIA 179 +P SRR I W PPC L Q +D N L+ RS D+ N Sbjct: 160 QNPESRRAISITWFPVQDITADEPPCLQLVQCVIDKNNHLNLICVFRSNDMLSAWGQNAY 219 Query: 180 SYSLLTMMLASVIGFQ---------YGEFIHTLGDVHLYNNHFEQADLQL 220 + L + I + G H+Y H +Q +L L Sbjct: 220 GLAHLQKFICEQINLKRKNAEEKVSQGWLETISISAHMYF-HRDQLELNL 268 >gi|115739464|ref|XP_001198552.1| PREDICTED: similar to GA16493-PA, partial [Strongylocentrotus purpuratus] gi|115969033|ref|XP_001185436.1| PREDICTED: similar to GA16493-PA, partial [Strongylocentrotus purpuratus] Length = 45 Score = 78.4 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 27/45 (60%) Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 L R PR P++ I + ++ F++EDF + Y+P+ I +++V Sbjct: 1 LKRVPRQFPKLNIKRKVTNIDDFKFEDFEIEGYKPYPKITMQMAV 45 >gi|161622540|ref|YP_001595168.1| hypothetical protein EpJS98_gp039 [Enterobacteria phage JS98] gi|238695195|ref|YP_002922388.1| hypothetical protein EpJS10_0039 [Enterobacteria phage JS10] gi|160331891|gb|AAU29230.2| hypothetical protein EpJS98_0039 [Enterobacteria phage JS98] gi|220029331|gb|ACL78265.1| hypothetical protein EpJS10_0039 [Enterobacteria phage JS10] Length = 232 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 63/174 (36%), Gaps = 14/174 (8%) Query: 56 VHELLW--FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG-NVIDQI 112 E W + G ++ + + ++ ++ P + + G ++ Q+ Sbjct: 65 YAESFWKFMISGGTDAAEAFKEYPNVAKFIDKPKSDVLPAN------FNTFYGPRIVAQL 118 Query: 113 SSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 ++++ L+ SRR + D+ PC +Y+ +G+L + RS Sbjct: 119 PALLKELKEKANSRRVVFQILQEQDQALLDSDESLEYPCTDSVTYYIRDGRLYAHTHMRS 178 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 + + + + L +A G G + HT+ H++ F+ L Sbjct: 179 QNCAVVMQLDFYLQGKLMAFIAEQCGVGLGTYSHTMVSAHVFERDFDYVRGFLK 232 >gi|299778996|ref|YP_003734190.1| hypothetical protein EME08_gp040 [Enterobacteria phage IME08] gi|298105725|gb|ADI55369.1| hypothetical protein [Enterobacteria phage IME08] Length = 232 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 64/182 (35%), Gaps = 14/182 (7%) Query: 48 KKVHWKSVVHELLW--FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD 105 + E W + G ++ + + ++ ++ P + + Sbjct: 57 RINRINYDYAESFWKFMISGGTDAAEAFKEYPNVAKFIDKPKSDVLPAN------FNTFY 110 Query: 106 G-NVIDQISSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKL 159 G ++ Q+ ++++ L+ SRR + D+ PC +Y+ +G+L Sbjct: 111 GPRIVAQLPALLKELKEKENSRRVVFQILQEQDQALLDSDESLEYPCTDSVTYYIRDGRL 170 Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219 + RS + + + + L +A G G + HT+ H++ F+ Sbjct: 171 YAHTHMRSQNCAIVMQLDFYLQGKLMAFIAEQCGVGLGTYSHTMVSAHVFERDFDYVRGF 230 Query: 220 LS 221 L Sbjct: 231 LK 232 >gi|311992830|ref|YP_004009697.1| hypothetical protein Acj61p080 [Acinetobacter phage Acj61] gi|295815119|gb|ADG36045.1| conserved hypothetical phage protein [Acinetobacter phage Acj61] Length = 237 Score = 76.5 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 14/191 (7%) Query: 38 LSKGFPLLTTKKVHWKSVVHELLW--FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYG 95 +G K E W + G ++ + ++ A E P Sbjct: 49 PEEGATFGNKKINRIDYNYAEKFWEFMIAGGTDAEQAFKEYPNVAKFLAKPKTESLPAN- 107 Query: 96 VQWRSWPDYDGNVID-QISSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCL 149 + + G I Q+ ++++ L+ SRR + D+ PC Sbjct: 108 -----FNTFYGPRIAAQMPALIKELKEKENSRRVVFQILQEQDQVLLDADETLEYPCTDS 162 Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209 FY+ G+L + RS + + + + +A G + G + H++ H++ Sbjct: 163 VTFYIREGRLYAHTHMRSQNCAVVMQLDFYLMQKFMQHIADKCGVELGTYSHSIVSAHVF 222 Query: 210 NNHFEQADLQL 220 E L Sbjct: 223 ERDLEYVKTFL 233 >gi|21700319|gb|AAM75819.1|AF485373_1 thymidylate synthase [Mastigamoeba balamuthi] Length = 65 Score = 76.5 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 8/65 (12%) Query: 91 GPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 GP+YG QWR + DY G IDQ+ ++++ +R DP SRR I+SAWN ++KMA Sbjct: 1 GPVYGFQWRHFGAEYTNMNADYAGKGIDQLKNVIEMIRHDPSSRRIIMSAWNPLDLEKMA 60 Query: 143 LPPCH 147 LPPCH Sbjct: 61 LPPCH 65 >gi|33304370|gb|AAQ02614.1| thymidylate synthase [Hartmannella cantabrigiensis] Length = 65 Score = 76.5 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 8/65 (12%) Query: 91 GPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142 GP+YG QWR + DY G +DQ+ ++ L+ +P RR ++SAWN A +D+MA Sbjct: 1 GPVYGFQWRHFGAKYVDMHTDYTGQGVDQLKDVIHKLKTNPNDRRIVMSAWNPADLDQMA 60 Query: 143 LPPCH 147 LPPCH Sbjct: 61 LPPCH 65 >gi|308273673|emb|CBX30275.1| hypothetical protein N47_D30840 [uncultured Desulfobacterium sp.] Length = 220 Score = 76.1 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 50/115 (43%) Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170 QI ++Q + D + + PPC + GKL +Y RS D+ Sbjct: 106 QIKEVIQMYKNDGHGTNQAYMTVGDPSTIYLGDPPCLRGIDTRIRYGKLHFMVYFRSWDL 165 Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225 + G P N+ + LL ++ IG Q GE I +HLY+ +E A L+ R+ Sbjct: 166 WNGFPANLGAIQLLKEYMSLEIGVQDGEIIAASKGLHLYDYIWELAKLRTLRTEY 220 >gi|119719856|ref|YP_920351.1| thymidylate synthase-like [Thermofilum pendens Hrk 5] gi|119524976|gb|ABL78348.1| Thymidylate synthase-like protein [Thermofilum pendens Hrk 5] Length = 460 Score = 75.7 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 8/136 (5%) Query: 87 DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146 +GE G +Y R + DQ+ IV+ L + P +RR I W+ A PPC Sbjct: 233 EGEEGAVYSYGDRLRRHREAG--DQVRRIVERLASSPDTRRAIALTWDFATDTNSQDPPC 290 Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG------FQYGEFI 200 Q + + + RS D + P N L +A + + G + Sbjct: 291 LVAVQGDLSGDTYNQVAFFRSHDAYAAWPLNAYGLLALMRRVAGELSERTGRAVKPGWLV 350 Query: 201 HTLGDVHLYNNHFEQA 216 +H+Y + + +A Sbjct: 351 VYSSSLHVYEHDWGRA 366 >gi|300869012|ref|ZP_07113615.1| hypothetical protein OSCI_3890023 [Oscillatoria sp. PCC 6506] gi|300332992|emb|CBN58807.1| hypothetical protein OSCI_3890023 [Oscillatoria sp. PCC 6506] Length = 354 Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 6/159 (3%) Query: 51 HWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVID 110 + V + + L G + + + + D + R + G ID Sbjct: 77 NPSLAVAKFFYLLSGSNQIEDIAFYSNGARRYTDDG---IIMPGAHGSRIFYPVVG--ID 131 Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALI-DKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 Q + +R S+R ++ + K PC F NGKL Y R+ D Sbjct: 132 QFEASAHLIREKKSSKRVTLAIYQPNDCGRKSQDIPCIVSIIFSPRNGKLHTTAYMRAND 191 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 V+ + +++ ++L +A+ + G + H + +HL Sbjct: 192 VYRILCYDLFELTMLAEFMAAYTDIELGYYYHIVTSMHL 230 >gi|553026|gb|AAA88467.1| dCMP hydroxymethylase [Enterobacteria phage T4] Length = 186 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 61/165 (36%), Gaps = 15/165 (9%) Query: 20 DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79 D+TGV T G D F L + + EL W+ V + I Sbjct: 27 DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81 Query: 80 WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137 W + A GE+ YG W + + Q + L +P SRR I+ ++ Sbjct: 82 WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136 Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D M+ C Q+ + + K++ + RS DV G + A Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINALVNMRSNDVVFGFRNDYA 181 >gi|325958738|ref|YP_004290204.1| thymidylate synthase [Methanobacterium sp. AL-21] gi|325330170|gb|ADZ09232.1| thymidylate synthase, methanogen type [Methanobacterium sp. AL-21] Length = 215 Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 43/107 (40%) Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169 DQI S++ L+ + +RR +++ ++ ++ P + + ++ RS D Sbjct: 104 DQIESVLVRLKRNSTTRRAVITIFDPSIDHYKDNVPSLVMIDIIIRKNRIYLTAVCRSVD 163 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216 + N + L L++ + + G H+Y +++ Sbjct: 164 YYGSWIQNFFALRGLLKYLSNHLKVKMGPITIHSVSAHVYKRNYKDV 210 >gi|311992571|ref|YP_004009439.1| putative thymidylate synthase [Acinetobacter phage Ac42] gi|298684354|gb|ADI96315.1| putative thymidylate