BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780956|ref|YP_003065369.1| thymidylate synthase
[Candidatus Liberibacter asiaticus str. psy62]
         (264 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780956|ref|YP_003065369.1| thymidylate synthase [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040633|gb|ACT57429.1| thymidylate synthase [Candidatus Liberibacter asiaticus str. psy62]
          Length = 264

 Score =  548 bits (1412), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/264 (100%), Positives = 264/264 (100%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL
Sbjct: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR
Sbjct: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS
Sbjct: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL
Sbjct: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFRYEDFTLRSYEPHAAILAKVSV
Sbjct: 241 SFRYEDFTLRSYEPHAAILAKVSV 264


>gi|315122502|ref|YP_004062991.1| thymidylate synthase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495904|gb|ADR52503.1| thymidylate synthase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 264

 Score =  495 bits (1274), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 234/264 (88%), Positives = 249/264 (94%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LLRHVI  GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH KSV++ELL
Sbjct: 1   MRQYLNLLRHVITSGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G SN+SYLH+HGVSIWDEWA KDG+LGPIYGVQWRSWPDYDGN IDQISSI++SLR
Sbjct: 61  WFLKGGSNISYLHQHGVSIWDEWASKDGDLGPIYGVQWRSWPDYDGNTIDQISSIIRSLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD+GKLSCQLYQRSGDVFLGIPFNIAS
Sbjct: 121 TDPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDDGKLSCQLYQRSGDVFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLTMMLASVIGF+YGEFIHTLGDVHLYNNHFEQA LQLSRSP+  P MIINPN+VDL 
Sbjct: 181 YSLLTMMLASVIGFRYGEFIHTLGDVHLYNNHFEQAHLQLSRSPKKTPHMIINPNVVDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDFTL SYEPHAAI AKV+V
Sbjct: 241 SFQYEDFTLESYEPHAAIPAKVTV 264


>gi|150397222|ref|YP_001327689.1| thymidylate synthase [Sinorhizobium medicae WSM419]
 gi|166231736|sp|A6UB24|TYSY_SINMW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|150028737|gb|ABR60854.1| Thymidylate synthase [Sinorhizobium medicae WSM419]
          Length = 264

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 183/264 (69%), Positives = 223/264 (84%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HVI+ G+DR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL
Sbjct: 1   MRQYLDLLEHVIETGTDRGDRTGTGTRSVFGYQMRFDLSQGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  HGV IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ L+
Sbjct: 61  WFLKGDTNIAYLKEHGVRIWDEWADENGDLGPVYGYQWRSWPTPDGGHIDQIATLVEGLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN AL+D MALPPCHCLFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 TNPNSRRHIVSAWNPALVDDMALPPCHCLFQFYVADGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NHFEQA LQL+R+P+ LP+M INP + DL 
Sbjct: 181 YALLTMMVAQVTGLEAGDFVHTLGDAHIYRNHFEQAQLQLTRTPKPLPRMEINPAVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFR+EDF L  YE  + I A V+V
Sbjct: 241 SFRFEDFELTGYEADSHIKAPVAV 264


>gi|15965880|ref|NP_386233.1| thymidylate synthase [Sinorhizobium meliloti 1021]
 gi|307309638|ref|ZP_07589291.1| thymidylate synthase [Sinorhizobium meliloti BL225C]
 gi|307321777|ref|ZP_07601165.1| thymidylate synthase [Sinorhizobium meliloti AK83]
 gi|22096227|sp|Q92NQ5|TYSY_RHIME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|15075149|emb|CAC46706.1| Probable thymidylate synthase [Sinorhizobium meliloti 1021]
 gi|306892599|gb|EFN23397.1| thymidylate synthase [Sinorhizobium meliloti AK83]
 gi|306899973|gb|EFN30595.1| thymidylate synthase [Sinorhizobium meliloti BL225C]
          Length = 264

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 184/264 (69%), Positives = 223/264 (84%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HVI  G+DR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL
Sbjct: 1   MRQYLDLLEHVITTGTDRGDRTGTGTRSVFGYQMRFDLSQGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV+YL  +GVSIWDEWAD++GELGP+YG QWRSWP  DG  IDQI+++V+ L+
Sbjct: 61  WFLRGDTNVAYLKDNGVSIWDEWADENGELGPVYGYQWRSWPTPDGRHIDQIAALVEGLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NHFEQA LQL+R+P+ LP+M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLEAGDFVHTLGDAHIYRNHFEQAQLQLTRTPKPLPKMEINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFR+EDF L  YE  + I A V+V
Sbjct: 241 SFRFEDFELVGYEADSHIKAPVAV 264


>gi|325293415|ref|YP_004279279.1| Thymidylate synthase [Agrobacterium sp. H13-3]
 gi|325061268|gb|ADY64959.1| Thymidylate synthase [Agrobacterium sp. H13-3]
          Length = 264

 Score =  407 bits (1047), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 226/264 (85%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV+  GSDR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLRHVMDTGSDRGDRTGTGTRSVFGYQMRFDLAEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+ ++++L+
Sbjct: 61  WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIALLIEALK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+HTLGD H+Y NHFEQA LQ++R+P+ LP M +NP++ DL 
Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHIYANHFEQAKLQMTRTPKALPTMRLNPDVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDFTL +YE  + I A ++V
Sbjct: 241 SFKFEDFTLENYEADSTIKAPIAV 264


>gi|159185026|ref|NP_355015.2| thymidylate synthase [Agrobacterium tumefaciens str. C58]
 gi|22096221|sp|Q8UDS3|TYSY_AGRT5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|159140300|gb|AAK87800.2| thymidylate synthase [Agrobacterium tumefaciens str. C58]
          Length = 264

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 227/264 (85%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV++ GSDR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLRHVMETGSDRGDRTGTGTRSVFGYQMRFDLSEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+ ++++L+
Sbjct: 61  WFLNGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIALLIEALK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V+G + G+F+HTLGD H+Y NHFEQA LQ++R+P+ LP M +NP++ +L 
Sbjct: 181 YALLTLMVAQVVGLKPGDFVHTLGDAHIYANHFEQAQLQMTRTPKALPTMRLNPDVKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +YE  ++I A ++V
Sbjct: 241 GFKFEDFTLENYEADSSIKAPIAV 264


>gi|255066674|ref|ZP_05318529.1| thymidylate synthase [Neisseria sicca ATCC 29256]
 gi|255049002|gb|EET44466.1| thymidylate synthase [Neisseria sicca ATCC 29256]
          Length = 264

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 182/264 (68%), Positives = 221/264 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVFENGTDKSDRTGTGTRSVFGYQMRFDLSQGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD HLY+NHFEQA LQLSR+PRTLP M INP + DL 
Sbjct: 181 YALLTMMVAQVCGLEAGEFIHTLGDAHLYSNHFEQAKLQLSRAPRTLPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A V+V
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVAV 264


>gi|325205579|gb|ADZ01032.1| thymidylate synthase [Neisseria meningitidis M04-240196]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 181/264 (68%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R PRTLP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L  Y+PH  I A VSV
Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264


>gi|254805456|ref|YP_003083677.1| Thymidylate synthase [Neisseria meningitidis alpha14]
 gi|254668998|emb|CBA07364.1| Thymidylate synthase [Neisseria meningitidis alpha14]
 gi|325142868|gb|EGC65235.1| thymidylate synthase [Neisseria meningitidis 961-5945]
 gi|325198801|gb|ADY94257.1| thymidylate synthase [Neisseria meningitidis G2136]
          Length = 264

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 180/264 (68%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R PRTLP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L  Y+PH  I A VSV
Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264


>gi|313575265|emb|CBI71203.1| hypothetical protein [uncultured bacterium]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 180/264 (68%), Positives = 220/264 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV++ G+DR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLRHVMETGTDRGDRTGKGTRSIFGYQMRFDLAEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GVSIWDEWAD+ GELGP+YG QWRSWP  DG  IDQIS +++ L+
Sbjct: 61  WFLKGDTNVAYLTENGVSIWDEWADEKGELGPVYGYQWRSWPAPDGRHIDQISQLIEGLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNV  +D+MALP CHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 VNPNSRRHIVSAWNVGQLDEMALPACHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y++HFEQA LQL+R+P+ LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDTHIYSDHFEQAKLQLTRTPKALPTMRINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFR+EDF L  YE    I A V+V
Sbjct: 241 SFRFEDFALEGYEADPHIKAAVAV 264


>gi|329119726|ref|ZP_08248406.1| thymidylate synthase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464175|gb|EGF10480.1| thymidylate synthase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 179/264 (67%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V+  G+D+ DRTG GTRS FG+QMRFDL  GFPLLTTKK+H +S++HELL
Sbjct: 1   MRQYLDLMRRVLDSGTDKSDRTGTGTRSVFGHQMRFDLQDGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YLH + VSIWDEWAD++GELGP+YG QWRSWP  DG  IDQI++++  ++
Sbjct: 61  WFLRGDTNIRYLHENQVSIWDEWADENGELGPVYGYQWRSWPAPDGRHIDQIANVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ANPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM A V G Q GEF+HTLGD HLY NHFEQA LQL+R PRTLP+M +NP + D+ 
Sbjct: 181 YALLTMMAAQVCGLQAGEFVHTLGDAHLYRNHFEQAKLQLTREPRTLPKMTLNPAVRDIS 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++DFTL  Y+PH  I A V+V
Sbjct: 241 AFTFDDFTLTGYDPHPHIKAAVAV 264


>gi|313667906|ref|YP_004048190.1| thymidylate synthase [Neisseria lactamica ST-640]
 gi|313005368|emb|CBN86802.1| thymidylate synthase [Neisseria lactamica 020-06]
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264


>gi|269214226|ref|ZP_05986099.2| thymidylate synthase [Neisseria lactamica ATCC 23970]
 gi|269210433|gb|EEZ76888.1| thymidylate synthase [Neisseria lactamica ATCC 23970]
          Length = 266

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEVGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266


>gi|121635345|ref|YP_975590.1| thymidylate synthase [Neisseria meningitidis FAM18]
 gi|166231719|sp|A1KVB3|TYSY_NEIMF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120867051|emb|CAM10814.1| thymidylate synthase [Neisseria meningitidis FAM18]
 gi|325132802|gb|EGC55482.1| thymidylate synthase [Neisseria meningitidis M6190]
 gi|325138705|gb|EGC61257.1| thymidylate synthase [Neisseria meningitidis ES14902]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L  Y+PH  I A VSV
Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264


>gi|222149084|ref|YP_002550041.1| thymidylate synthase [Agrobacterium vitis S4]
 gi|254790228|sp|B9JXQ5|TYSY_AGRVS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|221736069|gb|ACM37032.1| thymidylate synthase [Agrobacterium vitis S4]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 221/264 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV++ GSDR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLQHVMENGSDRGDRTGTGTRSVFGYQMRFDLAQGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GVSIWDEWAD++G+LGP+YG QWRSWP   G  IDQI+++V+S++
Sbjct: 61  WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPKPGGGHIDQIANLVESIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY NHFEQA LQL+R P+ LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKAGDFIHTLGDAHLYANHFEQARLQLTRQPKPLPVMRINPDVKDVF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF+L +Y     I A ++V
Sbjct: 241 GFAFEDFSLENYSADPVIKAPIAV 264


>gi|59801705|ref|YP_208417.1| thymidylate synthase [Neisseria gonorrhoeae FA 1090]
 gi|239999430|ref|ZP_04719354.1| thymidylate synthase [Neisseria gonorrhoeae 35/02]
 gi|240014606|ref|ZP_04721519.1| thymidylate synthase [Neisseria gonorrhoeae DGI18]
 gi|240017051|ref|ZP_04723591.1| thymidylate synthase [Neisseria gonorrhoeae FA6140]
 gi|240081310|ref|ZP_04725853.1| thymidylate synthase [Neisseria gonorrhoeae FA19]
 gi|240113520|ref|ZP_04728010.1| thymidylate synthase [Neisseria gonorrhoeae MS11]
 gi|240116127|ref|ZP_04730189.1| thymidylate synthase [Neisseria gonorrhoeae PID18]
 gi|240118411|ref|ZP_04732473.1| thymidylate synthase [Neisseria gonorrhoeae PID1]
 gi|240121128|ref|ZP_04734090.1| thymidylate synthase [Neisseria gonorrhoeae PID24-1]
 gi|240123956|ref|ZP_04736912.1| thymidylate synthase [Neisseria gonorrhoeae PID332]
 gi|240126156|ref|ZP_04739042.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|240128633|ref|ZP_04741294.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|254494147|ref|ZP_05107318.1| thymidylate synthase [Neisseria gonorrhoeae 1291]
 gi|260440061|ref|ZP_05793877.1| thymidylate synthase [Neisseria gonorrhoeae DGI2]
 gi|268595249|ref|ZP_06129416.1| thymidylate synthase [Neisseria gonorrhoeae 35/02]
 gi|268597414|ref|ZP_06131581.1| thymidylate synthase [Neisseria gonorrhoeae FA19]
 gi|268599588|ref|ZP_06133755.1| thymidylate synthase [Neisseria gonorrhoeae MS11]
 gi|268601794|ref|ZP_06135961.1| thymidylate synthase [Neisseria gonorrhoeae PID18]
 gi|268604126|ref|ZP_06138293.1| thymidylate synthase [Neisseria gonorrhoeae PID1]
 gi|268682584|ref|ZP_06149446.1| thymidylate synthase [Neisseria gonorrhoeae PID332]
 gi|268684744|ref|ZP_06151606.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268687023|ref|ZP_06153885.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|75507349|sp|Q5F732|TYSY_NEIG1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|59718600|gb|AAW90005.1| putative thymidylate synthase B [Neisseria gonorrhoeae FA 1090]
 gi|226513187|gb|EEH62532.1| thymidylate synthase [Neisseria gonorrhoeae 1291]
 gi|268548638|gb|EEZ44056.1| thymidylate synthase [Neisseria gonorrhoeae 35/02]
 gi|268551202|gb|EEZ46221.1| thymidylate synthase [Neisseria gonorrhoeae FA19]
 gi|268583719|gb|EEZ48395.1| thymidylate synthase [Neisseria gonorrhoeae MS11]
 gi|268585925|gb|EEZ50601.1| thymidylate synthase [Neisseria gonorrhoeae PID18]
 gi|268588257|gb|EEZ52933.1| thymidylate synthase [Neisseria gonorrhoeae PID1]
 gi|268622868|gb|EEZ55268.1| thymidylate synthase [Neisseria gonorrhoeae PID332]
 gi|268625028|gb|EEZ57428.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268627307|gb|EEZ59707.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035]
          Length = 264

 Score =  397 bits (1021), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAVVSV 264


>gi|194099130|ref|YP_002002215.1| thymidylate synthase [Neisseria gonorrhoeae NCCP11945]
 gi|291043350|ref|ZP_06569073.1| thymidylate synthase [Neisseria gonorrhoeae DGI2]
 gi|193934420|gb|ACF30244.1| thymidylate synthase [Neisseria gonorrhoeae NCCP11945]
 gi|291012956|gb|EFE04939.1| thymidylate synthase [Neisseria gonorrhoeae DGI2]
 gi|317164678|gb|ADV08219.1| thymidylate synthase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 266

 Score =  397 bits (1021), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAVVSV 266


>gi|293398657|ref|ZP_06642835.1| thymidylate synthase [Neisseria gonorrhoeae F62]
 gi|291611128|gb|EFF40225.1| thymidylate synthase [Neisseria gonorrhoeae F62]
          Length = 265

 Score =  397 bits (1021), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 2   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 62  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 122 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 181

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 182 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 241

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 242 AFKFEDFELEGYDPHPHIKAVVSV 265


>gi|325130730|gb|EGC53467.1| thymidylate synthase [Neisseria meningitidis OX99.30304]
 gi|325136647|gb|EGC59247.1| thymidylate synthase [Neisseria meningitidis M0579]
 gi|325201639|gb|ADY97093.1| thymidylate synthase [Neisseria meningitidis M01-240149]
 gi|325208626|gb|ADZ04078.1| thymidylate synthase [Neisseria meningitidis NZ-05/33]
          Length = 264

 Score =  397 bits (1020), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264


>gi|297250452|ref|ZP_06934052.1| thymidylate synthase [Neisseria polysaccharea ATCC 43768]
 gi|296838954|gb|EFH22892.1| thymidylate synthase [Neisseria polysaccharea ATCC 43768]
          Length = 266

 Score =  397 bits (1020), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RH +  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHALDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEVGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266


>gi|15677556|ref|NP_274712.1| thymidylate synthase [Neisseria meningitidis MC58]
 gi|304386810|ref|ZP_07369075.1| thymidylate synthase [Neisseria meningitidis ATCC 13091]
 gi|20455363|sp|Q9JY72|TYSY_NEIMB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|7226964|gb|AAF42056.1| thymidylate synthase [Neisseria meningitidis MC58]
 gi|261392072|emb|CAX49566.1| thymidylate synthase (TS; TSase) [Neisseria meningitidis 8013]
 gi|304339119|gb|EFM05208.1| thymidylate synthase [Neisseria meningitidis ATCC 13091]
 gi|316984858|gb|EFV63815.1| thymidylate synthase [Neisseria meningitidis H44/76]
 gi|325128751|gb|EGC51614.1| thymidylate synthase [Neisseria meningitidis N1568]
 gi|325140830|gb|EGC63340.1| thymidylate synthase [Neisseria meningitidis CU385]
 gi|325199699|gb|ADY95154.1| thymidylate synthase [Neisseria meningitidis H44/76]
 gi|325204666|gb|ADZ00120.1| thymidylate synthase [Neisseria meningitidis M01-240355]
          Length = 264

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++++ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L  Y+PH  I A VSV
Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264


>gi|261378912|ref|ZP_05983485.1| thymidylate synthase [Neisseria cinerea ATCC 14685]
 gi|269144729|gb|EEZ71147.1| thymidylate synthase [Neisseria cinerea ATCC 14685]
          Length = 264

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 179/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDSGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R  R LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLGRECRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L  Y+PH  I A VSV
Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264


>gi|306843264|ref|ZP_07475873.1| thymidylate synthase [Brucella sp. BO2]
 gi|306286530|gb|EFM58113.1| thymidylate synthase [Brucella sp. BO2]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 220/264 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ LR
Sbjct: 61  WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ANPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRMPKKLPVMHINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264


>gi|259090368|pdb|3IX6|A Chain A, Crystal Structure Of Thymidylate Synthase Thya From
           Brucella Melitensis
 gi|259090369|pdb|3IX6|B Chain B, Crystal Structure Of Thymidylate Synthase Thya From
           Brucella Melitensis
          Length = 360

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 97  MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 156

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 157 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 216

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 217 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 276

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL 
Sbjct: 277 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 336

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 337 AFRFEDFRLDGYEADPTIKAPIAV 360


>gi|308389827|gb|ADO32147.1| thymidylate synthase [Neisseria meningitidis alpha710]
          Length = 266

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY+NHFEQA LQL R P  LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHFEQAALQLEREPCALPVMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266


>gi|325134758|gb|EGC57395.1| thymidylate synthase [Neisseria meningitidis M13399]
 gi|325145101|gb|EGC67384.1| thymidylate synthase [Neisseria meningitidis M01-240013]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY+NHFEQA LQL R P  LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHFEQAALQLEREPCALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264


>gi|261365658|ref|ZP_05978541.1| thymidylate synthase [Neisseria mucosa ATCC 25996]
 gi|288565822|gb|EFC87382.1| thymidylate synthase [Neisseria mucosa ATCC 25996]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 179/264 (67%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G+D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYHDLMRHVLENGTDKSDRTGTGTRSVFGYQMRFDLSQGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q GEFIHT GD HLY+NHFEQA LQLSR  R LP M INP + DL 
Sbjct: 181 YALLTMMIAQVCGLQAGEFIHTFGDAHLYSNHFEQAKLQLSRDFRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A V+V
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVAV 264


>gi|218768724|ref|YP_002343236.1| thymidylate synthase [Neisseria meningitidis Z2491]
 gi|20455362|sp|Q9JT57|TYSY_NEIMA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|121052732|emb|CAM09075.1| thymidylate synthase [Neisseria meningitidis Z2491]
 gi|319410956|emb|CBY91352.1| thymidylate synthase (TS; TSase) [Neisseria meningitidis WUE 2594]
          Length = 264

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++++ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264


>gi|254671837|emb|CBA03996.1| Thymidylate synthase [Neisseria meningitidis alpha275]
          Length = 266

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++++ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266


>gi|225076554|ref|ZP_03719753.1| hypothetical protein NEIFLAOT_01602 [Neisseria flavescens
           NRL30031/H210]
 gi|224952117|gb|EEG33326.1| hypothetical protein NEIFLAOT_01602 [Neisseria flavescens
           NRL30031/H210]
          Length = 266

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 216/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL +GFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGRGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR  R+LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRSLPTMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266


>gi|71906233|ref|YP_283820.1| thymidylate synthase [Dechloromonas aromatica RCB]
 gi|123733364|sp|Q47II1|TYSY_DECAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|71845854|gb|AAZ45350.1| thymidylate synthase [Dechloromonas aromatica RCB]
          Length = 264

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FG+QMRFDLS+GFP++TTKK+H KS++HELL
Sbjct: 1   MQPYLDLMRHVLDNGNDKSDRTGTGTRSVFGWQMRFDLSQGFPVMTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  +GV IWDEWAD++G+LGP+YG QWR W   DG VIDQI+ +V SL+
Sbjct: 61  WFIQGDTNIKYLQENGVKIWDEWADENGDLGPVYGKQWRRWETPDGRVIDQITQLVNSLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN   +D MALPPCHCLFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNPGDVDNMALPPCHCLFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+L TMMLA V G+Q GEF+HT GD HLY+NHFEQA LQLSR  R LP M INP + DL 
Sbjct: 181 YALFTMMLAQVCGYQPGEFVHTFGDAHLYSNHFEQAKLQLSRDTRPLPTMWINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  Y+PH  I A V+V
Sbjct: 241 AFRFEDFRLEGYDPHPHIPAPVAV 264


>gi|226939715|ref|YP_002794788.1| thymidylate synthase [Laribacter hongkongensis HLHK9]
 gi|254790240|sp|C1D4I5|TYSY_LARHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226714641|gb|ACO73779.1| TysY [Laribacter hongkongensis HLHK9]
          Length = 264

 Score =  395 bits (1014), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 180/264 (68%), Positives = 216/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L++HV+  G+D+ DRTG GTRS FGYQMRFDL++GFPLLTTKK+H +S+VHELL
Sbjct: 1   MKAYLELMQHVLDHGTDKADRTGTGTRSVFGYQMRFDLAQGFPLLTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G+LGP+YG QWRSWP  DG  IDQIS ++  +R
Sbjct: 61  WFLAGDTNIRYLKDNGVRIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQISGLLDMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPALVDDMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G Q GEF+HT GD HLY+NHFEQA LQL R PR LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVTGLQPGEFVHTFGDAHLYSNHFEQARLQLQREPRALPVMKLNPVVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDFTL  Y+PH  I A+VSV
Sbjct: 241 AFRFEDFTLEGYDPHPHIKAEVSV 264


>gi|254719433|ref|ZP_05181244.1| thymidylate synthase [Brucella sp. 83/13]
 gi|265984437|ref|ZP_06097172.1| thymidylate synthase [Brucella sp. 83/13]
 gi|306839209|ref|ZP_07472026.1| thymidylate synthase [Brucella sp. NF 2653]
 gi|306844297|ref|ZP_07476889.1| thymidylate synthase [Brucella sp. BO1]
 gi|264663029|gb|EEZ33290.1| thymidylate synthase [Brucella sp. 83/13]
 gi|306275369|gb|EFM57110.1| thymidylate synthase [Brucella sp. BO1]
 gi|306405756|gb|EFM62018.1| thymidylate synthase [Brucella sp. NF 2653]
          Length = 264

 Score =  395 bits (1014), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 220/264 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 61  WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ANPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264


>gi|319637791|ref|ZP_07992557.1| thymidylate synthase [Neisseria mucosa C102]
 gi|317400946|gb|EFV81601.1| thymidylate synthase [Neisseria mucosa C102]
          Length = 264

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 179/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV+  G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKENNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR  R+LP M INP I DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQARLQLSRDFRSLPTMKINPEIKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264


>gi|148560322|ref|YP_001259294.1| thymidylate synthase [Brucella ovis ATCC 25840]
 gi|166231694|sp|A5VRE7|TYSY_BRUO2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148371579|gb|ABQ61558.1| thymidylate synthase [Brucella ovis ATCC 25840]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDHGVDRDDRTGTGTRSAFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 61  WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264


>gi|190892527|ref|YP_001979069.1| thymidylate synthase [Rhizobium etli CIAT 652]
 gi|190697806|gb|ACE91891.1| thymidylate synthase protein [Rhizobium etli CIAT 652]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MQQYLDLLKHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGETNIGYLRDHGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPNSRRHIVSAWNPAEVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HT GD HLY+NHF+QA LQL+R P+ LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKSGDFVHTFGDAHLYHNHFDQAKLQLTRRPKPLPFMRINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF +EDF L  YE  A I A ++V
Sbjct: 241 SFTFEDFELIGYEADANIKAPIAV 264


>gi|161579483|ref|NP_296349.2| thymidylate synthase [Deinococcus radiodurans R1]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD LRH+   G+D+ DRTG GTRS FGYQMRFDLS+GFPL+TTK+VH KS+++ELL
Sbjct: 1   MKQYLDFLRHIRDHGTDKMDRTGTGTRSVFGYQMRFDLSEGFPLVTTKRVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSNV +L  HGV+IWDEWA + GELGP+YGVQWRSWPDY G  IDQIS +++ ++
Sbjct: 61  WFLRGDSNVRWLQEHGVTIWDEWAREGGELGPVYGVQWRSWPDYGGGQIDQISQVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ID+MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVAQIDEMALPPCHLLFQFYVADGKLSCQLYQRSADSFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFI T GD H+Y+NH EQ + QL R PR LP+M +NP + D+ 
Sbjct: 181 YALLTMMVAQVCGLEPGEFIWTGGDCHIYSNHMEQVERQLKREPRPLPKMRLNPAVKDMF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+YEDFTL  Y+PH  I A+V+V
Sbjct: 241 AFQYEDFTLEGYDPHPGIKAEVAV 264


>gi|319408804|emb|CBI82461.1| Thymidylate synthase [Bartonella schoenbuchensis R1]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 182/264 (68%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRF+L  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKVYLDLLSHVLSNGVDRSDRTGVGTRSIFGYQMRFNLQAGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+++L  HGVSIWDEWADKDG LGPIYG QWRSWP  DG  IDQIS+++ ++ 
Sbjct: 61  WFLRGDTNIAWLKEHGVSIWDEWADKDGNLGPIYGFQWRSWPAPDGRYIDQISNLLDTIN 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALI+ MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNPALIEDMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY NHFEQA  QLSR+P  LP M INP + DL 
Sbjct: 181 YALLTMMIAQVTGLKVGDFIHTLGDAHLYVNHFEQAKQQLSRTPGVLPVMFINPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +YE    I A V+V
Sbjct: 241 SFKFEDFNLLNYEAQPHIKAPVAV 264


>gi|17986891|ref|NP_539525.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|23502270|ref|NP_698397.1| thymidylate synthase [Brucella suis 1330]
 gi|62290293|ref|YP_222086.1| thymidylate synthase [Brucella abortus bv. 1 str. 9-941]
 gi|82700216|ref|YP_414790.1| thymidylate synthase [Brucella melitensis biovar Abortus 2308]
 gi|163843654|ref|YP_001628058.1| thymidylate synthase [Brucella suis ATCC 23445]
 gi|189024526|ref|YP_001935294.1| thymidylate synthase [Brucella abortus S19]
 gi|225627851|ref|ZP_03785888.1| thymidylate synthase [Brucella ceti str. Cudo]
 gi|225852881|ref|YP_002733114.1| thymidylate synthase [Brucella melitensis ATCC 23457]
 gi|237815800|ref|ZP_04594797.1| thymidylate synthase [Brucella abortus str. 2308 A]
 gi|254689595|ref|ZP_05152849.1| thymidylate synthase [Brucella abortus bv. 6 str. 870]
 gi|254694085|ref|ZP_05155913.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya]
 gi|254697737|ref|ZP_05159565.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254702121|ref|ZP_05163949.1| thymidylate synthase [Brucella suis bv. 5 str. 513]
 gi|254704658|ref|ZP_05166486.1| thymidylate synthase [Brucella suis bv. 3 str. 686]
 gi|254708073|ref|ZP_05169901.1| thymidylate synthase [Brucella pinnipedialis M163/99/10]
 gi|254710443|ref|ZP_05172254.1| thymidylate synthase [Brucella pinnipedialis B2/94]
 gi|254714436|ref|ZP_05176247.1| thymidylate synthase [Brucella ceti M644/93/1]
 gi|254717333|ref|ZP_05179144.1| thymidylate synthase [Brucella ceti M13/05/1]
 gi|254730626|ref|ZP_05189204.1| thymidylate synthase [Brucella abortus bv. 4 str. 292]
 gi|256031937|ref|ZP_05445551.1| thymidylate synthase [Brucella pinnipedialis M292/94/1]
 gi|256045031|ref|ZP_05447932.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061458|ref|ZP_05451602.1| thymidylate synthase [Brucella neotomae 5K33]
 gi|256113948|ref|ZP_05454736.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether]
 gi|256160135|ref|ZP_05457829.1| thymidylate synthase [Brucella ceti M490/95/1]
 gi|256255341|ref|ZP_05460877.1| thymidylate synthase [Brucella ceti B1/94]
 gi|256257844|ref|ZP_05463380.1| thymidylate synthase [Brucella abortus bv. 9 str. C68]
 gi|256263636|ref|ZP_05466168.1| thymidylate synthase [Brucella melitensis bv. 2 str. 63/9]
 gi|256369815|ref|YP_003107326.1| thymidylate synthase [Brucella microti CCM 4915]
 gi|260169073|ref|ZP_05755884.1| thymidylate synthase [Brucella sp. F5/99]
 gi|260546835|ref|ZP_05822574.1| thymidylate synthase [Brucella abortus NCTC 8038]
 gi|260565371|ref|ZP_05835855.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|260566096|ref|ZP_05836566.1| thymidylate synthase [Brucella suis bv. 4 str. 40]
 gi|260755122|ref|ZP_05867470.1| thymidylate synthase [Brucella abortus bv. 6 str. 870]
 gi|260758341|ref|ZP_05870689.1| thymidylate synthase [Brucella abortus bv. 4 str. 292]
 gi|260762167|ref|ZP_05874510.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884134|ref|ZP_05895748.1| thymidylate synthase [Brucella abortus bv. 9 str. C68]
 gi|261214383|ref|ZP_05928664.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya]
 gi|261219162|ref|ZP_05933443.1| thymidylate synthase [Brucella ceti M13/05/1]
 gi|261222542|ref|ZP_05936823.1| thymidylate synthase [Brucella ceti B1/94]
 gi|261315574|ref|ZP_05954771.1| thymidylate synthase [Brucella pinnipedialis M163/99/10]
 gi|261318013|ref|ZP_05957210.1| thymidylate synthase [Brucella pinnipedialis B2/94]
 gi|261322224|ref|ZP_05961421.1| thymidylate synthase [Brucella ceti M644/93/1]
 gi|261325464|ref|ZP_05964661.1| thymidylate synthase [Brucella neotomae 5K33]
 gi|261752691|ref|ZP_05996400.1| thymidylate synthase [Brucella suis bv. 5 str. 513]
 gi|261755351|ref|ZP_05999060.1| thymidylate synthase [Brucella suis bv. 3 str. 686]
 gi|261758577|ref|ZP_06002286.1| thymidylate synthase [Brucella sp. F5/99]
 gi|265989043|ref|ZP_06101600.1| thymidylate synthase [Brucella pinnipedialis M292/94/1]
 gi|265991458|ref|ZP_06104015.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995295|ref|ZP_06107852.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether]
 gi|265998507|ref|ZP_06111064.1| thymidylate synthase [Brucella ceti M490/95/1]
 gi|294852725|ref|ZP_06793398.1| thymidylate synthase [Brucella sp. NVSL 07-0026]
 gi|297248681|ref|ZP_06932399.1| thymidylate synthase [Brucella abortus bv. 5 str. B3196]
 gi|54039795|sp|P67043|TYSY_BRUSU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54042281|sp|P67042|TYSY_BRUME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|75505250|sp|Q57CA9|TYSY_BRUAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123727399|sp|Q2YS22|TYSY_BRUA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036929|sp|B0CHI7|TYSY_BRUSI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790231|sp|C0RE38|TYSY_BRUMB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|17982532|gb|AAL51789.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|23348244|gb|AAN30312.1| thymidylate synthase [Brucella suis 1330]
 gi|62196425|gb|AAX74725.1| ThyA, thymidylate synthase [Brucella abortus bv. 1 str. 9-941]
 gi|82616317|emb|CAJ11374.1| Thymidylate synthase [Brucella melitensis biovar Abortus 2308]
 gi|163674377|gb|ABY38488.1| Thymidylate synthase [Brucella suis ATCC 23445]
 gi|189020098|gb|ACD72820.1| Thymidylate synthase [Brucella abortus S19]
 gi|225617856|gb|EEH14901.1| thymidylate synthase [Brucella ceti str. Cudo]
 gi|225641246|gb|ACO01160.1| thymidylate synthase [Brucella melitensis ATCC 23457]
 gi|237789098|gb|EEP63309.1| thymidylate synthase [Brucella abortus str. 2308 A]
 gi|255999978|gb|ACU48377.1| thymidylate synthase [Brucella microti CCM 4915]
 gi|260095885|gb|EEW79762.1| thymidylate synthase [Brucella abortus NCTC 8038]
 gi|260151439|gb|EEW86533.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|260155614|gb|EEW90694.1| thymidylate synthase [Brucella suis bv. 4 str. 40]
 gi|260668659|gb|EEX55599.1| thymidylate synthase [Brucella abortus bv. 4 str. 292]
 gi|260672599|gb|EEX59420.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675230|gb|EEX62051.1| thymidylate synthase [Brucella abortus bv. 6 str. 870]
 gi|260873662|gb|EEX80731.1| thymidylate synthase [Brucella abortus bv. 9 str. C68]
 gi|260915990|gb|EEX82851.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya]
 gi|260921126|gb|EEX87779.1| thymidylate synthase [Brucella ceti B1/94]
 gi|260924251|gb|EEX90819.1| thymidylate synthase [Brucella ceti M13/05/1]
 gi|261294914|gb|EEX98410.1| thymidylate synthase [Brucella ceti M644/93/1]
 gi|261297236|gb|EEY00733.1| thymidylate synthase [Brucella pinnipedialis B2/94]
 gi|261301444|gb|EEY04941.1| thymidylate synthase [Brucella neotomae 5K33]
 gi|261304600|gb|EEY08097.1| thymidylate synthase [Brucella pinnipedialis M163/99/10]
 gi|261738561|gb|EEY26557.1| thymidylate synthase [Brucella sp. F5/99]
 gi|261742444|gb|EEY30370.1| thymidylate synthase [Brucella suis bv. 5 str. 513]
 gi|261745104|gb|EEY33030.1| thymidylate synthase [Brucella suis bv. 3 str. 686]
 gi|262553131|gb|EEZ08965.1| thymidylate synthase [Brucella ceti M490/95/1]
 gi|262766408|gb|EEZ12197.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether]
 gi|263002242|gb|EEZ14817.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093689|gb|EEZ17694.1| thymidylate synthase [Brucella melitensis bv. 2 str. 63/9]
 gi|264661240|gb|EEZ31501.1| thymidylate synthase [Brucella pinnipedialis M292/94/1]
 gi|294821314|gb|EFG38313.1| thymidylate synthase [Brucella sp. NVSL 07-0026]
 gi|297175850|gb|EFH35197.1| thymidylate synthase [Brucella abortus bv. 5 str. B3196]
 gi|326409422|gb|ADZ66487.1| Thymidylate synthase [Brucella melitensis M28]
 gi|326539129|gb|ADZ87344.1| thymidylate synthase [Brucella melitensis M5-90]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 61  WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264


>gi|218463520|ref|ZP_03503611.1| thymidylate synthase [Rhizobium etli Kim 5]
          Length = 264

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 175/264 (66%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HVI+ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MQQYLDLLKHVIENGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ + 
Sbjct: 61  WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLIKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPNSRRHIVSAWNPAEVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY+NHFEQA LQL+R P+ LP M INP++ D+ 
Sbjct: 181 YALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFEQAKLQLTRRPKPLPFMRINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L  YE  A+I A ++V
Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264


>gi|294669491|ref|ZP_06734558.1| hypothetical protein NEIELOOT_01389 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308404|gb|EFE49647.1| hypothetical protein NEIELOOT_01389 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 264

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 174/264 (65%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L+RHV++ G D+ DRTG GTRS FGYQMRFDL++GFPLLTTKK+H +S++HELL
Sbjct: 1   MKQYLGLMRHVMQNGHDKSDRTGTGTRSVFGYQMRFDLAQGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q GEF+HTLGD H+Y+NHFEQ +LQL+R PR LP+M +N  + DL 
Sbjct: 181 YALLTMMIAQVCGLQPGEFVHTLGDAHIYSNHFEQTELQLAREPRALPKMKLNHAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y+PH  I A V+V
Sbjct: 241 DFKFEDFELADYDPHPHIKAAVAV 264


>gi|163758991|ref|ZP_02166077.1| thymidylate synthase protein [Hoeflea phototrophica DFL-43]
 gi|162283395|gb|EDQ33680.1| thymidylate synthase protein [Hoeflea phototrophica DFL-43]
          Length = 264

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLR V+  G DR DRTG GT S FG+QMRFDL+ GFP LTTKK+H +S++HELL
Sbjct: 1   MQQYHDLLRLVLDQGFDRDDRTGTGTLSVFGHQMRFDLAAGFPALTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +G+SIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGDTNIAYLKANGISIWDEWADENGDLGPVYGAQWRSWPAPDGTTIDQIANVVRQIE 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPSSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY NHF+QA LQLSR  RTLP M INP I DL 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDAHLYKNHFDQAHLQLSRESRTLPVMRINPEITDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F Y+DF L  Y+PH AI A ++V
Sbjct: 241 AFTYDDFKLEGYDPHPAISAPIAV 264


>gi|284799616|ref|ZP_05984412.2| thymidylate synthase [Neisseria subflava NJ9703]
 gi|284797529|gb|EFC52876.1| thymidylate synthase [Neisseria subflava NJ9703]
          Length = 303

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV+  G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL
Sbjct: 40  MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 99

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 100 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 159

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 160 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 219

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR  R LP M INP + DL 
Sbjct: 220 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRKLPTMKINPEVKDLF 279

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 280 AFKFEDFELEGYDPHPHIKAAVSV 303


>gi|6460459|gb|AAF12166.1|AE002092_4 thymidylate synthase [Deinococcus radiodurans R1]
          Length = 387

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           + QYLD LRH+   G+D+ DRTG GTRS FGYQMRFDLS+GFPL+TTK+VH KS+++ELL
Sbjct: 124 VKQYLDFLRHIRDHGTDKMDRTGTGTRSVFGYQMRFDLSEGFPLVTTKRVHLKSIIYELL 183

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSNV +L  HGV+IWDEWA + GELGP+YGVQWRSWPDY G  IDQIS +++ ++
Sbjct: 184 WFLRGDSNVRWLQEHGVTIWDEWAREGGELGPVYGVQWRSWPDYGGGQIDQISQVIEQIK 243

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ID+MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 244 TNPDSRRLIVSAWNVAQIDEMALPPCHLLFQFYVADGKLSCQLYQRSADSFLGVPFNIAS 303

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFI T GD H+Y+NH EQ + QL R PR LP+M +NP + D+ 
Sbjct: 304 YALLTMMVAQVCGLEPGEFIWTGGDCHIYSNHMEQVERQLKREPRPLPKMRLNPAVKDMF 363

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+YEDFTL  Y+PH  I A+V+V
Sbjct: 364 AFQYEDFTLEGYDPHPGIKAEVAV 387


>gi|153009122|ref|YP_001370337.1| thymidylate synthase [Ochrobactrum anthropi ATCC 49188]
 gi|166231721|sp|A6WZV4|TYSY_OCHA4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|151561010|gb|ABS14508.1| Thymidylate synthase [Ochrobactrum anthropi ATCC 49188]
          Length = 264

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G+DR DRTG GTRS FGYQMRF+L +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDNGTDRGDRTGTGTRSVFGYQMRFNLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GVSIWDEWADK+G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 61  WFLKGDTNIAYLKENGVSIWDEWADKNGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 GNPNSRRLIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y NHF+QA LQL+R P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVAGLKPGEFIHTLGDAHIYANHFDQARLQLTRIPKKLPTMWINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFQLEGYEADPTIKAPIAV 264


>gi|304392191|ref|ZP_07374133.1| thymidylate synthase [Ahrensia sp. R2A130]
 gi|303296420|gb|EFL90778.1| thymidylate synthase [Ahrensia sp. R2A130]
          Length = 272

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 175/264 (66%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G+DR DRTG GTRS FG+QMRFDL+ GFP++TTKK+H +S++ ELL
Sbjct: 9   MRAYLDLLQHILDNGTDRGDRTGTGTRSVFGHQMRFDLADGFPMVTTKKLHLRSIIIELL 68

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G SN++YL  + V IWDEWAD++GELGP+YGVQWRSWP  DG+ IDQI+++++ ++
Sbjct: 69  WFLKGSSNIAYLQDNKVRIWDEWADENGELGPVYGVQWRSWPKSDGSTIDQIANVIEQIK 128

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR +VSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIAS
Sbjct: 129 ANPNSRRLMVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSGDVFLGVPFNIAS 188

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD HLY NHF+QA  QLSR PR LPQM I+P++ D+ 
Sbjct: 189 YALLTMMVAQVTGLKPGEFIHTLGDAHLYANHFDQAREQLSREPRALPQMKIDPSVDDIF 248

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YE F L  Y+PH  I AKV+V
Sbjct: 249 GFEYEHFELTGYDPHPHIAAKVAV 272


>gi|121602325|ref|YP_989208.1| thymidylate synthase [Bartonella bacilliformis KC583]
 gi|166231691|sp|A1UTA5|TYSY_BARBK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120614502|gb|ABM45103.1| thymidylate synthase [Bartonella bacilliformis KC583]
          Length = 264

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 179/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G+DR DRTGVGTRS FGYQMRF+L +GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKAYLDLLSHVLNNGTDRSDRTGVGTRSVFGYQMRFNLQEGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADKDG LGP+YG QWRSWP  DG  IDQIS+++  + 
Sbjct: 61  WFLKGDTNIAWLKEHGVSIWDEWADKDGNLGPVYGYQWRSWPSSDGRYIDQISNLLAMIN 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN ALID+MALPPCHCLFQF V NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPNSRRLIVTAWNPALIDEMALPPCHCLFQFQVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA  QLSR+P  LP + INP + DL 
Sbjct: 181 YALLTMMIAQVTGLKVGDFIHTLGDAHLYSNHFEQAKQQLSRTPGILPLIRINPKVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +YE    I A V+V
Sbjct: 241 SFQFEDFELLNYEAQPHIKAPVAV 264


>gi|161619346|ref|YP_001593233.1| thymidylate synthase [Brucella canis ATCC 23365]
 gi|189036928|sp|A9M657|TYSY_BRUC2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|161336157|gb|ABX62462.1| Thymidylate synthase [Brucella canis ATCC 23365]
          Length = 264

 Score =  391 bits (1004), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 175/264 (66%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 61  WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SR  IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPQSRSLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264


>gi|209550125|ref|YP_002282042.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535881|gb|ACI55816.1| Thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 264

 Score =  390 bits (1003), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 175/264 (66%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+ TTKK+H +S++HELL
Sbjct: 1   MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLQEGFPVTTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGETNIGYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLGIPFNIAS
Sbjct: 121 NNPNSRRHIVSAWNPAEVDQMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M INP++ D+ 
Sbjct: 181 YALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF ++DF L  YE  A+I A ++V
Sbjct: 241 SFTFDDFELIGYEADASIKAPIAV 264


>gi|34496482|ref|NP_900697.1| thymidylate synthase [Chromobacterium violaceum ATCC 12472]
 gi|62901352|sp|Q7NZ95|TYSY_CHRVO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|34102336|gb|AAQ58702.1| thymidylate synthase [Chromobacterium violaceum ATCC 12472]
          Length = 264

 Score =  390 bits (1003), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 175/264 (66%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV++ G D+ DRTG GTRS FGYQMRFDL+ GFPL+TTKK H +S++HELL
Sbjct: 1   MQQYLDLMRHVLEHGHDKADRTGTGTRSVFGYQMRFDLAAGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQIS ++  ++
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQISQLLDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDQMALPPCHSLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q G+F+HTLGD HLY+NH EQA LQL+R PR LP M +NP + DL 
Sbjct: 181 YALLTMMVAQVCGLQPGDFVHTLGDAHLYSNHLEQARLQLTRDPRPLPTMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++DF L  Y+PH  I A+V+V
Sbjct: 241 AFTFDDFALEGYDPHPHIKAQVAV 264


>gi|319782912|ref|YP_004142388.1| thymidylate synthase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168800|gb|ADV12338.1| thymidylate synthase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 264

 Score =  390 bits (1002), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 175/264 (66%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV+  G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL
Sbjct: 1   MRQYLDLLQHVLDNGADRGDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  HGVSIWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+++++ +R
Sbjct: 61  WFLAGDTNIKYLTDHGVSIWDEWADENGDLGPVYGKQWRSWPDGHGGSIDQIANLLKEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++ MALPPCHCLFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSQGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA  QL R+PRTLP M INP + DL 
Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLRRTPRTLPTMWINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L +Y   A+I A ++V
Sbjct: 241 AFRFEDFRLENYVADASIKAPIAV 264


>gi|239832277|ref|ZP_04680606.1| thymidylate synthase [Ochrobactrum intermedium LMG 3301]
 gi|239824544|gb|EEQ96112.1| thymidylate synthase [Ochrobactrum intermedium LMG 3301]
          Length = 307

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 174/264 (65%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRF+L +GFP+LTTKK+H +S++HELL
Sbjct: 44  MRTYLDLLQHVLDNGVDRGDRTGTGTRSVFGYQMRFNLEEGFPVLTTKKLHLRSIIHELL 103

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 104 WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 163

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 164 GNPNSRRLIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 223

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HTLGD H+Y NHF+QA  QL+R+P+ LPQM INP++ DL 
Sbjct: 224 YALLTMMIAQVTGLKPGEFVHTLGDAHIYANHFDQAREQLARTPKKLPQMWINPDVKDLF 283

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 284 AFRFEDFRLEGYEADPTIKAPIAV 307


>gi|86358403|ref|YP_470295.1| thymidylate synthase [Rhizobium etli CFN 42]
 gi|123724761|sp|Q2K6G8|TYSY_RHIEC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|86282505|gb|ABC91568.1| thymidylate synthase protein [Rhizobium etli CFN 42]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S+VHELL
Sbjct: 1   MQQYLDLLAHVMEKGSDRGDRTGTGTRSVFGYQMRFDLGEGFPVLTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPNSRRHIVSAWNPAEVDQMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLKGGDFVHTLGDAHLYHNHFDQAKLQLTRRPKPLPFMRINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L  YE  A+I A ++V
Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264


>gi|238021900|ref|ZP_04602326.1| hypothetical protein GCWU000324_01804 [Kingella oralis ATCC 51147]
 gi|237866514|gb|EEP67556.1| hypothetical protein GCWU000324_01804 [Kingella oralis ATCC 51147]
          Length = 264

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV++ G  + DRTG GTRS FGYQMRFDLS+GFP LTTKK+H KS++HELL
Sbjct: 1   MQQYLDLMRHVLQNGVTKSDRTGTGTRSVFGYQMRFDLSQGFPALTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G+LG +YG QWRSW   +G  IDQI ++VQ ++
Sbjct: 61  WFLSGDTNIRYLKENGVRIWDEWADENGDLGRVYGAQWRSWRGANGETIDQIRNLVQQIQ 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNPAEVDSMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMMLA V G Q GEFIHTLGD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLTMMLAQVCGLQAGEFIHTLGDAHLYLNHLEQAQLQLTREPRPLPKMHINPDVRDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR++DF L  Y+PH  I A+VSV
Sbjct: 241 AFRFDDFELADYDPHPHIKAQVSV 264


>gi|325266347|ref|ZP_08133025.1| thymidylate synthase [Kingella denitrificans ATCC 33394]
 gi|324982140|gb|EGC17774.1| thymidylate synthase [Kingella denitrificans ATCC 33394]
          Length = 264

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 174/264 (65%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV+  G+D+ DRTG GTRS FGYQMRF+L+ GFP+LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLQHVLDNGTDKSDRTGTGTRSVFGYQMRFNLADGFPVLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G+LG +YG QWRSW   DG  +DQI+++V+ +R
Sbjct: 61  WFLAGDTNIRYLKENGVRIWDEWADENGDLGRVYGAQWRSWRGADGETVDQIANVVRQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A +D MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QTPDSRRLIVSAWNPAEVDDMALPPCHALFQFYVANGQLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q GEF+HTLGD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLTMMVAQVCGLQAGEFVHTLGDAHLYQNHLEQARLQLTREPRALPKMHINPDVRDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+++DFTL  Y+PH  I A+VSV
Sbjct: 241 AFKFDDFTLSDYDPHPHIKAEVSV 264


>gi|39936555|ref|NP_948831.1| thymidylate synthase [Rhodopseudomonas palustris CGA009]
 gi|62901322|sp|Q6N447|TYSY_RHOPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|39650411|emb|CAE28934.1| thymidylate synthase [Rhodopseudomonas palustris CGA009]
          Length = 264

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 172/264 (65%), Positives = 216/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  ++  G+++ DRTG GT S FG+QMRFDL+ GFP+LTTK++  K++VHELL
Sbjct: 1   MIQYQDLLERILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGGSIDQIANVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLMVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEF+HTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ 
Sbjct: 181 YALLTLMVAQVTGLKPGEFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDFTL  Y+PH  I A+V+V
Sbjct: 241 GFRYEDFTLTGYDPHPHIKAEVAV 264


>gi|146342419|ref|YP_001207467.1| thymidylate synthase [Bradyrhizobium sp. ORS278]
 gi|166231693|sp|A4YZC4|TYSY_BRASO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|146195225|emb|CAL79250.1| Thymidylate synthase (TS) (TSase) [Bradyrhizobium sp. ORS278]
          Length = 264

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 216/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL  ++  G+ + DRTG GT S FG+QMRF+L+ GFP++TTK++  K++VHELL
Sbjct: 1   MHQYHDLLERILSDGAQKHDRTGTGTLSVFGHQMRFNLAAGFPMVTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQIS++V  +R
Sbjct: 61  WFLKGDTNIKYLHDHGVTIWDEWADANGDLGPVYGYQWRSWPTSDGGQIDQISNVVDMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+H+ GDVHLY+NH EQA LQLSR+PR LP M +NP++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKLGEFVHSFGDVHLYSNHIEQARLQLSRTPRPLPTMTLNPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF L  Y+PH  I A+V+V
Sbjct: 241 AFRYEDFALAGYDPHPHIKAEVAV 264


>gi|288927630|ref|ZP_06421477.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330464|gb|EFC69048.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 264

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 174/264 (65%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ ++  G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLQRIVNEGTRKEDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSWP+Y+G  +DQI  IV +L+
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYNGGHVDQIQDIVNALK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+MALPPCHCLFQFYV NGKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 NNPDSRRMIVSAWNVAEVDQMALPPCHCLFQFYVANGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHT GD HLY NH EQA  QL R+PRTLP+M+INPN+  + 
Sbjct: 181 YALLTMMMAQVSGLKPGDFIHTTGDTHLYLNHLEQAKEQLKRTPRTLPRMVINPNVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+Y+DFTL  Y+P   I A+VSV
Sbjct: 241 DFKYDDFTLEGYDPLPHIKAEVSV 264


>gi|192292373|ref|YP_001992978.1| thymidylate synthase [Rhodopseudomonas palustris TIE-1]
 gi|192286122|gb|ACF02503.1| Thymidylate synthase [Rhodopseudomonas palustris TIE-1]
          Length = 264

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 172/264 (65%), Positives = 216/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  ++  G+++ DRTG GT S FG+QMRFDL+ GFP+LTTK++  K++VHELL
Sbjct: 1   MIQYQDLLERILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGGSIDQIANVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLMVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEF+HTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ 
Sbjct: 181 YALLTLMVAQVTGLKPGEFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTINPAVNDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDFTL  Y+PH  I A+V+V
Sbjct: 241 GFRYEDFTLTGYDPHPHIKAEVAV 264


>gi|288801490|ref|ZP_06406942.1| thymidylate synthase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331571|gb|EFC70057.1| thymidylate synthase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 264

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 174/264 (65%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H+I  G+ + DRTG GT+S FGYQMRF+L  GFPLLTTKK+H KS++HELL
Sbjct: 1   MKAYLDLLQHIINNGATKGDRTGTGTKSVFGYQMRFNLEDGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSWP+Y G  IDQI+ +V  ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYKGGTIDQITQVVDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A +D+MALPPCHCLFQFYV N KLS QLYQRS D FLG+PFNIAS
Sbjct: 121 NNPNSRRMIVTAWNPAEVDEMALPPCHCLFQFYVANNKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLL MM+A V G++ GEF++T GD HLY NH EQA LQL R+PRTLP+M INP++ D+ 
Sbjct: 181 YSLLLMMVAQVTGYEPGEFVYTTGDTHLYLNHLEQAQLQLQRTPRTLPKMRINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDFTL  Y P+  I A+VSV
Sbjct: 241 SFKYEDFTLEDYNPYDHIKAQVSV 264


>gi|224826342|ref|ZP_03699444.1| Thymidylate synthase [Lutiella nitroferrum 2002]
 gi|224601443|gb|EEG07624.1| Thymidylate synthase [Lutiella nitroferrum 2002]
          Length = 264

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G  + DRTG GT S FGYQMRFDL+ GFPLLTTKK+H KS+VHELL
Sbjct: 1   MKQYLDLMRHVREHGHYKSDRTGTGTLSVFGYQMRFDLADGFPLLTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G LGP+YG QWRSWP  DG  +DQI+++V+ ++
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDEWADENGNLGPVYGYQWRSWPAPDGRHVDQIANVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HTLGD HLY+NH EQAD QL+R PR LP M INP + DL 
Sbjct: 181 YALLTMMVAQVCGLKPGEFVHTLGDAHLYSNHLEQADEQLAREPRPLPVMKINPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  Y+P   I AKV+V
Sbjct: 241 AFRFEDFELEGYDPMPHIKAKVAV 264


>gi|13471483|ref|NP_103049.1| thymidylate synthase [Mesorhizobium loti MAFF303099]
 gi|22096229|sp|Q98KH9|TYSY_RHILO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|14022225|dbj|BAB48835.1| thymidylate synthase [Mesorhizobium loti MAFF303099]
          Length = 264

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV+  G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL
Sbjct: 1   MRQYLDLLQHVLDNGADRSDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  HGV+IWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+ +++ +R
Sbjct: 61  WFLAGDTNIKYLTDHGVTIWDEWADENGDLGPVYGRQWRSWPDGHGGSIDQIAGLLKEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++ MALPPCHCLFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA  QL R+PR LP M INP + DL 
Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLQRTPRALPTMWINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L +Y   A+I A ++V
Sbjct: 241 AFRFEDFRLENYVADASIQAPIAV 264


>gi|2258280|gb|AAC45469.1| thymidylate synthase [Neisseria gonorrhoeae]
          Length = 267

 Score =  388 bits (996), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 176/265 (66%), Positives = 213/265 (80%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GT S FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTLSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWD-EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           WFL+GD+N+ YL  + VSIWD EWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ +
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G LSCQLYQRS D+FLG+PFNIA
Sbjct: 123 KKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGNLSCQLYQRSADIFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL
Sbjct: 183 SYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDL 242

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
            +F++EDF L  Y+PH  I A VSV
Sbjct: 243 FAFKFEDFELEGYDPHPHIKAVVSV 267


>gi|20455513|sp|O33380|TYSY_NEIGO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 265

 Score =  388 bits (996), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 176/265 (66%), Positives = 213/265 (80%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GT S FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTLSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWD-EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           WFL+GD+N+ YL  + VSIWD EWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ +
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQI 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G LSCQLYQRS D+FLG+PFNIA
Sbjct: 121 KKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGNLSCQLYQRSADIFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL
Sbjct: 181 SYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDL 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
            +F++EDF L  Y+PH  I A VSV
Sbjct: 241 FAFKFEDFELEGYDPHPHIKAVVSV 265


>gi|49474436|ref|YP_032478.1| thymidylate synthase [Bartonella quintana str. Toulouse]
 gi|62901308|sp|Q6FZ91|TYSY_BARQU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|49239940|emb|CAF26342.1| Thymidylate synthase [Bartonella quintana str. Toulouse]
          Length = 264

 Score =  388 bits (996), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 180/264 (68%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRFDL  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKTYLDLLSHVLNKGIDRTDRTGVGTRSVFGYQMRFDLQIGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV++L  HGVSIWDEWAD+ G LGPIYG QWRSWP  DG  IDQIS ++  ++
Sbjct: 61  WFLRGDTNVAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPASDGRYIDQISRLLTMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN ALI++MALPPCHC FQFYV + KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KTPDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADDKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA  QLSR P  LP M+INP++ DL 
Sbjct: 181 YALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRIPNALPSMLINPSVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +YE    I A V+V
Sbjct: 241 SFKFEDFELLNYEAQPHIKAPVAV 264


>gi|319899133|ref|YP_004159226.1| Thymidylate synthase [Bartonella clarridgeiae 73]
 gi|319403097|emb|CBI76655.1| Thymidylate synthase [Bartonella clarridgeiae 73]
          Length = 264

 Score =  388 bits (996), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 180/264 (68%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+K G DR DRTGVGTRS FGYQMRF+L  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKAYLDLLFHVLKNGIDRLDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADK+G+LGPIYG QWRSWP  DG  IDQIS+++  ++
Sbjct: 61  WFLKGDTNIAWLKEHGVSIWDEWADKEGDLGPIYGYQWRSWPAPDGRHIDQISNLLTMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+MALPPCHCLFQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHCLFQFYVAAGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A +   Q G+FIHT GD HLY NHFEQA+ QLSR+P  LP M+INP + DL 
Sbjct: 181 YALLTMMIAQITNLQVGDFIHTFGDAHLYLNHFEQAEQQLSRTPSALPLMLINPAVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF +EDF L +YE    I A V+V
Sbjct: 241 SFTFEDFELLNYEALPHIKAPVAV 264


>gi|260911785|ref|ZP_05918357.1| thymidylate synthase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634111|gb|EEX52229.1| thymidylate synthase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 264

 Score =  388 bits (996), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ ++  G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLQRIVNEGTRKEDRTGTGTLSVFGHQMRFNLQEGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSWP+Y+G  IDQI SI+ +L+
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYNGGHIDQIQSIINALK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+MALPPCHCLFQFYV  GKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRMIVSAWNVAEVDQMALPPCHCLFQFYVAKGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q G+FIHT GD HLY NH EQA  QL R+PR LP+M+INPN+  + 
Sbjct: 181 YALLTMMMAQVCGLQPGDFIHTTGDTHLYLNHLEQAKEQLKRTPRALPKMVINPNVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+Y++FTL  Y+P   I A+VSV
Sbjct: 241 DFKYDNFTLEGYDPLPHIKAEVSV 264


>gi|241205506|ref|YP_002976602.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240859396|gb|ACS57063.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 264

 Score =  387 bits (995), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M I P++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L  YE  A+I A ++V
Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264


>gi|116252999|ref|YP_768837.1| thymidylate synthase [Rhizobium leguminosarum bv. viciae 3841]
 gi|122988452|sp|Q1ME82|TYSY_RHIL3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|115257647|emb|CAK08744.1| putative thymidylate synthase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 264

 Score =  387 bits (995), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 172/264 (65%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNI+S
Sbjct: 121 NNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNISS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V+G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M I P++ D+ 
Sbjct: 181 YALLTMMVAQVVGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L  YE  A+I A ++V
Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264


>gi|291614975|ref|YP_003525132.1| thymidylate synthase [Sideroxydans lithotrophicus ES-1]
 gi|291585087|gb|ADE12745.1| thymidylate synthase [Sideroxydans lithotrophicus ES-1]
          Length = 264

 Score =  387 bits (995), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G+ + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL
Sbjct: 1   MRQYLDLMQHVLEHGTKKSDRTGTGTTSVFGYQMRFDLSQGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N  YL  +GVSIWDEWAD+ G LGP+YG QWRSW   DG VIDQI   V+ +R
Sbjct: 61  WFLQGSTNTKYLKDNGVSIWDEWADEQGNLGPVYGKQWRSWETVDGRVIDQIKVAVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G +YG+F+HT GD HLY+NH EQ   QLSR PR LP M INP++ D+ 
Sbjct: 181 YALLTMMMAQVCGLKYGDFVHTFGDAHLYSNHMEQTATQLSREPRALPTMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL  Y+PH AI A V+V
Sbjct: 241 GFKFEDFTLEGYDPHPAIKAPVAV 264


>gi|260462156|ref|ZP_05810400.1| thymidylate synthase [Mesorhizobium opportunistum WSM2075]
 gi|259032016|gb|EEW33283.1| thymidylate synthase [Mesorhizobium opportunistum WSM2075]
          Length = 264

 Score =  387 bits (994), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 172/264 (65%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV++ G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL
Sbjct: 1   MRQYLDLLQHVLENGADRGDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+++++ +R
Sbjct: 61  WFLAGDTNIKYLTDNGVSIWDEWADENGDLGPVYGKQWRSWPDGHGGSIDQIANLLKEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++ MALPPCHC+FQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCMFQFYVSEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA  QL R+PR LP M INP + DL 
Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLRRTPRALPTMWINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L +Y   A+I A ++V
Sbjct: 241 AFRFEDFRLENYVADASIKAPIAV 264


>gi|298370125|ref|ZP_06981441.1| thymidylate synthase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281585|gb|EFI23074.1| thymidylate synthase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 264

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 174/264 (65%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G D+ DRTG GTRS FGYQMRFDLSKGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYHDLMRHVLEHGIDKSDRTGTGTRSVFGYQMRFDLSKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++ + ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVTEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHTMFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEFIHT GD HLY+NH EQA LQLSR  R LP+M INP + DL 
Sbjct: 181 YALLTMMMAQVCRLKIGEFIHTFGDAHLYSNHMEQAKLQLSRDFRPLPEMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y PH  I A+V+V
Sbjct: 241 AFKFEDFELTGYNPHPHIKAEVAV 264


>gi|163868690|ref|YP_001609902.1| thymidylate synthase [Bartonella tribocorum CIP 105476]
 gi|189036927|sp|A9IW82|TYSY_BART1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|161018349|emb|CAK01907.1| Thymidylate synthase [Bartonella tribocorum CIP 105476]
          Length = 264

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL HV+  G DR DRTGVGTRS FGYQMRFDL  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKSYLALLSHVLNQGIDRTDRTGVGTRSIFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADK G LGP+YG QWRSWP  DG  IDQI ++++ ++
Sbjct: 61  WFLKGDTNIAWLKEHGVSIWDEWADKQGNLGPVYGYQWRSWPAPDGRHIDQIDNLLRMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN ALI++MALPPCHCLFQFY+D GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 EKPDSRRLIVSAWNPALIEEMALPPCHCLFQFYIDEGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHT GD HLY+NHFEQA  QLSR P  LP M INP + DL 
Sbjct: 181 YALLTMMIAQVSGLKVGDFIHTFGDAHLYSNHFEQAQYQLSRIPNALPCMRINPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +YE H  I A V++
Sbjct: 241 SFKFEDFELLNYEAHPHIKAPVAI 264


>gi|148257348|ref|YP_001241933.1| thymidylate synthase [Bradyrhizobium sp. BTAi1]
 gi|166231692|sp|A5EPD3|TYSY_BRASB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|146409521|gb|ABQ38027.1| thymidylate synthase [Bradyrhizobium sp. BTAi1]
          Length = 264

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL  ++  G+++ DRTG GT S FG+QMRF+L  GFPL+TTK++  K++VHELL
Sbjct: 1   MHQYHDLLERILSDGAEKHDRTGTGTLSVFGHQMRFNLGAGFPLVTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI++++  ++
Sbjct: 61  WFLRGDTNIKYLHDHGVTIWDEWADANGDLGPVYGYQWRSWPTPDGGHIDQIANVIDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVVNGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+H+ GDVHLY+NH EQA LQL+R+PR+LP M +NP++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGEFVHSFGDVHLYSNHVEQARLQLTRAPRSLPTMTLNPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF L  Y+PH  I A+V+V
Sbjct: 241 AFRYEDFALAGYDPHPHIKAEVAV 264


>gi|332970396|gb|EGK09388.1| thymidylate synthase [Kingella kingae ATCC 23330]
          Length = 264

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++HV+  G+D+ DRTG GTRS FGYQMRF+L+ GFP+LTTKK+H KS++HELL
Sbjct: 1   MKPYLDLMQHVLAHGNDKSDRTGTGTRSVFGYQMRFNLADGFPVLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IWDEWAD++G LG +YG QWRSW   +G  IDQI+++V+ ++
Sbjct: 61  WFLQGDTNIRYLQENGVKIWDEWADENGNLGRVYGAQWRSWRGANGETIDQIANLVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPAEVDDMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMMLA V G Q GEF+HTLGD HLY NH EQA LQLSR PR+LP+M INPN+ D+ 
Sbjct: 181 YALLTMMLAQVCGLQAGEFVHTLGDAHLYRNHLEQAQLQLSREPRSLPKMRINPNVQDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++DF L  Y+PH  I A VSV
Sbjct: 241 AFTFDDFELVDYDPHPHIKADVSV 264


>gi|315022907|gb|EFT35930.1| Thymidylate synthase [Riemerella anatipestifer RA-YM]
 gi|325336455|gb|ADZ12729.1| Thymidylate synthase [Riemerella anatipestifer RA-GD]
          Length = 264

 Score =  385 bits (988), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 172/264 (65%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL
Sbjct: 1   MQNYLDLLQHILDHGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ +GVSIWDEWAD +G LGP+YG QWRSW   +G VIDQIS ++  ++
Sbjct: 61  WFLKGDTNIKYLNDNGVSIWDEWADDNGNLGPVYGAQWRSWKGANGKVIDQISEVIHQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A I  MAL PCH LFQFYV +G+LS QLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNAAEIPNMALAPCHALFQFYVADGRLSLQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q GE+IH+ GDVH+YNNHFEQ   QLSR PR LP M +NP++ DL 
Sbjct: 181 YTLLTMMVAQVCGLQVGEYIHSFGDVHIYNNHFEQVQKQLSREPRPLPTMKLNPSVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +Y PH+ I A V+V
Sbjct: 241 DFKFEDFTLENYHPHSGIKAPVAV 264


>gi|313206101|ref|YP_004045278.1| thymidylate synthase [Riemerella anatipestifer DSM 15868]
 gi|312445417|gb|ADQ81772.1| thymidylate synthase [Riemerella anatipestifer DSM 15868]
          Length = 264

 Score =  385 bits (988), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 172/264 (65%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL
Sbjct: 1   MQNYLDLLQHILDHGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ +GVSIWDEWAD +G LGP+YG QWRSW   +G VIDQIS ++  ++
Sbjct: 61  WFLKGDTNIKYLNDNGVSIWDEWADDNGNLGPVYGAQWRSWKGANGKVIDQISEVIHQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A I  MAL PCH LFQFYV +G+LS QLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNAAEIPNMALAPCHALFQFYVADGRLSLQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q GE+IH+ GDVH+YNNHFEQ   QLSR PR LP M +NP++ DL 
Sbjct: 181 YALLTMMVAQVCGLQVGEYIHSFGDVHIYNNHFEQVQKQLSREPRPLPTMKLNPSVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +Y PH+ I A V+V
Sbjct: 241 DFKFEDFTLENYHPHSGIKAPVAV 264


>gi|255531326|ref|YP_003091698.1| thymidylate synthase [Pedobacter heparinus DSM 2366]
 gi|255344310|gb|ACU03636.1| thymidylate synthase [Pedobacter heparinus DSM 2366]
          Length = 264

 Score =  385 bits (988), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+ + DRTG GT S FGYQMRF+L +GFP++TTKK+H KS++HEL+
Sbjct: 1   MKQYLDLMQHVLDHGTQKHDRTGTGTISVFGYQMRFNLQEGFPMVTTKKLHLKSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G+LGP+YG QWRSWP   G  IDQI+ IV +++
Sbjct: 61  WFLSGDTNIKYLKDNGVKIWDEWADENGDLGPVYGSQWRSWPKPGGGHIDQIAQIVNTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVAEVENMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G  YG+FIHTLGD HLYNNH EQ  LQLSR PR LP M INP I D+ 
Sbjct: 181 YALLTMMVAQVCGLAYGDFIHTLGDAHLYNNHIEQTRLQLSREPRKLPVMEINPEIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF YEDFTL+ Y+PH  I   V+V
Sbjct: 241 SFSYEDFTLKDYDPHPHIKGAVAV 264


>gi|91977820|ref|YP_570479.1| thymidylate synthase [Rhodopseudomonas palustris BisB5]
 gi|123735257|sp|Q134B1|TYSY_RHOPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91684276|gb|ABE40578.1| thymidylate synthase [Rhodopseudomonas palustris BisB5]
          Length = 264

 Score =  384 bits (987), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  ++  G+++ DRTG GT S FG+QMRF+L+ GFP+LTTK++  K++VHELL
Sbjct: 1   MIQYHDLLERILSDGTEKHDRTGTGTLSVFGHQMRFNLAAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI++IV+ ++
Sbjct: 61  WFLQGDTNIKYLRDNGVTIWDEWADANGDLGPVYGAQWRSWPAADGRSIDQIANIVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A +D+MALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPADVDRMALPPCHCLFQFYVAGGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD HLY+NH EQA LQL+R+PR LP+M+I+P + D+ 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHLYSNHLEQARLQLTRAPRALPEMVIDPAVKDVF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDFTL+ Y+PH  I A+V+V
Sbjct: 241 GFRYEDFTLQGYDPHPHIKAEVAV 264


>gi|225024585|ref|ZP_03713777.1| hypothetical protein EIKCOROL_01462 [Eikenella corrodens ATCC
           23834]
 gi|224942647|gb|EEG23856.1| hypothetical protein EIKCOROL_01462 [Eikenella corrodens ATCC
           23834]
          Length = 257

 Score =  384 bits (986), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 169/257 (65%), Positives = 214/257 (83%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           ++H++  G+D+ DRTG GTRS FG+QMRFDL++GFPLLTTKK+H +S++HELLWFL+GD+
Sbjct: 1   MQHILSHGTDKSDRTGTGTRSVFGHQMRFDLAQGFPLLTTKKLHLRSIIHELLWFLKGDT 60

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++ +P SRR
Sbjct: 61  NIRYLKENNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIKRNPDSRR 120

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            IVSAWN AL+D+MALPPCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIASY+LLTMM
Sbjct: 121 LIVSAWNPALVDEMALPPCHALFQFYVAEGRLSCQLYQRSADVFLGVPFNIASYALLTMM 180

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A V G   GEFIHT GD HLY+NHFEQA LQL+R PR LPQM +NP + +L  FR+EDF
Sbjct: 181 MAQVCGLAPGEFIHTFGDAHLYSNHFEQARLQLTREPRALPQMQLNPEVQNLFDFRFEDF 240

Query: 248 TLRSYEPHAAILAKVSV 264
            L++Y+PH  I A+V+V
Sbjct: 241 ELQNYDPHPHIKAQVAV 257


>gi|86749158|ref|YP_485654.1| thymidylate synthase [Rhodopseudomonas palustris HaA2]
 gi|123408309|sp|Q2IYG7|TYSY_RHOP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|86572186|gb|ABD06743.1| thymidylate synthase [Rhodopseudomonas palustris HaA2]
          Length = 264

 Score =  384 bits (986), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G+++ DRTG GT S FG+Q+RFDL+ GFP+LTTK++  K+++HELL
Sbjct: 1   MIPYHDLLERILSDGAEKHDRTGTGTLSVFGHQLRFDLAAGFPMLTTKRLPLKAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+ +V  +R
Sbjct: 61  WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGRSIDQIAHVVDMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A ++KMALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGDFIHTLGDAHLYSNHLEQARLQLTRAPRALPAMAINPAVTDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDFTL  Y+PH  I A+V+V
Sbjct: 241 GFRYEDFTLHGYDPHPHIKAEVAV 264


>gi|319651224|ref|ZP_08005354.1| thymidylate synthase [Bacillus sp. 2_A_57_CT2]
 gi|317397004|gb|EFV77712.1| thymidylate synthase [Bacillus sp. 2_A_57_CT2]
          Length = 264

 Score =  384 bits (986), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL +HV++ G+ + DRTG GT STFGYQMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLCKHVLENGTKKEDRTGTGTISTFGYQMRFNLQEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW+EWAD++G LGP+YG QWRSW   DGN +DQISS++  ++
Sbjct: 61  WFLNGDTNVKYLQENGVRIWNEWADEEGNLGPVYGHQWRSWTGADGNTVDQISSLIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN   I+KMALPPCHC+FQFY  +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVNAWNAGEIEKMALPPCHCMFQFYAADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEF+HT GDVH+Y NH +Q +LQLSR PR LP+MIINP++ D+ 
Sbjct: 181 YALLTMMVAQVCDLEPGEFVHTFGDVHIYQNHIDQVNLQLSRDPRPLPKMIINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+++DF L  Y PH  I   VSV
Sbjct: 241 SFKFDDFQLEDYNPHPHIKGVVSV 264


>gi|90424757|ref|YP_533127.1| thymidylate synthase [Rhodopseudomonas palustris BisB18]
 gi|123394889|sp|Q211X8|TYSY_RHOPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|90106771|gb|ABD88808.1| thymidylate synthase [Rhodopseudomonas palustris BisB18]
          Length = 264

 Score =  384 bits (986), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 172/264 (65%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+QY DLL+ ++  G+++ DRTG GT S FG+QMRF L  GFP+LTTK++  K++VHELL
Sbjct: 1   MNQYHDLLQRILGEGAEKHDRTGTGTLSVFGHQMRFALDAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+ +V+ ++
Sbjct: 61  WFLKGDTNIKYLKDHGVSIWDEWADENGDLGPVYGSQWRSWPAADGRSIDQIADVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A ID+MALPPCHCLFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPAEIDQMALPPCHCLFQFYVARGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGEFIHTLGDAHLYSNHLEQARLQLTRTPRDLPVMTINPQVTDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDFTL +Y+PH  I A+V+V
Sbjct: 241 GFRFEDFTLHNYDPHPHIKAEVAV 264


>gi|307945915|ref|ZP_07661251.1| thymidylate synthase [Roseibium sp. TrichSKD4]
 gi|307771788|gb|EFO31013.1| thymidylate synthase [Roseibium sp. TrichSKD4]
          Length = 264

 Score =  384 bits (985), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G DR DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYLDLMQKVLDEGVDRGDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IWD+WAD++GELGP+YG QWRSWP  DG  IDQI +++  ++
Sbjct: 61  WFLSGDTNVRYLQENGVKIWDDWADENGELGPVYGYQWRSWPAPDGRSIDQIENLLTMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ANPESRRLIVSAWNPALVDEMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+H+ GD H+Y+NHF+Q   QL R+PR LP M +NPN+ DL 
Sbjct: 181 YALLTMMIAQVTGLKSGDFVHSFGDAHIYHNHFDQVREQLIRTPRALPTMTLNPNVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+YEDF L  Y PH  I A ++V
Sbjct: 241 AFKYEDFELTDYNPHPHIKAPIAV 264


>gi|149279349|ref|ZP_01885480.1| thymidylate synthetase [Pedobacter sp. BAL39]
 gi|149229875|gb|EDM35263.1| thymidylate synthetase [Pedobacter sp. BAL39]
          Length = 264

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+ + DRTG GT S FGYQMRF+L +GFP++TTKK+H KS++HEL+
Sbjct: 1   MKQYLDLMQHVLDHGTQKHDRTGTGTISVFGYQMRFNLQEGFPMVTTKKLHLKSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G LGP+YG QWRSWP  DG  IDQIS IV +++
Sbjct: 61  WFLSGDTNIKYLKDNGVKIWDEWADENGNLGPVYGSQWRSWPTPDGRHIDQISQIVNTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I++MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVADIEEMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G +YG+FIHT GD HLYNNH EQA LQLSR  R LP M INP + +LL
Sbjct: 181 YALLTMMVAQVCGLEYGDFIHTFGDAHLYNNHIEQAKLQLSRDIRPLPVMEINPEVKNLL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL+ Y+PH  I   V+V
Sbjct: 241 DFKFEDFTLKGYDPHPHIKGAVAV 264


>gi|110634102|ref|YP_674310.1| thymidylate synthase [Mesorhizobium sp. BNC1]
 gi|122965941|sp|Q11HI0|TYSY_MESSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|110285086|gb|ABG63145.1| thymidylate synthase [Chelativorans sp. BNC1]
          Length = 264

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 172/264 (65%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ G DR DRTG GTR  FGYQMRFDLS GFP+LTTKK+H +S+++ELL
Sbjct: 1   MRQYLDLLAHVLENGIDREDRTGTGTRGVFGYQMRFDLSDGFPVLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  LR
Sbjct: 61  WFLKGDTNIRYLQENGVTIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIANLLNGLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +PYSRRHIV+AWN A ID MALPPCHCLFQF+V  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ENPYSRRHIVTAWNPAEIDGMALPPCHCLFQFHVAEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY NHF+QA  QL+R+P+ LP M INP + DL 
Sbjct: 181 YALLTMMIAQVTGLKPGDFVHTLGDAHLYKNHFDQAREQLTRTPKPLPTMWINPEVDDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F YEDF L  Y     I A ++V
Sbjct: 241 AFGYEDFRLEGYVADPTIRAPIAV 264


>gi|240850869|ref|YP_002972269.1| thymidylate synthase ThyA [Bartonella grahamii as4aup]
 gi|240267992|gb|ACS51580.1| thymidylate synthase ThyA [Bartonella grahamii as4aup]
          Length = 264

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 179/264 (67%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRFDL  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKIYLDLLSHVLNNGIDRTDRTGVGTRSIFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+++L  HGVSIWDEWAD+ G LGPIYG QWRSWP  DG  IDQIS ++  ++
Sbjct: 61  WFLRGDTNIAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPAPDGRHIDQISHLLTMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN ALI++MALPPCHC FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ETPDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA  QLSR P  LP M+IN  + DL 
Sbjct: 181 YALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRIPNALPLMLINSAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +YE    I A V+V
Sbjct: 241 SFKFEDFELLNYEAQPHIKAPVAV 264


>gi|319407478|emb|CBI81128.1| Thymidylate synthase [Bartonella sp. 1-1C]
          Length = 264

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRF+L  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKAYLDLLFHVLNDGIDRFDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADK G+LGPIYG QWRSWP  DG  IDQI +++  ++
Sbjct: 61  WFLKGDTNITWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTPDGRHIDQIKNLLAMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +PYSRR IVSAWN A I++MALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPYSRRLIVSAWNPAAIEEMALPPCHCLFQFYVAAGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A +   Q G+FIHTLGD HLY NHFEQA+ QLSR+P+ LP M+INP + +L 
Sbjct: 181 YALLTMMIAQINHLQVGDFIHTLGDAHLYLNHFEQAEQQLSRTPKALPTMLINPEVKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF ++DF L +YE    I A V+V
Sbjct: 241 SFTFKDFELLNYEAFPHIKAPVAV 264


>gi|253996898|ref|YP_003048962.1| thymidylate synthase [Methylotenera mobilis JLW8]
 gi|253983577|gb|ACT48435.1| thymidylate synthase [Methylotenera mobilis JLW8]
          Length = 264

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+DL++HV + G+ + DRTG GT S FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYIDLVQHVFEHGNKKEDRTGTGTVSVFGYQMRFNLAEGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV IWDEWAD++G LGP+YG QWR+WP  DG+ IDQI+ +V S++
Sbjct: 61  WFLQGSTNIAYLKENGVRIWDEWADENGNLGPVYGYQWRNWPKPDGSHIDQIAQVVNSIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+M LPPCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y+NHFEQ   QL R PR LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYSNHFEQMHEQLQRDPRPLPTMRINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDFTL  Y+PH  I  +V+V
Sbjct: 241 SFKFEDFTLEGYDPHPPIKGQVAV 264


>gi|261416896|ref|YP_003250579.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261373352|gb|ACX76097.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327357|gb|ADL26558.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 270

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/270 (64%), Positives = 217/270 (80%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +I  G DR DRTG GTRS FG Q RFDLSKGFP LTTKK+H +S++HELL
Sbjct: 1   MQQYLDLLKDIIDNGVDRSDRTGTGTRSVFGRQTRFDLSKGFPCLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH + V+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++ SL+
Sbjct: 61  WFLKGDTNIKYLHDNKVTIWDEWADENGDLGPVYGHQWRSWPTPDGGHIDQIANLINSLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGI 174
            +P SRRH+V AWNVA +DKMALPPCHCLFQFYV         KLSCQLYQRS D+FLG+
Sbjct: 121 NNPDSRRHLVCAWNVAEVDKMALPPCHCLFQFYVGGVGASGKRKLSCQLYQRSADMFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASYSLLTMMLA V G++ GEF+HT GD+HLY+NHF+QA  QLSR+PR LP M +NP
Sbjct: 181 PFNIASYSLLTMMLAQVCGYEAGEFVHTFGDLHLYSNHFDQAREQLSRTPRALPTMKMNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           ++ DL +F++EDF L +Y+P   I A ++V
Sbjct: 241 DVKDLFNFKFEDFELVNYDPWPTIKAPIAV 270


>gi|254503707|ref|ZP_05115858.1| thymidylate synthase [Labrenzia alexandrii DFL-11]
 gi|222439778|gb|EEE46457.1| thymidylate synthase [Labrenzia alexandrii DFL-11]
          Length = 268

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 173/268 (64%), Positives = 216/268 (80%), Gaps = 4/268 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  +++ G DR DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYHDLLSKILEDGIDRGDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIV 116
           WF+ GD+N++YL  HGV IWD+WAD++G+LGP+YG QWRSWP    D  G  IDQIS+++
Sbjct: 61  WFVAGDTNIAYLKEHGVKIWDDWADENGDLGPVYGYQWRSWPAPYRDGSGQSIDQISNVL 120

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           + +R  P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PF
Sbjct: 121 EMIRKSPESRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADVFLGVPF 180

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           NIASY+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA  QL+R+PR LP+M INP +
Sbjct: 181 NIASYALLTMMIAQVTGLKPGDFVHTLGDAHLYSNHFDQAREQLTRAPRALPEMKINPAV 240

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            DL +F YEDF L  Y+PH  I A ++V
Sbjct: 241 TDLFAFTYEDFELTGYDPHPHIAAPIAV 268


>gi|319404485|emb|CBI78092.1| Thymidylate synthase [Bartonella rochalimae ATCC BAA-1498]
          Length = 264

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 174/264 (65%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRF+L  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKAYLDLLFHVLNNGIDRFDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADK G+LGPIYG QWRSWP  DG  IDQI +++  ++
Sbjct: 61  WFLKGDTNITWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTSDGRHIDQIKNLLAMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DPYSRR +VSAWN A I++MALPPCHCLFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KDPYSRRLVVSAWNPAAIEEMALPPCHCLFQFYVAAGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A +   Q G+FIHT+GD HLY NHFEQA  QLSR+P+ LP M+INP + +L 
Sbjct: 181 YALLTMMIAQINHLQVGDFIHTIGDAHLYLNHFEQAKQQLSRTPKALPTMLINPEVKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+++DF L +YE    I A V+V
Sbjct: 241 SFKFKDFELLNYEAFPHIKAPVAV 264


>gi|114706847|ref|ZP_01439747.1| thymidylate synthase [Fulvimarina pelagi HTCC2506]
 gi|114537795|gb|EAU40919.1| thymidylate synthase [Fulvimarina pelagi HTCC2506]
          Length = 264

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 172/264 (65%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+DR DRTG GTRS FG+QMRFDL +GFPLLTTK++H +S+VHELL
Sbjct: 1   MRQYLDLLARVLGEGTDRPDRTGTGTRSVFGHQMRFDLGEGFPLLTTKRLHIRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV IWDEWAD++G+LGP+YG QWRSWPDYDG  IDQIS ++ +LR
Sbjct: 61  WFLKGDTNIAYLKANGVRIWDEWADENGDLGPVYGAQWRSWPDYDGGTIDQISGVLDTLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P+SRR IVSAWN AL+D MALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPHSRRLIVSAWNPALVDTMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY +H EQA LQL R+P  LP + +NP++ DL 
Sbjct: 181 YALLTHMIAQASGLDVGDFVHTLGDAHLYADHLEQARLQLDRTPGPLPVLKLNPDVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F + D  + +YE    I A +SV
Sbjct: 241 AFTFADVAIENYEAQPHIAAPISV 264


>gi|27381623|ref|NP_773152.1| thymidylate synthase [Bradyrhizobium japonicum USDA 110]
 gi|62901370|sp|Q89G35|TYSY_BRAJA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|27354791|dbj|BAC51777.1| thymidylate synthase [Bradyrhizobium japonicum USDA 110]
          Length = 264

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL  ++  G+++ DRTG GT S FG+QMRF+LS GFP+LTTK++  K++VHELL
Sbjct: 1   MHQYQDLLERILSDGAEKTDRTGTGTLSVFGHQMRFNLSAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+++V  ++
Sbjct: 61  WFLKGDTNIKYLRDNGVTIWDEWADANGDLGPVYGHQWRSWPAPDGRSIDQIANVVDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +DKMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+H+ GD HLY+NH EQA LQL+R+PR LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSFGDTHLYSNHLEQAKLQLTRAPRALPVMRINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFR+EDF L  Y+PH  I A+V+V
Sbjct: 241 SFRFEDFELVGYDPHPHIKAEVAV 264


>gi|226357353|ref|YP_002787093.1| thymidylate synthase [Deinococcus deserti VCD115]
 gi|259550769|sp|C1D070|TYSY_DEIDV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226319343|gb|ACO47339.1| putative thymidylate synthase [Deinococcus deserti VCD115]
          Length = 264

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV++ G+++ DRTG GT S FG+QMRFDL +GFPL+TTK+ H KS++HELL
Sbjct: 1   MQQYLDFMRHVLEHGTEKTDRTGTGTLSVFGHQMRFDLQEGFPLVTTKRTHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G SNV+YL  HGV+IWDEWAD DGELGP+YGVQWRSWP  DG  IDQI+ +V+ +R
Sbjct: 61  WFLQGSSNVAYLREHGVTIWDEWADPDGELGPVYGVQWRSWPTPDGRHIDQIAQVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  I++MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RTPDSRRLIVSAWNVGEIEQMALPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEFI T GD HLY NH EQA  QL+R PRTLP M +NP++ +L 
Sbjct: 181 YALLTLMVAQVTGLKPGEFIWTGGDCHLYTNHLEQARKQLTREPRTLPVMRLNPDVRELD 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDFTL  Y+PH  I A V+V
Sbjct: 241 GFRFEDFTLEGYDPHPGIKAPVAV 264


>gi|297564578|ref|YP_003683550.1| thymidylate synthase [Meiothermus silvanus DSM 9946]
 gi|296849027|gb|ADH62042.1| thymidylate synthase [Meiothermus silvanus DSM 9946]
          Length = 264

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y +L+R+V++ G  + DRTGVGTRS FGYQMRFDL +GFPL+TTKKVHWKSVV+ELL
Sbjct: 1   MQAYHELMRYVLEHGVPKSDRTGVGTRSIFGYQMRFDLQEGFPLVTTKKVHWKSVVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  HGVSIWDEWAD+ GELGPIYG QWRSW    G  +DQI+ ++Q +R
Sbjct: 61  WFLRGDTNIRYLKEHGVSIWDEWADESGELGPIYGKQWRSWEGPGGKTVDQIAWVLQEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + KMAL PCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRMVVSAWNVADLPKMALAPCHTLFQFYVSGGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEFIHTLGD HLYNNH EQA +QL+R PR LP + +NP + DL 
Sbjct: 181 YALLTLMIAHVSGLEPGEFIHTLGDAHLYNNHLEQARIQLAREPRPLPTVRLNPGLRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYED  L  Y PH  I A V+V
Sbjct: 241 AFRYEDIVLEGYHPHPPIPAPVAV 264


>gi|56964719|ref|YP_176450.1| thymidylate synthase [Bacillus clausii KSM-K16]
 gi|62901226|sp|Q5WDS1|TYSY_BACSK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|56910962|dbj|BAD65489.1| thymidylate synthase [Bacillus clausii KSM-K16]
          Length = 264

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L  HV++ GS + DRTG GT S FGYQMRFDL KGFP++TTKK+H +S++HELL
Sbjct: 1   MEQYLQLCEHVLQNGSPKSDRTGTGTISVFGYQMRFDLEKGFPIVTTKKLHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWRSW   +G  +DQI+ +V+ ++
Sbjct: 61  WFLKGDTNIRYLQENGVRIWNEWADENGDLGPVYGKQWRSWEGANGKTVDQITEVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNVA I++MAL PCHCLFQFYV++GKLSCQLYQRS D+FLG+PFNI+S
Sbjct: 121 TNPNSRRLIVNAWNVAEIEEMALAPCHCLFQFYVNDGKLSCQLYQRSADIFLGVPFNISS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLYNNH EQ  LQL+R P+ LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLKPGEFIHTFGDAHLYNNHIEQTKLQLTRKPKQLPTMHINPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F Y+DF L+ Y+P+  I A+VSV
Sbjct: 241 AFTYDDFELKHYDPYPHIKAEVSV 264


>gi|149196226|ref|ZP_01873281.1| thymidylate synthase [Lentisphaera araneosa HTCC2155]
 gi|149140487|gb|EDM28885.1| thymidylate synthase [Lentisphaera araneosa HTCC2155]
          Length = 264

 Score =  382 bits (980), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HVIK G D+ DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLLDHVIKNGVDKSDRTGTGTRSVFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G LGP+YG QWRSW   DG  IDQI+ ++++++
Sbjct: 61  WFLTGDTNIKYLKDNGVSIWDEWADEEGNLGPVYGYQWRSWKTPDGRTIDQIAQLIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV+ +D MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TKPDSRRLIVSAWNVSDVDNMALPPCHSLFQFYVADNKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   +YG+F+HT GD H+Y+NHFEQA LQLSR  R LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVCDLEYGDFVHTFGDAHIYSNHFEQAKLQLSRDTRPLPTMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF +EDFTL  Y+PH  I A V++
Sbjct: 241 SFTFEDFTLEGYDPHPHIKAPVAI 264


>gi|325283967|ref|YP_004256508.1| Thymidylate synthase [Deinococcus proteolyticus MRP]
 gi|324315776|gb|ADY26891.1| Thymidylate synthase [Deinococcus proteolyticus MRP]
          Length = 264

 Score =  382 bits (980), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L H+++ G+D+ DRTG GTRS FGYQMRFDL +GFPL+TTK+VH KSV++ELL
Sbjct: 1   MRQYLDYLSHIMEHGTDKADRTGTGTRSVFGYQMRFDLQQGFPLVTTKRVHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG+SNV +L  HGV+IWDEWA + G+LGP+YGVQWRSWPDY G  IDQI+ +++ ++
Sbjct: 61  WFLRGESNVGWLQDHGVTIWDEWAREGGKLGPVYGVQWRSWPDYGGGQIDQIAQVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA + +MALPPCH LFQFYV +G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 QNPDSRRLIVSAWNVAQVGEMALPPCHLLFQFYVADGRLSCQLYQRSADSFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEF+ T GD H+Y+NHFEQ + QL R PR LP+M +NP + D+ 
Sbjct: 181 YALLTMMVAQVCDLEPGEFVWTGGDCHVYHNHFEQVERQLKREPRPLPKMHLNPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDFTL  Y+PH  I A+V+V
Sbjct: 241 AFRYEDFTLEGYDPHPGIKAEVAV 264


>gi|229496508|ref|ZP_04390222.1| thymidylate synthase [Porphyromonas endodontalis ATCC 35406]
 gi|229316405|gb|EEN82324.1| thymidylate synthase [Porphyromonas endodontalis ATCC 35406]
          Length = 265

 Score =  382 bits (980), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/265 (66%), Positives = 210/265 (79%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+ ++  G+ R DRTG GT+S FG+QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MRQYLELLQKIMDEGTLRSDRTGTGTKSIFGHQMRFDLEDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD-GNVIDQISSIVQSL 119
           WFLRGDSNV+YL  HGVSIWDEWAD +G LGPIYGVQWRSWP Y+ G   DQI+ +V+ +
Sbjct: 61  WFLRGDSNVAYLQEHGVSIWDEWADPEGNLGPIYGVQWRSWPSYNQGEAYDQIAQVVEDI 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWNVA ID+MALPPCHCL QFYV NG+LS QLYQRSGDVFLG+PFNIA
Sbjct: 121 RTSPDSRRLMVSAWNVAQIDQMALPPCHCLMQFYVANGRLSLQLYQRSGDVFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LL MM+A V G + G F+HTLGD HLY NH EQ  LQL+RSPRTLP M +NP + +L
Sbjct: 181 SYALLLMMVAQVTGLKPGTFVHTLGDAHLYCNHLEQTALQLTRSPRTLPTMQLNPEVRNL 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F++EDF L  Y PH  I A ++V
Sbjct: 241 EDFKFEDFKLLDYTPHPHIAAPIAV 265


>gi|319405984|emb|CBI79616.1| Thymidylate synthase [Bartonella sp. AR 15-3]
          Length = 264

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRF+L  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKAYLDLLFHVLNNGIDRLDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADK G+LGPIYG QWRSWP  DG  IDQI +++  ++
Sbjct: 61  WFLKGDTNIAWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTPDGRNIDQIKNLLAMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A I++MALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QNPDSRRLIVSAWNPAAIEEMALPPCHCLFQFYVAAGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A +   Q G+FIHTLGD HLY NHFEQA+ QLSR+P+ LP M+INP + +L 
Sbjct: 181 YALLTMMIAQITHLQVGDFIHTLGDAHLYLNHFEQAEQQLSRTPKALPSMLINPEVKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF ++DF L +YE    I A V+V
Sbjct: 241 SFTFKDFELLNYEAFPHIKAPVAV 264


>gi|328542989|ref|YP_004303098.1| dihydrofolate reductase-thymidylate synthase-like protein
           [polymorphum gilvum SL003B-26A1]
 gi|326412735|gb|ADZ69798.1| putative dihydrofolate reductase-thymidylate synthase,
           putative-like protein [Polymorphum gilvum SL003B-26A1]
          Length = 322

 Score =  381 bits (978), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 171/268 (63%), Positives = 210/268 (78%), Gaps = 4/268 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           + QYLDL++ ++  G+DR DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H KS++HELL
Sbjct: 55  VQQYLDLMQKILDEGTDRGDRTGTGTRSIFGHQMRFDLAAGFPLVTTKKLHLKSIIHELL 114

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIV 116
           WFL GD+N+ YL+RHGV IWD+WAD+ GELGP+YG QWRSWP    +  G  IDQI++++
Sbjct: 115 WFLAGDTNIGYLNRHGVKIWDDWADEHGELGPVYGAQWRSWPAPTPEDGGRTIDQIATVL 174

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           + +R  P SRR IVSAWN AL+D MALPPCH LFQFYV  G+LSCQLYQRS DVFLG+PF
Sbjct: 175 RMIRETPESRRLIVSAWNPALVDAMALPPCHALFQFYVAEGRLSCQLYQRSADVFLGVPF 234

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           NIASY+LLTMM+A V G + G F+HT GD HLY NHF QA  QL+R PR LP M +NP +
Sbjct: 235 NIASYALLTMMVAQVTGLKPGHFVHTFGDAHLYANHFAQAREQLTREPRPLPTMTLNPAV 294

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            DL +F YEDFTL  Y+PH  I A ++V
Sbjct: 295 TDLFAFTYEDFTLSGYDPHPHIKAPIAV 322


>gi|74318058|ref|YP_315798.1| thymidylate synthase [Thiobacillus denitrificans ATCC 25259]
 gi|123759029|sp|Q3SH96|TYSY_THIDA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|74057553|gb|AAZ97993.1| thymidylate synthase [Thiobacillus denitrificans ATCC 25259]
          Length = 264

 Score =  381 bits (978), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV++ G+ + DRTG GT S FG+Q R+DL+ GFPL+TTKK H +S+VHELL
Sbjct: 1   MKPYLDLMRHVLEHGTRKDDRTGTGTLSVFGWQTRYDLAAGFPLVTTKKCHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG VIDQI+  V++LR
Sbjct: 61  WFLQGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRSWPKADGGVIDQIAEAVKTLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+MAL PCH  FQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRIIVSAWNVADLDRMALAPCHAFFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+HTLGD HLY NH EQA  QLSR PR LP M +NP++ D+ 
Sbjct: 181 YALLTLMMAQVTGLKPGDFVHTLGDAHLYVNHLEQAREQLSREPRPLPTMTLNPDVTDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDFTL  Y+PH AI A V+V
Sbjct: 241 GFRFEDFTLGGYDPHPAIKAPVAV 264


>gi|49475832|ref|YP_033873.1| thymidylate synthase [Bartonella henselae str. Houston-1]
 gi|62901309|sp|Q6G2S8|TYSY_BARHE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|49238640|emb|CAF27884.1| Thymidylate synthase [Bartonella henselae str. Houston-1]
          Length = 264

 Score =  380 bits (977), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRFDL  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKTYLDLLSHVLNKGIDRTDRTGVGTRSVFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+++L  HGVSIWDEWAD+ G LGPIYG QWRSWP  DG  IDQIS+++  ++
Sbjct: 61  WFLRGDTNIAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPAPDGRHIDQISNLLMMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A I +MALPPCHC FQFYV +GKLSCQLYQRS D+FLGIPFNIAS
Sbjct: 121 KTPDSRRLIVSAWNPASIKEMALPPCHCFFQFYVADGKLSCQLYQRSADIFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA  QLSR P  LP M INP + DL 
Sbjct: 181 YALLTMMIAQVSGLKVGDFIHTLGDAHLYSNHFEQAQHQLSRIPNALPFMRINPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +Y+    I A ++V
Sbjct: 241 SFKFEDFELLNYDAQPHIKAPIAV 264


>gi|253998589|ref|YP_003050652.1| thymidylate synthase [Methylovorus sp. SIP3-4]
 gi|253985268|gb|ACT50125.1| thymidylate synthase [Methylovorus sp. SIP3-4]
          Length = 264

 Score =  380 bits (977), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 168/264 (63%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G  + DRTG GT S FGYQMRFDL+ GFPLLTTKKVH KS++HELL
Sbjct: 1   MQTYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAAGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV+IWDEWAD +G LGP+YG QWR+WP  DG+ IDQI+ +V++++
Sbjct: 61  WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGSHIDQITQVVEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ   QLSR+PR+LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYLNHMEQVKEQLSRTPRSLPTMQINPDVRDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF+L++Y+P+  I A V+V
Sbjct: 241 AFRYEDFSLQNYDPYPPIKAPVAV 264


>gi|118590864|ref|ZP_01548264.1| thymidylate synthase [Stappia aggregata IAM 12614]
 gi|118436386|gb|EAV43027.1| thymidylate synthase [Stappia aggregata IAM 12614]
          Length = 264

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G DR DRTG GTRS FG+QMRFDLS+GFP  TTKK+H KS++HELL
Sbjct: 1   MQQYLDLLSKILDEGVDRGDRTGTGTRSIFGHQMRFDLSQGFPCTTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWD+WAD++G+LGP+YG QWRSWP  DG  IDQI+++++ +R
Sbjct: 61  WFLAGDTNIRYLKENGVKIWDDWADENGDLGPVYGYQWRSWPAPDGRSIDQIANLLKMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPESRRLIVSAWNPALVDEMALPPCHSLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HT GD HLY NHF+QA  QL+RSPR LP+M INP + DL 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTFGDAHLYANHFDQAREQLTRSPRPLPEMKINPEVTDLS 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+P   I A ++V
Sbjct: 241 AFKFEDFELTGYDPLPHIAAPIAV 264


>gi|149179666|ref|ZP_01858171.1| thymidylate synthase [Bacillus sp. SG-1]
 gi|148851858|gb|EDL66003.1| thymidylate synthase [Bacillus sp. SG-1]
          Length = 264

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L +HV++ G+++ DRTG GT STFGYQMRFDLS+GFP+LTTKK+H KS++HELL
Sbjct: 1   MKQYLELCKHVLENGTEKGDRTGTGTISTFGYQMRFDLSEGFPMLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW++WAD+ G+LGP+YG QWRSW    G  IDQIS ++++++
Sbjct: 61  WFLNGDTNVKYLQDNGVRIWNDWADETGDLGPVYGKQWRSWEGAGGETIDQISELIENIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRLIVNAWNVGEIDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A+V   + GEF+HT GDVH+Y NH EQ  LQL+R PR+LP + IN ++ D+ 
Sbjct: 181 YALLTMMIANVCDLEPGEFVHTFGDVHIYQNHMEQVKLQLTREPRSLPSIRINKDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           S+ +EDFTL  Y+PH  I   VSV
Sbjct: 241 SYSFEDFTLEDYDPHPHIKGVVSV 264


>gi|313200661|ref|YP_004039319.1| thymidylate synthase [Methylovorus sp. MP688]
 gi|312439977|gb|ADQ84083.1| thymidylate synthase [Methylovorus sp. MP688]
          Length = 264

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 168/264 (63%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G  + DRTG GT S FGYQMRFDL+ GFPLLTTKKVH KS++HELL
Sbjct: 1   MQTYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAAGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV+IWDEWAD +G LGP+YG QWR+WP  DG+ IDQI+ +V +++
Sbjct: 61  WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGSHIDQITQVVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ   QLSR+PR+LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYLNHMEQVKEQLSRTPRSLPTMQINPDVRDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF+L++Y+P+  I A V+V
Sbjct: 241 AFRYEDFSLQNYDPYPPIKAPVAV 264


>gi|254470038|ref|ZP_05083442.1| thymidylate synthase [Pseudovibrio sp. JE062]
 gi|211960349|gb|EEA95545.1| thymidylate synthase [Pseudovibrio sp. JE062]
          Length = 264

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+R ++  G  + DRTG GT+S FG+QMRF+LS+GFP++TTKK+H +S++HELL
Sbjct: 1   MQQYLELMRRIMDEGVVKEDRTGTGTKSVFGHQMRFNLSEGFPVVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + V IWDEWAD++G+LGP+YG QWRSWP  DG+ IDQI+++VQ ++
Sbjct: 61  WFLAGDTNIKYLKDNKVRIWDEWADENGDLGPVYGYQWRSWPKPDGSSIDQIANVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D MALPPCH LFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNPALVDDMALPPCHSLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+F+HTLGD HLY NH EQA+LQLSR PR LP M INP + D+ 
Sbjct: 181 YALLTMMIAQVCDLEPGDFVHTLGDAHLYLNHMEQAELQLSREPRALPVMRINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF L  Y+PH  I   V+V
Sbjct: 241 AFRYEDFALEGYDPHPHIKGVVAV 264


>gi|15595539|ref|NP_249033.1| thymidylate synthase [Pseudomonas aeruginosa PAO1]
 gi|107099326|ref|ZP_01363244.1| hypothetical protein PaerPA_01000338 [Pseudomonas aeruginosa PACS2]
 gi|116054070|ref|YP_788513.1| thymidylate synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889083|ref|YP_002437947.1| thymidylate synthase [Pseudomonas aeruginosa LESB58]
 gi|254237422|ref|ZP_04930745.1| thymidylate synthase [Pseudomonas aeruginosa C3719]
 gi|254243441|ref|ZP_04936763.1| thymidylate synthase [Pseudomonas aeruginosa 2192]
 gi|296386838|ref|ZP_06876337.1| thymidylate synthase [Pseudomonas aeruginosa PAb1]
 gi|22096233|sp|Q9I6F1|TYSY_PSEAE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|122261789|sp|Q02U73|TYSY_PSEAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713171|sp|B7V2Q5|TYSY_PSEA8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|9946191|gb|AAG03731.1|AE004472_3 thymidylate synthase [Pseudomonas aeruginosa PAO1]
 gi|115589291|gb|ABJ15306.1| thymidylate synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169353|gb|EAZ54864.1| thymidylate synthase [Pseudomonas aeruginosa C3719]
 gi|126196819|gb|EAZ60882.1| thymidylate synthase [Pseudomonas aeruginosa 2192]
 gi|218769306|emb|CAW25066.1| thymidylate synthase [Pseudomonas aeruginosa LESB58]
          Length = 264

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL
Sbjct: 1   MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  L+
Sbjct: 61  WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMAMLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L  YE H  I A V+V
Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264


>gi|154252890|ref|YP_001413714.1| thymidylate synthase [Parvibaculum lavamentivorans DS-1]
 gi|171769615|sp|A7HVX4|TYSY_PARL1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|154156840|gb|ABS64057.1| Thymidylate synthase [Parvibaculum lavamentivorans DS-1]
          Length = 264

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/264 (65%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R     G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H KS++HELL
Sbjct: 1   MQQYLDLMRLARDTGVTKTDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ GD+N  YL  +GVSIWD+WAD++GELGP+YG QWRSWP  DG  IDQI ++V+ ++
Sbjct: 61  WFIAGDTNTRYLKANGVSIWDDWADENGELGPVYGHQWRSWPTPDGGKIDQIRNLVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D MALPPCHCLFQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVADVDSMALPPCHCLFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY NH EQAD QL+R P+ LP M INP++  L 
Sbjct: 181 YALLTMMVAQVTGLKPGEFIHTFGDAHLYLNHLEQADKQLAREPKKLPVMHINPDVKSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y+DFTL  YE H  I A V+V
Sbjct: 241 DFTYDDFTLEGYEAHPHISAPVAV 264


>gi|229544326|ref|ZP_04433385.1| thymidylate synthase [Bacillus coagulans 36D1]
 gi|229325465|gb|EEN91141.1| thymidylate synthase [Bacillus coagulans 36D1]
          Length = 265

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL R V++ G  + DRTG GT S FG+QMRF L  GFPLLTTKK+H KS+++ELL
Sbjct: 2   MKQYLDLCREVLENGVKKDDRTGTGTISVFGHQMRFHLQDGFPLLTTKKLHLKSIIYELL 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L+GD+NV YL  +GV IW+EWAD++G+LGP+YG QWRSW   DG  IDQI+ +++ ++
Sbjct: 62  WMLKGDTNVKYLQENGVRIWNEWADENGDLGPVYGQQWRSWQTRDGRTIDQITQVIEQIK 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNV  ID+MALPPCHC FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 122 TNPDSRRLIVNAWNVGEIDRMALPPCHCFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 181

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ  LQL R PR LP+M++NP + D+ 
Sbjct: 182 YALLTMMIAQVTGLEPGDFVHTLGDAHIYLNHIEQVKLQLEREPRKLPKMVLNPEVKDIF 241

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFRYEDFTL+ Y P+  I  +VSV
Sbjct: 242 SFRYEDFTLKDYNPYPHIPGRVSV 265


>gi|313112042|ref|ZP_07797826.1| thymidylate synthase [Pseudomonas aeruginosa 39016]
 gi|310884328|gb|EFQ42922.1| thymidylate synthase [Pseudomonas aeruginosa 39016]
          Length = 264

 Score =  378 bits (970), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL
Sbjct: 1   MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+ ++  L+
Sbjct: 61  WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIAHLMAMLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L  YE H  I A V+V
Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264


>gi|326800370|ref|YP_004318189.1| Thymidylate synthase [Sphingobacterium sp. 21]
 gi|326551134|gb|ADZ79519.1| Thymidylate synthase [Sphingobacterium sp. 21]
          Length = 273

 Score =  377 bits (969), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 170/273 (62%), Positives = 214/273 (78%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G D++DRTG GTRS FGYQMRF+L +GFPL+TTKK+H +S++HEL+
Sbjct: 1   MQQYLDLMRHVYEHGVDKQDRTGTGTRSVFGYQMRFNLQEGFPLVTTKKLHLRSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+SYL  + VSIWDEWAD++G LGP+YG QWRSWP  DG  IDQI+ ++  L+
Sbjct: 61  WFLKGETNISYLKENKVSIWDEWADENGNLGPVYGSQWRSWPTPDGKHIDQIAQVIHQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---------DNGKLSCQLYQRSGDVF 171
            +P SRR IVSAWNVA I+KMALPPCH  FQFYV            +LSCQLYQRS D+F
Sbjct: 121 NNPDSRRIIVSAWNVAEIEKMALPPCHAFFQFYVAPPNKEKGQTKAQLSCQLYQRSADIF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V   +  +FIHTLGD HLY+NH EQA LQL+R+P++LP++ 
Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEAADFIHTLGDAHLYSNHLEQATLQLTRTPKSLPKLK 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           INP I  +  FRYEDFTL  Y+PH  I A+V+V
Sbjct: 241 INPEIKSIFDFRYEDFTLVDYDPHPHIKAEVAV 273


>gi|114331021|ref|YP_747243.1| thymidylate synthase [Nitrosomonas eutropha C91]
 gi|122314079|sp|Q0AHA4|TYSY_NITEC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|114308035|gb|ABI59278.1| thymidylate synthase [Nitrosomonas eutropha C91]
          Length = 264

 Score =  377 bits (968), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MH YLDL+RHV+++G  + DRTG GT S FGYQMRFDL +GFPL+TTK+ H KS++HELL
Sbjct: 1   MHPYLDLMRHVLQYGHKKTDRTGTGTLSIFGYQMRFDLQQGFPLVTTKQCHVKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL ++G+SIW+EWADK GELGP+YG QWRSW       IDQI+ ++Q ++
Sbjct: 61  WFLRGDTNIDYLKKNGISIWNEWADKSGELGPVYGHQWRSWTVSGDKSIDQIAQVIQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A P SRR I+SAWNV  +DKMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ATPDSRRMIISAWNVGDLDKMALAPCHVLFQFYVVDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT+M+A     + GEFIHT GD HLY NH EQA LQL+R P++LP M +NP I ++L
Sbjct: 181 YSLLTLMIAQCCNLKPGEFIHTFGDAHLYLNHLEQARLQLTREPKSLPIMELNPAIRNIL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDFTL +Y+PH  I A V+V
Sbjct: 241 DFRYEDFTLHNYDPHPPIKAPVAV 264


>gi|152988193|ref|YP_001345831.1| thymidylate synthase [Pseudomonas aeruginosa PA7]
 gi|166231724|sp|A6UYE6|TYSY_PSEA7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|150963351|gb|ABR85376.1| thymidylate synthase [Pseudomonas aeruginosa PA7]
          Length = 264

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/264 (66%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFPL+TTKK H KS+VHELL
Sbjct: 1   MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAAGFPLVTTKKCHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  L+
Sbjct: 61  WFLQGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMTMLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVAGLRPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L  Y+ H  I A V+V
Sbjct: 241 DFRFEDFELVGYQAHPHIKAPVAV 264


>gi|85714701|ref|ZP_01045688.1| thymidylate synthase [Nitrobacter sp. Nb-311A]
 gi|85698586|gb|EAQ36456.1| thymidylate synthase [Nitrobacter sp. Nb-311A]
          Length = 264

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+QY DLL  +++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+  +S+VHELL
Sbjct: 1   MNQYHDLLERILREGAEKHDRTGTGTLSVFGHQMRFDLASGFPMLTTKKLPLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  +R
Sbjct: 61  WFLRGETNIKYLKDNGVSIWDEWADENGDLGPVYGSQWRSWPAPDGGSIDQIANVIDMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +DKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G   G+F+H+LGD HLY+NH EQA LQLSR  R LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLSPGDFVHSLGDAHLYSNHLEQARLQLSRPARPLPTMTINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F Y DF L +Y+PH  I A+V+V
Sbjct: 241 AFCYGDFKLENYDPHPHIKAEVAV 264


>gi|209884416|ref|YP_002288273.1| thymidylate synthase [Oligotropha carboxidovorans OM5]
 gi|229558058|sp|B6JB67|TYSY_OLICO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|209872612|gb|ACI92408.1| thymidylate synthase [Oligotropha carboxidovorans OM5]
          Length = 264

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL H++  G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+ +K++VHELL
Sbjct: 1   MHQYQDLLEHILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKKLPFKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GVSIWDEWAD +G+LGP+YG QWRSW   DG  IDQI+++VQ +R
Sbjct: 61  WFLAGDTNVRYLQNNGVSIWDEWADANGDLGPVYGKQWRSWQAPDGRSIDQITNLVQMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A +++MALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVTAWNPADVEQMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V     G F+HT GD HLY+NH +QA LQL+R+PR LP + INP + D+ 
Sbjct: 181 YALLMMMIAQVTDLAPGHFVHTFGDAHLYSNHLDQARLQLTRAPRALPTLRINPAVRDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L +Y+PH  I A+V+V
Sbjct: 241 GFRYEDFKLENYDPHPHIKAEVAV 264


>gi|311030413|ref|ZP_07708503.1| thymidylate synthase [Bacillus sp. m3-13]
          Length = 264

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL +H++  G+++ DRTG GT STFGYQMRFDL +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLCKHILHNGTEKEDRTGTGTISTFGYQMRFDLQEGFPLVTTKKLHVKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWRSWP  DG  IDQI+ +++ ++
Sbjct: 61  WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGYQWRSWPTPDGESIDQIAKLIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D MALPPCH +FQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPDSRRLIVSAWNVANVDSMALPPCHTMFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEFIHTLGD H+Y+NH EQ +LQL R P+ LP+M +N  +  + 
Sbjct: 181 YALLTMMVAQVCELEPGEFIHTLGDAHIYSNHIEQVNLQLGREPKKLPKMKLNKEVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDFTL  Y+ H  I   VSV
Sbjct: 241 DFKYEDFTLVDYDAHPHIKGVVSV 264


>gi|307544291|ref|YP_003896770.1| thymidylate synthase [Halomonas elongata DSM 2581]
 gi|307216315|emb|CBV41585.1| thymidylate synthase [Halomonas elongata DSM 2581]
          Length = 284

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 165/261 (63%), Positives = 215/261 (82%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL+R V++ G +R DRTGVGTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELLWFL
Sbjct: 24  YLDLMRTVLEHGVERDDRTGVGTRSLFGHQMRFDLSRGFPLITTKKLHLRSIIHELLWFL 83

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            GD+N++YL  +GV IWDEWAD++G+LGP+YG QWRSWPD  G  +DQI+ +++ LR +P
Sbjct: 84  AGDTNIAYLKENGVRIWDEWADENGDLGPVYGYQWRSWPDPRGGHVDQIAGLLEQLRRNP 143

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWN AL+D+MALPPCHCLFQFYV  G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 144 QSRRLIVSAWNPALVDEMALPPCHCLFQFYVAEGRLSCQLYQRSADIFLGVPFNIASYAL 203

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A V G + G+F+HT GD HLY NH EQA+LQL+R+PR  P++ ++P++ DL +FR
Sbjct: 204 LTRMIAQVAGLEPGDFVHTFGDAHLYLNHLEQAELQLTRTPRPAPRLTLDPSVDDLFAFR 263

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +E   +  Y+PH  I A+V+V
Sbjct: 264 FEHIAIEDYDPHPHIKAEVAV 284


>gi|291296233|ref|YP_003507631.1| thymidylate synthase [Meiothermus ruber DSM 1279]
 gi|290471192|gb|ADD28611.1| thymidylate synthase [Meiothermus ruber DSM 1279]
          Length = 264

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 172/264 (65%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+RHV++ G D+ DRTGVGTRS FGYQMRFDL +GFPL+TTKKVHWKSVV+ELL
Sbjct: 1   MQQYHDLMRHVLEHGVDKSDRTGVGTRSVFGYQMRFDLRQGFPLVTTKKVHWKSVVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ +L  +GV+IWDEWAD+ GELGP+YG QWRSW   DG  IDQ++ +++ +R
Sbjct: 61  WFLRGETNIGFLRENGVTIWDEWADEAGELGPVYGKQWRSWAGPDGQTIDQLAWVLEEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + +MAL PCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVADLPQMALAPCHILFQFYVAQGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + GE IHTLGD HLY NHFEQA LQLSR PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQVTGLEPGELIHTLGDAHLYRNHFEQARLQLSREPRPLPTLRLNPAVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F Y+D  L +Y PH  I A V+V
Sbjct: 241 AFTYDDIELLNYNPHPRIPAPVAV 264


>gi|255535905|ref|YP_003096276.1| Thymidylate synthase [Flavobacteriaceae bacterium 3519-10]
 gi|255342101|gb|ACU08214.1| Thymidylate synthase [Flavobacteriaceae bacterium 3519-10]
          Length = 302

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+++I  G+++ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL
Sbjct: 39  MQNYLDLLQNIIDNGTNKTDRTGTGTRSIFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 98

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIW+EWAD++G+LGP+YGVQWRSW   DG V+DQIS ++  ++
Sbjct: 99  WFLKGDTNIKYLADNGVSIWNEWADENGDLGPVYGVQWRSWNGADGKVVDQISDVIDQIK 158

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV+ I  MAL PCH LFQFYV +GKLS QLYQRS DVFLG+PFNIAS
Sbjct: 159 KNPDSRRLIVSAWNVSEIPNMALAPCHALFQFYVADGKLSLQLYQRSADVFLGVPFNIAS 218

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V   + G+++HT GDVH+YNNHFEQ + QLSR+P+ LP M +NP I D+ 
Sbjct: 219 YALLLMMVAQVCELEVGDYVHTFGDVHIYNNHFEQVNKQLSRTPKPLPVMKLNPEIKDIF 278

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF +EDFTL +Y+P+  I A V+V
Sbjct: 279 SFNFEDFTLENYDPYPGIKAPVAV 302


>gi|154247442|ref|YP_001418400.1| thymidylate synthase [Xanthobacter autotrophicus Py2]
 gi|154161527|gb|ABS68743.1| Thymidylate synthase [Xanthobacter autotrophicus Py2]
          Length = 264

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLLR ++  G  + DRTG GT S FG+QMRFDL +GFPL+TTKK+H KS+VHELL
Sbjct: 1   MHQYHDLLRRILNEGVRKDDRTGTGTLSVFGHQMRFDLGEGFPLVTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GVSIWDEWAD+ G+LGP+YG QWRSWP  +G VIDQI+ +V  +R
Sbjct: 61  WFLAGDTNVRYLKDNGVSIWDEWADEKGDLGPVYGHQWRSWPTPEGGVIDQIAQVVSDIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A + KMALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPADVSKMALPPCHCLFQFYVLEGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G   G+F+HTLGD HLY NH EQA  QL R+PR LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQVTGLGVGDFVHTLGDAHLYVNHLEQARAQLERTPRALPRLALNPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYED  +  Y+PH AI A V+V
Sbjct: 241 AFRYEDVEIVGYDPHPAIKAPVAV 264


>gi|300776697|ref|ZP_07086555.1| thymidylate synthase B [Chryseobacterium gleum ATCC 35910]
 gi|300502207|gb|EFK33347.1| thymidylate synthase B [Chryseobacterium gleum ATCC 35910]
          Length = 264

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL
Sbjct: 1   MQNYLDLLQHILDNGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSW   DG V+DQI+ ++  ++
Sbjct: 61  WFLKGDTNIKYLKDNGVSIWDEWADENGDLGPVYGAQWRSWSGADGKVVDQITEVIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I  MAL PCH LFQFYV +GKLS QLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNVAEIPNMALAPCHALFQFYVADGKLSLQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V   + G+++H+ GDVH+YNNHFEQ + QL+R PR LP M +NP++ ++ 
Sbjct: 181 YALLLMMVAQVCELEVGDYVHSFGDVHIYNNHFEQVNRQLAREPRALPTMKLNPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDFTL +Y+PH  I A V++
Sbjct: 241 DFDFEDFTLENYDPHPGIKAPVAI 264


>gi|258652990|ref|YP_003202146.1| thymidylate synthase [Nakamurella multipartita DSM 44233]
 gi|258556215|gb|ACV79157.1| thymidylate synthase [Nakamurella multipartita DSM 44233]
          Length = 264

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  ++  G+ + DRTG GTRS FG+QMRFDLS GFPL+TTKKVH +SV+ ELL
Sbjct: 1   MQQYLDLMDRILTTGAVKSDRTGTGTRSIFGHQMRFDLSAGFPLVTTKKVHTRSVIVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L   GV+IWDEWAD DGELGP+YG QWRSWP  DG  IDQI+ +V+SLR
Sbjct: 61  WFLQGSTNVHWLQERGVTIWDEWADADGELGPVYGHQWRSWPAPDGRHIDQIAGLVRSLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRRHIVSAWNVA +D+MALPPCH +FQFYV +G LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRHIVSAWNVAEVDQMALPPCHTMFQFYVADGALSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V+G + GEFIHTLGD HLY NH +QA LQL+R+PR LP++ + P++ ++ 
Sbjct: 181 YALLTGMMAQVVGLRPGEFIHTLGDAHLYANHLDQARLQLTRAPRPLPELELKPDVTEID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D  +R+Y+PH AI A ++V
Sbjct: 241 AFTVDDIVIRNYDPHPAIKAPIAV 264


>gi|30248582|ref|NP_840652.1| thymidylate synthase [Nitrosomonas europaea ATCC 19718]
 gi|62901360|sp|Q82WU3|TYSY_NITEU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|30180177|emb|CAD84479.1| Thymidylate synthase [Nitrosomonas europaea ATCC 19718]
          Length = 264

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+QYLDL+RHV+++G  + DRTG GT S FGYQMRFDL  GFPL+TTKK H KS++HELL
Sbjct: 1   MYQYLDLMRHVLQYGHKKSDRTGTGTLSVFGYQMRFDLQTGFPLVTTKKCHVKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ YL R+GVSIWDEWAD++G+LGPIYG QWRSW   DG VIDQIS ++Q ++
Sbjct: 61  WFLRGETNIDYLKRNGVSIWDEWADENGDLGPIYGHQWRSWAASDGTVIDQISQVIQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  +DKM L PCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ETPDSRRMIVSAWNVGDLDKMKLAPCHVLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT+M+A     Q GEF+HT GD HLY NH EQA LQL R PR LP M +N  + ++ 
Sbjct: 181 YSLLTLMIAQCCDLQPGEFVHTFGDAHLYLNHLEQARLQLEREPRALPAMQLNSTVRNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YEDFTL  Y+P+  I A V+V
Sbjct: 241 DFGYEDFTLHDYDPYPPIKAPVAV 264


>gi|75676536|ref|YP_318957.1| thymidylate synthase [Nitrobacter winogradskyi Nb-255]
 gi|123773189|sp|Q3SQ36|TYSY_NITWN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|74421406|gb|ABA05605.1| thymidylate synthase [Nitrobacter winogradskyi Nb-255]
          Length = 264

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+QY DLL  ++  G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+ ++S+VHELL
Sbjct: 1   MNQYHDLLERILGEGTEKHDRTGTGTLSVFGHQMRFDLASGFPMLTTKKLPFRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ YL  +GVSIWDEWAD +G+LGP+YG QWRSWP  DG  IDQI++++  ++
Sbjct: 61  WFLRGETNIKYLKDNGVSIWDEWADANGDLGPVYGSQWRSWPARDGRGIDQIANVIDLIQ 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADVDRMALPPCHCLFQFYVAGGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+H+LGD HLY+NH +QA LQLSR  R LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHLDQARLQLSRPTRPLPTMTINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF L +Y+PH  I A+V+V
Sbjct: 241 AFRYEDFRLENYDPHPHIKAEVAV 264


>gi|49083028|gb|AAT50914.1| PA0342 [synthetic construct]
          Length = 265

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/264 (66%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + D TG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL
Sbjct: 1   MKQYLDLMRHVREHGTFKSDCTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  L+
Sbjct: 61  WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMAMLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L  YE H  I A V+V
Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264


>gi|323344523|ref|ZP_08084748.1| thymidylate synthase [Prevotella oralis ATCC 33269]
 gi|323094650|gb|EFZ37226.1| thymidylate synthase [Prevotella oralis ATCC 33269]
          Length = 264

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++K G  + DRTG GT S FG QMRF+L +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MRQYLDLLDRILKEGVKKGDRTGTGTISIFGNQMRFNLEEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV +L  HGV IW+EWAD++G+LGP+YG QWRSWPDY G  IDQI +++  +R
Sbjct: 61  WFLKGDTNVRFLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLNQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A +D MALPPCHCLFQFYV NG+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 QHPDSRRMIVSAWNPAEVDDMALPPCHCLFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V G + G+FIHT GD HLY NH EQA LQLSR+PR LP+M++NP++ DL 
Sbjct: 181 YALLLMMMAQVTGLKAGDFIHTTGDTHLYLNHLEQAKLQLSRTPRALPKMLLNPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF L+ Y+P   I A+VSV
Sbjct: 241 AFHFEDFELKDYDPLPHISAQVSV 264


>gi|115372682|ref|ZP_01459989.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|310823834|ref|YP_003956192.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|115370403|gb|EAU69331.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|309396906|gb|ADO74365.1| Thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 264

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/264 (66%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+K G+ R DRTG GT S FG Q+RFDL++GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLDRVLKDGTKRGDRTGTGTLSLFGPQLRFDLTQGFPLLTTKKLHLKSILHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W LRGD++V  L   GV+IWDEWAD  G LGP+YG QWRSW    G  IDQ+  +V+SLR
Sbjct: 61  WMLRGDTSVRSLQAQGVTIWDEWADAQGNLGPVYGHQWRSWSGPQGQSIDQMRQVVESLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA +  M LPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPESRRHIVSAWNVADLPAMKLPPCHILFQFYVANGRLSCQLYQRSADLFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G    EFIHTLGD HLY NH EQA  QL+R PR LP+M +NP + DL 
Sbjct: 181 YALLTMMVAQATGLTAHEFIHTLGDAHLYLNHVEQARTQLAREPRPLPRMQLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDFTL+ YEPH AI A V+V
Sbjct: 241 AFRYEDFTLQEYEPHPAIKAPVAV 264


>gi|146309227|ref|YP_001189692.1| thymidylate synthase [Pseudomonas mendocina ymp]
 gi|166231725|sp|A4Y044|TYSY_PSEMY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145577428|gb|ABP86960.1| thymidylate synthase [Pseudomonas mendocina ymp]
          Length = 264

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFP++TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRHVREHGTFKEDRTGTGTYSVFGYQMRFDLADGFPIVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  +G  IDQI+ +++ +R
Sbjct: 61  WFLQGDTNIKYLKDNGVSIWDEWADENGDLGPVYGYQWRSWPAPNGESIDQIAKLIEMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   Q GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DLL
Sbjct: 181 YALLTLMVAQVCDLQPGEFIWTGGDCHLYANHIEQADLQLTRQPLPLPTMKLNPEVKDLL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE H  I A V+V
Sbjct: 241 AFRFEDFELVGYEAHPHIKAPVAV 264


>gi|321311648|ref|YP_004203935.1| thymidylate synthase [Bacillus subtilis BSn5]
 gi|320017922|gb|ADV92908.1| thymidylate synthase [Bacillus subtilis BSn5]
          Length = 267

 Score =  374 bits (961), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 4   MKQYKDLCRHVLEHGEKKEDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 64  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 123

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 124 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 183

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL R  R LPQ+     +  + 
Sbjct: 184 YALLTMMIAHVTGLESGEFIHTFGDVHIYQNHIEQINLQLERDVRPLPQLRFARKVDSIF 243

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF +  Y+PH  I   VSV
Sbjct: 244 NFAFEDFIIEDYDPHPHIKGAVSV 267


>gi|91775259|ref|YP_545015.1| thymidylate synthase [Methylobacillus flagellatus KT]
 gi|91775403|ref|YP_545159.1| thymidylate synthase [Methylobacillus flagellatus KT]
 gi|115502470|sp|Q9RAM7|TYSY_METFK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91709246|gb|ABE49174.1| thymidylate synthase [Methylobacillus flagellatus KT]
 gi|91709390|gb|ABE49318.1| thymidylate synthase [Methylobacillus flagellatus KT]
          Length = 264

 Score =  374 bits (961), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G  + DRTG GT S FGYQMRFDLS+GFPLLTTKKVH KS++HELL
Sbjct: 1   MKVYHDLMRHVLEQGHKKEDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV+IWDEWAD +G LGP+YG QWR+WP  DG  IDQIS ++ +++
Sbjct: 61  WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGGHIDQISEVIAAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +DKM LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADVDKMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+F+HTLGD H+Y NH EQ   QLSR P  LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVCDLKLGDFVHTLGDAHIYLNHLEQVKEQLSREPYPLPVMRINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDFTL +Y+ H AI A V+V
Sbjct: 241 AFRFEDFTLENYQSHPAIKAPVAV 264


>gi|312887675|ref|ZP_07747266.1| thymidylate synthase [Mucilaginibacter paludis DSM 18603]
 gi|311299854|gb|EFQ76932.1| thymidylate synthase [Mucilaginibacter paludis DSM 18603]
          Length = 273

 Score =  374 bits (961), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 171/273 (62%), Positives = 209/273 (76%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV+  G+ + DRTG GT S FGYQMRF+L  GFPL+TTKK+H KS++HEL+
Sbjct: 1   MKQYLDLMRHVLDTGAQKHDRTGTGTISVFGYQMRFNLQDGFPLVTTKKLHLKSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD DG LGP+YG QWRSWP  DG  IDQIS+++ +L+
Sbjct: 61  WFLSGDTNIRYLKENGVRIWDEWADADGNLGPVYGYQWRSWPKPDGGHIDQISNVINTLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLYQRSGDVF 171
            +P SRR +VSAWNVA +++MALPPCH LFQFYV           GKLSCQLYQRS D+F
Sbjct: 121 NNPDSRRIMVSAWNVADVEQMALPPCHSLFQFYVQPADAAKGETRGKLSCQLYQRSADIF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V   + G+FIHTLGD HLYNNH EQ  LQLSR PR LP M 
Sbjct: 181 LGVPFNIASYALLTMMVAQVCNLEAGDFIHTLGDAHLYNNHIEQTRLQLSREPRPLPLMK 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           INP++ D+  F++EDF L +Y+PH  I   V+V
Sbjct: 241 INPDVKDIFGFKFEDFVLENYDPHPHIKGAVAV 273


>gi|92118240|ref|YP_577969.1| thymidylate synthase [Nitrobacter hamburgensis X14]
 gi|123265118|sp|Q1QJT8|TYSY_NITHX RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91801134|gb|ABE63509.1| thymidylate synthase [Nitrobacter hamburgensis X14]
          Length = 264

 Score =  374 bits (960), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+QY DLL  ++  G+++ DRTG GT S FG+QMRF+L+ GFP+LTTKK+  KS+VHELL
Sbjct: 1   MNQYHDLLERILSDGAEKHDRTGTGTLSIFGHQMRFNLASGFPMLTTKKLPLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV YL  HGVSIWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+++V  + 
Sbjct: 61  WFLKGETNVRYLREHGVSIWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIANVVDMIG 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A +DKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RSPDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+H+LGD HLY NH +QA LQL+R  R+LP M INP +  + 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYLNHLDQARLQLTRPTRSLPTMTINPEVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF L +Y+PH  I A+V+V
Sbjct: 241 AFRYEDFKLENYDPHPHIKAEVAV 264


>gi|254468912|ref|ZP_05082318.1| thymidylate synthase [beta proteobacterium KB13]
 gi|207087722|gb|EDZ65005.1| thymidylate synthase [beta proteobacterium KB13]
          Length = 264

 Score =  374 bits (960), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ G  + DRTG GT S FGYQ+RFDLS+ FPLLTTKK+H KSV+HELL
Sbjct: 1   MRQYLDLLNHVLEHGDKKEDRTGTGTISVFGYQIRFDLSEKFPLLTTKKIHLKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N+ YL  +GVSIWDEWAD+ G+LGP+YG QWRSW   DG  IDQIS+++++++
Sbjct: 61  WFLKGSTNIGYLKENGVSIWDEWADEHGDLGPVYGSQWRSWQTSDGRTIDQISNLIENIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +DKM LPPCHC FQFYV N KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGDVDKMKLPPCHCFFQFYVANDKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V     GEF+HTLGD H+Y+NH EQ   QLSR  + LP M INP++ D+ 
Sbjct: 181 YALLTLMIAQVTNLAPGEFVHTLGDAHIYSNHIEQVKQQLSREAKDLPIMKINPHVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+Y+DF + +Y+PH  I A V+V
Sbjct: 241 SFKYDDFEILNYDPHPLIKAPVAV 264


>gi|6647289|gb|AAF21131.1|L78665_5 thymidylate synthase [Methylobacillus flagellatus]
          Length = 264

 Score =  374 bits (959), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 168/264 (63%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G  + DRTG GT S FGYQMRFDLS+GFPLLTTKKVH  +++HELL
Sbjct: 1   MKVYHDLMRHVLEQGHKKEDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKVHLNAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV+IWDEWAD +G LGP+YG QWR+WP  DG  IDQIS ++ +++
Sbjct: 61  WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGGHIDQISEVIAAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNVA +DKM LPPCH LFQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVADVDKMELPPCHALFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+F+HTLGD H+Y NH EQ   QLSR P  LP M INP + D+ 
Sbjct: 181 YALLTMMVARVCDLELGDFVHTLGDAHIYLNHLEQVKEQLSREPYPLPVMRINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDFTL +Y+ H AI A V+V
Sbjct: 241 AFRFEDFTLENYQSHPAIKAPVAV 264


>gi|189502717|ref|YP_001958434.1| hypothetical protein Aasi_1410 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498158|gb|ACE06705.1| hypothetical protein Aasi_1410 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 264

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL HV+  G +++DRTG GT+S FGYQMRF+L++GFPL+TTKK+H KS+++ELL
Sbjct: 1   MKQYLSLLGHVLHNGQEKKDRTGTGTKSIFGYQMRFNLAEGFPLMTTKKLHMKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL+++GV+IWDEWAD  G LGPIYG QWRSWP  +   +DQI  +++ ++
Sbjct: 61  WFLQGNTNIGYLNQNGVTIWDEWADAQGNLGPIYGYQWRSWPTSNHGKVDQIEQVIKQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR +VSAWNV  +DKMALPPCH LFQFYV N KLSCQLYQRS D+FLGIPFNIAS
Sbjct: 121 ANPDSRRLLVSAWNVGELDKMALPPCHVLFQFYVANNKLSCQLYQRSADIFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + GEFIHTLGD HLYNNH EQA LQLSR+PR LP + +N  + D+ 
Sbjct: 181 YALLTTMVAQVCDLEVGEFIHTLGDAHLYNNHIEQAQLQLSRAPRPLPTLKVNSAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+Y+DF + +Y P+ +I A ++V
Sbjct: 241 AFQYDDFCIENYNPYPSIKAPIAV 264


>gi|110637694|ref|YP_677901.1| thymidylate synthase [Cytophaga hutchinsonii ATCC 33406]
 gi|123163654|sp|Q11VK5|TYSY_CYTH3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|110280375|gb|ABG58561.1| thymidylate synthase [Cytophaga hutchinsonii ATCC 33406]
          Length = 264

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++H++  G  + DRTG GT S FGYQMRF+L +GFPLLTTKK+H +S+ HELL
Sbjct: 1   MKQYHDLMQHILDQGVKKEDRTGTGTVSVFGYQMRFNLQEGFPLLTTKKLHMRSITHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G LGP+YG QWRSWP  DG  IDQI+++V  ++
Sbjct: 61  WFLQGDTNIKYLKDNNVSIWDEWADENGNLGPVYGYQWRSWPTPDGKHIDQITNVVNMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I+KM LPPCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPDSRRLIVSAWNVGEIEKMKLPPCHAFFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q G+F+HTLGD HLY+NH EQA LQLSR  R LP M INP++  + 
Sbjct: 181 YALLTMMVAQVCGLQAGDFVHTLGDAHLYSNHLEQAKLQLSRDFRPLPAMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL  Y+PH  I A V+V
Sbjct: 241 DFKFEDFTLEGYDPHPHIKAAVAV 264


>gi|146280809|ref|YP_001170962.1| thymidylate synthase [Pseudomonas stutzeri A1501]
 gi|145569014|gb|ABP78120.1| thymidylate synthase [Pseudomonas stutzeri A1501]
          Length = 272

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL
Sbjct: 9   MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELL 68

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IWDEWAD++GELGP+YG QWRSWP  +G  IDQI++++  ++
Sbjct: 69  WFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIK 128

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 129 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 188

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   + GEFI + GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 189 YALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQADLQLTREPLPLPTMKLNPEVKDLF 248

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE H  I A V+V
Sbjct: 249 AFRFEDFELVGYEAHPHIKAPVAV 272


>gi|293375484|ref|ZP_06621763.1| thymidylate synthase [Turicibacter sanguinis PC909]
 gi|325844947|ref|ZP_08168312.1| thymidylate synthase [Turicibacter sp. HGF1]
 gi|292645884|gb|EFF63915.1| thymidylate synthase [Turicibacter sanguinis PC909]
 gi|325488997|gb|EGC91386.1| thymidylate synthase [Turicibacter sp. HGF1]
          Length = 264

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ G+ + DRTG GT STFGYQMRFDL++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLDLLNHVLENGTTKGDRTGTGTISTFGYQMRFDLAEGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ GD+NV YL  +GV IW+EWAD++G LGP+YG QWR W   +G VIDQ++ +V+ ++
Sbjct: 61  WFISGDTNVKYLQENGVRIWNEWADEEGNLGPVYGKQWRRWEGANGTVIDQLAEVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNV  +D+MALPPCH LFQFYV++GKLSC LYQRS D+FLG+PFNIAS
Sbjct: 121 TNPNSRRLIVNAWNVGELDQMALPPCHLLFQFYVNDGKLSCMLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HTLGD H+Y NH EQ  +QL R  R LP M +N ++  + 
Sbjct: 181 YALLTMMIAQVTGLEVGEFVHTLGDAHIYQNHLEQVKIQLGRDIRPLPTMKLNQDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDFTL  Y+PH  +   V+V
Sbjct: 241 DFKYEDFTLEGYDPHPLLKGVVAV 264


>gi|325860307|ref|ZP_08173429.1| thymidylate synthase [Prevotella denticola CRIS 18C-A]
 gi|325482186|gb|EGC85197.1| thymidylate synthase [Prevotella denticola CRIS 18C-A]
          Length = 264

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  ++  G+++ DRTG GT S FG QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLNLLNCILTEGAEKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G LGP+YG QWRSWPDY G  IDQIS++V+ +R
Sbjct: 61  WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQISNVVEMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HCPESRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFRYEDF L  Y P   I A+V+V
Sbjct: 241 SFRYEDFELTDYHPWPHISAEVAV 264


>gi|330505459|ref|YP_004382328.1| thymidylate synthase [Pseudomonas mendocina NK-01]
 gi|328919745|gb|AEB60576.1| thymidylate synthase [Pseudomonas mendocina NK-01]
          Length = 264

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFP++TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRHVREHGTFKEDRTGTGTYSVFGYQMRFDLADGFPIVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD++G LGP+YG QWRSWP  +G  IDQI+ +++ ++
Sbjct: 61  WFLQGDTNIKYLKDNGVSIWDEWADENGNLGPVYGYQWRSWPAPNGESIDQIAKLIEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   Q GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DLL
Sbjct: 181 YALLTLMVAQVCDLQPGEFIWTGGDCHLYANHIEQADLQLTRQPLPLPTMKLNPEVKDLL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  YE H  I A V+V
Sbjct: 241 AFKFEDFELVGYEAHPHIKAPVAV 264


>gi|172045633|sp|A4VGL9|TYSY_PSEU5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|327479077|gb|AEA82387.1| thymidylate synthase [Pseudomonas stutzeri DSM 4166]
          Length = 264

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL
Sbjct: 1   MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IWDEWAD++GELGP+YG QWRSWP  +G  IDQI++++  ++
Sbjct: 61  WFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   + GEFI + GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQADLQLTREPLPLPTMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE H  I A V+V
Sbjct: 241 AFRFEDFELVGYEAHPHIKAPVAV 264


>gi|325104763|ref|YP_004274417.1| thymidylate synthase [Pedobacter saltans DSM 12145]
 gi|324973611|gb|ADY52595.1| thymidylate synthase [Pedobacter saltans DSM 12145]
          Length = 264

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV+  G  + DRTG GT S FGYQMRF+L +GFPLLTTKK+H KS++HEL+
Sbjct: 1   MKQYHDLMQHVLDNGVQKHDRTGTGTISVFGYQMRFNLEEGFPLLTTKKLHLKSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G LGP+YG QWRSWP  DG  IDQIS I+  ++
Sbjct: 61  WFLSGDTNIKYLKENGVRIWDEWADEEGNLGPVYGSQWRSWPTPDGRHIDQISQIISQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I+ MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVAEIENMALPPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+FIHTLGD HLYNNH EQA LQLSR  R LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVCDLKPGDFIHTLGDAHLYNNHLEQAKLQLSRDFRPLPTMRINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 GFKFEDFVLENYDPHPHIKGAVAV 264


>gi|299131893|ref|ZP_07025088.1| thymidylate synthase [Afipia sp. 1NLS2]
 gi|298592030|gb|EFI52230.1| thymidylate synthase [Afipia sp. 1NLS2]
          Length = 264

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL  ++  G+ + DRTG GT S FG+QMRF+L+ GFP+ TTKK+ +K++VHELL
Sbjct: 1   MHQYHDLLERILSDGAQKGDRTGTGTLSVFGHQMRFNLAAGFPMTTTKKLPFKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV+IWDEWAD +G+LGP+YG QWRSW   DG  IDQI+++++ +R
Sbjct: 61  WFLAGDTNVRYLQNNGVTIWDEWADANGDLGPVYGKQWRSWQAPDGRSIDQIANLIRMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A +D MALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TTPDSRRLIVSAWNPADVDHMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V     G+FIHTLGD HLY+NH EQA LQL+R PR LP + INP + D+ 
Sbjct: 181 YALLTMMIAQVTDLAPGDFIHTLGDAHLYSNHLEQARLQLTRRPRALPAVHINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L +Y+PH  I A+V+V
Sbjct: 241 GFRYEDFKLENYDPHPHIKAEVAV 264


>gi|220928734|ref|YP_002505643.1| thymidylate synthase [Clostridium cellulolyticum H10]
 gi|254790234|sp|B8I0T8|TYSY_CLOCE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219999062|gb|ACL75663.1| thymidylate synthase [Clostridium cellulolyticum H10]
          Length = 264

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL +H++  G  + DRTG GT STFGYQMRFDL KGFPLLTTKK+H KS++HELL
Sbjct: 1   MQQYLDLCKHILNNGIKKEDRTGTGTISTFGYQMRFDLQKGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ G++N+ YL  +GVSIWDEWAD++G LGP+YG QWRSW   DG  IDQ+  ++  ++
Sbjct: 61  WFISGNTNIKYLKDNGVSIWDEWADENGNLGPVYGHQWRSWDTADGRSIDQLKGVIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVS+WNV  I+KMALPPCHC +QFYV NG LSC LYQRS DVF+G+PFNIAS
Sbjct: 121 NNPDSRRLIVSSWNVGEIEKMALPPCHCFYQFYVVNGTLSCMLYQRSADVFIGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+L TMM+A   G + GEF+HTLGD H+Y NH EQ  LQLSR PR LP+M INP+I DL 
Sbjct: 181 YALFTMMIAQSCGLRAGEFVHTLGDAHIYLNHVEQVKLQLSRDPRPLPKMNINPDIKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+Y DFTL  Y+PH  I   V+V
Sbjct: 241 QFKYSDFTLTDYDPHPHIKGAVAV 264


>gi|296329488|ref|ZP_06871975.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674812|ref|YP_003866484.1| thymidylate synthase B [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|317412155|sp|E0U0H8|TYSY2_BACPZ RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2;
           AltName: Full=Thymidylate synthase B; Short=TS B;
           Short=TSase B
 gi|296153370|gb|EFG94232.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413056|gb|ADM38175.1| thymidylate synthase B [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 264

 Score =  371 bits (953), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLEHGEKKGDRTGTGTISTFGYQMRFHLQEGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL+R  R LP++     I  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLTRDVRPLPKLRFAREIDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF +  Y+PH  I   VSV
Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264


>gi|327402847|ref|YP_004343685.1| thymidylate synthase [Fluviicola taffensis DSM 16823]
 gi|327318355|gb|AEA42847.1| thymidylate synthase [Fluviicola taffensis DSM 16823]
          Length = 264

 Score =  371 bits (953), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+H++  G+ + DRTG GT STFGYQMR++L +GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYHDLLQHILDKGTFKGDRTGTGTLSTFGYQMRYNLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQIS+++  ++
Sbjct: 61  WFLQGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPTPDGGSIDQISNLIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNVA +D MALPPCH +FQFYV +GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 121 KNPNSRRLIVNAWNVAYVDNMALPPCHTMFQFYVADGKLSCQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEFIHTLGD HLY+NH +QA LQL R  R LP M INP + D+ 
Sbjct: 181 YALLTMMIAQVCDLKPGEFIHTLGDAHLYSNHLDQAKLQLERDFRPLPTMKINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y+PH  I A ++V
Sbjct: 241 GFKYEDFELLNYDPHPTIKAPIAV 264


>gi|297538294|ref|YP_003674063.1| thymidylate synthase [Methylotenera sp. 301]
 gi|297257641|gb|ADI29486.1| thymidylate synthase [Methylotenera sp. 301]
          Length = 264

 Score =  371 bits (953), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +LL HV+  G+ + DRTG GT S FGYQMRF+L +GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYTELLNHVLAHGNQKTDRTGTGTLSVFGYQMRFNLEEGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV IWDEWAD +G LGP+YG QWR+WP  DG  IDQI+ +V +++
Sbjct: 61  WFLQGSTNIAYLKENGVRIWDEWADDNGNLGPVYGYQWRNWPKPDGTHIDQITQVVNAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ   QLSR  R+LPQM INP + ++ 
Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYTNHMEQVHEQLSRDIRSLPQMHINPEVHNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +Y+PH AI   V+V
Sbjct: 241 DFKFEDFTLVNYDPHPAIKGLVAV 264


>gi|311940|emb|CAA49350.1| thymidylate synthase B [Bacillus subtilis]
 gi|448267|prf||1916395A thymidylate synthase B
          Length = 264

 Score =  371 bits (953), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLEHGEKKGDRTGTGTISTFGYQMRFHLQEGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL+R  R LP++     I  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLTRDLRPLPKLRFAREIDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF +  Y+PH  I   VSV
Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264


>gi|282858545|ref|ZP_06267716.1| thymidylate synthase [Prevotella bivia JCVIHMP010]
 gi|282588670|gb|EFB93804.1| thymidylate synthase [Prevotella bivia JCVIHMP010]
          Length = 264

 Score =  371 bits (953), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR +   G  + DRTG GT S FG+QMRF+++ GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLRRITTEGVKKEDRTGTGTLSVFGHQMRFNMADGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  HGV IW+EWAD++G+LGPIYG QWRSWPDY G  IDQI ++++ ++
Sbjct: 61  WFLNGDTNVKYLQEHGVRIWNEWADENGDLGPIYGHQWRSWPDYKGGAIDQIKNVLEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWN A ++ MALPPCHCLFQFYV +GKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 NTPDSRRMLVSAWNPAEVENMALPPCHCLFQFYVASGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY NH EQ +LQL+R+PR LP+M INP++ DL 
Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQVELQLTRTPRPLPKMNINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF YEDF L  Y P+  I   V+V
Sbjct: 241 SFNYEDFQLEDYAPYPHISGIVAV 264


>gi|294500806|ref|YP_003564506.1| thymidylate synthase [Bacillus megaterium QM B1551]
 gi|295706151|ref|YP_003599226.1| thymidylate synthase [Bacillus megaterium DSM 319]
 gi|294350743|gb|ADE71072.1| thymidylate synthase [Bacillus megaterium QM B1551]
 gi|294803810|gb|ADF40876.1| thymidylate synthase [Bacillus megaterium DSM 319]
          Length = 264

 Score =  371 bits (952), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L  HV+  G+ + DRTG GT STFGYQMRF+L +GFP+LTTKK+H KS++HELL
Sbjct: 1   MKQYLELCEHVLANGTKKEDRTGTGTISTFGYQMRFNLQEGFPVLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSWP  DG  IDQI++++  ++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADENGELGPVYGHQWRSWPTPDGEKIDQITNVINQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV+ +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRLMVSAWNVSDVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+F+HT GD H+Y+NH EQ +LQL+R P  LP+M INP++  + 
Sbjct: 181 YALLTMMVAQVCDLEPGDFVHTFGDAHIYSNHIEQVNLQLTREPHALPKMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y  H  I   VSV
Sbjct: 241 DFKFEDFELVDYNAHPHIKGAVSV 264


>gi|302877663|ref|YP_003846227.1| thymidylate synthase [Gallionella capsiferriformans ES-2]
 gi|302580452|gb|ADL54463.1| thymidylate synthase [Gallionella capsiferriformans ES-2]
          Length = 264

 Score =  371 bits (952), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L++HV+  G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL
Sbjct: 1   MRTYLNLMQHVLDNGTKKSDRTGTGTVSVFGYQMRFDLAQGFPLVTTKKCHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N+ YL  HGV IWDEWAD+ G+LGP+YG QWRSW   DG VIDQI   V  L+
Sbjct: 61  WFLQGYTNIGYLKEHGVKIWDEWADEHGDLGPVYGHQWRSWEAVDGRVIDQIKIAVDQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVSEGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   + G+F+HT GD HLY NH EQ  LQLSR P  LP M INP++ D+ 
Sbjct: 181 YALLTLMMAQVCNLEPGDFVHTFGDAHLYLNHLEQTQLQLSREPHPLPMMHINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDFTL  Y+PH AI  KV+V
Sbjct: 241 SFKYEDFTLTGYDPHPAIKGKVAV 264


>gi|326201561|ref|ZP_08191432.1| LOW QUALITY PROTEIN: thymidylate synthase [Clostridium
           papyrosolvens DSM 2782]
 gi|325988161|gb|EGD48986.1| LOW QUALITY PROTEIN: thymidylate synthase [Clostridium
           papyrosolvens DSM 2782]
          Length = 264

 Score =  371 bits (952), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL +H++  G  + DRTG GT STFGYQMRFDL KGFPLLTTK +H KS++HELL
Sbjct: 1   MQQYLDLCKHILNNGIKKEDRTGTGTISTFGYQMRFDLQKGFPLLTTKNLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+  +++ ++
Sbjct: 61  WFISGETNIKYLKENGVSIWDEWADENGDLGPVYGHQWRSWSTPDGRSIDQLKGVLEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVS+WNV+ I+KMALPPCHC +QFYV NG LSC LYQRS DVF+G+PFNIAS
Sbjct: 121 NNPDSRRLIVSSWNVSDIEKMALPPCHCFYQFYVINGTLSCMLYQRSADVFIGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+L TMM+A   G + GEF+HTLGD H+Y NH EQ +LQLSR  R LP+M INP++ DL 
Sbjct: 181 YALFTMMIAQSCGLKAGEFVHTLGDAHIYLNHIEQVNLQLSRDTRALPKMNINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+Y DFTL  Y+PH  I   V+V
Sbjct: 241 DFKYSDFTLTDYDPHPNIKGAVAV 264


>gi|260591057|ref|ZP_05856515.1| thymidylate synthase [Prevotella veroralis F0319]
 gi|260536922|gb|EEX19539.1| thymidylate synthase [Prevotella veroralis F0319]
          Length = 264

 Score =  371 bits (952), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G  + DRTG GT S FG QMRF+L  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLDLLSRILNEGVHKGDRTGTGTLSVFGNQMRFNLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  HGV IW+EWAD+ G+LGP+YG QWRSWPDY G  IDQI++++  ++
Sbjct: 61  WFLRGDTNIHYLQEHGVRIWNEWADEHGDLGPVYGHQWRSWPDYKGGTIDQITNVLDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPNSRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY+NH EQA LQL+R+PR LP+M INP++ DL 
Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYSNHLEQAKLQLTRTPRPLPKMKINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+YEDF L  Y P+  I A+V+V
Sbjct: 241 AFKYEDFELVDYNPYPHISAEVAV 264


>gi|90419201|ref|ZP_01227111.1| thymidylate synthase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336138|gb|EAS49879.1| thymidylate synthase [Aurantimonas manganoxydans SI85-9A1]
          Length = 264

 Score =  370 bits (951), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V++ GSDR DRTG GTRS FG+QMRFDL+ GFP+LTTKK+HWKSVVHELL
Sbjct: 1   MRQYLDLLTRVMETGSDRPDRTGTGTRSVFGHQMRFDLADGFPMLTTKKLHWKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL+ +GV IWDEWAD+ G+LGP+YG QWRSWPDYDG  IDQI+ +V+++R
Sbjct: 61  WFLKGDTNIAYLNANGVRIWDEWADEHGDLGPVYGAQWRSWPDYDGGHIDQIAKVVEAIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWN AL+D+MALPPCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RTPQSRRLVVSAWNPALVDEMALPPCHCLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + G+F+HTLGD HLY+NH EQA LQL+R+P  LP + +NP I DL 
Sbjct: 181 YALLTAMVAQATGLKPGDFVHTLGDAHLYSNHVEQAQLQLTRTPLPLPTLTLNPAIDDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++D  L  YE H  I AKV+V
Sbjct: 241 AFGFDDIALEGYEAHPHIKAKVAV 264


>gi|221314417|ref|ZP_03596222.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319340|ref|ZP_03600634.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. JH642]
          Length = 267

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D  RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 4   MKQYKDFCRHVLEHGEKKGDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 64  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 123

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 124 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 183

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTM++A V G + GEFIHT GDVH+Y NH EQ +LQL R  R LPQ+     +  + 
Sbjct: 184 YALLTMIIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLERDVRPLPQLRFARKVDSIF 243

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF +  Y+PH  I   VSV
Sbjct: 244 NFAFEDFIIEDYDPHPHIKGAVSV 267


>gi|308173974|ref|YP_003920679.1| thymidylate synthase B [Bacillus amyloliquefaciens DSM 7]
 gi|307606838|emb|CBI43209.1| thymidylate synthase B [Bacillus amyloliquefaciens DSM 7]
 gi|328553100|gb|AEB23592.1| thymidylate synthase [Bacillus amyloliquefaciens TA208]
 gi|328912128|gb|AEB63724.1| thymidylate synthase B [Bacillus amyloliquefaciens LL3]
          Length = 264

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS ++  ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R  R LP++    N+  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF +  Y+PH  I   VSV
Sbjct: 241 DFAFEDFIIEDYDPHPHIKGAVSV 264


>gi|288926918|ref|ZP_06420817.1| thymidylate synthase [Prevotella buccae D17]
 gi|288336316|gb|EFC74698.1| thymidylate synthase [Prevotella buccae D17]
          Length = 264

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR ++  G+ + DRTG GT S FG+QMRF+L +G PLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLRRILDEGTPKGDRTGTGTLSVFGHQMRFNLEEGLPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LGP+YG QWRSWPDY G  IDQI +++  ++
Sbjct: 61  WFLKGDTNVRYLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWN A +D MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HTPDSRRMMVSAWNPAEVDDMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHT GD HLY NH  QA LQL+R+PR LP M +NP +  L 
Sbjct: 181 YALLTMMMAQVTGLRPGDFIHTTGDTHLYQNHLSQARLQLTRTPRPLPTMRLNPEVKSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDFTL +Y+P+  I A VSV
Sbjct: 241 DFRFEDFTLENYDPYDHIKATVSV 264


>gi|282881638|ref|ZP_06290301.1| thymidylate synthase [Prevotella timonensis CRIS 5C-B1]
 gi|281304397|gb|EFA96494.1| thymidylate synthase [Prevotella timonensis CRIS 5C-B1]
          Length = 264

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 165/264 (62%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+ ++  G ++ DRTG GT+S FG+QMRF++  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQPYLNLLQRILDEGIEKTDRTGTGTKSIFGHQMRFNMEDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGV IWDEWAD+DG LGP+YG QWRSWPDY+G  IDQI +++  ++
Sbjct: 61  WFLKGDTNIKYLKEHGVRIWDEWADEDGNLGPVYGHQWRSWPDYNGGTIDQIQNVINLIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +V+AWN A I++MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HHPDSRRMMVTAWNPAEIEQMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q GEFIHT GD HLY NH EQA LQL+R+PRTLPQM +NP++  L 
Sbjct: 181 YALLLQMMAQVTGLQVGEFIHTTGDTHLYLNHIEQAKLQLTRTPRTLPQMKLNPDVKSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L++Y P   I A V+V
Sbjct: 241 DFQYEDFELQNYNPWPHIKADVAV 264


>gi|327313463|ref|YP_004328900.1| thymidylate synthase [Prevotella denticola F0289]
 gi|326946204|gb|AEA22089.1| thymidylate synthase [Prevotella denticola F0289]
          Length = 264

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  ++  G+ + DRTG GT S FG QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLNLLNRILTEGAQKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G LGP+YG QWRSWPDY G  IDQIS++ + +R
Sbjct: 61  WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQISNVEEMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HCPESRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFRYEDF L  Y P   I A+V+V
Sbjct: 241 SFRYEDFELADYHPWPHISAEVAV 264


>gi|300021803|ref|YP_003754414.1| thymidylate synthase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523624|gb|ADJ22093.1| thymidylate synthase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 264

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR V   G  + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H KS++ ELL
Sbjct: 1   MQQYLDLLRRVRTEGVKKTDRTGTGTLSVFGHQMRFDLSEGFPLVTTKKLHVKSIIVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL  + VSIWDEWAD +GELGP+YG QWR+W   DG  IDQI  +V++L+
Sbjct: 61  WFLSGATNIEYLKANDVSIWDEWADPEGELGPVYGKQWRAWSAPDGETIDQIKEVVETLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A I +MAL PCHCL QFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRIIVSAWNPADIPRMALAPCHCLVQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NH EQADLQLSR+PR LP+M INP +  + 
Sbjct: 181 YALLTMMMAQVTGLEPGEFVHTFGDAHLYLNHLEQADLQLSRTPRALPRMKINPAVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF+L  Y+P   I A V+V
Sbjct: 241 DFKYEDFSLEGYDPWPHIKAPVAV 264


>gi|16079241|ref|NP_390065.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310096|ref|ZP_03591943.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221323615|ref|ZP_03604909.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|136604|sp|P11044|TYSY2_BACSU RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2;
           AltName: Full=Thymidylate synthase B; Short=TS B;
           Short=TSase B
 gi|143741|gb|AAA22852.1| thymidylate synthase B (thyB) [Bacillus subtilis]
 gi|1256640|gb|AAA96634.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634602|emb|CAB14100.1| thymidylate synthase B [Bacillus subtilis subsp. subtilis str. 168]
          Length = 264

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D  RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDFCRHVLEHGEKKGDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTM++A V G + GEFIHT GDVH+Y NH EQ +LQL R  R LPQ+     +  + 
Sbjct: 181 YALLTMIIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLERDVRPLPQLRFARKVDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF +  Y+PH  I   VSV
Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264


>gi|312113785|ref|YP_004011381.1| thymidylate synthase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218914|gb|ADP70282.1| thymidylate synthase [Rhodomicrobium vannielii ATCC 17100]
          Length = 264

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 168/264 (63%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR V   G+ R DRTG GT S FG Q+RFDL  GFPL+TTKK+H KS+VHELL
Sbjct: 1   MQTYLDLLRDVRDHGTRRDDRTGTGTLSLFGRQLRFDLEAGFPLVTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  +GVSIWDEWAD +G+LGP+YG QWRSWP+ D   IDQI+ +++++R
Sbjct: 61  WFLAGDTNTAYLKANGVSIWDEWADANGDLGPVYGAQWRSWPERDCGTIDQIAEVIRAIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR +VSAWN A + +MAL PCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TDPNSRRLVVSAWNPADLPRMALAPCHCLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM A V G + G+F+HT GDVHLY NH EQAD QL R PR LP+M +NP +  + 
Sbjct: 181 YALLTMMAAQVTGLRPGDFVHTFGDVHLYLNHREQADEQLGREPRPLPRMTLNPAVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y DF L  Y PH AI A V+V
Sbjct: 241 DFAYADFKLEGYAPHPAIKAPVAV 264


>gi|325282128|ref|YP_004254670.1| Thymidylate synthase [Odoribacter splanchnicus DSM 20712]
 gi|324313937|gb|ADY34490.1| Thymidylate synthase [Odoribacter splanchnicus DSM 20712]
          Length = 264

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G+++ DRTG GT S FG+QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MRQYLDLLDRILSEGAEKTDRTGTGTISVFGHQMRFDLQAGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD DG+LG IYG QWRSWP  DG  +DQI+ +V  ++
Sbjct: 61  WFLKGDTNVKYLQDHGVKIWNEWADADGDLGHIYGYQWRSWPRPDGTHLDQIAQVVHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   I+ MAL PCH LFQFYV  GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 121 NNPDSRRLIVSAWNAGDIENMALAPCHALFQFYVVGGKLSCQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G Q GEF+HTLGD H+Y NH EQ  LQLSR PR LPQM INP + D+L
Sbjct: 181 YALLTLMMAQVCGLQPGEFVHTLGDAHIYLNHIEQVRLQLSREPRALPQMHINPAVKDIL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH  I   +SV
Sbjct: 241 GFRYEDFELTGYDPHPHIKGAISV 264


>gi|255011158|ref|ZP_05283284.1| thymidylate synthase [Bacteroides fragilis 3_1_12]
 gi|313148970|ref|ZP_07811163.1| thymidylate synthase [Bacteroides fragilis 3_1_12]
 gi|313137737|gb|EFR55097.1| thymidylate synthase [Bacteroides fragilis 3_1_12]
          Length = 264

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRFDL +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLAEGTEKGDRTGTGTISVFGHQMRFDLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD+ G+LG IYG QWRSWP+YDG  IDQIS  V +++
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADEKGDLGHIYGYQWRSWPNYDGGFIDQISEAVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHTLGD H+Y NH EQ  LQLSR PRTLPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGEFIHTLGDAHIYLNHLEQVKLQLSREPRTLPQMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L +Y+PH  I  KV+V
Sbjct: 241 DFRFEDFELVNYDPHPHIAGKVAV 264


>gi|15616013|ref|NP_244318.1| thymidylate synthase [Bacillus halodurans C-125]
 gi|25091494|sp|Q9K7B5|TYSY_BACHD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|10176074|dbj|BAB07170.1| thymidylate synthase B [Bacillus halodurans C-125]
          Length = 264

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L RHV++ G++R DRTG GT S FGYQMRFDL +GFP++TTKK+H +S++HELL
Sbjct: 1   MEQYLELCRHVLEHGTERSDRTGTGTISVFGYQMRFDLQEGFPVVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  +GV IW+EWAD++GELGP+YG QWRSW   +G  +DQIS +V++++
Sbjct: 61  WFLKGETNIAYLQENGVRIWNEWADENGELGPVYGKQWRSWEGANGKTVDQISQVVEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A I+ MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HQPDSRRLIVSAWNAAEIEDMALAPCHCLFQFYVQDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + GEF+HT GD H+Y NH EQ  LQL+R PR LP+M +NP +  L 
Sbjct: 181 YALLTKMIAQVCDLEEGEFVHTFGDAHIYLNHIEQVKLQLTREPRPLPEMRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L  Y+PH  I  +VSV
Sbjct: 241 DFTFDDFELVGYDPHPHIKGEVSV 264


>gi|298293052|ref|YP_003694991.1| thymidylate synthase [Starkeya novella DSM 506]
 gi|296929563|gb|ADH90372.1| thymidylate synthase [Starkeya novella DSM 506]
          Length = 264

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +LL  V++ G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK+H +S++HELL
Sbjct: 1   MRQYHELLERVLREGTRKDDRTGTGTLSLFGHQMRFDLAEGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  +GVSIWDEWAD +G+LGP+YG QWRSWPD  G VIDQI+ ++  +R
Sbjct: 61  WFLAGDTNIAYLKENGVSIWDEWADANGDLGPVYGHQWRSWPDGRGGVIDQIAQVLSDIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A + +MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADVPQMALPPCHCLFQFYVLDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HTLGD HLY NH EQA  QLSR+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQVTGLKPGDFVHTLGDAHLYVNHVEQAHEQLSRAPRKLPALKLNPAVDDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|254429983|ref|ZP_05043690.1| thymidylate synthase [Alcanivorax sp. DG881]
 gi|196196152|gb|EDX91111.1| thymidylate synthase [Alcanivorax sp. DG881]
          Length = 277

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 168/277 (60%), Positives = 213/277 (76%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV + G+ + DRTG GT + FGYQMR+DLS+GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLRHVRENGTYKEDRTGTGTYAVFGYQMRYDLSQGFPMLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWD WA  +GELGP+YG QWRSW   DG VIDQIS +++ ++
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDGWATPEGELGPVYGEQWRSWKTPDGGVIDQISEVLEEIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN A++              K ALPPCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 RNPDSRRLVVSAWNPAVLPDPSISPDANAAAGKQALPPCHCLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GD+FLG+PFNIASY+LLT+M+A V   Q G+F+HTLGD HLY+NH EQAD QL+R+P  L
Sbjct: 181 GDIFLGVPFNIASYALLTLMMAQVCDLQPGDFVHTLGDAHLYSNHLEQADTQLARTPGPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +F ++DFT+ +YEP A I A V++
Sbjct: 241 PTMTLNPAVKDLFAFTFDDFTVSNYEPAAHIKAPVAI 277


>gi|1359501|emb|CAA90532.1| thymidylate synthetase [Bacillus amyloliquefaciens]
          Length = 282

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L  GFP+LTTKK+H+KS+ HELL
Sbjct: 19  MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQGGFPMLTTKKLHFKSIAHELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS ++  ++
Sbjct: 79  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 138

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 139 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 198

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R  R LP++    N+  + 
Sbjct: 199 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 258

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF +  Y+PH  I   VSV
Sbjct: 259 DFAFEDFIIEDYDPHPHIKGAVSV 282


>gi|6686339|sp|P54081|TYSY2_BACAM RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2;
           AltName: Full=Thymidylate synthase B; Short=TS B;
           Short=TSase B
          Length = 264

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L  GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQGGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS ++  ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R  R LP++    N+  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF +  Y+PH  I   VSV
Sbjct: 241 DFAFEDFIIEDYDPHPHIKGAVSV 264


>gi|92114690|ref|YP_574618.1| thymidylate synthase [Chromohalobacter salexigens DSM 3043]
 gi|123387366|sp|Q1QUD9|TYSY_CHRSD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91797780|gb|ABE59919.1| thymidylate synthase [Chromohalobacter salexigens DSM 3043]
          Length = 264

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV++ G ++ DRTG GT S FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MQPYLDLMRHVLENGVEKSDRTGTGTLSVFGHQMRFDLAAGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  + V IWDEWAD++G+LGP+YG QWRSWP  DG  +DQI+++V+ ++
Sbjct: 61  WFLRGDTNIAYLKENRVRIWDEWADENGDLGPVYGYQWRSWPRPDGGHVDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       GEF+HTLGD HLY NH EQA LQLSR PR LP++++NP + D+ 
Sbjct: 181 YALLTHMVAQACDLAPGEFVHTLGDAHLYLNHLEQARLQLSREPRALPRLVLNPRVKDVF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++D  +  Y+PH  I A+V+V
Sbjct: 241 AFTFDDIAIEDYDPHPHIKAEVAV 264


>gi|154686429|ref|YP_001421590.1| thymidylate synthase [Bacillus amyloliquefaciens FZB42]
 gi|166231688|sp|A7Z5T3|TYSY_BACA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|154352280|gb|ABS74359.1| ThyB [Bacillus amyloliquefaciens FZB42]
          Length = 264

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS ++  ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ID MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDHMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R  R LP++    N+  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF +  Y+PH  I   VSV
Sbjct: 241 DFTFEDFIIEDYDPHPHIKGAVSV 264


>gi|311746545|ref|ZP_07720330.1| thymidylate synthase [Algoriphagus sp. PR1]
 gi|126575445|gb|EAZ79777.1| thymidylate synthase [Algoriphagus sp. PR1]
          Length = 264

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 165/264 (62%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ ++  G  + DRTG GT+S FG+QMRFDLSKGFP++TTKK+H +S++ ELL
Sbjct: 1   MKQYHDLMQKILDEGVTKGDRTGTGTKSIFGHQMRFDLSKGFPVVTTKKLHLRSIIIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GDSN++YL  + VSIWDEWAD++G+LGP+YG QWR WPD  G  IDQI +++  ++
Sbjct: 61  WFLKGDSNINYLKENKVSIWDEWADENGDLGPVYGYQWRHWPDGKGGEIDQIKNLIHQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRRHIVSAWNVA +D+MALPPCH +FQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TKPDSRRHIVSAWNVADVDQMALPPCHTIFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+L TMM+A V   + G+F+HT GD HLY+NH EQA LQLSR  R LP M INP + D+ 
Sbjct: 181 YALFTMMIAQVCDLEVGDFVHTFGDAHLYSNHLEQAKLQLSREIRDLPTMKINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y+PH  I A V+V
Sbjct: 241 DFKYEDFELINYDPHPHIKAAVAV 264


>gi|313674832|ref|YP_004052828.1| thymidylate synthase [Marivirga tractuosa DSM 4126]
 gi|312941530|gb|ADR20720.1| thymidylate synthase [Marivirga tractuosa DSM 4126]
          Length = 264

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L++H++  G  + DRTG GT S FGYQMRFDLS+GFP++TTKK+H +S++HELL
Sbjct: 1   MKQYHELMKHILDKGVQKGDRTGTGTISVFGYQMRFDLSEGFPVVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++GELGP+YG QWR+WP  DG  IDQIS I+  ++
Sbjct: 61  WFLKGETNIKYLKENGVSIWDEWADENGELGPVYGSQWRNWPTPDGQHIDQISQIIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWNVA +  MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NTPNSRRIMVSAWNVADVPNMALPPCHALFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+FIHTLGD HLY+NH EQ +LQLSR P  LP+M INPN+ ++ 
Sbjct: 181 YALLTMMVAQVCDLEPGDFIHTLGDAHLYSNHLEQTELQLSREPYPLPKMKINPNVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y+ H  I A V+V
Sbjct: 241 DFKFEDFELVDYQYHPHIKAPVAV 264


>gi|288554022|ref|YP_003425957.1| thymidylate synthase [Bacillus pseudofirmus OF4]
 gi|288545182|gb|ADC49065.1| thymidylate synthase [Bacillus pseudofirmus OF4]
          Length = 264

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L  HV+K G  + DRTG GT STFGYQMRFDL++GFP LTTKK+H +S++HELL
Sbjct: 1   MDQYLALCEHVLKNGETKSDRTGTGTISTFGYQMRFDLAEGFPALTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IW+EWAD++G+LGP+YG QWRSW   +G V+DQIS +++ ++
Sbjct: 61  WFLKGDTNIGYLKENNVRIWNEWADENGDLGPVYGKQWRSWEGANGKVVDQISELIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ID+MAL PCHCLFQFYV++GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRLIVSAWNPAEIDEMALAPCHCLFQFYVNDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEF+HT GD H+Y+NH EQ  LQL+R PR LP+M IN  +  + 
Sbjct: 181 YALLTMMIAQVTDLEPGEFVHTFGDAHIYSNHVEQVKLQLTREPRALPKMKINKEVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F  EDF L  Y+PH  I  +VSV
Sbjct: 241 DFTIEDFELTDYDPHPHIKGEVSV 264


>gi|108764037|ref|YP_634079.1| thymidylate synthase [Myxococcus xanthus DK 1622]
 gi|108467917|gb|ABF93102.1| thymidylate synthase [Myxococcus xanthus DK 1622]
          Length = 267

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL HV+  G  + DRTG GT S FG Q+RFDL++GFPLLTTKKVH KS++HELL
Sbjct: 4   MQPYLSLLDHVLHHGVKKGDRTGTGTLSVFGPQLRFDLTQGFPLLTTKKVHTKSILHELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L GD+NV  L   GV+IWDEWA+ DG LGP+YG QWRSW   +G  IDQ+ ++V+ L+
Sbjct: 64  WMLAGDTNVHTLQAQGVTIWDEWANADGSLGPVYGHQWRSWTAPNGEHIDQMKALVEGLK 123

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHI+SAWNVA +  M LPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 124 KNPDSRRHIISAWNVADLPSMKLPPCHVLFQFYVANGRLSCQLYQRSADLFLGLPFNIAS 183

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLTMM+A V G Q  EFIHT+GD HLY NH EQA  QLSR PR LP++ INP + DL 
Sbjct: 184 YSLLTMMVAQVTGLQAHEFIHTVGDAHLYLNHVEQAKTQLSREPRPLPRIHINPEVTDLF 243

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+YEDFTL  Y+PH AI A V+V
Sbjct: 244 AFKYEDFTLEGYDPHPAIKAPVAV 267


>gi|309812530|ref|ZP_07706278.1| thymidylate synthase [Dermacoccus sp. Ellin185]
 gi|308433508|gb|EFP57392.1| thymidylate synthase [Dermacoccus sp. Ellin185]
          Length = 264

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 168/264 (63%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  LLR ++  G+ + DRTG GT S FG+QMRFDLS+GFP+LTTKK+H +S+  ELL
Sbjct: 1   MEQYHALLRRILDEGTRKDDRTGTGTLSVFGHQMRFDLSQGFPVLTTKKLHLRSIFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV++LH   +SIWDEWAD DG+LGPIYG QWRSWP  +G  IDQI+ +V+S+R
Sbjct: 61  WFLRGDTNVAWLHERKISIWDEWADPDGDLGPIYGHQWRSWPTPNGETIDQIARVVESVR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA +D MALPPCH +FQFYV +GKLSCQLYQRSGDVFLG+PFNIAS
Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHTMFQFYVADGKLSCQLYQRSGDVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G   G+F+HTLGD HLY NH +QA LQL+R+P+TLP +++NP++  L 
Sbjct: 181 YALLTHMVAQVTGLAVGDFVHTLGDAHLYVNHLDQARLQLTRTPKTLPTLVLNPDVTALD 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D  L  YE   AI A+V+V
Sbjct: 241 AFELDDIRLDGYEADPAIKAQVAV 264


>gi|303237299|ref|ZP_07323869.1| thymidylate synthase [Prevotella disiens FB035-09AN]
 gi|302482686|gb|EFL45711.1| thymidylate synthase [Prevotella disiens FB035-09AN]
          Length = 264

 Score =  367 bits (943), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +I  G  + DRTG GT S FG QMRF+L +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRIITDGVQKGDRTGTGTLSVFGNQMRFNLQEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++GELGP+YG QWRSWP+Y G  IDQIS +V  ++
Sbjct: 61  WFLKGDTNVKYLQEHGVRIWNEWADENGELGPVYGHQWRSWPNYKGGTIDQISDVVDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A ++ MALPPCHCLFQFYV N KLS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPNSRRMLVTAWNPAEVEDMALPPCHCLFQFYVANDKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G + G+F++T GD HLY NH EQA LQL+R PR LP+M INPN+  + 
Sbjct: 181 YALLLQMMAQATGLEVGDFVYTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPNVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y PH  I A+VSV
Sbjct: 241 DFQYEDFELIDYNPHPHIAAEVSV 264


>gi|294673977|ref|YP_003574593.1| thymidylate synthase [Prevotella ruminicola 23]
 gi|294472139|gb|ADE81528.1| thymidylate synthase [Prevotella ruminicola 23]
          Length = 264

 Score =  367 bits (943), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD+L  ++  G+ + DRTG GT S FG Q R++L  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDILNRILTEGTQKGDRTGTGTISIFGTQSRYNLDDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++GELGP+YG QWRSWPDY+G  IDQI  ++  L+
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADENGELGPVYGHQWRSWPDYNGGTIDQIQYVLDQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++KMALPPCH +FQFYV + +LS QLYQRS D FLG+PFNIAS
Sbjct: 121 NNPNSRRMIVSAWNVAEVNKMALPPCHTIFQFYVADDRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V GF+ G+FIHT GD HLY NH EQA LQL+R PR LP+MIINP++ +L 
Sbjct: 181 YALLLQMMAQVTGFKAGDFIHTTGDTHLYLNHIEQAKLQLTREPRPLPKMIINPDVKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF L  Y+PH  I A+VSV
Sbjct: 241 DFTFEDFQLEGYDPHPHIKAEVSV 264


>gi|302346549|ref|YP_003814847.1| thymidylate synthase [Prevotella melaninogenica ATCC 25845]
 gi|302150410|gb|ADK96671.1| thymidylate synthase [Prevotella melaninogenica ATCC 25845]
          Length = 264

 Score =  367 bits (943), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  ++  G+ + DRTG GT S FG+QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLNLLNRILTEGTQKGDRTGTGTLSIFGHQMRFDLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL  HGV IW+EWAD++GELGP+YG QWRSWPDY G  IDQI ++V+ ++
Sbjct: 61  WFLRGDTNVRYLQEHGVRIWNEWADENGELGPVYGHQWRSWPDYKGGTIDQIKNVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A ++ MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPNSRRMLVTAWNPAEVEDMALPPCHCLFQFYVADGRLSLQLYQRSADSFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLLQMIAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+P   I   V+V
Sbjct: 241 DFKYEDFELIGYDPLPHIPGVVAV 264


>gi|319786162|ref|YP_004145637.1| thymidylate synthase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464674|gb|ADV26406.1| thymidylate synthase [Pseudoxanthomonas suwonensis 11-1]
          Length = 264

 Score =  367 bits (943), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL HV+  G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLELLAHVLGHGTDKPDRTGTGTRSVFGWQMRFDLRQGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  + VSIWDEWAD  GELGP+YG QWR W   DG+ IDQI  +V+ ++
Sbjct: 61  WFLKGETNIAYLKENKVSIWDEWADGQGELGPVYGKQWRRWTGSDGSEIDQIRWVVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + KMAL PCH LFQFYV +G+LSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLLVSAWNVADLPKMALMPCHTLFQFYVADGRLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QLSR PR LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLQLNPEVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYED  +  Y+P  AI A V+V
Sbjct: 241 DFRYEDIAIEGYDPAPAIKAPVAV 264


>gi|194017003|ref|ZP_03055616.1| thymidylate synthase [Bacillus pumilus ATCC 7061]
 gi|194011609|gb|EDW21178.1| thymidylate synthase [Bacillus pumilus ATCC 7061]
          Length = 264

 Score =  367 bits (942), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L RHV++ G ++ DRTG GT STFGYQMRFDL +GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYKELCRHVLQHGDEKGDRTGTGTISTFGYQMRFDLQEGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELG +YG QWRSW   DG  +DQI+ ++  + 
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGELGRVYGAQWRSWASGDGETVDQITKLIHDIE 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ID+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPNSRRLIVSAWNPAEIDQMALPPCHCLFQFYVSHGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEF+HTLGD H+Y NH  Q  +QL R  RTLPQ+ I  ++  + 
Sbjct: 181 YALLTMMIAKVTNLEPGEFVHTLGDAHIYQNHLPQVKMQLEREERTLPQLRITRDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L +Y+PH  I  +VSV
Sbjct: 241 DFTFDDFVLENYDPHPHIKGEVSV 264


>gi|315608816|ref|ZP_07883792.1| thymidylate synthase [Prevotella buccae ATCC 33574]
 gi|315249510|gb|EFU29523.1| thymidylate synthase [Prevotella buccae ATCC 33574]
          Length = 264

 Score =  367 bits (942), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR ++  G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLRRILDEGTPKGDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LGP+YG QWRSWPDY G  IDQI +++  + 
Sbjct: 61  WFLKGDTNVRYLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLDQIM 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWN A +D MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 RTPDSRRMMVSAWNPAEVDDMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+FIHT GD HLY NH  QA LQL+R+PR LP M +NP +  L 
Sbjct: 181 YALLTMMMAQVTRLRPGDFIHTTGDTHLYLNHLSQARLQLTRTPRPLPTMRLNPEVKSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDFTL +Y+P+  I A VSV
Sbjct: 241 DFRFEDFTLENYDPYDHIKATVSV 264


>gi|157692684|ref|YP_001487146.1| thymidylate synthase [Bacillus pumilus SAFR-032]
 gi|166991227|sp|A8FEB9|TYSY_BACP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157681442|gb|ABV62586.1| thymidylate synthase B [Bacillus pumilus SAFR-032]
          Length = 264

 Score =  367 bits (941), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L RHV++ G ++ DRTG GT STFGYQMRFDL +GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYKELCRHVLQHGDEKGDRTGTGTISTFGYQMRFDLQEGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELG +YG QWRSW   DG  +DQI+ ++  + 
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGELGRVYGAQWRSWASGDGETVDQITKLIHDIE 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   ID+MALPPCHCLFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPNSRRLIVSAWNPGEIDQMALPPCHCLFQFYVSNGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEF+HTLGD H+Y NH  Q ++QL R  R LPQ+ I  ++  + 
Sbjct: 181 YALLTMMIAKVTNLEPGEFVHTLGDAHIYQNHLPQVNMQLEREERALPQLRITRDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L +Y+PH  I  +VSV
Sbjct: 241 DFTFDDFVLENYDPHPHIKGEVSV 264


>gi|171914370|ref|ZP_02929840.1| thymidylate synthase [Verrucomicrobium spinosum DSM 4136]
          Length = 264