synthase [Acinetobacter phage Ac42] Length = 235 Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 77/230 (33%), Gaps = 21/230 (9%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV-HWKSVVHEL 59 ++QY V++ D + L + + + ++ E Sbjct: 17 LNQY------VVENYEFETDSRIGKCLEVGSILVEVALPEKGAVFSDSRISRIDYDYAEK 70 Query: 60 LW--FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG-NVIDQISSIV 116 W ++G ++ + S+ A E P + + G ++ Q+ +++ Sbjct: 71 FWEFMIQGGTDAEEAFKDYASVAKFIAKPKSENLPSN------FNTFYGPRIVAQMPALL 124 Query: 117 QSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 + LR SRR + D+ PC FY+ N +L + RS + Sbjct: 125 KELREKENSRRVVFQILQEQDQVLLDSDETLEYPCTDSITFYIRNNQLFMHTHMRSQNCA 184 Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 + + + M +A +G G + H++ H++ + L Sbjct: 185 VVMQLDFYLMQRFMMYMAEQLGISVGTYSHSIVSAHVFERDLDYVKTFLE 234 >gi|311993361|ref|YP_004010226.1| gp42 dCMP hydroxymethylase [Acinetobacter phage Acj9] gi|295917318|gb|ADG59989.1| gp42 dCMP hydroxymethylase [Acinetobacter phage Acj9] Length = 234 Score = 72.6 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 15/174 (8%) Query: 56 VHELLW--FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG-NVIDQI 112 E W + G ++ + ++ P ++ + G ++ Q+ Sbjct: 67 YAEKFWEFMISGGTDAKEAFKEYPNVAKFIDK------PKSSELPENFNTFYGPRIVAQL 120 Query: 113 SSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167 +I++ L P SRR ++ ++ PC F V + +L+ + RS Sbjct: 121 PAILKEL-EKPNSRRAVIQILQEQDQVLLDANETLEYPCTDSITFSVRDDRLNMHTHMRS 179 Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 +V + + L +A + + + HT+ H+Y E L+ Sbjct: 180 QNVATVMQLDFFLMHKLFAYVADKLDLEMDTYTHTIVSAHIYERDVEYVRGFLN 233 >gi|328462354|gb|EGF34424.1| thymidylate synthase [Lactobacillus rhamnosus MTCC 5462] Length = 59 Score = 71.5 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 29/45 (64%), Positives = 34/45 (75%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51 +L+ V+ G + DRT GT S FG+QMRFDLSKGFPLLTTKK H Sbjct: 2 ILQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKYH 46 >gi|32396172|gb|AAP42245.1| thymidylate synthase [Baboon gamma-herpesvirus] Length = 63 Score = 71.5 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 36/55 (65%) Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157 DY+G +DQ+ +V + PY RR ++ AWN A + +MALPPCH L QFYV G Sbjct: 9 DYEGQGVDQLRYVVDLIARRPYDRRIVMCAWNPADLAQMALPPCHVLCQFYVARG 63 >gi|218781981|ref|YP_002433299.1| thymidylate synthase-like protein [Desulfatibacillum alkenivorans AK-01] gi|218763365|gb|ACL05831.1| thymidylate synthase-like protein [Desulfatibacillum alkenivorans AK-01] Length = 263 Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 1/144 (0%) Query: 81 DEWADKDGELGPIYGVQWRSWPDYDGN-VIDQISSIVQSLRADPYSRRHIVSAWNVALID 139 D W ++ E+ + + DG ++QI I+Q+ + + +V Sbjct: 120 DWWQAQNKEIIDFREPDGKVVYEKDGQLYLNQIEWIIQTYKNFGHRNNQMVLQVAHPSDL 179 Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199 + PPC + +G L +Y RS D++ G+P N+A L +A+ IG + GE Sbjct: 180 TLLDPPCLRSIDTRIQDGTLHFFVYFRSWDLWGGLPANLAGIQNLKEYMANEIGVKDGEM 239 Query: 200 IHTLGDVHLYNNHFEQADLQLSRS 223 + +HLY + A L+ R Sbjct: 240 VVESKGLHLYGYAEDLAKLRCLRD 263 >gi|26984051|gb|AAN85116.1| Orf105 [Citrobacter freundii] gi|60280767|gb|AAX18271.1| thymidylate synthase-like protein [Escherichia coli] gi|60280779|gb|AAX18282.1| thymidylate synthase-like protein [Escherichia coli] gi|225730221|gb|ACO24932.1| thymidylate synthase-like protein [Escherichia coli] Length = 105 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 28/53 (52%), Positives = 35/53 (66%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWK 53 M Y DLLR VI G+D DRTGVGT S +G ++F+L +GFP T K + WK Sbjct: 1 MDNYKDLLREVIITGTDSVDRTGVGTVSIWGAMLKFNLQEGFPATTCKGLAWK 53 >gi|182413146|ref|YP_001818212.1| thymidylate synthase-like protein [Opitutus terrae PB90-1] gi|177840360|gb|ACB74612.1| Thymidylate synthase-like protein [Opitutus terrae PB90-1] Length = 295 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 18/173 (10%) Query: 69 VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY---DGNVIDQISSIVQSLRADPYS 125 V ++ + W+ G L Q G ++QI +++ L P++ Sbjct: 88 VKNMNDPKDTRWEYTY--HGRLAAYGTWQESRDGQPVRVGGFNVNQIEAVIAKLVKQPFT 145 Query: 126 RRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVFLGIPFNIAS 180 R+ + W + + PPC + + L+C + RS D + N+ Sbjct: 146 RQAQMITWMPNIDLECYDPPCLQSLWYRLMEDDDGVSWLNCNVRFRSNDAWGASFMNMFG 205 Query: 181 YS-----LLTMMLASVIG--FQYGEFIHTLGDVHLYNNHFEQADLQL-SRSPR 225 + ++ +A G + G H+Y +A +L R PR Sbjct: 206 FVIFNRDVIAAEIARRTGKTIKLGRLNWQADSYHIYGKDIAEAKARLFDRIPR 258 >gi|225730207|gb|ACO24919.1| thymidylate synthase-like protein [Enterobacter aerogenes] Length = 105 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 28/53 (52%), Positives = 35/53 (66%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWK 53 M Y DLLR VI G+D DRTGVGT S +G ++F+L +GFP T K + WK Sbjct: 1 MDNYKDLLREVIITGADSVDRTGVGTVSIWGAMLKFNLQEGFPATTCKGLAWK 53 >gi|152002540|dbj|BAF73564.1| thymidylate synthase [Onion yellows phytoplasma OY-W] Length = 44 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 24/42 (57%), Positives = 31/42 (73%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF 42 M+ YLDL R +++ GS R DRT G +S FGYQMRF+L +GF Sbjct: 1 MNTYLDLCRFILQKGSFRNDRTNTGNKSVFGYQMRFNLEEGF 42 >gi|222444774|ref|ZP_03607289.1| hypothetical protein METSMIALI_00387 [Methanobrevibacter smithii DSM 2375] gi|261350653|ref|ZP_05976070.1| putative thymidylate synthase, methanogen type [Methanobrevibacter smithii DSM 2374] gi|222434339|gb|EEE41504.1| hypothetical protein METSMIALI_00387 [Methanobrevibacter smithii DSM 2375] gi|288861435|gb|EFC93733.1| putative thymidylate synthase, methanogen type [Methanobrevibacter smithii DSM 2374] Length = 232 Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 80/227 (35%), Gaps = 16/227 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTT-KKVHWKSVVHELLWF 62 YLD ++ ++ G + + + + G D + + + +++E+ Sbjct: 8 YLDFVKKILNQGKETYKDSNHHLKESLGNFYVIDDPLNLKFVAKYQHMTTDMMLNEIK-- 65 Query: 63 LRGDSNVS--YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 G ++ + + + + + + G +Y R +D +DQ + + + Sbjct: 66 -SGKYDIEGCPIKSDALYEYVKSFENSDDQGFVYTYPNRILAHFD---VDQFEVMKKRML 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S R + ++ L PC Q V N +L+ RS D+F N+ Sbjct: 122 HAIGSNRAVAVTYDPKLDQDREDIPCLQFLQCIVRNNELTIHCLFRSNDIFGAFYSNMFF 181 Query: 181 YSLLTMMLASVIGFQY-------GEFIHTLGDVHLYNNHFEQADLQL 220 + + + + + + G + H+Y+N + A + Sbjct: 182 IAYIGIKMKEELNKELLGEKVNFGGIHYHSTSGHIYSNDMKAAKKLI 228 >gi|148643794|ref|YP_001274307.1| thymidylate synthase, ThyA [Methanobrevibacter smithii ATCC 35061] gi|148552811|gb|ABQ87939.1| predicted thymidylate synthase, ThyA [Methanobrevibacter smithii ATCC 35061] Length = 232 Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 80/227 (35%), Gaps = 16/227 (7%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTT-KKVHWKSVVHELLWF 62 YLD ++ ++ G + + + + G D + + + +++E+ Sbjct: 8 YLDFVKKILNQGKETYKDSNHHLKESLGNFYVIDDPLNLKFVAKYQHMTTDMMLNEIK-- 65 Query: 63 LRGDSNVS--YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120 G ++ + + + + + + G +Y R +D +DQ + + + Sbjct: 66 -SGKYDIEGCPIKSDALYEYVKSFENSDDQGFVYTYPNRILAHFD---VDQFEVMKKRML 121 Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180 S R + ++ L PC Q V N +L+ RS D+F N+ Sbjct: 122 HAIGSNRAVAVTYDPKLDQDREDIPCLQFLQCIVRNNELTIHCLFRSNDIFGAFYSNMFF 181 Query: 181 YSLLTMMLASVIGFQY-------GEFIHTLGDVHLYNNHFEQADLQL 220 + + + + + + G + H+Y+N + A + Sbjct: 182 ITYIGIKMKEELNKELLGEKVNFGGIHYHSTSGHIYSNDMKAAKKLI 228 >gi|7670721|gb|AAF66223.1| thymidylate synthase [Felis catus] Length = 45 Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 33/45 (73%), Positives = 39/45 (86%) Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 LSCQLYQRSGD+ LG+PFNIASYSLLT M+A + G + G+FIHTL Sbjct: 1 LSCQLYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFIHTL 45 >gi|6644121|gb|AAF20914.1| thymidylate synthase [Equus caballus] Length = 44 Score = 66.1 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 30/44 (68%), Positives = 38/44 (86%) Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202 LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HT Sbjct: 1 LSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHT 44 >gi|148927227|ref|ZP_01810800.1| Thymidylate synthase-like protein [candidate division TM7 genomosp. GTL1] gi|147887358|gb|EDK72809.1| Thymidylate synthase-like protein [candidate division TM7 genomosp. GTL1] Length = 208 Score = 65.3 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 48/127 (37%) Query: 93 IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152 I+ + QI ++ L +S W+ + + PC + Sbjct: 78 IHDWTKLYYHRAFDEPNSQIEFLISKLDPQSPKGEAQISMWDKNIDQDQKVSPCTQIIWA 137 Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212 + +GKL ++ S DV+ + NI + L +A +G G++ H L HL+ Sbjct: 138 RIKHGKLELHVHAHSSDVYKKLLMNILEFVSLQHYIAERVGVPVGKYYHFLDSGHLHQKD 197 Query: 213 FEQADLQ 219 + ++ Sbjct: 198 IKAIEVL 204 >gi|288561361|ref|YP_003424847.1| thymidylate synthase ThyA [Methanobrevibacter ruminantium M1] gi|288544071|gb|ADC47955.1| thymidylate synthase ThyA [Methanobrevibacter ruminantium M1] Length = 236 Score = 65.3 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 78/231 (33%), Gaps = 22/231 (9%) Query: 4 YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELLWF 62 YL+ + ++K G + + + G D + + + ++ E+ Sbjct: 8 YLEFVNKILKEGKETYKDSDHHLKEYLGNYYYIDDPLDLKFRAKYQHMTPELMLEEIK-- 65 Query: 63 LRGDSNVSYLHRHGVSIWD-----EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117 +G ++ G ++++ E D G + + +DQ + + Sbjct: 66 -KGRYDIDACPIKGDALYEYVKSFEIRDDQGFVYTYPNRILEHF------GVDQFEVMKE 118 Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177 + S R + ++ L PC Q V +G+L+ + RS D+F N Sbjct: 119 RILTATGSNRAVAVTYDPKLDHDREDIPCLQFVQMLVRDGELTIHVIFRSNDIFGAFYSN 178 Query: 178 IASYSLLTMMLASVIGFQY-------GEFIHTLGDVHLYNNHFEQADLQLS 221 + + + + + + G + H+YNN A +S Sbjct: 179 MFFICYMGIKMKEEVNKEIMGEKLNFGGIHYHSTSGHIYNNDMRAARKLIS 229 >gi|7670725|gb|AAF66224.1| thymidylate synthase [Bos taurus] Length = 45 Score = 65.3 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 30/45 (66%), Positives = 38/45 (84%) Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203 LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + + G+F+HTL Sbjct: 1 LSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTL 45 >gi|147921548|ref|YP_684635.1| putative thymidylate synthase [uncultured methanogenic archaeon RC-I] gi|110620031|emb|CAJ35309.1| putative thymidylate synthase [uncultured methanogenic archaeon RC-I] Length = 217 Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 9/151 (5%) Query: 77 VSIWDEWADKD--GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP-YSRRHIVSAW 133 V + E ++ G+ G Y R + DQ+ + + L+ S+R W Sbjct: 70 VKYYVEQFKRESAGKHGFEYTYIDR---MVNYEGFDQLKWMAEQLKNKRYDSKRVQAITW 126 Query: 134 NV-ALIDKMALPPCHCLFQFY-VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM-MLAS 190 K PC Y N L ++ RS D+F N+ ++ L L Sbjct: 127 IPRVDCAKKEDQPCFQRIWVYPYQNDTLDVHIHYRSWDMFKAFEANLMAFQELVKDELTG 186 Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 GF G+ +VH+Y + F+ + L Sbjct: 187 PSGFTLGKLRCFGDNVHIYEDDFQAVEAVLK 217 >gi|297729145|ref|NP_001176936.1| Os12g0446900 [Oryza sativa Japonica Group] gi|255670280|dbj|BAH95664.1| Os12g0446900 [Oryza sativa Japonica Group] Length = 89 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 31/44 (70%), Positives = 38/44 (86%) Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 +FYV+NG+LSCQ+YQRS D+ LG+PFNIASYSLLT M+A V G Sbjct: 32 KFYVENGELSCQMYQRSADMGLGVPFNIASYSLLTCMIAQVCGM 75 Score = 40.6 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 19/29 (65%) Query: 48 KKVHWKSVVHELLWFLRGDSNVSYLHRHG 76 ++V W+ V+ ELLWF+ G +N + +G Sbjct: 10 QRVFWRGVLEELLWFISGSTNAKFYVENG 38 >gi|282858321|ref|ZP_06267503.1| conserved domain protein [Prevotella bivia JCVIHMP010] gi|282588902|gb|EFB94025.1| conserved domain protein [Prevotella bivia JCVIHMP010] Length = 104 Score = 63.8 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 1/83 (1%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60 M++Y +L ++K G + ++ G Q+ + + + + K + +EL Sbjct: 1 MNKYYQILDKILKQGKIQDNKKG-NIHYLLNEQLSLLPADLLDIFESHGIARKKLKNELQ 59 Query: 61 WFLRGDSNVSYLHRHGVSIWDEW 83 F++G+ NV G++ WD Sbjct: 60 LFMQGERNVERYREAGINWWDYC 82 >gi|158521756|ref|YP_001529626.1| thymidylate synthase-like protein [Desulfococcus oleovorans Hxd3] gi|158510582|gb|ABW67549.1| thymidylate synthase-like protein [Desulfococcus oleovorans Hxd3] Length = 263 Score = 63.4 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 4/141 (2%) Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA-DPYSRRH 128 + L+ ++ W E A + + G + + I+QI ++ + + + + Sbjct: 112 APLYGDKLAWWHENASEIVDRREPDGKIV--FEEDGRLYINQIEWVIDTYKRFGARNNQM 169 Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188 ++ + + + PPC + + +L +Y RS D++ G+P N+A L + Sbjct: 170 VLQVAEPSDLALLD-PPCLRSIDTRIQDDQLIFFVYFRSWDLWGGLPANLAGIQNLKEYM 228 Query: 189 ASVIGFQYGEFIHTLGDVHLY 209 A IG G I +HLY Sbjct: 229 AGEIGVADGPMIVESKGLHLY 249 >gi|167948528|ref|ZP_02535602.1| thymidylate synthase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 31 Score = 63.0 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 17/31 (54%), Positives = 21/31 (67%) Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 P + DL +FRYEDF L Y+PH I A V+V Sbjct: 1 PEVRDLFAFRYEDFELLDYDPHPHIKAPVAV 31 >gi|152002543|dbj|BAF73567.1| thymidylate synthase [Onion yellows phytoplasma OY-W] Length = 58 Score = 62.6 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 30/45 (66%), Positives = 36/45 (80%) Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172 I+++WN L+++MALPPCH L QFYV GKLS QLYQRSGDVF Sbjct: 1 MILNSWNPPLLNQMALPPCHVLIQFYVHQGKLSLQLYQRSGDVFW 45 >gi|297611836|ref|NP_001067911.2| Os11g0484400 [Oryza sativa Japonica Group] gi|255680095|dbj|BAF28274.2| Os11g0484400 [Oryza sativa Japonica Group] Length = 77 Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 32/47 (68%), Positives = 39/47 (82%) Query: 148 CLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194 FQFYV++G+LSCQ+YQRS D+ LG+PFNIASYSLLT M+A V G Sbjct: 17 FFFQFYVESGELSCQMYQRSADMGLGVPFNIASYSLLTYMIAHVCGM 63 >gi|2160415|dbj|BAA00404.1| thymidylate synthase [Homo sapiens] Length = 68 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 17/37 (45%), Positives = 24/37 (64%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS 39 QYL ++H+++ G + DRTG GT S FG Q R+ L Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLR 68 >gi|328954285|ref|YP_004371619.1| hypothetical protein Desac_2621 [Desulfobacca acetoxidans DSM 11109] gi|328454609|gb|AEB10438.1| hypothetical protein Desac_2621 [Desulfobacca acetoxidans DSM 11109] Length = 491 Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 7/152 (4%) Query: 108 VIDQISSIVQSLRADPYSRRHIVSAW-NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166 D + + ++ LRADP R+ ++ W N + PC F + KL+ R Sbjct: 293 GADNLKACLERLRADPEDRKAYLTLWDNNRDLINPKGQPCFVSSFFRRFDEKLTLTATFR 352 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR- 225 + + N+ L +A +G G + + ++A + R P Sbjct: 353 THNALDAWLPNVYGLMALQQWVALRLGMPIGPITVVSHSISIDRKELDRALAVVGRRPFG 412 Query: 226 ----TLPQMIINPNIVDLL-SFRYEDFTLRSY 252 I+ + ++L RY D TL+ Y Sbjct: 413 IREDPCGYFRISLDEGEILVEHRYGDVTLKEY 444 >gi|282163879|ref|YP_003356264.1| thymidylate synthase [Methanocella paludicola SANAE] gi|282156193|dbj|BAI61281.1| thymidylate synthase [Methanocella paludicola SANAE] Length = 212 Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 7/138 (5%) Query: 88 GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY-SRRHIVSAWNVALID-KMALPP 145 G G Y R + DQ+ + + L+ Y S+R W + K P Sbjct: 77 GRHGFEYTYIDR---LVNYEGFDQLKWMGEQLQNKRYESKRIQAITWMPKIDCMKKEDQP 133 Query: 