 Score =  367 bits (941), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +Y  LL+ V++ G+ R+DRTGVG  S FG Q R+DLS GFP+LTTKK+H +S++HELL
Sbjct: 1   MLEYQRLLKKVLEHGNFRQDRTGVGAYSVFGEQSRYDLSAGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH + V+IWDEWAD++G LGP+YG QWR W   DG V DQI+ ++ S++
Sbjct: 61  WFLKGDTNIKYLHENKVTIWDEWADEEGNLGPVYGAQWRRWQGADGLVHDQIADVIASIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +PYSRRHIVSAWNVA I +MALPPCH +FQF+VD G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPYSRRHIVSAWNVARIGEMALPPCHLMFQFFVDQGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   Q GEF+HT GD+HLY NH +QA LQL R PR+LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVCDLQPGEFVHTFGDLHLYANHLDQARLQLEREPRSLPVMKINPEVRDID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +Y+P  AI A+++V
Sbjct: 241 GFKFEDFTLENYDPWPAIKAEIAV 264


>gi|87307092|ref|ZP_01089238.1| thymidylate synthase [Blastopirellula marina DSM 3645]
 gi|87290465|gb|EAQ82353.1| thymidylate synthase [Blastopirellula marina DSM 3645]
          Length = 264

 Score =  367 bits (941), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G  + DRTG GT S FG+QMRF L+ GFP +TTKK+H +S++HELL
Sbjct: 1   MRQYLDLMQRILDEGVRKEDRTGTGTLSIFGHQMRFRLADGFPAVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV+YL  + VSIWDEWAD+ GELGP+YG QWRSWP  DG  IDQI+++++ ++
Sbjct: 61  WFLQGATNVAYLRENKVSIWDEWADEAGELGPVYGYQWRSWPTPDGGHIDQITNLIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA + +M LPPCH LFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVADVPRMKLPPCHLLFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HT GD HLY NH +Q  LQLSR PR LP M INP + DLL
Sbjct: 181 YALLTMMVAQVTGLEPGDFVHTFGDAHLYTNHMDQTQLQLSREPRPLPTMRINPAVTDLL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L +Y+PH  I A V+V
Sbjct: 241 KFRFEDFELINYDPHPHISAPVAV 264


>gi|307565583|ref|ZP_07628063.1| thymidylate synthase [Prevotella amnii CRIS 21A-A]
 gi|307345742|gb|EFN91099.1| thymidylate synthase [Prevotella amnii CRIS 21A-A]
          Length = 264

 Score =  366 bits (940), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+ ++K G  R DRTGVGT S FG+QM F++  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYQDLLKRILKEGVKREDRTGVGTLSIFGHQMHFNMEDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LGP+YG QWRSWPDY G  IDQI +++  ++
Sbjct: 61  WFLKGDTNVKYLQEHGVKIWNEWADENGDLGPVYGHQWRSWPDYKGGSIDQIKNVLDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +V+AWN A +D+MALPPCHCLFQFYV  GKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 HSPSSRRMLVTAWNPAEVDEMALPPCHCLFQFYVAEGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLL  M+A V G + GEFIHT GD H+Y NH EQ  LQL+R+PR LP++IINP++ DL 
Sbjct: 181 YSLLLHMMAQVTGLKVGEFIHTTGDTHIYLNHLEQVKLQLTRTPRPLPKIIINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF Y+DF +  Y P+  I   V+V
Sbjct: 241 SFHYDDFKIEDYNPYPHIPGTVAV 264


>gi|118594685|ref|ZP_01552032.1| thymidylate synthase [Methylophilales bacterium HTCC2181]
 gi|118440463|gb|EAV47090.1| thymidylate synthase [Methylophilales bacterium HTCC2181]
          Length = 264

 Score =  366 bits (940), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQYLDLLRHV   G+ ++DRTG GT S FGYQMRFDL++GFPLLTTKK+H KSV++ELL
Sbjct: 1   MHQYLDLLRHVKSNGTVKKDRTGTGTISVFGYQMRFDLNEGFPLLTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV +L  +G+SIWDEWAD  G LGP+YG QWRSW  ++G  IDQI  ++  ++
Sbjct: 61  WFLTGDTNVKFLKDNGISIWDEWADDKGNLGPVYGHQWRSWSSHNGESIDQIKILIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ID+M LPPCH  FQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 VNPDSRRLIVSAWNVADIDQMKLPPCHAFFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HTLGD H+Y NH EQ   QLSR P+TLP M +N +I ++ 
Sbjct: 181 YALLTMMIAQVCGLRLGEFVHTLGDAHIYLNHEEQVTQQLSREPKTLPIMTLNKSIDNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF+L  Y+P   I A V+V
Sbjct: 241 DFTFDDFSLEGYDPEPLIKAPVAV 264


>gi|110835205|ref|YP_694064.1| thymidylate synthase [Alcanivorax borkumensis SK2]
 gi|123345289|sp|Q0VM06|TYSY_ALCBS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|110648316|emb|CAL17792.1| thyA [Alcanivorax borkumensis SK2]
          Length = 277

 Score =  366 bits (940), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 166/277 (59%), Positives = 212/277 (76%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV + G+ + DRTG GT + FGYQMR+DLS+GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLRHVREHGTYKEDRTGTGTYAVFGYQMRYDLSQGFPMLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWD WA  +GELGP+YG QWRSW   DG VIDQI+ +++ ++
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDGWATPEGELGPVYGEQWRSWKTADGGVIDQITEVLKEIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN A++              K ALPPCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 RNPDSRRLVVSAWNPAVLPDPSISPDANAAAGKQALPPCHCLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GD+FLG+PFNIASY+LLT+M+A V   Q G+F+HTLGD HLY+NH EQAD QL+R+P  L
Sbjct: 181 GDIFLGVPFNIASYALLTLMMAQVCDLQPGDFVHTLGDAHLYSNHLEQADTQLARTPGPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +F ++DFT+ +Y P A I A V++
Sbjct: 241 PTMTLNPAVKDLFAFTFDDFTVSNYNPDAHIKAPVAI 277


>gi|150004500|ref|YP_001299244.1| thymidylate synthase [Bacteroides vulgatus ATCC 8482]
 gi|166231690|sp|A6L1Q8|TYSY_BACV8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|149932924|gb|ABR39622.1| putative thymidylate synthase B [Bacteroides vulgatus ATCC 8482]
          Length = 264

 Score =  366 bits (939), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 168/264 (63%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRILTEGVHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD +G+LG IYG QWRSWPDY+G  IDQIS  +++++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV NG+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+F+HTLGD H+Y NH EQ  LQLSR PR LPQM INP+I D+ 
Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDF L +Y+P   I  KVSV
Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264


>gi|254882766|ref|ZP_05255476.1| thymidylate synthase [Bacteroides sp. 4_3_47FAA]
 gi|319643926|ref|ZP_07998501.1| thymidylate synthase [Bacteroides sp. 3_1_40A]
 gi|254835559|gb|EET15868.1| thymidylate synthase [Bacteroides sp. 4_3_47FAA]
 gi|317384450|gb|EFV65417.1| thymidylate synthase [Bacteroides sp. 3_1_40A]
          Length = 264

 Score =  366 bits (939), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 168/264 (63%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRILTEGIHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD +G+LG IYG QWRSWPDY+G  IDQIS  +++++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV NG+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+F+HTLGD H+Y NH EQ  LQLSR PR LPQM INP+I D+ 
Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDF L +Y+P   I  KVSV
Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264


>gi|325269975|ref|ZP_08136584.1| thymidylate synthase [Prevotella multiformis DSM 16608]
 gi|324987698|gb|EGC19672.1| thymidylate synthase [Prevotella multiformis DSM 16608]
          Length = 264

 Score =  366 bits (939), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  ++  G  + DRTG GT S FG QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLNLLDRILTEGIQKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G LGP+YG QWRSWPDY G  IDQI ++V+ +R
Sbjct: 61  WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQIKNVVEMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 NNPNSRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEF+HT GD HLY NH EQA LQL+R P  LP+M INP + D+ 
Sbjct: 181 YALLLQMMAQVTGLEAGEFVHTTGDTHLYLNHLEQARLQLTREPHPLPKMKINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF YEDF L  Y P   I A+VSV
Sbjct: 241 SFEYEDFELTDYHPWPHISAEVSV 264


>gi|329961539|ref|ZP_08299620.1| thymidylate synthase [Bacteroides fluxus YIT 12057]
 gi|328531751|gb|EGF58580.1| thymidylate synthase [Bacteroides fluxus YIT 12057]
          Length = 264

 Score =  365 bits (938), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 165/264 (62%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNMEEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLKGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NGKLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ  LQL+R PR LPQM INP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLTREPRALPQMQINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y PH  I  KV+V
Sbjct: 241 DFKFEDFELVNYNPHPHIAGKVAV 264


>gi|89100587|ref|ZP_01173446.1| thymidylate synthase [Bacillus sp. NRRL B-14911]
 gi|89084691|gb|EAR63833.1| thymidylate synthase [Bacillus sp. NRRL B-14911]
          Length = 264

 Score =  365 bits (938), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L RHV++ G+ + DRTG GT STFGYQMRFDL +GFPL+TTKK+H +S++HELL
Sbjct: 1   MEQYLQLCRHVLEKGTIKEDRTGTGTISTFGYQMRFDLKEGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW+EWAD++G LGP+YG QWRSW   DG  +DQIS ++ S++
Sbjct: 61  WFLNGDTNVKYLQDNGVRIWNEWADEEGNLGPVYGHQWRSWTGADGKTVDQISELISSIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IV+AWNV+ I  MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVNAWNVSEIGNMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + GEFIH+ GDVH+Y NH EQ +LQLSR P  LPQ+     + D+ 
Sbjct: 181 YALLTHMVAHVCDLEPGEFIHSFGDVHIYRNHLEQVNLQLSREPFKLPQLKFARKVEDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDF L  YE H  I   VSV
Sbjct: 241 SFKYEDFILEGYESHPHIKGVVSV 264


>gi|329957787|ref|ZP_08298262.1| thymidylate synthase [Bacteroides clarus YIT 12056]
 gi|328522664|gb|EGF49773.1| thymidylate synthase [Bacteroides clarus YIT 12056]
          Length = 264

 Score =  365 bits (938), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQLSR PRTLPQM INP++  + 
Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPRTLPQMRINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YEDF L +Y+PH  I  KV+V
Sbjct: 241 DFTYEDFELVNYDPHPHIAGKVAV 264


>gi|212693595|ref|ZP_03301723.1| hypothetical protein BACDOR_03112 [Bacteroides dorei DSM 17855]
 gi|237708754|ref|ZP_04539235.1| thymidylate synthase [Bacteroides sp. 9_1_42FAA]
 gi|237724195|ref|ZP_04554676.1| thymidylate synthase [Bacteroides sp. D4]
 gi|265755979|ref|ZP_06090446.1| thymidylate synthase [Bacteroides sp. 3_1_33FAA]
 gi|212663848|gb|EEB24422.1| hypothetical protein BACDOR_03112 [Bacteroides dorei DSM 17855]
 gi|229437383|gb|EEO47460.1| thymidylate synthase [Bacteroides dorei 5_1_36/D4]
 gi|229457180|gb|EEO62901.1| thymidylate synthase [Bacteroides sp. 9_1_42FAA]
 gi|263234057|gb|EEZ19658.1| thymidylate synthase [Bacteroides sp. 3_1_33FAA]
          Length = 264

 Score =  365 bits (938), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRILTEGVHKEDRTGTGTISIFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD +G+LG IYG QWRSWPDY+G  IDQIS  +++++
Sbjct: 61  WFLQGDTNIKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV NG+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+F+HTLGD H+Y NH EQ  LQLSR PR LPQM INP+I D+ 
Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDF L +Y+P   I  KVSV
Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264


>gi|288802399|ref|ZP_06407838.1| thymidylate synthase [Prevotella melaninogenica D18]
 gi|288334927|gb|EFC73363.1| thymidylate synthase [Prevotella melaninogenica D18]
          Length = 264

 Score =  365 bits (937), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  ++  G+ + DRT  GT S FG+QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLNLLNRILTEGTQKGDRTRTGTLSIFGHQMRFDLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL  HGV IW+EWAD++GELGP+YG QWRSWPDY G  IDQI ++V+ ++
Sbjct: 61  WFLRGDTNVRYLQEHGVRIWNEWADENGELGPVYGHQWRSWPDYKGGTIDQIKNVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR +V+AWN A ++ MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HDPDSRRMLVTAWNPAEVEDMALPPCHCLFQFYVADGRLSLQLYQRSADSFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLLQMIAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+P   I   V+V
Sbjct: 241 DFKYEDFELIGYDPLPHIPGVVAV 264


>gi|120434655|ref|YP_956876.1| thymidylate synthase [Gramella forsetii KT0803]
 gi|166231704|sp|A0LY29|TYSY_GRAFK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|117576805|emb|CAL65274.1| thymidylate synthase [Gramella forsetii KT0803]
          Length = 274

 Score =  365 bits (936), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 165/277 (59%), Positives = 212/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLLKHVLEQGAQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD +G+LGP+YG QWR+W   +G  IDQI  IV SL+
Sbjct: 61  WFLKGDTNIEYLKENGVRIWNEWADDNGDLGPVYGHQWRNW---NGEEIDQIKEIVHSLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 HNPNSRRMLVSAWNPSVLPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQVELQLSREPRQL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP + D+  F++EDFTL  Y+PH  I AKV++
Sbjct: 238 PIMKINPEVKDIFDFKFEDFTLEDYDPHPGIKAKVAI 274


>gi|226946823|ref|YP_002801896.1| thymidylate synthase [Azotobacter vinelandii DJ]
 gi|259550764|sp|C1DK16|TYSY_AZOVD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226721750|gb|ACO80921.1| Thymidylate synthase protein [Azotobacter vinelandii DJ]
          Length = 264

 Score =  365 bits (936), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V + G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK H KS+VHELL
Sbjct: 1   MKQYLDLMRLVREHGTFKSDRTGTGTFSVFGHQMRFDLAEGFPLVTTKKCHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+++V  +R
Sbjct: 61  WFLKGDTNIRYLKENGVSIWDEWADGNGDLGPVYGYQWRSWPAPDGRHIDQIANVVNMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+M LPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 DNPDSRRLIVSAWNPALIDEMKLPPCHALFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL +M+A V G   GEF+ T GD HLY NH EQADLQLSR P  LP M ++P++ DL 
Sbjct: 181 YALLILMMAQVTGLAPGEFVWTGGDCHLYANHLEQADLQLSREPLPLPTMQLDPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  Y+ H  I A V++
Sbjct: 241 AFRFEDFELVGYQSHPHIKAPVAI 264


>gi|294778259|ref|ZP_06743685.1| thymidylate synthase [Bacteroides vulgatus PC510]
 gi|294447887|gb|EFG16461.1| thymidylate synthase [Bacteroides vulgatus PC510]
          Length = 264

 Score =  365 bits (936), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRILTEGVHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD +G+LG IYG QWRSWPDY+G  IDQIS  +++++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV NG+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+F+HTLGD H+Y NH EQ  LQLSR PR LPQM INP+I ++ 
Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDF L +Y+P   I  KVSV
Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264


>gi|297583464|ref|YP_003699244.1| thymidylate synthase [Bacillus selenitireducens MLS10]
 gi|297141921|gb|ADH98678.1| thymidylate synthase [Bacillus selenitireducens MLS10]
          Length = 264

 Score =  364 bits (935), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L RHV++ G+ + DRTG GT STFGYQMRFDL  GFP+LTTKK+  ++++HELL
Sbjct: 1   MENYLNLCRHVLEHGTAKDDRTGTGTISTFGYQMRFDLQDGFPVLTTKKMALRAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++G++N+ YL  H V IWDEWAD++G+LGP+YG QWRSWP  DG  IDQ+  ++++++
Sbjct: 61  WFIKGETNIRYLKEHNVRIWDEWADENGDLGPVYGRQWRSWPTPDGRTIDQLREVIEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRH+++AWNV  +D+MAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPDSRRHVINAWNVGELDQMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLTMM+A   G + GEFIHT GDVH+Y NH EQ  LQL+R+P   P+M +NP+   + 
Sbjct: 181 YSLLTMMVAQECGLEPGEFIHTFGDVHIYQNHLEQVRLQLTRTPGQKPEMRLNPDKKRIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F  EDF L  Y+PH AI  +VSV
Sbjct: 241 DFTIEDFELIGYDPHPAIKGEVSV 264


>gi|294788691|ref|ZP_06753933.1| thymidylate synthase [Simonsiella muelleri ATCC 29453]
 gi|294483568|gb|EFG31253.1| thymidylate synthase [Simonsiella muelleri ATCC 29453]
          Length = 264

 Score =  364 bits (935), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 173/264 (65%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L+++V++ G+D+ DRTG GTRS FGYQMRFDL+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MQTYLNLIQYVLEHGTDKSDRTGTGTRSVFGYQMRFDLANGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  + VSIWDEWAD++G+LG +YG QWRSW   +G  IDQIS I+Q ++
Sbjct: 61  WFLKGETNIKYLKDNNVSIWDEWADENGDLGRVYGAQWRSWQTPNGKSIDQISQIIQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QNPDSRRLIVSAWNPAEVDNMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   Q GEFIHTLGD H+YNNHFEQA LQL+R PR LP++ IN  I DL 
Sbjct: 181 YALLTMMMAQVCKLQAGEFIHTLGDAHIYNNHFEQAKLQLTREPRRLPEIKINDKIKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y PH  I A+VSV
Sbjct: 241 EFKYEDFELINYNPHPHIKAEVSV 264


>gi|304309792|ref|YP_003809390.1| Thymidylate synthase [gamma proteobacterium HdN1]
 gi|301795525|emb|CBL43723.1| Thymidylate synthase [gamma proteobacterium HdN1]
          Length = 277

 Score =  364 bits (934), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 171/277 (61%), Positives = 206/277 (74%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV   G  + DRTG GT S FGYQMRFDL+ GFPL+TTKKVH KS++HELL
Sbjct: 1   MKQYLDLLRHVRDHGVRKSDRTGTGTLSVFGYQMRFDLAAGFPLVTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ YL  HGVSIW+EWA + GELGP+YG QWRSW    G  +DQI+ ++  +R
Sbjct: 61  WFLRGETNIQYLTDHGVSIWNEWATESGELGPVYGKQWRSWDGPHGETVDQIAWLIDEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN AL+                ALPPCHCLFQFYV  GKLSCQLYQRS
Sbjct: 121 NNPDSRRMVVSAWNPALLPDTRVSPRQNAANGLQALPPCHCLFQFYVAEGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GDVFLG+PFNIASY+LLT+M+A V G Q GEF+H+ GDVHLY NH EQA+ QL+R+P  L
Sbjct: 181 GDVFLGVPFNIASYALLTLMVAQVTGLQPGEFVHSFGDVHLYLNHLEQAETQLARAPLAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP I ++  FRY+DFTL  Y P+  I A V+V
Sbjct: 241 PKMQLNPAITNVFDFRYDDFTLTDYAPYDPIRAPVAV 277


>gi|260063783|ref|YP_003196863.1| thymidylate synthase [Robiginitalea biformata HTCC2501]
 gi|88783228|gb|EAR14401.1| thymidylate synthase [Robiginitalea biformata HTCC2501]
          Length = 274

 Score =  364 bits (934), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 168/277 (60%), Positives = 212/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLRHV+K G ++ DRTG GT S FGYQMRFDLS+GFPL+TTKK+H KSV+HELL
Sbjct: 1   MKQYHDLLRHVLKEGLEKTDRTGTGTVSVFGYQMRFDLSEGFPLVTTKKIHVKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  +GV IW+EWAD++G+LGP+YG QWR+W   +   +DQI+ +V+++R
Sbjct: 61  WFLRGDTNIAYLKENGVRIWNEWADENGDLGPVYGHQWRNW---NSEGLDQIAQVVETIR 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +V+AWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPDSRRMLVAAWNPSVLPDTSRTFAENVADGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLT+M+A V   Q GEFIHT GD H+YNNH EQ  LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALLTLMVAQVCNLQPGEFIHTFGDAHIYNNHREQIRLQLSREPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +FRYEDFTL +Y+PH  I  +V+V
Sbjct: 238 PTMELNPEVTDLFAFRYEDFTLHNYDPHPLIRGRVAV 274


>gi|255691312|ref|ZP_05414987.1| thymidylate synthase [Bacteroides finegoldii DSM 17565]
 gi|260622954|gb|EEX45825.1| thymidylate synthase [Bacteroides finegoldii DSM 17565]
          Length = 264

 Score =  364 bits (934), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 165/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLEDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD +G+LG IYG QWRSWPDY+G  IDQIS  V++++
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISETVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ  LQL+R PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLTREPRPLPQMNINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264


>gi|205373119|ref|ZP_03225923.1| thymidylate synthase [Bacillus coahuilensis m4-4]
          Length = 264

 Score =  363 bits (933), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L   ++K G  + DRTG GT STFGYQMR++L  GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLHLCEEILKNGVKKEDRTGTGTISTFGYQMRYNLQDGFPLVTTKKLHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD++GELGP+YG QWRSW   +G  IDQIS ++  ++
Sbjct: 61  WFLKGDTNIKYLQDNGVRIWNEWADENGELGPVYGHQWRSWTGSNGETIDQISQLIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ MALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QNPNSRRLIVSAWNVADVNHMALPPCHCLFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   + G+FIHTLGD H+Y+NH EQ +LQL+R  + LP+M +NP I D+ 
Sbjct: 181 YALLTLMIAQVCDLEPGDFIHTLGDAHIYSNHVEQVELQLTREVKDLPKMKLNPEIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF+L  Y+PH  I   VSV
Sbjct: 241 NFTFEDFSLEGYDPHPHIKGIVSV 264


>gi|282879252|ref|ZP_06288002.1| thymidylate synthase [Prevotella buccalis ATCC 35310]
 gi|281298645|gb|EFA91064.1| thymidylate synthase [Prevotella buccalis ATCC 35310]
          Length = 264

 Score =  363 bits (933), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +++ G  + DRTG GT+S FG+QMRF+L  GFP+LTTKK+H KS+++ELL
Sbjct: 1   MQQYLDLLHRILEEGKVKTDRTGTGTKSIFGHQMRFNLEDGFPVLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGVSIW+EWAD++G+LGP+YG QWRSWPD+ G  IDQI +++  ++
Sbjct: 61  WFLKGDTNVKYLQEHGVSIWNEWADENGDLGPVYGHQWRSWPDHRGGTIDQIQNVIDLIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +V+AWN A I +MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HHPDSRRMLVTAWNPADISEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHT GD HLY NH EQA LQL+R+PR LPQM +NP++  L 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTTGDTHLYLNHIEQAKLQLTRTPRELPQMKLNPDVKSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L +Y P   I A+V+V
Sbjct: 241 DFRYEDFELLNYNPWPHIKAEVAV 264


>gi|154491774|ref|ZP_02031400.1| hypothetical protein PARMER_01390 [Parabacteroides merdae ATCC
           43184]
 gi|154088015|gb|EDN87060.1| hypothetical protein PARMER_01390 [Parabacteroides merdae ATCC
           43184]
          Length = 264

 Score =  363 bits (933), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V++ G  + DRTG GT S FG+QMRF+L  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLELLDRVLREGVKKEDRTGTGTYSVFGHQMRFNLEDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N  YL  HGV IW+EWAD DG LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLQGDTNAKYLQEHGVRIWNEWADPDGNLGHIYGFQWRSWPDYKGGNIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D M LPPCH  FQFYV NG+LS Q+YQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQMYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHLEQVKLQLTRDPRPLPRMEINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+PH  I  +V+V
Sbjct: 241 GFQYEDFNLTGYDPHPHIKGEVAV 264


>gi|317130117|ref|YP_004096399.1| thymidylate synthase [Bacillus cellulosilyticus DSM 2522]
 gi|315475065|gb|ADU31668.1| thymidylate synthase [Bacillus cellulosilyticus DSM 2522]
          Length = 264

 Score =  363 bits (932), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 157/264 (59%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL +H+++ G+++ DRTG GT STFGYQMRF+L+ GFP+LTTKK+  ++++HELL
Sbjct: 1   MRQYHDLCKHILENGTEKTDRTGTGTISTFGYQMRFNLNDGFPVLTTKKLALRAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  + V IW+EWAD++G+LGP+YG QWRSWP   G  IDQ+ ++++ ++
Sbjct: 61  WFIKGDTNIRYLQENNVRIWNEWADENGDLGPVYGKQWRSWPTPSGETIDQLGNVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWNVA +DKMAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPDSRRLVVNAWNVADLDKMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G  YG+F+HT GDVH+Y NH EQ +LQL+R PR LP M +NP +  + 
Sbjct: 181 YALLTMMIARECGLDYGDFVHTFGDVHIYKNHIEQVNLQLTRDPRPLPTMKLNPEVKRIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+ EDF L  Y+PH  I  +VSV
Sbjct: 241 DFKIEDFELVGYDPHPHIKGEVSV 264


>gi|311068693|ref|YP_003973616.1| thymidylate synthase [Bacillus atrophaeus 1942]
 gi|310869210|gb|ADP32685.1| thymidylate synthase [Bacillus atrophaeus 1942]
          Length = 264

 Score =  363 bits (932), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 165/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLENGEIKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQI+ +V  ++
Sbjct: 61  WFLKGETNVKYLQDNGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQITRLVHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGEIDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ ++QL+R  R LP++     +  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHTEQVNMQLTRDVRPLPKLRFAREVDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF +  Y+PH  I   VSV
Sbjct: 241 DFTFDDFIVEDYDPHPHIKGAVSV 264


>gi|317475464|ref|ZP_07934728.1| thymidylate synthase [Bacteroides eggerthii 1_2_48FAA]
 gi|316908492|gb|EFV30182.1| thymidylate synthase [Bacteroides eggerthii 1_2_48FAA]
          Length = 264

 Score =  363 bits (932), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  +++++
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQLSR P+ LPQM INP++ ++ 
Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPKALPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I  KV+V
Sbjct: 241 DFKFEDFELINYDPHPHIAGKVAV 264


>gi|149924822|ref|ZP_01913162.1| thymidylate synthase [Plesiocystis pacifica SIR-1]
 gi|149814302|gb|EDM73904.1| thymidylate synthase [Plesiocystis pacifica SIR-1]
          Length = 273

 Score =  363 bits (932), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 173/273 (63%), Positives = 209/273 (76%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL  V++ G+ + DRTG GT+S FG Q+RFDL++GFPL+TTKKVH +S++HELL
Sbjct: 1   MRAYLELLDRVLREGTTKTDRTGTGTKSLFGPQLRFDLAQGFPLVTTKKVHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY--DGNV-------IDQ 111
           WFLRG++N++YLH + VSIWDEWAD DGELGPIYG QWRSWP++  DG+        IDQ
Sbjct: 61  WFLRGETNLAYLHENKVSIWDEWADNDGELGPIYGEQWRSWPNHRADGSADSSQPQTIDQ 120

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           +S +V  LR +P SRR ++SAWNVA +  MAL PCHCLFQFYV  GKLSCQLYQRS D+F
Sbjct: 121 MSWLVDELRRNPDSRRLVISAWNVADLPHMALAPCHCLFQFYVAEGKLSCQLYQRSADLF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V+G +YGEF+HT GD HLY NH EQA LQLSR PR LP M 
Sbjct: 181 LGVPFNIASYALLTMMIAKVVGLEYGEFVHTFGDAHLYLNHLEQAQLQLSREPRPLPTMH 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           I+     L  F YEDF L  YEPH  I A V+V
Sbjct: 241 IDRVPDSLFEFCYEDFRLEGYEPHPRIKAPVAV 273


>gi|218264414|ref|ZP_03478271.1| hypothetical protein PRABACTJOHN_03967 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222017|gb|EEC94667.1| hypothetical protein PRABACTJOHN_03967 [Parabacteroides johnsonii
           DSM 18315]
          Length = 264

 Score =  363 bits (932), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V++ G  + DRTG GT S FG+QMRF+L  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLELLDRVLREGVKKEDRTGTGTYSVFGHQMRFNLEDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N  YL +HGV IW+EWAD DG LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLQGDTNAKYLQKHGVRIWNEWADPDGNLGHIYGFQWRSWPDYKGGSIDQISEAVKTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS Q+YQRS D+FLG+PFNIAS
Sbjct: 121 QNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQMYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQL+R PR LP+M INP + D+ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHLEQVKLQLTRDPRPLPRMEINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+PH  I  +V+V
Sbjct: 241 GFQYEDFNLTGYDPHPHIKGEVAV 264


>gi|319903078|ref|YP_004162806.1| thymidylate synthase [Bacteroides helcogenes P 36-108]
 gi|319418109|gb|ADV45220.1| thymidylate synthase [Bacteroides helcogenes P 36-108]
          Length = 264

 Score =  363 bits (931), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRVLTEGAEKNDRTGTGTVSIFGHQMRFNMEEGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLKGDTNIKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ++ M LPPCH  FQFYV NGKLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLNNMNLPPCHAFFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL +M+A V G Q G+FIHTLGD H+Y NH EQ  LQL+R+P+ LP M INP++ ++ 
Sbjct: 181 YALLLLMMAQVTGLQAGDFIHTLGDAHIYLNHIEQVKLQLTRNPKPLPLMNINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y PH  I  KV++
Sbjct: 241 DFKYEDFELVNYNPHPHIAGKVAI 264


>gi|213962407|ref|ZP_03390670.1| thymidylate synthase [Capnocytophaga sputigena Capno]
 gi|213955073|gb|EEB66392.1| thymidylate synthase [Capnocytophaga sputigena Capno]
          Length = 274

 Score =  363 bits (931), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 171/277 (61%), Positives = 210/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLRH+++ G  + DRTG GT S FGYQMRFDLSKGFPL+TTKK+H KSV++ELL
Sbjct: 1   MKVYHDLLRHILENGYSKDDRTGTGTTSVFGYQMRFDLSKGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGV IW+EWAD++G+LGP+YG QWR+W   +G  IDQI  ++++L+
Sbjct: 61  WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRNW---NGEAIDQIKMVIETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 118 HNPESRRIIVSAWNPSVLPDTGKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLTMMLA V   Q G+F+HT GDVH+YNNH EQ  LQLSR PR L
Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQVGDFVHTFGDVHIYNNHREQVALQLSRIPREL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +F YEDF L  Y+P+ AI A+VSV
Sbjct: 238 PTMHLNPAVKDLFAFDYEDFRLEGYDPYPAIKAQVSV 274


>gi|167764750|ref|ZP_02436871.1| hypothetical protein BACSTE_03140 [Bacteroides stercoris ATCC
           43183]
 gi|167697419|gb|EDS13998.1| hypothetical protein BACSTE_03140 [Bacteroides stercoris ATCC
           43183]
          Length = 264

 Score =  363 bits (931), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQLSR PR L QM INP++ ++ 
Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPRALSQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y PH  I  KV+V
Sbjct: 241 DFKYEDFELVNYNPHPHIAGKVAV 264


>gi|283779094|ref|YP_003369849.1| thymidylate synthase [Pirellula staleyi DSM 6068]
 gi|283437547|gb|ADB15989.1| thymidylate synthase [Pirellula staleyi DSM 6068]
          Length = 264

 Score =  363 bits (931), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y  L++ ++  G+ + DRTG GT S FG+QMRFDLS+GFP +TTKK+H +S++HELL
Sbjct: 1   MEAYHQLMQRILDHGARKTDRTGTGTLSVFGHQMRFDLSQGFPAVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RG++N +YL  + VSIWDEWAD +G LGP+YG QWRSWP  DG  IDQ++ ++  ++
Sbjct: 61  WFIRGETNTAYLKENKVSIWDEWADSEGNLGPVYGRQWRSWPTPDGRQIDQLAEVIARIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +++MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RDPDSRRLIVSAWNVGELEQMALPPCHLLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G   G+F+HTLGD HLY+NH EQA LQLSR PR LP M INP + ++ 
Sbjct: 181 YALLTMMVAQVTGLALGDFVHTLGDAHLYSNHLEQAQLQLSREPRPLPTMQINPAVTEID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++DF L  Y+PH  I A V+V
Sbjct: 241 AFTFDDFKLVGYDPHPHIAAPVAV 264


>gi|227538336|ref|ZP_03968385.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241851|gb|EEI91866.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 273

 Score =  362 bits (930), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 165/273 (60%), Positives = 206/273 (75%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV   G  + DRTG GT+S FGYQMRF+L +GFPL+TTKK+H +S++HEL+
Sbjct: 1   MKQYLDLLKHVYTNGVTKTDRTGTGTKSVFGYQMRFNLKEGFPLVTTKKLHLRSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD+ G LGP+YG QWRSWP   G  IDQI+ +++ L+
Sbjct: 61  WFLKGETNIQYLKENGVSIWDEWADEQGNLGPVYGSQWRSWPTPAGEHIDQIAQVIKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG---------KLSCQLYQRSGDVF 171
             P SRR IVSAWNVA I+ MALPPCH  FQFYV            +LSCQLYQRS D+F
Sbjct: 121 NTPDSRRIIVSAWNVAEIEHMALPPCHAFFQFYVAPAQPEAGIMKPQLSCQLYQRSADIF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V   +  EFIHTLGD H+Y+NHFEQ +LQLSR P+ LP+MI
Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEAAEFIHTLGDAHIYSNHFEQTELQLSRDPKPLPKMI 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           INP++ D+  F++ DF L  YE H  I A V+V
Sbjct: 241 INPDVRDIFDFKFGDFELVDYESHPHIKAPVAV 273


>gi|333029205|ref|ZP_08457266.1| Thymidylate synthase [Bacteroides coprosuis DSM 18011]
 gi|332739802|gb|EGJ70284.1| Thymidylate synthase [Bacteroides coprosuis DSM 18011]
          Length = 264

 Score =  362 bits (930), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ V   G+ + DRTG GT S FG+QMRF+++ GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLQRVKSEGAKKEDRTGTGTISVFGHQMRFNMADGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  HGV IW+EWAD +G LGPIYG QWRSWP Y+G   DQI   ++ ++
Sbjct: 61  WFLNGDTNVTYLQDHGVRIWNEWADSNGNLGPIYGYQWRSWPGYNGETFDQIKEAIRMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWNV  I +M LPPCH LFQFYV NGKLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 ETPDSRRILVSAWNVGCISEMKLPPCHILFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHTLGD H+YNNH EQ DLQL+R PR LP+M INP + ++ 
Sbjct: 181 YALLLQMVAQVTGLEAGEFIHTLGDAHIYNNHLEQVDLQLTREPRKLPKMHINPRVKEID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y P+  I  KVSV
Sbjct: 241 QFKFEDFELTDYNPYPHIPGKVSV 264


>gi|257092198|ref|YP_003165839.1| Thymidylate synthase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257044722|gb|ACV33910.1| Thymidylate synthase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 273

 Score =  362 bits (930), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 164/273 (60%), Positives = 209/273 (76%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HV++ G  + DRTG GTRS FG+QMRFDL+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MQQYLDLMHHVLEHGVSKADRTGTGTRSVFGWQMRFDLAAGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL  +GV IWDEWAD++G+LGP+YG QWR W   DG  IDQI+ +V +L+
Sbjct: 61  WFLRGDTNVRYLQENGVRIWDEWADENGDLGPVYGRQWRHWQAADGREIDQIAQLVDNLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG---------KLSCQLYQRSGDVF 171
            +P SRRH+++AWN   +++MALPPCH L QFYV            +LSCQLYQRS D+F
Sbjct: 121 KNPDSRRHLLTAWNPGDVERMALPPCHALCQFYVAPASASATDRRPQLSCQLYQRSADIF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V  ++ G+F+HT GD HLY NHF+QA LQL+R+ R LP M 
Sbjct: 181 LGVPFNIASYALLTMMVAQVCNYRPGDFVHTFGDAHLYGNHFDQARLQLTRATRALPTMR 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +NP + DL +FR+EDFTL  Y+PH  I A V+V
Sbjct: 241 LNPEVDDLFAFRFEDFTLEGYDPHPHIAAAVAV 273


>gi|325286854|ref|YP_004262644.1| Thymidylate synthase [Cellulophaga lytica DSM 7489]
 gi|324322308|gb|ADY29773.1| Thymidylate synthase [Cellulophaga lytica DSM 7489]
          Length = 274

 Score =  362 bits (929), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 161/277 (58%), Positives = 212/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+HV + G+ + DRTG GT S FGYQMRFDLSKGFP++TTKK+H KS++HELL
Sbjct: 1   MKQYHDLLKHVQETGNQKGDRTGTGTISVFGYQMRFDLSKGFPMVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV IW+EWAD++G+LGP+YG QWR+W   D   IDQI  ++++L+
Sbjct: 61  WFLKGDTNIAYLQENGVRIWNEWADENGDLGPVYGHQWRNWNSED---IDQIKEVIETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +V+AWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLVTAWNPSVLPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ G+FIHT GD H+YNNH EQ +LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGDFIHTFGDAHIYNNHLEQVELQLSREPRAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+MIINP++ ++  F ++DFTL  Y+PH  I  KV++
Sbjct: 238 PKMIINPDVKNIFDFTFDDFTLEGYDPHPHIKGKVAI 274


>gi|56477943|ref|YP_159532.1| thymidylate synthase [Aromatoleum aromaticum EbN1]
 gi|62901201|sp|Q5P233|TYSY_AZOSE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|56313986|emb|CAI08631.1| Thymidylate synthase [Aromatoleum aromaticum EbN1]
          Length = 264

 Score =  362 bits (929), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV+  G  + DRTG GT S FG+QMRF+L  GFPLLTTKK+H +S++HELL
Sbjct: 1   MKQYLDLMRHVLDHGDRKSDRTGTGTLSIFGWQMRFNLDDGFPLLTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL+ +GVSIWD+WAD++G+LGP+YG QWR W   +G  IDQI+ ++  L+
Sbjct: 61  WFLRGDTNIRYLNENGVSIWDDWADENGDLGPVYGKQWRRWETANGATIDQIAQLIDGLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRH+VSAWN   +  MALPPCH LFQFYV   +LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRHLVSAWNPGEVAGMALPPCHALFQFYVAGDRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+ T GD HLY NH +QA LQLSR PR LP+MI+NP + D+ 
Sbjct: 181 YALLTLMVAQVCGLRAGDFVWTGGDCHLYLNHLDQARLQLSRQPRALPRMIVNPGVTDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L  Y+PH  I A+V+V
Sbjct: 241 GFRFEDFRLEGYDPHPHIKAEVAV 264


>gi|301166943|emb|CBW26522.1| putative thymidylate synthase [Bacteriovorax marinus SJ]
          Length = 257

 Score =  362 bits (929), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 160/257 (62%), Positives = 203/257 (78%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           ++HV+  G ++ DRTG GT S FGYQ R+DLS+GFPL+TTKK H +S++HELLWFL+GD+
Sbjct: 1   MKHVLDNGVEKSDRTGTGTISCFGYQARYDLSEGFPLVTTKKCHLRSIIHELLWFLKGDT 60

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N++YL  + V+IWDEWAD+DG LGP+YG QWR W   DG+ +DQIS++V+ ++ +P SRR
Sbjct: 61  NINYLKENKVTIWDEWADEDGNLGPVYGAQWRKWQRPDGSHVDQISNLVEQIKNNPDSRR 120

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            IVSAWN  +ID+MALPPCH  FQF+V N KLSCQLYQRS D+FLG+PFNIASY+LLTMM
Sbjct: 121 LIVSAWNPGVIDQMALPPCHAFFQFFVANDKLSCQLYQRSADIFLGVPFNIASYALLTMM 180

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A V G + GEFIHTLGD HLY+NH +QA LQLSR PR LPQM INP + ++  F + DF
Sbjct: 181 MAQVTGLEAGEFIHTLGDAHLYSNHLDQAKLQLSRDPRPLPQMKINPEVKNIFEFNFSDF 240

Query: 248 TLRSYEPHAAILAKVSV 264
            L  Y+PH  I A V+V
Sbjct: 241 ELVGYDPHPHIKAPVAV 257


>gi|113971196|ref|YP_734989.1| thymidylate synthase [Shewanella sp. MR-4]
 gi|114048434|ref|YP_738984.1| thymidylate synthase [Shewanella sp. MR-7]
 gi|122944477|sp|Q0HSH8|TYSY_SHESR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123029436|sp|Q0HG85|TYSY_SHESM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|113885880|gb|ABI39932.1| thymidylate synthase [Shewanella sp. MR-4]
 gi|113889876|gb|ABI43927.1| thymidylate synthase [Shewanella sp. MR-7]
          Length = 264

 Score =  362 bits (929), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL
Sbjct: 1   MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + VSIWDEWAD++G+LGP+YG QWRSWP   G+ IDQI+ ++  ++
Sbjct: 61  WFLKGDTNIAYLRDNKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQIAQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPTMTILRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF L +Y+PH  I A V+V
Sbjct: 241 DYQFEDFELTNYDPHPHIKAPVAV 264


>gi|300774218|ref|ZP_07084085.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300758897|gb|EFK55726.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 273

 Score =  362 bits (929), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 165/273 (60%), Positives = 206/273 (75%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV   G  + DRTG GT+S FGYQMRF+L +GFPL+TTKK+H +S++HEL+
Sbjct: 1   MKQYLDLLKHVYTNGVTKTDRTGTGTKSVFGYQMRFNLKEGFPLVTTKKLHLRSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD+ G LGP+YG QWRSWP   G  IDQI+ +++ L+
Sbjct: 61  WFLKGETNIQYLKENGVSIWDEWADEQGNLGPVYGSQWRSWPTPAGEHIDQIAQVIKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG---------KLSCQLYQRSGDVF 171
             P SRR IVSAWNVA I+ MALPPCH  FQFYV            +LSCQLYQRS D+F
Sbjct: 121 NTPDSRRIIVSAWNVAEIEHMALPPCHAFFQFYVAPAQPEAGILKPQLSCQLYQRSADIF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V   +  EFIHTLGD H+Y+NHFEQ +LQLSR P+ LP+MI
Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEPAEFIHTLGDAHIYSNHFEQTELQLSRDPKPLPKMI 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           INP++ D+  F++ DF L  YE H  I A V+V
Sbjct: 241 INPDVRDIFDFKFGDFELVDYESHPHIKAPVAV 273


>gi|117921478|ref|YP_870670.1| thymidylate synthase [Shewanella sp. ANA-3]
 gi|166231734|sp|A0KZP5|TYSY_SHESA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|117613810|gb|ABK49264.1| thymidylate synthase [Shewanella sp. ANA-3]
          Length = 264

 Score =  362 bits (928), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL
Sbjct: 1   MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + VSIWDEWAD++G+LGP+YG QWRSWP   G+ IDQI+ ++  ++
Sbjct: 61  WFLKGDTNIAYLRENKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQIAQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRQLPTMTILRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF L  Y+PH  I A V+V
Sbjct: 241 DYQFEDFELTHYDPHPHIKAPVAV 264


>gi|113868661|ref|YP_727150.1| thymidylate synthase [Ralstonia eutropha H16]
 gi|113527437|emb|CAJ93782.1| thymidylate synthase [Ralstonia eutropha H16]
          Length = 282

 Score =  362 bits (928), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL  GFP++TTKK+H KS+++ELL
Sbjct: 19  MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLRAGFPVVTTKKLHLKSIIYELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  HGV+IWDEWAD++GELGP+YG QWRSWP  DG  IDQI+ +V  +R
Sbjct: 79  WFLQGSTNVRWLQEHGVTIWDEWADENGELGPVYGSQWRSWPTPDGRHIDQITDLVAQIR 138

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWNVA I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 139 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 198

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + G+F+ T GD HLYNNHFEQ   QL+R P  LPQ+ I      + 
Sbjct: 199 YALLTHMMAQQTGLEVGDFVWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRKPDSIF 258

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF L  Y+ HAAI A V+V
Sbjct: 259 DYRYEDFELAGYQSHAAIKAPVAV 282


>gi|237713988|ref|ZP_04544469.1| thymidylate synthase [Bacteroides sp. D1]
 gi|262407040|ref|ZP_06083589.1| thymidylate synthase [Bacteroides sp. 2_1_22]
 gi|294809774|ref|ZP_06768458.1| thymidylate synthase [Bacteroides xylanisolvens SD CC 1b]
 gi|298479700|ref|ZP_06997900.1| thymidylate synthase [Bacteroides sp. D22]
 gi|229445812|gb|EEO51603.1| thymidylate synthase [Bacteroides sp. D1]
 gi|262355743|gb|EEZ04834.1| thymidylate synthase [Bacteroides sp. 2_1_22]
 gi|294443014|gb|EFG11797.1| thymidylate synthase [Bacteroides xylanisolvens SD CC 1b]
 gi|295084876|emb|CBK66399.1| thymidylate synthase [Bacteroides xylanisolvens XB1A]
 gi|298274090|gb|EFI15651.1| thymidylate synthase [Bacteroides sp. D22]
          Length = 264

 Score =  362 bits (928), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISIFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG +YG QWRSWPDY+G  IDQIS +V++L+
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV +G+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HT GD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264


>gi|172044615|sp|Q0K889|TYSY_RALEH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 264

 Score =  362 bits (928), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL  GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLRAGFPVVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  HGV+IWDEWAD++GELGP+YG QWRSWP  DG  IDQI+ +V  +R
Sbjct: 61  WFLQGSTNVRWLQEHGVTIWDEWADENGELGPVYGSQWRSWPTPDGRHIDQITDLVAQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWNVA I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + G+F+ T GD HLYNNHFEQ   QL+R P  LPQ+ I      + 
Sbjct: 181 YALLTHMMAQQTGLEVGDFVWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF L  Y+ HAAI A V+V
Sbjct: 241 DYRYEDFELAGYQSHAAIKAPVAV 264


>gi|82411148|gb|ABB75257.1| thymidylate synthase [Nitrosospira multiformis ATCC 25196]
          Length = 285

 Score =  361 bits (927), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G  + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H KS+++ELL
Sbjct: 22  MRQYLDLMQHVLEHGQKKSDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKLHLKSIIYELL 81

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ + VSIWDEWAD++G+LGPIYG QWRSWP+  G  IDQI  +V+ +R
Sbjct: 82  WFLKGDTNIRYLNENDVSIWDEWADENGDLGPIYGRQWRSWPNGKGGHIDQIEQVVEQIR 141

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VS+WNV  + +M L PCH LFQFYV   KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 142 NTPDSRRMLVSSWNVGELQEMKLAPCHALFQFYVAEDKLSCQLYQRSADIFLGVPFNIAS 201

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+MLA     + GEF+HT GD HLY NH EQA  QL R P+ LP M +NP I ++ 
Sbjct: 202 YALLTLMLAQSCDLRAGEFVHTFGDAHLYLNHLEQAREQLERGPKKLPIMKLNPAIRNVF 261

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH +I A ++V
Sbjct: 262 DFRYEDFNLEGYDPHPSIKAPIAV 285


>gi|256425405|ref|YP_003126058.1| thymidylate synthase [Chitinophaga pinensis DSM 2588]
 gi|256040313|gb|ACU63857.1| thymidylate synthase [Chitinophaga pinensis DSM 2588]
          Length = 264

 Score =  361 bits (927), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL+H+I  GS + DRTG GT S FG Q+RF+L +GFP++TTKKVH KS+++ELL
Sbjct: 1   MEQYLKLLQHIIDQGSVKTDRTGTGTTSCFGAQLRFNLQEGFPMVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  HGVSIWDEWAD++G+LGP+YG QWRSW   DG VIDQI+  V++++
Sbjct: 61  WFLNGDTNIKYLKDHGVSIWDEWADENGDLGPVYGKQWRSWETKDGKVIDQITEAVKTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNV  +  MAL PCHCLFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPDSRRIIVNAWNVGDLPDMALSPCHCLFQFYVAEGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y++LTMM+A V   + G+F+HT GDVHLY+NH EQA LQLSR P  LP + INP + D+ 
Sbjct: 181 YAILTMMMAQVCDLEPGDFVHTFGDVHLYSNHMEQAKLQLSRQPFELPVLKINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+ H  I A V++
Sbjct: 241 GFKFEDFELLNYQHHPHIKAPVAI 264


>gi|323143173|ref|ZP_08077870.1| thymidylate synthase [Succinatimonas hippei YIT 12066]
 gi|322417060|gb|EFY07697.1| thymidylate synthase [Succinatimonas hippei YIT 12066]
          Length = 264

 Score =  361 bits (927), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 170/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+R +++ G DR DRTG GTRS FG QMRFDL+KGFPLLTTKKVH +S++HELL
Sbjct: 1   MKIYLDLMRRILEEGVDRSDRTGTGTRSIFGTQMRFDLNKGFPLLTTKKVHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSW   DG VIDQIS+ V  ++
Sbjct: 61  WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGKQWRSWAAPDGKVIDQISNAVDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++KMALPPCH LFQFYV NGKLSC LYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNPADVEKMALPPCHALFQFYVANGKLSCLLYQRSCDFFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLTMM+A       G+F+ T GD HLY+NHFEQA LQLSR+PR LP M+I      + 
Sbjct: 181 YSLLTMMMAKECDLGLGDFVWTGGDTHLYSNHFEQAHLQLSRTPRALPTMLIKRKAPSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF L +Y+P+  I A V+V
Sbjct: 241 DYKYEDFELINYDPYPVIKAPVAV 264


>gi|119774004|ref|YP_926744.1| thymidylate synthase [Shewanella amazonensis SB2B]
 gi|166231729|sp|A1S3W8|TYSY_SHEAM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119766504|gb|ABL99074.1| thymidylate synthase [Shewanella amazonensis SB2B]
          Length = 264

 Score =  361 bits (927), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 165/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G+D+ DRTG GTRS FGYQMRFDL++GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKHILDKGTDKSDRTGTGTRSVFGYQMRFDLNEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV YLH + VSIWDEWAD+ G LGP+YG QWRSWP  DG  IDQIS +++ ++
Sbjct: 61  WFLKGETNVDYLHENKVSIWDEWADEKGNLGPVYGAQWRSWPTPDGRHIDQISQVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 ATPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP M I  +   + 
Sbjct: 181 YALLTMMVAQQCNLGLGDFVWTGGDTHLYSNHMEQTQLQLSREPRPLPTMKILRHPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF L  Y+PH  I A V++
Sbjct: 241 DYRFEDFELSGYDPHPHIKAPVAI 264


>gi|162139863|ref|YP_412649.2| thymidylate synthase [Nitrosospira multiformis ATCC 25196]
          Length = 264

 Score =  361 bits (927), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G  + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H KS+++ELL
Sbjct: 1   MRQYLDLMQHVLEHGQKKSDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ + VSIWDEWAD++G+LGPIYG QWRSWP+  G  IDQI  +V+ +R
Sbjct: 61  WFLKGDTNIRYLNENDVSIWDEWADENGDLGPIYGRQWRSWPNGKGGHIDQIEQVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VS+WNV  + +M L PCH LFQFYV   KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NTPDSRRMLVSSWNVGELQEMKLAPCHALFQFYVAEDKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+MLA     + GEF+HT GD HLY NH EQA  QL R P+ LP M +NP I ++ 
Sbjct: 181 YALLTLMLAQSCDLRAGEFVHTFGDAHLYLNHLEQAREQLERGPKKLPIMKLNPAIRNVF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH +I A ++V
Sbjct: 241 DFRYEDFNLEGYDPHPSIKAPIAV 264


>gi|60682981|ref|YP_213125.1| thymidylate synthase [Bacteroides fragilis NCTC 9343]
 gi|81313963|sp|Q5L9L6|TYSY_BACFN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|60494415|emb|CAH09211.1| putative thymidylate synthase B [Bacteroides fragilis NCTC 9343]
 gi|301164446|emb|CBW24004.1| putative thymidylate synthase B [Bacteroides fragilis 638R]
          Length = 264

 Score =  361 bits (926), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD+ G+LG IYG QWRSWP YDG  IDQIS  V +++
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYDGGFIDQISEAVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I  KV+V
Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264


>gi|150024438|ref|YP_001295264.1| thymidylate synthase [Flavobacterium psychrophilum JIP02/86]
 gi|166231699|sp|A6GWH3|TYSY_FLAPJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|149770979|emb|CAL42446.1| Thymidylate synthase [Flavobacterium psychrophilum JIP02/86]
          Length = 274

 Score =  361 bits (926), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 158/277 (57%), Positives = 213/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+++V+  G+ + DRTG GT+S FGYQMRF+L++GFP++TTKK+H KS++HELL
Sbjct: 1   MKQYLDLVKYVLNNGTQKGDRTGTGTKSVFGYQMRFNLAEGFPMVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL ++GV IWD+WAD++GELGP+YG QWR+W + +   IDQI+ ++++L+
Sbjct: 61  WFLKGETNIAYLQQNGVKIWDDWADENGELGPVYGHQWRNWNNEE---IDQITELIETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K+ALPPCH  FQFYV  GKLSCQLYQRS
Sbjct: 118 INPNSRRMLVSAWNPSVLPDTTKSFAENVANAKVALPPCHAFFQFYVSEGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V   Q GEFIHT GD H+YNNHFEQ  LQLSR P+ L
Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCDLQAGEFIHTFGDAHIYNNHFEQVALQLSREPKPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+MI+NP + ++  F++EDF L  YE HA I   V+V
Sbjct: 238 PKMILNPAVKNIFDFKFEDFKLEGYESHAHIKGAVAV 274


>gi|24372913|ref|NP_716955.1| thymidylate synthase [Shewanella oneidensis MR-1]
 gi|32171834|sp|Q8EH94|TYSY_SHEON RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|24347042|gb|AAN54400.1|AE015577_10 thymidylate synthase [Shewanella oneidensis MR-1]
          Length = 264

 Score =  361 bits (926), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL
Sbjct: 1   MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + VSIWDEWAD++G+LGP+YG QWRSWP   G  IDQIS ++  ++
Sbjct: 61  WFLKGDTNIAYLRDNKVSIWDEWADENGDLGPVYGAQWRSWPTQSGEAIDQISQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPTMTILRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L +Y+PH  I A V+V
Sbjct: 241 DYQFDDFALSNYDPHPHIKAPVAV 264


>gi|218128749|ref|ZP_03457553.1| hypothetical protein BACEGG_00321 [Bacteroides eggerthii DSM 20697]
 gi|217988977|gb|EEC55293.1| hypothetical protein BACEGG_00321 [Bacteroides eggerthii DSM 20697]
          Length = 264

 Score =  361 bits (926), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  +++++
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH  Q  LQLSR P+ LPQM INP++ ++ 
Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLAQVKLQLSREPKALPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I  KV+V
Sbjct: 241 DFKFEDFELINYDPHPHIAGKVAV 264


>gi|188582027|ref|YP_001925472.1| thymidylate synthase [Methylobacterium populi BJ001]
 gi|179345525|gb|ACB80937.1| Thymidylate synthase [Methylobacterium populi BJ001]
          Length = 264

 Score =  361 bits (926), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDLS+GFPL+TTK++H +S+VHELL
Sbjct: 1   MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLSEGFPLVTTKQLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GV+IWDEWAD +G+LGP+YG QWRSW   DG  +DQI+ I+  + 
Sbjct: 61  WFLKGDTNVAYLRENGVTIWDEWADANGDLGPVYGRQWRSWAKPDGGTVDQIAWILDEIA 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV  G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVAEGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY NH +QA LQLSR+PR LP++ +NP +  L 
Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLDQARLQLSRAPRALPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  YEPH AI A V+V
Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264


>gi|254292830|ref|YP_003058853.1| thymidylate synthase [Hirschia baltica ATCC 49814]
 gi|254041361|gb|ACT58156.1| thymidylate synthase [Hirschia baltica ATCC 49814]
          Length = 264

 Score =  360 bits (925), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ V+  G +R DRTG GT+  FG QMRFDLS+ FP+LTTKK+H +S++ ELL
Sbjct: 1   MRQYLDLLQDVLDNGVERGDRTGTGTKGVFGRQMRFDLSETFPILTTKKLHLRSIIIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG VIDQIS ++  ++
Sbjct: 61  WFLKGDTNIKYLTDNKVSIWDEWADENGDLGPVYGKQWRSWAAPDGRVIDQISWVLNEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNPADVNDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G + GEF+H+ GD HLY NH EQA LQL+R  + LP M +NP+  DL 
Sbjct: 181 YALLTMMMARATGLEAGEFVHSFGDAHLYMNHIEQAKLQLTRDTKQLPIMTLNPDKTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDFTL  YE H  I A ++V
Sbjct: 241 GWDYEDFTLHGYEAHPTIKAPIAV 264


>gi|265766866|ref|ZP_06094695.1| thymidylate synthase [Bacteroides sp. 2_1_16]
 gi|263253243|gb|EEZ24719.1| thymidylate synthase [Bacteroides sp. 2_1_16]
          Length = 264

 Score =  360 bits (925), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD+ G+LG +YG QWRSWP YDG  IDQIS  V +++
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHVYGYQWRSWPTYDGGFIDQISEAVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I  KV+V
Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264


>gi|261855508|ref|YP_003262791.1| thymidylate synthase [Halothiobacillus neapolitanus c2]
 gi|261835977|gb|ACX95744.1| thymidylate synthase [Halothiobacillus neapolitanus c2]
          Length = 264

 Score =  360 bits (925), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ V++ G DR DRTG GTRS FGYQMRFDL  GFP LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLQKVMEQGVDRGDRTGTGTRSLFGYQMRFDLEAGFPALTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  +GV IWDEWAD +G LGP+YG QWRSW   DG  IDQ+S ++  ++
Sbjct: 61  WFIQGDTNIRYLQENGVRIWDEWADAEGNLGPVYGKQWRSWATPDGRTIDQLSQVIHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IV+AWN A +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TTPESRRLIVTAWNPADVPNMALPPCHLLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEF+HTLGD H+Y+NHFEQA  QL R+P  LP M INP    + 
Sbjct: 181 YALLTLMIAQVTGLKPGEFVHTLGDAHIYHNHFEQARTQLERTPGKLPTMKINPERRSIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF ++DF L  Y P   I A V+V
Sbjct: 241 SFVFDDFVLEDYAPLPHIAAPVAV 264


>gi|21241612|ref|NP_641194.1| thymidylate synthase [Xanthomonas axonopodis pv. citri str. 306]
 gi|25091469|sp|Q8PP46|TYSY_XANAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|21106971|gb|AAM35730.1| thymidylate synthase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 264

 Score =  360 bits (925), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+HV+  G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLELLQHVLDHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  H V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLSDHQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPSLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|237720128|ref|ZP_04550609.1| thymidylate synthase [Bacteroides sp. 2_2_4]
 gi|260174020|ref|ZP_05760432.1| thymidylate synthase [Bacteroides sp. D2]
 gi|293373111|ref|ZP_06619476.1| thymidylate synthase [Bacteroides ovatus SD CMC 3f]
 gi|299148006|ref|ZP_07041069.1| thymidylate synthase [Bacteroides sp. 3_1_23]
 gi|315922289|ref|ZP_07918529.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|229450680|gb|EEO56471.1| thymidylate synthase [Bacteroides sp. 2_2_4]
 gi|292631930|gb|EFF50543.1| thymidylate synthase [Bacteroides ovatus SD CMC 3f]
 gi|298514189|gb|EFI38075.1| thymidylate synthase [Bacteroides sp. 3_1_23]
 gi|313696164|gb|EFS32999.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 264

 Score =  360 bits (925), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG +YG QWRSWPDY+G  IDQIS +V++++
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV +G+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HT GD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264


>gi|189462550|ref|ZP_03011335.1| hypothetical protein BACCOP_03240 [Bacteroides coprocola DSM 17136]
 gi|189430711|gb|EDU99695.1| hypothetical protein BACCOP_03240 [Bacteroides coprocola DSM 17136]
          Length = 274

 Score =  360 bits (925), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +   G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 11  MKQYLDLLQRIRTEGVKKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY+G  IDQIS  V++++
Sbjct: 71  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYEGGFIDQISEAVETIK 130

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNVA +  M LPPCH  FQFYV NG+LS Q+YQRS D FLG+PFNIAS
Sbjct: 131 HNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVANGRLSLQMYQRSADSFLGVPFNIAS 190

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHT+GD H+Y NH EQ DLQL+RSPR LPQM++NP++ ++ 
Sbjct: 191 YALLLQMMAQVTGLKAGDFIHTIGDAHIYLNHQEQVDLQLTRSPRPLPQMLLNPDVKNIF 250

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y+P   I  KVSV
Sbjct: 251 DFKYEDFELVNYDPWPHIAGKVSV 274


>gi|29347457|ref|NP_810960.1| thymidylate synthase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253570671|ref|ZP_04848079.1| thymidylate synthase [Bacteroides sp. 1_1_6]
 gi|298385085|ref|ZP_06994644.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|62901371|sp|Q8A639|TYSY_BACTN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|29339357|gb|AAO77154.1| thymidylate synthase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251839620|gb|EES67703.1| thymidylate synthase [Bacteroides sp. 1_1_6]
 gi|298262229|gb|EFI05094.1| thymidylate synthase [Bacteroides sp. 1_1_14]
          Length = 264

 Score =  360 bits (925), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N  YL  HGV IW+EWAD++G+LG IYG QWRSWPDYDG  IDQIS  V++++
Sbjct: 61  WFLQGDTNAKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYDGGFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +  M LPPCH  FQFYV +G+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLKNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHTLGD H+Y NH +Q  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGEFIHTLGDAHIYLNHLDQVKLQLSREPRALPQMKINPDVKSIY 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFQFEDFELVNYDPHPHIAGIVAV 264


>gi|150010315|ref|YP_001305058.1| thymidylate synthase [Parabacteroides distasonis ATCC 8503]
 gi|256839166|ref|ZP_05544676.1| thymidylate synthase [Parabacteroides sp. D13]
 gi|262382399|ref|ZP_06075536.1| thymidylate synthase [Bacteroides sp. 2_1_33B]
 gi|298374712|ref|ZP_06984670.1| thymidylate synthase [Bacteroides sp. 3_1_19]
 gi|301308397|ref|ZP_07214351.1| thymidylate synthase [Bacteroides sp. 20_3]
 gi|166231722|sp|A6LIC2|TYSY_PARD8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|149938739|gb|ABR45436.1| thymidylate synthase [Parabacteroides distasonis ATCC 8503]
 gi|256740085|gb|EEU53409.1| thymidylate synthase [Parabacteroides sp. D13]
 gi|262295277|gb|EEY83208.1| thymidylate synthase [Bacteroides sp. 2_1_33B]
 gi|298269080|gb|EFI10735.1| thymidylate synthase [Bacteroides sp. 3_1_19]
 gi|300833867|gb|EFK64483.1| thymidylate synthase [Bacteroides sp. 20_3]
          Length = 264

 Score =  360 bits (925), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLELLNRVLTEGVRKEDRTGTGTISVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  HGV IW+EWAD DG LG IYG QWRSWPDY G  IDQI+  V++++
Sbjct: 61  WFLNGDTNVKYLQDHGVRIWNEWADADGSLGHIYGYQWRSWPDYKGGSIDQITEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G + G+F+HTLGD H+Y+NH EQ  LQL+R PR LP+M INP++  + 
Sbjct: 181 YALLLQMMAQATGLKAGDFVHTLGDAHIYSNHLEQVKLQLTREPRALPRMEINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y+PH  I  +V+V
Sbjct: 241 DFKFEDFNLTGYDPHPHIKGEVAV 264


>gi|189468577|ref|ZP_03017362.1| hypothetical protein BACINT_04980 [Bacteroides intestinalis DSM
           17393]
 gi|189436841|gb|EDV05826.1| hypothetical protein BACINT_04980 [Bacteroides intestinalis DSM
           17393]
          Length = 264

 Score =  360 bits (924), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G  + DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGIHKEDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  HGV IW+EWAD++GELG IYG QWRSWPDY G  IDQIS  V+++ 
Sbjct: 61  WFLNGDTNAKYLQDHGVRIWNEWADENGELGHIYGYQWRSWPDYKGGSIDQISEAVETIL 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A + G + G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQITGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y+PH  I  KVSV
Sbjct: 241 DFQYEDFELVNYDPHPHIAGKVSV 264


>gi|163793369|ref|ZP_02187344.1| thymidylate synthase [alpha proteobacterium BAL199]
 gi|159181171|gb|EDP65686.1| thymidylate synthase [alpha proteobacterium BAL199]
          Length = 264

 Score =  360 bits (924), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 168/264 (63%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HV+  G+ + DRTG GTRS FG+QMRFDLSKGFP++TTKK+H KS+VHELL
Sbjct: 1   MRQYLDLMTHVLTDGALKGDRTGTGTRSVFGHQMRFDLSKGFPMVTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL   GV IW+EWA  DG+LGP+YG QWRSW   DG+ +DQIS ++  LR
Sbjct: 61  WFLAGDTNVRYLQERGVRIWNEWARPDGDLGPVYGKQWRSWGSPDGSTVDQISVLLDQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPNSRRLIVSAWNVGELDDMALAPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G   GEF+HT GD HLY NH EQA  QL R P  LP++ +NPN+ DL 
Sbjct: 181 YALLTHMIAHVTGLGVGEFVHTFGDAHLYLNHLEQARRQLQREPLPLPRLWLNPNVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +ED  +  YE H  I A V+V
Sbjct: 241 EFTFEDVRIDGYEAHPHIAAPVAV 264


>gi|285019528|ref|YP_003377239.1| thymidylate synthase [Xanthomonas albilineans GPE PC73]
 gi|283474746|emb|CBA17245.1| probable thymidylate synthase protein [Xanthomonas albilineans]
          Length = 264

 Score =  360 bits (924), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LLRHV+  G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S+VHELL
Sbjct: 1   MTPYLELLRHVLTHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  + VSIWDEWAD  GELGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGETNIAYLKDNKVSIWDEWADAQGELGPVYGKQWRRWAGADGREIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVAELPQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHF QA  QL+R+PR LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFAQAREQLARTPRPLPRLRLNPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F Y+D  +  Y+PH AI A V+V
Sbjct: 241 AFTYDDIAIEGYDPHPAIKAPVAV 264


>gi|294626073|ref|ZP_06704681.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292599609|gb|EFF43738.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 264

 Score =  360 bits (924), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  +R
Sbjct: 61  WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWSGPDGVEIDQMQWLVDEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRAPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|119899486|ref|YP_934699.1| thymidylate synthase [Azoarcus sp. BH72]
 gi|166231687|sp|A1KAF7|TYSY_AZOSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119671899|emb|CAL95813.1| thymidylate synthase [Azoarcus sp. BH72]
          Length = 264

 Score =  360 bits (924), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV++ G  + DRTG GT S FG+QMRF L++GFPLLTTKK+H +S++HELL
Sbjct: 1   MQQYLDLMRHVLEHGDRKTDRTGTGTVSVFGWQMRFRLAEGFPLLTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RGD+N+ YL  HGVSIWDEWAD++G+LGP+YG QWR W   DG  +DQ++ ++  ++
Sbjct: 61  WFIRGDTNIRYLKDHGVSIWDEWADENGDLGPVYGKQWRRWETADGRSVDQLAQLIDGIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN   +  MALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRHIVSAWNPGEVGSMALPPCHALFQFYVAGGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+F+ T GD HLY NH +QA+ QL R+P  LP+MI+NP + DL 
Sbjct: 181 YALLTMMVAQVCDLEPGDFVWTGGDCHLYLNHLQQAEEQLQRTPYPLPRMILNPEVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDFTL  Y  H  I A V+V
Sbjct: 241 AFRFEDFTLEGYTAHPHIKAPVAV 264


>gi|194290285|ref|YP_002006192.1| thymidylate synthase [Cupriavidus taiwanensis LMG 19424]
 gi|193224120|emb|CAQ70129.1| thymidylate synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 283

 Score =  360 bits (924), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL +GFP++TTKK+H KS+++ELL
Sbjct: 20  MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLREGFPVVTTKKLHLKSIIYELL 79

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  HGV+IWDEWAD+ GELGP+YG QWRSWP  DG  IDQI+ +V  +R
Sbjct: 80  WFLQGSTNVRWLQEHGVTIWDEWADEHGELGPVYGSQWRSWPAPDGRHIDQITELVAQIR 139

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWNVA I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 140 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 199

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + G+FI T GD HLYNNHFEQ   QL+R P  LPQ+ I      + 
Sbjct: 200 YALLTHMMAQQTGLEVGDFIWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRRPDSIF 259

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF L  Y+ H AI A V+V
Sbjct: 260 DYRYEDFELAGYQSHPAIKAPVAV 283


>gi|217970012|ref|YP_002355246.1| thymidylate synthase [Thauera sp. MZ1T]
 gi|217507339|gb|ACK54350.1| thymidylate synthase [Thauera sp. MZ1T]
          Length = 264

 Score =  360 bits (923), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV++ G  + DRTG GT S FG+QMRF L  GFPLLTTKK+H +S++HELL
Sbjct: 1   MRQYLDLMRHVLEHGDPKTDRTGTGTLSVFGWQMRFRLQDGFPLLTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD DGELGP+YG QWR W   DG  +DQI+ +V+S+R
Sbjct: 61  WFLQGDTNIRYLRENGVSIWDEWADADGELGPVYGKQWRRWETADGRSVDQIARVVESIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRRH+VSAWN   +D MALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RTPDSRRHLVSAWNPGEVDAMALPPCHALFQFYVAGGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + G+F+ T GD HLY+NH  QA  QL R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQVCELEAGDFVWTGGDCHLYSNHLRQAREQLERAPRPLPTLRLNPAVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  L  Y+PH  I A V+V
Sbjct: 241 GFRFEDIALEGYDPHPHIKAPVAV 264


>gi|198276921|ref|ZP_03209452.1| hypothetical protein BACPLE_03126 [Bacteroides plebeius DSM 17135]
 gi|198270446|gb|EDY94716.1| hypothetical protein BACPLE_03126 [Bacteroides plebeius DSM 17135]
          Length = 264

 Score =  360 bits (923), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 165/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +   G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLHRIRTEGVRKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWP YDG  IDQIS  V++++
Sbjct: 61  WFLQGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPGYDGKFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ++ M LPPCH  FQFYV NG+LS Q+YQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLNNMNLPPCHAFFQFYVANGRLSLQMYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ DLQL+R+PR LP M INP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVDLQLTRTPRPLPTMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF YEDF L +Y+P   I  KVSV
Sbjct: 241 SFHYEDFQLENYDPWPHIAGKVSV 264


>gi|160882708|ref|ZP_02063711.1| hypothetical protein BACOVA_00666 [Bacteroides ovatus ATCC 8483]
 gi|156111878|gb|EDO13623.1| hypothetical protein BACOVA_00666 [Bacteroides ovatus ATCC 8483]
          Length = 264

 Score =  360 bits (923), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+ + DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTKKDDRTGTGTISIFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG IYG QWRSWPDY+G  IDQIS +V++++
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISEVVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV +G+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HT GD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMRINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264


>gi|325917331|ref|ZP_08179549.1| thymidylate synthase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536465|gb|EGD08243.1| thymidylate synthase [Xanthomonas vesicatoria ATCC 35937]
          Length = 264

 Score =  360 bits (923), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLRHV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLDLLRHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLQGDTNIGYLKDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELSQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY NHF+QA +QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYANHFDQARVQLTRAPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|160889228|ref|ZP_02070231.1| hypothetical protein BACUNI_01649 [Bacteroides uniformis ATCC 8492]
 gi|270295980|ref|ZP_06202180.1| thymidylate synthase [Bacteroides sp. D20]
 gi|156861235|gb|EDO54666.1| hypothetical protein BACUNI_01649 [Bacteroides uniformis ATCC 8492]
 gi|270273384|gb|EFA19246.1| thymidylate synthase [Bacteroides sp. D20]
          Length = 264

 Score =  360 bits (923), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGVEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWP+Y G  IDQIS  V++++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPNYKGGFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRDLPQMRINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y PH  I  KVSV
Sbjct: 241 DFKFEDFELVNYNPHPHIAGKVSV 264


>gi|325981748|ref|YP_004294150.1| thymidylate synthase [Nitrosomonas sp. AL212]
 gi|325531267|gb|ADZ25988.1| thymidylate synthase [Nitrosomonas sp. AL212]
          Length = 264

 Score =  360 bits (923), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++HVI  G  + DRTG+GT S FG+QMRFDL+ GFPL+TTKK H KS++HELL
Sbjct: 1   MRQYLELMQHVIDHGFQKTDRTGIGTLSIFGHQMRFDLNDGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RGD+NV YLH++GVSIWDEWAD +G LGPIYG QWRSW   DG  IDQ+  +++ + 
Sbjct: 61  WFIRGDTNVRYLHKYGVSIWDEWADVNGNLGPIYGQQWRSWMSADGQKIDQLQQVIKQII 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VS+WNV  + +M LPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 DTPDSRRMLVSSWNVGELHRMRLPPCHALFQFYVADNKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V     GEF+HTLGD HLY NH EQA  QLSR PR LP M +NP I  + 
Sbjct: 181 YALLTMMIAQVSNLGVGEFVHTLGDAHLYLNHLEQAREQLSRQPRPLPVMRLNPMIRTIS 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YEDF L +Y+PH  I A V+V
Sbjct: 241 EFEYEDFVLENYDPHPPIKAPVAV 264


>gi|253566116|ref|ZP_04843570.1| thymidylate synthase [Bacteroides sp. 3_2_5]
 gi|251945220|gb|EES85658.1| thymidylate synthase [Bacteroides sp. 3_2_5]
          Length = 264

 Score =  359 bits (922), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD+ G+LG IYG QWRSWP Y+G  IDQIS  V +++
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYNGGFIDQISEAVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I  KV+V
Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264


>gi|163852080|ref|YP_001640123.1| thymidylate synthase [Methylobacterium extorquens PA1]
 gi|163663685|gb|ABY31052.1| Thymidylate synthase [Methylobacterium extorquens PA1]
          Length = 264

 Score =  359 bits (922), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL
Sbjct: 1   MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GV+IWDEWAD +G+LGP+YG QWRSW   DG  +DQI+ I+  + 
Sbjct: 61  WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGGTVDQIAWILDEIA 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV NG+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVANGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY NH EQ  LQLSR PR LP++ +NP +  L 
Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  YEPH AI A V+V
Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264


>gi|90019999|ref|YP_525826.1| thymidylate synthase [Saccharophagus degradans 2-40]
 gi|122996594|sp|Q21NW5|TYSY_SACD2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|89949599|gb|ABD79614.1| thymidylate synthase [Saccharophagus degradans 2-40]
          Length = 277

 Score =  359 bits (922), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 163/277 (58%), Positives = 204/277 (73%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV   G+ + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL
Sbjct: 1   MKQYLDLMRHVRDTGTKKEDRTGTGTVSVFGYQMRFDLSEGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N  YL  +GV IW+EWA ++G+LGP+YG QWRSWP  DG  +DQ + +V+ ++
Sbjct: 61  WFLKGETNTQYLTDNGVRIWNEWATEEGDLGPVYGAQWRSWPTPDGGSLDQFALLVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRRHI+SAWN AL+              KMALPPCH LFQFYV + KLSCQLYQRS
Sbjct: 121 NKPDSRRHIISAWNPALLPDEGVSPQDNVRNGKMALPPCHTLFQFYVADNKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G + G+F+HT GD HLY NH EQ + QL+R P  L
Sbjct: 181 ADIFLGVPFNIASYALLTMMVAQVTGLELGDFVHTFGDAHLYLNHLEQVETQLAREPLPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP + D+ SF++EDF L  Y+ H  I A +S+
Sbjct: 241 PTMKINPEVKDIFSFKFEDFELVDYQAHPHISAPISI 277


>gi|330998283|ref|ZP_08322108.1| thymidylate synthase [Paraprevotella xylaniphila YIT 11841]
 gi|329568672|gb|EGG50473.1| thymidylate synthase [Paraprevotella xylaniphila YIT 11841]
          Length = 264

 Score =  359 bits (922), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +++ G ++ DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLHRIMEEGVEKSDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG IYG QWRSWPDY G  IDQI   V ++R
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQIQEAVDTIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +  M LPPCH  FQFYV  GKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLGNMNLPPCHAFFQFYVAKGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V G + G+F+HTLGD H+Y NH EQ  LQL+R PR LP+M +NP++  + 
Sbjct: 181 YALLLMMMAQVTGLKAGDFVHTLGDTHIYKNHLEQVKLQLTREPRPLPRMRLNPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +Y P   I   VSV
Sbjct: 241 DFKFEDFTLENYNPWPHIAGAVSV 264


>gi|304321193|ref|YP_003854836.1| thymidylate synthase [Parvularcula bermudensis HTCC2503]
 gi|303300095|gb|ADM09694.1| thymidylate synthase [Parvularcula bermudensis HTCC2503]
          Length = 264

 Score =  359 bits (922), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 165/264 (62%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H++  G  R DRTG GT S FG+QMRF+LS GFPL+TTKKVH KSVVHELL
Sbjct: 1   MQAYLSLLSHLLDNGVLRDDRTGTGTYSVFGHQMRFELSDGFPLVTTKKVHMKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  HGV IWDEWAD++G LGP+YG QWRSWP   G  IDQI+ +   +R
Sbjct: 61  WFLSGDTNIGYLKEHGVRIWDEWADENGNLGPVYGAQWRSWPGPGGKTIDQIAWVQNEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWN   +D+MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPTSRRLVVSAWNPGQLDQMALAPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA   G   G+F+H+ GDVHLY NH +QA  QL+R PR LPQ+ + P + D+ 
Sbjct: 181 YALLTHMLAQSTGLGVGDFVHSFGDVHLYTNHVDQAKQQLARQPRDLPQLRLAPEVSDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYE  T+  Y+PH AI A V+V
Sbjct: 241 DFRYEHITVEGYDPHPAIKAPVAV 264


>gi|53715018|ref|YP_101010.1| thymidylate synthase [Bacteroides fragilis YCH46]
 gi|62901263|sp|Q64PV5|TYSY_BACFR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|52217883|dbj|BAD50476.1| thymidylate synthase [Bacteroides fragilis YCH46]
          Length = 264

 Score =  359 bits (922), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD+ G+LG IYG QWRSWP YDG  IDQIS  V +++
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYDGGFIDQISEAVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++DF L +Y+PH  I  KV+V
Sbjct: 241 DFQFKDFELVNYDPHPHIAGKVAV 264


>gi|114319533|ref|YP_741216.1| thymidylate synthase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312527|sp|Q0ABR1|TYSY_ALHEH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|114225927|gb|ABI55726.1| thymidylate synthase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 264

 Score =  359 bits (922), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 165/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+ HV   G+ + DRTG GT S FG+QMRFDLS+GFP++TTKK+H +S++HELL
Sbjct: 1   MQAYLDLMAHVRHHGTPKSDRTGTGTLSVFGHQMRFDLSRGFPVVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GDSN++YL  +GVSIWDEWAD++G+LGPIYGVQWRSWP  DG  +DQ++ +++ LR
Sbjct: 61  WFLSGDSNIAYLKANGVSIWDEWADENGDLGPIYGVQWRSWPTPDGRRVDQLAQVLRDLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRRH+VSAWNV  +  MALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 EHPDSRRHLVSAWNVGELPNMALPPCHTLFQFYVAEGRLSCQLYQRSADIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + GEFI T GD HLY NH EQAD QL R P  LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQVCDLKPGEFIWTGGDCHLYTNHLEQADRQLQREPLPLPRLRLNPEVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYED  L  Y+ H  I A V+V
Sbjct: 241 AFRYEDIALEGYQHHPPIKAPVAV 264


>gi|220935909|ref|YP_002514808.1| Thymidylate synthase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254790255|sp|B8GN06|TYSY_THISH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219997219|gb|ACL73821.1| Thymidylate synthase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 277

 Score =  359 bits (922), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 167/277 (60%), Positives = 208/277 (75%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+R +++ G+ + DRTG GTRS FG+QMRFDLSKGFPL+TTKK+H KS++HELL
Sbjct: 1   MQPYLDLMRQLLEHGTVKSDRTGTGTRSLFGHQMRFDLSKGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  +GV IWDEWA +DGELGP+YG QWR+WP  DG  IDQIS +V+ +R
Sbjct: 61  WFLKGETNIAYLKDNGVRIWDEWATEDGELGPVYGRQWRAWPTPDGRHIDQISQVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWNVA +              +MAL PCH  FQFYV +G+LSCQLYQRS
Sbjct: 121 TRPDSRRLIVSAWNVAELPDEGISPKDNARAGRMALAPCHTFFQFYVADGRLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLT+M+A V   + G+F+HT GDVHLY+NH EQA  QLSR P  L
Sbjct: 181 ADVFLGVPFNIASYALLTLMVAQVTDLEPGDFVHTFGDVHLYSNHVEQAKEQLSREPYPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP +  L  FRYEDFTL  Y+ H  I A V++
Sbjct: 241 PKMHLNPEVKSLFDFRYEDFTLEGYQAHPHIKAPVAI 277


>gi|46202071|ref|ZP_00053813.2| COG0207: Thymidylate synthase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 264

 Score =  359 bits (922), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR +   G  + DRTG GT S FG+QMRFDLS GFPL+TTKK+H +S+  ELL
Sbjct: 1   MQQYLDLLRRIRAEGVTKTDRTGTGTTSVFGHQMRFDLSAGFPLVTTKKLHTRSIFVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  + VSIWDEWAD DG+LGP+YG QWRSW   DG  +DQI+ +V+ ++
Sbjct: 61  WFLRGDTNIRYLKDNKVSIWDEWADADGDLGPVYGKQWRSWACPDGRTVDQITQVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A I+ MALPPCHCLFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVAEGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY+NH EQA+LQLSR+P  LP++ +NP++ DL 
Sbjct: 181 YALLTHMMAQVTGLEVGDFVHTFGDAHLYSNHMEQAELQLSRAPLALPRLELNPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D  +  Y+ HA I A V+V
Sbjct: 241 AFTMDDIKVVDYQCHAHISAPVAV 264


>gi|224471861|sp|Q2W7P4|TYSY_MAGMM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 264

 Score =  359 bits (921), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 165/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQYLDLLR +   G  + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H +S+  ELL
Sbjct: 1   MHQYLDLLRRIQAEGVTKTDRTGTGTTSVFGHQMRFDLSRGFPLVTTKKLHTRSIFVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L  + VSIWDEWAD +G+LGP+YG QWRSW   DG+ +DQI+ +V+ +R
Sbjct: 61  WFLRGDTNIGWLKDNKVSIWDEWADANGDLGPVYGKQWRSWACPDGSTVDQITQVVEMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A I+ MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G F+HT GD HLY+NH EQA LQLSR+P  LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQVTGLEVGAFVHTFGDAHLYSNHMEQAALQLSRAPLPLPRLELNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D  +  Y+ HA I A V+V
Sbjct: 241 AFTMDDIKVVDYQCHAHIAAPVAV 264


>gi|146299231|ref|YP_001193822.1| thymidylate synthase [Flavobacterium johnsoniae UW101]
 gi|189036934|sp|A5FJV8|TYSY_FLAJO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|146153649|gb|ABQ04503.1| thymidylate synthase [Flavobacterium johnsoniae UW101]
          Length = 283

 Score =  359 bits (921), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 165/286 (57%), Positives = 211/286 (73%), Gaps = 25/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYLDLVKHVLENGNQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IWDEWAD +G+LGP+YG QWR+W   +   IDQIS ++  L+
Sbjct: 61  WFLKGDTNIKYLKENGVKIWDEWADSNGDLGPVYGHQWRNW---NSEEIDQISELITELK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYV---------DNGK 158
            +P SRR IVSAWN +++             +K ALPPCH  FQFYV           GK
Sbjct: 118 TNPNSRRMIVSAWNPSVLPDTKKSFEENVANNKAALPPCHAFFQFYVASPDLEKGETKGK 177

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQLYQRS D+FLG+PFNIASY+LLTMM+A V   + GEFIHT GD H+YNNHFEQ +L
Sbjct: 178 LSCQLYQRSADIFLGVPFNIASYALLTMMIAQVCDLEPGEFIHTFGDAHIYNNHFEQLEL 237

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QLSR P+ LP+MI+NP I ++  F Y+DFTL  Y+PH AI   V+V
Sbjct: 238 QLSREPKPLPKMILNPEIKNIFDFDYDDFTLVDYDPHPAIQGSVAV 283


>gi|89889399|ref|ZP_01200910.1| thymidylate synthase [Flavobacteria bacterium BBFL7]
 gi|89517672|gb|EAS20328.1| thymidylate synthase [Flavobacteria bacterium BBFL7]
          Length = 274

 Score =  359 bits (921), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 164/277 (59%), Positives = 210/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+H++  G+D+ DRTG GTRS FGYQMRF+L +GFP++TTKK+H KS++HELL
Sbjct: 1   MKQYHDLLQHILDHGTDKGDRTGTGTRSIFGYQMRFNLEEGFPMVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW+EWA+ +G+LGP+YG QWR+W + D   IDQI  IV++L+
Sbjct: 61  WFLTGDTNVKYLQDNGVRIWNEWANDNGDLGPVYGHQWRNWNNED---IDQIKDIVKTLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV + KLSCQLYQRS
Sbjct: 118 DNPNSRRMMVSAWNPSVMPDTSISFSENVANGKAALPPCHAFFQFYVSDNKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+L TMM+A V GF+YG+FIHT GDVH+Y+NH EQ  LQLSR  R L
Sbjct: 178 ADVFLGVPFNIASYALFTMMMAQVCGFEYGDFIHTFGDVHIYSNHMEQVALQLSRETRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP++ D+ +F++EDFTL +Y PH AI   V++
Sbjct: 238 PTMKINPDVKDIFNFKFEDFTLDNYNPHPAIKGAVAI 274


>gi|315225492|ref|ZP_07867305.1| thymidylate synthase [Capnocytophaga ochracea F0287]
 gi|314944590|gb|EFS96626.1| thymidylate synthase [Capnocytophaga ochracea F0287]
          Length = 274

 Score =  359 bits (921), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 169/277 (61%), Positives = 208/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLRH++  G  + DRTG GT S FGYQMRFDL+KGFPL+TTKK+H KSV++ELL
Sbjct: 1   MQTYHDLLRHILDNGYSKDDRTGTGTTSVFGYQMRFDLNKGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGV IW+EWAD++G+LGP+YG QWR W   +G  IDQI ++V++L+
Sbjct: 61  WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRHW---NGEAIDQIKTVVETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 118 QNPESRRIIVSAWNPSVLPDTGKSFTENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLTMMLA V   Q G+F+HT GDVH+YNNH EQ  LQLSR+PR L
Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +N  + DL +F YEDF L  Y+P+  I A+VSV
Sbjct: 238 PTMHLNRAVKDLFAFDYEDFRLEGYDPYPTIKAQVSV 274


>gi|325298388|ref|YP_004258305.1| Thymidylate synthase [Bacteroides salanitronis DSM 18170]
 gi|324317941|gb|ADY35832.1| Thymidylate synthase [Bacteroides salanitronis DSM 18170]
          Length = 264

 Score =  358 bits (920), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR +   G  + DRTG GT S FG+QMRF+L+ GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLRRIRTEGVQKHDRTGTGTISIFGHQMRFNLADGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L GD+NV YL  +GV IW+EWAD DG LG IYG QWRSWPDY+G VIDQI+  V+++R
Sbjct: 61  WMLSGDTNVHYLQENGVRIWNEWADADGNLGHIYGYQWRSWPDYEGGVIDQIAEAVETIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNVA +  M LPPCH  FQFYV +GKLS Q+YQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVADGKLSLQMYQRSADCFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHTLGD H+Y NH EQ DLQL+R PR LP+M +NP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTLGDAHIYLNHLEQVDLQLTREPRPLPKMRLNPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y P   I  KVSV
Sbjct: 241 GFKYEDFELTDYNPWPHIAGKVSV 264


>gi|21230261|ref|NP_636178.1| thymidylate synthase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769746|ref|YP_244508.1| thymidylate synthase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188992959|ref|YP_001904969.1| thymidylate synthase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|25091468|sp|Q8PCE7|TYSY_XANCP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|81304300|sp|Q4UR35|TYSY_XANC8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|21111806|gb|AAM40102.1| thymidylate synthase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575078|gb|AAY50488.1| thymidylate synthase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167734719|emb|CAP52929.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 264

 Score =  358 bits (920), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+HV+++G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLELLQHVLEYGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLQGDTNIAYLKDNQVRIWDEWADANGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP++ DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRPLPTLRLNPDVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIDGYDPHPAIKAPVAV 264


>gi|153808882|ref|ZP_01961550.1| hypothetical protein BACCAC_03183 [Bacteroides caccae ATCC 43185]
 gi|149128708|gb|EDM19926.1| hypothetical protein BACCAC_03183 [Bacteroides caccae ATCC 43185]
          Length = 264

 Score =  358 bits (920), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG IYG QWRSWPDY+G  IDQIS  +++++
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV +G+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 QNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HT GD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFKFEDFELVNYDPHPHIAGVVAV 264


>gi|120599815|ref|YP_964389.1| thymidylate synthase [Shewanella sp. W3-18-1]
 gi|146292249|ref|YP_001182673.1| thymidylate synthase [Shewanella putrefaciens CN-32]
 gi|166231733|sp|A4Y4J1|TYSY_SHEPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231735|sp|A1RME0|TYSY_SHESW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120559908|gb|ABM25835.1| thymidylate synthase [Shewanella sp. W3-18-1]
 gi|145563939|gb|ABP74874.1| thymidylate synthase [Shewanella putrefaciens CN-32]
 gi|319425548|gb|ADV53622.1| thymidylate synthase [Shewanella putrefaciens 200]
          Length = 264

 Score =  358 bits (920), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL
Sbjct: 1   MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  + VSIWDEWAD +G+LGP+YG QWRSWP   G+ IDQIS ++  ++
Sbjct: 61  WFLKGETNIAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 AQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR P+ LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTVLQLSREPKPLPLMTILRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF L +Y PH  I A V+V
Sbjct: 241 DYQFEDFELTNYNPHPHIKAPVAV 264


>gi|317479583|ref|ZP_07938710.1| thymidylate synthase [Bacteroides sp. 4_1_36]
 gi|316904245|gb|EFV26072.1| thymidylate synthase [Bacteroides sp. 4_1_36]
          Length = 264

 Score =  358 bits (920), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGVEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWP+Y G  IDQIS  V++++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPNYKGGFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRDLPQMRINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y PH  I  KVSV
Sbjct: 241 DFKFEDFELINYNPHPHIAGKVSV 264


>gi|34541643|ref|NP_906122.1| thymidylate synthase [Porphyromonas gingivalis W83]
 gi|188995925|ref|YP_001930177.1| thymidylate synthase [Porphyromonas gingivalis ATCC 33277]
 gi|34397961|gb|AAQ67021.1| thymidylate synthase [Porphyromonas gingivalis W83]
 gi|188595605|dbj|BAG34580.1| thymidylate synthase [Porphyromonas gingivalis ATCC 33277]
          Length = 267

 Score =  358 bits (920), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR ++  G  + DRTG GT S FG+QM FDL +GFPLLTTK++H KS+++ELL
Sbjct: 4   MKQYLDLLRRILDEGVRKEDRTGTGTISVFGHQMCFDLEEGFPLLTTKRLHLKSIIYELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL  HGV IW+EWAD++G+LGPIYG QWRSWPDY G  IDQ+  +++ LR
Sbjct: 64  WFLRGDTNVHYLQEHGVRIWNEWADENGDLGPIYGYQWRSWPDYRGGHIDQMQEVLRQLR 123

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV +WNV  +  M LPPCHC  QFYV +G+LS QLYQRS D FLGIPFNIAS
Sbjct: 124 EEPDSRRIIVCSWNVGQLADMHLPPCHCFMQFYVADGRLSLQLYQRSADSFLGIPFNIAS 183

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G F+HTLGD H+Y NH EQ  LQLSR PR LP+M++NP + DL 
Sbjct: 184 YALLLQMIAHVTGLKPGRFVHTLGDAHIYLNHLEQVQLQLSREPRALPRMVLNPEVSDLF 243

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH  I   V+V
Sbjct: 244 DFRYEDFRLEGYDPHPHIAGVVAV 267


>gi|62901348|sp|Q7MTB5|TYSY_PORGI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 264

 Score =  358 bits (920), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR ++  G  + DRTG GT S FG+QM FDL +GFPLLTTK++H KS+++ELL
Sbjct: 1   MKQYLDLLRRILDEGVRKEDRTGTGTISVFGHQMCFDLEEGFPLLTTKRLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL  HGV IW+EWAD++G+LGPIYG QWRSWPDY G  IDQ+  +++ LR
Sbjct: 61  WFLRGDTNVHYLQEHGVRIWNEWADENGDLGPIYGYQWRSWPDYRGGHIDQMQEVLRQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV +WNV  +  M LPPCHC  QFYV +G+LS QLYQRS D FLGIPFNIAS
Sbjct: 121 EEPDSRRIIVCSWNVGQLADMHLPPCHCFMQFYVADGRLSLQLYQRSADSFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G F+HTLGD H+Y NH EQ  LQLSR PR LP+M++NP + DL 
Sbjct: 181 YALLLQMIAHVTGLKPGRFVHTLGDAHIYLNHLEQVQLQLSREPRALPRMVLNPEVSDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH  I   V+V
Sbjct: 241 DFRYEDFRLEGYDPHPHIAGVVAV 264


>gi|325922408|ref|ZP_08184177.1| thymidylate synthase [Xanthomonas gardneri ATCC 19865]
 gi|325547105|gb|EGD18190.1| thymidylate synthase [Xanthomonas gardneri ATCC 19865]
          Length = 264

 Score =  358 bits (919), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD DG LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLQGDTNIGYLKDNQVRIWDEWADADGNLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ D  +  Y+PH AI A V+V
Sbjct: 241 AFRFADIAIDGYDPHPAIKAPVAV 264


>gi|58583375|ref|YP_202391.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84625200|ref|YP_452572.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|166710720|ref|ZP_02241927.1| thymidylate synthase [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|188575368|ref|YP_001912297.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|62901157|sp|Q5GWB5|TYSY_XANOR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123752707|sp|Q2NZH9|TYSY_XANOM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|58427969|gb|AAW77006.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84369140|dbj|BAE70298.1| Thymidylate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188519820|gb|ACD57765.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 264

 Score =  358 bits (919), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLQGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHF+QA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFDQARKQLTRTPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|224536152|ref|ZP_03676691.1| hypothetical protein BACCELL_01018 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522234|gb|EEF91339.1| hypothetical protein BACCELL_01018 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 264

 Score =  358 bits (919), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G  + DRTG GT S FG+QMRF++  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGVHKEDRTGTGTISVFGHQMRFNMEDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  HGV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  V+++ 
Sbjct: 61  WFLNGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGSIDQISEAVETIL 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I+ M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDINNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y+PH  I  KVSV
Sbjct: 241 DFQYEDFELVNYDPHPHIAGKVSV 264


>gi|254522948|ref|ZP_05135003.1| thymidylate synthase [Stenotrophomonas sp. SKA14]
 gi|219720539|gb|EED39064.1| thymidylate synthase [Stenotrophomonas sp. SKA14]
          Length = 264

 Score =  358 bits (919), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGGAIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QLSR PR LP++ +NP++ DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPDVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++D  +  Y+PH AI A V+V
Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264


>gi|194364440|ref|YP_002027050.1| thymidylate synthase [Stenotrophomonas maltophilia R551-3]
 gi|194347244|gb|ACF50367.1| Thymidylate synthase [Stenotrophomonas maltophilia R551-3]
          Length = 264

 Score =  358 bits (918), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKAYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGGEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QLSR PR LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++D  +  Y+PH AI A V+V
Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264


>gi|78046451|ref|YP_362626.1| thymidylate synthase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|123744059|sp|Q3BX87|TYSY_XANC5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|78034881|emb|CAJ22526.1| thymidylate synthase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 264

 Score =  358 bits (918), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  Y PH AI A V+V
Sbjct: 241 GFRFEDIAIEGYAPHPAIKAPVAV 264


>gi|254561824|ref|YP_003068919.1| thymidylate synthetase [Methylobacterium extorquens DM4]
 gi|254269102|emb|CAX25065.1| thymidylate synthetase [Methylobacterium extorquens DM4]
          Length = 264

 Score =  358 bits (918), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL
Sbjct: 1   MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GV+IWDEWAD +G+LGP+YG QWRSW   DG+ +DQI+ I+  + 
Sbjct: 61  WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGSTVDQIAWILDEIA 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY NH EQ  LQLSR PR LP++ +NP +  L 
Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  YEPH AI A V+V
Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264


>gi|332877806|ref|ZP_08445545.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684271|gb|EGJ57129.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 264

 Score =  358 bits (918), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +++ G ++ DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLHRILEEGVEKSDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG IYG QWRSWPDY G  IDQI   V +++
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQIQEAVDTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +  M LPPCH  FQFYV NGKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLGNMNLPPCHAFFQFYVANGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V G + G+F+HTLGD H+Y NH EQ  LQL+R PR LP+M +NP++  + 
Sbjct: 181 YALLLMMMAQVTGLKAGDFVHTLGDTHIYKNHLEQVKLQLTREPRPLPRMKLNPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL  Y P   I   VSV
Sbjct: 241 DFKFEDFTLEDYNPWPHIAGAVSV 264


>gi|224025685|ref|ZP_03644051.1| hypothetical protein BACCOPRO_02425 [Bacteroides coprophilus DSM
           18228]
 gi|224018921|gb|EEF76919.1| hypothetical protein BACCOPRO_02425 [Bacteroides coprophilus DSM
           18228]
          Length = 264

 Score =  358 bits (918), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +   G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLHRIRTEGVRKDDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY+G  IDQIS  V+++R
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYEGGFIDQISEAVETIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNVA +  M LPPCH  FQFYV +G+LS Q+YQRS D FLG+PFNIAS
Sbjct: 121 KNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVADGQLSLQMYQRSADSFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ DLQLSR PR LP+MI+NP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLKPGDFIHTLGDAHIYLNHLEQVDLQLSREPRPLPRMILNPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+P   I  KVSV
Sbjct: 241 DFKYEDFQLEGYDPWPHIAGKVSV 264


>gi|16126363|ref|NP_420927.1| thymidylate synthase [Caulobacter crescentus CB15]
 gi|221235145|ref|YP_002517581.1| thymidylate synthase [Caulobacter crescentus NA1000]
 gi|25091488|sp|Q9A6H0|TYSY_CAUCR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|13423613|gb|AAK24095.1| thymidylate synthase [Caulobacter crescentus CB15]
 gi|220964317|gb|ACL95673.1| thymidylate synthase [Caulobacter crescentus NA1000]
          Length = 279

 Score =  357 bits (917), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 165/262 (62%), Positives = 206/262 (78%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL LL  +++ G  R DRTG GT   FG Q+RFDL+KGFP+LTTKK+H +S++ ELLWF
Sbjct: 19  QYLTLLADILENGVQRGDRTGTGTLGVFGRQIRFDLAKGFPVLTTKKLHLRSIIIELLWF 78

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YL  +GV IWDEWAD++G+LGP+YG QWRSW   DG VIDQIS++V++L+A+
Sbjct: 79  LKGDTNIAYLKDNGVRIWDEWADENGDLGPVYGKQWRSWATPDGRVIDQISALVENLKAN 138

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRRHIV+AWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 139 PNSRRHIVTAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 198

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT+M+A V+G + GEF+HT GD HLY NH +QA  QL+R P   P M I  +  DL  F
Sbjct: 199 LLTLMVAKVVGLEPGEFVHTFGDAHLYLNHLDQAREQLTREPFDFPTMKI-ADKRDLFGF 257

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YEDFTL  Y+ H  I A+VSV
Sbjct: 258 EYEDFTLEGYQAHPHIKAEVSV 279


>gi|289663561|ref|ZP_06485142.1| thymidylate synthase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289670949|ref|ZP_06492024.1| thymidylate synthase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 264

 Score =  357 bits (917), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLQGDTNIGYLSNNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NH +QA  QL+R+PR LP + +NP++ DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHVDQAREQLTRTPRALPTLRLNPDVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|83310426|ref|YP_420690.1| thymidylate synthase [Magnetospirillum magneticum AMB-1]
 gi|82945267|dbj|BAE50131.1| Thymidylate synthase [Magnetospirillum magneticum AMB-1]
          Length = 275

 Score =  357 bits (917), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           +HQYLDLLR +   G  + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H +S+  ELL
Sbjct: 12  LHQYLDLLRRIQAEGVTKTDRTGTGTTSVFGHQMRFDLSRGFPLVTTKKLHTRSIFVELL 71

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L  + VSIWDEWAD +G+LGP+YG QWRSW   DG+ +DQI+ +V+ +R
Sbjct: 72  WFLRGDTNIGWLKDNKVSIWDEWADANGDLGPVYGKQWRSWACPDGSTVDQITQVVEMIR 131

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A I+ MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 132 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 191

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G F+HT GD HLY+NH EQA LQLSR+P  LP++ +NP + DL 
Sbjct: 192 YALLTHMVAQVTGLEVGAFVHTFGDAHLYSNHMEQAALQLSRAPLPLPRLELNPEVKDLF 251

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D  +  Y+ HA I A V+V
Sbjct: 252 AFTMDDIKVVDYQCHAHIAAPVAV 275


>gi|190572858|ref|YP_001970703.1| thymidylate synthase [Stenotrophomonas maltophilia K279a]
 gi|190010780|emb|CAQ44389.1| putative thymidylate synthase [Stenotrophomonas maltophilia K279a]
          Length = 264

 Score =  357 bits (917), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKAYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGREIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QLSR PR LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++D  +  Y+PH AI A V+V
Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264


>gi|332291421|ref|YP_004430030.1| thymidylate synthase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169507|gb|AEE18762.1| thymidylate synthase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 274

 Score =  357 bits (917), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 160/277 (57%), Positives = 212/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+V+ELL
Sbjct: 1   MKQYHDLIKHVLENGNQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWR+W   +G+ IDQI  IV++L+
Sbjct: 61  WFLQGDTNIKYLQENGVRIWNEWADENGDLGPVYGYQWRNW---NGDEIDQIKDIVETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 TNPNSRRMLVSAWNPSVMPDTSASFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+Y+NH EQ +LQLSR  RTL
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYSNHMEQVELQLSREFRTL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + INP++ D+  F ++DFTL +Y PH  I   V++
Sbjct: 238 PTLKINPDVKDIFGFTFDDFTLENYNPHPHIKGAVAI 274


>gi|225011474|ref|ZP_03701912.1| Thymidylate synthase [Flavobacteria bacterium MS024-2A]
 gi|225003977|gb|EEG41949.1| Thymidylate synthase [Flavobacteria bacterium MS024-2A]
          Length = 274

 Score =  357 bits (917), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 160/277 (57%), Positives = 212/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HV+  GS++ DRTG GT+S FGYQMRFDLSKGFPL+TTKK+H+KS+VHELL
Sbjct: 1   MKQYLDLVNHVLATGSEKTDRTGTGTKSVFGYQMRFDLSKGFPLVTTKKIHFKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD+ G LGP+YG QWR+W   +   IDQI  ++ +L+
Sbjct: 61  WFLKGDTNIEYLQENGVRIWNEWADEKGNLGPVYGHQWRNW---NSEGIDQIQEVINTLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++             +K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 TNPDSRRMLVSAWNPSVLPDTKVSFSKNVANNKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLT+M+A V G++ G+F+H+ GDVH+Y+NHFEQ   QLSR+P+ L
Sbjct: 178 ADVFLGVPFNIASYALLTLMVAQVCGYEPGDFVHSFGDVHIYSNHFEQLKEQLSRAPKAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP I ++  F Y+DF L +Y+P+  I  KV++
Sbjct: 238 PEMHLNPEIKNIFDFTYDDFELINYDPYPLIKGKVAI 274


>gi|295135495|ref|YP_003586171.1| thymidylate synthase [Zunongwangia profunda SM-A87]
 gi|294983510|gb|ADF53975.1| thymidylate synthase [Zunongwangia profunda SM-A87]
          Length = 274

 Score =  357 bits (917), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 161/277 (58%), Positives = 211/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL++++  G+++ DRTG GT+S FGYQMRF+LS+GFP++TTKKVH KS+++ELL
Sbjct: 1   MKQYHDLLQYILDHGAEKGDRTGTGTKSVFGYQMRFNLSEGFPMVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD+ G+LGP+YG QWR+W   +   IDQIS I+++L+
Sbjct: 61  WFLKGDTNIKYLQENGVRIWNEWADEHGDLGPVYGHQWRNW---NSEEIDQISEIIETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 TNPNSRRMLVSAWNPSVMPDTAVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+L TMM+A V G++ G+FIHT GDVH+Y+NH EQ  LQLSR+PR L
Sbjct: 178 ADVFLGVPFNIASYALFTMMMAQVCGYEPGDFIHTFGDVHIYSNHMEQVKLQLSRTPRAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP I ++  F +EDF L  Y+PH AI  KV+V
Sbjct: 238 PIMKMNPEITNIFDFSFEDFKLEGYDPHPAIKGKVAV 274


>gi|240139408|ref|YP_002963883.1| thymidylate synthetase [Methylobacterium extorquens AM1]
 gi|240009380|gb|ACS40606.1| thymidylate synthetase [Methylobacterium extorquens AM1]
          Length = 264

 Score =  357 bits (917), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL
Sbjct: 1   MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GV+IWDEWAD +G+LGP+YG QWRSW   DG  +DQI+ I+  + 
Sbjct: 61  WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGGTVDQIAWILDEIA 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY NH EQ  LQLSR PR LP++ +NP +  L 
Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  YEPH AI A V+V
Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264


>gi|302383585|ref|YP_003819408.1| thymidylate synthase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194213|gb|ADL01785.1| thymidylate synthase [Brevundimonas subvibrioides ATCC 15264]
          Length = 288

 Score =  357 bits (917), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 165/262 (62%), Positives = 201/262 (76%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LLR ++  G  R DRTG GT   FG QMRFDLSKGFPLLTTKK+H +S++ ELLWF
Sbjct: 28  QYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPLLTTKKLHLRSIIVELLWF 87

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG++N+ +L  +G SIWDEWAD+ GELGP+YG QWRSW   +G  IDQI+ +++ L+ +
Sbjct: 88  LRGETNIRWLKDNGCSIWDEWADESGELGPVYGKQWRSWAAPNGESIDQIARLIEGLKTN 147

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRRHIVSAWN A I+ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 148 PNSRRHIVSAWNPADIEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 207

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLTMM+A V+G + G+F+HT GD HLY+NH EQA LQL+R P  LP M I P   DL +F
Sbjct: 208 LLTMMVAEVVGLEPGDFVHTFGDAHLYSNHIEQAQLQLTRQPLALPTMTIAPK-RDLFAF 266

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
              DF L  YE H  I A V++
Sbjct: 267 EPGDFVLSGYEAHPHIKAAVAI 288


>gi|256820074|ref|YP_003141353.1| thymidylate synthase [Capnocytophaga ochracea DSM 7271]
 gi|256581657|gb|ACU92792.1| thymidylate synthase [Capnocytophaga ochracea DSM 7271]
          Length = 274

 Score =  357 bits (916), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 168/277 (60%), Positives = 208/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLRH++  G  + DRTG GT S FGYQMRFDL+KGFPL+TTKK+H KSV++ELL
Sbjct: 1   MQTYHDLLRHILDNGYSKDDRTGTGTTSVFGYQMRFDLNKGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGV IW+EWAD++G+LGP+YG QWR W   +G  IDQI ++V++L+
Sbjct: 61  WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRHW---NGEAIDQIKTVVETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 118 QNPESRRIIVSAWNPSVLPDTGKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLTMMLA V   Q G+F+HT GDVH+YNNH EQ  LQLSR+PR L
Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +N  + DL +F Y+DF L  Y+P+  I A+VSV
Sbjct: 238 PTMHLNRAVKDLFAFDYDDFRLEGYDPYPTIKAQVSV 274


>gi|114798205|ref|YP_759189.1| thymidylate synthase [Hyphomonas neptunium ATCC 15444]
 gi|122942752|sp|Q0C504|TYSY_HYPNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|114738379|gb|ABI76504.1| thymidylate synthase [Hyphomonas neptunium ATCC 15444]
          Length = 264

 Score =  357 bits (916), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  LLR +++ G  R DRTGVGT   FG QMRFDLS+GFP++TTK++H +S++ ELL
Sbjct: 1   MQQYQALLRDILENGHKRGDRTGVGTIGVFGRQMRFDLSEGFPMVTTKRLHLRSIIVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  +GVSIWDEWAD++G+LGP+YG QWRSW   +G  IDQI  ++  +R
Sbjct: 61  WFLRGDTNIAYLKENGVSIWDEWADENGDLGPVYGKQWRSWATPNGEAIDQIQWVLNEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++ MALPPCHCLFQF V +GKL+CQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNPADVNDMALPPCHCLFQFNVMDGKLNCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G Q GEF+HT GD HLY NH EQA+LQL+R PR LP + +NP+  DL 
Sbjct: 181 YALLTMMMARATGLQPGEFVHTFGDAHLYLNHLEQAELQLTREPRDLPTIHMNPDKADLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF +  Y PH  I A V+V
Sbjct: 241 GWEYEDFRVDGYAPHPHIKAPVAV 264


>gi|294665699|ref|ZP_06730974.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292604541|gb|EFF47917.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 347

 Score =  357 bits (916), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 159/261 (60%), Positives = 206/261 (78%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELLWFL
Sbjct: 87  YLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELLWFL 146

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++ +P
Sbjct: 147 KGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIKRNP 206

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIASY+L
Sbjct: 207 DSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIASYAL 266

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL +FR
Sbjct: 267 LTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRAPRALPTLRLNPEVTDLFAFR 326

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y+PH AI A V+V
Sbjct: 327 FEDIAIEGYDPHPAIKAPVAV 347


>gi|226313973|ref|YP_002773869.1| thymidylate synthase [Brevibacillus brevis NBRC 100599]
 gi|254790230|sp|C0ZI91|TYSY_BREBN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226096923|dbj|BAH45365.1| thymidylate synthase [Brevibacillus brevis NBRC 100599]
          Length = 264

 Score =  357 bits (915), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 158/264 (59%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL + ++  G  + DRTG GT S FG+QMRFDLS+GFP++TTKK+H KS++HELL
Sbjct: 1   MKQYLDLCQRILDEGVIKEDRTGTGTTSVFGHQMRFDLSEGFPMVTTKKLHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW+EWAD++G+LGP+YG QWRS+   DG  +DQI  ++  ++
Sbjct: 61  WFLSGDTNVRYLQENGVRIWNEWADENGDLGPVYGSQWRSFTGRDGKTVDQIQWVIDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +DKMALPPCH LFQFYV NGKLSCQLYQRSGD FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPAELDKMALPPCHLLFQFYVANGKLSCQLYQRSGDTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT+GD HLY NH EQ  LQL+R P+ LP++++NP++  + 
Sbjct: 181 YALLTHMVAHVTGLEVGDFVHTIGDAHLYLNHIEQVKLQLTREPKPLPKLVLNPDVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YED  +  YE H  I  +V+V
Sbjct: 241 DFKYEDIEIVGYESHPHIKGEVAV 264


>gi|332879843|ref|ZP_08447532.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332682220|gb|EGJ55128.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 274

 Score =  357 bits (915), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 166/277 (59%), Positives = 207/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLRH++  G  + DRTG GT S FGYQMRFDL++GFPL+TTKK+H KSV++ELL
Sbjct: 1   MKIYQDLLRHILANGYSKDDRTGTGTTSVFGYQMRFDLNEGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ HGV IW+EWAD +G+LGP+YG QWR+W   +G  IDQ+ ++V +L+
Sbjct: 61  WFLKGDTNIGYLNEHGVRIWNEWADPNGDLGPVYGAQWRNW---NGEAIDQLKAVVDTLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 118 HNPESRRIIVSAWNPSVLPDTRKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLTMMLA V   Q G+F+HT GDVH+YNNH EQ  LQLSR+PR L
Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +F Y DF L  Y+P+  I A V+V
Sbjct: 238 PTMHLNPAVKDLFAFNYTDFRLEGYDPYPTIKAAVAV 274


>gi|84496920|ref|ZP_00995774.1| thymidylate synthase [Janibacter sp. HTCC2649]
 gi|84383688|gb|EAP99569.1| thymidylate synthase [Janibacter sp. HTCC2649]
          Length = 263

 Score =  357 bits (915), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 168/264 (63%), Positives = 205/264 (77%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  ++  G D+ DRTG GTRS FG+QMRFDLS GFP++TTKKVH KS++ ELL
Sbjct: 1   MRQYHDLLNRILDEGVDKSDRTGTGTRSVFGHQMRFDLSDGFPVVTTKKVHLKSIIGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L   G+SIWDEWAD++G+LGP+YG QWRSWP  DG  +DQI+ +++ +R
Sbjct: 61  WFLRGDTNVRWLQERGISIWDEWADENGDLGPVYGHQWRSWPTPDGRQVDQIAKVIEGIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA +D MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHALFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A +   + GEF+HTLGD HLY+NH EQA LQL+R PR LP M I P    + 
Sbjct: 181 YALLTMMVAQLTDLEPGEFVHTLGDAHLYSNHLEQARLQLTREPRDLPTMRIAPKTA-ID 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F  +DF L  Y+PH  I A ++V
Sbjct: 240 DFDLDDFELVGYDPHPGIKAPIAV 263


>gi|298372619|ref|ZP_06982609.1| thymidylate synthase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275523|gb|EFI17074.1| thymidylate synthase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 264

 Score =  356 bits (914), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  ++  G++R DRTG GT   FG+QMRFDL +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYHDLLNRILNEGTERSDRTGTGTIGIFGHQMRFDLRQGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GVSIW+EWAD +G+LG IYG QWRSW  YDG  IDQIS   ++++
Sbjct: 61  WFLKGDTNVRYLQDNGVSIWNEWADANGDLGHIYGYQWRSWRGYDGETIDQISEAEETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DPYSRR IV+AWNV  +  M LPPCH  FQFYV NGKLS Q+YQRS DVFLG+PFNIAS
Sbjct: 121 NDPYSRRIIVNAWNVGDLKNMNLPPCHTFFQFYVANGKLSLQMYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G + GEF+HTLGD H+Y NH EQ  LQL+R PR LP+M IN  +  + 
Sbjct: 181 YALLLQMMAQTTGLEAGEFVHTLGDAHIYKNHLEQVQLQLTREPRPLPKMNINKEVRSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+P+  I  KV+V
Sbjct: 241 DFRYEDFCLTDYDPYPHIAGKVAV 264


>gi|218530838|ref|YP_002421654.1| Thymidylate synthase [Methylobacterium chloromethanicum CM4]
 gi|254790242|sp|B7KQG2|TYSY_METC4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|218523141|gb|ACK83726.1| Thymidylate synthase [Methylobacterium chloromethanicum CM4]
          Length = 264

 Score =  356 bits (914), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL
Sbjct: 1   MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GV+IWDEWAD +G+LGP+YG QWRSW   +G  +DQI+ I+  + 
Sbjct: 61  WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPEGGTVDQIAWILDEIA 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY NH EQ  LQLSR PR LP++ +NP +  L 
Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  YEPH AI A V+V
Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264


>gi|91794130|ref|YP_563781.1| thymidylate synthase [Shewanella denitrificans OS217]
 gi|123060707|sp|Q12KG8|TYSY_SHEDO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91716132|gb|ABE56058.1| thymidylate synthase [Shewanella denitrificans OS217]
          Length = 264

 Score =  356 bits (914), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L+ H++  G+ + DRTG GTRS FGYQMRFDL++GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLALMEHILAHGAVKTDRTGTGTRSVFGYQMRFDLNQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH H VSIWDEWAD  G LGP+YG QWRSWP   G  +DQIS I++ ++
Sbjct: 61  WFLQGDTNVAYLHEHNVSIWDEWADDKGNLGPVYGAQWRSWPTQSGKAVDQISQIIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  +DKMAL PCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TQPDSRRLIVSAWNVGELDKMALAPCHALFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR P  LPQM I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTKLQLSREPHALPQMNILRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L +Y+PH  I A V++
Sbjct: 241 DYQFDDFELVNYQPHPHIKAPVAI 264


>gi|329911715|ref|ZP_08275594.1| Thymidylate synthase [Oxalobacteraceae bacterium IMCC9480]
 gi|327545812|gb|EGF30934.1| Thymidylate synthase [Oxalobacteraceae bacterium IMCC9480]
          Length = 264

 Score =  356 bits (914), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+++ DRTG GTRS FGYQMRF L  GFPLLTTKK+H KS++HEL+
Sbjct: 1   MRQYLDFMRHVQQHGTEKTDRTGTGTRSVFGYQMRFALQDGFPLLTTKKLHLKSILHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N++YL  +GVSIWD+WAD DG LGPIYG QWRSWP  DG+ IDQI+ ++  ++
Sbjct: 61  WFLNGATNIAYLKENGVSIWDDWADADGNLGPIYGYQWRSWPTPDGSHIDQITQVMDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I  M LPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRMIVSAWNVADIPNMKLPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + G+F+ T GD HLY+NH EQ DLQL+R+P+ LP ++I      + 
Sbjct: 181 YALLTHMMAQQAGLEVGDFVWTGGDCHLYSNHMEQVDLQLTRTPQALPTLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y P A I A V+V
Sbjct: 241 DYRFEDFEITGYTPDAHIKAPVAV 264


>gi|15838923|ref|NP_299611.1| thymidylate synthase [Xylella fastidiosa 9a5c]
 gi|22096234|sp|Q9PB13|TYSY_XYLFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|9107503|gb|AAF85131.1|AE004044_2 thymidylate synthase [Xylella fastidiosa 9a5c]
          Length = 264

 Score =  356 bits (913), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N++YL +H V IWDEWAD  GELGP+YG QWR W   DG+ IDQI  +++ ++
Sbjct: 61  WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLLEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA V G   G+F+HTLGD HLY NH EQA +QL R PR  P +++NP + DL 
Sbjct: 181 YALLTHMLAQVTGLAVGDFVHTLGDAHLYANHVEQASVQLERVPRPQPVLMLNPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y+D  +  Y+P+ AI A V+V
Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264


>gi|42524608|ref|NP_969988.1| thymidylate synthase [Bdellovibrio bacteriovorus HD100]
 gi|62901320|sp|Q6MID2|TYSY_BDEBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|39576818|emb|CAE78047.1| thyA [Bdellovibrio bacteriovorus HD100]
          Length = 264

 Score =  356 bits (913), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ V++ G  + DRTG GT S FGYQMR++L +GFPLLTTKK+H +S+ HELL
Sbjct: 1   MKQYHDLIKTVLEHGVKKEDRTGTGTISMFGYQMRYNLQEGFPLLTTKKLHTRSIFHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YLH + V+IWDEWAD++G LGP+YG QWRSW   DG  IDQI+++V+ ++
Sbjct: 61  WFLKGETNIKYLHDNKVTIWDEWADENGNLGPVYGKQWRSWETADGRTIDQITNVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V A+N   +DKMALPPCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPNSRRMLVVAFNPGDVDKMALPPCHAFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + G+F+HTLGD HLY NH EQA+LQL+R  R LPQ+ +NP   DL 
Sbjct: 181 YALLTHMIAQVCDLEVGDFVHTLGDAHLYLNHLEQANLQLTREFRPLPQLKLNPAKKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YED  +  Y+PH AI A+V+V
Sbjct: 241 DFTYEDIEIIGYDPHPAIKAEVAV 264


>gi|163753075|ref|ZP_02160199.1| Thymidylate synthase [Kordia algicida OT-1]
 gi|161326807|gb|EDP98132.1| Thymidylate synthase [Kordia algicida OT-1]
          Length = 274

 Score =  356 bits (913), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 158/277 (57%), Positives = 211/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS++HELL
Sbjct: 1   MRQYLDLVKHVLEHGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWR+W   +   IDQ+S ++++L+
Sbjct: 61  WFIKGDTNIKYLQENGVRIWNEWADENGDLGPVYGHQWRNW---NSESIDQLSEVIETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMMVSAWNPSVLPNTKVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLTMM+A V G++YG+FIHT GD H+Y+NHFEQ  LQL+R P  L
Sbjct: 178 ADVFLGVPFNIASYALLTMMMAQVCGYEYGDFIHTFGDAHIYSNHFEQVKLQLTREPYPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP I  +  F +EDF L +Y+ H  I   V++
Sbjct: 238 PTMKINPEIKSIFDFTFEDFELVNYQHHPRIKGAVAI 274


>gi|148361180|ref|YP_001252387.1| thymidylate synthase [Legionella pneumophila str. Corby]
 gi|296108515|ref|YP_003620216.1| thymidylate synthase [Legionella pneumophila 2300/99 Alcoy]
 gi|166231709|sp|A5II41|TYSY_LEGPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148282953|gb|ABQ57041.1| thymidylate synthase (TS) [Legionella pneumophila str. Corby]
 gi|295650417|gb|ADG26264.1| thymidylate synthase [Legionella pneumophila 2300/99 Alcoy]
          Length = 264

 Score =  355 bits (912), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL
Sbjct: 1   MKTYLQLLEHILQQGVEKSDRTGTGTLSVFGYQMRFDLTKGFPLVTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG+ IDQ+S +VQ ++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGHTIDQLSDVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A        EFI T GD HLY NH EQA +QL+R P  LP + I      L 
Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLTIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +Y+ H AI A ++V
Sbjct: 241 DYAYEDFEFVNYQSHPAIKAPIAV 264


>gi|54298860|ref|YP_125229.1| thymidylate synthase [Legionella pneumophila str. Paris]
 gi|62901234|sp|Q5X119|TYSY_LEGPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|53752645|emb|CAH14080.1| Thymidylate synthase [Legionella pneumophila str. Paris]
          Length = 264

 Score =  355 bits (912), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL
Sbjct: 1   MKTYLQLLEHILQQGVEKSDRTGTGTLSVFGYQMRFDLTKGFPLVTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG+ IDQ+S +VQ ++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGHTIDQLSDVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A        EFI T GD HLY NH EQA +QL+R P  LP + I      L 
Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLTIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +Y+ H AI A ++V
Sbjct: 241 DYAYEDFEFLNYQSHPAIKAPIAV 264


>gi|325928230|ref|ZP_08189435.1| thymidylate synthase [Xanthomonas perforans 91-118]
 gi|325541390|gb|EGD12927.1| thymidylate synthase [Xanthomonas perforans 91-118]
          Length = 264

 Score =  355 bits (911), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 158/264 (59%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+HV++ G+++ DRTG GTRS FG+QMRF L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFHLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NG+LSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGRLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED ++  Y+PH AI A V+V
Sbjct: 241 AFRFEDISIEGYDPHPAIKAPVAV 264


>gi|126173426|ref|YP_001049575.1| thymidylate synthase [Shewanella baltica OS155]
 gi|166231730|sp|A3D1U3|TYSY_SHEB5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|125996631|gb|ABN60706.1| thymidylate synthase [Shewanella baltica OS155]
          Length = 264

 Score =  355 bits (911), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL
Sbjct: 1   MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV+YL  + VSIWDEWAD++G+LGP+YG QWRSWP   G+ IDQIS ++  ++
Sbjct: 61  WFLKGETNVAYLRENKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR P  LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRRPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L +Y PH  I A V+V
Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264


>gi|327538952|gb|EGF25590.1| thymidylate synthase [Rhodopirellula baltica WH47]
          Length = 301

 Score =  355 bits (911), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL  V+  G DR DRTGVGTRS FG QMRFDL++GFPLLTTKK+H +S++HELL
Sbjct: 38  MQGYLQLLDEVLHDGIDRDDRTGVGTRSLFGRQMRFDLAEGFPLLTTKKLHIRSILHELL 97

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  + VSIWDEWAD+ G+LGP+YG QWRSW   +G+ +DQI+ +   +R
Sbjct: 98  WFLRGDTNIGYLKENKVSIWDEWADEAGDLGPVYGHQWRSWEGANGDTVDQIAWVENEIR 157

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + KMALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 158 TNPRSRRLVVSAWNVADVPKMALPPCHLLFQFYVSGGRLSCQLYQRSADLFLGVPFNIAS 217

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y++LT M+A V G + GEF+HTLGDVHLY+NHF+QA  QLSR+PR LP   I  ++  + 
Sbjct: 218 YAMLTSMMAHVTGLKPGEFVHTLGDVHLYSNHFDQAREQLSRTPRPLPTFHIKRDVASVT 277

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++DF L +Y+PH  I A V+V
Sbjct: 278 DFQFDDFELTNYDPHPHIKAPVAV 301


>gi|315498745|ref|YP_004087549.1| thymidylate synthase [Asticcacaulis excentricus CB 48]
 gi|315416757|gb|ADU13398.1| thymidylate synthase [Asticcacaulis excentricus CB 48]
          Length = 268

 Score =  355 bits (910), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 159/263 (60%), Positives = 205/263 (77%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLDL+R ++  G  R DRTG GT+  FG Q+RFDL++GFPLLTTKKVH+KSV  ELLW
Sbjct: 7   YQYLDLVRDIMANGVTRMDRTGTGTKGVFGRQIRFDLAEGFPLLTTKKVHFKSVAVELLW 66

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGD+N+ YL  HGVSIWDEWAD++G+LGP+YG QWRSW   DG VIDQ+S ++++L+ 
Sbjct: 67  FLRGDTNIKYLKDHGVSIWDEWADENGDLGPVYGKQWRSWAAPDGRVIDQMSQLIENLKT 126

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P+SRRH++SAWN + ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 127 NPHSRRHVISAWNPSEVEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASY 186

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A  +G + G+F+H+ GDVHLY NH EQA  QLSR P + P + +     +L +
Sbjct: 187 ALLTHMVAQAVGLEVGDFVHSFGDVHLYLNHVEQAQTQLSRDPMSFPTLKLAAK-TNLFA 245

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           F Y D  L  Y+ H A+ A V+V
Sbjct: 246 FDYADIELIGYQSHGALKAPVAV 268


>gi|32477613|ref|NP_870607.1| thymidylate synthase [Rhodopirellula baltica SH 1]
 gi|62901353|sp|Q7UID0|TYSY_RHOBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|32448167|emb|CAD77684.1| thymidylate synthase [Rhodopirellula baltica SH 1]
          Length = 264

 Score =  355 bits (910), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL  V+  G DR DRTGVGTRS FG QMRFDL++GFPLLTTKK+H +S++HELL
Sbjct: 1   MQGYLQLLDEVLHDGIDRDDRTGVGTRSLFGRQMRFDLAEGFPLLTTKKLHIRSILHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  + VSIWDEWAD+ G+LGP+YG QWRSW   +G+ +DQI+ +   +R
Sbjct: 61  WFLRGDTNIGYLKENKVSIWDEWADEAGDLGPVYGHQWRSWEGANGDTVDQIAWVENEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + KMALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPRSRRLVVSAWNVADVPKMALPPCHLLFQFYVSGGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y++LT M+A V G + GEF+HTLGDVHLY+NHF+QA  QLSR+PR LP   I  ++  + 
Sbjct: 181 YAMLTSMMAHVTGLKPGEFVHTLGDVHLYSNHFDQAREQLSRTPRPLPTFHIKRDVASVT 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++DF L +Y+PH  I A V+V
Sbjct: 241 DFQFDDFELTNYDPHPHIKAPVAV 264


>gi|332140100|ref|YP_004425838.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype']
 gi|332143102|ref|YP_004428840.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550122|gb|AEA96840.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327553124|gb|AEA99842.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 277

 Score =  355 bits (910), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 163/277 (58%), Positives = 205/277 (74%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL L+RHV   G  ++DRTG GT S FGYQMRF+L +GFPL+TTKK H KS++HELL
Sbjct: 1   MKEYLALMRHVRDTGVKKKDRTGTGTLSVFGYQMRFNLQEGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  HGV IWDEWA  +GELGP+YG QWRSW   DG  +DQI+ +V+ ++
Sbjct: 61  WFLKGETNIAYLKEHGVKIWDEWATDEGELGPVYGHQWRSWDRGDGTSVDQIAEVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVS WN A++              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 121 NNPDSRRLIVSGWNPAVLPDTNYSPKENAAMGKQALPPCHTLFQFYVLDGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GD+FLGIPFNIASY+LLTMM+A V   + G+FIHTLGD HLY+NH EQ +LQLSR P   
Sbjct: 181 GDIFLGIPFNIASYALLTMMIAQVCDLEPGDFIHTLGDAHLYSNHLEQVELQLSREPFER 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP + D+  F ++DFTL++Y+ H  I A V++
Sbjct: 241 PTMEINPEVKDIFGFTFDDFTLKNYQSHPHIKAPVAI 277


>gi|54295693|ref|YP_128108.1| thymidylate synthase [Legionella pneumophila str. Lens]
 gi|62901230|sp|Q5WSU5|TYSY_LEGPL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|53755525|emb|CAH17024.1| Thymidylate synthase [Legionella pneumophila str. Lens]
          Length = 264

 Score =  355 bits (910), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 164/264 (62%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL
Sbjct: 1   MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAKGFPLVTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQ+S +VQ ++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGGTIDQLSDVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A        EFI T GD HLY NH EQA  QL+R P  LP + I      L 
Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQTQLTREPLPLPSLAIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +Y+ H AI A ++V
Sbjct: 241 DYAYEDFEFVNYQSHPAIKAPIAV 264


>gi|52843063|ref|YP_096862.1| thymidylate synthase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|62901244|sp|Q5ZRL3|TYSY_LEGPH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|52630174|gb|AAU28915.1| thymidylate synthase (TS) [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 264

 Score =  354 bits (909), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H+++ G ++ DRTG GT S FGYQMRFDL++GFPL+TTKK+H +S+VHELL
Sbjct: 1   MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAQGFPLVTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQ+S +VQ ++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGRTIDQLSEVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A        EFI T GD HLY NH EQA +QL+R P  LP + I      L 
Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLAIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +Y+ H AI A ++V
Sbjct: 241 DYAYEDFEFLNYQSHPAIKAPIAV 264


>gi|217974282|ref|YP_002359033.1| thymidylate synthase [Shewanella baltica OS223]
 gi|304409350|ref|ZP_07390970.1| thymidylate synthase [Shewanella baltica OS183]
 gi|307303708|ref|ZP_07583461.1| thymidylate synthase [Shewanella baltica BA175]
 gi|254790249|sp|B8EBR5|TYSY_SHEB2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|217499417|gb|ACK47610.1| Thymidylate synthase [Shewanella baltica OS223]
 gi|304351868|gb|EFM16266.1| thymidylate synthase [Shewanella baltica OS183]
 gi|306912606|gb|EFN43029.1| thymidylate synthase [Shewanella baltica BA175]
          Length = 264

 Score =  354 bits (909), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL
Sbjct: 1   MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV+YL  + VSIWDEWAD +G+LGP+YG QWRSWP   G+ IDQIS ++  ++
Sbjct: 61  WFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR P  LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L +Y PH  I A V+V
Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264


>gi|197104285|ref|YP_002129662.1| thymidylate synthase [Phenylobacterium zucineum HLK1]
 gi|196477705|gb|ACG77233.1| thymidylate synthase [Phenylobacterium zucineum HLK1]
          Length = 286

 Score =  354 bits (909), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 169/267 (63%), Positives = 203/267 (76%), Gaps = 6/267 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LL  +++ G+ R DRTG GT   FG QMRFDLS+GFPLLTTKK+H KS++ ELLWF
Sbjct: 21  QYLNLLADILETGAARGDRTGTGTLGVFGRQMRFDLSQGFPLLTTKKLHRKSIILELLWF 80

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD+NV +L   GVSIWDEWAD DGELGP+YG QWRSW   DG VIDQIS +V SL+ +
Sbjct: 81  LRGDTNVRWLQERGVSIWDEWADADGELGPVYGKQWRSWAAPDGRVIDQISGVVNSLKTN 140

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVFLGIPFN 177
           P SRRHIVSAWN A ++ MALPPCHCLFQF+V        +LSCQLYQRS DVFLG+PFN
Sbjct: 141 PESRRHIVSAWNPAEVEDMALPPCHCLFQFFVAPDRDGVKRLSCQLYQRSADVFLGVPFN 200

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           IASY+LLT+M+A V G+  GEF+HTLGD HLY NH EQA +QL+R P  LP M +  +  
Sbjct: 201 IASYALLTLMMAKVTGYAPGEFVHTLGDAHLYLNHVEQARIQLAREPMPLPVMHVA-DRD 259

Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264
           DL +F YEDF L  Y+ H +I A ++V
Sbjct: 260 DLFAFAYEDFKLEGYQAHPSIPAPIAV 286


>gi|86131361|ref|ZP_01049959.1| Thymidylate synthase [Dokdonia donghaensis MED134]
 gi|85817806|gb|EAQ38974.1| Thymidylate synthase [Dokdonia donghaensis MED134]
          Length = 274

 Score =  354 bits (909), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 160/277 (57%), Positives = 210/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV+  G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLMKHVLAEGNFKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LGP+YG QWR+W   +G+ IDQI  IV++L+
Sbjct: 61  WFLQGDTNVKYLQENGVRIWNEWADENGDLGPVYGYQWRNW---NGDEIDQIKDIVETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 KNPNSRRMLVSAWNPSVMPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR  RTL
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQVELQLSREIRTL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + INP + D+  F ++DFTL +Y PH  I   V+V
Sbjct: 238 PTLKINPEVKDIFGFTFDDFTLENYNPHPHIKGAVAV 274


>gi|255038746|ref|YP_003089367.1| thymidylate synthase [Dyadobacter fermentans DSM 18053]
 gi|254951502|gb|ACT96202.1| thymidylate synthase [Dyadobacter fermentans DSM 18053]
          Length = 273

 Score =  354 bits (909), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 167/273 (61%), Positives = 201/273 (73%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLRH++K G  + DRTG GT S FGYQMRFDL KGFPL+TTKKVH KS++HELL
Sbjct: 1   MQQYHDLLRHILKEGVRKTDRTGTGTISVFGYQMRFDLKKGFPLVTTKKVHTKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  H VSIWDEWAD++G+LGP+YG QWRSW   DG  +DQ+  +++ L+
Sbjct: 61  WFLQGDTNIGYLKEHNVSIWDEWADENGDLGPVYGKQWRSWAGPDGKSVDQLQEVLKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---------DNGKLSCQLYQRSGDVF 171
             P SRR IVSAWN A + +M L PCH LFQFYV          NGKLSCQLYQRS DVF
Sbjct: 121 NSPDSRRIIVSAWNPAELPQMKLHPCHALFQFYVAPPDTGAGETNGKLSCQLYQRSADVF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A       G+F+ T GD H+Y NH EQ + QLSR PR LPQMI
Sbjct: 181 LGVPFNIASYALLTMMIARECDLDLGDFVWTGGDTHIYLNHLEQVETQLSREPRALPQMI 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +NP + ++L FRYEDF L +Y P   I A V+V
Sbjct: 241 LNPGVKNVLDFRYEDFELVNYNPWPGIKAPVAV 273


>gi|326330104|ref|ZP_08196416.1| thymidylate synthase [Nocardioidaceae bacterium Broad-1]
 gi|325952114|gb|EGD44142.1| thymidylate synthase [Nocardioidaceae bacterium Broad-1]
          Length = 264

 Score =  354 bits (908), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  ++  G ++ DRTG GT S FG+Q R+DL++GFPLLTTKK+H +SV  ELL
Sbjct: 1   MQSYLDLLTRILDEGVEKSDRTGTGTISVFGHQTRYDLAEGFPLLTTKKIHTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L   G++IWDEWAD++G+LGP+YG QWRSWP  DG  +DQI+ I+  ++
Sbjct: 61  WFLRGDTNVRWLQERGITIWDEWADENGDLGPVYGYQWRSWPTPDGRHVDQIARIIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRRHIV+AWN A ID MALPPCH L QFYV +GKLS QLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRHIVTAWNPADIDDMALPPCHTLCQFYVADGKLSLQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G Q GEF+HTLGD HLY+NH EQA LQL+R+PR LP + +NP++ D+ 
Sbjct: 181 YALLTHMVAHVTGLQPGEFVHTLGDAHLYSNHVEQARLQLTRTPRPLPTLRLNPDVKDID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D T+  Y+P   I A V+V
Sbjct: 241 AFDLDDITVEGYDPAPGIKAPVAV 264


>gi|152999765|ref|YP_001365446.1| thymidylate synthase [Shewanella baltica OS185]
 gi|160874384|ref|YP_001553700.1| thymidylate synthase [Shewanella baltica OS195]
 gi|166231731|sp|A6WKP4|TYSY_SHEB8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036943|sp|A9L5M3|TYSY_SHEB9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|151364383|gb|ABS07383.1| Thymidylate synthase [Shewanella baltica OS185]
 gi|160859906|gb|ABX48440.1| Thymidylate synthase [Shewanella baltica OS195]
 gi|315266619|gb|ADT93472.1| thymidylate synthase [Shewanella baltica OS678]
          Length = 264

 Score =  354 bits (908), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL
Sbjct: 1   MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV+YL  + VSIWDEWAD +G+LGP+YG QWRSWP   G+ IDQIS ++  ++
Sbjct: 61  WFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR P  LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRRPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L +Y PH  I A V+V
Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264


>gi|254419110|ref|ZP_05032834.1| thymidylate synthase [Brevundimonas sp. BAL3]
 gi|196185287|gb|EDX80263.1| thymidylate synthase [Brevundimonas sp. BAL3]
          Length = 307

 Score =  354 bits (908), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 166/262 (63%), Positives = 199/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LLR ++  G  R DRTG GT   FG QMRFDLSKGFP+LTTKK+H +S++ ELLWF
Sbjct: 47  QYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPVLTTKKLHLRSIIVELLWF 106

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG++N+ +L  +GV IWDEWAD +GELGP+YG QWRSW   DG  IDQI  +V  L+ +
Sbjct: 107 LRGETNIGWLKDNGVRIWDEWADAEGELGPVYGKQWRSWTAPDGRSIDQIEKLVHGLKTN 166

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRRHIV+AWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 167 PNSRRHIVTAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 226

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT+MLA V+G + G+F+HT GD HLY NH EQA+LQL+R P  LP M I P   DL +F
Sbjct: 227 LLTLMLAQVVGLEPGDFVHTFGDAHLYLNHLEQAELQLTREPLPLPVMHIAPK-TDLFAF 285

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
              DFTL  YE    I A V+V
Sbjct: 286 ELSDFTLEGYEAWPHIKAAVAV 307


>gi|46203405|ref|ZP_00208952.1| COG0207: Thymidylate synthase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 290

 Score =  354 bits (908), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 160/263 (60%), Positives = 200/263 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDL++GFPL+TTK++H +S++HELL
Sbjct: 18  MRAYHDLLDRILTEGLRKDDRTGTGTLSVFGHQMRFDLAEGFPLVTTKQLHLRSIIHELL 77

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD DG LGP+YG QWRSW    G  +DQI+ ++  + 
Sbjct: 78  WFLQGDTNIAYLKENGVTIWDEWADADGNLGPVYGKQWRSWEKPSGGTVDQIAWVLGEIA 137

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 138 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 197

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G   G+F+HTLGD HLY NH EQA LQLSR PR LP++ +NP +  L 
Sbjct: 198 YALLTAMMAQVTGLAPGDFVHTLGDAHLYVNHLEQARLQLSREPRALPRLRLNPEVRSLF 257

Query: 241 SFRYEDFTLRSYEPHAAILAKVS 263
            FR+ED  +  Y+PH AI A V 
Sbjct: 258 DFRFEDIAIEGYDPHPAIKAPVG 280


>gi|304382975|ref|ZP_07365456.1| thymidylate synthase [Prevotella marshii DSM 16973]
 gi|304335894|gb|EFM02143.1| thymidylate synthase [Prevotella marshii DSM 16973]
          Length = 282

 Score =  353 bits (907), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G+ + DRTG GT S FG+QMRF +  GFPLLTTK++H KS+++ELL
Sbjct: 19  MKQYLDLLHLLLTEGTKKGDRTGTGTLSVFGHQMRFRMEDGFPLLTTKRLHLKSIIYELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGVSIWDEWAD +G+LGP+YG QWRSW    G  IDQI  ++  LR
Sbjct: 79  WFLKGDTNVRYLQEHGVSIWDEWADANGDLGPVYGHQWRSWAGPKGETIDQIQGVLNQLR 138

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D MALPPCHCLFQFYV  G+LS QLYQRS D FLG+PFNIAS
Sbjct: 139 QNPDSRRMIVSAWNPAEVDSMALPPCHCLFQFYVAEGRLSLQLYQRSADTFLGVPFNIAS 198

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL +M+A V G + G+F++T GD HLY NH EQA LQL+R+PR LP M +NP+I DL 
Sbjct: 199 YALLLLMMAQVTGLRAGDFVYTTGDTHLYLNHTEQARLQLTRTPRPLPTMKLNPDIADLF 258

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFRYEDF L +Y+P+  I A VSV
Sbjct: 259 SFRYEDFQLSNYDPYDHIKADVSV 282


>gi|163786432|ref|ZP_02180880.1| Thymidylate synthase [Flavobacteriales bacterium ALC-1]
 gi|159878292|gb|EDP72348.1| Thymidylate synthase [Flavobacteriales bacterium ALC-1]
          Length = 274

 Score =  353 bits (907), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 159/277 (57%), Positives = 207/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV+  G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLVKHVLAEGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N  YL  +GV IW+EWAD +G+LGP+YG QWR+W   +   IDQI  ++ +L+
Sbjct: 61  WFLKGDTNTKYLTENGVRIWNEWADDNGDLGPVYGHQWRNWASEE---IDQIKEVITTLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L T M+A V GF+ G+FIHT GD H+YNNH EQ +LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALFTKMMAQVCGFEAGDFIHTFGDAHIYNNHMEQLELQLSRVPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+MI+NP + D+  F++EDFTL  Y PH  I   V+V
Sbjct: 238 PKMILNPEVKDIFDFKFEDFTLVDYNPHPHIKGVVAV 274


>gi|329848571|ref|ZP_08263599.1| thymidylate synthase [Asticcacaulis biprosthecum C19]
 gi|328843634|gb|EGF93203.1| thymidylate synthase [Asticcacaulis biprosthecum C19]
          Length = 288

 Score =  353 bits (907), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 160/263 (60%), Positives = 203/263 (77%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+LLR  ++ G  R DRTG GT   FG Q+RFDLS+GFPLLTTKKVH+KSV  ELLW
Sbjct: 27  YQYLNLLRDCLENGVRRDDRTGTGTYGLFGRQIRFDLSQGFPLLTTKKVHFKSVAVELLW 86

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGD+NV YL  HGV+IWDEWAD DG LGP+YG QWRSW   DG VIDQ++ +V++L+ 
Sbjct: 87  FLRGDTNVKYLQDHGVTIWDEWADDDGNLGPVYGKQWRSWAAPDGRVIDQMAQLVENLKT 146

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRRH++SAWN A ++ MALPPCHCLFQF+V +G+LSCQLYQRS D+FLG+PFNIASY
Sbjct: 147 NPNSRRHVISAWNPAEVEDMALPPCHCLFQFFVADGRLSCQLYQRSADIFLGVPFNIASY 206

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A  +G + G+F+H+ GDVHLY+NH EQA  Q+ R+P   P + + P   DL  
Sbjct: 207 ALLTHMVAQAVGLKPGDFVHSFGDVHLYSNHIEQAKTQMERTPFAFPVLELAPK-TDLFG 265

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           F Y D T+ +Y+ H A+ A V+V
Sbjct: 266 FDYADLTIANYQSHGALKAPVAV 288


>gi|332883236|gb|EGK03519.1| thymidylate synthase [Dysgonomonas mossii DSM 22836]
          Length = 264

 Score =  353 bits (907), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+ V+  G+ + DRTG GT S FG+Q R++L++GFP+LTTKK+H KS+++ELL
Sbjct: 1   MKQYHDLLKRVLAEGTFKEDRTGTGTISVFGHQSRYNLAEGFPVLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  HGV IW+EWAD++G+LG IYG QWRSWPDY+G  +DQI++ V++++
Sbjct: 61  WFLAGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGYVDQITNAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +  M LPPCH  FQFYV +GKLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVADLPNMNLPPCHAFFQFYVADGKLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q GEF+HTLGD H+Y NH +Q  LQL+R  R LPQMIINP +  + 
Sbjct: 181 YALLLKMMAQVTGLQEGEFVHTLGDAHIYTNHLDQVKLQLTRDFRPLPQMIINPEVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+PH  I  +V+V
Sbjct: 241 DFKYEDFQLEGYDPHPHIKGEVAV 264


>gi|309389314|gb|ADO77194.1| thymidylate synthase [Halanaerobium praevalens DSM 2228]
          Length = 263

 Score =  353 bits (906), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 204/264 (77%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL + +H++  G DR DRTG GTRS FGYQ+RF+L KGFPLLTTKK++WK++VHELL
Sbjct: 1   MKKYLKMCQHILDNGVDREDRTGTGTRSVFGYQLRFNLKKGFPLLTTKKIYWKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ + V IWDEWAD+ G+LG IYG QWR+W   DG  IDQIS +++ ++
Sbjct: 61  WFLKGDTNIKYLNDNNVHIWDEWADEHGDLGHIYGHQWRNWEGKDG-TIDQISEVIEQIK 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWNV  ++ MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 120 TNPNSRRLLVNAWNVGDLENMALPPCHLLFQFYVADGKLSCQLYQRSCDTFLGVPFNIAS 179

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A V+G + G+FI + GDVH+Y+NHFEQ   QL R PR L Q+ +NP I +L 
Sbjct: 180 YSLLTHMIAQVVGLEVGDFIWSGGDVHIYHNHFEQIKKQLKRKPRDLAQIKLNPKINNLF 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YED  L +Y PH  I  KVSV
Sbjct: 240 DFKYEDIKLLNYNPHPLIKGKVSV 263


>gi|313203340|ref|YP_004041997.1| thymidylate synthase [Paludibacter propionicigenes WB4]
 gi|312442656|gb|ADQ79012.1| thymidylate synthase [Paludibacter propionicigenes WB4]
          Length = 264

 Score =  353 bits (906), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+DLL  V+  G  + DRTG GT S FG+QMRF++  GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYIDLLNRVLTEGVHKEDRTGTGTISVFGHQMRFNMEDGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IW+EWAD+ G LG IYG QWRSWPDY+G  IDQI+ +V +++
Sbjct: 61  WFLNGDTNIKYLTDNGVRIWNEWADEQGNLGHIYGYQWRSWPDYNGGHIDQITEVVNAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I  M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRIIVSAWNVADIPNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQLSR PR LP M INP+I D+ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHMEQVKLQLSREPRPLPTMKINPDIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF + DF L  Y+PH  I   V+V
Sbjct: 241 SFSFSDFELIDYDPHPHIKGVVAV 264


>gi|88858168|ref|ZP_01132810.1| thymidylate synthase [Pseudoalteromonas tunicata D2]
 gi|88819785|gb|EAR29598.1| thymidylate synthase [Pseudoalteromonas tunicata D2]
          Length = 277

 Score =  353 bits (905), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 161/277 (58%), Positives = 203/277 (73%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+RHV + G  + DRTG GT S FGYQMRF+LS+GFPL+TTKK H KS++HELL
Sbjct: 1   MKQYLELMRHVKEHGVKKEDRTGTGTISVFGYQMRFNLSEGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWD WA ++GELGP+YG QWRSW   DG VIDQI+ +++ ++
Sbjct: 61  WFLAGDTNIKYLTDNGVKIWDGWATEEGELGPVYGAQWRSWQGLDGQVIDQIAELIKQIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN A++              K ALPPCH LFQFYV  GKLSCQLYQRS
Sbjct: 121 TNPDSRRLIVSAWNPAVLPDTQFSPSENAAMGKQALPPCHTLFQFYVLEGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+ LG+PFNIASY+LLTMM+A V   + G+F+HT GD HLY+NH EQ D QLSR+P   
Sbjct: 181 ADILLGVPFNIASYALLTMMIAQVCDLKVGDFVHTFGDAHLYSNHLEQVDEQLSRTPFPK 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP + D+ +F++EDF L +Y+ H  I A V++
Sbjct: 241 PTMKINPAVKDIFAFKFEDFELENYQAHPHIKAPVAI 277


>gi|323137414|ref|ZP_08072492.1| thymidylate synthase [Methylocystis sp. ATCC 49242]
 gi|322397401|gb|EFX99924.1| thymidylate synthase [Methylocystis sp. ATCC 49242]
          Length = 268

 Score =  353 bits (905), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 159/268 (59%), Positives = 205/268 (76%), Gaps = 4/268 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +++ G  + DRTG GT S FG+QMRFDL++GFPL+TTK+VH KS++HELL
Sbjct: 1   MRQYLDLLDKILREGVRKEDRTGTGTLSIFGHQMRFDLAQGFPLVTTKRVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  +GV+IWDEWAD+ G+LGP+YG QWR+WP   G  IDQIS +V+ ++
Sbjct: 61  WFLRGDTNIAYLRENGVTIWDEWADESGDLGPVYGRQWRAWPTPGGETIDQISWLVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPF 176
             P+SRR IVSAWNVA ID+MAL PCHCLFQF+V       +LSCQLYQRS DVFLG+PF
Sbjct: 121 KSPFSRRLIVSAWNVAEIDRMALAPCHCLFQFHVAEIDGQKRLSCQLYQRSADVFLGVPF 180

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           N+ASY+LLT M+A V G   G+F+H+ GD HLY NH EQA  QL+R P+ LP++ +NP+I
Sbjct: 181 NVASYALLTQMVAQVTGCVPGDFVHSFGDAHLYLNHLEQARTQLAREPKPLPRLRLNPSI 240

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  F+YED  +  YE   A+ A ++V
Sbjct: 241 TSLFDFKYEDIAIEGYESWPALAAPIAV 268


>gi|114570577|ref|YP_757257.1| thymidylate synthase [Maricaulis maris MCS10]
 gi|114341039|gb|ABI66319.1| thymidylate synthase [Maricaulis maris MCS10]
          Length = 285

 Score =  353 bits (905), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 160/263 (60%), Positives = 200/263 (76%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL LLR +++ G+++ DRTGVGT S FG Q+R DLSKGFPLLTTKKVH+KS+  ELLW
Sbjct: 23  NAYLALLRDILENGAEQADRTGVGTMSVFGRQLRCDLSKGFPLLTTKKVHFKSIAIELLW 82

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRG++NV +L   GV IWDEWAD++G+LGP+YG QWR W   DG  IDQ+S+I++ +R 
Sbjct: 83  FLRGETNVRWLQERGVKIWDEWADENGDLGPVYGKQWRRWEGPDGTEIDQLSNILEQIRN 142

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR IVS WN A +  MALPPCH L+QF V  GKLSCQLYQRS D+FLG+PFNIASY
Sbjct: 143 NPASRRLIVSGWNPADVPNMALPPCHTLYQFNVAGGKLSCQLYQRSADMFLGVPFNIASY 202

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A V G + GE+IHT GD H+Y+NH +Q   QLSR+PR LPQ+ +NP+  DL  
Sbjct: 203 ALLTAMVAQVCGLEPGEYIHTFGDAHIYSNHMDQVREQLSRAPRALPQLKLNPDATDLFG 262

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           F YED  L  Y+PH  I A V+V
Sbjct: 263 FEYEDIALEGYDPHPRITAPVAV 285


>gi|241759128|ref|ZP_04757237.1| thymidylate synthase [Neisseria flavescens SK114]
 gi|241320624|gb|EER56894.1| thymidylate synthase [Neisseria flavescens SK114]
          Length = 235

 Score =  353 bits (905), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 160/230 (69%), Positives = 191/230 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV+  G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
           Y+LLTMM+A V G   GEFIHT GD HLY+NH EQA LQLSR  R+LP M
Sbjct: 181 YALLTMMMAQVCGLGAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRSLPAM 230


>gi|307611741|emb|CBX01446.1| thymidylate synthase [Legionella pneumophila 130b]
          Length = 264

 Score =  353 bits (905), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL
Sbjct: 1   MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAKGFPLVTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQ+S +VQ ++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGRTIDQLSDVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +D+MAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGELDQMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A        EFI T GD HLY NH EQA  QL+R P  LP + I      L 
Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQTQLTREPLPLPSLAIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +Y+ H AI A ++V
Sbjct: 241 EYVYEDFEFVNYQSHPAIKAPIAV 264


>gi|332519885|ref|ZP_08396349.1| thymidylate synthase [Lacinutrix algicola 5H-3-7-4]
 gi|332044444|gb|EGI80638.1| thymidylate synthase [Lacinutrix algicola 5H-3-7-4]
          Length = 274

 Score =  352 bits (904), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 154/277 (55%), Positives = 211/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHELVKHVLENGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV IW+ WAD+ G+LGP+YG QWR+W   + + +DQI+ ++++L+
Sbjct: 61  WFLKGDTNINYLTENGVKIWNSWADEKGDLGPVYGHQWRNW---NSDEVDQITEVIETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G+Q GEFIHT GD H+YNNH EQ +LQ++R  R L
Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCGYQAGEFIHTFGDAHIYNNHVEQLELQMTRDCRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP + D+  F++EDFTL  Y PH  I   V+V
Sbjct: 238 PKMKLNPEVKDIFEFKFEDFTLEDYNPHPHIKGAVAV 274


>gi|254784598|ref|YP_003072026.1| thymidylate synthase [Teredinibacter turnerae T7901]
 gi|259550813|sp|C5BMA3|TYSY_TERTT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|237686344|gb|ACR13608.1| thymidylate synthase [Teredinibacter turnerae T7901]
          Length = 277

 Score =  352 bits (904), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 162/277 (58%), Positives = 201/277 (72%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+RHV   G  + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL
Sbjct: 1   MKQYLELMRHVRDNGVRKEDRTGTGTVSVFGYQMRFDLSQGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N++YL+ +GV IWD WA + G+LGPIYG QWRSWP  +G  +DQIS +++ ++
Sbjct: 61  WFLNGETNIAYLNNNGVKIWDAWATESGDLGPIYGAQWRSWPAQNGETLDQISQLIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR I+SAWN AL+              KMALPPCH LFQFYV  G+LSCQLYQRS
Sbjct: 121 HKPDSRRLIISAWNPALLPDESISPQDNVRNGKMALPPCHTLFQFYVLEGRLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G   G+F+HT GD HLY NH EQ D QL R P  L
Sbjct: 181 ADIFLGVPFNIASYALLTMMIAQVTGLAPGDFVHTFGDAHLYLNHLEQVDTQLQRQPLPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP + D+  F ++DF L++Y+ H  I A +SV
Sbjct: 241 PTMAINPAVKDIFGFCFDDFELQNYQAHPHIAAPISV 277


>gi|196231360|ref|ZP_03130219.1| Thymidylate synthase [Chthoniobacter flavus Ellin428]
 gi|196224696|gb|EDY19207.1| Thymidylate synthase [Chthoniobacter flavus Ellin428]
          Length = 264

 Score =  352 bits (904), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V+  G  + DRTG GT S FG Q RFDLS GFPLLTTKK+H KS++HELL
Sbjct: 1   MRAYLDLLTLVLDHGRFKPDRTGTGTYSVFGAQARFDLSSGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL ++GV+IW+EWAD+DG LG +YG QWR W   DG  IDQI +++  ++
Sbjct: 61  WFLAGDTNVRYLQQNGVTIWNEWADEDGNLGRVYGAQWRDWITADGRHIDQIDNVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   +D MALPPCH +FQF+V +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPGEVDTMALPPCHAMFQFFVLDGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q G+F+HT GD+HLY NH +QA  QL+R+PR LP M ++P I D+ 
Sbjct: 181 YALLTMMVAQVTGLQPGDFVHTFGDLHLYANHLDQAREQLTRTPRPLPTMTLSPAIRDIH 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH AI A ++V
Sbjct: 241 GFRYEDFVLSGYDPHPAIKAPIAV 264


>gi|300692074|ref|YP_003753069.1| thymidylate synthetase [Ralstonia solanacearum PSI07]
 gi|299079134|emb|CBJ51802.1| thymidylate synthetase [Ralstonia solanacearum PSI07]
          Length = 264

 Score =  352 bits (903), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHSKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 61  WFLQGATNVRWLQENGVTIWDEWADADGELGPIYGYQWRSWPTPTGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD HLYNNHFEQ + QL+R P  LP++ I      + 
Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLAREPLPLPKLHIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF +  Y+ HAAI A V+V
Sbjct: 241 DYQYEDFEIVGYQSHAAIKAPVAV 264


>gi|15609901|ref|NP_217280.1| thymidylate synthase [Mycobacterium tuberculosis H37Rv]
 gi|31793939|ref|NP_856432.1| thymidylate synthase [Mycobacterium bovis AF2122/97]
 gi|121638643|ref|YP_978867.1| thymidylate synthase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148662606|ref|YP_001284129.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra]
 gi|167968591|ref|ZP_02550868.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra]
 gi|215428196|ref|ZP_03426115.1| thymidylate synthase [Mycobacterium tuberculosis T92]
 gi|219558774|ref|ZP_03537850.1| thymidylate synthase [Mycobacterium tuberculosis T17]
 gi|224991135|ref|YP_002645824.1| thymidylate synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|254232862|ref|ZP_04926189.1| thymidylate synthase thyA [Mycobacterium tuberculosis C]
 gi|254365415|ref|ZP_04981460.1| thymidylate synthase thyA [Mycobacterium tuberculosis str. Haarlem]
 gi|289444308|ref|ZP_06434052.1| thymidylate synthase [Mycobacterium tuberculosis T46]
 gi|289448420|ref|ZP_06438164.1| thymidylate synthase thyA [Mycobacterium tuberculosis CPHL_A]
 gi|289570943|ref|ZP_06451170.1| thymidylate synthase thyA [Mycobacterium tuberculosis T17]
 gi|289575461|ref|ZP_06455688.1| thymidylate synthase thyA [Mycobacterium tuberculosis K85]
 gi|289746567|ref|ZP_06505945.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987]
 gi|289751421|ref|ZP_06510799.1| thymidylate synthase thyA [Mycobacterium tuberculosis T92]
 gi|289754869|ref|ZP_06514247.1| thymidylate synthase [Mycobacterium tuberculosis EAS054]
 gi|289758891|ref|ZP_06518269.1| thymidylate synthase [Mycobacterium tuberculosis T85]
 gi|298526231|ref|ZP_07013640.1| thymidylate synthase thyA [Mycobacterium tuberculosis 94_M4241A]
 gi|308377122|ref|ZP_07441195.2| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu008]
 gi|308405964|ref|ZP_07494573.2| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu012]
 gi|54039796|sp|P67045|TYSY_MYCBO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54042282|sp|P67044|TYSY_MYCTU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231712|sp|A1KMA6|TYSY_MYCBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231716|sp|A5U6B7|TYSY_MYCTA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790245|sp|C1AFM7|TYSY_MYCBT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|2624286|emb|CAA15560.1| PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|31619533|emb|CAD94971.1| PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) [Mycobacterium
           bovis AF2122/97]
 gi|121494291|emb|CAL72769.1| Probable thymidylate synthase thyA [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601921|gb|EAY60931.1| thymidylate synthase thyA [Mycobacterium tuberculosis C]
 gi|134150928|gb|EBA42973.1| thymidylate synthase thyA [Mycobacterium tuberculosis str. Haarlem]
 gi|148506758|gb|ABQ74567.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra]
 gi|224774250|dbj|BAH27056.1| thymidylate synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289417227|gb|EFD14467.1| thymidylate synthase [Mycobacterium tuberculosis T46]
 gi|289421378|gb|EFD18579.1| thymidylate synthase thyA [Mycobacterium tuberculosis CPHL_A]
 gi|289539892|gb|EFD44470.1| thymidylate synthase thyA [Mycobacterium tuberculosis K85]
 gi|289544697|gb|EFD48345.1| thymidylate synthase thyA [Mycobacterium tuberculosis T17]
 gi|289687095|gb|EFD54583.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987]
 gi|289692008|gb|EFD59437.1| thymidylate synthase thyA [Mycobacterium tuberculosis T92]
 gi|289695456|gb|EFD62885.1| thymidylate synthase [Mycobacterium tuberculosis EAS054]
 gi|289714455|gb|EFD78467.1| thymidylate synthase [Mycobacterium tuberculosis T85]
 gi|298496025|gb|EFI31319.1| thymidylate synthase thyA [Mycobacterium tuberculosis 94_M4241A]
 gi|308348858|gb|EFP37709.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu008]
 gi|308364984|gb|EFP53835.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu012]
 gi|326904379|gb|EGE51312.1| thymidylate synthase thyA [Mycobacterium tuberculosis W-148]
          Length = 263

 Score =  352 bits (903), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 167/264 (63%), Positives = 202/264 (76%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELL
Sbjct: 1   MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSN+ +LH HGV+IWDEWA   GELGPIYGVQWRSWP   G  IDQIS+ +  LR
Sbjct: 61  WFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  I++MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A+  G   GEFI T GD H+Y+NH EQ  LQLSR PR  P++++  +   + 
Sbjct: 181 YALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIF 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YED  +++Y+PH AI A V+V
Sbjct: 240 EYTYEDIVVKNYDPHPAIKAPVAV 263


>gi|227327704|ref|ZP_03831728.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
          Length = 264

 Score =  352 bits (903), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YLH + VSIWDEWAD++G LGP+YG QWRSW   DG  IDQ+ +++  LR
Sbjct: 61  WFLNGDTNVAYLHENKVSIWDEWADENGNLGPVYGKQWRSWGAADGREIDQLKNVLTQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ +LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTNLQLSREPRALPKLVIKRRPDTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|256823628|ref|YP_003147591.1| thymidylate synthase [Kangiella koreensis DSM 16069]
 gi|256797167|gb|ACV27823.1| thymidylate synthase [Kangiella koreensis DSM 16069]
          Length = 264

 Score =  352 bits (903), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++RHVI  G D+ DRTG GTRS FGYQMRF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 1   MKQYLDMMRHVINNGEDKGDRTGTGTRSVFGYQMRFNLQDGFPLVTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWD+WAD++G+LGP+YG QWRSW   DG  IDQISS++  ++
Sbjct: 61  WFLNGDTNIKYLKDNGVSIWDDWADENGDLGPVYGEQWRSWKKPDGTTIDQISSVLNQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V A+N  + D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRLMVVAYNPGVADEMALPPCHSLFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + GEFI T GD HLY+NHFEQA+ QLSR P +LP + I      L 
Sbjct: 181 YALLTHMIAQQAGLEVGEFIWTGGDTHLYSNHFEQANEQLSREPLSLPALKIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  YE H  I A V+V
Sbjct: 241 DYQFEDFEIVGYESHPHIKAPVAV 264


>gi|319953673|ref|YP_004164940.1| thymidylate synthase [Cellulophaga algicola DSM 14237]
 gi|319422333|gb|ADV49442.1| thymidylate synthase [Cellulophaga algicola DSM 14237]
          Length = 274

 Score =  352 bits (902), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 155/277 (55%), Positives = 209/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+HV++ G+ + DRTG GT+S FGYQMRFDLSKGFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLLQHVLETGNQKGDRTGTGTKSVFGYQMRFDLSKGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW++WAD++G+LGP+YG QWR+W   +   IDQI   V++L+
Sbjct: 61  WFLKGDTNIDYLKENGVRIWNDWADENGDLGPVYGHQWRNW---NSEEIDQIKDAVETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR ++SAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLISAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A   G++ G+FIHT GD H+YNNH +Q +LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQACGYEAGDFIHTFGDAHIYNNHMDQVELQLSRDPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M++NP + ++  F++EDFTL  Y PH  I   V++
Sbjct: 238 PKMVLNPEVKNIFDFKFEDFTLVDYNPHPHIKGVVAI 274


>gi|262341260|ref|YP_003284115.1| thymidylate synthase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272597|gb|ACY40505.1| thymidylate synthase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 264

 Score =  352 bits (902), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 151/264 (57%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL++V+K G  R+DRTG+GT S FG+QMRF+L KGFPLLTTKK++ +S+++ELL
Sbjct: 1   MKQYLNLLKNVLKNGIKRKDRTGIGTISIFGHQMRFNLEKGFPLLTTKKLNIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  H VSIW+EWAD++GELGPIYG+QWR WP Y+G+ IDQI+++++ ++
Sbjct: 61  WFLKGDTNIQYLKDHQVSIWNEWADQNGELGPIYGLQWRKWPTYNGHFIDQIANLIEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVS+WNV +I  MALPPCH LFQFYV   KLS  LYQRS D+F+G+PFNIAS
Sbjct: 121 FNPNSRRLIVSSWNVGMIQNMALPPCHLLFQFYVSEKKLSLLLYQRSADIFIGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  MLA ++  +  E IH +GD H+YNNH +Q  LQ+ RSPR LP++I+NP++ ++ 
Sbjct: 181 YALLLTMLAKILNLKEKELIHIIGDAHIYNNHIQQVKLQMKRSPRPLPKIILNPSVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L++Y P   I   V++
Sbjct: 241 EFCFDDFQLKNYNPFPHIKGDVAI 264


>gi|332826869|gb|EGJ99669.1| thymidylate synthase [Dysgonomonas gadei ATCC BAA-286]
          Length = 264

 Score =  352 bits (902), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 157/264 (59%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+ V+  G+ + DRTG GT S FG+Q R++L+ GFP+LTTKK+H KS+++ELL
Sbjct: 1   MKQYHDLLKRVLAEGTHKSDRTGTGTISVFGHQSRYNLADGFPVLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  HGV IW+EWAD++G+LG IYG QWRSWPDY+G  IDQIS++V +++
Sbjct: 61  WFLAGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISNVVDTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +  M LPPCH  FQFYV +GKLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVADLPNMNLPPCHAFFQFYVADGKLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ +LQL+R  R LP+MIINP +  + 
Sbjct: 181 YALLLQMMAQVTGLEAGDFVHTLGDAHIYTNHLEQVNLQLTRDFRPLPRMIINPEVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF+L  Y+PH  I  +V++
Sbjct: 241 DFKFEDFSLEGYDPHPHIKGEVAI 264


>gi|118467946|ref|YP_887007.1| thymidylate synthase [Mycobacterium smegmatis str. MC2 155]
 gi|166231713|sp|A0QVR9|TYSY_MYCS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|118169233|gb|ABK70129.1| thymidylate synthase [Mycobacterium smegmatis str. MC2 155]
          Length = 266

 Score =  351 bits (901), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 166/261 (63%), Positives = 202/261 (77%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V + G+ + DRTG GTRS FG+QMR+DLS GFPL+TTKKVH KSV++ELLWFL
Sbjct: 7   YEDLLRLVTERGTPKSDRTGTGTRSLFGHQMRYDLSAGFPLITTKKVHTKSVIYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  HGV+IWDEWA + G+LGPIYGVQWRSWP   G  IDQISS ++ L++DP
Sbjct: 67  RGDSNVRWLQEHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISSALELLKSDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ  LQLSR PR  P++++ P    +  + 
Sbjct: 187 LTHMMAAQAGLDVGEFIWTGGDCHIYDNHTEQVALQLSREPRPYPELVLAPRD-SIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  + +Y+PH AI A V+V
Sbjct: 246 YEDIAIVNYDPHPAIKAPVAV 266


>gi|227115444|ref|ZP_03829100.1| thymidylate synthase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 264

 Score =  351 bits (901), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YLH + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  LR
Sbjct: 61  WFLNGDTNVVYLHENKVSIWDEWADENGDLGPVYGKQWRSWGAADGREIDQLKNVLTQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ +LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTNLQLSREPRALPKLVIKRRPDTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|71898344|ref|ZP_00680517.1| Thymidylate synthase [Xylella fastidiosa Ann-1]
 gi|71731867|gb|EAO33925.1| Thymidylate synthase [Xylella fastidiosa Ann-1]
          Length = 264

 Score =  351 bits (901), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N++YL +H V IWDEWAD  GELGP+YG QWR W   DG+ IDQI  +V+ ++
Sbjct: 61  WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA V G   G+F+HTLGD HLY NH EQA +QL R PR  P + +N  + DL 
Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y+D  +  Y+P+ AI A V+V
Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264


>gi|28199248|ref|NP_779562.1| thymidylate synthase [Xylella fastidiosa Temecula1]
 gi|182681974|ref|YP_001830134.1| thymidylate synthase [Xylella fastidiosa M23]
 gi|32130273|sp|Q87BT4|TYSY_XYLFT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|28057354|gb|AAO29211.1| thymidylate synthase [Xylella fastidiosa Temecula1]
 gi|182632084|gb|ACB92860.1| Thymidylate synthase [Xylella fastidiosa M23]
 gi|307578239|gb|ADN62208.1| thymidylate synthase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 264

 Score =  351 bits (900), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLELLNDVLVHGIKKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N++YL +H V IWDEWAD  GELGP+YG QWR W   DG+ IDQI  +V+ ++
Sbjct: 61  WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA V G   G+F+HTLGD HLY NH EQA +QL R PR  P + +N  + DL 
Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y+D  +  Y+P+ AI A V+V
Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264


>gi|298209224|ref|YP_003717403.1| thymidylate synthase [Croceibacter atlanticus HTCC2559]
 gi|83849151|gb|EAP87020.1| thymidylate synthase [Croceibacter atlanticus HTCC2559]
          Length = 274

 Score =  351 bits (900), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 159/277 (57%), Positives = 208/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+RHV+K G  + DRTG GT+S FGYQMRF+LS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLMRHVLKAGVQKGDRTGTGTKSVFGYQMRFNLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWR+W   +   IDQI  I+ +L+
Sbjct: 61  WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGHQWRNW---NSEEIDQIKDIIDTLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV  GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLVSAWNPSVMPNTSESFSENVAKGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+YNNHFEQ +LQLSR  R L
Sbjct: 178 ADIFLGVPFNIASYALLTMMIAQVCGYEAGDFIHTFGDAHIYNNHFEQVELQLSRECRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M IN ++ D+  F+++DFTL +Y PH  I   V++
Sbjct: 238 PKMQINKDVKDIFGFKFDDFTLINYNPHPHIKGAVAI 274


>gi|149926867|ref|ZP_01915126.1| thymidylate synthase [Limnobacter sp. MED105]
 gi|149824419|gb|EDM83637.1| thymidylate synthase [Limnobacter sp. MED105]
          Length = 264

 Score =  351 bits (900), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+D+ DRTG GTRS FGYQMRF+L  GFP++TTKK+H +S++HELL
Sbjct: 1   MQQYLDLMQHVLDHGTDKMDRTGTGTRSVFGYQMRFNLQDGFPMVTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GDSN+ YL  +GVSIWDEWAD++G LGP+YGVQWRSWP  DG  IDQIS ++Q ++
Sbjct: 61  WFLMGDSNIRYLKENGVSIWDEWADENGNLGPVYGVQWRSWPTADGRHIDQISQLMQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA I+ M LPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVADINNMKLPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       G+F+ T GD HLY+NH EQ   QLSR P  LP + I      + 
Sbjct: 181 YALLTHMVAQQCDLDVGDFVWTGGDCHLYSNHMEQVAEQLSRKPHPLPTLQIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF + +Y  H  I A V+V
Sbjct: 241 DYKFEDFEILNYTCHPHIKAPVAV 264


>gi|71276155|ref|ZP_00652435.1| Thymidylate synthase [Xylella fastidiosa Dixon]
 gi|71900364|ref|ZP_00682498.1| Thymidylate synthase [Xylella fastidiosa Ann-1]
 gi|170730616|ref|YP_001776049.1| thymidylate synthase [Xylella fastidiosa M12]
 gi|71163073|gb|EAO12795.1| Thymidylate synthase [Xylella fastidiosa Dixon]
 gi|71729867|gb|EAO31964.1| Thymidylate synthase [Xylella fastidiosa Ann-1]
 gi|167965409|gb|ACA12419.1| Thymidylate synthase [Xylella fastidiosa M12]
          Length = 264

 Score =  351 bits (900), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N++YL +H V IWDEWAD  GELGP+YG QWR W   DG+ IDQI  +V+ ++
Sbjct: 61  WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA V G   G+F+HTLGD HLY NH EQA +QL R PR  P + +N  + DL 
Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y+D  +  Y+P+ AI A V+V
Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264


>gi|15842302|ref|NP_337339.1| thymidylate synthase [Mycobacterium tuberculosis CDC1551]
 gi|215404733|ref|ZP_03416914.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987]
 gi|215412578|ref|ZP_03421306.1| thymidylate synthase [Mycobacterium tuberculosis 94_M4241A]
 gi|215431705|ref|ZP_03429624.1| thymidylate synthase [Mycobacterium tuberculosis EAS054]
 gi|215447016|ref|ZP_03433768.1| thymidylate synthase [Mycobacterium tuberculosis T85]
 gi|260187781|ref|ZP_05765255.1| thymidylate synthase [Mycobacterium tuberculosis CPHL_A]
 gi|260201893|ref|ZP_05769384.1| thymidylate synthase [Mycobacterium tuberculosis T46]
 gi|260206075|ref|ZP_05773566.1| thymidylate synthase [Mycobacterium tuberculosis K85]
 gi|294994142|ref|ZP_06799833.1| thymidylate synthase [Mycobacterium tuberculosis 210]
 gi|306777045|ref|ZP_07415382.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu001]
 gi|306780947|ref|ZP_07419284.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu002]
 gi|306785575|ref|ZP_07423897.1| thymidylate synthase [Mycobacterium tuberculosis SUMu003]
 gi|306790170|ref|ZP_07428492.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu004]
 gi|306798672|ref|ZP_07436974.1| thymidylate synthase [Mycobacterium tuberculosis SUMu006]
 gi|306807432|ref|ZP_07444100.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu007]
 gi|306968827|ref|ZP_07481488.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu009]
 gi|306973160|ref|ZP_07485821.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu010]
 gi|307080869|ref|ZP_07490039.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu011]
 gi|13882597|gb|AAK47153.1| thymidylate synthase [Mycobacterium tuberculosis CDC1551]
 gi|308214556|gb|EFO73955.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu001]
 gi|308326203|gb|EFP15054.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu002]
 gi|308329758|gb|EFP18609.1| thymidylate synthase [Mycobacterium tuberculosis SUMu003]
 gi|308333365|gb|EFP22216.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu004]
 gi|308341052|gb|EFP29903.1| thymidylate synthase [Mycobacterium tuberculosis SUMu006]
 gi|308346162|gb|EFP35013.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu007]
 gi|308353578|gb|EFP42429.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu009]
 gi|308357422|gb|EFP46273.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu010]
 gi|308361374|gb|EFP50225.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu011]
 gi|323718611|gb|EGB27775.1| thymidylate synthase thyA [Mycobacterium tuberculosis CDC1551A]
          Length = 266

 Score =  351 bits (900), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 166/261 (63%), Positives = 201/261 (77%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELLWFL
Sbjct: 7   YEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSN+ +LH HGV+IWDEWA   GELGPIYGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I++MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ  LQLSR PR  P++++  +   +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIFEYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++Y+PH AI A V+V
Sbjct: 246 YEDIVVKNYDPHPAIKAPVAV 266


>gi|256824789|ref|YP_003148749.1| thymidylate synthase [Kytococcus sedentarius DSM 20547]
 gi|256688182|gb|ACV05984.1| thymidylate synthase [Kytococcus sedentarius DSM 20547]
          Length = 264

 Score =  351 bits (900), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L  V++ G+   DRTG GT S FG Q R+DL+ GFPL+TTKKV+ + VV ELL
Sbjct: 1   MRQYLDWLTDVLENGTPTEDRTGTGTLSVFGRQTRYDLAAGFPLVTTKKVYRRGVVGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L    + IWDEWAD++G+LGP+YG QWRSWP  DG  +DQI+ +V+SLR
Sbjct: 61  WFLRGDTNVRWLQERKIHIWDEWADENGDLGPVYGAQWRSWPRPDGGTVDQIAKVVESLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A P SRRHIVSAWN A +D MALPPCH LFQF+V  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 AHPASRRHIVSAWNPAEVDDMALPPCHALFQFHVSGGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + GEF+HT+GD+HLY+NH EQA  QL+R PR LP++ +NP + +L 
Sbjct: 181 YALLTHMVAHVTDLEVGEFVHTVGDLHLYSNHLEQAREQLAREPRPLPRLELNPAVRELD 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D T   Y+PH AI A ++V
Sbjct: 241 AFDLDDVTFHGYDPHPAISAPIAV 264


>gi|17545666|ref|NP_519068.1| thymidylate synthase [Ralstonia solanacearum GMI1000]
 gi|22096223|sp|Q8Y0U6|TYSY_RALSO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|17427959|emb|CAD14649.1| probable thymidylate synthase (ts) (tsase) protein [Ralstonia
           solanacearum GMI1000]
          Length = 264

 Score =  351 bits (900), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MQPYLDLMRHVHEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD +GELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 61  WFLQGATNVRWLRENGVTIWDEWADAEGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD HLYNNHFEQ + QL+R+P  LP++ I      + 
Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF +  YE H AI A V+V
Sbjct: 241 DYRYEDFEIVGYESHPAIKAPVAV 264


>gi|149371858|ref|ZP_01891177.1| thymidylate synthetase [unidentified eubacterium SCB49]
 gi|149354998|gb|EDM43559.1| thymidylate synthetase [unidentified eubacterium SCB49]
          Length = 274

 Score =  350 bits (899), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 159/277 (57%), Positives = 209/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+HV+K G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKKVH KS+++ELL
Sbjct: 1   MKQYHDLLKHVLKEGTLKADRTGTGTKSVFGYQMRFDLSEGFPMVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD++G LGP+YG QWR+W   +   IDQI+ I+++L+
Sbjct: 61  WFLKGDTNIEYLKENGVRIWNEWADENGNLGPVYGHQWRNW---NSEGIDQIADIIETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPDSRRMMVSAWNPSVMPDTSKPFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR  R L
Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQIELQLSRDIRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP+I D+  F ++ FTL  Y PH  I   V++
Sbjct: 238 PKMTLNPDIKDIFGFTFDSFTLTDYNPHPHIKGAVAI 274


>gi|170750914|ref|YP_001757174.1| thymidylate synthase [Methylobacterium radiotolerans JCM 2831]
 gi|170657436|gb|ACB26491.1| Thymidylate synthase [Methylobacterium radiotolerans JCM 2831]
          Length = 264

 Score =  350 bits (899), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLR ++  G  + DRTG GT S FG+QMRFDLS GFPL+TTK++H +S++HELL
Sbjct: 1   MDAYHDLLRRILDEGVAKDDRTGTGTLSVFGHQMRFDLSAGFPLVTTKRLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+ L  +GV+IWDEWAD +G+LGP+YG QWRSW    G  +DQI+ ++  +R
Sbjct: 61  WFLAGDTNVAALRANGVTIWDEWADANGDLGPVYGRQWRSWERPGGGTVDQIAWVLDEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV  G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVSEGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G   G F+HT GD HLY NH EQ    L RSPR LPQ+ +NP + DL 
Sbjct: 181 YALLTHMIAQVTGLGVGAFVHTFGDAHLYRNHLEQTRTLLGRSPRPLPQLRLNPEVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  + +Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIENYDPHPAIAAPVAV 264


>gi|148823952|ref|YP_001288706.1| thymidylate synthase [Mycobacterium tuberculosis F11]
 gi|254551823|ref|ZP_05142270.1| thymidylate synthase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|289553451|ref|ZP_06442661.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 605]
 gi|289762936|ref|ZP_06522314.1| thymidylate synthase thyA [Mycobacterium tuberculosis GM 1503]
 gi|297635373|ref|ZP_06953153.1| thymidylate synthase [Mycobacterium tuberculosis KZN 4207]
 gi|148722479|gb|ABR07104.1| thymidylate synthase thyA [Mycobacterium tuberculosis F11]
 gi|289438083|gb|EFD20576.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 605]
 gi|289710442|gb|EFD74458.1| thymidylate synthase thyA [Mycobacterium tuberculosis GM 1503]
 gi|328457927|gb|AEB03350.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 4207]
          Length = 263

 Score =  350 bits (899), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 166/264 (62%), Positives = 201/264 (76%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELL
Sbjct: 1   MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSN+ +LH HGV+IWDEWA   GELGPIYGVQWRSWP   G  IDQIS+ +  LR
Sbjct: 61  WFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  I++MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A+  G   GEFI   GD H+Y+NH EQ  LQLSR PR  P++++  +   + 
Sbjct: 181 YALLTHMMAAQAGLSVGEFIWAGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIF 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YED  +++Y+PH AI A V+V
Sbjct: 240 EYTYEDIVVKNYDPHPAIKAPVAV 263


>gi|238896342|ref|YP_002921078.1| thymidylate synthase [Klebsiella pneumoniae NTUH-K2044]
 gi|262039838|ref|ZP_06013112.1| thymidylate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330009185|ref|ZP_08306468.1| thymidylate synthase [Klebsiella sp. MS 92-3]
 gi|238548660|dbj|BAH65011.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259042807|gb|EEW43804.1| thymidylate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328534871|gb|EGF61409.1| thymidylate synthase [Klebsiella sp. MS 92-3]
          Length = 264

 Score =  350 bits (899), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 157/264 (59%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQIS+++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQISTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|325954868|ref|YP_004238528.1| Thymidylate synthase [Weeksella virosa DSM 16922]
 gi|323437486|gb|ADX67950.1| Thymidylate synthase [Weeksella virosa DSM 16922]
          Length = 264