146 CHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTM-MLASVIGFQYGEFIHTL 203 C + N KL ++ RS D+F N+ ++ L L F G Sbjct: 134 CFQRIWVFPHKNNKLDVHIHYRSWDMFKAFEANLMAFQELVKDELIGPTDFMLGTLRCFG 193 Query: 204 GDVHLYNNHFEQADLQLS 221 +VH+Y + F+ A+ L Sbjct: 194 DNVHIYEDDFQAAEEVLK 211 >gi|108863585|gb|ABG22167.1| DHFR-TS [Haemoproteus lanii] Length = 73 Score = 60.3 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + DY +DQ+ +++ ++ DP SRR I+ AWN Sbjct: 11 EVNDLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPTSRRIILCAWNPKD 70 Query: 138 IDK 140 ++K Sbjct: 71 LEK 73 >gi|77407171|ref|ZP_00784156.1| thymidylate synthase [Streptococcus agalactiae H36B] gi|77174220|gb|EAO77104.1| thymidylate synthase [Streptococcus agalactiae H36B] Length = 134 Score = 60.3 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 19/129 (14%) Query: 6 DLLRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57 D + ++ G + ++ G +DLSKG FP+ T + + KS + Sbjct: 10 DNITKIMSEGVFSEQARPRYKNGEMANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIK 69 Query: 58 ELLWFLRGDSN--VSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISS 114 E+ W + +N V ++GV+ W++W G +G YG + + IS Sbjct: 70 EIFWIYQDQTNDLVVLNDKYGVTYWNDWEVGHTGTIGQRYGAVVKKH--------NIISK 121 Query: 115 IVQSLRADP 123 +++ L +P Sbjct: 122 LLKQLEDNP 130 >gi|49247552|gb|AAT58678.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. GRW2] Length = 78 Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + +YD +DQ+ +I+ ++ DP SRR ++ AWNV Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMYDNYDNKGVDQVKNIIDLIKNDPNSRRILLCAWNVKD 75 Query: 138 IDK 140 +DK Sbjct: 76 LDK 78 >gi|49247544|gb|AAT58674.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus majoris] Length = 78 Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + DY +DQ+ +++ ++ DP +RR I+ AWN Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKNDPKNRRIILCAWNPKD 75 Query: 138 IDK 140 ++K Sbjct: 76 LEK 78 >gi|271962366|ref|YP_003336562.1| hypothetical protein Sros_0805 [Streptosporangium roseum DSM 43021] gi|270505541|gb|ACZ83819.1| hypothetical protein Sros_0805 [Streptosporangium roseum DSM 43021] Length = 238 Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 70/224 (31%), Gaps = 36/224 (16%) Query: 7 LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66 L+RHV G D G P++ + V ++ + L W Sbjct: 17 LMRHVRTNGRAAEDDRG-------------------PIIEAQAVLFE--IAGLGW----- 50 Query: 67 SNVSYLHRHG----VSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122 + L +G + ++ + + P G +DQ+ + LRA Sbjct: 51 -DDPILESYGDSGKIPLYAGKFSECAIIPPFKYSYGGRLRRLLG--VDQLHWVADVLRAK 107 Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182 PY++ +S PC F + +G+L RS +VF N Sbjct: 108 PYTKSGWISLTVPGESPDA--VPCLTSLAFRLRDGRLVMTAAFRSQNVFTSY-LNYVPLR 164 Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 + +A +G G + H+Y L S R Sbjct: 165 SIQNEVAGDLGVGCGSMRVFVDVPHIYVADAAAVGEILRLSERD 208 >gi|123490938|ref|XP_001325718.1| hypothetical protein [Trichomonas vaginalis G3] gi|121908622|gb|EAY13495.1| hypothetical protein TVAG_343240 [Trichomonas vaginalis G3] Length = 478 Score = 59.5 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 2/107 (1%) Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171 + + V+ L+ DP +R+ +S W + PPC F + +L + RS D F Sbjct: 280 LDATVKKLQTDPVTRQAHISLWLDQDV-SSPNPPCLTDIDFNLQKNRLFMTCHFRSHDAF 338 Query: 172 LGIPFNIASYSLLTMMLASVI-GFQYGEFIHTLGDVHLYNNHFEQAD 217 + N+ L + S + G + G + H+Y + Sbjct: 339 AALRSNMYGLVKLQEKVISQLPGVREGPLVLMANSSHIYERDIDTIK 385 >gi|49247528|gb|AAT58666.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. GRW1] gi|49247530|gb|AAT58667.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. GRW8] gi|49247532|gb|AAT58668.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. BRW1] gi|49247534|gb|AAT58669.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. GRW5] Length = 78 Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + DY IDQ+ +++ ++ DP +RR I+ AWN Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGIDQLKNVINLIKTDPTNRRIILCAWNPKD 75 Query: 138 IDK 140 +DK Sbjct: 76 LDK 78 >gi|108863583|gb|ABG22166.1| DHFR-TS [Haemoproteus lanii] Length = 73 Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + DY +DQ+ +++ ++ DP SRR I+ AWN Sbjct: 11 EVNDLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPISRRIILCAWNPKD 70 Query: 138 IDK 140 ++K Sbjct: 71 LEK 73 >gi|110006193|gb|ABG48599.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PA] Length = 78 Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 8/66 (12%) Query: 83 WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 + + +LGPIYG QWR + +Y+ IDQ+ +I+ ++ DP SRR I+ AWN Sbjct: 13 FHREVNDLGPIYGFQWRHFGAEYSDMYDNYENKGIDQLKNIINLIKNDPTSRRIILCAWN 72 Query: 135 VALIDK 140 V +DK Sbjct: 73 VKDLDK 78 >gi|291457829|ref|ZP_06597219.1| thymidylate synthase [Bifidobacterium breve DSM 20213] gi|291380554|gb|EFE88072.1| thymidylate synthase [Bifidobacterium breve DSM 20213] Length = 41 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 24/37 (64%) Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149 ++ ++ +P RR I+SAWN + + KMALPPCH Sbjct: 1 MDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMC 37 >gi|49247538|gb|AAT58671.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT16] gi|49247540|gb|AAT58672.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT7] Length = 73 Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + DY +DQ+ +++ L+ DP +RR I+ AWN Sbjct: 11 EVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVINLLKTDPTNRRIILCAWNPKD 70 Query: 138 IDK 140 ++K Sbjct: 71 LEK 73 >gi|49247536|gb|AAT58670.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT2] gi|49247542|gb|AAT58673.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT1] gi|86795021|gb|ABD15365.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT13] gi|86795023|gb|ABD15366.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT10] Length = 73 Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + DY +DQ+ +++ ++ DP +RR I+ AWN Sbjct: 11 EVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVINLIKTDPTNRRIILCAWNPKD 70 Query: 138 IDK 140 ++K Sbjct: 71 LEK 73 >gi|110006229|gb|ABG48617.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT] gi|110006231|gb|ABG48618.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU] gi|112293883|gb|ABI15067.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT] gi|112293885|gb|ABI15068.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT] gi|112293887|gb|ABI15069.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU] gi|112293889|gb|ABI15070.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU] Length = 78 Score = 58.4 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+SAWNV Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILSAWNVKD 75 Query: 138 IDK 140 +DK Sbjct: 76 LDK 78 >gi|110006195|gb|ABG48600.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|110006197|gb|ABG48601.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PC] gi|112293821|gb|ABI15036.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293823|gb|ABI15037.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293825|gb|ABI15038.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293827|gb|ABI15039.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293829|gb|ABI15040.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293831|gb|ABI15041.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293833|gb|ABI15042.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] gi|112293835|gb|ABI15043.