 Score =  350 bits (899), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL + V++ G+ + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH KS+++ELL
Sbjct: 1   MKQYLDLCKKVMQEGTLKEDRTGTGTKSIFGYQMRFDLNEGFPLVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+SYL  +GV IW+EWAD++GELGP+YG QWRSW   +G  IDQI  ++  ++
Sbjct: 61  WFLKGETNISYLTENGVRIWNEWADENGELGPVYGKQWRSWAKPNGETIDQIKEVIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MAL PCH  FQFYV + KLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGELDEMALAPCHAFFQFYVADDKLSLQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V   + G+F+HT GD H+Y NHF+Q +LQLSR P  LP+M INP++ D+ 
Sbjct: 181 YALLQMMVAQVCNLELGDFVHTFGDAHIYKNHFDQIELQLSRDPFPLPKMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++ DF L  Y+ H  I   V+V
Sbjct: 241 DFQFSDFELIDYQSHPHIKGIVAV 264


>gi|253687303|ref|YP_003016493.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|259550794|sp|C6DAE9|TYSY_PECCP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|251753881|gb|ACT11957.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 264

 Score =  350 bits (898), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  LR
Sbjct: 61  WFLNGDTNVAYLHENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTQLQLSREPRALPKLVIKRRPDTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPTIKAPVAI 264


>gi|284037715|ref|YP_003387645.1| thymidylate synthase [Spirosoma linguale DSM 74]
 gi|283817008|gb|ADB38846.1| thymidylate synthase [Spirosoma linguale DSM 74]
          Length = 264

 Score =  350 bits (898), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLRH++  G+ + DRTG GT S FGYQMRF+L +GFPLLTTKKVH KS++HELL
Sbjct: 1   MQQYHDLLRHILANGTRKTDRTGTGTISVFGYQMRFNLQEGFPLLTTKKVHTKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSW    G VIDQ+  +++ L+
Sbjct: 61  WFIKGDTNIKYLKDNGVSIWDEWADENGDLGPVYGKQWRSWAGPQGQVIDQLQDVLRQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR I+SAWN A +  MALPPCH L QFYV + KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NTPDSRRIIISAWNPADVPSMALPPCHLLMQFYVADNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G +  EFI T GD HLY NH EQ + QL+R  R LP M +NP++  + 
Sbjct: 181 YALLTMMIAQECGLEAHEFIWTGGDTHLYLNHLEQVETQLARDFRPLPTMRLNPDVRSVF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y DFTL +Y PH AI A V+V
Sbjct: 241 DFTYADFTLENYNPHPAIKAPVAV 264


>gi|229915874|ref|YP_002884520.1| thymidylate synthase [Exiguobacterium sp. AT1b]
 gi|259550780|sp|C4L1C9|TYSY_EXISA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|229467303|gb|ACQ69075.1| thymidylate synthase [Exiguobacterium sp. AT1b]
          Length = 264

 Score =  350 bits (898), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RH++  G  + DRTG GT S FGYQMRF+L +GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYHDLCRHILDQGVVKEDRTGTGTTSVFGYQMRFNLQEGFPLITTKKLHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ G++NV YL  +GV IW+EWAD++G LGP+YG QWRS+P  DG+ +DQ++ +++ ++
Sbjct: 61  WFISGETNVRYLQDNGVRIWNEWADEEGNLGPVYGSQWRSFPRPDGSSVDQLAQVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   +++MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNPGQLEEMALPPCHLLFQFYVADGKLSCQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HTLGD H+Y+NH EQ +LQLSR PR LP++ I  ++  + 
Sbjct: 181 YALLTHMVAHVTGLEVGDFVHTLGDAHIYHNHLEQVELQLSRDPRPLPKLNIVRDVSSIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFR+EDF +  Y+PH  I  +VSV
Sbjct: 241 SFRFEDFEILGYDPHPHIKGEVSV 264


>gi|167647347|ref|YP_001685010.1| thymidylate synthase [Caulobacter sp. K31]
 gi|167349777|gb|ABZ72512.1| Thymidylate synthase [Caulobacter sp. K31]
          Length = 283

 Score =  350 bits (897), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 158/262 (60%), Positives = 201/262 (76%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LL  +++ G +R DRTG GT+  FG Q+RFDLS+GFP+LTTKK+H +S++ ELLWF
Sbjct: 23  QYLNLLADILENGVERGDRTGTGTKGVFGRQIRFDLSQGFPVLTTKKLHLRSIIVELLWF 82

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD+NV YL  +G  IWDEWAD++G+LGP+YG QWRSW   +G  IDQI ++++ L+ +
Sbjct: 83  LRGDTNVKYLQDNGCKIWDEWADENGDLGPVYGKQWRSWATPNGQSIDQIQNLIEGLKTN 142

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRRHIVSAWN A ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 143 PNSRRHIVSAWNPADVEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 202

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT+M+A V+G + GEF+HT GD HLY NH +QA  QL R P+  P + +  N  DL +F
Sbjct: 203 LLTLMVAQVVGLKPGEFVHTFGDAHLYMNHLDQAREQLQREPKPFPTLKM-ANKRDLFAF 261

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            Y DF L  YE H  I A V+V
Sbjct: 262 EYADFQLEGYEAHPHIKAAVAV 283


>gi|152971755|ref|YP_001336864.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|166231708|sp|A6TDG3|TYSY_KLEP7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|150956604|gb|ABR78634.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 264

 Score =  350 bits (897), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|94311504|ref|YP_584714.1| thymidylate synthase [Cupriavidus metallidurans CH34]
 gi|122987875|sp|Q1LK81|TYSY_RALME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|93355356|gb|ABF09445.1| thymidylate synthetase [Cupriavidus metallidurans CH34]
          Length = 264

 Score =  350 bits (897), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDL++GFP++TTKK+H KS++HELL
Sbjct: 1   MKQYLDFMRHVYEHGTEKSDRTGTGTRSVFGYQMRFDLNEGFPVVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N+ YL  +GV+IWDEWAD +GELGPIYG QWR+WP  DG  IDQI+ +VQ +R
Sbjct: 61  WFLQGSTNIKYLKDNGVTIWDEWADANGELGPIYGYQWRAWPTPDGRHIDQITEVVQQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 DNPDSRRLIVSAWNVGEIPQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       G+F+ T GD H+Y+NHFEQ + QLSR P  LP + I      + 
Sbjct: 181 YALLTHMIAQQCDLGVGDFVWTGGDCHIYSNHFEQVETQLSREPMKLPTLRIKHRPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++Y+DF L  YE H AI A V+V
Sbjct: 241 DYKYDDFELVGYESHPAIKAPVAV 264


>gi|261749228|ref|YP_003256913.1| thymidylate synthase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497320|gb|ACX83770.1| thymidylate synthase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 279

 Score =  349 bits (896), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 153/265 (57%), Positives = 209/265 (78%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL++V+K G  + DRTG+GT+S FG QMRF+L KGFPLLTTKK+  +S+++ELL
Sbjct: 15  MEQYLDLLKNVLKNGIKKMDRTGIGTKSLFGSQMRFNLKKGFPLLTTKKLSIRSIIYELL 74

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N+ YL  + VSIW+EWA+++G+LGPIYG+QWR WP YDG+ IDQI+++++ ++
Sbjct: 75  WFLKGYTNIQYLKENKVSIWNEWANENGDLGPIYGLQWRKWPAYDGHFIDQITNLIKEIK 134

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSCQLYQRSGDVFLGIPFNIA 179
           ++P+SRR IVS+WNV +I +M LPPCH LFQFYV   K LS QLYQRS D+FLG+PFNIA
Sbjct: 135 SNPHSRRLIVSSWNVGMIQEMRLPPCHLLFQFYVSEKKQLSLQLYQRSADIFLGLPFNIA 194

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LL  M+A  + F   EFIHT+GD H+YNNH EQ  LQ+ R P+ LP++++NP++ ++
Sbjct: 195 SYALLLTMVAKTLNFIAKEFIHTIGDAHIYNNHIEQVKLQIQRPPKPLPKILLNPSVKNV 254

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
           L F +EDF L +Y PH  I   V+V
Sbjct: 255 LDFSFEDFKLINYNPHPHIKGDVAV 279


>gi|332994533|gb|AEF04588.1| thymidylate synthase [Alteromonas sp. SN2]
          Length = 277

 Score =  349 bits (896), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 162/277 (58%), Positives = 204/277 (73%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL L+RHV   G  + DRTG GT S FGYQMRFDL +GFPL+TTKK H KS++HELL
Sbjct: 1   MKEYLALMRHVRDTGVKKEDRTGTGTLSVFGYQMRFDLQQGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G+SN++YL  +GVSIWD WA ++GELGP+YG QWRSW + DG  IDQI+ +++ ++
Sbjct: 61  WFLKGESNIAYLKENGVSIWDGWATEEGELGPVYGKQWRSWDNGDGTTIDQIADVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH +FQFYV +GKLSCQLYQRS
Sbjct: 121 TNPDSRRLIVSAWNPSVLPDTQYSPRENASMGKQALPPCHTMFQFYVLDGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GD+FLGIPFNIASY+LLTMM+A V   + G+FI TLGD HLY+NH EQ DLQLSR P   
Sbjct: 181 GDIFLGIPFNIASYALLTMMIAQVCDLEPGDFILTLGDAHLYSNHLEQVDLQLSREPFAP 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +N ++ D+  F +EDFTL+ Y  H  I A V++
Sbjct: 241 PVMELNKSVKDIFDFSFEDFTLKGYHSHPHIKAPVAI 277


>gi|218754505|ref|ZP_03533301.1| thymidylate synthase [Mycobacterium tuberculosis GM 1503]
 gi|253798154|ref|YP_003031155.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 1435]
 gi|297732371|ref|ZP_06961489.1| thymidylate synthase [Mycobacterium tuberculosis KZN R506]
 gi|313659703|ref|ZP_07816583.1| thymidylate synthase [Mycobacterium tuberculosis KZN V2475]
 gi|253319657|gb|ACT24260.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 1435]
          Length = 266

 Score =  349 bits (896), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 165/261 (63%), Positives = 200/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELLWFL
Sbjct: 7   YEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSN+ +LH HGV+IWDEWA   GELGPIYGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I++MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI   GD H+Y+NH EQ  LQLSR PR  P++++  +   +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFIWAGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIFEYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++Y+PH AI A V+V
Sbjct: 246 YEDIVVKNYDPHPAIKAPVAV 266


>gi|299066921|emb|CBJ38116.1| thymidylate synthetase [Ralstonia solanacearum CMR15]
          Length = 264

 Score =  349 bits (895), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MQPYLDLMRHVHEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD +GELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 61  WFLQGATNVRWLRENGVTIWDEWADAEGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD HLYNNHFEQ + QL+R+P  LP++ I      + 
Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF +  YE H AI A V+V
Sbjct: 241 DYRYEDFEIVGYESHPAIKAPVAV 264


>gi|300704706|ref|YP_003746309.1| thymidylate synthetase [Ralstonia solanacearum CFBP2957]
 gi|299072370|emb|CBJ43708.1| thymidylate synthetase [Ralstonia solanacearum CFBP2957]
          Length = 264

 Score =  349 bits (895), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQRGFPLVTTKKVHIKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 61  WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD HLYNNHFEQ + QL+R+P  LP++ I      + 
Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARAPLPLPKLHIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+ HAAI A V+V
Sbjct: 241 DYQFEDFEIVGYQSHAAIKAPVAV 264


>gi|261822635|ref|YP_003260741.1| thymidylate synthase [Pectobacterium wasabiae WPP163]
 gi|261606648|gb|ACX89134.1| thymidylate synthase [Pectobacterium wasabiae WPP163]
          Length = 264

 Score =  349 bits (895), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V++ G+ + DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMNKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL+ + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  LR
Sbjct: 61  WFLNGDTNVAYLNENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYNNHMEQTHLQLSREPRALPKLVIKRRPDTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|91215934|ref|ZP_01252903.1| thymidylate synthase [Psychroflexus torquis ATCC 700755]
 gi|91185911|gb|EAS72285.1| thymidylate synthase [Psychroflexus torquis ATCC 700755]
          Length = 274

 Score =  349 bits (895), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 157/277 (56%), Positives = 205/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+ H++  G  + DRTG GT+S FGYQMRFDL++GFPL+T+KK+H KS+++ELL
Sbjct: 1   MKQYHDLISHILNNGIQKGDRTGTGTKSVFGYQMRFDLNEGFPLVTSKKIHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+SYL  +GV IW+EWA++DG+LGP+YG QWR+W   D   IDQI  ++ +L+
Sbjct: 61  WFLKGDTNISYLKENGVKIWNEWANEDGDLGPVYGHQWRNWNSED---IDQIKELIHTLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV  GKLSCQLYQRS
Sbjct: 118 TNPNSRRMMVSAWNPSVMPDTSASFDDNIANGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+L TMM+A V G + G+FIHT GD H+YNNH EQ DLQLSR+   L
Sbjct: 178 ADVFLGVPFNIASYALFTMMVAQVCGLKLGDFIHTFGDAHIYNNHLEQVDLQLSRTEIPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP +  +  F++EDFTL +Y+PH  I  KV++
Sbjct: 238 PTMKLNPEVNSIFDFKFEDFTLENYDPHPHIKGKVAI 274


>gi|312129644|ref|YP_003996984.1| thymidylate synthase [Leadbetterella byssophila DSM 17132]
 gi|311906190|gb|ADQ16631.1| thymidylate synthase [Leadbetterella byssophila DSM 17132]
          Length = 260

 Score =  349 bits (895), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 157/264 (59%), Positives = 205/264 (77%), Gaps = 4/264 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLRH++K G+ + DRTG GT S FGYQMRFDLSKGFPL+TTKK+H KS++HELL
Sbjct: 1   MQQYQDLLRHILKEGTQKTDRTGTGTLSVFGYQMRFDLSKGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ GD+N+ YL  +GVSIWDEWA+++G+LGP+YG QWR+W D     IDQ+  ++ +++
Sbjct: 61  WFINGDTNIKYLKDNGVSIWDEWANENGDLGPVYGKQWRAWNDE----IDQLKEVINTIK 116

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV+ + +MAL PCH LFQFYV + KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 117 HNPDSRRMIVSAWNVSDLPRMALMPCHALFQFYVADNKLSCQLYQRSADVFLGVPFNIAS 176

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G + G+F+ T GD HLY NH EQ + QL R+P+ LP M +NP++  + 
Sbjct: 177 YALLTMMIAQECGLELGDFVWTGGDTHLYLNHLEQVNKQLERTPKALPIMKLNPDVKSVF 236

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+P+  I A V+V
Sbjct: 237 DFKFEDFELVNYDPYPGIKAPVAV 260


>gi|206577831|ref|YP_002236751.1| thymidylate synthase [Klebsiella pneumoniae 342]
 gi|288933717|ref|YP_003437776.1| thymidylate synthase [Klebsiella variicola At-22]
 gi|290511203|ref|ZP_06550572.1| thymidylate synthase [Klebsiella sp. 1_1_55]
 gi|206566889|gb|ACI08665.1| thymidylate synthase [Klebsiella pneumoniae 342]
 gi|288888446|gb|ADC56764.1| thymidylate synthase [Klebsiella variicola At-22]
 gi|289776196|gb|EFD84195.1| thymidylate synthase [Klebsiella sp. 1_1_55]
          Length = 264

 Score =  349 bits (895), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHDNNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|50119928|ref|YP_049095.1| thymidylate synthase [Pectobacterium atrosepticum SCRI1043]
 gi|62901301|sp|Q6D8I6|TYSY_ERWCT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|49610454|emb|CAG73899.1| thymidylate synthase [Pectobacterium atrosepticum SCRI1043]
          Length = 264

 Score =  349 bits (895), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL+ + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  LR
Sbjct: 61  WFLNGDTNVAYLNENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHMEQTHLQLSREPRALPKLVIKRRPDTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|88812437|ref|ZP_01127686.1| thymidylate synthase [Nitrococcus mobilis Nb-231]
 gi|88790223|gb|EAR21341.1| thymidylate synthase [Nitrococcus mobilis Nb-231]
          Length = 277

 Score =  348 bits (894), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 164/277 (59%), Positives = 205/277 (74%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LLRHV+  G  + DRTG GT S FGYQMRFDL +G PLLTTK++H +S+VHELL
Sbjct: 1   MKQYLELLRHVLHQGVRKSDRTGTGTLSVFGYQMRFDLQQGLPLLTTKRLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L G+SN+ YL  +GVSIWDEWAD++GELGPIYG QWR WP  DG+ IDQI+ ++  ++
Sbjct: 61  WLLSGESNIGYLKENGVSIWDEWADENGELGPIYGPQWRKWPAQDGSTIDQITDVIDGIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRRHIVSAWNVA +              +MALP CH LFQFYV +GKLSCQLYQRS
Sbjct: 121 QNPNSRRHIVSAWNVAYLPEESLSPQANVAQGRMALPACHALFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLT M+A   G   G+F+ T GDVH+Y+NH EQA LQLSR+PR L
Sbjct: 181 CDVFLGVPFNIASYALLTHMIAQECGLAPGDFVWTGGDVHVYSNHLEQARLQLSRAPRPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++II      + ++ Y+DF +  Y+PH AI A ++V
Sbjct: 241 PKLIIKRKPDSIFNYCYDDFEIVGYDPHPAIKAPIAV 277


>gi|126662422|ref|ZP_01733421.1| thymidylate synthetase [Flavobacteria bacterium BAL38]
 gi|126625801|gb|EAZ96490.1| thymidylate synthetase [Flavobacteria bacterium BAL38]
          Length = 274

 Score =  348 bits (894), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 158/277 (57%), Positives = 205/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV++ G+ + DRTG GT S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLVKHVLENGNQKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G LGP+YG QWR+W   +   IDQI+ ++++L+
Sbjct: 61  WFLNGDTNIKYLQENGVKIWDEWADENGNLGPVYGHQWRNW---NSEEIDQITELIETLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 TNPNSRRMLVSAWNPSVLPDTSVSFAENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V   Q G+FIHT GD H+YNNH EQ +LQLSR  R L
Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCDLQVGDFIHTFGDAHIYNNHMEQVELQLSRDCRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP I ++  F++EDFTL  Y+PH  I   V+V
Sbjct: 238 PTMKLNPEIKNIFDFKFEDFTLEGYDPHPHIKGIVAV 274


>gi|83648497|ref|YP_436932.1| thymidylate synthase [Hahella chejuensis KCTC 2396]
 gi|123753522|sp|Q2SA17|TYSY_HAHCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|83636540|gb|ABC32507.1| Thymidylate synthase [Hahella chejuensis KCTC 2396]
          Length = 264

 Score =  348 bits (894), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 158/264 (59%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++RHV + G+ + DRTG GTRS FGYQMRFDL +GFPL+TTKK+H +S+++ELL
Sbjct: 1   MKQYLDMMRHVREQGAVKTDRTGTGTRSVFGYQMRFDLQQGFPLVTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD+ G+LGP+YG QWRSWP  +G  IDQIS+++  ++
Sbjct: 61  WFLNGDTNIKYLKDNGVSIWDEWADESGDLGPVYGYQWRSWPAPNGEHIDQISNVLAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRH+V A+N A +D+MALPPCH +FQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRHMVVAYNPAFVDQMALPPCHAMFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M A       G+FI T GDVHLYNNH +QA  QL R PR LPQ+ I      L 
Sbjct: 181 YALLTHMFAQQCDLDVGDFIWTGGDVHLYNNHLDQAKEQLDREPRPLPQLQIRRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+PH  I A V+V
Sbjct: 241 DYEFEDFEITGYDPHPHIKAPVAV 264


>gi|332285402|ref|YP_004417313.1| thymidylate synthase [Pusillimonas sp. T7-7]
 gi|330429355|gb|AEC20689.1| thymidylate synthase [Pusillimonas sp. T7-7]
          Length = 264

 Score =  348 bits (893), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 163/264 (61%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY D +RHV + G+++ DRTG GTRS FG+QMRFDLS GFPL+T+KK+H KS+  ELL
Sbjct: 1   MHQYEDFMRHVYEHGTEKTDRTGTGTRSVFGHQMRFDLSAGFPLITSKKLHTKSIFIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSNV +L   GVSIW+EWAD++G+LGP+YGVQWRSWP   G  IDQI+ ++Q +R
Sbjct: 61  WFLRGDSNVRWLQEQGVSIWNEWADQNGDLGPVYGVQWRSWPTPGGQHIDQIAQVLQQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I  MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QNPDSRRLIVSAWNVAEIPNMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+FI T GD HLY+NH EQ +LQLSR P   P++ I      + 
Sbjct: 181 YALLTHMVAQQCDLEVGDFIWTGGDCHLYSNHMEQVELQLSRKPYPYPKLQIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF +  YE H  I A V+V
Sbjct: 241 DYRYEDFEIVGYESHPHIKAPVAV 264


>gi|254495239|ref|ZP_05108163.1| Thymidylate synthase [Polaribacter sp. MED152]
 gi|85819592|gb|EAQ40749.1| Thymidylate synthase [Polaribacter sp. MED152]
          Length = 274

 Score =  348 bits (892), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 155/277 (55%), Positives = 210/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+V+ELL
Sbjct: 1   MKQYHDLVKHVLENGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+NV YL  +GV IW+EWAD++G+LGP+YG QWR+W   + + +DQ+  ++ +L+
Sbjct: 61  WFIKGDTNVKYLQENGVRIWNEWADENGDLGPVYGHQWRNW---NSDEVDQLKEVIATLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
           ++P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 SNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVSDGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+YNNH EQ +LQLSR  R L
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYNNHVEQLELQLSRDIRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +N  I ++  F ++DF L+ Y PH  I  KV+V
Sbjct: 238 PKMKLNTAITNIEDFTFDDFELQDYNPHPHIKGKVAV 274


>gi|317049336|ref|YP_004116984.1| thymidylate synthase [Pantoea sp. At-9b]
 gi|316950953|gb|ADU70428.1| thymidylate synthase [Pantoea sp. At-9b]
          Length = 264

 Score =  348 bits (892), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+++ DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMQHVLNEGAEKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V+IWDEWAD++G+LGP+YG QWRSW + +G  IDQIS +++ L+
Sbjct: 61  WFLQGDTNIGYLKDNKVTIWDEWADENGDLGPVYGKQWRSWGNANGEQIDQISRVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL+R PR LP++II      + 
Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLIIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+PH AI A V++
Sbjct: 241 DYQFEDFEIEGYDPHPAIKAPVAI 264


>gi|161870554|ref|YP_001599726.1| thymidylate synthase [Neisseria meningitidis 053442]
 gi|161596107|gb|ABX73767.1| thymidylate synthase [Neisseria meningitidis 053442]
          Length = 231

 Score =  348 bits (892), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 155/231 (67%), Positives = 189/231 (81%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           MRFDL KGFPLLTTKK+H +S++HELLWFL+GD+N+ YL  + VSIWDEWAD++G+LGP+
Sbjct: 1   MRFDLGKGFPLLTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPV 60

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG QWR+WP  DG  IDQI+++++ ++ +P SRR IVSAWN AL+D+MALPPCH LFQFY
Sbjct: 61  YGYQWRNWPAPDGRHIDQIANVLEQIKKNPDSRRLIVSAWNPALVDEMALPPCHTLFQFY 120

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V +GKLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G + GEF+HT GD HLY NHF
Sbjct: 121 VADGKLSCQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHF 180

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           EQA LQL R PR LP M INP + DL SF++EDF L  Y+PH  I A VSV
Sbjct: 181 EQAALQLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV 231


>gi|72118031|gb|AAZ60294.1| thymidylate synthase [Ralstonia eutropha JMP134]
          Length = 281

 Score =  347 bits (891), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDLS+GFP++TTKK+H KS++ ELL
Sbjct: 18  MKQYLDFMRHVFEHGTEKADRTGTGTRSVFGYQMRFDLSQGFPVVTTKKLHLKSIILELL 77

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GVSIWDEWAD++GELGP+YG QWRSWP  DG  +DQI+ ++  +R
Sbjct: 78  WFLQGSTNVRWLQENGVSIWDEWADENGELGPVYGSQWRSWPTPDGRHVDQITDLLNQIR 137

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 138 ENPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 197

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD H+Y+NH+EQ   QLSR P  LP + I      + 
Sbjct: 198 YALLTHMIAQQTGLDVGDFVWTGGDCHIYSNHYEQVQTQLSREPLPLPTLKIVRKPDSIF 257

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF L  Y+ H AI A V+V
Sbjct: 258 DYRYEDFELVGYQSHPAIKAPVAV 281


>gi|300724836|ref|YP_003714161.1| thymidylate synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|62901326|sp|Q6REU8|TYSY_XENNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|46102543|gb|AAS80323.1| thymidylate synthetase [Xenorhabdus nematophila]
 gi|297631378|emb|CBJ92073.1| thymidylate synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 264

 Score =  347 bits (891), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTAKDDRTGTGTRSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YLH +GVSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ++ +++ L+
Sbjct: 61  WFLNGDTNIKYLHDNGVSIWDEWADENGDLGPVYGKQWRAWGSADGRHIDQLTQVLEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 GDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCNLDVGDFVWTGGDTHLYNNHLEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+P+  I A V++
Sbjct: 241 DYRFEDFEIVDYDPYPGIKAPVAI 264


>gi|253576709|ref|ZP_04854036.1| thymidylate synthase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843919|gb|EES71940.1| thymidylate synthase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 264

 Score =  347 bits (891), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 158/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YLDLL  V+K G+ + DRTGVGTRS FG Q+RFDLS+GFPL+TTK++H KSV+HELL
Sbjct: 1   MRKYLDLLEDVLKNGTPKEDRTGVGTRSVFGRQLRFDLSEGFPLVTTKRIHLKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  HGV IWDEWAD++G+LGP+YG QWRSW   DG  IDQI+++V++++
Sbjct: 61  WFLRGDTNIAYLKEHGVRIWDEWADENGDLGPVYGSQWRSWEAPDGRKIDQIANVVEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRH+VSAWNVA +D+M LPPCH +FQFYV NGKLSC L  RS D FLG+PFNIAS
Sbjct: 121 KNPDSRRHLVSAWNVAEVDQMKLPPCHFVFQFYVANGKLSCMLTMRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GEFI + GDVH+YNNH EQ   QL R P  LP+++I      + 
Sbjct: 181 YALLTHMIAQQCDLEVGEFIWSGGDVHIYNNHIEQVKTQLEREPYPLPKLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF    Y+ H  I A V+V
Sbjct: 241 DYKYEDFEFIDYQYHPTIKATVAV 264


>gi|187927913|ref|YP_001898400.1| thymidylate synthase [Ralstonia pickettii 12J]
 gi|187724803|gb|ACD25968.1| Thymidylate synthase [Ralstonia pickettii 12J]
          Length = 264

 Score =  347 bits (890), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L  GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGP+YG QWRSWP  +G  IDQI+ ++  ++
Sbjct: 61  WFLQGSTNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G   G+F+ T GD HLYNNHFEQ   QL+R P  LP++II      + 
Sbjct: 181 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVQTQLAREPLPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF +  Y+ H AI A V+V
Sbjct: 241 DYQYEDFEILGYQSHPAIKAPVAV 264


>gi|319950119|ref|ZP_08024059.1| thymidylate synthase [Dietzia cinnamea P4]
 gi|319436222|gb|EFV91402.1| thymidylate synthase [Dietzia cinnamea P4]
          Length = 266

 Score =  347 bits (890), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 166/263 (63%), Positives = 207/263 (78%), Gaps = 5/263 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL+ V++ G+ + DRTG GTRS FG+Q+R+DL++GFPL+TTK+VH+KSV +ELLWFL
Sbjct: 7   YEDLLQLVLEQGAPKADRTGTGTRSLFGHQLRYDLAQGFPLITTKRVHFKSVAYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +GV+IWDEWAD DGELGP+YGVQWRSWP  DG  IDQI++ V+ LRADP
Sbjct: 67  RGDSNVGWLRENGVTIWDEWADADGELGPVYGVQWRSWPTPDGAHIDQIAAAVELLRADP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ + +MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 127 DSRRNIVSAWNVSELSEMALPPCHLLFQFYVADGKLSCQLYQRSADLFLGVPFNIASYSL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN--PNIVDLLS 241
           LT M+A  +G + GEFI T GD H+Y+NH EQ   QLSR P   P++ +N  P+I D   
Sbjct: 187 LTHMIAQQVGLEVGEFIWTGGDCHIYDNHVEQVRTQLSREPYPYPELRLNRAPSIFD--- 243

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + +EDF +  YE H  I A V+V
Sbjct: 244 YTFEDFEVVGYEHHPGIKAPVAV 266


>gi|264679393|ref|YP_003279300.1| thymidylate synthase [Comamonas testosteroni CNB-2]
 gi|262209906|gb|ACY34004.1| thymidylate synthase [Comamonas testosteroni CNB-2]
          Length = 294

 Score =  347 bits (890), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY   +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF
Sbjct: 32  QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           LRGDSNV +L   G +IWDEWADK  G+LGP+YGVQWRSWP  DG  +DQI+ +V+ L++
Sbjct: 92  LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLKS 151

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR IVSAWNVA +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY
Sbjct: 152 NPDSRRVIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 211

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA   G + G+FI T GD H+YNNHFEQ   QLSR P   P + I      +  
Sbjct: 212 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPASIFD 271

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + YEDF +  Y+ HA I A V+V
Sbjct: 272 YEYEDFEVLDYQHHAGIKAPVAV 294


>gi|83745787|ref|ZP_00942844.1| Thymidylate synthase [Ralstonia solanacearum UW551]
 gi|83727477|gb|EAP74598.1| Thymidylate synthase [Ralstonia solanacearum UW551]
          Length = 334

 Score =  347 bits (890), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 71  MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 130

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 131 WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 190

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 191 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 250

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       G+F+ T GD HLYNNHFEQ + QL+R+P  LP++ I      + 
Sbjct: 251 YALLTHMIAQQTSLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIF 310

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+ HAAI A V+V
Sbjct: 311 DYQFEDFEIVGYQSHAAIKAPVAV 334


>gi|302529833|ref|ZP_07282175.1| thymidylate synthase [Streptomyces sp. AA4]
 gi|302438728|gb|EFL10544.1| thymidylate synthase [Streptomyces sp. AA4]
          Length = 265

 Score =  347 bits (890), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 161/262 (61%), Positives = 203/262 (77%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL+HV+  G+++ DRTG GTRS FG+Q+R+ L+ GFPL+TTKKVH++S+ +ELLWF
Sbjct: 5   QYEDLLQHVLDTGAEKGDRTGTGTRSIFGHQLRYRLADGFPLITTKKVHFRSIAYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV++L  HGV+IWDEWA  DG+LGP+YGVQWRSWP  DG  +DQIS ++++LR +
Sbjct: 65  LRGDSNVTWLRDHGVTIWDEWAAPDGDLGPVYGVQWRSWPTPDGGHVDQISDVLRTLREN 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  I +MALPPCH  FQFYV NG+LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRIIVSAWNVGDIPQMALPPCHAFFQFYVANGELSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A  +G + G+FI T GD H+Y+NH EQ   QLSR  R  P + + P    L  +
Sbjct: 185 LLTHMIADQVGLRVGDFIWTGGDCHIYDNHVEQVRKQLSRDARPFPTLSLKP-AESLFDY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           RYEDF+L  Y+PH  I A V+V
Sbjct: 244 RYEDFSLEGYDPHPGIKAPVAV 265


>gi|114776706|ref|ZP_01451749.1| thymidylate synthase [Mariprofundus ferrooxydans PV-1]
 gi|114552792|gb|EAU55223.1| thymidylate synthase [Mariprofundus ferrooxydans PV-1]
          Length = 277

 Score =  347 bits (890), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 159/277 (57%), Positives = 201/277 (72%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV   G+ + DRTG GTRS FG+QMRFDLS GFP++TTKKVH KS++HELL
Sbjct: 1   MKSYLDLMRHVRDHGTQKGDRTGTGTRSVFGHQMRFDLSAGFPMVTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N +YL  +GVSIW+EWA +DG LGP+YG QWR+WP   G  IDQIS +++ ++
Sbjct: 61  WFLKGETNTAYLSENGVSIWNEWATEDGSLGPVYGYQWRNWPTPSGESIDQISELIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
           A P SRR IVSAWNVA +              KMAL PCH  FQFYV +GKLSCQLYQRS
Sbjct: 121 ARPNSRRLIVSAWNVADLPDESISPQANVAEGKMALAPCHAFFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V   + G+FIHT GD HLY+NH EQ + QL+R    L
Sbjct: 181 ADIFLGVPFNIASYALLTMMIAQVCELEPGDFIHTFGDAHLYSNHTEQVETQLARECYPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + ++  F Y+DF L  Y+ H  I A +++
Sbjct: 241 PTMKLNPAVKNIFDFTYDDFELSDYQCHPGIRAPIAI 277


>gi|117618975|ref|YP_855217.1| thymidylate synthase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|166231685|sp|A0KG32|TYSY_AERHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|117560382|gb|ABK37330.1| thymidylate synthase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 264

 Score =  347 bits (890), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL
Sbjct: 1   MRAYLDLMQKILDEGTVKSDRTGTGTISLFGHQMRFNLAEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG+VIDQI   V  ++
Sbjct: 61  WFLNGDTNTAYLKEHGVSIWDEWADENGDLGPVYGAQWRSWPAADGSVIDQIQKAVDDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+F+ T GDVHLY+NH EQ  LQL+R PR LP ++I      + 
Sbjct: 181 YALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLTREPRPLPTLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+PH  I A V++
Sbjct: 241 DYKFEDFEIEGYDPHPGIKAPVAI 264


>gi|207743702|ref|YP_002260094.1| thymidylate synthase (ts) (tsase) protein [Ralstonia solanacearum
           IPO1609]
 gi|206595101|emb|CAQ62028.1| thymidylate synthase (ts) (tsase) protein [Ralstonia solanacearum
           IPO1609]
          Length = 276

 Score =  347 bits (889), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 13  MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 72

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 73  WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 132

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 133 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 192

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       G+F+ T GD HLYNNHFEQ + QL+R+P  LP++ I      + 
Sbjct: 193 YALLTHMIAQQTSLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIF 252

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+ HAAI A V+V
Sbjct: 253 DYQFEDFEIVGYQSHAAIKAPVAV 276


>gi|54026996|ref|YP_121238.1| thymidylate synthase [Nocardia farcinica IFM 10152]
 gi|62901241|sp|Q5YPL7|TYSY_NOCFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54018504|dbj|BAD59874.1| putative thymidylate synthase [Nocardia farcinica IFM 10152]
          Length = 266

 Score =  347 bits (889), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 166/262 (63%), Positives = 198/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLR V+  G+ + DRTG GTRS FG+Q+R+DLS GFPL+TTKKVH KS+V+ELLWF
Sbjct: 6   QYEDLLRLVLDTGTAKGDRTGTGTRSIFGHQLRYDLSAGFPLITTKKVHLKSIVYELLWF 65

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  HGV+IWDEWAD  GELGP+YGVQWRSWP  DG  IDQIS ++Q+LR D
Sbjct: 66  LRGDSNVGWLREHGVTIWDEWADPQGELGPVYGVQWRSWPTPDGTHIDQISQVLQTLRTD 125

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 126 PDSRRMIVSAWNVAELDRMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 185

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A     + GEFI T GD H+Y+NH EQ   QL R P   P++ + P    L  +
Sbjct: 186 LLTHMVAQQTELEPGEFIWTGGDCHIYDNHVEQVTEQLGREPYPFPRLELRP-APSLFDY 244

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+ED T+  Y  H AI A V+V
Sbjct: 245 RFEDVTVTDYRHHPAIKAPVAV 266


>gi|260599168|ref|YP_003211739.1| thymidylate synthase [Cronobacter turicensis z3032]
 gi|260218345|emb|CBA33364.1| Thymidylate synthase [Cronobacter turicensis z3032]
          Length = 264

 Score =  347 bits (889), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 157/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+  V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMNKVLHEGAQKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  L+
Sbjct: 61  WFLKGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRSWTAPDGRHIDQLETVINQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL+R PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLEPGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|161611264|ref|YP_295138.2| thymidylate synthase [Ralstonia eutropha JMP134]
          Length = 264

 Score =  347 bits (889), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDLS+GFP++TTKK+H KS++ ELL
Sbjct: 1   MKQYLDFMRHVFEHGTEKADRTGTGTRSVFGYQMRFDLSQGFPVVTTKKLHLKSIILELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GVSIWDEWAD++GELGP+YG QWRSWP  DG  +DQI+ ++  +R
Sbjct: 61  WFLQGSTNVRWLQENGVSIWDEWADENGELGPVYGSQWRSWPTPDGRHVDQITDLLNQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ENPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD H+Y+NH+EQ   QLSR P  LP + I      + 
Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHIYSNHYEQVQTQLSREPLPLPTLKIVRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF L  Y+ H AI A V+V
Sbjct: 241 DYRYEDFELVGYQSHPAIKAPVAV 264


>gi|300718158|ref|YP_003742961.1| Thymidylate synthase [Erwinia billingiae Eb661]
 gi|299063994|emb|CAX61114.1| Thymidylate synthase [Erwinia billingiae Eb661]
          Length = 264

 Score =  347 bits (889), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S+VHELL
Sbjct: 1   MKQYLDLMRKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + V+IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+++++Q L+
Sbjct: 61  WFLNGDTNTAYLQENKVTIWDEWADENGDLGPVYGKQWRSWGAADGREIDQLTNVLQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQTHLQLTREPRPLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPPIKAPVAI 264


>gi|225010453|ref|ZP_03700924.1| Thymidylate synthase [Flavobacteria bacterium MS024-3C]
 gi|225005282|gb|EEG43233.1| Thymidylate synthase [Flavobacteria bacterium MS024-3C]
          Length = 274

 Score =  346 bits (888), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 164/277 (59%), Positives = 208/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL HV+K G  + DRTG GT S FGYQMRF+LSKGFP++TTKK+H KS+V+ELL
Sbjct: 1   MKQYHDLLNHVLKNGVQKGDRTGTGTLSVFGYQMRFNLSKGFPMVTTKKLHLKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD +G+LGP+YG QWR+W   +G  IDQI  ++QS++
Sbjct: 61  WFLKGDTNIGYLQENGVRIWNEWADSNGDLGPVYGKQWRNW---NGEEIDQIKEVIQSIK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH  FQFYV  GKLSCQLYQRS
Sbjct: 118 ENPNSRRMIVSAWNPSVLPDPKTSFEENVAKGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G + G+FIHT GD H+YNNH EQ +LQLSR+P+ L
Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGLEAGDFIHTFGDAHIYNNHMEQIELQLSRTPKDL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP I D+  F +EDFTL +Y+PH  I   V++
Sbjct: 238 PKMTLNPEIKDIFDFDFEDFTLENYDPHPHIKGAVAI 274


>gi|329296900|ref|ZP_08254236.1| thymidylate synthase [Plautia stali symbiont]
          Length = 264

 Score =  346 bits (888), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+++ DRTG GT S FG+QMRF+L  GFPL+TTKKVH +S++HELL
Sbjct: 1   MKQYLDLMQHVLNEGAEKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKVHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+++ YL  + V+IWDEWAD++G+LGP+YG QWRSW    G  IDQIS +++ L+
Sbjct: 61  WFLKGDTSIGYLKENKVTIWDEWADENGDLGPVYGKQWRSWGKASGEEIDQISKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL+R PR LP+++I      + 
Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH AI A V+V
Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264


>gi|170739398|ref|YP_001768053.1| thymidylate synthase [Methylobacterium sp. 4-46]
 gi|168193672|gb|ACA15619.1| Thymidylate synthase [Methylobacterium sp. 4-46]
          Length = 264

 Score =  346 bits (888), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 158/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLR ++  G ++ DRTG GT S FG+QMRFDL++GFPL+TTK++H KS++HELL
Sbjct: 1   MRAYHDLLRRILDDGVEKHDRTGTGTLSVFGHQMRFDLAEGFPLVTTKRLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  +GV+IWDEWAD+ G+LGP+YG QWRSW   DG  +DQI+ ++  +R
Sbjct: 61  WFLAGDTNVAYLQSNGVTIWDEWADEHGDLGPVYGKQWRSWAKPDGGSLDQIAWVLDEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWN A +D+MAL PCHCLFQFYV  G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNPADLDRMALAPCHCLFQFYVAQGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V+    G+F+HTLGD HLY NH  QA  QL+R  R LPQ+ +NP +  L 
Sbjct: 181 YALLTAMMAQVLDLVPGDFVHTLGDAHLYVNHVAQARQQLARDHRPLPQLRLNPQVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR++D  L  Y+PH AI A V+V
Sbjct: 241 DFRHDDVVLEGYDPHPAIRAPVAV 264


>gi|299530475|ref|ZP_07043895.1| thymidylate synthase [Comamonas testosteroni S44]
 gi|298721451|gb|EFI62388.1| thymidylate synthase [Comamonas testosteroni S44]
          Length = 282

 Score =  346 bits (888), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY   +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF
Sbjct: 20  QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 79

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           LRGDSNV +L   G +IWDEWADK  G+LGP+YGVQWRSWP  DG  +DQI+ +V+ L++
Sbjct: 80  LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLKS 139

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR IVSAWNVA +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY
Sbjct: 140 NPDSRRIIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 199

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA   G + G+FI T GD H+YNNHFEQ   QLSR P   P + I      +  
Sbjct: 200 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPASIFD 259

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + YEDF +  Y+ HA I A V+V
Sbjct: 260 YEYEDFEVLDYQHHAGIKAPVAV 282


>gi|330831181|ref|YP_004394133.1| Thymidylate synthase [Aeromonas veronii B565]
 gi|328806317|gb|AEB51516.1| Thymidylate synthase [Aeromonas veronii B565]
          Length = 264

 Score =  346 bits (888), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL
Sbjct: 1   MRAYLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG+VIDQI   V  ++
Sbjct: 61  WFLNGDTNTAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAADGSVIDQIQKAVDDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+F+ T GDVHLY+NH EQ  LQLSR PR LP ++I      + 
Sbjct: 181 YALLTHMMAQQCNLEVGDFVWTGGDVHLYSNHMEQTALQLSREPRPLPTLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+PH  I A V++
Sbjct: 241 DYKFEDFEIEGYDPHPGIKAPVAI 264


>gi|156932697|ref|YP_001436613.1| thymidylate synthase [Cronobacter sakazakii ATCC BAA-894]
 gi|166231698|sp|A7MR31|TYSY_ENTS8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|156530951|gb|ABU75777.1| hypothetical protein ESA_00482 [Cronobacter sakazakii ATCC BAA-894]
          Length = 264

 Score =  346 bits (888), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+  V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMNKVLHEGAQKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  L+
Sbjct: 61  WFLKGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRSWATPDGRHIDQLETVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEPGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|50954682|ref|YP_061970.1| thymidylate synthase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|62901289|sp|Q6AFI0|TYSY_LEIXX RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|50951164|gb|AAT88865.1| thymidylate synthase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 269

 Score =  346 bits (887), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/261 (63%), Positives = 197/261 (75%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  GS + DRTG GTRS FG Q+RFDL+ GFPL+TTK+VH+KS+ +ELLWFL
Sbjct: 9   YEDLLRDVLANGSHKSDRTGTGTRSVFGRQLRFDLADGFPLITTKRVHFKSIAYELLWFL 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +GVSIWDEWAD+ GELGP+YGVQWRSWP  DG  IDQI  +V +LR DP
Sbjct: 69  RGDSNVGWLRENGVSIWDEWADERGELGPVYGVQWRSWPSPDGTHIDQIQQVVDTLRRDP 128

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNVA I  MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 129 DSRRIIVSAWNVADIPDMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 188

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT+M+A  +G + GEF+ T GDVH+Y+NH EQ + QLSR+P   P +        +  +R
Sbjct: 189 LTLMVAQQVGLEPGEFVWTGGDVHIYDNHIEQVNEQLSRNPFPAPALRFARRPESVFDYR 248

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YEDF L  Y  H AI A V+V
Sbjct: 249 YEDFVLEGYRHHPAIRAAVAV 269


>gi|271499466|ref|YP_003332491.1| thymidylate synthase [Dickeya dadantii Ech586]
 gi|270343021|gb|ACZ75786.1| thymidylate synthase [Dickeya dadantii Ech586]
          Length = 264

 Score =  346 bits (887), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YLH + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+ ++++ L+
Sbjct: 61  WFLNGDTNVGYLHDNKVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLQTVLRQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYNNHLEQTRLQLSREPRPLPKLVIKRRPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V+V
Sbjct: 241 DYRFEDFDIEGYDPHPAIKAPVAV 264


>gi|319779101|ref|YP_004130014.1| Thymidylate synthase [Taylorella equigenitalis MCE9]
 gi|317109125|gb|ADU91871.1| Thymidylate synthase [Taylorella equigenitalis MCE9]
          Length = 264

 Score =  346 bits (887), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D +RHV + G D+ DRTG GT+S F YQMRFDL +GFP++TTKK+H KS+++ELL
Sbjct: 1   MRQYEDFMRHVFETGVDKTDRTGTGTKSVFAYQMRFDLQEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSN  +L   GVSIW+EWAD++GELGPIYGVQWRSWP  DG  IDQIS +V  ++
Sbjct: 61  WFLRGDSNAKWLQERGVSIWNEWADENGELGPIYGVQWRSWPAPDGTKIDQISQVVDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV LI +M LPPCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGLIPQMKLPPCHAFFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A       GEFI T GD H+Y+NHFEQ   QLSR P   P++ I      + 
Sbjct: 181 YSLLTHMIAQQCNLDVGEFIWTGGDCHIYSNHFEQVKEQLSRDPYPYPKLHIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+ H  I A V+V
Sbjct: 241 DYEFEDFEVMDYQHHPHIKAPVAV 264


>gi|326334727|ref|ZP_08200934.1| thymidylate synthase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325693177|gb|EGD35109.1| thymidylate synthase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 274

 Score =  345 bits (886), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 160/277 (57%), Positives = 200/277 (72%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL H++  G  + DRTG GT S FGYQ R +L +GFPLLTTKK+H KSV++ELL
Sbjct: 1   MQAYKDLLNHILTHGHSKDDRTGTGTISVFGYQFRCNLQEGFPLLTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  HGV IW+EWAD+ G+LGPIYG QWR+W   +   IDQI+ ++ +L+
Sbjct: 61  WFLRGDTNIHYLTEHGVRIWNEWADEKGDLGPIYGAQWRNW---NNEGIDQIAQVLHTLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++             +K ALPPCH LFQFYV  GKLSCQLYQRS
Sbjct: 118 TNPDSRRMVVSAWNPSVMPDTSVSFAENVAHNKAALPPCHALFQFYVMEGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASY+LLT M+A V G Q G+F+H+ GD+H+Y NH EQ +LQLSR PR L
Sbjct: 178 ADAFLGVPFNIASYALLTQMMAHVTGLQVGDFVHSFGDLHIYKNHLEQVELQLSREPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +F Y DFTL  Y+P+  I  KVSV
Sbjct: 238 PTMKLNPQVKDLFAFDYPDFTLEGYDPYPTIKGKVSV 274


>gi|238918743|ref|YP_002932257.1| thymidylate synthase, [Edwardsiella ictaluri 93-146]
 gi|259550777|sp|C5BH86|TYSY_EDWI9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|238868311|gb|ACR68022.1| thymidylate synthase, putative [Edwardsiella ictaluri 93-146]
          Length = 264

 Score =  345 bits (886), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRKVLAEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++NVSYLH + V+IWDEWAD +G+LGP+YG QWR+W   DG  +DQIS +++ LR
Sbjct: 61  WFLNGETNVSYLHENNVTIWDEWADDNGDLGPVYGKQWRAWGCADGRQVDQISQVMEQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MAL PCH  FQFYV +G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QEPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A  +  Q G+F+ T GD HLY+NH EQ  LQL+R PR LP++++      + 
Sbjct: 181 YALLVHMMAQQLDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRALPRLVLARRPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V+V
Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAV 264


>gi|218550075|ref|YP_002383866.1| thymidylate synthase [Escherichia fergusonii ATCC 35469]
 gi|226713170|sp|B7LNI2|TYSY_ESCF3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|218357616|emb|CAQ90255.1| thymidylate synthetase [Escherichia fergusonii ATCC 35469]
 gi|324114883|gb|EGC08849.1| thymidylate synthase [Escherichia fergusonii B253]
 gi|325498403|gb|EGC96262.1| thymidylate synthase [Escherichia fergusonii ECD227]
          Length = 264

 Score =  345 bits (886), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR+LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRSLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|313835878|gb|EFS73592.1| thymidylate synthase [Propionibacterium acnes HL037PA2]
 gi|314927122|gb|EFS90953.1| thymidylate synthase [Propionibacterium acnes HL044PA1]
 gi|314970765|gb|EFT14863.1| thymidylate synthase [Propionibacterium acnes HL037PA3]
 gi|328906030|gb|EGG25805.1| thymidylate synthase [Propionibacterium sp. P08]
          Length = 270

 Score =  345 bits (885), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 162/270 (60%), Positives = 204/270 (75%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+ ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLQRILDEGVRREDRTGTGTLSVFGHQMIFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+ V +LH + + IWDEWAD++G+LGPIYG QWRSWPD DG  IDQI+ +++ +R
Sbjct: 61  WFLRGDTTVGWLHDNAIHIWDEWADENGDLGPIYGRQWRSWPDGDGGTIDQIAKVIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA +D+MALPPCH LFQFYV   D G+   LSCQLYQRSGD FLG+
Sbjct: 121 TNPWSRRHIVSAWNVAEVDEMALPPCHTLFQFYVTPDDRGEPTWLSCQLYQRSGDTFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD HLY NH +QA  QL R PR LP + +NP
Sbjct: 181 PFNIASYALLTYLVASVTGLKPLRFVHTLGDAHLYLNHLDQAHEQLKREPRHLPTLTVNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 241 NVRDIDGFELSDLTLTGYDPYPALPAPIAV 270


>gi|311278228|ref|YP_003940459.1| thymidylate synthase [Enterobacter cloacae SCF1]
 gi|308747423|gb|ADO47175.1| thymidylate synthase [Enterobacter cloacae SCF1]
          Length = 264

 Score =  345 bits (885), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGAQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + V+IWDEWAD+ G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLKGDTNVAYLHENNVTIWDEWADEQGNLGPVYGKQWRAWPTPDGRHIDQITTVINQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCSLEVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|237729788|ref|ZP_04560269.1| thymidylate synthetase [Citrobacter sp. 30_2]
 gi|226908394|gb|EEH94312.1| thymidylate synthetase [Citrobacter sp. 30_2]
          Length = 264

 Score =  345 bits (885), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|329889820|ref|ZP_08268163.1| thymidylate synthase [Brevundimonas diminuta ATCC 11568]
 gi|328845121|gb|EGF94685.1| thymidylate synthase [Brevundimonas diminuta ATCC 11568]
          Length = 285

 Score =  345 bits (885), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 164/262 (62%), Positives = 198/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LLR ++  G  R DRTG GT   FG QMRFDLSKGFPLLTTKK+H +S+  ELLWF
Sbjct: 25  QYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPLLTTKKLHTRSIFIELLWF 84

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG++N+++L  +GVSIWDEWAD DG+LGP+YG QWRSW   +G  IDQI  +V  L+ +
Sbjct: 85  LRGETNIAWLKDNGVSIWDEWADADGDLGPVYGKQWRSWAAPNGASIDQIQKLVHGLKTN 144

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRRHIVSAWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 145 PNSRRHIVSAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 204

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT MLA V+G + G+F+HT GD HLY NH EQA+LQLSR+P  LP + +  +  DL  F
Sbjct: 205 LLTYMLAKVVGLEPGDFVHTFGDAHLYLNHLEQAELQLSRAPLPLPTLSV-ADKDDLFGF 263

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
              DF L  Y+    I A V+V
Sbjct: 264 ELSDFVLNDYQSWPHIKAPVAV 285


>gi|241662502|ref|YP_002980862.1| thymidylate synthase [Ralstonia pickettii 12D]
 gi|240864529|gb|ACS62190.1| thymidylate synthase [Ralstonia pickettii 12D]
          Length = 280

 Score =  345 bits (885), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L  GFPL+TTKKVH KS+V+ELL
Sbjct: 17  MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 76

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGP+YG QWRSWP  +G  IDQI+ ++  ++
Sbjct: 77  WFLQGSTNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 136

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 137 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 196

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G   G+F+ T GD HLYNNHFEQ + QL+R P  LP++ I      + 
Sbjct: 197 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLAREPLPLPKLHIKRKPESIF 256

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF +  Y+ H AI A V+V
Sbjct: 257 DYQYEDFEIVGYQSHPAIKAPVAV 280


>gi|331654309|ref|ZP_08355309.1| thymidylate synthase [Escherichia coli M718]
 gi|331047691|gb|EGI19768.1| thymidylate synthase [Escherichia coli M718]
          Length = 264

 Score =  345 bits (885), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLRGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|323946537|gb|EGB42561.1| thymidylate synthase [Escherichia coli H120]
          Length = 264

 Score =  345 bits (885), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHALFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|88802703|ref|ZP_01118230.1| thymidylate synthase [Polaribacter irgensii 23-P]
 gi|88781561|gb|EAR12739.1| thymidylate synthase [Polaribacter irgensii 23-P]
          Length = 274

 Score =  345 bits (885), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 154/277 (55%), Positives = 207/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLVKHVLESGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  +GV IW+ WAD++G+LGP+YG QWR+W   D   IDQ+  ++ +L+
Sbjct: 61  WFIKGDTNIKYLQDNGVKIWNSWADENGDLGPVYGHQWRNWNSDD---IDQLKEVITTLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +V+AWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 TNPNSRRMMVAAWNPSVMPDTAASFSDNVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+YNNH EQ +LQLSR  R L
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYNNHIEQLELQLSREIRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +N  I D+ +F +EDF L  Y PH  I  KV++
Sbjct: 238 PKMKLNAAIEDIENFTFEDFELLEYNPHPHIKGKVAI 274


>gi|296104486|ref|YP_003614632.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295058945|gb|ADF63683.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 264

 Score =  345 bits (885), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|283786527|ref|YP_003366392.1| thymidylate synthase [Citrobacter rodentium ICC168]
 gi|282949981|emb|CBG89609.1| thymidylate synthase [Citrobacter rodentium ICC168]
          Length = 264

 Score =  345 bits (885), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTKKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++++ L+
Sbjct: 61  WFLQGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVMKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHLEQTRLQLSREPRALPKLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|294084290|ref|YP_003551048.1| thymidylate synthase protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663863|gb|ADE38964.1| thymidylate synthase protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 264

 Score =  345 bits (885), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G DR DRTG GTR+ FG+QMRFDL+ GFP+LTTKK+H KS++HELL
Sbjct: 1   MQQYLDLLARVMDEGIDRDDRTGTGTRAVFGHQMRFDLADGFPVLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR W   DG  IDQ++ +++ +R
Sbjct: 61  WFISGDTNIRYLQDNGVSIWDEWADENGDLGPVYGQQWRRWKTPDGAEIDQLAELIRMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR ++SAWN A I  MALPPCHCLFQF V +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ETPTSRRLMLSAWNPADIPNMALPPCHCLFQFQVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A +   + G F+HTLGD H+Y NHF+QA LQL+R+P  LP+++I+    D+ 
Sbjct: 181 YALLTHMIAVICDLEAGTFVHTLGDAHIYANHFDQARLQLTRTPGALPKLLIHNRPKDID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF +  Y   A I A ++V
Sbjct: 241 GFKFEDFEIIDYNAQAHISAPIAV 264


>gi|295097375|emb|CBK86465.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 264

 Score =  345 bits (885), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|123443517|ref|YP_001007490.1| thymidylate synthase [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|166231744|sp|A1JPC9|TYSY_YERE8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|122090478|emb|CAL13346.1| thymidylate synthase [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 264

 Score =  345 bits (885), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S +VQ L+
Sbjct: 61  WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKSKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A +++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264


>gi|223937832|ref|ZP_03629732.1| Thymidylate synthase [bacterium Ellin514]
 gi|223893438|gb|EEF59899.1| Thymidylate synthase [bacterium Ellin514]
          Length = 264

 Score =  345 bits (884), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  LL+ V++ G  + DRTG GT + FG Q RF L+ GFP++TTKK+H KS+++ELL
Sbjct: 1   MIQYHQLLKLVLEQGKFKPDRTGTGTYAVFGAQARFPLADGFPVVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL+ +GV+IWDEWAD +G LG +YG QW  W   DG  I+QI  ++  ++
Sbjct: 61  WFLRGDTNVKYLNENGVTIWDEWADTEGNLGRVYGAQWCDWRTADGRSINQIDEVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRRHIVSAWNV  I++MALPPCH LFQF+V +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KTPDSRRHIVSAWNVGEIERMALPPCHALFQFFVQDGELSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G F+HT GD+HLY+NH EQA LQLSR P+ LPQM +NP I ++ 
Sbjct: 181 YALLTMMVAQVCDLKPGTFVHTFGDLHLYSNHLEQAKLQLSREPKQLPQMKLNPAIKNIH 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y+PH  I A ++V
Sbjct: 241 EFKFEDFQLAGYDPHPGIKAPIAV 264


>gi|85059955|ref|YP_455657.1| thymidylate synthase [Sodalis glossinidius str. 'morsitans']
 gi|123738935|sp|Q2NRH3|TYSY_SODGM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|84780475|dbj|BAE75252.1| thymidylate synthase [Sodalis glossinidius str. 'morsitans']
          Length = 264

 Score =  345 bits (884), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V   G+ + DRTG GT S FG+QMRFDL +GF L+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMRRVRAQGTPKADRTGTGTLSIFGHQMRFDLRQGFLLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL ++ VSIWDEWAD +G+LGP+YG QWR+W   DG  IDQ++ +V+ L+
Sbjct: 61  WFLNGDTNIAYLQQNNVSIWDEWADDNGDLGPVYGRQWRAWGTSDGRQIDQLAEVVRQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH LFQFYV NG LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHALFQFYVANGTLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  MLA     Q G+F+ T GD HLY+NH +QADLQL+R P  LPQ++I      L 
Sbjct: 181 YALLVHMLAQQCDLQVGDFVWTGGDTHLYSNHLQQADLQLTRDPLPLPQLLIKRRPATLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF L  Y+PH AI A V+V
Sbjct: 241 DYRFEDFELTGYDPHPAIKAPVAV 264


>gi|157148372|ref|YP_001455691.1| thymidylate synthase [Citrobacter koseri ATCC BAA-895]
 gi|166231695|sp|A8AP42|TYSY_CITK8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157085577|gb|ABV15255.1| hypothetical protein CKO_04194 [Citrobacter koseri ATCC BAA-895]
          Length = 264

 Score =  345 bits (884), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLREGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + V+IWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVTIWDEWADENGNLGPVYGKQWRAWPAPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|83858879|ref|ZP_00952401.1| thymidylate synthase [Oceanicaulis alexandrii HTCC2633]
 gi|83853702|gb|EAP91554.1| thymidylate synthase [Oceanicaulis alexandrii HTCC2633]
          Length = 279

 Score =  345 bits (884), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 156/261 (59%), Positives = 195/261 (74%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  +++ G D+ DRTG GTR  FG Q+R DLS GFPLLTTKKVH+KS+  ELLWF+
Sbjct: 19  YLDLLHEIMETGEDQTDRTGTGTRGVFGRQIRCDLSDGFPLLTTKKVHFKSIAVELLWFI 78

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G +NV +L   GVSIWDEWAD++GELGP+YG QWR W   DG  IDQ++ +++ +R  P
Sbjct: 79  KGITNVKWLQERGVSIWDEWADENGELGPVYGKQWRRWEGPDGREIDQLAGLIEQIRQSP 138

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHI+SAWN A +  MALPPCH LFQF V  G+L  QLYQRS D+FLG+PFNIASY+L
Sbjct: 139 DSRRHIISAWNPADVPSMALPPCHTLFQFKVLGGRLHLQLYQRSADMFLGVPFNIASYAL 198

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           L  M+A   G++ GE++HT GD H+Y+NHF+Q   QLSR PR LP + +NP I DL +F 
Sbjct: 199 LLAMVAQATGYEPGEYVHTFGDAHIYSNHFDQVREQLSRDPRPLPTLKLNPEITDLFAFE 258

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED TL  Y+PHA I A V+V
Sbjct: 259 YEDITLEGYDPHARISAPVAV 279


>gi|323978558|gb|EGB73640.1| thymidylate synthase [Escherichia coli TW10509]
          Length = 264

 Score =  345 bits (884), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q +LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTNLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|220920733|ref|YP_002496034.1| thymidylate synthase [Methylobacterium nodulans ORS 2060]
 gi|254790243|sp|B8IF20|TYSY_METNO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219945339|gb|ACL55731.1| thymidylate synthase [Methylobacterium nodulans ORS 2060]
          Length = 264

 Score =  345 bits (884), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLR ++  G  + DRTG GT S FG+QMRFDL++GFPL+TTK++H KS++HELL
Sbjct: 1   MRAYHDLLRRILDDGVAKHDRTGTGTLSVFGHQMRFDLAEGFPLVTTKRLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  +GV+IWDEWAD+ G+LGP+YG QWRSW   DG  +DQI+ ++  +R
Sbjct: 61  WFLAGDTNVAYLQSNGVTIWDEWADEHGDLGPVYGRQWRSWAKPDGGSVDQIAWVLDEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWN A +D+MAL PCHCLFQFY+   +LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNPADLDRMALAPCHCLFQFYIAERRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V+  + G+F+HTLGD HLY+NH  QA  QL+R  R LP++ +NP +  L 
Sbjct: 181 YALLTAMMAHVLDLEPGDFVHTLGDAHLYSNHVAQARQQLARDERPLPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRY+D  +  Y+PH AI A V+V
Sbjct: 241 DFRYDDVVIEGYDPHPAIRAPVAV 264


>gi|145297746|ref|YP_001140587.1| thymidylate synthase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166231686|sp|A4SIW7|TYSY_AERS4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|142850518|gb|ABO88839.1| thymidylate synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 264

 Score =  345 bits (884), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 158/264 (59%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL
Sbjct: 1   MRVYLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL   GVSIWDEWAD++G+LGP+YG QWRSWP  DG VIDQI   V  ++
Sbjct: 61  WFLNGDTNTAYLKEQGVSIWDEWADENGDLGPVYGAQWRSWPAADGAVIDQIQRAVDDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+F+ T GDVHLY+NH EQ  LQLSR PR LPQ+ I      + 
Sbjct: 181 YALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLSREPRPLPQLAIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEILGYDPHPGIKAPVAI 264


>gi|188534879|ref|YP_001908676.1| thymidylate synthase [Erwinia tasmaniensis Et1/99]
 gi|188029921|emb|CAO97805.1| Thymidylate synthase [Erwinia tasmaniensis Et1/99]
          Length = 264

 Score =  344 bits (883), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLALMQHVLEQGTPKDDRTGTGTLSVFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG+ IDQ+S +++ L+
Sbjct: 61  WFLKGETNIAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGAADGHQIDQLSKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +D+MAL PCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL R PR LP+++I      L 
Sbjct: 181 YALLVHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH AI A V++
Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAI 264


>gi|238751480|ref|ZP_04612972.1| Thymidylate synthase [Yersinia rohdei ATCC 43380]
 gi|238710347|gb|EEQ02573.1| Thymidylate synthase [Yersinia rohdei ATCC 43380]
          Length = 264

 Score =  344 bits (883), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S++VQ L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A +++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPIAI 264


>gi|157372056|ref|YP_001480045.1| thymidylate synthase [Serratia proteamaculans 568]
 gi|166991231|sp|A8GIH7|TYSY_SERP5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157323820|gb|ABV42917.1| Thymidylate synthase [Serratia proteamaculans 568]
          Length = 264

 Score =  344 bits (883), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMNKVLAEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  + VSIWDEWAD++G LGP+YG QWR+W   DG  IDQ+++++  L+
Sbjct: 61  WFLNGDTNVAYLKENKVSIWDEWADENGNLGPVYGKQWRAWGTADGRQIDQLTTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTQLQLTREPRALPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|269138061|ref|YP_003294761.1| thymidylate synthase [Edwardsiella tarda EIB202]
 gi|267983721|gb|ACY83550.1| thymidylate synthase [Edwardsiella tarda EIB202]
 gi|304558105|gb|ADM40769.1| Thymidylate synthase [Edwardsiella tarda FL6-60]
          Length = 264

 Score =  344 bits (883), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRKVLAEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++NV YLH + V+IWDEWAD++G+LGP+YG QWR+W   DG  +DQI  +++ LR
Sbjct: 61  WFLNGETNVKYLHENNVTIWDEWADENGDLGPVYGKQWRAWGCADGRQVDQIRQVMEQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A  +  Q G+F+ T GD HLY+NH EQ  LQL+R PR LP++++      + 
Sbjct: 181 YALLVHMMAQQLDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRALPRLVLARRPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V+V
Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAV 264


>gi|332160563|ref|YP_004297140.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318606963|emb|CBY28461.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325664793|gb|ADZ41437.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 264

 Score =  344 bits (883), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S +VQ L+
Sbjct: 61  WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A +++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264


>gi|283835406|ref|ZP_06355147.1| thymidylate synthase [Citrobacter youngae ATCC 29220]
 gi|291068577|gb|EFE06686.1| thymidylate synthase [Citrobacter youngae ATCC 29220]
          Length = 264

 Score =  344 bits (883), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH +Q  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|228471682|ref|ZP_04056455.1| thymidylate synthase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276835|gb|EEK15530.1| thymidylate synthase [Capnocytophaga gingivalis ATCC 33624]
          Length = 274

 Score =  344 bits (883), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 157/277 (56%), Positives = 200/277 (72%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL H++ +G  + DRTG GT S FGYQ+R +L +GFPLLTTKK+H KSV++ELL
Sbjct: 1   MQAYKDLLNHILTYGHSKDDRTGTGTISVFGYQLRHNLQEGFPLLTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  HGV IW+EWAD+ G+LGP+YG QWR+W   +G  IDQI+ ++ +L+
Sbjct: 61  WFLRGDTNIHYLTEHGVRIWNEWADEQGDLGPVYGAQWRNW---NGEGIDQITEVLHTLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++             +K ALPPCH LFQFYV  G+LSCQLYQRS
Sbjct: 118 TNPDSRRMVVSAWNPSVMPDTSLSFAENVANNKAALPPCHALFQFYVMEGRLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASY+LLT M+A V G Q G+F+H+ GD+H+Y NH EQ  LQLSR PR L
Sbjct: 178 ADAFLGVPFNIASYALLTQMMAHVTGLQVGDFVHSFGDLHIYKNHLEQVKLQLSREPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +N  + DL +F Y DF L  Y+P+  I  KVSV
Sbjct: 238 PTMKLNEKVTDLFAFDYSDFILEGYDPYPTIKGKVSV 274


>gi|238764009|ref|ZP_04624965.1| Thymidylate synthase [Yersinia kristensenii ATCC 33638]
 gi|238697826|gb|EEP90587.1| Thymidylate synthase [Yersinia kristensenii ATCC 33638]
          Length = 264

 Score =  344 bits (882), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S +VQ L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q +LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHIDQTNLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A +++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264


>gi|292487189|ref|YP_003530061.1| thymidylate synthetase [Erwinia amylovora CFBP1430]
 gi|292900435|ref|YP_003539804.1| thymidylate synthase [Erwinia amylovora ATCC 49946]
 gi|291200283|emb|CBJ47411.1| thymidylate synthase [Erwinia amylovora ATCC 49946]
 gi|291552608|emb|CBA19653.1| thymidylate synthetase [Erwinia amylovora CFBP1430]
 gi|312171289|emb|CBX79548.1| thymidylate synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 264

 Score =  344 bits (882), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLALMQHVLEQGAPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+S +++ L+
Sbjct: 61  WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +D+MAL PCH LFQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SDPDSRRMIVSAWNVGELDQMALAPCHALFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL R P  LP+++I      L 
Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPHALPKLLIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH AI A V+V
Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAV 264


>gi|303257367|ref|ZP_07343381.1| thymidylate synthase [Burkholderiales bacterium 1_1_47]
 gi|302860858|gb|EFL83935.1| thymidylate synthase [Burkholderiales bacterium 1_1_47]
          Length = 267

 Score =  344 bits (882), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 160/262 (61%), Positives = 196/262 (74%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY   +R V + G ++ DRTGVGTRS FGYQMRF+L +GFPL+TTKK+H +S++HELLWF
Sbjct: 6   QYETFMRDVFEHGVEKSDRTGVGTRSMFGYQMRFNLQEGFPLVTTKKLHLRSIIHELLWF 65

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L GDSNV YLH + V+IWDEWAD +G+LGPIYGVQWR W   DG  IDQIS+++  ++ +
Sbjct: 66  LHGDSNVKYLHDNKVTIWDEWADANGDLGPIYGVQWRHWKTSDGGYIDQISNLIHQIKTN 125

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNV  IDKMALPPCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIASYS
Sbjct: 126 PDSRRLVVSAWNVGEIDKMALPPCHMFFQFYVAQGKLSCQLYQRSCDIFLGVPFNIASYS 185

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A       G+FI T GD H+YNNHFEQ  LQLSR PR  P++II      +  +
Sbjct: 186 LLTHMIAQQCDLDVGDFIWTGGDCHIYNNHFEQVKLQLSREPRPYPKLIIKRRPDSIFDY 245

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            +EDF +  Y+P  AI A ++V
Sbjct: 246 NFEDFEIVDYDPWPAIKAPIAV 267


>gi|309781084|ref|ZP_07675822.1| thymidylate synthase [Ralstonia sp. 5_7_47FAA]
 gi|308920150|gb|EFP65809.1| thymidylate synthase [Ralstonia sp. 5_7_47FAA]
          Length = 264

 Score =  343 bits (881), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L  GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGP+YG QWRSWP  +G  IDQI+ ++  ++
Sbjct: 61  WFLQGATNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G   G+F+ T GD HLYNNHFEQ   QL+R P  LP++ I      + 
Sbjct: 181 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVQTQLAREPLPLPKLHIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF +  Y+ H AI A V+V
Sbjct: 241 DYQYEDFEIVGYQSHPAIKAPVAV 264


>gi|290476668|ref|YP_003469573.1| thymidylate synthetase [Xenorhabdus bovienii SS-2004]
 gi|289176006|emb|CBJ82809.1| thymidylate synthetase [Xenorhabdus bovienii SS-2004]
          Length = 264

 Score =  343 bits (881), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEDGTAKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ++ +++ L+
Sbjct: 61  WFLNGDTNTQYLRDNNVTIWDEWADENGDLGPVYGKQWRAWSSADGRQIDQLAKVLEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +DKMAL PCH  FQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAEGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  MLA     + G+F+ T GD HLY+NH EQ  LQLSR PRTLP++II      L 
Sbjct: 181 YALLVHMLAQQCDLEVGDFVWTGGDTHLYSNHLEQTKLQLSREPRTLPKLIIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIVDYDPHPGIKAPVAI 264


>gi|270264851|ref|ZP_06193115.1| thymidylate synthetase [Serratia odorifera 4Rx13]
 gi|270041149|gb|EFA14249.1| thymidylate synthetase [Serratia odorifera 4Rx13]
          Length = 264

 Score =  343 bits (881), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMNKVLAEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  + VSIWDEWAD+ G+LGP+YG QWR+W   DG  IDQ+S++++ L+
Sbjct: 61  WFLNGDTNVAYLRENNVSIWDEWADEHGDLGPVYGKQWRAWGAADGRQIDQLSNVLKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTRLQLTREPRALPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|333000932|gb|EGK20502.1| thymidylate synthase [Shigella flexneri K-272]
 gi|333015566|gb|EGK34905.1| thymidylate synthase [Shigella flexneri K-227]
          Length = 264

 Score =  343 bits (881), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YTLLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|254821236|ref|ZP_05226237.1| thymidylate synthase [Mycobacterium intracellulare ATCC 13950]
          Length = 266

 Score =  343 bits (881), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 164/261 (62%), Positives = 198/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG Q+R+DLS GFPLLTTKKVH KSVV+ELLWFL
Sbjct: 7   YEDLLRLVLDEGTAKSDRTGTGTRSLFGRQLRYDLSAGFPLLTTKKVHLKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV++LH HGV+IWDEWA   G+LGPIYGVQWRSWP   G  +DQIS+ +  LR DP
Sbjct: 67  RGDSNVAWLHEHGVTIWDEWASDAGDLGPIYGVQWRSWPTPTGEHVDQISAALDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 NSRRIIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ  LQLSR PR  P++++      +  + 
Sbjct: 187 LTHMMAAQSGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELVLGERD-SIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y D  +R+Y+PH AI A V+V
Sbjct: 246 YGDVVVRNYDPHPAIKAPVAV 266


>gi|882719|gb|AAB40474.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655]
          Length = 264

 Score =  343 bits (881), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVXDGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|330999206|ref|ZP_08322924.1| thymidylate synthase [Parasutterella excrementihominis YIT 11859]
 gi|329575272|gb|EGG56820.1| thymidylate synthase [Parasutterella excrementihominis YIT 11859]
          Length = 267

 Score =  343 bits (881), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 159/262 (60%), Positives = 196/262 (74%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY   +R V + G ++ DRTGVGTRS FGYQMRF+L +GFPL+TTKK+H +S++HELLWF
Sbjct: 6   QYETFMRDVFEHGVEKSDRTGVGTRSMFGYQMRFNLQEGFPLVTTKKLHLRSIIHELLWF 65

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L GDSN+ YLH + V+IWDEWAD +G+LGPIYGVQWR W   DG  IDQIS+++  ++ +
Sbjct: 66  LHGDSNIKYLHDNKVTIWDEWADANGDLGPIYGVQWRHWKTSDGGYIDQISNLIHQIKTN 125

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNV  IDKMALPPCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIASYS
Sbjct: 126 PDSRRLVVSAWNVGEIDKMALPPCHMFFQFYVAQGKLSCQLYQRSCDIFLGVPFNIASYS 185

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A       G+FI T GD H+YNNHFEQ  LQLSR PR  P++II      +  +
Sbjct: 186 LLTHMIAQQCDLDVGDFIWTGGDCHIYNNHFEQVKLQLSREPRPYPKLIIKRRPDSIFDY 245

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            +EDF +  Y+P  AI A ++V
Sbjct: 246 NFEDFEIVDYDPWPAIKAPIAV 267


>gi|238787265|ref|ZP_04631064.1| Thymidylate synthase [Yersinia frederiksenii ATCC 33641]
 gi|238724527|gb|EEQ16168.1| Thymidylate synthase [Yersinia frederiksenii ATCC 33641]
          Length = 264

 Score =  343 bits (881), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLAEGTAKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S++VQ L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVAEGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLIHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTQLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A +++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264


>gi|221066060|ref|ZP_03542165.1| Thymidylate synthase [Comamonas testosteroni KF-1]
 gi|220711083|gb|EED66451.1| Thymidylate synthase [Comamonas testosteroni KF-1]
          Length = 276

 Score =  343 bits (881), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY   +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF
Sbjct: 14  QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           LRGDSNV +L   G +IWDEWADK  G+LGP+YGVQWRSWP  DG  +DQI+ +V+ L++
Sbjct: 74  LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLQS 133

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR IVSAWNVA +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY
Sbjct: 134 NPDSRRIIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 193

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA   G + G+FI T GD H+YNNHFEQ   QLSR P   P + I      +  
Sbjct: 194 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPDSIFG 253

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + YEDF +  Y+ HA I A V+V
Sbjct: 254 YEYEDFEVLDYQHHAGIKAPVAV 276


>gi|16766303|ref|NP_461918.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56414948|ref|YP_152023.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62181510|ref|YP_217927.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161615936|ref|YP_001589901.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167550126|ref|ZP_02343883.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167993498|ref|ZP_02574592.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168231096|ref|ZP_02656154.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168236052|ref|ZP_02661110.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168242768|ref|ZP_02667700.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168463843|ref|ZP_02697760.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168820273|ref|ZP_02832273.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194444087|ref|YP_002042250.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194448836|ref|YP_002046971.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194469951|ref|ZP_03075935.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194735179|ref|YP_002115951.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197248114|ref|YP_002147910.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197261701|ref|ZP_03161775.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197363876|ref|YP_002143513.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198243101|ref|YP_002216974.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|204928268|ref|ZP_03219468.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205353941|ref|YP_002227742.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207858264|ref|YP_002244915.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|238909779|ref|ZP_04653616.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|20455351|sp|Q8ZMA9|TYSY_SALTY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901208|sp|Q5PEN6|TYSY_SALPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|75505581|sp|Q57KB6|TYSY_SALCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036942|sp|A9N2L7|TYSY_SALPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|16421551|gb|AAL21877.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56129205|gb|AAV78711.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62129143|gb|AAX66846.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161365300|gb|ABX69068.1| hypothetical protein SPAB_03733 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402750|gb|ACF62972.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194407140|gb|ACF67359.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194456315|gb|EDX45154.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194710681|gb|ACF89902.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195633626|gb|EDX52040.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197095353|emb|CAR60911.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197211817|gb|ACH49214.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197239956|gb|EDY22576.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197290918|gb|EDY30272.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197937617|gb|ACH74950.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|204322590|gb|EDZ07787.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205273722|emb|CAR38715.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205324734|gb|EDZ12573.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205328467|gb|EDZ15231.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205334514|gb|EDZ21278.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205338222|gb|EDZ24986.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205342942|gb|EDZ29706.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|206710067|emb|CAR34422.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261248135|emb|CBG25970.1| TS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267995141|gb|ACY90026.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301159559|emb|CBW19078.1| Thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312914020|dbj|BAJ37994.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320087427|emb|CBY97192.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321225677|gb|EFX50731.1| Thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|322613402|gb|EFY10343.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322620994|gb|EFY17852.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322624057|gb|EFY20891.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628203|gb|EFY24992.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633322|gb|EFY30064.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636100|gb|EFY32808.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322648813|gb|EFY45260.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655194|gb|EFY51504.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322657975|gb|EFY54243.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664077|gb|EFY60276.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322667045|gb|EFY63217.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673095|gb|EFY69202.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677915|gb|EFY73978.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322681090|gb|EFY77123.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322685686|gb|EFY81680.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322715992|gb|EFZ07563.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323131357|gb|ADX18787.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323194825|gb|EFZ80012.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323196576|gb|EFZ81724.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323205011|gb|EFZ89994.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207788|gb|EFZ92734.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212660|gb|EFZ97477.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214857|gb|EFZ99605.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323230655|gb|EGA14773.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323234995|gb|EGA19081.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323239033|gb|EGA23083.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323244609|gb|EGA28615.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323247224|gb|EGA31190.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323256400|gb|EGA40136.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323262424|gb|EGA45980.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323267480|gb|EGA50964.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323269116|gb|EGA52571.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326624741|gb|EGE31086.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326629055|gb|EGE35398.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332989869|gb|AEF08852.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 264

 Score =  343 bits (881), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|1065359|pdb|1TLC|A Chain A, Thymidylate Synthase Complexed With Dgmp And Folate Analog
           1843u89
 gi|1065360|pdb|1TLC|B Chain B, Thymidylate Synthase Complexed With Dgmp And Folate Analog
           1843u89
 gi|1310775|pdb|1TSD|A Chain A, Thymidylate Synthase Complex With 2'-Deoxyuridine 5'-
           Monophosphate (Dump) And Folate Analog 1843u89
 gi|1310776|pdb|1TSD|B Chain B, Thymidylate Synthase Complex With 2'-Deoxyuridine 5'-
           Monophosphate (Dump) And Folate Analog 1843u89
 gi|3318670|pdb|1DDU|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717 And
           2', 5'-Dideoxyuridine (Ddurd)
 gi|3318671|pdb|1DDU|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717 And
           2', 5'-Dideoxyuridine (Ddurd)
 gi|3318685|pdb|1TDU|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717 And
           2'- Deoxyuridine (Durd)
 gi|3318686|pdb|1TDU|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717 And
           2'- Deoxyuridine (Durd)
 gi|3318724|pdb|1AN5|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717
 gi|3318725|pdb|1AN5|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717
 gi|3891613|pdb|1AXW|A Chain A, E. Coli Thymidylate Synthase In Complex With Methotrexate
           (Mtx) And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|3891614|pdb|1AXW|B Chain B, E. Coli Thymidylate Synthase In Complex With Methotrexate
           (Mtx) And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|157829994|pdb|1AOB|A Chain A, E. Coli Thymidylate Synthase Complexed With Ddurd
 gi|157830243|pdb|1BDU|A Chain A, E. Coli Thymidylate Synthase Complexed With Durd
 gi|157830328|pdb|1BID|A Chain A, E. Coli Thymidylate Synthase Complexed With Dump
 gi|157833963|pdb|1TJS|A Chain A, E. Coli Thymidylate Synthase
 gi|157834008|pdb|1TRG|A Chain A, E. Coli Thymidylate Synthase In Symmetric Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|157880165|pdb|1SYN|A Chain A, E. Coli Thymidylate Synthase In Complex With Bw1843u89 And
           2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|157880166|pdb|1SYN|B Chain B, E. Coli Thymidylate Synthase In Complex With Bw1843u89 And
           2'-Deoxyuridine 5'-Monophosphate (Dump)
          Length = 265

 Score =  343 bits (880), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 2   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 62  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 122 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 181

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 182 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 241

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 242 DYRFEDFEIEGYDPHPGIKAPVAI 265


>gi|15803346|ref|NP_289379.1| thymidylate synthase [Escherichia coli O157:H7 EDL933]
 gi|15832938|ref|NP_311711.1| thymidylate synthase [Escherichia coli O157:H7 str. Sakai]
 gi|16130731|ref|NP_417304.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|26249257|ref|NP_755297.1| thymidylate synthase [Escherichia coli CFT073]
 gi|74313395|ref|YP_311814.1| thymidylate synthase [Shigella sonnei Ss046]
 gi|89109610|ref|AP_003390.1| thymidylate synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|91212223|ref|YP_542209.1| thymidylate synthase [Escherichia coli UTI89]
 gi|110642995|ref|YP_670725.1| thymidylate synthase [Escherichia coli 536]
 gi|117625080|ref|YP_854068.1| thymidylate synthase [Escherichia coli APEC O1]
 gi|157156066|ref|YP_001464162.1| thymidylate synthase [Escherichia coli E24377A]
 gi|168751042|ref|ZP_02776064.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4113]
 gi|168758211|ref|ZP_02783218.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4401]
 gi|168764657|ref|ZP_02789664.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4501]
 gi|168766799|ref|ZP_02791806.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4486]
 gi|168777651|ref|ZP_02802658.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4196]
 gi|168778820|ref|ZP_02803827.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4076]
 gi|168788090|ref|ZP_02813097.1| thymidylate synthase [Escherichia coli O157:H7 str. EC869]
 gi|168801690|ref|ZP_02826697.1| thymidylate synthase [Escherichia coli O157:H7 str. EC508]
 gi|170082395|ref|YP_001731715.1| thymidylate synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170684262|ref|YP_001744995.1| thymidylate synthase [Escherichia coli SMS-3-5]
 gi|170765924|ref|ZP_02900735.1| thymidylate synthase [Escherichia albertii TW07627]
 gi|188494993|ref|ZP_03002263.1| thymidylate synthase [Escherichia coli 53638]
 gi|191168602|ref|ZP_03030385.1| thymidylate synthase [Escherichia coli B7A]
 gi|191171260|ref|ZP_03032810.1| thymidylate synthase [Escherichia coli F11]
 gi|193065099|ref|ZP_03046173.1| thymidylate synthase [Escherichia coli E22]
 gi|193071410|ref|ZP_03052325.1| thymidylate synthase [Escherichia coli E110019]
 gi|194426405|ref|ZP_03058960.1| thymidylate synthase [Escherichia coli B171]
 gi|194434328|ref|ZP_03066592.1| thymidylate synthase [Shigella dysenteriae 1012]
 gi|195936429|ref|ZP_03081811.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4024]
 gi|208806510|ref|ZP_03248847.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4206]
 gi|208814146|ref|ZP_03255475.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4045]
 gi|208818648|ref|ZP_03258968.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4042]
 gi|209400848|ref|YP_002272290.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4115]
 gi|209920275|ref|YP_002294359.1| thymidylate synthase [Escherichia coli SE11]
 gi|215488145|ref|YP_002330576.1| thymidylate synthase [Escherichia coli O127:H6 str. E2348/69]
 gi|217327216|ref|ZP_03443299.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14588]
 gi|218555376|ref|YP_002388289.1| thymidylate synthase [Escherichia coli IAI1]
 gi|218559839|ref|YP_002392752.1| thymidylate synthase [Escherichia coli S88]
 gi|218690953|ref|YP_002399165.1| thymidylate synthase [Escherichia coli ED1a]
 gi|218696423|ref|YP_002404090.1| thymidylate synthase [Escherichia coli 55989]
 gi|218701541|ref|YP_002409170.1| thymidylate synthase [Escherichia coli IAI39]
 gi|218706321|ref|YP_002413840.1| thymidylate synthase [Escherichia coli UMN026]
 gi|227888391|ref|ZP_04006196.1| thymidylate synthase [Escherichia coli 83972]
 gi|237706513|ref|ZP_04536994.1| thymidylate synthetase [Escherichia sp. 3_2_53FAA]
 gi|238901962|ref|YP_002927758.1| thymidylate synthetase [Escherichia coli BW2952]
 gi|254037878|ref|ZP_04871936.1| thymidylate synthetase [Escherichia sp. 1_1_43]
 gi|254794765|ref|YP_003079602.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14359]
 gi|256024671|ref|ZP_05438536.1| thymidylate synthase [Escherichia sp. 4_1_40B]
 gi|260845489|ref|YP_003223267.1| thymidylate synthetase ThyA [Escherichia coli O103:H2 str. 12009]
 gi|260856939|ref|YP_003230830.1| thymidylate synthetase ThyA [Escherichia coli O26:H11 str. 11368]
 gi|260869506|ref|YP_003235908.1| thymidylate synthetase ThyA [Escherichia coli O111:H- str. 11128]
 gi|261226126|ref|ZP_05940407.1| thymidylate synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256618|ref|ZP_05949151.1| thymidylate synthetase ThyA [Escherichia coli O157:H7 str. FRIK966]
 gi|291284153|ref|YP_003500971.1| Thymidylate synthase [Escherichia coli O55:H7 str. CB9615]
 gi|293406316|ref|ZP_06650242.1| thymidylate synthase [Escherichia coli FVEC1412]
 gi|293412172|ref|ZP_06654895.1| thymidylate synthase [Escherichia coli B354]
 gi|293416071|ref|ZP_06658711.1| thymidylate synthase [Escherichia coli B185]
 gi|293449151|ref|ZP_06663572.1| thymidylate synthase [Escherichia coli B088]
 gi|298382052|ref|ZP_06991649.1| thyA [Escherichia coli FVEC1302]
 gi|300815754|ref|ZP_07095978.1| thymidylate synthase [Escherichia coli MS 107-1]
 gi|300820616|ref|ZP_07100767.1| thymidylate synthase [Escherichia coli MS 119-7]
 gi|300898112|ref|ZP_07116478.1| thymidylate synthase [Escherichia coli MS 198-1]
 gi|300906645|ref|ZP_07124334.1| thymidylate synthase [Escherichia coli MS 84-1]
 gi|300920317|ref|ZP_07136755.1| thymidylate synthase [Escherichia coli MS 115-1]
 gi|300923189|ref|ZP_07139244.1| thymidylate synthase [Escherichia coli MS 182-1]
 gi|300936248|ref|ZP_07151181.1| thymidylate synthase [Escherichia coli MS 21-1]
 gi|300950561|ref|ZP_07164468.1| thymidylate synthase [Escherichia coli MS 116-1]
 gi|300958146|ref|ZP_07170303.1| thymidylate synthase [Escherichia coli MS 175-1]
 gi|300980528|ref|ZP_07175054.1| thymidylate synthase [Escherichia coli MS 45-1]
 gi|300995837|ref|ZP_07181269.1| thymidylate synthase [Escherichia coli MS 200-1]
 gi|301026203|ref|ZP_07189669.1| thymidylate synthase [Escherichia coli MS 196-1]
 gi|301027499|ref|ZP_07190836.1| thymidylate synthase [Escherichia coli MS 69-1]
 gi|301049380|ref|ZP_07196344.1| thymidylate synthase [Escherichia coli MS 185-1]
 gi|301302964|ref|ZP_07209091.1| thymidylate synthase [Escherichia coli MS 124-1]
 gi|301326156|ref|ZP_07219542.1| thymidylate synthase [Escherichia coli MS 78-1]
 gi|301645205|ref|ZP_07245158.1| thymidylate synthase [Escherichia coli MS 146-1]
 gi|306812269|ref|ZP_07446467.1| thymidylate synthase [Escherichia coli NC101]
 gi|307139511|ref|ZP_07498867.1| thymidylate synthase [Escherichia coli H736]
 gi|307310563|ref|ZP_07590211.1| thymidylate synthase [Escherichia coli W]
 gi|309793875|ref|ZP_07688300.1| thymidylate synthase [Escherichia coli MS 145-7]
 gi|331643512|ref|ZP_08344643.1| thymidylate synthase [Escherichia coli H736]
 gi|331648587|ref|ZP_08349675.1| thymidylate synthase [Escherichia coli M605]
 gi|331658975|ref|ZP_08359917.1| thymidylate synthase [Escherichia coli TA206]
 gi|331664389|ref|ZP_08365295.1| thymidylate synthase [Escherichia coli TA143]
 gi|331669559|ref|ZP_08370405.1| thymidylate synthase [Escherichia coli TA271]
 gi|331674312|ref|ZP_08375072.1| thymidylate synthase [Escherichia coli TA280]
 gi|331678805|ref|ZP_08379479.1| thymidylate synthase [Escherichia coli H591]
 gi|331684470|ref|ZP_08385062.1| thymidylate synthase [Escherichia coli H299]
 gi|67474758|sp|P0A884|TYSY_ECOLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|67474759|sp|P0A885|TYSY_ECOL6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|67474760|sp|P0A886|TYSY_ECO57 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123048907|sp|Q0TE05|TYSY_ECOL5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123266005|sp|Q1R7I6|TYSY_ECOUT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123759566|sp|Q3YY33|TYSY_SHISS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231697|sp|A1AF39|TYSY_ECOK1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166991228|sp|A7ZQT3|TYSY_ECO24 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713166|sp|B7MLH3|TYSY_ECO45 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713167|sp|B7NVX2|TYSY_ECO7I RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713168|sp|B7LY83|TYSY_ECO8A RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713169|sp|B7N759|TYSY_ECOLU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790236|sp|B7UHP4|TYSY_ECO27 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790237|sp|B7LF04|TYSY_ECO55 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790238|sp|B7MZC6|TYSY_ECO81 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|259550774|sp|C4ZZX9|TYSY_ECOBW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|494741|pdb|2BBQ|A Chain A, Structural Basis For Recognition Of Polyglutamyl Folates
           By Thymidylate Synthase
 gi|494742|pdb|2BBQ|B Chain B, Structural Basis For Recognition Of Polyglutamyl Folates
           By Thymidylate Synthase
 gi|2781311|pdb|2KCE|A Chain A, Binding Of The Anticancer Drug Zd1694 To E. Coli
           Thymidylate Synthase: Assessing Specificity And Affinity
 gi|2781312|pdb|2KCE|B Chain B, Binding Of The Anticancer Drug Zd1694 To E. Coli
           Thymidylate Synthase: Assessing Specificity And Affinity
 gi|157836897|pdb|3TMS|A Chain A, Plastic Adaptation Toward Mutations In Proteins:
           Structural Comparison Of Thymidylate Synthases
 gi|12517312|gb|AAG57938.1|AE005511_6 thymidylate synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|26109664|gb|AAN81867.1|AE016765_269 Thymidylate synthase [Escherichia coli CFT073]
 gi|147987|gb|AAA24675.1| thymidylate synthase [Escherichia coli]
 gi|1789191|gb|AAC75866.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|13363156|dbj|BAB37107.1| thymidylate synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|73856872|gb|AAZ89579.1| thymidylate synthetase [Shigella sonnei Ss046]
 gi|85675643|dbj|BAE76896.1| thymidylate synthetase [Escherichia coli str. K12 substr. W3110]
 gi|91073797|gb|ABE08678.1| thymidylate synthetase [Escherichia coli UTI89]
 gi|110344587|gb|ABG70824.1| thymidylate synthase [Escherichia coli 536]
 gi|115514204|gb|ABJ02279.1| thymidylate synthetase [Escherichia coli APEC O1]
 gi|157078096|gb|ABV17804.1| thymidylate synthase [Escherichia coli E24377A]
 gi|169890230|gb|ACB03937.1| thymidylate synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170125070|gb|EDS94001.1| thymidylate synthase [Escherichia albertii TW07627]
 gi|170521980|gb|ACB20158.1| thymidylate synthase [Escherichia coli SMS-3-5]
 gi|187767149|gb|EDU30993.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4196]
 gi|188014880|gb|EDU53002.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4113]
 gi|188490192|gb|EDU65295.1| thymidylate synthase [Escherichia coli 53638]
 gi|189003343|gb|EDU72329.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4076]
 gi|189354949|gb|EDU73368.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4401]
 gi|189363818|gb|EDU82237.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4486]
 gi|189365398|gb|EDU83814.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4501]
 gi|189372183|gb|EDU90599.1| thymidylate synthase [Escherichia coli O157:H7 str. EC869]
 gi|189376199|gb|EDU94615.1| thymidylate synthase [Escherichia coli O157:H7 str. EC508]
 gi|190901348|gb|EDV61114.1| thymidylate synthase [Escherichia coli B7A]
 gi|190908560|gb|EDV68149.1| thymidylate synthase [Escherichia coli F11]
 gi|192927230|gb|EDV81850.1| thymidylate synthase [Escherichia coli E22]
 gi|192955272|gb|EDV85760.1| thymidylate synthase [Escherichia coli E110019]
 gi|194415713|gb|EDX31980.1| thymidylate synthase [Escherichia coli B171]
 gi|194417391|gb|EDX33496.1| thymidylate synthase [Shigella dysenteriae 1012]
 gi|208726311|gb|EDZ75912.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4206]
 gi|208735423|gb|EDZ84110.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4045]
 gi|208738771|gb|EDZ86453.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4042]
 gi|209162248|gb|ACI39681.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4115]
 gi|209761050|gb|ACI78837.1| thymidylate synthetase [Escherichia coli]
 gi|209761052|gb|ACI78838.1| thymidylate synthetase [Escherichia coli]
 gi|209761054|gb|ACI78839.1| thymidylate synthetase [Escherichia coli]
 gi|209761056|gb|ACI78840.1| thymidylate synthetase [Escherichia coli]
 gi|209913534|dbj|BAG78608.1| thymidylate synthase [Escherichia coli SE11]
 gi|215266217|emb|CAS10644.1| thymidylate synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|217319583|gb|EEC28008.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14588]
 gi|218353155|emb|CAU99013.1| thymidylate synthetase [Escherichia coli 55989]
 gi|218362144|emb|CAQ99753.1| thymidylate synthetase [Escherichia coli IAI1]
 gi|218366608|emb|CAR04362.1| thymidylate synthetase [Escherichia coli S88]
 gi|218371527|emb|CAR19365.1| thymidylate synthetase [Escherichia coli IAI39]
 gi|218428517|emb|CAR09443.2| thymidylate synthetase [Escherichia coli ED1a]
 gi|218433418|emb|CAR14320.1| thymidylate synthetase [Escherichia coli UMN026]
 gi|222034541|emb|CAP77283.1| Thymidylate synthase [Escherichia coli LF82]
 gi|226839502|gb|EEH71523.1| thymidylate synthetase [Escherichia sp. 1_1_43]
 gi|226899553|gb|EEH85812.1| thymidylate synthetase [Escherichia sp. 3_2_53FAA]
 gi|227834660|gb|EEJ45126.1| thymidylate synthase [Escherichia coli 83972]
 gi|238863661|gb|ACR65659.1| thymidylate synthetase [Escherichia coli BW2952]
 gi|254594165|gb|ACT73526.1| thymidylate synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|257755588|dbj|BAI27090.1| thymidylate synthetase ThyA [Escherichia coli O26:H11 str. 11368]
 gi|257760636|dbj|BAI32133.1| thymidylate synthetase ThyA [Escherichia coli O103:H2 str. 12009]
 gi|257765862|dbj|BAI37357.1| thymidylate synthetase ThyA [Escherichia coli O111:H- str. 11128]
 gi|260448125|gb|ACX38547.1| Thymidylate synthase [Escherichia coli DH1]
 gi|281179852|dbj|BAI56182.1| thymidylate synthetase [Escherichia coli SE15]
 gi|284922763|emb|CBG35851.1| thymidylate synthase [Escherichia coli 042]
 gi|290764026|gb|ADD57987.1| Thymidylate synthase [Escherichia coli O55:H7 str. CB9615]
 gi|291322241|gb|EFE61670.1| thymidylate synthase [Escherichia coli B088]
 gi|291426322|gb|EFE99354.1| thymidylate synthase [Escherichia coli FVEC1412]
 gi|291432260|gb|EFF05242.1| thymidylate synthase [Escherichia coli B185]
 gi|291468943|gb|EFF11434.1| thymidylate synthase [Escherichia coli B354]
 gi|294493395|gb|ADE92151.1| thymidylate synthase [Escherichia coli IHE3034]
 gi|298277192|gb|EFI18708.1| thyA [Escherichia coli FVEC1302]
 gi|299879795|gb|EFI88006.1| thymidylate synthase [Escherichia coli MS 196-1]
 gi|300298822|gb|EFJ55207.1| thymidylate synthase [Escherichia coli MS 185-1]
 gi|300304692|gb|EFJ59212.1| thymidylate synthase [Escherichia coli MS 200-1]
 gi|300315168|gb|EFJ64952.1| thymidylate synthase [Escherichia coli MS 175-1]
 gi|300358170|gb|EFJ74040.1| thymidylate synthase [Escherichia coli MS 198-1]
 gi|300395007|gb|EFJ78545.1| thymidylate synthase [Escherichia coli MS 69-1]
 gi|300401546|gb|EFJ85084.1| thymidylate synthase [Escherichia coli MS 84-1]
 gi|300409228|gb|EFJ92766.1| thymidylate synthase [Escherichia coli MS 45-1]
 gi|300412642|gb|EFJ95952.1| thymidylate synthase [Escherichia coli MS 115-1]
 gi|300420498|gb|EFK03809.1| thymidylate synthase [Escherichia coli MS 182-1]
 gi|300450129|gb|EFK13749.1| thymidylate synthase [Escherichia coli MS 116-1]
 gi|300458573|gb|EFK22066.1| thymidylate synthase [Escherichia coli MS 21-1]
 gi|300526880|gb|EFK47949.1| thymidylate synthase [Escherichia coli MS 119-7]
 gi|300531683|gb|EFK52745.1| thymidylate synthase [Escherichia coli MS 107-1]
 gi|300841628|gb|EFK69388.1| thymidylate synthase [Escherichia coli MS 124-1]
 gi|300847121|gb|EFK74881.1| thymidylate synthase [Escherichia coli MS 78-1]
 gi|301076475|gb|EFK91281.1| thymidylate synthase [Escherichia coli MS 146-1]
 gi|305854307|gb|EFM54745.1| thymidylate synthase [Escherichia coli NC101]
 gi|306909458|gb|EFN39953.1| thymidylate synthase [Escherichia coli W]
 gi|307554821|gb|ADN47596.1| thymidylate synthetase [Escherichia coli ABU 83972]
 gi|307625581|gb|ADN69885.1| thymidylate synthase [Escherichia coli UM146]
 gi|308122282|gb|EFO59544.1| thymidylate synthase [Escherichia coli MS 145-7]
 gi|309703182|emb|CBJ02516.1| thymidylate synthase [Escherichia coli ETEC H10407]
 gi|312947378|gb|ADR28205.1| thymidylate synthase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315062133|gb|ADT76460.1| thymidylate synthetase [Escherichia coli W]
 gi|315137431|dbj|BAJ44590.1| thymidylate synthase [Escherichia coli DH1]
 gi|315256688|gb|EFU36656.1| thymidylate synthase [Escherichia coli MS 85-1]
 gi|315289384|gb|EFU48779.1| thymidylate synthase [Escherichia coli MS 110-3]
 gi|315293800|gb|EFU53152.1| thymidylate synthase [Escherichia coli MS 153-1]
 gi|315295782|gb|EFU55099.1| thymidylate synthase [Escherichia coli MS 16-3]
 gi|315615214|gb|EFU95851.1| thymidylate synthase [Escherichia coli 3431]
 gi|320176416|gb|EFW51470.1| Thymidylate synthase [Shigella dysenteriae CDC 74-1112]
 gi|320182266|gb|EFW57169.1| Thymidylate synthase [Shigella boydii ATCC 9905]
 gi|320189156|gb|EFW63815.1| Thymidylate synthase [Escherichia coli O157:H7 str. EC1212]
 gi|320194962|gb|EFW69591.1| Thymidylate synthase [Escherichia coli WV_060327]
 gi|320202466|gb|EFW77036.1| Thymidylate synthase [Escherichia coli EC4100B]
 gi|320640475|gb|EFX10014.1| thymidylate synthase [Escherichia coli O157:H7 str. G5101]
 gi|320656517|gb|EFX24413.1| thymidylate synthase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662036|gb|EFX29437.1| thymidylate synthase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667111|gb|EFX34074.1| thymidylate synthase [Escherichia coli O157:H7 str. LSU-61]
 gi|323154804|gb|EFZ40998.1| thymidylate synthase [Escherichia coli EPECa14]
 gi|323160030|gb|EFZ45994.1| thymidylate synthase [Escherichia coli E128010]
 gi|323172870|gb|EFZ58501.1| thymidylate synthase [Escherichia coli LT-68]
 gi|323180264|gb|EFZ65816.1| thymidylate synthase [Escherichia coli 1180]
 gi|323183371|gb|EFZ68768.1| thymidylate synthase [Escherichia coli 1357]
 gi|323188757|gb|EFZ74042.1| thymidylate synthase [Escherichia coli RN587/1]
 gi|323377287|gb|ADX49555.1| thymidylate synthase [Escherichia coli KO11]
 gi|323935814|gb|EGB32117.1| thymidylate synthase [Escherichia coli E1520]
 gi|323957433|gb|EGB53155.1| thymidylate synthase [Escherichia coli H263]
 gi|323966808|gb|EGB62239.1| thymidylate synthase [Escherichia coli M863]
 gi|324005631|gb|EGB74850.1| thymidylate synthase [Escherichia coli MS 57-2]
 gi|324011659|gb|EGB80878.1| thymidylate synthase [Escherichia coli MS 60-1]
 gi|324016318|gb|EGB85537.1| thymidylate synthase [Escherichia coli MS 117-3]
 gi|324119867|gb|EGC13746.1| thymidylate synthase [Escherichia coli E1167]
 gi|326339105|gb|EGD62920.1| Thymidylate synthase [Escherichia coli O157:H7 str. 1044]
 gi|326343013|gb|EGD66781.1| Thymidylate synthase [Escherichia coli O157:H7 str. 1125]
 gi|327251574|gb|EGE63260.1| thymidylate synthase [Escherichia coli STEC_7v]
 gi|330908879|gb|EGH37393.1| thymidylate synthase [Escherichia coli AA86]
 gi|331036983|gb|EGI09207.1| thymidylate synthase [Escherichia coli H736]
 gi|331042334|gb|EGI14476.1| thymidylate synthase [Escherichia coli M605]
 gi|331053557|gb|EGI25586.1| thymidylate synthase [Escherichia coli TA206]
 gi|331058320|gb|EGI30301.1| thymidylate synthase [Escherichia coli TA143]
 gi|331063227|gb|EGI35140.1| thymidylate synthase [Escherichia coli TA271]
 gi|331068406|gb|EGI39801.1| thymidylate synthase [Escherichia coli TA280]
 gi|331073635|gb|EGI44956.1| thymidylate synthase [Escherichia coli H591]
 gi|331078085|gb|EGI49291.1| thymidylate synthase [Escherichia coli H299]
 gi|332088662|gb|EGI93775.1| thymidylate synthase [Shigella dysenteriae 155-74]
 gi|332344717|gb|AEE58051.1| thymidylate synthase ThyA [Escherichia coli UMNK88]
 gi|332999582|gb|EGK19167.1| thymidylate synthase [Shigella flexneri VA-6]
          Length = 264

 Score =  343 bits (880), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|296171672|ref|ZP_06852886.1| thymidylate synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894033|gb|EFG73796.1| thymidylate synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 270

 Score =  343 bits (880), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/261 (61%), Positives = 200/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG+Q+R+DLS GFPLLTTKKVH KSVV+ELLWFL
Sbjct: 11  YEDLLRLVLERGTAKSDRTGTGTRSLFGHQLRYDLSAGFPLLTTKKVHLKSVVYELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV++LH HGV+IWDEWA + G+LGPIYGVQWRSWP   G  +DQIS+ ++ LR DP
Sbjct: 71  RGDSNVAWLHEHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHVDQISAALELLRTDP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 131 NSRRIIVSAWNVGEIPQMVLPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ   QL R PR  P++++      +  + 
Sbjct: 191 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRTQLGREPRPYPELVLAQRD-SIFDYT 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y+D  +++Y+PH AI A V+V
Sbjct: 250 YDDVVIKNYDPHPAIKAPVAV 270


>gi|37524624|ref|NP_927968.1| thymidylate synthase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|62901350|sp|Q7N8U4|TYSY_PHOLL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|36784049|emb|CAE12918.1| Thymidylate synthase (TS) (TSase) [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 264

 Score =  343 bits (880), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMTRVLAEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YLH +GV+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+ ++++ L+
Sbjct: 61  WFLNGDTNIKYLHENGVTIWDEWADENGDLGPVYGKQWRAWGTADGRQIDQLKTVLEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR+LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTKLQLSREPRSLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH  I A V++
Sbjct: 241 DYKFDDFEIVDYDPHPGIKAPVAI 264


>gi|168261848|ref|ZP_02683821.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|205349106|gb|EDZ35737.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 264

 Score =  343 bits (880), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLMHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|307129791|ref|YP_003881807.1| thymidylate synthetase [Dickeya dadantii 3937]
 gi|306527320|gb|ADM97250.1| thymidylate synthetase [Dickeya dadantii 3937]
          Length = 264

 Score =  343 bits (880), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YLH + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+ ++++ L+
Sbjct: 61  WFLNGDTNVGYLHDNKVTIWDEWADENGDLGPVYGKQWRAWGTADGRQIDQLQTVLKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYNNHLEQTHLQLSREPRPLPRLVIKRRPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH AI A V+V
Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264


>gi|322831560|ref|YP_004211587.1| thymidylate synthase [Rahnella sp. Y9602]
 gi|321166761|gb|ADW72460.1| thymidylate synthase [Rahnella sp. Y9602]
          Length = 264

 Score =  343 bits (880), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMQKVLDEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ++S+V+ L+
Sbjct: 61  WFLKGETNIAYLRENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLASVVEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+PH AI A V++
Sbjct: 241 DYNFEDFEIEGYDPHPAIKAPVAI 264


>gi|41408967|ref|NP_961803.1| thymidylate synthase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|62901338|sp|Q73VZ2|TYSY_MYCPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|41397326|gb|AAS05186.1| ThyA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 266

 Score =  343 bits (880), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 165/261 (63%), Positives = 199/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH KSVV+ELLWFL
Sbjct: 7   YEDLLRLVLDRGTAKSDRTGTGTRSLFGQQLRYDLSAGFPLITTKKVHLKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +LHRHGV+IWDEWA   G+LGPIYGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNVDWLHRHGVTIWDEWASDTGDLGPIYGVQWRSWPTPSGEHIDQISAALDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGEIPRMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ  LQLSR PR  P++I+  +   +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELILA-HRDSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y+D  + +Y+PH AI A V+V
Sbjct: 246 YDDVVVHNYDPHPAIKAPVAV 266


>gi|108799079|ref|YP_639276.1| thymidylate synthase [Mycobacterium sp. MCS]
 gi|119868194|ref|YP_938146.1| thymidylate synthase [Mycobacterium sp. KMS]
 gi|126434685|ref|YP_001070376.1| thymidylate synthase [Mycobacterium sp. JLS]
 gi|123070298|sp|Q1BA64|TYSY_MYCSS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231714|sp|A3PYA8|TYSY_MYCSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231715|sp|A1UEU8|TYSY_MYCSK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|108769498|gb|ABG08220.1| thymidylate synthase [Mycobacterium sp. MCS]
 gi|119694283|gb|ABL91356.1| thymidylate synthase [Mycobacterium sp. KMS]
 gi|126234485|gb|ABN97885.1| thymidylate synthase [Mycobacterium sp. JLS]
          Length = 266

 Score =  343 bits (880), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 161/261 (61%), Positives = 199/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V + G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KSVV+ELLWFL
Sbjct: 7   YEDLLRLVFERGTPKSDRTGTGTRSLFGHQMRYDLAAGFPLITTKKVHLKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  HGV+IWDEWA + GELGP+YGVQWRSWP   G  +DQIS+ V  LR DP
Sbjct: 67  RGESNVRWLQEHGVTIWDEWASETGELGPVYGVQWRSWPTPSGGHVDQISAAVDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ   QLSR PR  P++++      +  + 
Sbjct: 187 LTHMMAAQAGLGVGEFVWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAQRD-SIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++Y+PH AI A V+V
Sbjct: 246 YEDVVVKNYDPHPAIKAPVAV 266


>gi|24114106|ref|NP_708616.1| thymidylate synthase [Shigella flexneri 2a str. 301]
 gi|30064168|ref|NP_838339.1| thymidylate synthase [Shigella flexneri 2a str. 2457T]
 gi|110806763|ref|YP_690283.1| thymidylate synthase [Shigella flexneri 5 str. 8401]
 gi|27735263|sp|P48464|TYSY_SHIFL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123146739|sp|Q0T137|TYSY_SHIF8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|24053240|gb|AAN44323.1| thymidylate synthetase [Shigella flexneri 2a str. 301]
 gi|30042425|gb|AAP18149.1| thymidylate synthetase [Shigella flexneri 2a str. 2457T]
 gi|110616311|gb|ABF04978.1| thymidylate synthetase [Shigella flexneri 5 str. 8401]
 gi|313647891|gb|EFS12337.1| thymidylate synthase [Shigella flexneri 2a str. 2457T]
 gi|332753548|gb|EGJ83928.1| thymidylate synthase [Shigella flexneri 4343-70]
 gi|332753684|gb|EGJ84063.1| thymidylate synthase [Shigella flexneri K-671]
 gi|332754710|gb|EGJ85076.1| thymidylate synthase [Shigella flexneri 2747-71]
 gi|332999926|gb|EGK19509.1| thymidylate synthase [Shigella flexneri K-218]
 gi|333015044|gb|EGK34387.1| thymidylate synthase [Shigella flexneri K-304]
          Length = 264

 Score =  343 bits (879), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  + A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGVKAPVAI 264


>gi|238754836|ref|ZP_04616187.1| Thymidylate synthase [Yersinia ruckeri ATCC 29473]
 gi|238706996|gb|EEP99362.1| Thymidylate synthase [Yersinia ruckeri ATCC 29473]
          Length = 264

 Score =  343 bits (879), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLDEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S +V+ L+
Sbjct: 61  WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCHLEVGDFVWTGGDTHLYNNHMEQTQLQLSREPRALPKLVIKRKPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+PH AI A V++
Sbjct: 241 DYHFEDFEIEGYDPHPAIKAPVAI 264


>gi|230780|pdb|2TSC|A Chain A, Structure, Multiple Site Binding, And Segmental
           Accomodation In Thymidylate Synthase On Binding DUMP AND
           An Anti-Folate
 gi|230781|pdb|2TSC|B Chain B, Structure, Multiple Site Binding, And Segmental
           Accomodation In Thymidylate Synthase On Binding DUMP AND
           An Anti-Folate
          Length = 264

 Score =  343 bits (879), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRAPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|213964887|ref|ZP_03393086.1| thymidylate synthase [Corynebacterium amycolatum SK46]
 gi|213952423|gb|EEB63806.1| thymidylate synthase [Corynebacterium amycolatum SK46]
          Length = 278

 Score =  343 bits (879), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/261 (61%), Positives = 200/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GTRS FG Q+RFDLS+GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 19  YEDLLREILADGAAKSDRTGTGTRSVFGRQLRFDLSEGFPLITTKKVHLKSIVYELLWFL 78

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV+IWDEWAD DG+LGP+YGVQWRSWP  DG+ IDQI+  +++L+++P
Sbjct: 79  RGDSNVRWLQDRGVTIWDEWADDDGDLGPVYGVQWRSWPTPDGHHIDQIAQALETLKSNP 138

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 139 DSRRNIVSAWNVSEISNMALPPCHLLFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 198

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   GEFI T GD H+Y+NH EQ +LQ+SR PR  P + +      +  + 
Sbjct: 199 LTHMMAQQAGLDVGEFIWTGGDCHIYDNHIEQCELQVSREPRPYPTLKLR-KADSIFDYA 257

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +  Y+PH  I  +V+V
Sbjct: 258 YEDIEVIGYDPHPLIRGQVAV 278


>gi|161506456|ref|YP_001573568.1| thymidylate synthase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189036941|sp|A9MS82|TYSY_SALAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|160867803|gb|ABX24426.1| hypothetical protein SARI_04659 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 264

 Score =  343 bits (879), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG+ IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGHHIDQITTVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV + KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADRKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+FI T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEAGDFIWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|332975369|gb|EGK12263.1| thymidylate synthase [Desmospora sp. 8437]
          Length = 264

 Score =  343 bits (879), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL + ++K G+ + DRTG GT S FG+QMRFDL +GFPL+TTKK+H +S++HELL
Sbjct: 1   MKAYLDLCQRILKEGTRKEDRTGTGTLSLFGHQMRFDLGEGFPLVTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N+ YL  H V IW+EWAD++G+LGP+YG QWRS+   DG  +DQI  +V  ++
Sbjct: 61  WFLQGSTNIRYLQEHQVRIWNEWADENGDLGPVYGKQWRSFSGADGKTVDQIQWVVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   +++MALPPCHCLFQFYV +G LSCQLYQRSGD FLGIPFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPTELEEMALPPCHCLFQFYVKDGTLSCQLYQRSGDTFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + GEFIHTLGD HLY NH +Q   QL+R P  LP + +NP++  + 
Sbjct: 181 YALLTHMIAHVTGLKPGEFIHTLGDAHLYLNHLDQVKEQLTRQPLPLPTLKLNPDVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YED  +  Y+ H  I  +VSV
Sbjct: 241 DFTYEDIRIEGYQSHPHIKGEVSV 264


>gi|82545129|ref|YP_409076.1| thymidylate synthase [Shigella boydii Sb227]
 gi|123741947|sp|Q31XG0|TYSY_SHIBS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|81246540|gb|ABB67248.1| thymidylate synthetase [Shigella boydii Sb227]
 gi|320185586|gb|EFW60351.1| Thymidylate synthase [Shigella flexneri CDC 796-83]
 gi|332091971|gb|EGI97049.1| thymidylate synthase [Shigella boydii 3594-74]
          Length = 264

 Score =  343 bits (879), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y PH  I A V++
Sbjct: 241 DYRFEDFEIEGYAPHPGIKAPVAI 264


>gi|118465321|ref|YP_882829.1| thymidylate synthase [Mycobacterium avium 104]
 gi|254776088|ref|ZP_05217604.1| thymidylate synthase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|166231711|sp|A0QIU1|TYSY_MYCA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|118166608|gb|ABK67505.1| thymidylate synthase [Mycobacterium avium 104]
          Length = 266

 Score =  343 bits (879), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 164/261 (62%), Positives = 199/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH KSVV+ELLWFL
Sbjct: 7   YEDLLRLVLDRGTAKSDRTGTGTRSLFGQQLRYDLSAGFPLITTKKVHLKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +LHRHGV+IWDEWA   G+LGPIYGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNVDWLHRHGVTIWDEWASDTGDLGPIYGVQWRSWPTPSGEHIDQISAALDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGEIPRMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ  LQLSR PR  P++++  +   +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELVLA-HRDSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y+D  + +Y+PH AI A V+V
Sbjct: 246 YDDVVVHNYDPHPAIKAPVAV 266


>gi|82778203|ref|YP_404552.1| thymidylate synthase [Shigella dysenteriae Sd197]
 gi|309785137|ref|ZP_07679768.1| thymidylate synthase [Shigella dysenteriae 1617]
 gi|123728515|sp|Q32C94|TYSY_SHIDS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|81242351|gb|ABB63061.1| thymidylate synthetase [Shigella dysenteriae Sd197]
 gi|308926257|gb|EFP71733.1| thymidylate synthase [Shigella dysenteriae 1617]
          Length = 264

 Score =  342 bits (878), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGNTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|261342247|ref|ZP_05970105.1| thymidylate synthase [Enterobacter cancerogenus ATCC 35316]
 gi|288315583|gb|EFC54521.1| thymidylate synthase [Enterobacter cancerogenus ATCC 35316]
          Length = 264

 Score =  342 bits (878), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH +Q  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|310766593|gb|ADP11543.1| thymidylate synthetase [Erwinia sp. Ejp617]
          Length = 264

 Score =  342 bits (878), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+S +++ L+
Sbjct: 61  WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLSKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +DKMAL PCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL R PR LP+++I      L 
Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH AI A V++
Sbjct: 241 DYCFDDFEIEGYDPHPAIKAPVAI 264


>gi|327332419|gb|EGE74155.1| thymidylate synthase [Propionibacterium acnes HL097PA1]
          Length = 270

 Score =  342 bits (878), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 162/270 (60%), Positives = 202/270 (74%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG  IDQI+ +V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDGGTIDQIAKVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV   D G    LSCQLYQRSGD FLG+
Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270


>gi|146312910|ref|YP_001177984.1| thymidylate synthase [Enterobacter sp. 638]
 gi|166991230|sp|A4WE03|TYSY_ENT38 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145319786|gb|ABP61933.1| thymidylate synthase [Enterobacter sp. 638]
          Length = 264

 Score =  342 bits (878), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  + VSIWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLRENNVSIWDEWADENGNLGPVYGHQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|317493219|ref|ZP_07951642.1| thymidylate synthase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918879|gb|EFV40215.1| thymidylate synthase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 264

 Score =  342 bits (878), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLAEGTQKADRTGTGTVSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQIS +++ L+
Sbjct: 61  WFLNGDTNTAYLRENNVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQISKVMEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A  +    G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQLDLDVGDFVWTGGDTHLYSNHMEQTQLQLSREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|224584790|ref|YP_002638588.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|254790248|sp|C0PXI9|TYSY_SALPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|224469317|gb|ACN47147.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 264

 Score =  342 bits (878), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK  H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKHCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|251790775|ref|YP_003005496.1| thymidylate synthase [Dickeya zeae Ech1591]
 gi|247539396|gb|ACT08017.1| thymidylate synthase [Dickeya zeae Ech1591]
          Length = 264

 Score =  342 bits (877), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL+ + VSIWDEWAD++G LGP+YG QWR+W   DG  IDQ+ +++  L+
Sbjct: 61  WFLNGDTNIGYLNDNKVSIWDEWADENGSLGPVYGKQWRAWGAADGRQIDQLQTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYNNHLEQTRLQLSREPRPLPRLVIKRRPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V+V
Sbjct: 241 DYRFEDFDIEGYDPHPAIKAPVAV 264


>gi|238792783|ref|ZP_04636414.1| Thymidylate synthase [Yersinia intermedia ATCC 29909]
 gi|238727891|gb|EEQ19414.1| Thymidylate synthase [Yersinia intermedia ATCC 29909]
          Length = 264

 Score =  342 bits (877), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S++V+ L+
Sbjct: 61  WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +++MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ +LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCELDVGDFVWTGGDTHLYSNHIEQTNLQLSREPRALPKLIIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A +++
Sbjct: 241 DYRFEDFDIEGYDPHPGIKAPIAI 264


>gi|145224587|ref|YP_001135265.1| thymidylate synthase [Mycobacterium gilvum PYR-GCK]
 gi|189036939|sp|A4TCI9|TYSY_MYCGI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145217073|gb|ABP46477.1| thymidylate synthase [Mycobacterium gilvum PYR-GCK]
          Length = 266

 Score =  342 bits (877), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 160/261 (61%), Positives = 198/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 7   YEDLLRLVLDTGTPKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV+IWDEWA   G+LGP+YGVQWRSWP   G  IDQIS+ +  L+ DP
Sbjct: 67  RGDSNVRWLQERGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGEHIDQISAALDLLKRDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ   QLSR PR  P++++ P    +  + 
Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAPRD-SIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++YEPH AI A V++
Sbjct: 246 YEDVVIKNYEPHPAIKAPVAI 266


>gi|16761778|ref|NP_457395.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29143262|ref|NP_806604.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213051490|ref|ZP_03344368.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213579810|ref|ZP_03361636.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213622588|ref|ZP_03375371.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
 gi|213850170|ref|ZP_03381068.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|20455348|sp|Q8Z412|TYSY_SALTI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|25286009|pir||AB0866 thymidylate synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16504080|emb|CAD02826.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138895|gb|AAO70464.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 264

 Score =  342 bits (877), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|294635084|ref|ZP_06713597.1| thymidylate synthase [Edwardsiella tarda ATCC 23685]
 gi|291091524|gb|EFE24085.1| thymidylate synthase [Edwardsiella tarda ATCC 23685]
          Length = 264

 Score =  342 bits (877), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRKVLDEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV+YLH + V+IWDEWAD+ G+LGP+YG QWR+W   DG  +DQIS ++  LR
Sbjct: 61  WFLKGETNVNYLHDNNVTIWDEWADEQGDLGPVYGKQWRAWGCADGRQVDQISQVMAQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A  +    G+F+ T GD HLY+NH EQ  LQLSR PR LP++++      + 
Sbjct: 181 YALLVHMMAQQLDLAVGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPRLVLARRPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAI 264


>gi|161761105|pdb|2VET|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q
           Complexed With Dump
 gi|163931137|pdb|3B5B|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q
 gi|163931138|pdb|3B5B|B Chain B, Crystal Structure Of The Thymidylate Synthase K48q
          Length = 264

 Score =  342 bits (877), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TT++ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTQRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|291618667|ref|YP_003521409.1| ThyA [Pantoea ananatis LMG 20103]
 gi|291153697|gb|ADD78281.1| ThyA [Pantoea ananatis LMG 20103]
          Length = 279

 Score =  342 bits (877), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R+V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 16  MKQYLDLMRYVLNEGTPKSDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 75

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD+ G LGP+YG QWRSW    G  IDQI+ +++ L+
Sbjct: 76  WFLQGDTNIGYLKENNVSIWDEWADEQGNLGPVYGKQWRSWGTASGQEIDQITKVIEQLK 135

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 136 RDPDSRRIIVSAWNVGELDEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 195

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQA LQL+R PR LP ++I      L 
Sbjct: 196 YALLVHMVAQQCDLDVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPTLVIKRKPASLF 255

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH AI A V+V
Sbjct: 256 DYRFDDFEIEGYDPHPAIKAPVAV 279


>gi|315444918|ref|YP_004077797.1| thymidylate synthase [Mycobacterium sp. Spyr1]
 gi|315263221|gb|ADT99962.1| thymidylate synthase [Mycobacterium sp. Spyr1]
          Length = 266

 Score =  342 bits (877), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 160/261 (61%), Positives = 198/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 7   YEDLLRLVLDTGTPKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV+IWDEWA   G+LGP+YGVQWRSWP   G  IDQIS+ +  L+ DP
Sbjct: 67  RGDSNVRWLQERGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGEHIDQISAALDLLKHDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ   QLSR PR  P++++ P    +  + 
Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAPRD-SIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++YEPH AI A V++
Sbjct: 246 YEDVVIKNYEPHPAIKAPVAI 266


>gi|157162279|ref|YP_001459597.1| thymidylate synthase [Escherichia coli HS]
 gi|170018930|ref|YP_001723884.1| thymidylate synthase [Escherichia coli ATCC 8739]
 gi|256019377|ref|ZP_05433242.1| thymidylate synthase [Shigella sp. D9]
 gi|312972955|ref|ZP_07787128.1| thymidylate synthase [Escherichia coli 1827-70]
 gi|332280497|ref|ZP_08392910.1| thymidylate synthase [Shigella sp. D9]
 gi|166991229|sp|A8A3W0|TYSY_ECOHS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036933|sp|B1IU17|TYSY_ECOLC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157067959|gb|ABV07214.1| thymidylate synthase [Escherichia coli HS]
 gi|169753858|gb|ACA76557.1| Thymidylate synthase [Escherichia coli ATCC 8739]
 gi|310332897|gb|EFQ00111.1| thymidylate synthase [Escherichia coli 1827-70]
 gi|332102849|gb|EGJ06195.1| thymidylate synthase [Shigella sp. D9]
          Length = 264

 Score =  342 bits (877), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGNTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|217976787|ref|YP_002360934.1| Thymidylate synthase [Methylocella silvestris BL2]
 gi|254790244|sp|B8ELI3|TYSY_METSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|217502163|gb|ACK49572.1| Thymidylate synthase [Methylocella silvestris BL2]
          Length = 269

 Score =  342 bits (877), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 159/269 (59%), Positives = 198/269 (73%), Gaps = 5/269 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+  +++ G  + DRTG GT S FGYQMRFDL  GFPL+TTKK+HWKS+VHEL+
Sbjct: 1   MQAYLDLIDKILREGVRKPDRTGTGTLSIFGYQMRFDLGAGFPLVTTKKLHWKSIVHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  +GV IWDEWAD  G+LGP+YG QWRSW   DG  IDQI++++  ++
Sbjct: 61  WFLRGDTNIGYLKDNGVGIWDEWADDSGDLGPVYGRQWRSWQAPDGRTIDQIANVIDEIQ 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVFLGIP 175
            DP+SRR +VSAWN A +  MAL PCHCLFQF V +      +L  QLYQRSGD FLG P
Sbjct: 121 RDPFSRRLLVSAWNPADLPAMALAPCHCLFQFNVRDDSTGTRRLDLQLYQRSGDAFLGAP 180

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT ++ASV G   G+F+HT GD HLY NH +QA LQLSR PR LP++ IN N
Sbjct: 181 FNIASYALLTELVASVCGLTPGDFVHTFGDAHLYLNHIDQAKLQLSRDPRPLPRLRINGN 240

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  L   R+ED +L +Y+PH  I A V+V
Sbjct: 241 VKSLFDIRFEDLSLENYDPHPVIKAPVAV 269


>gi|86141845|ref|ZP_01060369.1| thymidylate synthase [Leeuwenhoekiella blandensis MED217]
 gi|85831408|gb|EAQ49864.1| thymidylate synthase [Leeuwenhoekiella blandensis MED217]
          Length = 283

 Score =  342 bits (876), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 157/286 (54%), Positives = 204/286 (71%), Gaps = 25/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++H++  G+ + DRTG GT S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MQQYHDLVKHILNNGAQKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGV IW+EWAD+DG LGP+YG QWR+W   +   IDQI  +++SL+
Sbjct: 61  WFLKGDTNIEYLKEHGVRIWNEWADEDGNLGPVYGHQWRNW---NSEEIDQIKEVIESLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNG---------K 158
            +P SRR +VSAWN +++              K ALPPCH  FQFYV  G         K
Sbjct: 118 NNPNSRRMLVSAWNPSVMPDTSKSFAENVANGKAALPPCHAFFQFYVAPGDPEAEDKRPK 177

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQLYQRS DVFLG+PFNIASY+L TMM+A V  +  G+FIHT GD H+YNNH EQ +L
Sbjct: 178 LSCQLYQRSADVFLGVPFNIASYALFTMMMAQVCDYAPGDFIHTFGDAHIYNNHIEQLNL 237

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL+R  R LP M +NP + D+ SF ++DF L +Y+PH  I  KV++
Sbjct: 238 QLTREIRKLPTMTLNPEVKDIFSFSFDDFKLENYDPHPHIKGKVAI 283


>gi|152968378|ref|YP_001364162.1| Thymidylate synthase [Kineococcus radiotolerans SRS30216]
 gi|189036937|sp|A6WGF9|TYSY_KINRD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|151362895|gb|ABS05898.1| Thymidylate synthase [Kineococcus radiotolerans SRS30216]
          Length = 268

 Score =  342 bits (876), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 156/262 (59%), Positives = 201/262 (76%), Gaps = 2/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLRHV+  G+ + DRTG GTRS FG+Q+R+DLS GFPL+TTK+VH+KS+  ELLWF
Sbjct: 9   QYEDLLRHVLATGTPKSDRTGTGTRSVFGHQLRYDLSAGFPLVTTKRVHFKSIALELLWF 68

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD NV +L   GV+IWDEWAD++G+LGP+YGVQWRSWP  DG  +DQI+ ++ +LR D
Sbjct: 69  LRGDGNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGRHVDQIAQVLHTLRTD 128

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNVA +D+MAL PCH  FQF+V +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 129 PDSRRMVVSAWNVAELDRMALAPCHAFFQFHVADGKLSCQLYQRSADLFLGVPFNIASYA 188

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT ++A+ +G + G+F+ T GDVH+Y+NH EQ   QL+R+P   P++ + P    L   
Sbjct: 189 LLTHLVAAEVGLEVGDFVWTGGDVHVYDNHVEQVTEQLTRTPYPFPRLAVRP--AGLFEH 246

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YEDF +  Y  H AI A V+V
Sbjct: 247 EYEDFEVLDYRHHPAIKAPVAV 268


>gi|226307948|ref|YP_002767908.1| thymidylate synthase [Rhodococcus erythropolis PR4]
 gi|229495127|ref|ZP_04388873.1| thymidylate synthase [Rhodococcus erythropolis SK121]
 gi|226187065|dbj|BAH35169.1| thymidylate synthase [Rhodococcus erythropolis PR4]
 gi|229318058|gb|EEN83933.1| thymidylate synthase [Rhodococcus erythropolis SK121]
          Length = 266

 Score =  342 bits (876), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 162/261 (62%), Positives = 199/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG+QMRFDL+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 7   YEDLLRLVMETGTAKSDRTGTGTRSIFGHQMRFDLADGFPLVTTKKVHLKSIVNELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV++LH HGVSIWDEWAD++GELGP+YGVQWRSWP   G  IDQI+  V++LR++P
Sbjct: 67  RGDSNVAWLHEHGVSIWDEWADENGELGPVYGVQWRSWPTPSGEHIDQITQTVETLRSNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNVA I +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVADIPQMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   GEF+ T GD H+Y+NH +Q   QL R P  LP + +N     +  + 
Sbjct: 187 LTHMMAQQAGLDVGEFVWTGGDCHIYDNHVDQVTEQLGREPLPLPTLKLNKRD-SIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y+ H AI A V+V
Sbjct: 246 FEDVEIVDYQHHPAIKAPVAV 266


>gi|2098345|pdb|1KCE|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|2098346|pdb|1KCE|B Chain B, E. Coli Thymidylate Synthase Mutant E58q In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|2392565|pdb|1TLS|A Chain A, Thymidylate Synthase Ternary Complex With Fdump And
           Methylenetetrahydrofolate
 gi|2392566|pdb|1TLS|B Chain B, Thymidylate Synthase Ternary Complex With Fdump And
           Methylenetetrahydrofolate
 gi|9257011|pdb|1F4B|A Chain A, Crystal Structure Of Escherichia Coli Thymidylate Synthase
 gi|9257012|pdb|1F4C|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase
           Covalently Modified At C146 With
           N-[tosyl-D-Prolinyl]amino- Ethanethiol
 gi|9257013|pdb|1F4C|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase
           Covalently Modified At C146 With
           N-[tosyl-D-Prolinyl]amino- Ethanethiol
 gi|9257016|pdb|1F4E|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase
           Complexed With Tosyl-D-Proline
 gi|9257017|pdb|1F4F|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase
           Complexed With Sp-722
 gi|9257018|pdb|1F4F|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase
           Complexed With Sp-722
 gi|15988332|pdb|1JTQ|A Chain A, E. Coli Ts Complex With Dump And The Pyrrolo(2,3-D)
           Pyrimidine-Based Antifolate Ly341770
 gi|15988333|pdb|1JTQ|B Chain B, E. Coli Ts Complex With Dump And The Pyrrolo(2,3-D)
           Pyrimidine-Based Antifolate Ly341770
 gi|15988334|pdb|1JTU|A Chain A, E. Coli Thymidylate Synthase In A Complex With Dump And
           Ly338913, A Polyglutamylated Pyrrolo(2,3-D)pyrimidine-
           Based Antifolate
 gi|15988335|pdb|1JTU|B Chain B, E. Coli Thymidylate Synthase In A Complex With Dump And
           Ly338913, A Polyglutamylated Pyrrolo(2,3-D)pyrimidine-
           Based Antifolate
 gi|15988346|pdb|1JUT|A Chain A, E. Coli Thymidylate Synthase Bound To Dump And Ly338529, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988347|pdb|1JUT|B Chain B, E. Coli Thymidylate Synthase Bound To Dump And Ly338529, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|21730588|pdb|1KZI|A Chain A, Crystal Structure Of EctsDUMPTHF COMPLEX
 gi|21730589|pdb|1KZI|B Chain B, Crystal Structure Of EctsDUMPTHF COMPLEX
 gi|82407729|pdb|2A9W|A Chain A, E. Coli Ts Complexed With Dump And Inhibitor Ga9
 gi|82407730|pdb|2A9W|B Chain B, E. Coli Ts Complexed With Dump And Inhibitor Ga9
 gi|82407731|pdb|2A9W|C Chain C, E. Coli Ts Complexed With Dump And Inhibitor Ga9
 gi|82407732|pdb|2A9W|D Chain D, E. Coli Ts Complexed With Dump And Inhibitor Ga9
 gi|93279929|pdb|2G8O|A Chain A, High Resolution Structure Of Escherichia Coli Thymidylate
           Synthase Ternary Complex With Dump And A Cofactor
           Analog, Cb3717
 gi|93279930|pdb|2G8O|B Chain B, High Resolution Structure Of Escherichia Coli Thymidylate
           Synthase Ternary Complex With Dump And A Cofactor
           Analog, Cb3717
 gi|99032326|pdb|2FTQ|A Chain A, E. Coli Thymidylate Synthase At 1.8 A Resolution
 gi|157834019|pdb|1TSN|A Chain A, Thymidylate Synthase Ternary Complex With Fdump And
           Methylenetetrahydrofolate
 gi|215261129|pdb|3B9H|A Chain A, E. Coli Thymidylate Synthase Complexed With 5-Nitro-2'-
           Deoxy Uridine
 gi|215794590|pdb|3BHL|A Chain A, E.Coli Thymidylate Synthase Complexes With 5-No2dump And
           Tetrahydrofolate At 1.4 A Resolution
 gi|215794591|pdb|3BHL|B Chain B, E.Coli Thymidylate Synthase Complexes With 5-No2dump And
           Tetrahydrofolate At 1.4 A Resolution
 gi|215794592|pdb|3BHR|A Chain A, E. Coli Ts Complexed With 5-No2dump And Tetrahydrofolate
           At 1.9 A Resolution (Space Group 152)
          Length = 264

 Score =  342 bits (876), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 152/262 (58%), Positives = 200/262 (76%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|304396692|ref|ZP_07378572.1| thymidylate synthase [Pantoea sp. aB]
 gi|304355488|gb|EFM19855.1| thymidylate synthase [Pantoea sp. aB]
          Length = 264

 Score =  342 bits (876), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMQHVLHEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + VSIWDEWAD++G+LGP+YG QWRSW    G  IDQ+S +++ L+
Sbjct: 61  WFLKGDTNIAYLRENKVSIWDEWADENGDLGPVYGKQWRSWGTASGQEIDQLSQVMEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  + +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RDPDSRRIIVSAWNVGELSEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQA LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH AI A V+V
Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264


>gi|327395047|dbj|BAK12469.1| thymidylate synthase ThyA [Pantoea ananatis AJ13355]
          Length = 264

 Score =  341 bits (875), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R+V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRYVLNEGTPKSDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD+ G LGP+YG QWRSW    G  IDQI+ +++ L+
Sbjct: 61  WFLQGDTNIGYLKENNVSIWDEWADEQGNLGPVYGKQWRSWGTASGQEIDQITKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RDPDSRRIIVSAWNVGELDEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQA LQL+R PR LP ++I      L 
Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPTLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH AI A V+V
Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAV 264


>gi|209761048|gb|ACI78836.1| thymidylate synthetase [Escherichia coli]
 gi|320645721|gb|EFX14706.1| thymidylate synthase [Escherichia coli O157:H- str. 493-89]
 gi|320651021|gb|EFX19461.1| thymidylate synthase [Escherichia coli O157:H- str. H 2687]
 gi|332087353|gb|EGI92481.1| thymidylate synthase [Shigella boydii 5216-82]
          Length = 264

 Score =  341 bits (875), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+   GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWIGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|302532527|ref|ZP_07284869.1| thymidylate synthase [Streptomyces sp. C]
 gi|302441422|gb|EFL13238.1| thymidylate synthase [Streptomyces sp. C]
          Length = 265

 Score =  341 bits (875), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 161/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLRHV+  G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH KS+V+ELLWF
Sbjct: 5   QYEDLLRHVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLKSIVYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  HGV+IWDEWAD DGELGP+YGVQWRSWP  DG  +DQI+ ++ +LR D
Sbjct: 65  LRGDSNVGWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPDGRHVDQITEVLDTLRRD 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV+ + +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRMIVSAWNVSELSRMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A   G + G+FI T GD H+Y+NH EQ   QLSR+P   P++ +      L  +
Sbjct: 185 LLTHMVAQQTGLEPGDFIWTGGDCHIYDNHVEQVTEQLSRTPYEFPRLNLR-QADSLFDY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            Y D  +  Y  H AI A V+V
Sbjct: 244 AYSDVEVLDYRHHPAIKAPVAV 265


>gi|119716538|ref|YP_923503.1| thymidylate synthase [Nocardioides sp. JS614]
 gi|166231720|sp|A1SJ31|TYSY_NOCSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119537199|gb|ABL81816.1| thymidylate synthase [Nocardioides sp. JS614]
          Length = 273

 Score =  341 bits (875), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 158/273 (57%), Positives = 201/273 (73%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+ V+  G  + DRTG GT S FG+QMRFDL  GFPL+TTKKVH +SV  ELL
Sbjct: 1   MRAYLDLLQRVVDEGVPKGDRTGTGTLSVFGHQMRFDLRAGFPLVTTKKVHTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L   G++IWDEWAD+ G+LGP+YG QWRSWP  DG  +DQI+ +V+ +R
Sbjct: 61  WFLRGDTNVKWLQDRGITIWDEWADEQGDLGPVYGYQWRSWPTPDGRHVDQIAQVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---------DNGKLSCQLYQRSGDVF 171
             P SRRH+VSAWNVA I  MAL PCH +FQFYV           G+LSCQLYQRS DVF
Sbjct: 121 DSPDSRRHVVSAWNVADIPDMALAPCHTMFQFYVAPPGPGEESGPGRLSCQLYQRSADVF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLT M+A V G + G+F+HTLGD HLY+NH +QA LQL+R PR LP+++
Sbjct: 181 LGVPFNIASYALLTHMVAQVTGLEVGDFVHTLGDAHLYSNHLDQARLQLTREPRPLPRLV 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           ++ ++ +L +F  E   +  Y+PH  I A ++V
Sbjct: 241 LDSSVTELDAFDLEHIAVEGYDPHPGIKAPIAV 273


>gi|194439864|ref|ZP_03071928.1| thymidylate synthase [Escherichia coli 101-1]
 gi|253772319|ref|YP_003035150.1| thymidylate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162755|ref|YP_003045863.1| thymidylate synthase [Escherichia coli B str. REL606]
 gi|297518254|ref|ZP_06936640.1| thymidylate synthase [Escherichia coli OP50]
 gi|300931292|ref|ZP_07146631.1| thymidylate synthase [Escherichia coli MS 187-1]
 gi|194421201|gb|EDX37224.1| thymidylate synthase [Escherichia coli 101-1]
 gi|242378375|emb|CAQ33153.1| thymidylate synthase [Escherichia coli BL21(DE3)]
 gi|253323363|gb|ACT27965.1| thymidylate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974656|gb|ACT40327.1| thymidylate synthase [Escherichia coli B str. REL606]
 gi|253978821|gb|ACT44491.1| thymidylate synthase [Escherichia coli BL21(DE3)]
 gi|300460876|gb|EFK24369.1| thymidylate synthase [Escherichia coli MS 187-1]
 gi|323960730|gb|EGB56353.1| thymidylate synthase [Escherichia coli H489]
 gi|323971644|gb|EGB66874.1| thymidylate synthase [Escherichia coli TA007]
          Length = 264

 Score =  341 bits (875), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+PH  I A V++
Sbjct: 241 DYSFEDFEIEGYDPHPGIKAPVAI 264


>gi|293394670|ref|ZP_06638962.1| thymidylate synthase [Serratia odorifera DSM 4582]
 gi|291422796|gb|EFE96033.1| thymidylate synthase [Serratia odorifera DSM 4582]
          Length = 264

 Score =  341 bits (875), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLAEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S+++Q L+
Sbjct: 61  WFLNGDTNTAYLRDNKVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVLQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +++MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRPLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH AI A V++
Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAI 264


>gi|24022343|gb|AAN41256.1| mutant thymidilate synthetase [Escherichia coli]
          Length = 264

 Score =  341 bits (875), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFP +TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPQVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|297625969|ref|YP_003687732.1| Thymidylate synthase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921734|emb|CBL56292.1| Thymidylate synthase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 270

 Score =  341 bits (874), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 157/270 (58%), Positives = 202/270 (74%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G D+ DRTGVGTRS FG+QMRF L+ GFPL+TTKK++ + V  ELL
Sbjct: 1   MRQYLDLLTRVMDEGIDKSDRTGVGTRSVFGHQMRFHLADGFPLVTTKKIYTRGVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +LHR+ V IWDEWAD++G+LGP+YG QWRSWP   G  +DQ++ ++  ++
Sbjct: 61  WFLRGDTNIGWLHRNNVHIWDEWADENGDLGPVYGHQWRSWPVPGGGHVDQLAKVIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGI 174
            DP SRR +VSAWNVA +D MALPPCH LFQFYV        GKLSC LYQRS D+FLG+
Sbjct: 121 NDPNSRRLVVSAWNVAEVDDMALPPCHLLFQFYVTPGEDGQPGKLSCGLYQRSADLFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT M+A V G   G+F+HTLGD H+Y+NHF+Q   QLSR+P+ LP++ +NP
Sbjct: 181 PFNIASYALLTHMVAQVCGLGVGDFVHTLGDAHIYHNHFDQVAEQLSRTPKALPRLALNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            + ++  F   D T+  YEP  AI A ++V
Sbjct: 241 QVRNIDEFELSDITVEGYEPDPAIKAPIAV 270


>gi|120403371|ref|YP_953200.1| thymidylate synthase [Mycobacterium vanbaalenii PYR-1]
 gi|166231718|sp|A1T7P4|TYSY_MYCVP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119956189|gb|ABM13194.1| thymidylate synthase [Mycobacterium vanbaalenii PYR-1]
          Length = 266

 Score =  341 bits (874), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 7   YEDLLRLVLDTGTTKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  HGV+IWDEWA   G+LGP+YGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNVRWLQEHGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGAHIDQISAALDLLRRDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV  G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVSGGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ   QLSR PR  P++++      L  + 
Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSREPRPYPELVLAQRD-SLFDYI 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++Y+PH AI A V+V
Sbjct: 246 YEDVVIKNYDPHPAIKAPVAV 266


>gi|308187979|ref|YP_003932110.1| thymidylate synthetase [Pantoea vagans C9-1]
 gi|308058489|gb|ADO10661.1| thymidylate synthetase [Pantoea vagans C9-1]
          Length = 264

 Score =  341 bits (874), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMQHVLHEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSW    G  IDQ+S +++ L+
Sbjct: 61  WFLKGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRSWGTASGQEIDQLSQVMEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  + +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RDPDSRRIIVSAWNVGELSEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQA LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH AI A V++
Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAI 264


>gi|283479574|emb|CAY75490.1| thymidylate synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 279

 Score =  340 bits (873), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 16  MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 75

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+S +++ L+
Sbjct: 76  WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 135

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +++MAL PCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 136 SDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 195

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL R PR LP+++I      L 
Sbjct: 196 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 255

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH AI A V++
Sbjct: 256 DYCFDDFEIEGYDPHPAIKAPVAI 279


>gi|7766859|pdb|1EV5|A Chain A, Crystal Structure Analysis Of Ala167 Mutant Of Escherichia
           Coli
          Length = 264

 Score =  340 bits (873), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 200/262 (76%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRAXDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|68535511|ref|YP_250216.1| thymidylate synthase [Corynebacterium jeikeium K411]
 gi|123761908|sp|Q4JX59|TYSY_CORJK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|68263110|emb|CAI36598.1| thyA [Corynebacterium jeikeium K411]
          Length = 273

 Score =  340 bits (873), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 159/261 (60%), Positives = 197/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ G+ + DRTG GT S FG Q+R+DLS GFPL+TTK VH KSVV ELLWFL
Sbjct: 14  YEDLLREILETGTPKGDRTGTGTTSLFGRQIRYDLSAGFPLITTKSVHVKSVVGELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +G+ IW+EWAD++G+LGP+YGVQWRSWP  +G  IDQI+  +++L+ +P
Sbjct: 74  RGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPNGQHIDQIAGALETLQTNP 133

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ +D MALPPCH LFQ YV NGKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 134 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVANGKLSCQLYQRSADMFLGVPFNIASYSL 193

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEFI T GD H+Y+NH EQ  LQLSR  R  PQ+ +N    D+ S+ 
Sbjct: 194 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHVEQVKLQLSRDARPYPQLKLN-KAADMFSYD 252

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + D     Y+PH  I AKV+V
Sbjct: 253 FSDIEFTGYDPHPVIKAKVAV 273


>gi|9257019|pdb|1F4G|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase
           Complexed With Sp-876
 gi|9257020|pdb|1F4G|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase
           Complexed With Sp-876
          Length = 264

 Score =  340 bits (873), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 152/262 (58%), Positives = 199/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMXAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|270158215|ref|ZP_06186872.1| thymidylate synthase [Legionella longbeachae D-4968]
 gi|269990240|gb|EEZ96494.1| thymidylate synthase [Legionella longbeachae D-4968]
          Length = 269

 Score =  340 bits (873), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 157/264 (59%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL H++K G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H +S+VHELL
Sbjct: 6   MKTYLNLLEHILKNGTRKTDRTGTGTLSIFGYQMRFDLSQGFPLLTTKKLHTRSIVHELL 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N++YL+ +GV+IWDEWAD +G+LGPIYG QWRSWP  DG  IDQ++ +VQ ++
Sbjct: 66  WFLSGNTNIAYLNENGVTIWDEWADSNGDLGPIYGKQWRSWPTSDGRTIDQLNEVVQEIK 125

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR +VSAWNV  +++MAL PCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 126 SNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNILSCQLYQRSADVFLGVPFNIAS 185

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A     Q G+FI T GD HLY NH EQA  QL+R P  L  + I      L 
Sbjct: 186 YSLLTHMVAEQCNLQVGDFIWTGGDCHLYLNHLEQARTQLTREPLPLATLNIKRKPQSLF 245

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF   +Y+ H AI A ++V
Sbjct: 246 EYTFDDFEFLNYQSHPAIKAPIAV 269


>gi|253988063|ref|YP_003039419.1| thymidylate synthase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253779513|emb|CAQ82674.1| thymidylate synthase [Photorhabdus asymbiotica]
          Length = 264

 Score =  340 bits (873), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 151/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKRVLEEGTSKADRTGTGTISIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YLH + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+ ++++ L+
Sbjct: 61  WFLNGDTNIQYLHDNSVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLKTVLEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR+LP+++I      L 
Sbjct: 181 YALLVHMIAQQCDLEVGDFVWTGGDTHLYSNHMEQTQLQLSREPRSLPKLMIKRKPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH  I A V++
Sbjct: 241 DYKFDDFEIVDYDPHPGIKAPVAI 264


>gi|312964897|ref|ZP_07779137.1| thymidylate synthase [Escherichia coli 2362-75]
 gi|312290453|gb|EFR18333.1| thymidylate synthase [Escherichia coli 2362-75]
          Length = 264

 Score =  340 bits (873), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLS  PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSCEPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|259909498|ref|YP_002649854.1| thymidylate synthase [Erwinia pyrifoliae Ep1/96]
 gi|224965120|emb|CAX56652.1| Thymidylate synthase [Erwinia pyrifoliae Ep1/96]
          Length = 264

 Score =  340 bits (873), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+S +++ L+
Sbjct: 61  WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +++MAL PCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL R PR LP+++I      L 
Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH AI A V++
Sbjct: 241 DYCFDDFEIEGYDPHPAIKAPVAI 264


>gi|118617725|ref|YP_906057.1| thymidylate synthase [Mycobacterium ulcerans Agy99]
 gi|166231717|sp|A0PQG7|TYSY_MYCUA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|118569835|gb|ABL04586.1| thymidylate synthase ThyA [Mycobacterium ulcerans Agy99]
          Length = 266

 Score =  340 bits (873), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 162/261 (62%), Positives = 198/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG Q+R+DL  GFPLLTTKKVH+KSVV+ELLWFL
Sbjct: 7   YEDLLRRVLETGTAKSDRTGTGTRSLFGQQIRYDLGCGFPLLTTKKVHFKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L +HGV+IWDEWA + G+LGPIYGVQWRSWP   G  IDQIS+ ++ LR DP
Sbjct: 67  RGDSNVGWLQQHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISAALELLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGQIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ   QL R PR  P++ ++     +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVTEQLRREPRPYPKLSLSQRD-SIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  ++ Y+PH AI A V+V
Sbjct: 246 YEDVVVQDYDPHPAIKAPVAV 266


>gi|187731322|ref|YP_001881432.1| thymidylate synthase [Shigella boydii CDC 3083-94]
 gi|187428314|gb|ACD07588.1| thymidylate synthase [Shigella boydii CDC 3083-94]
          Length = 264

 Score =  340 bits (873), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  D   IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDRRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|294054859|ref|YP_003548517.1| thymidylate synthase [Coraliomargarita akajimensis DSM 45221]
 gi|293614192|gb|ADE54347.1| thymidylate synthase [Coraliomargarita akajimensis DSM 45221]
          Length = 264

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR V++ G+ R DRTG GT S FG Q RF LS  FPLLTTKK+H +S++HELL
Sbjct: 1   MKSYLDLLRTVLETGTFRDDRTGTGTYSIFGAQARFSLSPDFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++G++N+ YL  + V IWDEWAD++G+LG +YG QWR W   +G  +DQ++ ++ +++
Sbjct: 61  WFIQGNTNIQYLKDNKVRIWDEWADENGDLGRVYGAQWRDWAAPNGEHVDQLADVIDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIV AWN   I  MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVCAWNPGEIKHMALPPCHALFQFYVADGELSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   +  EF+HT GD+HLY NH +QA  QLSR PR LPQM +NP++  + 
Sbjct: 181 YALLTMMIAQVCNLKPKEFVHTFGDLHLYANHVDQAKEQLSREPRALPQMKLNPDVHSIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I A ++V
Sbjct: 241 DFKFEDFELVNYDPHPTIKAPIAV 264


>gi|189218127|ref|YP_001938769.1| thymidylate synthase [Methylacidiphilum infernorum V4]
 gi|189184985|gb|ACD82170.1| Thymidylate synthase [Methylacidiphilum infernorum V4]
          Length = 275

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL  V+ FG  ++DRTG+GT S FG Q++FDL+ GFPLLTTKK++WK++V+ELL
Sbjct: 12  MQLYLQLLEKVLNFGIPKKDRTGIGTYSLFGEQLKFDLTLGFPLLTTKKLYWKAIVYELL 71

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH++GV+IWDEWAD++G LG IYG QWRSW   +G  +DQI+ ++  ++
Sbjct: 72  WFLKGDTNVAYLHQNGVTIWDEWADENGNLGRIYGAQWRSWRGANGRTVDQIAWVIDQIK 131

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWN A +++MALPPCH LFQFYV    LSC+LYQRS D+FLG+PFNIAS
Sbjct: 132 KDPDSRRLIVSAWNPAELEEMALPPCHVLFQFYVHYPYLSCKLYQRSADIFLGVPFNIAS 191

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A V G    EFIH+ GD+HLY +H  QA LQL R+P+ LP + INP +  + 
Sbjct: 192 YSLLTHLVAQVTGLIPKEFIHSFGDIHLYASHLSQARLQLERTPKALPSLFINPKVKSID 251

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
              +ED  L+ Y+PH  I A V+V
Sbjct: 252 DISFEDIELKGYDPHPPIKAAVAV 275


>gi|7766862|pdb|1EVG|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia
           Coli With Unmodified Catalytic Cysteine
          Length = 264

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 200/262 (76%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRTCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|2392650|pdb|1ZPR|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|2392651|pdb|1ZPR|B Chain B, E. Coli Thymidylate Synthase Mutant E58q In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
          Length = 264

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 200/262 (76%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++H+LLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHQLLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|4140014|pdb|1DNA|A Chain A, D221(169)n Mutant Does Not Promote Opening Of The Cofactor
           Imidazolidine Ring
 gi|4140015|pdb|1DNA|B Chain B, D221(169)n Mutant Does Not Promote Opening Of The Cofactor
           Imidazolidine Ring
 gi|157830345|pdb|1BJG|A Chain A, D221(169)n Mutant Does Not Promote Opening Of The Cofactor
           Imidazolidine Ring
          Length = 264

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 200/262 (76%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS +VFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCNVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|161761106|pdb|2VF0|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q
           Complexed With 5no2dump And Bw1843u89
 gi|161761107|pdb|2VF0|B Chain B, Crystal Structure Of The Thymidylate Synthase K48q
           Complexed With 5no2dump And Bw1843u89
          Length = 264

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 200/262 (76%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TT++ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTQRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|15827801|ref|NP_302064.1| thymidylate synthase [Mycobacterium leprae TN]
 gi|221230278|ref|YP_002503694.1| thymidylate synthase [Mycobacterium leprae Br4923]
 gi|15214323|sp|Q9CBW0|TYSY_MYCLE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|13093353|emb|CAC30470.1| thymidylate synthase [Mycobacterium leprae]
 gi|219933385|emb|CAR71614.1| thymidylate synthase [Mycobacterium leprae Br4923]
          Length = 266

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G  + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH+KSVV+ELLWFL
Sbjct: 7   YEDLLRLVLDCGVAKMDRTGTGTRSLFGQQLRYDLSVGFPLVTTKKVHFKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV++LH HGV+IWDEWA   G+LGPIYGVQWRSWP   G+ IDQIS+ +  LR +P
Sbjct: 67  RGDSNVAWLHEHGVNIWDEWASSTGDLGPIYGVQWRSWPTSSGDYIDQISTALDLLRTEP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV  G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGEIPQMALPPCHAFFQFYVAQGRLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ  LQLSR PR  P++ +      +  + 
Sbjct: 187 LTHMMAAQSGLLVGEFVWTGGDCHIYDNHVEQVQLQLSREPRAYPELFLAQRD-SIFDYV 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  + +Y+PH AI A V++
Sbjct: 246 YEDVVVTNYDPHPAIKAPVAI 266


>gi|289163528|ref|YP_003453666.1| Thymidylate synthase [Legionella longbeachae NSW150]
 gi|288856701|emb|CBJ10512.1| Thymidylate synthase [Legionella longbeachae NSW150]
          Length = 264

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 157/264 (59%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL H++K G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H +S+VHELL
Sbjct: 1   MKTYLNLLEHILKNGTRKTDRTGTGTLSIFGYQMRFDLSQGFPLLTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N++YL+ +GV+IWDEWAD +G+LGPIYG QWRSWP  DG  IDQ++ +VQ ++
Sbjct: 61  WFLSGNTNIAYLNENGVTIWDEWADSNGDLGPIYGKQWRSWPTSDGRTIDQLNEVVQEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR +VSAWNV  +++MAL PCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNILSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A     Q G+FI T GD HLY NH EQA  QL+R P  L  + I      L 
Sbjct: 181 YSLLTHMVAEQCNLQVGDFIWTGGDCHLYLNHLEQARTQLTREPLPLATLNIKRKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF   +Y+ H AI A ++V
Sbjct: 241 EYTFDDFEFLNYQSHPAIKAPIAV 264


>gi|200387449|ref|ZP_03214061.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|199604547|gb|EDZ03092.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
          Length = 264

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWSTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|289425008|ref|ZP_06426787.1| thymidylate synthase [Propionibacterium acnes SK187]
 gi|289154707|gb|EFD03393.1| thymidylate synthase [Propionibacterium acnes SK187]
          Length = 270

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDKGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+ +V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV   D G    LSCQLYQRSGD FLG+
Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270


>gi|99032324|pdb|2FTN|A Chain A, E. Coli Thymidylate Synthase Y94f Mutant
 gi|99032325|pdb|2FTO|X Chain X, Y94f Mutant Of Thymidylate Synthase Bound To Thymidine-5'-
           Phosphate And 10-Propargyl-5,8-Dideazafolid Acid
          Length = 264

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 200/262 (76%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP++G QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVFGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|9955004|pdb|1FFL|A Chain A, Crystal Structure Of The Apo-Thymidylate Synthase R166q
           Mutant
 gi|39654046|pdb|1FWM|A Chain A, Crystal Structure Of The Thymidylate Synthase R166q Mutant
 gi|39654047|pdb|1FWM|B Chain B, Crystal Structure Of The Thymidylate Synthase R166q Mutant
          Length = 264

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 200/262 (76%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQ+S DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQQSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|313808492|gb|EFS46957.1| thymidylate synthase [Propionibacterium acnes HL087PA2]
          Length = 270

 Score =  340 bits (872), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+ +V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNSIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV   D G    LSCQLYQRSGD FLG+
Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270


>gi|254447388|ref|ZP_05060854.1| thymidylate synthase [gamma proteobacterium HTCC5015]
 gi|198262731|gb|EDY87010.1| thymidylate synthase [gamma proteobacterium HTCC5015]
          Length = 277

 Score =  340 bits (871), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 156/277 (56%), Positives = 205/277 (74%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G  + DRTG GT S FG+QMRFDLS+GFP++TTKK+H +S+VHELL
Sbjct: 1   MKQYLELMQRVLDEGVRKDDRTGTGTLSVFGHQMRFDLSQGFPMVTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  +GVSIWDEWA ++G+LGP+YG QWRSW   +G V+DQI  ++  ++
Sbjct: 61  WFLKGETNIAYLKDNGVSIWDEWATEEGDLGPVYGKQWRSWEGPNGEVVDQIEQLIHDIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN AL+              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 121 TNPDSRRLMVSAWNPALLPDTRKAPHENAADGKQALPPCHTLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GDVFLG+PFNIASY+LLT M+A V   + G+FIHTLGD HLY+NH EQ  LQLSR P  L
Sbjct: 181 GDVFLGVPFNIASYALLTCMVAQVCDLEVGDFIHTLGDAHLYSNHMEQTQLQLSRDPLPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +NP + ++  F ++D  +  Y+ H  I A V+V
Sbjct: 241 PRLKLNPAVKNIFEFTFDDIEVVDYQSHPHIKAPVAV 277


>gi|183981970|ref|YP_001850261.1| thymidylate synthase ThyA [Mycobacterium marinum M]
 gi|183175296|gb|ACC40406.1| thymidylate synthase ThyA [Mycobacterium marinum M]
          Length = 266

 Score =  340 bits (871), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG Q+R+DL  GFPLLTTKKVH+KSVV+ELLWFL
Sbjct: 7   YEDLLRRVLETGTAKSDRTGTGTRSLFGQQIRYDLGCGFPLLTTKKVHFKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L +HGV+IWDEWA + G+LGPIYGVQWRSWP   G  IDQIS+ ++ LR DP
Sbjct: 67  RGDSNVGWLQQHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISAALELLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGQIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y NH EQ   QL R PR  P++ ++     +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYGNHVEQVTEQLRREPRPYPKLSLSQRD-SIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  ++ Y+PH AI A V+V
Sbjct: 246 YEDVVVQDYDPHPAIKAPVAV 266


>gi|289427821|ref|ZP_06429530.1| thymidylate synthase [Propionibacterium acnes J165]
 gi|295131194|ref|YP_003581857.1| thymidylate synthase [Propionibacterium acnes SK137]
 gi|289159003|gb|EFD07198.1| thymidylate synthase [Propionibacterium acnes J165]
 gi|291375426|gb|ADD99280.1| thymidylate synthase [Propionibacterium acnes SK137]
 gi|313773259|gb|EFS39225.1| thymidylate synthase [Propionibacterium acnes HL074PA1]
 gi|313793458|gb|EFS41509.1| thymidylate synthase [Propionibacterium acnes HL110PA1]
 gi|313801143|gb|EFS42406.1| thymidylate synthase [Propionibacterium acnes HL110PA2]
 gi|313812065|gb|EFS49779.1| thymidylate synthase [Propionibacterium acnes HL083PA1]
 gi|313819227|gb|EFS56941.1| thymidylate synthase [Propionibacterium acnes HL046PA2]
 gi|313821101|gb|EFS58815.1| thymidylate synthase [Propionibacterium acnes HL036PA1]
 gi|313823473|gb|EFS61187.1| thymidylate synthase [Propionibacterium acnes HL036PA2]
 gi|313827024|gb|EFS64738.1| thymidylate synthase [Propionibacterium acnes HL063PA1]
 gi|313829862|gb|EFS67576.1| thymidylate synthase [Propionibacterium acnes HL007PA1]
 gi|313834704|gb|EFS72418.1| thymidylate synthase [Propionibacterium acnes HL056PA1]
 gi|313837927|gb|EFS75641.1| thymidylate synthase [Propionibacterium acnes HL086PA1]
 gi|314925914|gb|EFS89745.1| thymidylate synthase [Propionibacterium acnes HL036PA3]
 gi|314960889|gb|EFT04990.1| thymidylate synthase [Propionibacterium acnes HL002PA2]
 gi|314963347|gb|EFT07447.1| thymidylate synthase [Propionibacterium acnes HL082PA1]
 gi|314974024|gb|EFT18120.1| thymidylate synthase [Propionibacterium acnes HL053PA1]
 gi|314975450|gb|EFT19545.1| thymidylate synthase [Propionibacterium acnes HL045PA1]
 gi|314979451|gb|EFT23545.1| thymidylate synthase [Propionibacterium acnes HL072PA2]
 gi|314984210|gb|EFT28302.1| thymidylate synthase [Propionibacterium acnes HL005PA1]
 gi|314988435|gb|EFT32526.1| thymidylate synthase [Propionibacterium acnes HL005PA2]
 gi|314988646|gb|EFT32737.1| thymidylate synthase [Propionibacterium acnes HL005PA3]
 gi|315079373|gb|EFT51371.1| thymidylate synthase [Propionibacterium acnes HL053PA2]
 gi|315079992|gb|EFT51968.1| thymidylate synthase [Propionibacterium acnes HL078PA1]
 gi|315083399|gb|EFT55375.1| thymidylate synthase [Propionibacterium acnes HL027PA2]
 gi|315086806|gb|EFT58782.1| thymidylate synthase [Propionibacterium acnes HL002PA3]
 gi|315089453|gb|EFT61429.1| thymidylate synthase [Propionibacterium acnes HL072PA1]
 gi|315097776|gb|EFT69752.1| thymidylate synthase [Propionibacterium acnes HL038PA1]
 gi|327325399|gb|EGE67204.1| thymidylate synthase [Propionibacterium acnes HL096PA2]
 gi|327328262|gb|EGE70026.1| thymidylate synthase [Propionibacterium acnes HL096PA3]
 gi|327443692|gb|EGE90346.1| thymidylate synthase [Propionibacterium acnes HL043PA1]
 gi|327449229|gb|EGE95883.1| thymidylate synthase [Propionibacterium acnes HL043PA2]
 gi|327450177|gb|EGE96831.1| thymidylate synthase [Propionibacterium acnes HL013PA2]
 gi|327451241|gb|EGE97895.1| thymidylate synthase [Propionibacterium acnes HL092PA1]
 gi|328756767|gb|EGF70383.1| thymidylate synthase [Propionibacterium acnes HL020PA1]
 gi|328761041|gb|EGF74593.1| thymidylate synthase [Propionibacterium acnes HL099PA1]
 gi|332676071|gb|AEE72887.1| thymidylate synthase [Propionibacterium acnes 266]
          Length = 270

 Score =  340 bits (871), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+ +V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV   D G    LSCQLYQRSGD FLG+
Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270


>gi|30352180|gb|AAP31579.1| thymidylate synthase [Shigella flexneri]
          Length = 264

 Score =  340 bits (871), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 151/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH + V+IWD+WAD++G+LGP++G QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIGYLHENNVTIWDDWADENGDLGPVFGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YTLLVHMMAQQCDLEVGDFVWTGGDTHLYTNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|157834047|pdb|1TYS|A Chain A, Water-Mediated Substrate(Slash)product Discrimination: The
           Product Complex Of Thymidylate Synthase At 1.83
           Angstroms
          Length = 265

 Score =  340 bits (871), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 2   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 62  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL P H  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 122 NDPDSRRIIVSAWNVGELDKMALAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 181

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 182 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 241

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 242 DYRFEDFEIEGYDPHPGIKAPVAI 265


>gi|2624566|pdb|1AIQ|A Chain A, Crystal Structure Of Thymidylate Synthase R126e Mutant
 gi|2624567|pdb|1AIQ|B Chain B, Crystal Structure Of Thymidylate Synthase R126e Mutant
 gi|157829911|pdb|1AJM|A Chain A, Crystal Structure Of Thymidylate Synthase R126e Mutant
          Length = 264

 Score =  340 bits (871), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 199/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P S R IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSERIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|260579743|ref|ZP_05847601.1| thymidylate synthase [Corynebacterium jeikeium ATCC 43734]
 gi|258602129|gb|EEW15448.1| thymidylate synthase [Corynebacterium jeikeium ATCC 43734]
          Length = 273

 Score =  340 bits (871), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/261 (60%), Positives = 197/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ G+ + DRTG GT S FG Q+R+DLS GFPL+TTK VH KSVV ELLWFL
Sbjct: 14  YEDLLREILETGTPKGDRTGTGTTSLFGRQIRYDLSAGFPLITTKSVHVKSVVGELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +G+ IW+EWAD++G+LGP+YGVQWRSWP  +G  IDQI+  +++LR +P
Sbjct: 74  RGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPNGQHIDQIAGALETLRTNP 133

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 134 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 193

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEFI T GD H+Y+NH EQ  LQLSR  R  PQ+ +N    D+ S+ 
Sbjct: 194 LTHMFAQQSGLEVGEFIWTGGDCHIYDNHVEQVQLQLSRDARPYPQLKLN-KAADMFSYD 252

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + D     Y+PH  I AKV+V
Sbjct: 253 FSDIEFTGYDPHPVIKAKVAV 273


>gi|281602182|gb|ADA75166.1| Thymidylate synthase [Shigella flexneri 2002017]
          Length = 264

 Score =  339 bits (870), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 151/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S F +QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFVHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  + A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGVKAPVAI 264


>gi|93279927|pdb|2G8M|A Chain A, Escherichia Coli Thymidylate Synthase Y209w In Complex
           With Substrate, Dump, And A Cofactor Analog, Cb3717
 gi|93279928|pdb|2G8M|B Chain B, Escherichia Coli Thymidylate Synthase Y209w In Complex
           With Substrate, Dump, And A Cofactor Analog, Cb3717
 gi|93279931|pdb|2G8X|A Chain A, Escherichia Coli Y209w Apoprotein
 gi|93279932|pdb|2G8X|B Chain B, Escherichia Coli Y209w Apoprotein
          Length = 264

 Score =  339 bits (870), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 200/262 (76%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HL++NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLWSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|238758887|ref|ZP_04620059.1| Thymidylate synthase [Yersinia aldovae ATCC 35236]
 gi|238702844|gb|EEP95389.1| Thymidylate synthase [Yersinia aldovae ATCC 35236]
          Length = 264

 Score =  339 bits (870), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G LGP+YG QWR+W   DG  IDQ+S++V+ L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGSLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A +++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPIAI 264


>gi|319944036|ref|ZP_08018316.1| thymidylate synthase [Lautropia mirabilis ATCC 51599]
 gi|319742797|gb|EFV95204.1| thymidylate synthase [Lautropia mirabilis ATCC 51599]
          Length = 264

 Score =  339 bits (870), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 158/264 (59%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G  + DRTG GT S FG+QMRF L+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MKTYLDLLDHVLTHGVRKEDRTGTGTLSVFGHQMRFPLADGFPLLTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD +G LGP+YG QWRSWP  DG  IDQIS +V+ +R
Sbjct: 61  WFLKGDTNIGYLRDNGVTIWDEWADAEGNLGPVYGAQWRSWPTPDGQHIDQISRVVEDIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  +  MALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RSPDSRRLIVSAWNVGELPHMALPPCHALFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GEFI T GD HLY NH +QA LQLSR+PR LP++ +      + 
Sbjct: 181 YALLTHMVAQQTDLEPGEFIWTGGDCHLYLNHLDQARLQLSRTPRALPRLKLARRPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+P   I A ++V
Sbjct: 241 DYRFEDFVIEDYDPWPGIKAPIAV 264


>gi|20150422|pdb|1JG0|A Chain A, Crystal Structure Of Escherichia Coli Thymidylate Synthase
           Complexed With 2'-Deoxyuridine-5'-Monophosphate And N,O-
           Didansyl-L-Tyrosine
 gi|20150423|pdb|1JG0|B Chain B, Crystal Structure Of Escherichia Coli Thymidylate Synthase
           Complexed With 2'-Deoxyuridine-5'-Monophosphate And N,O-
           Didansyl-L-Tyrosine
          Length = 264

 Score =  339 bits (869), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 199/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + D TG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDATGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGAHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|5107510|pdb|1BQ1|A Chain A, E. Coli Thymidylate Synthase Mutant N177a In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|5107511|pdb|1BQ1|B Chain B, E. Coli Thymidylate Synthase Mutant N177a In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|157830434|pdb|1BQ2|A Chain A, E. Coli Thymidylate Synthase Mutant N177a
          Length = 264

 Score =  339 bits (869), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 199/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PF IASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFAIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|271966278|ref|YP_003340474.1| Thymidylate synthase [Streptosporangium roseum DSM 43021]
 gi|270509453|gb|ACZ87731.1| Thymidylate synthase [Streptosporangium roseum DSM 43021]
          Length = 265

 Score =  339 bits (869), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 161/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLR V+  G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH +S+V+ELLWF
Sbjct: 5   QYEDLLRLVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLRSIVYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSN+ +LH+HGV+IWDEWAD +GELGP+YG QWRSWP  DG  IDQ+S ++ +LR D
Sbjct: 65  LRGDSNIGWLHKHGVTIWDEWADANGELGPVYGAQWRSWPAPDGRHIDQVSEVLDTLRRD 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRMIVSAWNVAELDKMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A   G + G+FI T GD H+Y+NH EQ   QLSR+P   P + +      L  +
Sbjct: 185 LLTHMVAQQAGLKPGDFIWTGGDCHIYDNHVEQVTEQLSRTPFEFPGLRLR-QADSLFDY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            Y D  +  Y  H AI A V+V
Sbjct: 244 AYADVEVLDYRHHPAIKAPVAV 265


>gi|300785995|ref|YP_003766286.1| thymidylate synthase [Amycolatopsis mediterranei U32]
 gi|299795509|gb|ADJ45884.1| thymidylate synthase [Amycolatopsis mediterranei U32]
          Length = 265

 Score =  339 bits (869), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 156/262 (59%), Positives = 203/262 (77%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLRHV+  G+ + DRTG GTRS FG+Q+R+ LS+GFPL+TTKKVH++S+ +ELLWF
Sbjct: 5   QYEDLLRHVLDTGARKGDRTGTGTRSIFGHQLRYRLSEGFPLITTKKVHFRSIAYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD+NVS+L  HGV+IWDEWA +DG+LGP+YGVQWRSWP  DG  +DQI+ ++++LR +
Sbjct: 65  LRGDANVSWLREHGVTIWDEWAAEDGDLGPVYGVQWRSWPTPDGGHVDQIAEVLRTLREN 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA I +MALPPCH  FQF+V +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRIIVSAWNVADIPRMALPPCHAFFQFHVADGKLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT ++A+ +G   G+FI T GD H+Y+NH +Q   QL+R  R  P + + P    L  +
Sbjct: 185 LLTHLIAAQVGLGVGDFIWTGGDCHIYDNHVDQVRTQLAREARPFPTLGLKP-ADSLFEY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YE F++  Y+PH  I A V+V
Sbjct: 244 TYEHFSVEGYDPHPGIKAPVAV 265


>gi|215794567|pdb|3BFI|A Chain A, E. Coli Thymidylate Synthase Y209m Mutant Complexed With
           5- Nitro-Dump
          Length = 264

 Score =  339 bits (869), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 199/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HL +NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLMSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|260886113|ref|ZP_05736540.2| thymidylate synthase [Prevotella tannerae ATCC 51259]
 gi|260850704|gb|EEX70573.1| thymidylate synthase [Prevotella tannerae ATCC 51259]
          Length = 340

 Score =  339 bits (869), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +   G+ + DRTG GT+S FG+QMRF ++ GFPLLTTKK+H KS++HELL
Sbjct: 77  MKQYLDLLNEINTHGTVKHDRTGTGTKSIFGHQMRFQMADGFPLLTTKKLHVKSIIHELL 136

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RG++N+  L   GVSIWDEWAD++G+LGPIYG QWR WPD  G  IDQ++  V+ ++
Sbjct: 137 WFIRGETNIKSLKEAGVSIWDEWADENGDLGPIYGYQWRHWPDGRGGEIDQLAQAVELIK 196

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  I++M LPPCH LFQ+YV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 197 HKPDSRRIIVSAWNVGDIERMKLPPCHILFQYYVADGRLSLQLYQRSADTFLGVPFNIAS 256

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM A V   + G+FI+T GD HLY NH EQA LQL+R+P  LP M +NP    L 
Sbjct: 257 YALLLMMTAQVTDLEPGDFIYTTGDTHLYLNHLEQARLQLTRTPGLLPTMRLNPERRRLE 316

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y P   I A VSV
Sbjct: 317 DFRYEDFELIDYNPQPHIAAPVSV 340


>gi|27574165|pdb|1NCE|A Chain A, Crystal Structure Of A Ternary Complex Of E. Coli
           Thymidylate Synthase D169c With Dump And The Antifolate
           Cb3717
 gi|27574166|pdb|1NCE|B Chain B, Crystal Structure Of A Ternary Complex Of E. Coli
           Thymidylate Synthase D169c With Dump And The Antifolate
           Cb3717
          Length = 264

 Score =  338 bits (868), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 199/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS  VFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCCVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|124003691|ref|ZP_01688539.1| thymidylate synthase [Microscilla marina ATCC 23134]
 gi|123990746|gb|EAY30213.1| thymidylate synthase [Microscilla marina ATCC 23134]
          Length = 264

 Score =  338 bits (867), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 193/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV++ G  + DRTG GT S FGYQMRF+L+ GFPL+TTKK+H +SV+HELL
Sbjct: 1   MQQYTDLVQHVLENGVRKGDRTGTGTLSVFGYQMRFNLADGFPLVTTKKIHLRSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD DG LG +YG QWRSW    G  +DQI++++  ++
Sbjct: 61  WFLKGDTNIRYLQDNGVTIWDEWADDDGNLGSVYGAQWRSWQTATGETVDQITNLINQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  IDKMALPPCH +FQFYV  GKLSCQLYQRS D+ LGIPFNIAS
Sbjct: 121 RNPNSRRLMVSAWNVGEIDKMALPPCHTMFQFYVAEGKLSCQLYQRSADIGLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD H+Y NH +    Q+ R P  LP++ +N  + DL 
Sbjct: 181 YALLLEMVAQVTGLKAGEFIHTFGDAHIYANHEKALREQIQRKPYALPRLELNSEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YED  +  Y+ H  I   V+V
Sbjct: 241 KFTYEDIKVVDYQYHPMIKLPVAV 264


>gi|284033838|ref|YP_003383769.1| thymidylate synthase [Kribbella flavida DSM 17836]
 gi|283813131|gb|ADB34970.1| thymidylate synthase [Kribbella flavida DSM 17836]
          Length = 263

 Score =  338 bits (867), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 157/265 (59%), Positives = 200/265 (75%), Gaps = 3/265 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL HV+  G ++ DRTG GT S FG+Q R+DLS GFP++TTKK+H KSVV EL+
Sbjct: 1   MRQYLELLDHVLTHGVEKGDRTGTGTLSVFGHQARYDLSAGFPVVTTKKLHLKSVVGELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G ++V +L  +G+SIWDEWA  DGELGP+YG QWRSWP  DG  +DQI+ +++++R
Sbjct: 61  WFLSGSTSVKWLQENGISIWDEWAGDDGELGPVYGYQWRSWPTPDGRHVDQIAGVIEAIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRH+VSAWNVA +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRHLVSAWNVAELDDMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP-NIVDL 239
           Y+LLT M+A   G   G+F+HTLGD HLY NH +QA LQL+R PR LP + +   + +D 
Sbjct: 181 YALLTHMVAQQTGLAVGDFVHTLGDAHLYLNHVDQAKLQLTREPRPLPTLRLRERDSID- 239

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
            S+   D  L  Y+PH  I A ++V
Sbjct: 240 -SYEIADVELIGYDPHPGIKAPIAV 263


>gi|220913475|ref|YP_002488784.1| thymidylate synthase [Arthrobacter chlorophenolicus A6]
 gi|219860353|gb|ACL40695.1| Thymidylate synthase [Arthrobacter chlorophenolicus A6]
          Length = 267

 Score =  338 bits (867), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 155/261 (59%), Positives = 198/261 (75%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GT S FG Q+RFDL++GFPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YEDLLRDVLAQGTHKSDRTGTGTTSVFGRQIRFDLAEGFPLITTKRVHFKSVAVELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV ++   GV+IW+EWAD+DG+LGP+YGVQWRSWP  DG  IDQI+ +V++L+A+P
Sbjct: 67  RGETNVKWMQDQGVTIWNEWADEDGDLGPVYGVQWRSWPTPDGGHIDQIAELVENLKANP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHIVSAWNV+ ++ MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRHIVSAWNVSELNDMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA  +G + GEF+ T GDVH+Y NH +Q   QL R P   PQ+ IN     +  + 
Sbjct: 187 LTYMLAQQVGLEPGEFVWTGGDVHIYENHMDQVLKQLEREPYEYPQLKINRKPASIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            EDF +  Y+ H  I A ++V
Sbjct: 247 LEDFEVVGYKHHPTIKAPIAV 267


>gi|296139474|ref|YP_003646717.1| thymidylate synthase [Tsukamurella paurometabola DSM 20162]
 gi|296027608|gb|ADG78378.1| thymidylate synthase [Tsukamurella paurometabola DSM 20162]
          Length = 265

 Score =  338 bits (867), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 159/263 (60%), Positives = 201/263 (76%), Gaps = 5/263 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ R DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KS+ +ELLWFL
Sbjct: 6   YEDLLRDVLANGTHRPDRTGTGTRSVFGRQLRYDLSEGFPLITTKRVHMKSIAYELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  HGV+IWDEWAD +GELGP+YGVQWRSWP  +G  IDQI++ ++ L+ DP
Sbjct: 66  RGDSNVRWLQEHGVTIWDEWADANGELGPVYGVQWRSWPTPNGEHIDQIATAIELLKTDP 125

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ I+ MALPPCH  FQFY  +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 126 SSRRNIVSAWNVSEIENMALPPCHAFFQFYAADGKLSCQLYQRSADLFLGVPFNIASYAL 185

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII--NPNIVDLLS 241
           LT M+A+ +G + G+F+ T GD H+Y+NH EQ   QLSR P   P++ +   P+I D   
Sbjct: 186 LTHMVAAQVGLEPGDFVWTGGDCHIYDNHVEQVTEQLSREPYPYPRLELAERPSIFD--- 242

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + Y D T+  Y+ H AI A V+V
Sbjct: 243 YEYGDITVHDYQHHPAIKAPVAV 265


>gi|238796578|ref|ZP_04640085.1| Thymidylate synthase [Yersinia mollaretii ATCC 43969]
 gi|238719556|gb|EEQ11365.1| Thymidylate synthase [Yersinia mollaretii ATCC 43969]
          Length = 264

 Score =  338 bits (866), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S++V+ L+
Sbjct: 61  WFLNGDTNIGYLKENSVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLIHMMAQQCDLEVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH  I A +++
Sbjct: 241 DYHFDDFEIEGYDPHPGIKAPIAI 264


>gi|138895327|ref|YP_001125780.1| thymidylate synthase [Geobacillus thermodenitrificans NG80-2]
 gi|166231703|sp|A4INY1|TYSY_GEOTN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|134266840|gb|ABO67035.1| Thymidylate synthase,TS, TSase [Geobacillus thermodenitrificans
           NG80-2]
          Length = 264

 Score =  338 bits (866), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 151/264 (57%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL  +++ G ++ DRTGVGT S FG Q+RF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 1   MRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGP+YG QWRSW   DG  +DQI+S+V+ ++
Sbjct: 61  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQIASVVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWNVA +DKM LPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPNSRRLLVNAWNVAELDKMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   GE I T GDVHLY NH EQA LQL+R PR LP++++      + 
Sbjct: 181 YALLTHMIAEQCGLDVGELIFTGGDVHLYKNHIEQAKLQLTREPRPLPKLVLKRKPSSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF +  Y+PH  I A V+V
Sbjct: 241 DYEYDDFEIVGYDPHPTIKAPVAV 264