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB] Length = 78 Score = 58.4 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 8/66 (12%) Query: 83 WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 + + +LGPIYG QWR + +Y+ IDQ+ +I+ ++ DP SRR I+ AWN Sbjct: 13 FHREVNDLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNDPTSRRIILCAWN 72 Query: 135 VALIDK 140 V +D+ Sbjct: 73 VKDLDQ 78 >gi|474095|emb|CAA83575.1| thymidylate synthase [Mycoplasma pneumoniae] Length = 50 Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 33/41 (80%), Positives = 38/41 (92%) Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179 D+M LPPCH L+QFYV +G+LSCQLYQRSGD+FLGIPFNIA Sbjct: 1 DQMLLPPCHSLYQFYVQDGQLSCQLYQRSGDIFLGIPFNIA 41 >gi|110006199|gb|ABG48602.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pD] gi|110006201|gb|ABG48603.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pE] gi|112293837|gb|ABI15044.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pD] Length = 78 Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 8/66 (12%) Query: 83 WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 + + +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWN Sbjct: 13 FHREVNDLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNEPTSRRIILCAWN 72 Query: 135 VALIDK 140 V +DK Sbjct: 73 VKDLDK 78 >gi|110006233|gb|ABG48619.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pV] Length = 78 Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKD 75 Query: 138 IDK 140 +DK Sbjct: 76 LDK 78 >gi|110006225|gb|ABG48615.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR] gi|112293879|gb|ABI15065.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR] gi|112293881|gb|ABI15066.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR] Length = 78 Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + +Y+ +DQ+ +I+ ++ +P SRR I+ AWNV Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKD 75 Query: 138 IDK 140 +DK Sbjct: 76 LDK 78 >gi|110006227|gb|ABG48616.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pS] Length = 78 Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + +Y+ +DQ+ +I+ ++ +P SRR I+ AWNV Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKD 75 Query: 138 IDK 140 +DK Sbjct: 76 LDK 78 >gi|110006211|gb|ABG48608.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pJ] Length = 78 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKD 75 Query: 138 IDK 140 +D+ Sbjct: 76 LDQ 78 >gi|108863587|gb|ABG22168.1| DHFR-TS [Haemoproteus lanii] Length = 70 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 8/60 (13%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + DY +DQ+ +++ ++ DP SRR I+ AWN Sbjct: 11 EVNDLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPTSRRIILCAWNPKD 70 >gi|168804053|ref|YP_001686984.1| thymidylate synthase [Glossina pallidipes salivary gland hypertrophy virus] gi|146164240|gb|ABQ08809.1| thymidylate synthase [Glossina pallidipes salivary gland hypertrophy virus] Length = 115 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 6/75 (8%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60 ++Y L+ ++I+ G + S FG Q+ +DL K FPL +K+ W V+ ELL Sbjct: 21 NKYPTLVNNIIEHGISTEKK-----ISVFGAQLEYDLRNKKFPLFISKRYDWAYVIEELL 75 Query: 61 WFLRGDSNVSYLHRH 75 W +RG+++ ++ Sbjct: 76 WCIRGETDRKNINSR 90 >gi|110006203|gb|ABG48604.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pF] Length = 78 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 8/66 (12%) Query: 83 WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 + + +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWN Sbjct: 13 FHREVNDLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNEPTSRRIILCAWN 72 Query: 135 VALIDK 140 V +D+ Sbjct: 73 VKDLDQ 78 >gi|110006205|gb|ABG48605.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum] gi|110006207|gb|ABG48606.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PH] gi|110006209|gb|ABG48607.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PI] gi|110006213|gb|ABG48609.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pK] gi|110006215|gb|ABG48610.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pL] gi|110006217|gb|ABG48611.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM] gi|110006219|gb|ABG48612.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN] gi|112293839|gb|ABI15045.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293841|gb|ABI15046.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293843|gb|ABI15047.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293845|gb|ABI15048.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293847|gb|ABI15049.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293849|gb|ABI15050.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293851|gb|ABI15051.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum] gi|112293853|gb|ABI15052.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum] gi|112293855|gb|ABI15053.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293857|gb|ABI15054.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293859|gb|ABI15055.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293861|gb|ABI15056.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293863|gb|ABI15057.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293865|gb|ABI15058.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293867|gb|ABI15059.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293869|gb|ABI15060.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG] gi|112293871|gb|ABI15061.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM] gi|112293873|gb|ABI15062.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM] gi|112293875|gb|ABI15063.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN] gi|112293877|gb|ABI15064.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN] Length = 78 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKD 75 Query: 138 IDK 140 +D+ Sbjct: 76 LDQ 78 >gi|227431937|ref|ZP_03913958.1| possible thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352306|gb|EEJ42511.1| possible thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 168 Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 32/61 (52%) Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 +Y R+ D F G+ +I S++ + +A + + G++ H++G +H+Y + L Sbjct: 1 MVVYMRANDAFRGMVSDIFSFTFIQEFMARELNLKVGKYYHSMGTMHIYEPDNQWVKHVL 60 Query: 221 S 221 + Sbjct: 61 N 61 >gi|49247548|gb|AAT58676.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. WW1] Length = 78 Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 8/66 (12%) Query: 83 WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 + + +LGPIYG QWR + DY +DQ+ ++++ ++ DP +RR I+ AWN Sbjct: 13 YDREVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIILCAWN 72 Query: 135 VALIDK 140 ++K Sbjct: 73 PKDLEK 78 >gi|110006221|gb|ABG48613.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pO] Length = 78 Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + +Y+ +DQ+ +I+ ++ +P SRR I+ AWNV Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKD 75 Query: 138 IDK 140 +D+ Sbjct: 76 LDQ 78 >gi|49247550|gb|AAT58677.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. SGS1] Length = 73 Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + +Y+ IDQ+ +I+ ++ +P SRR I+ AWNV Sbjct: 11 EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKD 70 Query: 138 IDK 140 +D+ Sbjct: 71 LDQ 73 >gi|49247546|gb|AAT58675.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. SYAT3] gi|108863577|gb|ABG22163.1| DHFR-TS [Haemoproteus minutus] Length = 73 Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 8/66 (12%) Query: 83 WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 + + +LGPIYG QWR + DY +DQ+ ++++ ++ DP +RR I+ AWN Sbjct: 8 YDREVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIILCAWN 67 Query: 135 VALIDK 140 ++K Sbjct: 68 PKDLEK 73 >gi|108863579|gb|ABG22164.1| DHFR-TS [Haemoproteus pallidus] gi|108863581|gb|ABG22165.1| DHFR-TS [Haemoproteus pallidus] Length = 73 Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 8/66 (12%) Query: 83 WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134 + + +LGPIYG QWR + DY +DQ+ ++++ ++ DP +RR I+ AWN Sbjct: 8 YDREVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIIICAWN 67 Query: 135 VALIDK 140 ++K Sbjct: 68 PKDLEK 73 >gi|110006223|gb|ABG48614.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pP] Length = 78 Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 8/63 (12%) Query: 86 KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137 + +LGPIYG QWR + +Y+ +DQ+ +I+ ++ +P SRR ++ AWNV Sbjct: 16 EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRILLCAWNVKD 75 Query: 138 IDK 140 +D+ Sbjct: 76 LDQ 78 >gi|172992|gb|AAA35159.1| thymidylate synthase [Saccharomyces cerevisiae] Length = 38 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 15/28 (53%), Positives = 17/28 (60%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRST 29 QYLDL + +I G R DRTG GT S Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTGTLSL 38 >gi|157362353|dbj|BAF80312.1| thymidylate synthase [Macaca mulatta] Length = 68 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 22/37 (59%) Query: 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS 39 QYL + H+++ G + D TG GT S +G Q R+ L Sbjct: 32 QYLGQIEHILRCGVRKDDGTGTGTLSVYGMQARYSLR 68 >gi|6573117|gb|AAF17556.1|AF201743_1 thymidylate synthase [Canis lupus familiaris] Length = 38 Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 26/38 (68%), Positives = 33/38 (86%) Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195 +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + Sbjct: 1 ELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 38 >gi|298530528|ref|ZP_07017930.1| thymidylate synthase-like protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509902|gb|EFI33806.1| thymidylate synthase-like protein [Desulfonatronospira thiodismutans ASO3-1] Length = 224 Score = 55.7 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI-GF 194 + PPC + +G+L Y RS D++ G P N+A ++L +A I G Sbjct: 133 PEDHLLNDPPCLRHIDMRIRDGRLIFYPYFRSWDLWGGFPANLAGIAVLQKYMADSIEGV 192 Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226 G + + +H+Y E A ++ R Sbjct: 193 SPGPILASSKGLHIYGYAEELARIRTCRKDAP 224 >gi|329847890|ref|ZP_08262918.1| thymidylate synthase protein [Asticcacaulis biprosthecum C19] gi|328842953|gb|EGF92522.1| thymidylate synthase protein [Asticcacaulis biprosthecum C19] Length = 166 Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 32/56 (57%) Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220 RS D +LG+P +I +++L ++A + + G + H++G +HLY + A L Sbjct: 1 MRSNDAYLGLPHDIFCFTMLQELIAGSLSAKLGTYKHSVGSLHLYTENAIAAQEFL 56 >gi|190702141|gb|ACE75860.1| putative thymidylate synthase-like protein [uncultured virus] Length = 59 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 5/63 (7%) Query: 81 DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140 + + G+LGP+YG QWR++ N +DQI ++ ++ +P+ +V++WNV+ + K Sbjct: 2 NASKIRLGDLGPVYGHQWRNF-----NGVDQIQQLINKIQDNPFRTDLMVNSWNVSDLPK 56 Query: 141 MAL 143 MAL Sbjct: 57 MAL 59 >gi|169841694|ref|ZP_02874803.1| thymidylate synthase [candidate division TM7 single-cell isolate TM7a] Length = 60 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/43 (58%), Positives = 34/43 (79%) Query: 45 LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD 87 +TTKK+++ SV HELLWFL+G N+ YL ++GV IWDEW K+ Sbjct: 1 MTTKKLYFNSVAHELLWFLKGTGNIEYLAQNGVHIWDEWPYKN 43 >gi|152002541|dbj|BAF73565.1| thymidylate synthase [Onion yellows phytoplasma OY-W] Length = 55 Score = 52.6 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 22/41 (53%), Positives = 36/41 (87%) Query: 44 LLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWA 84 +LTTKK++ +S++HELLWFL+GD+N+ Y+ ++ V+IW+EW Sbjct: 1 MLTTKKMNLRSIIHELLWFLKGDTNICYVVQNNVNIWNEWP 41 >gi|168804052|ref|YP_001686983.1| thymidylate synthase-like protein [Glossina pallidipes salivary gland hypertrophy virus] gi|146164239|gb|ABQ08808.1| thymidylate synthase-like protein [Glossina pallidipes salivary gland hypertrophy virus] Length = 87 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 34/79 (43%) Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234 P IA YSLLT M+A V +T+G ++ + P++I+ Sbjct: 6 PLTIAKYSLLTYMIAYVCNLMPYSITYTMGVSYINKYELDILQSYTKMKQYKFPRLIVEH 65 Query: 235 NIVDLLSFRYEDFTLRSYE 253 + D+ SF +F L Y+ Sbjct: 66 YVKDIYSFNLGNFLLYDYQ 84 >gi|899339|emb|CAA32651.1| thymidylate synthase (exons 5-7) [Mus musculus] Length = 30 Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 17/30 (56%), Positives = 21/30 (70%) Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 G Q G+F+HTLGD H+Y NH E +QL R Sbjct: 1 GLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 30 >gi|270619619|ref|ZP_06221821.1| thymidylate synthase [Haemophilus influenzae HK1212] gi|270317825|gb|EFA29182.1| thymidylate synthase [Haemophilus influenzae HK1212] Length = 33 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 1 MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGY 32 M QYLDL R ++ G +RTG S Sbjct: 1 MKQYLDLCRRIVNEGEWVANERTGKHCLSVINA 33 >gi|297204894|ref|ZP_06922291.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197711667|gb|EDY55701.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 267 Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 20/162 (12%) Query: 67 SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126 ++ + L +++ G Y + ++P IDQI +I+ LR S+ Sbjct: 87 TDHASLVARYRAMYLRIKRYPGNAHGTYFGRLVAYPGAKKTDIDQIGNIIGRLRKQAGSK 146 Query: 127 RHIVSAW-----NVALIDKMAL--------------PPCHCLFQFYVD-NGKLSCQLYQR 166 + +A+ + A D A PC F +D + ++ R Sbjct: 147 GPMTAAYEADLAHPADGDVPAELLVHAADRDNLYRGFPCLSHVSFQLDRDRRVHAAALYR 206 Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 S +F N L +++ G G G HL Sbjct: 207 SQYMFERAYGNYLGLGRLLAYISAQAGLAVGTLTVVAGHAHL 248 >gi|289466138|gb|ADC94836.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] Length = 347 Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 22/31 (70%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY 32 +QYL+++ ++ G+ + DRTGVG S FGY Sbjct: 316 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGY 346 >gi|289466132|gb|ADC94833.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] gi|289466136|gb|ADC94835.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] Length = 347 Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 22/31 (70%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY 32 +QYL+++ ++ G+ + DRTGVG S FGY Sbjct: 316 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGY 346 >gi|289466134|gb|ADC94834.1| dihydrofolate reductase-thymidylate synthase [Plasmodium falciparum] Length = 347 Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 22/31 (70%) Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY 32 +QYL+++ ++ G+ + DRTGVG S FGY Sbjct: 316 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGY 346 >gi|330891850|gb|EGH24511.1| thymidylate synthase [Pseudomonas syringae pv. mori str. 301020] Length = 24 Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264 DFTL Y+ H A+ A ++V Sbjct: 2 IEPSDFTLEGYQHHPAMTAPMAV 24 >gi|29826760|ref|NP_821394.1| hypothetical protein SAV_220 [Streptomyces avermitilis MA-4680] gi|29603856|dbj|BAC67929.