>gi|217035336|pdb|3BGX|A Chain A, E. Coli Thymidylate Synthase C146s Mutant Complexed With
           Dtmp And Mtf
          Length = 264

 Score =  338 bits (866), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 199/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL P H  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|332527154|ref|ZP_08403229.1| thymidylate synthase [Rubrivivax benzoatilyticus JA2]
 gi|332111580|gb|EGJ11562.1| thymidylate synthase [Rubrivivax benzoatilyticus JA2]
          Length = 273

 Score =  337 bits (865), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 159/262 (60%), Positives = 192/262 (73%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT+S FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF
Sbjct: 12  QYEDFMRHVDTTGVHKSDRTGTGTKSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD N  +L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  +DQI+  V+ L+ D
Sbjct: 72  LRGDGNARWLQERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHVDQIAEAVRLLKTD 131

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNVA + KMAL PCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 132 PDSRRIVVSAWNVAELPKMALMPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIASYA 191

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLTMM+A     Q G+FI T GD HLY+NH EQ   QL+R+P   P M I      +  +
Sbjct: 192 LLTMMMAQQCDLQLGDFIWTGGDCHLYSNHAEQVRTQLARTPFPYPTMEIRRRPASIFDY 251

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YEDF L  Y+ H AI A V+V
Sbjct: 252 EYEDFVLHDYQHHPAIKAPVAV 273


>gi|160872451|ref|ZP_02062583.1| thymidylate synthase [Rickettsiella grylli]
 gi|159121250|gb|EDP46588.1| thymidylate synthase [Rickettsiella grylli]
          Length = 264

 Score =  337 bits (865), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 191/264 (72%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLD L H++K G  + DRTG GT STFGYQMRFDL++GFPLLTTKK+H KSV+HELL
Sbjct: 1   MRVYLDFLHHILKKGQPKIDRTGTGTLSTFGYQMRFDLNRGFPLLTTKKIHLKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL+ H VSIWDEWAD  G LGPIYG QWRSWP  +   IDQ+S+++Q + 
Sbjct: 61  WFLRGDTNIHYLNAHQVSIWDEWADSKGNLGPIYGKQWRSWPTTNDQSIDQLSTLIQQIN 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  + KMALPPCH LFQFYV N +LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 VNPDSRRLIVSAWNVGELKKMALPPCHLLFQFYVANDQLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GEFI T GD H+Y NH EQ   QL+R P   PQ+ I      L 
Sbjct: 181 YALLTQMIAQQCHLKVGEFIWTGGDCHIYCNHLEQVHCQLARQPYLAPQLKILRKPKTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF +  Y  H AI A V+V
Sbjct: 241 DYVYDDFLVTDYHYHPAIKAPVAV 264


>gi|148747783|ref|YP_001285862.1| putative thymidylate synthase [Geobacillus virus E2]
 gi|113715725|gb|ABI36874.1| putative thymidylate synthase [Geobacillus virus E2]
          Length = 264

 Score =  337 bits (865), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +++ G ++ DRTGVGT S FG Q+RF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 1   MKQYLDLLQDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGPIYG QWRSW   DG  IDQI+ +V+ ++
Sbjct: 61  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTIDQIAWVVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P+SRR +VSAWNVA +D+M LPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPHSRRLLVSAWNVAELDEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       GE I T GDVHLY NH EQA LQL+R PR LP++++      + 
Sbjct: 181 YALLTHMVAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVLKRKPPSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF +  Y+PH AI A V+V
Sbjct: 241 DYEYDDFEIVGYDPHPAIKAPVAV 264


>gi|21730590|pdb|1KZJ|A Chain A, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
 gi|21730591|pdb|1KZJ|B Chain B, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
 gi|21730592|pdb|1KZJ|C Chain C, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
 gi|21730593|pdb|1KZJ|D Chain D, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
 gi|21730594|pdb|1KZJ|E Chain E, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
 gi|21730595|pdb|1KZJ|F Chain F, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
          Length = 264

 Score =  337 bits (865), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 199/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+I DEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIGDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|196249232|ref|ZP_03147931.1| Thymidylate synthase [Geobacillus sp. G11MC16]
 gi|196211461|gb|EDY06221.1| Thymidylate synthase [Geobacillus sp. G11MC16]
          Length = 284

 Score =  337 bits (864), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 150/264 (56%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           + QYL LL  +++ G ++ DRTGVGT S FG Q+RF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 21  LRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 80

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGP+YG QWRSW   DG  +DQI+S+V+ ++
Sbjct: 81  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQIASVVEEIK 140

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWNVA +DKM LPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 141 RNPNSRRLLVNAWNVAELDKMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 200

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   GE I T GDVHLY NH EQA LQL+R PR LP++++      + 
Sbjct: 201 YALLTHMIAEQCGLDVGELIFTGGDVHLYKNHIEQAKLQLTREPRPLPKLVLKRKPSSIF 260

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF +  Y+PH  I A V+V
Sbjct: 261 DYEYDDFEIVGYDPHPTIKAPVAV 284


>gi|319442559|ref|ZP_07991715.1| thymidylate synthase [Corynebacterium variabile DSM 44702]
          Length = 270

 Score =  337 bits (864), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 156/261 (59%), Positives = 200/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  +++ G  + DRTG GTRS F  QMRFDL++GFPL+TTKKVH  S+V ELLWFL
Sbjct: 11  YEDLLAEILEHGVHKDDRTGTGTRSLFARQMRFDLAEGFPLITTKKVHLHSIVGELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSN+++LH + VSIWDEWAD+DGELGP+YGVQWRSWP  DG  IDQI++ +++L+ +P
Sbjct: 71  RGDSNIAWLHENKVSIWDEWADEDGELGPVYGVQWRSWPTPDGRHIDQITAALETLKNNP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY++
Sbjct: 131 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAI 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEF+ T GD H+Y+NH +Q  LQLSR  R  P + ++    DL S+R
Sbjct: 191 LTHMFAQQAGLEVGEFVWTGGDCHIYDNHVDQVALQLSREARPYPTLNLH-KAADLFSYR 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y+PH  I A V+V
Sbjct: 250 FDDIEVIGYDPHPGIKAPVAV 270


>gi|238783710|ref|ZP_04627730.1| Thymidylate synthase [Yersinia bercovieri ATCC 43970]
 gi|238715423|gb|EEQ07415.1| Thymidylate synthase [Yersinia bercovieri ATCC 43970]
          Length = 264

 Score =  337 bits (863), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S++V+ L+
Sbjct: 61  WFLNGDTNIGYLKENSVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLIHMMAQQCDLDVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH  I A +++
Sbjct: 241 DYHFDDFEIEGYDPHPGIKAPIAI 264


>gi|7766861|pdb|1EVF|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia
           Coli
          Length = 264

 Score =  337 bits (863), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 150/262 (57%), Positives = 199/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL P H  FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRTXDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|313812335|gb|EFS50049.1| thymidylate synthase [Propionibacterium acnes HL025PA1]
          Length = 269

 Score =  337 bits (863), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 7/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+ +V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPD-GGGTIDQIAKVVEQIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV   D G    LSCQLYQRSGD FLG+
Sbjct: 120 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 240 NVRDIDGFELSDITLTGYDPYPALPAPIAV 269


>gi|305664605|ref|YP_003860892.1| thymidylate synthase [Maribacter sp. HTCC2170]
 gi|88708622|gb|EAR00858.1| thymidylate synthase [Maribacter sp. HTCC2170]
          Length = 274

 Score =  337 bits (863), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 160/277 (57%), Positives = 206/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+ V+K G  + DRTG GT S FG+QMRFDLS+GFP++TTKK+H KS+VHELL
Sbjct: 1   MKQYHDLLKQVLKDGCQKGDRTGTGTLSVFGHQMRFDLSEGFPMVTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  +GV IW+EWAD+ G+LGP+YG QWR+W   +   IDQI  +V SL+
Sbjct: 61  WFLKGETNIAYLQENGVRIWNEWADEKGDLGPVYGHQWRNW---NSEEIDQIKEVVHSLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVGNGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ GEFIH  GD H+YNNH EQ +LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEPGEFIHAFGDAHIYNNHMEQVELQLSREPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M+INP + D+  F+++DF+L  Y PH  I   V+V
Sbjct: 238 PKMVINPEVKDIFDFKFDDFSLVDYNPHPHIKGVVAV 274


>gi|22127047|ref|NP_670470.1| thymidylate synthase [Yersinia pestis KIM 10]
 gi|45442641|ref|NP_994180.1| thymidylate synthase [Yersinia pestis biovar Microtus str. 91001]
 gi|108806482|ref|YP_650398.1| thymidylate synthase [Yersinia pestis Antiqua]
 gi|108813148|ref|YP_648915.1| thymidylate synthase [Yersinia pestis Nepal516]
 gi|145598984|ref|YP_001163060.1| thymidylate synthase [Yersinia pestis Pestoides F]
 gi|150260199|ref|ZP_01916927.1| thymidylate synthase [Yersinia pestis CA88-4125]
 gi|162419494|ref|YP_001607589.1| thymidylate synthase [Yersinia pestis Angola]
 gi|165924834|ref|ZP_02220666.1| thymidylate synthase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939038|ref|ZP_02227590.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010315|ref|ZP_02231213.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212711|ref|ZP_02238746.1| thymidylate synthase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399795|ref|ZP_02305313.1| thymidylate synthase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418797|ref|ZP_02310550.1| thymidylate synthase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425231|ref|ZP_02316984.1| thymidylate synthase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470394|ref|ZP_02335098.1| thymidylate synthase [Yersinia pestis FV-1]
 gi|218927963|ref|YP_002345838.1| thymidylate synthase [Yersinia pestis CO92]
 gi|229837721|ref|ZP_04457881.1| thymidylate synthetase [Yersinia pestis Pestoides A]
 gi|229840685|ref|ZP_04460844.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842759|ref|ZP_04462913.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903591|ref|ZP_04518704.1| thymidylate synthetase [Yersinia pestis Nepal516]
 gi|270487374|ref|ZP_06204448.1| thymidylate synthase [Yersinia pestis KIM D27]
 gi|294503029|ref|YP_003567091.1| thymidylate synthase [Yersinia pestis Z176003]
 gi|20455349|sp|Q8ZHV1|TYSY_YERPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|122979996|sp|Q1CFB5|TYSY_YERPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123245978|sp|Q1CAR9|TYSY_YERPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231745|sp|A4TLC5|TYSY_YERPP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|21960098|gb|AAM86721.1|AE013918_5 thymidylate synthetase [Yersinia pestis KIM 10]
 gi|45437506|gb|AAS63057.1| thymidylate synthase [Yersinia pestis biovar Microtus str. 91001]
 gi|108776796|gb|ABG19315.1| thymidylate synthase [Yersinia pestis Nepal516]
 gi|108778395|gb|ABG12453.1| thymidylate synthase [Yersinia pestis Antiqua]
 gi|115346574|emb|CAL19455.1| thymidylate synthase [Yersinia pestis CO92]
 gi|145210680|gb|ABP40087.1| thymidylate synthase [Yersinia pestis Pestoides F]
 gi|149289607|gb|EDM39684.1| thymidylate synthase [Yersinia pestis CA88-4125]
 gi|162352309|gb|ABX86257.1| thymidylate synthase [Yersinia pestis Angola]
 gi|165912994|gb|EDR31619.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165923034|gb|EDR40185.1| thymidylate synthase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990801|gb|EDR43102.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206003|gb|EDR50483.1| thymidylate synthase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962791|gb|EDR58812.1| thymidylate synthase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050503|gb|EDR61911.1| thymidylate synthase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055631|gb|EDR65415.1| thymidylate synthase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229679361|gb|EEO75464.1| thymidylate synthetase [Yersinia pestis Nepal516]
 gi|229690239|gb|EEO82294.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697051|gb|EEO87098.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704098|gb|EEO91110.1| thymidylate synthetase [Yersinia pestis Pestoides A]
 gi|262361065|gb|ACY57786.1| thymidylate synthase [Yersinia pestis D106004]
 gi|262365008|gb|ACY61565.1| thymidylate synthase [Yersinia pestis D182038]
 gi|270335878|gb|EFA46655.1| thymidylate synthase [Yersinia pestis KIM D27]
 gi|294353488|gb|ADE63829.1| thymidylate synthase [Yersinia pestis Z176003]
 gi|320014147|gb|ADV97718.1| thymidylate synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 264

 Score =  337 bits (863), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G+LGPIYG QWR+W   DG  IDQ+S++V  L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGDLGPIYGKQWRAWGAADGRKIDQLSNVVNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH +QA LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQAHLQLSREPRVLPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH  I A +++
Sbjct: 241 DYHFDDFDIEGYDPHPGIKAPIAI 264


>gi|319763676|ref|YP_004127613.1| thymidylate synthase [Alicycliphilus denitrificans BC]
 gi|330824059|ref|YP_004387362.1| thymidylate synthase [Alicycliphilus denitrificans K601]
 gi|317118237|gb|ADV00726.1| thymidylate synthase [Alicycliphilus denitrificans BC]
 gi|329309431|gb|AEB83846.1| thymidylate synthase [Alicycliphilus denitrificans K601]
          Length = 271

 Score =  336 bits (862), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 192/264 (72%), Gaps = 1/264 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DL+RHV + G  + DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS++ ELLW
Sbjct: 8   HQYEDLMRHVFEHGVAKGDRTGTGTRSVFGHQMRFDLREGFPLVTTKKVHLKSIILELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           FL+G  N  +L   GV+IWDEWAD   G+LGP+YGVQWRSWP   G  IDQIS +V+ LR
Sbjct: 68  FLQGSGNARWLQERGVTIWDEWADPTSGDLGPVYGVQWRSWPTPGGGHIDQISQVVEQLR 127

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +DKMAL PCH  FQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 128 TNPDSRRIIVSAWNVAELDKMALMPCHAFFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 187

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA     + G+FI T GD H+Y+NHFEQ   QL+R PR  P + I      + 
Sbjct: 188 YALLTHMLAQQCDLEVGDFIWTGGDCHIYSNHFEQVRTQLAREPRPYPTLRIKRRPPSIF 247

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF +  Y+PH  I A V+V
Sbjct: 248 DYGYEDFEVEGYDPHPPIKAPVAV 271


>gi|300932648|ref|ZP_07147904.1| thymidylate synthase [Corynebacterium resistens DSM 45100]
          Length = 278

 Score =  336 bits (862), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 154/261 (59%), Positives = 199/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ G+ + DRTG GT S FG Q+R+DL +GFPL+TTKKVH KSVV ELLWFL
Sbjct: 19  YEDLLREILETGAPKGDRTGTGTSSLFGRQIRYDLQQGFPLITTKKVHVKSVVGELLWFL 78

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +GDSNV +L  +G+ IW+EWAD++G+LGP+YGVQWRSWP  DG  +DQI++ +++L+A+P
Sbjct: 79  KGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPDGRHVDQIAAALETLKANP 138

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 139 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 198

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G   GEFI T GD H+Y+NH EQ + QL+R PR  P + +N    D+ S+ 
Sbjct: 199 LTHMFAQQAGLDVGEFIWTGGDCHIYDNHREQVETQLTRDPRPYPTLELN-KAADMFSYD 257

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + D     Y+PH  I A+V+V
Sbjct: 258 FSDIHFAGYDPHPTIKAQVAV 278


>gi|292493864|ref|YP_003529303.1| thymidylate synthase [Nitrosococcus halophilus Nc4]
 gi|291582459|gb|ADE16916.1| thymidylate synthase [Nitrosococcus halophilus Nc4]
          Length = 264

 Score =  336 bits (862), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 158/264 (59%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  G +R DRTG GT S FG+QMRFDL +GFPL+TTKK+H +S+  ELL
Sbjct: 1   MKPYLDLIQKILDTGVERDDRTGTGTWSIFGHQMRFDLQQGFPLVTTKKLHVRSIFIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP  DG  +DQIS +++ +R
Sbjct: 61  WFLRGDTNVQYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGRHLDQISKVLEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +PYSRRH+V A+N + +D+MALPPCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPYSRRHMVVAYNPSNVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT ++A     + GEFI T GDVHLY NH E A LQL+R P   P++ +      L 
Sbjct: 181 YALLTHLMAQQCDLEVGEFIWTGGDVHLYRNHLELARLQLTREPLPPPRLRLKRKPPSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YED  +  Y+ H  I A+VSV
Sbjct: 241 EYQYEDLEVVGYQSHPHIKAEVSV 264


>gi|121998826|ref|YP_001003613.1| thymidylate synthase [Halorhodospira halophila SL1]
 gi|166231707|sp|A1WYP9|TYSY_HALHL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|121590231|gb|ABM62811.1| thymidylate synthase [Halorhodospira halophila SL1]
          Length = 264

 Score =  336 bits (862), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 189/264 (71%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++HV++ G  + DRTG GT S FG+QMRFDL  GFPL+TTK+V W+ V  ELL
Sbjct: 1   MRAYLDLVQHVLEHGHRKEDRTGTGTLSVFGHQMRFDLEAGFPLVTTKRVFWRGVAEELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RG +N   L   GV IW  WAD DGELGP+YG QWRSW   DG  IDQ+  ++  LR
Sbjct: 61  WFIRGSTNARELEDKGVRIWSPWADPDGELGPVYGAQWRSWRAADGREIDQLQQVLTELR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRRH+VSAWNV  +++M LPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QRPDSRRHLVSAWNVGELERMNLPPCHLLFQFYVAEGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A  +G + GEFI T GD HLY NH  QA  QLSR+PR LP + I+P + DL 
Sbjct: 181 YSLLTHLVARHVGLEVGEFIWTGGDCHLYLNHLAQAREQLSRAPRPLPTLHIDPGVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           + RYE   L  Y+PH  + A V+V
Sbjct: 241 AVRYEHLRLAGYDPHPKLTAPVAV 264


>gi|297153967|gb|ADI03679.1| thymidylate synthase [Streptomyces bingchenggensis BCW-1]
          Length = 265

 Score =  336 bits (861), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 160/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLR V+  G+ + DRTG GTRS FG+Q+R+DL++GFPL+TTKKVH +S+V+ELLWF
Sbjct: 5   QYEDLLRLVLTSGTAKADRTGTGTRSVFGHQLRYDLAQGFPLITTKKVHLRSIVYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  HG++IWDEWAD +GELGP+YGVQWRSWP  DG  IDQIS ++ +LR D
Sbjct: 65  LRGDSNVGWLREHGITIWDEWADANGELGPVYGVQWRSWPAPDGRHIDQISQVLDTLRRD 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRMIVSAWNVAELPKMALAPCHALFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A   G + G+F+ T GD H+Y+NH +Q   QLSR+P   P + +      L ++
Sbjct: 185 LLTHMVAQQAGLEPGDFVWTGGDCHIYDNHIKQVTEQLSRTPFEFPGLRLR-QADSLFAY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            Y D  L  Y  H AI A V+V
Sbjct: 244 AYADVELLDYRHHPAIKAPVAV 265


>gi|240171163|ref|ZP_04749822.1| thymidylate synthase [Mycobacterium kansasii ATCC 12478]
          Length = 266

 Score =  336 bits (861), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 162/261 (62%), Positives = 196/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ GS + DRTG GTRS FG Q+R+DLS GFPLLTTKKVH+KSV +ELLWFL
Sbjct: 7   YEDLLRLVLETGSAKSDRTGTGTRSLFGQQIRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSN+ +LH+HGV+IWDEWA + G+LGPIYGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNIGWLHQHGVTIWDEWASETGDLGPIYGVQWRSWPAPSGEHIDQISAALNLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGDIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+      GEFI T GD H+Y+NH EQ   QL R PR  P++++      +  + 
Sbjct: 187 LTHMMAAQSDLDVGEFIWTGGDCHIYDNHVEQVRQQLRREPRPYPKLVLVQRD-SIFDYA 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  + +Y PH AI A V+V
Sbjct: 246 YEDIHVENYHPHPAIKAPVAV 266


>gi|121593609|ref|YP_985505.1| thymidylate synthase [Acidovorax sp. JS42]
 gi|171769450|sp|A1W5A4|TYSY_ACISJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120605689|gb|ABM41429.1| thymidylate synthase [Acidovorax sp. JS42]
          Length = 277

 Score =  336 bits (861), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 161/270 (59%), Positives = 194/270 (71%), Gaps = 7/270 (2%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DL+RHV + G+ + DRTG GT+S FG+QMRFDLS+GFPL+TTKKVH KS++ ELLW
Sbjct: 8   HQYEDLMRHVFEHGTAKGDRTGTGTKSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGDSNV +L   G +IWDEWA  DG LGP+YGVQWRSWP  DG  IDQI  ++ +L+ 
Sbjct: 68  FLRGDSNVRWLQERGCTIWDEWARDDGSLGPVYGVQWRSWPTPDGGHIDQIQQVIDTLKT 127

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGI 174
            P SRR IVSAWNVA +D+MAL PCH  FQFYV       + GKLSCQLYQRS D+FLG+
Sbjct: 128 HPDSRRIIVSAWNVAELDRMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGV 187

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT M+A     Q G+FI T GD H+Y+NHFEQ   QL+R P   P + I  
Sbjct: 188 PFNIASYALLTHMVAQQCDLQVGDFIWTGGDCHIYSNHFEQVRTQLARQPYAYPTLQIKR 247

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               +  + YEDF +  YE H AI A V+V
Sbjct: 248 RPASIFDYAYEDFEVVGYEHHPAIKAPVAV 277


>gi|9257014|pdb|1F4D|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase C146s,
           L143c Covalently Modified At C143 With N-[tosyl-D-
           Prolinyl]amino-Ethanethiol
 gi|9257015|pdb|1F4D|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase C146s,
           L143c Covalently Modified At C143 With N-[tosyl-D-
           Prolinyl]amino-Ethanethiol
          Length = 264

 Score =  336 bits (861), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 150/262 (57%), Positives = 198/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMA  P H  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMACAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|295400392|ref|ZP_06810371.1| thymidylate synthase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312111082|ref|YP_003989398.1| thymidylate synthase [Geobacillus sp. Y4.1MC1]
 gi|294977667|gb|EFG53266.1| thymidylate synthase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311216183|gb|ADP74787.1| thymidylate synthase [Geobacillus sp. Y4.1MC1]
          Length = 264

 Score =  336 bits (861), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 150/264 (56%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +++ G  + DRTG+GT S FG Q+RF+L +GFPLLTTKK+H +S+++ELL
Sbjct: 1   MRQYLDLLQDILENGVPKEDRTGIGTFSVFGRQLRFNLQEGFPLLTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  +GV+IWDEWAD++G+LGP+YG QWRSW   DG  +DQIS +++ ++
Sbjct: 61  WFLRGDTNIRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQISWVIEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWNVA +D+M LPPCH  FQFYV +GKLSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPNSRRLLVNAWNVAELDEMKLPPCHYAFQFYVADGKLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   GE I + GDVHLY NH EQA LQL+R PR LP+++I      + 
Sbjct: 181 YALLTHMIAQQCGLDVGELIFSGGDVHLYKNHIEQAKLQLTREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+PH  I A V+V
Sbjct: 241 EYKFEDFEIVGYDPHPHIKAPVAV 264


>gi|254496004|ref|ZP_05108907.1| thymidylate synthase [Legionella drancourtii LLAP12]
 gi|254354753|gb|EET13385.1| thymidylate synthase [Legionella drancourtii LLAP12]
          Length = 264

 Score =  336 bits (861), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+ YL LL+H+++ G+++ DRTG GT S FGYQMRFDL +GFPL+TTKK+H +S+VHELL
Sbjct: 1   MNTYLHLLKHILQQGTEKTDRTGTGTLSVFGYQMRFDLRQGFPLVTTKKLHMRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GVSIWDEWAD +G LGP+YG QWR+WP  DG  IDQ+S++V  ++
Sbjct: 61  WFLKGDTNIAYLKENGVSIWDEWADNNGNLGPVYGKQWRNWPTADGRHIDQLSAVVAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  +++MAL PCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNTLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+FI T GD HLY NH EQA  QL R P  L  + I      L 
Sbjct: 181 YALLTHMVAQQCNLEVGDFIWTGGDCHLYLNHLEQARTQLQREPLPLATLNIQRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF   +Y+ H AI A ++V
Sbjct: 241 EYVYDDFEFANYQSHPAIKAPIAV 264


>gi|227487755|ref|ZP_03918071.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227542399|ref|ZP_03972448.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227092257|gb|EEI27569.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227181597|gb|EEI62569.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 266

 Score =  335 bits (860), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 162/263 (61%), Positives = 199/263 (75%), Gaps = 5/263 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ G+ + DRTG GT S FG QMRF L++ FPL+TTKKVHWKSVV ELLWFL
Sbjct: 7   YEDLLREILEEGAHKDDRTGTGTTSLFGKQMRFHLAEAFPLITTKKVHWKSVVGELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV++LH +GVSIWDEWAD++GELGPIYGVQWRSWP  +G  IDQI+  ++ L+ DP
Sbjct: 67  RGDSNVAWLHENGVSIWDEWADENGELGPIYGVQWRSWPTPNGQHIDQIAGALELLKKDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 127 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVADGKLSCQLYQRSCDMFLGVPFNIASYSL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN--PNIVDLLS 241
           LT M A   G   G+F+ T GD H+Y+NH EQ   QLSR PR  P++ +   P++ D   
Sbjct: 187 LTHMFAQQAGLDVGDFVWTGGDCHIYDNHREQVREQLSREPRPYPRLDLTRAPSMFD--- 243

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + +E   L  Y+PH  I A V+V
Sbjct: 244 YTFEHINLVGYDPHPTIKAPVAV 266


>gi|222110329|ref|YP_002552593.1| thymidylate synthase [Acidovorax ebreus TPSY]
 gi|221729773|gb|ACM32593.1| thymidylate synthase [Acidovorax ebreus TPSY]
          Length = 277

 Score =  335 bits (860), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 161/270 (59%), Positives = 194/270 (71%), Gaps = 7/270 (2%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DL+RHV + G+ + DRTG GTRS FG+QMRFDL++GFPL+TTKKVH KS++ ELLW
Sbjct: 8   HQYEDLMRHVFEHGTAKGDRTGTGTRSVFGHQMRFDLAEGFPLVTTKKVHLKSIILELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGDSNV +L   G +IWDEWA  DG LGP+YGVQWRSWP  DG  IDQI  ++ +L+ 
Sbjct: 68  FLRGDSNVRWLQERGCTIWDEWARDDGSLGPVYGVQWRSWPTPDGGHIDQIQQVIDTLKT 127

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGI 174
            P SRR IVSAWNVA +D+MAL PCH  FQFYV       + GKLSCQLYQRS D+FLG+
Sbjct: 128 HPDSRRIIVSAWNVAELDQMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGV 187

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT M+A     Q G+FI T GD H+Y+NHFEQ   QL+R P   P + I  
Sbjct: 188 PFNIASYALLTHMVAQQCDLQVGDFIWTGGDCHIYSNHFEQVQTQLARQPYAYPTLQIMR 247

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               +  + YEDF +  YE H AI A V+V
Sbjct: 248 RPASIFDYAYEDFEVVGYEHHPAIKAPVAV 277


>gi|258544418|ref|ZP_05704652.1| thymidylate synthase [Cardiobacterium hominis ATCC 15826]
 gi|258520307|gb|EEV89166.1| thymidylate synthase [Cardiobacterium hominis ATCC 15826]
          Length = 258

 Score =  335 bits (860), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 159/264 (60%), Positives = 198/264 (75%), Gaps = 6/264 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLRH+++ G+ + DRTG GTRS FGYQMRFDL++GFPLLTTK+VH+KSV +ELL
Sbjct: 1   MQTYLDLLRHILEHGAPKADRTGTGTRSVFGYQMRFDLTRGFPLLTTKRVHFKSVAYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +LH HGVSIWDEWAD  G+LGP+YG QWR W        DQI++++  LR
Sbjct: 61  WFLRGDTNIHWLHEHGVSIWDEWADARGDLGPVYGKQWRDW-----GGCDQIANVLDLLR 115

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  + +MAL PCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 116 TDPDSRRMIVSAWNVGELPQMALAPCHALFQFYVAGGRLSCQLYQRSADVFLGVPFNIAS 175

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q GE + T GDVHLYNNH  QA+ QL+R P  LP + +  +   + 
Sbjct: 176 YALLIHMMAQQANLQPGELVWTGGDVHLYNNHLAQAETQLAREPYPLPTLALR-HAPSID 234

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +++Y D TL++Y+ H AI A V+V
Sbjct: 235 AYQYSDITLQNYQSHPAIPAPVAV 258


>gi|196249495|ref|ZP_03148192.1| Thymidylate synthase [Geobacillus sp. G11MC16]
 gi|196210789|gb|EDY05551.1| Thymidylate synthase [Geobacillus sp. G11MC16]
          Length = 264

 Score =  335 bits (860), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR +++ G +R DRTG GT S FG Q+RFDL KGFPLLTTKK+H +S+++ELL
Sbjct: 1   MKQYLDLLRDILENGIEREDRTGTGTISVFGRQLRFDLQKGFPLLTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L+ +GV+IWDEWAD++G+LG IYG QWR+W   D   IDQI+ +V+ ++
Sbjct: 61  WFLRGDTNIRFLNENGVTIWDEWADENGDLGRIYGAQWRAWRTSDSGTIDQITRVVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  +D+MALPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 121 HNPNSRRLLVSAWNVGELDQMALPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GE I + GDVHLY NH EQA LQL+  PR LP++II      + 
Sbjct: 181 YALLTHMVAQQCDLEVGELIFSGGDVHLYKNHVEQAKLQLTHEPRPLPKLIIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF    Y+PH AI A +SV
Sbjct: 241 DYRYEDFEFVGYDPHPAIKAPISV 264


>gi|7766860|pdb|1EV8|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia
           Coli
          Length = 264

 Score =  335 bits (860), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 150/262 (57%), Positives = 198/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL P H  FQFYV +GKLSCQLYQR  DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRCXDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 243 RFEDFEIEGYDPHPGIKAPVAI 264


>gi|314968970|gb|EFT13068.1| thymidylate synthase [Propionibacterium acnes HL037PA1]
          Length = 269

 Score =  335 bits (859), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 7/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG  IDQI+++V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPD-DGGTIDQIANVVEQIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA I +MALPPCH LFQFYV   D G    LSCQLYQRSGD FLG+
Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269


>gi|51597348|ref|YP_071539.1| thymidylate synthase [Yersinia pseudotuberculosis IP 32953]
 gi|153947420|ref|YP_001399968.1| thymidylate synthase [Yersinia pseudotuberculosis IP 31758]
 gi|170023285|ref|YP_001719790.1| thymidylate synthase [Yersinia pseudotuberculosis YPIII]
 gi|186896455|ref|YP_001873567.1| thymidylate synthase [Yersinia pseudotuberculosis PB1/+]
 gi|62901276|sp|Q667F9|TYSY_YERPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166991232|sp|A7FFE0|TYSY_YERP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|51590630|emb|CAH22271.1| thymidylate synthase [Yersinia pseudotuberculosis IP 32953]
 gi|152958915|gb|ABS46376.1| thymidylate synthase [Yersinia pseudotuberculosis IP 31758]
 gi|169749819|gb|ACA67337.1| Thymidylate synthase [Yersinia pseudotuberculosis YPIII]
 gi|186699481|gb|ACC90110.1| thymidylate synthase [Yersinia pseudotuberculosis PB1/+]
          Length = 264

 Score =  335 bits (859), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 151/264 (57%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G+LGPIYG QWR+W   DG  IDQ+S++V  L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGDLGPIYGKQWRAWGAADGRKIDQLSNVVNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH +Q  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH  I A +++
Sbjct: 241 DYHFDDFDIEGYDPHPGIKAPIAI 264


>gi|311744165|ref|ZP_07717970.1| thymidylate synthase [Aeromicrobium marinum DSM 15272]
 gi|311312520|gb|EFQ82432.1| thymidylate synthase [Aeromicrobium marinum DSM 15272]
          Length = 269

 Score =  335 bits (858), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 151/269 (56%), Positives = 201/269 (74%), Gaps = 5/269 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLD++R ++  G ++ DRTG GT S FG+Q R+DL  GFPL+TTK++H  SVV ELL
Sbjct: 1   MQAYLDIIRRILDEGVEKSDRTGTGTLSVFGHQTRYDLRAGFPLVTTKRIHLPSVVGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ GD+N ++L  HGV+IWDEWAD++G+LGP+YG QWRSWP   G  +DQ++++VQ L 
Sbjct: 61  WFVSGDTNTAFLREHGVTIWDEWADENGDLGPVYGHQWRSWPTPSGQHVDQLAAVVQQLG 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-----NGKLSCQLYQRSGDVFLGIP 175
            DP SRRH+VSAWNVA +D MAL PCH LFQFYV+      G+LSCQLYQRS DVFLG+P
Sbjct: 121 VDPDSRRHLVSAWNVADLDAMALAPCHALFQFYVEPRTDGPGRLSCQLYQRSADVFLGVP 180

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A V G + G+F+HTLGD HLY NH +QA  QL+R+PR LP + ++P 
Sbjct: 181 FNIASYALLTHMVAQVAGLEVGDFVHTLGDAHLYLNHLDQAREQLTRAPRPLPDLWLDPQ 240

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  +  F ++   +  Y+PH +I A ++V
Sbjct: 241 VDSIDGFGFDSIKVTGYDPHPSIKAPIAV 269


>gi|160900402|ref|YP_001565984.1| thymidylate synthase [Delftia acidovorans SPH-1]
 gi|160365986|gb|ABX37599.1| Thymidylate synthase [Delftia acidovorans SPH-1]
          Length = 274

 Score =  335 bits (858), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 156/262 (59%), Positives = 194/262 (74%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV + G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF
Sbjct: 13  QYEDFMRHVYEHGVSKTDRTGTGTRSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 72

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L   G +IW+EWA +DG+LGP+YGVQWR+WP  DG  IDQI+ +V+ L+++
Sbjct: 73  LRGDSNVRWLQERGCTIWNEWAREDGDLGPVYGVQWRNWPTPDGGHIDQIAEVVKQLKSN 132

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA + +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 133 PDSRRIIVSAWNVADLPQMALMPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIASYA 192

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT MLA     Q G+F+ T GD H+YNNHF Q + QL+R P   P + I      +  +
Sbjct: 193 LLTHMLAQQCDLQVGDFVWTGGDCHIYNNHFAQVETQLARQPFAYPTLQIKRRPDSIFGY 252

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YEDF +  Y+ H  I A V+V
Sbjct: 253 EYEDFEVVGYQHHEPIKAPVAV 274


>gi|294478969|gb|ADE87534.1| thymidylate synthase [Deep-sea thermophilic phage D6E]
          Length = 264

 Score =  335 bits (858), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +++ G ++ DRTG GT S FG Q+RF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 1   MKQYLDLLQDILENGVEKEDRTGTGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGPIYG QWRSW   DG  +DQI+++ + ++
Sbjct: 61  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTVDQIAAVFKEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + +M LPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPNSRRLLVSAWNVAKLGEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       GE I T GDVHLY NH EQA LQL+R PR LP+++I      + 
Sbjct: 181 YALLTHMVAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPPSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF    Y+PH AI A VSV
Sbjct: 241 DYEYEDFEFVGYDPHPAIKAPVSV 264


>gi|289209065|ref|YP_003461131.1| thymidylate synthase [Thioalkalivibrio sp. K90mix]
 gi|288944696|gb|ADC72395.1| thymidylate synthase [Thioalkalivibrio sp. K90mix]
          Length = 272

 Score =  334 bits (857), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 155/277 (55%), Positives = 197/277 (71%), Gaps = 18/277 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RH+   G DR DRTG GTRS FGYQMRFDL+ GFPL+TTK+ H +SV+HELL
Sbjct: 1   MQQYLDLVRHIRAHGIDRPDRTGTGTRSVFGYQMRFDLAAGFPLVTTKRTHLRSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RG++N+ YL  H V IWDEWA + G+LGPIYG QWR+W  +     DQ++ +V +L+
Sbjct: 61  WFIRGETNIGYLKEHKVRIWDEWATEGGDLGPIYGAQWRNWAGH-----DQLAELVSNLK 115

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             PYSRRHI+SAWNVA +              +MAL PCH LFQFYV +G+LSCQLYQRS
Sbjct: 116 NRPYSRRHIISAWNVADLPDESISPQENANAGRMALAPCHTLFQFYVADGRLSCQLYQRS 175

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+L T MLA V   + G+F+HT GD HLY+NH +Q D  L R P  L
Sbjct: 176 ADVFLGVPFNIASYALFTHMLAQVADLEPGDFVHTFGDAHLYHNHEQQVDELLGREPLPL 235

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + +NP + DL +F ++D  +R Y+ H  I A V++
Sbjct: 236 PTLHLNPEVTDLFAFTFDDIEVRDYQSHPPIKAPVAI 272


>gi|229821345|ref|YP_002882871.1| thymidylate synthase [Beutenbergia cavernae DSM 12333]
 gi|229567258|gb|ACQ81109.1| thymidylate synthase [Beutenbergia cavernae DSM 12333]
          Length = 275

 Score =  334 bits (857), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 195/264 (73%), Gaps = 5/264 (1%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL  V+  G+ + DRTG GTRS FG Q+R+DL   FPL+TTK+VH KS+VHELLWF
Sbjct: 15  QYEDLLAEVLADGAHKSDRTGTGTRSVFGRQLRYDLRHSFPLVTTKRVHVKSLVHELLWF 74

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG+SNV YL  +GV IW+EWAD DGELGP+YGVQWRSWP  DG  IDQI+ +V++LR D
Sbjct: 75  LRGESNVRYLQENGVRIWNEWADDDGELGPVYGVQWRSWPTPDGGHIDQIARVVENLRTD 134

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRRHIVSAWNVA +D MAL PCH LFQFYV NG+LSCQLYQRS D+FLG+PFN+ASYS
Sbjct: 135 PDSRRHIVSAWNVAELDDMALAPCHALFQFYVANGELSCQLYQRSADLFLGVPFNVASYS 194

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN--PNIVDLL 240
           LLT M+A   G   G+F+ T GD H+Y+NH EQ   QL+R P   P + +   P+I D  
Sbjct: 195 LLTHMVAQQTGLAVGDFVWTGGDCHIYDNHTEQVREQLARDPYPFPTLALRQAPSIFD-- 252

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y D  +  Y+ HA I A ++V
Sbjct: 253 -YAYADVEVVGYQHHAPIAAPIAV 275


>gi|5542439|pdb|1QQQ|A Chain A, Crystal Structure Analysis Of Ser254 Mutant Of Escherichia
           Coli Thymidylate Synthase
          Length = 264

 Score =  334 bits (857), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 150/262 (57%), Positives = 198/262 (75%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWF
Sbjct: 3   QYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLWF 62

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 63  LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 122

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL P H  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 123 PDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRSXDVFLGLPFNIASYA 182

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 183 LLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 242

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+ H  I A V++
Sbjct: 243 RFEDFEIEGYDSHPGIKAPVAI 264


>gi|120610137|ref|YP_969815.1| thymidylate synthase [Acidovorax citrulli AAC00-1]
 gi|171769177|sp|A1TM53|TYSY_ACIAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120588601|gb|ABM32041.1| thymidylate synthase [Acidovorax citrulli AAC00-1]
          Length = 279

 Score =  334 bits (856), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 163/269 (60%), Positives = 196/269 (72%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GTRS FGYQMRFDL++GFPL+TTKKVH KS++ ELLWF
Sbjct: 11  QYEDFMRHVYTHGVAKGDRTGTGTRSVFGYQMRFDLNEGFPLVTTKKVHLKSIITELLWF 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G S+  +L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS +V++LR  
Sbjct: 71  LTGSSSNHWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISQVVETLRTH 130

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA +DKMAL PCH  FQFYV       + GKLSCQLYQRS D+FLG+P
Sbjct: 131 PDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPPQAAGERGKLSCQLYQRSADIFLGVP 190

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A     + G+FI T GD H+Y+NHFEQ +LQLSR+P   P + I   
Sbjct: 191 FNIASYALLTHMMAQQCNLEVGDFIWTGGDCHIYSNHFEQVELQLSRAPHPYPTLHILRR 250

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              L  +R+EDF +R Y  H AI A V+V
Sbjct: 251 PDSLFDYRFEDFEVRDYAHHPAIKAPVAV 279


>gi|239827018|ref|YP_002949642.1| thymidylate synthase [Geobacillus sp. WCH70]
 gi|259550783|sp|C5DAR2|TYSY_GEOSW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|239807311|gb|ACS24376.1| thymidylate synthase [Geobacillus sp. WCH70]
          Length = 264

 Score =  334 bits (856), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL  +++ G ++ DRTGVGT S FG Q+RF+L +GFPLLTTKK+H +S+++ELL
Sbjct: 1   MRQYLQLLEDILENGVEKDDRTGVGTLSVFGRQLRFNLQEGFPLLTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGPIYG QWRSW   DG  +DQIS +++ ++
Sbjct: 61  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTVDQISWVIEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA +DKM LPPCH  FQFYV +GKLSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPNSRRLLVSAWNVAELDKMKLPPCHYAFQFYVADGKLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       GE I + GDVHLY NH EQA LQL+R PR LP+++I      + 
Sbjct: 181 YALLTHMIAQQCDLDVGELIFSGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+PH  I A V+V
Sbjct: 241 EYEFEDFEIVDYDPHPHIKAPVAV 264


>gi|50843135|ref|YP_056362.1| thymidylate synthase [Propionibacterium acnes KPA171202]
 gi|282855010|ref|ZP_06264342.1| thymidylate synthase [Propionibacterium acnes J139]
 gi|62901287|sp|Q6A761|TYSY_PROAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|50840737|gb|AAT83404.1| thymidylate synthase [Propionibacterium acnes KPA171202]
 gi|282581598|gb|EFB86983.1| thymidylate synthase [Propionibacterium acnes J139]
 gi|313763382|gb|EFS34746.1| thymidylate synthase [Propionibacterium acnes HL013PA1]
 gi|313814694|gb|EFS52408.1| thymidylate synthase [Propionibacterium acnes HL059PA1]
 gi|313828240|gb|EFS65954.1| thymidylate synthase [Propionibacterium acnes HL063PA2]
 gi|314914540|gb|EFS78371.1| thymidylate synthase [Propionibacterium acnes HL005PA4]
 gi|314917608|gb|EFS81439.1| thymidylate synthase [Propionibacterium acnes HL050PA1]
 gi|314919636|gb|EFS83467.1| thymidylate synthase [Propionibacterium acnes HL050PA3]
 gi|314930291|gb|EFS94122.1| thymidylate synthase [Propionibacterium acnes HL067PA1]
 gi|314956850|gb|EFT01004.1| thymidylate synthase [Propionibacterium acnes HL027PA1]
 gi|314957647|gb|EFT01750.1| thymidylate synthase [Propionibacterium acnes HL002PA1]
 gi|314967396|gb|EFT11495.1| thymidylate synthase [Propionibacterium acnes HL082PA2]
 gi|314982115|gb|EFT26208.1| thymidylate synthase [Propionibacterium acnes HL110PA3]
 gi|315090354|gb|EFT62330.1| thymidylate synthase [Propionibacterium acnes HL110PA4]
 gi|315093637|gb|EFT65613.1| thymidylate synthase [Propionibacterium acnes HL060PA1]
 gi|315098007|gb|EFT69983.1| thymidylate synthase [Propionibacterium acnes HL059PA2]
 gi|315102647|gb|EFT74623.1| thymidylate synthase [Propionibacterium acnes HL046PA1]
 gi|315104462|gb|EFT76438.1| thymidylate synthase [Propionibacterium acnes HL050PA2]
 gi|315106205|gb|EFT78181.1| thymidylate synthase [Propionibacterium acnes HL030PA1]
 gi|315110462|gb|EFT82438.1| thymidylate synthase [Propionibacterium acnes HL030PA2]
 gi|327325477|gb|EGE67281.1| thymidylate synthase [Propionibacterium acnes HL103PA1]
 gi|327451226|gb|EGE97880.1| thymidylate synthase [Propionibacterium acnes HL087PA3]
 gi|327452583|gb|EGE99237.1| thymidylate synthase [Propionibacterium acnes HL083PA2]
 gi|328754777|gb|EGF68393.1| thymidylate synthase [Propionibacterium acnes HL087PA1]
          Length = 269

 Score =  334 bits (856), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 161/270 (59%), Positives = 201/270 (74%), Gaps = 7/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG  IDQI+++V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVEQIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA I +MALPPCH LFQFYV   D G    LSCQLYQRSGD FLG+
Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269


>gi|119961084|ref|YP_948699.1| thymidylate synthase [Arthrobacter aurescens TC1]
 gi|171704616|sp|A1R8Y7|TYSY_ARTAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119947943|gb|ABM06854.1| thymidylate synthase [Arthrobacter aurescens TC1]
          Length = 267

 Score =  334 bits (856), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 158/261 (60%), Positives = 193/261 (73%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YEDLLRDVMANGTHKSDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVAVELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV ++   GVSIWDEWAD DGELGP+YGVQWRSWP  DG  IDQIS ++ +L A+P
Sbjct: 67  RGDSNVKWMQDQGVSIWDEWADADGELGPVYGVQWRSWPTPDGGHIDQISELMTNLAANP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHIVSAWNV+ +  MALPPCH  FQFYV +GKLSCQLYQRS D FLG+PFNIASY+L
Sbjct: 127 DSRRHIVSAWNVSELKDMALPPCHAFFQFYVADGKLSCQLYQRSADTFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A  +G + GEF+ T GDVH+Y+NH +Q   QLSR P   PQ+ I      +  + 
Sbjct: 187 LTRMVAQQLGLEPGEFVWTGGDVHVYDNHVDQVAEQLSREPYEYPQLKILRKPDSIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            +DF +  Y  H  I A ++V
Sbjct: 247 LDDFEVVDYRHHPTIKAPIAV 267


>gi|320539709|ref|ZP_08039373.1| thymidylate synthetase [Serratia symbiotica str. Tucson]
 gi|320030321|gb|EFW12336.1| thymidylate synthetase [Serratia symbiotica str. Tucson]
          Length = 264

 Score =  333 bits (855), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 150/264 (56%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMNKVLAEGTSKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S+++Q L+
Sbjct: 61  WFLNGDTNVAYLRENNVTIWDEWADENGDLGPVYGKQWRAWGATDGRQIDQLSNVLQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  + +MAL PCH   QFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QEPDSRRIIVSAWNVGELGQMALAPCHAFVQFYVAGGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCYLEVGDFVWTGGDTHLYSNHMEQTQLQLTREPRPLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +ED  +  Y+PH AI A V++
Sbjct: 241 DYCFEDLAIEGYDPHPAIKAPVAI 264


>gi|212639286|ref|YP_002315806.1| thymidylate synthase [Anoxybacillus flavithermus WK1]
 gi|226713165|sp|B7GI39|TYSY_ANOFW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|212560766|gb|ACJ33821.1| Thymidylate synthase [Anoxybacillus flavithermus WK1]
          Length = 264

 Score =  333 bits (855), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 155/264 (58%), Positives = 192/264 (72%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL  +++ G  + DRTG GT S FG Q+RFDL +GFPLLTTKK+H +S++HELL
Sbjct: 1   MKQYLQLLEDILQNGVYKDDRTGTGTLSVFGRQLRFDLREGFPLLTTKKLHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV+IWDEWAD+ G+LGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 61  WFLSGDTNIRYLKENGVTIWDEWADEKGDLGPVYGAQWRSWRGADGRTIDQISEVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA +D M LPPCH  FQFYV+NG LSC   QRS D FLG+PFNIAS
Sbjct: 121 TNPNSRRLLVSAWNVAELDHMKLPPCHYAFQFYVENGTLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     Q  E I T GDVHLY NH EQA LQL+R PR LP++II      + 
Sbjct: 181 YALLTYMVAQQCDLQPKELIFTGGDVHLYMNHIEQAKLQLTREPRPLPKLIIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A VSV
Sbjct: 241 EYRFEDFEIVDYDPHPHIKADVSV 264


>gi|238898972|ref|YP_002924654.1| thymidylate synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259550788|sp|C4K7G3|TYSY_HAMD5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|229466732|gb|ACQ68506.1| thymidylate synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 264

 Score =  333 bits (855), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++ V+  G+++ DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLHLMKKVLNEGTEKEDRTGTGTVSIFGHQMRFNLKEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + VSIW+EWADK G LGPIYG QWR+W   DG+ +DQ+S  ++ L+
Sbjct: 61  WFLKGDTNIAYLRENQVSIWEEWADKTGSLGPIYGKQWRAWGTPDGHQVDQLSQTLELLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV    LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPDSRRMIVSAWNVGELDKMALAPCHAFFQFYVVKKTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLL  M+A    F  G+F+ T GD+HLY+NH +QA LQL+R PR+LP ++IN     L 
Sbjct: 181 YSLLMHMIAQQCDFFLGDFVWTGGDIHLYSNHLDQAHLQLTREPRSLPHLLINRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF+L  Y P+ AI A V++
Sbjct: 241 DYHFEDFSLEKYNPYPAIKAPVAI 264


>gi|187736511|ref|YP_001878623.1| Thymidylate synthase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426563|gb|ACD05842.1| Thymidylate synthase [Akkermansia muciniphila ATCC BAA-835]
          Length = 271

 Score =  333 bits (854), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 158/271 (58%), Positives = 197/271 (72%), Gaps = 7/271 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL  V+  G+ R DRTG GT   FG Q R+DL  GFP LTTKK+H +S+++ELL
Sbjct: 1   MKQYLALLEDVLSNGAGREDRTGTGTIGVFGRQSRYDLRDGFPCLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ +L  +GVSIWDEWAD++G+LGP+YG QWR WP  DG  IDQI+ +V  L+
Sbjct: 61  WFLKGETNIKFLKDNGVSIWDEWADENGDLGPVYGAQWRCWPGNDGKPIDQIARLVDGLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-------LSCQLYQRSGDVFLG 173
            +P+SRRHIVSAWNVAL+D MALPPCH LFQF V   +       LS QLYQRS D+FLG
Sbjct: 121 HNPWSRRHIVSAWNVALVDDMALPPCHSLFQFCVIPAQPGEKKHGLSLQLYQRSADLFLG 180

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +PFNIASY+LL +M A V G++  EFIHT GD+HLY NH +QA  QLSR+PR LP M +N
Sbjct: 181 VPFNIASYALLLLMTAQVCGYEAREFIHTFGDLHLYRNHLDQAREQLSRTPRPLPVMKLN 240

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P +  +  F YEDF L  Y+P   I A +SV
Sbjct: 241 PEVKTIDGFHYEDFELVGYDPLPHIKAPISV 271


>gi|172041200|ref|YP_001800914.1| thymidylate synthase [Corynebacterium urealyticum DSM 7109]
 gi|171852504|emb|CAQ05480.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 273

 Score =  333 bits (854), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  ++  G+ + DRTG GT S FG Q+RF+L++ FPL+TTK VH KSVV ELLWFL
Sbjct: 14  YEDLLSKILAEGAKKDDRTGTGTTSLFGQQIRFNLAESFPLITTKSVHVKSVVGELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            GDSNV +L  +G+ IW+EWAD+DG+LGP+YGVQWRSWP  DG  IDQIS  ++ L+ +P
Sbjct: 74  SGDSNVRWLQDNGIRIWNEWADEDGDLGPVYGVQWRSWPTPDGRHIDQISQALEMLKQNP 133

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 134 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 193

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEFI T GD H+Y+NH EQ +LQLSR PR  PQ+ +     D+ S+ 
Sbjct: 194 LTHMFAQQTGLEVGEFIWTGGDCHIYDNHREQVELQLSREPRPYPQLELT-KAKDMFSYG 252

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED     Y+PH  I AKV+V
Sbjct: 253 FEDVNFVGYDPHPVIKAKVAV 273


>gi|119713736|gb|ABL97785.1| thymidylate synthase [uncultured marine bacterium HF10_29C11]
          Length = 257

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 148/257 (57%), Positives = 196/257 (76%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           +RH++  G ++ DRTG GT S FGYQMRFDLS+GFP++TTKK+H +S+VHELLWFL+GD+
Sbjct: 1   MRHILDNGVEKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLRSIVHELLWFLKGDT 60

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           NV YL  +GV IW+EWAD++G+LGP+YG QWR+W   DG +IDQ+   ++ ++ +P SRR
Sbjct: 61  NVKYLQENGVRIWNEWADENGDLGPVYGKQWRNWEAKDGRIIDQVERAIEQIKNNPNSRR 120

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            IVSAWNV  +D+MAL PCH  FQF+V +GKL+CQLYQRS DVFLG+PFNIASY+LLT M
Sbjct: 121 IIVSAWNVGELDEMALMPCHAFFQFHVADGKLNCQLYQRSADVFLGVPFNIASYALLTHM 180

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A V G + G F+HTLGD HLY NH +QA  Q+SR P  LP + ++ +I D+ +F +E  
Sbjct: 181 MAQVCGLEAGTFVHTLGDAHLYMNHLDQAREQISREPLPLPVLKLDQSIADIDAFTFEHI 240

Query: 248 TLRSYEPHAAILAKVSV 264
            +  YE H  I A +SV
Sbjct: 241 EIIGYEHHPHISAPISV 257


>gi|308178169|ref|YP_003917575.1| thymidylate synthase [Arthrobacter arilaitensis Re117]
 gi|307745632|emb|CBT76604.1| thymidylate synthase [Arthrobacter arilaitensis Re117]
          Length = 267

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/261 (60%), Positives = 189/261 (72%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  LLR V++ G+ + DRTG GT S FG Q+RFDL   FPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YETLLRDVLENGTAKEDRTGTGTLSVFGRQIRFDLQDSFPLITTKRVHFKSVAAELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L   GV IW+EWAD+DGELGP+YGVQWRSWP  +G  IDQIS +V SLR +P
Sbjct: 67  RGESNVKWLQDQGVRIWNEWADEDGELGPVYGVQWRSWPTPEGGYIDQISQLVDSLRNNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHIVSAWNVA I  MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRHIVSAWNVAEIQNMALPPCHVFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA  +  + GEFI T GDVH+Y NH EQ   QLSR P   P +  N     +  + 
Sbjct: 187 LTAMLAHQLDLEPGEFIWTGGDVHIYTNHVEQVKEQLSRDPYPYPTLSFNSKPDSIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            EDF++  Y+ H  I   V+V
Sbjct: 247 LEDFSINDYQHHPTIKGTVAV 267


>gi|314924266|gb|EFS88097.1| thymidylate synthase [Propionibacterium acnes HL001PA1]
          Length = 269

 Score =  333 bits (853), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 161/270 (59%), Positives = 200/270 (74%), Gaps = 7/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG  IDQI+++V  +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVDQIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA I +MALPPCH LFQFYV   D G    LSCQLYQRSGD FLG+
Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269


>gi|56420311|ref|YP_147629.1| thymidylate synthase [Geobacillus kaustophilus HTA426]
 gi|261419980|ref|YP_003253662.1| thymidylate synthase [Geobacillus sp. Y412MC61]
 gi|297530062|ref|YP_003671337.1| thymidylate synthase [Geobacillus sp. C56-T3]
 gi|319766795|ref|YP_004132296.1| thymidylate synthase [Geobacillus sp. Y412MC52]
 gi|62901180|sp|Q5KZ25|TYSY_GEOKA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|56380153|dbj|BAD76061.1| thymidylate synthetase [Geobacillus kaustophilus HTA426]
 gi|261376437|gb|ACX79180.1| thymidylate synthase [Geobacillus sp. Y412MC61]
 gi|297253314|gb|ADI26760.1| thymidylate synthase [Geobacillus sp. C56-T3]
 gi|317111661|gb|ADU94153.1| thymidylate synthase [Geobacillus sp. Y412MC52]
          Length = 264

 Score =  333 bits (853), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL  +++ G ++ DRTGVGT S FG Q+RF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 1   MRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGPIYG QWRSW   DG  IDQI+ +V+ ++
Sbjct: 61  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTIDQIAWVVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA +D+M LPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPNSRRLLVSAWNVAELDEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       GE I T GDVHLY NH EQA LQL+R PR LP+++I      + 
Sbjct: 181 YALLTHMIAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPPSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF +  Y PH  I A V+V
Sbjct: 241 DYEYDDFEIVGYNPHPTIKAPVAV 264


>gi|256394947|ref|YP_003116511.1| thymidylate synthase [Catenulispora acidiphila DSM 44928]
 gi|256361173|gb|ACU74670.1| thymidylate synthase [Catenulispora acidiphila DSM 44928]
          Length = 277

 Score =  332 bits (852), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 155/262 (59%), Positives = 195/262 (74%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL+ V+  G+ + DRTGVGTRS FG+Q+R+ L  GFPL+TTKKVH+KSV +ELLWF
Sbjct: 17  QYEDLLQRVLTSGTVKADRTGVGTRSLFGHQLRYRLQDGFPLITTKKVHFKSVAYELLWF 76

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG+ NV +L  HGVSIWDEWAD +G+LGP+YGVQWRSWP  DG  +DQI+ +++ LR D
Sbjct: 77  LRGEGNVRWLQEHGVSIWDEWADAEGDLGPVYGVQWRSWPTPDGRHVDQIAEVLRLLRTD 136

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNV  +  MALPPCH  FQFYV +G LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 137 PDSRRIVVSAWNVGELTNMALPPCHAFFQFYVADGALSCQLYQRSADMFLGVPFNIASYA 196

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A+  G   G+ + T GD+H+Y+NH EQA L L+R  R  P + + P    L  +
Sbjct: 197 LLTHMIAAQTGLAVGDLVWTGGDIHIYDNHVEQARLLLTREARLFPTLELKPAD-SLFDY 255

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YED  +  Y+PH AI A V+V
Sbjct: 256 SYEDIAVLGYDPHPAIKAPVAV 277


>gi|332765782|gb|EGJ95995.1| thymidylate synthase [Shigella flexneri 2930-71]
          Length = 257

 Score =  332 bits (852), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 147/257 (57%), Positives = 195/257 (75%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           ++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWFL+GD+
Sbjct: 1   MQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDT 60

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ DP SRR
Sbjct: 61  NIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRR 120

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LL  M
Sbjct: 121 IIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHM 180

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +R+EDF
Sbjct: 181 MAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDF 240

Query: 248 TLRSYEPHAAILAKVSV 264
            +  Y+PH  + A V++
Sbjct: 241 EIEGYDPHPGVKAPVAI 257


>gi|116671564|ref|YP_832497.1| thymidylate synthase [Arthrobacter sp. FB24]
 gi|171855203|sp|A0JZC7|TYSY_ARTS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116611673|gb|ABK04397.1| thymidylate synthase [Arthrobacter sp. FB24]
          Length = 267

 Score =  332 bits (851), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 155/261 (59%), Positives = 194/261 (74%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GT S FG QMRFDLS+ FPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YEDLLRDVLANGTHKSDRTGTGTLSVFGRQMRFDLSQSFPLITTKRVHFKSVAVELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV ++   GV+IW+EWAD DGELGP+YGVQWRSWP  DG  IDQI+ +V++L+++P
Sbjct: 67  RGETNVKWMQDQGVTIWNEWADADGELGPVYGVQWRSWPTPDGGHIDQIAELVENLKSNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHIVSAWNVA +  MALPPCH  FQFYV +GKLSCQLYQRS D FLG+PFNIASY+L
Sbjct: 127 DSRRHIVSAWNVAELQDMALPPCHAFFQFYVADGKLSCQLYQRSADTFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA  +G + GEF+ T GDVH+Y+NH +Q   QL R P   PQ+ I      +  + 
Sbjct: 187 LTCMLAQQVGLEPGEFVWTGGDVHIYDNHMDQVLKQLKREPYEYPQLKILRKPDSIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            +DF +  Y+ H  I A ++V
Sbjct: 247 LDDFEVVGYQHHPTIKAPIAV 267


>gi|269795625|ref|YP_003315080.1| thymidylate synthase [Sanguibacter keddieii DSM 10542]
 gi|269097810|gb|ACZ22246.1| thymidylate synthase [Sanguibacter keddieii DSM 10542]
          Length = 271

 Score =  332 bits (851), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 154/262 (58%), Positives = 197/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLRHV+  G+ + DRTG GTRS FG+QMRFDLS+GFPL+TTK+VH +SVV ELLWF
Sbjct: 11  QYEDLLRHVMAHGTRKSDRTGTGTRSVFGHQMRFDLSEGFPLVTTKRVHLRSVVGELLWF 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  +GV IW+EWAD DGELGP+YGVQWRSWP  DG  +DQ++ ++++LR +
Sbjct: 71  LRGDSNVGWLQENGVRIWNEWADDDGELGPVYGVQWRSWPTPDGQHVDQVAQVLETLRTN 130

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA +D MAL PCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 131 PDSRRMIVSAWNVADLDAMALMPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYA 190

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A  +G + G+F+ T GD H+Y+NH +Q    L R P   P++ +      L  +
Sbjct: 191 LLTHMVAQQVGLEVGDFVWTGGDCHVYDNHVDQVAELLGREPYPFPRLELR-QAASLFDY 249

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            ++D T+  Y+ H  I A V+V
Sbjct: 250 TFDDVTVEGYQHHPTIPAPVAV 271


>gi|242240430|ref|YP_002988611.1| thymidylate synthase [Dickeya dadantii Ech703]
 gi|242132487|gb|ACS86789.1| thymidylate synthase [Dickeya dadantii Ech703]
          Length = 264

 Score =  332 bits (851), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 149/264 (56%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G LGP+YG QWR+W   DG  IDQ+ +++  L+
Sbjct: 61  WFLNGDTNIGYLRDNKVSIWDEWADENGNLGPVYGKQWRAWGAADGRQIDQLQTVLHQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQL R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHLEQTRLQLGREPRPLPKLVIKRRPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH AI A V++
Sbjct: 241 DYQFDDFDIDGYDPHPAIKAPVAI 264


>gi|300858051|ref|YP_003783034.1| thymidylate synthase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685505|gb|ADK28427.1| Thymidylate synthase [Corynebacterium pseudotuberculosis FRC41]
 gi|302205773|gb|ADL10115.1| thymidylate synthase [Corynebacterium pseudotuberculosis C231]
 gi|302330331|gb|ADL20525.1| thymidylate synthase [Corynebacterium pseudotuberculosis 1002]
 gi|308276007|gb|ADO25906.1| thymidylate synthase [Corynebacterium pseudotuberculosis I19]
          Length = 265

 Score =  332 bits (850), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 158/261 (60%), Positives = 194/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  GS + DRTG GT S F  QMRFDLS+ FPL+TTKKV+W+ VV ELLWFL
Sbjct: 6   YEDLLRKILSEGSHKDDRTGTGTTSLFAQQMRFDLSESFPLITTKKVYWRGVVGELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G SN+++L  + + IWDEWA +DGELGPIYGVQWRSWP   G  +DQIS  +  L+ +P
Sbjct: 66  QGSSNITWLQDNNIHIWDEWASEDGELGPIYGVQWRSWPTPHGAHVDQISGALDMLKNNP 125

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNVA +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYS 
Sbjct: 126 DSRRNIVSAWNVAELDNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSA 185

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEFI T GD H+Y+NH EQ ++QLSR PR  PQ+ +     DL S+ 
Sbjct: 186 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHREQVEIQLSREPRPYPQLEL-AKAKDLFSYD 244

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + DF +  Y+PH AI A+V+V
Sbjct: 245 FADFQVIGYDPHPAIRAEVAV 265


>gi|313159542|gb|EFR58905.1| thymidylate synthase [Alistipes sp. HGB5]
          Length = 299

 Score =  332 bits (850), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 168/298 (56%), Positives = 197/298 (66%), Gaps = 35/298 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR +   G  R DRTG GT+  FG+QMRFDL++GFPLLTTKKV  K V+HELL
Sbjct: 1   MKQYLDLLRRIKTEGVVRGDRTGTGTKGVFGHQMRFDLAEGFPLLTTKKVFLKGVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------DKD----------------- 87
           WFL GD+N+ YL  +GV IWD  A                D+D                 
Sbjct: 61  WFLAGDTNIKYLVDNGVHIWDNDAFRYYNELCVRHGVLPVDRDTFLRAAQEGVESPVEGY 120

Query: 88  --GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
             G+L  +YG QWRSWP  DG V+DQI+  V  +R++P SRR +VSAWNVA ++ MALPP
Sbjct: 121 KFGDLNHVYGYQWRSWPKPDGTVVDQIAQAVGLIRSNPESRRILVSAWNVAEVEDMALPP 180

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           CH LFQFYV  GKLSCQLYQRS D FLG+PFNIASY+LLT+M A V G Q GEF+HTLGD
Sbjct: 181 CHVLFQFYVAEGKLSCQLYQRSADTFLGVPFNIASYALLTLMTAQVCGLQPGEFVHTLGD 240

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            HLY NH EQ D QL+R PR LP M +NP +  L  FRY DFTL  Y+P  AI A +S
Sbjct: 241 THLYLNHLEQVDEQLAREPRPLPVMRLNPAVKSLFDFRYGDFTLEGYDPWPAIKAPMS 298


>gi|88855422|ref|ZP_01130086.1| thymidylate synthase [marine actinobacterium PHSC20C1]
 gi|88815329|gb|EAR25187.1| thymidylate synthase [marine actinobacterium PHSC20C1]
          Length = 280

 Score =  332 bits (850), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 153/261 (58%), Positives = 195/261 (74%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR  +  G  + DRTG GTRS FG Q+RF+L++GFPL+TTK+VH+KS+ +ELLWFL
Sbjct: 20  YEDLLRDTLANGVHKSDRTGTGTRSVFGRQLRFNLAEGFPLITTKRVHFKSIAYELLWFL 79

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNVS+L  +GV+IW+EWAD+DGELGP+YGVQWRSWP   G  IDQIS ++  ++ +P
Sbjct: 80  RGESNVSWLRDNGVTIWNEWADEDGELGPVYGVQWRSWPTPSGEQIDQISEVIDQIKTNP 139

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWN A I +MAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 140 DSRRLIVSAWNPADIPQMALAPCHAFFQFYVANGKLSCQLYQRSADLFLGVPFNIASYAL 199

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G + G+F+ T GD H+Y+NH EQ   QL+R P   P++ I+     +  + 
Sbjct: 200 LTHMVAEQTGLEVGDFVWTGGDCHIYDNHIEQVTEQLTREPFGPPRLAISSTPDSVFGYA 259

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +EDF +  YE H AI A V+V
Sbjct: 260 FEDFEIVDYEHHPAIKAPVAV 280


>gi|328751979|gb|EGF65595.1| thymidylate synthase [Propionibacterium acnes HL025PA2]
          Length = 269

 Score =  332 bits (850), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 160/270 (59%), Positives = 201/270 (74%), Gaps = 7/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L+ + + IWDEWAD++G+LGP+YG QWRSWPD DG  IDQI+++V+ +R
Sbjct: 61  WFLRGDTNVGWLYDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVEQIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA I +MALPPCH LFQFYV   D G    LSCQLYQRSGD FLG+
Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269


>gi|296394396|ref|YP_003659280.1| thymidylate synthase [Segniliparus rotundus DSM 44985]
 gi|296181543|gb|ADG98449.1| thymidylate synthase [Segniliparus rotundus DSM 44985]
          Length = 270

 Score =  332 bits (850), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 156/261 (59%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G++R DRTG GT S FG+Q+R+DL+KGFPL+TTKKVH KS+VHELLWFL
Sbjct: 11  YEDLLRLVLERGAERPDRTGTGTLSLFGHQLRYDLAKGFPLVTTKKVHLKSIVHELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+NV +L   GV+IWDEWA +DG LGP+YG QWRSWP  DG V+DQI   V+ LR+DP
Sbjct: 71  RGDTNVRWLQERGVTIWDEWAREDGSLGPVYGAQWRSWPTPDGEVVDQIDQAVRLLRSDP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
           +SRR +VSAWNV  + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 131 HSRRIVVSAWNVGELSKMALAPCHILFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   G+F+ T GD HLY NH +QA  Q++R+P   P++ +      +  + 
Sbjct: 191 LTHMMAQQAGLHVGDFVWTGGDCHLYRNHLDQAREQIARTPYPYPRLELRQR-PSVFEYE 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +  Y  H AI A V+V
Sbjct: 250 YEDIQIVDYRSHPAIKAPVAV 270


>gi|19552071|ref|NP_600073.1| thymidylate synthase [Corynebacterium glutamicum ATCC 13032]
 gi|62389734|ref|YP_225136.1| thymidylate synthase [Corynebacterium glutamicum ATCC 13032]
 gi|145295015|ref|YP_001137836.1| thymidylate synthase [Corynebacterium glutamicum R]
 gi|25091465|sp|Q8NS38|TYSY_CORGL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172044395|sp|A4QCI7|TYSY_CORGB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|21323610|dbj|BAB98237.1| Thymidylate synthase [Corynebacterium glutamicum ATCC 13032]
 gi|41325069|emb|CAF19550.1| PROBABLE THYMIDYLATE SYNTHASE [Corynebacterium glutamicum ATCC
           13032]
 gi|140844935|dbj|BAF53934.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 266

 Score =  332 bits (850), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR + + GS + DRTG GT S FG Q+RFDL++GFPLLTTKKVH+ SVV ELLWFL
Sbjct: 7   YEDLLRKIAEEGSHKDDRTGTGTTSLFGQQIRFDLNEGFPLLTTKKVHFHSVVGELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +GDSNV +L  + + IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQIS  +++LR +P
Sbjct: 67  QGDSNVKWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISGALETLRNNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEFI T GD H+Y+NH EQ   QLSR  R  P + +N     +  + 
Sbjct: 187 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHKEQVAEQLSREARPYPTLELN-KAASMFEYS 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D T+  Y+PH  I  KV+V
Sbjct: 246 FDDITVSGYDPHPLIRGKVAV 266


>gi|297528628|ref|YP_003669903.1| thymidylate synthase [Geobacillus sp. C56-T3]
 gi|297251880|gb|ADI25326.1| thymidylate synthase [Geobacillus sp. C56-T3]
          Length = 264

 Score =  331 bits (849), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR ++K G ++ DRTG GT S FG Q+RFDL KGFPLLTTKK+H +S+++ELL
Sbjct: 1   MKQYLDLLRDILKNGIEKEDRTGTGTISVFGRQLRFDLQKGFPLLTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L+ +GV+IWDEWAD++GELG IYG QWR+W   DG  IDQI+ +++ ++
Sbjct: 61  WFLRGDTNVRFLNENGVTIWDEWADENGELGRIYGAQWRAWRTADGGTIDQITRVIEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WN+  +D+MALPPCH  FQFYV  G+LSC   QRS D FLG+PFNIAS
Sbjct: 121 HNPNSRRLLVSSWNIGELDQMALPPCHYAFQFYVAAGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GE I + GDVHLY NH EQA LQL+R P  LP++II      + 
Sbjct: 181 YALLTHMVAQQCDLEVGELIFSGGDVHLYKNHVEQAKLQLTRDPCPLPKLIIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF    Y+PH AI A +SV
Sbjct: 241 GYCYEDFEFVGYDPHPAIKAPISV 264


>gi|269957617|ref|YP_003327406.1| thymidylate synthase [Xylanimonas cellulosilytica DSM 15894]
 gi|269306298|gb|ACZ31848.1| thymidylate synthase [Xylanimonas cellulosilytica DSM 15894]
          Length = 272

 Score =  331 bits (849), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 159/261 (60%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LLR V+  G+ + DRTG GT S FG Q+R+DLS+GFPL+TTK+VH KSVV+ELLWFL
Sbjct: 13  YENLLRDVLAHGTHKDDRTGTGTTSVFGRQLRYDLSQGFPLITTKRVHLKSVVYELLWFL 72

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  HGVSIWDEWA   GELGP+YGVQWRSWP  DG  +DQIS +V  LR +P
Sbjct: 73  RGESNVRWLQEHGVSIWDEWASPAGELGPVYGVQWRSWPTPDGAHVDQISQVVDQLRTNP 132

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHIVSAWNVA I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 133 DSRRHIVSAWNVAEIKNMALPPCHLLFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 192

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH  Q   QLSR P    ++ + P    +  + 
Sbjct: 193 LTHMVAAQTGLDVGEFVWTGGDCHIYDNHLAQVTEQLSRDPYPYARLELAPRD-SIFDYT 251

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y+D  +  Y+ H AI A V+V
Sbjct: 252 YDDVVVHDYQHHPAIKAAVAV 272


>gi|300113048|ref|YP_003759623.1| thymidylate synthase [Nitrosococcus watsonii C-113]
 gi|299538985|gb|ADJ27302.1| thymidylate synthase [Nitrosococcus watsonii C-113]
          Length = 264

 Score =  331 bits (849), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  G ++ DRTG GT S FG+QMRFDL +GFPL+TT+K+H +S+  ELL
Sbjct: 1   MKPYLDLIQKILATGVEQDDRTGTGTWSIFGHQMRFDLRQGFPLVTTRKLHVRSIFIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP  DG  +DQ++ +   +R
Sbjct: 61  WFLRGETNVKYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGGYLDQMAKVSTQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P+SRRHIV A+N A +D+MALPPCH LFQFYV  G+LSCQLYQRS DVFLG PFNIAS
Sbjct: 121 HYPHSRRHIVVAYNPACVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGTPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT ++A   G   GEFI T GDVHLY NH E A LQL+R P  LP++ I      L 
Sbjct: 181 YALLTHLMAQQCGLGVGEFIWTGGDVHLYRNHLEAARLQLTREPLPLPRLQIKRRPSSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++Y+D  +  Y+ + AI A VSV
Sbjct: 241 EYQYDDLEIVDYQSYPAIKAAVSV 264


>gi|209363794|ref|YP_001423860.2| thymidylate synthase [Coxiella burnetii Dugway 5J108-111]
 gi|207081727|gb|ABS77420.2| thymidylate synthase [Coxiella burnetii Dugway 5J108-111]
          Length = 296

 Score =  331 bits (848), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 149/264 (56%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+ ++  G  + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL
Sbjct: 33  MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 92

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W   DG  +DQ+  +++ ++
Sbjct: 93  WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 152

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS
Sbjct: 153 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 212

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A     + GEFI + GD H+YN H +Q   QLSR PR LPQ+IIN +   L 
Sbjct: 213 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 272

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + + DF++ +Y PH AI A V+V
Sbjct: 273 DYNFNDFSIVNYHPHPAIKAPVAV 296


>gi|325676379|ref|ZP_08156058.1| thymidylate synthase [Rhodococcus equi ATCC 33707]
 gi|325552940|gb|EGD22623.1| thymidylate synthase [Rhodococcus equi ATCC 33707]
          Length = 264

 Score =  331 bits (848), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 159/265 (60%), Positives = 197/265 (74%), Gaps = 2/265 (0%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           MH  Y DLLR V+  G+ + DRTG GTRS FG+QMR+DL++GFPL+TTKKVH KS+V+EL
Sbjct: 1   MHSPYEDLLRLVMDTGTAKADRTGTGTRSVFGHQMRWDLAEGFPLITTKKVHLKSIVYEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           LWFLRG+SNV +L  HGV+IWDEWAD DGELGP+YGVQWRSWP   G  IDQI+ +V++L
Sbjct: 61  LWFLRGESNVKWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITKVVETL 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR IVSAWNVA +D MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 121 KTNPDSRRIIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LLT M+A     + G+FI T GD H+Y+NH +Q   QLSR P   P + +N     +
Sbjct: 181 SYALLTHMVAQQADLEVGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLNKRD-SI 239

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + +ED  +  Y  H AI A V+V
Sbjct: 240 FDYTFEDVEIVDYRHHPAIKAPVAV 264


>gi|262380134|ref|ZP_06073289.1| thymidylate synthase [Acinetobacter radioresistens SH164]
 gi|262298328|gb|EEY86242.1| thymidylate synthase [Acinetobacter radioresistens SH164]
          Length = 280

 Score =  330 bits (847), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 201/280 (71%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+H+++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRQYLDLLQHILEHGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA  +         GELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPAGELGPVYGHQWRNFGATQNEDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             N +DQIS ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V NGKLSCQLY
Sbjct: 121 QKNGVDQISWLINEIKTNPNSRRLIVSGWNPKEASQVALPPCHTLFQFFVQNGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V   Q G+F+ T GD HLY NHF+QA LQL R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLQVGDFVWTGGDTHLYANHFDQARLQLGRDP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP +  +  F++ED  + +Y  H+AI A V+V
Sbjct: 241 LELCQLKLNPEVKSIFDFKFEDIEIINYHSHSAIKAPVAV 280


>gi|296274222|ref|YP_003656853.1| thymidylate synthase [Arcobacter nitrofigilis DSM 7299]
 gi|296098396|gb|ADG94346.1| thymidylate synthase [Arcobacter nitrofigilis DSM 7299]
          Length = 287

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 153/287 (53%), Positives = 202/287 (70%), Gaps = 23/287 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFPL+TTKK H K+++ ELL
Sbjct: 1   MKQYLDLMKHVLENGTLKEDRTGTGTKSVFGYQMRFDLSEGFPLVTTKKCHLKAIISELL 60

Query: 61  WFLRGDSN---VSYLH--------------------RHGVSIWDEWADKDGELGPIYGVQ 97
           WFL G ++   ++ +H                      GV++  E +D   ELGP+YG Q
Sbjct: 61  WFLEGSTDERRLAEIHYGDKAENIIGKKTVWTANADNQGVALGYENSDTVKELGPVYGSQ 120

Query: 98  WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
           WRSW   DG  IDQ+S +++ ++ +P SRR I+SAWNVA I+KMALPPCH  FQFYV NG
Sbjct: 121 WRSWKTNDGKAIDQVSELIEQIKNNPDSRRLILSAWNVAEIEKMALPPCHTFFQFYVANG 180

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           KLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V   + G+F+HT GD HLY+NH EQA+
Sbjct: 181 KLSCQLYQRSADIFLGVPFNIASYALLTMMVAQVCDLEVGDFVHTFGDAHLYSNHLEQAN 240

Query: 218 LQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           LQ++R P   P M INP+I ++  F+ EDF L +Y+ H  I   ++V
Sbjct: 241 LQITREPFPKPTMKINPDIKNIFDFKMEDFELSNYQAHEHIKGVMAV 287


>gi|124267240|ref|YP_001021244.1| thymidylate synthase [Methylibium petroleiphilum PM1]
 gi|171769837|sp|A2SHH0|TYSY_METPP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|124260015|gb|ABM95009.1| thymidylate synthase [Methylibium petroleiphilum PM1]
          Length = 283

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 159/269 (59%), Positives = 193/269 (71%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D LRHV   G  + DRTG GT S FG+QMRFDL +GFPL+TTKKVH KS+V ELLWF
Sbjct: 15  QYEDFLRHVRDHGVVKADRTGTGTTSVFGHQMRFDLREGFPLVTTKKVHLKSIVLELLWF 74

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD N ++L   GV+IWDEWA  DG+LGP+YGVQWRSWP  DG  +DQI+ +V+ L+ +
Sbjct: 75  LRGDGNATWLQERGVTIWDEWAAPDGDLGPVYGVQWRSWPTPDGGHVDQIAEVVKQLKTN 134

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + KMAL PCH  FQFYV         G+LSCQLYQRS D+FLG+P
Sbjct: 135 PDSRRIIVSAWNVADLPKMALMPCHAFFQFYVAPGDSPSARGRLSCQLYQRSADIFLGVP 194

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT MLA     + G+F+ T GD H+Y+NH EQ +LQLSR+PR  P + I   
Sbjct: 195 FNIASYALLTHMLAQQCDLEVGDFVWTGGDCHIYSNHREQVELQLSRAPRPYPTLQIKRR 254

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  + YEDF +  Y+PH AI A V+V
Sbjct: 255 PPSIFDYAYEDFEIIGYDPHPAIKAPVAV 283


>gi|169630173|ref|YP_001703822.1| thymidylate synthase (ThyA) [Mycobacterium abscessus ATCC 19977]
 gi|169242140|emb|CAM63168.1| Thymidylate synthase (ThyA) [Mycobacterium abscessus]
          Length = 266

 Score =  330 bits (846), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 156/261 (59%), Positives = 196/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG+Q+R+ L  GFPL+TTKKVH KSV++ELLWFL
Sbjct: 7   YEDLLRLVLEEGTPKADRTGTGTRSVFGHQLRYRLEDGFPLITTKKVHLKSVIYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L   GV+IWDEWA + GELGP+YGVQWR+WP   G  IDQIS+ +  LR +P
Sbjct: 67  RGESNVRWLQERGVTIWDEWASEAGELGPVYGVQWRAWPTPSGEHIDQISAALDLLRTNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   G+F+ T GD H+Y+NH EQ   QLSR P   P +++      +  +R
Sbjct: 187 LTHMMAAQAGLGVGDFVWTGGDCHIYDNHVEQVTEQLSRDPYPYPTLVLAQRD-SIFDYR 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED T+ +Y+ HAAI A V+V
Sbjct: 246 YEDITVENYQHHAAIKAPVAV 266


>gi|21672690|ref|NP_660757.1| thymidylate synthase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25091456|sp|Q8K9C3|TYSY_BUCAP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|21623330|gb|AAM67968.1| thymidylate synthase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 264

 Score =  330 bits (846), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 151/264 (57%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ +IK G+ ++DRTG GT S FG+ M+FDL KGFPL+TTKK H  S++HELL
Sbjct: 1   MKQYLDLIKKIIKNGNSKKDRTGTGTLSIFGHHMKFDLKKGFPLITTKKCHIPSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ YL+ + +SIWD WADK G+LGPIYG QWRSW   +G  IDQI ++++ ++
Sbjct: 61  WFLRGETNIKYLNENKISIWDNWADKFGDLGPIYGKQWRSWDTSNGKKIDQIKNVLKQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR +VS+WNV  IDKM+L PCH LFQFYV   KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 EDPDSRRILVSSWNVGEIDKMSLAPCHILFQFYVLKKKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y++L  M+A     Q GEF+ T GDVHLY NH E A  Q+ R P+ LP++II      L 
Sbjct: 181 YAILIHMIAQQCNLQVGEFLWTGGDVHLYKNHVELAKKQILRIPKKLPELIILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+P++ I  K+SV
Sbjct: 241 QYSFEDFKIVGYKPYSLIKGKISV 264


>gi|226951963|ref|ZP_03822427.1| thymidylate synthase [Acinetobacter sp. ATCC 27244]
 gi|226837301|gb|EEH69684.1| thymidylate synthase [Acinetobacter sp. ATCC 27244]
          Length = 300

 Score =  330 bits (846), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 161/280 (57%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 21  MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 80

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA  +         GELGP+YG QWR++         Y
Sbjct: 81  WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFDRPEGELGPVYGHQWRNFGATQNEDGSY 140

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             N  DQI  ++  ++ +P SRR IVS WN     K+ALPPCH LFQF+V + KLSCQLY
Sbjct: 141 QQNGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVQDNKLSCQLY 200

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQLSR P
Sbjct: 201 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSRDP 260

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I D+  F++ED  +  YE H AI A V+V
Sbjct: 261 LPLCQLKLNPEITDIFDFKFEDIEIVGYESHPAIKAPVAV 300


>gi|325964203|ref|YP_004242109.1| thymidylate synthase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470290|gb|ADX73975.1| thymidylate synthase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 267

 Score =  330 bits (846), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 153/261 (58%), Positives = 192/261 (73%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GT S FG QMRFDLSK FPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YEDLLRDVLASGTHKSDRTGTGTTSVFGRQMRFDLSKSFPLITTKRVHFKSVAVELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV ++   GV+IW+EWAD DG+LGP+YGVQWRSWP  DG  IDQI+ ++ SL+++P
Sbjct: 67  RGETNVKWMQDQGVTIWNEWADADGDLGPVYGVQWRSWPTPDGGHIDQIAELMDSLKSNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRH+VSAWNV+ +  MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRHVVSAWNVSELRDMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A  +G + GEF+ T GDVH+Y NH +Q   QL R P   PQ+ I      +  + 
Sbjct: 187 LTCMVAQQVGLEPGEFVWTGGDVHIYENHMDQVLKQLEREPYEYPQLKILRKPASIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            EDF +  Y  H  I A ++V
Sbjct: 247 LEDFEVVGYRHHPTIKAPIAV 267


>gi|29654838|ref|NP_820530.1| thymidylate synthase [Coxiella burnetii RSA 493]
 gi|161831612|ref|YP_001597383.1| thymidylate synthase [Coxiella burnetii RSA 331]
 gi|165919218|ref|ZP_02219304.1| thymidylate synthase [Coxiella burnetii RSA 334]
 gi|62901362|sp|Q83BG2|TYSY_COXBU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036931|sp|A9KF61|TYSY_COXBN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036932|sp|A9N980|TYSY_COXBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|29542106|gb|AAO91044.1| thymidylate synthase [Coxiella burnetii RSA 493]
 gi|161763479|gb|ABX79121.1| thymidylate synthase [Coxiella burnetii RSA 331]
 gi|165917079|gb|EDR35683.1| thymidylate synthase [Coxiella burnetii RSA 334]
          Length = 264

 Score =  330 bits (846), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 149/264 (56%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+ ++  G  + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL
Sbjct: 1   MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W   DG  +DQ+  +++ ++
Sbjct: 61  WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A     + GEFI + GD H+YN H +Q   QLSR PR LPQ+IIN +   L 
Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + + DF++ +Y PH AI A V+V
Sbjct: 241 DYNFNDFSIVNYHPHPAIKAPVAV 264


>gi|310642333|ref|YP_003947091.1| thymidylate synthase 2 [Paenibacillus polymyxa SC2]
 gi|309247283|gb|ADO56850.1| Thymidylate synthase 2 [Paenibacillus polymyxa SC2]
          Length = 264

 Score =  330 bits (845), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL  +++ G  + DRTG GT S FG Q+RFDL+KGFPL+TTK+VH KSV+HELL
Sbjct: 1   MRNYLELLEDILENGVKKEDRTGTGTLSVFGRQLRFDLAKGFPLVTTKRVHLKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  +GVSIWDEWAD+ G LGP+YG QWR+W   DG  IDQI++++++++
Sbjct: 61  WFLRGDTNIAYLKENGVSIWDEWADEQGNLGPVYGSQWRAWETPDGQHIDQIANVIEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA I+ M LPPCH +FQFYV  GKLSC L  RS D FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVAEIESMKLPPCHFVFQFYVAGGKLSCMLTMRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + GEFI + GDVH+Y+NH +Q   QL R P  LPQ+ I      + 
Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHIQQVHTQLERDPYPLPQLKILRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +YE H  I A V++
Sbjct: 241 DYTYEDFVFENYEHHPGIKAPVAI 264


>gi|153208297|ref|ZP_01946676.1| thymidylate synthase [Coxiella burnetii 'MSU Goat Q177']
 gi|212219260|ref|YP_002306047.1| thymidylate synthase [Coxiella burnetii CbuK_Q154]
 gi|120576081|gb|EAX32705.1| thymidylate synthase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013522|gb|ACJ20902.1| thymidylate synthase [Coxiella burnetii CbuK_Q154]
          Length = 264

 Score =  330 bits (845), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 149/264 (56%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+ ++  G  + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL
Sbjct: 1   MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W   DG  +DQ+  +++ ++
Sbjct: 61  WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A     + GEFI + GD H+YN H +Q   QLSR PR LPQ+IIN +   L 
Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINCDPSSLY 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + + DF++ +Y PH AI A V+V
Sbjct: 241 DYNFNDFSIVNYHPHPAIKAPVAV 264


>gi|38233422|ref|NP_939189.1| thymidylate synthase [Corynebacterium diphtheriae NCTC 13129]
 gi|62901324|sp|Q6NIF2|TYSY_CORDI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|38199682|emb|CAE49341.1| thymidylate synthase [Corynebacterium diphtheriae]
          Length = 270

 Score =  330 bits (845), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 154/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ GS + DRTG GT S FG QMRFDL++ FPL+TTKKV+WK V+ ELLWFL
Sbjct: 11  YEDLLRTILEQGSHKDDRTGTGTTSLFGQQMRFDLTEAFPLITTKKVYWKGVIGELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G SNV +L +  + IWDEWA ++GELGP+YGVQWRSWP  DG  +DQI+  +  L+ +P
Sbjct: 71  QGSSNVRWLQKRNIHIWDEWASEEGELGPVYGVQWRSWPTPDGQHVDQIAQALDILKNNP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNVA ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYS 
Sbjct: 131 DSRRNIVSAWNVADLNNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSA 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA   G + GEFI T GD H+Y+NH EQ   QLSR PR  PQ+ +      +  + 
Sbjct: 191 LTHMLAQQAGLKVGEFIWTGGDCHIYDNHREQVLTQLSREPRPYPQLTLR-KASSIFDYD 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++DFT+  Y+PH AI  +V+V
Sbjct: 250 FDDFTIEGYDPHPAIRGEVAV 270


>gi|312138557|ref|YP_004005893.1| thymidylate synthase [Rhodococcus equi 103S]
 gi|311887896|emb|CBH47208.1| thymidylate synthase [Rhodococcus equi 103S]
          Length = 273

 Score =  330 bits (845), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 156/261 (59%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR+DL++GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 14  YEDLLRLVMDTGTAKADRTGTGTRSVFGHQMRWDLAEGFPLITTKKVHLKSIVYELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  HGV+IWDEWAD DGELGP+YGVQWRSWP   G  IDQI+ ++++L+ +P
Sbjct: 74  RGESNVKWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITKVIETLKTNP 133

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNVA +D MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 134 DSRRIIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 193

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A     + G+FI T GD H+Y+NH +Q   QLSR P   P + +N     +  + 
Sbjct: 194 LTHMVAQQADLEVGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLNKRD-SIFDYT 252

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y  H AI A V+V
Sbjct: 253 FEDVEIVDYRHHPAIKAPVAV 273


>gi|317125309|ref|YP_004099421.1| thymidylate synthase [Intrasporangium calvum DSM 43043]
 gi|315589397|gb|ADU48694.1| thymidylate synthase [Intrasporangium calvum DSM 43043]
          Length = 271

 Score =  330 bits (845), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 158/271 (58%), Positives = 201/271 (74%), Gaps = 7/271 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV+  G ++ DRTG GT S FG+QMRFDL+ GFP +TTK++H +S++ ELL
Sbjct: 1   MRQYLDLLDHVLTHGQEKSDRTGTGTLSVFGHQMRFDLADGFPAMTTKRLHLRSIIGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L   G++IWDEWAD  G+LGPIYG QWRSWP  DG  +DQI+ +++ +R
Sbjct: 61  WFLRGDTNVRWLQERGITIWDEWADAKGDLGPIYGYQWRSWPTPDGRRVDQIARVIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DNG---KLSCQLYQRSGDVFLG 173
            +P SRRHIVSAWNVA +D MALPPCH +FQFYV    ++G   +LSCQLYQRS D+FLG
Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHTMFQFYVHPATESGGPRRLSCQLYQRSADIFLG 180

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +PFNIASY+LLT M+A +   + GEF+HTLGD HLY NH +QA LQL+R+P  LP M I 
Sbjct: 181 VPFNIASYALLTQMIAQLTDLEPGEFVHTLGDAHLYLNHLDQARLQLTRTPHPLPTMRIT 240

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P   D+ +F  +DF L  Y     I A ++V
Sbjct: 241 PGKKDIDAFDIDDFVLEDYVADPGIKAPIAV 271


>gi|212212099|ref|YP_002303035.1| thymidylate synthase [Coxiella burnetii CbuG_Q212]
 gi|212010509|gb|ACJ17890.1| thymidylate synthase [Coxiella burnetii CbuG_Q212]
          Length = 264

 Score =  330 bits (845), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 149/264 (56%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+ ++  G  + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL
Sbjct: 1   MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W   DG  +DQ+  +++ ++
Sbjct: 61  WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A     + GEFI + GD H+YN H +Q   QLSR PR LPQ+IIN +   L 
Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + + DF++ +Y PH AI A V+V
Sbjct: 241 DYNFNDFSIVNYHPHLAIKAPVAV 264


>gi|326316306|ref|YP_004233978.1| thymidylate synthase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373142|gb|ADX45411.1| thymidylate synthase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 279

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 160/269 (59%), Positives = 196/269 (72%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GTRS FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF
Sbjct: 11  QYEDFMRHVYTHGIAKGDRTGTGTRSVFGHQMRFDLNEGFPLVTTKKVHLKSIITELLWF 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G S+  +L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS +V++LR +
Sbjct: 71  LTGSSSNHWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISQVVETLRTN 130

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA +DKMAL PCH  FQFYV       + G+LSCQLYQRS D+FLG+P
Sbjct: 131 PDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPPQAAGERGRLSCQLYQRSADIFLGVP 190

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A       G+FI T GD H+Y+NHFEQ +LQL+R+P   P + I   
Sbjct: 191 FNIASYALLTHMMAQQCNLDVGDFIWTGGDCHIYSNHFEQVELQLARAPHPYPTLHILRR 250

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              L  +R+EDF +R Y  H AI A V+V
Sbjct: 251 PDSLFDYRFEDFEVRDYAHHPAIKAPVAV 279


>gi|255321180|ref|ZP_05362346.1| thymidylate synthase [Acinetobacter radioresistens SK82]
 gi|255301734|gb|EET80985.1| thymidylate synthase [Acinetobacter radioresistens SK82]
          Length = 280

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 160/280 (57%), Positives = 199/280 (71%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+H+++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRQYLDLLQHILEHGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA  +         GELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPTGELGPVYGHQWRNFGATQNEDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             N  DQIS ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V NGKLSCQLY
Sbjct: 121 QQNGFDQISWLINEIKTNPNSRRLIVSGWNPKEASQVALPPCHTLFQFFVQNGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V   Q G+F+ T GD HLY NHFEQA LQL R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLQVGDFVWTGGDTHLYANHFEQARLQLGRDP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP +  +  F++ED  + +Y  H AI A V+V
Sbjct: 241 LELCQLKLNPEVKSIFDFKFEDIEIINYHSHPAIKAPVAV 280


>gi|262375002|ref|ZP_06068236.1| thymidylate synthase [Acinetobacter lwoffii SH145]
 gi|262310015|gb|EEY91144.1| thymidylate synthase [Acinetobacter lwoffii SH145]
          Length = 280

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 161/280 (57%), Positives = 200/280 (71%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+H++  G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL
Sbjct: 1   MRQYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + VSIWDEWA  +         GELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGASKNADNSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V NGKLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVHNGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V   + G+F+ T GD HLY+NHFEQA LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLEVGDFVWTGGDTHLYSNHFEQAQLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I DL  F++ED  +  YE H  I A V+V
Sbjct: 241 LGLCQLKLNPEIKDLFDFKFEDIEIVGYESHPGIKAPVAV 280


>gi|305681854|ref|ZP_07404658.1| thymidylate synthase [Corynebacterium matruchotii ATCC 14266]
 gi|305658327|gb|EFM47830.1| thymidylate synthase [Corynebacterium matruchotii ATCC 14266]
          Length = 272

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 156/261 (59%), Positives = 192/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S F  Q+RFDL++ FPL+TTK+VH+ SVV ELLWFL
Sbjct: 13  YEDLLRKILAEGTHKNDRTGTGTTSLFAQQLRFDLAESFPLITTKQVHFHSVVGELLWFL 72

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            G SNV++L  +G+ IW+EWAD  GELGP+YGVQWRSWP  DG  +DQIS+ +  LRADP
Sbjct: 73  SGSSNVAWLQENGIRIWNEWADDQGELGPVYGVQWRSWPTPDGGYVDQISASLAMLRADP 132

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  + KMALPPCH LFQ YV + +LSCQ+YQRS D+FLG+PFNIASYSL
Sbjct: 133 DSRRNIVSAWNVGELPKMALPPCHLLFQLYVADNRLSCQVYQRSADMFLGVPFNIASYSL 192

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA   G + GE I T GD H+Y+NH EQ  LQL+R PR  PQ+ +     DL S+ 
Sbjct: 193 LTHMLAQQAGLRVGELIWTGGDCHIYDNHREQVALQLTRDPRPYPQLELR-KAADLFSYT 251

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + D  +R Y PH  I A+VSV
Sbjct: 252 FSDVAVRGYNPHPRIPARVSV 272


>gi|308069291|ref|YP_003870896.1| thymidylate synthase (TS) (TSase) [Paenibacillus polymyxa E681]
 gi|305858570|gb|ADM70358.1| Thymidylate synthase (TS) (TSase) [Paenibacillus polymyxa E681]
          Length = 264

 Score =  329 bits (844), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL  +++ G  + DRTG GT S FG Q+RFDL+KGFPL+TTK+VH KSV+HELL
Sbjct: 1   MRNYLELLEDILENGVKKEDRTGTGTLSVFGRQLRFDLAKGFPLVTTKRVHLKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD+ G LGP+YG QWRSW   DG  IDQI++++++++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADEQGNLGPVYGSQWRSWETTDGQHIDQIANVIEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA I+ M LPPCH +FQFYV  GKLSC L  RS D FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVAEIESMKLPPCHFVFQFYVAGGKLSCMLTMRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + GEFI + GDVH+Y+NH +Q   QL R P  LPQ+ I      + 
Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHMQQVHTQLERDPYPLPQLKILRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF   +YE H  I A V++
Sbjct: 241 DYTYDDFAFENYEYHPGIKAPVAI 264


>gi|313886932|ref|ZP_07820635.1| thymidylate synthase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923629|gb|EFR34435.1| thymidylate synthase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 265

 Score =  329 bits (844), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 158/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G++R DRTG GT   FG+QM FDL+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119
           WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G  IDQ+   +  +
Sbjct: 61  WFLKGDTNLQYLHDNKVSIWDEWADETGDLGPIYGAQWRHWFDPHTGQTIDQMQQAIDLI 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWNVA +  M L PCHCL Q+YV   KL  QLYQRS D+FLG+PFNIA
Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGNKLDLQLYQRSADIFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M +      L
Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F Y+DFTL  Y P+  I A VSV
Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSV 265


>gi|330720247|gb|EGG98613.1| Thymidylate synthase [gamma proteobacterium IMCC2047]
          Length = 277

 Score =  329 bits (843), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 151/266 (56%), Positives = 193/266 (72%), Gaps = 2/266 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G D+ DRTGVGTRS FG Q+RFDL  GFPL+TTK  H KS++HELL
Sbjct: 12  MQQYLDLMQDVLDNGVDKSDRTGVGTRSVFGRQLRFDLGAGFPLVTTKNCHLKSIIHELL 71

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD+ G LGP+YG QWR+W   DG  +DQIS +V +L+
Sbjct: 72  WFLQGDTNIRYLKENGVTIWDEWADEKGNLGPVYGEQWRAWRKPDGGTVDQISKLVHNLK 131

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V A+N  + D+MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 132 HNPDSRRLLVVAYNPGVADEMALPPCHSLFQFYVANGRLSCQLYQRSADLFLGVPFNIAS 191

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPRTLPQMIINPNIVD 238
           Y++LT MLA       GEF+HT GD HLY+NH     +  QL R PR LP++ I      
Sbjct: 192 YAILTHMLAQQADLDVGEFVHTFGDCHLYHNHLTDDIVHEQLRRKPRKLPKLKIKRKPQS 251

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  + YEDF +  Y+P+  I A ++V
Sbjct: 252 MFDYCYEDFEIEGYDPYPTIKAPIAV 277


>gi|50083753|ref|YP_045263.1| thymidylate synthase [Acinetobacter sp. ADP1]
 gi|62901304|sp|Q6FER7|TYSY_ACIAD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|49529729|emb|CAG67441.1| thymidylate synthase (TS) (TSase) [Acinetobacter sp. ADP1]
          Length = 280

 Score =  329 bits (843), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 160/280 (57%), Positives = 198/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL
Sbjct: 1   MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  H VSIWDEWA  +         GELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDHKVSIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGATQNSDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V +GKLSCQLY
Sbjct: 121 KNDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I DL  F++ED  +  Y+ H AI A V+V
Sbjct: 241 LPLCQLKLNPEITDLFDFKFEDIEIVDYQSHPAIKAPVAV 280


>gi|281415580|ref|ZP_06247322.1| thymidylate synthase [Micrococcus luteus NCTC 2665]
          Length = 273

 Score =  329 bits (843), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 156/267 (58%), Positives = 193/267 (72%), Gaps = 6/267 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  V+  G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YEDLLADVMAHGAVKTDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVALELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQI+ +V+ +R +P
Sbjct: 67  RGDSNVRWLQERGVRIWNEWADEDGELGPVYGVQWRSWPTPDGGHIDQIAKVVEQIRTNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------NGKLSCQLYQRSGDVFLGIPFN 177
            SRRHIV+AWN A +D+MALPPCH LFQFYV        G+LSCQLYQRS D+FLG+PFN
Sbjct: 127 DSRRHIVTAWNPAEVDEMALPPCHALFQFYVSPGQDGAPGRLSCQLYQRSADLFLGVPFN 186

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           IASY+LLT+M+A   G   GEF+ T GDVH+Y NH EQ   QLSR P   P++ +     
Sbjct: 187 IASYALLTVMVAQQTGLTPGEFVWTGGDVHIYANHEEQVREQLSREPYPYPRLRLRRTPA 246

Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +  + YEDF +  Y  H  I A ++V
Sbjct: 247 SIFDYDYEDFEVLDYRHHPTITAPIAV 273


>gi|239918228|ref|YP_002957786.1| thymidylate synthase [Micrococcus luteus NCTC 2665]
 gi|289705051|ref|ZP_06501462.1| thymidylate synthase [Micrococcus luteus SK58]
 gi|239839435|gb|ACS31232.1| thymidylate synthase [Micrococcus luteus NCTC 2665]
 gi|289558214|gb|EFD51494.1| thymidylate synthase [Micrococcus luteus SK58]
          Length = 276

 Score =  329 bits (843), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 156/267 (58%), Positives = 193/267 (72%), Gaps = 6/267 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  V+  G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV  ELLWFL
Sbjct: 10  YEDLLADVMAHGAVKTDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVALELLWFL 69

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQI+ +V+ +R +P
Sbjct: 70  RGDSNVRWLQERGVRIWNEWADEDGELGPVYGVQWRSWPTPDGGHIDQIAKVVEQIRTNP 129

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------NGKLSCQLYQRSGDVFLGIPFN 177
            SRRHIV+AWN A +D+MALPPCH LFQFYV        G+LSCQLYQRS D+FLG+PFN
Sbjct: 130 DSRRHIVTAWNPAEVDEMALPPCHALFQFYVSPGQDGAPGRLSCQLYQRSADLFLGVPFN 189

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           IASY+LLT+M+A   G   GEF+ T GDVH+Y NH EQ   QLSR P   P++ +     
Sbjct: 190 IASYALLTVMVAQQTGLTPGEFVWTGGDVHIYANHEEQVREQLSREPYPYPRLRLRRTPA 249

Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +  + YEDF +  Y  H  I A ++V
Sbjct: 250 SIFDYDYEDFEVLDYRHHPTITAPIAV 276


>gi|77163769|ref|YP_342294.1| thymidylate synthase [Nitrosococcus oceani ATCC 19707]
 gi|254436106|ref|ZP_05049613.1| thymidylate synthase [Nitrosococcus oceani AFC27]
 gi|123595153|sp|Q3JEI2|TYSY_NITOC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|76882083|gb|ABA56764.1| thymidylate synthase [Nitrosococcus oceani ATCC 19707]
 gi|207089217|gb|EDZ66489.1| thymidylate synthase [Nitrosococcus oceani AFC27]
          Length = 264

 Score =  329 bits (843), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L++ ++  G +R DRTG GT S FG+QMRFDL +GFPL+TTKK+H +++  ELL
Sbjct: 1   MKPYLELIQKILDTGVERDDRTGTGTWSIFGHQMRFDLRQGFPLITTKKLHIRAIFIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP  DG  +DQ++  +  +R
Sbjct: 61  WFLRGETNVKYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGGYLDQMAKTLTQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P+SRRH+V A+N A +D+MALPPCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NHPHSRRHVVVAYNPACVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT ++A       GEF+ T GDVHLY NH E A LQL+R P +LP + I      L 
Sbjct: 181 YALLTHLIAQQCDLDVGEFVWTGGDVHLYRNHLEPARLQLTREPLSLPHLRIKRRPPSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++Y+D  +  Y+ + AI A +SV
Sbjct: 241 EYQYDDLEIVDYQSYPAIKAAISV 264


>gi|294649226|ref|ZP_06726664.1| thymidylate synthase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824893|gb|EFF83658.1| thymidylate synthase [Acinetobacter haemolyticus ATCC 19194]
          Length = 280

 Score =  328 bits (842), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 161/280 (57%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA  +         GELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGATQNEDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             N  DQI  ++  ++ +P SRR IVS WN     K+ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 QQNGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSRDP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEITDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|118602621|ref|YP_903836.1| thymidylate synthase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166231728|sp|A1AWQ8|TYSY_RUTMC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|118567560|gb|ABL02365.1| thymidylate synthase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 264

 Score =  328 bits (842), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD LR V   G+++ DRTG+GT S FGYQMRFDLS GFPL+TTK+VH  SVVHELL
Sbjct: 1   MKQYLDFLRLVKNTGTNKTDRTGIGTTSLFGYQMRFDLSDGFPLITTKRVHLPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL  +GV IW+EWADK+G+LGPIYGVQWR+W +  G  IDQI  +++ ++
Sbjct: 61  WFLSGATNIKYLQENGVRIWNEWADKNGDLGPIYGVQWRNWQNVRGESIDQIMQVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  ++ MALPPCH  FQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NTPDSRRIIVSAWNVGELENMALPPCHAFFQFYVALGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+FI + GD H+Y+NH +Q ++QL+R+P+TL  + IN     + 
Sbjct: 181 YALLTHMMAQQCDLEVGDFIWSGGDCHIYSNHTKQVEIQLARTPKTLATLKINNKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF   +Y   A I A V++
Sbjct: 241 DYNFEDFEFINYVFDAYIKATVAI 264


>gi|332300790|ref|YP_004442711.1| Thymidylate synthase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177853|gb|AEE13543.1| Thymidylate synthase [Porphyromonas asaccharolytica DSM 20707]
          Length = 265

 Score =  328 bits (841), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 157/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G++R DRTG GT   FG+QM FDL+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119
           WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G  IDQ+   +  +
Sbjct: 61  WFLKGDTNLQYLHDNKVSIWDEWADETGDLGPIYGAQWRHWFDPHTGQTIDQMQQALDLI 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWNVA +  M L PCHCL Q+YV   KL  QLYQRS D+FLG+PFNIA
Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGNKLDLQLYQRSADIFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M +      L
Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F Y+DFTL  Y P+  I A VS+
Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSI 265


>gi|228469308|ref|ZP_04054334.1| thymidylate synthase [Porphyromonas uenonis 60-3]
 gi|228309207|gb|EEK17809.1| thymidylate synthase [Porphyromonas uenonis 60-3]
          Length = 265

 Score =  328 bits (841), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 158/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G++R DRTG GT   FG+QM FDL+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119
           WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G  IDQ+   +  +
Sbjct: 61  WFLKGDTNLQYLHDNKVSIWDEWADEAGDLGPIYGAQWRHWFDPHTGQTIDQMQQALDLI 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWNVA +  M L PCHCL Q+YV   KL  QLYQRS D+FLG+PFNIA
Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGDKLDLQLYQRSADIFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M +      L
Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F Y+DFTL  Y P+  I A VSV
Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSV 265


>gi|94676836|ref|YP_588974.1| thymidylate synthase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|122988104|sp|Q1LSU0|TYSY_BAUCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|94219986|gb|ABF14145.1| thymidylate synthase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 264

 Score =  328 bits (841), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+R V   G  + DRT  GT S FG+QMRF+LS GFPL+TTK+ H +S+++ELL
Sbjct: 1   MKQYLELMRLVRTQGISKVDRTNTGTLSIFGHQMRFNLSHGFPLITTKRCHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL +H V+IWDEW ++ G+LGPIYG QWR+W   DG+ IDQ+S ++  L+
Sbjct: 61  WFLNGDTNINYLRKHHVTIWDEWINEKGDLGPIYGRQWRAWGTADGSYIDQLSDVMLQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +MAL PCH LFQFYV NG LSCQLYQRS D+FLG+PFNI+S
Sbjct: 121 HNPDSRRIIVSAWNVGEIKQMALAPCHVLFQFYVANGVLSCQLYQRSCDMFLGLPFNISS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q GEFI T GD+HLY NH +Q DLQL R+PR LPQ+II      L 
Sbjct: 181 YALLIHMVAQQCDLQLGEFIWTGGDIHLYRNHLKQTDLQLKRNPRPLPQLIIKRRPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L  Y+PH AI A+V+V
Sbjct: 241 QYQFDDFYLSGYDPHPAIKAQVAV 264


>gi|225023101|ref|ZP_03712293.1| hypothetical protein CORMATOL_03149 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944324|gb|EEG25533.1| hypothetical protein CORMATOL_03149 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 272

 Score =  328 bits (840), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 155/261 (59%), Positives = 192/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S F  Q+RFDL++ FPL+TTK+VH+ SVV ELLWFL
Sbjct: 13  YEDLLRKILAEGTHKNDRTGTGTTSLFAQQLRFDLAESFPLITTKQVHFHSVVGELLWFL 72

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            G SNV++L  +G+ IW+EWAD  GELGP+YGVQWRSWP  DG  +DQIS+ +  LRADP
Sbjct: 73  SGSSNVAWLQENGIRIWNEWADDQGELGPVYGVQWRSWPTPDGRYVDQISASLAMLRADP 132

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  + KMALPPCH LFQ YV + +LSCQ+YQRS D+FLG+PFNIASYSL
Sbjct: 133 DSRRNIVSAWNVGELPKMALPPCHLLFQLYVADNRLSCQVYQRSADMFLGVPFNIASYSL 192

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           L  MLA   G + GE I T GD H+Y+NH EQ  LQL+R PR  PQ+ +     DL S+ 
Sbjct: 193 LAHMLAQQAGLRVGELIWTGGDCHIYDNHREQVALQLTRDPRPYPQLELR-KAADLFSYT 251

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + D  +R Y+PH  I A+VSV
Sbjct: 252 FSDVVVRGYDPHPRIPARVSV 272


>gi|315646630|ref|ZP_07899747.1| thymidylate synthase [Paenibacillus vortex V453]
 gi|315277956|gb|EFU41277.1| thymidylate synthase [Paenibacillus vortex V453]
          Length = 264

 Score =  328 bits (840), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 150/264 (56%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+ ++  G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL
Sbjct: 1   MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLMTTKRIHLKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N+ YL  +GV IWDEWAD++G+LGP+YG QWR+W   DG  IDQI+++++S++
Sbjct: 61  WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGQHIDQIANVIESIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA I+ M LPPCH +FQFYV  GKLSC L  RS D FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVAEIENMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + GEFI + GDVH+Y+NH EQ   QL R P  LP++II      + 
Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHMEQVKTQLEREPYELPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF    Y+ H  I A V+V
Sbjct: 241 DYTFDDFEFEGYQYHPTIKATVAV 264


>gi|262374153|ref|ZP_06067430.1| thymidylate synthase [Acinetobacter junii SH205]
 gi|262311164|gb|EEY92251.1| thymidylate synthase [Acinetobacter junii SH205]
          Length = 280

 Score =  328 bits (840), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 161/280 (57%), Positives = 198/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRTYLDLLQHILDNGGDKDDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA  +         GELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGASQNEDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             N  DQI  +V  ++ +P SRR IVS WN     K+ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 QQNGFDQIKWLVNEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVHDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLDVGDFVWTGGDTHLYANHFEQAKLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP+I D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPDIKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|268315914|ref|YP_003289633.1| thymidylate synthase [Rhodothermus marinus DSM 4252]
 gi|262333448|gb|ACY47245.1| thymidylate synthase [Rhodothermus marinus DSM 4252]
          Length = 283

 Score =  327 bits (839), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 160/283 (56%), Positives = 196/283 (69%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY + LR++++ G+ R DRTG GT S FGYQMRFDL +GFPL+TTKK+H KSVVHELL
Sbjct: 1   MRQYHEFLRYILERGTRREDRTGTGTISVFGYQMRFDLQEGFPLVTTKKIHIKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YLH HGV+IWDEWA ++GELGPIYG QWR W   DG  IDQI+ +V+S+R
Sbjct: 61  WFLRGDTNLRYLHEHGVTIWDEWATEEGELGPIYGKQWRRWLAPDGREIDQIAEVVRSIR 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYV------DNGKLSC 161
             P+SRRH+VSAWNVA +              +MAL PCH LFQFYV      +  +LSC
Sbjct: 121 ERPWSRRHVVSAWNVADLPDERLSPQENVRRGRMALAPCHVLFQFYVAERPEWERPRLSC 180

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D FLG+PFNIASYSLLT M+A       GEFI T GD H+Y NH EQ +  LS
Sbjct: 181 QLYQRSADAFLGVPFNIASYSLLTHMIAQQTDLDVGEFIWTGGDCHIYLNHLEQVEELLS 240

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P  LP+++I      +  +RYEDF   +Y  H  I A ++V
Sbjct: 241 REPYPLPKLVIKRRPPSIFDYRYEDFEFVNYRHHPPIKAPIAV 283


>gi|89901757|ref|YP_524228.1| thymidylate synthase [Rhodoferax ferrireducens T118]
 gi|122996836|sp|Q21U56|TYSY_RHOFD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|89346494|gb|ABD70697.1| thymidylate synthase [Rhodoferax ferrireducens T118]
          Length = 277

 Score =  327 bits (839), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 160/269 (59%), Positives = 190/269 (70%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D LRHV   G  + DRTG GT S FGYQMRFDL++GFPL+TTKKV  K++V ELLWF
Sbjct: 9   QYEDFLRHVSTHGVFKADRTGTGTTSVFGYQMRFDLNEGFPLVTTKKVFLKAIVLELLWF 68

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L   G +IWDEWA  DG+LGP+YGVQWRSWP  DG  IDQI+  +++L+ +
Sbjct: 69  LRGDSNVKWLQERGCTIWDEWARPDGDLGPVYGVQWRSWPTPDGGHIDQIAEAIKTLKTN 128

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA +DKMAL PCH  FQFYV         GKLSCQLYQRS D+FLG+P
Sbjct: 129 PDSRRIIVSAWNVAELDKMALMPCHAFFQFYVAPAQTPGGKGKLSCQLYQRSADIFLGVP 188

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A       G+FI T GD H+Y+NH EQ  LQLSR+P   P + I   
Sbjct: 189 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHVYSNHAEQVALQLSRTPFAYPTLSIKRK 248

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  + YEDF +  YE H AI A V+V
Sbjct: 249 PASIFDYAYEDFEVLGYECHPAIKAPVAV 277


>gi|78484917|ref|YP_390842.1| thymidylate synthase [Thiomicrospira crunogena XCL-2]
 gi|123769134|sp|Q31I55|TYSY_THICR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|78363203|gb|ABB41168.1| thymidylate synthase [Thiomicrospira crunogena XCL-2]
          Length = 277

 Score =  327 bits (839), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 154/277 (55%), Positives = 194/277 (70%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+H+ + G  + DRTG GTRS FGYQMRF+L +GFPL+TTKK+H KS+V+ELL
Sbjct: 1   MKQYLDLLKHITETGVAKGDRTGTGTRSVFGYQMRFNLEEGFPLVTTKKLHLKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  HGV IWDEWA + G+LGPIYG QW +W   +G+ I+QI  ++Q+L+
Sbjct: 61  WFLNGDTNNQYLKEHGVRIWDEWATETGDLGPIYGRQWVAWEKPNGDTINQIEEVIQTLK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN A +              +MAL  CH  FQFYV NGKLSCQLYQRS
Sbjct: 121 KNPNSRRMLVSAWNPADLPDESMSPQENVKQGRMALATCHAFFQFYVANGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASY+LLT M+A     + GEF+ T GDVHLYNN  EQA+LQ+SR+P  L
Sbjct: 181 ADTFLGVPFNIASYALLTHMIAQQTDLEVGEFVWTGGDVHLYNNTLEQAELQMSRTPYAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I      +  + ++DF +  YE H  I A VSV
Sbjct: 241 PKLKIKRKPPSIFDYEFDDFEIEGYESHPHIKAVVSV 277


>gi|296135862|ref|YP_003643104.1| thymidylate synthase [Thiomonas intermedia K12]
 gi|295795984|gb|ADG30774.1| thymidylate synthase [Thiomonas intermedia K12]
          Length = 279

 Score =  327 bits (839), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 159/272 (58%), Positives = 193/272 (70%), Gaps = 11/272 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+RHV   G D+ DRTG GTRS FG+QMRFDLS GFPL+TTK+VH+KS+ +ELLWFL
Sbjct: 8   YEDLMRHVFTHGQDKTDRTGTGTRSVFGHQMRFDLSAGFPLITTKRVHFKSIAYELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           RG+SNV +L  HGV+IWDEWA +DGELGP+YGVQWRSWP    D     IDQIS +++ L
Sbjct: 68  RGESNVRWLQEHGVTIWDEWAREDGELGPVYGVQWRSWPAPTADDPHRSIDQISEVLRQL 127

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFL 172
           R  P SRR IVSAWNV  I +MALPPCH  FQFYV       + G+LSCQLYQRS D+FL
Sbjct: 128 RTQPDSRRIIVSAWNVGQIAEMALPPCHAFFQFYVAPPRQPGEPGRLSCQLYQRSADIFL 187

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G+PFNIASY+LLT+M+A       G+F+ T GD HLY+NHF Q   QLSR+P   P +  
Sbjct: 188 GVPFNIASYALLTLMIAQQTDLLPGDFVWTGGDCHLYSNHFAQVQEQLSRAPYPYPTLEF 247

Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                 L  + ++DF L  Y+ H AI A V+V
Sbjct: 248 ARKPESLFDYTFDDFVLSHYQHHPAIKAPVAV 279


>gi|262369944|ref|ZP_06063271.1| thymidylate synthase [Acinetobacter johnsonii SH046]
 gi|262314983|gb|EEY96023.1| thymidylate synthase [Acinetobacter johnsonii SH046]
          Length = 280

 Score =  327 bits (838), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 199/280 (71%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL
Sbjct: 1   MKTYLDLLQHILDHGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPD-------Y 104
           WFL+GD+NV YL  + VSIWDEW+  +         GELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLQDNKVSIWDEWSTAEQTARFGRPEGELGPVYGHQWRNFGATKKADGLY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI+ +V  ++ +P SRR IVS WN     ++ALPPCH LFQF+V NGKLSCQLY
Sbjct: 121 EKDGFDQIAWLVNEIKTNPNSRRLIVSGWNPQEAGQVALPPCHTLFQFFVHNGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP + D+  F++ED  +  YE H  I A V+V
Sbjct: 241 LGLCQLKLNPAVKDIFDFKFEDIEIVGYESHPGIKAPVAV 280


>gi|302556750|ref|ZP_07309092.1| thymidylate synthase [Streptomyces griseoflavus Tu4000]
 gi|302474368|gb|EFL37461.1| thymidylate synthase [Streptomyces griseoflavus Tu4000]
          Length = 265

 Score =  327 bits (838), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 156/262 (59%), Positives = 193/262 (73%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL+ V+  G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH KS+V+ELLWF
Sbjct: 5   QYEDLLQLVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLKSIVYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI  ++ +LR D
Sbjct: 65  LRGDSNVRWLQEHGVTIWDEWADDNGDLGPVYGAQWRSWPTPDGRHIDQIEEVLGTLRRD 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV+ + KMAL PCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRMIVSAWNVSELSKMALAPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A   G + G+FI T GD H+Y+NH  Q   QLSR+P   P + +      L  +
Sbjct: 185 LLTHMVAQQSGLEPGDFIWTGGDCHIYDNHVAQVTEQLSRTPFAFPALELR-RADSLFDY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            Y D  +  Y  H AI A V+V
Sbjct: 244 SYSDVQVAGYRHHPAIKAPVAV 265


>gi|332666783|ref|YP_004449571.1| Thymidylate synthase [Haliscomenobacter hydrossis DSM 1100]
 gi|332335597|gb|AEE52698.1| Thymidylate synthase [Haliscomenobacter hydrossis DSM 1100]
          Length = 301

 Score =  327 bits (838), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 165/306 (53%), Positives = 205/306 (66%), Gaps = 47/306 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  LL+H++K G  + DRTG GT S FGYQ+RFDL+ GFPL+TTKKVH KS++HELL
Sbjct: 1   MQQYHTLLQHILKNGVRKHDRTGTGTISVFGYQVRFDLNDGFPLITTKKVHIKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------------ADK 86
           WFL+GD+N+ YL R+GV IW+EW                                   D 
Sbjct: 61  WFLKGDTNIQYLVRNGVGIWNEWPFQFWLQNENPDLAQTKYSPAWKDKLSEFVERIKTDD 120

Query: 87  D-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN---VALI 138
           D     G LGP+YG QWR   +++G  +DQI  +V  +R  P SRR +VSAWN   + ++
Sbjct: 121 DFATQWGNLGPVYGQQWR---NFEG--VDQIVQVVNDIRRSPDSRRLLVSAWNPKEIPVM 175

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            K  LPPCH LFQFYV  GKLSCQLYQRS DVFLG+PFNIASY+LLT+M+A V G Q GE
Sbjct: 176 VKSGLPPCHALFQFYVAEGKLSCQLYQRSADVFLGVPFNIASYALLTLMMAQVCGLQPGE 235

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           FIH+ GD HLY NH EQA +QLSR PR+LPQM +NP + ++  F+YEDFTL  Y+P+ AI
Sbjct: 236 FIHSFGDAHLYLNHLEQAQIQLSRQPRSLPQMKLNPAVREIFDFQYEDFTLSDYDPYPAI 295

Query: 259 LAKVSV 264
            A+VSV
Sbjct: 296 KAEVSV 301


>gi|323356765|ref|YP_004223161.1| thymidylate synthase [Microbacterium testaceum StLB037]
 gi|323273136|dbj|BAJ73281.1| thymidylate synthase [Microbacterium testaceum StLB037]
          Length = 269

 Score =  327 bits (838), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 153/261 (58%), Positives = 191/261 (73%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G  + DRTG GT S FG Q+RFDL++GFPL+TTK+VH KS+V+ELLWFL
Sbjct: 9   YEDLLRDVLETGVHKSDRTGTGTTSVFGRQIRFDLAEGFPLITTKRVHLKSIVYELLWFL 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  +GV+IWDEWAD +GELGP+YGVQWRSWP  DG  IDQIS +++ +R DP
Sbjct: 69  RGESNVGWLKDNGVTIWDEWADGEGELGPVYGVQWRSWPTADGGTIDQISQVIEQIRRDP 128

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWN A I  MAL PCH LFQFYV  GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 129 DSRRLIVSAWNPADIPDMALAPCHALFQFYVAEGKLSCQLYQRSADMFLGVPFNIASYAL 188

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT+M+A   G + G+F+ T GD H+Y+NH EQ   QL+R P   P +        +  + 
Sbjct: 189 LTLMVAQQTGLEPGDFVWTGGDCHVYDNHREQVQEQLTREPYPYPTLRFARTPESIFDYT 248

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y+D  +  Y+ H AI   V+V
Sbjct: 249 YDDILVEDYQHHPAIRGAVAV 269


>gi|168335169|ref|ZP_02693275.1| thymidylate synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 259

 Score =  327 bits (838), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 146/264 (55%), Positives = 196/264 (74%), Gaps = 5/264 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+++++  G  + DRTGVGT STFGYQMRF+L++GFPL+T K+ ++K + HELL
Sbjct: 1   MKQYKDLVQYIMDNGVYKEDRTGVGTISTFGYQMRFNLAEGFPLVTLKRTYFKGIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL    V IWDEWAD++G+LGP+YG QWRS+       +DQI+ +++ ++
Sbjct: 61  WFLSGXTNIKYLVDKNVHIWDEWADENGDLGPVYGAQWRSFSG-----VDQIAHVIEEIK 115

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IV+AWNV  I+KMALPPCH  FQFYV  GKLSCQ+YQRS D FLG+PFNIAS
Sbjct: 116 SNPDSRRLIVTAWNVPEIEKMALPPCHMFFQFYVAEGKLSCQMYQRSADTFLGVPFNIAS 175

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLL  M+A+V   + G+F+HT+GD H+Y NH +Q  L L R P++LP++ I   +  + 
Sbjct: 176 YSLLVHMIAAVTDLEVGDFVHTIGDAHIYTNHLQQVKLMLKREPKSLPKIRILRKVDSIF 235

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y PH AI A+V+V
Sbjct: 236 DFRYEDFELLDYNPHKAIKAEVAV 259


>gi|332531037|ref|ZP_08406956.1| thymidylate synthase [Hylemonella gracilis ATCC 19624]
 gi|332039518|gb|EGI75925.1| thymidylate synthase [Hylemonella gracilis ATCC 19624]
          Length = 283

 Score =  327 bits (837), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 158/269 (58%), Positives = 196/269 (72%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT S FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF
Sbjct: 15  QYEDFMRHVHTHGVAKSDRTGTGTTSVFGHQMRFDLNEGFPLVTTKKVHLKSIILELLWF 74

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G SN ++L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS ++++L+++
Sbjct: 75  LTGSSNNNWLKDRGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKSN 134

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + KMAL PCH  FQFYV       + GKLSCQLYQRS D+FLG+P
Sbjct: 135 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGVP 194

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A   G   G+FI T GD H+Y+NH EQ +LQLSR P   P + I   
Sbjct: 195 FNIASYALLTHMVAQQCGLGVGDFIWTGGDCHIYSNHHEQVELQLSRQPYPYPVLHIKRQ 254

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  ++YEDF +R Y+ H AI A V+V
Sbjct: 255 PDSIFDYQYEDFEVRDYQCHPAIKAPVAV 283


>gi|237785076|ref|YP_002905781.1| Thymidylate synthase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237757988|gb|ACR17238.1| Thymidylate synthase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 275

 Score =  327 bits (837), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 159/261 (60%), Positives = 189/261 (72%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++K G+ R DRTG GT S FG QMRFDLS+ FPLLTTKKV  + +  EL WFL
Sbjct: 16  YEDLLREILKDGNHRDDRTGTGTTSLFGKQMRFDLSEYFPLLTTKKVFMRGLSEELFWFL 75

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SN+  L    V IWDEWAD+DG LGPIYGVQWRSWP  DG  IDQIS  +  ++ +P
Sbjct: 76  RGESNIHSLLEKNVHIWDEWADEDGNLGPIYGVQWRSWPTPDGGTIDQISQALDMIKNNP 135

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNVA +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 136 TSRRIIVSAWNVADVPSMALPPCHLLFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 195

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   GEFI T GD H+Y+NH +Q DLQLSR PR  P + +     DL S+ 
Sbjct: 196 LTHMMAQQAGLDVGEFIWTGGDCHIYDNHRDQIDLQLSRDPRPYPTLSLT-KAADLFSYT 254

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  + +Y PH AI A V+V
Sbjct: 255 WDDVDILNYNPHPAIKAPVAV 275


>gi|296118294|ref|ZP_06836875.1| thymidylate synthase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968852|gb|EFG82096.1| thymidylate synthase [Corynebacterium ammoniagenes DSM 20306]
          Length = 270

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 150/261 (57%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL+ V++ G+++ DRTG GTRS FG+Q+R+DL++ FPLLTTKKV++  V+ ELLWFL
Sbjct: 11  YEELLKKVLETGAEKSDRTGTGTRSLFGHQLRYDLNESFPLLTTKKVYFHGVIGELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNVS+L  + + IW+EWAD +GELGP+YGVQWRSWP  DG  IDQI +++  L+ +P
Sbjct: 71  RGESNVSWLQENKIRIWNEWADANGELGPVYGVQWRSWPTPDGQHIDQIETVMDQLKNNP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +DKMAL PCH LFQ YV  GKLS Q+YQRS D+FLG+PFNIASY+ 
Sbjct: 131 DSRRILVSAWNVSELDKMALMPCHLLFQLYVAEGKLSMQVYQRSADMFLGVPFNIASYAA 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GE I T GDVH+YNNH EQ   QL+R+PR  PQ+ +N     +  + 
Sbjct: 191 LTHMFAQQAGLEVGELIWTGGDVHIYNNHIEQVKEQLARTPRAYPQLKLN-KAKSIFDYN 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++DF L  Y+PH  I A VSV
Sbjct: 250 FDDFELEGYDPHPTIKAPVSV 270


>gi|146329360|ref|YP_001209479.1| thymidylate synthase [Dichelobacter nodosus VCS1703A]
 gi|166231696|sp|A5EVG5|TYSY_DICNV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|146232830|gb|ABQ13808.1| thymidylate synthase [Dichelobacter nodosus VCS1703A]
          Length = 258

 Score =  325 bits (834), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 156/250 (62%), Positives = 193/250 (77%), Gaps = 6/250 (2%)

Query: 15  GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74
           G D+ DRTGVGTRS FGYQMRFDL+ GFPLLTTKK+H+KS+V+ELLWFL G++N++YL++
Sbjct: 15  GVDKSDRTGVGTRSLFGYQMRFDLAAGFPLLTTKKMHFKSIVYELLWFLSGNTNIAYLNQ 74

Query: 75  HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           +GVSIWDEWADK+G+LGPIYG QWR+W   D     QI  ++ SL+ +P SRR +VS+WN
Sbjct: 75  NGVSIWDEWADKNGDLGPIYGKQWRNWAGRD-----QIHQVLTSLKTNPDSRRMLVSSWN 129

Query: 135 VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
           VA +++MALPPCH LFQFYV NG+LSCQLYQRS DVFLG+PFNIASY+LLTMM+A     
Sbjct: 130 VAQLEEMALPPCHVLFQFYVANGRLSCQLYQRSADVFLGVPFNIASYALLTMMMAQQADL 189

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
           + G+F+ T GDVHLY NHF QA  QL R P  LP+M I      +  + +EDF L  Y  
Sbjct: 190 ELGDFVWTGGDVHLYRNHFAQAQEQLKRQPYPLPKMHIK-RAKSIDDYVFEDFLLVDYRC 248

Query: 255 HAAILAKVSV 264
           HAAI A V+V
Sbjct: 249 HAAIKAPVAV 258


>gi|312795490|ref|YP_004028412.1| Thymidylate synthase [Burkholderia rhizoxinica HKI 454]
 gi|312167265|emb|CBW74268.1| Thymidylate synthase (EC 2.1.1.45) [Burkholderia rhizoxinica HKI
           454]
          Length = 278

 Score =  325 bits (833), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 152/274 (55%), Positives = 196/274 (71%), Gaps = 13/274 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL +L+ +++ G+ + DRTG GTRS FG   R DLS GFPLLTTKK+H +S++HELLWFL
Sbjct: 5   YLSILKDLLERGTLKSDRTGTGTRSLFGVSYRHDLSTGFPLLTTKKLHVRSILHELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+N+ YLH +GV+IWDEWA  DGELGP+YG QWRSW + DG   DQ+ +++ SLR  P
Sbjct: 65  RGDTNIRYLHENGVTIWDEWATPDGELGPVYGAQWRSWRNPDGTRTDQVQALLDSLRTKP 124

Query: 124 YSRRHIVSAWNV-------------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
            SRRHI++AWNV             AL  +M+LPPCH L+QFY+  GKLSC L QRSGD 
Sbjct: 125 DSRRHILNAWNVSFLPDESKSPEQNALEGRMSLPPCHILYQFYIAEGKLSCMLTQRSGDW 184

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
           FLGIP+N AS + LT M+A  +G Q GE +H++GD HLY NH EQA LQL+R+PR LP++
Sbjct: 185 FLGIPYNCASVAFLTHMIAQQLGLQPGEIVHSIGDAHLYLNHVEQARLQLTRTPRPLPRL 244

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           II      L  +R+EDF +  Y+PH  I A ++V
Sbjct: 245 IIKREPDTLFDYRFEDFEIAGYDPHPHIAAPIAV 278


>gi|294340056|emb|CAZ88424.1| thymidylate synthase (TS) (TSase) [Thiomonas sp. 3As]
          Length = 279

 Score =  325 bits (833), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 159/272 (58%), Positives = 192/272 (70%), Gaps = 11/272 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+RHV   G D+ DRTG GTRS FG+QMRFDLS GFPL+TTK+VH+KS+ +ELLWFL
Sbjct: 8   YEDLMRHVFTHGQDKTDRTGTGTRSVFGHQMRFDLSAGFPLITTKRVHFKSIAYELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           RG+SNV +L  HGV+IWDEWA +DGELGP+YGVQWRSWP    D     IDQIS +++ L
Sbjct: 68  RGESNVRWLQEHGVTIWDEWAREDGELGPVYGVQWRSWPAPTADDPHRSIDQISEVLRQL 127

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFL 172
           R  P SRR IVSAWNV  I +MALPPCH  FQFYV         G+LSCQLYQRS D+FL
Sbjct: 128 RTQPDSRRIIVSAWNVGQIAEMALPPCHAFFQFYVAPPRQPGGPGRLSCQLYQRSADIFL 187

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G+PFNIASY+LLT+M+A       G+F+ T GD HLY+NHF Q   QLSR+P   P +  
Sbjct: 188 GVPFNIASYALLTLMIAQQTDLLPGDFVWTGGDCHLYSNHFAQVQEQLSRAPYPYPTLEF 247

Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                 L  + ++DF L  Y+ H AI A V+V
Sbjct: 248 ARKPESLFDYTFDDFVLSHYQHHPAIKAPVAV 279


>gi|25027475|ref|NP_737529.1| thymidylate synthase [Corynebacterium efficiens YS-314]
 gi|259507119|ref|ZP_05750019.1| thymidylate synthase [Corynebacterium efficiens YS-314]
 gi|29337062|sp|Q8FR47|TYSY_COREF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|23492757|dbj|BAC17729.1| putative thymidylate synthase [Corynebacterium efficiens YS-314]
 gi|259165397|gb|EEW49951.1| thymidylate synthase [Corynebacterium efficiens YS-314]
          Length = 267

 Score =  325 bits (833), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 155/261 (59%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +   G+ + DRTG GT S FG Q+R++L +GFPLLTTKKVH+ SVV ELLWFL
Sbjct: 8   YEDLLRTIRDEGAHKDDRTGTGTTSLFGQQIRYNLQEGFPLLTTKKVHFHSVVGELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  + + IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQIS  ++ L+ +P
Sbjct: 68  RGDSNVRWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISRALEMLKNNP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 128 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAL 187

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A     + GEFI T GD H+Y+NH EQ D QLSR+ R  P + +N     L  + 
Sbjct: 188 LTHMFAQQADLEVGEFIWTGGDCHIYDNHTEQVDEQLSRAARPYPTLELN-KAASLFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  + +Y+PH  I  KV+V
Sbjct: 247 FEDIAVSNYDPHPLIRGKVAV 267


>gi|167752654|ref|ZP_02424781.1| hypothetical protein ALIPUT_00910 [Alistipes putredinis DSM 17216]
 gi|167659723|gb|EDS03853.1| hypothetical protein ALIPUT_00910 [Alistipes putredinis DSM 17216]
          Length = 299

 Score =  325 bits (832), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 163/298 (54%), Positives = 195/298 (65%), Gaps = 35/298 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR + K G  + DRTG GTRS FGYQMRFDL  GFPLLTTKKV  K V++ELL
Sbjct: 1   MQQYLDLLRKIRKDGIVKSDRTGTGTRSIFGYQMRFDLEAGFPLLTTKKVFLKGVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK---------------------------------- 86
           WFL+GD+N+ YL  HGV IWD  A +                                  
Sbjct: 61  WFLQGDTNIKYLLDHGVHIWDNDAYRYYNELCVRHGVLPLEREAFLDAVRREEPSSIDGY 120

Query: 87  -DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
             G+L  +YG QWRSWP  DG  IDQI  ++  ++  P SRR +VSAWNVA +D MALPP
Sbjct: 121 RPGDLNHVYGYQWRSWPRPDGGCIDQIRQVIDQIKHSPDSRRMLVSAWNVAEVDDMALPP 180

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           CH LFQFYV  G+LSCQLYQRS D FLG+PFNIASY+LLTMM+A   G + G+F+HTLGD
Sbjct: 181 CHVLFQFYVAGGRLSCQLYQRSADTFLGVPFNIASYALLTMMIAQECGLRPGDFVHTLGD 240

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            HLY NH +Q   QLSR+PR LP + +NP +  +  FRYEDFTL +Y+P  AI A +S
Sbjct: 241 AHLYLNHADQVAEQLSRTPRPLPTLRLNPAVRSVFDFRYEDFTLENYDPWPAIKAPMS 298


>gi|111019241|ref|YP_702213.1| thymidylate synthase [Rhodococcus jostii RHA1]
 gi|123046371|sp|Q0SEI1|TYSY_RHOSR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|110818771|gb|ABG94055.1| thymidylate synthase [Rhodococcus jostii RHA1]
          Length = 266

 Score =  325 bits (832), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 154/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GT+S FG+QMR++L+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 7   YEDLLRLVMDTGTPKADRTGTGTKSVFGHQMRWNLADGFPLITTKKVHLKSIVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +GV+IWDEWAD DGELGP+YGVQWRSWP   G  IDQI+  +++L+++P
Sbjct: 67  RGDSNVKWLQDNGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITQTIETLKSNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGDIPQMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G + G+FI T GD H+Y+NH +Q   QLSR P   P + +N     +  + 
Sbjct: 187 LTHMVAQQAGLEPGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLNKR-ESIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y  H AI A V+V
Sbjct: 246 FEDVEIVDYRHHPAIKAPVAV 266


>gi|226361376|ref|YP_002779154.1| thymidylate synthase [Rhodococcus opacus B4]
 gi|226239861|dbj|BAH50209.1| thymidylate synthase [Rhodococcus opacus B4]
          Length = 267

 Score =  324 bits (831), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 156/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR++L+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 8   YEDLLRLVMDTGTPKADRTGTGTRSVFGHQMRWNLADGFPLVTTKKVHLKSIVYELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +GV+IWDEWAD DGELGP+YGVQWRSWP   G  IDQIS  +++L+++P
Sbjct: 68  RGDSNVKWLQDNGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQISQTIETLKSNP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 128 DSRRIIVSAWNVGDIPQMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 187

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G + G+FI T GD H+Y+NH +Q   QLSR P   P + +N     +  + 
Sbjct: 188 LTHMVAQQAGLEPGDFIWTGGDCHIYDNHVDQVAEQLSREPLPYPTLKLN-RRDSIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y  H AI A V+V
Sbjct: 247 FEDVEIVDYRHHPAIKAPVAV 267


>gi|219883095|ref|YP_002477705.1| thymidylate synthase [Arthrobacter chlorophenolicus A6]
 gi|219862101|gb|ACL42442.1| thymidylate synthase [Arthrobacter chlorophenolicus A6]
          Length = 276

 Score =  324 bits (831), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 156/269 (57%), Positives = 192/269 (71%), Gaps = 8/269 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  V   G+ + DRTG GT S FG Q+RFDLS+GFPL+ TKKVHW SV +ELLWFL
Sbjct: 8   YEDLLAEVAALGAAKGDRTGTGTTSVFGRQIRFDLSEGFPLIWTKKVHWPSVANELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV +L   GV IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+S+R +P
Sbjct: 68  RGETNVRWLQERGVKIWDEWADENGDLGPVYGSQWRSWPTPDGGQIDQIANVVESIRNNP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFN 177
            SRRHIV+AWN A +D MALPPCH LFQFYV        GKLSCQLYQRS D+FLG+PFN
Sbjct: 128 NSRRHIVTAWNPAEVDNMALPPCHALFQFYVAPGTDGGPGKLSCQLYQRSADMFLGVPFN 187

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPN 235
           IASY+LLT M+A   G   GEFI T GDVH+Y+NH +Q   QL R    R  P++  N  
Sbjct: 188 IASYALLTHMVAQQTGLDVGEFIWTGGDVHIYDNHTDQVAEQLGRLDEVRAYPELKFNRV 247

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  + +EDF +  Y+PH  I A V+V
Sbjct: 248 PDSIFDYTFEDFEVVGYDPHPLIKAPVAV 276


>gi|227548298|ref|ZP_03978347.1| thymidylate synthase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079616|gb|EEI17579.1| thymidylate synthase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 266

 Score =  324 bits (831), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 155/261 (59%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ GS + DRTG GT S FG Q+R+DLS+ FPLLTTKKV++K VV ELLWFL
Sbjct: 7   YEDLLRDILENGSPKGDRTGTGTLSVFGRQLRYDLSQSFPLLTTKKVYFKGVVGELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  + + IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQIS  ++ LR DP
Sbjct: 67  RGESNVRWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISESLRLLREDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNV+ +DKMAL PCH LFQ YV +G+LS Q+YQRS D+FLG+PFNIASYSL
Sbjct: 127 ESRRNLVSAWNVSELDKMALMPCHLLFQLYVADGRLSMQVYQRSADMFLGVPFNIASYSL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT+M A   G   GE I T GD H+YNNH EQ   QLSR PR  PQ+ +      L  + 
Sbjct: 187 LTLMFAQQAGLTVGELIWTGGDCHIYNNHIEQVKEQLSREPRPYPQLELR-KAPSLFEYS 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y+PH  I A+V+V
Sbjct: 246 FDDIKVVGYDPHPTITAEVAV 266


>gi|172057750|ref|YP_001814210.1| thymidylate synthase [Exiguobacterium sibiricum 255-15]
 gi|171990271|gb|ACB61193.1| Thymidylate synthase [Exiguobacterium sibiricum 255-15]
          Length = 264

 Score =  324 bits (831), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 141/264 (53%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L + ++  G  + DRTG GT S FG+QMRF L  GFP++TTKK+H KS++HEL+
Sbjct: 1   MKQYHQLCQEILTNGVKKEDRTGTGTISIFGHQMRFSLQDGFPMVTTKKLHMKSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ G++N+SYL  +GV IW+EWAD++G LGP+YG QWRS+P  DG  +DQ++ +++ ++
Sbjct: 61  WFISGETNISYLQENGVRIWNEWADENGNLGPVYGAQWRSFPKPDGTTVDQLADVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   +++MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 VNPDSRRLIVSAWNPGQLEEMALPPCHLLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + G+F+HTLGD H+Y+NH +Q +LQLSR+P+ LP +     +  + 
Sbjct: 181 YALLTHMIAHVCKLEVGDFVHTLGDSHIYSNHLDQVNLQLSRNPKPLPTIRFAREVERIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++D  +  Y+P   I   V+V
Sbjct: 241 DFTFDDIIIEGYDPDPHIKGVVAV 264


>gi|323253293|gb|EGA37122.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
          Length = 252

 Score =  324 bits (831), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 145/247 (58%), Positives = 187/247 (75%)

Query: 18  RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGV 77
             D TG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V
Sbjct: 6   ENDGTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNV 65

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ DP SRR IVSAWNV  
Sbjct: 66  TIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGE 125

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LL  M+A       G
Sbjct: 126 LDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVG 185

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           +F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L  +R++DF +  Y+PH  
Sbjct: 186 DFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPG 245

Query: 258 ILAKVSV 264
           I A V++
Sbjct: 246 IKAPVAI 252


>gi|261406249|ref|YP_003242490.1| thymidylate synthase [Paenibacillus sp. Y412MC10]
 gi|261282712|gb|ACX64683.1| thymidylate synthase [Paenibacillus sp. Y412MC10]
          Length = 264

 Score =  324 bits (831), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 150/264 (56%), Positives = 192/264 (72%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+ ++  G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL
Sbjct: 1   MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLMTTKRIHLKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N+ YL  +GV IWDEWAD++G+LGP+YG QWR+W   DG  IDQI+ ++ S++
Sbjct: 61  WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGRHIDQIAGVIDSIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA ID M LPPCH +FQFYV  GKLSC L  RS D FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVAEIDNMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GEFI + GDVH+Y+NH EQ   QL R P  LP+++I      + 
Sbjct: 181 YALLTHMVAQQCDLEPGEFIWSGGDVHIYSNHMEQVRTQLEREPYALPKLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF    Y+ H  I A V+V
Sbjct: 241 DYTFEDFEFEGYQYHPTIKATVAV 264


>gi|317508366|ref|ZP_07966039.1| thymidylate synthase [Segniliparus rugosus ATCC BAA-974]
 gi|316253323|gb|EFV12720.1| thymidylate synthase [Segniliparus rugosus ATCC BAA-974]
          Length = 270

 Score =  324 bits (831), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 156/263 (59%), Positives = 196/263 (74%), Gaps = 5/263 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G +R DRTG GT S FG+Q+R+DL+KGFPL+TTKKVH KS+V+ELLWFL
Sbjct: 11  YEDLLRLVLEQGVERSDRTGTGTLSVFGHQLRYDLAKGFPLITTKKVHLKSIVYELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+NV +L   GV+IWDEWA +DG LGP+YG QWRSWP  DG V+DQI+  +  LR DP
Sbjct: 71  RGDTNVRWLQERGVTIWDEWAREDGGLGPVYGAQWRSWPAPDGAVVDQIAQALHLLRTDP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
           +SRR +VSAWNV  + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 131 HSRRILVSAWNVGELPKMALAPCHILFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII--NPNIVDLLS 241
           LT M+A   G + G+F+ T GD HLY NH +QA  QL+R P   P++ +   P++ +   
Sbjct: 191 LTHMMAQQAGLEAGDFVWTGGDCHLYLNHVDQAREQLARDPFPYPRLELAERPSVFE--- 247

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
             YED  +  Y+ H AI A V+V
Sbjct: 248 HEYEDVRILGYQSHPAIKAPVAV 270


>gi|319941408|ref|ZP_08015736.1| thymidylate synthase [Sutterella wadsworthensis 3_1_45B]
 gi|319805028|gb|EFW01858.1| thymidylate synthase [Sutterella wadsworthensis 3_1_45B]
          Length = 266

 Score =  324 bits (830), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 151/263 (57%), Positives = 197/263 (74%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QY  LL+ + + G+ + DRTG GTRS FG QMRF L+ GFPL+TTKK+H +S+++ELLW
Sbjct: 4   NQYETLLKDIYERGAHKSDRTGTGTRSLFGCQMRFPLADGFPLVTTKKLHLRSIIYELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL G +N+ YLH H V+IWDEWAD++GELGP+YG QWR+WP  DG  IDQIS +++ ++ 
Sbjct: 64  FLSGSTNIKYLHDHKVTIWDEWADENGELGPVYGRQWRAWPTSDGRTIDQISEVLERIKK 123

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR +V+AWN A +DKMALPPCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIASY
Sbjct: 124 NPDSRRLLVTAWNPAEVDKMALPPCHCLFQFYVADGRLSCQLYQRSCDMFLGVPFNIASY 183

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A     + G+F+ T GD H+Y+NH EQ  LQLSR PR  P+++I      L  
Sbjct: 184 ALLTHMVAQQCDLEPGDFVWTGGDCHIYDNHLEQTALQLSREPRPYPKLVIKRRPASLFE 243

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + YEDF    Y+P   I A V+V
Sbjct: 244 YEYEDFEFEGYDPWPGIKAPVAV 266


>gi|329921994|ref|ZP_08277801.1| thymidylate synthase [Paenibacillus sp. HGF5]
 gi|328942454|gb|EGG38717.1| thymidylate synthase [Paenibacillus sp. HGF5]
          Length = 264

 Score =  324 bits (830), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 150/264 (56%), Positives = 192/264 (72%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+ ++  G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL
Sbjct: 1   MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLVTTKRIHLKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N+ YL  +GV IWDEWAD++G+LGP+YG QWR+W   DG  IDQI+ ++ S++
Sbjct: 61  WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGRHIDQIAGVIDSIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA ID M LPPCH +FQFYV  GKLSC L  RS D FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVAEIDNMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GEFI + GDVH+Y+NH EQ   QL R P  LP+++I      + 
Sbjct: 181 YALLTHMVAQQCDLEPGEFIWSGGDVHIYSNHMEQVRTQLEREPYALPKLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF    Y+ H  I A V+V
Sbjct: 241 DYTFEDFEFEGYQYHPTIKATVAV 264


>gi|332670062|ref|YP_004453070.1| thymidylate synthase [Cellulomonas fimi ATCC 484]
 gi|332339100|gb|AEE45683.1| thymidylate synthase [Cellulomonas fimi ATCC 484]
          Length = 281

 Score =  323 bits (828), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 152/261 (58%), Positives = 191/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+Q+RFDLS+GFPL+TTK+VH +SVV ELLWFL
Sbjct: 22  YEDLLRLVMATGTPKSDRTGTGTRSVFGHQLRFDLSQGFPLVTTKRVHLRSVVQELLWFL 81

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L   GV+IWDEWAD DGELGP+YGVQWRSWP  DG  +DQI+ +V++LR DP
Sbjct: 82  RGESNVRWLREQGVTIWDEWADADGELGPVYGVQWRSWPTPDGGAVDQITQLVENLRRDP 141

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRH+VSAWNVA I  MAL PCH  FQ YV +G+LS Q+YQRS D+FLG+PFN+ASY+L
Sbjct: 142 DSRRHLVSAWNVAAIPDMALAPCHAFFQAYVADGRLSLQVYQRSADLFLGVPFNLASYAL 201

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA     + G+ + T GD H+Y+NH +Q   QLSR P   P + +      +L +R
Sbjct: 202 LTHMLAQQTDLEVGDLVWTGGDCHVYDNHVDQVREQLSREPYAPPTLRLR-RAPSILEYR 260

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y  H  I A V+V
Sbjct: 261 FEDVEVVDYRHHPTIKAPVAV 281


>gi|262202109|ref|YP_003273317.1| thymidylate synthase [Gordonia bronchialis DSM 43247]
 gi|262085456|gb|ACY21424.1| thymidylate synthase [Gordonia bronchialis DSM 43247]
          Length = 270

 Score =  323 bits (828), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 153/261 (58%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  V++ G+ + DRTG GTRS FG+Q+R+DL+ GFPL+TTKKVH KS+++ELLWFL
Sbjct: 11  YEDLLALVLETGTPKDDRTGTGTRSLFGHQLRYDLAAGFPLITTKKVHLKSIIYELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV+IWDEWAD +GELGP+YGVQWRSWP   G  IDQI+  ++ LR DP
Sbjct: 71  RGDSNVRWLQERGVTIWDEWADDNGELGPVYGVQWRSWPTPSGEHIDQIAGALRLLRTDP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 131 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   GEF+ T GD H+Y+NH +Q  LQLSR P   P++ +  +   +  + 
Sbjct: 191 LTHMMAQQAGLGVGEFVWTGGDCHIYDNHVDQVRLQLSRDPYPYPKLELR-HRDSIFGYE 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y  H  I A V+V
Sbjct: 250 FDDIAVVDYRSHPPIKAPVAV 270


>gi|227501444|ref|ZP_03931493.1| thymidylate synthase [Corynebacterium accolens ATCC 49725]
 gi|227077469|gb|EEI15432.1| thymidylate synthase [Corynebacterium accolens ATCC 49725]
          Length = 275

 Score =  323 bits (828), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 152/261 (58%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++  VV ELLWFL
Sbjct: 16  YEDLLRRVLESGTAKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHGVVGELLWFL 75

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  + V IW+EWAD++G+LGP+YGVQWRSWP  DG+ IDQI   + +L+ +P
Sbjct: 76  RGDSNVKFLQDNNVRIWNEWADENGDLGPVYGVQWRSWPTPDGSHIDQIQQALDTLKNNP 135

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNV+ +D+MAL PCH LFQ YV N  LS Q+YQRS D+FLG+PFNIASY+ 
Sbjct: 136 DSRRNLVSAWNVSELDQMALMPCHLLFQLYVANDTLSLQVYQRSADMFLGVPFNIASYAA 195

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + G+ I T GD H+YNNH EQ   QLSR PR  PQ+ +N    DL S+ 
Sbjct: 196 LTHMFAQQAGLKVGDLIWTGGDCHIYNNHIEQVQEQLSREPREYPQLKLN-KAKDLFSYD 254

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + DF ++ Y+PH AI A+VSV
Sbjct: 255 FADFEVQGYDPHPAIKAQVSV 275


>gi|257070033|ref|YP_003156288.1| thymidylate synthase [Brachybacterium faecium DSM 4810]
 gi|256560851|gb|ACU86698.1| thymidylate synthase [Brachybacterium faecium DSM 4810]
          Length = 267

 Score =  323 bits (828), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 153/261 (58%), Positives = 192/261 (73%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G  + DRTG GTRS FG Q+RFDLS+GFPL+TTK+VH +S++ ELLWFL
Sbjct: 7   YEDLLREVMETGHAKGDRTGTGTRSLFGKQIRFDLSQGFPLITTKRVHTRSIILELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+NV +L   GVSIWDEWAD++G+LGP+YG QWRSWP  DG VIDQI+ +V+ +R +P
Sbjct: 67  RGDTNVRWLQERGVSIWDEWADENGDLGPVYGAQWRSWPTPDGGVIDQITDVVEQIRTNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWN A I +MAL PCH LFQF V +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRLIVSAWNPADIPQMALAPCHALFQFEVHDGKLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A     + G+F+ T GD H+Y+NH EQ   QLSR P   P++ I      +L + 
Sbjct: 187 LTHMVAQQTDLEVGDFVWTGGDCHIYDNHHEQVQRQLSREPFPSPRLRIARRPESILDYE 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            ED  +  Y+ H  I A V+V
Sbjct: 247 LEDIEILDYQHHKGIKAPVAV 267


>gi|325124433|gb|ADY83956.1| thyA; thymidylate synthase (Ts) (TSase) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 280

 Score =  323 bits (827), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + VSIWDEWA  +          ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR I+S WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I DL  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEIKDLFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|326384524|ref|ZP_08206204.1| thymidylate synthase [Gordonia neofelifaecis NRRL B-59395]
 gi|326196869|gb|EGD54063.1| thymidylate synthase [Gordonia neofelifaecis NRRL B-59395]
          Length = 268

 Score =  323 bits (827), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 152/261 (58%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG+QMRFDLS+GFP++TTKKVH KS+++ELLWFL
Sbjct: 9   YEDLLRLVLETGTPKADRTGTGTRSVFGHQMRFDLSEGFPVITTKKVHLKSIIYELLWFL 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV+IWDEWA  +GELGP+YGVQWR+WP   G  +DQI+  +++LR+DP
Sbjct: 69  RGDSNVRWLQDRGVTIWDEWASPEGELGPVYGVQWRNWPTPSGEHVDQIAVALETLRSDP 128

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 129 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVAGGKLSCQLYQRSADLFLGVPFNIASYAL 188

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G + G+F+ T GD H+Y+NH EQ   QLSR     P + +      +  + 
Sbjct: 189 LTHMMAQQAGLEVGDFVWTGGDCHIYDNHVEQVREQLSRDALPYPTLRLR-KADSIFDYD 247

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y  H AI A V+V
Sbjct: 248 FDDVEVVDYHSHPAIKAPVAV 268


>gi|299771659|ref|YP_003733685.1| thymidylate synthase [Acinetobacter sp. DR1]
 gi|298701747|gb|ADI92312.1| thymidylate synthase [Acinetobacter sp. DR1]
          Length = 280

 Score =  323 bits (827), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + VSIWDEWA  +          ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR I+S WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I DL  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEIKDLFDFKFEDVEIVGYESHPAIKAPVAV 280


>gi|219681791|ref|YP_002468177.1| thymidylate synthase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471493|ref|ZP_05635492.1| thymidylate synthase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
 gi|254790232|sp|B8D9L8|TYSY_BUCA5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219624634|gb|ACL30789.1| thymidylate synthase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 264

 Score =  322 bits (826), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 146/264 (55%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H  S+++ELL
Sbjct: 1   MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W   +G+ IDQI +++  L+
Sbjct: 61  WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  IDKM LPPCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YS+L  M+A     + G+F+ T GDVHLYNNH E A  Q+ R PRTLP++ I      L 
Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y P+ AI  K+S+
Sbjct: 241 QYCFEDFKIIGYHPYPAIKGKISI 264


>gi|311087331|gb|ADP67411.1| thymidylate synthase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
          Length = 264

 Score =  322 bits (825), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 145/264 (54%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H  S+++ELL
Sbjct: 1   MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W   +G+ IDQI +++  L+
Sbjct: 61  WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTLEGHEIDQIKNVLIQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  IDKM LPPCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YS+L  M+A     + G+F+ T GDVHLYNNH E A  Q+ R PRTLP++ I      L 
Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y P+ AI  ++S+
Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264


>gi|293610254|ref|ZP_06692555.1| thymidylate synthase [Acinetobacter sp. SH024]
 gi|292827486|gb|EFF85850.1| thymidylate synthase [Acinetobacter sp. SH024]
          Length = 280

 Score =  322 bits (825), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + VSIWDEWA  +          ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQARLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP + DL  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEVKDLFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|260556178|ref|ZP_05828397.1| thymidylate synthase [Acinetobacter baumannii ATCC 19606]
 gi|193076274|gb|ABO10913.2| thymidylate synthase [Acinetobacter baumannii ATCC 17978]
 gi|260410233|gb|EEX03532.1| thymidylate synthase [Acinetobacter baumannii ATCC 19606]
          Length = 280

 Score =  322 bits (825), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA  +          ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLDVGDFVWTGGDTHLYANHFEQAKLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP++ D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|163735032|ref|ZP_02142469.1| thymidylate synthase [Roseobacter litoralis Och 149]
 gi|161391814|gb|EDQ16146.1| thymidylate synthase [Roseobacter litoralis Och 149]
          Length = 277

 Score =  322 bits (825), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 147/277 (53%), Positives = 204/277 (73%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D LR +++FG +  DRTG GT S FG QMR+ LS GFPL+TTKK+H +S+ HELL
Sbjct: 1   MQQYHDALRTILEFGEESTDRTGTGTTSYFGMQMRYRLSDGFPLVTTKKLHLRSIFHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-------------PDYDGN 107
           WFL GD+N+ YL  +GV IWDEWAD++G+LGP+YG QWR++             P + G 
Sbjct: 61  WFLSGDTNIRYLQENGVKIWDEWADENGDLGPVYGHQWRAFSAGAQTGDVKDDEPLHIGR 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQ+++++ ++++ P SRR IVSAWN A + +MALPPCH L+Q  V NG++  QLYQRS
Sbjct: 121 GVDQVANLIDTIKSSPDSRRLIVSAWNPADVPRMALPPCHALWQVRVLNGRMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASYS+L +MLA V G++ G+F+HTLGD H+Y+NH +Q +LQL+R+P+ L
Sbjct: 181 ADMFLGVPFNIASYSMLLVMLAHVTGYEPGDFVHTLGDAHIYSNHMDQVNLQLTRTPKPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ IN ++  +  FRYEDF +  Y+P  AI A V+V
Sbjct: 241 PKLRINRDVSSIFDFRYEDFEVIGYDPDPAIRAPVAV 277


>gi|256832262|ref|YP_003160989.1| thymidylate synthase [Jonesia denitrificans DSM 20603]
 gi|256685793|gb|ACV08686.1| thymidylate synthase [Jonesia denitrificans DSM 20603]
          Length = 266

 Score =  322 bits (824), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 154/261 (59%), Positives = 190/261 (72%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL   ++ G+ + DRTG GT S FG+QMRFDL +GFPL+TTKKVH KSVV ELLWFL
Sbjct: 7   YEDLLALTLQHGTPKNDRTGTGTTSIFGHQMRFDLREGFPLITTKKVHLKSVVGELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  HG+ IW+EWAD  GELGP+YGVQWRSWP  DG+ IDQ+S +V +LR DP
Sbjct: 67  RGESNVQWLQDHGIRIWNEWADARGELGPVYGVQWRSWPTPDGHHIDQLSQVVDTLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ + KMAL PCH  FQFYV +G LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRMLVSAWNVSELHKMALAPCHAFFQFYVADGTLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A       GEFI T GD H+Y+NH  Q + QL+R  R  P++ +N     L  + 
Sbjct: 187 LTHMVAQQTDLAVGEFIWTGGDCHIYDNHRSQVNEQLTRDVRPFPRLELN-RADSLFDYC 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  YEPH  I A V+V
Sbjct: 246 FDDVVVHDYEPHPTIRASVAV 266


>gi|15617039|ref|NP_240252.1| thymidylate synthase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11387178|sp|P57515|TYSY_BUCAI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|25285999|pir||B84981 thymidylate synthase (EC 2.1.1.45) [imported] - Buchnera sp.
           (strain APS)
 gi|10039104|dbj|BAB13138.1| thymidylate synthase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 264

 Score =  322 bits (824), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 146/264 (55%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H  S+++ELL
Sbjct: 1   MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+SYL+ + +SIW+ WA++ G++GPIYG QWR+W   +G+ IDQI +++  L+
Sbjct: 61  WFLKGDTNISYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  IDKM LPPCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YS+L  M+A     + G+F+ T GDVHLYNNH E A  Q+ R PRTLP++ I      L 
Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y P+ AI  ++S+
Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264


>gi|237748057|ref|ZP_04578537.1| thymidylate synthetase [Oxalobacter formigenes OXCC13]
 gi|229379419|gb|EEO29510.1| thymidylate synthetase [Oxalobacter formigenes OXCC13]
          Length = 277

 Score =  322 bits (824), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 148/277 (53%), Positives = 199/277 (71%), Gaps = 18/277 (6%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LL+ ++  G D+ DRTG GTR+ FG  MR DL  G PLLTTK++H +S++HELLWF
Sbjct: 4   QYLNLLQEILDCGIDKGDRTGTGTRAVFGRMMRHDLKNGLPLLTTKRLHIRSIIHELLWF 63

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+G +NV YL+ + V+IWDEWA ++GELGPIYG QWR+W   DG +IDQ++ ++ S+R +
Sbjct: 64  LQGGTNVQYLNENKVTIWDEWATENGELGPIYGAQWRAWEGSDGRIIDQVAGVIDSIRTN 123

Query: 123 PYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           P SRRHI+SAWNVAL+              KMAL PCH ++QF V  G+LSC + QRSGD
Sbjct: 124 PDSRRHIISAWNVALLPSEKMSPQENVRAGKMALAPCHVMYQFQVAAGRLSCMMTQRSGD 183

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           +FLGIP+N AS + LT M+A     + GE IH++GD+HLY NHF+QA LQLSR PR LP 
Sbjct: 184 IFLGIPYNTASTAFLTHMIAQQCDLEPGEIIHSIGDLHLYTNHFDQAKLQLSREPRALPT 243

Query: 230 MIIN--PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + ++  P+I D   +R+EDF +  Y+PH AI A ++V
Sbjct: 244 LKLDKKPSIFD---YRFEDFEVIGYDPHPAIAAPIAV 277


>gi|239814670|ref|YP_002943580.1| thymidylate synthase [Variovorax paradoxus S110]
 gi|239801247|gb|ACS18314.1| thymidylate synthase [Variovorax paradoxus S110]
          Length = 289

 Score =  322 bits (824), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 154/269 (57%), Positives = 192/269 (71%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH +S++ ELLWF
Sbjct: 21  QYEDFMRHVDTHGVHKSDRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLRSIIQELLWF 80

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G SN ++L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS ++++L+ +
Sbjct: 81  LTGSSNNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKTN 140

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + KMAL PCH  FQFYV       + GKLSCQLYQRS D+FLG+P
Sbjct: 141 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPPQAPGERGKLSCQLYQRSADIFLGVP 200

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A       G+FI T GD H+Y+NH EQ  LQLSR+P   P + I   
Sbjct: 201 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVALQLSRTPYPYPTLHIKRK 260

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  ++YEDF +  Y  H  I A V+V
Sbjct: 261 PASIFDYQYEDFEVLDYRHHDPIKAPVAV 289


>gi|184156788|ref|YP_001845127.1| thymidylate synthase [Acinetobacter baumannii ACICU]
 gi|239500809|ref|ZP_04660119.1| thymidylate synthase [Acinetobacter baumannii AB900]
 gi|332873201|ref|ZP_08441158.1| thymidylate synthase [Acinetobacter baumannii 6014059]
 gi|183208382|gb|ACC55780.1| Thymidylate synthase [Acinetobacter baumannii ACICU]
 gi|322506680|gb|ADX02134.1| thyA [Acinetobacter baumannii 1656-2]
 gi|323516555|gb|ADX90936.1| thymidylate synthase [Acinetobacter baumannii TCDC-AB0715]
 gi|332738713|gb|EGJ69583.1| thymidylate synthase [Acinetobacter baumannii 6014059]
          Length = 280

 Score =  321 bits (823), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA  +          ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP++ D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|169797290|ref|YP_001715083.1| thymidylate synthase [Acinetobacter baumannii AYE]
 gi|213155900|ref|YP_002317945.1| thymidylate synthase [Acinetobacter baumannii AB0057]
 gi|215484727|ref|YP_002326962.1| thymidylate synthase [Acinetobacter baumannii AB307-0294]
 gi|301346589|ref|ZP_07227330.1| thymidylate synthase [Acinetobacter baumannii AB056]
 gi|301511036|ref|ZP_07236273.1| thymidylate synthase [Acinetobacter baumannii AB058]
 gi|301595085|ref|ZP_07240093.1| thymidylate synthase [Acinetobacter baumannii AB059]
 gi|332851207|ref|ZP_08433280.1| thymidylate synthase [Acinetobacter baumannii 6013150]
 gi|332866061|ref|ZP_08436789.1| thymidylate synthase [Acinetobacter baumannii 6013113]
 gi|226713163|sp|B7H0P4|TYSY_ACIB3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713164|sp|B7I4U0|TYSY_ACIB5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|169150217|emb|CAM88113.1| thymidylate synthase (TS) (TSase) [Acinetobacter baumannii AYE]
 gi|213055060|gb|ACJ39962.1| thymidylate synthase [Acinetobacter baumannii AB0057]
 gi|213986584|gb|ACJ56883.1| thymidylate synthase [Acinetobacter baumannii AB307-0294]
 gi|332730087|gb|EGJ61414.1| thymidylate synthase [Acinetobacter baumannii 6013150]
 gi|332734807|gb|EGJ65900.1| thymidylate synthase [Acinetobacter baumannii 6013113]
          Length = 280

 Score =  321 bits (823), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 156/280 (55%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA  +          ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP + D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|262280883|ref|ZP_06058666.1| thymidylate synthase [Acinetobacter calcoaceticus RUH2202]
 gi|262257783|gb|EEY76518.1| thymidylate synthase [Acinetobacter calcoaceticus RUH2202]
          Length = 280

 Score =  321 bits (823), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 157/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + VSIWDEWA  +          ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR I+S WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYVNHFEQAQLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP + DL  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEVKDLFDFKFEDVEIVGYESHPAIKAPVAV 280


>gi|169634445|ref|YP_001708181.1| thymidylate synthase [Acinetobacter baumannii SDF]
 gi|169153237|emb|CAP02337.1| thymidylate synthase (TS) (TSase) [Acinetobacter baumannii]
          Length = 280

 Score =  321 bits (823), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA  +          ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD+HLY NHFEQA LQL R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDIHLYANHFEQAKLQLMREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP++ D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|261338193|ref|ZP_05966077.1| thymidylate synthase [Bifidobacterium gallicum DSM 20093]
 gi|270276839|gb|EFA22693.1| thymidylate synthase [Bifidobacterium gallicum DSM 20093]
          Length = 289

 Score =  321 bits (823), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 153/265 (57%), Positives = 195/265 (73%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S FG QMRFDL++GFPLLTTK+V  K + +ELLWFL
Sbjct: 26  YEDLLRKILMEGNLKSDRTGTGTISLFGQQMRFDLTQGFPLLTTKRVFLKGITYELLWFL 85

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  H V IWDEWAD+ G+LGP+YGVQWRSWP    D     IDQIS++++ +
Sbjct: 86  KGSSNVRWLQEHNVHIWDEWADEHGDLGPVYGVQWRSWPAPTADDPNRTIDQISNVLELI 145

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R +P SRR +VSAWN A +++MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIA
Sbjct: 146 RTNPDSRRMVVSAWNPAEVEQMALPPCHALFQFYVANGKLSCQLYQRSCDMFLGVPFNIA 205

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYS+LTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   PQ+ I      L
Sbjct: 206 SYSMLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEIR-KADSL 264

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + ++DFT+++Y+ H  I A ++V
Sbjct: 265 FEYDWDDFTIQNYQYHPTIKAPIAV 289


>gi|308048436|ref|YP_003912002.1| thymidylate synthase [Ferrimonas balearica DSM 9799]
 gi|307630626|gb|ADN74928.1| thymidylate synthase [Ferrimonas balearica DSM 9799]
          Length = 277

 Score =  321 bits (822), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 155/277 (55%), Positives = 188/277 (67%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTG GTRS FG+QMRFDL +GFP+LTTKK+HWKS+VHE+L
Sbjct: 1   MKAYLDLLNHVMTNGVDRDDRTGTGTRSVFGHQMRFDLGEGFPMLTTKKLHWKSIVHEML 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW+EWA ++GELGP+YGVQWR W   DG  IDQI+ +++ L+
Sbjct: 61  WFLSGDTNVRYLQENGVRIWNEWATEEGELGPVYGVQWRHWKTPDGQEIDQIAKVIEDLK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWN A +              KMAL PCH   QFYV NGKLSC L QRS
Sbjct: 121 VRPNSRRIIVSAWNPADLPDETCSPAANAEAGKMALAPCHAFIQFYVANGKLSCMLTQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+ FNI SY+LLT M+A   G + GEFI + GDVH+Y NHFEQ   QL R P  L
Sbjct: 181 VDCFLGLAFNIPSYALLTHMVAQQTGLEVGEFIWSGGDVHIYKNHFEQVATQLQRQPGAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I      +  +R+EDF L  Y+    I A V++
Sbjct: 241 PKLEILRRPDSIFDYRFEDFALHDYQAQPHIPAPVAI 277


>gi|121610113|ref|YP_997920.1| thymidylate synthase [Verminephrobacter eiseniae EF01-2]
 gi|121554753|gb|ABM58902.1| thymidylate synthase [Verminephrobacter eiseniae EF01-2]
          Length = 298

 Score =  321 bits (822), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 157/268 (58%), Positives = 188/268 (70%), Gaps = 7/268 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+RHV + G  + DRTG GT+S FG+QMRFDL  GFPL+TTK+VH KS++ ELLWFL
Sbjct: 31  YEDLMRHVFRHGVHKSDRTGTGTKSLFGHQMRFDLRGGFPLVTTKRVHLKSIIEELLWFL 90

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            G  N  +L + GVSIWDEWA  DG+LGP+YGVQWRSWP  DG  IDQI S++ +L+ +P
Sbjct: 91  AGSGNNRWLQQRGVSIWDEWARADGDLGPVYGVQWRSWPRPDGGHIDQIGSVIATLKTNP 150

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIPF 176
            SRR IVSAWNVA +DKMAL PCH LFQFYV         G LSCQLYQRS D+FLG+PF
Sbjct: 151 DSRRIIVSAWNVAELDKMALQPCHILFQFYVAPAQTPGGRGTLSCQLYQRSADIFLGLPF 210

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           NIASY+LLT M+A       GEFI T GD H+Y+NH  Q   QL+RSP   PQ+ I    
Sbjct: 211 NIASYALLTHMVAQQCELDVGEFIWTGGDCHIYDNHHAQVQTQLARSPYPYPQLRIRRRP 270

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             +  +RYEDF +  Y  H AI A V+V
Sbjct: 271 DSIFDYRYEDFEVLDYRCHPAIKAPVAV 298


>gi|219682346|ref|YP_002468730.1| thymidylate synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|254790233|sp|B8D7X0|TYSY_BUCAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219622079|gb|ACL30235.1| thymidylate synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|311086743|gb|ADP66824.1| thymidylate synthase [Buchnera aphidicola str. TLW03 (Acyrthosiphon
           pisum)]
 gi|311087836|gb|ADP67915.1| thymidylate synthase [Buchnera aphidicola str. JF98 (Acyrthosiphon
           pisum)]
          Length = 264

 Score =  321 bits (822), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 145/264 (54%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H  S+++ELL
Sbjct: 1   MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W   +G+ IDQI +++  L+
Sbjct: 61  WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  IDKM LPPCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YS+L  M+A     + G+F+ T GDVHLYNNH E A  Q+ R PRTLP++ I      L 
Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y P+ AI  ++S+
Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264


>gi|259418355|ref|ZP_05742273.1| thymidylate synthase [Silicibacter sp. TrichCH4B]
 gi|259345750|gb|EEW57594.1| thymidylate synthase [Silicibacter sp. TrichCH4B]
          Length = 277

 Score =  321 bits (822), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 150/277 (54%), Positives = 194/277 (70%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D L+H++  G +  DRTG GT S FG Q R+DL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYHDALQHILDHGVETTDRTGTGTLSCFGMQQRYDLADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P              Y   
Sbjct: 61  WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGYQWRKFPRLELAEGTLGDEPLYRAG 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQIS +V+ +R  P SRR IV+AWN A +  MALPPCH L+Q  V  GK+  QLYQRS
Sbjct: 121 TVDQISDLVKMIRNSPDSRRLIVTAWNPADVPDMALPPCHSLWQVRVLGGKMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LL  MLA V G++ G F+HT+GD H+Y+NH EQ  LQLSR+P+ L
Sbjct: 181 ADMFLGVPFNIASYALLLQMLAHVTGYEIGTFVHTMGDAHIYSNHMEQVKLQLSRTPKQL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PQ+ I  N+  L  F+YEDF +  Y+P   I A V+V
Sbjct: 241 PQIRIARNVTSLFDFKYEDFEVIGYDPDPTIKAPVAV 277


>gi|300781716|ref|ZP_07091570.1| thymidylate synthase [Corynebacterium genitalium ATCC 33030]
 gi|300533423|gb|EFK54484.1| thymidylate synthase [Corynebacterium genitalium ATCC 33030]
          Length = 274

 Score =  321 bits (822), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 152/261 (58%), Positives = 189/261 (72%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G  + DRTG GT S FG Q+R+DLS  FPLLTTKKV++K VV ELLWFL
Sbjct: 15  YEDLLREILDTGVAKEDRTGTGTVSVFGKQLRYDLSDSFPLLTTKKVYFKGVVGELLWFL 74

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +GDSNV +L  +G+ IW+EWA+ +GELGP+YGVQWRSWP  DG  IDQI + +  L+ DP
Sbjct: 75  KGDSNVKWLQDNGIRIWNEWANDNGELGPVYGVQWRSWPTPDGQHIDQIQNALDLLKQDP 134

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNV+ +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFNIASYSL
Sbjct: 135 ESRRNVVSAWNVSELDKMALMPCHLLFQLYVADGKLSMQVYQRSADMFLGVPFNIASYSL 194

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GE I T GD H+YN+H EQ   QLSR PR  PQ+ +      +  + 
Sbjct: 195 LTHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSREPRPYPQLEL-AKAESIFDYG 253

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y+PH  I AKVSV
Sbjct: 254 FDDIAVTGYDPHPTIAAKVSV 274


>gi|262274909|ref|ZP_06052720.1| thymidylate synthase [Grimontia hollisae CIP 101886]
 gi|262221472|gb|EEY72786.1| thymidylate synthase [Grimontia hollisae CIP 101886]
          Length = 279

 Score =  320 bits (821), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/279 (53%), Positives = 192/279 (68%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G+DR DRTGVGTRS FG QMRFDLS+GFPLLTTKK++ ++++HELL
Sbjct: 1   MKQYLDLMQDILDNGTDRGDRTGVGTRSVFGRQMRFDLSEGFPLLTTKKLYTRAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  + V+IWDEWA + G+LGP+YG QWRSW   DG+ +DQI+ +++ ++
Sbjct: 61  WFLNGDTNVKYLQDNKVTIWDEWATETGDLGPVYGAQWRSWACPDGSTVDQIAELIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRRHI++AWN A +              KMAL PCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 TKPNSRRHIITAWNPADLPDESISPQANAEQGKMALAPCHCLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225
            D FLG+PFNIASY+L T M+A       GEF+HT GDVHLY+NH     +  QL R P 
Sbjct: 181 ADYFLGVPFNIASYALFTHMIAQQCDLDVGEFVHTFGDVHLYHNHLTDDIVYEQLKREPG 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             P + I      +  ++ EDF +  YE    I A +++
Sbjct: 241 KRPTLKIKRKPASIFDYKLEDFEIEGYEAQPTIKAPIAI 279


>gi|229196462|ref|ZP_04323208.1| Thymidylate synthase [Bacillus cereus m1293]
 gi|228587032|gb|EEK45104.1| Thymidylate synthase [Bacillus cereus m1293]
          Length = 318

 Score =  320 bits (821), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/313 (48%), Positives = 199/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESEEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++I+NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLILNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|306835604|ref|ZP_07468615.1| thymidylate synthase [Corynebacterium accolens ATCC 49726]
 gi|304568537|gb|EFM44091.1| thymidylate synthase [Corynebacterium accolens ATCC 49726]
          Length = 275

 Score =  320 bits (820), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 150/261 (57%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV+++ V+ ELLWFL
Sbjct: 16  YEDLLRRVLEEGTAKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFRGVIGELLWFL 75

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  + V IW+EWAD++G+LGP+YGVQWRSWP  DG+ IDQI   + +L+ +P
Sbjct: 76  RGDSNVKFLQDNNVHIWNEWADENGDLGPVYGVQWRSWPTPDGSHIDQIQQALDTLKNNP 135

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNV+ +D+MAL PCH LFQ YV N  LS Q+YQRS D+FLG+PFNIASY+ 
Sbjct: 136 DSRRNLVSAWNVSELDQMALMPCHLLFQLYVANDTLSLQVYQRSADMFLGVPFNIASYAA 195

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + G+ I T GD H+YNNH EQ   QL R PR  PQ+ +N    DL S+ 
Sbjct: 196 LTHMFAQQAGLKVGDLIWTGGDCHIYNNHVEQVQEQLFREPREYPQLKLN-KAKDLFSYD 254

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + DF ++ Y+PH AI A+VSV
Sbjct: 255 FADFEVQGYDPHPAIKAQVSV 275


>gi|163745997|ref|ZP_02153356.1| Thymidylate synthase [Oceanibulbus indolifex HEL-45]
 gi|161380742|gb|EDQ05152.1| Thymidylate synthase [Oceanibulbus indolifex HEL-45]
          Length = 277

 Score =  320 bits (820), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/277 (54%), Positives = 198/277 (71%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D LR V+  G    DRTG GT S FG Q R+ ++ GFPL+TTKK+H KS+VHELL
Sbjct: 1   MKQYHDALREVLDQGVTSTDRTGTGTISHFGMQQRYRMADGFPLVTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP-------DYDGNV----- 108
           WFL GD+N++YL ++GVSIW+EWAD+DG+LGP+YG QWR +P         DG V     
Sbjct: 61  WFLAGDTNIAYLRQNGVSIWNEWADEDGDLGPVYGHQWRRFPMVGEPMPQPDGTVLHRAG 120

Query: 109 -IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQI+ +V ++RA P SRR IVSAWN   +D+MALPPCH L+Q  +  GKL  QLYQRS
Sbjct: 121 QVDQIAKLVDAIRATPDSRRLIVSAWNPGEVDQMALPPCHTLWQVRIAGGKLHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LL  MLA V G+  G+F+H++GD H+Y+NH EQ   QL+R+P+ L
Sbjct: 181 ADMFLGVPFNIASYALLLEMLAHVTGYAPGDFVHSMGDAHIYSNHVEQVQTQLARTPKAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ IN  +  +  FRYEDFT   Y+P+ AI A V+V
Sbjct: 241 PKLRINRKVSSIFDFRYEDFTFDGYDPNPAIKAPVAV 277


>gi|260220887|emb|CBA28903.1| Thymidylate synthase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 296

 Score =  320 bits (820), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/270 (56%), Positives = 195/270 (72%), Gaps = 8/270 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH +S++ ELLWF
Sbjct: 27  QYEDFMRHVHTTGVFKSDRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLRSIIQELLWF 86

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           L G SN ++L   GV+IWDEWA+ + G+LGP+YGVQWRSWP  DG  IDQI+ ++++L++
Sbjct: 87  LTGSSNNNWLKERGVTIWDEWANPETGDLGPVYGVQWRSWPTPDGGHIDQIADVIKTLKS 146

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGI 174
           +P SRR IVSAWNVA + KMAL PCH  FQFYV         G+LSCQLYQRS D+FLG+
Sbjct: 147 NPDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPATEPGGKGRLSCQLYQRSADIFLGV 206

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT M+A       G+FI T GD H+Y+NH EQ +LQLSR+P   P + I  
Sbjct: 207 PFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHTEQVELQLSRAPMAYPTLNIKR 266

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               +  +++EDF +  YE H AI A V+V
Sbjct: 267 KPESIFDYQFEDFEVLGYECHPAIKAPVAV 296


>gi|288941276|ref|YP_003443516.1| thymidylate synthase [Allochromatium vinosum DSM 180]
 gi|288896648|gb|ADC62484.1| thymidylate synthase [Allochromatium vinosum DSM 180]
          Length = 279