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 267 Score = 42.2 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 26/219 (11%) Query: 16 SDRRDRTGVGTRSTFGYQMRFDL---SKGFPLLTTKKVHWKSVVHELLW---FLRGDSNV 69 D DRTG+ T D ++ L T + + V L+ ++ Sbjct: 30 KDNPDRTGLHTVVRIADPTSDDPVFRAELDRLRTARGLWPLETVASTLFPAALAARSADP 89 Query: 70 SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129 L ++ G Y + +P IDQ+S+++ LR + Sbjct: 90 DDLAERYRRMYPVIKRYPGNHRGTYFGRLVFYPAASKTGIDQLSTVISRLRTQAAGTKIA 149 Query: 130 VSA-------------------WNVALIDKMALPPCHCLFQFYVD-NGKLSCQLYQRSGD 169 + + PC +D + ++ RS Sbjct: 150 AAYEIDIAAATDQEEAGADLLVHTAGKDNSYIGFPCLSHISLQLDRDRRVHAAALYRSHF 209 Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208 +F N L +A G G L Sbjct: 210 MFERAYGNYLGLGRLLAYIAQQAELACGTLTVMAGHARL 248 >gi|509022|gb|AAA32525.1| td [Enterobacteria phage T4] Length = 36 Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 17/35 (48%) Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 + + +L R +DF L +Y H I K++V Sbjct: 2 LSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 36 >gi|254232622|ref|ZP_04925949.1| hypothetical protein TBCG_02432 [Mycobacterium tuberculosis C] gi|124601681|gb|EAY60691.1| hypothetical protein TBCG_02432 [Mycobacterium tuberculosis C] Length = 253 Score = 40.3 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 17/159 (10%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N + L I++ +D ++ + +S+ I +++ L P S++ Sbjct: 71 NSAQLKAMLDFIFNTDTMEDIDVVKSFSRGAKSYHRRIKEGR-MIEFVIERLSLIPESKK 129 Query: 128 HIVSAWNVALI------DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFN 177 +V + PC QF + + Y RS D + N Sbjct: 130 AVVVFPTYEDYAAVMRNHRDDYLPCLVSIQFRLLPDGKDYVFHTTFYSRSMDAWQKGHGN 189 Query: 178 IASYSLLTMMLASVIGFQYGEFIH------TLGDVHLYN 210 + S + L+ + + + G I + DVH+Y Sbjct: 190 LLSIAKLSDWVRENVSARIGRKIMLGPLDGMICDVHIYK 228 >gi|22796918|emb|CAA31422.1| thymidylate synthase [Mus musculus] Length = 24 Score = 39.9 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 17/24 (70%) Query: 196 YGEFIHTLGDVHLYNNHFEQADLQ 219 G+F+HTLGD H+Y NH E +Q Sbjct: 1 PGDFVHTLGDAHIYLNHIEPLKIQ 24 >gi|260463676|ref|ZP_05811874.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] gi|319785163|ref|YP_004144639.1| hypothetical protein Mesci_5492 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259030530|gb|EEW31808.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] gi|317171051|gb|ADV14589.1| hypothetical protein Mesci_5492 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 258 Score = 39.9 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 58/157 (36%), Gaps = 17/157 (10%) Query: 69 VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV---IDQISSIVQSLRADPYS 125 + L + + +++ + GE G Y + +WP+ G ++Q+S+ +++LRA Sbjct: 82 IDALTKRYMQVYERRMHRQGEWG-RYFQRMVAWPNGGGRGAGTVNQLSANIETLRAMRSG 140 Query: 126 RRHIV------SAWNVA-LIDKMALPPCHCLFQFYVDNG----KLSCQLYQRSGDVFLGI 174 + ++ A + K C + + +LS R+ Sbjct: 141 EAKFFGNVTEIALFDPARDLRKKMNRQCLSFIELKPERQGNIWRLSMMAVYRNHYYVQRT 200 Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211 N+ L +A+ GF+ G T+ H + Sbjct: 201 LGNLIGLGRLLQFIANETGFEIGTL--TIQSTHACLD 235 >gi|322639438|gb|EFY36126.1| hypothetical protein SEEM954_11367 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] Length = 44 Score = 39.5 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 9/52 (17%) Query: 1 MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52 M QYL+L++ V+ G+ + +T RF +LT +K Sbjct: 1 MKQYLELMQKVLDEGTQK---------TTVPAPARFPFLAIRCVLTCRKAFL 43 >gi|15609629|ref|NP_217008.1| hypothetical protein Rv2492 [Mycobacterium tuberculosis H37Rv] gi|15842020|ref|NP_337057.1| hypothetical protein MT2567 [Mycobacterium tuberculosis CDC1551] gi|148662328|ref|YP_001283851.1| hypothetical protein MRA_2518 [Mycobacterium tuberculosis H37Ra] gi|148823690|ref|YP_001288444.1| hypothetical protein TBFG_12515 [Mycobacterium tuberculosis F11] gi|167967638|ref|ZP_02549915.1| hypothetical protein MtubH3_06216 [Mycobacterium tuberculosis H37Ra] gi|254366797|ref|ZP_04982839.1| hypothetical protein TBHG_02430 [Mycobacterium tuberculosis str. Haarlem] gi|254551539|ref|ZP_05141986.1| hypothetical protein Mtube_13960 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289762660|ref|ZP_06522038.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|306776765|ref|ZP_07415102.1| hypothetical protein TMAG_02294 [Mycobacterium tuberculosis SUMu001] gi|306780532|ref|ZP_07418869.1| hypothetical protein TMBG_01031 [Mycobacterium tuberculosis SUMu002] gi|306789646|ref|ZP_07427968.1| hypothetical protein TMDG_04000 [Mycobacterium tuberculosis SUMu004] gi|306972876|ref|ZP_07485537.1| hypothetical protein TMJG_01470 [Mycobacterium tuberculosis SUMu010] gi|307080590|ref|ZP_07489760.1| hypothetical protein TMKG_02919 [Mycobacterium tuberculosis SUMu011] gi|2791532|emb|CAA16069.1| HYPOTHETICAL PROTEIN Rv2492 [Mycobacterium tuberculosis H37Rv] gi|13882297|gb|AAK46871.1| hypothetical protein MT2567 [Mycobacterium tuberculosis CDC1551] gi|134152307|gb|EBA44352.1| hypothetical protein TBHG_02430 [Mycobacterium tuberculosis str. Haarlem] gi|148506480|gb|ABQ74289.1| hypothetical protein MRA_2518 [Mycobacterium tuberculosis H37Ra] gi|148722217|gb|ABR06842.1| hypothetical protein TBFG_12515 [Mycobacterium tuberculosis F11] gi|289710166|gb|EFD74182.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|308214826|gb|EFO74225.1| hypothetical protein TMAG_02294 [Mycobacterium tuberculosis SUMu001] gi|308326598|gb|EFP15449.1| hypothetical protein TMBG_01031 [Mycobacterium tuberculosis SUMu002] gi|308333863|gb|EFP22714.1| hypothetical protein TMDG_04000 [Mycobacterium tuberculosis SUMu004] gi|308357703|gb|EFP46554.1| hypothetical protein TMJG_01470 [Mycobacterium tuberculosis SUMu010] gi|308361644|gb|EFP50495.1| hypothetical protein TMKG_02919 [Mycobacterium tuberculosis SUMu011] Length = 250 Score = 39.5 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 17/159 (10%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N + L +++ +D ++ + +S+ I +++ L P S++ Sbjct: 68 NSAQLKAMLDFMFNTDTMEDIDVVKSFSRGAKSYHRRIKEGR-MIEFVIERLSLIPESKK 126 Query: 128 HIVSAWNVALI------DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFN 177 +V + PC QF + + Y RS D + N Sbjct: 127 AVVVFPTYEDYAAVMRNHRDDYLPCLVSIQFRLLPDGKDYVFHTTFYSRSMDAWQKGHGN 186 Query: 178 IASYSLLTMMLASVIGFQYGEFIH------TLGDVHLYN 210 + S + L+ + + + G I + DVH+Y Sbjct: 187 LLSIAKLSDWVRENVSARIGRKIMLGPLDGMICDVHIYK 225 >gi|218754224|ref|ZP_03533020.1| hypothetical protein MtubG1_12679 [Mycobacterium tuberculosis GM 1503] gi|308371032|ref|ZP_07423614.2| hypothetical protein TMCG_03976 [Mycobacterium tuberculosis SUMu003] gi|308373431|ref|ZP_07432275.2| hypothetical protein TMEG_03165 [Mycobacterium tuberculosis SUMu005] gi|308374596|ref|ZP_07436670.2| hypothetical protein TMFG_03715 [Mycobacterium tuberculosis SUMu006] gi|308375570|ref|ZP_07444379.2| hypothetical protein TMGG_02383 [Mycobacterium tuberculosis SUMu007] gi|308377031|ref|ZP_07440916.2| hypothetical protein TMHG_01684 [Mycobacterium tuberculosis SUMu008] gi|308378029|ref|ZP_07481305.2| hypothetical protein TMIG_04037 [Mycobacterium tuberculosis SUMu009] gi|308330020|gb|EFP18871.1| hypothetical protein TMCG_03976 [Mycobacterium tuberculosis SUMu003] gi|308337663|gb|EFP26514.1| hypothetical protein TMEG_03165 [Mycobacterium tuberculosis SUMu005] gi|308341344|gb|EFP30195.1| hypothetical protein TMFG_03715 [Mycobacterium tuberculosis SUMu006] gi|308345899|gb|EFP34750.1| hypothetical protein TMGG_02383 [Mycobacterium tuberculosis SUMu007] gi|308349136|gb|EFP37987.1| hypothetical protein TMHG_01684 [Mycobacterium tuberculosis SUMu008] gi|308353760|gb|EFP42611.1| hypothetical protein TMIG_04037 [Mycobacterium tuberculosis SUMu009] gi|323718900|gb|EGB28054.1| hypothetical protein TMMG_02499 [Mycobacterium tuberculosis CDC1551A] Length = 253 Score = 39.5 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 17/159 (10%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N + L +++ +D ++ + +S+ I +++ L P S++ Sbjct: 71 NSAQLKAMLDFMFNTDTMEDIDVVKSFSRGAKSYHRRIKEGR-MIEFVIERLSLIPESKK 129 Query: 128 HIVSAWNVALI------DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFN 177 +V + PC QF + + Y RS D + N Sbjct: 130 AVVVFPTYEDYAAVMRNHRDDYLPCLVSIQFRLLPDGKDYVFHTTFYSRSMDAWQKGHGN 189 Query: 178 IASYSLLTMMLASVIGFQYGEFIH------TLGDVHLYN 210 + S + L+ + + + G I + DVH+Y Sbjct: 190 LLSIAKLSDWVRENVSARIGRKIMLGPLDGMICDVHIYK 228 >gi|31793672|ref|NP_856165.1| hypothetical protein Mb2520 [Mycobacterium bovis AF2122/97] gi|121638374|ref|YP_978598.1| hypothetical protein BCG_2512 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990868|ref|YP_002645555.1| hypothetical protein JTY_2506 [Mycobacterium bovis BCG str. Tokyo 172] gi|260187499|ref|ZP_05764973.1| hypothetical protein MtubCP_15917 [Mycobacterium tuberculosis CPHL_A] gi|260205807|ref|ZP_05773298.1| hypothetical protein MtubK8_16071 [Mycobacterium tuberculosis K85] gi|289448137|ref|ZP_06437881.