 Score =  320 bits (820), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/279 (54%), Positives = 195/279 (69%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR V+  G D+ DRTGVGTR+ FG Q+RFDL+ GFPLLTTK+VH+KSVV ELL
Sbjct: 1   MQVYLDLLRDVVANGQDQADRTGVGTRAVFGRQVRFDLAAGFPLLTTKRVHFKSVVGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G ++  +L  HG+ IWDEWA +   LGPIYG QWR+WP  DG  IDQ++ +V ++R
Sbjct: 61  WFLSGSTDNGWLRAHGIRIWDEWATEHDALGPIYGAQWRAWPAPDGRAIDQLAELVATIR 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P+SRR +VSAWN A +              +MAL PCHCLFQF+V NG+LSCQLYQRS
Sbjct: 121 TRPHSRRLVVSAWNPADLPDETLSPQDNVRAGRMALAPCHCLFQFHVANGRLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF--EQADLQLSRSPR 225
            D+FLG+PFNIASY+LLT ++A     + GEFIHT GD+HLY NH   E    QL R+PR
Sbjct: 181 ADLFLGVPFNIASYALLTHLIAQQCDLEPGEFIHTFGDLHLYRNHLTSEIVHAQLGRAPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP++++      L  + +ED  L+ Y+PH AI A ++V
Sbjct: 241 PLPRLVLKRRPETLFDYGFEDIELQGYDPHPAIRAPIAV 279


>gi|229190322|ref|ZP_04317323.1| Thymidylate synthase [Bacillus cereus ATCC 10876]
 gi|228593106|gb|EEK50924.1| Thymidylate synthase [Bacillus cereus ATCC 10876]
          Length = 318

 Score =  320 bits (820), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWRSW    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRSWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|148244715|ref|YP_001219409.1| thymidylate synthase [Candidatus Vesicomyosocius okutanii HA]
 gi|166231742|sp|A5CWK3|TYSY_VESOH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|146326542|dbj|BAF61685.1| thymidylate synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 264

 Score =  320 bits (819), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/264 (56%), Positives = 190/264 (71%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L+ V   G  + DRT  GT S FGYQMRFDLSKGFPL+TTK VH  SVV+ELL
Sbjct: 1   MKQYLDFLKLVKNIGVYKTDRTNTGTTSMFGYQMRFDLSKGFPLVTTKHVHLPSVVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWR W +     IDQIS +V+ ++
Sbjct: 61  WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGTQWRHWKNIKDKSIDQISKVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  ++ MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NTPNSRRIIVSAWNVGELENMALPPCHVFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A     + G+FI + GD H+Y+NH++Q ++QLSR+P+ L  + I     ++ 
Sbjct: 181 YSLLTHMMAQQCDLEVGDFIWSGGDCHIYSNHYKQVEIQLSRTPKALATLKIKRKPENIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF   +Y   A I A V++
Sbjct: 241 DYSFEDFEFVNYIFDAPIKAPVAI 264


>gi|91787702|ref|YP_548654.1| thymidylate synthase [Polaromonas sp. JS666]
 gi|123165061|sp|Q12CI6|TYSY_POLSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91696927|gb|ABE43756.1| thymidylate synthase [Polaromonas sp. JS666]
          Length = 284

 Score =  320 bits (819), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/269 (57%), Positives = 192/269 (71%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH KS+V ELLWF
Sbjct: 16  QYEDFMRHVDAHGVFKADRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLKSIVQELLWF 75

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G S+ ++L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS ++++L+ +
Sbjct: 76  LTGSSDNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKTN 135

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + KMAL PCH  FQFYV         GKLSCQLYQRS D+FLG+P
Sbjct: 136 PDSRRIIVSAWNVADLSKMALMPCHAFFQFYVAPATEAGGKGKLSCQLYQRSADIFLGVP 195

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNI SY+LLT M+A       G+FI T GD H+Y+NH EQ  LQLSR+P   P + I   
Sbjct: 196 FNIGSYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVALQLSRAPFPYPTLHIKRK 255

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  ++++DF    Y+ HAAI A V+V
Sbjct: 256 PESIFDYQFDDFEFLDYQHHAAIKAPVAV 284


>gi|311086170|gb|ADP66252.1| thymidylate synthase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
          Length = 264

 Score =  320 bits (819), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 145/264 (54%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H  S+++ELL
Sbjct: 1   MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N +YL+ + +SIW+ WA++ G++GPIYG QWR+W   +G+ IDQI +++  L+
Sbjct: 61  WFLKGDTNTAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  IDKM LPPCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YS+L  M+A     + G+F+ T GDVHLYNNH E A  Q+ R PRTLP++ I      L 
Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y P+ AI  ++S+
Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264


>gi|254464749|ref|ZP_05078160.1| thymidylate synthase [Rhodobacterales bacterium Y4I]
 gi|206685657|gb|EDZ46139.1| thymidylate synthase [Rhodobacterales bacterium Y4I]
          Length = 277

 Score =  320 bits (819), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 150/277 (54%), Positives = 194/277 (70%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD LRH++  G    DRTG GT S FG Q R+ L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYLDQLRHILDNGVPSDDRTGTGTLSCFGMQARYSLADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P              Y   
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRRFPKLELAEGTTGDEPLYRAG 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQI+ +V+ +R  P SRR IVSAWN   +  MALPPCH L+Q  V  GK+  QLYQRS
Sbjct: 121 SVDQIADLVEMIRKSPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRVAGGKMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LL  MLA V G++ G+F+HT+GD H+Y+NH EQ  LQLSRSP+ L
Sbjct: 181 ADMFLGVPFNIASYALLLAMLAHVTGYEAGDFVHTMGDAHIYSNHVEQVRLQLSRSPKPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PQ+ I   +  +  F+YEDF + +Y+P  AI A V+V
Sbjct: 241 PQLRIKRQVSSIFDFKYEDFEILNYDPDPAIKAPVAV 277


>gi|110679164|ref|YP_682171.1| thymidylate synthase [Roseobacter denitrificans OCh 114]
 gi|123172620|sp|Q168V8|TYSY_ROSDO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|109455280|gb|ABG31485.1| thymidylate synthase [Roseobacter denitrificans OCh 114]
          Length = 277

 Score =  319 bits (818), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 149/277 (53%), Positives = 201/277 (72%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D LR +++ G +  DRTG GT S FG QMR+ LS GFPL+TTKK+H +S+ HELL
Sbjct: 1   MQQYHDALRTILECGEESTDRTGTGTISYFGMQMRYPLSDGFPLVTTKKLHLRSIFHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-------------PDYDGN 107
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR++             P Y G 
Sbjct: 61  WFLSGDTNIRYLQDNGVSIWDEWADENGDLGPVYGHQWRAFSALSPTEEVKDGEPLYLGR 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQ+++++  +++ P SRR IVSAWN A + +MALPPCH L+Q  V NG++  QLYQRS
Sbjct: 121 GVDQVTNLIDMIKSSPDSRRMIVSAWNPADVPRMALPPCHALWQVRVLNGRMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASYSLL +MLA V G++ G+F+HTLGD H+Y+NH +Q +LQL+R+P+ L
Sbjct: 181 ADMFLGVPFNIASYSLLLVMLAHVTGYEPGDFVHTLGDAHIYSNHMDQVNLQLTRTPKPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + IN  +  +  FRYEDF +  Y+P  AI A V+V
Sbjct: 241 PTLRINRQVSSIFDFRYEDFEVIGYDPDPAIRAPVAV 277


>gi|229167077|ref|ZP_04294821.1| Thymidylate synthase [Bacillus cereus AH621]
 gi|228616430|gb|EEK73511.1| Thymidylate synthase [Bacillus cereus AH621]
          Length = 318

 Score =  319 bits (818), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL +H  +IW+EWA K                                   
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKQYDEQME 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR+ P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRSFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229172934|ref|ZP_04300487.1| Thymidylate synthase [Bacillus cereus MM3]
 gi|228610557|gb|EEK67826.1| Thymidylate synthase [Bacillus cereus MM3]
          Length = 318

 Score =  319 bits (818), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 199/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKNWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDNDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A+ 
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIANE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQIEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|47570165|ref|ZP_00240821.1| thymidylate synthase [Bacillus cereus G9241]
 gi|47553184|gb|EAL11579.1| thymidylate synthase [Bacillus cereus G9241]
          Length = 318

 Score =  319 bits (818), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRQFPELTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|30020325|ref|NP_831956.1| thymidylate synthase [Bacillus cereus ATCC 14579]
 gi|206972712|ref|ZP_03233650.1| thymidylate synthase [Bacillus cereus AH1134]
 gi|218231958|ref|YP_002366936.1| thymidylate synthase [Bacillus cereus B4264]
 gi|228952578|ref|ZP_04114654.1| Thymidylate synthase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228958506|ref|ZP_04120226.1| Thymidylate synthase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229043979|ref|ZP_04191671.1| Thymidylate synthase [Bacillus cereus AH676]
 gi|229069766|ref|ZP_04203051.1| Thymidylate synthase [Bacillus cereus F65185]
 gi|229091229|ref|ZP_04222449.1| Thymidylate synthase [Bacillus cereus Rock3-42]
 gi|229109679|ref|ZP_04239265.1| Thymidylate synthase [Bacillus cereus Rock1-15]
 gi|229127635|ref|ZP_04256624.1| Thymidylate synthase [Bacillus cereus BDRD-Cer4]
 gi|229144831|ref|ZP_04273228.1| Thymidylate synthase [Bacillus cereus BDRD-ST24]
 gi|229178605|ref|ZP_04305969.1| Thymidylate synthase [Bacillus cereus 172560W]
 gi|296502804|ref|YP_003664504.1| thymidylate synthase [Bacillus thuringiensis BMB171]
 gi|33301701|sp|Q81E05|TYSY_BACCR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|29895876|gb|AAP09157.1| Thymidylate synthase [Bacillus cereus ATCC 14579]
 gi|206732367|gb|EDZ49551.1| thymidylate synthase [Bacillus cereus AH1134]
 gi|218159915|gb|ACK59907.1| thymidylate synthase [Bacillus cereus B4264]
 gi|228604763|gb|EEK62220.1| Thymidylate synthase [Bacillus cereus 172560W]
 gi|228638553|gb|EEK94986.1| Thymidylate synthase [Bacillus cereus BDRD-ST24]
 gi|228655712|gb|EEL11561.1| Thymidylate synthase [Bacillus cereus BDRD-Cer4]
 gi|228673720|gb|EEL28978.1| Thymidylate synthase [Bacillus cereus Rock1-15]
 gi|228692127|gb|EEL45866.1| Thymidylate synthase [Bacillus cereus Rock3-42]
 gi|228713387|gb|EEL65277.1| Thymidylate synthase [Bacillus cereus F65185]
 gi|228725361|gb|EEL76626.1| Thymidylate synthase [Bacillus cereus AH676]
 gi|228801133|gb|EEM48030.1| Thymidylate synthase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228807044|gb|EEM53587.1| Thymidylate synthase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|296323856|gb|ADH06784.1| thymidylate synthase [Bacillus thuringiensis BMB171]
          Length = 318

 Score =  319 bits (817), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|228985327|ref|ZP_04145488.1| Thymidylate synthase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229155822|ref|ZP_04283925.1| Thymidylate synthase [Bacillus cereus ATCC 4342]
 gi|228627666|gb|EEK84390.1| Thymidylate synthase [Bacillus cereus ATCC 4342]
 gi|228774423|gb|EEM22828.1| Thymidylate synthase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 318

 Score =  319 bits (817), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPELTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|145588568|ref|YP_001155165.1| thymidylate synthase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189036940|sp|A4SVT7|TYSY_POLSQ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145046974|gb|ABP33601.1| thymidylate synthase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 264

 Score =  319 bits (817), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/264 (57%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L++ V+  G  + DRTG GT S FG+QMRF+L+ GFP++TTKK+H KS+V+ELL
Sbjct: 1   MRQYHNLMKEVLAKGVQKSDRTGTGTISVFGHQMRFNLADGFPMVTTKKLHMKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G ++ ++L   GVSIW+EWA  DG+LGPIYG QWRSWP  +G  IDQIS +V++++
Sbjct: 61  WFLKGSTDNNWLKERGVSIWNEWAAPDGDLGPIYGYQWRSWPAPNGQHIDQISEVVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRIIVSAWNVADIPRMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+FI T GD HLY+NH EQ DLQLSR    LP++ I      L 
Sbjct: 181 YALLTHMVAQQCNLEVGDFIWTGGDCHLYSNHLEQVDLQLSRDFLPLPKLNILRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  YE H  I A V++
Sbjct: 241 DYEFEDFEIVGYESHPHIKAPVAI 264


>gi|229096735|ref|ZP_04227706.1| Thymidylate synthase [Bacillus cereus Rock3-29]
 gi|229115714|ref|ZP_04245119.1| Thymidylate synthase [Bacillus cereus Rock1-3]
 gi|228667856|gb|EEL23293.1| Thymidylate synthase [Bacillus cereus Rock1-3]
 gi|228686941|gb|EEL40848.1| Thymidylate synthase [Bacillus cereus Rock3-29]
          Length = 318

 Score =  319 bits (817), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQMD 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|293364092|ref|ZP_06610828.1| thymidylate synthase [Mycoplasma alligatoris A21JP2]
 gi|292552582|gb|EFF41356.1| thymidylate synthase [Mycoplasma alligatoris A21JP2]
          Length = 289

 Score =  318 bits (816), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 155/294 (52%), Positives = 199/294 (67%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++ V+  G  RRDRTGVGT   FG Q R+DL KGFPLLTTKK+ WK++V ELL
Sbjct: 1   MKQYLKLIKTVLNEGMVRRDRTGVGTIGIFGTQTRYDLRKGFPLLTTKKMAWKAIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WFL+GD+N+ YL  + V+IW+EW                             A K G+LG
Sbjct: 61  WFLKGDTNIKYLVDNNVNIWNEWPYEKFKKSSDFKNETLEQFIQKIKTDDDFAQKHGDLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR     D N +DQI+ I+Q L+  P+SRR IV+AWN AL+D+MALPPCH LFQ
Sbjct: 121 PVYGKQWR-----DFNGVDQITKIIQELKEKPFSRRMIVNAWNPALVDQMALPPCHALFQ 175

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           FYV  N +LS QLYQRSGD+FLG+PFNIASYSLL  M+A V G + GEF+HT+GD H+Y+
Sbjct: 176 FYVSSNDELSLQLYQRSGDLFLGVPFNIASYSLLLHMVAQVTGLRVGEFVHTIGDAHIYS 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH+EQ + QL+R P  LP + +N  I ++  F+YED  +  Y+ HA I A+V+V
Sbjct: 236 NHYEQVNEQLARRPFKLPTLSLNKEIKNIFDFKYEDIKIEDYKSHAKIKAEVAV 289


>gi|42781330|ref|NP_978577.1| thymidylate synthase [Bacillus cereus ATCC 10987]
 gi|206978240|ref|ZP_03239119.1| thymidylate synthase [Bacillus cereus H3081.97]
 gi|217959749|ref|YP_002338301.1| thymidylate synthase [Bacillus cereus AH187]
 gi|228907968|ref|ZP_04071819.1| Thymidylate synthase [Bacillus thuringiensis IBL 200]
 gi|228939370|ref|ZP_04101961.1| Thymidylate synthase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228972248|ref|ZP_04132862.1| Thymidylate synthase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228978863|ref|ZP_04139231.1| Thymidylate synthase [Bacillus thuringiensis Bt407]
 gi|62901335|sp|Q738X7|TYSY_BACC1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|42737252|gb|AAS41185.1| thymidylate synthase [Bacillus cereus ATCC 10987]
 gi|206743541|gb|EDZ54969.1| thymidylate synthase [Bacillus cereus H3081.97]
 gi|217064386|gb|ACJ78636.1| thymidylate synthase [Bacillus cereus AH187]
 gi|228780885|gb|EEM29095.1| Thymidylate synthase [Bacillus thuringiensis Bt407]
 gi|228787498|gb|EEM35463.1| Thymidylate synthase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228820330|gb|EEM66364.1| Thymidylate synthase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228851727|gb|EEM96530.1| Thymidylate synthase [Bacillus thuringiensis IBL 200]
 gi|326939942|gb|AEA15838.1| thymidylate synthase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 318

 Score =  318 bits (816), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|30262250|ref|NP_844627.1| thymidylate synthase [Bacillus anthracis str. Ames]
 gi|47527532|ref|YP_018881.1| thymidylate synthase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185093|ref|YP_028345.1| thymidylate synthase [Bacillus anthracis str. Sterne]
 gi|49477562|ref|YP_036349.1| thymidylate synthase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|65319542|ref|ZP_00392501.1| COG0207: Thymidylate synthase [Bacillus anthracis str. A2012]
 gi|118477668|ref|YP_894819.1| thymidylate synthase [Bacillus thuringiensis str. Al Hakam]
 gi|165872246|ref|ZP_02216884.1| thymidylate synthase [Bacillus anthracis str. A0488]
 gi|167633020|ref|ZP_02391346.1| thymidylate synthase [Bacillus anthracis str. A0442]
 gi|167641064|ref|ZP_02399320.1| thymidylate synthase [Bacillus anthracis str. A0193]
 gi|170686448|ref|ZP_02877669.1| thymidylate synthase [Bacillus anthracis str. A0465]
 gi|170708449|ref|ZP_02898892.1| thymidylate synthase [Bacillus anthracis str. A0389]
 gi|177650834|ref|ZP_02933731.1| thymidylate synthase [Bacillus anthracis str. A0174]
 gi|190567905|ref|ZP_03020816.1| thymidylate synthase [Bacillus anthracis Tsiankovskii-I]
 gi|196033812|ref|ZP_03101223.1| thymidylate synthase [Bacillus cereus W]
 gi|196042313|ref|ZP_03109590.1| thymidylate synthase [Bacillus cereus NVH0597-99]
 gi|196046931|ref|ZP_03114152.1| thymidylate synthase [Bacillus cereus 03BB108]
 gi|218903379|ref|YP_002451213.1| thymidylate synthase [Bacillus cereus AH820]
 gi|225864217|ref|YP_002749595.1| thymidylate synthase [Bacillus cereus 03BB102]
 gi|227814947|ref|YP_002814956.1| thymidylate synthase [Bacillus anthracis str. CDC 684]
 gi|228914838|ref|ZP_04078446.1| Thymidylate synthase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228927305|ref|ZP_04090366.1| Thymidylate synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228945857|ref|ZP_04108201.1| Thymidylate synthase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|229121792|ref|ZP_04251013.1| Thymidylate synthase [Bacillus cereus 95/8201]
 gi|229184465|ref|ZP_04311670.1| Thymidylate synthase [Bacillus cereus BGSC 6E1]
 gi|229604628|ref|YP_002866591.1| thymidylate synthase [Bacillus anthracis str. A0248]
 gi|254684819|ref|ZP_05148679.1| thymidylate synthase [Bacillus anthracis str. CNEVA-9066]
 gi|254722227|ref|ZP_05184015.1| thymidylate synthase [Bacillus anthracis str. A1055]
 gi|254737265|ref|ZP_05194969.1| thymidylate synthase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254743548|ref|ZP_05201233.1| thymidylate synthase [Bacillus anthracis str. Kruger B]
 gi|254751581|ref|ZP_05203618.1| thymidylate synthase [Bacillus anthracis str. Vollum]
 gi|254759096|ref|ZP_05211123.1| thymidylate synthase [Bacillus anthracis str. Australia 94]
 gi|301053768|ref|YP_003791979.1| thymidylate synthase [Bacillus anthracis CI]
 gi|33301703|sp|Q81R23|TYSY_BACAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901310|sp|Q6HJC7|TYSY_BACHK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231689|sp|A0RDL9|TYSY_BACAH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|30256881|gb|AAP26113.1| thymidylate synthase [Bacillus anthracis str. Ames]
 gi|47502680|gb|AAT31356.1| thymidylate synthase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179020|gb|AAT54396.1| thymidylate synthase [Bacillus anthracis str. Sterne]
 gi|49329118|gb|AAT59764.1| thymidylate synthase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|118416893|gb|ABK85312.1| thymidylate synthase [Bacillus thuringiensis str. Al Hakam]
 gi|164712039|gb|EDR17578.1| thymidylate synthase [Bacillus anthracis str. A0488]
 gi|167510962|gb|EDR86352.1| thymidylate synthase [Bacillus anthracis str. A0193]
 gi|167531832|gb|EDR94497.1| thymidylate synthase [Bacillus anthracis str. A0442]
 gi|170126688|gb|EDS95572.1| thymidylate synthase [Bacillus anthracis str. A0389]
 gi|170669524|gb|EDT20266.1| thymidylate synthase [Bacillus anthracis str. A0465]
 gi|172083295|gb|EDT68356.1| thymidylate synthase [Bacillus anthracis str. A0174]
 gi|190560960|gb|EDV14934.1| thymidylate synthase [Bacillus anthracis Tsiankovskii-I]
 gi|195993492|gb|EDX57449.1| thymidylate synthase [Bacillus cereus W]
 gi|196022306|gb|EDX60992.1| thymidylate synthase [Bacillus cereus 03BB108]
 gi|196026858|gb|EDX65488.1| thymidylate synthase [Bacillus cereus NVH0597-99]
 gi|218539044|gb|ACK91442.1| thymidylate synthase [Bacillus cereus AH820]
 gi|225789076|gb|ACO29293.1| thymidylate synthase [Bacillus cereus 03BB102]
 gi|227004156|gb|ACP13899.1| thymidylate synthase [Bacillus anthracis str. CDC 684]
 gi|228599009|gb|EEK56624.1| Thymidylate synthase [Bacillus cereus BGSC 6E1]
 gi|228661708|gb|EEL17327.1| Thymidylate synthase [Bacillus cereus 95/8201]
 gi|228813839|gb|EEM60116.1| Thymidylate synthase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228832381|gb|EEM77957.1| Thymidylate synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228844809|gb|EEM89852.1| Thymidylate synthase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229269036|gb|ACQ50673.1| thymidylate synthase [Bacillus anthracis str. A0248]
 gi|300375937|gb|ADK04841.1| thymidylate synthase [Bacillus cereus biovar anthracis str. CI]
          Length = 318

 Score =  318 bits (816), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMIDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|52143217|ref|YP_083612.1| thymidylate synthase [Bacillus cereus E33L]
 gi|62901260|sp|Q63BV5|TYSY_BACCZ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|51976686|gb|AAU18236.1| thymidylate synthase [Bacillus cereus E33L]
          Length = 318

 Score =  318 bits (816), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDKQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229029956|ref|ZP_04186024.1| Thymidylate synthase [Bacillus cereus AH1271]
 gi|228731383|gb|EEL82297.1| Thymidylate synthase [Bacillus cereus AH1271]
          Length = 318

 Score =  318 bits (816), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 199/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKIPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A+ 
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIANE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229161214|ref|ZP_04289201.1| Thymidylate synthase [Bacillus cereus R309803]
 gi|228622310|gb|EEK79149.1| Thymidylate synthase [Bacillus cereus R309803]
          Length = 318

 Score =  318 bits (816), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|300118030|ref|ZP_07055778.1| thymidylate synthase [Bacillus cereus SJ1]
 gi|298724341|gb|EFI65035.1| thymidylate synthase [Bacillus cereus SJ1]
          Length = 318

 Score =  318 bits (816), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWIESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229102840|ref|ZP_04233535.1| Thymidylate synthase [Bacillus cereus Rock3-28]
 gi|228680579|gb|EEL34761.1| Thymidylate synthase [Bacillus cereus Rock3-28]
          Length = 318

 Score =  318 bits (816), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVRYDEQMD 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229059909|ref|ZP_04197284.1| Thymidylate synthase [Bacillus cereus AH603]
 gi|228719454|gb|EEL71057.1| Thymidylate synthase [Bacillus cereus AH603]
          Length = 318

 Score =  318 bits (816), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL +H  +IW+EWA K                                   
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKRYDEQME 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229074920|ref|ZP_04207929.1| Thymidylate synthase [Bacillus cereus Rock4-18]
 gi|228708257|gb|EEL60421.1| Thymidylate synthase [Bacillus cereus Rock4-18]
          Length = 318

 Score =  318 bits (816), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWIESDEYTGPDMTDFGLRSQQDEEFKVQYDEQMD 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEIEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|260549117|ref|ZP_05823338.1| thymidylate synthase [Acinetobacter sp. RUH2624]
 gi|260407845|gb|EEX01317.1| thymidylate synthase [Acinetobacter sp. RUH2624]
          Length = 280

 Score =  318 bits (816), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 155/280 (55%), Positives = 196/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG---------ELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA  +          ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP + D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|229017549|ref|ZP_04174449.1| Thymidylate synthase [Bacillus cereus AH1273]
 gi|229023767|ref|ZP_04180256.1| Thymidylate synthase [Bacillus cereus AH1272]
 gi|228737564|gb|EEL88071.1| Thymidylate synthase [Bacillus cereus AH1272]
 gi|228743774|gb|EEL93876.1| Thymidylate synthase [Bacillus cereus AH1273]
          Length = 318

 Score =  318 bits (815), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL +H  +IW+EWA K                                   
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKSVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|163940030|ref|YP_001644914.1| thymidylate synthase [Bacillus weihenstephanensis KBAB4]
 gi|163862227|gb|ABY43286.1| Thymidylate synthase [Bacillus weihenstephanensis KBAB4]
          Length = 318

 Score =  318 bits (815), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL +H  +IW+EWA K                                   
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|307826303|ref|ZP_07656510.1| thymidylate synthase [Methylobacter tundripaludum SV96]
 gi|307732659|gb|EFO03529.1| thymidylate synthase [Methylobacter tundripaludum SV96]
          Length = 277

 Score =  318 bits (815), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 152/277 (54%), Positives = 199/277 (71%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL ++I+ GS + DRTG GT S FG+QMRF L++GFPL+TTKK+H KS+++EL+
Sbjct: 1   MKPYLQLLDNIIQQGSPKGDRTGSGTLSIFGHQMRFPLAEGFPLVTTKKIHLKSIIYELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+S+LH++ V+IW+EWAD++GELGP+YG QWRSWP  DG  IDQI  +++ L+
Sbjct: 61  WFLKGETNLSFLHQYNVNIWNEWADQNGELGPVYGHQWRSWPTPDGRHIDQIQQVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVA-------------LIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWNVA              + KMAL PCH  FQFYV +GKLSCQLYQRS
Sbjct: 121 NTPNSRRIIVSAWNVADLPDESISPQQNVALGKMALAPCHAFFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASY+LLT M+A     + G+F+ T GDVHLY NH +QA+LQL+R P  L
Sbjct: 181 CDTFLGLPFNIASYALLTHMVAQQCDLEVGDFVWTGGDVHLYLNHQQQANLQLTRKPYAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF +  Y+ H  I A +SV
Sbjct: 241 PTLRIKRRPESIFDYQYEDFEVIDYQAHEHIKAPISV 277


>gi|326569151|gb|EGE19213.1| thymidylate synthase [Moraxella catarrhalis BC1]
          Length = 280

 Score =  318 bits (815), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 153/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++         Y
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             +  DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPSSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQITDYQAHPAIKAPVAV 280


>gi|222095834|ref|YP_002529891.1| thymidylate synthase [Bacillus cereus Q1]
 gi|221239892|gb|ACM12602.1| thymidylate synthase [Bacillus cereus Q1]
          Length = 318

 Score =  318 bits (815), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP +  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPGVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|326563217|gb|EGE13485.1| thymidylate synthase [Moraxella catarrhalis 12P80B1]
          Length = 280

 Score =  318 bits (815), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 153/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++         Y
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             +  DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQIADYQAHPAIKAPVAV 280


>gi|326563467|gb|EGE13730.1| thymidylate synthase [Moraxella catarrhalis 103P14B1]
 gi|326573777|gb|EGE23734.1| thymidylate synthase [Moraxella catarrhalis 101P30B1]
          Length = 280

 Score =  318 bits (814), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 153/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++         Y
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             +  DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQITDYQAHPAIKAPVAV 280


>gi|324326272|gb|ADY21532.1| thymidylate synthase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 318

 Score =  318 bits (814), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKIQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTVGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|326571344|gb|EGE21361.1| thymidylate synthase [Moraxella catarrhalis BC8]
          Length = 280

 Score =  317 bits (813), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 153/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++         Y
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             +  DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPSSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFDFGFDDIQIADYQAHPAIKAPVAV 280


>gi|171463169|ref|YP_001797282.1| Thymidylate synthase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192707|gb|ACB43668.1| Thymidylate synthase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 264

 Score =  317 bits (813), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 149/264 (56%), Positives = 192/264 (72%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ V+  G  + DRTG GT S FG+QMRF+L  GFP++TTKK+H KS+++ELL
Sbjct: 1   MRQYHDLMKEVLTKGVQKSDRTGTGTVSVFGHQMRFNLLDGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N ++L   GVSIW+EWA  DG+LGPIYG QWRSWP  +G  IDQIS +V++++
Sbjct: 61  WFLKGSTNNNWLKERGVSIWNEWAAPDGDLGPIYGYQWRSWPTPNGQHIDQISEVVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFN AS
Sbjct: 121 KNPDSRRIIVSAWNVADIPRMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNTAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT ++A     + G+FI T GD HLY+NH EQ DLQLSR    LP++ I      + 
Sbjct: 181 YALLTHIMAQQCNLEVGDFIWTGGDCHLYSNHLEQVDLQLSRDFFPLPKLNILRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  YE H  I A V++
Sbjct: 241 EYEFEDFEITGYESHPHIKAPVAI 264


>gi|255264088|ref|ZP_05343430.1| thymidylate synthase [Thalassiobium sp. R2A62]
 gi|255106423|gb|EET49097.1| thymidylate synthase [Thalassiobium sp. R2A62]
          Length = 268

 Score =  317 bits (813), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 147/268 (54%), Positives = 199/268 (74%), Gaps = 4/268 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D L  +++ G    DRTG GT S FG Q R+ ++ GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYHDALATILETGIRSSDRTGTGTISCFGMQQRYAMADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD--GNV--IDQISSIV 116
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P  D  G +  +DQI+ +V
Sbjct: 61  WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGRQWRQFPRIDPQGGIASVDQITDLV 120

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
            ++RA P SRR IVSAWN   +  MALPPCH L+Q  + +GKL  QLYQRS D+FLG+PF
Sbjct: 121 DAIRATPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRILDGKLHLQLYQRSADMFLGVPF 180

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           NIASY+LL +MLA V G++ G+F+HTLGD H+Y+NH EQ +LQLSR+P+TLP + +  ++
Sbjct: 181 NIASYALLQLMLAHVTGYEVGDFVHTLGDAHIYSNHMEQVELQLSRTPKTLPIIRLTRDV 240

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             +  F++EDF +  Y+PH AI A V+V
Sbjct: 241 GSIFDFKFEDFEVVGYDPHPAIRAPVAV 268


>gi|171057945|ref|YP_001790294.1| thymidylate synthase [Leptothrix cholodnii SP-6]
 gi|170775390|gb|ACB33529.1| Thymidylate synthase [Leptothrix cholodnii SP-6]
          Length = 282

 Score =  317 bits (813), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 156/269 (57%), Positives = 190/269 (70%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           Q+ DL+R V   G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF
Sbjct: 14  QFEDLMRLVHTTGVAKGDRTGTGTRSLFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG+ NV +L   G +IWDEWA  DG+LGP+YGVQWRSWP  DG  IDQI+ +VQ LR++
Sbjct: 74  LRGERNVRWLQERGCTIWDEWARDDGDLGPVYGVQWRSWPTADGGHIDQIAEVVQQLRSN 133

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + +MAL PCH LFQFYV         GKLSCQLYQRS D+FLG+P
Sbjct: 134 PDSRRIIVSAWNVAELPQMALMPCHALFQFYVAPATHEGGRGKLSCQLYQRSADIFLGVP 193

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT MLA       G+FI T GD HLY+NH  Q + QL+R+P   P + I   
Sbjct: 194 FNIASYALLTHMLAQQCDLDVGDFIWTGGDCHLYDNHTTQVETQLARTPFAYPTLHIKRR 253

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  +  +DF +  Y+ H AI A V+V
Sbjct: 254 PASIFDYACDDFEVLDYQHHPAIKAPVAV 282


>gi|326572961|gb|EGE22940.1| thymidylate synthase [Moraxella catarrhalis CO72]
          Length = 280

 Score =  317 bits (813), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 153/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++         Y
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             +  DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFDFGFDDIQIADYQAHPAIKAPVAV 280


>gi|212550867|ref|YP_002309184.1| thymidylate synthase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
 gi|212549105|dbj|BAG83773.1| thymidylate synthase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
          Length = 256

 Score =  317 bits (812), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 147/264 (55%), Positives = 189/264 (71%), Gaps = 8/264 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL   V+  G  ++DRT  GT S FGY M F+L  GFPLLTTKK+H K ++HELL
Sbjct: 1   MKQYLDLCNRVLSEGVKKKDRTCTGTVSIFGYHMHFNLKDGFPLLTTKKLHVKPIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL+ HGV IWD+WA+K+G+LGPIYG QW        N  +Q+ + V +++
Sbjct: 61  WFIKGDTNIKYLNDHGVYIWDKWANKNGDLGPIYGKQW--------NFKNQLRTAVDNIK 112

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV++WNV  +  MALPPCH LFQFY+ NG+LS Q+YQRS D+FLG+PFNIAS
Sbjct: 113 NNPDSRRIIVNSWNVKDLTSMALPPCHVLFQFYISNGELSLQMYQRSADIFLGLPFNIAS 172

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLL  M+A V   + G+FIH LGD H+Y NH EQ  LQL+RSP+TLP M IN  +  + 
Sbjct: 173 YSLLLKMVAQVTNLKEGKFIHVLGDAHIYLNHLEQIQLQLTRSPKTLPIMKINSEVKSIF 232

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y P+  I  +VSV
Sbjct: 233 DFKYEDFELERYTPYPHIKGEVSV 256


>gi|93007138|ref|YP_581575.1| thymidylate synthase [Psychrobacter cryohalolentis K5]
 gi|123264366|sp|Q1Q8B2|TYSY_PSYCK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|92394816|gb|ABE76091.1| thymidylate synthase [Psychrobacter cryohalolentis K5]
          Length = 290

 Score =  317 bits (812), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 150/277 (54%), Positives = 199/277 (71%), Gaps = 16/277 (5%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLLR V+  G+++ DRTG GT S FG Q+RF+L+ GFPLLTTKKVH KS+ +ELLWFL
Sbjct: 14  YLDLLRLVLNEGTEKGDRTGTGTLSHFGAQLRFNLADGFPLLTTKKVHLKSITYELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DYDGN 107
            G ++V YL ++GV IW+EWA  +         G+LGPIYG QWR++         Y+ +
Sbjct: 74  NGSTHVDYLQQNGVRIWNEWATSEQTARFNRPAGDLGPIYGHQWRNYGATTTADGQYNSD 133

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQI+ +V+ ++ +P SRR IVS WN    D++ALPPCH LFQF+V + KLSCQLYQRS
Sbjct: 134 GVDQIAQVVEQIKTNPNSRRLIVSGWNPGEADQVALPPCHTLFQFFVADNKLSCQLYQRS 193

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY++LT M+A V   + GEFI T GD H+Y NH EQ +LQL+RS  TL
Sbjct: 194 ADLFLGVPFNIASYAMLTHMVAQVCNLEVGEFIWTGGDCHIYQNHREQVELQLTRSLYTL 253

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + +NPN+ D+ +F YED ++  YE H AI A+V+V
Sbjct: 254 PTLALNPNVKDIFAFNYEDISVDGYESHPAIKAQVAV 290


>gi|99081570|ref|YP_613724.1| thymidylate synthase [Ruegeria sp. TM1040]
 gi|123378854|sp|Q1GFV4|TYSY_SILST RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|99037850|gb|ABF64462.1| thymidylate synthase [Ruegeria sp. TM1040]
          Length = 277

 Score =  317 bits (812), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 146/277 (52%), Positives = 194/277 (70%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D L+H++  G +  DRTG GT S FG Q R+DL++GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYHDALQHILDHGVETTDRTGTGTLSCFGMQQRYDLAEGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P              Y   
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGYQWRKFPRLELAEGTLGDEPLYRAG 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQIS ++  +R  P SRR IV+AWN   +  MALPPCH L+Q  +  GK+  QLYQRS
Sbjct: 121 TVDQISELLDMIRKSPDSRRLIVTAWNPGDVPDMALPPCHSLWQLRILGGKMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LL  MLA V G++ G F+HT+GD H+Y+NH EQ  LQLSRSP++L
Sbjct: 181 ADMFLGVPFNIASYALLLHMLAHVTGYEVGSFVHTMGDAHIYSNHMEQVKLQLSRSPKSL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PQ+ I  ++  +  F+YEDF +  Y+P   I A V+V
Sbjct: 241 PQLRIARDVSSIFDFKYEDFEILGYDPDPVIKAPVAV 277


>gi|319792495|ref|YP_004154135.1| thymidylate synthase [Variovorax paradoxus EPS]
 gi|315594958|gb|ADU36024.1| thymidylate synthase [Variovorax paradoxus EPS]
          Length = 280

 Score =  317 bits (812), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 154/269 (57%), Positives = 191/269 (71%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF
Sbjct: 12  QYEDFMRHVDTHGVFKSDRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLKSIIQELLWF 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G SN ++L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS ++++L+ +
Sbjct: 72  LTGSSNNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISDVIKTLKTN 131

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + KMAL PCH  FQFYV       + GKLSCQLYQRS D+FLG+P
Sbjct: 132 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPPQAEGERGKLSCQLYQRSADIFLGVP 191

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A       G+FI T GD H+Y+NH EQ  LQLSR P   P + I   
Sbjct: 192 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVKLQLSRDPYPYPTLNIKRK 251

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  ++YEDF +  Y+    I A V+V
Sbjct: 252 PDSIFDYQYEDFEVLDYKHGDPIKAPVAV 280


>gi|119475457|ref|ZP_01615810.1| Thymidylate synthase [marine gamma proteobacterium HTCC2143]
 gi|119451660|gb|EAW32893.1| Thymidylate synthase [marine gamma proteobacterium HTCC2143]
          Length = 279

 Score =  317 bits (812), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 155/280 (55%), Positives = 197/280 (70%), Gaps = 17/280 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ VI  G+D+ DRTGVGTRS FG QMRFDLS+GFPL+TTKK+H KS+++EL+
Sbjct: 1   MQQYLDLMQDVIDNGTDKGDRTGVGTRSVFGRQMRFDLSEGFPLVTTKKIHLKSIIYELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G ++ ++L   GVSIWD+WA  DG+LGPIYG QWRSW   DG+ IDQI+ +VQ + 
Sbjct: 61  WFLNGSTDNNWLKERGVSIWDDWALADGDLGPIYGKQWRSWDCPDGSTIDQIADLVQMIN 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVS WN A +              + ALPPCH LFQFYV NG+LSCQLYQRS
Sbjct: 121 KSPDSRRLIVSGWNPADLPDESIDPRANVEQGRAALPPCHTLFQFYVANGRLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL---QLSRSP 224
            D+FLG+PFNIASYSLLT M+A     + GEF+HTLGD HLY+NH   +D+   QL R P
Sbjct: 181 ADLFLGVPFNIASYSLLTHMIAQQCDLEVGEFVHTLGDCHLYSNHLT-SDIVYKQLQREP 239

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R LPQ+ +      +  +++EDF   +Y+P   I A ++V
Sbjct: 240 RELPQLRLKRRPASIFDYQFEDFEFANYDPLPLIKAPIAV 279


>gi|229133069|ref|ZP_04261908.1| Thymidylate synthase [Bacillus cereus BDRD-ST196]
 gi|228650392|gb|EEL06388.1| Thymidylate synthase [Bacillus cereus BDRD-ST196]
          Length = 318

 Score =  317 bits (811), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLS GFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSNGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|149377241|ref|ZP_01894988.1| Thymidylate synthase [Marinobacter algicola DG893]
 gi|149358429|gb|EDM46904.1| Thymidylate synthase [Marinobacter algicola DG893]
          Length = 279

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 152/279 (54%), Positives = 190/279 (68%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ V+  G DR DRTGVGTRS FG Q+RFDL  GFPL+TTKKVH +S++ ELL
Sbjct: 1   MKAYLDLMKDVVDNGMDRGDRTGVGTRSVFGRQIRFDLQGGFPLVTTKKVHLRSIIQELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G ++ ++L    VSIW+EWA ++G+LGPIYG QWRSW   DG+ +DQIS +++ +R
Sbjct: 61  WFLQGSTDNNWLKERNVSIWNEWALENGDLGPIYGKQWRSWHCPDGSTVDQISEVIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWN A +              +MAL PCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 NKPNSRRLIVSAWNPAELPDESIGPQDNVRQGRMALAPCHCLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225
            D+FLG+PFNIASY+LLT M+A       GEF+HT GD HLY NH     +  QL R PR
Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLGVGEFVHTFGDCHLYQNHLTDNIVFEQLKREPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LPQ++I      +  +  EDF    YEPH  I A ++V
Sbjct: 241 ALPQLVIKRKPSSIFEYELEDFEFDGYEPHPGIKAPIAV 279


>gi|229011512|ref|ZP_04168700.1| Thymidylate synthase [Bacillus mycoides DSM 2048]
 gi|228749803|gb|EEL99640.1| Thymidylate synthase [Bacillus mycoides DSM 2048]
          Length = 318

 Score =  316 bits (810), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVEGDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R P   P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPHPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229079406|ref|ZP_04211948.1| Thymidylate synthase [Bacillus cereus Rock4-2]
 gi|228703939|gb|EEL56383.1| Thymidylate synthase [Bacillus cereus Rock4-2]
          Length = 318

 Score =  316 bits (810), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 196/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G   DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETFDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED  +  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLKIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|121605666|ref|YP_982995.1| thymidylate synthase [Polaromonas naphthalenivorans CJ2]
 gi|166231723|sp|A1VQZ6|TYSY_POLNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120594635|gb|ABM38074.1| thymidylate synthase [Polaromonas naphthalenivorans CJ2]
          Length = 276

 Score =  316 bits (810), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 154/270 (57%), Positives = 193/270 (71%), Gaps = 7/270 (2%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DL+R V   G+ + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH KS++ ELLW
Sbjct: 7   HQYEDLMRLVATQGAFKADRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLKSIIQELLW 66

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL G S+  +L   GV+IW+EWA  DG+LGP+YGVQWRSWP  DG  IDQI+ ++++L+ 
Sbjct: 67  FLTGSSSNHWLTERGVTIWNEWARADGDLGPVYGVQWRSWPTPDGGHIDQIAEVIKTLKT 126

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGI 174
           +P SRR IVSAWNVA +DKMAL PCH LFQFYV         GKLSCQLYQRS D+FLG+
Sbjct: 127 NPDSRRIIVSAWNVADLDKMALMPCHALFQFYVAPATEAGGKGKLSCQLYQRSADIFLGV 186

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT M+A       G+FI T GD H+Y+NH EQ  LQL R+P   P + I  
Sbjct: 187 PFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHQEQVALQLGRAPFAYPLLHIRR 246

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               +  +++EDF    Y+ H AI A V+V
Sbjct: 247 KPDSIFDYQFEDFEFLDYQHHPAIKAPVAV 276


>gi|237746462|ref|ZP_04576942.1| thymidylate synthase,TS [Oxalobacter formigenes HOxBLS]
 gi|229377813|gb|EEO27904.1| thymidylate synthase,TS [Oxalobacter formigenes HOxBLS]
          Length = 277

 Score =  316 bits (810), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 145/275 (52%), Positives = 195/275 (70%), Gaps = 14/275 (5%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LL+ +++ G+D+ DRTG GTR+ FG  MR DL  G PLLTTK++H +S++ ELLWF
Sbjct: 4   QYLNLLKEILETGADKGDRTGTGTRAVFGRMMRHDLKNGLPLLTTKRLHIRSIICELLWF 63

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+G +NV YLH + V+IWDEWA + G+LGPIYG QWRSW   DG   DQ+++++ S+R +
Sbjct: 64  LQGGTNVRYLHENKVTIWDEWATETGDLGPIYGAQWRSWEGSDGKRYDQVAAVIDSIREN 123

Query: 123 PYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           P SRRHI+SAWNVAL+              KMAL PCH ++QF V  G+LSC + QRSGD
Sbjct: 124 PDSRRHIISAWNVALLPSEKKSPQDNVKDGKMALAPCHVMYQFQVAAGRLSCMMTQRSGD 183

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           +FLGIP+N AS +LLT M+A   G + GE IH++GD+HLY NHF+QA LQLSR PR LP 
Sbjct: 184 IFLGIPYNTASTALLTHMIARQCGLEPGEVIHSIGDLHLYKNHFDQARLQLSREPRALPG 243

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + +  N   +  +  +DF +  Y+PH AI A ++V
Sbjct: 244 LKLK-NKPSIFDYTLDDFEITGYDPHPAIAAPIAV 277


>gi|228920949|ref|ZP_04084287.1| Thymidylate synthase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228838738|gb|EEM84041.1| Thymidylate synthase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 318

 Score =  316 bits (810), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
              + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CDLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|311740900|ref|ZP_07714727.1| thymidylate synthase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304420|gb|EFQ80496.1| thymidylate synthase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 275

 Score =  316 bits (810), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 148/261 (56%), Positives = 192/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++ +V+ ELLWFL
Sbjct: 16  YEDLLRRVLDKGTPKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHAVLGELLWFL 75

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G+SN+ +L  + V IW+EWAD +GELGP+YGVQWRSWP  DG  IDQI   + +L+ +P
Sbjct: 76  KGESNIKFLQDNKVRIWNEWADDNGELGPVYGVQWRSWPTPDGQHIDQIQQALDTLKNNP 135

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNVA +DKMAL PCH LFQ YV +G LS Q+YQRS D+FLG+PFNIASY+ 
Sbjct: 136 DSRRNLVSAWNVAELDKMALMPCHLLFQLYVADGTLSMQVYQRSADMFLGVPFNIASYAA 195

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GE I T GD H+YN+H EQ   QLSR PR  PQ+ ++    D+ S+ 
Sbjct: 196 LTHMFAQQAGLKVGELIWTGGDCHIYNDHVEQVKEQLSREPRPYPQLNLH-KAEDMFSYD 254

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + DF +  Y+PH  I A+VSV
Sbjct: 255 FADFEIEGYDPHPTIKAQVSV 275


>gi|228965208|ref|ZP_04126302.1| Thymidylate synthase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228794442|gb|EEM41954.1| Thymidylate synthase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 318

 Score =  316 bits (809), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTSGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +N ++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|184200215|ref|YP_001854422.1| thymidylate synthase [Kocuria rhizophila DC2201]
 gi|183580445|dbj|BAG28916.1| thymidylate synthase [Kocuria rhizophila DC2201]
          Length = 273

 Score =  316 bits (809), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 151/266 (56%), Positives = 191/266 (71%), Gaps = 5/266 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GT S FG Q+R+DLS  FPLLTTK+VH++S+  ELLWFL
Sbjct: 8   YEDLLRDVLEHGTPKTDRTGTGTLSVFGRQIRYDLSHSFPLLTTKRVHFRSLALELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            G SNV +L   GVSIWDEWAD++G+LGP+YGVQWRSWP   G  IDQI+ +V+S+R  P
Sbjct: 68  SGSSNVRWLQERGVSIWDEWADENGDLGPVYGVQWRSWPAGHGETIDQIARVVESIRTTP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNG--KLSCQLYQRSGDVFLGIPFNI 178
            SRRHIV+AWN A +D+MALPPCH LFQFYV   ++G   LSCQLYQRS D+FLG+PFNI
Sbjct: 128 DSRRHIVTAWNPAEVDRMALPPCHALFQFYVQPREDGPDALSCQLYQRSADLFLGVPFNI 187

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           ASY+LLT+M+A       GEF+ T GD H+Y NH EQ   QL+R P   P + +      
Sbjct: 188 ASYALLTVMVAQQCDLVPGEFVWTGGDCHIYTNHLEQVRTQLAREPYPYPTLRLTRRPDS 247

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  +R+EDF +  Y+ H  I A V+V
Sbjct: 248 IFDYRFEDFAVEGYQHHPGIKAPVAV 273


>gi|229150461|ref|ZP_04278677.1| Thymidylate synthase [Bacillus cereus m1550]
 gi|228632954|gb|EEK89567.1| Thymidylate synthase [Bacillus cereus m1550]
          Length = 318

 Score =  316 bits (809), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
              + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CRLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|296113703|ref|YP_003627641.1| thymidylate synthase [Moraxella catarrhalis RH4]
 gi|295921397|gb|ADG61748.1| thymidylate synthase [Moraxella catarrhalis RH4]
 gi|326562443|gb|EGE12762.1| thymidylate synthase [Moraxella catarrhalis 7169]
 gi|326562812|gb|EGE13107.1| thymidylate synthase [Moraxella catarrhalis 46P47B1]
 gi|326570637|gb|EGE20673.1| thymidylate synthase [Moraxella catarrhalis BC7]
 gi|326574801|gb|EGE24735.1| thymidylate synthase [Moraxella catarrhalis O35E]
          Length = 280

 Score =  316 bits (809), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 152/280 (54%), Positives = 195/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DY 104
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++         Y
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             +  DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT ++A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHVVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQIADYQAHPAIKAPVAV 280


>gi|251796664|ref|YP_003011395.1| thymidylate synthase [Paenibacillus sp. JDR-2]
 gi|247544290|gb|ACT01309.1| thymidylate synthase [Paenibacillus sp. JDR-2]
          Length = 320

 Score =  315 bits (808), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 156/312 (50%), Positives = 193/312 (61%), Gaps = 50/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL LLRHV++ G  + DRTG GT STFGYQMRFDL+KGFP+LTTK+V +K +V ELLWF
Sbjct: 9   EYLQLLRHVLENGVKKEDRTGTGTISTFGYQMRFDLAKGFPILTTKRVPFKLIVSELLWF 68

Query: 63  LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84
           ++GDSN+ YL +H   IWDEWA                                      
Sbjct: 69  IKGDSNIRYLLKHKNHIWDEWAFKRWVESTDYNGPDMTNFGLRSQTDEAFNVVYQEQMDK 128

Query: 85  ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                       +K G+LG +YG QWR W    G  IDQ+  I+ +++ +P SRR IVSA
Sbjct: 129 FTNLVLTDDAFAEKYGDLGNVYGKQWREWRTTQGETIDQLKGIIDTIKKNPDSRRLIVSA 188

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH +FQFYV NGKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A   
Sbjct: 189 WNPEDVPSMALPPCHTMFQFYVINGKLSCQLYQRSGDIFLGIPFNIASYALLTHLIAQEC 248

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G   GEFIHTLGD H+Y NH EQ D+QL R  R LP + INP++  +     ED  L +Y
Sbjct: 249 GLGVGEFIHTLGDAHIYLNHLEQIDIQLQRDMRELPVLAINPDVSSIFDAEVEDIKLENY 308

Query: 253 EPHAAILAKVSV 264
           +PH  I A V+V
Sbjct: 309 QPHPTIKAPVAV 320


>gi|75764380|ref|ZP_00743896.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228900828|ref|ZP_04065043.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222]
 gi|74488132|gb|EAO51832.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228858754|gb|EEN03199.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222]
          Length = 318

 Score =  315 bits (807), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +N ++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|227504242|ref|ZP_03934291.1| thymidylate synthase [Corynebacterium striatum ATCC 6940]
 gi|227199197|gb|EEI79245.1| thymidylate synthase [Corynebacterium striatum ATCC 6940]
          Length = 265

 Score =  315 bits (807), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 148/261 (56%), Positives = 191/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+++ DRTG GTRS FG Q+R++L+  FPLLTTKKV++  V+ ELLWFL
Sbjct: 6   YEDLLRKVLEEGAEKGDRTGTGTRSIFGAQLRYNLADSFPLLTTKKVYFHGVIGELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +GDSNV +L  + V IW+EWAD DGELGP+YGVQWRSWP  DG  +DQI   + +L+ +P
Sbjct: 66  KGDSNVKWLQDNNVRIWNEWADADGELGPVYGVQWRSWPTPDGTHVDQIQQALDTLQNNP 125

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNVA +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFN+ASY+ 
Sbjct: 126 DSRRNLVSAWNVAELDKMALMPCHLLFQLYVADGKLSLQVYQRSADMFLGVPFNLASYAA 185

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           L  M A   G + GE I T GD H+YN+H EQ   QLSR PR  PQ+ ++     L  + 
Sbjct: 186 LAHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSREPRPYPQLKLH-KADSLFDYT 244

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++DF +  Y+PH  I A+VSV
Sbjct: 245 FDDFEVVGYDPHPTIKAQVSV 265


>gi|228997327|ref|ZP_04156949.1| Thymidylate synthase [Bacillus mycoides Rock3-17]
 gi|229004952|ref|ZP_04162679.1| Thymidylate synthase [Bacillus mycoides Rock1-4]
 gi|228756300|gb|EEM05618.1| Thymidylate synthase [Bacillus mycoides Rock1-4]
 gi|228762419|gb|EEM11344.1| Thymidylate synthase [Bacillus mycoides Rock3-17]
          Length = 318

 Score =  315 bits (806), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 196/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL ++  +IW+EWA K                                   
Sbjct: 66  FMKGDTNIRYLLQNNNNIWNEWAFKSWVESDAYEGPDMTDFGLRSQQDEEFKKQYDEQMD 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR+W    G  IDQ+  +++ ++  P SRR +VS
Sbjct: 126 LFKKNVLEDDDFANQYGYLGDVYGKQWRAWKTTAGETIDQLKDVIEMIKKTPDSRRLLVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P + +NP++  +  F  ED TL  
Sbjct: 246 CGLEAGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSVFDFEMEDLTLEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229085186|ref|ZP_04217431.1| Thymidylate synthase [Bacillus cereus Rock3-44]
 gi|228698123|gb|EEL50863.1| Thymidylate synthase [Bacillus cereus Rock3-44]
          Length = 318

 Score =  315 bits (806), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 196/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL ++  +IW+EWA K+                                  
Sbjct: 66  FMKGDTNIRYLLQNNNNIWNEWAFKNWVESDAYEGPDMTDFGLRSQQDEEFKAQYDEQME 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR+W    G  IDQ+  +++ ++  P SRR +VS
Sbjct: 126 LFKKNVLENDAFANQYGYLGDVYGKQWRAWKTTVGETIDQLKDVIEMIKKTPDSRRLLVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P + +NP++     F  ED TL  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSAFDFEMEDLTLEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|227832620|ref|YP_002834327.1| Thymidylate synthase [Corynebacterium aurimucosum ATCC 700975]
 gi|262182896|ref|ZP_06042317.1| thymidylate synthase [Corynebacterium aurimucosum ATCC 700975]
 gi|254790235|sp|C3PEY5|TYSY_CORA7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|227453636|gb|ACP32389.1| Thymidylate synthase [Corynebacterium aurimucosum ATCC 700975]
          Length = 268

 Score =  314 bits (805), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 149/261 (57%), Positives = 192/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GT S FG Q+R++L++ FPLLTTKKV++  V+ ELLWFL
Sbjct: 9   YEDLLRRVLEEGAPKGDRTGTGTLSLFGAQLRYNLAESFPLLTTKKVYFHGVIGELLWFL 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  + V IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQI   + +L+ +P
Sbjct: 69  RGDSNVKWLQENKVRIWNEWADEDGELGPVYGVQWRSWPTPDGQHIDQIQVALDTLKNNP 128

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNV+ +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFN+ASY+ 
Sbjct: 129 DSRRNLVSAWNVSELDKMALMPCHLLFQLYVADGKLSMQVYQRSADMFLGVPFNLASYAA 188

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GE I T GD H+YN+H EQ   QLSR PR  PQ+ ++     L  + 
Sbjct: 189 LTHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSRQPREYPQLKLH-KAESLFDYD 247

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++DF +  Y+PH  I A+VSV
Sbjct: 248 FDDFEVIGYDPHPTIKAQVSV 268


>gi|218897205|ref|YP_002445616.1| thymidylate synthase [Bacillus cereus G9842]
 gi|218544363|gb|ACK96757.1| thymidylate synthase [Bacillus cereus G9842]
          Length = 318

 Score =  314 bits (805), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKGWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYALLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +N ++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|284992331|ref|YP_003410885.1| thymidylate synthase [Geodermatophilus obscurus DSM 43160]
 gi|284065576|gb|ADB76514.1| thymidylate synthase [Geodermatophilus obscurus DSM 43160]
          Length = 272

 Score =  314 bits (805), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 149/262 (56%), Positives = 193/262 (73%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLR V++ G+ ++DRTG GT S FG ++R+DL++ FPL+TTK VH++S+ +ELLWF
Sbjct: 12  QYEDLLRRVLEQGTPKQDRTGTGTVSLFGERLRYDLAERFPLITTKSVHFRSIAYELLWF 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  + VSIWDEWA  +GELGP+YGVQWRSWP   G  +DQI+ ++++LR D
Sbjct: 72  LRGDSNVRWLQENRVSIWDEWASPEGELGPVYGVQWRSWPTPGGEHVDQIAGVLETLRTD 131

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNVA +  MAL PCH LFQF+V +G+LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 132 PDSRRMVVSAWNVAALPDMALAPCHALFQFHVADGRLSCQLYQRSADMFLGVPFNIASYA 191

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A+ +G   G+ I   GD H+Y+NH +Q   QLSR     P + + P    L  +
Sbjct: 192 LLTRMVAAQVGLAPGDCIWVGGDCHVYSNHVDQVREQLSREVLPFPTLDLAP-APSLFDY 250

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YE FTLR Y  H AI A V+V
Sbjct: 251 TYEHFTLRDYRHHPAIRAAVAV 272


>gi|255324809|ref|ZP_05365922.1| thymidylate synthase [Corynebacterium tuberculostearicum SK141]
 gi|255298109|gb|EET77413.1| thymidylate synthase [Corynebacterium tuberculostearicum SK141]
          Length = 267

 Score =  314 bits (805), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 147/261 (56%), Positives = 192/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL+ V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++ +V+ ELLWFL
Sbjct: 8   YEDLLKKVLETGTPKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHAVLGELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G+SN+ +L  + V IW+EWAD +GELGP+YGVQWRSWP  DG  IDQI   + +L  +P
Sbjct: 68  KGESNIKFLQDNKVRIWNEWADDNGELGPVYGVQWRSWPTPDGQHIDQIQQALDTLNNNP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNVA +DKMAL PCH LFQ YV +G LS Q+YQRS D+FLG+PFNIASY+ 
Sbjct: 128 DSRRNLVSAWNVADLDKMALMPCHLLFQLYVADGTLSMQVYQRSADMFLGVPFNIASYAA 187

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GE I T GD H+YN+H EQ   QLSR PR  PQ+ ++    D+ S+ 
Sbjct: 188 LTHMFAQQAGLKVGELIWTGGDCHIYNDHVEQVKEQLSREPRPYPQLNLH-KAEDMFSYD 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + DF +  Y+PH  I A+VSV
Sbjct: 247 FADFEIEGYDPHPTIKAQVSV 267


>gi|71066565|ref|YP_265292.1| thymidylate synthase [Psychrobacter arcticus 273-4]
 gi|71039550|gb|AAZ19858.1| thymidylate synthase [Psychrobacter arcticus 273-4]
          Length = 300

 Score =  314 bits (804), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 148/277 (53%), Positives = 199/277 (71%), Gaps = 16/277 (5%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLLR V+  G+++ DRTG GT S FG Q+RFDL+ GFPLLTTKKVH+KS+++ELLWFL
Sbjct: 24  YLDLLRLVLSEGTEKGDRTGTGTVSHFGAQLRFDLADGFPLLTTKKVHFKSIIYELLWFL 83

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DYDGN 107
            G ++V YL ++GV IW+EWA  +         G+LGPIYG QWR++         YD +
Sbjct: 84  SGSTHVDYLQQNGVRIWNEWATAEQTARFKRLAGDLGPIYGHQWRNYGATKVEDGSYDND 143

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             DQIS +++ ++ +P SRR IVS WN    +++ALPPCH +FQF+V + KLSCQLYQRS
Sbjct: 144 GFDQISQVIEQIKTNPNSRRLIVSGWNPGEAEQVALPPCHTMFQFFVADNKLSCQLYQRS 203

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLT M+A V   + GEFI T GD H+Y NH EQ +LQL+R   TL
Sbjct: 204 ADLFLGVPFNIASYALLTHMVAQVCDLEVGEFIWTGGDCHIYQNHREQVELQLTRELYTL 263

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + +NP++ D+ +F Y+D ++  YE H AI A+V+V
Sbjct: 264 PTLTLNPDVQDIFAFNYDDISVNGYESHPAIKAQVAV 300


>gi|27904867|ref|NP_777993.1| thymidylate synthase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29428168|sp|P59427|TYSY_BUCBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|27904265|gb|AAO27098.1| thymidylate synthase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 264

 Score =  314 bits (804), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 146/264 (55%), Positives = 193/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL+ ++K GS+R+DRTG+GT S FGY M F+L  GFPL+TTKK H+ ++VHELL
Sbjct: 1   MKSYLVLLKKILKEGSNRKDRTGIGTLSVFGYHMEFNLKLGFPLITTKKCHFPAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ H +SIW+ WAD+ G LGPIYG QWRSW   DG VIDQI +++  ++
Sbjct: 61  WFLKGDTNIKYLNDHNISIWNPWADERGYLGPIYGEQWRSWKTKDGRVIDQIDNVIHLIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  + KMAL PCH LFQF+V +  L CQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPNSRRIVVSSWNVGDLHKMALLPCHVLFQFHVVDHVLHCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A     + G FI T GDVHLY NH +QA  Q+ R P  LP+++IN     + 
Sbjct: 181 YSLLTHMIAQQCNLKVGNFIWTGGDVHLYKNHIKQAKKQILRRPYLLPKLVINRKPTQIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           ++  +DF L +Y+ H +I AK+++
Sbjct: 241 NYLLQDFNLLNYKYHPSIHAKIAI 264


>gi|221124392|ref|XP_002161436.1| PREDICTED: similar to Thymidylate synthase [Hydra magnipapillata]
          Length = 265

 Score =  313 bits (803), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 8/265 (3%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           +RHV   G  + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH +S++ ELLWFL G S
Sbjct: 1   MRHVHTTGVFKSDRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLRSIIQELLWFLTGSS 60

Query: 68  NVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126
           N ++L   GV+IWDEWA+ + G+LGP+YGVQWRSWP  DG  IDQI+ ++++L+++P SR
Sbjct: 61  NNNWLKERGVTIWDEWANPETGDLGPVYGVQWRSWPTPDGGHIDQIADVIKTLKSNPDSR 120

Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIA 179
           R IVSAWNVA + KMAL PCH  FQFYV         G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 121 RIIVSAWNVAELSKMALMPCHAFFQFYVAPATEPGGKGRLSCQLYQRSADIFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LLT M+A       G+FI T GD H+Y+NH EQ +LQLSR+P   P + I      +
Sbjct: 181 SYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHTEQVELQLSRAPMAYPTLNIKRKPESI 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             +++EDF +  YE H AI A V+V
Sbjct: 241 FDYQFEDFEVLGYECHPAIKAPVAV 265


>gi|154507538|ref|ZP_02043180.1| hypothetical protein ACTODO_00017 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799327|gb|EDN81747.1| hypothetical protein ACTODO_00017 [Actinomyces odontolyticus ATCC
           17982]
          Length = 267

 Score =  313 bits (803), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 149/262 (56%), Positives = 191/262 (72%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL  +++ G+ + DRTG GTRS FG Q+R+DLSKGFPL+TTK+VH KSVV ELLWF
Sbjct: 7   QYEDLLARIMREGTPKGDRTGTGTRSLFGAQLRYDLSKGFPLITTKRVHLKSVVGELLWF 66

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G SNVS+L  +G+ IW+EWADKDGELGP+YGVQWRSW   DG  IDQIS ++++L+ +
Sbjct: 67  LSGSSNVSWLQDNGIRIWNEWADKDGELGPVYGVQWRSWNAGDGRHIDQISQVLETLKTN 126

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNV  + +MAL PCH  FQ YV +G+LS QLYQRS D+FLG+PFNIASYS
Sbjct: 127 PDSRRMVVSAWNVGDLPQMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASYS 186

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M A   G + G+FI T GD H+Y+NH EQ   QLSR P   P++ +      +  +
Sbjct: 187 LLTHMFAQQAGLEVGDFIWTGGDCHIYSNHTEQVTEQLSREPYPFPRLEL-AKAPSMFEY 245

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            ++D ++  Y+ H  I A V+V
Sbjct: 246 SFDDISVMDYQHHPTIKAPVAV 267


>gi|299821697|ref|ZP_07053585.1| thymidylate synthase [Listeria grayi DSM 20601]
 gi|299817362|gb|EFI84598.1| thymidylate synthase [Listeria grayi DSM 20601]
          Length = 314

 Score =  313 bits (803), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 153/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L + V++ G+ + DRTG GT STFGYQMRFDL+KGFP+LTTK+V ++ VV ELL
Sbjct: 1   MKQYLELEKFVLEHGTQKGDRTGTGTISTFGYQMRFDLAKGFPILTTKRVAFRLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------DKD----------- 87
           WFL GD+N+ YL +H  +IW+EWA                      +KD           
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERYVKSEAYKGPDMTDFGLRAEKDAAFREVYKQEM 120

Query: 88  -----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                            GELG IYG QWR W    G  IDQ+  ++++++  P SRR IV
Sbjct: 121 EAFKQAILTDEAFAATYGELGNIYGKQWREWKTSSGETIDQLKEVIEAIKKTPDSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDVPTMALPPCHTMFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G + GEFIHT+GD HLYNNH EQ   QLSR P+ LP + +      +  F   D +L 
Sbjct: 241 ETGLEVGEFIHTMGDAHLYNNHIEQVKEQLSREPKALPTLRLAEEPASIFDFEVADISLE 300

Query: 251 SYEPHAAILAKVSV 264
            YEPH AI A +SV
Sbjct: 301 GYEPHPAIKAPISV 314


>gi|315606206|ref|ZP_07881233.1| thymidylate synthase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312094|gb|EFU60184.1| thymidylate synthase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 267

 Score =  313 bits (803), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 149/262 (56%), Positives = 189/262 (72%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL  ++  G+ + DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KSVV ELLWF
Sbjct: 7   QYEDLLARIMSEGTPKGDRTGTGTRSVFGAQLRYDLSRGFPLITTKRVHVKSVVGELLWF 66

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G SNVS+L  HG+ IW+EWAD +G+LGP+YGVQWRSW   DG  IDQISS++++LR D
Sbjct: 67  LSGSSNVSWLQEHGIRIWNEWADGNGDLGPVYGVQWRSWNAGDGRRIDQISSVLETLRTD 126

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNV  + +MAL PCH  FQ YV +G+LS QLYQRS D+FLG+PFNIASYS
Sbjct: 127 PDSRRMVVSAWNVGDLKEMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASYS 186

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M A   G + G+F+ T GD H+Y+NH EQ   QLSR P   P++ +      +  +
Sbjct: 187 LLTHMFAQQAGLEVGDFVWTGGDCHIYSNHTEQVREQLSRDPYPFPRLEL-IKARSMFDY 245

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            +ED +   Y+ H  I A V+V
Sbjct: 246 SFEDISFAGYQHHPTIKAPVAV 267


>gi|228991229|ref|ZP_04151187.1| Thymidylate synthase [Bacillus pseudomycoides DSM 12442]
 gi|228768453|gb|EEM17058.1| Thymidylate synthase [Bacillus pseudomycoides DSM 12442]
          Length = 318

 Score =  313 bits (803), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 196/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL ++  +IW+EWA K                                   
Sbjct: 66  FMKGDTNIRYLLQNNNNIWNEWAFKSWVESDAYEGPDMTDFGLRSQQDEEFKKQYDEQMD 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR+W    G  IDQ+  +++ ++  P SRR +VS
Sbjct: 126 LFKKNVLEDDDFANQYGYLGDVYGKQWRAWKTTAGETIDQLKDVIEMIKKTPDSRRLLVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P + +NP++  +  F  +D TL  
Sbjct: 246 CGLEAGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSVFDFEMDDLTLEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|71894413|ref|YP_278521.1| thymidylate synthase [Mycoplasma synoviae 53]
 gi|123747941|sp|Q4A611|TYSY_MYCS5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|71851201|gb|AAZ43810.1| thymidylate synthase [Mycoplasma synoviae 53]
          Length = 289

 Score =  313 bits (802), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 153/294 (52%), Positives = 197/294 (67%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL H+   G+ ++DRT +GT S FG Q R++L +GFPLLTTKK+ WK++ HELL
Sbjct: 1   MKQYLHLLEHIKTSGTFKKDRTNIGTISLFGLQARYNLKEGFPLLTTKKMAWKAICHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WFL+GD+N+ YL  + V+IW+EW                             A K GELG
Sbjct: 61  WFLKGDTNIKYLVDNNVNIWNEWPYEIFKKSNDYQGESLKEFSQKIKEDSSFAQKYGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR   D+ G  +DQIS ++  ++ +P SRR IVSAWNVA IDKMALPPCH  FQ
Sbjct: 121 PVYGKQWR---DFFG--VDQISQVINDIKNNPTSRRLIVSAWNVAQIDKMALPPCHAFFQ 175

Query: 152 FYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           FYV DN +LS  LYQRSGD+FLG+PFNIASYSLL  M+A V   + GEFIHT+GD H+Y+
Sbjct: 176 FYVNDNNELSLHLYQRSGDMFLGVPFNIASYSLLLSMVAQVTNLKVGEFIHTIGDAHIYS 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH +Q + QL R+P  LP++I+N NI ++  F +ED  L +Y  H  I AKV+V
Sbjct: 236 NHIDQVNTQLERAPYKLPKLILNKNIKNIFDFTFEDIELENYISHETIKAKVAV 289


>gi|120555343|ref|YP_959694.1| thymidylate synthase [Marinobacter aquaeolei VT8]
 gi|166231710|sp|A1U3D8|TYSY_MARAV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120325192|gb|ABM19507.1| thymidylate synthase [Marinobacter aquaeolei VT8]
          Length = 279

 Score =  313 bits (801), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 149/279 (53%), Positives = 191/279 (68%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ V+  G D+ DRTGVGTRS FG QMRF+L  GFPL+TTKKVH +S+++ELL
Sbjct: 1   MKAYLDLMQDVVDNGFDKGDRTGVGTRSVFGRQMRFNLQDGFPLVTTKKVHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G ++ ++L    VSIW+EWA ++G+LGPIYG QWRSW  +DG VIDQIS +++ +R
Sbjct: 61  WFLKGSTDNTWLAERKVSIWNEWALENGDLGPIYGKQWRSWQCHDGRVIDQISEVIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWN A +              +MAL PCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 TKPNSRRLIVSAWNPAELPDESISPQDNVREGRMALAPCHCLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225
            D+FLG+PFNIASY+LLT M+A       GEF+HT GD HLY NH     +  QL R PR
Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYRNHLTDDIVFEQLRREPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP+++I      +  +  EDF    Y+P   I A +++
Sbjct: 241 ALPKLVIKRKPESIFGYELEDFEFEGYDPSPVIKAPIAI 279


>gi|332185611|ref|ZP_08387359.1| thymidylate synthase [Sphingomonas sp. S17]
 gi|332014589|gb|EGI56646.1| thymidylate synthase [Sphingomonas sp. S17]
          Length = 264

 Score =  312 bits (800), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 151/266 (56%), Positives = 186/266 (69%), Gaps = 4/266 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G  + DRTG GT S FG+QMRFDL++GFP+LTTKK+H +S++ ELL
Sbjct: 1   MRQYLDLMDRVLTQGVQQMDRTGTGTLSVFGHQMRFDLAQGFPVLTTKKLHLRSIIVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L    VSIWDEWAD+ G+LGP+YG QWR W   DG  IDQI+ +++ +R
Sbjct: 61  WFLRGDTNVRWLQEQKVSIWDEWADEAGDLGPVYGKQWRDWATADGRHIDQIAELIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN   +  MAL PCHCLFQ +V NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 TQPASRRQIVSAWNPGDLHAMALAPCHCLFQTHVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII--NPNIVD 238
           Y+LLT MLA     + GEFI T GD HLY NH EQA  QL R P  LP++ I   P+ +D
Sbjct: 181 YALLTHMLAQQCDLEVGEFIWTGGDCHLYLNHLEQARTQLGREPGALPRLEITRKPDAID 240

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  EDF L  Y     I A V++
Sbjct: 241 --GYALEDFVLHDYVAQRHIKAVVAI 264


>gi|289178234|gb|ADC85480.1| Thymidylate synthase [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 297

 Score =  312 bits (800), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL
Sbjct: 34  YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 93

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  H V IWDEWAD++G+LGP+YGVQWRSWP    D     IDQIS++++ +
Sbjct: 94  KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 153

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 154 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 213

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   P+M I      L
Sbjct: 214 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEIR-KADSL 272

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++Y +F +  Y  H  I A ++V
Sbjct: 273 FDYQYSNFHIADYRYHPTIKAPIAV 297


>gi|183602019|ref|ZP_02963388.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis HN019]
 gi|241190505|ref|YP_002967899.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241195911|ref|YP_002969466.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218904|gb|EDT89546.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis HN019]
 gi|240248897|gb|ACS45837.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250465|gb|ACS47404.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295793492|gb|ADG33027.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis V9]
          Length = 290

 Score =  312 bits (800), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL
Sbjct: 27  YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  H V IWDEWAD++G+LGP+YGVQWRSWP    D     IDQIS++++ +
Sbjct: 87  KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   P+M I      L
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEIR-KADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++Y +F +  Y  H  I A ++V
Sbjct: 266 FDYQYSNFHIADYRYHPTIKAPIAV 290


>gi|47458869|ref|YP_015731.1| thymidylate synthase [Mycoplasma mobile 163K]
 gi|62901312|sp|Q6KIQ6|TYSY_MYCMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|47458197|gb|AAT27520.1| thymidylate synthase [Mycoplasma mobile 163K]
          Length = 288

 Score =  312 bits (800), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 149/293 (50%), Positives = 194/293 (66%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL+ +++ G  + DRT  GT S FG Q R+DLSKGFPL+TTKKVH KS++ ELL
Sbjct: 1   MEQYLSLLKEILEKGQKKEDRTNTGTISYFGTQRRYDLSKGFPLVTTKKVHLKSIIFELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL  +GV+IW+EW                             A K GELG
Sbjct: 61  WFIKGDTNIKYLVDNGVNIWNEWPYETFKKSKDFNGESLADFVLKIKSDTLFAKKYGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++     N  DQ+   +++++ +P SRR IVSAW    I KMALPPCH  FQ
Sbjct: 121 PVYGKQWRNF-----NGTDQLFDAIETIKKNPDSRRIIVSAWAANEISKMALPPCHAFFQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV+N KLS QLYQRSGD FLG+PFNIASYS+L  M+A +  ++ GEFIHT+GD H+Y N
Sbjct: 176 FYVNNNKLSLQLYQRSGDTFLGVPFNIASYSILLAMVAQITNYEVGEFIHTIGDTHIYLN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ + QLSR P  LP++++N  I ++  F+YED  +  YE H AI AKV+V
Sbjct: 236 HLEQVEEQLSRKPLKLPKLVLNKKIKNIDDFKYEDIEIIDYESHPAIKAKVAV 288


>gi|39938779|ref|NP_950545.1| thymidylate synthase [Onion yellows phytoplasma OY-M]
 gi|62901327|sp|Q6YQT0|TYSY_ONYPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|39721888|dbj|BAD04378.1| thymidylate synthase [Onion yellows phytoplasma OY-M]
          Length = 288

 Score =  312 bits (799), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 149/293 (50%), Positives = 201/293 (68%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+ YLDL R +++ GS R DRT  GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL
Sbjct: 1   MNTYLDLCRFILQKGSFRNDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WFL+GD+N+ YL ++ V+IW+EW                             A K G LG
Sbjct: 61  WFLKGDTNICYLVQNNVNIWNEWPYQKYQQSAFFQNETLKEFLEKIKNDPLFAIKHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR   D++G  +DQI  ++  ++ +P SRR I+++WN  L+++MALPPCH L Q
Sbjct: 121 PVYGKQWR---DFNG--VDQIKFLISEIKTNPNSRRLILNSWNPPLLNQMALPPCHVLIQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV  GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V   Q  EFIHTLGD H+Y+N
Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H  Q   Q+ R+P+ LPQMI+NP+I ++  F++ DFTL++Y+    +   ++V
Sbjct: 236 HLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFSDFTLQNYQCDGILKGDIAV 288


>gi|152002501|dbj|BAF73525.1| thymidylate synthase [Onion yellows phytoplasma OY-W]
          Length = 288

 Score =  312 bits (799), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 149/293 (50%), Positives = 201/293 (68%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+ YLDL R +++ GS R DRT  GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL
Sbjct: 1   MNTYLDLCRFILQKGSFRNDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WFL+GD+N+ YL ++ V+IW+EW                             A K G LG
Sbjct: 61  WFLKGDTNICYLVQNNVNIWNEWPYQKYQQSAFFQNETLKEFVEKIKNDPLFAIKHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR   D++G  +DQI  ++  ++ +P SRR I+++WN  L+++MALPPCH L Q
Sbjct: 121 PVYGKQWR---DFNG--VDQIKFLISEIKTNPNSRRLILNSWNPPLLNQMALPPCHVLIQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV  GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V   Q  EFIHTLGD H+Y+N
Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H  Q   Q+ R+P+ LPQMI+NP+I ++  F++ DFTL++Y+    +   ++V
Sbjct: 236 HLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFSDFTLQNYQCDGILKGDIAV 288


>gi|228933544|ref|ZP_04096395.1| Thymidylate synthase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228826142|gb|EEM71924.1| Thymidylate synthase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
          Length = 318

 Score =  312 bits (799), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 148/313 (47%), Positives = 195/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +   +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQQNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + G F+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGAFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I A V+V
Sbjct: 306 YDPHPVIKAPVAV 318


>gi|219682928|ref|YP_002469311.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis AD011]
 gi|219620578|gb|ACL28735.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis AD011]
          Length = 266

 Score =  312 bits (799), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL
Sbjct: 3   YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 62

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  H V IWDEWAD++G+LGP+YGVQWRSWP    D     IDQIS++++ +
Sbjct: 63  KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 123 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   P+M I      L
Sbjct: 183 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEIR-KADSL 241

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++Y +F +  Y  H  I A ++V
Sbjct: 242 FDYQYSNFHIADYRYHPTIKAPIAV 266


>gi|85057710|ref|YP_456626.1| thymidylate synthase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123738900|sp|Q2NJ46|TYSY_AYWBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|84789815|gb|ABC65547.1| thymidylate synthase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 288

 Score =  312 bits (799), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 149/293 (50%), Positives = 202/293 (68%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+ YLDL R + + GS R+DRT  GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL
Sbjct: 1   MNTYLDLCRFIFQKGSFRKDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WFL+GD+N+ YL ++ V+IW+EW                             A K G LG
Sbjct: 61  WFLKGDTNIFYLVQNNVNIWNEWPYQKYQQSDFFQNETLKEFVKKIKNDPLFATKHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR   D++G  +DQI  ++  ++A+P SRR I+++WN +L+++MALPPCH L Q
Sbjct: 121 PVYGKQWR---DFNG--VDQIKFLISEIKANPNSRRLILNSWNPSLLNQMALPPCHVLIQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV  GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V   Q  EFIHTLGD H+Y+N
Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H  Q   Q+ R+P+ LPQMI+NP+I ++  F++ DF L++Y+    +   ++V
Sbjct: 236 HITQVQTQIQRTPKKLPQMILNPDIKNIDDFKFIDFILKNYQCDGILKGDIAV 288


>gi|192362015|ref|YP_001980991.1| thymidylate synthase [Cellvibrio japonicus Ueda107]
 gi|190688180|gb|ACE85858.1| thymidylate synthase [Cellvibrio japonicus Ueda107]
          Length = 282

 Score =  311 bits (798), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 150/279 (53%), Positives = 192/279 (68%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V++ G  R DRTG GTRS FG Q+RFDL++GFPL+TTK VH KSV+ ELL
Sbjct: 4   MKQYLDLMRDVVENGVTRGDRTGTGTRSVFGRQLRFDLARGFPLVTTKTVHLKSVIVELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G ++V++L   G SIW+EWA + G+LGP+YG QWRSW   DG+ IDQIS +++ ++
Sbjct: 64  WFLQGRTDVTWLQERGCSIWNEWAAESGDLGPVYGKQWRSWACPDGSTIDQISQVIEQIK 123

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
           A P SRR IVSAWN A +              +MAL  CH LFQFYV +GKLSCQLYQRS
Sbjct: 124 AKPNSRRLIVSAWNPADLPDEALSPQENVRQGRMALAACHTLFQFYVADGKLSCQLYQRS 183

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225
            D+FLG+PFNIASY+LLT M+A       G+F+HT GD HLYNNH     +  QL+R PR
Sbjct: 184 ADLFLGVPFNIASYALLTHMIAQQCDLGVGDFVHTFGDCHLYNNHITDDIVYEQLTREPR 243

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP++II      +  +  EDF    Y+P+  I A ++V
Sbjct: 244 NLPRLIIRRRPSSIFDYELEDFEFEGYQPYPRIAAPIAV 282


>gi|293189215|ref|ZP_06607938.1| thymidylate synthase [Actinomyces odontolyticus F0309]
 gi|292821678|gb|EFF80614.1| thymidylate synthase [Actinomyces odontolyticus F0309]
          Length = 267

 Score =  311 bits (798), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 148/262 (56%), Positives = 190/262 (72%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL  +++ G+ + DRTG GTRS FG Q+R+DLSKGFPL+TTK+VH KSVV ELLWF
Sbjct: 7   QYEDLLARIMREGTPKGDRTGTGTRSLFGAQLRYDLSKGFPLITTKRVHLKSVVGELLWF 66

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G SNVS+L  +G+ IW+EWAD+DGELGP+YGVQWRSW   DG  IDQIS ++++L+ +
Sbjct: 67  LSGSSNVSWLQDNGIRIWNEWADEDGELGPVYGVQWRSWNAGDGRHIDQISQVLETLKTN 126

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNV  + +MAL PCH  FQ YV +G+LS QLYQRS D+FLG+PFNIASYS
Sbjct: 127 PDSRRMVVSAWNVGDLPQMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASYS 186

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M A   G + G+FI T GD H+Y+NH EQ   QLSR P   P++ +      +  +
Sbjct: 187 LLTHMFAQQAGLEVGDFIWTGGDCHIYSNHTEQVTEQLSREPYPFPRLEL-AKAPSMFEY 245

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            ++D ++  Y  H  I A V+V
Sbjct: 246 SFDDISVTDYRHHPTIKAPVAV 267


>gi|162447551|ref|YP_001620683.1| thymidylate synthase [Acholeplasma laidlawii PG-8A]
 gi|189036925|sp|A9NG27|TYSY_ACHLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|161985658|gb|ABX81307.1| thymidylate synthase [Acholeplasma laidlawii PG-8A]
          Length = 288

 Score =  311 bits (798), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 152/293 (51%), Positives = 196/293 (66%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL RH+++ G+ + DRTG GT+S FGYQM FDL  GFPLLTTKK   K ++HELL
Sbjct: 1   MKQYLDLARHIMENGTLKSDRTGTGTKSIFGYQMFFDLKDGFPLLTTKKTFLKGIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIW-----------------------------DEWADKDGELG 91
           WF++GD+N+ YL  + V IW                             DE+A K G+LG
Sbjct: 61  WFIKGDTNIKYLVDNNVGIWTDWPYKNYMNSSEYQGESIKEFSDKIRQSDEFAKKWGDLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++     N +DQI  I+ +L+ +P SRR ++SAWN A I +M LPPCH L Q
Sbjct: 121 PVYGSQWRNF-----NGVDQIEYIINTLKTNPDSRRMVLSAWNPAEIGQMMLPPCHTLIQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV + KLS QLYQRSGDVFLGIPFNIASY++  MM+A V GF+ G F+HT+GD H+Y N
Sbjct: 176 FYVVDNKLSLQLYQRSGDVFLGIPFNIASYAVFLMMVAQVTGFELGSFVHTIGDAHIYTN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           HF+Q +LQL+R+PR LP + IN +I  L  F+YEDF L  Y+P+  I   V+V
Sbjct: 236 HFDQINLQLTRTPRRLPILKINKSITRLEDFKYEDFELVGYDPYPPIKGVVAV 288


>gi|311693477|gb|ADP96350.1| thymidylate synthase [marine bacterium HP15]
          Length = 279

 Score =  311 bits (797), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 147/279 (52%), Positives = 191/279 (68%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ V+  G D+ DRTGVGTRS FG Q+RF+L +GFPL+TTKKVH +S+++ELL
Sbjct: 1   MKAYLDLMQDVVDNGFDKGDRTGVGTRSVFGRQIRFNLQEGFPLVTTKKVHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG ++ ++L    VSIW+EWA ++G+LGPIYG QWRSW   +G V+DQIS +++ +R
Sbjct: 61  WFLRGSTDNTWLQERKVSIWNEWALENGDLGPIYGKQWRSWQCPNGEVVDQISEVIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWN A +              +MAL PCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 TKPNSRRLIVSAWNPAELPDESIGPQDNVREGRMALAPCHCLFQFYVVDGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225
            D+FLG+PFNIASY+LLT M+A       GEF+HT GD HLY NH     +  QL R PR
Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYQNHLTDDIVFEQLKREPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP ++I      +  +  EDF    Y+P+  I A +++
Sbjct: 241 ALPTLVIKRKPASIFEYELEDFDFEGYDPYPGIKAPIAI 279


>gi|56708291|ref|YP_170187.1| thymidylate synthase [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110670762|ref|YP_667319.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457413|ref|ZP_03665886.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370775|ref|ZP_04986780.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875112|ref|ZP_05247822.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|62901196|sp|Q5NFK5|TYSY_FRATT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123063432|sp|Q14H07|TYSY_FRAT1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54113189|gb|AAV29228.1| NT02FT1259 [synthetic construct]
 gi|56604783|emb|CAG45862.1| thymidylate synthase [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110321095|emb|CAL09245.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569018|gb|EDN34672.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254841111|gb|EET19547.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159521|gb|ADA78912.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 274

 Score =  311 bits (796), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 151/277 (54%), Positives = 187/277 (67%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++ + G  + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H  SVVHELL
Sbjct: 1   MQEYLNFLKYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL+ + V IW+EWA  DGELGPIYG QWR   D++G  IDQI+ ++Q L+
Sbjct: 61  WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWR---DFNGQGIDQIADVIQMLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN  ++                ALPPCH +FQFYV N KLSC L QRS
Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTNMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF   +Y  H AI AK+SV
Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274


>gi|16801054|ref|NP_471322.1| thymidylate synthase [Listeria innocua Clip11262]
 gi|22096226|sp|Q92AD4|TYSY_LISIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|16414489|emb|CAC97218.1| lin1988 [Listeria innocua Clip11262]
          Length = 314

 Score =  310 bits (795), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|152975426|ref|YP_001374943.1| thymidylate synthase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189036926|sp|A7GP90|TYSY_BACCN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|152024178|gb|ABS21948.1| Thymidylate synthase [Bacillus cytotoxicus NVH 391-98]
          Length = 318

 Score =  310 bits (795), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 193/313 (61%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL +H  +IW+EWA K+                                  
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKNWVESDEYKGPDMTNFGLRSQEDEAFKTQYDEQME 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR+W    G  IDQ+  +++ ++  P SRR IVS
Sbjct: 126 IFKKNVLEDDEFARKYGYLGDVYGKQWRAWKTAAGETIDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G   GEF+HT+GD H+Y NHFEQ   QL+R PR  P + +N ++  +  F   D T+  
Sbjct: 246 CGLAVGEFVHTIGDAHIYTNHFEQVKKQLAREPRPFPTLKLNSDVKSVFDFEMGDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|313623197|gb|EFR93452.1| thymidylate synthase [Listeria innocua FSL J1-023]
          Length = 314

 Score =  310 bits (795), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|332312316|gb|EGJ25411.1| Thymidylate synthase [Listeria monocytogenes str. Scott A]
          Length = 317

 Score =  310 bits (795), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 4   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 64  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 123

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 124 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 183

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 184 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 243

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 244 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 303

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 304 GYNPDPAIKAPISV 317


>gi|313618225|gb|EFR90295.1| thymidylate synthase [Listeria innocua FSL S4-378]
          Length = 314

 Score =  310 bits (795), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKARILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|257453633|ref|ZP_05618923.1| thymidylate synthase [Enhydrobacter aerosaccus SK60]
 gi|257449091|gb|EEV24044.1| thymidylate synthase [Enhydrobacter aerosaccus SK60]
          Length = 286

 Score =  310 bits (795), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 151/277 (54%), Positives = 195/277 (70%), Gaps = 16/277 (5%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ V+  G  + DRTG GT S FG QMRFDL +GFPLLTTKK+H KSV++ELLWFL
Sbjct: 10  YLDLLKLVLDNGIQKGDRTGTGTISYFGAQMRFDLQEGFPLLTTKKIHTKSVIYELLWFL 69

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DYDGN 107
           +GD++V YL  +GV IW+EWA  +         GELG +YG QWR++         Y  +
Sbjct: 70  KGDTHVQYLQDNGVRIWNEWATAEQTARFGKPEGELGAVYGHQWRNFGASKKADGSYHSD 129

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             DQIS +V  ++ +P SRR IVS WN    +++ALPPCH LFQF+V +GKLSCQLYQRS
Sbjct: 130 GFDQISWVVNEIKNNPNSRRLIVSGWNPLEANEVALPPCHTLFQFFVADGKLSCQLYQRS 189

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLT M+A V G   GEF+ T GD H+YNNH +Q D QLSR P  L
Sbjct: 190 ADLFLGVPFNIASYALLTHMIAHVTGLGVGEFVWTGGDCHIYNNHLQQVDEQLSREPFAL 249

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +NP+I D+ +F + D  + +Y+ HA I A+VSV
Sbjct: 250 PKLWLNPDITDIFAFDFNDIKIENYQSHATIKAEVSV 286


>gi|46908107|ref|YP_014496.1| thymidylate synthase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093257|ref|ZP_00231029.1| thymidylate synthase [Listeria monocytogenes str. 4b H7858]
 gi|254826083|ref|ZP_05231084.1| thymidylate synthase [Listeria monocytogenes FSL J1-194]
 gi|254852778|ref|ZP_05242126.1| thymidylate synthase [Listeria monocytogenes FSL R2-503]
 gi|254931955|ref|ZP_05265314.1| thymidylate synthase [Listeria monocytogenes HPB2262]
 gi|254992225|ref|ZP_05274415.1| thymidylate synthase [Listeria monocytogenes FSL J2-064]
 gi|255521581|ref|ZP_05388818.1| thymidylate synthase [Listeria monocytogenes FSL J1-175]
 gi|300763815|ref|ZP_07073812.1| thymidylate synthase [Listeria monocytogenes FSL N1-017]
 gi|62901328|sp|Q71YE1|TYSY_LISMF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|46881377|gb|AAT04673.1| thymidylate synthase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018389|gb|EAL09150.1| thymidylate synthase [Listeria monocytogenes str. 4b H7858]
 gi|258606105|gb|EEW18713.1| thymidylate synthase [Listeria monocytogenes FSL R2-503]
 gi|293583507|gb|EFF95539.1| thymidylate synthase [Listeria monocytogenes HPB2262]
 gi|293595324|gb|EFG03085.1| thymidylate synthase [Listeria monocytogenes FSL J1-194]
 gi|300515551|gb|EFK42601.1| thymidylate synthase [Listeria monocytogenes FSL N1-017]
 gi|328466226|gb|EGF37383.1| thymidylate synthase [Listeria monocytogenes 1816]
 gi|328473593|gb|EGF44430.1| thymidylate synthase [Listeria monocytogenes 220]
          Length = 314

 Score =  310 bits (794), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|217963973|ref|YP_002349651.1| thymidylate synthase [Listeria monocytogenes HCC23]
 gi|254790241|sp|B8DDM8|TYSY_LISMH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|217333243|gb|ACK39037.1| thymidylate synthase [Listeria monocytogenes HCC23]
 gi|307571457|emb|CAR84636.1| thyA [Listeria monocytogenes L99]
          Length = 314

 Score =  310 bits (794), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|226224478|ref|YP_002758585.1| thymidylate synthase [Listeria monocytogenes Clip81459]
 gi|259550791|sp|C1KWH4|TYSY_LISMC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|225876940|emb|CAS05649.1| Putative thymidylate synthase [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
          Length = 314

 Score =  310 bits (794), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPKDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|84687905|ref|ZP_01015772.1| thymidylate synthase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664099|gb|EAQ10596.1| thymidylate synthase [Rhodobacterales bacterium HTCC2654]
          Length = 272

 Score =  310 bits (794), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 146/272 (53%), Positives = 193/272 (70%), Gaps = 8/272 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L+ V+  G    DRTG GT S FG Q R+ L++GFPL+TTKK+H +S+VHELL
Sbjct: 1   MRQYLDALKTVLDQGVPSTDRTGTGTTSYFGMQCRYPLAEGFPLVTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV--------IDQI 112
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P  D           +DQI
Sbjct: 61  WFLSGDTNIGYLKENGVSIWDEWADENGDLGPVYGHQWRHFPKIDRGADGAPVIGEVDQI 120

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
           + +V+ +R  P SRR IVSAWN   +  MALPPCH L+Q  +  GKL  QLYQRS D+FL
Sbjct: 121 ADLVEQIRRSPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRIIGGKLHLQLYQRSADMFL 180

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G+PFNIASY+LL +MLA V G++ G+F+H++GD H+Y+NH +Q   QLSR+PR LPQ+ I
Sbjct: 181 GVPFNIASYALLQVMLAHVTGYEPGDFVHSIGDAHIYSNHMDQVHEQLSRTPRPLPQIEI 240

Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             ++  +  F+Y+DF    Y+P  AI A V+V
Sbjct: 241 KRHVGSIFDFKYDDFAFPGYDPAPAIKAPVAV 272


>gi|118497833|ref|YP_898883.1| thymidylate synthase [Francisella tularensis subsp. novicida U112]
 gi|134301752|ref|YP_001121720.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|187931486|ref|YP_001891470.1| thymidylate synthase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|194323806|ref|ZP_03057582.1| thymidylate synthase [Francisella tularensis subsp. novicida FTE]
 gi|208779897|ref|ZP_03247241.1| thymidylate synthase [Francisella novicida FTG]
 gi|254373190|ref|ZP_04988679.1| thymidylate synthase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254374644|ref|ZP_04990125.1| thymidylate synthase [Francisella novicida GA99-3548]
 gi|166231701|sp|A0Q7B4|TYSY_FRATN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231702|sp|A4IXE8|TYSY_FRATW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|118423739|gb|ABK90129.1| thymidylate synthase [Francisella novicida U112]
 gi|134049529|gb|ABO46600.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|151570917|gb|EDN36571.1| thymidylate synthase [Francisella novicida GA99-3549]
 gi|151572363|gb|EDN38017.1| thymidylate synthase [Francisella novicida GA99-3548]
 gi|187712395|gb|ACD30692.1| thymidylate synthase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|194322170|gb|EDX19652.1| thymidylate synthase [Francisella tularensis subsp. novicida FTE]
 gi|208744352|gb|EDZ90652.1| thymidylate synthase [Francisella novicida FTG]
 gi|332678547|gb|AEE87676.1| Thymidylate synthase [Francisella cf. novicida Fx1]
          Length = 274

 Score =  310 bits (794), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 151/277 (54%), Positives = 187/277 (67%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++ + G  + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLKYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL+ + V IW+EWA  DGELGPIYG QWR   D++G  IDQI+ ++Q L+
Sbjct: 61  WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWR---DFNGQGIDQIADVIQMLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN  ++                ALPPCH +FQFYV N KLSC L QRS
Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF   +Y  H AI AK+SV
Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274


>gi|126665225|ref|ZP_01736208.1| Thymidylate synthase [Marinobacter sp. ELB17]
 gi|126630595|gb|EBA01210.1| Thymidylate synthase [Marinobacter sp. ELB17]
          Length = 279

 Score =  310 bits (794), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 146/279 (52%), Positives = 193/279 (69%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  GS+R DRTGVGTRS FG Q+RF+L +GFPL+TTKK+H +S++ ELL
Sbjct: 1   MRAYLDLMQDIVDNGSNRGDRTGVGTRSVFGRQVRFNLQQGFPLVTTKKIHLRSIIQELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G ++ ++L    V+IW+EWA  +G+LGPIYG QWRSW   DG VIDQIS ++  +R
Sbjct: 61  WFLQGSTDNNWLTERKVNIWNEWALDNGDLGPIYGKQWRSWQCQDGRVIDQISDLIDQIR 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWN A +              +MAL PCHCLFQFYV++GKLSCQLYQRS
Sbjct: 121 QKPNSRRLIVSAWNPAELPDESIGPQDNVRQGRMALAPCHCLFQFYVNDGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSPR 225
            D+FLG+PFNIASY+LLT M+A       GEF+HT GD HLY+NH     +  QL R PR
Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYSNHLTDDIVFEQLKREPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP+++I      +  +  +DF  + YEP+  I A +++
Sbjct: 241 ALPKLVIKRKPNSIFEYNLDDFAFKGYEPYPGIKAPIAI 279


>gi|320094077|ref|ZP_08025892.1| thymidylate synthase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978968|gb|EFW10496.1| thymidylate synthase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 265

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 148/262 (56%), Positives = 186/262 (70%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL  V+  G  + DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KSVV ELLWF
Sbjct: 5   QYEDLLARVMAEGVAKGDRTGTGTRSVFGAQLRYDLSRGFPLITTKRVHLKSVVGELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G SNV +L  HG+ IW+EWAD+ GELGP+YGVQWRSW    G  IDQIS+++++LR D
Sbjct: 65  LSGSSNVGWLQEHGIRIWNEWADEGGELGPVYGVQWRSWNAGGGTRIDQISNVLETLRTD 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNV  + +MAL PCH  FQ Y  +G+LS QLYQRS D+FLG+PFNIASYS
Sbjct: 125 PDSRRMVVSAWNVGDLPQMALEPCHAFFQLYAAHGRLSLQLYQRSADLFLGVPFNIASYS 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M A   G Q G+FI T GD H+Y+NH EQ   QLSR P   P++ +      +  +
Sbjct: 185 LLTHMFAQQAGLQVGDFIWTGGDCHIYSNHTEQVAEQLSREPYPFPRLEL-AKAPSMFDY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            ++D ++  Y+ H  I A V+V
Sbjct: 244 SFDDVSVEGYQHHPTIKAPVAV 265


>gi|308235845|ref|ZP_07666582.1| thymidylate synthase [Gardnerella vaginalis ATCC 14018]
 gi|311114431|ref|YP_003985652.1| thymidylate synthase [Gardnerella vaginalis ATCC 14019]
 gi|310945925|gb|ADP38629.1| thymidylate synthase [Gardnerella vaginalis ATCC 14019]
          Length = 290

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 191/265 (72%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG Q+RFDLSK FPL+TTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILMEGTLKSDRTGTGTISLFGQQIRFDLSKSFPLITTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  +GV IWDEWAD++G+LGP+YGVQWRSWP    +     IDQI+++++ +
Sbjct: 87  KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTQENPNRTIDQIANVMELI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNHPDSRRMIVSAWNPAEVENMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   PQ+ I      +
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEIR-KADSI 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
            S+ Y DF +  Y+ H  I A V+V
Sbjct: 266 FSYDYSDFKVVDYKHHPTIKAPVAV 290


>gi|148654128|ref|YP_001281221.1| thymidylate synthase [Psychrobacter sp. PRwf-1]
 gi|172048593|sp|A5WHY0|TYSY_PSYWF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148573212|gb|ABQ95271.1| thymidylate synthase [Psychrobacter sp. PRwf-1]
          Length = 286

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 148/277 (53%), Positives = 194/277 (70%), Gaps = 16/277 (5%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL+R+V   G+++ DRTG GTRS FG Q+RFDL  GFPLLTTKKVH KS+ +EL WFL
Sbjct: 10  YLDLIRYVRDHGTEKGDRTGTGTRSHFGAQLRFDLKDGFPLLTTKKVHMKSITYELFWFL 69

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPD-------YDGN 107
           +GD++V YL  HGV IW+EW+  +         GELGPIYG QWR++         Y+ +
Sbjct: 70  KGDTHVKYLQDHGVRIWNEWSTAEQTARFGRPEGELGPIYGHQWRNYGATKAEDGRYNQD 129

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQ+  +++ ++++P SRR IVS WN A   ++ALPPCH LFQF+V +GKLSCQLYQRS
Sbjct: 130 GVDQVVEVIEQIKSNPNSRRLIVSGWNPAEATQVALPPCHTLFQFFVADGKLSCQLYQRS 189

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASYSLLT M+A V   + GEFI T GD HLY NH +Q + QLSR    L
Sbjct: 190 ADLFLGVPFNIASYSLLTHMIAQVCDLEVGEFIWTGGDCHLYQNHIDQVNEQLSREAYEL 249

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +NP I D+  F ++D  +  Y+ H AI A V+V
Sbjct: 250 PKLWLNPEIKDIFDFTFDDIRVEGYQSHPAIKAPVAV 286


>gi|315282890|ref|ZP_07871198.1| thymidylate synthase [Listeria marthii FSL S4-120]
 gi|313613464|gb|EFR87300.1| thymidylate synthase [Listeria marthii FSL S4-120]
          Length = 314

 Score =  309 bits (792), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAESDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 AQFKKRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|291457285|ref|ZP_06596675.1| thymidylate synthase [Bifidobacterium breve DSM 20213]
 gi|291381120|gb|EFE88638.1| thymidylate synthase [Bifidobacterium breve DSM 20213]
          Length = 290

 Score =  309 bits (792), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 151/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +L+R ++  G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL
Sbjct: 27  YENLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSQYFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP    +     IDQIS+++  +
Sbjct: 87  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR +VSAWN A ++KMALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNHPDSRRMVVSAWNPAEVEKMALPPCHALFQFYVANGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   P + I      L
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHVYDNHVDQFLEQLSRDPYPYPTIEIR-KADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDFT+  Y+ H  I A V+V
Sbjct: 266 FDYQYEDFTIVGYQHHPTIKAPVAV 290


>gi|116873310|ref|YP_850091.1| thymidylate synthase [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|123463950|sp|A0AJY0|TYSY_LISW6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116742188|emb|CAK21312.1| thymidylate synthase [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 314

 Score =  309 bits (792), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EQFKTRILEDEGFANKYGELGNIYGKQWREWKTSQGETIDQLADVIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPTTIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYHPDPAIKAPISV 314


>gi|313608068|gb|EFR84144.1| thymidylate synthase [Listeria monocytogenes FSL F2-208]
          Length = 317

 Score =  309 bits (791), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 4   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 64  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 123

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 124 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 183

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 184 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 243

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 244 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 303

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 304 GYNPDPAIKAPISV 317


>gi|254831525|ref|ZP_05236180.1| thymidylate synthase [Listeria monocytogenes 10403S]
          Length = 314

 Score =  309 bits (791), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  +I A +SV
Sbjct: 301 GYNPDPSIKAPISV 314


>gi|47096916|ref|ZP_00234494.1| thymidylate synthase [Listeria monocytogenes str. 1/2a F6854]
 gi|224500227|ref|ZP_03668576.1| thymidylate synthase [Listeria monocytogenes Finland 1988]
 gi|254827241|ref|ZP_05231928.1| thymidylate synthase [Listeria monocytogenes FSL N3-165]
 gi|254899429|ref|ZP_05259353.1| thymidylate synthase [Listeria monocytogenes J0161]
 gi|254912432|ref|ZP_05262444.1| thymidylate synthase [Listeria monocytogenes J2818]
 gi|254936759|ref|ZP_05268456.1| thymidylate synthase [Listeria monocytogenes F6900]
 gi|47014729|gb|EAL05684.1| thymidylate synthase [Listeria monocytogenes str. 1/2a F6854]
 gi|258599624|gb|EEW12949.1| thymidylate synthase [Listeria monocytogenes FSL N3-165]
 gi|258609355|gb|EEW21963.1| thymidylate synthase [Listeria monocytogenes F6900]
 gi|293590413|gb|EFF98747.1| thymidylate synthase [Listeria monocytogenes J2818]
          Length = 314

 Score =  309 bits (791), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRIIEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  +I A +SV
Sbjct: 301 GYNPDPSIKAPISV 314


>gi|290892999|ref|ZP_06555988.1| thymidylate synthase [Listeria monocytogenes FSL J2-071]
 gi|290557359|gb|EFD90884.1| thymidylate synthase [Listeria monocytogenes FSL J2-071]
          Length = 314

 Score =  309 bits (791), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDDAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVTDISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|284802320|ref|YP_003414185.1| thymidylate synthase [Listeria monocytogenes 08-5578]
 gi|284995462|ref|YP_003417230.1| thymidylate synthase [Listeria monocytogenes 08-5923]
 gi|284057882|gb|ADB68823.1| thymidylate synthase [Listeria monocytogenes 08-5578]
 gi|284060929|gb|ADB71868.1| thymidylate synthase [Listeria monocytogenes 08-5923]
          Length = 314

 Score =  309 bits (791), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRVERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  +I A +SV
Sbjct: 301 GYNPDPSIKAPISV 314


>gi|227494604|ref|ZP_03924920.1| thymidylate synthase [Actinomyces coleocanis DSM 15436]
 gi|226832338|gb|EEH64721.1| thymidylate synthase [Actinomyces coleocanis DSM 15436]
          Length = 267

 Score =  308 bits (790), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 145/261 (55%), Positives = 190/261 (72%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GT S FG Q+R+DLS+GFPL+TTK+VH KSVV EL+WFL
Sbjct: 8   YEDLLREVLETGAVKEDRTGTGTVSVFGRQLRYDLSQGFPLITTKRVHLKSVVGELIWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            G SNV +L  +G+ IW+EWAD++G+LGP+YGVQWRSWP  DG  IDQ++ I++++R++P
Sbjct: 68  NGSSNVKWLQDNGIRIWNEWADENGDLGPVYGVQWRSWPTPDGEHIDQLTQILETVRSNP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNVA +DKMAL PCH  FQ YV +GKLS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 128 DSRRMLVSAWNVAELDKMALAPCHSFFQLYVVDGKLSLQIYQRSADLFLGVPFNIASYAL 187

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A     Q G+ + T GD H+Y+NHFEQ   QLSR     P + +      L  ++
Sbjct: 188 LTHMIAQQCDLQVGDLVWTGGDCHIYSNHFEQVQEQLSRKAYPFPTLELR-KAESLFDYQ 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            ED  +  Y+ H  I A V+V
Sbjct: 247 IEDVAVHDYQHHPTIKAPVAV 267


>gi|110004417|emb|CAK98755.1| putative thymidylate synthase transmembrane protein [Spiroplasma
           citri]
          Length = 298

 Score =  308 bits (790), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 146/294 (49%), Positives = 197/294 (67%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL + R +++ G ++ DRT  GT S FGYQMRF+LS+GFP+LTTKK+H+KS+V+ELL
Sbjct: 10  MEQYLKMARFILEHGQEKDDRTNTGTISYFGYQMRFNLSEGFPILTTKKIHFKSIVYELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91
           WF++GD+N+ YL  H V IW+EW  K+                             G+LG
Sbjct: 70  WFIKGDTNIKYLVDHDVRIWNEWPYKNYQASSKYNNETLAEFVEKIKTDANFAAEFGDLG 129

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++     N +DQ++ ++++L+ +PYSRRHI+SAWN A +D+MALPPCH L Q
Sbjct: 130 PVYGKQWRNF-----NGVDQLAKLLENLKKNPYSRRHIISAWNPAEVDEMALPPCHTLIQ 184

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           FYV  + KLSCQLYQRS DVFLG+PFNIASY+LLT ++A V+G   G+F+HTLGD H+Y 
Sbjct: 185 FYVSKDNKLSCQLYQRSADVFLGVPFNIASYALLTHLIAQVVGLDAGDFVHTLGDCHIYK 244

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH  Q   QL RS   LP + +N  I  L  F++ED  L +Y+P   I   V+V
Sbjct: 245 NHLSQIKEQLRRSLGKLPTLKLNQTISSLFDFKFEDIMLENYDPAPLIKGTVAV 298


>gi|315303800|ref|ZP_07874296.1| thymidylate synthase [Listeria ivanovii FSL F6-596]
 gi|313627829|gb|EFR96466.1| thymidylate synthase [Listeria ivanovii FSL F6-596]
          Length = 314

 Score =  308 bits (790), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL  GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQAGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------DKD----------- 87
           WFL GD+N+ YL +H  +IW+EWA                      +KD           
Sbjct: 61  WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSSDYTGEDMTDFGLRAEKDPAFKEVYQTEM 120

Query: 88  -----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                            GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKARILEEEEFASKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QL+R+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLTRTPHALPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P +AI A +SV
Sbjct: 301 GYNPDSAIKAPISV 314


>gi|255027643|ref|ZP_05299629.1| thymidylate synthase [Listeria monocytogenes FSL J2-003]
          Length = 314

 Score =  308 bits (790), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRIIEDEAFATKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|254369108|ref|ZP_04985120.1| hypothetical protein FTAG_00039 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122058|gb|EDO66198.1| hypothetical protein FTAG_00039 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 274

 Score =  308 bits (789), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 150/277 (54%), Positives = 186/277 (67%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++ + G  + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLKYIKENGVLKNDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL+ + V IW+EWA  DGELGPIYG QWR   D++G  IDQI+ ++Q L+
Sbjct: 61  WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWR---DFNGQGIDQIADVIQMLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +V AWN  ++                ALPPCH +FQFYV N KLSC L QRS
Sbjct: 118 TNPNSRRILVLAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF   +Y  H AI AK+SV
Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274


>gi|16803914|ref|NP_465399.1| thymidylate synthase [Listeria monocytogenes EGD-e]
 gi|224501326|ref|ZP_03669633.1| thymidylate synthase [Listeria monocytogenes FSL R2-561]
 gi|22096224|sp|Q8Y626|TYSY_LISMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|16411328|emb|CAC99952.1| lmo1874 [Listeria monocytogenes EGD-e]
          Length = 314

 Score =  308 bits (789), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 151/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRIIEDEAFATKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  +I A +SV
Sbjct: 301 GYNPDPSIKAPISV 314


>gi|332184365|gb|AEE26619.1| Thymidylate synthase [Francisella cf. novicida 3523]
          Length = 274

 Score =  308 bits (789), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 150/277 (54%), Positives = 187/277 (67%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L ++ + G  + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLNYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL+ + V IW+EWA  DGELGPIYG QWR   D++G  IDQI+ ++Q L+
Sbjct: 61  WFLSGSTNIKYLNDNNVRIWNEWATSDGELGPIYGKQWR---DFNGQGIDQIADVIQMLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN  ++                ALPPCH +FQFYV N +LSC L QRS
Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNRLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I      +  ++YEDF   +Y  H AI AK+SV
Sbjct: 238 PKLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274


>gi|310287943|ref|YP_003939202.1| Thymidylate synthase [Bifidobacterium bifidum S17]
 gi|309251880|gb|ADO53628.1| Thymidylate synthase [Bifidobacterium bifidum S17]
          Length = 311

 Score =  308 bits (788), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 149/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL
Sbjct: 48  YEDLVRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFL 107

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  H V IWD+WAD++G+LGP+YGVQWRSWP    +     IDQI +++  +
Sbjct: 108 KGSSNVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIGNVLDLI 167

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIA
Sbjct: 168 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIA 227

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   P++ I      L
Sbjct: 228 SYSLLTMMIAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEIR-KADSL 286

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDFT+  Y  H  I A V+V
Sbjct: 287 FDYQYEDFTIVDYRHHPTIKAPVAV 311


>gi|241765073|ref|ZP_04763065.1| Thymidylate synthase [Acidovorax delafieldii 2AN]
 gi|241365310|gb|EER60132.1| Thymidylate synthase [Acidovorax delafieldii 2AN]
          Length = 286

 Score =  307 bits (787), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 153/273 (56%), Positives = 188/273 (68%), Gaps = 11/273 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DL+RHV   G D+ DRTG GT+S FG+QMRFDL +GFPL+TTKKVH KS++ ELLWF
Sbjct: 14  QYEDLMRHVFTHGVDKGDRTGTGTKSVFGHQMRFDLREGFPLVTTKKVHLKSIIVELLWF 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW----PDYDGNVIDQISSIVQS 118
           L G S+  +L   GV+IWDEWA KDG+LGP+YGVQWRSW    P+     IDQI  ++ +
Sbjct: 74  LTGSSSNLWLKERGVTIWDEWARKDGDLGPVYGVQWRSWPAPTPENPRGHIDQIQQVIDT 133

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVF 171
           L+ +P SRR IVSAWNVA +DKMAL PCH  FQFYV         G LSCQLYQRS D+F
Sbjct: 134 LKTNPDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPAQEPGGRGTLSCQLYQRSADIF 193

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLT M+A       G+FI T GD H+Y+NH EQ   QL R+P   P + 
Sbjct: 194 LGVPFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHHEQVRTQLERAPYPYPTLR 253

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           I      +  ++YEDF +  Y+ H AI A V+V
Sbjct: 254 IKRRPDSIFDYQYEDFEVLDYQCHPAIKAPVAV 286


>gi|311064820|ref|YP_003971546.1| thymidylate synthase [Bifidobacterium bifidum PRL2010]
 gi|310867140|gb|ADP36509.1| ThyA Thymidylate synthase [Bifidobacterium bifidum PRL2010]
          Length = 290

 Score =  307 bits (786), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  H V IWD+WAD++G+LGP+YGVQWRSWP    +     IDQI +++  +
Sbjct: 87  KGSSNVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIGNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIA
Sbjct: 147 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   P++ I      L
Sbjct: 207 SYSLLTMMIAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEIR-KADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDFT+  Y  H  I A V+V
Sbjct: 266 FDYQYEDFTIVDYRHHPTIKAPVAV 290


>gi|89256104|ref|YP_513466.1| thymidylate synthase [Francisella tularensis subsp. holarctica LVS]
 gi|115314578|ref|YP_763301.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502122|ref|YP_001428187.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010790|ref|ZP_02275721.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367429|ref|ZP_04983455.1| thymidylate synthase [Francisella tularensis subsp. holarctica 257]
 gi|290954512|ref|ZP_06559133.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312028|ref|ZP_06802843.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|122325397|sp|Q0BMM0|TYSY_FRATO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123401607|sp|Q2A486|TYSY_FRATH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231700|sp|A7NB78|TYSY_FRATF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|89143935|emb|CAJ79154.1| thymidylate synthase [Francisella tularensis subsp. holarctica LVS]
 gi|115129477|gb|ABI82664.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253245|gb|EBA52339.1| thymidylate synthase [Francisella tularensis subsp. holarctica 257]
 gi|156252725|gb|ABU61231.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 274

 Score =  307 bits (786), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/277 (53%), Positives = 185/277 (66%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++ + G  + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLKYIKENGVLKNDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL+ + V IW+EWA  DGELGPIYG QWR   D++G  IDQI+ ++Q L+
Sbjct: 61  WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWR---DFNGQGIDQIADVIQMLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +V AWN  ++                ALPPCH +FQFYV N KLSC L QRS
Sbjct: 118 TNPNSRRILVLAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GE I + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGELIWSGGDCHIYNNHIEQVNEQLSREPLAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF   +Y  H AI AK+SV
Sbjct: 238 PTLKILRKSNSIFDYKYEDFEFENYNHHPAIKAKISV 274


>gi|283457486|ref|YP_003362064.1| thymidylate synthase [Rothia mucilaginosa DY-18]
 gi|283133479|dbj|BAI64244.1| thymidylate synthase [Rothia mucilaginosa DY-18]
          Length = 293

 Score =  306 bits (785), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 152/287 (52%), Positives = 191/287 (66%), Gaps = 28/287 (9%)

Query: 4   YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           Y DLLR +++   D       R DRTG GT   FG QMRFDL + FPL+TTK+VH+KSV 
Sbjct: 9   YEDLLREILEENKDAIAADAQRSDRTGTGTFGVFGRQMRFDLRESFPLITTKRVHFKSVA 68

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            ELLWFLRG SNV +L   GV+IWDEWAD++G+LGP+YGVQWRSWP  DG  IDQI+ ++
Sbjct: 69  IELLWFLRGSSNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 128

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVF 171
           +SL+ +P SRRHIV+AWN A +D MALPPCH LFQFYV        +LSCQLYQRS D+F
Sbjct: 129 ESLKNNPSSRRHIVTAWNPAEVDSMALPPCHALFQFYVHERADGVKELSCQLYQRSADMF 188

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ-- 229
           LG+PFNIASY+LLT ++A  +G + GEFI T GD H+Y+NH EQ   QL     T P+  
Sbjct: 189 LGVPFNIASYALLTYLIAQEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYG--TDPEGN 246

Query: 230 ------------MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                       ++I      +  + YEDF L  Y+ H  I A ++V
Sbjct: 247 PYPPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGIAAPIAV 293


>gi|315226195|ref|ZP_07867983.1| thymidylate synthase [Parascardovia denticolens DSM 10105]
 gi|315120327|gb|EFT83459.1| thymidylate synthase [Parascardovia denticolens DSM 10105]
          Length = 291

 Score =  306 bits (785), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/266 (56%), Positives = 193/266 (72%), Gaps = 6/266 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL R ++  GS + DRTG GT S FG QMRFDLS+ FPL+TTK V +K V +ELLWFL
Sbjct: 27  YEDLAREILMTGSLKSDRTGTGTISLFGKQMRFDLSRSFPLITTKSVWFKGVSYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWP----DYDGNVIDQISSIVQS 118
           +G SNV +L  + V IWDEWAD + GELGP+YGVQWRSWP    D     IDQI++++Q 
Sbjct: 87  KGSSNVRWLQENKVHIWDEWADPETGELGPVYGVQWRSWPAPTKDDSHRTIDQIANVLQM 146

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           ++ +P SRR IVSAWN A +++MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNI
Sbjct: 147 IKDNPDSRRMIVSAWNPAEVERMALPPCHALFQFYVADGRLSCQLYQRSADMFLGVPFNI 206

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           ASYSLLT M+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   PQ++++     
Sbjct: 207 ASYSLLTCMMAQQTGLEPGEFVWTGGDCHIYDNHVDQFLEQLSRQPYPYPQLVMD-KADS 265

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           L  ++YEDF + +Y+  A I A V+V
Sbjct: 266 LFDYQYEDFHVLNYQHGAKIAAPVAV 291


>gi|294786608|ref|ZP_06751862.1| thymidylate synthase [Parascardovia denticolens F0305]
 gi|294485441|gb|EFG33075.1| thymidylate synthase [Parascardovia denticolens F0305]
          Length = 289

 Score =  306 bits (785), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/266 (56%), Positives = 193/266 (72%), Gaps = 6/266 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL R ++  GS + DRTG GT S FG QMRFDLS+ FPL+TTK V +K V +ELLWFL
Sbjct: 25  YEDLAREILMTGSLKSDRTGTGTISLFGKQMRFDLSRSFPLITTKSVWFKGVSYELLWFL 84

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWP----DYDGNVIDQISSIVQS 118
           +G SNV +L  + V IWDEWAD + GELGP+YGVQWRSWP    D     IDQI++++Q 
Sbjct: 85  KGSSNVRWLQENKVHIWDEWADPETGELGPVYGVQWRSWPAPTKDDSHRTIDQIANVLQM 144

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           ++ +P SRR IVSAWN A +++MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNI
Sbjct: 145 IKDNPDSRRMIVSAWNPAEVERMALPPCHALFQFYVADGRLSCQLYQRSADMFLGVPFNI 204

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           ASYSLLT M+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   PQ++++     
Sbjct: 205 ASYSLLTCMMAQQTGLEPGEFVWTGGDCHIYDNHVDQFLEQLSRQPYPYPQLVMD-KADS 263

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           L  ++YEDF + +Y+  A I A V+V
Sbjct: 264 LFDYQYEDFHVLNYQHGAKIAAPVAV 289


>gi|300742119|ref|ZP_07072140.1| thymidylate synthase [Rothia dentocariosa M567]
 gi|300381304|gb|EFJ77866.1| thymidylate synthase [Rothia dentocariosa M567]
          Length = 302

 Score =  306 bits (785), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 149/281 (53%), Positives = 190/281 (67%), Gaps = 17/281 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           + + LD  R  I   + R+DRTG GT   FG QMRFDL   FPL+TTK+VH+KSV  ELL
Sbjct: 22  LREILDENRDAIAADAQRKDRTGTGTFGVFGRQMRFDLRDSFPLITTKRVHFKSVAVELL 81

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG SN+ +L   GV+IWDEWAD++G+LGP+YGVQWRSWP  DG  IDQI+ +++SL+
Sbjct: 82  WFLRGSSNIRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVIESLK 141

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVFLGIP 175
            +P SRRHIVSAWN A +D+MALPPCH +FQFYV        +LSCQLYQRS D+FLG+P
Sbjct: 142 TNPSSRRHIVSAWNPAEVDEMALPPCHAMFQFYVHERPDGVKELSCQLYQRSADMFLGVP 201

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SRSPR-------- 225
           FNIASY+LLT ++A  +G + GEFI T GD H+Y+NH EQ   QL     P         
Sbjct: 202 FNIASYALLTYLIAHEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGNDPEGNPYPPRE 261

Query: 226 --TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               P+++I      +  + YEDF L  Y+ H  I A ++V
Sbjct: 262 PYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGISAPIAV 302


>gi|227546560|ref|ZP_03976609.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|227212877|gb|EEI80756.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC
           55813]
          Length = 290

 Score =  306 bits (784), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP    +     IDQIS+++  +
Sbjct: 87  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P + I      L
Sbjct: 207 SYSLLTMMMAQQTGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEIR-KADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290


>gi|241668230|ref|ZP_04755808.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254876765|ref|ZP_05249475.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842786|gb|EET21200.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 274

 Score =  306 bits (784), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 147/277 (53%), Positives = 190/277 (68%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++   G+++ DRTG GT S FGYQMRFDL +GFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLKYIKDNGTNKGDRTGTGTTSIFGYQMRFDLQQGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +NV YL+ + V IW+EWA ++GELGPIYG QWR   D++G  IDQI+ +++ L+
Sbjct: 61  WFLSGSTNVKYLNDNKVRIWNEWATEEGELGPIYGKQWR---DFNGEGIDQIAEVIEMLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN  ++                ALPPCH +FQFYV + KLSC L QRS
Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVAKGNSALPPCHAMFQFYVADNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMIAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF  ++Y+ H AI AK+SV
Sbjct: 238 PTLKILRKPSSIFDYKYEDFEFQNYKHHPAIKAKISV 274


>gi|322689847|ref|YP_004209581.1| thymidylate synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|320461183|dbj|BAJ71803.1| thymidylate synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 290

 Score =  306 bits (784), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP    +     IDQIS+++  +
Sbjct: 87  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P + I      L
Sbjct: 207 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEIR-KADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290


>gi|323167835|gb|EFZ53526.1| thymidylate synthase [Shigella sonnei 53G]
 gi|323951715|gb|EGB47590.1| thymidylate synthase [Escherichia coli H252]
          Length = 231

 Score =  306 bits (783), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 136/231 (58%), Positives = 177/231 (76%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           MRF+L  GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+
Sbjct: 1   MRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG QWR+WP  DG  IDQI++++  L+ DP SRR IVSAWNV  +DKMAL PCH  FQFY
Sbjct: 61  YGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V +GKLSCQLYQRS DVFLG+PFNIASY+LL  M+A     + G+F+ T GD HLY+NH 
Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHM 180

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +Q  LQLSR PR LP++II      +  +R+EDF +  Y+PH  I A V++
Sbjct: 181 DQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 231


>gi|322643701|gb|EFY40253.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|323226466|gb|EGA10674.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
          Length = 231

 Score =  306 bits (783), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 136/231 (58%), Positives = 177/231 (76%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+
Sbjct: 1   MRFNLQEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG QWR+WP  DG  IDQI++++  L+ DP SRR IVSAWNV  +DKMAL PCH  FQFY
Sbjct: 61  YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V +GKLSCQLYQRS DVFLG+PFNIASY+LL  M+A       G+F+ T GD HLY+NH 
Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHM 180

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           EQ  LQLSR PR LP+++I      L  +R++DF +  Y+PH  I A V++
Sbjct: 181 EQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 231


>gi|283782899|ref|YP_003373653.1| thymidylate synthase [Gardnerella vaginalis 409-05]
 gi|283441780|gb|ADB14246.1| thymidylate synthase [Gardnerella vaginalis 409-05]
          Length = 290

 Score =  305 bits (782), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 148/265 (55%), Positives = 190/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R+++  G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL
Sbjct: 27  YEDLVRNILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  +GV IWDEWAD++G+LGP+YGVQWRSWP    +     IDQI++++  +
Sbjct: 87  KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   PQ+ I      +
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEIR-KADSI 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y+ H  I A V+V
Sbjct: 266 FDYDYSDFKVVEYKHHPTIKAPVAV 290


>gi|298253462|ref|ZP_06977254.1| thymidylate synthase [Gardnerella vaginalis 5-1]
 gi|297532857|gb|EFH71743.1| thymidylate synthase [Gardnerella vaginalis 5-1]
          Length = 290

 Score =  305 bits (782), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 148/265 (55%), Positives = 189/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  +GV IWDEWAD++G+LGP+YGVQWRSWP    +     IDQI++++  +
Sbjct: 87  KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   PQ+ I      +
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEIR-KADSI 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y+ H  I A V+V
Sbjct: 266 FDYDYSDFKVVEYKHHPTIKAPVAV 290


>gi|326803555|ref|YP_004321373.1| thymidylate synthase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650675|gb|AEA00858.1| thymidylate synthase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 313

 Score =  305 bits (782), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 156/314 (49%), Positives = 195/314 (62%), Gaps = 51/314 (16%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +++ G D+ DRTGVGTRS FGYQMRFDL +GFP+LTTKKV +  +  ELL
Sbjct: 1   MKQYLDLLQTILEKGHDKSDRTGVGTRSIFGYQMRFDLREGFPILTTKKVAFGLIKSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFLRGD+N+ YL  +   IWDEWA                                    
Sbjct: 61  WFLRGDTNIRYLLENNNHIWDEWAFENWVNSEDYQGPDMTNFGLRAEKDPEFKAEYLKVK 120

Query: 85  ---------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                    D+D     GELG +YG QWR W   DG  IDQI++I++ LR +P SRR I+
Sbjct: 121 ADFCQKILNDEDFAKKYGELGNVYGKQWRDWETRDGGSIDQIANILEQLRNNPDSRRIIL 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH L QFYV++GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDVPNMALPPCHTLSQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + G+F+HT GDVH+YNNHF+Q   QLSR P  LPQ+ I  +   +     +D  L 
Sbjct: 241 EVGLEVGDFVHTFGDVHIYNNHFDQVKEQLSRQPGQLPQLEIKSD-KSMFDLEKDDIVLN 299

Query: 251 SYEPHAAILAKVSV 264
           +Y P   I A V+V
Sbjct: 300 NYHPQTPIKAPVAV 313


>gi|255326790|ref|ZP_05367866.1| thymidylate synthase [Rothia mucilaginosa ATCC 25296]
 gi|255296007|gb|EET75348.1| thymidylate synthase [Rothia mucilaginosa ATCC 25296]
          Length = 293

 Score =  305 bits (782), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 152/287 (52%), Positives = 190/287 (66%), Gaps = 28/287 (9%)

Query: 4   YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           Y DLLR +++   D       R DRTG GT   FG QMRFDL + FPL+TTK+VH+KSV 
Sbjct: 9   YEDLLREILEENKDAIAADAQRSDRTGTGTFGVFGRQMRFDLRESFPLITTKRVHFKSVA 68

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            ELLWFLRG SNV +L   GV+IWDEWAD++G+LGP+YGVQWRSWP  DG  IDQI+ ++
Sbjct: 69  IELLWFLRGSSNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 128

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVF 171
            SL+ +P SRRHIVSAWN A +D MALPPCH LFQFYV        +LSCQLYQRS D+F
Sbjct: 129 DSLKNNPGSRRHIVSAWNPAEVDNMALPPCHALFQFYVHERADGVKELSCQLYQRSADMF 188

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ-- 229
           LG+PFNIASY+LLT ++A  +G + GEF+ T GD H+Y+NH EQ   QL     T P+  
Sbjct: 189 LGVPFNIASYALLTYLIAQEVGMEPGEFVWTGGDCHIYSNHLEQVKKQLGYG--TDPEGN 246

Query: 230 ------------MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                       ++I      +  + YEDF L  Y+ H  I A ++V
Sbjct: 247 PYPPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGIAAPIAV 293


>gi|297242824|ref|ZP_06926762.1| thymidylate synthase [Gardnerella vaginalis AMD]
 gi|296889035|gb|EFH27769.1| thymidylate synthase [Gardnerella vaginalis AMD]
          Length = 290

 Score =  305 bits (781), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 148/265 (55%), Positives = 189/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  +GV IWDEWAD++G+LGP+YGVQWRSWP    +     IDQI++++  +
Sbjct: 87  KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   PQ+ I      +
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEIR-KADSI 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y+ H  I A V+V
Sbjct: 266 FDYDYSDFKVVDYKHHPTIKAPVAV 290


>gi|212716385|ref|ZP_03324513.1| hypothetical protein BIFCAT_01304 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660638|gb|EEB21213.1| hypothetical protein BIFCAT_01304 [Bifidobacterium catenulatum DSM
           16992]
          Length = 303

 Score =  305 bits (781), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 149/265 (56%), Positives = 186/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL
Sbjct: 40  YEDLVRRILTEGTLKSDRTGTGTISLFGQQMRFDLSEYFPLLTTKTVFFKGLAYELLWFL 99

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L  H V IWDEWAD++G+LGP+YG QWRSWP    D     IDQIS+++  +
Sbjct: 100 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLV 159

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 160 KNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 219

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G Q GEF+ T GD H+Y+NH +Q   QLSR P   P + IN     L
Sbjct: 220 SYSLLTLMIAQQAGLQPGEFVWTGGDCHVYDNHIDQVLEQLSRDPYPYPHIRIN-KAASL 278

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y  H  I A V+V
Sbjct: 279 FDYDYSDFEIVDYRHHPTIKAPVAV 303


>gi|167627658|ref|YP_001678158.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|189036935|sp|B0TYI1|TYSY_FRAP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|167597659|gb|ABZ87657.1| Thymidylate synthase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 274

 Score =  305 bits (781), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 146/277 (52%), Positives = 189/277 (68%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++   G+ + DRTG GT S FGYQMRFDL +GFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLKYIKDNGTKKGDRTGTGTTSIFGYQMRFDLQQGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +NV YL+ + V IW+EWA ++GELGPIYG QWR   D++G  IDQI+ +++ L+
Sbjct: 61  WFLSGSTNVKYLNDNKVRIWNEWATEEGELGPIYGKQWR---DFNGEGIDQIAEVIEMLK 117

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN  ++                ALPPCH +FQFY+ + KLSC L QRS
Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVAKGNSALPPCHAMFQFYIADNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMIAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF  ++Y+ H AI AK+SV
Sbjct: 238 PTLKILRKPSSIFDYKYEDFEFQNYKHHPAIKAKISV 274


>gi|313632688|gb|EFR99662.1| thymidylate synthase [Listeria seeligeri FSL N1-067]
          Length = 314

 Score =  305 bits (781), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 150/314 (47%), Positives = 192/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L  GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 ESFKTRILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G   GEF+HT+GD HLYNNH EQ   QLSR+P  LP++I++     +  F   D +L 
Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLILSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P A+I A +SV
Sbjct: 301 GYNPDASIKAPISV 314


>gi|31544250|ref|NP_852828.1| thymidylate synthase [Mycoplasma gallisepticum str. R(low)]
 gi|33860236|sp|Q9XC19|TYSY_MYCGA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|31541094|gb|AAP56396.1| Thymidylate synthase [Mycoplasma gallisepticum str. R(low)]
 gi|284930289|gb|ADC30228.1| Thymidylate synthase [Mycoplasma gallisepticum str. R(high)]
 gi|284931056|gb|ADC30994.1| Thymidylate synthase [Mycoplasma gallisepticum str. F]
          Length = 289

 Score =  305 bits (781), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 146/294 (49%), Positives = 194/294 (65%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V+  G  ++DRT  GT S FG Q R+DL +GFPLLTTKK+ WK++ HELL
Sbjct: 1   MKTYLDLLEKVMTKGEVKKDRTNTGTISYFGTQSRYDLREGFPLLTTKKMAWKAICHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WFL+GD+N+ YL  H V+IW+EW                             A + G+LG
Sbjct: 61  WFLKGDTNIKYLVDHNVNIWNEWPYEAFKKSNDFKGESLQDFVEKIKTDNQFAQQYGKLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR     D N +DQI  ++  ++ +P+SRR IVSAWN   I +MALPPCH  FQ
Sbjct: 121 PVYGKQWR-----DFNGVDQIEWVINEIKTNPFSRRLIVSAWNPGEIKEMALPPCHSFFQ 175

Query: 152 FYVDNG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           F+V+   ++S QLYQRSGD+FLG+PFNIASYSLL +M+A V G +  EFIHT+GD H+Y+
Sbjct: 176 FFVNEKYEISLQLYQRSGDLFLGVPFNIASYSLLLLMVAQVTGLKPAEFIHTIGDTHIYS 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH EQ  +QL R P+ LP++ +NP+I ++  FR+ED +L +YE H  I  KV+V
Sbjct: 236 NHLEQVKIQLQREPKKLPKVTLNPDIKNIFDFRFEDISLENYEHHDPIKGKVAV 289


>gi|213428469|ref|ZP_03361219.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
          Length = 231

 Score =  305 bits (780), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 136/231 (58%), Positives = 177/231 (76%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+
Sbjct: 1   MRFNLLEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG QWR+WP  DG  IDQI++++  L+ DP SRR IVSAWNV  +DKMAL PCH  FQFY
Sbjct: 61  YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V +GKLSCQLYQRS DVFLG+PFNIASY+LL  M+A       G+F+ T GD HLY+NH 
Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHM 180

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           EQ  LQLSR PR LP+++I      L  +R++DF +  Y+PH  I A V++
Sbjct: 181 EQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 231


>gi|311112042|ref|YP_003983264.1| thymidylate synthase [Rothia dentocariosa ATCC 17931]
 gi|310943536|gb|ADP39830.1| thymidylate synthase [Rothia dentocariosa ATCC 17931]
          Length = 302

 Score =  305 bits (780), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 149/281 (53%), Positives = 189/281 (67%), Gaps = 17/281 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           + + LD  R  I   + R DRTG GT   FG QMRFDL   FPL+TTK+VH+KSV  ELL
Sbjct: 22  LREILDENRDAIAADAQRADRTGTGTFGVFGRQMRFDLRDSFPLITTKRVHFKSVAVELL 81

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG SN+ +L   GV+IWDEWAD++G+LGP+YGVQWRSWP  DG  IDQI+ +++SL+
Sbjct: 82  WFLRGSSNIRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVIESLK 141

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVFLGIP 175
            +P SRRHIVSAWN A +D+MALPPCH +FQFYV        +LSCQLYQRS D+FLG+P
Sbjct: 142 TNPSSRRHIVSAWNPAEVDEMALPPCHAMFQFYVHERPDGVKELSCQLYQRSADMFLGVP 201

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SRSPR-------- 225
           FNIASY+LLT ++A  +G + GEFI T GD H+Y+NH EQ   QL     P         
Sbjct: 202 FNIASYALLTYLIAHEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGNDPEGNPYPPRE 261

Query: 226 --TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               P+++I      +  + YEDF L  Y+ H  I A ++V
Sbjct: 262 PYPYPKLVIKTKKPSVFDYEYEDFELVDYKHHPGISAPIAV 302


>gi|289435221|ref|YP_003465093.1| hypothetical protein lse_1858 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171465|emb|CBH28009.1| thyA [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 314

 Score =  304 bits (779), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 149/314 (47%), Positives = 192/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L  GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 ESFKIRILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G   GEF+HT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P A+I A +SV
Sbjct: 301 GYNPDASIKAPISV 314


>gi|294790621|ref|ZP_06755779.1| thymidylate synthase [Scardovia inopinata F0304]
 gi|294458518|gb|EFG26871.1| thymidylate synthase [Scardovia inopinata F0304]
          Length = 290

 Score =  304 bits (779), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 148/265 (55%), Positives = 187/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R +++ GS + DRTG GT S FG QMRF+L   FPLLTTK V ++ + +ELLWFL
Sbjct: 27  YEDLVRLILETGSLKSDRTGTGTISLFGRQMRFNLEDSFPLLTTKTVFFRGIAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  + V IWDEWAD DG LGP+YGVQWRSWP    D     IDQIS+++  +
Sbjct: 87  KGSSNVRWLQENRVHIWDEWADADGNLGPVYGVQWRSWPAPTADNPNRTIDQISTVLNLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNQPDSRRMIVSAWNPAEVENMALPPCHTLFQFYVADGKLSCQLYQRSADMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT M+A     + GEF+ T GD H+Y+NH +Q   QLSR P   PQ+ I+     +
Sbjct: 207 SYSLLTAMMAQQADLKPGEFVWTGGDCHIYDNHVDQVLEQLSRQPYPYPQLKID-KADTI 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF + +Y+ H  I A V+V
Sbjct: 266 FDYKYEDFHILNYQHHPKITAPVAV 290


>gi|200003972|ref|YP_002221554.1| putatitve thymidylate synthase [Bacteroides phage B40-8]
 gi|198209669|gb|ACH81952.1| putatitve thymidylate synthase [Bacteroides phage B40-8]
          Length = 265

 Score =  304 bits (779), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 144/265 (54%), Positives = 182/265 (68%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+  + +G  R DRTG GT S FG Q  +DL  GFPL+TTKKV  K ++HELL
Sbjct: 1   MKQYLDLLKETLNYGEKRSDRTGTGTISLFGLQRSYDLRDGFPLVTTKKVFTKGIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L+GD+N+ YL+ +GV IWD+WA   G+LG IYG QWR W       +DQI S++  ++
Sbjct: 61  WMLKGDTNIKYLNENGVHIWDDWAKPSGDLGRIYGKQWRDWRINSKMKVDQIDSVIDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIA 179
            +P SRR IVSAWNV  I  MALPPCHC FQFYV ++G L  +LYQRS D+FLG+PFNIA
Sbjct: 121 FNPESRRLIVSAWNVGEIHMMALPPCHCFFQFYVSESGYLDLKLYQRSADLFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYS+L  M A V G +   FIHT+GD H+Y NH EQ   QLSR P  LP++ +NPN+ ++
Sbjct: 181 SYSILLSMAAQVCGLKPRRFIHTIGDGHIYLNHVEQVKEQLSREPFALPKLELNPNVRNI 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F+YED  +  Y  H AI   V+V
Sbjct: 241 FDFKYEDIKIVDYNCHPAIKGDVAV 265


>gi|229818169|ref|ZP_04448451.1| hypothetical protein BIFANG_03464 [Bifidobacterium angulatum DSM
           20098]
 gi|229784420|gb|EEP20534.1| hypothetical protein BIFANG_03464 [Bifidobacterium angulatum DSM
           20098]
          Length = 266

 Score =  304 bits (779), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R +   G+ + DRTG GT S FG QMRFDL + FPLLTTK V +K + +ELLWFL
Sbjct: 3   YEDLVRKIFAEGTLKSDRTGTGTISLFGQQMRFDLGEYFPLLTTKTVFFKGLAYELLWFL 62

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP---DYDGN-VIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP     D N  IDQIS+++  +
Sbjct: 63  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPQDPNRTIDQISNVLDLI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 123 KNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G + GEF+ T GD H+Y+NH EQ   QL R P   PQ+ I+     L
Sbjct: 183 SYSLLTLMMAQQAGLEPGEFVWTGGDCHIYDNHVEQFIEQLGREPYPYPQIQIDKE-PSL 241

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 242 FDYKYEDFHILGYQHHPTIKAPVAV 266


>gi|213692995|ref|YP_002323581.1| Thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213524456|gb|ACJ53203.1| Thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320459175|dbj|BAJ69796.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 290

 Score =  304 bits (778), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP    +     IDQI +++  +
Sbjct: 87  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIFNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P + I      L
Sbjct: 207 SYSLLTMMMAQQTGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEIR-KADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290


>gi|225350958|ref|ZP_03741981.1| hypothetical protein BIFPSEUDO_02537 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158414|gb|EEG71656.1| hypothetical protein BIFPSEUDO_02537 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 303

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/265 (56%), Positives = 186/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL
Sbjct: 40  YEDLVRKILTEGTLKSDRTGTGTVSLFGQQMRFDLSEYFPLLTTKTVFFKGLAYELLWFL 99

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L    V IWDEWAD++G+LGP+YG QWRSWP    D     IDQIS+++  +
Sbjct: 100 KGSTNVRWLQERNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLV 159

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
              P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 160 ENHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 219

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G Q GEF+ T GD H+Y+NH +Q   QLSR P   PQ+ IN     L
Sbjct: 220 SYSLLTLMIAQQAGLQPGEFVWTGGDCHVYDNHIDQVLEQLSRDPYPYPQIRIN-KADSL 278

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y+ H  I A V+V
Sbjct: 279 FDYDYSDFEIVGYQHHPTIKAPVAV 303


>gi|329895892|ref|ZP_08271220.1| Thymidylate synthase [gamma proteobacterium IMCC3088]
 gi|328922110|gb|EGG29469.1| Thymidylate synthase [gamma proteobacterium IMCC3088]
          Length = 277

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 145/277 (52%), Positives = 185/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G D+ DRTG GTRS F  Q R DLS+GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKVYLDLLRDIMAHGVDKSDRTGTGTRSVFARQFRHDLSEGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N ++L  +GVSIWDEWA ++G+LGPIYG QWRSWP  DG  I+QI  ++  L+
Sbjct: 61  WFLRGDTNTAWLRENGVSIWDEWATEEGDLGPIYGAQWRSWPTADGGAINQIDYVIDCLK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR +   WNV  +              KMALPPCH L+QFYV NG+LS QLY RS
Sbjct: 121 HKPDSRRILFHGWNVEYLPDETLSPQENVRQGKMALPPCHLLYQFYVANGRLSAQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+P+N+AS +LLT ML      + GE I + GD H+Y+NHFEQ + QL R PR L
Sbjct: 181 SDSFLGLPYNLASLALLTHMLCQQCELEPGEVIISTGDSHIYSNHFEQVETQLEREPRAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  + ++DF L  YEPHA I   V++
Sbjct: 241 PTLRIKRKPESIYDYCFDDFELVGYEPHAHIAGAVAI 277


>gi|126730946|ref|ZP_01746755.1| thymidylate synthase [Sagittula stellata E-37]
 gi|126708662|gb|EBA07719.1| thymidylate synthase [Sagittula stellata E-37]
          Length = 263

 Score =  303 bits (777), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 154/264 (58%), Positives = 195/264 (73%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD LR V+K G+D  DRTG GTRS FG Q R+ L+ GFPL+TTKK+H +S+VHELL
Sbjct: 1   MQQYLDALRTVLKEGTDTTDRTGTGTRSHFGLQCRYPLADGFPLVTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR WP   G  IDQI++++  +R
Sbjct: 61  WFLSGDTNIGYLKDNGVSIWDEWADENGDLGPVYGHQWRHWPSRKGE-IDQIATLLDMIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A +  MALPPCH L+Q  +  GKL  QLYQRS D+FLG+PFNIAS
Sbjct: 120 TAPDSRRLIVSAWNPADVPDMALPPCHTLWQVRIAGGKLHLQLYQRSADMFLGVPFNIAS 179

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G++ G+FIHT+GD H+Y+NH +Q  LQLSR+PR LP +     + DL 
Sbjct: 180 YALLQHMIAHVTGYEPGDFIHTMGDAHIYSNHMDQVALQLSRTPRPLPTLRFTREVTDLF 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRY+DF   +Y+P   I A V+V
Sbjct: 240 DFRYDDFAFDNYDPAPGIKAPVAV 263


>gi|46190148|ref|ZP_00206347.1| COG0207: Thymidylate synthase [Bifidobacterium longum DJO10A]
 gi|189440651|ref|YP_001955732.1| thymidylate synthase [Bifidobacterium longum DJO10A]
 gi|296454779|ref|YP_003661923.1| Thymidylate synthase [Bifidobacterium longum subsp. longum JDM301]
 gi|312133956|ref|YP_004001295.1| thya [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482133|ref|ZP_07941157.1| thymidylate synthase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322691787|ref|YP_004221357.1| thymidylate synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|189429086|gb|ACD99234.1| Thymidylate synthase [Bifidobacterium longum DJO10A]
 gi|291516397|emb|CBK70013.1| thymidylate synthase [Bifidobacterium longum subsp. longum F8]
 gi|296184211|gb|ADH01093.1| Thymidylate synthase [Bifidobacterium longum subsp. longum JDM301]
 gi|311773253|gb|ADQ02741.1| ThyA [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916492|gb|EFV37890.1| thymidylate synthase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456643|dbj|BAJ67265.1| thymidylate synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 290

 Score =  303 bits (777), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP    +     IDQIS+++  +
Sbjct: 87  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++KMALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADDKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P + I      L
Sbjct: 207 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEIR-KADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290


>gi|197294226|ref|YP_001798767.1| thymidylate synthase [Candidatus Phytoplasma australiense]
 gi|171853553|emb|CAM11419.1| Thymidylate synthase [Candidatus Phytoplasma australiense]
          Length = 288

 Score =  303 bits (777), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/293 (49%), Positives = 195/293 (66%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL R ++K G ++ DRT  GT+S FGYQMRF+L  GFPLLTTKK+++K+++HELL
Sbjct: 1   MKTYLDLCRFILKKGFNKEDRTKTGTKSVFGYQMRFNLQDGFPLLTTKKMYFKAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WFL+GD+N+SYL ++ V+IW++W                             A   G LG
Sbjct: 61  WFLKGDTNISYLVKNNVNIWNDWPYQKYQKSPHFKNETMEEFIQKIKKDKAFAGLHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR     D N  DQI  ++  ++ +P SRR I+S+WN   + +M LPPCH L Q
Sbjct: 121 PVYGKQWR-----DFNGFDQIKFLISEIKNNPDSRRLILSSWNPEQLHQMVLPPCHILMQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV  GKLS QLYQRSGDVFLG+PFNIASY+LL +M+A V   + GEFIHTLGD H+Y+N
Sbjct: 176 FYVLEGKLSLQLYQRSGDVFLGVPFNIASYALLLLMVAQVTNLEVGEFIHTLGDAHIYHN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H  Q  +Q+ R+P+ LPQMI+NP+I D+  F +EDFTL++Y     +   +++
Sbjct: 236 HLNQIKIQIQRTPKKLPQMILNPHIKDIDGFSFEDFTLKNYFCDGTLKGDIAI 288


>gi|323490213|ref|ZP_08095431.1| thymidylate synthase [Planococcus donghaensis MPA1U2]
 gi|323396142|gb|EGA88970.1| thymidylate synthase [Planococcus donghaensis MPA1U2]
          Length = 314

 Score =  303 bits (777), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/314 (45%), Positives = 190/314 (60%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL  H++  G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK  ++ +V ELL
Sbjct: 1   MKQYLDLCEHILHNGAKKEDRTGTGTLSVFGHQMRFDLTQGFPLMTTKKTAFRLIVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WF++GD+NV  L +    IWDEWA                                    
Sbjct: 61  WFIKGDTNVRALLQDNNHIWDEWAFAQWVESDEYTGPDMTDFGRRAQKDPEFAELYKQQM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K G+LGP+YG QWRSW   +G  IDQ+ ++++S++ +P SRRH+V
Sbjct: 121 QIFQQKVMDNPVFASKYGDLGPVYGKQWRSWATTEGGTIDQLKNVIESIKKNPDSRRHLV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           +AWN   ID MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A 
Sbjct: 181 TAWNPEFIDDMALPPCHIMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
               + G+F+HT GD HLY+NH  Q   QL+R P+ LP + IN  +  +      D T+ 
Sbjct: 241 ECKLEVGDFVHTTGDTHLYSNHLSQVQEQLTREPKPLPTLHINEEVESIFDLTLADITIE 300

Query: 251 SYEPHAAILAKVSV 264
            Y+PH  I A V+V
Sbjct: 301 GYDPHPRIKAPVAV 314


>gi|294155965|ref|YP_003560349.1| thymidylate synthase [Mycoplasma crocodyli MP145]
 gi|291599860|gb|ADE19356.1| thymidylate synthase [Mycoplasma crocodyli MP145]
          Length = 289

 Score =  303 bits (776), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 151/294 (51%), Positives = 192/294 (65%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL+ V+  G  RRDRTG GT   FG Q R+DL KGFPLLTTKK+ WKS+V ELL
Sbjct: 1   MTQYLKLLKTVLNTGMVRRDRTGTGTIGVFGTQTRYDLRKGFPLLTTKKMAWKSIVVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WFL+G++N+ YL    V+IW+EW                             A K G LG
Sbjct: 61  WFLKGETNIKYLVDRNVNIWNEWPYEIYKRSTDFQGETIEEFINKIKNDNEFAIKHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR   D++G  +DQI  ++  LR  P+SRR +VSAWN   +DKMALPPCH LFQ
Sbjct: 121 PVYGRQWR---DFNG--VDQIKYVINELRTKPFSRRILVSAWNPEEVDKMALPPCHALFQ 175

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           FYV  N +LS QLYQRSGD+FLG+PFNIASY+LL  M+A V   + GEFIHT+GD H+Y+
Sbjct: 176 FYVSSNDELSLQLYQRSGDLFLGVPFNIASYALLLHMVAQVTNLRVGEFIHTIGDAHIYS 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH +Q   QL+R P  LP +I+N  + ++  F +ED  L+ Y+ H+ I A+VSV
Sbjct: 236 NHVDQVTEQLTRRPFKLPTIILNKKVKEIFDFEFEDIELKDYKSHSRIKAEVSV 289


>gi|319935855|ref|ZP_08010281.1| thymidylate synthase [Coprobacillus sp. 29_1]
 gi|319809122|gb|EFW05603.1| thymidylate synthase [Coprobacillus sp. 29_1]
          Length = 295

 Score =  303 bits (775), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 144/298 (48%), Positives = 194/298 (65%), Gaps = 37/298 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L +H+++ G DR DRTG GTRS FGYQ R+DL +GFPLLTTKK+  + +  ELL
Sbjct: 1   MKQYLELCKHILENGEDRDDRTGTGTRSVFGYQTRYDLREGFPLLTTKKMFLRPIAEELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW---------------------------AD-----KDG 88
           WF++GD+N+ YL    V IW+EW                           AD     K G
Sbjct: 61  WFIKGDTNIKYLVDRNVRIWNEWPYEIFKKSEDFHGETLEEFVEKIKELSADDPFVIKYG 120

Query: 89  ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           ELGP+YG QWR   +++   IDQ+S +V SL+ +PYSRRHI+ AWN A +D+MALPPCH 
Sbjct: 121 ELGPVYGRQWR---NFNNEGIDQVSKLVDSLKNNPYSRRHIICAWNPAEVDEMALPPCHS 177

Query: 149 LFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206
             QFYV N +  LSCQLYQRS D FLG+PFNIASY+L T MLA V G++  EFIHT+GD 
Sbjct: 178 FLQFYVSNDQKYLSCQLYQRSADTFLGVPFNIASYALFTAMLAQVCGYEAKEFIHTIGDA 237

Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H+Y +HF+    Q+SR P +L Q+++N ++  +  F  +D  + +Y+ +  ++ KVSV
Sbjct: 238 HIYKDHFDVVKEQMSREPLSLCQLVLNKDVKSIFDFTIDDIKIENYQSYGKLVGKVSV 295


>gi|23466213|ref|NP_696816.1| thymidylate synthase [Bifidobacterium longum NCC2705]
 gi|239621560|ref|ZP_04664591.1| thymidylate synthase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|62901377|sp|Q8G3T9|TYSY_BIFLO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|23326956|gb|AAN25452.1| thymidylate synthase [Bifidobacterium longum NCC2705]
 gi|239515435|gb|EEQ55302.1| thymidylate synthase [Bifidobacterium longum subsp. infantis CCUG
           52486]
          Length = 266

 Score =  303 bits (775), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL
Sbjct: 3   YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 62

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP    +     IDQIS+++  +
Sbjct: 63  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++KMALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIA
Sbjct: 123 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADDKLSCQLYQRSCDMFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P + I      L
Sbjct: 183 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEIR-KADSL 241

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 242 FDYQYEDFKVVGYQHHPTIKAPVAV 266


>gi|154486823|ref|ZP_02028230.1| hypothetical protein BIFADO_00651 [Bifidobacterium adolescentis
           L2-32]
 gi|154084686|gb|EDN83731.1| hypothetical protein BIFADO_00651 [Bifidobacterium adolescentis
           L2-32]
          Length = 266

 Score =  303 bits (775), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/265 (55%), Positives = 188/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRF+L + FPLLTTK V +K + +ELLWFL
Sbjct: 3   YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFNLKESFPLLTTKTVFFKGLAYELLWFL 62

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L  H V IWDEWAD++G+LGP+YG QWRSWP    D     IDQIS+++  +
Sbjct: 63  KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 123 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G + GEF+ T GD H+Y+NH +Q   QLSR+P   PQ+ I      L
Sbjct: 183 SYSLLTLMMAQQTGLEPGEFVWTGGDCHVYDNHIDQVLEQLSRTPYPYPQIRIR-KADSL 241

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF + +Y+ H  I A V+V
Sbjct: 242 FDYDYSDFEIVNYQHHPTIKAPVAV 266


>gi|119025406|ref|YP_909251.1| thymidylate synthase [Bifidobacterium adolescentis ATCC 15703]
 gi|118764990|dbj|BAF39169.1| thymidylate synthase [Bifidobacterium adolescentis ATCC 15703]
          Length = 266

 Score =  302 bits (773), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 146/265 (55%), Positives = 187/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRF+L   FPLLTTK V +K + +ELLWFL
Sbjct: 3   YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFNLKDSFPLLTTKTVFFKGLAYELLWFL 62

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L  H V IWDEWAD++G+LGP+YG QWRSWP    D     IDQIS+++  +
Sbjct: 63  KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 123 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDIFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G + GEF+ T GD H+Y+NH +Q   QLSR+P   PQ+ I      L
Sbjct: 183 SYSLLTLMMAQQTGLEPGEFVWTGGDCHVYDNHIDQVLEQLSRTPYPYPQIRIR-KADSL 241

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF + +Y+ H  I A V+V
Sbjct: 242 FDYDYSDFEIVNYQHHPTIKAPVAV 266


>gi|254460113|ref|ZP_05073529.1| thymidylate synthase [Rhodobacterales bacterium HTCC2083]
 gi|206676702|gb|EDZ41189.1| thymidylate synthase [Rhodobacteraceae bacterium HTCC2083]
          Length = 250

 Score =  302 bits (773), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 140/246 (56%), Positives = 180/246 (73%), Gaps = 1/246 (0%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           DRTG GT S FG Q R+ ++ GFPL+TTKK+H KS++HELLWFL GD+N+ YL  +GVSI
Sbjct: 5   DRTGTGTTSHFGLQCRYPMADGFPLVTTKKLHLKSIIHELLWFLAGDTNIKYLKDNGVSI 64

Query: 80  WDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           WDEWAD++G+LGP+YG QWR WP   D   IDQI+ +V++++  P SRR IVSAWN A +
Sbjct: 65  WDEWADENGDLGPVYGSQWRRWPSGTDMGPIDQITDLVEAIKKTPDSRRLIVSAWNPAEV 124

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
             MALPPCH L+Q  +  GKL  QLYQRS D+FLG+PFNIASY+LL  MLA V G + G+
Sbjct: 125 PDMALPPCHTLWQVRIAGGKLHLQLYQRSADMFLGVPFNIASYALLLHMLAHVTGHEPGD 184

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           FIH++GD H+Y+NH EQ   QL+RSP+ L Q+ I   +  L  F Y+DF +  Y+P A I
Sbjct: 185 FIHSIGDAHIYSNHMEQVQTQLARSPKALSQLKIKRQVSSLFDFTYDDFEIIGYDPDAGI 244

Query: 259 LAKVSV 264
            A V+V
Sbjct: 245 KAPVAV 250


>gi|313140945|ref|ZP_07803138.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133455|gb|EFR51072.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171]
          Length = 260

 Score =  301 bits (772), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 148/261 (56%), Positives = 188/261 (72%), Gaps = 5/261 (1%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           +R ++  G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL+G S
Sbjct: 1   MRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFLKGSS 60

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP---DYDGN-VIDQISSIVQSLRADP 123
           NV +L  H V IWD+WAD++G+LGP+YGVQWRSWP     D N  IDQI +++  +R  P
Sbjct: 61  NVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTSEDPNRTIDQIGNVLDLIRNHP 120

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIASYSL
Sbjct: 121 DSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIASYSL 180

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LTMM+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   P++ I      L  ++
Sbjct: 181 LTMMIAQQTGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEIR-KADSLFDYQ 239

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YEDFT+  Y  H  I A V+V
Sbjct: 240 YEDFTIVDYRHHPTIKAPVAV 260


>gi|313637263|gb|EFS02769.1| thymidylate synthase [Listeria seeligeri FSL S4-171]
          Length = 314

 Score =  301 bits (772), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 148/314 (47%), Positives = 190/314 (60%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L  GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 ESFKTHILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L   ++A 
Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALXXXLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G   GEF+HT+GD HLYNNH EQ   QLSR+P  LP++I++     +  F   D +L 
Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLILSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P A+I A +SV
Sbjct: 301 GYNPDASIKAPISV 314


>gi|90415501|ref|ZP_01223435.1| thymidylate synthase [marine gamma proteobacterium HTCC2207]
 gi|90332824|gb|EAS47994.1| thymidylate synthase [marine gamma proteobacterium HTCC2207]
          Length = 301

 Score =  301 bits (771), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 148/306 (48%), Positives = 200/306 (65%), Gaps = 47/306 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H+   G  + DRT  GT+S FG+QMRFDLS+GFPL+TTKKVH KS++HELL
Sbjct: 1   MKQYLDLIKHIRDHGVKKEDRTATGTQSIFGHQMRFDLSQGFPLVTTKKVHLKSILHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------------------------------- 83
           WF+RGD+N+ YL  +GV IW++W                                     
Sbjct: 61  WFIRGDTNIRYLVENGVGIWNDWPYQSWLRETDQEADFPMYSPEWKAKMKEFIQRIKDDD 120

Query: 84  --ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN---VALI 138
             A + G+LGP+YG QWR   +++G  +DQ++ +V+ ++++P SRR IVSAWN   + ++
Sbjct: 121 EFAQQYGDLGPVYGHQWR---NFEG--VDQLAQVVEDIKSNPDSRRLIVSAWNPKDIPVM 175

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            K  LPPCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIASY++LT+M+A V G + G+
Sbjct: 176 VKSGLPPCHSLFQFYVTEGRLSCQLYQRSADVFLGVPFNIASYAILTLMIAQVTGLEPGD 235

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           F+HT GD HLY+NH +Q +  LSR    LP + INP + +L  F +EDF L  Y+ H  I
Sbjct: 236 FVHTFGDAHLYSNHMDQVEELLSRETYPLPTLAINPAVDNLFDFVFEDFELLDYQSHGPI 295

Query: 259 LAKVSV 264
            A V+V
Sbjct: 296 SAPVAV 301


>gi|254474624|ref|ZP_05088010.1| thymidylate synthase [Ruegeria sp. R11]
 gi|214028867|gb|EEB69702.1| thymidylate synthase [Ruegeria sp. R11]
          Length = 277

 Score =  301 bits (770), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 141/277 (50%), Positives = 189/277 (68%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY + L  ++  G    DRTG GT S FG Q R+ L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MRQYHEALEQILTHGEASSDRTGTGTISYFGMQTRYPLADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P              Y   
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRHFPRLELAEGTTGDEPLYRAG 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQI+ +V+ +   P SRR IVSAWN A +  MALPPCH L+Q  V   K+  QLYQRS
Sbjct: 121 SVDQIADLVRMIETSPDSRRLIVSAWNPADVPDMALPPCHTLWQVRVQGRKMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LL  MLA V G++ G+F+HT+GD H+Y+NH +Q  LQLSR+P+ L
Sbjct: 181 ADMFLGVPFNIASYALLLKMLAHVTGYEAGDFVHTIGDAHIYSNHMDQVKLQLSRTPKPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I  ++  +  F YEDF + +Y+P   I A V+V
Sbjct: 241 PELHIKRDVPSIFDFTYEDFEVVNYDPDPVIKAPVAV 277


>gi|5565933|gb|AAD45276.1|AF152114_4 thymidylate synthase [Mycoplasma gallisepticum]
          Length = 289

 Score =  301 bits (770), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 145/294 (49%), Positives = 193/294 (65%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V+  G  ++DRT  GT S FG Q R+DL +GFPLLTTKK+ WK++ HELL
Sbjct: 1   MKTYLDLLEKVMTKGEVKKDRTNTGTISYFGTQSRYDLREGFPLLTTKKMAWKAICHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WFL+GD+N+ YL  H V+IW+EW                             A + G+LG
Sbjct: 61  WFLKGDTNMKYLVDHNVNIWNEWPYEAFKKSNDFKGESLQDFVEKIKTDNQFAQQYGKLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR     D N +DQI  ++  ++ +P+SRR IVSAWN   I +MALPPCH  FQ
Sbjct: 121 PVYGKQWR-----DFNGVDQIEWVINEIKTNPFSRRLIVSAWNPGEIKEMALPPCHSFFQ 175

Query: 152 FYVDNG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           F+V+   ++S QLYQRSGD+FLG+PFNIASYSLL +M+A V   +  EFIHT+GD H+Y+
Sbjct: 176 FFVNEKYEISLQLYQRSGDLFLGVPFNIASYSLLLLMVAQVTWLKPAEFIHTIGDTHIYS 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH EQ  +QL R P+ LP++ +NP+I ++  FR+ED +L +YE H  I  KV+V
Sbjct: 236 NHLEQVKIQLQREPKKLPKVTLNPDIKNIFDFRFEDISLENYEHHDPIKGKVAV 289


>gi|32491069|ref|NP_871323.1| thymidylate synthase [Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis]
 gi|30173417|sp|Q8D2N4|TYSY_WIGBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|25166276|dbj|BAC24466.1| thyA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 264

 Score =  301 bits (770), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 142/264 (53%), Positives = 188/264 (71%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YLDLL  ++K G  + DRT  GT S FGYQ+R +L++GFPLLTTK  H+KS+V+ELL
Sbjct: 1   MKEYLDLLNLILKNGYPKIDRTKTGTLSMFGYQIRINLNEGFPLLTTKYCHFKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+S+L ++ +SIW++WADK+G LGPIYG QWR+W D   N IDQI   +  L+
Sbjct: 61  WFLRGDTNISFLKKNNISIWNKWADKNGNLGPIYGKQWRAWEDKKNNTIDQIEIALNKLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  +D M++PPCH LFQ YV N KLSCQ+YQRS D+FLG+PFNI S
Sbjct: 121 KEPSSRRILVSSWNVGELDLMSIPPCHVLFQLYVINNKLSCQVYQRSCDIFLGLPFNIGS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT + A+       + I T GD+HLY NH  QA LQL+RSP  LP++ I     +L 
Sbjct: 181 YALLTHIFANQCDLLVEDLIWTGGDIHLYKNHLNQAKLQLTRSPLPLPKIFIKKKPKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           ++ + DF L  Y  H  I A +S+
Sbjct: 241 NYAFNDFLLIDYNHHPKIKAPISI 264


>gi|23099195|ref|NP_692661.1| thymidylate synthase [Oceanobacillus iheyensis HTE831]
 gi|33301729|sp|Q8EQG0|TYSY_OCEIH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|22777423|dbj|BAC13696.1| thymidylate synthase [Oceanobacillus iheyensis HTE831]
          Length = 317

 Score =  300 bits (769), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + + K G  R DRT  GT S FG+Q+RFDL+KGFPLLTTK+V ++ V  ELLWF+
Sbjct: 7   YLDLCKQIFKTGEQRGDRTNTGTHSIFGHQIRFDLNKGFPLLTTKRVPFRLVASELLWFI 66

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL +H  +IW+EWA                                       
Sbjct: 67  KGDTNIRYLLKHNNNIWNEWAFEKWVNSADYQGPDMANFGLRSQKDENFNKQYQEQMELF 126

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      DK G+LG +YG QWR+W       IDQ+  ++ S++ +P SRRHIVSAW
Sbjct: 127 KTRILEDDSFADKYGDLGSVYGKQWRNWKTTQNETIDQLKDVIHSIKTNPNSRRHIVSAW 186

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  MALPPCH LFQFYV NGKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 187 NPEDIPTMALPPCHTLFQFYVSNGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHECG 246

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + G+F+HT GD H+Y+NH EQ + QL R  R  PQ+IIN +   +     +D  + +Y 
Sbjct: 247 LEVGDFVHTFGDAHIYSNHVEQVETQLEREIRDFPQLIINKDKNSIFEMDLDDLVIENYN 306

Query: 254 PHAAILAKVSV 264
           PH +I A ++V
Sbjct: 307 PHPSIKAPIAV 317


>gi|260583621|ref|ZP_05851369.1| thymidylate synthase [Granulicatella elegans ATCC 700633]
 gi|260158247|gb|EEW93315.1| thymidylate synthase [Granulicatella elegans ATCC 700633]
          Length = 314

 Score =  300 bits (769), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 149/314 (47%), Positives = 188/314 (59%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  + + G ++ DRTG GT+S FGYQMRFDL+KGFP+LTTK+V +  +  ELL
Sbjct: 1   MKQYLELLEKIKQEGIEKSDRTGTGTKSIFGYQMRFDLTKGFPILTTKRVPFGLIKSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WF++GD+N+ YL +H   IWDEWA                                    
Sbjct: 61  WFIKGDTNIRYLLQHNNHIWDEWAFKRYVESPDYTGEDMTDFGRRSLQDPVFKEVYEKEL 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ L+  P SRR +V
Sbjct: 121 ETFCQRILNEDDFAAKYGELGNIYGSQWRHWKTTQGETIDQLAQVIEMLKTSPDSRRLLV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A+
Sbjct: 181 SAWNPEDVPSMALPPCHTMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAN 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + GEF+HTLGD HLY NH EQ DLQLSR P  LPQ+++      L      D  L 
Sbjct: 241 EVGLEVGEFVHTLGDAHLYLNHLEQVDLQLSREPFELPQLVLKHPEKSLYDLEVADVVLE 300

Query: 251 SYEPHAAILAKVSV 264
            YE H  I A ++V
Sbjct: 301 GYECHPTIKAPIAV 314


>gi|296129374|ref|YP_003636624.1| thymidylate synthase [Cellulomonas flavigena DSM 20109]
 gi|296021189|gb|ADG74425.1| thymidylate synthase [Cellulomonas flavigena DSM 20109]
          Length = 278

 Score =  300 bits (769), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 140/261 (53%), Positives = 184/261 (70%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+Q+R+DL  GFPL+TTK+V ++ V  EL WFL
Sbjct: 19  YEDLLRLVLATGTPKSDRTGTGTRSVFGHQLRYDLRAGFPLVTTKRVFFRGVAEELFWFL 78

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SN++ L    V IWDEWAD+ GELGP+YGVQWRSWP  DG  +DQ+  ++  LRA+P
Sbjct: 79  RGESNIASLLERNVHIWDEWADEHGELGPVYGVQWRSWPTPDGGHVDQLERLLGELRANP 138

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRH+VSAWNVA +D+MAL PCH  FQ YV +G+LS Q+YQRS D+FLG+PFN+ASY+L
Sbjct: 139 DSRRHLVSAWNVAELDRMALVPCHAFFQLYVADGRLSLQVYQRSADLFLGVPFNLASYAL 198

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A  +G + G+ + T GD H+Y+NH EQ   QLSR P   P + +      L  + 
Sbjct: 199 LTHMIAQQVGLEVGDLVWTGGDCHIYDNHVEQVREQLSREPYPYPTLELR-EAPSLFDYA 257

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y  H  I A V+V
Sbjct: 258 WDDVEVVGYRHHPTIAAPVAV 278


>gi|254281872|ref|ZP_04956840.1| thymidylate synthase [gamma proteobacterium NOR51-B]
 gi|219678075|gb|EED34424.1| thymidylate synthase [gamma proteobacterium NOR51-B]
          Length = 277

 Score =  300 bits (768), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 147/277 (53%), Positives = 184/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LLR +   G DR DRTG GTRS FG Q+RFDL +GFPLLTTKK+H+KSVV+EL+
Sbjct: 1   MRAYLELLRDIRDHGVDRGDRTGTGTRSVFGRQLRFDLREGFPLLTTKKIHFKSVVNELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  +L  +GVSIWDEWA +DG+LGP+YG QW +WP  DG  I+QI  ++  LR
Sbjct: 61  WFLSGDTNTRWLKENGVSIWDEWATEDGDLGPLYGAQWHAWPTRDGGSINQIDYVLDCLR 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR +  AWNV  +              +MALPPCH L+QFYV NG LS QLY RS
Sbjct: 121 NRPESRRILFHAWNVEYLPDESMTPQDNVAAGRMALPPCHLLYQFYVANGALSAQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIAS +LLT MLA        E I +LGD H+Y+NH  Q + QL+R P + 
Sbjct: 181 SDVFLGLPFNIASLALLTHMLAQQADLSVAEVIVSLGDAHIYSNHQRQVETQLAREPGSA 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  +R+EDF+L  Y+P   I A V+V
Sbjct: 241 PTLAIGRRPDTIYDYRFEDFSLHDYDPQPPIPAPVAV 277


>gi|167756640|ref|ZP_02428767.1| hypothetical protein CLORAM_02177 [Clostridium ramosum DSM 1402]
 gi|167702815|gb|EDS17394.1| hypothetical protein CLORAM_02177 [Clostridium ramosum DSM 1402]
          Length = 292

 Score =  300 bits (767), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 138/295 (46%), Positives = 191/295 (64%), Gaps = 34/295 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD+ ++V++ G +R DRTG GTRS FGYQ R+DL  GFPL+TTKK+  + +  ELL
Sbjct: 1   MKQYLDMCKYVLENGENREDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFLRPIAEELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL    V IW+EW                             A K G+LG
Sbjct: 61  WFIKGDTNIKYLVDRNVKIWNEWPYEDFKKSPDFNGETIEEFVEKIKTDDEFAKKHGDLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR + +Y+G  +DQ++ +V SL  +P+SRRHI+ AWN A +D MALPPCH   Q
Sbjct: 121 PVYGAQWRDF-NYEG--VDQLAKLVDSLTNNPFSRRHIICAWNPAQVDNMALPPCHAFLQ 177

Query: 152 FYV--DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           FYV  D   LSCQLYQRS D+FLG+PFNIASY+L+T MLA   G++  EFIHT+GD H+Y
Sbjct: 178 FYVSADKKYLSCQLYQRSADIFLGVPFNIASYALMTEMLARTCGYEAKEFIHTIGDAHIY 237

Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +HFE    Q++R P    ++++NP++  +  ++ ED  +  Y+ H  ++ KVSV
Sbjct: 238 KDHFEVVKQQIAREPLPKCKLVLNPDVKSIFDYKIEDIKIEDYQSHGKLVGKVSV 292


>gi|224283792|ref|ZP_03647114.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171]
          Length = 256

 Score =  300 bits (767), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 147/254 (57%), Positives = 184/254 (72%), Gaps = 5/254 (1%)

Query: 15  GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74
           G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL+G SNV +L  
Sbjct: 4   GTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFLKGSSNVRWLQE 63

Query: 75  HGVSIWDEWADKDGELGPIYGVQWRSWP---DYDGN-VIDQISSIVQSLRADPYSRRHIV 130
           H V IWD+WAD++G+LGP+YGVQWRSWP     D N  IDQI +++  +R  P SRR +V
Sbjct: 64  HNVHIWDDWADENGDLGPVYGVQWRSWPAPTSEDPNRTIDQIGNVLDLIRNHPDSRRMVV 123

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIASYSLLTMM+A 
Sbjct: 124 SAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIASYSLLTMMIAQ 183

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G + GEF+ T GD H+Y+NH +Q   QLSR P   P++ I      L  ++YEDFT+ 
Sbjct: 184 QTGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEIR-KADSLFDYQYEDFTIV 242

Query: 251 SYEPHAAILAKVSV 264
            Y  H  I A V+V
Sbjct: 243 DYRHHPTIKAPVAV 256


>gi|224541512|ref|ZP_03682051.1| hypothetical protein CATMIT_00682 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525549|gb|EEF94654.1| hypothetical protein CATMIT_00682 [Catenibacterium mitsuokai DSM
           15897]
          Length = 286

 Score =  299 bits (766), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 140/289 (48%), Positives = 188/289 (65%), Gaps = 34/289 (11%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           + R++++ G DR DRTG GTRS FGYQ R+DL +GFPLLTTKK++ + +  ELLWF++GD
Sbjct: 1   MCRYILEHGEDRPDRTGTGTRSVFGYQTRYDLREGFPLLTTKKMYLRPIAEELLWFIKGD 60

Query: 67  SNVSYLHRHGVSIWDEW-----------------------------ADKDGELGPIYGVQ 97
           +N+ YL    V IW+EW                             A K G LGP+YG Q
Sbjct: 61  TNIKYLVDRNVKIWNEWPYEDFKKSEDFNGETLEEFVEKIKNDDDFAKKHGNLGPVYGAQ 120

Query: 98  WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
           WR   +++    DQ+  ++ SL+ +P+SRRHI+SAWN + +D+MALPPCH L QFYV + 
Sbjct: 121 WR---NFNNEGTDQLMKLIDSLKNNPFSRRHIISAWNPSQVDEMALPPCHTLMQFYVSSD 177

Query: 158 K--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
           K  LSCQLYQRS D FLG+PFNIASY+LLT MLA V G++  EFIHT+GD H+Y NHF+ 
Sbjct: 178 KKYLSCQLYQRSADTFLGVPFNIASYALLTCMLAQVCGYEPKEFIHTIGDAHIYKNHFDV 237

Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              Q+ R P  LP++++N +I +L  F+ ED  L  Y+ H  +  KVSV
Sbjct: 238 VKTQIEREPLPLPRLVLNKDIDNLFDFKIEDIKLEGYQSHGPLKGKVSV 286


>gi|256961912|ref|ZP_05566083.1| thymidylate synthase [Enterococcus faecalis Merz96]
 gi|257085168|ref|ZP_05579529.1| thymidylate synthase [Enterococcus faecalis Fly1]
 gi|293382980|ref|ZP_06628898.1| thymidylate synthase [Enterococcus faecalis R712]
 gi|293389531|ref|ZP_06633988.1| thymidylate synthase [Enterococcus faecalis S613]
 gi|312907549|ref|ZP_07766540.1| thymidylate synthase [Enterococcus faecalis DAPTO 512]
 gi|312910167|ref|ZP_07769014.1| thymidylate synthase [Enterococcus faecalis DAPTO 516]
 gi|256952408|gb|EEU69040.1| thymidylate synthase [Enterococcus faecalis Merz96]
 gi|256993198|gb|EEU80500.1| thymidylate synthase [Enterococcus faecalis Fly1]
 gi|291079645|gb|EFE17009.1| thymidylate synthase [Enterococcus faecalis R712]
 gi|291081148|gb|EFE18111.1| thymidylate synthase [Enterococcus faecalis S613]
 gi|310626577|gb|EFQ09860.1| thymidylate synthase [Enterococcus faecalis DAPTO 512]
 gi|311289440|gb|EFQ67996.1| thymidylate synthase [Enterococcus faecalis DAPTO 516]
          Length = 315

 Score =  298 bits (764), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDAILNDEEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|257082535|ref|ZP_05576896.1| thymidylate synthase [Enterococcus faecalis E1Sol]
 gi|256990565|gb|EEU77867.1| thymidylate synthase [Enterococcus faecalis E1Sol]
          Length = 315

 Score =  298 bits (764), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LEVGEFVHTLGDAHLYKNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|29376139|ref|NP_815293.1| thymidylate synthase [Enterococcus faecalis V583]
 gi|227518767|ref|ZP_03948816.1| thymidylate synthase [Enterococcus faecalis TX0104]
 gi|227553378|ref|ZP_03983427.1| thymidylate synthase [Enterococcus faecalis HH22]
 gi|229550000|ref|ZP_04438725.1| thymidylate synthase [Enterococcus faecalis ATCC 29200]
 gi|255972782|ref|ZP_05423368.1| thymidylate synthase [Enterococcus faecalis T1]
 gi|256619078|ref|ZP_05475924.1| thymidylate synthase [Enterococcus faecalis ATCC 4200]
 gi|256762514|ref|ZP_05503094.1| thymidylate synthase [Enterococcus faecalis T3]
 gi|256965110|ref|ZP_05569281.1| thymidylate synthase [Enterococcus faecalis HIP11704]
 gi|257089900|ref|ZP_05584261.1| thymidylate synthase [Enterococcus faecalis CH188]
 gi|257416108|ref|ZP_05593102.1| thymidylate synthase [Enterococcus faecalis AR01/DG]
 gi|257419311|ref|ZP_05596305.1| thymidylate synthase [Enterococcus faecalis T11]
 gi|257422604|ref|ZP_05599594.1| thymidylate synthase [Enterococcus faecalis X98]
 gi|307273209|ref|ZP_07554455.1| thymidylate synthase [Enterococcus faecalis TX0855]
 gi|307274946|ref|ZP_07556109.1| thymidylate synthase [Enterococcus faecalis TX2134]
 gi|312900775|ref|ZP_07760072.1| thymidylate synthase [Enterococcus faecalis TX0470]
 gi|312903323|ref|ZP_07762503.1| thymidylate synthase [Enterococcus faecalis TX0635]
 gi|312951509|ref|ZP_07770405.1| thymidylate synthase [Enterococcus faecalis TX0102]
 gi|62901361|sp|Q834R3|TYSY_ENTFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|29343601|gb|AAO81363.1| thymidylate synthase [Enterococcus faecalis V583]
 gi|227073762|gb|EEI11725.1| thymidylate synthase [Enterococcus faecalis TX0104]
 gi|227177483|gb|EEI58455.1| thymidylate synthase [Enterococcus faecalis HH22]
 gi|229304913|gb|EEN70909.1| thymidylate synthase [Enterococcus faecalis ATCC 29200]
 gi|255963800|gb|EET96276.1| thymidylate synthase [Enterococcus faecalis T1]
 gi|256598605|gb|EEU17781.1| thymidylate synthase [Enterococcus faecalis ATCC 4200]
 gi|256683765|gb|EEU23460.1| thymidylate synthase [Enterococcus faecalis T3]
 gi|256955606|gb|EEU72238.1| thymidylate synthase [Enterococcus faecalis HIP11704]
 gi|256998712|gb|EEU85232.1| thymidylate synthase [Enterococcus faecalis CH188]
 gi|257157936|gb|EEU87896.1| thymidylate synthase [Enterococcus faecalis ARO1/DG]
 gi|257161139|gb|EEU91099.1| thymidylate synthase [Enterococcus faecalis T11]
 gi|257164428|gb|EEU94388.1| thymidylate synthase [Enterococcus faecalis X98]
 gi|306508394|gb|EFM77501.1| thymidylate synthase [Enterococcus faecalis TX2134]
 gi|306510194|gb|EFM79218.1| thymidylate synthase [Enterococcus faecalis TX0855]
 gi|310630475|gb|EFQ13758.1| thymidylate synthase [Enterococcus faecalis TX0102]
 gi|310633199|gb|EFQ16482.1| thymidylate synthase [Enterococcus faecalis TX0635]
 gi|311292256|gb|EFQ70812.1| thymidylate synthase [Enterococcus faecalis TX0470]
 gi|315147280|gb|EFT91296.1| thymidylate synthase [Enterococcus faecalis TX4244]
 gi|315150521|gb|EFT94537.1| thymidylate synthase [Enterococcus faecalis TX0012]
 gi|315152468|gb|EFT96484.1| thymidylate synthase [Enterococcus faecalis TX0031]
 gi|315155746|gb|EFT99762.1| thymidylate synthase [Enterococcus faecalis TX0043]
 gi|315158088|gb|EFU02105.1| thymidylate synthase [Enterococcus faecalis TX0312]
 gi|315169020|gb|EFU13037.1| thymidylate synthase [Enterococcus faecalis TX1341]
 gi|315169743|gb|EFU13760.1| thymidylate synthase [Enterococcus faecalis TX1342]
 gi|315172296|gb|EFU16313.1| thymidylate synthase [Enterococcus faecalis TX1346]
 gi|315575852|gb|EFU88043.1| thymidylate synthase [Enterococcus faecalis TX0309B]
 gi|315577691|gb|EFU89882.1| thymidylate synthase [Enterococcus faecalis TX0630]
 gi|315580504|gb|EFU92695.1| thymidylate synthase [Enterococcus faecalis TX0309A]
 gi|327535148|gb|AEA93982.1| thymidylate synthase [Enterococcus faecalis OG1RF]
          Length = 315

 Score =  298 bits (764), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|229545808|ref|ZP_04434533.1| thymidylate synthase [Enterococcus faecalis TX1322]
 gi|256853140|ref|ZP_05558510.1| thymidylate synthase [Enterococcus faecalis T8]
 gi|300861235|ref|ZP_07107322.1| thymidylate synthase [Enterococcus faecalis TUSoD Ef11]
 gi|307291981|ref|ZP_07571850.1| thymidylate synthase [Enterococcus faecalis TX0411]
 gi|229309120|gb|EEN75107.1| thymidylate synthase [Enterococcus faecalis TX1322]
 gi|256711599|gb|EEU26637.1| thymidylate synthase [Enterococcus faecalis T8]
 gi|295112995|emb|CBL31632.1| thymidylate synthase [Enterococcus sp. 7L76]
 gi|300850274|gb|EFK78024.1| thymidylate synthase [Enterococcus faecalis TUSoD Ef11]
 gi|306496979|gb|EFM66527.1| thymidylate synthase [Enterococcus faecalis TX0411]
 gi|315029370|gb|EFT41302.1| thymidylate synthase [Enterococcus faecalis TX4000]
 gi|315145054|gb|EFT89070.1| thymidylate synthase [Enterococcus faecalis TX2141]
 gi|315160429|gb|EFU04446.1| thymidylate synthase [Enterococcus faecalis TX0645]
          Length = 315

 Score =  298 bits (764), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|254515777|ref|ZP_05127837.1| thymidylate synthase [gamma proteobacterium NOR5-3]
 gi|219675499|gb|EED31865.1| thymidylate synthase [gamma proteobacterium NOR5-3]
          Length = 277

 Score =  298 bits (764), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 146/277 (52%), Positives = 182/277 (65%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLR ++  G  + DRTG GT S FG Q R DL+ GFPLLTTKK+H +S+V+EL+
Sbjct: 1   MQQYQDLLRDILDNGVRKEDRTGTGTLSVFGRQFRHDLADGFPLLTTKKLHLRSIVNELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV++L  HGVSIW+EWA   G+LGP+YG QWR+WP  DG  I+QI  ++  L+
Sbjct: 61  WFLNGDTNVAWLQEHGVSIWNEWATDTGDLGPVYGKQWRAWPTKDGGEINQIDYVLDCLK 120

Query: 121 ADPYSRRHIVSAWNV-------------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR +  AWNV             A   +MALPPCH L+QFYV NG+LS QLY RS
Sbjct: 121 NRPDSRRILFHAWNVEYLPDESLSPQENAAAGRMALPPCHLLYQFYVANGRLSAQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFN AS ++L MMLA   G + GE I + GD HLY NH EQ   QLSR PR L
Sbjct: 181 SDTFLGLPFNTASLAVLVMMLAQQTGLEPGEIIISTGDSHLYLNHMEQVREQLSREPRPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +      +  +R+EDF L  Y PH  I A V+V
Sbjct: 241 PKLALLRRPESIYDYRFEDFELSDYNPHPHIPAPVAV 277


>gi|88706383|ref|ZP_01104088.1| Thymidylate synthase [Congregibacter litoralis KT71]
 gi|88699319|gb|EAQ96433.1| Thymidylate synthase [Congregibacter litoralis KT71]
          Length = 277

 Score =  298 bits (764), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 146/277 (52%), Positives = 183/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLR +++ G  + DRTG GT S FG Q R +L+ GFPLLTTKKVH +S+++EL+
Sbjct: 1   MRQYHDLLRDILENGVRKEDRTGTGTLSVFGRQFRHNLADGFPLLTTKKVHLRSIINELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV++L  HGVSIW+EWA + G+LGP+YG QWR+WP  DG  +DQI  ++  LR
Sbjct: 61  WFLNGDTNVAWLQEHGVSIWNEWATETGDLGPVYGKQWRAWPTQDGGEVDQIEYVLDCLR 120

Query: 121 ADPYSRRHIVSAWNV-------------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR +  AWNV             A   +MALPPCH L+QFYV  GKLS QLY RS
Sbjct: 121 HRPDSRRILFHAWNVEYLPDESLSPQENARAGRMALPPCHLLYQFYVAEGKLSAQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFN+AS ++L MMLA     + GE + + GD HLY NH EQ   QLSR PR L
Sbjct: 181 SDSFLGLPFNMASLAVLVMMLAQQADLEPGEIVVSTGDSHLYLNHMEQVQEQLSREPRPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  +R+EDF L  Y PH AI A V+V
Sbjct: 241 PTLAILRKPDSIYDYRFEDFELSGYNPHPAIPAPVAV 277


>gi|163791087|ref|ZP_02185507.1| thymidylate synthase [Carnobacterium sp. AT7]
 gi|159873643|gb|EDP67727.1| thymidylate synthase [Carnobacterium sp. AT7]
          Length = 315

 Score =  298 bits (763), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 140/312 (44%), Positives = 192/312 (61%), Gaps = 50/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL+L R V++ G+++ DRTG GT+S FG+QMRF+L +GFPLLTTK+V +  +  ELLWF
Sbjct: 4   EYLNLARKVLEVGNEKTDRTGTGTKSLFGHQMRFNLQEGFPLLTTKRVPFSLIKSELLWF 63

Query: 63  LRGDSNVSYLHRHGVSIWDEWA----------------------------------DKD- 87
           ++G++N+ YL +H   IWDEWA                                  +K+ 
Sbjct: 64  IKGNTNIRYLLQHNNHIWDEWAFERFVKSEDYKGPDMTNFGRKSLIDSEFNTLYLKEKEA 123

Query: 88  ---------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                          GELG +YG QWR W    G  IDQ+  +++ ++  P SRR +VSA
Sbjct: 124 FCTRILEDETFALQYGELGNVYGAQWRKWKTTQGETIDQLKDVIKLIKTSPDSRRMLVSA 183

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   
Sbjct: 184 WNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAHET 243

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEF+HTLGD HLY+NH EQ + QL+R P+ LP +I+N +   +  F  +D  +  Y
Sbjct: 244 GLEVGEFVHTLGDAHLYSNHIEQINKQLAREPKELPTLILNSSKTSIFDFEMDDIKIEGY 303

Query: 253 EPHAAILAKVSV 264
           +PH  I A ++V
Sbjct: 304 DPHPGIKAPIAV 315


>gi|53803146|ref|YP_115128.1| thymidylate synthase [Methylococcus capsulatus str. Bath]
 gi|62901250|sp|Q603S2|TYSY_METCA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|53756907|gb|AAU91198.1| thymidylate synthase [Methylococcus capsulatus str. Bath]
          Length = 260

 Score =  298 bits (763), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 145/264 (54%), Positives = 181/264 (68%), Gaps = 4/264 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  + DRTG GT S FG  MRFDLS+G PL+TTKK+H  S++HELL
Sbjct: 1   MRPYLDLLRDILDHGCPKGDRTGTGTLSVFGRMMRFDLSRGLPLVTTKKLHLPSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ G +NV  L RHGV+IWDEWAD +GELGP+YG QWR+W       IDQ++ +V+ LR
Sbjct: 61  WFVSGSTNVRDLQRHGVTIWDEWADDNGELGPVYGRQWRNW----NGAIDQLAGLVEQLR 116

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWN + +D MALPPCH  FQ +V +G+LS     RS DVFLG+PFNIA 
Sbjct: 117 RNPGSRRLLVSAWNPSDLDAMALPPCHYAFQCHVADGRLSLMFQMRSADVFLGLPFNIAG 176

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA   G++ GE I   GDVHLY NH EQA LQL+R P   P + +      L 
Sbjct: 177 YALLTHMLAQQTGYEPGELIWCGGDVHLYLNHLEQARLQLTREPYPPPTLKLARKPGSLF 236

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF +  Y+ H  I A V+V
Sbjct: 237 DYRYEDFVVEDYQAHPHIKAAVAV 260


>gi|116333431|ref|YP_794958.1| thymidylate synthase [Lactobacillus brevis ATCC 367]
 gi|122269882|sp|Q03S95|TYSY_LACBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116098778|gb|ABJ63927.1| thymidylate synthase [Lactobacillus brevis ATCC 367]
          Length = 316

 Score =  298 bits (763), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 192/311 (61%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G ++ DRTG GT S FGYQMRF+L +GFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKTVLTTGHEKTDRTGTGTISLFGYQMRFNLQEGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 66  RGDTNIRFLLQHHNHIWDEWAFQRYVDSPEYHGPDMTDFGRRSLVDADFNQRYQAEKKAF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      D  G+LG +YG QWR+W  + G  IDQ+++++++LR  P SRR IVSAW
Sbjct: 126 CDRIVTDQAFGDHFGDLGLVYGSQWRAWQGHQGETIDQLANVIETLRTHPDSRRMIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N A +  MALPPCH LFQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  +G
Sbjct: 186 NPADVPSMALPPCHTLFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTSLIAKEVG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + G+F+HTLGD H+Y+NH EQ   QL+R+P   PQ+ +NP+   +  +   D  +  Y+
Sbjct: 246 LEVGDFVHTLGDAHIYSNHVEQIKTQLARTPHAAPQLWLNPDKSSIFDYEMSDIKVTGYD 305

Query: 254 PHAAILAKVSV 264
           P  AI A V+V
Sbjct: 306 PEPAIKAPVAV 316


>gi|259503404|ref|ZP_05746306.1| thymidylate synthase [Lactobacillus antri DSM 16041]
 gi|259168649|gb|EEW53144.1| thymidylate synthase [Lactobacillus antri DSM 16041]
          Length = 320

 Score =  298 bits (763), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 151/312 (48%), Positives = 191/312 (61%), Gaps = 50/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L R+V+K G ++ DRTG GTRS FGYQMRFDLSKGFP+LTTKKV +  +  ELLWF
Sbjct: 9   QYLELARYVLKHGHEKTDRTGTGTRSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLWF 68

Query: 63  LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84
           LRGD+N+ +L +H   IWDEWA                                      
Sbjct: 69  LRGDTNIRFLLQHHNHIWDEWAFKKWVESDEYHGPDMTDFGHRWLVDADFKQQYLAEKKA 128

Query: 85  -------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                  D+D     G+LG +YG QWR W   +G  IDQI++++  ++  P SRR IVSA
Sbjct: 129 FCQRIVDDEDFAKKYGDLGLVYGSQWRHWKTSNGQTIDQIANVIHQIKTTPDSRRMIVSA 188

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A   
Sbjct: 189 WNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQC 248

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G Q G+F+HTLGD H+Y NH +Q   QLSR+PR  PQ+I+      +  +   D  L  Y
Sbjct: 249 GLQVGDFVHTLGDAHIYLNHLDQVKEQLSRTPREAPQLILPAEPKPIDQYEMTDIKLAGY 308

Query: 253 EPHAAILAKVSV 264
              AAI A V+V
Sbjct: 309 THEAAIKAPVAV 320


>gi|297571008|ref|YP_003696782.1| thymidylate synthase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931355|gb|ADH92163.1| thymidylate synthase [Arcanobacterium haemolyticum DSM 20595]
          Length = 266

 Score =  298 bits (762), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 144/263 (54%), Positives = 186/263 (70%), Gaps = 2/263 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL  V+  G+ + DRTG GT S FG Q+R+DLS+GFP +TTK V  K+V  ELLWF
Sbjct: 5   QYEDLLADVLANGTVKGDRTGTGTLSVFGRQLRYDLSQGFPRITTKFVAMKAVKGELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD+N+S+L   G+SIWDEWA+ DG+LGP+YG QWRSWP   G  IDQI++++  ++ +
Sbjct: 65  LRGDTNISWLRERGISIWDEWANDDGDLGPVYGYQWRSWPAPSGEHIDQIANVIDQIKNN 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA +D MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRLIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A   G   G+F+ + GD H+Y NH EQ   Q+SR P   P + +     D+ S+
Sbjct: 185 LLTHMVAQQTGLDVGDFVWSGGDCHIYLNHLEQVREQISREPYPFPTLALT-KAPDIFSY 243

Query: 243 RYEDFTLR-SYEPHAAILAKVSV 264
             +D +    Y+ H A+ A V+V
Sbjct: 244 TMDDISAADGYQHHPALHAPVAV 266


>gi|323342122|ref|ZP_08082355.1| thymidylate synthase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464547|gb|EFY09740.1| thymidylate synthase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 289

 Score =  297 bits (761), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 150/294 (51%), Positives = 198/294 (67%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL++ + V+  GS R DRTG GT   FGYQMRFDLSKGFPLLTTKKVH+ S+  ELL
Sbjct: 1   MKNYLEMCQFVLDEGSRREDRTGTGTTGVFGYQMRFDLSKGFPLLTTKKVHFPSLAKELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF+ GD+N+ +L  + V IW+EW                             A K GELG
Sbjct: 61  WFVSGDTNIKWLVENKVRIWNEWPYELFKKSDDYNGETMDEFIARIVADDLFAQKYGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR   D+ G  +DQI++++++++ +PYSRR I+SAWN   +D+MALPPCH   Q
Sbjct: 121 PVYGKQWR---DFGG--VDQINNVIETIKTNPYSRRIIMSAWNPTEVDQMALPPCHAFMQ 175

Query: 152 FYVDNG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           FYV N  KLS QLYQRS DVFLG+PFNIASY+LL  M+A V   + GEF+HT GD+H+YN
Sbjct: 176 FYVSNDRKLSLQLYQRSADVFLGVPFNIASYALLLHMIAKVCDLEVGEFVHTFGDLHIYN 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H++   +QL+R P++LPQ+II+ N   +  F++EDF +  Y+PH  I AKVSV
Sbjct: 236 DHYDAVQMQLAREPKSLPQLIIHGNQEKITDFKFEDFEVVGYDPHPLIKAKVSV 289


>gi|328957378|ref|YP_004374764.1| thymidylate synthase [Carnobacterium sp. 17-4]
 gi|328673702|gb|AEB29748.1| thymidylate synthase [Carnobacterium sp. 17-4]
          Length = 316

 Score =  297 bits (761), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 143/312 (45%), Positives = 187/312 (59%), Gaps = 50/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL+L + V++ G  + DRTG GT+S FGYQMR+DL KGFPLLTTK+V +  +  ELLWF
Sbjct: 5   EYLNLGKKVLEDGHVKTDRTGTGTKSLFGYQMRYDLQKGFPLLTTKRVPFGLIKSELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84
           ++G++N+ YL +H   IWDEWA                                      
Sbjct: 65  IKGNTNIRYLLQHNNHIWDEWAFERFVKSEEYVGPDMTDFGRRALVDEEFKAVYDVEKEA 124

Query: 85  ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                        K GELG +YG QWR W    G  IDQ+  ++Q ++  P SRR +VSA
Sbjct: 125 FCTRILEDDAFAAKYGELGNVYGAQWRRWKTTQGETIDQLKDVIQQIKTTPDSRRMLVSA 184

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  +
Sbjct: 185 WNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAHEV 244

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEF+HTLGD HLY+NHFEQ   QL+R PR  P + +N +   +  F  ED  +  Y
Sbjct: 245 GLEVGEFVHTLGDAHLYSNHFEQMKKQLAREPRDFPTIALNESKNSIFDFEMEDIQIEGY 304

Query: 253 EPHAAILAKVSV 264
           +PH  I A ++V
Sbjct: 305 DPHPGIKAPIAV 316


>gi|325571013|ref|ZP_08146585.1| thymidylate synthase [Enterococcus casseliflavus ATCC 12755]
 gi|325156098|gb|EGC68284.1| thymidylate synthase [Enterococcus casseliflavus ATCC 12755]
          Length = 315

 Score =  297 bits (761), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R ++  G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL  H   IWDEWA                                       
Sbjct: 65  KGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHELKQF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +  G+LG +YG QWR W    G  IDQI  +++ ++  P SRR IVSAW
Sbjct: 125 CEKILSDDTFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIEMIKTTPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV +G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPTMALPPCHTMFQFYVHDGRLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + G+FIHTLGD HLY+NH EQ   QL+RS R  P + +NP    +  F  ED TL  Y+
Sbjct: 245 LEVGDFIHTLGDAHLYSNHIEQMKEQLTRSVRPAPSLQLNPEKQSIFDFEMEDITLAGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|322383990|ref|ZP_08057720.1| thymidylate synthase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151467|gb|EFX44654.1| thymidylate synthase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 318

 Score =  297 bits (761), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L RHV++ G  + DRTG GT S FGYQMRF+L +GFPLLTTK++ ++ +V ELLWF+
Sbjct: 8   YLELCRHVLEHGEIKEDRTGTGTVSLFGYQMRFNLQEGFPLLTTKRIPFRLIVSELLWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL  H   IWDEWA K                                     
Sbjct: 68  KGDTNIRYLLEHNNHIWDEWAFKHYVESSSYQGPDMTDFGLRSQRDEAFLIQYEEQMNKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR+W   +G  IDQ+  I+ +++ +P SRR IVSAW
Sbjct: 128 TERILKDPQFALEFGDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  M LPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 188 NPEDIPSMVLPPCHTLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHECG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y+NH +Q  LQLSR P+ LP + INP +  +      D  L  Y+
Sbjct: 248 IEAGEFIHTLGDAHVYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEGYD 307

Query: 254 PHAAILAKVSV 264
           PH +I A V+V
Sbjct: 308 PHPSIKAPVAV 318


>gi|260662124|ref|ZP_05863020.1| thymidylate synthase [Lactobacillus fermentum 28-3-CHN]
 gi|260553507|gb|EEX26399.1| thymidylate synthase [Lactobacillus fermentum 28-3-CHN]
          Length = 319

 Score =  297 bits (761), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 189/313 (60%), Gaps = 51/313 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL RHV++FG  + DRTG GT+S FGYQMRF+L +GFP+LTTKKV +  V  ELLW
Sbjct: 8   EQYLDLARHVLEFGDQKGDRTGTGTKSVFGYQMRFNLQEGFPILTTKKVAFGLVKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K                                   
Sbjct: 68  FLRGDTNIRFLLEHKNHIWDEWAFKKWVESDEYTGPDMTDFGRRSLVDAAFNEEYKKEKR 127

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G+LG +YG QWRSW   +G V DQI  +++ ++ +P SRR IV+
Sbjct: 128 AFCQRILEDDDFAKQYGDLGLVYGSQWRSWQTPNGPV-DQIKKVIEQIKTNPASRRLIVT 186

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN A +D MALPPCH +FQFYV+NGKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 187 AWNPADVDNMALPPCHTMFQFYVNNGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 246

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NH +Q   QLSR     PQ+I+      +  ++ ED  L  
Sbjct: 247 CGLEVGEFVHTLGDAHIYLNHLDQIKEQLSRPVHQAPQLILPAEAKPIDEYQMEDIKLEG 306

Query: 252 YEPHAAILAKVSV 264
           YE   AI A V+V
Sbjct: 307 YEHEDAIKAPVAV 319


>gi|255975838|ref|ZP_05426424.1| thymidylate synthase [Enterococcus faecalis T2]
 gi|307278059|ref|ZP_07559143.1| thymidylate synthase [Enterococcus faecalis TX0860]
 gi|255968710|gb|EET99332.1| thymidylate synthase [Enterococcus faecalis T2]
 gi|306505456|gb|EFM74642.1| thymidylate synthase [Enterococcus faecalis TX0860]
          Length = 315

 Score =  297 bits (761), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLTKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|257086729|ref|ZP_05581090.1| thymidylate synthase [Enterococcus faecalis D6]
 gi|256994759|gb|EEU82061.1| thymidylate synthase [Enterococcus faecalis D6]
 gi|315027251|gb|EFT39183.1| thymidylate synthase [Enterococcus faecalis TX2137]
          Length = 315

 Score =  297 bits (761), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|307271003|ref|ZP_07552286.1| thymidylate synthase [Enterococcus faecalis TX4248]
 gi|307289121|ref|ZP_07569077.1| thymidylate synthase [Enterococcus faecalis TX0109]
 gi|306499830|gb|EFM69191.1| thymidylate synthase [Enterococcus faecalis TX0109]
 gi|306512501|gb|EFM81150.1| thymidylate synthase [Enterococcus faecalis TX4248]
 gi|315036993|gb|EFT48925.1| thymidylate synthase [Enterococcus faecalis TX0027]
 gi|315164030|gb|EFU08047.1| thymidylate synthase [Enterococcus faecalis TX1302]
 gi|323480739|gb|ADX80178.1| thymidylate synthase [Enterococcus faecalis 62]
          Length = 315

 Score =  297 bits (761), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|306823471|ref|ZP_07456846.1| thymidylate synthase [Bifidobacterium dentium ATCC 27679]
 gi|309802582|ref|ZP_07696686.1| thymidylate synthase [Bifidobacterium dentium JCVIHMP022]
 gi|304553178|gb|EFM41090.1| thymidylate synthase [Bifidobacterium dentium ATCC 27679]
 gi|308220646|gb|EFO76954.1| thymidylate synthase [Bifidobacterium dentium JCVIHMP022]
          Length = 290

 Score =  296 bits (759), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 143/265 (53%), Positives = 185/265 (69%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG Q+RFDL  GFPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRRILTEGTLKSDRTGTGTISLFGQQIRFDLKDGFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L  H V IWDEWAD++G+LGP+YG QWRSWP    D     IDQI++++  +
Sbjct: 87  KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQITNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMVVSAWNPAEVEHMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P++ I+     L
Sbjct: 207 SYSLLTLMMAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLGREPYPYPKIRIH-EAESL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y  H  I A V+V
Sbjct: 266 FDYDYSDFEIVDYRHHPTIKAPVAV 290


>gi|87122432|ref|ZP_01078312.1| thymidylate synthetase [Marinomonas sp. MED121]
 gi|86162225|gb|EAQ63510.1| thymidylate synthetase [Marinomonas sp. MED121]
          Length = 277

 Score =  296 bits (759), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 135/277 (48%), Positives = 191/277 (68%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y+ LL  V++ G  + DRTG GT S FG Q+R+DL++GFPLLTTKK+H +S++HELL
Sbjct: 1   MLPYIQLLNDVLENGQFKGDRTGTGTYSVFGRQVRYDLAEGFPLLTTKKLHIRSILHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GV+IWDEWA K+GELGP+YG QWRSW   DG   DQ+++++ SL+
Sbjct: 61  WFLKGETNIQYLSDNGVTIWDEWATKEGELGPVYGAQWRSWKGEDGKEYDQVTALINSLK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRRHI++ WNVA +              +MALPPCH L+QFYV + KLS  LY RS
Sbjct: 121 NNPNSRRHIINGWNVACLPDESKAPDVNAAEGRMALPPCHVLYQFYVCDNKLSASLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG P+N AS + LT MLA       GE + ++GD HLY+NH EQA +Q+ R+P+ L
Sbjct: 181 NDLFLGNPYNTASLAFLTHMLAQQCDLDVGEIVISIGDCHLYSNHIEQAKIQVQRTPKKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I+     +  +++EDF +  Y+P   I A +++
Sbjct: 241 PKLKIHRKPESIFDYKFEDFEILDYDPEPHISAPIAI 277


>gi|171741175|ref|ZP_02916982.1| hypothetical protein BIFDEN_00247 [Bifidobacterium dentium ATCC
           27678]
 gi|283455458|ref|YP_003360022.1| thyA Thymidylate synthase [Bifidobacterium dentium Bd1]
 gi|171276789|gb|EDT44450.1| hypothetical protein BIFDEN_00247 [Bifidobacterium dentium ATCC
           27678]
 gi|283102092|gb|ADB09198.1| thyA Thymidylate synthase [Bifidobacterium dentium Bd1]
          Length = 290

 Score =  296 bits (759), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 143/265 (53%), Positives = 185/265 (69%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG Q+RFDL  GFPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRRIMTEGTLKSDRTGTGTISLFGQQIRFDLKDGFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L  H V IWDEWAD++G+LGP+YG QWRSWP    D     IDQI++++  +
Sbjct: 87  KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQITNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMVVSAWNPAEVEHMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P++ I+     L
Sbjct: 207 SYSLLTLMMAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLGREPYPYPKIRIH-EAESL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y  H  I A V+V
Sbjct: 266 FDYDYSDFEIVDYRHHPTIKAPVAV 290


>gi|320103743|ref|YP_004179334.1| thymidylate synthase [Isosphaera pallida ATCC 43644]
 gi|319751025|gb|ADV62785.1| thymidylate synthase [Isosphaera pallida ATCC 43644]
          Length = 285

 Score =  296 bits (759), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 151/274 (55%), Positives = 190/274 (69%), Gaps = 13/274 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTR-----STFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
           YLDLLR V+  G  +  R  VG       S FG Q+R+DLS  FPL TTK+V + SVVHE
Sbjct: 12  YLDLLRDVLHHGRRQPTRAKVGGEFIDALSVFGRQVRYDLSDRFPLFTTKRVSFHSVVHE 71

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
           LLWFLRG++NV  L   GV+IWDEWAD+ GELGPIYG QWR+W   DG V DQI +I+  
Sbjct: 72  LLWFLRGETNVRSLQAAGVTIWDEWADEAGELGPIYGRQWRAWNGPDGRVFDQIQAILDG 131

Query: 119 ---LRADPYS---RRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVF 171
              LR DP +   RR I++AWNVA ++KMALPPCHCL QF++D+ G+LSCQLYQRS D+F
Sbjct: 132 LTQLRQDPRASVGRRLILNAWNVADLEKMALPPCHCLAQFHLDDAGRLSCQLYQRSADLF 191

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFN+ASY+LLT ++A V G + GEFIHTLGD H+Y NH +Q   QL R PR LP++ 
Sbjct: 192 LGVPFNVASYALLTRLIAHVQGLEPGEFIHTLGDAHIYVNHLDQVRRQLERDPRPLPRVT 251

Query: 232 INPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  ++   L   R E   L  Y PH A+  +V+V
Sbjct: 252 LAEDLDPTLKKVRREQIVLEGYHPHPALPGEVAV 285


>gi|184155363|ref|YP_001843703.1| thymidylate synthase [Lactobacillus fermentum IFO 3956]
 gi|227515167|ref|ZP_03945216.1| thymidylate synthase [Lactobacillus fermentum ATCC 14931]
 gi|183226707|dbj|BAG27223.1| thymidylate synthase [Lactobacillus fermentum IFO 3956]
 gi|227086499|gb|EEI21811.1| thymidylate synthase [Lactobacillus fermentum ATCC 14931]
 gi|299783196|gb|ADJ41194.1| Thymidylate synthase [Lactobacillus fermentum CECT 5716]
          Length = 319

 Score =  296 bits (758), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 188/313 (60%), Gaps = 51/313 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL RHV++FG  + DRTG GT+S FGYQMRF+L +GFP+LTTKKV +  V  ELLW
Sbjct: 8   EQYLDLARHVLEFGDQKGDRTGTGTKSVFGYQMRFNLQEGFPILTTKKVAFGLVKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K                                   
Sbjct: 68  FLRGDTNIRFLLEHKNHIWDEWAFKKWVESDEYTGPDMTDFGRRSLVDAAFNEEYKKEKR 127

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWRSW   +G V DQI  +++ ++ +P SRR IV+
Sbjct: 128 AFCQRILEDDDFAKQYGNLGLVYGSQWRSWQTPNGPV-DQIKKVIEQIKTNPDSRRLIVT 186

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN A +D MALPPCH +FQFYV+NGKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 187 AWNPADVDNMALPPCHTMFQFYVNNGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 246

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NH +Q   QLSR     PQ+I+      +  ++ ED  L  
Sbjct: 247 CGLEVGEFVHTLGDAHIYLNHLDQIKEQLSRPVHQAPQLILPAEAKPIDEYQMEDIKLEG 306

Query: 252 YEPHAAILAKVSV 264
           YE   AI A V+V
Sbjct: 307 YEHEDAIKAPVAV 319


>gi|256958995|ref|ZP_05563166.1| thymidylate synthase [Enterococcus faecalis DS5]
 gi|256949491|gb|EEU66123.1| thymidylate synthase [Enterococcus faecalis DS5]
          Length = 315

 Score =  296 bits (758), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH  FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTTFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|90961685|ref|YP_535601.1| thymidylate synthase [Lactobacillus salivarius UCC118]
 gi|227890773|ref|ZP_04008578.1| thymidylate synthase [Lactobacillus salivarius ATCC 11741]
 gi|301300762|ref|ZP_07206946.1| thymidylate synthase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|123391358|sp|Q1WU17|TYSY_LACS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|90820879|gb|ABD99518.1| Thymidylate synthase [Lactobacillus salivarius UCC118]
 gi|227867182|gb|EEJ74603.1| thymidylate synthase [Lactobacillus salivarius ATCC 11741]
 gi|300214485|gb|ADJ78901.1| Thymidylate synthase (TS) (TSase) [Lactobacillus salivarius CECT
           5713]
 gi|300851612|gb|EFK79312.1| thymidylate synthase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 318

 Score =  296 bits (757), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 190/311 (61%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+R +++ G ++ DRTG GT+S FGYQMRF+L++GFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLQLIRDILEKGHEKSDRTGTGTKSLFGYQMRFNLAEGFPLLTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRAQEDDNFNKVYQDEKKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   +G  IDQI  ++++++ +P SRR IV+AW
Sbjct: 128 CQKIVEDQEFANKFGNLGDVYGAQWRHWQTRNGETIDQIKDVIETIKNNPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV++GKLSCQLYQRS DVFLG+PFNIASY+LLT M+A   G
Sbjct: 188 NPEDVPLSALPPCHTLFQFYVNDGKLSCQLYQRSADVFLGVPFNIASYALLTHMIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NH +Q + QL R P   P + +NP   +++ F  ED  +++Y 
Sbjct: 248 LEVGEFVHTLGDAHIYLNHLDQVNEQLQRKPNDAPTLWLNPEKKNIMDFEMEDIKVKNYH 307

Query: 254 PHAAILAKVSV 264
            H+AI A V+V
Sbjct: 308 SHSAIKAPVAV 318


>gi|329766967|ref|ZP_08258495.1| thymidylate synthase [Gemella haemolysans M341]
 gi|328837692|gb|EGF87317.1| thymidylate synthase [Gemella haemolysans M341]
          Length = 310

 Score =  295 bits (756), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 144/312 (46%), Positives = 200/312 (64%), Gaps = 56/312 (17%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL L +H++  G ++ DRTGVGT+S FGYQM+FDLS+GFPLLTTKKV++  V  ELLWF
Sbjct: 5   EYLKLCQHILDNGIEKEDRTGVGTKSVFGYQMKFDLSEGFPLLTTKKVNFNLVWSELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84
           ++GD+N+ +L  +  +IW+EWA                                      
Sbjct: 65  IKGDTNIKFLLENKNNIWNEWAFKKWIESEKYTGPDMTDFGHRTLVDEEFSKQYKEQMAI 124

Query: 85  ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                       +K G+LG +YG QWR++     N IDQ+ ++V+ ++ +P SRR IVS+
Sbjct: 125 FKERVLTDESFSEKYGDLGNVYGKQWRNF-----NGIDQLKNVVEQIKTNPSSRRLIVSS 179

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN A +D MALPPCH LFQFYV++GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A   
Sbjct: 180 WNPAEVDTMALPPCHSLFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKEC 239

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEF+HTLGD H+Y NHF+Q   Q+SR+P +LP++ +N +   +   + ED  + +Y
Sbjct: 240 GLEVGEFVHTLGDAHIYKNHFDQVKEQMSRTPYSLPELKVN-DFESIFDLKIEDVEVVNY 298

Query: 253 EPHAAILAKVSV 264
           E H  I A ++V
Sbjct: 299 ESHPFIKAPIAV 310


>gi|257867789|ref|ZP_05647442.1| thymidylate synthase [Enterococcus casseliflavus EC30]
 gi|257874116|ref|ZP_05653769.1| thymidylate synthase [Enterococcus casseliflavus EC10]
 gi|257801872|gb|EEV30775.1| thymidylate synthase [Enterococcus casseliflavus EC30]
 gi|257808280|gb|EEV37102.1| thymidylate synthase [Enterococcus casseliflavus EC10]
          Length = 315

 Score =  295 bits (756), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R ++  G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL  H   IWDEWA                                       
Sbjct: 65  KGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHELKLF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +  G+LG +YG QWR W    G  IDQI  ++  ++  P SRR IVSAW
Sbjct: 125 CEKILADDAFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIDMIKTTPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV  G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPTMALPPCHTMFQFYVHKGRLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + G+F+HTLGD HLY+NH EQ   QL+RS R  P + +NP    +  F  ED TL  Y+
Sbjct: 245 LEVGDFVHTLGDAHLYSNHMEQMKEQLTRSVRPAPTLQLNPEKQSIFDFEMEDITLAGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|257876680|ref|ZP_05656333.1| thymidylate synthase [Enterococcus casseliflavus EC20]
 gi|257810846|gb|EEV39666.1| thymidylate synthase [Enterococcus casseliflavus EC20]
          Length = 315

 Score =  295 bits (756), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R ++  G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL  H   IWDEWA                                       
Sbjct: 65  KGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHELKLF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +  G+LG +YG QWR W    G  IDQI  ++  ++  P SRR IVSAW
Sbjct: 125 CEKILADDAFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIDMIKTTPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV  G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPTMALPPCHTMFQFYVHEGRLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + G+F+HTLGD HLY+NH EQ   QL+RS R  P + +NP    +  F  ED TL  Y+
Sbjct: 245 LEVGDFVHTLGDAHLYSNHMEQMKEQLTRSVRPAPTLQLNPEKQSIFDFEMEDITLAGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|239636892|ref|ZP_04677891.1| thymidylate synthase [Staphylococcus warneri L37603]
 gi|239597566|gb|EEQ80064.1| thymidylate synthase [Staphylococcus warneri L37603]
          Length = 318

 Score =  295 bits (755), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   ++K G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILKIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIKYLLQYNNNIWNEWAFENYINSEDYHGPDMTNFGHRSLQDSEFNELYKAEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D DGN +DQ+ ++++ ++  P SRRHIVSAW
Sbjct: 129 KENILNDDTFAQKYGDLGNVYGKQWRDWEDKDGNHVDQLKTVIEQIKQHPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +  + QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAVETQLSRDSFNPPQIKINTD-KSIFDINYEDIELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|194246714|ref|YP_002004353.1| thymidylate synthase [Candidatus Phytoplasma mali]
 gi|254790246|sp|B3QZX0|TYSY_PHYMT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|193807071|emb|CAP18507.1| Thymidylate synthase [Candidatus Phytoplasma mali]
          Length = 288

 Score =  295 bits (754), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 138/293 (47%), Positives = 192/293 (65%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L R ++ +G  + DRT  GTRS FGYQMRF+L KGFPLLTTKK+++K+++HELL
Sbjct: 1   MQAYLNLCRDILNYGKKKIDRTKTGTRSIFGYQMRFNLEKGFPLLTTKKMNFKAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL ++ V+IW+EW                             A   G+LG
Sbjct: 61  WFIKGDTNIRYLVQNNVNIWNEWPYQKYCNSNFFQNLTLQEFIDKIIIDEKFAKIHGDLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           PIYG QWR++       IDQ++ ++  ++ +P+SRR I++AW+  +I  M LPPCH + Q
Sbjct: 121 PIYGHQWRNFQG-----IDQLTDLISEIKKNPHSRRLILTAWDPTVIKDMLLPPCHVMIQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
            YV+  K+S QLYQRSGDVFLGIPFNIASYSLL +++A   G +  EFIHT+GD H+YNN
Sbjct: 176 CYVEKNKISMQLYQRSGDVFLGIPFNIASYSLLLIIIAQCTGLKPFEFIHTIGDAHIYNN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ   Q+ R P+ LP M +NP+I+D+  F + DF L  YE +  +   V+V
Sbjct: 236 HIEQIQKQIKRIPKKLPIMTLNPHIIDINQFTFNDFNLEKYESYGILKGVVAV 288


>gi|294781666|ref|ZP_06747001.1| thymidylate synthase [Enterococcus faecalis PC1.1]
 gi|294451218|gb|EFG19685.1| thymidylate synthase [Enterococcus faecalis PC1.1]
 gi|315033984|gb|EFT45916.1| thymidylate synthase [Enterococcus faecalis TX0017]
 gi|329571685|gb|EGG53366.1| thymidylate synthase [Enterococcus faecalis TX1467]
          Length = 317

 Score =  294 bits (753), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 147/313 (46%), Positives = 187/313 (59%), Gaps = 52/313 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGN--VIDQISSIVQSLRADPYSRRHIVS 131
                      +K GELG IYG QWR W   DGN   IDQ++++++ ++ +P SRR IVS
Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGNGSFIDQLANVIEMIKTNPDSRRLIVS 184

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A  
Sbjct: 185 AWNPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHE 244

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G   GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  
Sbjct: 245 TGLAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEG 304

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I A ++V
Sbjct: 305 YDPHPTIKAPIAV 317


>gi|295396869|ref|ZP_06806997.1| thymidylate synthase [Aerococcus viridans ATCC 11563]
 gi|294974895|gb|EFG50594.1| thymidylate synthase [Aerococcus viridans ATCC 11563]
          Length = 317

 Score =  294 bits (753), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 150/312 (48%), Positives = 188/312 (60%), Gaps = 50/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD L+H++  G D+ DRTGVGTRS FGYQMRFDLS+GFPLLTTKKV +  +  ELLWF
Sbjct: 6   QYLDFLQHILDNGQDKSDRTGVGTRSVFGYQMRFDLSEGFPLLTTKKVPFGLIKSELLWF 65

Query: 63  LRGDSNVSYLHRHGVSIWDEWA----------------------DKD------------- 87
           L+GD+N+ YL  +   IWDEWA                      D D             
Sbjct: 66  LKGDTNIRYLLENNNHIWDEWAFKRWVESDAYQGPDMTDFGLRADADPEFKKVYQEVKQA 125

Query: 88  ---------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                          GELG +YG QWR W   +G+ IDQI++I+  L+ +P SRR I+SA
Sbjct: 126 FCQRVLEDDDFAREFGELGNVYGKQWRHWETREGDSIDQIANIIDQLKHNPDSRRIILSA 185

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH + QFYV +GKLSCQLYQRSGD FLG+PFNIASY+LLT +LA   
Sbjct: 186 WNPEDVPDMALPPCHTMSQFYVQDGKLSCQLYQRSGDAFLGVPFNIASYALLTHLLAREA 245

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + G+++HT GD H+YNNHF Q   QLSR P  LP + I      +     +D  ++ Y
Sbjct: 246 GLEVGDYVHTFGDAHIYNNHFNQVYEQLSRQPLDLPTLEIGGEGKSIFDLEKDDIKVKGY 305

Query: 253 EPHAAILAKVSV 264
           + H AI A V+V
Sbjct: 306 KAHDAIKAPVAV 317


>gi|257898835|ref|ZP_05678488.1| thymidylate synthase [Enterococcus faecium Com15]
 gi|293570261|ref|ZP_06681330.1| thymidylate synthase [Enterococcus faecium E980]
 gi|257836747|gb|EEV61821.1| thymidylate synthase [Enterococcus faecium Com15]
 gi|291609668|gb|EFF38929.1| thymidylate synthase [Enterococcus faecium E980]
          Length = 315

 Score =  294 bits (752), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++   IWDEWA                                       
Sbjct: 65  KGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLADPEFNEEYKKQSKLF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G+LG IYG QWR W   DG  IDQI  ++++++  P SRR IVSAW
Sbjct: 125 CEKILTDDSFAEKYGDLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R  P + +N     +  F  ED  L  Y+
Sbjct: 245 LEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQLEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|315640698|ref|ZP_07895800.1| thymidylate synthase [Enterococcus italicus DSM 15952]
 gi|315483453|gb|EFU73947.1| thymidylate synthase [Enterococcus italicus DSM 15952]
          Length = 315

 Score =  293 bits (751), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R ++  G+ + DRTG GT+S FG+QMRFDLS+GFPLLTTK+V +  +  ELLWF+
Sbjct: 5   YLDLGRKILTEGNSKSDRTGTGTKSIFGHQMRFDLSEGFPLLTTKRVPFGLIKSELLWFI 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL +H   IWDEWA                                       
Sbjct: 65  KGDTNIRYLLQHNNHIWDEWAFEKYVASDSYHGPDMTNFGRRSLEDDAFNEVYQNELAQF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      D+ G+LG IYG QWR W    G  IDQ+  ++  ++  P SRR IVSAW
Sbjct: 125 CERIVNDERFADEFGDLGHIYGYQWRHWDTAQGGFIDQLQDVIHQIKHTPDSRRMIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV  GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A    
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVHEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETN 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEF+HTLGD HLY NHF+Q   QL+RS R  P++++NP    +  F   D TL  Y+
Sbjct: 245 LQVGEFVHTLGDAHLYMNHFDQMTEQLTRSVRPAPKLVLNPEKQSIFDFDVADITLEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|312869138|ref|ZP_07729312.1| thymidylate synthase [Lactobacillus oris PB013-T2-3]
 gi|311095384|gb|EFQ53654.1| thymidylate synthase [Lactobacillus oris PB013-T2-3]
          Length = 320

 Score =  293 bits (751), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 150/315 (47%), Positives = 193/315 (61%), Gaps = 54/315 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL R+V++ G ++ DRTG GTRS FGYQMRFDL+KGFP+LTTKKV +  +  ELLW
Sbjct: 8   QQYLDLARYVLENGHEKTDRTGTGTRSVFGYQMRFDLAKGFPILTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------DKD---------- 87
           FLRGD+N+ +L +H   IWDEWA                        D+D          
Sbjct: 68  FLRGDTNIRFLLQHHNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLVDEDFKKQYLAEKK 127

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G+LG +YG QWR W   +G  IDQI++++  ++    SRR IVS
Sbjct: 128 AFCQRIIDDADFAKKYGDLGLVYGSQWRHWKTSNGETIDQIANVIHQIKTTSDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII--NPNIVDLLSFRYEDFTL 249
            G Q G+F+HTLGD H+Y NH +Q   QLSR+P   P++I+   P ++D   +  ED  L
Sbjct: 248 CGLQVGDFVHTLGDAHIYLNHLDQIKEQLSRTPHEAPRLILPAEPKLID--QYEMEDIKL 305

Query: 250 RSYEPHAAILAKVSV 264
             Y   AAI A V+V
Sbjct: 306 EGYTHEAAIKAPVAV 320


>gi|257887704|ref|ZP_05667357.1| thymidylate synthase [Enterococcus faecium 1,141,733]
 gi|257896198|ref|ZP_05675851.1| thymidylate synthase [Enterococcus faecium Com12]
 gi|293377199|ref|ZP_06623407.1| thymidylate synthase [Enterococcus faecium PC4.1]
 gi|257823758|gb|EEV50690.1| thymidylate synthase [Enterococcus faecium 1,141,733]
 gi|257832763|gb|EEV59184.1| thymidylate synthase [Enterococcus faecium Com12]
 gi|292644219|gb|EFF62321.1| thymidylate synthase [Enterococcus faecium PC4.1]
          Length = 315

 Score =  293 bits (751), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 182/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++   IWDEWA                                       
Sbjct: 65  KGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLTDPEFNEEYKKQSKLF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G LG IYG QWR W   DG  IDQI  ++++++  P SRR IVSAW
Sbjct: 125 CEKILTDDSFAEKYGNLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R  P + +N     +  F  ED  L  Y+
Sbjct: 245 LEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQLEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|119503469|ref|ZP_01625552.1| Thymidylate synthase [marine gamma proteobacterium HTCC2080]
 gi|119460531|gb|EAW41623.1| Thymidylate synthase [marine gamma proteobacterium HTCC2080]
          Length = 277

 Score =  293 bits (751), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 143/277 (51%), Positives = 183/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR +   G+ R DRTG GTRS FG Q+RFDL  GFPLLTTKKVH+KSV +EL+
Sbjct: 1   MRAYLDLLRDIRDHGAVRTDRTGTGTRSLFGRQLRFDLKDGFPLLTTKKVHFKSVANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N ++L  HGVSIWDEWA + G+LGP+YG QWR WP  DG  IDQ++ ++  L+
Sbjct: 61  WFLKGDTNTAWLKEHGVSIWDEWATEQGDLGPLYGAQWRRWPTQDGREIDQLAYVLDCLK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR +   WNV  +              +MALPPCH L+QFYV +GKLS  L+ RS
Sbjct: 121 NRPDSRRILFHGWNVEYLPDETLSPQENVRAGRMALPPCHLLYQFYVVDGKLSTLLFIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIAS +LLT MLA   G    E + ++GD H+Y+NH +Q ++QL+RSP   
Sbjct: 181 SDTFLGLPFNIASVALLTHMLAQQSGLGVSEVVVSIGDAHIYSNHVDQVEVQLARSPAPP 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + +      L  + YEDF L  Y P A I A V++
Sbjct: 241 PTLKLLRQPDSLFDYCYEDFALEGYSPQAHISAPVAI 277


>gi|227551179|ref|ZP_03981228.1| thymidylate synthase [Enterococcus faecium TX1330]
 gi|227179647|gb|EEI60619.1| thymidylate synthase [Enterococcus faecium TX1330]
          Length = 324

 Score =  293 bits (750), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 182/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  ELLWFL
Sbjct: 14  YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++   IWDEWA                                       
Sbjct: 74  KGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLTDPEFNEEYKKQSKLF 133

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G LG IYG QWR W   DG  IDQI  ++++++  P SRR IVSAW
Sbjct: 134 CEKILTDDSFAEKYGNLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLIVSAW 193

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 194 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 253

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R  P + +N     +  F  ED  L  Y+
Sbjct: 254 LEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQLEGYD 313

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 314 PHPTIKAPIAV 324


>gi|257884869|ref|ZP_05664522.1| thymidylate synthase [Enterococcus faecium 1,231,501]
 gi|261207592|ref|ZP_05922277.1| thymidylate synthase [Enterococcus faecium TC 6]
 gi|289565104|ref|ZP_06445557.1| thymidylate synthase [Enterococcus faecium D344SRF]
 gi|293556751|ref|ZP_06675314.1| thymidylate synthase [Enterococcus faecium E1039]
 gi|294614834|ref|ZP_06694729.1| thymidylate synthase [Enterococcus faecium E1636]
 gi|294617513|ref|ZP_06697144.1| thymidylate synthase [Enterococcus faecium E1679]
 gi|257820707|gb|EEV47855.1| thymidylate synthase [Enterococcus faecium 1,231,501]
 gi|260077975|gb|EEW65681.1| thymidylate synthase [Enterococcus faecium TC 6]
 gi|289163111|gb|EFD10958.1| thymidylate synthase [Enterococcus faecium D344SRF]
 gi|291592296|gb|EFF23910.1| thymidylate synthase [Enterococcus faecium E1636]
 gi|291596253|gb|EFF27515.1| thymidylate synthase [Enterococcus faecium E1679]
 gi|291601083|gb|EFF31372.1| thymidylate synthase [Enterococcus faecium E1039]
          Length = 315

 Score =  293 bits (750), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++   IWDEWA                                       
Sbjct: 65  KGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQSKLF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +  G+LG IYG QWR W   DG  IDQI  ++++++  P SRR IVSAW
Sbjct: 125 CEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R  P +++N     +  F  ED  L  Y+
Sbjct: 245 LAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQLEGYD 304

Query: 254 PHAAILAKVSV 264
           PH AI A ++V
Sbjct: 305 PHPAIKAPIAV 315


>gi|257869664|ref|ZP_05649317.1| thymidylate synthase [Enterococcus gallinarum EG2]
 gi|257803828|gb|EEV32650.1| thymidylate synthase [Enterococcus gallinarum EG2]
          Length = 315

 Score =  293 bits (750), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + +++ G+ + DRTG GT+S FG+QMRFDLS+GFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLDLGKKILETGNVKGDRTGTGTKSIFGHQMRFDLSQGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ +L +H   IWDEWA                                       
Sbjct: 65  KGDTNIRFLLQHKNHIWDEWAFERYIKSEDYTGPDMTDFGRRSLIDEEFNASYQEELQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G+LG +YG QWR W    G  IDQI  +++ ++  P SRR IVSAW
Sbjct: 125 CERILNDEAFAEKFGDLGHVYGYQWRHWETTKGEFIDQIKEVIEMIKTTPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV  G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPTMALPPCHTMFQFYVHEGRLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEFIHTLGD HLY+NH EQ   QLSR+ R+ P + +NP    +  F   D T+  Y+
Sbjct: 245 LQVGEFIHTLGDAHLYSNHMEQMKEQLSRTIRSAPTLHLNPEKQSIFDFEMGDITIEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|194467928|ref|ZP_03073914.1| Thymidylate synthase [Lactobacillus reuteri 100-23]
 gi|194452781|gb|EDX41679.1| Thymidylate synthase [Lactobacillus reuteri 100-23]
          Length = 320

 Score =  293 bits (749), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 146/313 (46%), Positives = 188/313 (60%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL+R+V+  G  + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV +  +  ELLW
Sbjct: 8   EQYLDLIRYVLANGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIRFLLQHKNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W    G+ IDQI++++Q ++  P SRR IVS
Sbjct: 128 SFCQRILDDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NH +Q   QL+R+P   P++I+      +  +   D  L  
Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307

Query: 252 YEPHAAILAKVSV 264
           Y   +AI A V+V
Sbjct: 308 YTHESAIKAPVAV 320


>gi|329770535|ref|ZP_08261913.1| thymidylate synthase [Gemella sanguinis M325]
 gi|328836284|gb|EGF85953.1| thymidylate synthase [Gemella sanguinis M325]
          Length = 310

 Score =  293 bits (749), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 143/312 (45%), Positives = 198/312 (63%), Gaps = 56/312 (17%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YLDL +H++  G +++DRTGVGT+S FGYQM+FDL+ GFPLLTTKKV++  V  ELLWF
Sbjct: 5   EYLDLCKHILDNGIEKKDRTGVGTKSIFGYQMKFDLNNGFPLLTTKKVNFNLVWSELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84
           ++GD+N+ +L ++  +IW+EWA                                      
Sbjct: 65  IKGDTNIRFLLQNNNNIWNEWAFKKWVESDEYNGPDMTDFGHRTLVDEDFAKDYKEQMKF 124

Query: 85  ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                       +K G+LG +YG QWR++     N +DQ+ ++++ ++ +P SRR IVS+
Sbjct: 125 FKEKILTDDEFSNKYGDLGNVYGKQWRNF-----NGVDQLKNVIEQIKENPSSRRLIVSS 179

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN A +D MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A   
Sbjct: 180 WNPAEVDTMALPPCHSLFQFYVSDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKEC 239

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
             + GEF+HTLGD H+YNNHF+Q + Q+SR+P  LP + IN     +   +  D  L +Y
Sbjct: 240 NLEVGEFVHTLGDAHIYNNHFDQVNEQISRTPYDLPSLKINE-FQSIFDLKISDVELVNY 298

Query: 253 EPHAAILAKVSV 264
           E H  I A ++V
Sbjct: 299 ESHPFIKAPIAV 310


>gi|69246745|ref|ZP_00604093.1| Thymidylate synthase [Enterococcus faecium DO]
 gi|314938020|ref|ZP_07845330.1| thymidylate synthase [Enterococcus faecium TX0133a04]
 gi|314941994|ref|ZP_07848855.1| thymidylate synthase [Enterococcus faecium TX0133C]
 gi|314948753|ref|ZP_07852125.1| thymidylate synthase [Enterococcus faecium TX0082]
 gi|314951771|ref|ZP_07854810.1| thymidylate synthase [Enterococcus faecium TX0133A]
 gi|314991822|ref|ZP_07857280.1| thymidylate synthase [Enterococcus faecium TX0133B]
 gi|314995863|ref|ZP_07860950.1| thymidylate synthase [Enterococcus faecium TX0133a01]
 gi|68195099|gb|EAN09559.1| Thymidylate synthase [Enterococcus faecium DO]
 gi|313589967|gb|EFR68812.1| thymidylate synthase [Enterococcus faecium TX0133a01]
 gi|313593633|gb|EFR72478.1| thymidylate synthase [Enterococcus faecium TX0133B]
 gi|313596050|gb|EFR74895.1| thymidylate synthase [Enterococcus faecium TX0133A]
 gi|313599246|gb|EFR78091.1| thymidylate synthase [Enterococcus faecium TX0133C]
 gi|313642595|gb|EFS07175.1| thymidylate synthase [Enterococcus faecium TX0133a04]
 gi|313644819|gb|EFS09399.1| thymidylate synthase [Enterococcus faecium TX0082]
          Length = 324

 Score =  293 bits (749), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  ELLWFL
Sbjct: 14  YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++   IWDEWA                                       
Sbjct: 74  KGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQSKLF 133

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +  G+LG IYG QWR W   DG  IDQI  ++++++  P SRR IVSAW
Sbjct: 134 CEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKQVIEAIKKTPDSRRLIVSAW 193

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 194 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 253

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R  P +++N     +  F  ED  L  Y+
Sbjct: 254 LAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQLEGYD 313

Query: 254 PHAAILAKVSV 264
           PH AI A ++V
Sbjct: 314 PHPAIKAPIAV 324


>gi|299537230|ref|ZP_07050533.1| thymidylate synthase [Lysinibacillus fusiformis ZC1]
 gi|298727471|gb|EFI68043.1| thymidylate synthase [Lysinibacillus fusiformis ZC1]
          Length = 325

 Score =  293 bits (749), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 148/318 (46%), Positives = 186/318 (58%), Gaps = 57/318 (17%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V  ELLWF+
Sbjct: 8   YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL +H   IWDEWA K                                     
Sbjct: 68  KGDTNIRYLLQHNNHIWDEWAFKKWVESDEYTGPDMTDFGRRCLVDESFNALYQKELASF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W   DG  +DQ+  ++  ++  P SRR IV+AW
Sbjct: 128 CERVLTDDDFAQQYGDLGNVYGKQWRHWTTSDGESLDQLQDVIHQIKHQPDSRRIIVNAW 187

Query: 134 NV-------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           N        A   K ALPPCH +FQFYV NGKLSCQL QRS D  LG PFNIASY+LLT 
Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVANGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246
           ++A   G + GEFIH++GD H+Y NH EQ   QLSR PR LP + INPN   +     ED
Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLSREPRNLPTLHINPNKASIFDIELED 307

Query: 247 FTLRSYEPHAAILAKVSV 264
            ++  Y+PH AI A ++V
Sbjct: 308 LSIEGYDPHPAIKAPIAV 325


>gi|257878008|ref|ZP_05657661.1| thymidylate synthase [Enterococcus faecium 1,230,933]
 gi|257881206|ref|ZP_05660859.1| thymidylate synthase [Enterococcus faecium 1,231,502]
 gi|257889793|ref|ZP_05669446.1| thymidylate synthase [Enterococcus faecium 1,231,410]
 gi|257892270|ref|ZP_05671923.1| thymidylate synthase [Enterococcus faecium 1,231,408]
 gi|258616504|ref|ZP_05714274.1| thymidylate synthase [Enterococcus faecium DO]
 gi|260559058|ref|ZP_05831244.1| thymidylate synthase [Enterococcus faecium C68]
 gi|293563409|ref|ZP_06677858.1| thymidylate synthase [Enterococcus faecium E1162]
 gi|293568067|ref|ZP_06679405.1| thymidylate synthase [Enterococcus faecium E1071]
 gi|294622290|ref|ZP_06701333.1| thymidylate synthase [Enterococcus faecium U0317]
 gi|257812236|gb|EEV40994.1| thymidylate synthase [Enterococcus faecium 1,230,933]
 gi|257816864|gb|EEV44192.1| thymidylate synthase [Enterococcus faecium 1,231,502]
 gi|257826153|gb|EEV52779.1| thymidylate synthase [Enterococcus faecium 1,231,410]
 gi|257828649|gb|EEV55256.1| thymidylate synthase [Enterococcus faecium 1,231,408]
 gi|260074815|gb|EEW63131.1| thymidylate synthase [Enterococcus faecium C68]
 gi|291589288|gb|EFF21098.1| thymidylate synthase [Enterococcus faecium E1071]
 gi|291598182|gb|EFF29280.1| thymidylate synthase [Enterococcus faecium U0317]
 gi|291604670|gb|EFF34155.1| thymidylate synthase [Enterococcus faecium E1162]
          Length = 315

 Score =  293 bits (749), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++   IWDEWA                                       
Sbjct: 65  KGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQSKLF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +  G+LG IYG QWR W   DG  IDQI  ++++++  P SRR IVSAW
Sbjct: 125 CEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKQVIEAIKKTPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R  P +++N     +  F  ED  L  Y+
Sbjct: 245 LAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQLEGYD 304

Query: 254 PHAAILAKVSV 264
           PH AI A ++V
Sbjct: 305 PHPAIKAPIAV 315


>gi|148544000|ref|YP_001271370.1| thymidylate synthase [Lactobacillus reuteri DSM 20016]
 gi|184153394|ref|YP_001841735.1| thymidylate synthase [Lactobacillus reuteri JCM 1112]
 gi|227364913|ref|ZP_03848958.1| thymidylate synthase [Lactobacillus reuteri MM2-3]
 gi|325682462|ref|ZP_08161979.1| thymidylate synthase [Lactobacillus reuteri MM4-1A]
 gi|172048237|sp|A5VJK9|TYSY_LACRD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148531034|gb|ABQ83033.1| thymidylate synthase [Lactobacillus reuteri DSM 20016]
 gi|183224738|dbj|BAG25255.1| thymidylate synthase [Lactobacillus reuteri JCM 1112]
 gi|227070060|gb|EEI08438.1| thymidylate synthase [Lactobacillus reuteri MM2-3]
 gi|324978301|gb|EGC15251.1| thymidylate synthase [Lactobacillus reuteri MM4-1A]
          Length = 320

 Score =  292 bits (748), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL+R+V+  G  + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV +  +  ELLW
Sbjct: 8   EQYLDLIRYVLANGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIRFLLQHKNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W    G+ IDQI++++Q ++  P SRR IVS
Sbjct: 128 AFCQRILEDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NH +Q   QL+R+P   P++I+      +  +   D  L  
Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307

Query: 252 YEPHAAILAKVSV 264
           Y    AI A V+V
Sbjct: 308 YTHEPAIKAPVAV 320


>gi|239631533|ref|ZP_04674564.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239525998|gb|EEQ64999.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 316

 Score =  292 bits (748), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 190/311 (61%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKVH+  +  ELLWFL
Sbjct: 6   YLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVHFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 66  RGDTNIRFLLQHKNHIWDEWAFEKWVTSPDYHGPDMTDFGHRSQKDPEFAASYREQMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q G+FIHT GD HLY NH +Q   QL+R+PR  P +++NP+  D+  F  +D  L +Y+
Sbjct: 246 LQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|126650266|ref|ZP_01722494.1| thymidylate synthase [Bacillus sp. B14905]
 gi|126592916|gb|EAZ86898.1| thymidylate synthase [Bacillus sp. B14905]
          Length = 325

 Score =  292 bits (748), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 147/318 (46%), Positives = 186/318 (58%), Gaps = 57/318 (17%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V  ELLWF+
Sbjct: 8   YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL +H   IWDEWA                                       
Sbjct: 68  KGDTNIRYLLQHNNHIWDEWAFKKWVESDDYTGPDMTDFGRRCLVDDAFNTLYQQELASF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K GELG +YG QWR W    G  IDQ+  ++  ++ +P SRR IV+AW
Sbjct: 128 CERVLADDDFAQKYGELGNVYGKQWRHWTTSTGESIDQLQDVIHQIKHNPDSRRIIVNAW 187

Query: 134 NV-------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           N        A   K ALPPCH +FQFYV NGKLSCQL QRS D  LG PFNIASY+LLT 
Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVSNGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246
           ++A   G + GEFIH++GD H+Y NH EQ   QL+R P+ LP + INPN   +     ED
Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLAREPKELPTLHINPNKASIFDIELED 307

Query: 247 FTLRSYEPHAAILAKVSV 264
            ++  Y+PH AI A ++V
Sbjct: 308 LSIEGYDPHPAIKAPIAV 325


>gi|227543427|ref|ZP_03973476.1| thymidylate synthase [Lactobacillus reuteri CF48-3A]
 gi|300910094|ref|ZP_07127554.1| thymidylate synthase [Lactobacillus reuteri SD2112]
 gi|227186579|gb|EEI66650.1| thymidylate synthase [Lactobacillus reuteri CF48-3A]
 gi|300892742|gb|EFK86102.1| thymidylate synthase [Lactobacillus reuteri SD2112]
          Length = 320

 Score =  292 bits (747), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL+R+V+  G  + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV +  +  ELLW
Sbjct: 8   EQYLDLIRYVLTNGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIRFLLQHKNHIWDEWAFKKWVESAEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W    G+ IDQI++++Q ++  P SRR IVS
Sbjct: 128 AFCQRILEDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NH +Q   QL+R+P   P++I+      +  +   D  L  
Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307

Query: 252 YEPHAAILAKVSV 264
           Y    AI A V+V
Sbjct: 308 YTYEPAIKAPVAV 320


>gi|1674210|gb|AAB96164.1| thymidylate synthase [Mycoplasma pneumoniae M129]
          Length = 328

 Score =  292 bits (747), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 139/293 (47%), Positives = 190/293 (64%), Gaps = 35/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL R+V++ G  R +RT       FGYQM FD+SK FPLLTTKKVHWKS+VHELL
Sbjct: 42  MQQYLDLARYVLEHGKYRPNRTDTAGIGVFGYQMHFDISKHFPLLTTKKVHWKSIVHELL 101

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL  + V+IW+EW                             A + G LG
Sbjct: 102 WFIKGDTNIKYLVDNKVNIWNEWPYESFKKSPHFNGESQKEFIERIRQDAKFAQQFGNLG 161

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR     D N +DQ+  ++  ++ +P+SRR IVS+WN   +D+M LPPCH L+Q
Sbjct: 162 PVYGKQWR-----DFNGVDQLKKVIAQIKVNPFSRRLIVSSWNPNEVDQMLLPPCHSLYQ 216

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV +G+LSCQLYQRSGD+FLGIPFNIASYSLL  ++A     + G F+HT+GD H+Y N
Sbjct: 217 FYVQDGQLSCQLYQRSGDIFLGIPFNIASYSLLVYLVAKETNLKPGSFVHTIGDAHIYEN 276

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ  LQL+R P+ LP++++  +   +  ++++D  L  Y+ H  I  +V+V
Sbjct: 277 HLEQIKLQLTRQPKPLPKVVLKSD-KSIFDYQFDDIELVDYDHHPTIKGEVAV 328


>gi|169828204|ref|YP_001698362.1| thymidylate synthase [Lysinibacillus sphaericus C3-41]
 gi|168992692|gb|ACA40232.1| Thymidylate synthase [Lysinibacillus sphaericus C3-41]
          Length = 325

 Score =  291 bits (746), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 147/318 (46%), Positives = 186/318 (58%), Gaps = 57/318 (17%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V  ELLWF+
Sbjct: 8   YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL +H   IWDEWA                                       
Sbjct: 68  KGDTNIRYLLQHNNHIWDEWAFKRWVESDDYTGPDMTDFGRRCLVDDAFNTMYQQELASF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K GELG +YG QWR W    G  IDQ+  ++  ++ +P SRR IV+AW
Sbjct: 128 CERVLADDDFAQKYGELGNVYGKQWRHWSTSTGESIDQLQDVIHQIKHNPDSRRIIVNAW 187

Query: 134 NV-------ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           N        A   K ALPPCH +FQFYV NGKLSCQL QRS D  LG PFNIASY+LLT 
Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVSNGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246
           ++A   G + GEFIH++GD H+Y NH EQ   QL+R P+ LP + INPN   +     ED
Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLAREPKDLPTLHINPNKTSIFDIELED 307

Query: 247 FTLRSYEPHAAILAKVSV 264
            ++  Y+PH AI A ++V
Sbjct: 308 LSIEGYDPHPAIKAPIAV 325


>gi|306818997|ref|ZP_07452714.1| thymidylate synthase [Mobiluncus mulieris ATCC 35239]
 gi|304648190|gb|EFM45498.1| thymidylate synthase [Mobiluncus mulieris ATCC 35239]
          Length = 266

 Score =  291 bits (746), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 137/263 (52%), Positives = 184/263 (69%), Gaps = 2/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DLLR +++ G  + DRTG GTRS F  Q+R+DLS+GFP +TTK ++W  VV ELLW
Sbjct: 6   HQYEDLLREILREGVPKDDRTGTGTRSLFARQLRYDLSQGFPAITTKSLYWHGVVGELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G++N ++L  + + IWDEWAD DG LGP+YG QWR+WP   G V DQI+ ++++L+ 
Sbjct: 66  FLQGNTNATWLQENNIHIWDEWADTDGNLGPVYGHQWRAWPTEAGTV-DQIAGLIETLKT 124

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV+ + +MAL PCH  FQ +V  G+LS Q+YQRS D+FLG+PFNIASY
Sbjct: 125 DPSSRRMVVSAWNVSDLPRMALAPCHMFFQCWVGAGRLSLQIYQRSCDMFLGVPFNIASY 184

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA   G + GE + T GD H+YNNH  Q   QLSR P   P +I++     +  
Sbjct: 185 ALLTHMLAQQSGLEVGELVWTGGDCHIYNNHVNQVQEQLSRDPYPFPTLILD-QAQSIDD 243

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + +E   L +Y+ H  I A V+V
Sbjct: 244 YTFEMIRLENYQHHPRISAPVAV 266


>gi|330684989|gb|EGG96664.1| thymidylate synthase [Staphylococcus epidermidis VCU121]
          Length = 318

 Score =  291 bits (746), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   ++  G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILNIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIKYLLQYNNNIWNEWAFENYINSEDYHGPDMTNFGHRSLQDSEFNELYKAEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D DGN  DQ+ ++++ ++  P SRRHIVSAW
Sbjct: 129 KENILNDDAFAQKYGDLGNVYGKQWRDWEDKDGNHFDQLKTVIEQIKQHPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +  + QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHMDAVETQLSRDSFNPPQIKINTD-KSIFDIEYEDIELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|331701412|ref|YP_004398371.1| Thymidylate synthase [Lactobacillus buchneri NRRL B-30929]
 gi|329128755|gb|AEB73308.1| Thymidylate synthase [Lactobacillus buchneri NRRL B-30929]
          Length = 316

 Score =  291 bits (746), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R+V++ G  + DRT  GT STFGYQMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLARYVLENGHKKTDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  KGDTNIQFLLKHKNHIWDEWAFEKFVASNDYTGPDMTDFSHRAQKDPEFNKVYQEQKMLF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IVSAW
Sbjct: 126 CDRIVNDDDFAKKYGDLGLVYGSQWRAWKTSTGGTIDQIQNVIDLIKTHPDSRRMIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV++GKLSCQLYQRSGD+FLG+P+NIASY+LLT M+A   G
Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSCQLYQRSGDIFLGVPYNIASYALLTSMIARECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + G+F+HT GD H+Y NH +Q +  LSR PR  P++ +NP    L  F   D  +++Y+
Sbjct: 246 LEVGDFVHTFGDAHIYLNHIDQVEELLSRKPRQAPELWLNPEKKHLDEFEMADIKVKNYD 305

Query: 254 PHAAILAKVSV 264
           P+  I A V+V
Sbjct: 306 PYPVIKAPVAV 316


>gi|241889739|ref|ZP_04777037.1| thymidylate synthase [Gemella haemolysans ATCC 10379]
 gi|241863361|gb|EER67745.1| thymidylate synthase [Gemella haemolysans ATCC 10379]
          Length = 310

 Score =  291 bits (745), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 143/312 (45%), Positives = 197/312 (63%), Gaps = 56/312 (17%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL L  H+++ G ++ DRTGVGT+S FGYQM+F+LS+GFPLLTTKKV++  V  ELLWF
Sbjct: 5   EYLKLCNHILENGIEKEDRTGVGTKSIFGYQMKFNLSEGFPLLTTKKVNFNLVWSELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD----------------------------------- 87
           ++GD+N+ +L  +  +IW+EWA K                                    
Sbjct: 65  IKGDTNIKFLLENKNNIWNEWAFKKWIESDEYTGPDMTDFGHRTLVDEKFSKQYKEQMTI 124

Query: 88  ---------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                          G+LG +YG QWR     D N IDQ+ ++V+ ++ +P SRR IVS+
Sbjct: 125 FKERILSDEEFSKKFGDLGNVYGKQWR-----DFNGIDQLKNVVEQIKTNPSSRRLIVSS 179

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN A +D MALPPCH LFQFYV++GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A   
Sbjct: 180 WNPAEVDTMALPPCHSLFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKEC 239

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEF+HTLGD H+Y NHF+Q   Q+SR+P +LP++ +  +   +   + ED  + +Y
Sbjct: 240 GLEVGEFVHTLGDAHIYKNHFDQVKEQMSRTPYSLPELKVK-DFESIFDLKIEDVEIVNY 298

Query: 253 EPHAAILAKVSV 264
           E H  I A ++V
Sbjct: 299 ESHPFIKAPIAV 310


>gi|169351012|ref|ZP_02867950.1| hypothetical protein CLOSPI_01789 [Clostridium spiroforme DSM 1552]
 gi|169292074|gb|EDS74207.1| hypothetical protein CLOSPI_01789 [Clostridium spiroforme DSM 1552]
          Length = 295

 Score =  291 bits (745), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 135/298 (45%), Positives = 189/298 (63%), Gaps = 37/298 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL++ ++V++ G DR DRTG GTRS FGYQ R+DL  GFPL+TTKK+  + +  ELL
Sbjct: 1   MKQYLEMCKYVLENGEDRSDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFIRPIAEELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------ADKD--------------------------G 88
           WF++GD+N+ YL    V IW+EW        KD                          G
Sbjct: 61  WFIKGDTNIKYLVDRNVKIWNEWPYENYKKSKDYQGETIEEFIEKIKNLPEDDSFVLKYG 120

Query: 89  ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           +LGP+YG QWR++ +Y+G  +DQ++ +V SL+ DP+SRRHI+ AWN A +D M LPPCH 
Sbjct: 121 DLGPVYGAQWRNF-NYEG--VDQLAKLVDSLKNDPFSRRHIICAWNPAQVDNMTLPPCHA 177

Query: 149 LFQFYV--DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206
             QFYV  D   LSCQLYQRS D+FLG+PFNIASY+L+  MLA   G++  EF+HT+GD 
Sbjct: 178 FLQFYVSADKKYLSCQLYQRSADIFLGVPFNIASYALMVEMLARTCGYEAKEFVHTIGDA 237

Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H+Y +HF+    QL R P    ++++NP +  +  ++ ED  +  Y+ +  ++ KVSV
Sbjct: 238 HIYKDHFDVVKQQLERKPLPKCKLVLNPEVKSIFDYKIEDIKIEDYQSYGKLVGKVSV 295


>gi|161723289|ref|NP_110008.2| thymidylate synthase [Mycoplasma pneumoniae M129]
 gi|2501428|sp|P78029|TYSY_MYCPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|301633474|gb|ADK87028.1| thymidylate synthase [Mycoplasma pneumoniae FH]
          Length = 287

 Score =  291 bits (745), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 139/293 (47%), Positives = 190/293 (64%), Gaps = 35/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL R+V++ G  R +RT       FGYQM FD+SK FPLLTTKKVHWKS+VHELL
Sbjct: 1   MQQYLDLARYVLEHGKYRPNRTDTAGIGVFGYQMHFDISKHFPLLTTKKVHWKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL  + V+IW+EW                             A + G LG
Sbjct: 61  WFIKGDTNIKYLVDNKVNIWNEWPYESFKKSPHFNGESQKEFIERIRQDAKFAQQFGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR     D N +DQ+  ++  ++ +P+SRR IVS+WN   +D+M LPPCH L+Q
Sbjct: 121 PVYGKQWR-----DFNGVDQLKKVIAQIKVNPFSRRLIVSSWNPNEVDQMLLPPCHSLYQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV +G+LSCQLYQRSGD+FLGIPFNIASYSLL  ++A     + G F+HT+GD H+Y N
Sbjct: 176 FYVQDGQLSCQLYQRSGDIFLGIPFNIASYSLLVYLVAKETNLKPGSFVHTIGDAHIYEN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ  LQL+R P+ LP++++  +   +  ++++D  L  Y+ H  I  +V+V
Sbjct: 236 HLEQIKLQLTRQPKPLPKVVLKSD-KSIFDYQFDDIELVDYDHHPTIKGEVAV 287


>gi|227510321|ref|ZP_03940370.1| thymidylate synthase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227189973|gb|EEI70040.1| thymidylate synthase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 317

 Score =  291 bits (745), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L ++V++ G  + DRT  GT STFGYQMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 7   YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 67  RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYTGPDMTNFSHRAQEDPDFNNLYQEQKKRF 126

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IVSAW
Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV++GKLSCQLYQRSGD+FLG+PFNIASY+LLT ++A    
Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGVPFNIASYALLTSLIARECH 246

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEF+HTLGD H+Y NH EQ   QLSR P   PQ+ +NP    L  F   D  +++Y+
Sbjct: 247 LQPGEFVHTLGDAHIYLNHVEQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306

Query: 254 PHAAILAKVSV 264
           P+ +I A V+V
Sbjct: 307 PYPSIKAPVAV 317


>gi|227524472|ref|ZP_03954521.1| thymidylate synthase [Lactobacillus hilgardii ATCC 8290]
 gi|227088342|gb|EEI23654.1| thymidylate synthase [Lactobacillus hilgardii ATCC 8290]
          Length = 317

 Score =  291 bits (745), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L ++V++ G  + DRT  GT STFGYQMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 7   YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 67  RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYIGPDMTNFSHRAQENPDFNDLYQEQKKRF 126

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IVSAW
Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV++GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A    
Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGIPFNIASYALLTSLIARECN 246

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEF+HTLGD H+Y NH +Q   QLSR P   PQ+ +NP    L  F   D  +++Y+
Sbjct: 247 LQPGEFVHTLGDAHIYLNHVKQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306

Query: 254 PHAAILAKVSV 264
           P+ +I A V+V
Sbjct: 307 PYPSIKAPVAV 317


>gi|323339894|ref|ZP_08080163.1| thymidylate synthase [Lactobacillus ruminis ATCC 25644]
 gi|323092767|gb|EFZ35370.1| thymidylate synthase [Lactobacillus ruminis ATCC 25644]
          Length = 319

 Score =  291 bits (744), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+R ++  G  + DRT  GT S FGYQMRFDL KGFPLLTTKKV    +  ELLWFL
Sbjct: 9   YLQLIRDILDHGHRKDDRTKTGTISLFGYQMRFDLGKGFPLLTTKKVPLGLIKSELLWFL 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ YL +H   IWDEWA                                       
Sbjct: 69  NGDTNIQYLLKHKNHIWDEWAFKKWVESDEYEGPDMTDFGLRCQKDPEFDKVYREQMKLF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W   +G  IDQI ++++ ++ +P SRR IV+AW
Sbjct: 129 CDRMVNDDEFAKKYGDLGNVYGAQWRHWKTSNGETIDQIKNVIEEIKTNPDSRRLIVTAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV+NGKLSCQLYQRSGDVFLG+PFNIASYSLLT ++A   G
Sbjct: 189 NPEDVPTSALPPCHSLFQFYVNNGKLSCQLYQRSGDVFLGVPFNIASYSLLTHLIARECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y+NH EQ   QL R+P+  P + +NP    L  F  +D  +  Y+
Sbjct: 249 LEVGEFVHTLGDAHIYSNHIEQVKEQLKRTPKKAPTLWLNPEKKHLEDFDVDDIKVIDYD 308

Query: 254 PHAAILAKVSV 264
           P  AI A V+V
Sbjct: 309 PAPAIKAPVAV 319


>gi|227513328|ref|ZP_03943377.1| thymidylate synthase [Lactobacillus buchneri ATCC 11577]
 gi|227083201|gb|EEI18513.1| thymidylate synthase [Lactobacillus buchneri ATCC 11577]
          Length = 317

 Score =  290 bits (742), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L ++V++ G  + DRT  GT STFGYQMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 7   YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 67  RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYIGPDMTNFSHRAQEDPDFNDLYQEQKKRF 126

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IVSAW
Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV++GKLSCQLYQRSGD+FLG+PFNIASY+LLT ++A    
Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGVPFNIASYALLTSLIARECN 246

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEF+HTLGD H+Y NH +Q   QLSR P   PQ+ +NP    L  F   D  +++Y+
Sbjct: 247 LQPGEFVHTLGDAHIYLNHVKQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306

Query: 254 PHAAILAKVSV 264
           P+ +I A V+V
Sbjct: 307 PYPSIKAPVAV 317


>gi|319892428|ref|YP_004149303.1| Thymidylate synthase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162124|gb|ADV05667.1| Thymidylate synthase [Staphylococcus pseudintermedius HKU10-03]
          Length = 317

 Score =  290 bits (742), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 189/311 (60%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL + +++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  EL+WF+
Sbjct: 8   YHDLCKEILEIGNQRDDRTATGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELIWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ YL ++  +IW+EWA                                       
Sbjct: 68  RGDTNLRYLLQYNNNIWNEWAFEKYVQSEDYTGPDMTDFGHRAQSDAAFAETYREEMTKF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W   DG   DQ+ ++++ ++A+P SRRHI+SAW
Sbjct: 128 KQQILTDDDFMKKHGDLGNVYGKQWRNWVSADGQQYDQLKALIEQIKANPNSRRHIISAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I+ MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIASYSLLT ++A   G
Sbjct: 188 NPTEIETMALPPCHTLFQFYVQDNKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKECG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+RS    P++ IN +   +    YED  + +YE
Sbjct: 248 LEVGEFVHTFGDAHIYSNHLDAVKTQLARSSFAPPELKINTD-RSIFDIEYEDLEIVNYE 306

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 307 SHPAIKAPIAV 317


>gi|304385033|ref|ZP_07367379.1| thymidylate synthase [Pediococcus acidilactici DSM 20284]
 gi|304329227|gb|EFL96447.1| thymidylate synthase [Pediococcus acidilactici DSM 20284]
          Length = 323

 Score =  290 bits (742), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R+V++ G  + DRT  GT STFGYQMRFDLS+GFPLLTTK+V +  +  EL+W
Sbjct: 11  EQYLNLERYVLENGHQKSDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELMW 70

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------DKD---------- 87
           FL+GD+N+ YL +H   IWDEWA                        D D          
Sbjct: 71  FLKGDTNIRYLLQHKNHIWDEWAFKKWVESAEYDGPDMTNFGHRSLIDSDFNAQYQVQKD 130

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IV+
Sbjct: 131 RFTKLILEDDAFAAKYGDLGNVYGSQWRAWKTSTGETIDQIENVIDLIKNHPDSRRMIVT 190

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLT M+A  
Sbjct: 191 AWNPEDVPTAALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGVPFNIASYALLTAMIAKT 250

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y+NH  Q   QL+R PR  P++  N    ++  +   D  +  
Sbjct: 251 CGLEVGEFVHTLGDAHIYSNHIAQVKEQLTRDPRPAPRLKFNQVHENIFDYEPADIVVEG 310

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 311 YDPHPAIKAPVAV 323


>gi|308180682|ref|YP_003924810.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308046173|gb|ADN98716.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 316

 Score =  290 bits (742), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
            GD+N+ YL +H   IWDEWA K+                                    
Sbjct: 66  HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFASIYQAQMQTF 125

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W    G  IDQI+++++ ++  P SRR IVSAW
Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD H+Y NH EQ   QL+R PR  PQ+ ++     +  ++  D  L  Y+
Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305

Query: 254 PHAAILAKVSV 264
           P  AI A V++
Sbjct: 306 PAPAIKAPVAI 316


>gi|254556739|ref|YP_003063156.1| thymidylate synthase [Lactobacillus plantarum JDM1]
 gi|254045666|gb|ACT62459.1| thymidylate synthase [Lactobacillus plantarum JDM1]
          Length = 316

 Score =  290 bits (742), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
            GD+N+ YL +H   IWDEWA K+                                    
Sbjct: 66  HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFAPIYQAQIQAF 125

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W    G  IDQI+++++ ++  P SRR IVSAW
Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD H+Y NH EQ   QL+R PR  PQ+ ++     +  ++  D  L  Y+
Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305

Query: 254 PHAAILAKVSV 264
           P  AI A V++
Sbjct: 306 PAPAIKAPVAI 316


>gi|227875722|ref|ZP_03993850.1| thymidylate synthase [Mobiluncus mulieris ATCC 35243]
 gi|269976729|ref|ZP_06183705.1| thymidylate synthase [Mobiluncus mulieris 28-1]
 gi|307700267|ref|ZP_07637307.1| thymidylate synthase [Mobiluncus mulieris FB024-16]
 gi|227843664|gb|EEJ53845.1| thymidylate synthase [Mobiluncus mulieris ATCC 35243]
 gi|269935094|gb|EEZ91652.1| thymidylate synthase [Mobiluncus mulieris 28-1]
 gi|307614478|gb|EFN93707.1| thymidylate synthase [Mobiluncus mulieris FB024-16]
          Length = 266

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 136/263 (51%), Positives = 184/263 (69%), Gaps = 2/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DLLR +++ G  + DRTG GTRS F  Q+R+DLS+GFP +TTK ++W  VV ELLW
Sbjct: 6   HQYEDLLREILREGVPKDDRTGTGTRSLFARQLRYDLSQGFPAITTKSLYWHGVVGELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G++N ++L  + + IWDEWAD DG LGP+YG QWR+WP   G V DQI+ ++++L+ 
Sbjct: 66  FLQGNTNATWLQENNIHIWDEWADTDGNLGPVYGHQWRAWPTEAGTV-DQIAGLIETLKT 124

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV+ + +MAL PCH  FQ +V  G+LS Q+YQRS D+FLG+PFNIASY
Sbjct: 125 DPSSRRMVVSAWNVSDLPRMALAPCHMFFQCWVGAGRLSLQIYQRSCDMFLGVPFNIASY 184

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA   G + GE + T GD H+YNNH  Q   QLSR P   P +I++     +  
Sbjct: 185 ALLTHMLAQQSGLEVGELVWTGGDCHIYNNHVNQVQEQLSRDPYPFPTLILD-QAQSIDD 243

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + ++   L +Y+ H  I A V+V
Sbjct: 244 YTFDMIRLENYQHHPRISAPVAV 266


>gi|28378525|ref|NP_785417.1| thymidylate synthase [Lactobacillus plantarum WCFS1]
 gi|300767470|ref|ZP_07077382.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|38258752|sp|Q88W05|TYSY_LACPL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|28271361|emb|CAD64266.1| thymidylate synthase [Lactobacillus plantarum WCFS1]
 gi|300495289|gb|EFK30445.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
          Length = 316

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
            GD+N+ YL +H   IWDEWA K+                                    
Sbjct: 66  HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFAPIYQAQMQTF 125

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W    G  IDQI+++++ ++  P SRR IVSAW
Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD H+Y NH EQ   QL+R PR  PQ+ ++     +  ++  D  L  Y+
Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305

Query: 254 PHAAILAKVSV 264
           P  AI A V++
Sbjct: 306 PAPAIKAPVAI 316


>gi|237733928|ref|ZP_04564409.1| thymidylate synthase [Mollicutes bacterium D7]
 gi|229383009|gb|EEO33100.1| thymidylate synthase [Coprobacillus sp. D7]
          Length = 286

 Score =  289 bits (740), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 133/289 (46%), Positives = 186/289 (64%), Gaps = 34/289 (11%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           + ++V++ G +R DRTG GTRS FGYQ R+DL  GFPL+TTKK+  + +  ELLWF++GD
Sbjct: 1   MCKYVLENGENREDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFLRPIAEELLWFIKGD 60

Query: 67  SNVSYLHRHGVSIWDEW-----------------------------ADKDGELGPIYGVQ 97
           +N+ YL    V IW+EW                             A K G+LGP+YG Q
Sbjct: 61  TNIKYLVDRNVKIWNEWPYEDFKKSPDFNGETIEEFVEKIKTDDEFAKKHGDLGPVYGAQ 120

Query: 98  WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--D 155
           WR + +Y+G  +DQ++ +V SL  +P+SRRHI+ AWN A +D MALPPCH   QFYV  D
Sbjct: 121 WRDF-NYEG--VDQLAKLVDSLTNNPFSRRHIICAWNPAQVDNMALPPCHAFLQFYVSAD 177

Query: 156 NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
              LSCQLYQRS D+FLG+PFNIASY+L+T MLA   G++  EFIHT+GD H+Y +HFE 
Sbjct: 178 KKYLSCQLYQRSADIFLGVPFNIASYALMTEMLARTCGYEAKEFIHTIGDAHIYKDHFEV 237

Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              Q++R P    ++++NP++  +  ++ ED  +  Y+ H  ++ KVSV
Sbjct: 238 VKQQIAREPLPKCKLVLNPDVKSIFDYKIEDIKIEDYQSHGKLVGKVSV 286


>gi|326432420|gb|EGD77990.1| thymidylate synthase [Salpingoeca sp. ATCC 50818]
          Length = 293

 Score =  289 bits (740), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 137/283 (48%), Positives = 187/283 (66%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           H+YL L++ ++  G  R DRTG GT S FG QMRF L +GFPLLTTK+V W+ V+ ELLW
Sbjct: 11  HEYLRLVQRILDTGKTRSDRTGTGTISLFGAQMRFSLREGFPLLTTKRVFWRGVLEELLW 70

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+ GD+N ++L    V IWD    K+            G+LGP+YG QWR +        
Sbjct: 71  FIAGDTNANHLAEKKVHIWDANGSKEFLEQRGLGHREEGDLGPVYGFQWRHFGAQYTDMH 130

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQI+++++ ++ +P SRR I+SAWN   +  MALPPCH L QFYV +G+LSC
Sbjct: 131 ADYQGKGVDQIANVIEQIKTNPDSRRIIMSAWNPVDLPHMALPPCHVLAQFYVQDGELSC 190

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT+M+A V G + G+F+HT+GD H+Y+NH +    QL+
Sbjct: 191 QLYQRSADMGLGVPFNIASYSLLTVMIAHVCGLRPGDFVHTIGDAHVYSNHVDALKEQLT 250

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P + I  ++  +  F+ EDF L  Y+PH  I  K++V
Sbjct: 251 REPRPFPTLNIKRDVTSIDDFKAEDFELVGYKPHGKIAMKMAV 293


>gi|191638380|ref|YP_001987546.1| thymidylate synthase [Lactobacillus casei BL23]
 gi|190712682|emb|CAQ66688.1| Thymidylate synthase (TS) (TSase) [Lactobacillus casei BL23]
 gi|327382408|gb|AEA53884.1| Thymidylate synthase [Lactobacillus casei LC2W]
 gi|327385609|gb|AEA57083.1| Thymidylate synthase [Lactobacillus casei BD-II]
          Length = 316

 Score =  289 bits (740), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 189/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVRFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 66  RGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q G+FIHT GD HLY NH +Q   QL+R+PR  P +++NP+  D+  F  +D  L +Y+
Sbjct: 246 LQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|314933617|ref|ZP_07840982.1| thymidylate synthase [Staphylococcus caprae C87]
 gi|313653767|gb|EFS17524.1| thymidylate synthase [Staphylococcus caprae C87]
          Length = 318

 Score =  289 bits (739), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYVNSEDYQGPDMTNFGHRSQEDPEFNEQYKKEMKKF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KERILNDDEFARQYGDLGNVYGKQWRDWEDKDGNHYDQLKTVIEQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I+ MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIETMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH    + QLSR     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHMSAIETQLSRESYKAPTLQINSD-KSIFDINYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|330967045|gb|EGH67305.1| thymidylate synthase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 277

 Score =  289 bits (739), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 137/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V++ G+ + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+
Sbjct: 1   MKSYLDLLGDVLENGAQKGDRTGTGTISVFGRQFRHDLSKGFPLLTTKKLHFKSIVNELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV +L+ +GV IW+EWA ++G+LGP+YG QW +WP  DG  I+QI  +V +L+
Sbjct: 61  WFLGGDTNVKWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              KMALPPCH L+QFYV + KLS  L+ RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENARQGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+P+N AS + LT MLA       GE + +L DVH+Y+NH EQ   QL+R PR L
Sbjct: 181 SDTFLGLPYNTASLACLTHMLAQQCDLDVGEIVISLSDVHIYSNHMEQVKTQLTREPRQL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +      +  +++EDF +  Y+PH  I A VS+
Sbjct: 241 PELKLLRKPASIYDYKFEDFEVVGYDPHPHIAAPVSI 277


>gi|308799723|ref|XP_003074642.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 /
           DHFR-TS (ISS) [Ostreococcus tauri]
 gi|116000813|emb|CAL50493.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 /
           DHFR-TS (ISS) [Ostreococcus tauri]
          Length = 751

 Score =  289 bits (739), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 133/283 (46%), Positives = 184/283 (65%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYLD++R +I  G+ + DRTG GT STFG QMRFDL + FPLLTTK+V W+ V  ELLW
Sbjct: 469 HQYLDMIREIIDQGAVKGDRTGTGTISTFGNQMRFDLRRSFPLLTTKRVFWRGVAEELLW 528

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+ G++N + L    ++IWD    ++            G+LGP+YG QWR +        
Sbjct: 529 FVAGETNANKLAEKKINIWDGNGSREYLDSIGLTEREVGDLGPVYGFQWRHFGAEYTNMH 588

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++ +P  RR +++AWN A + +MALPPCH   QFYV NG+LSC
Sbjct: 589 ADYTGKGVDQLAEVINKIKNNPTDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSC 648

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V   + G+F+H  GD H+Y+NH E    QL+
Sbjct: 649 QMYQRSCDMGLGVPFNIASYSLLTCMIAQVCDLKPGDFVHVCGDTHVYSNHVEPLKKQLT 708

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             PR  P + INP   D+ SF ++DF +  Y+PH  I  K++V
Sbjct: 709 CEPRPFPILKINPEKKDIDSFTFDDFEIIGYDPHPKIEMKMAV 751


>gi|282916694|ref|ZP_06324452.1| thymidylate synthase [Staphylococcus aureus subsp. aureus D139]
 gi|283770498|ref|ZP_06343390.1| thymidylate synthase [Staphylococcus aureus subsp. aureus H19]
 gi|282319181|gb|EFB49533.1| thymidylate synthase [Staphylococcus aureus subsp. aureus D139]
 gi|283460645|gb|EFC07735.1| thymidylate synthase [Staphylococcus aureus subsp. aureus H19]
          Length = 318

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 187/311 (60%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  + +YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVNYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|116494873|ref|YP_806607.1| thymidylate synthase [Lactobacillus casei ATCC 334]
 gi|122263709|sp|Q039F7|TYSY_LACC3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116105023|gb|ABJ70165.1| thymidylate synthase [Lactobacillus casei ATCC 334]
          Length = 316

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 189/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 66  RGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q G+FIHT GD HLY NH +Q   QL+R+PR  P +++NP+  D+  F  +D  L +Y+
Sbjct: 246 LQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|332686569|ref|YP_004456343.1| thymidylate synthase [Melissococcus plutonius ATCC 35311]
 gi|332370578|dbj|BAK21534.1| thymidylate synthase [Melissococcus plutonius ATCC 35311]
          Length = 315

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L R ++  G  + DRTG GT S FGYQMRF+LS GFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGREILTNGEAKEDRTGTGTLSIFGYQMRFNLSTGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ +L  +   IWDEWA                                       
Sbjct: 65  KGDTNIRFLLENNNHIWDEWAFERYTKSPDYIGPDMTNFGQRVLTDSKFSEIYQEQHQLF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       + GELG IYG QWR W    G  IDQ++ +++ ++  P SRR IVSAW
Sbjct: 125 CNKILTDDEFAQQYGELGNIYGAQWRRWQTKSGKFIDQLTQVIEMIKKTPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  MALPPCH LFQFYV + KLSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEEIPSMALPPCHTLFQFYVSHNKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GDVHLY NH +Q + QL+R P+ LP +++N     +  F   D  + +Y+
Sbjct: 245 LEVGEFVHTFGDVHLYKNHIDQMNEQLTRKPKQLPTLVLNTTKTSIFDFDMADIKVENYQ 304

Query: 254 PHAAILAKVSV 264
           P+ AI A ++V
Sbjct: 305 PYPAIKAPIAV 315


>gi|322639437|gb|EFY36125.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
          Length = 220

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 128/220 (58%), Positives = 167/220 (75%)

Query: 45  LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY 104
           +TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  
Sbjct: 1   MTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTP 60

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           DG  IDQI++++  L+ DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLY
Sbjct: 61  DGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLY 120

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR P
Sbjct: 121 QRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREP 180

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R LP+++I      L  +R++DF +  Y+PH  I A V++
Sbjct: 181 RALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 220


>gi|81428612|ref|YP_395612.1| thymidylate synthase [Lactobacillus sakei subsp. sakei 23K]
 gi|123755841|sp|Q38WX8|TYSY_LACSS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|78610254|emb|CAI55303.1| Thymidylate synthase [Lactobacillus sakei subsp. sakei 23K]
          Length = 316

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R +++ G  + DRT  GT S FGYQMRF+L +GFPLLTTKK+ +  +  ELLWFL
Sbjct: 6   YLDLARTILEEGHYKGDRTNTGTYSLFGYQMRFNLQEGFPLLTTKKMPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA------------------------DKD------------ 87
           +GDSN+ YL +H   IWDEWA                        D D            
Sbjct: 66  KGDSNIRYLLQHNNHIWDEWAFERFVKSTDYTGPDMTDFSHRAQDDADFKVVYQEQMRLF 125

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         GELG IYG QWR+W    G  IDQI ++++ ++ +P SRR IVSAW
Sbjct: 126 NDRILADEGFAKQYGELGDIYGKQWRAWQTRSGETIDQIKNVIEMIKTNPDSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV++GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y+NH  Q   QL+RS    P++ +NP+   +  F   D  + +YE
Sbjct: 246 LEVGEFIHTLGDAHIYSNHVTQVKTQLARSMHAAPKLWLNPDKKSIFDFDVADIKVENYE 305

Query: 254 PHAAILAKVSV 264
              AI A V+V
Sbjct: 306 SEPAIKAPVAV 316


>gi|323464469|gb|ADX76622.1| thymidylate synthase [Staphylococcus pseudintermedius ED99]
          Length = 317

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 140/311 (45%), Positives = 188/311 (60%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL + +++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  EL+WF+
Sbjct: 8   YHDLCKEILEIGNQRDDRTATGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELIWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ YL ++  +IW+EWA                                       
Sbjct: 68  RGDTNLRYLLQYNNNIWNEWAFEKYVQSEDYTGPDMTDFGHRAQSDAAFAETYREEMTKF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W   DG   DQ+ ++++ ++ +P SRRHI+SAW
Sbjct: 128 KQQILTDDDFMKKHGDLGNVYGKQWRNWVSADGQQYDQLKALIEQIKTNPNSRRHIISAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I+ MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIASYSLLT ++A   G
Sbjct: 188 NPTEIETMALPPCHTLFQFYVQDNKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKECG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+RS    P++ IN +   +    YED  + +YE
Sbjct: 248 LEVGEFVHTFGDAHIYSNHLDAVKTQLARSSFAPPELKINTD-RSIFDIEYEDLEIVNYE 306

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 307 SHPAIKAPIAV 317


>gi|300871809|ref|YP_003786682.1| thymidylate synthase [Brachyspira pilosicoli 95/1000]
 gi|300689510|gb|ADK32181.1| thymidylate synthase [Brachyspira pilosicoli 95/1000]
          Length = 266

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 138/266 (51%), Positives = 181/266 (68%), Gaps = 2/266 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
           M  YL+LL+ V++ G D +DRTGVGTR  F  Q+RF       P++TTK+V  K V+ EL
Sbjct: 1   MKNYLELLKKVLEEGEDTKDRTGVGTRRIFAPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           LWFL+G +N+ +L  + V IWDEWAD  GELGP+YG QWR+W   +GN IDQIS++V +L
Sbjct: 61  LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNVVNTL 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNI 178
           R +P SRR+I++AWNV  IDKM LPPCH + QF+V+N G +   LYQRS D+FLG+PFNI
Sbjct: 121 RNNPTSRRNILNAWNVGEIDKMHLPPCHMMCQFFVNNEGGIITHLYQRSADLFLGVPFNI 180

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           +SY++LT +LA   G +  E I T GD H+YNNH EQ  LQLSR P      +      +
Sbjct: 181 SSYAILTRLLAMHSGLKASELIMTFGDAHIYNNHMEQVKLQLSREPYEQTTELFIEERPN 240

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           + S  YEDF L  Y+ H  I A+V+V
Sbjct: 241 IFSHVYEDFRLEGYKYHPTIKAEVAV 266


>gi|329731575|gb|EGG67937.1| thymidylate synthase [Staphylococcus epidermidis VCU144]
          Length = 318

 Score =  288 bits (738), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G LG +YG QWR W D +GN  DQ+ +++Q ++ +P SRRHIVSAW
Sbjct: 129 KERILNNDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKTVIQQIKNNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N A ID MALPPCH +FQFYV  GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPAEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLNINTD-KSIFDINYEDLELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|302333040|gb|ADL23233.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 318

 Score =  288 bits (737), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDNTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|242242714|ref|ZP_04797159.1| thymidylate synthase [Staphylococcus epidermidis W23144]
 gi|242233850|gb|EES36162.1| thymidylate synthase [Staphylococcus epidermidis W23144]
          Length = 318

 Score =  288 bits (737), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYVQSNDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G LG +YG QWR W D +GN  DQ+ S++Q ++ +P SRRHIVSAW
Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKNNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV  GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRESYLPPQLKINTD-KSIFDINYEDLELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|27468038|ref|NP_764675.1| thymidylate synthase [Staphylococcus epidermidis ATCC 12228]
 gi|33416238|ref|NP_877984.1| thymidylate synthase [Staphylococcus aureus]
 gi|42761440|ref|NP_976285.1| thymidylate synthase [Staphylococcus epidermidis]
 gi|57866926|ref|YP_188580.1| thymidylate synthase [Staphylococcus epidermidis RP62A]
 gi|57867484|ref|YP_189147.1| thymidylate synthase [Staphylococcus epidermidis RP62A]
 gi|221142630|ref|ZP_03567123.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|226464437|ref|YP_002790944.1| thymidylate synthase [Staphylococcus aureus]
 gi|227519931|ref|ZP_03949980.1| thymidylate synthase [Enterococcus faecalis TX0104]
 gi|251810861|ref|ZP_04825334.1| thymidylate synthase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876133|ref|ZP_06285000.1| thymidylate synthase [Staphylococcus epidermidis SK135]
 gi|282929387|ref|ZP_06336949.1| thymidylate synthase [Staphylococcus aureus A9765]
 gi|293366599|ref|ZP_06613276.1| thymidylate synthase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|302344744|ref|YP_003813114.1| thymidylate synthetase [Staphylococcus aureus]
 gi|59800406|sp|P0A0M5|TYSY_STAAU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901169|sp|Q5HMP6|TYSY_STAEQ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|82583715|sp|P0C0M5|TYSY_STAES RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|27315583|gb|AAO04717.1|AE016747_214 thymidylate synthase [Staphylococcus epidermidis ATCC 12228]
 gi|1762089|gb|AAC18954.1| ThyE [Staphylococcus epidermidis]
 gi|3676410|gb|AAC63226.1| thymidylate synthetase ThyE [Staphylococcus aureus]
 gi|13383308|dbj|BAB39485.1| thymidylate synthetase [Staphylococcus epidermidis]
 gi|33390922|gb|AAQ17128.1| thymidylate synthase [Staphylococcus aureus]
 gi|57637584|gb|AAW54372.1| thymidylate synthase [Staphylococcus epidermidis RP62A]
 gi|57638142|gb|AAW54930.1| thymidylate synthase [Staphylococcus epidermidis RP62A]
 gi|226434324|emb|CAR62446.1| thymidylate synthase ThyE [Staphylococcus aureus]
 gi|227072621|gb|EEI10584.1| thymidylate synthase [Enterococcus faecalis TX0104]
 gi|251805541|gb|EES58198.1| thymidylate synthase [Staphylococcus epidermidis BCM-HMP0060]
 gi|270299881|gb|ACZ68687.1| Thymidylate synthase [Staphylococcus aureus]
 gi|270300524|gb|ACZ69330.1| thymidylate synthase [Staphylococcus aureus]
 gi|281295158|gb|EFA87685.1| thymidylate synthase [Staphylococcus epidermidis SK135]
 gi|281334254|gb|ADA61338.1| Thymidylate synthase [Staphylococcus aureus]
 gi|282166683|gb|ADA80699.1| Thymidylate synthase [Staphylococcus aureus]
 gi|282591819|gb|EFB96873.1| thymidylate synthase [Staphylococcus aureus A9765]
 gi|291319368|gb|EFE59737.1| thymidylate synthase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|300492218|gb|ADK23693.1| thymidylate synthetase [Staphylococcus aureus]
 gi|302751821|gb|ADL65998.1| thymidylate synthase, ThyA_1 [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|329735174|gb|EGG71466.1| thymidylate synthase [Staphylococcus epidermidis VCU045]
 gi|329737184|gb|EGG73438.1| thymidylate synthase [Staphylococcus epidermidis VCU028]
          Length = 318

 Score =  288 bits (737), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G LG +YG QWR W D +GN  DQ+ S++Q ++ +P SRRHIVSAW
Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV  GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|319400786|gb|EFV89005.1| thymidylate synthase [Staphylococcus epidermidis FRI909]
          Length = 318

 Score =  288 bits (737), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYVQSADYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G LG +YG QWR W D +GN  DQ+ S++Q ++ +P SRRHIVSAW
Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKNNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV  GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRESYLPPQLKINTD-KSIFDINYEDLELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|298694721|gb|ADI97943.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED133]
          Length = 318

 Score =  288 bits (737), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYNEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVGYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|283470641|emb|CAQ49852.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ST398]
          Length = 318

 Score =  288 bits (737), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLELGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|49483618|ref|YP_040842.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|57650383|ref|YP_186311.1| thymidylate synthase [Staphylococcus aureus subsp. aureus COL]
 gi|82751018|ref|YP_416759.1| thymidylate synthase [Staphylococcus aureus RF122]
 gi|87160328|ref|YP_494017.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195159|ref|YP_499960.1| thymidylate synthase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221550|ref|YP_001332372.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509594|ref|YP_001575253.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142068|ref|ZP_03566561.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|257425491|ref|ZP_05601916.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428151|ref|ZP_05604549.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257430782|ref|ZP_05607164.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433541|ref|ZP_05609899.1| thymidylate synthase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436382|ref|ZP_05612429.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M876]
 gi|258422540|ref|ZP_05685448.1| thymidylate synthase [Staphylococcus aureus A9635]
 gi|258451086|ref|ZP_05699121.1| thymidylate synthase [Staphylococcus aureus A5948]
 gi|262050396|ref|ZP_06023236.1| thymidylate synthase [Staphylococcus aureus D30]
 gi|282904009|ref|ZP_06311897.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C160]
 gi|282905774|ref|ZP_06313629.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908744|ref|ZP_06316562.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911007|ref|ZP_06318809.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282914217|ref|ZP_06322004.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M899]
 gi|282919139|ref|ZP_06326874.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C427]
 gi|282924322|ref|ZP_06331996.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C101]
 gi|282927524|ref|ZP_06335141.1| thymidylate synthase [Staphylococcus aureus A9765]
 gi|283958192|ref|ZP_06375643.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024427|ref|ZP_06378825.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 132]
 gi|293501243|ref|ZP_06667094.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510204|ref|ZP_06668912.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M809]
 gi|293526798|ref|ZP_06671482.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M1015]
 gi|294850751|ref|ZP_06791469.1| thymidylate synthase [Staphylococcus aureus A9754]
 gi|295427938|ref|ZP_06820570.1| thymidylate synthase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297591097|ref|ZP_06949735.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MN8]
 gi|304380994|ref|ZP_07363651.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|56749740|sp|Q6GGY0|TYSY_STAAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901166|sp|Q5HFZ6|TYSY_STAAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123291799|sp|Q2FYK5|TYSY_STAA8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123763295|sp|Q2FH11|TYSY_STAA3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123768559|sp|Q2YY40|TYSY_STAAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172048885|sp|A6QGX8|TYSY_STAAE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036949|sp|A8Z406|TYSY_STAAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|49241747|emb|CAG40437.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|57284569|gb|AAW36663.1| thymidylate synthase [Staphylococcus aureus subsp. aureus COL]
 gi|82656549|emb|CAI80971.1| thymidylate synthase [Staphylococcus aureus RF122]
 gi|87126302|gb|ABD20816.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202717|gb|ABD30527.1| thymidylate synthase, putative [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374350|dbj|BAF67610.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368403|gb|ABX29374.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257271948|gb|EEV04086.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257274992|gb|EEV06479.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278910|gb|EEV09529.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281634|gb|EEV11771.1| thymidylate synthase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284664|gb|EEV14784.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M876]
 gi|257847297|gb|EEV71303.1| thymidylate synthase [Staphylococcus aureus A9635]
 gi|257861141|gb|EEV83954.1| thymidylate synthase [Staphylococcus aureus A5948]
 gi|259161515|gb|EEW46117.1| thymidylate synthase [Staphylococcus aureus D30]
 gi|269940922|emb|CBI49306.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TW20]
 gi|282313709|gb|EFB44102.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C101]
 gi|282316949|gb|EFB47323.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C427]
 gi|282322285|gb|EFB52609.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M899]
 gi|282324702|gb|EFB55012.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282327008|gb|EFB57303.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331066|gb|EFB60580.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282592064|gb|EFB97090.1| thymidylate synthase [Staphylococcus aureus A9765]
 gi|282595627|gb|EFC00591.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C160]
 gi|283790341|gb|EFC29158.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920356|gb|EFD97420.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096248|gb|EFE26509.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467148|gb|EFF09666.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M809]
 gi|294822391|gb|EFG38842.1| thymidylate synthase [Staphylococcus aureus A9754]
 gi|295128296|gb|EFG57930.1| thymidylate synthase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575983|gb|EFH94699.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MN8]
 gi|302751257|gb|ADL65434.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340470|gb|EFM06407.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312438170|gb|ADQ77241.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195323|gb|EFU25710.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315195862|gb|EFU26230.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140327|gb|EFW32184.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142672|gb|EFW34475.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323438443|gb|EGA96197.1| thymidylate synthase [Staphylococcus aureus O11]
 gi|323444081|gb|EGB01692.1| thymidylate synthase [Staphylococcus aureus O46]
 gi|329314104|gb|AEB88517.1| Thymidylate synthase [Staphylococcus aureus subsp. aureus T0131]
 gi|329730552|gb|EGG66938.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21189]
          Length = 318

 Score =  288 bits (737), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|15924417|ref|NP_371951.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927008|ref|NP_374541.1| thymidylate synthase [Staphylococcus aureus subsp. aureus N315]
 gi|21283046|ref|NP_646134.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486268|ref|YP_043489.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|148267914|ref|YP_001246857.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393977|ref|YP_001316652.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979746|ref|YP_001442005.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253315250|ref|ZP_04838463.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732066|ref|ZP_04866231.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733326|ref|ZP_04867491.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255006216|ref|ZP_05144817.2| thymidylate synthase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795518|ref|ZP_05644497.1| thymidylate synthase [Staphylococcus aureus A9781]
 gi|258413327|ref|ZP_05681603.1| thymidylate synthase [Staphylococcus aureus A9763]
 gi|258420567|ref|ZP_05683509.1| thymidylate synthase [Staphylococcus aureus A9719]
 gi|258434662|ref|ZP_05688736.1| thymidylate synthase [Staphylococcus aureus A9299]
 gi|258444762|ref|ZP_05693091.1| thymidylate synthase [Staphylococcus aureus A8115]
 gi|258447404|ref|ZP_05695548.1| thymidylate synthase [Staphylococcus aureus A6300]
 gi|258449245|ref|ZP_05697348.1| thymidylate synthase [Staphylococcus aureus A6224]
 gi|258454623|ref|ZP_05702587.1| thymidylate synthase [Staphylococcus aureus A5937]
 gi|269203049|ref|YP_003282318.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED98]
 gi|282892921|ref|ZP_06301156.1| thymidylate synthase [Staphylococcus aureus A8117]
 gi|282927952|ref|ZP_06335561.1| thymidylate synthase [Staphylococcus aureus A10102]
 gi|295406371|ref|ZP_06816178.1| thymidylate synthase [Staphylococcus aureus A8819]
 gi|296275287|ref|ZP_06857794.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207915|ref|ZP_06924348.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297244600|ref|ZP_06928483.1| thymidylate synthase [Staphylococcus aureus A8796]
 gi|300911999|ref|ZP_07129442.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH70]
 gi|54039797|sp|P67047|TYSY_STAAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54039798|sp|P67048|TYSY_STAAW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54042283|sp|P67046|TYSY_STAAM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|56749711|sp|Q6G9D4|TYSY_STAAS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231737|sp|A7X2B3|TYSY_STAA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036947|sp|A6U1P7|TYSY_STAA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036948|sp|A5ISV8|TYSY_STAA9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|13701225|dbj|BAB42520.1| thymidylate synthase [Staphylococcus aureus subsp. aureus N315]
 gi|14247198|dbj|BAB57589.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204485|dbj|BAB95182.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244711|emb|CAG43146.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|147740983|gb|ABQ49281.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946429|gb|ABR52365.1| Thymidylate synthase [Staphylococcus aureus subsp. aureus JH1]
 gi|156721881|dbj|BAF78298.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253724199|gb|EES92928.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728678|gb|EES97407.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257789490|gb|EEV27830.1| thymidylate synthase [Staphylococcus aureus A9781]
 gi|257839891|gb|EEV64359.1| thymidylate synthase [Staphylococcus aureus A9763]
 gi|257843515|gb|EEV67922.1| thymidylate synthase [Staphylococcus aureus A9719]
 gi|257849023|gb|EEV73005.1| thymidylate synthase [Staphylococcus aureus A9299]
 gi|257850255|gb|EEV74208.1| thymidylate synthase [Staphylococcus aureus A8115]
 gi|257853595|gb|EEV76554.1| thymidylate synthase [Staphylococcus aureus A6300]
 gi|257857233|gb|EEV80131.1| thymidylate synthase [Staphylococcus aureus A6224]
 gi|257863006|gb|EEV85770.1| thymidylate synthase [Staphylococcus aureus A5937]
 gi|262075339|gb|ACY11312.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED98]
 gi|282590249|gb|EFB95329.1| thymidylate synthase [Staphylococcus aureus A10102]
 gi|282764918|gb|EFC05043.1| thymidylate synthase [Staphylococcus aureus A8117]
 gi|285817105|gb|ADC37592.1| Thymidylate synthase [Staphylococcus aureus 04-02981]
 gi|294968959|gb|EFG44981.1| thymidylate synthase [Staphylococcus aureus A8819]
 gi|296887489|gb|EFH26389.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178630|gb|EFH37876.1| thymidylate synthase [Staphylococcus aureus A8796]
 gi|300886245|gb|EFK81447.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH70]
 gi|312829821|emb|CBX34663.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129137|gb|EFT85132.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329727369|gb|EGG63825.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21172]
 gi|329733414|gb|EGG69746.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21193]
          Length = 318

 Score =  288 bits (737), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYNGPDMTDFGHRALSDPEFNEQYKEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|148550243|ref|YP_001270345.1| thymidylate synthase [Pseudomonas putida F1]
 gi|166231726|sp|A5WAK1|TYSY_PSEP1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148514301|gb|ABQ81161.1| thymidylate synthase [Pseudomonas putida F1]
          Length = 277

 Score =  288 bits (737), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 138/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V++ GS + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+
Sbjct: 1   MKSYLDLLTDVLENGSVKGDRTGTGTISVFGRQYRHDLSKGFPLLTTKKLHFKSIVNELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ +L+ +GV IW+EWA ++G+LGP+YG QW +WP  DG  I+QI  +V +L+
Sbjct: 61  WFLSGDTNIKWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              KMALPPCH L+QFYV + KLS  L+ RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENAENGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+P+N AS + LT MLA       GE + +L DVH+Y+NH EQ   Q+SR PR L
Sbjct: 181 SDSFLGLPYNTASLACLTHMLAQQCDMGVGEIVISLSDVHIYSNHMEQVKTQISREPRKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +      +  +++EDF L  Y+PH  I A VS+
Sbjct: 241 PELKLLRKPESIYDYKFEDFELVGYDPHPHIAAPVSI 277


>gi|227535130|ref|ZP_03965179.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187175|gb|EEI67242.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 328

 Score =  288 bits (737), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 189/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 18  YLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSEGFPLLTTKKVPYGLIKSELLWFL 77

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 78  RGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMAKF 137

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 138 DERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVSAW 197

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 198 NPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 257

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q G+FIHT GD HLY NH +Q   QL+R+PR  P +++NP+  D+  F  +D  L +Y+
Sbjct: 258 LQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLNYD 317

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 318 PYPAIKAPVAV 328


>gi|270291285|ref|ZP_06197507.1| thymidylate synthase [Pediococcus acidilactici 7_4]
 gi|270280131|gb|EFA25967.1| thymidylate synthase [Pediococcus acidilactici 7_4]
          Length = 316

 Score =  288 bits (737), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 143/313 (45%), Positives = 185/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R+V++ G  + DRT  GT STFGYQMRFDLS+GFPLLTTK+V +  +  EL+W
Sbjct: 4   EQYLNLERYVLENGHQKSDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELMW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FL+GD+N+ YL +H   IWDEWA K                                   
Sbjct: 64  FLKGDTNIRYLLQHKNHIWDEWAFKKWVESAEYDGPDMTNFGHRSLIDSDFNAQYQVQKD 123

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IV+
Sbjct: 124 RFTKLILEDDAFAAKYGDLGNVYGSQWRAWKTSTGETIDQIENVIDLIKNHPDSRRMIVT 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLT M+A  
Sbjct: 184 AWNPEDVPTAALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGVPFNIASYALLTAMIAKT 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y+NH  Q   QL+R PR  P++  N    ++  +   D  +  
Sbjct: 244 CGLEVGEFVHTLGDAHIYSNHIAQVKEQLARDPRPAPRLKFNQVHENIFDYEPADIVVEG 303

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I A V+V
Sbjct: 304 YDPHPTIKAPVAV 316


>gi|304373440|ref|YP_003856649.1| Thymidylate synthase 2 [Mycoplasma hyorhinis HUB-1]
 gi|304309631|gb|ADM22111.1| Thymidylate synthase 2 [Mycoplasma hyorhinis HUB-1]
          Length = 286

 Score =  288 bits (736), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 141/293 (48%), Positives = 187/293 (63%), Gaps = 36/293 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+ LRH+++ G  + +RT V + +TFGYQMRFDLS+GFPL+TTKK ++ S+ HELL
Sbjct: 1   MRQYLEFLRHILQKGIKKTNRTIVDSINTFGYQMRFDLSEGFPLVTTKKTNFASIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL  + V+IW+EW                             A + GELG
Sbjct: 61  WFIKGDTNIKYLVDNNVNIWNEWPYENYKKSKEFQGESLKEFIVKIKENPSFAKQFGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++       +DQ+  ++Q ++ +P SRR IVSAWN   ID M LPPCH LFQ
Sbjct: 121 PVYGKQWRNFLG-----VDQLKKVIQEIKTNPNSRRLIVSAWNPLEIDSMLLPPCHSLFQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV N KLSCQLYQRS D FLG+PFNIASYSLL  M+A     + GEFIHT+GD H+Y N
Sbjct: 176 FYVANNKLSCQLYQRSADAFLGVPFNIASYSLLVFMIAQECELEVGEFIHTIGDAHIYVN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +Q +LQL+R P  LP++ I          ++ED  L  YE  + I  +V+V
Sbjct: 236 HIDQVNLQLTRIPHKLPKLKITKK--PFFDIQFEDLQLIDYEHDSFIKGEVAV 286


>gi|320533091|ref|ZP_08033824.1| thymidylate synthase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320134706|gb|EFW26921.1| thymidylate synthase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 297

 Score =  288 bits (736), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 141/263 (53%), Positives = 177/263 (67%), Gaps = 2/263 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL  V+  G+ + DRTG GTRS F  Q+R+DL +GFP +TTK V  K+V  ELLWFL
Sbjct: 35  YENLLADVLTNGTSKSDRTGTGTRSLFARQLRYDLGRGFPRITTKFVAMKAVKGELLWFL 94

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+NV +L   G++IWDEWAD  GELGP+YG QWRSWP  DG VIDQIS ++ +LR DP
Sbjct: 95  RGDTNVGWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGVIDQISGLIDTLRTDP 154

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +  MAL PCH  FQ Y   G+LS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 155 DSRRMLVSAWNVSELGSMALAPCHAFFQCYAAEGRLSLQIYQRSADLFLGVPFNIASYAL 214

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SF 242
           LT MLA     + GE I T GD H+Y+NH EQ   QLSR P   P   +     + + ++
Sbjct: 215 LTHMLAQQADLEPGELIWTGGDCHIYDNHVEQVRTQLSRVPSAHPFPTLRLERAESIDAY 274

Query: 243 RYEDF-TLRSYEPHAAILAKVSV 264
             +D    + YE H  I A V+V
Sbjct: 275 DMDDIDASQGYEHHPTIKAPVAV 297


>gi|116492833|ref|YP_804568.1| thymidylate synthase [Pediococcus pentosaceus ATCC 25745]
 gi|122265703|sp|Q03F96|TYSY_PEDPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116102983|gb|ABJ68126.1| thymidylate synthase [Pediococcus pentosaceus ATCC 25745]
          Length = 316

 Score =  288 bits (736), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R+V++ G  + DRT  GT STFGYQMRFDLS+GFPLLTTK+V +  +  ELLW
Sbjct: 4   EQYLNLERYVLENGHLKGDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FL+GD+N+ YL +H   IWDEWA K                                   
Sbjct: 64  FLKGDTNIRYLLQHNNHIWDEWAFKKWVESDEYQGPDMTDFGHRSLTDPEFNELYKIEKQ 123

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G+LG +YG QWR+W    G  IDQIS+++  ++ +P SRR IVS
Sbjct: 124 RFTEQILEDDTFSAKYGDLGNVYGSQWRAWKTSTGETIDQISNVIDMIKNNPNSRRMIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTSALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYALLTELIAKA 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT+GD H+Y+NH +Q   QL R+PR  P++        +  +   D  +  
Sbjct: 244 TGLEVGEFIHTIGDAHIYSNHLDQVKEQLERTPRPAPKLKFKQVHDSIFDYEPGDIVVEG 303

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I A V+V
Sbjct: 304 YDPHPTIKAPVAV 316


>gi|329945997|ref|ZP_08293684.1| thymidylate synthase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528445|gb|EGF55423.1| thymidylate synthase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 296

 Score =  287 bits (735), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 140/263 (53%), Positives = 177/263 (67%), Gaps = 2/263 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL  V+  G+ + DRTG GT S F  Q+R+DL++GFP +TTK V  K+V  ELLWFL
Sbjct: 34  YENLLADVLTNGALKSDRTGTGTHSLFARQLRYDLARGFPRITTKFVAMKAVKGELLWFL 93

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+NV +L   G++IWDEWAD  GELGP+YG QWRSWP  DG  IDQI+ ++ +LR DP
Sbjct: 94  RGDTNVRWLQERGITIWDEWADNAGELGPVYGSQWRSWPTCDGGAIDQIAGLINTLRTDP 153

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +  MAL PCH  FQ Y  +G+LS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 154 DSRRMLVSAWNVSDLSSMALAPCHAFFQCYAADGRLSLQIYQRSADLFLGVPFNIASYAL 213

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-PNIVDLLSF 242
           LT MLA   G   GE + T GD H+YNNH EQ   QLSR P   P   +       + ++
Sbjct: 214 LTHMLAQQAGLDPGELVWTGGDCHIYNNHVEQVRTQLSRVPSAYPFPTLRLERAASIDAY 273

Query: 243 RYEDF-TLRSYEPHAAILAKVSV 264
             +D    + YE H AI A V+V
Sbjct: 274 DMDDIDASQGYEHHPAIKAPVAV 296


>gi|145346608|ref|XP_001417778.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578006|gb|ABO96071.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 499

 Score =  287 bits (735), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 132/283 (46%), Positives = 186/283 (65%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++R +I  G+ + DRTG GT STFG QMRFDL + FPLLTTK+V W+ V  ELLW
Sbjct: 217 YQYLEMIREIIDQGAVKGDRTGTGTISTFGNQMRFDLRRSFPLLTTKRVFWRGVAEELLW 276

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+ G++N + L    ++IWD    ++            G+LGP+YG QWR +        
Sbjct: 277 FVAGETNANKLAEKKINIWDGNGSREYLDSIGLTEREVGDLGPVYGFQWRHFGAEYTNMH 336

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++ +P  RR +++AWN A + +MALPPCH   QFYV NG+LSC
Sbjct: 337 ADYTGKGVDQLAEVIHKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSC 396

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H  GD H+Y+NH E  + QL+
Sbjct: 397 QMYQRSCDMGLGVPFNIASYSLLTCMIAQVCGLKPGDFVHCCGDTHVYSNHVEPLEKQLA 456

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             PR  P + INP   D+ SF ++DF +  Y+PH  I  K++V
Sbjct: 457 CEPRPFPILKINPEKKDIDSFTFDDFEIVGYDPHPKIEMKMAV 499


>gi|315658331|ref|ZP_07911203.1| thymidylate synthase [Staphylococcus lugdunensis M23590]
 gi|315496660|gb|EFU84983.1| thymidylate synthase [Staphylococcus lugdunensis M23590]
          Length = 318

 Score =  287 bits (735), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL   ++  G ++ DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHDLCEDILAIGKNKDDRTQTGTVSKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL +H  +IW+EWA                                       
Sbjct: 69  KGDTNIRYLLQHNNNIWNEWAFEKYIKSSDYHGPDMTNFGHRSLVDDHFKAQYKEEMARF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D  GN  DQ+ ++++ ++  P SRRHI+SAW
Sbjct: 129 KENILIDDAFAKKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIEQIKTHPNSRRHIISAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N A +D MALPPCH +FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPAEVDTMALPPCHTMFQFYVQNGKLSCQLYQRSADIFLGVPFNIASYALLTHLVAKECD 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSRS    P + IN +   +    YED  L +Y+
Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAVHTQLSRSSFEPPTIRINTD-KSIFDISYEDIELINYQ 307

Query: 254 PHAAILAKVSV 264
            HAAI A ++V
Sbjct: 308 SHAAIKAPIAV 318


>gi|330899097|gb|EGH30516.1| thymidylate synthase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 277

 Score =  287 bits (735), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 136/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V++ G+ + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+
Sbjct: 1   MKSYLDLLGDVLENGAQKGDRTGTGTISVFGRQFRHDLSKGFPLLTTKKLHFKSIVNELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV +L+ +GV IW+EWA ++G+LGP+YG QW +WP  DG  I+QI  +V +L+
Sbjct: 61  WFLGGDTNVRWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              KMALPPCH L+QFYV + KLS  L+ RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENARQGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+P+N AS + LT MLA       GE + +L DVH+Y+NH EQ   Q++R PR L
Sbjct: 181 SDTFLGLPYNTASLACLTHMLAQQCDLDVGEIVISLSDVHIYSNHMEQVKTQIAREPRQL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +      +  +++EDF +  Y+PH  I A VS+
Sbjct: 241 PELKLLRKPASIYDYKFEDFEVVGYDPHPHIAAPVSI 277


>gi|301066434|ref|YP_003788457.1| thymidylate synthase [Lactobacillus casei str. Zhang]
 gi|300438841|gb|ADK18607.1| Thymidylate synthase [Lactobacillus casei str. Zhang]
          Length = 316

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 189/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSEGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 66  RGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q G+FIHT GD HLY NH +Q   QL+R+PR  P +++NP+  D+  F  +D  L +Y+
Sbjct: 246 LQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|313246913|emb|CBY35764.1| unnamed protein product [Oikopleura dioica]
          Length = 294

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 139/284 (48%), Positives = 185/284 (65%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
            QYLD+ R++I  G  + DRTG GTRS FG QMRF L+   FPLLTTKK   + +  ELL
Sbjct: 11  QQYLDICRNIIDNGHQKGDRTGTGTRSIFGGQMRFSLADNAFPLLTTKKTFLRGITEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WF+RG +N   L    V IWD      + D  G       +LGP+YG QWR +       
Sbjct: 71  WFIRGSTNAKELSDKKVRIWDANGSRAFLDSRGLHNREEWDLGPVYGFQWRHFGAKYGTM 130

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+  +++++R +P  RR ++ AWN   +D+MALPPCHCL QFYV NGKLS
Sbjct: 131 HDDYTGKGVDQLQKVIETIRNNPNDRRMLMVAWNPVDLDEMALPPCHCLCQFYVANGKLS 190

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+L+T+M+A V   + G+F+HTLGD H+YNNH +Q + Q+
Sbjct: 191 CQLYQRSCDMGLGVPFNIASYALMTIMIAHVTNLEPGDFVHTLGDAHVYNNHIDQLEEQI 250

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +R PR  P+M I   + D+ SF+ EDF L  YEP+ AI   ++V
Sbjct: 251 ARVPRKFPKMKITRKVEDIESFKMEDFELSEYEPYPAIKMPMAV 294


>gi|289550834|ref|YP_003471738.1| Thymidylate synthase [Staphylococcus lugdunensis HKU09-01]
 gi|289180366|gb|ADC87611.1| Thymidylate synthase [Staphylococcus lugdunensis HKU09-01]
          Length = 318

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL   ++  G ++ DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHDLCEDILAIGKNKDDRTQTGTVSKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL +H  +IW+EWA                                       
Sbjct: 69  KGDTNIRYLLQHNNNIWNEWAFEKYIKSSDYHGPDMTNFGHRSLVDDHFKAQYKEEMTRF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D  GN  DQ+ ++++ ++  P SRRHIVSAW
Sbjct: 129 KENILTDDAFARKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIEQIKTHPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N A +D MALPPCH +FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPAEVDTMALPPCHTMFQFYVQNGKLSCQLYQRSADIFLGVPFNIASYALLTHLVAKECD 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSRS    P + IN +   +    YED  L +Y+
Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAVHTQLSRSSFEPPTIRINTD-KSIFDISYEDIELINYQ 307

Query: 254 PHAAILAKVSV 264
            HAAI A ++V
Sbjct: 308 SHAAIKAPIAV 318


>gi|73662621|ref|YP_301402.1| thymidylate synthase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123734223|sp|Q49XN8|TYSY_STAS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|72495136|dbj|BAE18457.1| thymidylate synthase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 318

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 140/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G  + DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K +  ELLWF+
Sbjct: 9   YHQLCEEILEIGKQKNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIKYLLQYNNNIWNEWAFEKFVQSKDYNGPDMTDFGHRAQKDESFNLIYKDEMNQF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D  GN  DQ+ +++  ++ +P SRRHIVSAW
Sbjct: 129 KKRILNDDDFAKKYGDLGNVYGKQWRDWEDKYGNHYDQLKTVINQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASYSLLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH E  + QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIEAIETQLARESYNPPTLNINSD-ASIFDIDYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|256851235|ref|ZP_05556624.1| thymidylate synthase [Lactobacillus jensenii 27-2-CHN]
 gi|260660659|ref|ZP_05861574.1| thymidylate synthase [Lactobacillus jensenii 115-3-CHN]
 gi|282934702|ref|ZP_06339945.1| thymidylate synthase [Lactobacillus jensenii 208-1]
 gi|297206102|ref|ZP_06923497.1| thymidylate synthase [Lactobacillus jensenii JV-V16]
 gi|256616297|gb|EEU21485.1| thymidylate synthase [Lactobacillus jensenii 27-2-CHN]
 gi|260548381|gb|EEX24356.1| thymidylate synthase [Lactobacillus jensenii 115-3-CHN]
 gi|281301277|gb|EFA93578.1| thymidylate synthase [Lactobacillus jensenii 208-1]
 gi|297149228|gb|EFH29526.1| thymidylate synthase [Lactobacillus jensenii JV-V16]
          Length = 318

 Score =  287 bits (734), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 181/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+++++ G D+ DRTG GTRS FG QMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLDLLKNIMETGHDKTDRTGTGTRSRFGAQMRFDLSEGFPLLTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K                                     
Sbjct: 68  RGDTNIKFLLEHNNHIWDEWAFKKWVNSDDYHGPDMTDFGLRSQADSEFKKQYDEQMQIF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W    G  IDQI  ++  L   P SRR IVSAW
Sbjct: 128 TKRILEDADFAKKFGNLGDVYGAQWRHWKKRSGGSIDQIQEVLNQLTIHPDSRRMIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV + KLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDVPTSALPPCHTLFQFYVADNKLSLQLYQRSGDMFLGVPFNIASYSLLLSLVARQTG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF+Q + QLSR P   P++ +NP   D+  F  ED  +  Y+
Sbjct: 248 LEVGEFVHTLGDAHIYKNHFDQVEKQLSRDPFDSPKLWLNPAKKDISDFEMEDIKVVDYK 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGVIKAPVAV 318


>gi|223043144|ref|ZP_03613191.1| thymidylate synthase [Staphylococcus capitis SK14]
 gi|222443355|gb|EEE49453.1| thymidylate synthase [Staphylococcus capitis SK14]
          Length = 318

 Score =  287 bits (734), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 140/311 (45%), Positives = 185/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYVNSEDYQGPDMTNFGHRSQEDPEFNEQYKEEMKKF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KERILNDDEFARQYGDLGNVYGKQWRDWEDKDGNHFDQLKTVIEQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I+ MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPTEIETMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECE 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH    + QLSR     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHMSAIETQLSRESYKAPTLQINSD-KSIFDINYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|321468779|gb|EFX79762.1| hypothetical protein DAPPUDRAFT_304293 [Daphnia pulex]
          Length = 292

 Score =  287 bits (734), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 139/284 (48%), Positives = 188/284 (66%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL+L++++++ G+ + DRTG GTRS FG QMRF L  G FPLLTTK+V W+ ++ ELL
Sbjct: 9   HQYLNLIKNLLQNGNVKGDRTGTGTRSIFGAQMRFSLRSGRFPLLTTKRVFWRGLMEELL 68

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WF+RG +N + L    + IWD     E+ D       ++G+LGPIYG QWR +       
Sbjct: 69  WFVRGSTNANELREKDIHIWDGNSSREFLDSLGLKDREEGDLGPIYGFQWRHFGANYDNM 128

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    +DQ+ +++ ++R +P  RR I++AWN + +  MALPPCHCL QFYV NG+LS
Sbjct: 129 HSDYSCQGVDQLKNLINTIRTNPDDRRMILTAWNPSALPLMALPPCHCLAQFYVANGELS 188

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFNIASYSLLT M+A V G   GEFIHTLGD H+YNNH    + QL
Sbjct: 189 CQMYQRSADMGLGVPFNIASYSLLTCMIAHVTGLNPGEFIHTLGDAHVYNNHISALEKQL 248

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P + I   + D+  F+ +DF L  Y+PH  I   ++V
Sbjct: 249 ERQPRPFPTLKIIRKVSDIDDFKADDFVLEGYDPHPKIPMDMAV 292


>gi|15829009|ref|NP_326369.1| thymidylate synthase [Mycoplasma pulmonis UAB CTIP]
 gi|25091481|sp|Q98Q31|TYSY_MYCPU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|14089953|emb|CAC13711.1| THYMIDYLATE SYNTHASE (TS) (TSASE) [Mycoplasma pulmonis]
          Length = 286

 Score =  287 bits (734), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 142/294 (48%), Positives = 190/294 (64%), Gaps = 38/294 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L+ V++ G  + +RT V T S FGYQMRFDLSKGFPL+TTKK ++ ++ HELL
Sbjct: 1   MKQYLDFLKWVLEKGKHKENRTSVDTISAFGYQMRFDLSKGFPLVTTKKTNFSAIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL  + V+IW++W                             A K G LG
Sbjct: 61  WFIKGDTNIKYLVDNKVNIWNQWPYESYKKSQDFQSESLKEFIQKIKDDNEFAQKHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR   D+ G  IDQ+  +++ ++ +P SRR IVS+WN + ID M LPPCH LFQ
Sbjct: 121 PVYGKQWR---DFLG--IDQLKKVIEQIKNNPNSRRLIVSSWNPSEIDTMLLPPCHTLFQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV++ KLSC LYQRS D FLGIPFNIASY+LLT +LA     + G+F+H++GD H+Y N
Sbjct: 176 FYVNDNKLSCHLYQRSADAFLGIPFNIASYALLTFLLAQETNLEVGDFVHSIGDAHIYVN 235

Query: 212 HFEQADLQLSRSPRTLPQMII-NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ   QL R+P+ LP++II N NI ++    +ED  L  YE    I  +V+V
Sbjct: 236 HLEQVKTQLKRNPKELPKLIIKNKNIFEI---NFEDIELVDYEFDPIIKGEVAV 286


>gi|224046130|ref|XP_002194568.1| PREDICTED: thymidylate synthetase [Taeniopygia guttata]
          Length = 393

 Score =  286 bits (733), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 141/283 (49%), Positives = 182/283 (64%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL  +RH+++ G  R DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLW
Sbjct: 111 QQYLQQVRHILQHGHRREDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLW 170

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F++G +N   L   GV IWD     E+ DK       +G+LGP+YG QWR +        
Sbjct: 171 FIKGSTNAKELSAKGVKIWDANGSREFLDKQGFSTREEGDLGPVYGFQWRHFGAEYKDMH 230

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    +DQ+  ++++++ +P  RR I+ AWN   I  MALPPCH L QFYV NG+LSC
Sbjct: 231 TDYSNQGVDQLQKVIETIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSC 290

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E   +QL 
Sbjct: 291 QLYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQ 350

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P++ I   I D+ +F+ EDF +  Y PH  I  +++V
Sbjct: 351 REPRPFPKLKILREIKDISNFKAEDFQIEDYNPHPPIKMEMAV 393



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 13/91 (14%)

Query: 39  SKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADK------- 86
           S  FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD     E+ DK       
Sbjct: 33  SNQFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSAKGVKIWDANGSREFLDKHRFSTRE 92

Query: 87  DGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           DG+LGP+     R  P  +   + Q+  I+Q
Sbjct: 93  DGDLGPVXXXXXRPEPG-EQQYLQQVRHILQ 122


>gi|241896672|ref|ZP_04783968.1| thymidylate synthase [Weissella paramesenteroides ATCC 33313]
 gi|241870153|gb|EER73904.1| thymidylate synthase [Weissella paramesenteroides ATCC 33313]
          Length = 318

 Score =  286 bits (733), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + ++  G+ + DRTG GTRS FG Q+RFD+S+GFPLLTTK+V +  +  ELLWFL
Sbjct: 8   YLDLAQDILDNGAVKGDRTGTGTRSVFGRQLRFDMSEGFPLLTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIKFLLEHKNHIWDEWAFKNWIESAEYDGPDMTDFGRRSLVDDAFKAQYDEQHAIF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         GELG +YG QWR W    G  IDQI  ++  ++ +P SRR IV+AW
Sbjct: 128 VDRILNDDEFAQKYGELGDVYGAQWRHWRRVQGGFIDQIKDVIDQIKTNPNSRRLIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV +GKLS QLYQRS DVFLG+PFNIASYSLL  M+A+  G
Sbjct: 188 NPEDVPTQALPPCHTLFQFYVADGKLSLQLYQRSADVFLGVPFNIASYSLLLHMVAAQTG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + G+F+HT GD H+Y+NH EQ   QL R  R LP + +NP++ D+  +   D  + +Y 
Sbjct: 248 LEPGKFVHTFGDTHIYSNHIEQVTEQLQREMRELPTITLNPDVKDIAEYTMADIKINNYN 307

Query: 254 PHAAILAKVSV 264
           PHA+I A V+V
Sbjct: 308 PHASIKAPVAV 318


>gi|224476558|ref|YP_002634164.1| thymidylate synthase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222421165|emb|CAL27979.1| thymidylate synthase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 317

 Score =  286 bits (732), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 191/311 (61%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL + +++ G++R DRT  GT S FG+Q+RFDLS+GFPLLTTKKV +K +  EL+WF+
Sbjct: 8   YHDLCKEILEIGNERDDRTHTGTISKFGHQLRFDLSEGFPLLTTKKVSFKLLATELVWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 68  KGDTNIKYLLQYNNNIWNEWAFEKYIQSEDYTGPDMTNFGHRALQDLEFNERYQEEMDKF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G+LG +YG QWR W   DG   DQ++++++ ++  P SRRHIVSAW
Sbjct: 128 KKKILNDDAFAEKHGDLGNVYGKQWRDWVGADGKHYDQLATVIKQIKKHPTSRRHIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N + ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASYSLLT ++A   G
Sbjct: 188 NPSEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYSLLTHLVAKECG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +  + QLSR     PQ+ IN +   +   +YED  + +Y+
Sbjct: 248 LEVGEFVHTFGDAHIYSNHIDAIEKQLSRDSYAPPQLKINTD-KSIFEIQYEDLEIVNYQ 306

Query: 254 PHAAILAKVSV 264
            H  I A ++V
Sbjct: 307 SHPGIKAPIAV 317


>gi|195576199|ref|XP_002077964.1| GD22790 [Drosophila simulans]
 gi|194189973|gb|EDX03549.1| GD22790 [Drosophila simulans]
          Length = 321

 Score =  286 bits (732), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 143/283 (50%), Positives = 183/283 (64%), Gaps = 22/283 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLLRH+I  G  R DRT VGT S FG QMRFD+   FPLLTTK+V +++V  ELLWF+
Sbjct: 39  YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELLWFV 98

Query: 64  RGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------PD 103
            G ++   L    V IWD     E+ DK G       +LGP+YG QWR +         D
Sbjct: 99  AGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTCDDD 158

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLSC 161
           Y G  IDQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QFYV    G+LSC
Sbjct: 159 YSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGELSC 218

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    QL 
Sbjct: 219 QLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLE 278

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P++II   + D+  FR+EDF +  Y PH  I  +++V
Sbjct: 279 RTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPHPKIKMEMAV 321


>gi|58337204|ref|YP_193789.1| thymidylate synthase [Lactobacillus acidophilus NCFM]
 gi|227903787|ref|ZP_04021592.1| thymidylate synthase [Lactobacillus acidophilus ATCC 4796]
 gi|62901151|sp|Q5FKL6|TYSY_LACAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|58254521|gb|AAV42758.1| thymidylate synthase [Lactobacillus acidophilus NCFM]
 gi|227868674|gb|EEJ76095.1| thymidylate synthase [Lactobacillus acidophilus ATCC 4796]
          Length = 318

 Score =  286 bits (732), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL+  ++  G D+ DRTG GTRS FG QMRFDLSKGFP+LTTKKV +  +  ELLWFL
Sbjct: 8   YLDLINKIMIEGHDKNDRTGTGTRSYFGAQMRFDLSKGFPILTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHKNHIWDEWAFKNWVNSDEYTGPDMTDFGLRSQSDPEFNKIYQAELKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   DG+ IDQI ++++ ++ +P SRR IV+AW
Sbjct: 128 DRRILDDENFAKKYGNLGDVYGAQWRHWQKRDGSFIDQIENVIEQIKNNPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL  M+A   G
Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEFIHTLGD H+Y+NHF Q    LSR P   PQ+ +NP    +  F  +D  L  Y+
Sbjct: 248 LQVGEFIHTLGDAHIYSNHFSQVKEMLSRKPYESPQLWLNPEKKHIEDFDMQDIKLVDYK 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|325956588|ref|YP_004292000.1| thymidylate synthase [Lactobacillus acidophilus 30SC]
 gi|325333153|gb|ADZ07061.1| thymidylate synthase [Lactobacillus acidophilus 30SC]
          Length = 318

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   DG  IDQI ++++ ++  P SRR IV+AW
Sbjct: 128 DQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL  M+A   G
Sbjct: 188 NPEDVSTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF+Q    LSR P   PQ+ +NP    +  F+ +D  +  Y+
Sbjct: 248 LEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVDYK 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|325068281|ref|ZP_08126954.1| thymidylate synthase [Actinomyces oris K20]
          Length = 299

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 139/263 (52%), Positives = 178/263 (67%), Gaps = 2/263 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL  V+  G+ + DRTG GTRS F  Q+R+DL +GFP +TTK V  K+V  ELLWFL
Sbjct: 37  YENLLAEVLTNGTAKSDRTGTGTRSLFARQLRYDLQRGFPRITTKFVAMKAVKGELLWFL 96

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV +L   G++IWDEWAD  GELGP+YG QWRSWP  DG  IDQI+ ++ +LR DP
Sbjct: 97  RGETNVRWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGAIDQIAGLIDTLRTDP 156

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +  MAL PCH  FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 157 DSRRMLVSAWNVSELGSMALAPCHAFFQCYVADGRLSLQIYQRSADLFLGVPFNIASYAL 216

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SF 242
           LT MLA     + GE I T GD H+Y+NH EQ   QLSR P   P   +     + + ++
Sbjct: 217 LTHMLAQQTDLEPGELIWTGGDCHIYDNHIEQVRTQLSRVPSAHPFPTLRLERAESIDAY 276

Query: 243 RYEDF-TLRSYEPHAAILAKVSV 264
             +D    + YE H  I A V+V
Sbjct: 277 DMDDIDASQGYEHHPTIKAPVAV 299


>gi|315038135|ref|YP_004031703.1| thymidylate synthase [Lactobacillus amylovorus GRL 1112]
 gi|312276268|gb|ADQ58908.1| thymidylate synthase [Lactobacillus amylovorus GRL 1112]
          Length = 318

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFSLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   DG  IDQI ++++ ++  P SRR IV+AW
Sbjct: 128 DQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL  M+A   G
Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF+Q    LSR P   PQ+ +NP    +  F+ +D  +  Y+
Sbjct: 248 LEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVDYK 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|222151325|ref|YP_002560481.1| thymidylate synthase [Macrococcus caseolyticus JCSC5402]
 gi|222120450|dbj|BAH17785.1| thymidylate synthase [Macrococcus caseolyticus JCSC5402]
          Length = 316

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 144/312 (46%), Positives = 192/312 (61%), Gaps = 52/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +Y +LL+ +++ G D+ DRT  GT S FG+QMRFDLSKGFPLLTTKKV +K V  EL+WF
Sbjct: 7   EYHNLLKLILETGKDKDDRTNTGTLSVFGHQMRFDLSKGFPLLTTKKVSFKLVATELIWF 66

Query: 63  LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84
           +RGD+N+ YL  +  +IW+EWA                                      
Sbjct: 67  IRGDTNIRYLLEYNNNIWNEWAFLKWIESDEYMGPDMTDFGHRALRDPEFNEQYREQLNI 126

Query: 85  -------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                  D D     G+LG +YG QWR +   D  V DQ+  +++ ++++P+SRRHIVSA
Sbjct: 127 FKEKILTDDDFMQRFGDLGNVYGKQWRQFETKD-RVTDQLKEVIEQIKSNPHSRRHIVSA 185

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   I+ MALPPCH +FQFYV++ KLSCQLYQRS DVFLG+PFNIASYSLLT ++A   
Sbjct: 186 WNPGEIESMALPPCHTMFQFYVNDNKLSCQLYQRSADVFLGVPFNIASYSLLTHLVAREC 245

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEFIH++GD H+Y+NH E  + QL RS    P++ IN N  D+ +  YED  +  Y
Sbjct: 246 GLEVGEFIHSMGDAHIYSNHIEAVETQLMRSSYEAPKLQIN-NDKDIFNIEYEDLEIIDY 304

Query: 253 EPHAAILAKVSV 264
             H AI A ++V
Sbjct: 305 TAHPAIKAPIAV 316


>gi|331006117|ref|ZP_08329451.1| Thymidylate synthase [gamma proteobacterium IMCC1989]
 gi|330420096|gb|EGG94428.1| Thymidylate synthase [gamma proteobacterium IMCC1989]
          Length = 277

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 137/277 (49%), Positives = 179/277 (64%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  ++  G  + DRTG GT S FG Q R +L  GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKAYLDLLDDILSNGVQKGDRTGTGTLSVFGRQYRHNLQDGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N  +L  +GVSIWDEWAD++G+LGP+YG QW +WP  DG  I+QI  +V  L+
Sbjct: 61  WFLKGDTNTQWLKENGVSIWDEWADENGDLGPLYGKQWTAWPTKDGGSINQIDYVVDCLK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              +MALPPCH L+QFYV N +LS QLY RS
Sbjct: 121 NNPDSRRILFHGWNVEYLPDESVSPQENVKQGRMALPPCHLLYQFYVANNRLSAQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+P+N AS +LL  MLA       GE I + GD H+Y+NH EQ + QLSR PR L
Sbjct: 181 SDSFLGLPYNTASLALLVHMLAQQCDLDVGEVIVSTGDSHIYSNHLEQVNTQLSREPRAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PQ+ I      +  + ++DF +  Y+ H AI A V+V
Sbjct: 241 PQLTIKRKPASIYDYTFDDFEIIGYDAHPAIKAPVAV 277


>gi|195941079|ref|ZP_03086461.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4024]
          Length = 206

 Score =  285 bits (730), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 128/206 (62%), Positives = 164/206 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDV 206
           Y+LL  M+A     + G+F+ T GD 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDT 206


>gi|314936430|ref|ZP_07843777.1| thymidylate synthase [Staphylococcus hominis subsp. hominis C80]
 gi|313655049|gb|EFS18794.1| thymidylate synthase [Staphylococcus hominis subsp. hominis C80]
          Length = 318

 Score =  285 bits (730), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K +  ELLWF+
Sbjct: 9   YHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKVSFKLIATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIKYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQKDENFNKMYQQEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D  GN  DQ+ +++Q ++ +P SRRHIVSAW
Sbjct: 129 KEKVLNDDTFAKKYGDLGHVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH E    QLSR     P + IN     +    YED  L  Y+
Sbjct: 249 LEVGEFIHTFGDAHIYSNHIEAIKTQLSRESFAPPTLKINSE-QSIFDINYEDLELVDYQ 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|327183411|gb|AEA31858.1| thymidylate synthase [Lactobacillus amylovorus GRL 1118]
          Length = 318

 Score =  285 bits (729), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   DG  IDQI ++++ ++  P SRR IV+AW
Sbjct: 128 DQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL  M+A   G
Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF+Q    LSR P   PQ+ +NP    +  F+ +D  +  Y+
Sbjct: 248 LEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVDYK 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|269219953|ref|ZP_06163807.1| thymidylate synthase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210693|gb|EEZ77033.1| thymidylate synthase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 267

 Score =  285 bits (729), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 139/262 (53%), Positives = 179/262 (68%), Gaps = 2/262 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  V++ G+++ DRTG GT S FG Q+R+ L++GFP +TTK V  K+V  ELLWFL
Sbjct: 7   YEDLLADVLENGAEKGDRTGTGTLSVFGRQIRYRLAEGFPRITTKFVAMKAVKGELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            GD+NV +L   G++IWDEWAD  GELGP+YG QWRSWP  DG  IDQI  ++  LRA P
Sbjct: 67  SGDTNVRWLQERGITIWDEWADDAGELGPVYGYQWRSWPTPDGRHIDQIEQVLGELRAHP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWN A +DKMAL PCH +FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRLVVSAWNPADLDKMALQPCHAMFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   G+F+ T GD H+Y NH +Q   QL+R P   P + +      +  + 
Sbjct: 187 LTHMMAQQAGLDVGDFVWTGGDCHIYLNHVKQVKEQLTREPYPFPTLRLR-KAPSIFEYA 245

Query: 244 YEDFTL-RSYEPHAAILAKVSV 264
            +D    + Y  H  + A V+V
Sbjct: 246 MDDIDASQGYRHHPKLHAPVAV 267


>gi|303275197|ref|XP_003056897.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Micromonas pusilla CCMP1545]
 gi|226461249|gb|EEH58542.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Micromonas pusilla CCMP1545]
          Length = 524

 Score =  285 bits (729), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 135/282 (47%), Positives = 182/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL+R +I+ G+ + DRTG GT S FG  MRFDL + FPLLTTK+V W+ V  ELLWF
Sbjct: 243 QYLDLIRDIIESGNVKGDRTGTGTISKFGTSMRFDLRRSFPLLTTKRVFWRGVAEELLWF 302

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           + G +N   L    + IWD     E+ D  G       +LGP+YG QWR +         
Sbjct: 303 VGGRTNAKELQDKDIHIWDGNGSREYLDSVGLSHREEQDLGPVYGFQWRHFGAEYTDMHA 362

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +YDG  +DQ++ ++  ++ +P  RR +++AWN A + +MALPPCH   QFYV NG+LSCQ
Sbjct: 363 NYDGKGVDQLAEVIDKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSCQ 422

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H +GD H+Y+NH E    QL  
Sbjct: 423 MYQRSCDMGLGVPFNIASYSLLTCMIAQVCGLKPGDFVHVMGDTHVYSNHVEPLKKQLLC 482

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P + INP   D+ SF + DFT+  Y+PH  I  K++V
Sbjct: 483 EPRPFPTLKINPAKTDIDSFEFSDFTIEGYDPHPKIEMKMAV 524


>gi|312373107|gb|EFR20923.1| hypothetical protein AND_18288 [Anopheles darlingi]
          Length = 295

 Score =  285 bits (729), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 141/282 (50%), Positives = 181/282 (64%), Gaps = 21/282 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL L+R ++  G+ R DRTGVGT S FG Q+R+ L  G FPLLTTKKV ++ +  ELLWF
Sbjct: 14  YLQLIRDIVSKGNKRSDRTGVGTLSIFGTQLRYSLRDGTFPLLTTKKVFFRGIAEELLWF 73

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------P 102
           +RG +N   L   GV IWD     E+ D       ++G+LGP+YG QWR +         
Sbjct: 74  IRGSTNAKELQAKGVRIWDGNSTREFLDSCGFTDREEGDLGPVYGFQWRHFGATYGTCHD 133

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G   DQ++ I+  L+ +P  RR I+SAWN   I  MALPPCHCL QFYV NG+LSCQ
Sbjct: 134 DYTGKGKDQLAEIIDKLKNNPTDRRIILSAWNPVDIPIMALPPCHCLVQFYVANGELSCQ 193

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS DV LG+PFNIASYSLLT M+A V G + GEFIHT+GD H+Y NH +    QL R
Sbjct: 194 MYQRSADVGLGVPFNIASYSLLTHMIAHVTGLKAGEFIHTMGDTHIYLNHVDALKEQLQR 253

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P+  P + I   +  +  F+YEDF +  Y PH AI  +++V
Sbjct: 254 EPKPFPTLTIKRQVASIDDFQYEDFAINDYNPHPAIKMEMAV 295


>gi|313224867|emb|CBY20659.1| unnamed protein product [Oikopleura dioica]
          Length = 294

 Score =  285 bits (728), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 137/284 (48%), Positives = 185/284 (65%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
            QYLD+ R++I  G  + DRTG GTRS FG QMRF L+   FPLLTTKK   + +  ELL
Sbjct: 11  QQYLDICRNIIDNGHQKGDRTGTGTRSIFGGQMRFSLADNAFPLLTTKKTFLRGITEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WF+RG +N   L    V IWD      + D  G       +LGP+YG QWR +       
Sbjct: 71  WFIRGSTNAKELSDKKVRIWDANGSRAFLDSRGLHNREEWDLGPVYGFQWRHFGAKYGTM 130

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+  ++++++ +P  RR ++ AWN   +D+MALPPCHCL QFYV NGKLS
Sbjct: 131 HDDYTGKGVDQLQKVIETIKNNPNDRRMLMVAWNPVDLDEMALPPCHCLCQFYVANGKLS 190

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+L+T+M+A V   + G+F+HTLGD H+YNNH +Q + Q+
Sbjct: 191 CQLYQRSCDMGLGVPFNIASYALMTIMIAHVTNLEPGDFVHTLGDAHVYNNHIDQLEEQI 250

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +R PR  P+M I   + D+ +F+ EDF L  YEP+ AI   ++V
Sbjct: 251 ARVPRKFPKMKITRKVEDIENFKMEDFELSEYEPYPAIKMPMAV 294


>gi|199598695|ref|ZP_03212109.1| thymidylate synthase [Lactobacillus rhamnosus HN001]
 gi|258508392|ref|YP_003171143.1| thymidylate synthase [Lactobacillus rhamnosus GG]
 gi|199590383|gb|EDY98475.1| thymidylate synthase [Lactobacillus rhamnosus HN001]
 gi|257148319|emb|CAR87292.1| Thymidylate synthase [Lactobacillus rhamnosus GG]
 gi|259649706|dbj|BAI41868.1| thymidylate synthase [Lactobacillus rhamnosus GG]
          Length = 316

 Score =  285 bits (728), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHKNHIWDEWAFEKWVKSDEYRGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|17137556|ref|NP_477367.1| Ts [Drosophila melanogaster]
 gi|13959716|sp|O76511|TYSY_DROME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|7295876|gb|AAF51176.1| Ts [Drosophila melanogaster]
 gi|19528437|gb|AAL90333.1| RE18955p [Drosophila melanogaster]
 gi|220948118|gb|ACL86602.1| CG3181-PA [synthetic construct]
 gi|220957368|gb|ACL91227.1| Ts-PA [synthetic construct]
          Length = 321

 Score =  285 bits (728), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 145/286 (50%), Positives = 184/286 (64%), Gaps = 23/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MH YLDLLRH+I  G  R DRT VGT S FG QMRFD+   FPLLTTK+V +++V  ELL
Sbjct: 37  MH-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WF+ G ++   L    V IWD     E+ DK G       +LGP+YG QWR +       
Sbjct: 96  WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158
             DY G  IDQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QFYV    G+
Sbjct: 156 DDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGE 215

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    
Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R+PR  P++II   + D+  FR+EDF +  Y PH  I   ++V
Sbjct: 276 QLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321


>gi|70726480|ref|YP_253394.1| thymidylate synthase [Staphylococcus haemolyticus JCSC1435]
 gi|123776140|sp|Q4L6D7|TYSY_STAHJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|68447204|dbj|BAE04788.1| thymidylate synthase [Staphylococcus haemolyticus JCSC1435]
          Length = 318

 Score =  285 bits (728), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 140/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K +  ELLWF+
Sbjct: 9   YHALCEEILEIGNQRDDRTHTGTFSKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFEKYVQSNDYHGPDMTNFGHRALQDDEFNELYKEEMSKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D +GN  DQ+ ++++ ++  P SRRHIVSAW
Sbjct: 129 KQHILNDDSFAKKYGDLGNVYGKQWRDWVDKEGNHFDQLKTVIEQIKNSPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH E    QLSR+    P + IN N   +    YED  L  Y 
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIEAIKTQLSRNSFDPPTLKINSN-ASIFDINYEDLELIGYN 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|26554141|ref|NP_758075.1| thymidylate synthase [Mycoplasma penetrans HF-2]
 gi|38258786|sp|Q8EV81|TYSY_MYCPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|26454149|dbj|BAC44479.1| thymidylate synthase [Mycoplasma penetrans HF-2]
          Length = 289

 Score =  285 bits (728), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 136/294 (46%), Positives = 189/294 (64%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +Y DLL+ V+  G  + +RT     + FG Q R+DL+KGFPLLTTKK+ +K++ HELL
Sbjct: 1   MKEYKDLLKLVLDNGIMQENRTDTDAIAYFGTQSRYDLTKGFPLLTTKKMAYKAIFHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WFL+G++N+ YL  + V IW+EW                             A + GELG
Sbjct: 61  WFLKGETNIKYLVDNNVKIWNEWPYENYKKSPYFKNESIDEFILKIKEDDSFAKQFGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++     N +DQI+++++ ++ + YSRR IVS WN + I  M LPPCHCLFQ
Sbjct: 121 PVYGRQWRNF-----NGVDQITNLIEEIKKNKYSRRLIVSVWNPSEIKNMLLPPCHCLFQ 175

Query: 152 FYVDN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           F+V++  +LSCQLYQRS D+FLG+PFNIASYSLLT M+A V      EF+HT+G  H+YN
Sbjct: 176 FFVNSKNELSCQLYQRSADLFLGVPFNIASYSLLTYMIAQVTNTTAKEFVHTIGVAHIYN 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH +Q   QL+R P  LP +++N NI ++  F+ ED  ++ Y  H AI  KV+V
Sbjct: 236 NHIDQVKEQLTREPLQLPTLVLNKNIKNIFDFKIEDIEIKDYNSHPAIKGKVAV 289


>gi|238854701|ref|ZP_04645031.1| thymidylate synthase [Lactobacillus jensenii 269-3]
 gi|260663934|ref|ZP_05864787.1| thymidylate synthase [Lactobacillus jensenii SJ-7A-US]
 gi|282932908|ref|ZP_06338305.1| thymidylate synthase [Lactobacillus jensenii 208-1]
 gi|313472235|ref|ZP_07812727.1| thymidylate synthase [Lactobacillus jensenii 1153]
 gi|238832491|gb|EEQ24798.1| thymidylate synthase [Lactobacillus jensenii 269-3]
 gi|239529621|gb|EEQ68622.1| thymidylate synthase [Lactobacillus jensenii 1153]
 gi|260561820|gb|EEX27789.1| thymidylate synthase [Lactobacillus jensenii SJ-7A-US]
 gi|281302943|gb|EFA95148.1| thymidylate synthase [Lactobacillus jensenii 208-1]
          Length = 318

 Score =  285 bits (728), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+++++ G D+ DRTG GTRS FG QMRFDLS+GFPL+TTKKV +  +  ELLWFL
Sbjct: 8   YLDLLKNIMETGHDKTDRTGTGTRSKFGAQMRFDLSQGFPLVTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L  H   IWDEWA                                       
Sbjct: 68  RGDTNIKFLLEHKNHIWDEWAFKNWVNSPEYQGPDMNDFGLRSQKDADFKKLYDEQMKLF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G LG +YG QWR W    G  IDQI  ++  L+  P SRR IVSAW
Sbjct: 128 TERILSDEAFAEKYGNLGDVYGAQWRHWKKRSGGSIDQIQDVLNQLQTHPDSRRMIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV + KLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDVPTSALPPCHTLFQFYVADNKLSLQLYQRSGDMFLGVPFNIASYSLLLSLVARQTG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
           F+ GEF+HTLGD H+Y NHF+Q + QL+R P   P++ +N    ++  F  ED  +  Y+
Sbjct: 248 FEVGEFVHTLGDAHIYKNHFDQVEKQLARDPFDSPKLWLNSAKKNISDFEMEDIKVLDYK 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGVIKAPVAV 318


>gi|227498216|ref|ZP_03928387.1| thymidylate synthase [Actinomyces urogenitalis DSM 15434]
 gi|226832398|gb|EEH64781.1| thymidylate synthase [Actinomyces urogenitalis DSM 15434]
          Length = 295

 Score =  285 bits (728), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 140/264 (53%), Positives = 183/264 (69%), Gaps = 4/264 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL  V+  G+ + DRTG GTRS F  Q+R+DLS+GFP +TTK V  K+V  ELLWFL
Sbjct: 33  YEELLAEVLLDGAPKGDRTGTGTRSLFARQLRYDLSQGFPRVTTKFVAMKAVKGELLWFL 92

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G SN+++LH  G++IWDEWAD+ GELGP+YGVQWRSWP   G  IDQI+ ++ +LR DP
Sbjct: 93  QGASNIAWLHEQGITIWDEWADEHGELGPVYGVQWRSWPSRRGEAIDQITQLIHTLRHDP 152

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +  MAL PCH  FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 153 DSRRMLVSAWNVSELGAMALAPCHAFFQCYVADGRLSLQVYQRSADLFLGVPFNIASYAL 212

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR--TLPQMIINPNIVDLLS 241
           LT MLA   G + GE + T GD H+Y+NH  Q   QLSR P+    P + +  +   + S
Sbjct: 213 LTHMLAQQAGLEPGELVWTGGDCHIYDNHLAQVREQLSRVPQAYAFPTLRLR-HAESIDS 271

Query: 242 FRYEDFTLRS-YEPHAAILAKVSV 264
           +  ED    + Y+ H  I A V+V
Sbjct: 272 YTMEDIDASAGYQHHPVIKAPVAV 295


>gi|149601|gb|AAA25255.1| thymidylate synthase [Lactobacillus casei]
          Length = 329

 Score =  285 bits (728), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 19  YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 78

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 79  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 138

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 139 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 198

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 199 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 258

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 259 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 318

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 319 PYPAIKAPVAV 329


>gi|229552189|ref|ZP_04440914.1| thymidylate synthase [Lactobacillus rhamnosus LMS2-1]
 gi|229314491|gb|EEN80464.1| thymidylate synthase [Lactobacillus rhamnosus LMS2-1]
          Length = 325

 Score =  285 bits (728), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 15  YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 74

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 75  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 134

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 135 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 194

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 195 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 254

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 255 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 314

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 315 PYPAIKAPVAV 325


>gi|167957301|ref|ZP_02544375.1| Thymidylate synthase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 312

 Score =  285 bits (728), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 147/312 (47%), Positives = 190/312 (60%), Gaps = 48/312 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD+LR+V   G  + +RTG GT   FG Q R++L  GFP +TTKK+++ SV HELL
Sbjct: 1   MRQYLDILRYVRNNGIQKSNRTGTGTTEIFGAQTRYNLEDGFPAVTTKKLYFNSVAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------------------------------- 83
           WFL+G  N+ YL ++GV IWDEW                                     
Sbjct: 61  WFLKGTGNIEYLAQNGVHIWDEWPYKNYLEKTGQRIPEINGDEWCAGMKQFIGRIATDHA 120

Query: 84  -ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
            A++ G+LGP+YGVQWR WPD  G  IDQI + +  ++ +P SRR+IVSAWNVA ID +A
Sbjct: 121 FAEEWGDLGPVYGVQWRKWPDGKGGTIDQIQNAIDMIKNNPMSRRNIVSAWNVAEIDDIA 180

Query: 143 ----LPPCHCLFQFYV---DNG---KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
               LPPCH +FQF V   +NG   KL   L QRS D+FLG+PFNIASY+LL  M+A V 
Sbjct: 181 RAGGLPPCHTIFQFNVRPGENGEKDKLDLTLTQRSADIFLGVPFNIASYALLLSMIAQVT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G Q GEF+HTL   H+YNNH  Q D QLSR P  LP++ +NP+I ++  F  +D  L  Y
Sbjct: 241 GKQPGEFVHTLNSAHIYNNHRVQVDEQLSRHPLPLPKLWLNPDIKNIDDFTIKDIRLEGY 300

Query: 253 EPHAAILAKVSV 264
           E H+ I A ++V
Sbjct: 301 ESHSPIKAPIAV 312


>gi|136612|sp|P00469|TYSY_LACCA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157831773|pdb|1LCA|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And Cb3717
 gi|157831774|pdb|1LCB|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dtmp And H2folate
 gi|157831775|pdb|1LCE|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And Ch2thf
 gi|157832141|pdb|1NJE|A Chain A, Thymidylate Synthase With 2'-Deoxycytidine
           5'-Monophosphate (Dcmp)
 gi|157833951|pdb|1THY|A Chain A, Refined Structures Of Substrate-Bound And Phosphate-Bound
           Thymidylate Synthase From Lactobacillus Casei
 gi|157834017|pdb|1TSL|A Chain A, L. Casei Thymidylate Synthase With Species Specific
           Inhibitor
 gi|157834018|pdb|1TSM|A Chain A, L. Casei Thymidylate Synthase With Species Specific
           Inhibitor
 gi|157836379|pdb|2TDM|A Chain A, Structure Of Thymidylate Synthase
 gi|157837001|pdb|4TMS|A Chain A, Plastic Adaptation Toward Mutations In Proteins:
           Structural Comparison Of Thymidylate Synthases
 gi|218681751|pdb|3BNZ|A Chain A, Crystal Structure Of Thymidylate Synthase Ternary Complex
           With Dump And 8a Inhibitor
 gi|221046605|pdb|3BYX|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And The Phtalimidic Derivative C00 In Multiple
           Binding Modes
 gi|221046606|pdb|3BZ0|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And The Phtalimidic Derivative C00
 gi|221046647|pdb|3C06|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And The Phtalimidic Derivative 14c In Multiple
           Binding Modes-Mode 1
 gi|221046648|pdb|3C0A|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And The Phtalimidic Derivative 14c In Multiple
           Binding Modes-Mode 2
 gi|302566074|pdb|3IJZ|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And Pthalimidic Derivative 15c
 gi|302566075|pdb|3IK0|A Chain A, Lactobacillus Casei Thymidylate Synthase In Ternary
           Complex With Dump And The Phtalimidic Derivative 7c1
 gi|302566076|pdb|3IK1|A Chain A, Lactobacillus Casei Thymidylate Synthase In Ternary
           Complex With Dump And The Phtalimidic Derivative 20c
 gi|208731|gb|AAA72795.1| thymidylate synthase (EC 2.1.1.45) [synthetic construct]
          Length = 316

 Score =  284 bits (727), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|313123489|ref|YP_004033748.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280052|gb|ADQ60771.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|325684319|gb|EGD26489.1| thymidylate synthase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 318

 Score =  284 bits (727), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V +  +  ELLWFL
Sbjct: 8   YLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   DG  IDQI+ +++ ++ +P SRR IV+AW
Sbjct: 128 CQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT+GD H+Y NHF Q + QL R+P   P + +NP    +  F   D  L +Y+
Sbjct: 248 LEVGEFVHTIGDAHIYKNHFAQVEEQLKRTPFDAPTLWLNPEKKKVADFEMADIKLVNYQ 307

Query: 254 PHAAILAKVSV 264
             + I A V+V
Sbjct: 308 HGSTIKAPVAV 318


>gi|330723643|gb|AEC46013.1| thymidylate synthase [Mycoplasma hyorhinis MCLD]
          Length = 270

 Score =  284 bits (727), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 134/272 (49%), Positives = 179/272 (65%), Gaps = 34/272 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+ LRH+++ G  + +RT V + +TFGYQMRFDLS+GFPL+TTKK ++ S+ HELL
Sbjct: 1   MRQYLEFLRHILQKGIKKTNRTIVDSINTFGYQMRFDLSEGFPLVTTKKTNFASIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL  + V+IW+EW                             A + GELG
Sbjct: 61  WFIKGDTNIKYLVDNNVNIWNEWPYENYKKSKEFQGESLKEFIVKIKENPSFAKQFGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++       +DQ+  ++Q ++ +P SRR IVSAWN   ID M LPPCH LFQ
Sbjct: 121 PVYGKQWRNFLG-----VDQLKKVIQEIKTNPNSRRLIVSAWNPLEIDSMLLPPCHSLFQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV N KLSCQLYQRS D FLG+PFNIASYSLL  M+A     + GEFIHT+GD H+Y N
Sbjct: 176 FYVANNKLSCQLYQRSADAFLGVPFNIASYSLLVFMIAQECELEVGEFIHTIGDAHIYVN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           H +Q +LQL+R P  LP++ I  N+  + + +
Sbjct: 236 HIDQVNLQLTRIPHKLPKLKITKNLFLIFNLK 267


>gi|9628075|ref|NP_042669.1| thymidylate synthase [Equid herpesvirus 2]
 gi|6686067|sp|Q89940|TYSY_EHV2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|695245|gb|AAC13860.1| thymidylate synthase [Equid herpesvirus 2]
          Length = 289

 Score =  284 bits (726), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 141/283 (49%), Positives = 184/283 (65%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL+ +R ++  G  R DRTGVGT S FG Q ++ L   FPLLTTK+V W+ V+ ELLW
Sbjct: 7   HQYLNTVREILANGVRRGDRTGVGTLSVFGDQAKYSLRGQFPLLTTKRVFWRGVLEELLW 66

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101
           F+RG ++ + L   GV IWD    +D            G+LGP+YG QWR        S 
Sbjct: 67  FIRGSTDSNELSARGVKIWDANGSRDFLARAGLGHREPGDLGPVYGFQWRHFGAAYVDSK 126

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++  ++ +P SRR +++AWN A +  MALPPCH L QFYV  G+LSC
Sbjct: 127 TDYRGQGVDQLRDLIGEIKRNPESRRLVLTAWNPADLPAMALPPCHLLCQFYVAGGELSC 186

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFNIASYSLLT M+A + G + G+FIH LGD H+Y NH E   LQL+
Sbjct: 187 QLYQRSGDMGLGVPFNIASYSLLTYMVAHLTGLEPGDFIHVLGDAHVYLNHVEPLKLQLT 246

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           RSPR  P++ I   + D+  FR EDF L  Y PHAAI  +++V
Sbjct: 247 RSPRPFPRLRILRRVEDIDDFRAEDFALEGYHPHAAIPMEMAV 289


>gi|326774199|ref|ZP_08233481.1| thymidylate synthase [Actinomyces viscosus C505]
 gi|326636338|gb|EGE37242.1| thymidylate synthase [Actinomyces viscosus C505]
          Length = 275

 Score =  284 bits (726), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 139/263 (52%), Positives = 177/263 (67%), Gaps = 2/263 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL  V+  G+ + DRTG GTRS F  Q+R+DL +GFP +TTK V  K+V  ELLWFL
Sbjct: 13  YENLLAEVLTNGTAKSDRTGTGTRSLFARQLRYDLRRGFPRITTKFVAMKAVKGELLWFL 72

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV +L   G++IWDEWAD  GELGP+YG QWRSWP  DG  IDQI+ ++ +LR DP
Sbjct: 73  RGETNVRWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGAIDQITGLIDTLRTDP 132

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +  MAL PCH  FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 133 DSRRMLVSAWNVSELGSMALAPCHAFFQCYVADGRLSLQIYQRSADLFLGVPFNIASYAL 192

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SF 242
           L  MLA     + GE I T GD H+Y+NH EQ   QLSR P   P   +     + + S+
Sbjct: 193 LAHMLAQQTDLEPGELIWTGGDCHIYDNHIEQVRTQLSRVPNAHPFPTLRLERAESIDSY 252

Query: 243 RYEDF-TLRSYEPHAAILAKVSV 264
             +D    + YE H  I A V+V
Sbjct: 253 DMDDIDASQGYEHHPTIKAPVAV 275


>gi|118086858|ref|XP_419147.2| PREDICTED: similar to Chain A, Human Thymidylate Synthase Complexed
           With Dump And Raltitrexed, An Antifolate Drug, Is In The
           Closed Conformation [Gallus gallus]
          Length = 298

 Score =  284 bits (726), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 140/282 (49%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  +RH+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 17  QYLQQVRHILQHGHRKEDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 76

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD     E+ DK       +G+LGP+YG QWR +         
Sbjct: 77  IKGSTNAKELSAKGVKIWDANGSREFLDKQGFCTREEGDLGPVYGFQWRHFGADYKDMHT 136

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY    +DQ+  +++ ++ +P  RR I+ AWN   I  MALPPCH L QFYV NG+LSCQ
Sbjct: 137 DYSNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQ 196

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E   +QL R
Sbjct: 197 LYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQR 256

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR LP++ I   + D+  F+ EDF +  Y PH  I  +++V
Sbjct: 257 EPRPLPKLRILRKVEDISDFKAEDFQIEDYNPHPPIKMEMAV 298


>gi|323466728|gb|ADX70415.1| Thymidylate synthase [Lactobacillus helveticus H10]
          Length = 318

 Score =  284 bits (726), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTG GTRS FG QMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLDLLQKIMSEGHDKDDRTGTGTRSYFGAQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVNSSEYQGPDMTDFGLRSQSDPEFNKIYQAEMKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   +G  IDQI+ +++ ++  P SRR IV+AW
Sbjct: 128 DQRILDDEDFAKKYGNLGDVYGAQWRHWEKREGGFIDQIADVIKQIKETPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNLIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEFIHTLGD H+Y NH +Q +  LSR P   PQ+ +NP   ++  F  +D  +  Y+
Sbjct: 248 LQVGEFIHTLGDAHIYRNHLKQVEELLSRKPYDSPQLWLNPEKKNIADFEMKDIKVVDYQ 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|300812535|ref|ZP_07092956.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496492|gb|EFK31593.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 318

 Score =  283 bits (725), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V +  +  ELLWFL
Sbjct: 8   YLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   DG  IDQI+ +++ ++ +P SRR IV+AW
Sbjct: 128 CQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT+GD H+Y NHF Q + QL R P   P + +NP    +  F   D  L +Y+
Sbjct: 248 LEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPEKKKVADFEMADIKLVNYQ 307

Query: 254 PHAAILAKVSV 264
             + I A V+V
Sbjct: 308 HGSTIKAPVAV 318


>gi|3342458|gb|AAC27622.1| thymidylate synthase [Drosophila melanogaster]
          Length = 321

 Score =  283 bits (725), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 144/286 (50%), Positives = 184/286 (64%), Gaps = 23/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MH YLDLLRH+I  G  R DRT VGT S FG QMRFD+   FPLLTTK+V +++V  ELL
Sbjct: 37  MH-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WF+ G ++   L    V IWD     E+ DK G       +LGP+YG QWR +       
Sbjct: 96  WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158
             DY G  IDQ+  ++ ++R +P  RR I+SAWN   + KMALPPCHCL QFYV    G+
Sbjct: 156 DDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDMPKMALPPCHCLAQFYVSEKRGE 215

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    
Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R+PR  P++II   + D+  FR+EDF +  Y PH  I   ++V
Sbjct: 276 QLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321


>gi|304390727|ref|ZP_07372679.1| thymidylate synthase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304325610|gb|EFL92856.1| thymidylate synthase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 272

 Score =  283 bits (725), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 135/263 (51%), Positives = 183/263 (69%), Gaps = 2/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DLL  ++  G ++ DRTG GTRS FG Q+R+DLS+GFP +TTK ++W  VV ELLW
Sbjct: 12  HQYEDLLADIMSHGVEKSDRTGTGTRSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G +N  +L  + + IWDEWAD+ G+LGPIYG QWR+WP   G V DQ+  ++++L+ 
Sbjct: 72  FLQGGTNNRWLQENNIHIWDEWADESGDLGPIYGHQWRAWPTAAGPV-DQVKKLLETLQN 130

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV+ +D+MAL PCH  FQ +V  G+LS Q+YQRS D+FLG+PFNIASY
Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA     Q GE + T GD H+Y+NH +Q  LQLSR P   P + ++     +  
Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFPILELD-KAESIDG 249

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + ++   L +Y+ H  I A V+V
Sbjct: 250 YTFDMIRLANYQHHPKISAPVAV 272


>gi|240129500|gb|ACS44779.1| thymidylate synthase [Litopenaeus vannamei]
          Length = 289

 Score =  283 bits (725), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 135/284 (47%), Positives = 184/284 (64%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLDL+R +++ G+ + DRTG GT S FG QMR+ L  G FPLLTTK+V W+ V  ELL
Sbjct: 6   YQYLDLIRQIMRTGNRKGDRTGTGTISMFGAQMRYSLRDGIFPLLTTKRVFWRGVAEELL 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW------- 101
           WF+RG +N   L    + IWD  + K+            G+LGP+YG QWR +       
Sbjct: 66  WFVRGSTNAKELQEKDIHIWDGNSSKEFLNKMGFHDREEGDLGPVYGFQWRHFGAPYADM 125

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+  ++ +++ +P  RR I+ AWN   + KMALPPCHCL QFYV NG+LS
Sbjct: 126 HTDYTGQGVDQLQQVIDTIKNNPDDRRIIMCAWNPVDVPKMALPPCHCLCQFYVANGELS 185

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V   + G+F+HTLGD H+Y+NH E  + QL
Sbjct: 186 CQLYQRSADMGLGVPFNIASYALLTYMIAHVTDLKPGDFVHTLGDAHVYSNHCEALEEQL 245

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P + I   + ++  F++EDF L  Y+PH  I  +++V
Sbjct: 246 KREPRPFPSLKIKRKVENISDFKFEDFELDGYKPHPKIKMEMAV 289


>gi|242373739|ref|ZP_04819313.1| thymidylate synthase [Staphylococcus epidermidis M23864:W1]
 gi|242348559|gb|EES40161.1| thymidylate synthase [Staphylococcus epidermidis M23864:W1]
          Length = 318

 Score =  283 bits (725), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 184/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K +  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIQSNDYQGPDMTDFGHRSQQDPEFNELYKEEMKKF 128

Query: 85  ------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                 D D     G+LG +YG QWR W D DG   DQ+ +++  ++ +P SRRHIVSAW
Sbjct: 129 KQRILNDDDFARQYGDLGNVYGKQWRDWEDKDGRHFDQLKTVIDQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECH 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +  + QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAIETQLARESYQAPTLKINTD-KSIFDINYEDLEVVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|300361883|ref|ZP_07058060.1| thymidylate synthase [Lactobacillus gasseri JV-V03]
 gi|300354502|gb|EFJ70373.1| thymidylate synthase [Lactobacillus gasseri JV-V03]
          Length = 327

 Score =  283 bits (725), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRF+LS GFP+LTTK+V +  +  ELLWFL
Sbjct: 17  YLDLLNKIMTEGHDKEDRTGTGTRSLFGAQMRFNLSDGFPILTTKRVPFGLIKSELLWFL 76

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 77  RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDTKFKKVYQEEMKRF 136

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVSAW
Sbjct: 137 GERILADQDFAAKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 196

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 197 NPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQETG 256

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y NHF+Q    L+R P   P++ +NP+   +  F   D  L +Y+
Sbjct: 257 LKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVNYK 316

Query: 254 PHAAILAKVSV 264
            H+ I A V+V
Sbjct: 317 HHSTIKAPVAV 327


>gi|104773868|ref|YP_618848.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116513875|ref|YP_812781.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122275355|sp|Q04B29|TYSY_LACDB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123077296|sp|Q1GAP2|TYSY_LACDA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|103422949|emb|CAI97614.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116093190|gb|ABJ58343.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|325125534|gb|ADY84864.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 318

 Score =  283 bits (725), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V +  +  ELLWFL
Sbjct: 8   YLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   DG  IDQI+ +++ ++ +P SRR IV+AW
Sbjct: 128 CQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT+GD H+Y NHF Q + QL R P   P + +NP    +  F   D  L +Y+
Sbjct: 248 LEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPGKKKVADFEMADIKLVNYQ 307

Query: 254 PHAAILAKVSV 264
             + I A V+V
Sbjct: 308 HGSTIKAPVAV 318


>gi|195342137|ref|XP_002037658.1| GM18183 [Drosophila sechellia]
 gi|194132508|gb|EDW54076.1| GM18183 [Drosophila sechellia]
          Length = 321

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 142/283 (50%), Positives = 182/283 (64%), Gaps = 22/283 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLLRH+I  G  R DRT VGT S FG QMRFD+   FPLLTTK+V +++V  ELLWF+
Sbjct: 39  YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELLWFV 98

Query: 64  RGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------PD 103
            G ++   L    V IWD     E+ DK G       +LGP+YG QWR +         +
Sbjct: 99  AGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRVVGDLGPVYGFQWRHFGAQYGTCDDN 158

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLSC 161
           Y G  IDQ+  ++ ++R  P  RR I+SAWN   I KMALPPCHCL QFYV    G+LSC
Sbjct: 159 YSGKGIDQLRQVIDTIRNKPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGELSC 218

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    QL 
Sbjct: 219 QLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLQ 278

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P++II   + D+  FR+EDF +  Y PH  I  +++V
Sbjct: 279 RTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPHPKIKMEMAV 321


>gi|162464289|ref|NP_001104916.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea
           mays]
 gi|6685381|sp|O81395|DRTS_MAIZE RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|3309066|gb|AAC26003.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea
           mays]
          Length = 521

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 135/283 (47%), Positives = 180/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L+  +I+ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW
Sbjct: 239 YQYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRKNFPLLTTKRVFWRGVVEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+ G +N   L   G+ IWD  A ++            G+LGPIYG QWR +        
Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASREYLNSVGLAHREEGDLGPIYGFQWRHFGAEYTDMH 358

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ DP  RR I+SAWN + + KMALPPCH   QFYV+NG+LSC
Sbjct: 359 ADYTGKGFDQLMDVIDKIKNDPEDRRIILSAWNPSDLKKMALPPCHMFAQFYVENGELSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     G+F+H +GD H+Y NH    + Q+ 
Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRNHVRALEEQIQ 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP+  D+ SF   DF L  Y+PH  I  K++V
Sbjct: 479 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKIEMKMAV 521


>gi|157834024|pdb|1TSY|A Chain A, Thymidylate Synthase R179k Mutant
 gi|157834025|pdb|1TSZ|A Chain A, Thymidylate Synthase R179k Mutant
          Length = 316

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR+ IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRKLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|228476137|ref|ZP_04060845.1| thymidylate synthase [Staphylococcus hominis SK119]
 gi|228269960|gb|EEK11440.1| thymidylate synthase [Staphylococcus hominis SK119]
          Length = 318

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K +  ELLWF+
Sbjct: 9   YHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKVSFKLIATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIKYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQKDENFNKMYQQEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D  GN  DQ+ +++Q ++ +P SRRHIVSAW
Sbjct: 129 KEKVLNDDTFAKKYGDLGHVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH E    QLSR     P + I+     +    YED  L  Y+
Sbjct: 249 LEVGEFIHTFGDAHIYSNHIEAIKTQLSRESFAPPTLKISSE-QSIFDINYEDLELVDYQ 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|157834186|pdb|1VZB|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Binary Complex
           With Dump
 gi|157834187|pdb|1VZC|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Binary Complex
           With Fdump
 gi|157834188|pdb|1VZD|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Ternary Complex
           With Fdump And Cb3717
 gi|157834189|pdb|1VZE|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Ternary Complex
           With Dump And Cb3717
          Length = 316

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  +LLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSQLLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKAPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|225619118|ref|YP_002720344.1| thymidylate synthase [Brachyspira hyodysenteriae WA1]
 gi|254790229|sp|C0QWM9|TYSY_BRAHW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|225213937|gb|ACN82671.1| thymidylate synthase [Brachyspira hyodysenteriae WA1]
          Length = 266

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 138/266 (51%), Positives = 180/266 (67%), Gaps = 2/266 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
           M  YLDLL+ V++ G + +DRTGVGTR  FG Q+RF       P++TTK+V  K V+ EL
Sbjct: 1   MQNYLDLLKKVLEEGEETKDRTGVGTRRIFGPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           LWFL+G +N+ +L  + V IWDEWAD  GELGP+YG QWR+W   +GN IDQIS+IV +L
Sbjct: 61  LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNIVNTL 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNI 178
           R +P SRR I++AWNV  ID+M LPPCH + QF V++ G +   LYQRS D+FLG+PFNI
Sbjct: 121 RNNPASRRIILNAWNVGEIDQMHLPPCHMMCQFSVNSKGGIITHLYQRSADLFLGVPFNI 180