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289575197|ref|ZP_06455424.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289746274|ref|ZP_06505652.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289751101|ref|ZP_06510479.1| hypothetical protein TBDG_04112 [Mycobacterium tuberculosis T92] gi|289754602|ref|ZP_06513980.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|294994400|ref|ZP_06800091.1| hypothetical protein Mtub2_07758 [Mycobacterium tuberculosis 210] gi|298525965|ref|ZP_07013374.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|31619265|emb|CAD97381.1| HYPOTHETICAL PROTEIN Mb2520 [Mycobacterium bovis AF2122/97] gi|121494022|emb|CAL72500.1| Hypothetical protein BCG_2512 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773981|dbj|BAH26787.1| hypothetical protein JTY_2506 [Mycobacterium bovis BCG str. Tokyo 172] gi|289421095|gb|EFD18296.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289539628|gb|EFD44206.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289686802|gb|EFD54290.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289691688|gb|EFD59117.1| hypothetical protein TBDG_04112 [Mycobacterium tuberculosis T92] gi|289695189|gb|EFD62618.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|298495759|gb|EFI31053.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|326904106|gb|EGE51039.1| hypothetical protein TBPG_01999 [Mycobacterium tuberculosis W-148] Length = 250 Score = 39.5 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 53/159 (33%), Gaps = 17/159 (10%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N L +++ +D ++ + +S+ I +++ L P S++ Sbjct: 68 NSDQLKAMLDFMFNTDTMEDIDVVKSFSRGAKSYHRRIKEGR-MIEFVIERLSLIPESKK 126 Query: 128 HIVSAWNVALI------DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFN 177 +V + PC QF + + Y RS D + N Sbjct: 127 AVVVFPTYEDYAAVMRNHRDDYLPCLVSIQFRLLPDGKDYVFHTTFYSRSMDAWQKGHGN 186 Query: 178 IASYSLLTMMLASVIGFQYGEFIH------TLGDVHLYN 210 + S + L+ + + + G I + DVH+Y Sbjct: 187 LLSIAKLSDWVRENVSARIGRKIMLGPLDGMICDVHIYK 225 >gi|215404428|ref|ZP_03416609.1| hypothetical protein Mtub0_12246 [Mycobacterium tuberculosis 02_1987] gi|215412258|ref|ZP_03421018.1| hypothetical protein Mtub9_13013 [Mycobacterium tuberculosis 94_M4241A] gi|215427875|ref|ZP_03425794.1| hypothetical protein MtubT9_16423 [Mycobacterium tuberculosis T92] gi|215431438|ref|ZP_03429357.1| hypothetical protein MtubE_12329 [Mycobacterium tuberculosis EAS054] Length = 253 Score = 39.5 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 53/159 (33%), Gaps = 17/159 (10%) Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127 N L +++ +D ++ + +S+ I +++ L P S++ Sbjct: 71 NSDQLKAMLDFMFNTDTMEDIDVVKSFSRGAKSYHRRIKEGR-MIEFVIERLSLIPESKK 129 Query: 128 HIVSAWNVALI------DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFN 177 +V + PC QF + + Y RS D + N Sbjct: 130 AVVVFPTYEDYAAVMRNHRDDYLPCLVSIQFRLLPDGKDYVFHTTFYSRSMDAWQKGHGN 189 Query: 178 IASYSLLTMMLASVIGFQYGEFIH------TLGDVHLYN 210 + S + L+ + + + G I + DVH+Y Sbjct: 190 LLSIAKLSDWVRENVSARIGRKIMLGPLDGMICDVHIYK 228 >gi|238917544|ref|YP_002931061.1| phosphomannomutase [Eubacterium eligens ATCC 27750] gi|238872904|gb|ACR72614.1| phosphomannomutase [Eubacterium eligens ATCC 27750] Length = 575 Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 4/80 (5%) Query: 69 VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128 +Y G+++WD+ + + G Q ++ QI+ ++ LR +P + Sbjct: 431 AAYYKSKGITLWDQMINIFDKYGYFKEGQ-KAVTMKGAEGAVQIAKMMDDLRNNPPKK-- 487 Query: 129 IVSAWNVALIDKMALPPCHC 148 AWNV C Sbjct: 488 -FGAWNVVEFRDYKKDECTV 506 >gi|322805079|emb|CBZ02639.1| thymidylate synthase [Clostridium botulinum H04402 065] Length = 142 Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPNIV 237 L LA+ + G++ H + H+Y F+ A+ L + + P+M N Sbjct: 7 LFKNFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSAKKELSFPRMPKKDNWE 66 Query: 238 DL 239 DL Sbjct: 67 DL 68 >gi|300863871|ref|ZP_07108793.1| Sensor protein [Oscillatoria sp. PCC 6506] gi|300338139|emb|CBN53939.1| Sensor protein [Oscillatoria sp. PCC 6506] Length = 491 Score = 36.8 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 67/212 (31%), Gaps = 14/212 (6%) Query: 37 DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGV 96 D S P ++K V K++ E W L + + + D D EL P Sbjct: 78 DRSMNLPGQSSKVV--KAMYFEPPWNLDQQ-----VRDYITKVRDLVQSPDIELEPNNPH 130 Query: 97 QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN 156 G +++ + ++V + + S + + ++ L + C Q Sbjct: 131 LNYIVTAAYGRLLESLDAVVTQYQHESESEQLEMDIKHLELYQE----SCAATTQAEAQA 186 Query: 157 GKLSCQLY-QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215 +L L + L ++S L +A I L +Y Sbjct: 187 AELEKALIGLKQAQAKLLHSEKMSSLGQLVASVAHEINNPVSFIYGNLSHAEVYTQDLLH 246 Query: 216 ADLQLSRSPRTLPQMIINPNIVDLL-SFRYED 246 L R + P I +I D+ F ED Sbjct: 247 LLE-LYREYYSEPTPEIQQHIKDIDLDFLIED 277 >gi|170580066|ref|XP_001895098.1| hypothetical protein Bm1_18205 [Brugia malayi] gi|158598062|gb|EDP36047.1| hypothetical protein Bm1_18205 [Brugia malayi] Length = 83 Score = 36.4 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 9/63 (14%) Query: 81 DEWADKDGELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132 D +G+L P+YG Q + DY IDQ+S I+ ++ +P++R I++A Sbjct: 21 DFSDRSEGDLRPVYGFQGNTVLAEYRGMDADYINQGIDQLSEIIDLMKNEPHNR-CILNA 79 Query: 133 WNV 135 WNV Sbjct: 80 WNV 82 >gi|194900964|ref|XP_001980025.1| GG20737 [Drosophila erecta] gi|190651728|gb|EDV48983.1| GG20737 [Drosophila erecta] Length = 1096 Score = 36.0 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 21/130 (16%) Query: 126 RRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLT 185 RRH+++ + + C V+N +L +Y + Y+ Sbjct: 489 RRHLINTHKETIDPAL----CEHCGWRSVNNRELHFHMY-------MEHQIKSLLYTFAE 537 Query: 186 MMLASVIGFQYGEFIHTLGDVH--------LYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 L + GE + + H +Y N + +LQL R ++ + + Sbjct: 538 CALCNQSYLTKGELETHINEAHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDG- 596 Query: 238 DLLSFRYEDF 247 ++ E+F Sbjct: 597 -IIDETDEEF 605 >gi|195501374|ref|XP_002097770.1| Cen190 [Drosophila yakuba] gi|194183871|gb|EDW97482.1| Cen190 [Drosophila yakuba] Length = 1096 Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 21/130 (16%) Query: 126 RRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLT 185 RRH+++ + + C V+N +L +Y + Y+ Sbjct: 491 RRHLINTHKETIDPAL----CEHCGWRSVNNRELHFHMY-------MEHQIKSLLYTFAE 539 Query: 186 MMLASVIGFQYGEFIHTLGDVH--------LYNNHFEQADLQLSRSPRTLPQMIINPNIV 237 L + GE + + H +Y N + +LQL R ++ + + Sbjct: 540 CALCNQSYLTKGELEAHINEAHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDG- 598 Query: 238 DLLSFRYEDF 247 ++ E+F Sbjct: 599 -IIDETDEEF 607 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.318 0.152 0.501 Lambda K H 0.267 0.0466 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,799,088,434 Number of Sequences: 14124377 Number of extensions: 258886399 Number of successful extensions: 769794 Number of sequences better than 10.0: 2431 Number of HSP's better than 10.0 without gapping: 4712 Number of HSP's successfully gapped in prelim test: 103 Number of HSP's that attempted gapping in prelim test: 756838 Number of HSP's gapped (non-prelim): 5536 length of query: 264 length of database: 4,842,793,630 effective HSP length: 136 effective length of query: 128 effective length of database: 2,921,878,358 effective search space: 374000429824 effective search space used: 374000429824 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 80 (35.2 bits)