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           +SY++LT +LA   G    E I T GD H+YNNH EQ  LQLSR P      +   N  +
Sbjct: 181 SSYAILTRLLAMHSGLHASELIMTFGDAHIYNNHIEQVKLQLSREPLEQTTELFIDNRPN 240

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           + S  YEDF L  Y+ +  I A+V+V
Sbjct: 241 IFSHVYEDFKLEGYKYYPTIKAEVAV 266


>gi|332638740|ref|ZP_08417603.1| thymidylate synthase [Weissella cibaria KACC 11862]
          Length = 318

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/311 (45%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V++ G  + DRTG GTRS FG QMRFD+++GFPLLTTK+V +  +  ELLWFL
Sbjct: 8   YLDLAQEVLETGHAKGDRTGTGTRSLFGRQMRFDMAEGFPLLTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +G++N+ +L  H   IWDEWA K+                                    
Sbjct: 68  QGNTNIRFLLEHNNHIWDEWAFKNWIESADYTGPDMTDFGRRSLVDEAFKAQYDEQHQLF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         GELG +YG QWR W    G  IDQI  +V  ++ +P SRR IV+AW
Sbjct: 128 VDRILADDAFAKQYGELGDVYGAQWRHWRKVQGGFIDQIDDVVNQIKTNPNSRRLIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV +GKLS QLYQRS D+FLG+PFNIASYSLL  M+A+  G
Sbjct: 188 NPEDVPSQALPPCHTLFQFYVADGKLSLQLYQRSADIFLGVPFNIASYSLLLHMVAAQTG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y+NH  Q   QLSR    LPQ+++NP++  +  +  +D  +  Y+
Sbjct: 248 LEAGEFVHTLGDAHIYSNHIAQVTEQLSREMVELPQLVLNPDVKSIFDYTMDDIKVEGYK 307

Query: 254 PHAAILAKVSV 264
           P  +I A V+V
Sbjct: 308 PAKSIKAPVAV 318


>gi|312872324|ref|ZP_07732394.1| thymidylate synthase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092147|gb|EFQ50521.1| thymidylate synthase [Lactobacillus iners LEAF 2062A-h1]
          Length = 318

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V +  +  ELLWFL
Sbjct: 8   YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQNDELFNIKYQEQMKIF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W    G+ IDQ+ +I++ ++ +P SRR IVSAW
Sbjct: 128 TEKILSDVTFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNIIEQIKTNPDSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHFEQ + QLSR+    P + +NP    +L F  +D  L  Y 
Sbjct: 248 LELGEFVHTLGDAHIYKNHFEQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLIDYN 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|312871389|ref|ZP_07731484.1| thymidylate synthase [Lactobacillus iners LEAF 3008A-a]
 gi|311093042|gb|EFQ51391.1| thymidylate synthase [Lactobacillus iners LEAF 3008A-a]
          Length = 318

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V +  +  ELLWFL
Sbjct: 8   YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQNDELFNIKYQEQMKIF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W    G+ IDQ+ +I++ ++ +P SRR IVSAW
Sbjct: 128 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNIIEQIKTNPDSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHFEQ + QLSR+    P + +NP    +L F  +D  L  Y 
Sbjct: 248 LELGEFVHTLGDAHIYKNHFEQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLIDYN 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|227529200|ref|ZP_03959249.1| thymidylate synthase [Lactobacillus vaginalis ATCC 49540]
 gi|227350875|gb|EEJ41166.1| thymidylate synthase [Lactobacillus vaginalis ATCC 49540]
          Length = 320

 Score =  283 bits (723), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL L ++V+  G  + DRTG GT+S FGYQMRF+L +GFPLLTTKKV +  +  ELLW
Sbjct: 8   QQYLSLAQYVLDHGHTKSDRTGTGTKSVFGYQMRFNLEEGFPLLTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIQFLLKHKNHIWDEWAFKKWVESDEYHGPDMTDFGHRWLKDPEFKKAYLKEKR 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W   +G  IDQI++++  ++  P SRR IVS
Sbjct: 128 DFCERIVNDDEFAKKYGDLGLVYGSQWRHWKTSNGQTIDQIANVIDQIKTTPDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDISSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q G+F+HTLGD H+Y NH  Q   QLSR+P   P++I+      +  +   D  L  
Sbjct: 248 CGLQVGDFVHTLGDAHIYLNHLSQIKEQLSRTPHKAPKLILPDEPKPIDEYEMSDIKLEG 307

Query: 252 YEPHAAILAKVSV 264
           Y    AI A V+V
Sbjct: 308 YTHEPAIKAPVAV 320


>gi|93279921|pdb|2G86|A Chain A, L. Casei Thymidylate Synthase Y261f In Complex With
           Substrate, Dump
          Length = 316

 Score =  283 bits (723), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HL+ NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLFVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|157834185|pdb|1VZA|A Chain A, Thymidylate Synthase E60d Mutant Binary Complex With 2'-
           Deoxyuridine 5'-Monophosphate (Dump)
          Length = 316

 Score =  283 bits (723), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  +LLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSDLLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKAPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|298345140|ref|YP_003717827.1| thymidylate synthase [Mobiluncus curtisii ATCC 43063]
 gi|315656496|ref|ZP_07909385.1| thymidylate synthase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|298235201|gb|ADI66333.1| thymidylate synthase [Mobiluncus curtisii ATCC 43063]
 gi|315493055|gb|EFU82657.1| thymidylate synthase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 272

 Score =  283 bits (723), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 135/263 (51%), Positives = 183/263 (69%), Gaps = 2/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DLL  ++  G ++ DRTG GTRS FG Q+R+DLS+GFP +TTK ++W  VV ELLW
Sbjct: 12  HQYEDLLADIMSHGVEKPDRTGTGTRSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G +N  +L  + + IWDEWAD+ G+LGPIYG QWR+WP   G V DQ+  ++++L+ 
Sbjct: 72  FLQGGTNNRWLQENNIHIWDEWADESGDLGPIYGHQWRAWPTAAGPV-DQVKKLLETLQN 130

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV+ +D+MAL PCH  FQ +V  G+LS Q+YQRS D+FLG+PFNIASY
Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA     Q GE + T GD H+Y+NH +Q  LQLSR P   P + ++     +  
Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFPILELD-KAESIDG 249

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + ++   L +Y+ H  I A V+V
Sbjct: 250 YTFDMIRLANYQHHPKISAPVAV 272


>gi|256847163|ref|ZP_05552609.1| thymidylate synthase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715827|gb|EEU30802.1| thymidylate synthase [Lactobacillus coleohominis 101-4-CHN]
          Length = 320

 Score =  283 bits (723), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 144/313 (46%), Positives = 185/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL R+V++ G  + DRTG GTRS FGYQMRFDL KGFP+LTTKKV +  +  ELLW
Sbjct: 8   QQYLDLARYVLENGHLKGDRTGTGTRSIFGYQMRFDLQKGFPILTTKKVAFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIRFLLQHNNHIWDEWAFKKWVTSAEYQGPDMTDFGHRWLSDPDFKEQYLAEKK 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWRSW    G+ IDQI +++  ++ +P SRR IVS
Sbjct: 128 QFCQRVLNDDEFAKKYGDLGLVYGSQWRSWRTSRGDTIDQIQNVINEIKKNPNSRRLIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIARE 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
              + G+F+HTLGD H+YNNH +Q   QL R   + P++I       L  +  +D  L  
Sbjct: 248 CQLEVGDFVHTLGDAHIYNNHIKQIKEQLMRQVHSAPKLIFPNGTKSLDEYTVDDIKLDG 307

Query: 252 YEPHAAILAKVSV 264
           Y+   AI A V+V
Sbjct: 308 YQHEPAIKAPVAV 320


>gi|157833915|pdb|1TDA|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal
           Deletion: Role Of The C-Terminus In Alignment Of DUMP
           AND Ch2h4folate
 gi|157833916|pdb|1TDB|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal
           Deletion: Role Of The C-Terminus In Alignment Of DUMP
           AND Ch2h4folate
 gi|157833917|pdb|1TDC|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal
           Deletion: Role Of The C-Terminus In Alignment Of DUMP
           AND Ch2h4folate
 gi|157836378|pdb|2TDD|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal
           Deletion: Role Of The C-Terminus In Alignment Of DUMP
           AND Ch2h4folate
          Length = 315

 Score =  283 bits (723), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/310 (46%), Positives = 186/310 (60%), Gaps = 50/310 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVS 263
           P+ AI A V+
Sbjct: 306 PYPAIKAPVA 315


>gi|157832139|pdb|1NJC|A Chain A, Thymidylate Synthase, Mutation, N229d With
           2'-Deoxycytidine 5'-Monophosphate (Dcmp)
 gi|157832140|pdb|1NJD|A Chain A, Thymidylate Synthase, Mutation, N229d With 2'-Deoxyuridine
           5'-Monophosphate (Dump)
          Length = 316

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF+IASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFDIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|116629487|ref|YP_814659.1| thymidylate synthase [Lactobacillus gasseri ATCC 33323]
 gi|311110868|ref|ZP_07712265.1| thymidylate synthase [Lactobacillus gasseri MV-22]
 gi|122273575|sp|Q044A1|TYSY_LACGA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116095069|gb|ABJ60221.1| thymidylate synthase [Lactobacillus gasseri ATCC 33323]
 gi|311066022|gb|EFQ46362.1| thymidylate synthase [Lactobacillus gasseri MV-22]
          Length = 318

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V +  +  ELLWFL
Sbjct: 8   YLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L  H   IWDEWA                                       
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMKKF 127

Query: 85  ------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                 D+D     G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVSAW
Sbjct: 128 DERILADRDFAVKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y NHF+Q    L+R P   P++ +NP+   +  F   D  L  Y+
Sbjct: 248 LKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVDYK 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|259046573|ref|ZP_05736974.1| thymidylate synthase [Granulicatella adiacens ATCC 49175]
 gi|259036738|gb|EEW37993.1| thymidylate synthase [Granulicatella adiacens ATCC 49175]
          Length = 315

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 143/312 (45%), Positives = 179/312 (57%), Gaps = 50/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY +LL  +++ G+ + DRTG GT+S FGYQMRFDL KGFPLLTTK+V +  +  ELLWF
Sbjct: 4   QYKELLTKILEEGTTKTDRTGTGTKSIFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWF 63

Query: 63  LRGDSNVSYLHRHGVSIWDEWA-----------------------------------DKD 87
           L GD+N+ YL  H   IWDEWA                                    KD
Sbjct: 64  LHGDTNIKYLLEHNNHIWDEWAFERYVSSPKYTGPDMTDFGRRCLQDEAFNEVYQEVKKD 123

Query: 88  ---------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                          GELG IYG QWR W    G  IDQI  ++  L+  P SRR IVSA
Sbjct: 124 FCEKILSDDAFAAEFGELGNIYGSQWRHWKTSKGETIDQIEDLLNLLKNSPDSRRMIVSA 183

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A+ +
Sbjct: 184 WNPEDVPSMALPPCHTMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIANEV 243

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEF+HTLGD H+Y NH EQ   QL+R    LP +++      +      D  +  Y
Sbjct: 244 GLEVGEFVHTLGDAHIYLNHMEQVKTQLAREEMALPTLVLKHPEKSMFDIDVTDVVVEGY 303

Query: 253 EPHAAILAKVSV 264
           + H  I A ++V
Sbjct: 304 QSHPTIKAPIAV 315


>gi|238852637|ref|ZP_04643047.1| thymidylate synthase [Lactobacillus gasseri 202-4]
 gi|238834783|gb|EEQ27010.1| thymidylate synthase [Lactobacillus gasseri 202-4]
          Length = 318

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 182/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V +  +  ELLWFL
Sbjct: 8   YLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVSAW
Sbjct: 128 DERILADQDFAVKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y NHF+Q    L+R P   P++ +NP+   +  F   D  L  Y+
Sbjct: 248 LKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVDYK 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|157834023|pdb|1TSX|A Chain A, Thymidylate Synthase R179e Mutant
          Length = 316

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR  IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRELIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|295426056|ref|ZP_06818726.1| thymidylate synthase [Lactobacillus amylolyticus DSM 11664]
 gi|295064225|gb|EFG55163.1| thymidylate synthase [Lactobacillus amylolyticus DSM 11664]
          Length = 319

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 146/312 (46%), Positives = 185/312 (59%), Gaps = 51/312 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTG GT+S FG QMRFDLSKGFPLLTTK+V +  +  ELLWFL
Sbjct: 8   YLDLLQKIMTEGHDKSDRTGTGTKSLFGAQMRFDLSKGFPLLTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L +H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLQHKNHIWDEWAFKNWVNSDEYQGPDMTDFGLRCQSDPDFNKIYQEEMKRF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGN-VIDQISSIVQSLRADPYSRRHIVSA 132
                         G LG +YG QWR W   DGN  IDQI ++++ ++  P SRR IV+A
Sbjct: 128 DQRILDDEDFAKKYGNLGDVYGAQWRHWEKRDGNGFIDQIHNVIEQIKHTPDSRRMIVTA 187

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +   ALPPCH +FQFY+ +GKLS QLYQRSGD+FLG+PFNIASYSLL  M+A   
Sbjct: 188 WNPEDVPNSALPPCHVMFQFYIADGKLSVQLYQRSGDMFLGVPFNIASYSLLLNMIARET 247

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEFIHTLGD H+Y NHF+Q +  LSR P   PQ+ +NP+   +  F   D  +  Y
Sbjct: 248 GLEVGEFIHTLGDAHIYRNHFKQVEELLSRKPYDSPQLWLNPDKKKIEDFEMSDIKVLDY 307

Query: 253 EPHAAILAKVSV 264
           + H  I A V+V
Sbjct: 308 KHHDTIKAPVAV 319


>gi|118781473|ref|XP_311491.3| AGAP010457-PA [Anopheles gambiae str. PEST]
 gi|116129966|gb|EAA07160.3| AGAP010457-PA [Anopheles gambiae str. PEST]
          Length = 302

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 139/282 (49%), Positives = 184/282 (65%), Gaps = 21/282 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLWF 62
           YL L+R +I  GS R DRTGVGT S FG QMRF L  G  PLLTTKKV ++ V  ELLWF
Sbjct: 21  YLQLIRDIINKGSKRLDRTGVGTLSIFGAQMRFSLRDGIIPLLTTKKVFFRGVAEELLWF 80

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------P 102
           ++G +NV  L   GV IWD     E+ D       ++G+LGP+YG QWR +         
Sbjct: 81  IKGSTNVKDLQAKGVRIWDGNSTREYLDSCGFTDREEGDLGPVYGFQWRHFGATYKTCHD 140

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  IDQ++ ++  ++ +PY RR I+ AWN + I  MALPPCHCL QF+V +G+LSCQ
Sbjct: 141 DYTGQGIDQLAEVIDKIKNNPYDRRIIMCAWNPSDIPNMALPPCHCLAQFFVSDGELSCQ 200

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS DV LG+PFNIASYSLLT M+A V G + GEFIHT GD H+Y NH +    Q+ R
Sbjct: 201 MYQRSADVGLGVPFNIASYSLLTHMIAHVTGLKAGEFIHTTGDTHIYLNHVDGLREQIER 260

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +P+  P ++    +  + +F Y+DF + +Y P +AI  K++V
Sbjct: 261 TPKKFPTLVFKRKVESIDNFTYDDFEILNYNPQSAIKMKMAV 302


>gi|241781388|ref|XP_002400276.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
 gi|215510710|gb|EEC20163.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
          Length = 287

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 137/284 (48%), Positives = 181/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL  L+H+++ G  ++DRTGVGT S FG Q R+ L  G  PLLTTK+V W+ VV ELL
Sbjct: 4   YQYLKTLKHILENGKKKKDRTGVGTMSIFGVQCRYSLRNGTMPLLTTKRVFWRGVVEELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR--------S 100
           WFLRG ++   L   G+ IWD+   +            +G+LGP+YG QWR        S
Sbjct: 64  WFLRGSTDAKELSERGIHIWDQNGSRRFLDSLGFFDREEGDLGPVYGFQWRHFGATYRNS 123

Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    +DQI+ +V+ ++ DP  RR I+ +WN   I KM LPPCHCL QFYVD+ +LS
Sbjct: 124 HTDYGNEGVDQITRLVEIIKNDPNDRRMILCSWNPTDIKKMVLPPCHCLAQFYVDDDELS 183

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V G + GEF+H LGD H+Y NH E    QL
Sbjct: 184 CQLYQRSADMGLGVPFNIASYALLTHMMAKVTGKRPGEFVHNLGDAHIYLNHVESVKQQL 243

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I  ++ D+  FR +DF L  Y P+  I  ++SV
Sbjct: 244 EREPRPFPKLRIRRDVTDIFDFRCDDFELIDYNPYPKIKMEMSV 287


>gi|149635254|ref|XP_001508361.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase)
           [Ornithorhynchus anatinus]
          Length = 313

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 136/282 (48%), Positives = 180/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  +RH+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQVRHILRSGCKKEDRTGTGTVSVFGLQARYSLRDQFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSAKGVRIWDANGSRDFLDKHGFTSREEGDLGPVYGFQWRHFGAEYKEMNT 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++A+P  RR I+ AWN   I  MALPPCH L QFYV NG+LSCQ
Sbjct: 152 DYAGQGVDQLQKVIDTIKANPDDRRIIMCAWNPKDIPLMALPPCHALCQFYVLNGELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASYSLLT M+A + G + G+F+HTLGD H+Y NH E  ++QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLEVQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH AI  +++V
Sbjct: 272 EPRPFPRLKILRQVETIDDFKAEDFQIEDYNPHPAIKMEMAV 313


>gi|93279924|pdb|2G8D|A Chain A, Lactobacillus Casei Thymidylate Synthase Y261w-Dump
           Complex
          Length = 316

 Score =  282 bits (721), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HL+ NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLWVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|227893421|ref|ZP_04011226.1| thymidylate synthase [Lactobacillus ultunensis DSM 16047]
 gi|227864836|gb|EEJ72257.1| thymidylate synthase [Lactobacillus ultunensis DSM 16047]
          Length = 318

 Score =  282 bits (721), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 182/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRFDLSKGFPLLTTK+V +  +  ELLWFL
Sbjct: 8   YLDLLNKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHHNHIWDEWAFKNWVTSEEYDGPDMTDFGLRSQSDPEFNKIYQTEMKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   DG  IDQI+++++ ++  P SRR IV+AW
Sbjct: 128 DQRILDDEAFAVKYGNLGDVYGAQWRHWQKRDGGFIDQIANVIKQIKETPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL  M+A   G
Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARKTG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF Q    LSR P   PQ+ +NP+   +  F  +D  +  Y+
Sbjct: 248 LKVGEFVHTLGDAHIYRNHFNQVKELLSRKPYDSPQLWLNPDKKHIEDFEMQDIKVIDYK 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|157831561|pdb|1JMI|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
 gi|157834041|pdb|1TVW|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
          Length = 316

 Score =  282 bits (721), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF+IASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFSIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|6729992|pdb|1BO7|A Chain A, Thymidylate Synthase R179t Mutant
          Length = 316

 Score =  282 bits (721), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR  IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRTLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|6729993|pdb|1BO8|A Chain A, Thymidylate Synthase R178t Mutant
          Length = 316

 Score =  282 bits (721), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYS R IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSTRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|303387989|ref|XP_003072229.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Encephalitozoon intestinalis ATCC 50506]
 gi|303388249|ref|XP_003072359.1| thymidylate synthase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301368|gb|ADM10869.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Encephalitozoon intestinalis ATCC 50506]
 gi|303301498|gb|ADM10999.1| thymidylate synthase [Encephalitozoon intestinalis ATCC 50506]
          Length = 294

 Score =  282 bits (721), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 140/285 (49%), Positives = 186/285 (65%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDL+ H+++ G  R+DRTG GT S FG  MRF L    FPLLTTK+V +K +V ELL
Sbjct: 10  HQYLDLIAHILEKGVKRQDRTGTGTLSIFGASMRFSLEDNTFPLLTTKRVFYKGIVEELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWR--------SW 101
           +FLR  ++ + L + GV IW +   K           +G+LGPIYG QWR        S 
Sbjct: 70  FFLRAQTDSAILEKKGVMIWKKNGSKQFLQSMGLDREEGDLGPIYGFQWRHFGAEYQTSS 129

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  IDQI  +++S++ +P SRR +V AWN   + KMALPPCH LFQF V +GKL+C
Sbjct: 130 SDYKGQGIDQIRDVIESIKNNPESRRMVVCAWNPLALPKMALPPCHVLFQFNVMDGKLNC 189

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRSGD+ LG+PFNIASYSLLT+++A + G + GEF+H LGD H+Y +H +   LQL 
Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTIIIAHLTGLRPGEFVHFLGDAHVYLDHIDSLRLQLQ 249

Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P++ +NP    V++  F +EDF L  Y PH  I   +SV
Sbjct: 250 RTPREFPKLFVNPKGTRVEIEDFEFEDFELVGYNPHPPIQMNMSV 294


>gi|157834021|pdb|1TSV|A Chain A, Thymidylate Synthase R179a Mutant
 gi|157834022|pdb|1TSW|A Chain A, Thymidylate Synthase R179a Mutant
          Length = 316

 Score =  282 bits (721), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR  IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRALIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|157831559|pdb|1JMG|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
          Length = 316

 Score =  281 bits (720), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFGIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|195116595|ref|XP_002002839.1| GI10845 [Drosophila mojavensis]
 gi|193913414|gb|EDW12281.1| GI10845 [Drosophila mojavensis]
          Length = 310

 Score =  281 bits (720), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 137/285 (48%), Positives = 183/285 (64%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL++ +I+ G +R DRT VGTRS FG QMRF+L   FPLLTTK+V ++ V  EL+W
Sbjct: 26  EQYLDLIKRIIENGDERMDRTKVGTRSIFGAQMRFNLRDSFPLLTTKRVFFRGVAEELIW 85

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101
           F+ G ++   L    + IWD     E+ DK G       +LGP+YG QWR +        
Sbjct: 86  FIAGQTDAKILQEKNIHIWDGNSTREFLDKCGHTDREVGDLGPVYGFQWRHFGAKYGKCT 145

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159
            DY G  IDQ+  ++ ++R DP  RR I+SAWN   I +MALPPCHCL QFYV    G+L
Sbjct: 146 DDYTGQGIDQLKQVIDTIRNDPADRRIIMSAWNPLDIPQMALPPCHCLAQFYVSQSRGEL 205

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+YNNH      Q
Sbjct: 206 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYNNHVNPLLEQ 265

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + R PR  P+++    + ++  FRYEDF +  Y P+  I  +++V
Sbjct: 266 MKREPRPFPKLVFKRQVTNIEDFRYEDFEIVGYNPYGKIQMEMAV 310


>gi|226500582|ref|NP_001152378.1| LOC100286018 [Zea mays]
 gi|195655695|gb|ACG47315.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea
           mays]
          Length = 523

 Score =  281 bits (720), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 134/283 (47%), Positives = 183/283 (64%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L+  +I+FG+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW
Sbjct: 241 YQYLNLVEDIIRFGAQKNDRTGTGTLSKFGCQMRFNLRKIFPLLTTKRVFWRGVVEELLW 300

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ G +N   L   G+ IWD     E+ D+       +G+LGP+YG QWR +        
Sbjct: 301 FISGSTNAKVLQEKGIHIWDGNASREYLDRIGLAHREEGDLGPVYGFQWRHFGAEYTDMH 360

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN + + KMALPPCH   QFYV+NG+LSC
Sbjct: 361 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVENGELSC 420

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     G+F+H +GD H+Y NH    + Q+ 
Sbjct: 421 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRNHVRALEEQIQ 480

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP+  D+ SF   DF L  Y+PH  +  K++V
Sbjct: 481 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKLEMKMAV 523


>gi|326917497|ref|XP_003205035.1| PREDICTED: LOW QUALITY PROTEIN: thymidylate synthase-like
           [Meleagris gallopavo]
          Length = 397

 Score =  281 bits (720), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 138/280 (49%), Positives = 179/280 (63%), Gaps = 20/280 (7%)

Query: 5   LDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR 64
           L  +RH+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF++
Sbjct: 118 LQQVRHILQHGXPKEDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWFIK 177

Query: 65  GDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PDY 104
           G +N   L   GV IWD     E+ DK       +G+LGP+YG QWR +         DY
Sbjct: 178 GSTNAKELSAKGVKIWDANGSREFLDKQGFCSREEGDLGPVYGFQWRHFGAEYKDMHTDY 237

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
               +DQ+  +++ ++ +P  RR I+ AWN   I  MALPPCH L QFYV NG+LSCQLY
Sbjct: 238 SNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQLY 297

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E   +QL R P
Sbjct: 298 QRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQREP 357

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R LP++ I   + D+  F+ EDF +  Y PH  I  +++V
Sbjct: 358 RPLPKLKILRKVEDISDFKAEDFQIEDYNPHPPIKMEMAV 397


>gi|157831558|pdb|1JMF|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
 gi|157834039|pdb|1TVU|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
          Length = 316

 Score =  281 bits (720), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFAIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|93279923|pdb|2G8A|A Chain A, Lactobacillus Casei Y261m In Complex With Substrate, Dump
          Length = 316

 Score =  281 bits (720), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HL  NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLMVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|12045082|ref|NP_072893.1| thymidylate synthase [Mycoplasma genitalium G37]
 gi|1351340|sp|P47469|TYSY_MYCGE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|3844830|gb|AAC71448.1| thymidylate synthase [Mycoplasma genitalium G37]
 gi|166078915|gb|ABY79533.1| thymidylate synthase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 287

 Score =  281 bits (720), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 136/293 (46%), Positives = 189/293 (64%), Gaps = 35/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL  +V+  G  R++RT   T S FGYQM+FDL+  FPLLTTKKV+WK++VHELL
Sbjct: 1   MKQYLDLASYVLANGKKRKNRTDTDTLSVFGYQMKFDLTNSFPLLTTKKVNWKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL  +GV+IW+EW                             A +  +LG
Sbjct: 61  WFIKGDTNIKYLVDNGVNIWNEWPYENFKKSPSFQNETLQEFILKVKTDNEFAKQFADLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++     N +DQ+  ++Q ++ +P SRR IVS+WN + ++KMAL PCH LFQ
Sbjct: 121 PVYGKQWRNF-----NGVDQLKKVIQEIKENPNSRRLIVSSWNPSELEKMALAPCHSLFQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV+  KLS QLYQRSGD+FLG+PFNIASY+LL  ++A     + G FIHTLGD H+Y N
Sbjct: 176 FYVEEDKLSLQLYQRSGDIFLGVPFNIASYALLVYLVAHETKLKPGYFIHTLGDAHIYEN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ  LQL+R+    PQ+++  +   + ++ ++D  L  Y  H  I  +V+V
Sbjct: 236 HIEQIKLQLTRTTLDPPQVVLKSD-KSIFAYSFDDIELVGYNYHPFIYGRVAV 287


>gi|315655589|ref|ZP_07908487.1| thymidylate synthase [Mobiluncus curtisii ATCC 51333]
 gi|315489653|gb|EFU79280.1| thymidylate synthase [Mobiluncus curtisii ATCC 51333]
          Length = 272

 Score =  281 bits (719), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 136/264 (51%), Positives = 184/264 (69%), Gaps = 4/264 (1%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DLL  ++  G D+ DRTG GT S FG Q+R+DLS+GFP +TTK ++W  VV ELLW
Sbjct: 12  HQYEDLLADIMSQGIDKSDRTGTGTHSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G +N  +L  + + IWDEWA++ G+LGPIYG QWR+WP   G V DQ+  ++++L+ 
Sbjct: 72  FLQGGTNNHWLQENNIHIWDEWANESGDLGPIYGHQWRAWPTAAGPV-DQVKKLLETLQN 130

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV+ +D+MAL PCH  FQ +V  G+LS Q+YQRS D+FLG+PFNIASY
Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL- 240
           +LLT MLA     Q GE + T GD H+Y+NH +Q  LQLSR P   P  I+  +  D + 
Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFP--ILELDKADSID 248

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++   L++Y+ H  I A V+V
Sbjct: 249 GYTFDMIRLKNYQHHPKISAPVAV 272


>gi|93279922|pdb|2G89|A Chain A, L. Casei Thymidylate Synthase Y261a In Complex With
           Substrate, Dump
          Length = 316

 Score =  281 bits (719), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HL  NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLAVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|161507385|ref|YP_001577339.1| thymidylate synthase [Lactobacillus helveticus DPC 4571]
 gi|260101724|ref|ZP_05751961.1| thymidylate synthase [Lactobacillus helveticus DSM 20075]
 gi|172048271|sp|A8YUW0|TYSY_LACH4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|160348374|gb|ABX27048.1| Thymidylate synthase [Lactobacillus helveticus DPC 4571]
 gi|260084460|gb|EEW68580.1| thymidylate synthase [Lactobacillus helveticus DSM 20075]
 gi|328467983|gb|EGF39009.1| thymidylate synthase [Lactobacillus helveticus MTCC 5463]
          Length = 318

 Score =  281 bits (719), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 182/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G  + DRTG GTRS FG QMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLDLLQKIMSEGHGKDDRTGTGTRSYFGAQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVNSSEYQGPDMTDFGLRSQSDPEFNKIYQAEMKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W   +G  IDQI+ +++ ++  P SRR IV+AW
Sbjct: 128 DQRILDDEDFAKKYGNLGDVYGAQWRHWEKREGGFIDQIADVIKQIKETPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNLIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEFIHTLGD H+Y NH +Q +  LSR P   PQ+ +NP   ++  F  +D  +  Y+
Sbjct: 248 LQVGEFIHTLGDAHIYRNHLKQVEELLSRKPYDSPQLWLNPEKKNIADFEMKDIKVVDYQ 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|296125219|ref|YP_003632471.1| thymidylate synthase [Brachyspira murdochii DSM 12563]
 gi|296017035|gb|ADG70272.1| thymidylate synthase [Brachyspira murdochii DSM 12563]
          Length = 266

 Score =  281 bits (719), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 137/266 (51%), Positives = 178/266 (66%), Gaps = 2/266 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
           M  YL+LL+ V++ G +  DRTGVGTR  F  Q+RF       P++TTK+V  K V+ EL
Sbjct: 1   MKNYLELLKKVLEEGEETLDRTGVGTRRIFAPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           LWFL+G +N+ +L  + V IWDEWAD  GELGP+YG QWR+W   +GN IDQIS+IV +L
Sbjct: 61  LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNIVNTL 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNI 178
           R +P SRR+I++AWNV  IDKM LPPCH + QF V+N G +   LYQRS D+FLG+PFNI
Sbjct: 121 RNNPTSRRNILNAWNVGEIDKMHLPPCHMMCQFSVNNKGGIIAHLYQRSADLFLGVPFNI 180

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           +SY++LT +LA   G    E I T GD H+YNNH EQ  LQLSR P      +   N  +
Sbjct: 181 SSYAILTRLLAMHSGLHASELIMTFGDAHIYNNHIEQVKLQLSREPYENTTELFIENRPN 240

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           + S  YEDF L  Y+ +  I  +V+V
Sbjct: 241 IFSHVYEDFRLEGYKYYPTIKGEVAV 266


>gi|195470923|ref|XP_002087756.1| GE14974 [Drosophila yakuba]
 gi|194173857|gb|EDW87468.1| GE14974 [Drosophila yakuba]
          Length = 321

 Score =  281 bits (719), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 141/284 (49%), Positives = 183/284 (64%), Gaps = 22/284 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLLR +I  G  R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V  ELLWF
Sbjct: 38  QYLDLLRQIIANGEQRMDRTQVGTLSLFGSQMRFDMRQSFPLLTTKRVFFRAVAEELLWF 97

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------P 102
           + G ++   L    V IWD     E+ DK        G+LGP+YG QWR +         
Sbjct: 98  VAGKTDAKLLQAKNVHIWDGNSTREFLDKLGFTERAVGDLGPVYGFQWRHFGAEYATCDD 157

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLS 160
           DY G  IDQ+  ++ +++ +P  RR I+SAWN   I KMALPPCHCL QFYV    G+LS
Sbjct: 158 DYSGKGIDQLRQVIDTIKNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGELS 217

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    QL
Sbjct: 218 CQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQL 277

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+PR  P++II   + D+  FR+EDF +  Y P+  I   ++V
Sbjct: 278 QRTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPYPKIKMDMAV 321


>gi|229822730|ref|ZP_04448800.1| hypothetical protein GCWU000282_00018 [Catonella morbi ATCC 51271]
 gi|229787543|gb|EEP23657.1| hypothetical protein GCWU000282_00018 [Catonella morbi ATCC 51271]
          Length = 313

 Score =  281 bits (719), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 146/314 (46%), Positives = 185/314 (58%), Gaps = 51/314 (16%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L+R ++  G  + DRTGVGT+S FGYQMRFDLS GFP++TTK+V +  +  ELL
Sbjct: 1   MQQYQELVRKILAEGHVKTDRTGVGTKSLFGYQMRFDLSHGFPMVTTKRVPFGLIKSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFLRGD+NV YL  H   IWDEWA                                    
Sbjct: 61  WFLRGDTNVRYLLEHNNHIWDEWAFKRYVESPDYHGPDMTDFGLRAVADPDFNEIYQQEL 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         ++ G LG +YG QWRSWP  +G  +DQIS ++  ++  P SRR IV
Sbjct: 121 AAFNERVLTDDDFAERYGNLGNVYGAQWRSWPLRNGETLDQISQLIDMIKHSPDSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDVPSMALPPCHTLFQFYVYDGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAK 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
               + G+F+HTLGD HLY NH E A+  LSR P+ LPQ+ I+ +         +   L+
Sbjct: 241 ECDLEVGDFVHTLGDAHLYLNHLEAAETLLSREPKPLPQLEID-DFEQFDQVSTDQIRLQ 299

Query: 251 SYEPHAAILAKVSV 264
            YEP   I A ++V
Sbjct: 300 GYEPWPTIKAPIAV 313


>gi|327269847|ref|XP_003219704.1| PREDICTED: thymidylate synthase-like [Anolis carolinensis]
          Length = 307

 Score =  281 bits (719), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 134/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+ ++ +++FG  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 26  QYLNQIQQILRFGHKKEDRTGTGTLSLFGMQARYSLRDDFPLLTTKRVFWKGVLEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IW+    +            +G+LGP+YG QWR +         
Sbjct: 86  IKGSTNAKELSTKGVKIWEANGSRQFLDQQGFLSREEGDLGPVYGFQWRHFGAEYKDMNT 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ ++R +P  RR I+ AWN   I  MALPPCH L QFYV NG+LSCQ
Sbjct: 146 DYTGQGVDQLQQVIDTIRNNPDDRRIIMCAWNPKDISAMALPPCHALCQFYVVNGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E   +QL R
Sbjct: 206 LYQRSGDMGLGVPFNIASYSLLTSMIAHVTGLKPGEFIHTLGDAHIYLNHIEPLKIQLQR 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   + ++  F+ +DF +  Y PH  I  +++V
Sbjct: 266 QPRPFPKLKILRKVENINDFKADDFEIEGYNPHPTIKMEMAV 307


>gi|227877073|ref|ZP_03995156.1| thymidylate synthase [Lactobacillus crispatus JV-V01]
 gi|256850330|ref|ZP_05555759.1| thymidylate synthase [Lactobacillus crispatus MV-1A-US]
 gi|262045992|ref|ZP_06018956.1| thymidylate synthase [Lactobacillus crispatus MV-3A-US]
 gi|227863321|gb|EEJ70757.1| thymidylate synthase [Lactobacillus crispatus JV-V01]
 gi|256712967|gb|EEU27959.1| thymidylate synthase [Lactobacillus crispatus MV-1A-US]
 gi|260573951|gb|EEX30507.1| thymidylate synthase [Lactobacillus crispatus MV-3A-US]
          Length = 318

 Score =  281 bits (719), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 182/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWIESAEYQGADMTDFGLRSQSDPEFNQVYQAEMKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W    G  IDQI+++++ ++  P SRR IV+AW
Sbjct: 128 DQRILDDPAFAQKYGNLGDVYGAQWRHWEKRSGGFIDQIANVIKQIKETPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  M+A   G
Sbjct: 188 NPEDIPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF Q    LSR+P   P++ +NP    +  F  +D  + +Y+
Sbjct: 248 LKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLNYQ 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|6980894|pdb|1BP0|A Chain A, Thymidylate Synthase R23i Mutant
          Length = 316

 Score =  281 bits (719), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + D T  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDITHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|309809295|ref|ZP_07703164.1| thymidylate synthase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170408|gb|EFO72432.1| thymidylate synthase [Lactobacillus iners SPIN 2503V10-D]
          Length = 318

 Score =  281 bits (718), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V +  +  ELLWFL
Sbjct: 8   YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMKIF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W    G+ IDQ+ ++++ ++ +P SRR IVSAW
Sbjct: 128 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF+Q + QLSR+    P + +NP    +L F  +D  L  Y 
Sbjct: 248 LELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLIDYN 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|157832137|pdb|1NJA|A Chain A, Thymidylate Synthase, Mutation, N229c With
           2'-Deoxycytidine 5'-Monophosphate (Dcmp)
 gi|157832138|pdb|1NJB|A Chain A, Thymidylate Synthase
 gi|157834040|pdb|1TVV|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
          Length = 316

 Score =  281 bits (718), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFCIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|282850793|ref|ZP_06260167.1| thymidylate synthase [Lactobacillus gasseri 224-1]
 gi|282557745|gb|EFB63333.1| thymidylate synthase [Lactobacillus gasseri 224-1]
          Length = 318

 Score =  281 bits (718), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 182/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V +  +  ELLWFL
Sbjct: 8   YLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L  H   IWDEWA                                       
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMKKF 127

Query: 85  ------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                 D+D     G LG +Y  QWR W   +G  IDQI +++  ++  PYSRR IVSAW
Sbjct: 128 DERILADRDFAVKFGNLGDVYAAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y NHF+Q    L+R P   P++ +NP+   +  F   D  L  Y+
Sbjct: 248 LKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVDYK 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|323941564|gb|EGB37745.1| thymidylate synthase [Escherichia coli E482]
          Length = 219

 Score =  281 bits (718), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 124/202 (61%), Positives = 161/202 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHT 202
           Y+LL  M+A     + G+F+ T
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWT 202


>gi|262198580|ref|YP_003269789.1| thymidylate synthase [Haliangium ochraceum DSM 14365]
 gi|262081927|gb|ACY17896.1| thymidylate synthase [Haliangium ochraceum DSM 14365]
          Length = 262

 Score =  281 bits (718), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 141/264 (53%), Positives = 173/264 (65%), Gaps = 2/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+R +++ G  R DRTG GT S FG Q+R+DL +GFPLLTTKKV + +VVHELL
Sbjct: 1   MTPYLDLVRRILEHGERREDRTGTGTLSLFGAQLRYDLREGFPLLTTKKVLFSAVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG +N+         IW+ WAD  GELGPIYG QWRSW   DG+ IDQI   +  +R
Sbjct: 61  WFLRGATNIHDGLAEHTPIWNAWADDSGELGPIYGAQWRSWRGPDGDSIDQIQGALDLIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  + +MALPPCH LFQFYV    L CQLYQRS D+ LG+PFNIAS
Sbjct: 121 TDPGSRRIIVSAWNVGELARMALPPCHLLFQFYVSGRHLDCQLYQRSADMALGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     +   FIHTLGD H+Y NH +  + QL R+P   P++ I      L 
Sbjct: 181 YALLLSMMAQSCDLEPRYFIHTLGDAHVYLNHVDGLERQLERTPYARPRVRIADK--SLF 238

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
              +ED  L  Y+ H  I  +V+V
Sbjct: 239 ELGFEDIELEGYQHHPFIKFEVAV 262


>gi|157831560|pdb|1JMH|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
          Length = 316

 Score =  280 bits (717), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFIIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|309803972|ref|ZP_07698055.1| thymidylate synthase [Lactobacillus iners LactinV 11V1-d]
 gi|308163974|gb|EFO66238.1| thymidylate synthase [Lactobacillus iners LactinV 11V1-d]
          Length = 318

 Score =  280 bits (717), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V +  +  ELLWFL
Sbjct: 8   YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMKIF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W    G+ IDQ+ ++++ ++ +P SRR IVSAW
Sbjct: 128 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF+Q + QLSR+    P + +NP    +L F  +D  L  Y 
Sbjct: 248 LELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLIDYN 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|327440143|dbj|BAK16508.1| thymidylate synthase [Solibacillus silvestris StLB046]
          Length = 325

 Score =  280 bits (716), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 140/320 (43%), Positives = 188/320 (58%), Gaps = 57/320 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           H YL+LL++++  G+D+ DRTG GTRS FGYQMRF+L +GFPLLTTK+V +K V  ELLW
Sbjct: 6   HTYLNLLQYILDNGTDKSDRTGTGTRSVFGYQMRFNLQEGFPLLTTKRVPFKLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL ++   IWDEWA                                     
Sbjct: 66  FIKGDTNIRYLLQNNNHIWDEWAFKKWVESEEYGGPDMSDFGRRSLIDEAFNVQYQKELS 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W   +G  IDQ+   +  ++ +P SRR IV+
Sbjct: 126 TFCERVLQDDEFASKYGDLGNVYGKQWRNWTTSEGESIDQLQDAIDLIKHNPDSRRIIVN 185

Query: 132 AWNVA-LID------KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           AWN   +ID      K ALPPCH +FQFYV  GKLSC L QRS D FLG+PFNIASY+LL
Sbjct: 186 AWNPEDVIDAGGKGSKAALPPCHAMFQFYVAEGKLSCMLTQRSADTFLGVPFNIASYALL 245

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRY 244
           T ++A   G + GEF+H++ D H+Y+NH EQ   QL+R P+ LP + +N     +  F  
Sbjct: 246 THLIAHECGLEVGEFVHSMADTHIYSNHLEQVKEQLAREPKQLPTLKLNLEKQSIFDFEM 305

Query: 245 EDFTLRSYEPHAAILAKVSV 264
           ED +L  Y PH +I A ++V
Sbjct: 306 EDISLEGYHPHPSIKAPIAV 325


>gi|256843019|ref|ZP_05548507.1| thymidylate synthase [Lactobacillus crispatus 125-2-CHN]
 gi|312977199|ref|ZP_07788947.1| thymidylate synthase [Lactobacillus crispatus CTV-05]
 gi|256614439|gb|EEU19640.1| thymidylate synthase [Lactobacillus crispatus 125-2-CHN]
 gi|310895630|gb|EFQ44696.1| thymidylate synthase [Lactobacillus crispatus CTV-05]
          Length = 318

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 181/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVQSPEYQGPDMTNFGLRSQSDPEFNQVYQAEMKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W    G  IDQI+ +++ ++  P SRR IV+AW
Sbjct: 128 DQRILDDPAFAQKYGNLGDVYGAQWRHWEKRTGGFIDQIADVIKQIKETPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  M+A   G
Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF Q    LSR+P   P++ +NP    +  F  +D  + +Y+
Sbjct: 248 LKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLNYQ 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|293380554|ref|ZP_06626614.1| thymidylate synthase [Lactobacillus crispatus 214-1]
 gi|290922892|gb|EFD99834.1| thymidylate synthase [Lactobacillus crispatus 214-1]
          Length = 318

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 181/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIRFLLEHNNYIWDEWAFKNWIESAEYQGADMTDFGLRSQSDPEFNQVYQAEMKKF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W    G  IDQI+ +++ ++  P SRR IV+AW
Sbjct: 128 DQRILDDPAFAQKYGNLGDVYGAQWRHWKKRTGGFIDQIADVIKQIKETPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  M+A   G
Sbjct: 188 NPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF Q    LSR+P   P++ +NP    +  F  +D  + +Y+
Sbjct: 248 LKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLNYQ 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|156406767|ref|XP_001641216.1| predicted protein [Nematostella vectensis]
 gi|156228354|gb|EDO49153.1| predicted protein [Nematostella vectensis]
          Length = 306

 Score =  280 bits (715), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 133/283 (46%), Positives = 184/283 (65%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLD++R++++ G+ + DRTG GT+S FG QMRF L  G FPLLTTK+V W+ V  ELLW
Sbjct: 24  QYLDMIRYIMENGTVKTDRTGTGTKSVFGAQMRFSLRDGVFPLLTTKRVFWRGVAEELLW 83

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101
           F++G +N   L    + IWD    +            +G+LGP+YG QWR +        
Sbjct: 84  FVKGCTNAKVLADKNIHIWDANGSRGFLDRQGLSHREEGDLGPVYGFQWRHFGAKYVDMH 143

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++ +P  RR I+ AWN + I  MALPPCH   QFYV NG+LSC
Sbjct: 144 TDYTGQGVDQLAQVIDKIKNNPDDRRIIMLAWNPSDIPLMALPPCHAFVQFYVANGELSC 203

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFNIASYSLLT M+A V G + G+F+H+LGD H+Y NHFE  + QL 
Sbjct: 204 QLYQRSGDMGLGVPFNIASYSLLTYMIAHVCGLKPGDFVHSLGDAHVYLNHFEALEEQLK 263

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P ++I   + D+  F ++DF +  Y+PH  I  +++V
Sbjct: 264 REPRAFPSLVIKRQVDDIDQFTFDDFEIVGYKPHPKIKMEMAV 306


>gi|317495262|ref|ZP_07953632.1| thymidylate synthase [Gemella moribillum M424]
 gi|316914684|gb|EFV36160.1| thymidylate synthase [Gemella moribillum M424]
          Length = 310

 Score =  280 bits (715), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 141/312 (45%), Positives = 192/312 (61%), Gaps = 56/312 (17%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL+L + +++ G  + DRTGVGT+S FGYQM+FDL+KGFPLLTTKK+++  V  ELLWF
Sbjct: 5   EYLNLCKTILENGITKDDRTGVGTKSIFGYQMKFDLNKGFPLLTTKKINFNLVWSELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWA------------------------DKD----------- 87
           ++GD+N+ +L  +  +IW+EWA                        DKD           
Sbjct: 65  IKGDTNIKFLLENKNNIWNEWAFKKWIESEEYTGPDMTDFGHRVLKDKDFAEEYKKQMNI 124

Query: 88  ---------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                          G+LG +YG QWR++     N IDQ+ ++++ ++ +P SRR IVSA
Sbjct: 125 FKENILNDDNFSTKFGDLGNVYGKQWRNF-----NGIDQLKNVIEQIKINPSSRRLIVSA 179

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN + +D MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASYSLLT+++A   
Sbjct: 180 WNPSEVDTMALPPCHTMFQFYVSDGKLSCQLYQRSADVFLGVPFNIASYSLLTILIAKEC 239

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEF+HTLGD H+Y NHFEQ   Q+SR    LP + +N     + +    D  L  Y
Sbjct: 240 GLEVGEFVHTLGDAHIYVNHFEQVKEQMSRDAFKLPSLRLNE-FDSIFNLEISDVELIDY 298

Query: 253 EPHAAILAKVSV 264
           E H  I A ++V
Sbjct: 299 ESHPFIKAPIAV 310


>gi|6729893|pdb|1BPJ|A Chain A, Thymidylate Synthase R178t, R179t Double Mutant
          Length = 316

 Score =  280 bits (715), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYS   IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSTTLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|126321851|ref|XP_001368094.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase)
           [Monodelphis domestica]
          Length = 335

 Score =  280 bits (715), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 134/282 (47%), Positives = 180/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H++++GS + DRTG GT S FG Q R++L   FPLLTTK+V WK V+ ELLWF
Sbjct: 54  QYLQQIEHILQYGSKKNDRTGTGTMSVFGMQARYNLRGEFPLLTTKRVFWKGVLEELLWF 113

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------P 102
           +RG +N   L   GV IWD     E+ D       ++G+LGP+YG QWR +         
Sbjct: 114 IRGCTNGKELSAKGVKIWDANGSREFLDNLGLTQREEGDLGPVYGFQWRHFGAEYKEMNT 173

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++  ++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 174 DYSGQGVDQLQKVIDKIKTNPDDRRLIMCAWNPKDLPLMALPPCHALCQFYVANGELSCQ 233

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASYSLLT M+A + G + G+F+H+LGD H+Y NH E   +QL R
Sbjct: 234 LYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFVHSLGDAHVYMNHIEPLKIQLQR 293

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I   ++V
Sbjct: 294 EPRPFPKLKILRKVESIDDFKAEDFLIEGYNPHPTIKMDMAV 335


>gi|330859629|emb|CBX69968.1| thymidylate synthase [Yersinia enterocolitica W22703]
          Length = 219

 Score =  280 bits (715), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 127/210 (60%), Positives = 160/210 (76%), Gaps = 1/210 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S +VQ L+
Sbjct: 61  WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           Y+LL  M+A       G+F+ T G +  Y 
Sbjct: 181 YALLVHMMAQQCDLAVGDFVWT-GAIRTYT 209


>gi|139472812|ref|YP_001129361.1| ORF70 [Human herpesvirus 8]
 gi|6686050|sp|P90463|TYSY_HHV8P RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|1718263|gb|AAC57092.1| ORF 70 [Human herpesvirus 8 type M]
 gi|1778600|gb|AAC56948.1| thymidylate synthase homolog [Human herpesvirus 8]
 gi|2246548|gb|AAB62673.1| ORF 70 [Human herpesvirus 8]
 gi|3551759|gb|AAC34940.1| thymidylate synthase [Human herpesvirus 8]
 gi|87196833|gb|ABD28859.1| ORF70 [Human herpesvirus 8]
 gi|261853484|gb|ACY00406.1| ORF70 [Human herpesvirus 8]
 gi|312275152|gb|ADQ57889.1| ORF70 protein [Human herpesvirus 8]
          Length = 337

 Score =  280 bits (715), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 143/282 (50%), Positives = 182/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  LR ++  GSDR DRTG+GT S FG Q R+ L   FPLLTTK+V W+ VV ELLWF
Sbjct: 56  QYLRQLREILCRGSDRLDRTGIGTLSLFGMQARYSLRDHFPLLTTKRVFWRGVVQELLWF 115

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           L+G ++   L R GV IWD+   ++            G+LGP+YG QWR +         
Sbjct: 116 LKGSTDSRELSRTGVKIWDKNGSREFLAGRGLAHRREGDLGPVYGFQWRHFGAAYVDADA 175

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G   DQ+S IV  ++ +P+ RR I+ AWN A +  MALPPCH L QFYV +G+LSCQ
Sbjct: 176 DYTGQGFDQLSYIVDLIKNNPHDRRIIMCAWNPADLSLMALPPCHLLCQFYVADGELSCQ 235

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASYSLLT MLA V G + GEFIHTLGD H+Y  H E   LQL+R
Sbjct: 236 LYQRSGDMGLGVPFNIASYSLLTYMLAHVTGLRPGEFIHTLGDAHIYKTHIEPLRLQLTR 295

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I  ++  +  F  +DF L  Y PH  I  +++V
Sbjct: 296 TPRPFPRLEILRSVSSMEEFTPDDFRLVDYCPHPTIRMEMAV 337


>gi|242068437|ref|XP_002449495.1| hypothetical protein SORBIDRAFT_05g016730 [Sorghum bicolor]
 gi|241935338|gb|EES08483.1| hypothetical protein SORBIDRAFT_05g016730 [Sorghum bicolor]
          Length = 521

 Score =  279 bits (714), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 133/283 (46%), Positives = 181/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L+  +I+ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW
Sbjct: 239 YQYLNLVEDIIRSGAQKNDRTGTGTMSKFGCQMRFNLRKNFPLLTTKRVFWRGVVEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+ G +N   L   G+ IWD     E+ D       ++G+LGP+YG QWR +        
Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN + + KMALPPCH   QFYV+NG+LSC
Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIIMSAWNPSDLKKMALPPCHMFAQFYVENGELSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     G+F+H +GD H+Y  H    + Q+ 
Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRTHVRALEEQIQ 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP+  D+ SF   DF L  Y+PH  I  K++V
Sbjct: 479 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKIEMKMAV 521


>gi|255077932|ref|XP_002502546.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Micromonas sp. RCC299]
 gi|226517811|gb|ACO63804.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Micromonas sp. RCC299]
          Length = 523

 Score =  279 bits (714), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 130/282 (46%), Positives = 183/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL++ +++ G+ + DRTG GT S FG QMRFDL + FPLLTTK+V W+ V  EL+WF
Sbjct: 242 QYLDLIKEIMEEGNVKGDRTGTGTISKFGCQMRFDLRRSFPLLTTKRVFWRGVAEELIWF 301

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------P 102
           ++G ++   L    + IWD     E+ D       ++G+LGP+YG QWR +         
Sbjct: 302 VKGCTSAKELQDKDIHIWDGNGSREYLDSVGLGHREEGDLGPVYGFQWRHFGAEYKDMHA 361

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ++ ++  ++ +P  RR +++AWN A + +MALPPCH   QFYV NG+LSCQ
Sbjct: 362 DYTGQGVDQLAEVIDKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSCQ 421

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H  GD H+Y+NH E    QL  
Sbjct: 422 MYQRSCDMGLGVPFNIASYSLLTCMVAQVCGLKPGDFVHCCGDTHVYSNHVEPLYKQLEN 481

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P + INP   D+ SF + DF +  Y+PH  I  +++V
Sbjct: 482 EPRPFPTLKINPEKKDIDSFEFSDFEIVDYDPHPKIAMQMAV 523


>gi|260783288|ref|XP_002586708.1| hypothetical protein BRAFLDRAFT_77468 [Branchiostoma floridae]
 gi|229271831|gb|EEN42719.1| hypothetical protein BRAFLDRAFT_77468 [Branchiostoma floridae]
          Length = 294

 Score =  279 bits (713), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 135/283 (47%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLDL+RH++  G  + DRTG GT S FG Q R+ L   FPLLTTK+V W+ V  ELLW
Sbjct: 12  YQYLDLVRHILDCGQRKDDRTGTGTLSVFGAQCRYSLRGQFPLLTTKRVFWRGVAEELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101
           F+RG +N   L    V IWD    +D            G+LGP+YG QWR         +
Sbjct: 72  FVRGCTNGKELSDKKVHIWDANGSRDFLDKRGLSHYEEGDLGPVYGFQWRHFGAEYKDRY 131

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++ +++ DP +RR I+SAWN   + KMALPPCH   QFYV NG+LSC
Sbjct: 132 TDYTGQGVDQLAQVIHTIKTDPDNRRIIMSAWNPPDLPKMALPPCHAFVQFYVCNGELSC 191

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD  LG+PFNIASYSLLT M+A + G + G+F+HTLGD H+Y NH +    QL 
Sbjct: 192 QLYQRSGDTGLGVPFNIASYSLLTYMIAHITGLKPGDFVHTLGDAHVYVNHVDALKEQLK 251

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P + I   + ++  F+ EDF +  Y+PH  I  +++V
Sbjct: 252 REPRPFPTLNIKRQVENIDDFKMEDFEIVGYKPHPKISMEMAV 294


>gi|326501368|dbj|BAJ98915.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 516

 Score =  279 bits (713), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 132/283 (46%), Positives = 182/283 (64%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +++ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ V+ ELLW
Sbjct: 234 YQYLNLVQDILRTGARKNDRTGTGTISKFGCQMRFNLRKNFPLLTTKRVFWRGVLEELLW 293

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+ G +N   L    + IWD     E+ D       ++G+LGP+YG QWR +        
Sbjct: 294 FISGSTNAKVLQEKNIRIWDGNASREYLDSIGLSQREEGDLGPVYGFQWRHFGAEYSDMH 353

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ++ ++  ++ +P  RR I+SAWN   + KMALPPCH   QFYV+NG+LSC
Sbjct: 354 ADYTGKGFDQLADVINKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 413

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     GEF+H +GD H+Y+ H +  + QL 
Sbjct: 414 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGEFVHVIGDAHVYSTHVQALEEQLQ 473

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP   D+ SF   DF L  Y+PH  I  K++V
Sbjct: 474 KQPKPFPILKINPLKKDIDSFVASDFKLACYDPHQKIEMKMAV 516


>gi|309807223|ref|ZP_07701195.1| thymidylate synthase [Lactobacillus iners LactinV 03V1-b]
 gi|312875520|ref|ZP_07735523.1| thymidylate synthase [Lactobacillus iners LEAF 2053A-b]
 gi|315653456|ref|ZP_07906377.1| thymidylate synthase [Lactobacillus iners ATCC 55195]
 gi|325911481|ref|ZP_08173892.1| thymidylate synthase [Lactobacillus iners UPII 143-D]
 gi|325912868|ref|ZP_08175246.1| thymidylate synthase [Lactobacillus iners UPII 60-B]
 gi|329921037|ref|ZP_08277562.1| thymidylate synthase [Lactobacillus iners SPIN 1401G]
 gi|308166361|gb|EFO68568.1| thymidylate synthase [Lactobacillus iners LactinV 03V1-b]
 gi|311089031|gb|EFQ47472.1| thymidylate synthase [Lactobacillus iners LEAF 2053A-b]
 gi|315489147|gb|EFU78788.1| thymidylate synthase [Lactobacillus iners ATCC 55195]
 gi|325476681|gb|EGC79836.1| thymidylate synthase [Lactobacillus iners UPII 143-D]
 gi|325477861|gb|EGC80995.1| thymidylate synthase [Lactobacillus iners UPII 60-B]
 gi|328935107|gb|EGG31592.1| thymidylate synthase [Lactobacillus iners SPIN 1401G]
          Length = 318

 Score =  279 bits (713), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 185/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V +  +  ELLWFL
Sbjct: 8   YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMKIF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W    G+ IDQ+ ++++ ++ +P SRR IVSAW
Sbjct: 128 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF+Q + QLSR+    P + +NP    +L F  +D  L  Y 
Sbjct: 248 LELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLIDYN 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|302191399|ref|ZP_07267653.1| thymidylate synthase [Lactobacillus iners AB-1]
 gi|309805343|ref|ZP_07699393.1| thymidylate synthase [Lactobacillus iners LactinV 09V1-c]
 gi|309807682|ref|ZP_07701621.1| thymidylate synthase [Lactobacillus iners LactinV 01V1-a]
 gi|312873927|ref|ZP_07733963.1| thymidylate synthase [Lactobacillus iners LEAF 2052A-d]
 gi|308165343|gb|EFO67576.1| thymidylate synthase [Lactobacillus iners LactinV 09V1-c]
 gi|308169056|gb|EFO71135.1| thymidylate synthase [Lactobacillus iners LactinV 01V1-a]
 gi|311090476|gb|EFQ48884.1| thymidylate synthase [Lactobacillus iners LEAF 2052A-d]
          Length = 318

 Score =  279 bits (713), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 185/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V +  +  ELLWFL
Sbjct: 8   YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMNIF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W    G+ IDQ+ ++++ ++ +P SRR IVSAW
Sbjct: 128 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 188 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF+Q + QLSR+    P + +NP    +L F  +D  L  Y 
Sbjct: 248 LELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLIDYN 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|329667138|gb|AEB93086.1| thymidylate synthase [Lactobacillus johnsonii DPC 6026]
          Length = 318

 Score =  279 bits (713), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 180/311 (57%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ +  +  ELLWFL
Sbjct: 8   YLDLLSKIMNEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L  H   IWDEWA                                       
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVESSEYQGPDMTNFGLRSQEDPEFKKIYQEEMEKF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVSAW
Sbjct: 128 DQKVLADQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL  ++A   G
Sbjct: 188 NPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y NHF Q    L+RS    P + +NP+   +  F  +D  L +Y 
Sbjct: 248 LKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLINYR 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|241854848|ref|XP_002415983.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
 gi|215510197|gb|EEC19650.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
          Length = 287

 Score =  279 bits (713), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 136/284 (47%), Positives = 179/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL  L+H+++ G  + DRTGVGT   FG Q R+ L  G  PLLTTK+V W+ VV ELL
Sbjct: 4   YQYLKTLKHILENGKKKEDRTGVGTMLIFGVQCRYSLRNGTMPLLTTKRVFWRGVVEELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR--------S 100
           WFLRG ++   L   G+ IWD+   +            +G+LGP+YG QWR        S
Sbjct: 64  WFLRGSTDAKELSERGIHIWDQNGSRRFLDSLGFFDREEGDLGPVYGFQWRHFGATYRNS 123

Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    +DQI+ +V+ ++ DP  RR I+ +WN   I KM LPPCHCL QFYVD+ +LS
Sbjct: 124 HTDYGNEGVDQITRLVEIIKNDPNDRRMILCSWNPTDIKKMVLPPCHCLAQFYVDDDELS 183

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V G + GEF+H LGD H+Y NH E    QL
Sbjct: 184 CQLYQRSADMGLGVPFNIASYALLTHMMAKVTGKRPGEFVHNLGDAHIYLNHVESVKQQL 243

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I  ++ D+  FR +DF L  Y P+  I  ++SV
Sbjct: 244 EREPRPFPKLRIRRDVTDIFDFRCDDFELIDYNPYPKIKMEMSV 287


>gi|126640531|ref|YP_001083515.1| thymidylate synthase [Acinetobacter baumannii ATCC 17978]
          Length = 247

 Score =  279 bits (713), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 136/247 (55%), Positives = 173/247 (70%), Gaps = 16/247 (6%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDG----- 88
           MRFDLSKGFPLLTTKKVH++S+V ELLWFL+GD+NV YL  + V+IWDEWA  +      
Sbjct: 1   MRFDLSKGFPLLTTKKVHFRSIVIELLWFLKGDTNVKYLQDNKVTIWDEWATAEQTARFG 60

Query: 89  ----ELGPIYGVQWRSWP-------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
               ELGP+YG QWR++         Y+ +  DQI  ++  ++ +P SRR IVS WN   
Sbjct: 61  RPEHELGPVYGHQWRNFGATKNADGTYNQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNE 120

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             ++ALPPCH LFQF+V + KLSCQLYQRS DVFLG+PFNIASY+LLT M+A V G   G
Sbjct: 121 AGQVALPPCHTLFQFFVQDNKLSCQLYQRSADVFLGVPFNIASYALLTHMIAQVCGLDVG 180

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           +F+ T GD HLY NHFEQA LQL+R P  L Q+ +NP++ D+  F++ED  +  YE H A
Sbjct: 181 DFVWTGGDTHLYANHFEQAKLQLTREPLPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPA 240

Query: 258 ILAKVSV 264
           I A V+V
Sbjct: 241 IKAPVAV 247


>gi|6729892|pdb|1BP6|A Chain A, Thymidylate Synthase R23i, R179t Double Mutant
          Length = 316

 Score =  278 bits (712), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G  + D T  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKKVLDEGHFKPDITHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  HGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMAKF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR  IVSAW
Sbjct: 126 DDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRTLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +Y+
Sbjct: 246 LEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYD 305

Query: 254 PHAAILAKVSV 264
           P+ AI A V+V
Sbjct: 306 PYPAIKAPVAV 316


>gi|259500709|ref|ZP_05743611.1| thymidylate synthase [Lactobacillus iners DSM 13335]
 gi|259168093|gb|EEW52588.1| thymidylate synthase [Lactobacillus iners DSM 13335]
          Length = 329

 Score =  278 bits (712), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 185/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V +  +  ELLWFL
Sbjct: 19  YLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLWFL 78

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 79  RGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMNIF 138

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W    G+ IDQ+ ++++ ++ +P SRR IVSAW
Sbjct: 139 TEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVSAW 198

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A   G
Sbjct: 199 NPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARETG 258

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NHF+Q + QLSR+    P + +NP    +L F  +D  L  Y 
Sbjct: 259 LELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLIDYN 318

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 319 HHGTIKAPVAV 329


>gi|291394174|ref|XP_002713484.1| PREDICTED: thymidylate synthase [Oryctolagus cuniculus]
          Length = 310

 Score =  278 bits (711), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 134/282 (47%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 29  QYLGQIEHILRCGFRKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 88

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD  A +D            G+LGP+YG QWR +         
Sbjct: 89  IKGSTNAKELSSKGVKIWDANASRDFLDSLGFSTRQEGDLGPVYGFQWRHFGAEYKDKDS 148

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 149 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 208

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E    QL R
Sbjct: 209 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHIYLNHIEPLKTQLQR 268

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF L  Y PH  I  +++V
Sbjct: 269 EPRPFPKLKILRKVETIDDFKAEDFQLEGYNPHPTIKMEMAV 310


>gi|163740938|ref|ZP_02148331.1| thymidylate synthase [Phaeobacter gallaeciensis 2.10]
 gi|161385929|gb|EDQ10305.1| thymidylate synthase [Phaeobacter gallaeciensis 2.10]
          Length = 246

 Score =  278 bits (711), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 129/245 (52%), Positives = 174/245 (71%), Gaps = 13/245 (5%)

Query: 33  QMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGP 92
           Q R+ L+ GFPL+TTKK+H +S++HELLWFL GD+N+ YL  +GVSIWDEWAD++G+LGP
Sbjct: 2   QTRYPLADGFPLVTTKKLHLRSIIHELLWFLSGDTNIGYLKDNGVSIWDEWADENGDLGP 61

Query: 93  IYGVQWRSWPD-------------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           +YG QWR +P              Y    +DQI+++V+ +R  P SRR IV+AWN A + 
Sbjct: 62  VYGHQWRHFPRLELAPGTSGDEPLYRAGTVDQITNLVEMIRNSPDSRRLIVTAWNPADVP 121

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
            MALPPCH L+Q  V   ++  QLYQRS D+FLG+PFNIASY+LL  MLA V G++ G+F
Sbjct: 122 DMALPPCHTLWQVRVQGRRMHLQLYQRSADMFLGVPFNIASYALLLKMLAHVTGYEAGDF 181

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           IHT+GD H+Y+NH +Q  LQLSR P+ LP++ IN ++  +  FRYEDF + +Y P   I 
Sbjct: 182 IHTIGDAHIYSNHMDQVKLQLSRRPQPLPELRINRDVSSIFEFRYEDFDVLNYTPDPGIK 241

Query: 260 AKVSV 264
           A V+V
Sbjct: 242 APVAV 246


>gi|163839708|ref|YP_001624113.1| thymidylate synthase [Renibacterium salmoninarum ATCC 33209]
 gi|162953184|gb|ABY22699.1| thymidylate synthase [Renibacterium salmoninarum ATCC 33209]
          Length = 208

 Score =  278 bits (710), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 126/207 (60%), Positives = 159/207 (76%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           ELLWFLRGDSNV +L  +GV IW+EWAD DGELGP+YGVQWRSWP  DG  IDQI+S+++
Sbjct: 2   ELLWFLRGDSNVHWLQENGVKIWNEWADDDGELGPVYGVQWRSWPTPDGQHIDQIASLIE 61

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
           +L+A+P SRRHIVSAWNVA + KMALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFN
Sbjct: 62  ALKANPDSRRHIVSAWNVAELSKMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFN 121

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           IASY+LL +M+A  +G + GEFI T GD H+Y++H  Q + QLSR P   P + IN    
Sbjct: 122 IASYALLALMVAQQVGLEPGEFIWTGGDTHIYDDHLAQVEEQLSREPFPYPSLRINRKPT 181

Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +  + +EDF + +Y+ HA I A ++V
Sbjct: 182 SIFDYNFEDFEVLNYQHHATIKAPIAV 208


>gi|302848723|ref|XP_002955893.1| hypothetical protein VOLCADRAFT_66296 [Volvox carteri f.
           nagariensis]
 gi|300258861|gb|EFJ43094.1| hypothetical protein VOLCADRAFT_66296 [Volvox carteri f.
           nagariensis]
          Length = 483

 Score =  278 bits (710), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 135/282 (47%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L+R +I  G+ R DRTG GT S FG   R++L   FPLLT+K+V WK V  ELLWF
Sbjct: 202 QYLELVRELITSGTFRPDRTGTGTYSRFGRTARYNLRHTFPLLTSKRVFWKGVAEELLWF 261

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           +RG +N + L    + IWD  + ++            G+LGP+YG QWR +         
Sbjct: 262 IRGSTNANLLRDKNIHIWDGNSTREYLDSRGLHHREVGDLGPVYGFQWRHFGAAYKDMHT 321

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+ +I++ +R DP  RR I+SAWN A +++MALPPCH   QFYV +G+LSC 
Sbjct: 322 DYTGQGVDQLKAIIEQIRKDPNDRRMIMSAWNPAALNEMALPPCHMFCQFYVADGELSCL 381

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS DV LG+PFNIASY+LLT ++A V G + G+FIH +GD H+Y NH E    QL  
Sbjct: 382 MYQRSCDVGLGVPFNIASYALLTRLVAQVTGLRAGDFIHVMGDTHVYANHVEPLKEQLKN 441

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P + INP   D+ SF +EDF L  Y+PH  I  K++V
Sbjct: 442 TPRHFPILNINPAKTDIDSFVFEDFELVDYQPHQTIKMKMAV 483


>gi|148705312|gb|EDL37259.1| thymidylate synthase, isoform CRA_a [Mus musculus]
          Length = 318

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 37  QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 96

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 97  IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 156

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 157 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 216

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 217 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 276

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 277 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 318


>gi|227890206|ref|ZP_04008011.1| thymidylate synthase [Lactobacillus johnsonii ATCC 33200]
 gi|227849208|gb|EEJ59294.1| thymidylate synthase [Lactobacillus johnsonii ATCC 33200]
          Length = 318

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 180/311 (57%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ +  +  ELLWFL
Sbjct: 8   YLDLLSKIMNEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L  H   IWDEWA                                       
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVESSEYQGPDMTNFGLRSQEDPEFKRIYQEEMQKF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVSAW
Sbjct: 128 DQKVLEDQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL  +++   G
Sbjct: 188 NPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLISRETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y NHF Q    L+RS    P + +NP+   +  F  +D  L +Y 
Sbjct: 248 LKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLINYR 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|18044897|gb|AAH20139.1| Tyms protein [Mus musculus]
          Length = 307

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 26  QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 86  IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 266 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307


>gi|46358062|ref|NP_067263.1| thymidylate synthase [Mus musculus]
 gi|136614|sp|P07607|TYSY_MOUSE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|285803264|pdb|3IHH|A Chain A, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803265|pdb|3IHH|B Chain B, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803266|pdb|3IHH|C Chain C, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803267|pdb|3IHH|D Chain D, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803268|pdb|3IHH|E Chain E, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803269|pdb|3IHH|F Chain F, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803270|pdb|3IHI|A Chain A, Crystal Structure Of Mouse Thymidylate Synthase
 gi|285803271|pdb|3IHI|B Chain B, Crystal Structure Of Mouse Thymidylate Synthase
 gi|202030|gb|AAA40439.1| thymidylate synthase (EC 2.1.1.45) [Mus musculus]
 gi|202050|gb|AAA40444.1| thymidylate synthase [Mus musculus]
 gi|26330828|dbj|BAC29144.1| unnamed protein product [Mus musculus]
 gi|148705313|gb|EDL37260.1| thymidylate synthase, isoform CRA_b [Mus musculus]
          Length = 307

 Score =  277 bits (708), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 26  QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 86  IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 266 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307


>gi|9507217|ref|NP_062052.1| thymidylate synthase [Rattus norvegicus]
 gi|1174841|sp|P45352|TYSY_RAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|4558189|pdb|1RTS|A Chain A, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|4558190|pdb|1RTS|B Chain B, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|4558226|pdb|2TSR|A Chain A, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|4558227|pdb|2TSR|B Chain B, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|4558228|pdb|2TSR|C Chain C, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|4558229|pdb|2TSR|D Chain D, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|207328|gb|AAA92340.1| thymidylate synthase [Rattus norvegicus]
 gi|117558487|gb|AAI26094.1| Thymidylate synthetase [Rattus norvegicus]
 gi|149036310|gb|EDL90969.1| thymidylate synthase [Rattus norvegicus]
 gi|1095492|prf||2109225A thymidylate synthase
          Length = 307

 Score =  277 bits (708), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 26  QYLRQVEHIMRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 86  IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGADYKDMDS 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 266 EPRPFPKLRILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307


>gi|194758475|ref|XP_001961487.1| GF14907 [Drosophila ananassae]
 gi|190615184|gb|EDV30708.1| GF14907 [Drosophila ananassae]
          Length = 340

 Score =  276 bits (707), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 139/284 (48%), Positives = 181/284 (63%), Gaps = 22/284 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LLR +I  G  R DRT VGT S FG QMRF L   FPLLTTK+V +++V  ELLWF
Sbjct: 57  QYLNLLRSIINTGERRMDRTEVGTLSIFGSQMRFSLRGCFPLLTTKRVFFRAVAEELLWF 116

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------P 102
           + G ++   L    V IWD     E+ DK        G+LGP+YG QWR +         
Sbjct: 117 VAGKTDAKLLQAKNVHIWDGNSTREFLDKLGHTDRAVGDLGPVYGFQWRHFGAEYTTCDD 176

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGKLS 160
           DY G  IDQ+  ++ +++ +P  RR I+SAWN   I KMALPPCHCL QFYV  + G+LS
Sbjct: 177 DYRGKGIDQLKHVIDTIKKNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQERGELS 236

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    QL
Sbjct: 237 CQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLQEQL 296

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P+++I   + D+  FRYEDF +  Y P+  I   +++
Sbjct: 297 EREPRPFPKLVIKRQVQDIEDFRYEDFEIVDYNPYPKIKMDMAI 340


>gi|195454454|ref|XP_002074244.1| GK18389 [Drosophila willistoni]
 gi|194170329|gb|EDW85230.1| GK18389 [Drosophila willistoni]
          Length = 340

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 133/285 (46%), Positives = 183/285 (64%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDLLR +I+ G  R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V  ELLW
Sbjct: 56  EQYLDLLRSIIERGETRIDRTRVGTLSIFGSQMRFDMRESFPLLTTKRVFFRAVAEELLW 115

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F++G ++   L    V IWD  + ++            G+LGP+YG QWR +        
Sbjct: 116 FIKGKTDAKILQDKNVHIWDGNSTREFLDNLGFTDRAVGDLGPVYGFQWRHFGAEYRTCQ 175

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159
            DY G  +DQ+  ++++++ +P  RR I+SAWN   I KMALPPCHCL QFYV    G+L
Sbjct: 176 DDYTGQGVDQLRQVIETIKTNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQSRGEL 235

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y +H E    Q
Sbjct: 236 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLSHVEPIKEQ 295

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R+PR  P++     + D+  F YED  + +Y P+  I  +++V
Sbjct: 296 LKRTPRPFPKLAFKRQVTDIEDFTYEDIEVVNYNPYPKIQMEMAV 340


>gi|195031079|ref|XP_001988286.1| GH10649 [Drosophila grimshawi]
 gi|193904286|gb|EDW03153.1| GH10649 [Drosophila grimshawi]
          Length = 329

 Score =  276 bits (706), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 138/285 (48%), Positives = 180/285 (63%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDLL+ +IK G  R DRT VGT S FG QMRFDL   FPLLTTK+V ++ V  ELLW
Sbjct: 45  QQYLDLLKRIIKTGDQRIDRTAVGTLSIFGTQMRFDLRDSFPLLTTKRVFFRGVAEELLW 104

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ G +N   L    V IWD     E+ DK       +G+LGP+YG QWR +        
Sbjct: 105 FVAGKTNAKLLQAKKVHIWDFNSTREFLDKCGHTDRDEGDLGPVYGFQWRHFGAEYRGCD 164

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159
            DY G  +DQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QF+V    G+L
Sbjct: 165 DDYTGQGVDQLQQVIDTIRNNPADRRIIMSAWNPLDIPKMALPPCHCLVQFFVSQSRGEL 224

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQ+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    Q
Sbjct: 225 SCQMYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLQEQ 284

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + R PR  P++ I   +  +  F Y+DF +  Y P+  I  K++V
Sbjct: 285 MKRVPRPFPKLRIKRQVEKIEDFCYDDFEVVDYNPYEKIQMKMAV 329


>gi|221110571|ref|XP_002155565.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 329

 Score =  276 bits (706), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 139/283 (49%), Positives = 184/283 (65%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +I+ G  + DRTG GT S FG QMRF+L + FPLLTTK+V WK VV ELLW
Sbjct: 47  YQYLNLVKRIIETGYSKADRTGTGTLSIFGGQMRFNLRESFPLLTTKRVFWKGVVEELLW 106

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADKD-------GELGPIYGVQWRSW-------- 101
           F+ G ++ + L + GV IW+     E+ DK        G+LGPIYG QWR +        
Sbjct: 107 FISGSTDGNILAQKGVQIWNSNGTREFLDKCNLHHREVGDLGPIYGFQWRHFGAKYVDKH 166

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  IDQ++ I+ +++ +P  RR I+SAWN   I  MALPPCH   QFYV NG+LSC
Sbjct: 167 ADYTGQGIDQLAQIIHTIKTNPDDRRMIMSAWNPVDIPLMALPPCHSFCQFYVANGELSC 226

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LGIPFNIASYSLLT ++A V   + G+FIHTLGD H+YNNH      Q+ 
Sbjct: 227 QMYQRSCDMGLGIPFNIASYSLLTYIIAHVCNLKPGDFIHTLGDAHVYNNHVSALKEQIG 286

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           RSPR  P++ I   + ++  F+ +DF L  Y PH  I   ++V
Sbjct: 287 RSPRPFPKLNIKRKVENIDDFKSDDFELIGYNPHQKIKMAMAV 329


>gi|42519343|ref|NP_965273.1| thymidylate synthase [Lactobacillus johnsonii NCC 533]
 gi|62901341|sp|Q74IU3|TYSY_LACJO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|41583631|gb|AAS09239.1| thymidylate synthase [Lactobacillus johnsonii NCC 533]
          Length = 318

 Score =  276 bits (706), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 179/311 (57%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ +  +  ELLWFL
Sbjct: 8   YLDLLSKIMSEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L  H   IWDEWA                                       
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVESNEYQGPDMTNFGLRSQQDPEFKRIYQEEMKKF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVSAW
Sbjct: 128 DQKVLEDQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV++G LS QLYQRSGD+FLG+PFNIASY+LL  ++A   G
Sbjct: 188 NPEDVPTSALPPCHVLFQFYVNDGCLSLQLYQRSGDMFLGVPFNIASYALLVNLVARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y NHF Q    L+RS    P + +NP+   +  F  +D  L +Y 
Sbjct: 248 LKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLINYR 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|208969084|dbj|BAG74311.1| dihydrofolate reductase-thymidylate synthase [Babesia gibsoni]
          Length = 515

 Score =  276 bits (706), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 134/282 (47%), Positives = 183/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+L  V+  G+ +++RTG    S FGYQMRFDLSK FPLLTTKKV  +S++ ELLWF
Sbjct: 229 QYLDILADVLSNGTLKQNRTGTDAYSKFGYQMRFDLSKSFPLLTTKKVALRSIIEELLWF 288

Query: 63  LRGDSNVSYLHRHGVSIWD-----------EWADKDG-ELGPIYGVQWRSW--------P 102
           +RG +N + L    V IW+            + D++  +LGP+YG QWR +         
Sbjct: 289 IRGSTNGNDLLAKNVRIWELNGARSFLDNLGFTDREEHDLGPVYGFQWRHFGAKYLDMHA 348

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  IDQ+ ++++ ++ +P  RR IV +WNVA + KMALPPCHC FQFYV +GKLSC 
Sbjct: 349 DYSGQGIDQLKTVIEKIKTNPNDRRLIVCSWNVADLGKMALPPCHCFFQFYVKDGKLSCL 408

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYS+LT M+A V G Q GEF+H L D H+Y +H E   LQ+SR
Sbjct: 409 MHQRSCDLGLGVPFNIASYSILTAMIAQVCGLQLGEFVHNLADAHVYVDHVEPVKLQMSR 468

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P   PQ+ +NP++ D+  F  +D  + +Y  H  I   +S 
Sbjct: 469 VPYPFPQLKLNPDVKDIEGFTIDDIQVVNYVSHPPIKMAMSA 510


>gi|268319281|ref|YP_003292937.1| hypothetical protein FI9785_796 [Lactobacillus johnsonii FI9785]
 gi|262397656|emb|CAX66670.1| thyA [Lactobacillus johnsonii FI9785]
          Length = 318

 Score =  276 bits (706), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 179/311 (57%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  ++  G D+ DRTG GTRS FG QMRFDL+ GFP+LTTK++ +  +  ELLWFL
Sbjct: 8   YLDLLSKIMNEGHDKEDRTGTGTRSLFGVQMRFDLNDGFPILTTKEIPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L  H   IWDEWA                                       
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVESSDYQGPDMTNFGLRSQEDPEFKKIYQEEMKKF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G LG +YG QWR W    G  IDQI +++  ++  PYSRR IVSAW
Sbjct: 128 DEKVLADQTFAEKYGNLGDVYGAQWRHWQKRGGGFIDQIQNVIDQIKTTPYSRRLIVSAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL  ++A   G
Sbjct: 188 NPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLIACETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y NHF Q    L+RS    P + +NP+   +  F  +D  L +Y 
Sbjct: 248 LKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLINYR 307

Query: 254 PHAAILAKVSV 264
            H  I A V+V
Sbjct: 308 HHGTIKAPVAV 318


>gi|16117371|gb|AAL14421.1|AF188480_3 thymidylate synthase [Macropodid herpesvirus 1]
          Length = 316

 Score =  276 bits (705), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 137/282 (48%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  +  +++ G  + DRTG GT S FG Q R++L   FPLLTTK+V+WK VV ELLWF
Sbjct: 35  QYLYQVARILREGYRKGDRTGTGTLSVFGTQARYNLRGEFPLLTTKRVYWKGVVEELLWF 94

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SWP 102
           +RG +N   L   GV IWD    +D            G+LGP+YG QWR        S  
Sbjct: 95  VRGATNTKELSSRGVKIWDAHGSRDFLDKRGFPSREEGDLGPVYGFQWRHFGAEYRGSEA 154

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G   DQ+  ++ +L+ +P  RR ++ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 155 DYSGQGADQLQYVIDTLKRNPDDRRIVMCAWNPKDLPLMALPPCHTLCQFYVANGELSCQ 214

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V+G   GE +HTLGD H+Y NH E+  +QL R
Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHVVGLVPGELVHTLGDAHIYLNHIERLRIQLQR 274

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  PQ+ I   +  +  FR EDF L  Y PH+A+  +++V
Sbjct: 275 EPRPFPQLKIIRAVTSIDYFRSEDFVLEGYRPHSALKMELAV 316


>gi|222617018|gb|EEE53150.1| hypothetical protein OsJ_35972 [Oryza sativa Japonica Group]
          Length = 521

 Score =  275 bits (704), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L + FPLLTTK+V W+ V+ ELLW
Sbjct: 239 YQYLNLVQDIIRNGAKKNDRTGTGTVSKFGCQMRFNLRRNFPLLTTKRVFWRGVLEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101
           F+ G +N   L   G+ IWD  A +            +G+LGP+YG QWR +        
Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASRQYLDSIGLTQREEGDLGPVYGFQWRHFGAEYTDMH 358

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN   + KMALPPCH   QFYV+NG+LSC
Sbjct: 359 ADYVGKGFDQLMDVIDKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     G+F+H +GD H+Y  H E  + Q+ 
Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGDFVHVIGDAHVYRTHVEALEEQMR 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP   D+ SF   DF L  Y+PH  I  K++V
Sbjct: 479 KQPKPFPILKINPVKKDIDSFVTSDFKLVRYDPHHKIEMKMAV 521


>gi|163737393|ref|ZP_02144810.1| Thymidylate synthase [Phaeobacter gallaeciensis BS107]
 gi|161388919|gb|EDQ13271.1| Thymidylate synthase [Phaeobacter gallaeciensis BS107]
          Length = 246

 Score =  275 bits (704), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 128/245 (52%), Positives = 172/245 (70%), Gaps = 13/245 (5%)

Query: 33  QMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGP 92
           Q R+ L+ GFPL+TTKK+H +S++HELLWFL GD+N+ YL  +GVSIWDEWAD++G+LGP
Sbjct: 2   QTRYPLADGFPLVTTKKLHLRSIIHELLWFLSGDTNIGYLKDNGVSIWDEWADENGDLGP 61

Query: 93  IYGVQWRSWPD-------------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           +YG QWR +P              Y    +DQI+++V  +R  P SRR IV+AWN   + 
Sbjct: 62  VYGHQWRHFPRLELAEGTTGEEPLYRAGTVDQIANLVDMIRNSPDSRRLIVTAWNPGDVP 121

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
            MALPPCH L+Q  V   ++  QLYQRS D+FLG+PFNIASY+LL  MLA V G++ G+F
Sbjct: 122 DMALPPCHTLWQVRVQGRRMHLQLYQRSADMFLGVPFNIASYALLLKMLAHVTGYEAGDF 181

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           IHT+GD H+Y+NH +Q  LQLSR P+ LP++ IN ++  +  FRYEDF + +Y P   I 
Sbjct: 182 IHTIGDAHIYSNHMDQVKLQLSRRPQPLPELRINRDVSSIFEFRYEDFDVLNYTPDPGIK 241

Query: 260 AKVSV 264
           A V+V
Sbjct: 242 APVAV 246


>gi|307108201|gb|EFN56442.1| hypothetical protein CHLNCDRAFT_30873 [Chlorella variabilis]
          Length = 508

 Score =  275 bits (704), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 134/283 (47%), Positives = 180/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL+++  V+  G  R DRTG GT S FG  MRF+L   FPLLTTK+V W+ V  ELLW
Sbjct: 226 HQYLEMIEDVMANGVFRGDRTGTGTYSKFGATMRFNLRHSFPLLTTKRVFWRGVAEELLW 285

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101
           F+ G +N   L   G+ IWD     E+ D  G       +LGP+YG QWR +        
Sbjct: 286 FVSGCTNARVLMDKGIHIWDGNGSREYLDSIGLSHREEMDLGPVYGFQWRHFGAEYTDMH 345

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++ +P  RR ++SAWN A +  MALPPCH   QFYV +G+LSC
Sbjct: 346 ADYGGKGVDQLAELIHKIKTNPNDRRLVLSAWNPAALTDMALPPCHMFCQFYVADGELSC 405

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H LGD H+Y NH      QL 
Sbjct: 406 QMYQRSCDLGLGVPFNIASYSLLTCMVAQVCGLRPGDFVHVLGDAHVYANHVGPLRDQLK 465

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +PR  P+++INP   D+ SF ++DF L  Y+PH AI  +++V
Sbjct: 466 NAPRHFPRLLINPAKTDIDSFVFDDFQLEGYQPHKAIKMQMAV 508


>gi|66556831|ref|XP_624369.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase [Apis mellifera]
          Length = 305

 Score =  275 bits (704), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 140/284 (49%), Positives = 179/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+L+  +IK G+ + DRTGVGT S FG QMRF+L    FPLLTTK+V WK VV ELL
Sbjct: 22  YQYLNLIEKIIKDGTRKDDRTGVGTLSIFGTQMRFNLRNNIFPLLTTKRVFWKGVVEELL 81

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRS-------- 100
           WF++G +N   L    V IWD     E+ D       ++G+LGPIYG QWR         
Sbjct: 82  WFIKGSTNAKKLSEKDVHIWDANSSREFLDSCGFIDREEGDLGPIYGFQWRHFGATYKDM 141

Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
           + DY+G  IDQ+  ++  +R  P  RR I++AWN   I KMALPPCHC  QFYV N +LS
Sbjct: 142 YKDYNGEGIDQLKEVIDKIRYSPNDRRIIMTAWNPIDIPKMALPPCHCFVQFYVSNEELS 201

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASYSLL  +LA +   + GEFIHT+GD H+Y NH      Q+
Sbjct: 202 CQLYQRSADMGLGVPFNIASYSLLIYILAHITNLKPGEFIHTMGDCHVYLNHISALKEQI 261

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P+  P + I  N+ D+  F   DF L  Y+PHA I   ++V
Sbjct: 262 KRVPKPFPYLKIIRNVEDINDFTANDFELIGYDPHAKISMPMAV 305


>gi|295798079|emb|CAX68899.1| Thymidylate synthase [uncultured bacterium]
          Length = 271

 Score =  275 bits (703), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 133/262 (50%), Positives = 173/262 (66%), Gaps = 11/262 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G  + DRTG GT S FGYQ ++DL +GFP+LTTKKV + +VV ELL
Sbjct: 1   MKQYLDLVRDILTHGEKKEDRTGTGTISLFGYQSKYDLRQGFPILTTKKVLFDAVVWELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD---------YDGNVIDQ 111
           WFLRG +N++   +    IW+ WAD  GELGP+YG QWR W           Y    IDQ
Sbjct: 61  WFLRGSTNINDDLKAHTPIWNAWADAQGELGPVYGYQWRKWEKFVWDEKARAYQKKHIDQ 120

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           I+ ++++++ +P SRR IVSAWNV+ ID+MALPPCH  FQFYV NG+L CQLYQRS DV 
Sbjct: 121 ITEVIETIKKNPNSRRLIVSAWNVSDIDRMALPPCHAFFQFYVVNGRLDCQLYQRSADVA 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LL  ++A       G F HTLGD H+Y NH +    QL R+P+  P  +
Sbjct: 181 LGVPFNIASYALLMSLVAKECSLTPGIFTHTLGDAHIYLNHIDGIKQQLERAPK--PLAL 238

Query: 232 INPNIVDLLSFRYEDFTLRSYE 253
           +      +L  R+ED  L  Y+
Sbjct: 239 LQLACKRVLECRFEDIKLIGYQ 260


>gi|241106587|ref|XP_002410061.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
 gi|215492873|gb|EEC02514.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
          Length = 301

 Score =  275 bits (703), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 137/284 (48%), Positives = 182/284 (64%), Gaps = 25/284 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLD L H++K G  + DRTG GT S FG Q R+ L+ G  PLLTTK+V W+ VV ELL
Sbjct: 22  YQYLDTLAHILKNGRQKGDRTGTGTISIFGAQCRYSLADGTMPLLTTKRVFWRGVVEELL 81

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG +N   L   GV IWD    +            +G+LGP+YG QWR +       
Sbjct: 82  WFLRGSTNAKELSERGVRIWDGNGSRQFLDSLGFVDREEGDLGPVYGFQWRHFGAPYRTM 141

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    +DQI +++++++ +P  RR I+ +WN A + KMALPPCHCL QFYV   +LS
Sbjct: 142 RTDYGDEGVDQIKNLIETIKTNPNDRRMILCSWNPADLGKMALPPCHCLAQFYVYEDELS 201

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH +     L
Sbjct: 202 CQLYQRSADMGLGVPFNIASYALLTHMVAKVTGKRPGDFVHTLGDAHIYLNHVD----AL 257

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I  ++ D+  FR+EDF +  Y PH AI  ++SV
Sbjct: 258 EREPRPFPKLHIKRDVKDIFDFRFEDFEIVDYHPHPAIKMEMSV 301


>gi|322788931|gb|EFZ14449.1| hypothetical protein SINV_05432 [Solenopsis invicta]
          Length = 302

 Score =  275 bits (703), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 139/284 (48%), Positives = 180/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L+  VIK G+ R +RTGV T S FG QMRF L  G FPLLTTK+V W++VV ELL
Sbjct: 19  YQYLRLIEKVIKTGAKRGNRTGVDTYSIFGAQMRFSLRDGVFPLLTTKRVFWRAVVEELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WF++G +N   L   G+ IWDE   +            +G+LGP+YG QWR +       
Sbjct: 79  WFIKGSTNSKELTDKGIHIWDENGSRAFLDSYGFTNREEGDLGPVYGFQWRHFGAEYKDM 138

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    IDQ+  ++  ++  P  RR I+SAWN   I KMALPPCH   QFYV+NG+LS
Sbjct: 139 HTDYTRQGIDQLKEVIHKVKHSPEDRRIIMSAWNPVDIPKMALPPCHTFVQFYVNNGELS 198

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH    + Q+
Sbjct: 199 AQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEEQV 258

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I   I D+  F  EDF L  Y+P+A +  K++V
Sbjct: 259 KREPREFPKLKIVREIKDIDDFIAEDFELIDYKPYAKLYMKMAV 302


>gi|325183269|emb|CCA17727.1| bifunctional dihydrofolate reductasethymidylate synthase 2 putative
           [Albugo laibachii Nc14]
 gi|325183915|emb|CCA18373.1| bifunctional dihydrofolate reductasethymidylate synthase 2 putative
           [Albugo laibachii Nc14]
          Length = 494

 Score =  275 bits (703), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 135/286 (47%), Positives = 185/286 (64%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+L+R+++  G +++DRTGVGT+S FG QMRF+L    FPLLTTKKV W+ V  ELL
Sbjct: 209 YQYLNLIRNIVANGVEKQDRTGVGTKSIFGVQMRFNLRNDMFPLLTTKKVFWRGVAEELL 268

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW------- 101
           WF+ G++N   L    V IWD                ++G+LGPIYG QWR +       
Sbjct: 269 WFISGNTNAKTLQDRKVRIWDGNGSSAYLKSIGLHHREEGDLGPIYGFQWRHFGAKYTDM 328

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G   DQ++ ++  L+ DP  RR I+SAWN   +++MALPPCH + QFYV  G+LS
Sbjct: 329 HADYTGQGFDQLADVILKLKTDPNGRRIILSAWNPNDLNEMALPPCHLMCQFYVAKGQLS 388

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFNIASY+LLT M+A V     GEF+H +GD H+Y NH E   LQL
Sbjct: 389 CQMYQRSADMGLGVPFNIASYALLTKMIAHVTYLTPGEFVHVIGDAHIYLNHLEPLKLQL 448

Query: 221 SRSPRTLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+PR  P ++I P  ++  +  F + DF L++YEP+ AI   ++V
Sbjct: 449 ERTPRPFPTLLIRPRNDLRTIDDFEFTDFELQNYEPYMAIKMAMAV 494


>gi|195161930|ref|XP_002021809.1| GL26706 [Drosophila persimilis]
 gi|194103609|gb|EDW25652.1| GL26706 [Drosophila persimilis]
          Length = 330

 Score =  275 bits (703), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 139/285 (48%), Positives = 183/285 (64%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL++++I  G  R DRT VGT S FG Q+RFD+   FPLLTTK+V +++VV EL+W
Sbjct: 46  QQYLDLIQYIIGNGERRIDRTNVGTLSVFGSQLRFDMRLSFPLLTTKRVFFRAVVEELIW 105

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ G ++   L    V IWD     E+ DK        G+LGP+YG QWR +        
Sbjct: 106 FVGGKTDAKLLQAKNVHIWDGNSTREYLDKLGHTDRAVGDLGPVYGFQWRHFGAEYGTCD 165

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159
            DY G  IDQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QFYV    G+L
Sbjct: 166 DDYSGKGIDQLRQVIDTIRHNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGEL 225

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+FIHT+GD H+Y NH +    Q
Sbjct: 226 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKTGDFIHTMGDAHVYLNHVDPLKEQ 285

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R PR  P++ I   + ++  FRYEDF +  YEP+  I   ++V
Sbjct: 286 LKRKPRPFPKLNIKRQVENIEDFRYEDFEIIGYEPYPKIKMDMAV 330


>gi|110808211|sp|Q2QRX6|DRTS_ORYSJ RecName: Full=Putative bifunctional dihydrofolate
           reductase-thymidylate synthase; Short=DHFR-TS; Includes:
           RecName: Full=Dihydrofolate reductase; Includes:
           RecName: Full=Thymidylate synthase
 gi|108862630|gb|ABA98037.2| Bifunctional dihydrofolate reductase-thymidylate synthase,
           putative, expressed [Oryza sativa Japonica Group]
 gi|215769248|dbj|BAH01477.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186783|gb|EEC69210.1| hypothetical protein OsI_38205 [Oryza sativa Indica Group]
          Length = 494

 Score =  275 bits (703), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L + FPLLTTK+V W+ V+ ELLW
Sbjct: 212 YQYLNLVQDIIRNGAKKNDRTGTGTVSKFGCQMRFNLRRNFPLLTTKRVFWRGVLEELLW 271

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101
           F+ G +N   L   G+ IWD  A +            +G+LGP+YG QWR +        
Sbjct: 272 FISGSTNAKVLQEKGIHIWDGNASRQYLDSIGLTQREEGDLGPVYGFQWRHFGAEYTDMH 331

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN   + KMALPPCH   QFYV+NG+LSC
Sbjct: 332 ADYVGKGFDQLMDVIDKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 391

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     G+F+H +GD H+Y  H E  + Q+ 
Sbjct: 392 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGDFVHVIGDAHVYRTHVEALEEQMR 451

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP   D+ SF   DF L  Y+PH  I  K++V
Sbjct: 452 KQPKPFPILKINPVKKDIDSFVTSDFKLVRYDPHHKIEMKMAV 494


>gi|296222340|ref|XP_002757144.1| PREDICTED: thymidylate synthase-like isoform 1 [Callithrix jacchus]
          Length = 313

 Score =  275 bits (702), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYRDMDS 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNGELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFKVEGYNPHPTIKMEMAV 313


>gi|156551994|ref|XP_001603103.1| PREDICTED: similar to Tyms protein [Nasonia vitripennis]
          Length = 316

 Score =  274 bits (701), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 133/277 (48%), Positives = 175/277 (63%), Gaps = 21/277 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYL L+R ++  G+ + DRTGVGT S FG QMRF L  G  PLLTTK+V W++V  EL W
Sbjct: 34  QYLKLIRLILDKGAVKDDRTGVGTHSVFGTQMRFSLRDGTLPLLTTKRVFWRAVAEELFW 93

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG +N   L   GV IWD  A ++            G+LGP+YG QWR +        
Sbjct: 94  FIRGSTNAKELSAKGVKIWDANASREFLDTCGFQDREEGDLGPVYGFQWRHFGAKYVDMH 153

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ++ ++  ++ +P  RR I+SAWN   I KMALPPCH L QFYV +G+LSC
Sbjct: 154 TDYSGQGFDQLADVIDKVKNNPDDRRIIMSAWNPVDIPKMALPPCHSLAQFYVYDGELSC 213

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQR+GD+ LG+PFNIASYSLLT+M+A V   + GEF+HT+GD H+Y NH +    Q+ 
Sbjct: 214 HLYQRAGDMGLGVPFNIASYSLLTIMIAHVANLKPGEFVHTMGDTHVYRNHVDAVKEQIK 273

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R PR  P++ I   + D+  F++ DF L  Y PH  I
Sbjct: 274 REPRPFPKLRIKRQVTDIDDFQFSDFELEGYNPHPKI 310


>gi|118349035|ref|XP_001033394.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Tetrahymena thermophila]
 gi|89287743|gb|EAR85731.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Tetrahymena thermophila SB210]
          Length = 485

 Score =  274 bits (701), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 138/285 (48%), Positives = 182/285 (63%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L+  +IK G  + DRTG GT S FG  MRFDLSK FPLLTTK V W+ VV EL+W
Sbjct: 201 YQYLELIDEIIKNGHVKTDRTGTGTISQFGKLMRFDLSKSFPLLTTKNVFWRGVVEELIW 260

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F++G +N   L   GV IWD     E+ D+       +G+LGP+YG QWR +        
Sbjct: 261 FIKGSTNSKILSEKGVKIWDGNGSREFLDQLGFKNREEGDLGPVYGFQWRHFGAEYKDMH 320

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y G  +DQ+  ++ +++ +P SRR I++AWNV  +  MALPPCH + QFYV++ KLSC
Sbjct: 321 TNYKGKGVDQLQDLINTIKKNPDSRRMIMNAWNVKDLPLMALPPCHVMSQFYVNDNKLSC 380

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LGIPFNIASY+LLT M+A V   Q GEFIH LGD H+Y+NH +Q  +QL 
Sbjct: 381 MMYQRSCDMGLGIPFNIASYALLTHMIAQVTNMQVGEFIHVLGDAHVYSNHVDQLKIQLE 440

Query: 222 RSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+P   P + IN N     +  F  EDF L  Y  H  I  K++V
Sbjct: 441 RAPYPFPLLKINNNKQYNSIEDFTLEDFELIGYNYHPKIQMKMAV 485


>gi|118403890|ref|NP_001072852.1| thymidylate synthase [Xenopus (Silurana) tropicalis]
 gi|114107689|gb|AAI22925.1| thymidylate synthetase [Xenopus (Silurana) tropicalis]
          Length = 308

 Score =  274 bits (701), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 133/282 (47%), Positives = 185/282 (65%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 27  QYLDQIKHILERGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 86

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWR--------SWP 102
           ++G +N   L   GV IWD     E+ DK       +G+LGP+YG QWR        ++ 
Sbjct: 87  IKGCTNSKELSAKGVKIWDANGSREFLDKQGFSNREEGDLGPVYGFQWRHFGAEYKDTYT 146

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+ +++++++ +P  RR I+ +WN   I  MALPPCH L QFYV + +LSCQ
Sbjct: 147 DYSGQGVDQLRNVIETIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVIDKELSCQ 206

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E   LQL R
Sbjct: 207 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHTEPLKLQLQR 266

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   + ++  F  +DF +  Y PH +I  +++V
Sbjct: 267 TPRPFPKLKILRKVENIDDFTADDFLIEGYNPHPSIKMEMAV 308


>gi|301609223|ref|XP_002934168.1| PREDICTED: thymidylate synthase-like [Xenopus (Silurana)
           tropicalis]
          Length = 308

 Score =  274 bits (701), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 133/282 (47%), Positives = 185/282 (65%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 27  QYLDQIKHILEHGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 86

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWR--------SWP 102
           ++G +N   L   GV IWD     E+ DK       +G+LGP+YG QWR        ++ 
Sbjct: 87  IKGCTNSKELSAKGVKIWDANGSREFLDKQGFSNREEGDLGPVYGFQWRHFGAEYKDTYT 146

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+ +++++++ +P  RR I+ +WN   I  MALPPCH L QFYV + +LSCQ
Sbjct: 147 DYSGQGVDQLRNVIETIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVIDKELSCQ 206

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E   LQL R
Sbjct: 207 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHTEPLKLQLQR 266

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   + ++  F  +DF +  Y PH +I  +++V
Sbjct: 267 TPRPFPKLKILRKVENIDDFTADDFLIEGYNPHPSIKMEMAV 308


>gi|15988336|pdb|1JU6|A Chain A, Human Thymidylate Synthase Complex With Dump And Ly231514,
           A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988337|pdb|1JU6|B Chain B, Human Thymidylate Synthase Complex With Dump And Ly231514,
           A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988338|pdb|1JU6|C Chain C, Human Thymidylate Synthase Complex With Dump And Ly231514,
           A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988339|pdb|1JU6|D Chain D, Human Thymidylate Synthase Complex With Dump And Ly231514,
           A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988342|pdb|1JUJ|A Chain A, Human Thymidylate Synthase Bound To Dump And Ly231514, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988343|pdb|1JUJ|B Chain B, Human Thymidylate Synthase Bound To Dump And Ly231514, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988344|pdb|1JUJ|C Chain C, Human Thymidylate Synthase Bound To Dump And Ly231514, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988345|pdb|1JUJ|D Chain D, Human Thymidylate Synthase Bound To Dump And Ly231514, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
          Length = 313

 Score =  274 bits (701), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G ++ DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVEKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|323448689|gb|EGB04584.1| hypothetical protein AURANDRAFT_38942 [Aureococcus anophagefferens]
          Length = 510

 Score =  274 bits (701), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 132/284 (46%), Positives = 181/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDL+  ++  G  R DRTG GT S FG +M F L    FPLLTTK+V W+ V  EL+
Sbjct: 227 KQYLDLIAEILDRGVRRGDRTGTGTISIFGARMSFSLRNDRFPLLTTKRVFWRGVAEELV 286

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WF+ G +N   L   G+ IWD     E+ D+ G       +LGP+YG QWR +       
Sbjct: 287 WFVSGSTNGKLLADKGIHIWDGNGSREFLDRRGLGHREEMDLGPVYGFQWRHFGAKYVDM 346

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+++ V++++ DP SRR ++SAWN A +D+MALPPCH   QFYV NG+LS
Sbjct: 347 HKDYAGEGVDQLAACVETIKQDPNSRRIVLSAWNPADLDEMALPPCHMFCQFYVANGELS 406

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFNIASY+LLT M+A   G + G+F+H +GD H+Y+NH +   +QL
Sbjct: 407 CQMYQRSADMGLGVPFNIASYALLTRMVAQATGLKPGDFVHVIGDAHVYSNHVDALKVQL 466

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P + INP    +  F + DFT+  Y+P+  I  K++V
Sbjct: 467 QREPRPFPTLTINPAKTGIDDFEFADFTVEGYKPYPKIDMKMAV 510


>gi|12847560|dbj|BAB27620.1| unnamed protein product [Mus musculus]
          Length = 307

 Score =  273 bits (699), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 26  QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 86  IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR   ++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 266 EPRPFQKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307


>gi|149721010|ref|XP_001492275.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Equus
           caballus]
          Length = 312

 Score =  273 bits (699), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R++L   FPLLTTK+V WK V+ ELLWF
Sbjct: 31  QYLGQIEHILRSGFRKEDRTGTGTLSVFGLQARYNLRDEFPLLTTKRVFWKGVLEELLWF 90

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N + L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 91  IKGSTNANELSCKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYKDMDS 150

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 151 DYSGQGVDQLQKVINTIKTNPDDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 210

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH +    QL R
Sbjct: 211 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIDPLKTQLQR 270

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF L  Y PH  I  +++V
Sbjct: 271 EPRPFPKLKILRKVETIDDFKAEDFQLEGYHPHPTIRMEMAV 312


>gi|125984772|ref|XP_001356150.1| GA16493 [Drosophila pseudoobscura pseudoobscura]
 gi|54644469|gb|EAL33210.1| GA16493 [Drosophila pseudoobscura pseudoobscura]
          Length = 330

 Score =  273 bits (699), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 138/285 (48%), Positives = 182/285 (63%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLD ++++I  G  R DRT VGT S FG Q+RFD+   FPLLTTK+V +++VV EL+W
Sbjct: 46  QQYLDFIQYIIGNGERRIDRTNVGTLSVFGSQLRFDMRLSFPLLTTKRVFFRAVVEELIW 105

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ G ++   L    V IWD     E+ DK        G+LGP+YG QWR +        
Sbjct: 106 FVGGKTDAKLLQAKNVHIWDGNSTREYLDKLGHTDRAVGDLGPVYGFQWRHFGAEYGTCD 165

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159
            DY G  IDQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QFYV    G+L
Sbjct: 166 DDYSGKGIDQLRQVIDTIRHNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGEL 225

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+FIHT+GD H+Y NH +    Q
Sbjct: 226 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKTGDFIHTMGDAHVYLNHVDPLKEQ 285

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R PR  P++ I   + ++  FRYEDF +  YEP+  I   ++V
Sbjct: 286 LKRKPRPFPKLNIKRQVENIEDFRYEDFEIIGYEPYPKIKMDMAV 330


>gi|114672489|ref|XP_001150437.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
 gi|114672491|ref|XP_001150499.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
 gi|114672493|ref|XP_001150558.1| PREDICTED: thymidylate synthase isoform 5 [Pan troglodytes]
          Length = 313

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++++P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKSNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|331073|gb|AAA46174.1| thymidylate synthase [Saimiriine herpesvirus 2]
          Length = 294

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 134/283 (47%), Positives = 180/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL  ++H++ +GS + DRTG GT S FG Q RF L   FPLLTTK+V W+ VV ELLW
Sbjct: 12  HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDE-----------WADKD-GELGPIYGVQWRSWP------- 102
           F+RG ++   L   GV IWD            + D+D G+LGP+YG QWR +        
Sbjct: 72  FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYKGVG 131

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++ +++ +P  RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC
Sbjct: 132 RDYKGEGVDQLKQLIDTIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT M+A V     GEFIHT+GD H+Y +H +   +QL+
Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVLGEFIHTIGDAHIYVDHIDALKMQLT 251

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P +    N+  +  F+ +D  L +Y PH  I   ++V
Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294


>gi|13096425|pdb|1HW4|A Chain A, Structure Of Thymidylate Synthase Suggests Advantages Of
           Chemotherapy With Noncompetitive Inhibitors
          Length = 355

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 74  QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 133

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 134 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 193

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 194 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPCHALXQFYVVNSELSCQ 253

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 254 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 313

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 314 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 355


>gi|189095969|pdb|2RD8|A Chain A, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016200|pdb|2RDA|A Chain A, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016201|pdb|2RDA|B Chain B, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016202|pdb|2RDA|C Chain C, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016203|pdb|2RDA|D Chain D, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016204|pdb|2RDA|E Chain E, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016205|pdb|2RDA|F Chain F, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|295982231|pdb|3H9K|A Chain A, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|295982232|pdb|3H9K|B Chain B, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|295982233|pdb|3H9K|C Chain C, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|295982234|pdb|3H9K|D Chain D, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|295982235|pdb|3H9K|E Chain E, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|296863446|pdb|3HB8|A Chain A, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|296863447|pdb|3HB8|B Chain B, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|296863448|pdb|3HB8|C Chain C, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|296863449|pdb|3HB8|D Chain D, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|296863450|pdb|3HB8|E Chain E, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|315364512|pdb|3OB7|A Chain A, Human Thymidylate Synthase R163k With Cys 195 Covalently
           Modified By Glutathione
 gi|315364513|pdb|3OB7|B Chain B, Human Thymidylate Synthase R163k With Cys 195 Covalently
           Modified By Glutathione
 gi|315364514|pdb|3OB7|C Chain C, Human Thymidylate Synthase R163k With Cys 195 Covalently
           Modified By Glutathione
 gi|315364515|pdb|3OB7|D Chain D, Human Thymidylate Synthase R163k With Cys 195 Covalently
           Modified By Glutathione
 gi|315364516|pdb|3OB7|E Chain E, Human Thymidylate Synthase R163k With Cys 195 Covalently
           Modified By Glutathione
          Length = 313

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|290560083|pdb|3EAW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALXQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|30348576|emb|CAC84368.1| thymidylate synthase [Saimiriine herpesvirus 2]
          Length = 294

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 135/283 (47%), Positives = 180/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL  ++H++ +GS + DRTG GT S FG Q RF L   FPLLTTK+V W+ VV ELLW
Sbjct: 12  HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDE-----------WADKD-GELGPIYGVQWR--------SW 101
           F+RG ++   L   GV IWD            + D+D G+LGP+YG QWR        S 
Sbjct: 72  FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYRGSK 131

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++ +++ +P  RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC
Sbjct: 132 RDYKGEGVDQLKQLIATIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT M+A V     GEFIHT+GD H+Y +H +   +QL+
Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVPGEFIHTIGDAHIYVDHIDALKMQLT 251

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P +    N+  +  F+ +D  L +Y PH  I   ++V
Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294


>gi|169822911|gb|ACA96515.1| thymidylate synthase [Expression vector pYB100]
          Length = 325

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 44  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 103

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 104 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 163

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 164 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 223

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 224 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 283

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 284 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 325


>gi|290560115|pdb|3GG5|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560116|pdb|3GG5|B Chain B, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560117|pdb|3GG5|C Chain C, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560118|pdb|3GG5|D Chain D, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  273 bits (697), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|290560086|pdb|3EDW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560094|pdb|3EJL|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560095|pdb|3EJL|B Chain B, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560096|pdb|3EJL|C Chain C, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560097|pdb|3EJL|D Chain D, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  273 bits (697), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|4507751|ref|NP_001062.1| thymidylate synthase [Homo sapiens]
 gi|136611|sp|P04818|TYSY_HUMAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|37479|emb|CAA26178.1| unnamed protein product [Homo sapiens]
 gi|220136|dbj|BAA00472.1| thymidylate synthase [Homo sapiens]
 gi|12803483|gb|AAH02567.1| Thymidylate synthetase [Homo sapiens]
 gi|15530267|gb|AAH13919.1| Thymidylate synthetase [Homo sapiens]
 gi|21104406|dbj|BAB93473.1| thymidylate synthetase [Homo sapiens]
 gi|30582461|gb|AAP35457.1| thymidylate synthetase [Homo sapiens]
 gi|53733365|gb|AAH83512.1| TYMS protein [Homo sapiens]
 gi|60655085|gb|AAX32106.1| thymidylate synthetase [synthetic construct]
 gi|60814259|gb|AAX36293.1| thymidylate synthetase [synthetic construct]
 gi|61355304|gb|AAX41125.1| thymidylate synthetase [synthetic construct]
 gi|119622126|gb|EAX01721.1| thymidylate synthetase, isoform CRA_f [Homo sapiens]
 gi|123982668|gb|ABM83075.1| thymidylate synthetase [synthetic construct]
 gi|189054310|dbj|BAG36830.1| unnamed protein product [Homo sapiens]
 gi|307685173|dbj|BAJ20517.1| thymidylate synthetase [synthetic construct]
          Length = 313

 Score =  273 bits (697), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|195398227|ref|XP_002057724.1| GJ18288 [Drosophila virilis]
 gi|194141378|gb|EDW57797.1| GJ18288 [Drosophila virilis]
          Length = 348

 Score =  273 bits (697), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 135/284 (47%), Positives = 178/284 (62%), Gaps = 22/284 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  +  +IK G  R DRT VGT S FG QMRFDL K FPLLTTK+V ++ V  ELLWF
Sbjct: 65  QYLLFIERIIKNGDKRVDRTRVGTLSIFGAQMRFDLRKSFPLLTTKRVFFRGVAEELLWF 124

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           + G ++   L    V IWD  + ++            G+LGP+YG QWR +         
Sbjct: 125 IAGKTDAKILQAKKVHIWDANSTREFLDNCGHTDRAVGDLGPVYGFQWRHFGAEYRTCDD 184

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKLS 160
           DY G  +DQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QF+V    G+LS
Sbjct: 185 DYTGQGVDQLQQVIHTIRTNPSDRRIIMSAWNPMDIPKMALPPCHCLVQFFVSQSKGELS 244

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT ++A V G + GEFIHT+GD H+Y NH E    Q+
Sbjct: 245 CQLYQRSADMGLGVPFNIASYALLTYLIAHVTGLKPGEFIHTIGDAHVYLNHIEPLQQQI 304

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            RSP+  P++ I   + ++  F YEDF +  Y P  AI  +++V
Sbjct: 305 KRSPKPFPKLNIKRQVTNIEDFCYEDFEIVGYNPDKAIPMEMAV 348


>gi|7330001|gb|AAF59990.1|AF210726_11 thymidylate synthetase [Rhesus monkey rhadinovirus H26-95]
          Length = 333

 Score =  273 bits (697), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  L  +IK G  R DRTGVGTRS FG Q R++L   FPLLTTK+V W+ VV ELLWF
Sbjct: 52  QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------P 102
           +RG ++ + L R GV IWD    +            +G+LGP+YG QWR +         
Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y+G  +DQ+  +V  +   P+ RR ++ AWN A + +MALPPCH L QFYV  G+LSCQ
Sbjct: 172 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRS D+ LG+PFNIASY+LLT ++A V G   G+F+HTLGD H+YNNH +   LQL R
Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 291

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   +  L  F   D +L  Y+PH  I  +++V
Sbjct: 292 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 333


>gi|290560120|pdb|3GH2|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  273 bits (697), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|297702332|ref|XP_002828137.1| PREDICTED: thymidylate synthase-like isoform 1 [Pongo abelii]
 gi|297702334|ref|XP_002828138.1| PREDICTED: thymidylate synthase-like isoform 2 [Pongo abelii]
          Length = 313

 Score =  273 bits (697), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|9626026|ref|NP_040272.1| thymidylate synthase [Saimiriine herpesvirus 2]
 gi|136610|sp|P06854|TYSY_SHV21 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|66442|pir||SYBEHS thymidylate synthase (EC 2.1.1.45) - saimiriine herpesvirus 1
 gi|60391|emb|CAA45693.1| thymidylate synthase [Saimiriine herpesvirus 2]
 gi|330999|gb|AAA46146.1| thymidylate synthase [Saimiriine herpesvirus 2]
 gi|331075|gb|AAA46175.1| dTMP synthase [Saimiriine herpesvirus 2]
          Length = 294

 Score =  273 bits (697), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 134/283 (47%), Positives = 180/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL  ++H++ +GS + DRTG GT S FG Q RF L   FPLLTTK+V W+ VV ELLW
Sbjct: 12  HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDE-----------WADKD-GELGPIYGVQWRSWP------- 102
           F+RG ++   L   GV IWD            + D+D G+LGP+YG QWR +        
Sbjct: 72  FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYKGVG 131

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++ +++ +P  RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC
Sbjct: 132 RDYKGEGVDQLKQLIDTIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT M+A V     GEFIHT+GD H+Y +H +   +QL+
Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVPGEFIHTIGDAHIYVDHIDALKMQLT 251

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P +    N+  +  F+ +D  L +Y PH  I   ++V
Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294


>gi|290560090|pdb|3EF9|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560119|pdb|3GH0|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|30584493|gb|AAP36499.1| Homo sapiens thymidylate synthetase [synthetic construct]
 gi|60826011|gb|AAX36743.1| thymidylate synthetase [synthetic construct]
 gi|61365335|gb|AAX42692.1| thymidylate synthetase [synthetic construct]
 gi|61371785|gb|AAX43730.1| thymidylate synthetase [synthetic construct]
 gi|61371791|gb|AAX43731.1| thymidylate synthetase [synthetic construct]
          Length = 314

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|242006823|ref|XP_002424244.1| Thymidylate synthase, putative [Pediculus humanus corporis]
 gi|212507613|gb|EEB11506.1| Thymidylate synthase, putative [Pediculus humanus corporis]
          Length = 316

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 131/283 (46%), Positives = 188/283 (66%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QY++ +++++K G + +DRTGVGT S FG QM++ L   FPLLTTK+V WK +V ELLW
Sbjct: 34  YQYINHIKNIMKNGVEMKDRTGVGTLSIFGAQMKWSLKDVFPLLTTKRVFWKGIVEELLW 93

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           FLRG +N   L   GVSIWD     E+ D       ++G+LGP+YG QWR +        
Sbjct: 94  FLRGSTNALELKEKGVSIWDANSSREFLDSLGFYDREEGDLGPVYGFQWRHFGAKYKTMH 153

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    IDQ+ +I+ +++  PY RR I+SAWN   I  MALPPCHCL QF+V NG+L+ 
Sbjct: 154 DDYTNQGIDQLQNIIDTIKKRPYDRRMIMSAWNPVDIPIMALPPCHCLVQFHVANGELNS 213

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V   + G F+H++GD H+Y NH +  ++Q+ 
Sbjct: 214 QMYQRSADMGLGVPFNIASYSLLTYMVAHVTNLKPGVFVHSMGDSHIYLNHLKPLEVQIQ 273

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P++ I   + ++  F+++DF L  Y P+  I  +++V
Sbjct: 274 RTPRPFPKLSIVRQVSNINDFKFDDFKLEGYNPYPKIQMEMAV 316


>gi|77550896|gb|ABA93693.1| Bifunctional dihydrofolate reductase-thymidylate synthase,
           putative, expressed [Oryza sativa Japonica Group]
          Length = 521

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL+L+  +I+ G+ + DRTG GT S FG QMRF+L   FPLLTTKKV W+ VV ELLW
Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+ G ++   L   G+ IWD     E+ D       ++G+LGP+YG QWR +        
Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN + + KMALPPCH   QFYV++G+LSC
Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVESGELSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V G   GEF+H +GD H+Y  H    + Q+ 
Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAHVCGLSPGEFVHVIGDAHVYRTHVRALEEQIQ 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP   D+ SF   DF L  Y+PH  I  K+++
Sbjct: 479 KLPKPFPVLKINPLKKDIDSFVASDFKLVGYDPHQKIEMKMAI 521


>gi|18653820|ref|NP_570754.1| thymidylate synthase [Macacine herpesvirus 5]
 gi|5823015|gb|AAD53009.1|AF087411_2 thymidylate synthase [Macacine herpesvirus 5]
 gi|4494918|gb|AAD21340.1| thymidylate synthase [Macaca mulatta rhadinovirus 17577]
          Length = 333

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  L  +IK G  R DRTGVGTRS FG Q R++L   FPLLTTK+V W+ VV ELLWF
Sbjct: 52  QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------P 102
           +RG ++ + L R GV IWD    +            +G+LGP+YG QWR +         
Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y+G  +DQ+  +V  +   P+ RR ++ AWN A + +MALPPCH L QFYV  G+LSCQ
Sbjct: 172 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRS D+ LG+PFNIASY+LLT ++A V G   G+F+HTLGD H+YNNH +   LQL R
Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 291

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   +  L  F   D +L  Y+PH  I  +++V
Sbjct: 292 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 333


>gi|14277914|pdb|1HZW|A Chain A, Crystal Structure Of Human Thymidylate Synthase
 gi|14277915|pdb|1HZW|B Chain B, Crystal Structure Of Human Thymidylate Synthase
 gi|14277916|pdb|1I00|A Chain A, Crystal Structure Of Human Thymidylate Synthase, Ternary
           Complex With Dump And Tomudex
 gi|14277917|pdb|1I00|B Chain B, Crystal Structure Of Human Thymidylate Synthase, Ternary
           Complex With Dump And Tomudex
          Length = 290

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 9   QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 68

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 69  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 128

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 129 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 188

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 189 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 248

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 249 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 290


>gi|306774132|ref|NP_001182436.1| thymidylate synthase [Macaca mulatta]
          Length = 313

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRGEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|13096294|pdb|1HVY|A Chain A, Human Thymidylate Synthase Complexed With Dump And
           Raltitrexed, An Antifolate Drug, Is In The Closed
           Conformation
 gi|13096295|pdb|1HVY|B Chain B, Human Thymidylate Synthase Complexed With Dump And
           Raltitrexed, An Antifolate Drug, Is In The Closed
           Conformation
 gi|13096296|pdb|1HVY|C Chain C, Human Thymidylate Synthase Complexed With Dump And
           Raltitrexed, An Antifolate Drug, Is In The Closed
           Conformation
 gi|13096297|pdb|1HVY|D Chain D, Human Thymidylate Synthase Complexed With Dump And
           Raltitrexed, An Antifolate Drug, Is In The Closed
           Conformation
          Length = 288

 Score =  272 bits (695), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 7   QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 66

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 67  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 126

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 127 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 186

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 187 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 246

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 247 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 288


>gi|290560085|pdb|3ED7|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 295

 Score =  272 bits (695), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 14  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 74  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 133

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 134 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 193

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 194 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 253

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 254 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 295


>gi|18859519|ref|NP_571835.1| thymidylate synthase [Danio rerio]
 gi|9795378|gb|AAF97476.1| thymidylate synthase [Danio rerio]
          Length = 319

 Score =  272 bits (695), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 129/281 (45%), Positives = 178/281 (63%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+  +++ G+ + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 39  YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98

Query: 64  RGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PD 103
           +G +N   L   GV IWD     E+ DK       +G+LGP+YG QWR +         D
Sbjct: 99  KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 158

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++ +++++P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQL
Sbjct: 159 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 218

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E    Q+ R 
Sbjct: 219 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 278

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR  P++ I   +  +  F  EDF +  Y+PH  I  +++V
Sbjct: 279 PRPFPKLRIKRKVEQINDFCAEDFEIYDYDPHPTIKMQMAV 319


>gi|29124532|gb|AAH49026.1| Tyms protein [Danio rerio]
          Length = 319

 Score =  272 bits (695), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 129/281 (45%), Positives = 178/281 (63%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+  +++ G+ + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 39  YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98

Query: 64  RGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PD 103
           +G +N   L   GV IWD     E+ DK       +G+LGP+YG QWR +         D
Sbjct: 99  KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 158

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++ +++++P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQL
Sbjct: 159 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 218

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E    Q+ R 
Sbjct: 219 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 278

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR  P++ I   +  +  F  EDF +  Y+PH  I  +++V
Sbjct: 279 PRPFPKLRIKRKVEQINDFCAEDFEIYDYDPHPTIKMQMAV 319


>gi|312963676|ref|ZP_07778157.1| Thymidylate synthase [Pseudomonas fluorescens WH6]
 gi|311282185|gb|EFQ60785.1| Thymidylate synthase [Pseudomonas fluorescens WH6]
          Length = 277

 Score =  271 bits (694), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 128/277 (46%), Positives = 179/277 (64%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GT++ F  Q R +L+ GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKQYLELLNDVVTNGLTKGDRTGTGTKAVFARQYRHNLADGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L G++N+ +L+ +GV IWDEWA +DG+LGP+YG QW +WP  DG  I+QI  +V +L+
Sbjct: 61  WMLSGNTNIKWLNENGVRIWDEWATEDGDLGPVYGEQWTAWPTKDGGTINQIDYMVHTLK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              K ALPPCH L+Q +V +G LS QLY RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDETKSPQENARNGKQALPPCHLLYQAFVHDGHLSMQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+P+N A+ +LLT MLA        E I T GD H Y+NH EQ   QL+R+P+ L
Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVTTGDTHAYSNHMEQIRTQLARTPKKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+++I      +  +++EDF +  YE   +I A V++
Sbjct: 241 PELVIKRKPESIYDYKFEDFEIVGYEADPSIKADVAI 277


>gi|2625048|gb|AAC58691.1| thymidylate synthase homolog [rhesus monkey rhadinovirus H26-95]
          Length = 282

 Score =  271 bits (694), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  L  +IK G  R DRTGVGTRS FG Q R++L   FPLLTTK+V W+ VV ELLWF
Sbjct: 1   QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 60

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------P 102
           +RG ++ + L R GV IWD    +            +G+LGP+YG QWR +         
Sbjct: 61  IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 120

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y+G  +DQ+  +V  +   P+ RR ++ AWN A + +MALPPCH L QFYV  G+LSCQ
Sbjct: 121 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 180

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRS D+ LG+PFNIASY+LLT ++A V G   G+F+HTLGD H+YNNH +   LQL R
Sbjct: 181 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 240

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   +  L  F   D +L  Y+PH  I  +++V
Sbjct: 241 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 282


>gi|229593185|ref|YP_002875304.1| thymidylate synthase [Pseudomonas fluorescens SBW25]
 gi|259550806|sp|C3K3Q8|TYSY_PSEFS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|229365051|emb|CAY53232.1| thymidylate synthase [Pseudomonas fluorescens SBW25]
          Length = 277

 Score =  271 bits (693), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 127/277 (45%), Positives = 179/277 (64%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GT++ F  Q R +L+ GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKQYLELLNDVVTNGLTKGDRTGTGTKAVFARQYRHNLADGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L G++N+ +L+ +GV IWDEWA +DG+LGP+YG QW +WP  DG  I+QI  +V +L+
Sbjct: 61  WMLSGNTNIKWLNENGVKIWDEWATEDGDLGPVYGEQWTAWPTKDGGTINQIDYMVHTLK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              K ALPPCH L+Q +V +G LS QLY RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDETKSPQENARNGKQALPPCHLLYQAFVHDGHLSMQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+P+N A+ +LLT MLA        E I T GD H Y+NH EQ   QL+R+P+ L
Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVTTGDTHAYSNHMEQIRTQLARTPKKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+++I      +  +++EDF +  Y+   +I A V++
Sbjct: 241 PELVIKRKPASIYDYKFEDFEIVGYDADPSIKADVAI 277


>gi|41351139|gb|AAH65845.1| Tyms protein [Danio rerio]
          Length = 318

 Score =  271 bits (693), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 129/281 (45%), Positives = 177/281 (62%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+  +++ G+ + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 38  YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 97

Query: 64  RGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PD 103
           +G +N   L   GV IWD     E+ DK       +G+LGP+YG QWR +         D
Sbjct: 98  KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 157

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++ +++++P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQL
Sbjct: 158 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 217

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E    Q+ R 
Sbjct: 218 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 277

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR  P++ I   +  +  F  EDF +  Y PH  I  +++V
Sbjct: 278 PRPFPKLRIKRKVEQINDFCAEDFEIYDYNPHPTIKMQMAV 318


>gi|331017946|gb|EGH98002.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 277

 Score =  271 bits (693), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 132/277 (47%), Positives = 179/277 (64%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LLR VI+ GS++ DRTG GT + FG Q R +L+ GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKQYLELLRDVIENGSEKGDRTGTGTTAVFGRQFRHNLADGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L G +N  +L+ +GV+IWDEWA +DG+LGP+YG QW  WP  DG  I+QI  +V  L+
Sbjct: 61  WMLSGSTNTKWLNENGVTIWDEWATEDGDLGPVYGAQWTGWPTKDGGKINQIDYMVDCLK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WN   +              K AL  CH L+Q +V +GKLS QLY RS
Sbjct: 121 NNPNSRRILFHGWNTEYLPDEKLSPQENVKNGKQALAVCHLLYQAFVADGKLSMQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+P+N A+ +LLT MLA        E I +LGD H Y NH +Q + QL R+P+ L
Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVSLGDAHAYANHRDQINTQLLRAPKKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PQ+IIN     +  +++EDF +  YE   +I A V++
Sbjct: 241 PQLIINRRPSSIYDYKFEDFEVVGYEADPSIRAPVAI 277


>gi|240848723|ref|NP_001155666.1| thymidylate synthase-like [Acyrthosiphon pisum]
 gi|239790855|dbj|BAH71962.1| ACYPI006453 [Acyrthosiphon pisum]
          Length = 299

 Score =  271 bits (693), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 131/284 (46%), Positives = 180/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLD ++ +++ G  + DRT VGT S FG QMR++L  G FPLLTTK+V W+ VV ELL
Sbjct: 16  QQYLDHIKKILEKGHKKMDRTRVGTLSLFGIQMRYNLMDGVFPLLTTKRVFWRGVVEELL 75

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WF++G +N   L    V +WD  + +            +G+LGP+YG QWR +       
Sbjct: 76  WFIKGSTNSKELSEKDVKVWDANSTRSYLDSIGLTDREEGDLGPVYGFQWRHYGAEYVDV 135

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+ +++ +++ +P  RR ++ AWN   + KMALPPCHCL QF+V +G LS
Sbjct: 136 HTDYSGKGIDQLQNVINTIKTNPDDRRMLMIAWNPCDVPKMALPPCHCLVQFFVADGYLS 195

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH +   +QL
Sbjct: 196 CQMYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHIYLNHVDALKIQL 255

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P+  P + IN  +  +  F + DFTL  Y P+  I   ++V
Sbjct: 256 QRKPKQFPTLTINREVKSIDDFNFSDFTLSGYVPYPKISMDMAV 299


>gi|62898305|dbj|BAD97092.1| thymidylate synthetase variant [Homo sapiens]
          Length = 313

 Score =  271 bits (692), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PF+IASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFDIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|114053279|ref|NP_001040281.1| thymidylate synthase isoform 1 [Bombyx mori]
 gi|87248619|gb|ABD36362.1| thymidylate synthase isoform 1 [Bombyx mori]
          Length = 298

 Score =  270 bits (691), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 134/284 (47%), Positives = 176/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60
           +QYL L+  +IK G  R DRTGVGT S FG   R+ L +   PLLTTK+V  + V+ ELL
Sbjct: 15  YQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIEELL 74

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR--------S 100
           W + G ++   L   GV IWD    +            +G+LGP+YG QWR         
Sbjct: 75  WMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKYIDC 134

Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+ S++ S++ +P  RR ++ AWN + + KMALPPCHCL QFYV +GKLS
Sbjct: 135 QTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFYVADGKLS 194

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASYSLLT M+A V G+Q GEFIHT GD H+Y NH E   +QL
Sbjct: 195 CLLYQRSADMGLGVPFNIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPLKIQL 254

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P+  P +     I  +  F+YEDF ++ Y+PH  I  +++V
Sbjct: 255 QREPKQFPTLEFARKIESIDDFKYEDFIIKDYKPHPKIEMEMAV 298


>gi|330983977|gb|EGH82080.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 277

 Score =  270 bits (691), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 135/277 (48%), Positives = 178/277 (64%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  VI  G  + DRTG GT++ FG Q R +L+ GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKAYLDLLTDVITNGVVKGDRTGTGTKAVFGRQFRHNLADGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L G++NV++L  +GVSIW+EWA +DG LGP+YG QW +WP  DG  I+QI  ++  L+
Sbjct: 61  WMLSGNTNVNWLKENGVSIWNEWATEDGYLGPLYGEQWTAWPTKDGGTINQIDYVINMLK 120

Query: 121 ADPYSRRHIVSAWNVALI-------------DKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              KMALPPCH L+QFYV + KLS  LY RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDESMSPQENARNGKMALPPCHLLYQFYVADNKLSSHLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+ LG P+N+AS SLLT MLA        E I T GD H Y NH +Q   QLSR+PR L
Sbjct: 181 SDLLLGNPYNLASVSLLTHMLAQQCDLIPHEVIITTGDTHAYLNHMDQIHEQLSRTPRKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I      +  +R+EDF +  Y+P+ +I A V+V
Sbjct: 241 PELKILRKPDSIYDYRFEDFEIVGYDPYPSIKAPVAV 277


>gi|256032572|pdb|3EHI|X Chain X, Crystal Structure Of Human Thymidyalte Synthase M190k With
           Loop 181-197 Stabilized In The Inactive Conformation
          Length = 313

 Score =  270 bits (691), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +   ALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLKALPPCHALXQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|299469759|emb|CBN76613.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 581

 Score =  270 bits (691), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 130/283 (45%), Positives = 179/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61
           QYL+L+  ++  G  R DRTG GT S FG QMRF L  + FPLLTTK+V W+ V  ELLW
Sbjct: 299 QYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLW 358

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+ G +N + L   G+ IWD     E+ D       ++G+LGP+YG QWR +        
Sbjct: 359 FVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMH 418

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++  +Q ++ +P  RR ++SAWN A + KMALPPCH   QFYV  G+LSC
Sbjct: 419 ADYTGKGVDQLAECIQKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSC 478

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT ++A   G + G+F+HT+GD H+Y NH +    QL 
Sbjct: 479 QMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGDFVHTIGDAHVYVNHVDALREQLK 538

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P + IN +  D+ SF Y+   ++ Y P+  I  K++V
Sbjct: 539 RKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 581


>gi|46519351|gb|AAS99999.1| JM22 [Macaca fuscata rhadinovirus]
          Length = 333

 Score =  270 bits (691), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 135/282 (47%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  L  +I+ G  R DRTGVGTRS FG Q R++L   FPLLTTK+V W+ VV ELLWF
Sbjct: 52  QYLAHLDLIIRHGVQRDDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------P 102
           +RG ++ + L R GV IWD    +            +G+LGP+YG QWR +         
Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY+G  +DQ+  +V  +   P+ RR ++ AWN A + +MALPPCH L QFYV  G+LSCQ
Sbjct: 172 DYEGQGVDQLRYVVDLIVRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRS D+ LG+PFNIASY+LLT ++A V G   G+F+HTLGD H+YNNH     LQL R
Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVGPLLLQLGR 291

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   +  L  F   D +L  Y+PH  I  +++V
Sbjct: 292 TPRPFPRLKILRKVTRLEDFTRADLSLEGYDPHPHIEMEMAV 333


>gi|189236060|ref|XP_970584.2| PREDICTED: similar to bifunctional dihydrofolate
           reductase-thymidylate synthase [Tribolium castaneum]
          Length = 303

 Score =  270 bits (691), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 137/284 (48%), Positives = 180/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL  ++ +I  G  + DRTGVGT S FG QMR+ L    FPLLTTK+V W+ VV ELL
Sbjct: 20  YQYLSHIKLIIDKGVKKSDRTGVGTFSIFGAQMRYSLRDNVFPLLTTKRVFWRGVVEELL 79

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSWP------ 102
           WF++G +N + L    V IWD     E+ D       ++G+LGP+YG QWR +       
Sbjct: 80  WFIKGSTNANELKEKNVHIWDANSTREFLDSVGLNEREEGDLGPVYGFQWRHFGAEYKGM 139

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    IDQ++ +++++R  P  RR I+ AWN   I +MALPPCHCL QF+V NG+LS
Sbjct: 140 HWDYANQGIDQLAHVIETIRNKPNDRRIIMCAWNPVDIPEMALPPCHCLVQFFVANGELS 199

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E    QL
Sbjct: 200 CLLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHVYLNHVEPLQEQL 259

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+PR  P + I   +  +  F ++DF L  YEPH  +   ++V
Sbjct: 260 KRTPRPFPTLKIKRQVSSIEDFVFDDFELSGYEPHPKLSMPMAV 303


>gi|9631261|ref|NP_048042.1| thymidylate synthase [Ateline herpesvirus 3]
 gi|4019297|gb|AAC95595.1| thymidylate synthase [Ateline herpesvirus 3]
          Length = 290

 Score =  270 bits (691), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 135/283 (47%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL  ++H++  G+ + DRTGVGT S FG Q R+ L K FPLLTTK+V W+ VV ELLW
Sbjct: 8   HQYLSQVKHILNCGNFKHDRTGVGTLSVFGMQSRYSLEKDFPLLTTKRVFWRGVVEELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSWP------- 102
           F+RG ++   L   GV IWD      + DK       +G+LGP+YG QWR +        
Sbjct: 68  FIRGSTDSKELAASGVHIWDANGSRSYLDKLGFCDREEGDLGPVYGFQWRHFGAEYQGLK 127

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y G  +DQ+  I+ ++  +P  RR ++ AWNV  + KMALPPCH L QFYV +GKLSC
Sbjct: 128 HNYGGEGVDQLKQIINTIHTNPTDRRMLMCAWNVLDVPKMALPPCHVLSQFYVCDGKLSC 187

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT M+A V     GEFIHTLGD H+Y NH +    QL+
Sbjct: 188 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTDLVPGEFIHTLGDAHIYVNHIDALTEQLT 247

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P +     I  +  F+  D  L +Y P+ +I   ++V
Sbjct: 248 RTPRPFPTLKFARKIASIDDFKANDIILENYNPYPSIKMPMAV 290


>gi|295692816|ref|YP_003601426.1| thymidylate synthase [Lactobacillus crispatus ST1]
 gi|295030922|emb|CBL50401.1| Thymidylate synthase [Lactobacillus crispatus ST1]
          Length = 303

 Score =  270 bits (691), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 137/300 (45%), Positives = 174/300 (58%), Gaps = 50/300 (16%)

Query: 15  GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74
           G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV +  +  ELLWFLRGD+N+ +L  
Sbjct: 4   GHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLWFLRGDTNIRFLLE 63

Query: 75  HGVSIWDEWADKD----------------------------------------------- 87
           H   IWDEWA K+                                               
Sbjct: 64  HNNHIWDEWAFKNWIESAEYQGPDMTNFGLRSQSDPEFNQVYQAEMRKFNQRILDDPAFA 123

Query: 88  ---GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144
              G LG +YG QWR W    G  IDQI+ +++ ++  P SRR IV+AWN   +   ALP
Sbjct: 124 QKYGNLGDVYGAQWRHWEKRTGGFIDQIADVIKQIKETPDSRRMIVTAWNPEDVPTSALP 183

Query: 145 PCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204
           PCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  M+A   G + GEF+HTLG
Sbjct: 184 PCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARETGLKVGEFVHTLG 243

Query: 205 DVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           D H+Y NHF Q    LSR+P   P++ +NP    +  F  +D  + +Y+ H  I A V+V
Sbjct: 244 DAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLNYQHHGTIKAPVAV 303


>gi|270005647|gb|EFA02095.1| hypothetical protein TcasGA2_TC007732 [Tribolium castaneum]
          Length = 330

 Score =  270 bits (690), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 137/284 (48%), Positives = 180/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL  ++ +I  G  + DRTGVGT S FG QMR+ L    FPLLTTK+V W+ VV ELL
Sbjct: 47  YQYLSHIKLIIDKGVKKSDRTGVGTFSIFGAQMRYSLRDNVFPLLTTKRVFWRGVVEELL 106

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSWP------ 102
           WF++G +N + L    V IWD     E+ D       ++G+LGP+YG QWR +       
Sbjct: 107 WFIKGSTNANELKEKNVHIWDANSTREFLDSVGLNEREEGDLGPVYGFQWRHFGAEYKGM 166

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    IDQ++ +++++R  P  RR I+ AWN   I +MALPPCHCL QF+V NG+LS
Sbjct: 167 HWDYANQGIDQLAHVIETIRNKPNDRRIIMCAWNPVDIPEMALPPCHCLVQFFVANGELS 226

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E    QL
Sbjct: 227 CLLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHVYLNHVEPLQEQL 286

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+PR  P + I   +  +  F ++DF L  YEPH  +   ++V
Sbjct: 287 KRTPRPFPTLKIKRQVSSIEDFVFDDFELSGYEPHPKLSMPMAV 330


>gi|320163301|gb|EFW40200.1| thymidylate synthase [Capsaspora owczarzaki ATCC 30864]
          Length = 337

 Score =  270 bits (690), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 131/284 (46%), Positives = 179/284 (63%), Gaps = 22/284 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL+R +I+ G +R DRTG GTRS FG QMRF L  G  PLLTTK+V W+ V  ELLW
Sbjct: 54  QYLDLIRAIIENGDERLDRTGTGTRSIFGAQMRFSLRDGVMPLLTTKRVFWRGVAEELLW 113

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101
           F+ G++N + L    + IWD    +            +G+LGP+YG QWR +        
Sbjct: 114 FVAGNTNATALSDKDIHIWDANGSRAFLDGRGLQHREEGDLGPVYGFQWRHFGAPYTTMH 173

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LS 160
            DY+G  +DQ+  ++++++ +P  RR I+SAWN   I  MALPPCH + QF+V + K LS
Sbjct: 174 ADYEGKGVDQLKHVIETIKTNPNDRRLIISAWNPVDIPNMALPPCHMMCQFHVSSKKELS 233

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C +YQRS D+ LG+PFNIASY+LLT+M+A V G   GE +HT+GD H+Y NH +    QL
Sbjct: 234 CLMYQRSADMGLGVPFNIASYALLTIMVAEVTGLTPGELVHTIGDAHVYLNHIDPLKEQL 293

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P   +N  + ++  FR+EDF +  Y PHA I   ++V
Sbjct: 294 KREPRPFPTFKLNRKVTEIDDFRFEDFVITGYNPHAKIEMDMAV 337


>gi|170051025|ref|XP_001861577.1| thymidylate synthase [Culex quinquefasciatus]
 gi|167872454|gb|EDS35837.1| thymidylate synthase [Culex quinquefasciatus]
          Length = 310

 Score =  270 bits (689), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 133/283 (46%), Positives = 183/283 (64%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61
           QYL+L R +I  G+ R DRTGVGT S FG QMR++L +   PLLTTK+V ++ V  ELLW
Sbjct: 28  QYLELTRRIIAKGNKRLDRTGVGTLSIFGSQMRYNLRNNTLPLLTTKRVFFRGVAEELLW 87

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+RG +N   L +  + IWD     E+ D       ++G+LGP+YG QWR +        
Sbjct: 88  FIRGRTNAKDLQQKNIHIWDGNSTREFLDSAGFTDREEGDLGPVYGFQWRHFGAKYKTCD 147

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  IDQ++ ++  ++ +P  RR I+SAWN   I +MALPPCHCL QF+V +G+LSC
Sbjct: 148 DDYTGEGIDQLAEVINRIKTNPTDRRIIMSAWNPVDIPQMALPPCHCLAQFFVSDGELSC 207

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASY+LLT M+A V G Q G+F+HT GD H+Y NH E    QL 
Sbjct: 208 QLYQRSADMGLGVPFNIASYALLTHMIAHVTGLQPGDFVHTTGDTHVYLNHVEPLQAQLM 267

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P+  P +     +  +  F++EDF +R Y+P+  I  +++V
Sbjct: 268 RKPKPFPTLHFKRVVQSIDDFQFEDFDVRGYDPYPTIKMQMAV 310


>gi|219111327|ref|XP_002177415.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411950|gb|EEC51878.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 495

 Score =  270 bits (689), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 132/283 (46%), Positives = 178/283 (62%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL RH++  G  R DRTG GT S FG QMRF L  G  PLLTTK+V W+ V  ELLW
Sbjct: 213 QYLDLCRHILDHGVRRGDRTGTGTLSQFGTQMRFSLRDGTLPLLTTKRVFWRGVAEELLW 272

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+ G++N + L    + IWD    +D            G+LGP+YG QWR +        
Sbjct: 273 FVAGNTNANDLAAKDIRIWDGNGSRDFLDSRGLGHREVGDLGPVYGFQWRHFGATYGTMH 332

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++  +  ++ +P  RR I+SAWN A ++ MALPPCH   QFYV    LSC
Sbjct: 333 DDYTGKGVDQLAECIDKIKNNPEDRRIILSAWNPADLELMALPPCHMFCQFYVRTASLSC 392

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH +    QL 
Sbjct: 393 QMYQRSADMGLGVPFNIASYALLTHMIAHVTGRKPGDFVHTIGDAHVYLNHVDALQTQLE 452

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P++ INP+  ++  F + DFT+  Y+PH  I  +++V
Sbjct: 453 RTPRAFPKLQINPDKQNIDDFVFADFTVVGYQPHKTIKMEMAV 495


>gi|300120673|emb|CBK20227.2| Thymidylate synthase [Blastocystis hominis]
          Length = 495

 Score =  270 bits (689), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYL+L+R+++  G+ R DRT  GTRS FG QMRF L+ G  PLLTTKKV W+ +V ELLW
Sbjct: 203 QYLNLIRYILDHGALRTDRTNTGTRSVFGTQMRFLLANGVIPLLTTKKVFWRGIVEELLW 262

Query: 62  FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSW-------- 101
           F+RG ++   L    + IWD               +++ +LGPIYG QWR +        
Sbjct: 263 FIRGCTDGRVLKEKNIHIWDGNGTRSFLDSVGLTQNEEDDLGPIYGFQWRHFGAAYEGRD 322

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    +DQ+  ++  L+ DPY+RR I+SAWN A + KMALPPCH + QFYV NG LSC
Sbjct: 323 KDYSNQGVDQLKEVIHLLKTDPYNRRIILSAWNPADLRKMALPPCHVMSQFYVQNGYLSC 382

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT++LA + G + GEF+H++GD H+Y NH E    Q+ 
Sbjct: 383 QMYQRSADMGLGVPFNIASYSLLTILLAHITGLKPGEFVHSIGDTHVYVNHEEALLQQIE 442

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P + I     ++  + + DF L  Y PH  +  K+++
Sbjct: 443 REPRPFPTLRITKQSENIEEYTFADFELVGYNPHETLKMKMAI 485


>gi|158258677|dbj|BAF85309.1| unnamed protein product [Homo sapiens]
          Length = 313

 Score =  269 bits (688), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRS D+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSRDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|157073887|ref|NP_001096659.1| thymidylate synthase [Xenopus laevis]
 gi|120538084|gb|AAI29728.1| Ts protein [Xenopus laevis]
          Length = 309

 Score =  269 bits (688), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 132/282 (46%), Positives = 182/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD ++++++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 28  QYLDQIKYILEHGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 87

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD     E+ DK       +G+LGP+YG QWR +         
Sbjct: 88  VKGCTNSKELSAKGVKIWDANGSREFLDKQGFSTREEGDLGPVYGFQWRHFGAEYKDTHT 147

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ +WN   I  MALPPCH L QFYV + +LSCQ
Sbjct: 148 DYSGQGVDQLQHVIDTIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVVDKELSCQ 207

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E   +QL R
Sbjct: 208 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHMEPLKIQLQR 267

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           SPR  P++ I   + ++  F  +DF +  Y+PH  I  +++V
Sbjct: 268 SPRPFPKLKILRQVENIDDFTADDFLIEGYDPHPPIKMEMAV 309


>gi|332016288|gb|EGI57201.1| Thymidylate synthase [Acromyrmex echinatior]
          Length = 513

 Score =  269 bits (688), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 134/284 (47%), Positives = 180/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L+  VI+ G+ + +RT + T S FG QMRF L  G FPLLTTK+V W++V+ ELL
Sbjct: 230 YQYLRLIEKVIQSGAKKSNRTAMDTYSIFGAQMRFSLRDGVFPLLTTKQVFWRAVIEELL 289

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WF++G +N   L   G+ IWDE   +            +G+LGP+YG QWR +       
Sbjct: 290 WFIKGSTNSKELSDKGIHIWDENGSRAFLDSCDFTDREEGDLGPVYGFQWRHFGAEYKDM 349

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+  ++  ++  P  RR I+SAWN   I KMALPPCH L QFYV+NG+LS
Sbjct: 350 HTDYTGQGIDQLKEVIHKVKHSPEDRRIIISAWNPIDIPKMALPPCHTLVQFYVNNGELS 409

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH    + Q+
Sbjct: 410 TQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEKQV 469

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I   + D+  F  EDF L  Y P++ +  K++V
Sbjct: 470 KREPREFPKLRIVREVKDIDDFITEDFKLIDYNPYSKLYMKMAV 513


>gi|136609|sp|P12462|TYSY_HSVAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|331064|gb|AAA46170.1| thymidylate synthase [Ateline herpesvirus 2]
          Length = 290

 Score =  269 bits (688), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 134/283 (47%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL  ++H++  G+ + DRTGVGT S FG Q R+ L K FPLLTTK+V W+ VV ELLW
Sbjct: 8   HQYLSQVKHILNCGNFKHDRTGVGTLSVFGMQSRYSLEKDFPLLTTKRVFWRGVVEELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSWP------- 102
           F+RG ++   L   GV IWD      + DK       +G+LGP+YG QWR +        
Sbjct: 68  FIRGSTDSKELAASGVHIWDANGSRSYLDKLGLFDREEGDLGPVYGFQWRHFGAEYQGLK 127

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y G  +DQ+  I+ ++  +P  RR ++ AWNV  + KMALPPCH L QFYV +GKLSC
Sbjct: 128 HNYGGEGVDQLKQIINTIHTNPTDRRMLMCAWNVLDVPKMALPPCHVLSQFYVCDGKLSC 187

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT M+A V     GEFIHTLGD H+Y NH +    QL+
Sbjct: 188 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTDLVPGEFIHTLGDAHVYVNHVDALTEQLT 247

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P +     +  +  F+  D  L +Y P+ +I   ++V
Sbjct: 248 RTPRPFPTLKFARKVASIDDFKANDIILENYNPYPSIKMPMAV 290


>gi|332373384|gb|AEE61833.1| unknown [Dendroctonus ponderosae]
          Length = 320

 Score =  269 bits (688), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 136/284 (47%), Positives = 177/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL+ ++ +++ G    DRTGVGT S FG QMR+ L    FPLLTTK+V W++VV ELL
Sbjct: 37  HQYLNHIKLILEKGVKTADRTGVGTYSIFGAQMRYSLRDNIFPLLTTKRVFWRAVVEELL 96

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WF+RG +N   L    V IWD     E+ D       ++G+LGPIYG QWR +       
Sbjct: 97  WFIRGSTNAFELKDKNVHIWDANSTREFLDSVSLKDREEGDLGPIYGFQWRHFGAEYKGM 156

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    IDQ++ ++ ++R  P  RR I+ AWN   I +MALPPCHCL QFYV NG+LS
Sbjct: 157 RADYKNKGIDQLAHVINTIRNKPTDRRMIMCAWNPVDIPEMALPPCHCLVQFYVANGELS 216

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A +   Q GEFIH+LGD H+Y NH E    Q+
Sbjct: 217 CQLYQRSADMGLGVPFNIASYALLTYMIAHITNLQPGEFIHSLGDSHVYLNHVEPLKEQI 276

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P + I   +  +  F  EDF +  Y PH  +   ++V
Sbjct: 277 EREPRPFPTLQIKRKVETIEDFTAEDFEIVGYNPHPKLSMVMAV 320


>gi|13096424|pdb|1HW3|A Chain A, Structure Of Human Thymidylate Synthase Suggests
           Advantages Of Chemotherapy With Noncompetitive
           Inhibitors
 gi|66361120|pdb|1YPV|A Chain A, Structure Of Human Thymidylate Synthase At Low Salt
           Conditions
 gi|146387619|pdb|2ONB|A Chain A, Human Thymidylate Synthase At Low Salt Conditions With
           Pdpa Bound
          Length = 313

 Score =  269 bits (687), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPP H L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPXHALXQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|189095970|pdb|2RD8|B Chain B, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
          Length = 313

 Score =  269 bits (687), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPP H L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPXHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|290560084|pdb|3EBU|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  269 bits (687), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPP H L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPXHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|56753539|gb|AAW24972.1| SJCHGC01067 protein [Schistosoma japonicum]
          Length = 317

 Score =  269 bits (687), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 131/282 (46%), Positives = 187/282 (66%), Gaps = 21/282 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLWF 62
           YL+LL++++  G++R DRT  GT + FG Q+RF L +  +PLLTTK V ++ +V ELLWF
Sbjct: 36  YLNLLQYILAKGTERNDRTNTGTLAVFGPQLRFSLRNNEYPLLTTKTVFFRGIVEELLWF 95

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWR--------SWP 102
           +RG +N   L    V  WD     E+ D       ++G+LGPIYG QWR           
Sbjct: 96  IRGSTNSRELSEKNVHFWDANGSREFLDGLGFTEREEGDLGPIYGFQWRHSGAEYIDCRT 155

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ++ +++ +R  P+ RR ++ AWNV  + KMALPPCHCL QF+V NG+LSCQ
Sbjct: 156 DYTGQGVDQLADVIKLIRERPWDRRILIVAWNVKDLRKMALPPCHCLVQFFVANGELSCQ 215

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LGIPFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E    Q+ R
Sbjct: 216 LYQRSGDMGLGIPFNIASYALLTYMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKR 275

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   + ++  F++EDF L  Y+P+  +  K+++
Sbjct: 276 TPRPFPKLEIVREVENIDDFKFEDFKLIDYKPYPKLSMKMAL 317


>gi|194855206|ref|XP_001968495.1| GG24473 [Drosophila erecta]
 gi|190660362|gb|EDV57554.1| GG24473 [Drosophila erecta]
          Length = 304

 Score =  268 bits (686), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  ++  G  R DRT VGT S FG QMRF++ + FPLLTTK+V +++V  ELLWF
Sbjct: 22  QYLDLLSEILANGEQRMDRTEVGTLSMFGCQMRFNMRESFPLLTTKRVFFRAVAEELLWF 81

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           + G ++   L    V IWD  + ++            G+LGP+YG QWR +         
Sbjct: 82  VAGKTDAKLLQAKNVHIWDGNSSREFLDSLGLTERSVGDLGPVYGFQWRHFGAEYATCDD 141

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSC 161
           DY G  IDQ+  ++ +++ +P  RR I+SAWN   + KM LPPCHCL QF+V   G+LSC
Sbjct: 142 DYSGKGIDQLRRVIDTIKNNPSDRRIILSAWNPVDMPKMVLPPCHCLAQFFVSTRGELSC 201

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    QL 
Sbjct: 202 QLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLK 261

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P++ I   + D+  FR+EDF +  Y P+  I   ++V
Sbjct: 262 RTPRPFPKLNIKRQVQDIDDFRFEDFEIVDYNPYPKIKMDMAV 304


>gi|300172851|ref|YP_003772016.1| thymidylate synthase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887229|emb|CBL91197.1| Thymidylate synthase [Leuconostoc gasicomitatum LMG 18811]
          Length = 322

 Score =  268 bits (686), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 139/317 (43%), Positives = 183/317 (57%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + V+  G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV++  +  ELLW
Sbjct: 6   QQYLDLAKKVLDEGTQKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVYFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L +H   IWDEWA K+                                  
Sbjct: 66  FLRGDNNIRFLLQHNNHIWDEWAFKNWIESDQYTGPDMTNFGHRAQKDTAFALAYKEQKD 125

Query: 88  ----------------GELGPIYGVQWRSWPD----YDGNVIDQISSIVQSLRADPYSRR 127
                           G +G +YG  WR+W       D + IDQ+S +V+ ++ +P SRR
Sbjct: 126 IFVDKILNDDEFMETFGYVGDVYGKLWRNWETSSLTADTDTIDQVSRLVEQIKTNPDSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNAEKTPQAPLPSCHVLSQFYVADGKLSVQLYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ G+F+HT+GD H+YNNH EQ   QLSR    LP++ +NP +  L  +  +D 
Sbjct: 246 VAAQTGYEVGDFVHTIGDTHIYNNHTEQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  YE   AI A V+V
Sbjct: 306 KVLDYESEPAIKAPVAV 322


>gi|209965294|ref|YP_002298209.1| thymidylate synthase [Rhodospirillum centenum SW]
 gi|209958760|gb|ACI99396.1| thymidylate synthase [Rhodospirillum centenum SW]
          Length = 302

 Score =  268 bits (686), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 135/290 (46%), Positives = 185/290 (63%), Gaps = 28/290 (9%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLLR +++ G+ R DRTGVGT + FG QMRFDLS+GFPLLTTK++ +K+ +HELLWF
Sbjct: 13  QYLDLLRDLLERGARREDRTGVGTLALFGRQMRFDLSRGFPLLTTKRIFYKAAIHELLWF 72

Query: 63  LRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGPIY 94
           L GD+ +  L ++GV IW +W                            A + G+LGP+Y
Sbjct: 73  LSGDTRLRPLLQNGVRIWTDWPLARYRRETGESIDQETFERRVLEDDAFAARWGDLGPVY 132

Query: 95  GVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154
           G QWR+W   DG V+DQI+ +V  +R +P SRR + + WNV  +++MALPPCH  +Q++V
Sbjct: 133 GKQWRAWETADGRVVDQIAQLVDGIRGNPTSRRLLFTGWNVGELERMALPPCHMTYQYFV 192

Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
            +G+LS  LYQRS D  LG+P+N+   +LL  MLA     + GE + T  DVHLY NH E
Sbjct: 193 ADGRLSGILYQRSADTLLGLPWNLCEAALLIHMLAQQCDLEPGELVWTGADVHLYLNHVE 252

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QA  QL R PR LP+++I      L  +R+EDF +  Y+PH  I A+V+V
Sbjct: 253 QARQQLGREPRPLPRLVIRRRPESLFGYRFEDFAIEGYDPHPHIRAEVAV 302


>gi|85690907|ref|XP_965853.1| thymidylate synthase [Encephalitozoon cuniculi GB-M1]
 gi|85691163|ref|XP_965981.1| thymidylate synthase [Encephalitozoon cuniculi GB-M1]
 gi|51704239|sp|O62584|TYS1_ENCCU RecName: Full=Thymidylate synthase 1/2; Short=TS 1/2; Short=TSase
           1/2
 gi|266618852|pdb|3KGB|A Chain A, Crystal Structure Of Thymidylate Synthase 12 FROM
           Encephalitozoon Cuniculi At 2.2 A Resolution
 gi|19068420|emb|CAD24888.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1]
 gi|19068548|emb|CAD25016.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1]
          Length = 294

 Score =  268 bits (685), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 139/285 (48%), Positives = 188/285 (65%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDL++H+++ G+ R DRTG GT S FG  MRF L    FPLLTT++V ++ VV ELL
Sbjct: 10  HQYLDLVKHILENGARRMDRTGTGTLSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWR--------SW 101
           +FLRG+++   L + GV IW++   K           +G+LGPIYG QWR        S 
Sbjct: 70  FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             Y+G  +DQI+S + ++RA+P SRR +VSAWN   +  MALPPCH LFQF V +GKLSC
Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H +    Q+ 
Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQIQ 249

Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P++ ++P     +   F+YEDF L  Y+PH AI   +S 
Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMSA 294


>gi|145535888|ref|XP_001453677.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|2833339|sp|Q27828|DRTS_PARTE RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|434592|gb|AAC47025.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
 gi|124421399|emb|CAK86280.1| unnamed protein product [Paramecium tetraurelia]
          Length = 462

 Score =  268 bits (685), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 138/283 (48%), Positives = 176/283 (62%), Gaps = 21/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLD++  ++K G  + DRTGVGT S FG  MRF+L++ FPLLTTKKV ++ VV ELLW
Sbjct: 181 NQYLDMITKIMKEGVSKDDRTGVGTMSIFGQTMRFNLAQSFPLLTTKKVFFRGVVEELLW 240

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101
           FLRG++N   L   GV IW+     E+ D  G       +LGP+YG QWR +        
Sbjct: 241 FLRGNTNGKLLLDKGVKIWEGNGTREYLDTIGLQHRQEHDLGPVYGFQWRHFGAKYKDCQ 300

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    +DQ+  I+Q L+ +P SRR I+SAWN   + +MALPPCH + QF+V NGKLSC
Sbjct: 301 TDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMALPPCHVMSQFFVANGKLSC 360

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D  LGIPFNIASY+LLT MLA       GEF+H LGD H+Y+NH E    Q+ 
Sbjct: 361 MMYQRSCDFGLGIPFNIASYALLTYMLAKECNLNLGEFVHVLGDTHIYSNHVEALKKQIE 420

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + I  N   L  + YEDF L  Y  H  I  K++V
Sbjct: 421 RVPYPFPLLKIKGN-KSLFDYTYEDFELVGYNAHDKIEMKMAV 462


>gi|30690081|ref|NP_195183.2| THY-2 (thymidylate synthase 2); dihydrofolate reductase/
           thymidylate synthase [Arabidopsis thaliana]
 gi|150421542|sp|Q05763|DRTS2_ARATH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase 2; Short=DHFR-TS 2; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|110743754|dbj|BAE99713.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
 gi|332660994|gb|AEE86394.1| thymidylate synthase [Arabidopsis thaliana]
          Length = 565

 Score =  268 bits (684), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 131/281 (46%), Positives = 174/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L++ +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 285 YLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 344

Query: 64  RGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD  A +            +G+LGP+YG QWR +         D
Sbjct: 345 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 404

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 405 YTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 464

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT +LA V     G+FIH +GD H+Y NH      QL   
Sbjct: 465 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 524

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   D+ SF  +DF L  Y+PH  I  K++V
Sbjct: 525 PKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 565


>gi|19173335|ref|NP_597138.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1]
 gi|51702027|sp|Q8SRG2|TYS3_ENCCU RecName: Full=Thymidylate synthase 3; Short=TS 3; Short=TSase 3
 gi|19170924|emb|CAD26314.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1]
          Length = 294

 Score =  268 bits (684), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 139/285 (48%), Positives = 188/285 (65%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDL++H+++ G+ R DRTG GT S FG  MRF L    FPLLTT++V ++ VV ELL
Sbjct: 10  HQYLDLVKHILENGARRMDRTGTGTLSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWR--------SW 101
           +FLRG+++   L + GV IW++   K           +G+LGPIYG QWR        S 
Sbjct: 70  FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             Y+G  +DQI+S + ++RA+P SRR +VSAWN   +  MALPPCH LFQF V +GKLSC
Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H +    Q+ 
Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQVQ 249

Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P++ ++P     +   F+YEDF L  Y+PH AI   +S 
Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMSA 294


>gi|256075176|ref|XP_002573896.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Schistosoma mansoni]
 gi|238659087|emb|CAZ30129.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Schistosoma mansoni]
          Length = 577

 Score =  268 bits (684), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 132/282 (46%), Positives = 184/282 (65%), Gaps = 21/282 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLWF 62
           YL+LLR+++  G +RRDRT  GT   FG Q+RF L +  +PLLTTK V ++ +V ELLWF
Sbjct: 296 YLNLLRYILANGVERRDRTDTGTFGVFGPQLRFSLRNHEYPLLTTKTVFFRGIVEELLWF 355

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWR--------SWP 102
           +RG +N   L    V  WD     E+ D       ++G+LGP+YG QWR           
Sbjct: 356 IRGSTNSRELAEKNVHFWDANGSREFLDGLGFTEREEGDLGPVYGFQWRHSGAEYVDCQT 415

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ++ +++ +R  P+ RR ++ AWNV  + KMALPPCHCL QFYV N +LSCQ
Sbjct: 416 DYTGQGVDQLADVIKLIRERPWDRRIMIVAWNVKDLRKMALPPCHCLVQFYVANDELSCQ 475

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E    Q+ R
Sbjct: 476 LYQRSGDMGLGVPFNIASYALLTCMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKR 535

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   + ++  F++EDF L  Y+P+  I  K+++
Sbjct: 536 VPRPFPKLEIIREVKNIDDFKFEDFKLIDYKPYPKIPMKMAL 577


>gi|289195|gb|AAA32789.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
 gi|3096926|emb|CAA18836.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
 gi|7270407|emb|CAB80174.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
 gi|27808622|gb|AAO24591.1| At4g34570 [Arabidopsis thaliana]
          Length = 518

 Score =  268 bits (684), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 131/281 (46%), Positives = 174/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L++ +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 238 YLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 297

Query: 64  RGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD  A +            +G+LGP+YG QWR +         D
Sbjct: 298 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 357

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 358 YTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 417

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT +LA V     G+FIH +GD H+Y NH      QL   
Sbjct: 418 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 477

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   D+ SF  +DF L  Y+PH  I  K++V
Sbjct: 478 PKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 518


>gi|164564740|dbj|BAF98221.1| CM0216.390.nc [Lotus japonicus]
          Length = 528

 Score =  268 bits (684), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 133/283 (46%), Positives = 177/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL L++ +I  G+ + DRTG GT S FG QMRF+L + FPLLTTKKV W+ VV ELLW
Sbjct: 246 YKYLRLVQEIISEGTVKDDRTGTGTLSKFGCQMRFNLRRSFPLLTTKKVFWRGVVEELLW 305

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+ G ++   L   G+ IWD     E+ D       ++G+LGP+YG QWR +        
Sbjct: 306 FISGSTSAKVLQEKGIHIWDGNASREYLDSIGLTEREEGDLGPVYGFQWRHFGARYTNMH 365

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV NG+LSC
Sbjct: 366 DDYSGKGFDQLLDVINKIKHNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSC 425

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT M+A V     G+FIH +GD H+Y NH +    QL 
Sbjct: 426 QMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVKPLQEQLQ 485

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             PR  P + INP   D+ SF   DF L  Y+PH  I  K++V
Sbjct: 486 NLPRPFPILKINPKKKDIDSFEATDFKLIGYDPHQKIQMKMAV 528


>gi|307195505|gb|EFN77391.1| Thymidylate synthase [Harpegnathos saltator]
          Length = 302

 Score =  268 bits (684), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 136/284 (47%), Positives = 181/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L+  VIK G+ + +RTGV T S FG Q+RF L  G FPLLTTK+V WK+VV ELL
Sbjct: 19  YQYLRLIEKVIKSGTRKGNRTGVDTYSIFGTQLRFGLRDGVFPLLTTKRVFWKAVVEELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----------WADKD-GELGPIYGVQWRSW------- 101
           WF++G +N   L   G+ IWD+           ++D++ G+LGP+YG QWR +       
Sbjct: 79  WFIKGSTNSKELADKGIHIWDKNGSRAFLDSCGFSDREEGDLGPVYGFQWRHYGAEYKDM 138

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+  ++  ++  P  RR I+SAWN   I KMALPPCH   QFYV NG+LS
Sbjct: 139 HTDYAGQGIDQLKEVIHKIKHSPDDRRIIMSAWNPTDIPKMALPPCHNFIQFYVSNGELS 198

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            QLYQRS D+ LG+PFNIASYSLL  ++A V G + GEF+HT+GD H+Y NH    + Q+
Sbjct: 199 AQLYQRSADMGLGVPFNIASYSLLIYIIAHVTGLKPGEFVHTMGDCHVYINHVSALEEQI 258

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I   I D+  F  EDF L  Y PH+ +  +++V
Sbjct: 259 QRKPRNFPKLKIIREIKDIDDFVAEDFELIDYNPHSKLYMEMAV 302


>gi|301774490|ref|XP_002922670.1| PREDICTED: thymidylate synthase-like [Ailuropoda melanoleuca]
          Length = 324

 Score =  267 bits (683), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 128/275 (46%), Positives = 171/275 (62%), Gaps = 20/275 (7%)

Query: 10  HVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNV 69
           H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF++G +N 
Sbjct: 50  HILRCGVRKDDRTGTGTLSVFGLQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNA 109

Query: 70  SYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PDYDGNVI 109
             L   GV IWD    +D            G+LGP+YG QWR +         DY G  I
Sbjct: 110 KELSSKGVKIWDANGSRDFLDSLGFCSREEGDLGPVYGFQWRHFGAEYKDMDSDYSGQGI 169

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++ +++ +P  RR I+  WN   +  MALPPCH L QFYV NG+LSCQLYQRSGD
Sbjct: 170 DQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSGD 229

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R PR  P+
Sbjct: 230 MGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKMQLQREPRPFPK 289

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 290 LKILRKVETIDDFKAEDFQIEGYCPHPTIKMEMAV 324


>gi|195446571|ref|XP_002070828.1| GK18710 [Drosophila willistoni]
 gi|194166913|gb|EDW81814.1| GK18710 [Drosophila willistoni]
          Length = 354

 Score =  267 bits (683), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 128/281 (45%), Positives = 179/281 (63%), Gaps = 22/281 (7%)

Query: 6   DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRG 65
           DLLR +I+ G  R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V  ELLWF++G
Sbjct: 74  DLLRSIIERGETRIDRTRVGTLSIFGSQMRFDMRESFPLLTTKRVFFRAVAEELLWFIKG 133

Query: 66  DSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PDYD 105
            ++   L    V IWD  + ++            G+LGP+YG QWR +         DY 
Sbjct: 134 KTDAKILQDKNVHIWDGNSTREFLDNLGFTDRAVGDLGPVYGFQWRHFGAEYRTCQDDYT 193

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--LSCQL 163
           G  +DQ+  ++++++ +P  RR I+SAWN   + KMALPPCHCL QFYV   +  LSCQL
Sbjct: 194 GQGVDQLRQVIETIKTNPSDRRIIMSAWNPLDLPKMALPPCHCLAQFYVSQSRNELSCQL 253

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y +H E    QL R+
Sbjct: 254 YQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLSHVEPIKEQLKRT 313

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR  P++     + D+  F YED  + +Y P+  I  +++V
Sbjct: 314 PRPFPKLAFKRQVTDIEDFTYEDIEIVNYNPYPKIQMEMAV 354


>gi|168012488|ref|XP_001758934.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690071|gb|EDQ76440.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 520

 Score =  267 bits (683), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 135/277 (48%), Positives = 173/277 (62%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L+  +IK G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW
Sbjct: 238 YQYLNLIDDIIKTGAVKGDRTGTGTISKFGCQMRFNLRKSFPLLTTKRVFWRGVVEELLW 297

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ G +N   LH  GV IWD     E+ DK       +G+LGP+YG QWR +        
Sbjct: 298 FISGSTNAKVLHDKGVKIWDGNGSREYLDKQGLTEREEGDLGPVYGFQWRHFGAKYVDMH 357

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ DP  RR ++SAWN A +  MALPPCH   QFYV NG+LSC
Sbjct: 358 ADYTGQGYDQLKDVINKIKTDPDDRRILLSAWNPADLKLMALPPCHMFAQFYVANGELSC 417

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT +LA V     G+F+H LGD H+Y NH E    QL 
Sbjct: 418 QMYQRSCDMGLGVPFNIASYALLTCILAHVCDLVPGDFVHVLGDAHVYKNHVEPLQEQLQ 477

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
            +P   P++ I     D+ SF   DF L  Y+ H  I
Sbjct: 478 NTPMPFPRLRIKTANRDIDSFVAADFELIGYKAHQKI 514


>gi|50365237|ref|YP_053662.1| thymidylate synthase [Mesoplasma florum L1]
 gi|62901302|sp|Q6F145|TYSY_MESFL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|50363793|gb|AAT75778.1| thymidylate synthase [Mesoplasma florum L1]
          Length = 288

 Score =  267 bits (683), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 134/294 (45%), Positives = 180/294 (61%), Gaps = 36/294 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+  ++K G  R DRT  GT S FG Q R+DL +GFPLLTTKKV +K++ HE+L
Sbjct: 1   MKQYLELVNEILKDGEKREDRTNTGTISKFGVQKRYDLREGFPLLTTKKVFYKAIFHEML 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL  + V IW+EW                              +K G+LG
Sbjct: 61  WFIKGDTNIKYLVENNVKIWNEWPYENFKKSSEFNNETLQEFVERLKNDNEFCNKWGDLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR   D+ G  IDQ + ++  ++ +P+SRRHIVSAWN A +D M LPPCH  +Q
Sbjct: 121 PVYGKQWR---DFGG--IDQFAKLINDIKKNPFSRRHIVSAWNPAEVDNMLLPPCHSFWQ 175

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
            YV  +G L  QLYQRSGDVFLG+PFNIASY+LL  ++A     +   F+HT+GD H+Y 
Sbjct: 176 VYVSKDGWLDLQLYQRSGDVFLGVPFNIASYALLMELIAKECNLKARYFVHTIGDAHIYL 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH EQ + QL R P  L ++ IN     +    +ED  +  YE HA I  +V+V
Sbjct: 236 NHLEQINEQLKRKPLPLCKIKINSE-KSIFDIAFEDIEIEGYESHAKITGEVAV 288


>gi|281350922|gb|EFB26506.1| hypothetical protein PANDA_011650 [Ailuropoda melanoleuca]
          Length = 276

 Score =  267 bits (683), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 128/276 (46%), Positives = 171/276 (61%), Gaps = 20/276 (7%)

Query: 9   RHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN 68
            H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF++G +N
Sbjct: 1   EHILRCGVRKDDRTGTGTLSVFGLQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTN 60

Query: 69  VSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PDYDGNV 108
              L   GV IWD    +D            G+LGP+YG QWR +         DY G  
Sbjct: 61  AKELSSKGVKIWDANGSRDFLDSLGFCSREEGDLGPVYGFQWRHFGAEYKDMDSDYSGQG 120

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           IDQ+  ++ +++ +P  RR I+  WN   +  MALPPCH L QFYV NG+LSCQLYQRSG
Sbjct: 121 IDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSG 180

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R PR  P
Sbjct: 181 DMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKMQLQREPRPFP 240

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           ++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 241 KLKILRKVETIDDFKAEDFQIEGYCPHPTIKMEMAV 276


>gi|256032568|pdb|3EGY|X Chain X, Crystal Structure Of Human Thymidyalte Synthase A191k With
           Loop 181-197 Stabilized In The Inactive Conformation
          Length = 313

 Score =  267 bits (683), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 129/282 (45%), Positives = 174/282 (61%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  M LPP H L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMKLPPXHALXQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|307166222|gb|EFN60452.1| Thymidylate synthase [Camponotus floridanus]
          Length = 298

 Score =  267 bits (683), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 135/284 (47%), Positives = 179/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L+  VI+ G+ R +RTGV T S FG Q+RF L  G FPLLTTK+V W++VV ELL
Sbjct: 15  YQYLRLVEKVIRTGAKRNNRTGVDTYSIFGTQIRFSLRDGVFPLLTTKRVFWRAVVEELL 74

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WF++G +N   L   GV IWDE   +            +G+LGP+YG QWR +       
Sbjct: 75  WFIKGSTNSKELSDKGVHIWDENGSRAFLDSCGFTDREEGDLGPVYGFQWRHFGAEYKDI 134

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+  ++  ++  P  RR I+S WN   I +MALPPCH L QFYV+NG+LS
Sbjct: 135 RTDYTGQGIDQLKEVIHKIKHCPDDRRIIMSNWNPVDIPEMALPPCHVLVQFYVNNGELS 194

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH    + Q+
Sbjct: 195 AQLYQRSADIGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEEQI 254

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I   I ++  F  ED  L  Y+P+  +  K++V
Sbjct: 255 KREPREFPKLRIVREIKNIDDFVAEDLELIDYKPYPKLYMKMAV 298


>gi|317420036|emb|CBN82072.1| Thymidylate synthase [Dicentrarchus labrax]
          Length = 325

 Score =  267 bits (682), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/281 (45%), Positives = 175/281 (62%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLD + ++++ G  + DRTG G  S FG Q R++L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 45  YLDQIEYIMEHGRRKGDRTGTGVVSVFGTQARYNLRDQFPLLTTKRVFWKGILEELLWFI 104

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103
           +G +N   L   GV IWD    +D            G+LGP+YG QWR +         D
Sbjct: 105 KGSTNAKELSAKGVKIWDANGSRDFLDNLGFTDREEGDLGPVYGFQWRHFGAEYTNMHAD 164

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV + +LSCQL
Sbjct: 165 YTGQGVDQLQKVIDTIKKNPEDRRIIMCAWNPKDMPNMALPPCHALCQFYVCDSELSCQL 224

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R 
Sbjct: 225 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYINHIEPLKVQLQRE 284

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R  P++ I   +  +  FR EDF +  Y PH AI  +++V
Sbjct: 285 IRPFPKLKILRKVESIDDFRAEDFEICDYNPHPAIKMQMAV 325


>gi|159484697|ref|XP_001700389.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158272276|gb|EDO98078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 478

 Score =  267 bits (682), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 131/283 (46%), Positives = 176/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L+R +I  G  R DRTG GT S FG   R++L   FPLLT+K+V WK V  ELLW
Sbjct: 196 QQYLELVRELITSGVFRPDRTGTGTYSRFGRTSRYNLRHTFPLLTSKRVFWKGVAEELLW 255

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+ G +N + L    + IWD  + ++            G+LGP+YG QWR +        
Sbjct: 256 FISGATNANLLRDKNIHIWDGNSSREFLDGRGLGHREVGDLGPVYGFQWRHFGAEYKDMH 315

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  I+ +L+ DP  RR ++SAWN A + +MALPPCH   QFYV +G+LSC
Sbjct: 316 TDYTGKGVDQLRYIIDTLKKDPNDRRMVMSAWNPAALAEMALPPCHMFCQFYVADGELSC 375

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS DV LG+PFNIASY+LLT ++A V G + GE +H +GD H+Y NH E    QL 
Sbjct: 376 LMYQRSCDVGLGVPFNIASYALLTRLVAQVTGLRAGELVHVMGDTHVYANHVEPLREQLK 435

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +PR  P + INP+  D+ SF +EDF L  Y PH  I  +++V
Sbjct: 436 NTPRHFPTLRINPDKKDIDSFVFEDFELVDYNPHKTIKMQMAV 478


>gi|31790281|gb|AAP57962.1| dihydrofolate reductase/thymidilate synthase [Babesia bovis]
          Length = 511

 Score =  267 bits (682), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 131/281 (46%), Positives = 179/281 (63%), Gaps = 20/281 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+L  V+  G  + +RTG    S FGYQMRFDLS+ FPLLTTKKV  +S++ ELLWF
Sbjct: 230 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 289

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++G +N + L    V IW+     E+ DK+G       +LGPIYG QWR +         
Sbjct: 290 IKGSTNGNDLLAKNVRIWELNGRREFLDKNGFTEREEHDLGPIYGFQWRHFGAEYLDMHA 349

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  IDQ++ I+  ++ +P  RR IV +WNV+ + KMALPPCHC FQFYV + KLSC 
Sbjct: 350 DYTGKGIDQLAEIINRIKTNPNDRRMIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 409

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYS+LT M+A V G   GEF+H L D H+Y +H +    Q++R
Sbjct: 410 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 469

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            P   P++ +NP+I ++  F  +D  +  Y  H AI   +S
Sbjct: 470 IPYPFPRLRLNPDIKNIEDFTIDDIVVEDYVSHPAIPMAMS 510


>gi|209878892|ref|XP_002140887.1| thymidylate synthase family protein [Cryptosporidium muris RN66]
 gi|209556493|gb|EEA06538.1| thymidylate synthase family protein [Cryptosporidium muris RN66]
          Length = 549

 Score =  267 bits (682), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 133/283 (46%), Positives = 185/283 (65%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+L +V++ G  R +RTG+ T S FG  MRFDL + FPLLTTK V  + +  EL+WF
Sbjct: 267 QYLDMLSNVLQNGHYRENRTGINTYSIFGASMRFDLRESFPLLTTKNVALRIIFEELMWF 326

Query: 63  LRGDSNVSYLHRHGVSIW-----DEWADKDG-------ELGPIYGVQWRSW--------P 102
           ++GD+N ++L    V IW      E+ +K G       +LGPIYG QWR +         
Sbjct: 327 IKGDTNGNHLLDKKVFIWAGNGSKEYLNKVGLGYREENDLGPIYGFQWRHFNAEYKTMHD 386

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-KLSC 161
           +Y+G  +DQ++++++SL+ +PY RRHI+SAWN + +  MALPPCH L QFYVDN  +LSC
Sbjct: 387 NYNGQGVDQLANLIESLKKNPYDRRHILSAWNPSAVKYMALPPCHILSQFYVDNNNRLSC 446

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASYSLL +M+A + G++ GEFIH +GDVH+Y NH EQ   Q+ 
Sbjct: 447 SLYQRSCDLGLGCPFNIASYSLLCVMIAHICGYEPGEFIHFIGDVHIYENHVEQLKQQIK 506

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  PQ+ +   +  +  F +ED  +  Y PH  I  +++V
Sbjct: 507 RLPRPFPQLRLKRKVDKVEDFIWEDIEIIGYYPHPTIRMEMAV 549


>gi|301111324|ref|XP_002904741.1| bifunctional dihydrofolate reductase-thymidylate synthase 2
           [Phytophthora infestans T30-4]
 gi|262095071|gb|EEY53123.1| bifunctional dihydrofolate reductase-thymidylate synthase 2
           [Phytophthora infestans T30-4]
          Length = 509

 Score =  266 bits (681), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 132/284 (46%), Positives = 178/284 (62%), Gaps = 23/284 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL+R ++  G+ R DRTG GT S FG QMRF L    FPLLTTK+V W+ V  ELLW
Sbjct: 208 QYLDLIRKILTQGAKREDRTGTGTLSVFGAQMRFSLRNNVFPLLTTKRVFWRGVAEELLW 267

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+ GD++   L +  + IWD    ++            G+LGP+YG QWR +        
Sbjct: 268 FISGDTSAHTLQQKDIHIWDGNGSREYLDSRGLQHREVGDLGPVYGFQWRHFGAKYTDMH 327

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  LR +P  RR ++SAWN + +++MALPPCH   QFYV NG+LSC
Sbjct: 328 ADYTGKGVDQLAEVIHKLRTNPTDRRIVLSAWNPSDLNEMALPPCHMFCQFYVANGELSC 387

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT ++A V G + GEFIH +GD H+Y NH E    QL+
Sbjct: 388 QMYQRSADMGLGVPFNIASYALLTRLVAQVTGLKPGEFIHVIGDAHVYLNHVEPLQKQLT 447

Query: 222 RSPRTLPQMIINPNIVDLL-SFRYEDFT-LRSYEPHAAILAKVS 263
           R+P   P + INP     +  F +EDF  +  Y   A +L K+S
Sbjct: 448 RTPCPFPTLHINPEKTSSIDEFTFEDFEWVSDYAGSAIVLCKLS 491


>gi|3097066|emb|CAA06648.1| thymidylate synthase [Encephalitozoon cuniculi]
          Length = 294

 Score =  266 bits (680), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/285 (48%), Positives = 187/285 (65%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDL++H+++ G+ R DRTG G  S FG  MRF L    FPLLTT++V ++ VV ELL
Sbjct: 10  HQYLDLVKHILENGARRMDRTGTGALSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWR--------SW 101
           +FLRG+++   L + GV IW++   K           +G+LGPIYG QWR        S 
Sbjct: 70  FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             Y+G  +DQI+S + ++RA+P SRR +VSAWN   +  MALPPCH LFQF V +GKLSC
Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H +    Q+ 
Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQIQ 249

Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P++ ++P     +   F+YEDF L  Y+PH AI   +S 
Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMSA 294


>gi|306921962|dbj|BAJ17638.1| dihydrofolate reductase [Neospora caninum]
          Length = 612

 Score =  266 bits (679), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 134/285 (47%), Positives = 178/285 (62%), Gaps = 23/285 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL+  +I  G+   DRTGVG  S FG  MRF L K FPLLTTK+V WK V+ ELLWF
Sbjct: 328 QYLDLIADIINNGATMDDRTGVGVISKFGCTMRFSLDKAFPLLTTKRVFWKGVLEELLWF 387

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           +RGD+N ++L   GV IWD+   ++            G++GP YG QWR +         
Sbjct: 388 IRGDTNANHLSEKGVKIWDKNVTREFLDSRNLSHREVGDIGPGYGFQWRHFGATYKDMHT 447

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ+  ++  LR +P  RR +++AWN A +D+MALPPCH L QFYV+N + LSC
Sbjct: 448 DYTGQGVDQLKKVINMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVENDRDLSC 507

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS DV LG+PFNIASYSLLT+M+A V   +  EFIH +G+ H+Y+NH E    QL 
Sbjct: 508 VMYQRSCDVGLGVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYSNHVEALKEQLR 567

Query: 222 RSPRTLP--QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P   ++    I ++  F  EDF +  Y PH  I  +++V
Sbjct: 568 REPRPFPIVNILNKERIQEIDDFTAEDFEVVGYVPHGRIQMEMAV 612


>gi|290972164|ref|XP_002668828.1| predicted protein [Naegleria gruberi]
 gi|284082356|gb|EFC36084.1| predicted protein [Naegleria gruberi]
          Length = 535

 Score =  265 bits (678), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 130/286 (45%), Positives = 184/286 (64%), Gaps = 24/286 (8%)

Query: 3   QYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           QYLD+++ +I    + R +RTGVGT S FGYQM++ L    FPLLTTK+V WK V  EL 
Sbjct: 250 QYLDIIKELILSDINVREERTGVGTVSKFGYQMKYSLRNNVFPLLTTKRVFWKGVAKELF 309

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WF+ G +N   L    + IWD     E+ D  G       +LGP+YG QWR W       
Sbjct: 310 WFISGSTNAKILSEQDIHIWDGNGSREYLDSLGFENREEMDLGPVYGFQWRHWGSSYENM 369

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158
             DY    +DQ+   +++L+ +P +RR I+SAWNV+ +  MALPPCH + QF+VD    +
Sbjct: 370 HTDYTNKGVDQLKKCIETLKNNPTNRRIILSAWNVSDLPNMALPPCHLMCQFWVDTDTNE 429

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQ+YQRS D+ LG+PFNIASY+LLT ++A V   + G+FIHTLGD H+Y NH E    
Sbjct: 430 LSCQMYQRSCDMGLGVPFNIASYALLTRLMAQVCNLKPGDFIHTLGDTHVYKNHIEPLKK 489

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Q+ R P+  P ++++P+I ++  F++E  TL++YEPHA I  +++V
Sbjct: 490 QIERDPKHFPLLLLDPSITNIDDFKFEHLTLQNYEPHATIKMEMAV 535


>gi|170017673|ref|YP_001728592.1| thymidylate synthase [Leuconostoc citreum KM20]
 gi|169804530|gb|ACA83148.1| Thymidylate synthase [Leuconostoc citreum KM20]
          Length = 319

 Score =  264 bits (675), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 139/314 (44%), Positives = 179/314 (57%), Gaps = 51/314 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + ++  G  + DRTG GT S FG QMRF+L +GFPLLTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAQKILDEGHLKGDRTGTGTHSLFGSQMRFNLQEGFPLLTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 66  FLRGDNNIRFLLQHNNHIWDEWAFKNWVSSEEYSGPDMTNFSHRAQEDADFAAAYQAQKA 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDG-NVIDQISSIVQSLRADPYSRRHIV 130
                        +K G +G +YG  WR W    G N IDQ++ +V  ++A P SRR I+
Sbjct: 126 IFVDNILNDDDFMEKFGYIGDVYGKLWRGWETISGENAIDQVNRLVNQIKATPDSRRLIL 185

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           +AWN     +  LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL  M+A+
Sbjct: 186 TAWNAETTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHMVAA 245

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G++ G+FIHT+GD H+YNNH EQ   QLSR    LP++ +NP +  L  +  +D  + 
Sbjct: 246 QTGYEVGDFIHTIGDTHIYNNHIEQITEQLSRPMHHLPKLWLNPEVKSLFDYTMDDIKVL 305

Query: 251 SYEPHAAILAKVSV 264
            YE   AI A V+V
Sbjct: 306 DYESEPAIKAPVAV 319


>gi|1706522|sp|P51820|DRTS_SOYBN RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|999190|gb|AAB34317.1| dihydrofolate reductase-thymidylate synthase [Glycine max]
 gi|1096144|prf||2111237A dihydrofolate reductase-thymidylate synthase
          Length = 530

 Score =  264 bits (675), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 134/281 (47%), Positives = 172/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L++ +I  G+ + DRTG GT S FG QMRF+L   FPLLTTKKV W+ VV ELLWF+
Sbjct: 250 YLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVEELLWFI 309

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD     E+ D       ++G+LGP+YG QWR +         D
Sbjct: 310 SGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFGARYTDMHHD 369

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN   +  MALPPCH   QFYV +G+LSCQ+
Sbjct: 370 YSGQGFDQLLDVINKIKRNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVAHGELSCQM 429

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LGIPFNIASY+LLT M+A V     G+FIH +GD H+Y NH      QL   
Sbjct: 430 YQRSADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPLQEQLHNQ 489

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   D+ SF   DF L  Y+PH  I  K+SV
Sbjct: 490 PKPFPTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLSV 530


>gi|17158171|ref|NP_477589.1| wsv067 [Shrimp white spot syndrome virus]
 gi|15021446|gb|AAK77723.1|AF369029_54 ORF54, putative thymidylate synthase [shrimp white spot syndrome
           virus]
 gi|17016465|gb|AAL33071.1| wsv067 [shrimp white spot syndrome virus]
          Length = 289

 Score =  264 bits (674), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 21/279 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60
           HQYL+L+R +++ G  + DRTG GT S FG QMRF L     P+LTTKK+ W+ VV ELL
Sbjct: 5   HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELL 64

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------- 101
           WF+RG+++   L +  + IW+     E+ D        +G+LGP+YG QWR +       
Sbjct: 65  WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGFQWRHFGAEYDTC 124

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+++I+++LR +P  RR I++AWN   +  MALPPCH   QFYV NG+LS
Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGDV LG+PFNIASYSLLT ++AS++G + GEFI TLGD H+YN H E    QL
Sbjct: 185 CQLYQRSGDVGLGVPFNIASYSLLTHLMASMVGLKPGEFILTLGDAHIYNTHIEVLKKQL 244

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
            R PR  P++ I      +  F  + F L  Y+PH+  L
Sbjct: 245 CRVPRPFPKLRILMAPEKIEDFTIDMFYLEGYQPHSGNL 283


>gi|289466115|gb|ADC94828.1| dihydrofolate reductase-thymidylate synthase [Plasmodium billbrayi]
          Length = 608

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIIMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 445

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAEFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602


>gi|156084246|ref|XP_001609606.1| dihydrofolate reductase/thymidilate synthase [Babesia bovis]
 gi|256032857|pdb|3I3R|A Chain A, X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE
           SYNTHASE From Babesia Bovis At 2.35a Resolution
 gi|256032858|pdb|3I3R|B Chain B, X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE
           SYNTHASE From Babesia Bovis At 2.35a Resolution
 gi|261278903|pdb|3K2H|A Chain A, Co-Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE
           Synthase From Babesia Bovis With Dump, Pemetrexed And
           Nadp
 gi|261278904|pdb|3K2H|B Chain B, Co-Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE
           Synthase From Babesia Bovis With Dump, Pemetrexed And
           Nadp
 gi|268612472|pdb|3KJR|A Chain A, Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE
           SYN Babesia Bovis Determined Using Slipchip Based
           Microfluidics
 gi|268612473|pdb|3KJR|B Chain B, Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE
           SYN Babesia Bovis Determined Using Slipchip Based
           Microfluidics
 gi|154796858|gb|EDO06038.1| dihydrofolate reductase/thymidylate synthase [Babesia bovis]
          Length = 511

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 129/282 (45%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+L  V+  G  + +RTG    S FGYQMRFDLS+ FPLLTTKKV  +S++ ELLWF
Sbjct: 230 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 289

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++G +N + L    V IW+     ++ DK+G       +LGPIYG QWR +         
Sbjct: 290 IKGSTNGNDLLAKNVRIWELNGRRDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHA 349

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  IDQ++ I+  ++ +P  RR IV +WNV+ + KMALPPCHC FQFYV + KLSC 
Sbjct: 350 DYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 409

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYS+LT M+A V G   GEF+H L D H+Y +H +    Q++R
Sbjct: 410 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 469

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P   P++ +NP+I ++  F  +D  +  Y  H  I   +S 
Sbjct: 470 IPHPFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMSA 511


>gi|84501616|ref|ZP_00999788.1| Thymidylate synthase [Oceanicola batsensis HTCC2597]
 gi|84390237|gb|EAQ02796.1| Thymidylate synthase [Oceanicola batsensis HTCC2597]
          Length = 298

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 135/293 (46%), Positives = 180/293 (61%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLDLL  V++ G +R DRTGVGTRS FG  +RFDLS+   P+LTTK+V+WK+ V E+L
Sbjct: 6   YQYLDLLSQVLENGDERTDRTGVGTRSIFGAMVRFDLSEDTVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L R  V IW +W                            A + GELGP
Sbjct: 66  WFLTGGTNIQPLLRENVRIWTDWPLATYRRETGEDIGQDVFEQRILEDDAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +V++LR +P SRR +   WNVA +  MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWLGSDGKEHDQIADLVRTLRENPASRRMLFHGWNVAELGGMALPPCHMVYQY 185

Query: 153 YVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+C L+QRS D+ LG PFN    + L +MLA   G + GE +   GDVHLY N
Sbjct: 186 HVTTDGRLNCLLFQRSADLLLGAPFNYVGATSLQLMLAQQAGLRPGELVWVGGDVHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q+SR PR LP+M +      +  +R EDF +  Y PHAAI A+V+V
Sbjct: 246 HLDQAREQMSREPRPLPRMRLLRQAESIDGYRIEDFEVEGYAPHAAIRAEVAV 298


>gi|296111709|ref|YP_003622091.1| thymidylate synthase [Leuconostoc kimchii IMSNU 11154]
 gi|295833241|gb|ADG41122.1| thymidylate synthase [Leuconostoc kimchii IMSNU 11154]
          Length = 322

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 138/317 (43%), Positives = 181/317 (57%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + V+  G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV++  +  ELLW
Sbjct: 6   QQYLDLAQKVLNEGALKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVYFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L +H   IWDEWA K+                                  
Sbjct: 66  FLRGDNNIRFLLQHNNHIWDEWAFKNWVESDQYTGPDMTNFGHRAIEDPEFAATYKIQKD 125

Query: 88  ----------------GELGPIYGVQWRSWP----DYDGNVIDQISSIVQSLRADPYSRR 127
                           G +G +YG  WR+W     + D   IDQ+S +V  ++  P SRR
Sbjct: 126 IFVDKILNDDDFMATFGYVGDVYGKLWRNWETTSLNADEGTIDQVSRLVHDIKTTPDSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSVQLYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ G+F+HT+GD H+YNNH +Q   QLSR    LP++ +NP +  L  +  +D 
Sbjct: 246 VAAQTGYEVGDFVHTIGDTHIYNNHVDQITEQLSRPMHQLPKIWLNPEVKSLFDYTMDDI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  YE   AI A V+V
Sbjct: 306 KILDYESEPAIKAPVAV 322


>gi|57100565|ref|XP_533309.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Canis
           familiaris]
          Length = 325

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 127/269 (47%), Positives = 167/269 (62%), Gaps = 20/269 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H++  G+ + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 33  QYLGQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 92

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGPIYG QWR +         
Sbjct: 93  IKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREEGDLGPIYGFQWRHFGAEYKDKDS 152

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+  WN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 153 DYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQ 212

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 213 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 272

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            PR  P++ I   +  +  F+ EDF +  
Sbjct: 273 EPRPFPKLRILRRVEKIDDFKAEDFQIEG 301


>gi|237835909|ref|XP_002367252.1| bifunctional dihydrofolate reductase / thymidylate synthase
           [Toxoplasma gondii ME49]
 gi|729370|sp|Q07422|DRTS_TOXGO RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|295357|gb|AAB00163.1| dihydrofolate reductase-thymidylate synthase [Toxoplasma gondii]
 gi|211964916|gb|EEB00112.1| bifunctional dihydrofolate reductase / thymidylate synthase
           [Toxoplasma gondii ME49]
 gi|221484873|gb|EEE23163.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Toxoplasma gondii GT1]
 gi|221506073|gb|EEE31708.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Toxoplasma gondii VEG]
          Length = 610

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/285 (46%), Positives = 177/285 (62%), Gaps = 23/285 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL+  +I  G    DRTGVG  S FG  MR+ L + FPLLTTK+V WK V+ ELLWF
Sbjct: 326 QYLDLIADIINNGRTMDDRTGVGVISKFGCTMRYSLDQAFPLLTTKRVFWKGVLEELLWF 385

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           +RGD+N ++L   GV IWD+   ++            G++GP YG QWR +         
Sbjct: 386 IRGDTNANHLSEKGVKIWDKNVTREFLDSRNLPHREVGDIGPGYGFQWRHFGAAYKDMHT 445

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSC 161
           DY G  +DQ+ +++Q LR +P  RR +++AWN A +D+MALPPCH L QFYV D  +LSC
Sbjct: 446 DYTGQGVDQLKNVIQMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVNDQKELSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS DV LG+PFNIASYSLLT+M+A V   +  EFIH +G+ H+Y NH E    QL 
Sbjct: 506 IMYQRSCDVGLGVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYTNHVEALKEQLR 565

Query: 222 RSPRTLP--QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P   ++    I ++  F  EDF +  Y PH  I  +++V
Sbjct: 566 REPRPFPIVNILNKERIKEIDDFTAEDFEVVGYVPHGRIQMEMAV 610


>gi|91093359|ref|XP_969294.1| PREDICTED: similar to thymidylate synthase [Tribolium castaneum]
 gi|270015300|gb|EFA11748.1| hypothetical protein TcasGA2_TC004238 [Tribolium castaneum]
          Length = 313

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 130/278 (46%), Positives = 176/278 (63%), Gaps = 21/278 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL  +R +++ G  R DRT +GT S FG QMR+ L    FPLLTTK+V W++VV ELL
Sbjct: 30  YQYLSHIRQILEKGVQRMDRTRIGTLSIFGVQMRYSLRDNVFPLLTTKRVFWRAVVEELL 89

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102
           WF++G +N + L    V IWD  + +            +G+LGPIYG QWR +       
Sbjct: 90  WFIKGSTNSNDLKEKNVHIWDANSSRAFLDSVGLEEYEEGDLGPIYGFQWRHFGAEYKGV 149

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    +DQ++ ++ ++R +P  RR I+SAWN   + KMALPPCHCL QF+V  G+LS
Sbjct: 150 QGDYTNEGVDQLARVIHTIRTNPNDRRIIMSAWNPKDLHKMALPPCHCLAQFFVAEGELS 209

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQR+GD+ LG+PFNIASY+LLT M+A V G + GEFIH++GD H+Y NH E    QL
Sbjct: 210 CLLYQRAGDMGLGVPFNIASYALLTRMIAHVTGLKPGEFIHSIGDSHVYLNHVEPIKEQL 269

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           +R PR  P + I   +  +  F +EDF L  Y PH  +
Sbjct: 270 TRVPRAFPTLNIKRPVSSIDDFTFEDFELVGYNPHPKL 307


>gi|21702230|emb|CAD38046.1| dihydrofolate reductase-thymidylate synthase [Pisum sativum]
          Length = 530

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/283 (45%), Positives = 174/283 (61%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL+L++ +I  G+ + DRTG GT S FG QMRF+L +GFPLLTTK+V W+ VV ELLW
Sbjct: 248 YMYLNLVQEIISQGTSKGDRTGTGTLSKFGCQMRFNLRRGFPLLTTKRVFWRGVVEELLW 307

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+ G +N   L   G+ IWD+ A ++            G+LGP+YG QWR +        
Sbjct: 308 FISGSTNAKVLQEKGIHIWDDNASREFLDSIGLSEREEGDLGPVYGFQWRHFGARYTNMH 367

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++  ++ +P  RR I+SAWN A +  MALPPCH   QFYV NG+LSC
Sbjct: 368 NDYAGQGVDQLLDVINKVKHNPDDRRIILSAWNPADLKLMALPPCHMSAQFYVANGELSC 427

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+ QRS D+ LG+PFNIASY+LLT M+A +     G+FIH LGD H+Y  H      QL 
Sbjct: 428 QMNQRSADMGLGVPFNIASYALLTCMIAHICELVPGDFIHVLGDAHVYQTHVRPLQEQLH 487

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             P+  P + IN    D+ SF   DF L  Y+PH  I  K++V
Sbjct: 488 NLPKPFPTLKINSKKKDIDSFVATDFKLIDYDPHQKIEMKMAV 530


>gi|13242405|ref|NP_077428.1| thymidylate synthase [Cercopithecine herpesvirus 9]
 gi|11036557|gb|AAG27186.1|AF275348_6 thymidylate synthetase [Cercopithecine herpesvirus 9]
          Length = 295

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 126/283 (44%), Positives = 175/283 (61%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+ +  ++  G  + DRTG GT S FG Q R++L   FPLLTTK+V WK VV ELLW
Sbjct: 13  YQYLEQVNFILHNGVQKTDRTGTGTLSVFGMQSRYNLRNEFPLLTTKRVFWKGVVEELLW 72

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101
           F++G +N + L   GV IW     K            +G+LGP+YG QWR +        
Sbjct: 73  FIKGSTNSTELVEKGVKIWSAHGSKQFLHSNGFDNRQEGDLGPVYGFQWRHFGAEYVDMN 132

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y G  +DQ+ +++  ++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSC
Sbjct: 133 TNYFGQGVDQLQNVINLIKTNPNDRRIILCAWNAKDVPLMALPPCHMLCQFYVANNELSC 192

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT M+A V   + G+ +HT+GD H+Y NH E   LQL+
Sbjct: 193 QMYQRSADMGLGVPFNIASYALLTYMIAHVTDLKTGDLVHTIGDAHIYLNHIEPLKLQLT 252

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P+  P + I   + D+  F+ +DF L  Y PH +I  ++SV
Sbjct: 253 RQPKQFPTLRITRTVKDINDFKADDFVLEGYNPHNSIPMEMSV 295


>gi|73961995|ref|XP_849163.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Canis
           familiaris]
          Length = 325

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 127/269 (47%), Positives = 167/269 (62%), Gaps = 20/269 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H++  G+ + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 33  QYLRQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 92

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGPIYG QWR +         
Sbjct: 93  IKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREEGDLGPIYGFQWRHFGAEYKDKDS 152

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+  WN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 153 DYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQ 212

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 213 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 272

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            PR  P++ I   +  +  F+ EDF +  
Sbjct: 273 EPRPFPKLRILRRVEKIDDFKAEDFQIEG 301


>gi|156552231|ref|XP_001606421.1| PREDICTED: similar to ENSANGP00000013700 [Nasonia vitripennis]
          Length = 313

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/284 (45%), Positives = 177/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L+  +I  G+ + DRTGVGT   FG QMRF L  G FPLLTTK V W++VV ELL
Sbjct: 30  YQYLKLIERIIAKGAVKTDRTGVGTHFIFGTQMRFSLRDGIFPLLTTKNVLWRAVVEELL 89

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WF++G +N   L   GV IW+     E+ D       ++G+LGP+YG QWR +       
Sbjct: 90  WFIKGSTNAKELADKGVKIWNANSSREFLDSCGFTDREEGDLGPVYGFQWRHFGAKYVNM 149

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+  ++  ++  P  RR I+ AWN   I  MALPPCH L QF V +G+LS
Sbjct: 150 HTDYTGQGVDQLQDVINKIKNKPDDRRIIMCAWNPVDIPIMALPPCHALVQFCVADGELS 209

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASYSLLT M+A +   + G+F+HT+GD H+Y NH      Q+
Sbjct: 210 CQLYQRSADMGLGVPFNIASYSLLTCMIAHITNLKPGDFVHTMGDCHVYRNHVPALKEQI 269

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +R P+  P + I   + ++  F+  DF L +Y+PHA I   ++V
Sbjct: 270 ARKPKPFPTLKITRKVENIDDFKSTDFELNNYKPHAKIYMPMAV 313


>gi|300508797|pdb|3NRR|A Chain A, Co-Crystal Structure Of Dihydrofolate
           Reductase-Thymidylate Synthase From Babesia Bovis With
           Dump, Raltitrexed And Nadp
 gi|300508798|pdb|3NRR|B Chain B, Co-Crystal Structure Of Dihydrofolate
           Reductase-Thymidylate Synthase From Babesia Bovis With
           Dump, Raltitrexed And Nadp
          Length = 515

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 129/282 (45%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+L  V+  G  + +RTG    S FGYQMRFDLS+ FPLLTTKKV  +S++ ELLWF
Sbjct: 234 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 293

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++G +N + L    V IW+     ++ DK+G       +LGPIYG QWR +         
Sbjct: 294 IKGSTNGNDLLAKNVRIWELNGRRDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHA 353

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  IDQ++ I+  ++ +P  RR IV +WNV+ + KMALPPCHC FQFYV + KLSC 
Sbjct: 354 DYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 413

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYS+LT M+A V G   GEF+H L D H+Y +H +    Q++R
Sbjct: 414 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 473

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P   P++ +NP+I ++  F  +D  +  Y  H  I   +S 
Sbjct: 474 IPHPFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMSA 515


>gi|294878205|ref|XP_002768310.1| dihydrofolate reductase-thymidylate synthase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239870558|gb|EER01028.1| dihydrofolate reductase-thymidylate synthase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 492

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 133/286 (46%), Positives = 181/286 (63%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           ++YL L+  +I+ G D  DRTGVGT++ F   MRF L  G FPLLTTK+V W+ VV ELL
Sbjct: 207 YEYLRLIEEIIENGEDADDRTGVGTKTIFSCHMRFSLRDGVFPLLTTKRVFWRGVVEELL 266

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WF+RGD+N  +L   GV IWD     E+ D       ++G+LGP+YG QWR +       
Sbjct: 267 WFIRGDTNAKHLSDQGVKIWDLNGTREFLDGRGLTHREEGDLGPVYGFQWRHFGADYVDM 326

Query: 102 -PDYD-GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK- 158
             DY     +DQ++ +++ L+ +P  RR I++AWN   +  MALPPCH + QFYV++ + 
Sbjct: 327 HADYSKSGGVDQLAEVIRQLKENPMDRRIIMTAWNPTALPLMALPPCHMMCQFYVNSKQE 386

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC +YQRS D+ LG+PFNIASY+LLT MLA V G + GEF H LG+ H+YNNH E    
Sbjct: 387 LSCAMYQRSADMGLGVPFNIASYALLTCMLAQVCGLKPGEFCHHLGNTHVYNNHIEPLRQ 446

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R+PR  P + INPN+  +   +  DF L  Y P   I  +++V
Sbjct: 447 QLKRTPRPFPLLKINPNVKTIDDIKSSDFELIGYNPWGKIAMEMAV 492


>gi|297798456|ref|XP_002867112.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312948|gb|EFH43371.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 565

 Score =  263 bits (671), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 129/281 (45%), Positives = 173/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L++ +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 285 YLNLVKEIISNGNLKGDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 344

Query: 64  RGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD  A +            +G+LGP+YG QWR +         D
Sbjct: 345 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 404

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV +G+LSCQ+
Sbjct: 405 YTGQGFDQLLDVIHKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVADGELSCQM 464

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT +LA V     G+FIH +GD H+Y NH      QL   
Sbjct: 465 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 524

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + I P   D+ SF  +DF L  Y+PH  I  K++V
Sbjct: 525 PKPFPVLKIKPEKKDIDSFVSDDFELIGYDPHKKIDMKMAV 565


>gi|289466117|gb|ADC94829.1| dihydrofolate reductase-thymidylate synthase [Plasmodium billbrayi]
          Length = 599

 Score =  263 bits (671), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 318 YQYLNIIYDIIMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 377

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 378 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 437

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 438 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 497

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 498 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAEFIHVLGNAHVYNNHIDSLKIQLN 557

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 558 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 594


>gi|225428412|ref|XP_002280254.1| PREDICTED: similar to Bifunctional dihydrofolate
           reductase-thymidylate synthase [Vitis vinifera]
          Length = 524

 Score =  263 bits (671), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 133/281 (47%), Positives = 170/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+  +I  G  R DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 244 YLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFI 303

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD  A +D            G+LGPIYG QWR +         D
Sbjct: 304 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHAD 363

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV +G+LSCQ+
Sbjct: 364 YTGQGFDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQM 423

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT M+A V     G+FIH +GD H+Y  H      QL + 
Sbjct: 424 YQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKL 483

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   ++ SF   DF L  Y+PH  I  K++V
Sbjct: 484 PKPFPILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 524


>gi|269860859|ref|XP_002650147.1| thymidylate synthase [Enterocytozoon bieneusi H348]
 gi|220066420|gb|EED43902.1| thymidylate synthase [Enterocytozoon bieneusi H348]
          Length = 291

 Score =  263 bits (671), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 134/284 (47%), Positives = 181/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60
           HQYL+L++ +++ G    DRTG GTRS FG Q+RF L +  FPLLTTK+V  KS++ ELL
Sbjct: 8   HQYLELIKRILRDGIQCNDRTGTGTRSVFGAQLRFSLRNNQFPLLTTKRVAIKSIIGELL 67

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG------ELGPIYGVQWRSW-------- 101
           +F+RG +N   L + G+ IWD     E+ DK G      +LGP+YG QWR +        
Sbjct: 68  FFIRGQTNNKILKQQGIHIWDGNSTREFFDKVGIQREEDDLGPVYGFQWRHFGAHYKTCH 127

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++  ++ +P SRR IVSAWN   +  MALPPCH LFQF V   KLSC
Sbjct: 128 DDYTGEGVDQLKYVIDEIQKNPESRRIIVSAWNPLCLKDMALPPCHTLFQFRVYGNKLSC 187

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRSGDV LGIPFNIASY+LLT+++A +   +  EF+HT+GD H+YN+H E  + Q++
Sbjct: 188 MLYQRSGDVGLGIPFNIASYALLTIIVAQICNLEPDEFVHTIGDAHIYNDHIEALNKQIT 247

Query: 222 RSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+P   P++ + N        F  EDF L  Y  H  I+ K+SV
Sbjct: 248 RTPFPFPKLKLANKEYRKFEDFEIEDFILEDYNHHPGIIMKMSV 291


>gi|126740659|ref|ZP_01756345.1| Thymidylate synthase [Roseobacter sp. SK209-2-6]
 gi|126718174|gb|EBA14890.1| Thymidylate synthase [Roseobacter sp. SK209-2-6]
          Length = 325

 Score =  263 bits (671), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/293 (44%), Positives = 182/293 (62%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLDL+  V++ G  R DRTGVGTRS FG  +RFDLS G  P+LTTK+V+WK+ + E+L
Sbjct: 33  YQYLDLMEQVLEKGDKRVDRTGVGTRSLFGAMLRFDLSDGTAPILTTKRVYWKTAIKEML 92

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L R  V IW +W                            A + GELGP
Sbjct: 93  WFLTGGTNIQPLLRDNVRIWSDWPLATYRSETGEEISQEDFEQRILEDDAFATRWGELGP 152

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +++SLR  P SRR +   WNVA + +MALPPCH ++Q+
Sbjct: 153 VYGKQWRRWMGADGQEHDQITGLIKSLRETPASRRMLFHGWNVAELSEMALPPCHMVYQY 212

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+C L+QRS D+ LG+PFN    S L +MLA   G + GE +   GDVHLY N
Sbjct: 213 HVTSDGRLNCLLFQRSVDLLLGMPFNCVGASALQLMLAQQAGLRPGELVWVGGDVHLYLN 272

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q++R PR LPQ+ +  +  ++ S++  DF++  Y+PH  I A+V+V
Sbjct: 273 HLDQAREQMAREPRPLPQISLTRHPENIDSYKISDFSVEGYDPHPPIAAEVAV 325


>gi|70952417|ref|XP_745378.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Plasmodium chabaudi chabaudi]
 gi|56525682|emb|CAH78219.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Plasmodium chabaudi chabaudi]
          Length = 498

 Score =  263 bits (671), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 127/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 216 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLSEYFPLLTTKKLFVRGIIEELLW 275

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 276 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 335

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    +DQ+ +I+  ++ DP  RR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 336 ADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 395

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH E   +QL+
Sbjct: 396 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHVESLKVQLN 455

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R+P   P + +NP I ++  F   DFT+++Y  H  I
Sbjct: 456 RTPYPFPTLKLNPEIKNIEDFTISDFTVQNYVHHDKI 492


>gi|118937|sp|P20712|DRTS_PLACH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|160266|gb|AAA29587.1| dihydrofolate reductase/thymidylate synthase [Plasmodium chabaudi]
          Length = 583

 Score =  263 bits (671), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 127/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 301 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLSEYFPLLTTKKLFVRGIIEELLW 360

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 361 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 420

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    +DQ+ +I+  ++ DP  RR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 421 ADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 480

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH E   +QL+
Sbjct: 481 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHVESLKVQLN 540

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R+P   P + +NP I ++  F   DFT+++Y  H  I
Sbjct: 541 RTPYPFPTLKLNPEIKNIEDFTISDFTVQNYVHHDKI 577


>gi|222615976|gb|EEE52108.1| hypothetical protein OsJ_33908 [Oryza sativa Japonica Group]
          Length = 574

 Score =  263 bits (671), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 127/273 (46%), Positives = 171/273 (62%), Gaps = 20/273 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL+L+  +I+ G+ + DRTG GT S FG QMRF+L   FPLLTTKKV W+ VV ELLW
Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+ G ++   L   G+ IWD     E+ D       ++G+LGP+YG QWR +        
Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN + + KMALPPCH   QFYV++G+LSC
Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVESGELSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V G   GEF+H +GD H+Y  H    + Q+ 
Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAHVCGLSPGEFVHVIGDAHVYRTHVRALEEQIQ 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
           + P+  P + INP   D+ SF   DF L    P
Sbjct: 479 KLPKPFPVLKINPLKKDIDSFVASDFKLVGLSP 511



 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
           ++G   GEF+H +GD H+Y  H    + Q+ + P+  P + INP   D+ SF   DF L
Sbjct: 506 LVGLSPGEFVHVIGDAHVYRTHVRALEEQIQKLPKPFPVLKINPLKKDIDSFVASDFKL 564


>gi|9625888|ref|NP_040136.1| thymidylate synthase [Human herpesvirus 3]
 gi|136617|sp|P09249|TYSY_VZVD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|259550834|sp|Q4JQW2|TYSY_VZVO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|60002|emb|CAA27896.1| thymidylate synthase [Human herpesvirus 3 strain Dumas]
 gi|46981424|gb|AAT07695.1| thymidylate synthase [Human herpesvirus 3]
 gi|46981495|gb|AAT07771.1| thymidylate synthase [Human herpesvirus 3]
 gi|66865982|gb|AAY57630.1| ORF13 [Human herpesvirus 3]
 gi|66866054|gb|AAY57701.1| ORF13 [Human herpesvirus 3]
 gi|83721821|emb|CAI44856.1| thymidylate synthase [Human herpesvirus 3]
 gi|90992812|gb|ABE03031.1| thymidylate synthase [Human herpesvirus 3]
 gi|91980314|gb|ABE67121.1| thymidylate synthase [Human herpesvirus 3]
 gi|94481811|gb|ABF21513.1| thymidylate synthase [Human herpesvirus 3]
 gi|94481885|gb|ABF21586.1| thymidylate synthase [Human herpesvirus 3]
 gi|94481959|gb|ABF21659.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482033|gb|ABF21732.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482107|gb|ABF21805.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482181|gb|ABF21878.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482255|gb|ABF21951.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482329|gb|ABF22024.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482403|gb|ABF22097.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482477|gb|ABF22170.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482551|gb|ABF22243.1| thymidylate synthase [Human herpesvirus 3]
 gi|111184746|gb|ABH08454.1| thymidylate synthase [Human herpesvirus 3]
 gi|157965782|gb|ABW06928.1| thymidylate synthase [Human herpesvirus 3]
          Length = 301

 Score =  263 bits (671), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 126/282 (44%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  +  ++++G  +RDRTG+GT S FG Q R++L   FPLLTTK+V W++VV ELLWF
Sbjct: 20  QYLKQVDDILRYGVRKRDRTGIGTLSLFGMQARYNLRNEFPLLTTKRVFWRAVVEELLWF 79

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR----SWPDYDG 106
           +RG ++   L    + IWD +                G+LGPIYG QWR     + D   
Sbjct: 80  IRGSTDSKELAAKDIHIWDIYGSSKFLNRNGFHKRHTGDLGPIYGFQWRHFGAEYKDCQS 139

Query: 107 NV----IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           N     IDQ+ +++ +++ +P SRR I+S+WN   I  M LPPCH L QFYV NG+LSCQ
Sbjct: 140 NYLQQGIDQLQTVIDTIKTNPESRRMIISSWNPKDIPLMVLPPCHTLCQFYVANGELSCQ 199

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRSGD+ LG+PFNIA Y+LLT ++A V G + G+ IHT+GD H+Y NH +   +QL+R
Sbjct: 200 VYQRSGDMGLGVPFNIAGYALLTYIVAHVTGLKTGDLIHTMGDAHIYLNHIDALKVQLAR 259

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           SP+  P + I  N+ D+  F+++DF L  Y PH  +  ++++
Sbjct: 260 SPKPFPCLKIIRNVTDINDFKWDDFQLDGYNPHPPLKMEMAL 301


>gi|297744418|emb|CBI37680.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  262 bits (670), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 133/281 (47%), Positives = 170/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+  +I  G  R DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 328 YLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFI 387

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD  A +D            G+LGPIYG QWR +         D
Sbjct: 388 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHAD 447

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV +G+LSCQ+
Sbjct: 448 YTGQGFDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQM 507

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT M+A V     G+FIH +GD H+Y  H      QL + 
Sbjct: 508 YQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKL 567

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   ++ SF   DF L  Y+PH  I  K++V
Sbjct: 568 PKPFPILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 608


>gi|82540717|ref|XP_724655.1| thymidylate synthase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479372|gb|EAA16220.1| thymidylate synthase, putative [Plasmodium yoelii yoelii]
          Length = 588

 Score =  262 bits (670), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 178/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 306 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLNQYFPLLTTKKLFVRGIIEELLW 365

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 366 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 425

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y    +DQ+ +I+  ++ DP  RR I+ AWNV  +DKMALPPCH L QFYV +GKLSC
Sbjct: 426 DNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDKMALPPCHILCQFYVFDGKLSC 485

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH E   +QL+
Sbjct: 486 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHIESLKIQLN 545

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R+P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 546 RTPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKI 582


>gi|302759210|ref|XP_002963028.1| hypothetical protein SELMODRAFT_404548 [Selaginella moellendorffii]
 gi|300169889|gb|EFJ36491.1| hypothetical protein SELMODRAFT_404548 [Selaginella moellendorffii]
          Length = 502

 Score =  262 bits (670), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 128/283 (45%), Positives = 177/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +I+ G+ R DRTG GT S FG QMRF+L   FPLLTTK+V W+ VV ELLW
Sbjct: 220 YQYLNLIKDIIETGNTRSDRTGTGTISKFGCQMRFNLRNSFPLLTTKRVFWRGVVEELLW 279

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+ G +N   L   G+ IW      E+ D       ++ +LGP+YG QWR +        
Sbjct: 280 FISGSTNAKVLEDKGIHIWKGNGSREYLDSIGLSEREENDLGPVYGFQWRHFGARYSTMH 339

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++  P  RR ++S+WN A + +MALPPCH   QFYV NG+LSC
Sbjct: 340 DDYTGQGVDQLAEVIDKIKNKPDDRRIVLSSWNPADLKQMALPPCHMFAQFYVSNGELSC 399

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT M+A V     G+F+H LGD H+Y NH +    QL 
Sbjct: 400 QMYQRSCDMGLGVPFNIASYALLTCMIAHVCDLAPGDFVHVLGDAHVYTNHVDPLKEQLE 459

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             P+  P + I  +  D+ SF  +DF L  YE H  I  K+++
Sbjct: 460 NVPKPFPILKIATSNKDIDSFTAKDFQLVDYESHQRIAMKMAL 502


>gi|289466113|gb|ADC94827.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           billcollinsi]
          Length = 607

 Score =  262 bits (669), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 325 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 384

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    +D             +LGPIYG QWR +        
Sbjct: 385 FIRGETNGNTLLNKNVRIWEANGTRDFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 444

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +IV  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 445 DNYENKGVDQLKNIVDLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 504

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 505 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 564

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 565 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 601


>gi|157135461|ref|XP_001663452.1| bifunctional dihydrofolate reductase-thymidylate synthase [Aedes
           aegypti]
 gi|108870229|gb|EAT34454.1| bifunctional dihydrofolate reductase-thymidylate synthase [Aedes
           aegypti]
          Length = 313

 Score =  262 bits (669), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 132/283 (46%), Positives = 175/283 (61%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYL+ ++ +I  G  R DRTGVGT S FG QMR+ L     PLLTTK+V ++ V  ELLW
Sbjct: 31  QYLEAIQRIIDTGDKRVDRTGVGTLSIFGTQMRYSLRDNVIPLLTTKRVFFRGVAEELLW 90

Query: 62  FLRGDSNVSYLHRHGVSIWDE-----------WADKD-GELGPIYGVQWRSW-------- 101
           F+RG +N   L    V IWD            + D+D G+LGP+YG QWR +        
Sbjct: 91  FIRGSTNAKDLQAKNVHIWDGNSTREFLDASGFTDRDEGDLGPVYGFQWRHFGAKYKTCN 150

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  IDQ++ ++  ++ +P  RR I+SAWN   I +MALPPCHCL QF+V NG+LSC
Sbjct: 151 DDYTGQGIDQLAEVINRIKTNPTDRRIIMSAWNPIDIPQMALPPCHCLAQFFVANGELSC 210

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASY+LLT M+A V G + GEFIHT GD H+Y NH E    QL 
Sbjct: 211 QLYQRSADMGLGVPFNIASYALLTHMMAHVTGLKAGEFIHTTGDTHVYLNHVEPLKEQLQ 270

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P+  P +    ++  +  F   DF +  Y+P+  I  +++V
Sbjct: 271 RVPKRFPTLQFKRHVQSIDEFEMGDFEVCGYDPYPTIKMQMAV 313


>gi|2833336|sp|Q27713|DRTS_PLABA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|555825|gb|AAB60237.1| dihydrofolate reductase thymidylate synthase [Plasmodium berghei]
          Length = 587

 Score =  262 bits (669), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 125/277 (45%), Positives = 178/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 305 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLNEYFPLLTTKKLFIRGIIEELLW 364

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 365 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 424

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y    +DQ+ +I+  ++ DP  RR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 425 DNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKNLDQMALPPCHILCQFYVFDGKLSC 484

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH E   +QL+
Sbjct: 485 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQAAEFIHVLGNAHVYNNHIESLKIQLN 544

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R+P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 545 RTPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKI 581


>gi|42685|emb|CAA27600.1| thyA (C-terminal) [Escherichia coli]
          Length = 202

 Score =  262 bits (669), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 117/202 (57%), Positives = 152/202 (75%)

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 1   LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 60

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 61  PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 120

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 121 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 180

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 181 RFEDFEIEGYDPHPGIKAPVAI 202


>gi|223646840|gb|ACN10178.1| Thymidylate synthase [Salmo salar]
 gi|223672701|gb|ACN12532.1| Thymidylate synthase [Salmo salar]
          Length = 333

 Score =  262 bits (669), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 125/281 (44%), Positives = 176/281 (62%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+   ++++ G  + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 53  YLNQCEYILQHGHRKGDRTGTGVISVFGSQTRYSLRDQFPLLTTKRVFWKGILEELLWFI 112

Query: 64  RGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PD 103
           +G +N   L   GV IWD     ++ DK       +G+LGP+YG QWR +         D
Sbjct: 113 KGSTNAKELTEKGVRIWDANGSRQFLDKMGFTDREEGDLGPVYGFQWRHYGAEYSDMHKD 172

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++ +++ +P  RR I+ AWN   +  M LPPCH L QFYV +G+LSCQL
Sbjct: 173 YTGQGVDQLQKVIDTIKTNPEDRRIIMCAWNPKDLPHMVLPPCHALCQFYVIDGELSCQL 232

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y+NH E   +QL R 
Sbjct: 233 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYSNHIEPLKVQLQRE 292

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R  P++ +   +  +  FR EDF +  Y PH  I  +++V
Sbjct: 293 IRPFPKLKLLRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 333


>gi|15227185|ref|NP_179230.1| THY-1 (THYMIDYLATE SYNTHASE 1); dihydrofolate reductase/
           thymidylate synthase [Arabidopsis thaliana]
 gi|21264432|sp|Q05762|DRTS1_ARATH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase 1; Short=DHFR-TS 1; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|4544392|gb|AAD22302.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
 gi|17381024|gb|AAL36324.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis
           thaliana]
 gi|21281275|gb|AAM45080.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis
           thaliana]
 gi|330251395|gb|AEC06489.1| thymidylate synthase [Arabidopsis thaliana]
          Length = 519

 Score =  262 bits (669), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 131/281 (46%), Positives = 171/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+++  +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 239 YLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 298

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD     E+ D       ++G+LGP+YG QWR +         D
Sbjct: 299 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 358

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV  G+LSCQ+
Sbjct: 359 YTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 418

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT MLA V     G+FIH LGD H+Y  H      QL   
Sbjct: 419 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYKTHVRPLQEQLLNL 478

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P M INP    + SF   DF L  Y+PH  I  K++V
Sbjct: 479 PKPFPVMKINPEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 519


>gi|170586742|ref|XP_001898138.1| thymidylate synthase [Brugia malayi]
 gi|158594533|gb|EDP33117.1| thymidylate synthase, putative [Brugia malayi]
          Length = 306

 Score =  262 bits (669), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 135/283 (47%), Positives = 172/283 (60%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61
           +YLD +R+++K G    DRTGVGT S FG    + L  G  P+LTTK+V+WK VV ELLW
Sbjct: 24  KYLDQVRYILKNGERIDDRTGVGTISVFGMHSVYSLRNGVVPVLTTKRVYWKGVVEELLW 83

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101
           F+RGD+N  +L   GV IWD    +            +G+LGPIYG QWR          
Sbjct: 84  FIRGDTNAKHLSEKGVRIWDANGSRQFLDQCGFSDRSEGDLGPIYGFQWRHCGAEYRGMD 143

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    IDQ+S I+  ++ +P+SRR I+SAWNV  +  MALPPCH L QF V NG+LSC
Sbjct: 144 TDYTNQGIDQLSEIIDLIKNEPHSRRIILSAWNVKDLKLMALPPCHTLAQFAVRNGELSC 203

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFN+ASY LLT M+A V G + G   H LGD H+Y NH +    QL 
Sbjct: 204 QLYQRSGDMGLGVPFNLASYGLLTHMIAHVCGLKTGHLCHVLGDAHVYMNHVDALQEQLK 263

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P +    NI  +  F YE   L +Y+P  AI   ++V
Sbjct: 264 RQPRQFPTVRFIGNIKTIDDFTYESIVLENYQPMPAIKMAMAV 306


>gi|15384270|gb|AAK96220.1|AF406808_1 thymidylate synthase [Trichinella spiralis]
 gi|13096100|gb|AAF80470.2| thymidylate synthase [Trichinella spiralis]
 gi|316977369|gb|EFV60479.1| thymidylate synthase [Trichinella spiralis]
          Length = 307

 Score =  261 bits (668), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 130/283 (45%), Positives = 180/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
            YL+ L+ +I  G  + DRTG+GT STFG Q R+ L    FPLLTTK+V W+ VV ELLW
Sbjct: 25  NYLNQLKDIIDHGVRKNDRTGIGTLSTFGTQSRYCLRDDIFPLLTTKRVFWRGVVEELLW 84

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+ G +N   L    V+IWD     E+ D       ++G+LGP+YG QWR +        
Sbjct: 85  FISGSTNAKQLSEKNVNIWDGNSSREFLDSRGLYNYEEGDLGPVYGFQWRHFGCPYSSMT 144

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+   ++ +R +P SRR I++AWN   ++K+ALPPCHC  QFYV +G+LSC
Sbjct: 145 ADYKGKGYDQLQQCIKMIREEPESRRIIMTAWNPCDLEKVALPPCHCFVQFYVADGELSC 204

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A +   + G FIHT+GD H+Y  H +   +Q+ 
Sbjct: 205 QMYQRSADMGLGVPFNIASYSLLTRMIAHITSLKPGFFIHTIGDAHVYLTHVDALKVQME 264

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P++ I  N+ ++  FR EDF L +Y+P+  I   ++V
Sbjct: 265 RKPRPFPKLKILRNVENIDDFRAEDFELINYKPYPKISMPMAV 307


>gi|302797080|ref|XP_002980301.1| hypothetical protein SELMODRAFT_233517 [Selaginella moellendorffii]
 gi|300151917|gb|EFJ18561.1| hypothetical protein SELMODRAFT_233517 [Selaginella moellendorffii]
          Length = 509

 Score =  261 bits (668), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 127/283 (44%), Positives = 177/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L   FPLLTTK+V W+ VV ELLW
Sbjct: 227 YQYLNLIKDIIETGNTKSDRTGTGTISKFGCQMRFNLRNSFPLLTTKRVFWRGVVEELLW 286

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+ G +N   L   G+ IW      E+ D       ++ +LGP+YG QWR +        
Sbjct: 287 FISGSTNAKVLEDKGIHIWKGNGSREYLDSIGLSEREENDLGPVYGFQWRHFGARYSTMH 346

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++  P  RR ++S+WN A + +MALPPCH   QFYV NG+LSC
Sbjct: 347 DDYTGQGVDQLAEVIDKIKNKPDDRRIVLSSWNPADLKQMALPPCHMFAQFYVSNGELSC 406

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT M+A V     G+F+H LGD H+Y NH +    QL 
Sbjct: 407 QMYQRSCDMGLGVPFNIASYALLTCMIAHVCDLAPGDFVHVLGDAHVYTNHVDPLKEQLE 466

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             P+  P + I  +  D+ SF  +DF L  YE H  I  K+++
Sbjct: 467 NVPKPFPILKIATSNKDIDSFTAKDFQLVDYESHQRIAMKMAL 509


>gi|297836680|ref|XP_002886222.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332062|gb|EFH62481.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis lyrata
           subsp. lyrata]
          Length = 515

 Score =  261 bits (668), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 129/281 (45%), Positives = 171/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+++  +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 235 YLNMVEDIISNGNAKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 294

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD     E+ D       ++G+LGP+YG QWR +         D
Sbjct: 295 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 354

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV  G+LSCQ+
Sbjct: 355 YTGQGFDQLLDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 414

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT MLA V     G+FIH +GD H+Y  H      QL   
Sbjct: 415 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVIGDAHVYKTHVRPLQEQLQNP 474

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP    + SF   DF L  Y+PH  I  K++V
Sbjct: 475 PKPFPVLKINPEKKQIDSFVAADFDLTGYDPHKKIEMKMAV 515


>gi|195997697|ref|XP_002108717.1| hypothetical protein TRIADDRAFT_18453 [Trichoplax adhaerens]
 gi|190589493|gb|EDV29515.1| hypothetical protein TRIADDRAFT_18453 [Trichoplax adhaerens]
          Length = 317

 Score =  261 bits (668), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 124/284 (43%), Positives = 177/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L++ ++  G+ + DRTG GT+S FG QMRF L     PLLTTK+  W+ +  ELL
Sbjct: 34  YQYLRLIQRIMNEGNFKGDRTGTGTKSIFGAQMRFSLRDNQMPLLTTKRTFWRGIAEELL 93

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW------- 101
           WF++G +N + L+  G+  W+    ++            G+LGPIYG QWR +       
Sbjct: 94  WFVKGSTNANQLNEKGIKFWNANGSREFLDSRGLHEREVGDLGPIYGFQWRHFGAKYTNM 153

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ++ ++  ++  P  RR I+SAWN   + +MALPPCH   QFYV +G+LS
Sbjct: 154 HADYTGQGVDQLAEVIHKIKTSPNDRRIILSAWNPPDLPEMALPPCHAFVQFYVCDGRLS 213

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGD+ LG+PFNIASYSLLT M+A +   +  +F+HT+GD H+Y NHF+    QL
Sbjct: 214 CQLYQRSGDMGLGVPFNIASYSLLTHMIAHICDLEAEDFVHTIGDAHVYLNHFDALQEQL 273

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P+  P++     I D+  F+YEDF L+ Y+ H  I   ++V
Sbjct: 274 MREPKKFPKLNFKRKISDIDDFKYEDFELQDYQFHPTIKMDMAV 317


>gi|19481716|gb|AAL88992.1| WSSV124 [shrimp white spot syndrome virus]
          Length = 289

 Score =  261 bits (668), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 134/279 (48%), Positives = 179/279 (64%), Gaps = 21/279 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60
           HQYL+L+R +++ G  + DRTG GT S FG QMRF L     P+LTTKK+ W+ VV EL 
Sbjct: 5   HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELS 64

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------- 101
           WF+RG+++   L +  + IW+     E+ D        +G+LGP+YG QWR +       
Sbjct: 65  WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGFQWRHFGAEYDTC 124

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+++I+++LR +P  RR I++AWN   +  MALPPCH   QFYV NG+LS
Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGDV LG+PFNIASYSLLT ++AS++G + GEFI TLGD H+YN H E    QL
Sbjct: 185 CQLYQRSGDVGLGVPFNIASYSLLTHLMASMVGLKPGEFILTLGDAHIYNTHIEVLKKQL 244

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
            R PR  P++ I      +  F  + F L  Y+PH+  L
Sbjct: 245 CRVPRPFPKLRILMAPEKIEDFTIDMFYLEGYQPHSGNL 283


>gi|227432568|ref|ZP_03914549.1| thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351676|gb|EEJ41921.1| thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 322

 Score =  261 bits (668), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 135/317 (42%), Positives = 179/317 (56%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL ++++  GS + DRTG GTRS FG QMRF+L++GFPLLTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAQNILDEGSHKGDRTGTGTRSLFGTQMRFNLAEGFPLLTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K                                   
Sbjct: 66  FLRGDNNIRFLLEHNNHIWDEWAFKKWIESDKYTGPDMTNFGLRSQTDENFAKIYKEQKD 125

Query: 88  ----------------GELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADPYSRR 127
                           G +G +YG  WRSW           +DQ++ ++  ++  P SRR
Sbjct: 126 IFVNNILNDDEFKEEFGYIGNVYGKLWRSWETNSLTAGDETVDQVARLIDQIKETPNSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS Q+YQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSLQMYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ GEFIHT+GD H+YNNH +Q   QLSR    LP++ +NP +  L  +  +D 
Sbjct: 246 VAAQTGYEVGEFIHTIGDTHIYNNHVDQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  Y+   AI A V+V
Sbjct: 306 KILDYDSEPAIKAPVAV 322


>gi|72391754|ref|XP_846171.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei
           TREU927]
 gi|62358404|gb|AAX78868.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei]
 gi|70802707|gb|AAZ12612.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
          Length = 527

 Score =  261 bits (667), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 133/284 (46%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  +I  G  + DRTGVGTRS FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++N   L   G+ IWD      + D  G       +LGP+YG QWR +       
Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             D +G  +DQI++IV+SL  +P  RR I +AWN A + +MALPPCH + QFYV NG+LS
Sbjct: 364 KEDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT ++A   G + GE +HTLGD H+Y+NH E    QL
Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++   +   L  F+  D  +  Y P+  I  +++V
Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527


>gi|160264|gb|AAA29586.1| dihydrofolate reductase-thymidylate synthase (EC 1.5.1.3) (EC
           2.1.1.45) [Plasmodium falciparum]
          Length = 608

 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602


>gi|124505475|ref|XP_001351479.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Plasmodium falciparum 3D7]
 gi|1655965|gb|AAC53680.1| dihydrofolate reductase-thymidylate synthase [synthetic construct]
 gi|23498237|emb|CAD49208.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Plasmodium falciparum 3D7]
 gi|156067086|gb|ABU43153.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|156067088|gb|ABU43154.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|156067090|gb|ABU43155.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|156067092|gb|ABU43156.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|195957246|gb|ACG59401.1| dihydrofolate reductase/thymidylate synthase [Plasmodium
           falciparum]
          Length = 608

 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602


>gi|160262|gb|AAA29585.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|623444|gb|AAB59212.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
          Length = 608

 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602


>gi|301598514|pdb|3JSU|A Chain A, Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate
           Synthase(Pfdhfr-Ts) Complexed With Qn254, Nadph, And
           Dump
 gi|301598515|pdb|3JSU|B Chain B, Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate
           Synthase(Pfdhfr-Ts) Complexed With Qn254, Nadph, And
           Dump
          Length = 608

 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602


>gi|289193|gb|AAA32788.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
          Length = 519

 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 130/281 (46%), Positives = 171/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+++  +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 239 YLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 298

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD     E+ D       ++G+LGP+YG QWR +         D
Sbjct: 299 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 358

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV  G+LSCQ+
Sbjct: 359 YTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 418

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT MLA V     G+FIH LGD H+Y  H      QL   
Sbjct: 419 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYKTHVRPLQEQLLNP 478

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP    + SF   DF L  Y+PH  I  K++V
Sbjct: 479 PKPFPVLKINPEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 519


>gi|118938|sp|P13922|DRTS_PLAFK RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|160260|gb|AAA29580.1| dihydrofolate reductase-thymidylate synthetase [Plasmodium
           falciparum]
 gi|195957244|gb|ACG59400.1| dihydrofolate reductase/thymidylate synthase [Plasmodium
           falciparum]
          Length = 608

 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602


>gi|156067082|gb|ABU43151.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|156067084|gb|ABU43152.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
          Length = 608

 Score =  261 bits (667), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 602


>gi|116617576|ref|YP_817947.1| thymidylate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272223|sp|Q03YZ8|TYSY_LEUMM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116096423|gb|ABJ61574.1| thymidylate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 322

 Score =  261 bits (666), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 135/317 (42%), Positives = 178/317 (56%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + ++  GS + DRTG GTRS FG QMRF+L++GFPLLTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAQKILDEGSHKGDRTGTGTRSLFGTQMRFNLAEGFPLLTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K                                   
Sbjct: 66  FLRGDNNIRFLLEHNNHIWDEWAFKKWIESDKYTGPDMTNFGLRSQTDENFAKIYKEQKD 125

Query: 88  ----------------GELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADPYSRR 127
                           G +G +YG  WRSW           +DQ++ ++  ++  P SRR
Sbjct: 126 IFVNNILNDDEFKEEFGYIGNVYGKLWRSWETNSLTAGDETVDQVARLIDQIKETPNSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS Q+YQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSLQMYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ GEFIHT+GD H+YNNH +Q   QLSR    LP++ +NP +  L  +  +D 
Sbjct: 246 VAAQTGYEVGEFIHTIGDTHIYNNHVDQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  Y+   AI A V+V
Sbjct: 306 KILDYDSEPAIKAPVAV 322


>gi|2833337|sp|Q27783|DRTS_TRYBB RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|799175|gb|AAA91362.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei]
          Length = 527

 Score =  261 bits (666), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 133/284 (46%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  +I  G  + DRTGVGTRS FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSWP------ 102
           WFLRG++N   L   G+ IWD      + D  G       +LGP+YG QWR +       
Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             D +G  +DQI++IV+SL  +P  RR I +AWN A + +MALPPCH + QFYV NG+LS
Sbjct: 364 KVDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT ++A   G + GE +HTLGD H+Y+NH E    QL
Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++   +   L  F+  D  +  Y P+  I  +++V
Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527


>gi|156849051|ref|XP_001647406.1| hypothetical protein Kpol_1018p80 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118092|gb|EDO19548.1| hypothetical protein Kpol_1018p80 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 305

 Score =  261 bits (666), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 137/290 (47%), Positives = 180/290 (62%), Gaps = 28/290 (9%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
           QYL+L + +I  G DR DRTG GT S F   Q+RFDLS   FPLLTTKKV  K ++ ELL
Sbjct: 16  QYLNLCQRIIDEGEDRPDRTGTGTYSIFAPPQLRFDLSGDKFPLLTTKKVFTKGIILELL 75

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WF+ G ++   L   GV IW+     E+ D       ++G+LGP+YG QWR +       
Sbjct: 76  WFIAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYKTC 135

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD----- 155
             DY G  +DQ+  I+  ++ +PY RR I+SAWN     KMALPPCH   QFYV+     
Sbjct: 136 EDDYTGKGVDQLQEIIYKIKNNPYDRRIIMSAWNPPDFPKMALPPCHVFCQFYVNFPKDG 195

Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
              KLSC LYQRS D+ LG+PFNIASY+LLT M+A +   + GEFIHT+GD H+Y +H E
Sbjct: 196 SKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHICDMEAGEFIHTMGDAHVYKDHIE 255

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               Q+SR+PR  P++ I  +I D+  F++EDF +  Y PH  I  K+SV
Sbjct: 256 ALQEQMSRTPREFPKLKIKRDIKDINDFKFEDFEIVDYHPHGKIQMKMSV 305


>gi|261329761|emb|CBH12743.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei
           gambiense DAL972]
          Length = 527

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 133/284 (46%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  +I  G  + DRTGVGTRS FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSWP------ 102
           WFLRG++N   L   G+ IWD      + D  G       +LGP+YG QWR +       
Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             D +G  +DQI++IV+SL  +P  RR I +AWN A + +MALPPCH + QFYV NG+LS
Sbjct: 364 KVDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT ++A   G + GE +HTLGD H+Y+NH E    QL
Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++   +   L  F+  D  +  Y P+  I  +++V
Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527


>gi|260753698|ref|YP_003226591.1| thymidylate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258553061|gb|ACV76007.1| thymidylate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 296

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 129/293 (44%), Positives = 179/293 (61%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL L+  +++ G  R DRTGVGT S FG  MRFDLSKG  P+LTTKKV ++  + E+L
Sbjct: 4   HQYLRLVSDILEKGDQRHDRTGVGTLSLFGAMMRFDLSKGRIPILTTKKVSYRLAIREML 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL GD+N+  L   GVSIW +W                            A K G+LGP
Sbjct: 64  WFLSGDTNIRPLVEQGVSIWSDWPLARYQAETGALLSKKEFEAKILADTEFAKKWGDLGP 123

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG V DQI++++++L+++P SRR +   WNVA +  MALPPCH ++Q+
Sbjct: 124 VYGRQWRRWQGSDGQVYDQIATLIETLKSNPSSRRMLFHGWNVAELKDMALPPCHMVYQY 183

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS DVFLG+PFN+   + L  MLA   G   G+ + T GDVH+Y N
Sbjct: 184 HVTSDGRLNSLLYQRSADVFLGLPFNLVGAAALQAMLADQAGLALGDLVWTGGDVHIYRN 243

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +Q   QL+R PRT P++ +  +   +  ++ EDF +  Y+PH  I   V+V
Sbjct: 244 HIDQMKEQLAREPRTFPRLELMRHPNSITDYKIEDFAITGYDPHPPIKGAVAV 296


>gi|213511040|ref|NP_001134715.1| Thymidylate synthase [Salmo salar]
 gi|209735384|gb|ACI68561.1| Thymidylate synthase [Salmo salar]
          Length = 333

 Score =  260 bits (665), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 125/281 (44%), Positives = 175/281 (62%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+   ++++ G  + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 53  YLNQCEYILQHGHRKGDRTGTGVISVFGSQTRYSLRDQFPLLTTKRVFWKGILEELLWFI 112

Query: 64  RGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--------PD 103
           +G +N   L   GV IWD     ++ DK       +G+LGP+YG QWR +         D
Sbjct: 113 KGSTNAKELTEKGVRIWDANGSRQFLDKMGFTDREEGDLGPVYGFQWRHYGAEYSDMRKD 172

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++  ++ +P  RR I+ AWN   +  M LPPCH L QFYV +G+LSCQL
Sbjct: 173 YTGQGVDQLQKVIDIIKTNPEDRRIIMCAWNPKDLPHMVLPPCHALCQFYVIDGELSCQL 232

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y+NH E   +QL R 
Sbjct: 233 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYSNHIEPLKVQLQRE 292

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R  P++ +   +  +  FR EDF +  Y PH  I  +++V
Sbjct: 293 IRPFPKLKLLRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 333


>gi|213650267|ref|ZP_03380320.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|323222587|gb|EGA06952.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
          Length = 202

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 116/202 (57%), Positives = 151/202 (74%)

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           ++GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 1   MQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLKND 60

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 61  PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 120

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L  +
Sbjct: 121 LLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDY 180

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R++DF +  Y+PH  I A V++
Sbjct: 181 RFDDFEIEGYDPHPGIKAPVAI 202


>gi|115524162|ref|YP_781073.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
 gi|115518109|gb|ABJ06093.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
          Length = 201

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 114/176 (64%), Positives = 143/176 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL  ++  G+++ DRTG GT S FG+QMRF L  GFP+LTTK++  K++VHELL
Sbjct: 1   MHQYHDLLERILSDGAEKHDRTGTGTLSVFGHQMRFALDAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+ +V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNGVSIWDEWADANGDLGPVYGAQWRSWPTQDGGSIDQIAGVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
            +P SRR IV+AWN A ++KMALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+ F
Sbjct: 121 RNPDSRRLIVTAWNPAEVEKMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVGF 176


>gi|241762107|ref|ZP_04760190.1| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|283856542|ref|YP_163490.2| thymidylate synthase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|59803072|sp|Q9Z671|TYSY_ZYMMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|241373357|gb|EER62957.1| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|283775549|gb|AAV90379.2| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 296

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/293 (43%), Positives = 178/293 (60%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL L+  +++ G  R DRTGVGT S FG  MRFDLSKG  P+LTTKKV ++  + E+L
Sbjct: 4   HQYLRLVSDILEKGDQRHDRTGVGTLSLFGAMMRFDLSKGRIPILTTKKVSYRLAIREML 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL GD+N+  L   GVSIW +W                            A K G+LGP
Sbjct: 64  WFLSGDTNIRPLVEQGVSIWSDWPLARYQAETGALLSKKEFEAKILADTEFAKKWGDLGP 123

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG V DQI++++++L+++P SRR +   WNVA +  MALPPCH ++Q+
Sbjct: 124 VYGRQWRRWQGSDGQVYDQIATLIETLKSNPSSRRMLFHGWNVAELKDMALPPCHMVYQY 183

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS DVFLG+PFN+   + L  MLA   G   G+ + T GDVH+Y N
Sbjct: 184 HVTSDGRLNSLLYQRSADVFLGLPFNLVGAAALQAMLADQAGLALGDLVWTGGDVHIYRN 243

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +Q   QL+R PR  P++ +  +   +  ++ EDF +  Y+PH  I   V+V
Sbjct: 244 HIDQMKEQLAREPRAFPRLELTRHPNSITDYKIEDFAITGYDPHPPIKGAVAV 296


>gi|166164553|gb|ABY83775.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 637

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 355 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 414

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 415 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 474

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 475 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 534

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 535 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 594

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I ++  F   DFT+ +Y  H  I
Sbjct: 595 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 631


>gi|259149556|emb|CAY86360.1| Cdc21p [Saccharomyces cerevisiae EC1118]
 gi|323302856|gb|EGA56660.1| Cdc21p [Saccharomyces cerevisiae FostersB]
 gi|323307154|gb|EGA60437.1| Cdc21p [Saccharomyces cerevisiae FostersO]
          Length = 304

 Score =  259 bits (663), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/294 (47%), Positives = 180/294 (61%), Gaps = 31/294 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59
            QYLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV  + ++ EL
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------ 101
           LWFL GD++ + L   GV IWD     E+ DK G       +LGP+YG QWR +      
Sbjct: 71  LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  IDQ+  ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV     
Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190

Query: 156 ---NGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
              +GK  LSC LYQRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y 
Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H +    Q+SR+PR  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 251 DHIDALKEQISRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304


>gi|289466109|gb|ADC94825.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           reichenowi]
          Length = 598

 Score =  259 bits (663), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 317 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 376

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 377 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 436

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 437 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 496

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 497 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 556

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 557 RIPYPFPTLKLNPDIKNIEDFTILDFTIQNYVHHEKI 593


>gi|178847032|pdb|2H2Q|A Chain A, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate
           Reductase-Thymidylate Synthase
 gi|178847033|pdb|2H2Q|B Chain B, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate
           Reductase-Thymidylate Synthase
 gi|219689203|pdb|3CL9|A Chain A, Structure Of Bifunctional Tcdhfr-Ts In Complex With Mtx
 gi|219689204|pdb|3CLB|A Chain A, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
 gi|219689205|pdb|3CLB|B Chain B, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
 gi|219689206|pdb|3CLB|C Chain C, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
 gi|219689207|pdb|3CLB|D Chain D, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
 gi|237824093|pdb|3HBB|A Chain A, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
           Of Trypanosoma Cruzi In The Folate-Free State And In
           Complex With Two Antifolate Drugs, Trimetrexate And
           Methotrexate
 gi|237824094|pdb|3HBB|B Chain B, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
           Of Trypanosoma Cruzi In The Folate-Free State And In
           Complex With Two Antifolate Drugs, Trimetrexate And
           Methotrexate
 gi|237824095|pdb|3HBB|C Chain C, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
           Of Trypanosoma Cruzi In The Folate-Free State And In
           Complex With Two Antifolate Drugs, Trimetrexate And
           Methotrexate
 gi|237824096|pdb|3HBB|D Chain D, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
           Of Trypanosoma Cruzi In The Folate-Free State And In
           Complex With Two Antifolate Drugs, Trimetrexate And
           Methotrexate
 gi|297787629|pdb|3KJS|A Chain A, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
           D Inhibitors: Dq1 Inhibitor Complex
 gi|297787630|pdb|3KJS|B Chain B, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
           D Inhibitors: Dq1 Inhibitor Complex
 gi|297787631|pdb|3KJS|C Chain C, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
           D Inhibitors: Dq1 Inhibitor Complex
 gi|297787632|pdb|3KJS|D Chain D, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
           D Inhibitors: Dq1 Inhibitor Complex
 gi|20270967|gb|AAM18488.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|322825519|gb|EFZ30453.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma
           cruzi]
          Length = 521

 Score =  259 bits (662), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 131/284 (46%), Positives = 176/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++       L  +   D  +  Y P+  I  K++V
Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521


>gi|146231201|gb|ABQ12770.1| unknown [Shrimp white spot syndrome virus]
          Length = 289

 Score =  259 bits (662), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 134/279 (48%), Positives = 178/279 (63%), Gaps = 21/279 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60
           HQYL+L+R +++ G  + DRTG GT S FG QMRF L     P+LTTKK+ W+ VV ELL
Sbjct: 5   HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELL 64

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------- 101
           WF+RG+++   L +  + IW+     E+ D        +G+LGP+YG QWR +       
Sbjct: 65  WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGSQWRHFGAEYDTC 124

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+++I+++LR +P  RR I++AWN   +  MALPPCH   QFYV NG+LS
Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGDV LG+P NIASYSLLT ++AS+ G + GEFI TLGD H+YN H E    QL
Sbjct: 185 CQLYQRSGDVGLGVPSNIASYSLLTHLMASMAGLKPGEFILTLGDAHIYNTHIEVLKKQL 244

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
            R PR  P++ I      +  F  + F L  Y+PH+  L
Sbjct: 245 CRVPRPFPKLRILMAPKKIEDFTIDMFYLEGYQPHSGNL 283


>gi|20270965|gb|AAM18487.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 521

 Score =  259 bits (662), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 129/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++       L  +   D  +  Y P+  I  K++V
Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521


>gi|71653378|ref|XP_815327.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi
           strain CL Brener]
 gi|2833338|sp|Q27793|DRTS_TRYCR RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|301598498|pdb|3INV|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph, Dump And C-448 Antifolate
 gi|301598499|pdb|3INV|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph, Dump And C-448 Antifolate
 gi|301598500|pdb|3IRM|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Cycloguanil
 gi|301598501|pdb|3IRM|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Cycloguanil
 gi|301598502|pdb|3IRM|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Cycloguanil
 gi|301598503|pdb|3IRM|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Cycloguanil
 gi|301598504|pdb|3IRN|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Cycloguanil
 gi|301598505|pdb|3IRN|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Cycloguanil
 gi|301598506|pdb|3IRN|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Cycloguanil
 gi|301598507|pdb|3IRN|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Cycloguanil
 gi|301598508|pdb|3IRO|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Q-8 Antifolate
 gi|301598509|pdb|3IRO|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Q-8 Antifolate
 gi|301598510|pdb|3IRO|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Q-8 Antifolate
 gi|301598511|pdb|3IRO|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Q-8 Antifolate
 gi|1899001|gb|AAB49898.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|70880375|gb|EAN93476.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma
           cruzi]
          Length = 521

 Score =  259 bits (662), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 131/284 (46%), Positives = 176/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++       L  +   D  +  Y P+  I  K++V
Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521


>gi|323331459|gb|EGA72874.1| Cdc21p [Saccharomyces cerevisiae AWRI796]
          Length = 302

 Score =  259 bits (661), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 140/294 (47%), Positives = 180/294 (61%), Gaps = 31/294 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59
            QYLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV  + ++ EL
Sbjct: 9   EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 68

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------ 101
           LWFL GD++ + L   GV IWD     E+ DK G       +LGP+YG QWR +      
Sbjct: 69  LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 128

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  IDQ+  ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV     
Sbjct: 129 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 188

Query: 156 ---NGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
              +GK  LSC LYQRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y 
Sbjct: 189 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 248

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H +    Q++R+PR  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 249 DHIDALKEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 302


>gi|294441237|gb|ADE75020.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 639

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 125/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I ++  F   DFT+ +Y  H  I
Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 633


>gi|83578104|ref|NP_014717.2| Cdc21p [Saccharomyces cerevisiae S288c]
 gi|136618|sp|P06785|TYSY_YEAST RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName:
           Full=Cell division cycle protein 21; AltName:
           Full=Constitutive RNR3 transcription protein 9
 gi|172990|gb|AAA60940.1| thymidylate synthase [Saccharomyces cerevisiae]
 gi|2104886|emb|CAA94559.1| YOR29-25 [Saccharomyces cerevisiae]
 gi|190407409|gb|EDV10676.1| thymidylate synthase [Saccharomyces cerevisiae RM11-1a]
 gi|256270905|gb|EEU06037.1| Cdc21p [Saccharomyces cerevisiae JAY291]
 gi|285814960|tpg|DAA10853.1| TPA: Cdc21p [Saccharomyces cerevisiae S288c]
 gi|323352068|gb|EGA84605.1| Cdc21p [Saccharomyces cerevisiae VL3]
          Length = 304

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 140/294 (47%), Positives = 180/294 (61%), Gaps = 31/294 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59
            QYLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV  + ++ EL
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------ 101
           LWFL GD++ + L   GV IWD     E+ DK G       +LGP+YG QWR +      
Sbjct: 71  LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  IDQ+  ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV     
Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190

Query: 156 ---NGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
              +GK  LSC LYQRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y 
Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H +    Q++R+PR  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 251 DHIDALKEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304


>gi|166164563|gb|ABY83780.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 620

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 125/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 619


>gi|166164543|gb|ABY83770.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
 gi|166164545|gb|ABY83771.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 639

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 125/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I ++  F   DFT+ +Y  H  I
Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 633


>gi|15809582|gb|AAK55761.1| dihydrofolate reductase/thymidylate synthase [Plasmodium
           gallinaceum]
          Length = 589

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 127/277 (45%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  VI  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 307 YQYLNIIYDVIMNGNKQGDRTGVGVVSKFGYMMKFNLNQYFPLLTTKKLFIRGIIEELLW 366

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADKD-------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+     E+ DK         +LGPIYG QWR +        
Sbjct: 367 FIRGETNGNTLLNKNVRIWEANGTREFLDKRKLFDREVNDLGPIYGFQWRHFGAEYTNMH 426

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFYV + KLSC
Sbjct: 427 DNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYVFDNKLSC 486

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +    QL+
Sbjct: 487 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKKQLN 546

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F+  DFT+ +Y  H  I
Sbjct: 547 RIPYPFPTLKLNPDIKNIEDFKVSDFTIENYVHHDKI 583


>gi|166164547|gb|ABY83772.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
 gi|294441239|gb|ADE75021.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 639

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 125/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I ++  F   DFT+ +Y  H  I
Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 633


>gi|109706879|gb|ABG43014.1| thymidilate synthase [Candida glabrata]
 gi|109706881|gb|ABG43015.1| thymidilate synthase [Candida glabrata]
 gi|109706883|gb|ABG43016.1| thymidilate synthase [Candida glabrata]
          Length = 298

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 139/289 (48%), Positives = 179/289 (61%), Gaps = 27/289 (9%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           QYLDL   +IK G  R DRTG GT S F   Q+RF L    FPLLTTKKV  K ++ ELL
Sbjct: 10  QYLDLCERIIKEGEFRPDRTGTGTYSLFAPPQLRFSLKDDTFPLLTTKKVFTKGIILELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------- 101
           WF+ G ++   L   GV IW+     E+ DK       +G+LGP+YG QWR +       
Sbjct: 70  WFIAGCTDAKKLSDQGVKIWEGNGSREYLDKMGFVDRREGDLGPVYGFQWRHFGAEYKTC 129

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---NG 157
             DY G  +DQ+  ++  L+ +PY RR I+SAWN     KMALPPCH   QFYV+   +G
Sbjct: 130 EDDYTGQGVDQLKEVIHKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFSQFYVNFPKDG 189

Query: 158 K--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
           K  LSC LYQRS D+ LG+PFNIASY+LLT M+A V   + GEFIHTLGD H+Y +H + 
Sbjct: 190 KPQLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVCDMEPGEFIHTLGDAHVYKDHVDA 249

Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              Q+SR+PR  P++ IN  + D+  F++EDF L  Y+PH  I   +SV
Sbjct: 250 LKEQISRTPRDFPKLRINRKVSDIDDFKFEDFVLEEYDPHPRIQMNMSV 298


>gi|166164549|gb|ABY83773.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 641

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 125/277 (45%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 359 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 418

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 419 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 478

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 479 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 538

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 539 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 598

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I ++  F   DFT+ +Y  H  I
Sbjct: 599 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 635


>gi|166164557|gb|ABY83777.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 620

 Score =  258 bits (660), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 125/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREANDLGPIYGFQWRHFGAEYTNMY 465

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLT 585

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 586 RIPYPFPTLKLNPEIKNVEDFTISDFTIENYVHH 619


>gi|66356564|ref|XP_625460.1| dihydrofolate reductase-thymidylate synthase [Cryptosporidium
           parvum Iowa II]
 gi|46226446|gb|EAK87446.1| dihydrofolate reductase-thymidylate synthase [Cryptosporidium
           parvum Iowa II]
          Length = 531

 Score =  258 bits (660), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 129/283 (45%), Positives = 182/283 (64%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  +S+  EL+WF
Sbjct: 249 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 308

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++GD+N ++L    V IW      E+ ++ G       +LGPIYG QWR +         
Sbjct: 309 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 368

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 369 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 428

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 429 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 488

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I  +++V
Sbjct: 489 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMEMAV 531


>gi|166164555|gb|ABY83776.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 620

 Score =  258 bits (660), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 125/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 619


>gi|145567020|gb|ABP81860.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
          Length = 621

 Score =  258 bits (660), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 459 ANYENKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I ++  F   DFT+++Y  H  I
Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKI 615


>gi|255724850|ref|XP_002547354.1| thymidylate synthase [Candida tropicalis MYA-3404]
 gi|240135245|gb|EER34799.1| thymidylate synthase [Candida tropicalis MYA-3404]
          Length = 303

 Score =  258 bits (660), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 139/292 (47%), Positives = 179/292 (61%), Gaps = 31/292 (10%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           YLDL   +IK G  R DRTG GT+S F   Q+RFDLS   FPLLTTKKV  K ++HELLW
Sbjct: 12  YLDLCERIIKEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ G ++   L   GV IW+     E+ DK       +G+LGP+YG QWR +        
Sbjct: 72  FIAGSTDAKILTNKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKDCD 131

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-----N 156
            DY G   DQ+  I++ L+ +PY RR I+SAWN    DKMALPPCH   QFYV+      
Sbjct: 132 ADYTGQGYDQLQDIIKKLKTNPYDRRIIMSAWNPPDFDKMALPPCHVFCQFYVNFPENAK 191

Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
            KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+    GEFIHT+GD H+Y +H +  
Sbjct: 192 PKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTMGDAHVYLDHVDAL 251

Query: 217 DLQLSRSPRTLPQMIINPNIVDLLS----FRYEDFTLRSYEPHAAILAKVSV 264
             QL R P+  P+++I  +  D +     F +EDF +  YEP+  I  K+SV
Sbjct: 252 KEQLERIPKQFPKLVIKEDRKDEIKSIDDFEFEDFQIVGYEPYPPIKMKMSV 303


>gi|156345471|ref|XP_001621374.1| hypothetical protein NEMVEDRAFT_v1g145132 [Nematostella vectensis]
 gi|156207232|gb|EDO29274.1| predicted protein [Nematostella vectensis]
          Length = 210

 Score =  258 bits (659), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 120/210 (57%), Positives = 152/210 (72%)

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
           ++ ELLWFLRGDSNV +L   G +IW+EWA +DG+LGP+YGVQWR+WP  DG  IDQI+ 
Sbjct: 1   IILELLWFLRGDSNVRWLQERGCTIWNEWAREDGDLGPVYGVQWRNWPTPDGGHIDQIAE 60

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
           +V+ L+++P SRR IVSAWNVA + +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+
Sbjct: 61  VVKQLKSNPDSRRIIVSAWNVADLPQMALMPCHAFFQFYVADGKLSCQLYQRSADIFLGV 120

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT MLA     Q G+F+ T GD H+YNNHF Q + QL+R P   P + I  
Sbjct: 121 PFNIASYALLTHMLAQQCDLQVGDFVWTGGDCHIYNNHFAQVETQLARQPFAYPTLQIKR 180

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               +  + YEDF +  Y+ H  I A V+V
Sbjct: 181 RPDSIFGYEYEDFEVVGYQHHEPIKAPVAV 210


>gi|225717296|gb|ACO14494.1| Thymidylate synthase [Esox lucius]
          Length = 319

 Score =  258 bits (659), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 125/281 (44%), Positives = 173/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+   ++++ G  + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 39  YLNQCEYILQHGHRKGDRTGTGVISVFGSQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103
           +G +N   L   GV IWD    +D            G+LGP+YG QW  +         D
Sbjct: 99  KGSTNAKGLSEKGVKIWDANGSRDFLDKMGFTDREEGDLGPVYGFQWWHFGAEYSNMHTD 158

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+ +++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV +G+LSCQL
Sbjct: 159 YTGKGVDQLQNVIDTIKTNPEDRRIIMCAWNPKDLPHMALPPCHALCQFYVIDGELSCQL 218

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R 
Sbjct: 219 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYINHVEPLKVQLQRE 278

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R  P++ I   +  +  FR EDF +  Y PH  I  +++V
Sbjct: 279 IRPFPKLKILRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 319


>gi|296422006|ref|XP_002840554.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636772|emb|CAZ84745.1| unnamed protein product [Tuber melanosporum]
          Length = 306

 Score =  258 bits (659), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 134/291 (46%), Positives = 184/291 (63%), Gaps = 28/291 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-GFPLLTTKKVHWKSVVHEL 59
           +QYLDL+R+++  G  R DRTG GT S F   Q+RF+L    FPLLTTK++  K+++HEL
Sbjct: 16  YQYLDLVRNILTNGEHRPDRTGTGTISLFAPPQLRFNLKNHTFPLLTTKRLFHKAILHEL 75

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------ 101
           LWF+ G ++ + L   GV IW+    +            +G+LGP+YG QWR +      
Sbjct: 76  LWFISGSTSNAPLSAVGVKIWEGNGSRAYLDSIGLTERAEGDLGPVYGFQWRHFGAKYVD 135

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ++ ++  L+ +PY RR I+SAWN A + KMALPPCH   QFYV     
Sbjct: 136 CHTDYSGQGVDQLADVIYKLKNNPYDRRIIMSAWNPADLAKMALPPCHMFAQFYVSYKEG 195

Query: 156 --NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
              G LSC LYQRS D+ LG+PFNIASY+LLT+M+A V G + GEFIHT+GD H+Y +H 
Sbjct: 196 KGMGALSCVLYQRSCDMGLGVPFNIASYALLTIMIAHVCGLEPGEFIHTMGDAHVYADHA 255

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +    QL R+PR  P + IN  + D+  F++EDF L  Y+PH +I   +SV
Sbjct: 256 DALKGQLERAPREFPTLKINRQVDDIDDFKFEDFELVGYDPHPSIKMNMSV 306


>gi|323335494|gb|EGA76779.1| Cdc21p [Saccharomyces cerevisiae Vin13]
 gi|323346516|gb|EGA80803.1| Cdc21p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 304

 Score =  258 bits (659), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 140/294 (47%), Positives = 179/294 (60%), Gaps = 31/294 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59
            QYLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV  + ++ EL
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------ 101
           LWFL GD++ + L   GV IWD     E+ DK G       +LGP+YG QWR +      
Sbjct: 71  LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  IDQ+  ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV     
Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190

Query: 156 ---NGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
              +GK  LSC LYQRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y 
Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H +    Q+ R+PR  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 251 DHIDALKEQIXRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304


>gi|145567024|gb|ABP81862.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           brasilianum]
          Length = 621

 Score =  258 bits (658), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I ++  F   DFT+++Y  H  I
Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKI 615


>gi|136615|sp|P13100|TYSY_PNECA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|7767148|pdb|1CI7|A Chain A, Ternary Complex Of Thymidylate Synthase From Pneumocystis
           Carinii
 gi|7767149|pdb|1CI7|B Chain B, Ternary Complex Of Thymidylate Synthase From Pneumocystis
           Carinii
 gi|14488434|pdb|1F28|A Chain A, Crystal Structure Of Thymidylate Synthase From
           Pneumocystis Carinii Bound To Dump And Bw1843u89
 gi|14488435|pdb|1F28|B Chain B, Crystal Structure Of Thymidylate Synthase From
           Pneumocystis Carinii Bound To Dump And Bw1843u89
 gi|14488436|pdb|1F28|C Chain C, Crystal Structure Of Thymidylate Synthase From
           Pneumocystis Carinii Bound To Dump And Bw1843u89
 gi|14488437|pdb|1F28|D Chain D, Crystal Structure Of Thymidylate Synthase From
           Pneumocystis Carinii Bound To Dump And Bw1843u89
 gi|169430|gb|AAA33802.1| thymidylate synthase [Pneumocystis carinii]
          Length = 297

 Score =  258 bits (658), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 133/291 (45%), Positives = 185/291 (63%), Gaps = 28/291 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDL-SKGFPLLTTKKVHWKSVVHEL 59
            QYL+L++++I  G DR DRTG GT S F    ++F L +K FPLLTTK+V  + V+ EL
Sbjct: 7   QQYLNLVQYIINHGEDRPDRTGTGTLSVFAPSPLKFSLRNKTFPLLTTKRVFIRGVIEEL 66

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101
           LWF+RG+++   L    + IWD     E+ D       ++G+LGPIYG QWR +      
Sbjct: 67  LWFIRGETDSLKLREKNIHIWDANGSREYLDSIGLTKRQEGDLGPIYGFQWRHFGAEYID 126

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              +Y G  +DQ+++I+Q +R  PY RR I+SAWN A ++KMALPPCH   QFYV     
Sbjct: 127 CKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALPPCHMFCQFYVHIPSN 186

Query: 156 --NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
               +LSCQLYQRS D+ LG+PFNIASY+LLT M+A V     G+FIH +GD H+Y +H 
Sbjct: 187 NHRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVMGDCHIYKDHI 246

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           E    QL+RSPR  P + +N +I D+  F  +DF +++Y P+  I  K+S+
Sbjct: 247 EALQQQLTRSPRPFPTLSLNRSITDIEDFTLDDFNIQNYHPYETIKMKMSI 297


>gi|30749344|pdb|1J3I|C Chain C, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase-
           Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210,
           Nadph, And Dump
 gi|30749345|pdb|1J3I|D Chain D, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase-
           Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210,
           Nadph, And Dump
 gi|30749348|pdb|1J3J|C Chain C, Double Mutant (C59r+s108n) Plasmodium Falciparum
           Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts)
           Complexed With Pyrimethamine, Nadph, And Dump
 gi|30749349|pdb|1J3J|D Chain D, Double Mutant (C59r+s108n) Plasmodium Falciparum
           Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts)
           Complexed With Pyrimethamine, Nadph, And Dump
 gi|30749352|pdb|1J3K|C Chain C, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate Synthase
           (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump
 gi|30749353|pdb|1J3K|D Chain D, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate Synthase
           (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump
 gi|222143068|pdb|3DG8|C Chain C, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate Synthase
           (Pfdhfr-Ts) Complexed With Rjf670, Nadph, And Dump
 gi|222143069|pdb|3DG8|D Chain D, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate Synthase
           (Pfdhfr-Ts) Complexed With Rjf670, Nadph, And Dump
 gi|222143072|pdb|3DGA|C Chain C, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase-
           Thymidylate Synthase (Pfdhfr-Ts) Complexed With
           Rjf01302, Nadph, And Dump
 gi|222143073|pdb|3DGA|D Chain D, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase-
           Thymidylate Synthase (Pfdhfr-Ts) Complexed With
           Rjf01302, Nadph, And Dump
          Length = 328

 Score =  258 bits (658), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 179/277 (64%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 46  YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 105

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 106 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 165

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 166 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 225

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 226 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 285

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 286 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 322


>gi|115299508|gb|ABI93724.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
          Length = 369

 Score =  258 bits (658), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 131/266 (49%), Positives = 170/266 (63%), Gaps = 21/266 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLD++R ++K G  + DRTGVGT S FG  MRF+L++ FPLLTTKKV ++ VV ELLW
Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGVVEELLW 163

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101
           FLRGD+N   L   GV IW+     E+ D  G       +LGP+YG QWR +        
Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY+   +DQ+  ++Q L+ +P SRR I+SAWN + + +MALPPCH + QF+V NGKLSC
Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQMALPPCHVMSQFFVANGKLSC 283

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D  LGIPFNIASY+LLT MLA       GEF+H LGD H+Y+NH +    Q+ 
Sbjct: 284 MMYQRSCDFGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDF 247
           R P   P + I      L  + YEDF
Sbjct: 344 RVPYPFPILKIKSK-KSLFDYTYEDF 368


>gi|225458199|ref|XP_002281129.1| PREDICTED: similar to Bifunctional dihydrofolate
           reductase-thymidylate synthase [Vitis vinifera]
          Length = 580

 Score =  258 bits (658), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 130/281 (46%), Positives = 171/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL  L+ +I  G+ + D+TG GT S FG QMRF+L   FPLLTTK+V W+ VV ELLWF+
Sbjct: 300 YLRQLKEIISSGAHKADKTGTGTVSKFGCQMRFNLRLSFPLLTTKRVFWRGVVEELLWFI 359

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103
            G +N   L +  + IWD     E+ D       ++G+LGPIYG QWR +         D
Sbjct: 360 SGSTNAKVLQKKDIHIWDGNASREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTNMHAD 419

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++  P  RR I+S+WN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 420 YMGKGFDQLLDVIDKIKNKPDDRRIILSSWNPSDLKLMALPPCHMFAQFYVANGELSCQM 479

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT M+A V G   G+FI  +GD H+Y  H    + QL + 
Sbjct: 480 YQRSADMGLGVPFNIASYALLTCMIAHVCGILPGDFILIIGDAHIYKTHIRPLEEQLQKL 539

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   D+ SF   DF L  Y PH  I  K+SV
Sbjct: 540 PKPFPILKINPQKKDIESFVAADFELIGYNPHQKIEMKMSV 580


>gi|255543751|ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Ricinus communis]
 gi|223547949|gb|EEF49441.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Ricinus communis]
          Length = 528

 Score =  258 bits (658), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 130/281 (46%), Positives = 170/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L++ +I  G  + DRTG GT S FG Q+RF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 248 YLRLVQEIISDGILKDDRTGTGTLSKFGCQVRFNLRKTFPLLTTKKVFWRGVVEELLWFI 307

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD  A +D            G+LGP+YG QWR +         D
Sbjct: 308 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKNREEGDLGPVYGFQWRHFGARYTDMHAD 367

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  +V  ++ +P  RR I+SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 368 YTGQGFDQLLDVVNKIKNNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 427

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY LLT ++A V     G+F+H +GD H+Y  H      QL + 
Sbjct: 428 YQRSADMGLGVPFNIASYGLLTCIIAHVCDLVPGDFVHVIGDTHVYRTHVRPLQEQLQKL 487

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   ++ SF   DF L  Y+PH  I  K++V
Sbjct: 488 PKPFPILKINPEKKNIDSFVAADFKLIGYDPHHKIEMKMAV 528


>gi|62240520|gb|AAX77434.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
 gi|62240522|gb|AAX77435.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
 gi|145700343|gb|ABP94173.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
 gi|145700345|gb|ABP94174.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
 gi|145700347|gb|ABP94175.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
          Length = 621

 Score =  258 bits (658), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I ++  F   DFT+++Y  H  I
Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKI 615


>gi|297342898|pdb|3HJ3|A Chain A, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site
           Mut
 gi|297342899|pdb|3HJ3|B Chain B, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site
           Mut
 gi|297342900|pdb|3HJ3|C Chain C, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site
           Mut
 gi|297342901|pdb|3HJ3|D Chain D, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site
           Mut
          Length = 521

 Score =  258 bits (658), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 129/283 (45%), Positives = 181/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  +S+  EL+WF
Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++GD+N ++L    V IW      E+ ++ G       +LGPIYG QWR +         
Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I   ++V
Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521


>gi|67594753|ref|XP_665866.1| chain A, crystal structure of Dhfr [Cryptosporidium hominis TU502]
 gi|39654756|pdb|1QZF|A Chain A, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis
 gi|39654757|pdb|1QZF|B Chain B, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis
 gi|39654758|pdb|1QZF|C Chain C, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis
 gi|39654759|pdb|1QZF|D Chain D, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis
 gi|39654760|pdb|1QZF|E Chain E, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis
 gi|49258971|pdb|1SEJ|A Chain A, Crystal Structure Of Dihydrofolate Reductase-Thymidylate
           Synthase From Cryptosporidium Hominis Bound To
           1843u89NADPHDUMP
 gi|49258972|pdb|1SEJ|B Chain B, Crystal Structure Of Dihydrofolate Reductase-Thymidylate
           Synthase From Cryptosporidium Hominis Bound To
           1843u89NADPHDUMP
 gi|49258973|pdb|1SEJ|C Chain C, Crystal Structure Of Dihydrofolate Reductase-Thymidylate
           Synthase From Cryptosporidium Hominis Bound To
           1843u89NADPHDUMP
 gi|49258974|pdb|1SEJ|D Chain D, Crystal Structure Of Dihydrofolate Reductase-Thymidylate
           Synthase From Cryptosporidium Hominis Bound To
           1843u89NADPHDUMP
 gi|49258975|pdb|1SEJ|E Chain E, Crystal Structure Of Dihydrofolate Reductase-Thymidylate
           Synthase From Cryptosporidium Hominis Bound To
           1843u89NADPHDUMP
 gi|1480451|gb|AAC47230.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Cryptosporidium parvum]
 gi|54656722|gb|EAL35637.1| chain A, crystal structure of Dhfr [Cryptosporidium hominis]
          Length = 521

 Score =  258 bits (658), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 129/283 (45%), Positives = 181/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  +S+  EL+WF
Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++GD+N ++L    V IW      E+ ++ G       +LGPIYG QWR +         
Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I   ++V
Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521


>gi|22788864|ref|NP_690528.1| thymidylate synthase [Heliothis zea virus 1]
 gi|20452159|gb|AAM22072.1|AF264019_1 thymidylate synthase [Heliothis zea virus 1]
          Length = 291

 Score =  257 bits (657), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 126/284 (44%), Positives = 176/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60
           HQYL+ +R +I+ G+ R DRT VGT S FG   R+ L     PLLTTK V  K V+ ELL
Sbjct: 8   HQYLNTIRSIIETGNRRMDRTKVGTLSHFGVMHRYSLRDNSLPLLTTKTVFVKGVIEELL 67

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR--------S 100
           W + G +N   L R GV IW   + +            +G+LGP+YG QWR         
Sbjct: 68  WMISGSTNAKELSRKGVHIWSGNSSRSVLDSLGFTDRQEGDLGPVYGFQWRHSGTKYVDC 127

Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+ +I+ +L+ +P  RR ++ +WN A + +MALPPCHCL QFY  +GKLS
Sbjct: 128 ETDYSGQGVDQLQTIIDTLKTNPTDRRIVMCSWNPADLHQMALPPCHCLAQFYSYDGKLS 187

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C +YQRS D+ LG+PFNIASYS+LT M+A + G +  EF+HT+GD H+Y NH E   +QL
Sbjct: 188 CLMYQRSADMGLGVPFNIASYSMLTHMIAHITGLKAHEFVHTIGDAHVYLNHIEPLKVQL 247

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++     + ++ SF+YEDF ++ Y+P+  I   ++V
Sbjct: 248 EREPRPFPKLEFARKVENIDSFKYEDFIIKGYDPYPKIPMVLAV 291


>gi|326692446|ref|ZP_08229451.1| thymidylate synthase [Leuconostoc argentinum KCTC 3773]
          Length = 322

 Score =  257 bits (657), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 133/317 (41%), Positives = 179/317 (56%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + ++  G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAQKILAEGNLKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 66  FLRGDNNIRFLLQHNNHIWDEWAFKNWVESNDYTGPDMTNFGHRAETDSEFAAVYQAQKA 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADPYSRR 127
                        +K G +G +YG  WR W           +DQ++ +V+ ++  P SRR
Sbjct: 126 IFVDKILNDDAFMEKFGYVGDVYGKLWRGWETSSVTAGTETVDQVARLVEEIKTTPDSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNADTTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ G+F+HT+GD H+YNNH +Q   QLSR    LP++ +NP++  +  +  +D 
Sbjct: 246 MAAQTGYEVGDFVHTIGDTHIYNNHVDQITEQLSRPMHPLPKLWLNPDVKSIFDYTMDDI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  YE  A I A V+V
Sbjct: 306 KVLDYESEAPIKAPVAV 322


>gi|166164569|gb|ABY83783.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 124/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVREIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621


>gi|166164559|gb|ABY83778.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 620

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 125/274 (45%), Positives = 175/274 (63%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++  P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 466 DNYDNKGIDQLKNIINLIKNGPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 619


>gi|84996883|ref|XP_953163.1| bifunctional dihydrofolate reductase/thymidilate synthase
           [Theileria annulata strain Ankara]
 gi|65304159|emb|CAI76538.1| bifunctional dihydrofolate reductase/thymidilate synthase, putative
           [Theileria annulata]
          Length = 523

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 123/281 (43%), Positives = 179/281 (63%), Gaps = 20/281 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL++L  ++  G  +++RTGV   + FGYQMRFDLS+ FPLLTTKKV  + ++ EL+WF
Sbjct: 242 QYLEILADILNNGYHKKNRTGVDCIAKFGYQMRFDLSQSFPLLTTKKVFLRGIIEELIWF 301

Query: 63  LRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSW--------P 102
           +RG +N + L +  V IW+             +  ++ +LGP+YG QWR +         
Sbjct: 302 IRGSTNGNELLKKNVRIWELNGARSFLDNLGFYDREEQDLGPVYGFQWRHFGAKYIDMHA 361

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY    IDQ+S +++ ++ +P +RR IV +WNVA + KMALPPCH LFQF+V +G LSC 
Sbjct: 362 DYTDQGIDQLSLVIERIKNNPDNRRLIVCSWNVADLSKMALPPCHLLFQFFVADGTLSCM 421

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYSLLT M+A + G + GEF+H LGD H+YNNH +    Q+SR
Sbjct: 422 MHQRSCDMGLGVPFNIASYSLLTYMIAHICGLKPGEFVHNLGDAHIYNNHIDAIKEQISR 481

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            P   P + +N  I  +  F  +D  + +Y  H  I  +++
Sbjct: 482 VPYPFPTLKLNKEITRIEDFTIDDIKVENYRCHPLIKMEMA 522


>gi|197107400|pdb|3DL5|A Chain A, Crystal Structure Of The A287f Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|197107401|pdb|3DL5|B Chain B, Crystal Structure Of The A287f Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|197107402|pdb|3DL5|C Chain C, Crystal Structure Of The A287f Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|197107403|pdb|3DL5|D Chain D, Crystal Structure Of The A287f Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|197107404|pdb|3DL5|E Chain E, Crystal Structure Of The A287f Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
          Length = 521

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 129/283 (45%), Positives = 181/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  +S+  EL+WF
Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVFIRSIFEELIWF 298

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++GD+N ++L    V IW      E+ ++ G       +LGPIYG QWR +         
Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I   ++V
Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521


>gi|166164577|gb|ABY83787.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 124/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621


>gi|71028992|ref|XP_764139.1| dihydrofolate reductase-thymidylate synthase [Theileria parva
           strain Muguga]
 gi|68351093|gb|EAN31856.1| dihydrofolate reductase-thymidylate synthase, putative [Theileria
           parva]
          Length = 522

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL++L  ++  G  +++RTGV   + FGYQMRFDLS+ FPLLTTKKV  + ++ EL+WF
Sbjct: 241 QYLEILADILNTGYHKKNRTGVDCIAKFGYQMRFDLSESFPLLTTKKVFLRGIIEELIWF 300

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++G +N + L +  V IW+      + D  G       +LGP+YG QWR +         
Sbjct: 301 IKGSTNGNELLKKNVRIWELNGARSFLDNLGFFDREEHDLGPVYGFQWRHFGAKYVDMHT 360

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY    IDQ+S ++  ++ +P +RR IV +WNVA + KMALPPCH LFQF+V +G LSC 
Sbjct: 361 DYSNQGIDQLSLVIDRIKNNPDNRRLIVCSWNVADLSKMALPPCHLLFQFFVADGTLSCM 420

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYSLLT M+A + G + GEF+H LGD H+YNNH +    Q+SR
Sbjct: 421 MHQRSCDMGLGVPFNIASYSLLTYMIAQICGLKPGEFVHNLGDAHIYNNHIDAIKEQISR 480

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P   P + +N +I  +  F  +D  + +Y  H  I  +++ 
Sbjct: 481 VPYPFPTLRLNKDITRIEDFTIDDIKVENYRSHPVIKMEMAA 522


>gi|166164573|gb|ABY83785.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 124/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621


>gi|50302825|ref|XP_451349.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640480|emb|CAH02937.1| KLLA0A07843p [Kluyveromyces lactis]
          Length = 312

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 136/292 (46%), Positives = 176/292 (60%), Gaps = 29/292 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL   +I  G  R DRTG GT S F   Q+RF+LS   FPLLTTK+V  K ++ EL
Sbjct: 21  QQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIILEL 80

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101
           LWF+ G ++   L   GV IW+     E+ D       ++G+LGP+YG QWR +      
Sbjct: 81  LWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYKT 140

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ+  I+  L+ +PY RR I+SAWN     KMALPPCH   QFYV     
Sbjct: 141 CDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSFPKG 200

Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                +LSC LYQRS D+ LG+PFNIASY+LLT M+A V   + GEFIHTLGD H+Y +H
Sbjct: 201 EGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVYKDH 260

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +    Q++R PR  P++ I  N+ D+  F+YEDF +  Y PH  I  K+SV
Sbjct: 261 VDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEITDYNPHGKIQMKMSV 312


>gi|1093364|prf||2103303A dihydrofolate reductase/thymidylate synthase
          Length = 521

 Score =  257 bits (656), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 130/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRRFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ L +PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 418 CMLYQRSCDMGLAVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++       L  +   D  +  Y P+  I  K++V
Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521


>gi|166164575|gb|ABY83786.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  257 bits (656), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 124/274 (45%), Positives = 176/274 (64%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621


>gi|330719294|ref|ZP_08313894.1| thymidylate synthase [Leuconostoc fallax KCTC 3537]
          Length = 324

 Score =  257 bits (656), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 178/319 (55%), Gaps = 56/319 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + +++ G+ + DRTG GTRS FG QMRF+L +GFP+LTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAKTILETGTHKSDRTGTGTRSLFGAQMRFNLQEGFPILTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L ++   IWDEWA                                     
Sbjct: 66  FLRGDNNIRFLLQNNNHIWDEWAFKNWVTSSEYTGPDMTDFGLRAQSDPEFNQIYQEQKS 125

Query: 85  -------------DKDGELGPIYGVQWRSWPD---YDGNVI---DQISSIVQSLRADPYS 125
                        +K G +G +YG  WR W +    D N     DQI +++  ++  P S
Sbjct: 126 LFVDKILNDDDFMEKFGYIGEVYGKLWRDWENQDPMDQNATLHTDQIQNLIDGIKTTPDS 185

Query: 126 RRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLT 185
           RR IVSAWN        LP CH L QFYV +GKLS QLYQRS D+FLG+PFNIASYSLL 
Sbjct: 186 RRLIVSAWNAGSTPNAPLPSCHVLSQFYVADGKLSAQLYQRSADIFLGVPFNIASYSLLI 245

Query: 186 MMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYE 245
            M+A+  G+  G+F+HTLGD H+YNNH  Q + QLSR    LP++ +NP +  +  +  +
Sbjct: 246 HMIAAQTGYAVGDFVHTLGDAHIYNNHVAQIETQLSRPMHPLPKLWLNPEVKSIFDYTMD 305

Query: 246 DFTLRSYEPHAAILAKVSV 264
           D  L  Y    AI A V+V
Sbjct: 306 DIKLIDYTSEPAIKAPVAV 324


>gi|302142537|emb|CBI19740.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  257 bits (656), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 130/281 (46%), Positives = 171/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL  L+ +I  G+ + D+TG GT S FG QMRF+L   FPLLTTK+V W+ VV ELLWF+
Sbjct: 189 YLRQLKEIISSGAHKADKTGTGTVSKFGCQMRFNLRLSFPLLTTKRVFWRGVVEELLWFI 248

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103
            G +N   L +  + IWD     E+ D       ++G+LGPIYG QWR +         D
Sbjct: 249 SGSTNAKVLQKKDIHIWDGNASREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTNMHAD 308

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++  P  RR I+S+WN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 309 YMGKGFDQLLDVIDKIKNKPDDRRIILSSWNPSDLKLMALPPCHMFAQFYVANGELSCQM 368

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT M+A V G   G+FI  +GD H+Y  H    + QL + 
Sbjct: 369 YQRSADMGLGVPFNIASYALLTCMIAHVCGILPGDFILIIGDAHIYKTHIRPLEEQLQKL 428

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   D+ SF   DF L  Y PH  I  K+SV
Sbjct: 429 PKPFPILKINPQKKDIESFVAADFELIGYNPHQKIEMKMSV 469


>gi|145567018|gb|ABP81859.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
          Length = 621

 Score =  257 bits (656), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 176/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I  +  F   DFT+++Y  H  I
Sbjct: 579 RIPYPFPTLKLNPEIKSIEDFTISDFTIQNYVHHDKI 615


>gi|146412684|ref|XP_001482313.1| thymidylate synthase [Meyerozyma guilliermondii ATCC 6260]
 gi|146393077|gb|EDK41235.1| thymidylate synthase [Meyerozyma guilliermondii ATCC 6260]
          Length = 302

 Score =  256 bits (655), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/292 (46%), Positives = 181/292 (61%), Gaps = 31/292 (10%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-GFPLLTTKKVHWKSVVHELLW 61
           YLDL  H+I  G  R DRTG GT+S F   Q+RFDLS   FPLLTTKKV  K+++HELLW
Sbjct: 11  YLDLCSHIITHGEHRPDRTGTGTKSVFAPPQLRFDLSNDSFPLLTTKKVFSKAIIHELLW 70

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ GD++ ++L   GV IW+     E+ DK        G+LGP+YG QWR +        
Sbjct: 71  FVAGDTDANHLSEKGVKIWEGNGSREYLDKLGLTDRRVGDLGPVYGFQWRHFGAQYKTCD 130

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---DNG- 157
            +Y G   DQ+  +++ L+ +PY RR I+SAWN     +MALPPCH   QFYV   D G 
Sbjct: 131 DNYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAQMALPPCHVFCQFYVSFPDAGR 190

Query: 158 -KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
            KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++    GEFIHT+GD H+YN+H +  
Sbjct: 191 PKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIHTMGDAHVYNDHIDAL 250

Query: 217 DLQLSRSPRTLPQMIINPN----IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             QL R+PR  P++ I       I  +  F + DF +  Y+P+  I  K+SV
Sbjct: 251 KEQLQRTPREFPKLYIKEERKHQITSIDDFTFSDFEIVDYDPYGPIKMKMSV 302


>gi|68073909|ref|XP_678869.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Plasmodium berghei strain ANKA]
 gi|56499470|emb|CAH97634.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Plasmodium berghei]
          Length = 585

 Score =  256 bits (655), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 126/276 (45%), Positives = 180/276 (65%), Gaps = 20/276 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+++ DRTG G  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 305 YQYLNIIYDMIMHGNNQDDRTG-GVLSKFGYMMKFNLNEYFPLLTTKKLFIRGIIEELLW 363

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADKD------GELGPIYGVQWRSW--------P 102
           F+RG++N + L    V IW+     E+ D+        +LGPIYG QWR +         
Sbjct: 364 FIRGETNGNTLLEKNVRIWEANGTREFLDRKLFHREVNDLGPIYGFQWRHFGAEYTDMHD 423

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y    +DQ+ +I+  ++ DP  RR I+ AWNV  +D+MALPPCH L QFYV +GKLSC 
Sbjct: 424 NYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSCI 483

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH E   +QL+R
Sbjct: 484 MYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQAAEFIHVLGNAHVYNNHIESLKIQLNR 543

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           +P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 544 TPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKI 579


>gi|304404471|ref|ZP_07386132.1| thymidylate synthase [Paenibacillus curdlanolyticus YK9]
 gi|304346278|gb|EFM12111.1| thymidylate synthase [Paenibacillus curdlanolyticus YK9]
          Length = 281

 Score =  256 bits (655), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/281 (44%), Positives = 172/281 (61%), Gaps = 50/281 (17%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWA--------- 84
           MRFDL++GFPLLTTK++ ++ +V ELLWF++GD+N+ YL +H  +IW+EWA         
Sbjct: 1   MRFDLNEGFPLLTTKRIPFRLIVSELLWFMKGDTNIRYLLQHNNNIWNEWAFKRWVESAS 60

Query: 85  ---------------DKD--------------------------GELGPIYGVQWRSWPD 103
                          D+D                          GELG +YG QWR+W  
Sbjct: 61  YEGPDMANFGLRSQTDEDFAASYTEQMNRFKELVLTDDAFAAQFGELGDVYGKQWRAWQT 120

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
             G+ +DQ+  +++ ++ +P SRR IVSAWN   I  MALPPCH LFQFYV +GKLSCQL
Sbjct: 121 TKGDTLDQLHDVIEMIKRNPDSRRLIVSAWNPEDIPLMALPPCHTLFQFYVADGKLSCQL 180

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+FLGIPFNIASY+LLT ++A   G   GEF+HTLGD H+Y NH +Q   QL+R+
Sbjct: 181 YQRSADIFLGIPFNIASYALLTHLIARECGLAVGEFVHTLGDAHIYTNHMDQIQEQLARA 240

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++LP++ ++ +   +     ED  +  Y+PH  I A V+V
Sbjct: 241 PKSLPKLELSGDWTSVFDAEVEDIAVEGYDPHPTIKAPVAV 281


>gi|224080379|ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
 gi|222849082|gb|EEE86629.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
          Length = 528

 Score =  256 bits (654), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 127/281 (45%), Positives = 174/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL +++ +I  G+ + DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 248 YLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFPLLTTKKVFWRGVVEELLWFI 307

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103
            G ++   L   G+ IWD     E+ D       ++G+LGP+YG QWR +         D
Sbjct: 308 SGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGARYTDMHAD 367

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 368 YTGQGFDQLLDVIDKIKNNPNDRRIIISAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 427

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT ++A V     G+F+H +GD H+Y+ H      QL + 
Sbjct: 428 YQRSADMGLGVPFNIASYALLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQEQLRKL 487

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + IN    D+ +F   DF L  Y+PH  I  K++V
Sbjct: 488 PKPFPILKINSEKKDIDTFVAADFKLIGYDPHQKIEMKMAV 528


>gi|283481329|emb|CAZ69445.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Emiliania huxleyi virus 99B1]
          Length = 480

 Score =  256 bits (654), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/277 (45%), Positives = 166/277 (59%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL L+  V++ G  R DRTG GT S FG  MRF+LS  FPLLTTK+ +WK +V ELLW
Sbjct: 198 YQYLQLISKVLEHGEYRSDRTGTGTVSLFGETMRFNLSTHFPLLTTKRTYWKGIVEELLW 257

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG +N + L    V IWD    +D            G+LGP+YG QWR +        
Sbjct: 258 FIRGSTNANELAAKNVKIWDGNGSRDFLDSVGLVDNEEGDLGPVYGFQWRHFGADYKTMH 317

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             YD    DQ+ +++  ++ +P SRR I+SAWN   ++KMALPPCH + QFYV +G LSC
Sbjct: 318 DSYDSQGTDQLQNVIDQIKNNPTSRRIIMSAWNPNALEKMALPPCHIMCQFYVHDGMLSC 377

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT ++A     + GEFIH +GD H+Y NH +    QL 
Sbjct: 378 QMYQRSADIGLGVPFNIASYALLTCLIAHFTNLKPGEFIHVIGDAHVYTNHIDALKTQLK 437

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + IN     +     +D  L  Y+ H  I
Sbjct: 438 RKPYDFPTIHINNMPKTIFDVTSDDIILNDYKCHPKI 474


>gi|312077491|ref|XP_003141327.1| thymidylate synthase [Loa loa]
 gi|307763509|gb|EFO22743.1| thymidylate synthase [Loa loa]
          Length = 305

 Score =  256 bits (654), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 132/284 (46%), Positives = 170/284 (59%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
           ++YLD +RH++K G    DRTGVGT S FG    + L  G  P+LTTK+V+WK VV ELL
Sbjct: 22  NKYLDQIRHILKNGERIDDRTGVGTISVFGMHSVYSLRNGVVPVLTTKRVYWKGVVEELL 81

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WF+RGD+N  +L   GV IWD    +            +G+LGP+YG QWR         
Sbjct: 82  WFIRGDTNAKHLSEKGVRIWDANGSRQFLDQCGFNDRSEGDLGPVYGFQWRHCGAEYRGM 141

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    IDQ+S I+  ++ +P+SRR I+SAWNV  +  M LPPCH L QF V N +LS
Sbjct: 142 DADYTNRGIDQLSEIIDLIKNEPHSRRIILSAWNVKDLKLMVLPPCHTLAQFAVRNDELS 201

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGD+ LG+PFN+ASY LLT M+A + G + G   H LGD H+Y NH +    QL
Sbjct: 202 CQLYQRSGDMGLGVPFNLASYGLLTHMIAHICGLKAGYLCHVLGDAHVYVNHVDALQEQL 261

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PRT P +    NI  +  F YE   L +Y P   I   ++V
Sbjct: 262 RRQPRTFPTVRFVGNIKTIDDFTYESIILENYRPMPTIKMAMAV 305


>gi|115299504|gb|ABI93722.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
          Length = 369

 Score =  256 bits (654), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 130/266 (48%), Positives = 170/266 (63%), Gaps = 21/266 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLD++R ++K G  + DRTGVGT S FG  MRF+L++ FPLLTTKKV ++  V ELLW
Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGAVEELLW 163

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101
           FLRGD+N   L   GV IW+     E+ D  G       +LGP+YG QWR +        
Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY+   +DQ+  ++Q L+ +P SRR I+SAWN + +++MALPPCH + QF+V NGKLSC
Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLEQMALPPCHVMSQFFVANGKLSC 283

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LGIPFNIASY+LLT MLA       GEF+H LGD H+Y+NH +    Q+ 
Sbjct: 284 MMYQRSCDLGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDF 247
           R P   P + I      L    YEDF
Sbjct: 344 RVPYPFPILKIKSQ-KSLFDHTYEDF 368


>gi|73852583|ref|YP_293867.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Emiliania huxleyi virus 86]
 gi|72415299|emb|CAI65536.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Emiliania huxleyi virus 86]
          Length = 480

 Score =  256 bits (654), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/277 (45%), Positives = 166/277 (59%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL L+  V++ G  R DRTG GT S FG  MRF+LS  FPLLTTK+ +WK +V ELLW
Sbjct: 198 YQYLQLISKVLEHGEYRSDRTGTGTVSLFGETMRFNLSTHFPLLTTKRTYWKGIVEELLW 257

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG +N + L    V IWD    +D            G+LGP+YG QWR +        
Sbjct: 258 FIRGSTNANELAAKNVKIWDGNGSRDFLDSVGLVDNEEGDLGPVYGFQWRHFGADYKTMH 317

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             YD    DQ+ +++  ++ +P SRR I+SAWN   ++KMALPPCH + QFYV +G LSC
Sbjct: 318 DSYDSQGTDQLQNVIDQIKNNPTSRRIIMSAWNPNALEKMALPPCHLMCQFYVHDGMLSC 377

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT ++A     + GEFIH +GD H+Y NH +    QL 
Sbjct: 378 QMYQRSADIGLGVPFNIASYALLTCLIAHFTNLKPGEFIHVIGDAHVYTNHIDALKTQLK 437

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + IN     +     +D  L  Y+ H  I
Sbjct: 438 RKPYDFPTIHINNMPKTIFDVTSDDIILNDYKCHPKI 474


>gi|320580614|gb|EFW94836.1| Thymidylate synthase [Pichia angusta DL-1]
          Length = 296

 Score =  256 bits (654), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 133/288 (46%), Positives = 178/288 (61%), Gaps = 27/288 (9%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           YLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV +K ++HELLW
Sbjct: 9   YLDLCQRIISEGEHRPDRTGTGTYSVFAPPQLRFSLKDNKFPLLTTKKVFFKGILHELLW 68

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F+ G+++   L   GV IW+     E+ D       ++G+LGP+YG QWR +        
Sbjct: 69  FIAGETDAKKLTEKGVKIWEGNGSREYLDSLGLTHRREGDLGPVYGFQWRHFGAEYVDCD 128

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--- 158
            DY G   DQ++ I+ +LR +PY RR I+SAWN      MALPPCH   QFYV   K   
Sbjct: 129 TDYTGKGYDQLAKIIDTLRTNPYDRRIILSAWNPPAFKDMALPPCHVFCQFYVSFPKNSK 188

Query: 159 --LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
             LSC +YQRS D+ LG+PFNIASY+LLT M++ V+  + GEFIHT+GD H+Y +H +  
Sbjct: 189 PQLSCIMYQRSCDMGLGVPFNIASYALLTHMISHVVDMEPGEFIHTMGDSHVYCDHVDAL 248

Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             QL R+PR  P + IN  +  +  FR+EDF ++ YEP+  I  ++SV
Sbjct: 249 KEQLKRTPRAFPTLKINRKVTSIDDFRFEDFEVKDYEPYGPIKMQMSV 296


>gi|85373857|ref|YP_457919.1| thymidylate synthase [Erythrobacter litoralis HTCC2594]
 gi|84786940|gb|ABC63122.1| thymidylate synthase [Erythrobacter litoralis HTCC2594]
          Length = 327

 Score =  256 bits (654), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 139/305 (45%), Positives = 182/305 (59%), Gaps = 43/305 (14%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL+R +   GS+R DRTGVGTRS FG Q+RFDL+ G  PLLTTK+V+WK+   E+LW
Sbjct: 23  QYLDLMRRIWAEGSERVDRTGVGTRSVFGAQLRFDLADGAMPLLTTKRVYWKTATREMLW 82

Query: 62  FLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGPI 93
           FL GD+N+  L   GV IW+EW                            A++ G+LGP+
Sbjct: 83  FLTGDTNIRPLVLQGVKIWNEWPHARYVNETGEDIALDDFIQRIADDEAFAERWGDLGPV 142

Query: 94  YGVQWRSWPDY----DG-----NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144
           YG QW  WP Y    DG       I+QI+ +V+SL+ +P SRRHI+  WNVA +D+MALP
Sbjct: 143 YGKQWVDWPTYRYRKDGLYEKSEGINQIAEVVESLKTNPGSRRHIIEGWNVAELDRMALP 202

Query: 145 PCHCLFQFYV---DNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
           PCH  +QF+V   D G+  L+C LYQRS DV LG+PFN+ S +LL  M+A     + GE 
Sbjct: 203 PCHKTYQFHVAKDDQGRDRLNCLLYQRSCDVALGLPFNLWSAALLQRMMAQQTDLEPGEL 262

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           +   GD HLY NH      QL+R P+  P + I      +  +R EDF + +YEPH  I 
Sbjct: 263 VWMGGDTHLYLNHEHLITEQLNREPQGHPTLEIVRRPDSIFDYRIEDFVVHNYEPHPPIK 322

Query: 260 AKVSV 264
           A V+V
Sbjct: 323 APVAV 327


>gi|166164565|gb|ABY83781.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  256 bits (653), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 124/274 (45%), Positives = 175/274 (63%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+    ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVGGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621


>gi|289466111|gb|ADC94826.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           reichenowi]
          Length = 598

 Score =  256 bits (653), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 123/277 (44%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 316 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 375

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 376 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 435

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV   D+MAL PCH L QFYV +GKLSC
Sbjct: 436 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDFDQMALLPCHILCQFYVFDGKLSC 495

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 496 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 555

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP+I ++  F   DFT+++Y  H  I
Sbjct: 556 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKI 592


>gi|197107405|pdb|3DL6|A Chain A, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF
           Ts-Dhfr From Cryptosporidium Hominis
 gi|197107406|pdb|3DL6|B Chain B, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF
           Ts-Dhfr From Cryptosporidium Hominis
 gi|197107407|pdb|3DL6|C Chain C, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF
           Ts-Dhfr From Cryptosporidium Hominis
 gi|197107408|pdb|3DL6|D Chain D, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF
           Ts-Dhfr From Cryptosporidium Hominis
 gi|197107409|pdb|3DL6|E Chain E, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF
           Ts-Dhfr From Cryptosporidium Hominis
          Length = 521

 Score =  256 bits (653), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 128/283 (45%), Positives = 180/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  + +  EL+WF
Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVFIRGIFEELIWF 298

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++GD+N ++L    V IW      E+ ++ G       +LGPIYG QWR +         
Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I   ++V
Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521


>gi|3097056|emb|CAA05895.1| dihydrofolate reductase-thymidylate synthetase precursor [Daucus
           carota]
          Length = 577

 Score =  256 bits (653), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 130/282 (46%), Positives = 173/282 (61%), Gaps = 21/282 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+ ++I  G  + DRT  GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 296 YLGLVENIISNGVTKNDRTRTGTVSIFGCQMRFNLRKSFPLLTTKKVFWRGVVEELLWFI 355

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103
            G +N   L   GV+IW+     E+ D       ++G+LGPIYG QWR +         D
Sbjct: 356 SGSTNAKILKEKGVNIWEGNGSREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTDMHAD 415

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 416 YSGQGFDQLLDVISKIKNNPDDRRIIQSAWNPSDLRLMALPPCHMFAQFYVANGELSCQM 475

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSR 222
           YQRS D+ LG+PFNIA+Y+LLT M+A V     G+F+H++GD H+Y+NH     +     
Sbjct: 476 YQRSADMGLGVPFNIAAYALLTCMIAHVCDLVPGDFVHSIGDAHVYSNHLSDLFETSFRM 535

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P+T P + IN    D+ SF   DF L  Y+PH  I  K++V
Sbjct: 536 LPKTFPVLKINSGEKDIDSFEAADFKLIGYDPHQKIEMKMAV 577


>gi|152149198|pdb|2OIP|A Chain A, Crystal Structure Of The S290g Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|152149199|pdb|2OIP|B Chain B, Crystal Structure Of The S290g Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|152149200|pdb|2OIP|C Chain C, Crystal Structure Of The S290g Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|152149201|pdb|2OIP|D Chain D, Crystal Structure Of The S290g Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|152149202|pdb|2OIP|E Chain E, Crystal Structure Of The S290g Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
          Length = 519

 Score =  256 bits (653), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 128/283 (45%), Positives = 180/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  + +  EL+WF
Sbjct: 237 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRGIFEELIWF 296

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++GD+N ++L    V IW      E+ ++ G       +LGPIYG QWR +         
Sbjct: 297 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 356

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 357 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 416

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 417 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 476

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I   ++V
Sbjct: 477 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 519


>gi|1169424|sp|P45350|DRTS_DAUCA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|288615|emb|CAA78954.1| dihydrofolate reductase-thymidylate synthetase [Daucus carota]
          Length = 528

 Score =  256 bits (653), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 130/282 (46%), Positives = 173/282 (61%), Gaps = 21/282 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+ ++I  G  + DRT  GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 247 YLGLVENIISNGVTKNDRTRTGTVSIFGCQMRFNLRKSFPLLTTKKVFWRGVVEELLWFI 306

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------PD 103
            G +N   L   GV+IW+     E+ D       ++G+LGPIYG QWR +         D
Sbjct: 307 SGSTNAKILKEKGVNIWEGNGSREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTDMHAD 366

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 367 YSGQGFDQLLDVISKIKNNPDDRRIIQSAWNPSDLRLMALPPCHMFAQFYVANGELSCQM 426

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSR 222
           YQRS D+ LG+PFNIA+Y+LLT M+A V     G+F+H++GD H+Y+NH     +     
Sbjct: 427 YQRSADMGLGVPFNIAAYALLTCMIAHVCDLVPGDFVHSIGDAHVYSNHLSDLFETSFRM 486

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P+T P + IN    D+ SF   DF L  Y+PH  I  K++V
Sbjct: 487 LPKTFPVLKINSGEKDIDSFEAADFKLIGYDPHQKIEMKMAV 528


>gi|166164571|gb|ABY83784.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  255 bits (652), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 123/274 (44%), Positives = 175/274 (63%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+  WNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCTWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621


>gi|145567022|gb|ABP81861.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
          Length = 621

 Score =  255 bits (652), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 123/277 (44%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+Y+NH +   +QL+
Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYSNHIDSLKVQLN 578

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I ++  F   DFT+++Y  H  I
Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKI 615


>gi|316933227|ref|YP_004108209.1| thymidylate synthase [Rhodopseudomonas palustris DX-1]
 gi|315600941|gb|ADU43476.1| thymidylate synthase [Rhodopseudomonas palustris DX-1]
          Length = 300

 Score =  255 bits (652), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 134/295 (45%), Positives = 176/295 (59%), Gaps = 34/295 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDLL  V+  G +R DRTGVGTR+ FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 8   HQYLDLLAQVLARGDERIDRTGVGTRALFGAMVRFDLSDGTVPILTTKRVYWKTAVKEML 67

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L +  V IW +W                            A + G+LGP
Sbjct: 68  WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDPISQDEFEKRIVADDAFAARWGDLGP 127

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +VQ+LR +P SRR +  AWN   +  MALPPCH ++Q+
Sbjct: 128 VYGKQWRRWLGADGREHDQIADLVQTLRNNPASRRMLFHAWNPPELGAMALPPCHMVYQY 187

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V   G+L C LYQRS D+ LG PFN    + L +MLA       GE I   GDVHLY N
Sbjct: 188 HVTQGGRLDCLLYQRSCDLLLGAPFNFVGATALQLMLAQQANLTPGELIWVGGDVHLYLN 247

Query: 212 HFEQADLQLSRSPRTLPQMII--NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q++R+PR LP M +   P+ +D   ++  DF +  Y+PHAAI A V+V
Sbjct: 248 HLDQAREQIARAPRPLPAMRLMRRPDSID--GYKITDFEVEGYDPHAAIKADVAV 300


>gi|61207219|gb|AAX40340.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  255 bits (652), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 129/273 (47%), Positives = 170/273 (62%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A V G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKVTGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|166164561|gb|ABY83779.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 620

 Score =  255 bits (651), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 124/274 (45%), Positives = 175/274 (63%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+ G++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 406 FIGGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 619


>gi|149247396|ref|XP_001528110.1| thymidylate synthase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146448064|gb|EDK42452.1| thymidylate synthase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 312

 Score =  255 bits (651), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 137/301 (45%), Positives = 181/301 (60%), Gaps = 40/301 (13%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           YLDL   +I  G  R DRTG GT+S F   Q+RFDLS   FPLLTTK+V  K ++HELLW
Sbjct: 12  YLDLCERIINEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKRVFSKGIIHELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ G ++   L   GV IW+     E+ DK       +G+LGP+YG QWR +        
Sbjct: 72  FIAGSTDAKILSDKGVKIWEGNGLREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKDCD 131

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------ 155
            DY G   DQ+  +++ L+ +PY RR I+SAWN     KMALPPCH   QFYV+      
Sbjct: 132 ADYTGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPSNKN 191

Query: 156 --------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVH 207
                     KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+    GEFIHTLGD H
Sbjct: 192 DEQNSEKSRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLGDAH 251

Query: 208 LYNNHFEQADLQLSRSPRTLPQMIINPN----IVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           +Y +H E    Q +R+P+  P+++I  +    I ++  F++EDF +  YEP+ AI  K+S
Sbjct: 252 VYLDHVEALQEQFTRTPKQFPKLVIKEDRREEIKNIDDFKFEDFEIVGYEPYPAIKMKMS 311

Query: 264 V 264
           V
Sbjct: 312 V 312


>gi|114768942|ref|ZP_01446568.1| thymidylate synthase [alpha proteobacterium HTCC2255]
 gi|114549859|gb|EAU52740.1| thymidylate synthase [alpha proteobacterium HTCC2255]
          Length = 292

 Score =  254 bits (650), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 134/292 (45%), Positives = 182/292 (62%), Gaps = 28/292 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L +++  G +  DRTGVGT S FGYQ+RF+L +GFP +TTKK+ W+S+V ELL
Sbjct: 1   MKQYLDALNYIMDNGEEVSDRTGVGTLSVFGYQIRFNLQEGFPAVTTKKLAWRSIVGELL 60

Query: 61  WFLRGDSNVSYLHR-----------HGVSIWDEWADKDG------------ELGPIYGVQ 97
           WFL G ++   L             H  +IW   AD  G            ELGP+YG Q
Sbjct: 61  WFLEGSTDERRLAELTFNKDRTDLVHKKTIWTANADAQGAELGYENNDLIKELGPVYGHQ 120

Query: 98  WRSWPDYDGNV---IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154
           WR +   D ++    DQI  ++  ++ +P SRR I+SAWN   I++MALPPCH + QF V
Sbjct: 121 WRHFDGTDKDISLSTDQIIWLINEIKNNPDSRRMILSAWNPNQINEMALPPCHTMAQFRV 180

Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
            NGKLSCQLYQRS D+FLG+PFNIASYSLLT MLA +   + G F+   GD H+Y NH +
Sbjct: 181 MNGKLSCQLYQRSADMFLGVPFNIASYSLLTHMLAQLCDLKVGSFVWVGGDCHIYKNHKK 240

Query: 215 QADLQLSRSPRTLP--QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Q   QL R+P++LP  +M    N+ +LL  R   + L++Y+P  +I A +++
Sbjct: 241 QVLEQLKRTPKSLPNLEMPSFSNLDELLQTRPIGYVLKNYDPMDSIKAPMAI 292


>gi|221053708|ref|XP_002258228.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Plasmodium knowlesi strain H]
 gi|193808061|emb|CAQ38765.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Plasmodium knowlesi strain H]
          Length = 626

 Score =  254 bits (650), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 121/283 (42%), Positives = 180/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L +  V IW+    ++             +LGPIYG QWR         +
Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKIAMEMAA 626


>gi|61207195|gb|AAX40328.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  254 bits (650), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 128/273 (46%), Positives = 170/273 (62%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG+++   L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 289 WFLRGETHAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|222086396|ref|YP_002544930.1| thymidylate synthase protein [Agrobacterium radiobacter K84]
 gi|254790227|sp|B9JH03|TYSY_AGRRK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|221723844|gb|ACM27000.1| thymidylate synthase protein [Agrobacterium radiobacter K84]
          Length = 307

 Score =  254 bits (649), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 135/303 (44%), Positives = 179/303 (59%), Gaps = 42/303 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLDL+ H+++ G  R DRTGVGT S  G  MRFDLSKG  P+ TTK+V+WK  V E+L
Sbjct: 7   YQYLDLMAHLLENGDRRIDRTGVGTLSGLGAMMRFDLSKGQLPVFTTKRVYWKLAVKEML 66

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL GD+N+  L +  V IW +W                            A+  G+LGP
Sbjct: 67  WFLTGDTNIRNLLKQNVRIWTDWPLAAYRKATGEAISQEDFEARILADEAFAETWGDLGP 126

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W D DG V DQI++++  LR +P SRR I  AWNV  +  MALPPCH ++QF
Sbjct: 127 VYGKQWRQWRDADGQVHDQIATVIDQLRHNPSSRRMIFHAWNVGELAGMALPPCHMVYQF 186

Query: 153 YVDN---------GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           +V N          +LS  +YQRS D+FLG PFNI   ++L  M+A  +    GE +   
Sbjct: 187 HVSNLPSPGETKRPRLSLMVYQRSCDLFLGNPFNICQQAVLLAMVAQQVDMDVGELVWAG 246

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLP--QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
           GDVH+Y NH +    QLSR PR  P  +++  P+ +D   +R EDF +  YEPHAAI A+
Sbjct: 247 GDVHIYLNHLDAIREQLSREPRPFPTLRLLRRPDSID--DYRIEDFEVSDYEPHAAIAAE 304

Query: 262 VSV 264
           V+V
Sbjct: 305 VAV 307


>gi|294441235|gb|ADE75019.1| dihydrofolate reductase-thymidylate synthase [Plasmodium knowlesi]
          Length = 626

 Score =  254 bits (649), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 121/277 (43%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L +  V IW+    ++             +LGPIYG QWR         +
Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP + ++  F   DFT+ +Y  H  I
Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKI 620


>gi|61207215|gb|AAX40338.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  254 bits (649), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDSGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|6226856|sp|O02604|DRTS_PLAVI RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|2266747|emb|CAA66805.1| dihydrofolate reductase-thymidylate synthetase [Plasmodium vivax]
          Length = 623

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 341 YQYLGIIYDIIMNGNKQGDRTGVGVMSNFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 400

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 401 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 460

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 461 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 520

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 521 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 580

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 581 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 623


>gi|14599956|gb|AAK71177.1|AF358959_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
          Length = 491

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 130/273 (47%), Positives = 170/273 (62%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490


>gi|14599934|gb|AAK71166.1|AF358948_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599936|gb|AAK71167.1|AF358949_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599938|gb|AAK71168.1|AF358950_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599940|gb|AAK71169.1|AF358951_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599942|gb|AAK71170.1|AF358952_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599944|gb|AAK71171.1|AF358953_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599946|gb|AAK71172.1|AF358954_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599948|gb|AAK71173.1|AF358955_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599952|gb|AAK71175.1|AF358957_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599960|gb|AAK71179.1|AF358961_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599964|gb|AAK71181.1|AF358963_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599968|gb|AAK71183.1|AF358965_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
          Length = 491

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490


>gi|61207207|gb|AAX40334.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207209|gb|AAX40335.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207211|gb|AAX40336.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207213|gb|AAX40337.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207221|gb|AAX40341.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 130/273 (47%), Positives = 170/273 (62%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|14599890|gb|AAK71144.1|AF358926_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599892|gb|AAK71145.1|AF358927_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599894|gb|AAK71146.1|AF358928_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599896|gb|AAK71147.1|AF358929_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599898|gb|AAK71148.1|AF358930_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599900|gb|AAK71149.1|AF358931_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599904|gb|AAK71151.1|AF358933_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599906|gb|AAK71152.1|AF358934_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599908|gb|AAK71153.1|AF358935_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599912|gb|AAK71155.1|AF358937_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599914|gb|AAK71156.1|AF358938_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599916|gb|AAK71157.1|AF358939_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599918|gb|AAK71158.1|AF358940_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599922|gb|AAK71160.1|AF358942_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
          Length = 491

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 130/273 (47%), Positives = 170/273 (62%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490


>gi|294441233|gb|ADE75018.1| dihydrofolate reductase-thymidylate synthase [Plasmodium knowlesi]
          Length = 626

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 121/277 (43%), Positives = 177/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L +  V IW+    ++             +LGPIYG QWR         +
Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP + ++  F   DFT+ +Y  H  I
Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKI 620


>gi|61207201|gb|AAX40331.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207203|gb|AAX40332.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207205|gb|AAX40333.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|61207189|gb|AAX40325.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|61207183|gb|AAX40322.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207185|gb|AAX40323.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207191|gb|AAX40326.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207197|gb|AAX40329.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|115299506|gb|ABI93723.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
          Length = 369

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 130/266 (48%), Positives = 169/266 (63%), Gaps = 21/266 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLD++R ++K G  + DRTGVGT S FG  MRF+L++ FPLLTTKKV ++ VV ELL 
Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGVVEELLR 163

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW-------- 101
           FLRGD+N   L   GV IW+     E+ D  G       +LGP+YG QWR +        
Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY+   +DQ+  ++Q L+ +P SRR I+SAWN + + +MALPPCH + QF+V NGKLSC
Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQMALPPCHVMSQFFVANGKLSC 283

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D  LGIPFNIASY+LLT MLA       GEF+H LGD H+Y+NH +    Q+ 
Sbjct: 284 MMYQRSCDFGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDF 247
           R P   P + I      L  + YEDF
Sbjct: 344 RVPYPFPILKIKSK-KSLFDYTYEDF 368


>gi|14599920|gb|AAK71159.1|AF358941_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599924|gb|AAK71161.1|AF358943_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599926|gb|AAK71162.1|AF358944_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599928|gb|AAK71163.1|AF358945_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599930|gb|AAK71164.1|AF358946_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599932|gb|AAK71165.1|AF358947_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599950|gb|AAK71174.1|AF358956_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599954|gb|AAK71176.1|AF358958_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599958|gb|AAK71178.1|AF358960_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599962|gb|AAK71180.1|AF358962_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599966|gb|AAK71182.1|AF358964_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
          Length = 491

 Score =  253 bits (647), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490


>gi|99030329|gb|ABF61430.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
 gi|99082911|gb|ABF66629.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  253 bits (647), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618


>gi|99082907|gb|ABF66627.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMELAA 618


>gi|186702037|gb|ACC91330.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 624

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 624


>gi|186702039|gb|ACC91331.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 624

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 624


>gi|99082913|gb|ABF66630.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNKKLFHREVNDLGPIYGFQWRHFGAGYTNMH 455

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618


>gi|186702047|gb|ACC91335.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 624

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 624


>gi|186702041|gb|ACC91332.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
 gi|186702043|gb|ACC91333.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
 gi|186702045|gb|ACC91334.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
 gi|186702051|gb|ACC91337.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 624

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 624


>gi|99082915|gb|ABF66631.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618


>gi|156098099|ref|XP_001615082.1| bifunctional dihydrofolate reductase-thymidylate synthase 1
           [Plasmodium vivax SaI-1]
 gi|148803956|gb|EDL45355.1| bifunctional dihydrofolate reductase-thymidylate synthase 1,
           putative [Plasmodium vivax]
          Length = 624

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKIAMEMAA 624


>gi|14599974|gb|AAK71186.1|AF358968_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma
           vespertilionis]
          Length = 491

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 130/273 (47%), Positives = 169/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E    QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCKEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490


>gi|166164551|gb|ABY83774.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 641

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 175/277 (63%), Gaps = 20/277 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 359 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 418

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 419 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 478

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++  P SRR I+ AW V  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 479 DNYENKGIDQLKNIINLIKNVPTSRRIILCAWYVKDLDKMALPPCHILCQFYIFDGKLSC 538

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 539 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 598

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           R P   P + +NP I ++  F   DFT+ +Y  H  I
Sbjct: 599 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKI 635


>gi|284156874|gb|ADB79640.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156878|gb|ADB79642.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156880|gb|ADB79643.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156902|gb|ADB79654.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156906|gb|ADB79656.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156910|gb|ADB79658.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156922|gb|ADB79664.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 476

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 461 KRVPRAFPYLV 471


>gi|186702049|gb|ACC91336.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 630

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 408 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 467

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 468 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 588 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 630


>gi|284156876|gb|ADB79641.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156896|gb|ADB79651.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156898|gb|ADB79652.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 477

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 124/251 (49%), Positives = 164/251 (65%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 461 KRVPRAFPYLV 471


>gi|284156914|gb|ADB79660.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 477

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 124/251 (49%), Positives = 164/251 (65%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 461 KRVPRAFPYLV 471


>gi|284156904|gb|ADB79655.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 477

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 124/251 (49%), Positives = 164/251 (65%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 461 KRVPRAFPYLV 471


>gi|284156866|gb|ADB79636.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 478

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 461 KRVPRAFPYLV 471


>gi|284156926|gb|ADB79666.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 477

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 222 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 281

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 282 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 341

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 342 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 401

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 402 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 461

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 462 KRVPRAFPYLV 472


>gi|284156868|gb|ADB79637.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156870|gb|ADB79638.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156872|gb|ADB79639.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156882|gb|ADB79644.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156884|gb|ADB79645.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156886|gb|ADB79646.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156888|gb|ADB79647.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156890|gb|ADB79648.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156892|gb|ADB79649.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156900|gb|ADB79653.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156908|gb|ADB79657.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156918|gb|ADB79662.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156920|gb|ADB79663.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156928|gb|ADB79667.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 476

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 461 KRVPRAFPYLV 471


>gi|284156912|gb|ADB79659.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 364

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 124/251 (49%), Positives = 164/251 (65%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 107 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 166

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 167 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 226

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 227 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 286

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 287 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 346

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 347 KRVPRAFPYLV 357


>gi|99082909|gb|ABF66628.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  253 bits (645), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREANDLGPIYGFQWRHFGAEYTNMH 455

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLVKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHADSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618


>gi|284156924|gb|ADB79665.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 471

 Score =  253 bits (645), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 461 KRVPRAFPYLV 471


>gi|284156894|gb|ADB79650.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 477

 Score =  253 bits (645), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 124/251 (49%), Positives = 164/251 (65%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 461 KRVPRAFPYLV 471


>gi|116490829|ref|YP_810373.1| thymidylate synthase [Oenococcus oeni PSU-1]
 gi|290890274|ref|ZP_06553353.1| hypothetical protein AWRIB429_0743 [Oenococcus oeni AWRIB429]
 gi|122276989|sp|Q04FR4|TYSY_OENOB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116091554|gb|ABJ56708.1| thymidylate synthase [Oenococcus oeni PSU-1]
 gi|290480060|gb|EFD88705.1| hypothetical protein AWRIB429_0743 [Oenococcus oeni AWRIB429]
          Length = 319

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 176/314 (56%), Gaps = 51/314 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R +++ G+ + DRT  GT S FG QMRFDLS+GFPLLT+KKV +  +  ELLW
Sbjct: 6   EQYLNLARRILETGASKMDRTKTGTHSIFGAQMRFDLSEGFPLLTSKKVAFGRIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L +H   IWDEW                                      
Sbjct: 66  FLRGDNNIRFLLQHHNHIWDEWPFKKWVESNEYKGPDMTDFGLRTQKDPIFAEQYKEQKK 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDY-DGNVIDQISSIVQSLRADPYSRRHIV 130
                       + K G +G +YG  WR WPD  D   +DQI+ ++  ++ +P SRR I+
Sbjct: 126 IFVDRILNDDEFSKKFGTIGDVYGKLWRHWPDANDDGSVDQITRLINEIKVNPNSRRLIL 185

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           +AW+        LP CH + QFYV +GK+S Q+YQRS D FLG+PFNIASYSLL  M+A+
Sbjct: 186 TAWDPETTPFATLPSCHVMSQFYVVDGKISLQMYQRSADYFLGVPFNIASYSLLLSMVAA 245

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G + GEFIHT+GD H+YNNH +Q   QLS+    LP + +NP++  +  +   D  L 
Sbjct: 246 QTGLEVGEFIHTIGDAHIYNNHVDQIKEQLSKPTHKLPTLKLNPDVKSIFDYEMSDIKLE 305

Query: 251 SYEPHAAILAKVSV 264
           +Y     I A ++V
Sbjct: 306 NYIHEDVIKAPIAV 319


>gi|296473671|gb|DAA15786.1| thymidylate synthase [Bos taurus]
          Length = 354

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 175/320 (54%), Gaps = 58/320 (18%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  R DRTG GT S FG Q R++L   FPLLTTK+V WK V+ ELLWF
Sbjct: 35  QYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRDEFPLLTTKRVFWKGVLEELLWF 94

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 95  IKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWRHFGAEYKDMDS 154

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 155 EYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 214

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ--- 219
           LYQRSGD+ LG+PFNIASY+LLT M+A +   + G+F+HTLGD H+Y NH E    Q   
Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQALM 274

Query: 220 -----------------------------------LSRSPRTLPQMIINPNIVDLLSFRY 244
                                              L R PR  P++ I   +  +  F+ 
Sbjct: 275 ELRGQSSRSLDGDGQAGTSRWAPVATDTERDRCCELQREPRPFPKLKILRKVETIDDFQA 334

Query: 245 EDFTLRSYEPHAAILAKVSV 264
           EDF +  Y PH  I  +++V
Sbjct: 335 EDFQIEGYNPHPTIKMEMAV 354


>gi|118587059|ref|ZP_01544489.1| thymidylate synthase [Oenococcus oeni ATCC BAA-1163]
 gi|118432469|gb|EAV39205.1| thymidylate synthase [Oenococcus oeni ATCC BAA-1163]
          Length = 331

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 176/314 (56%), Gaps = 51/314 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R +++ G+ + DRT  GT S FG QMRFDLS+GFPLLT+KKV +  +  ELLW
Sbjct: 18  EQYLNLARRILETGASKMDRTKTGTHSIFGAQMRFDLSEGFPLLTSKKVAFGRIKSELLW 77

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L +H   IWDEW                                      
Sbjct: 78  FLRGDNNIRFLLQHHNHIWDEWPFKKWVESNEYKGPDMTDFGLRTQKDPIFAEQYKEQKK 137

Query: 84  ------------ADKDGELGPIYGVQWRSWPDY-DGNVIDQISSIVQSLRADPYSRRHIV 130
                       + K G +G +YG  WR WPD  D   +DQI+ ++  ++ +P SRR I+
Sbjct: 138 IFVDRILNDDEFSKKFGTIGDVYGKLWRHWPDANDDGSVDQITRLINEIKVNPNSRRLIL 197

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           +AW+        LP CH + QFYV +GK+S Q+YQRS D FLG+PFNIASYSLL  M+A+
Sbjct: 198 TAWDPETTPFATLPSCHVMSQFYVVDGKISLQMYQRSADYFLGVPFNIASYSLLLSMVAA 257

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G + GEFIHT+GD H+YNNH +Q   QLS+    LP + +NP++  +  +   D  L 
Sbjct: 258 QTGLEVGEFIHTIGDAHIYNNHVDQIKEQLSKPTHKLPTLKLNPDVKSIFDYEMSDIKLE 317

Query: 251 SYEPHAAILAKVSV 264
           +Y     I A ++V
Sbjct: 318 NYIHEDVIKAPIAV 331


>gi|14599902|gb|AAK71150.1|AF358932_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599910|gb|AAK71154.1|AF358936_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
          Length = 491

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/273 (46%), Positives = 168/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+ LT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYAFLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 468 KRVPRAFPYLV----------FRREREFLEDYE 490


>gi|157864294|ref|XP_001680857.1| dihydrofolate reductase-thymidylate synthase [Leishmania major]
 gi|118936|sp|P07382|DRTS_LEIMA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|9546|emb|CAA36019.1| unnamed protein product [Leishmania major]
 gi|159310|gb|AAA29232.1| dihydrofolate reductase-thymidylate synthase (EC 1.5.1.3 and EC
           2.1.1.45) [Leishmania major]
 gi|68124149|emb|CAJ02132.1| dihydrofolate reductase-thymidylate synthase [Leishmania major
           strain Friedlin]
          Length = 520

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 130/286 (45%), Positives = 173/286 (60%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WFLRG+++   L    + IWD     E+ D       K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETSAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI  IV++++ +P  RR +V+AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIKLIVETIKTNPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH +    
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P +I       L  +   D  +  Y PH AI  +++V
Sbjct: 475 QLERVPHAFPTLIFKEERQYLEDYELTDMEVIDYVPHPAIKMEMAV 520


>gi|22003396|gb|AAM88659.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
          Length = 520

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 130/286 (45%), Positives = 173/286 (60%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D       K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAXLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI  IV++++A+P  RR +V+AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIRFIVETIKANPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH +    
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P +I       L  +   D  +  Y PH  I  ++++
Sbjct: 475 QLERVPHAFPTLIFKAERQFLEDYELTDMEVIDYVPHPPIKMEMAL 520


>gi|166164567|gb|ABY83782.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  252 bits (644), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 123/274 (44%), Positives = 175/274 (63%), Gaps = 20/274 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR         +
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ A NV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCARNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           R P   P + +NP I ++  F   DFT+ +Y  H
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHH 621


>gi|284156916|gb|ADB79661.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 462

 Score =  252 bits (644), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 207 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 266

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 267 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 326

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 327 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 386

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 387 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 446

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 447 KRVPRAFPYLV 457


>gi|22003398|gb|AAM88660.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
          Length = 520

 Score =  252 bits (643), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 130/286 (45%), Positives = 173/286 (60%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D       K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETNARLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI  IV++++A+P  RR +V+AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIRFIVETIKANPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH +    
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P +I       L  +   D  +  Y PH  I  ++++
Sbjct: 475 QLERVPHAFPTLIFKAERQFLEDYELTDMEVIDYVPHPPIKMEMAL 520


>gi|254572255|ref|XP_002493237.1| Thymidylate synthase, required for de novo biosynthesis of
           pyrimidine deoxyribonucleotides [Pichia pastoris GS115]
 gi|238033035|emb|CAY71058.1| Thymidylate synthase, required for de novo biosynthesis of
           pyrimidine deoxyribonucleotides [Pichia pastoris GS115]
          Length = 298

 Score =  252 bits (643), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 135/288 (46%), Positives = 178/288 (61%), Gaps = 27/288 (9%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           YLDL   +IK G  R DRTG GT S F   Q+RF+L  G FPLLTTKK   K ++HELLW
Sbjct: 11  YLDLCVRIIKEGEHRPDRTGTGTYSLFAPPQLRFNLRDGQFPLLTTKKTFVKGIIHELLW 70

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD----KD---GELGPIYGVQWRSW-------- 101
           F+ G ++   L   GV IW+     E+ D    KD   G+LGP+YG QWR +        
Sbjct: 71  FVEGCTDGKKLSEKGVRIWEGNGSREYLDSLGLKDREVGDLGPVYGFQWRHFGAQYKDCK 130

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--- 158
            DY G   DQ+S ++++LR +PY RR I+SAWN    +KMALPPCH    FYV   K   
Sbjct: 131 TDYTGQGFDQLSRVIETLRTNPYDRRIIMSAWNPPDFEKMALPPCHVFCHFYVSFPKDKK 190

Query: 159 --LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
             LSC +YQRS D+ LG+PFN+ASY+LLT M+A V+    G+FIHT+GD H+Y +H +  
Sbjct: 191 PELSCLMYQRSCDMGLGVPFNVASYALLTKMIAHVVDMDCGDFIHTMGDAHVYLDHVDAL 250

Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +Q  R P+  P + IN N  D+  F++EDF + +Y+PH  I  K+SV
Sbjct: 251 KVQAERIPKKFPTLRINTNTKDIDGFKFEDFQIDNYDPHPPIKMKMSV 298


>gi|14599970|gb|AAK71184.1|AF358966_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi
           marinkellei]
 gi|14599972|gb|AAK71185.1|AF358967_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi
           marinkellei]
          Length = 491

 Score =  252 bits (643), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 124/251 (49%), Positives = 163/251 (64%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+     + D  G       +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGADYTHH 347

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKTIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E    QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCKEQL 467

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 468 KRVPRAFPYLV 478


>gi|99030335|gb|ABF61433.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  252 bits (643), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 121/283 (42%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTG G  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGAGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKSVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLENVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618


>gi|61207187|gb|AAX40324.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  252 bits (643), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 127/273 (46%), Positives = 168/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  + + G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRITREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|328352748|emb|CCA39146.1| thymidylate synthase [Pichia pastoris CBS 7435]
          Length = 296

 Score =  252 bits (643), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 135/288 (46%), Positives = 178/288 (61%), Gaps = 27/288 (9%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           YLDL   +IK G  R DRTG GT S F   Q+RF+L  G FPLLTTKK   K ++HELLW
Sbjct: 9   YLDLCVRIIKEGEHRPDRTGTGTYSLFAPPQLRFNLRDGQFPLLTTKKTFVKGIIHELLW 68

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD----KD---GELGPIYGVQWRSW-------- 101
           F+ G ++   L   GV IW+     E+ D    KD   G+LGP+YG QWR +        
Sbjct: 69  FVEGCTDGKKLSEKGVRIWEGNGSREYLDSLGLKDREVGDLGPVYGFQWRHFGAQYKDCK 128

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--- 158
            DY G   DQ+S ++++LR +PY RR I+SAWN    +KMALPPCH    FYV   K   
Sbjct: 129 TDYTGQGFDQLSRVIETLRTNPYDRRIIMSAWNPPDFEKMALPPCHVFCHFYVSFPKDKK 188

Query: 159 --LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
             LSC +YQRS D+ LG+PFN+ASY+LLT M+A V+    G+FIHT+GD H+Y +H +  
Sbjct: 189 PELSCLMYQRSCDMGLGVPFNVASYALLTKMIAHVVDMDCGDFIHTMGDAHVYLDHVDAL 248

Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +Q  R P+  P + IN N  D+  F++EDF + +Y+PH  I  K+SV
Sbjct: 249 KVQAERIPKKFPTLRINTNTKDIDGFKFEDFQIDNYDPHPPIKMKMSV 296


>gi|254577775|ref|XP_002494874.1| ZYRO0A11704p [Zygosaccharomyces rouxii]
 gi|238937763|emb|CAR25941.1| ZYRO0A11704p [Zygosaccharomyces rouxii]
          Length = 310

 Score =  251 bits (642), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 136/290 (46%), Positives = 177/290 (61%), Gaps = 27/290 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL++ ++  G  R DRTG GT S F   Q+RFDLS   FPLLTTKKV  K ++ EL
Sbjct: 21  QQYLDLIQRILDEGEFRPDRTGTGTYSIFAPPQLRFDLSNDRFPLLTTKKVFTKGIILEL 80

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------ 101
           LWF+ G ++   L   GV IW+     E+ DK       +G+LGP+YG QWR +      
Sbjct: 81  LWFISGCTDGKKLSEQGVKIWEGNGSREYLDKIGLHDRREGDLGPVYGFQWRHFGAKYRT 140

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ+  ++  L+ +PY RR I+SAWN      MALPPCH   QFYV     
Sbjct: 141 CDDDYTGQGFDQLHEVIHKLKNNPYDRRIIMSAWNPPDFPLMALPPCHVFSQFYVSFPKE 200

Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
              KLSC LYQRS D+ LG+PFNIASYSLLT M+A V   + GEFIHT+GD H+Y +H +
Sbjct: 201 GKPKLSCLLYQRSCDMGLGVPFNIASYSLLTKMIAHVCDMEPGEFIHTMGDAHIYKDHID 260

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               QLSR+P+  PQ+ I   + ++ +F+YEDF + +Y PH  I   +SV
Sbjct: 261 ALKEQLSRTPKDFPQLKIARKMDNIDNFKYEDFKIENYHPHGRIQMNMSV 310


>gi|50548459|ref|XP_501699.1| YALI0C10901p [Yarrowia lipolytica]
 gi|49647566|emb|CAG82008.1| YALI0C10901p [Yarrowia lipolytica]
          Length = 296

 Score =  251 bits (642), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 27/288 (9%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           YLDL   VI+ G  R DRTG GT S F   Q+RFDLS    PLLTTK+V ++ V+ ELLW
Sbjct: 9   YLDLCARVIEEGESRDDRTGTGTLSLFAPPQLRFDLSNDILPLLTTKRVFYRGVLEELLW 68

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ G ++   L    + IWD     E+ +K       +G+LGP+YG QWR +        
Sbjct: 69  FVAGCTDGKKLSEKNIHIWDGNGSKEFLEKAGLGHRREGDLGPVYGFQWRHFGAEYKNCD 128

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-----DN 156
            DY G  +DQ+  ++ +LR +P+ RR I+SAWN A + KMALPPCH   QFYV     + 
Sbjct: 129 TDYTGQGVDQLKQVIHTLRTNPHDRRIILSAWNPADLPKMALPPCHMFCQFYVSYKNSER 188

Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           G+LSCQLYQRS D+ LG+PFNIASY+LLT M+A V     GE IHT+GD H+Y +H +  
Sbjct: 189 GRLSCQLYQRSCDLGLGVPFNIASYALLTRMIAQVTDLDCGELIHTMGDAHVYKDHVDAL 248

Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             Q++R+P   P++    +I D+  F YEDF L  Y+P + I  ++SV
Sbjct: 249 KQQIARTPGQFPKLTFARDIKDIDGFNYEDFVLEGYKPQSKIEMQMSV 296


>gi|255717360|ref|XP_002554961.1| KLTH0F17864p [Lachancea thermotolerans]
 gi|238936344|emb|CAR24524.1| KLTH0F17864p [Lachancea thermotolerans]
          Length = 328

 Score =  251 bits (642), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 135/292 (46%), Positives = 175/292 (59%), Gaps = 29/292 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTF-GYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL + +I+ G  R DRTG GT S F   Q+RFDLS   FPLLTTK+V  K ++ EL
Sbjct: 37  QQYLDLCQRIIEEGDFRPDRTGTGTYSLFVPPQLRFDLSNDRFPLLTTKRVFTKGIILEL 96

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------ 101
           LWF+ G ++   L   GV IW+     E+ DK       +G+LGP+YG QWR +      
Sbjct: 97  LWFISGCTDGKKLSEQGVKIWEGNGSREYLDKLGLTDRREGDLGPVYGFQWRHFGADYKT 156

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154
              DY     DQ+  I+  ++ +P  RR I+SAWN     KMALPPCH   QFYV     
Sbjct: 157 CEDDYTNQGFDQLEDIIHRIKTNPTDRRIIMSAWNPPDFAKMALPPCHVFSQFYVTLPKK 216

Query: 155 --DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
             +  KLSC LYQRS D+ LG+PFNIASY+LLT M+A V   + GEFIHT+GD H+Y +H
Sbjct: 217 EGERPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVCEMEPGEFIHTMGDAHVYKDH 276

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +    Q+ R PR  P++ I  N+ D+  F+YEDF +  Y PH  I  K+SV
Sbjct: 277 IDALKEQIQRFPRDFPKLKIKRNVADINDFKYEDFEISEYNPHGKIQMKMSV 328


>gi|99030331|gb|ABF61431.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  251 bits (642), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  +  + ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGKIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618


>gi|159404|gb|AAA29272.1| thymidylate synthase-dihydrofolate reductase (EC 2.1.1.45; EC
           1.5.1.3) [Leishmania tropica]
          Length = 520

 Score =  251 bits (642), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 129/286 (45%), Positives = 173/286 (60%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WFLRG+++   L    + IWD     E+ D       K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETSAQLLTDKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI  IV++++ +P  RR +V+AWN   + KMA+PPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIKLIVETIKTNPNDRRLLVTAWNPCALQKMAVPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH +    
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P +I       L  +   D  +  Y PH AI  +++V
Sbjct: 475 QLERVPHAFPTLIFKEERQYLEDYELTDMEVIDYVPHPAIKMEMAV 520


>gi|85708445|ref|ZP_01039511.1| Thymidylate synthase [Erythrobacter sp. NAP1]
 gi|85689979|gb|EAQ29982.1| Thymidylate synthase [Erythrobacter sp. NAP1]
          Length = 322

 Score =  251 bits (641), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 132/304 (43%), Positives = 177/304 (58%), Gaps = 42/304 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYL+L+R + + GS+R DRTG GTRS  G  +R+DL+ G  PLLTTK+V+WK+   E+LW
Sbjct: 19  QYLNLMREIWERGSERMDRTGTGTRSIAGAMLRYDLADGAMPLLTTKRVYWKTATREMLW 78

Query: 62  FLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGPI 93
           FL G++N+  L   GV IW+EW                            A + G+LGP+
Sbjct: 79  FLTGETNIRPLVLQGVKIWNEWPHANYVRETGDEIALEDFVKRIADDEGFAKRWGDLGPV 138

Query: 94  YGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144
           YG QW  WP Y          G  I+Q++ +V+SLR +P SRRHI+  WNVA +D+MALP
Sbjct: 139 YGKQWVDWPTYRYRKDGLYEKGEGINQVAEVVESLRNNPGSRRHIIEGWNVAELDRMALP 198

Query: 145 PCHCLFQFYVDNGK----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
           PCH  +QF+V   K    L+C LYQRS DV LG+PFN+ S +LLT M+A   G + GE I
Sbjct: 199 PCHKTYQFHVAGAKGKERLNCLLYQRSCDVALGLPFNLWSAALLTRMMAQQTGLEAGELI 258

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260
              GDVHLY NH    + QL+R P   P++ I      +  ++ EDF +  Y P   I A
Sbjct: 259 WMGGDVHLYLNHAHLIEEQLTREPTGNPRLEITRKPETIFDYKIEDFRVDDYAPLPPIKA 318

Query: 261 KVSV 264
            V+V
Sbjct: 319 PVAV 322


>gi|322496602|emb|CBZ31672.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 520

 Score =  251 bits (641), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 130/286 (45%), Positives = 171/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D  G       +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI SIV++++A+P  RR + +AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH      
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH  I  +++V
Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520


>gi|22001023|gb|AAM82248.1| dihydrofolate reductase/thymidylate synthase [Leishmania infantum]
 gi|321398942|emb|CAM65520.2| dihydrofolate reductase-thymidylate synthase [Leishmania infantum
           JPCM5]
          Length = 520

 Score =  251 bits (641), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 130/286 (45%), Positives = 171/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D  G       +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI SIV++++A+P  RR + +AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH      
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH  I  +++V
Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520


>gi|51869967|ref|YP_073520.1| thymidylate synthase [Lymphocystis disease virus - isolate China]
 gi|51858175|gb|AAU10859.1| thymidylate synthase [Lymphocystis disease virus - isolate China]
          Length = 286

 Score =  251 bits (641), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 125/281 (44%), Positives = 175/281 (62%), Gaps = 21/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+ L++++  G  + DRTG GT S FG Q R+DLS  FPL TTK++ W+ +V ELLWFL
Sbjct: 7   YLNQLKYILANGRLKIDRTGTGTLSVFGLQNRYDLST-FPLFTTKRMFWRGIVEELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW--------PD 103
           +G +N   L +  V IWD +  K            +G+LGPIYG QWR +         +
Sbjct: 66  KGSTNSLNLSKKSVHIWDAYGSKSNLNRLGFNHREEGDLGPIYGFQWRHFGANYINCHTN 125

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y+G  IDQ+  I+  L+ +P  RR +++AWN + ID+  LPPCH L QFY  +  LSCQ 
Sbjct: 126 YEGQGIDQLQIIITKLKTNPNDRRILMTAWNPSDIDQAVLPPCHVLCQFYAIDNILSCQC 185

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFN+ASY+LLT ++A  +  + GEFIHTLGD H+Y +H +    QL+RS
Sbjct: 186 YQRSADMGLGVPFNVASYALLTYLIAQAVDMKPGEFIHTLGDAHIYLDHIKAIKEQLTRS 245

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +  P +I+     +L  F++EDF L  Y PH AI   +S+
Sbjct: 246 IKPSPVVILKKKSDNLCDFKFEDFELLDYNPHPAISLDLSI 286


>gi|22121984|gb|AAM88576.1| dhfr-ts [Leishmania chagasi]
          Length = 520

 Score =  251 bits (641), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 130/286 (45%), Positives = 172/286 (60%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D       K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI SIV++++A+P  RR + +AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH      
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH  I  +++V
Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520


>gi|61207193|gb|AAX40327.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  251 bits (641), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 127/273 (46%), Positives = 168/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QW  +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWHHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|45188092|ref|NP_984315.1| ADR219Cp [Ashbya gossypii ATCC 10895]
 gi|44982909|gb|AAS52139.1| ADR219Cp [Ashbya gossypii ATCC 10895]
          Length = 340

 Score =  251 bits (640), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 135/291 (46%), Positives = 174/291 (59%), Gaps = 28/291 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
            QYLDL + +I+ G  R DRTG GT S F   Q+RFDLS   FPLLTTKKV  + ++ EL
Sbjct: 50  QQYLDLCKRIIEHGEFRPDRTGTGTYSLFAPPQLRFDLSGDKFPLLTTKKVFTRGIILEL 109

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101
           LWF+ G ++   L   GV IW+     E+ D       ++G+LGP+YG QWR +      
Sbjct: 110 LWFIAGCTDGKKLSEQGVKIWEGNGSREYLDGLGLHDRREGDLGPVYGFQWRHFGAEYGT 169

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-- 157
              DY G  +DQ+  ++  ++  PY RR I+SAWN A   KMALPPCH L QFYV  G  
Sbjct: 170 CDDDYTGKGVDQLRELIDKIKNKPYDRRIILSAWNPADFPKMALPPCHVLSQFYVSFGPE 229

Query: 158 ----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
               KLSCQLYQRS D+ LG+PFNIASY+LLT M+A V     GEFIHT+GD H+Y++H 
Sbjct: 230 GSRPKLSCQLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMDAGEFIHTMGDAHVYSDHI 289

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                Q+ R PR  P + I   + D+  F  +DF +  Y PH  I   +SV
Sbjct: 290 AALKEQIERVPREFPNLRIKRKVTDIDDFTLDDFEITDYNPHPRIQMNMSV 340


>gi|268568852|ref|XP_002640365.1| Hypothetical protein CBG20269 [Caenorhabditis briggsae]
 gi|187023537|emb|CAP37322.1| hypothetical protein CBG_20269 [Caenorhabditis briggsae AF16]
          Length = 315

 Score =  251 bits (640), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 120/283 (42%), Positives = 175/283 (61%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61
           +YL  +  +++ GS R DRTG GT S FG Q ++ L +   PLLTTK+V+WK V+ ELLW
Sbjct: 33  KYLKQVEQILQEGSRRDDRTGTGTISIFGMQSKYSLRNDTIPLLTTKRVYWKGVLEELLW 92

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW-------- 101
           F+ G ++   L    V IW++  D+            +G+LGP+YG QWR +        
Sbjct: 93  FISGSTDGKLLMAKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDCH 152

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  IDQ++ +++ ++ +P SRR I+SAWN + + +M LPPCH + QFYVDNG+LSC
Sbjct: 153 TDYTGQGIDQLAEVIRQIKEEPDSRRIILSAWNPSELGQMVLPPCHTMCQFYVDNGELSC 212

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFN+ASY LLT M+A V G + G  +HTLGD H+Y+NH +    Q+ 
Sbjct: 213 QLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKAGTLVHTLGDAHVYSNHVDALKTQME 272

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P++    ++  +  F  +   L  Y+ H  I+  ++V
Sbjct: 273 REPYAFPKIRFTRDVSSIDDFTSDMIVLEDYKCHGKIVMDMAV 315


>gi|61207217|gb|AAX40339.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  251 bits (640), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 127/273 (46%), Positives = 168/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S F  QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFDAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|61207199|gb|AAX40330.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 127/273 (46%), Positives = 168/273 (61%), Gaps = 31/273 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMR  L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRSSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WFLRG++    L   GV IWD+   +            + +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R PR  P ++          FR E   L  YE
Sbjct: 469 KRVPRAFPYLV----------FRREREFLEDYE 491


>gi|149186677|ref|ZP_01864988.1| thymidylate synthase [Erythrobacter sp. SD-21]
 gi|148829585|gb|EDL48025.1| thymidylate synthase [Erythrobacter sp. SD-21]
          Length = 313

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/306 (44%), Positives = 176/306 (57%), Gaps = 43/306 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDL+R +   G +RRDRTG+GTRS FG Q+RFDL++G  PL+TTK+V+WK+   ELL
Sbjct: 8   QQYLDLMRLIWLEGDERRDRTGIGTRSVFGAQLRFDLAEGAMPLVTTKRVYWKTATRELL 67

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------ADKD------GELGP 92
           WFL GD+N+  L   GV IW+EW                      AD        G+LGP
Sbjct: 68  WFLTGDTNIRPLVLQGVKIWNEWPHARYVEQTGDEIELEAFVQKIADDQQFAAMWGDLGP 127

Query: 93  IYGVQWRSWPDYD---------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           +YG QW  WP Y          G  I+Q++ +V+SL  +P SRRHI+  WNVA + +MAL
Sbjct: 128 VYGKQWVDWPTYQPVKGGLFRKGRGINQVAEVVESLNENPGSRRHIIEGWNVAEVPRMAL 187

Query: 144 PPCHCLFQFYVDNG-----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
           PPCH  +Q++V  G      L+  LYQRS DV LG+PFN+ S +LL  M+A  +  Q GE
Sbjct: 188 PPCHKTYQYHVSTGIDGEPLLNGILYQRSCDVALGLPFNLWSGALLLRMIAQQVDMQPGE 247

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           F+   GD HLY NH      QLSR P  LP + I      +  +R EDF +  Y PH  I
Sbjct: 248 FVWMGGDTHLYLNHEHLVKEQLSREPHGLPTLEIVRRPPTIFDYRIEDFAVHDYTPHGPI 307

Query: 259 LAKVSV 264
            A V+V
Sbjct: 308 KAPVAV 313


>gi|264685644|dbj|BAI49171.1| hypothetical protein [Bacillus phage phiNIT1]
          Length = 305

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 124/295 (42%), Positives = 178/295 (60%), Gaps = 37/295 (12%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +Y +L++ ++  G+ + DRTG GT S FG QM FDLSKGFP+LTTKK+ ++ +  EL WF
Sbjct: 7   EYFNLVKKIMDEGTFKDDRTGTGTLSLFGPQMEFDLSKGFPMLTTKKLPFRIIAEELFWF 66

Query: 63  LRGDSNVSYLHRHGVSIWDE-----WADKDG----------------ELGPIYGVQWRSW 101
           + GD+++  L    ++IW +     + D  G                +LGPIYG QWRSW
Sbjct: 67  INGDTDLKTLLDKNINIWTDDAYRFYLDNGGSLTKSGFIQRTKNAGFDLGPIYGKQWRSW 126

Query: 102 PDYDGNVI------------DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
               G V+            DQ+  +++ +  +P SRRHIVSAWNV  ++ MALPPCH L
Sbjct: 127 ----GGVVTVGDSMGYQMKHDQLFRVIKDISTNPDSRRHIVSAWNVGDLEYMALPPCHVL 182

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           FQFYV NG LSC+LY RS D+FLG PFNIASY+LLT ++A + G + G+ I+++GD H+Y
Sbjct: 183 FQFYVVNGTLSCKLYMRSNDIFLGAPFNIASYALLTHIIAKMTGLKVGKLIYSVGDAHIY 242

Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            NH +    Q+ R P+ +PQ+ +     ++  +  ED  L  Y+ H  I  K+S 
Sbjct: 243 VNHLDLLKSQMEREPKEMPQLEVKAVHENIEDYTLEDIVLTGYDAHPTIKGKLST 297


>gi|99082917|gb|ABF66632.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 121/283 (42%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S  GY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKCGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618


>gi|72073194|ref|XP_797720.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115944415|ref|XP_001195886.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 309

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 121/239 (50%), Positives = 159/239 (66%), Gaps = 20/239 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL+RH+   G  + DRTG GT+S FG Q R++L   FPLLTTK+V W+ V  ELLWF
Sbjct: 46  QYLDLIRHIQAHGHVKGDRTGTGTKSIFGAQSRYNLRDQFPLLTTKRVFWRGVAEELLWF 105

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SWP 102
           ++G +N + L    + IWD    KD            G+LGP+YG QWR         + 
Sbjct: 106 VKGCTNATELQDKKIHIWDANGSKDFLEKRGLGHYEEGDLGPVYGFQWRHFGAEYKDRFT 165

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+++++++++ +P  RR I+SAWN   + KMALPPCH   QFYV NG+LSCQ
Sbjct: 166 DYTGQGVDQLANVIETIKNNPDDRRIIMSAWNPPDLPKMALPPCHAFVQFYVCNGELSCQ 225

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           LYQRSGD+ LG+PFNIASYSLLT M+A V G + G+F+HTLGD H+Y NH E    Q+S
Sbjct: 226 LYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGDFVHTLGDAHVYLNHIEPLKEQVS 284


>gi|241951452|ref|XP_002418448.1| thymidylate synthase, putative [Candida dubliniensis CD36]
 gi|223641787|emb|CAX43749.1| thymidylate synthase, putative [Candida dubliniensis CD36]
          Length = 315

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/304 (44%), Positives = 177/304 (58%), Gaps = 43/304 (14%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           YLDL + +I  G  R DRTG GT+S F   Q+RFDLS   FPLLTTKKV  K ++HELLW
Sbjct: 12  YLDLCKKIIDEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ G ++   L   GV IW+     E+ DK       +G+LGP+YG QWR +        
Sbjct: 72  FVAGSTDAKILSEKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKDCD 131

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------ 155
            DY G   DQ+  +++ L+ +PY RR I+SAWN     KMALPPCH   QFYV+      
Sbjct: 132 SDYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPTSQP 191

Query: 156 -----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204
                        KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+    GEFIHTLG
Sbjct: 192 DSNNPKQAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLG 251

Query: 205 DVHLYNNHFEQADLQLSRSPRTLPQMII----NPNIVDLLSFRYEDFTLRSYEPHAAILA 260
           D H+Y +H +    Q  R P+  P+++I       I  +  F++EDF +  YEP+  I  
Sbjct: 252 DAHVYLDHIDALKEQFERIPKQFPKLVIKEERKAEIKSIDDFKFEDFEIIGYEPYPPIKM 311

Query: 261 KVSV 264
           K+SV
Sbjct: 312 KMSV 315


>gi|4249575|dbj|BAA74947.1| thymidylate synthase [Oryza sativa]
          Length = 322

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 131/317 (41%), Positives = 174/317 (54%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + ++  G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAQKILAEGNLKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 66  FLRGDNNIRFLLQHNNHIWDEWAFKNWVESNDYTGPDMTNFGHRAETDPEFAAVYQTQKA 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADPYSRR 127
                        +K G +G +YG  WR W           ++    +V+ ++  P SRR
Sbjct: 126 IFVDKILNDDAFMEKFGYVGDVYGKLWRGWETSSVTAGAETVESSCGLVEEIKTTPDSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNADTTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ G+F+HT+GD H+YNNH  Q   QLSR    LP++ +NP++  +  +   D 
Sbjct: 246 MAAQTGYEVGDFVHTIGDTHIYNNHVAQITEQLSRPMHPLPKLWLNPDVKSIFDYTMADI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  YE  A I A V+V
Sbjct: 306 KVLDYESEAPIKAPVAV 322


>gi|83716002|ref|NP_001032905.1| thymidylate synthase [Bos taurus]
 gi|122144944|sp|Q2TA32|TYSY_BOVIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|83406125|gb|AAI11140.1| Thymidylate synthetase [Bos taurus]
          Length = 354

 Score =  250 bits (638), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 175/320 (54%), Gaps = 58/320 (18%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  R DRTG GT S FG Q R++L   FPLLTTK+V WK V+ ELLWF
Sbjct: 35  QYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRDEFPLLTTKRVFWKGVLEELLWF 94

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 95  IKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWRHFGAEYKDMDS 154

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 155 EYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 214

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ--- 219
           LYQRSGD+ LG+PFNIASY+LLT M+A +   + G+F+HTLGD H+Y NH E    Q   
Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQALM 274

Query: 220 -----------------------------------LSRSPRTLPQMIINPNIVDLLSFRY 244
                                              L R PR  P++ I   +  +  F+ 
Sbjct: 275 ELRGQSSRSLDGDGQAGTSRWAPVATDTERDRCCELQREPRPFPKLKILRKVETIDDFQA 334

Query: 245 EDFTLRSYEPHAAILAKVSV 264
           EDF +  Y P+  I  +++V
Sbjct: 335 EDFQIEGYNPNPTIKMEMAV 354


>gi|68482174|ref|XP_714971.1| hypothetical protein CaO19.11033 [Candida albicans SC5314]
 gi|68482301|ref|XP_714908.1| hypothetical protein CaO19.3549 [Candida albicans SC5314]
 gi|1174838|sp|P12461|TYSY_CANAL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|7537304|gb|AAA34374.2| thymidylate synthase precursor [Candida albicans]
 gi|46436507|gb|EAK95868.1| hypothetical protein CaO19.3549 [Candida albicans SC5314]
 gi|46436572|gb|EAK95932.1| hypothetical protein CaO19.11033 [Candida albicans SC5314]
 gi|238882292|gb|EEQ45930.1| thymidylate synthase [Candida albicans WO-1]
          Length = 315

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 136/304 (44%), Positives = 177/304 (58%), Gaps = 43/304 (14%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           YLDL + +I  G  R DRTG GT+S F   Q+RFDLS   FPLLTTKKV  K ++HELLW
Sbjct: 12  YLDLCKRIIDEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F+ G ++   L   GV IW+     E+ DK       +G+LGP+YG QWR +        
Sbjct: 72  FVAGSTDAKILSEKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKDCD 131

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------ 155
            DY G   DQ+  +++ L+ +PY RR I+SAWN     KMALPPCH   QFYV+      
Sbjct: 132 SDYTGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPTSSP 191

Query: 156 -----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204
                        KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+    GEFIHTLG
Sbjct: 192 DPNNPKQAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLG 251

Query: 205 DVHLYNNHFEQADLQLSRSPRTLPQMIINP----NIVDLLSFRYEDFTLRSYEPHAAILA 260
           D H+Y +H +    Q  R P+  P+++I       I  +  F++EDF +  YEP+  I  
Sbjct: 252 DAHVYLDHIDALKEQFERIPKQFPKLVIKEERKNEIKSIDDFKFEDFEIVGYEPYPPIKM 311

Query: 261 KVSV 264
           K+SV
Sbjct: 312 KMSV 315


>gi|154331155|ref|XP_001562017.1| dihydrofolate reductase-thymidylate synthase [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134059339|emb|CAM37041.1| dihydrofolate reductase-thymidylate synthase [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 521

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 125/286 (43%), Positives = 173/286 (60%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVG  S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 236 RQYLELIDRIMKTGIAKEDRTGVGILSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 295

Query: 61  WFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD              A+K+ +LGP+YG QWR +       
Sbjct: 296 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTANKEMDLGPVYGFQWRHFGAQYKGF 355

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI SIV++++ +P  RR +++AWN   + +MALPPCH L QFYV  D  +
Sbjct: 356 EANYDGEGVDQIKSIVETIKVNPNDRRLLLTAWNPCALHEMALPPCHLLAQFYVNTDAKE 415

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH +   +
Sbjct: 416 LSCMLYQRSCDMGLGVPFNIASYALLTILMAKATGLRPGELVHTLGDAHVYRNHIDALKV 475

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R+P   P ++       L  +   D  +  Y P+  I  +++V
Sbjct: 476 QLERTPNAFPTLVFKREREFLEDYELSDMEVIDYAPYPPIKMEMAV 521


>gi|224004314|ref|XP_002295808.1| possible thymidylate synthase [Thalassiosira pseudonana CCMP1335]
 gi|209585840|gb|ACI64525.1| possible thymidylate synthase [Thalassiosira pseudonana CCMP1335]
          Length = 516

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 125/287 (43%), Positives = 176/287 (61%), Gaps = 25/287 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61
           QYL++ R +I+ G  R DRTG GT S FG QMR+ L     PLLTTK+  W+ V  ELLW
Sbjct: 230 QYLEICRDIIENGVRRGDRTGTGTLSKFGVQMRYSLRDNTLPLLTTKRTFWRGVAEELLW 289

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-------- 101
           F++G +N + L    + IWD     E+ D       ++G+LGP+YG QWR +        
Sbjct: 290 FVKGSTNANELADKNIHIWDGNGSREFLDSRGLQHREEGDLGPVYGFQWRHFGAEYKDMH 349

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKL 159
            DY G  +DQ++  +  +  +P  RR ++SAWN   +D MALPPCH   QFYVD    ++
Sbjct: 350 ADYTGQGVDQLADCIDKIINNPEDRRIVMSAWNPKDLDVMALPPCHMFCQFYVDTDRNEV 409

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQ+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH +    Q
Sbjct: 410 SCQMYQRSADMGLGVPFNIASYALLTHMIAKVTGRKAGDFVHTIGDAHVYLNHVDALKEQ 469

Query: 220 LSRSPRTLPQMIIN--PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R PR  P++ +    +  D+  F ++DF +  Y+PH  I  K++V
Sbjct: 470 LERKPRAFPKLKMKDGKDFNDIDGFEFDDFEVVGYKPHKTIKMKMAV 516


>gi|146071663|ref|XP_001463169.1| dihydrofolate reductase-thymidylate synthase [Leishmania infantum]
          Length = 395

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 130/286 (45%), Positives = 172/286 (60%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 110 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 169

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D       K+ +LGP+YG QWR +       
Sbjct: 170 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 229

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI SIV++++A+P  RR + +AWN   + KMALPPCH L QFYV  D  +
Sbjct: 230 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 289

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH      
Sbjct: 290 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 349

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH  I  +++V
Sbjct: 350 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 395


>gi|99030333|gb|ABF61432.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 120/283 (42%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY ++F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMVKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG+++ + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETDGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618


>gi|4039150|gb|AAC97508.1| thymidylate synthase [Caenorhabditis elegans]
          Length = 315

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 120/284 (42%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           ++YL  +  +++ G+ R DRTG GT S FG Q ++ L  G  PLLTTK+V+WK V+ ELL
Sbjct: 32  YKYLKQVEQILREGTRRDDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRVYWKGVLEELL 91

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WF+ G ++   L    V IW++  D+            +G+LGP+YG QWR +       
Sbjct: 92  WFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDC 151

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ++ +++ ++  P SRR I+SAWN + + +M LPPCH + QFYVDNG+LS
Sbjct: 152 HTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSDLGQMVLPPCHTMCQFYVDNGELS 211

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGD+ LG+PFN+ASY LLT M+A V G + G  +HTLGD H+Y+NH +   +QL
Sbjct: 212 CQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPGTLVHTLGDAHVYSNHVDALKIQL 271

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P   P++    ++  +  F  +   L  Y+ H  I   ++V
Sbjct: 272 DREPYAFPKIRFTRDVASIDDFTSDMIALDDYKCHPKIPMDMAV 315


>gi|224471863|sp|Q07PP0|TYSY_RHOP5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 298

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 136/293 (46%), Positives = 177/293 (60%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDLL  V++ G  R DRTGVGTR+ FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 6   HQYLDLLAQVLEKGDQRIDRTGVGTRALFGAMIRFDLSDGRVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L +  V IW +W                            A + G+LGP
Sbjct: 66  WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDSISQEDFEKRVVEDNAFATRWGDLGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +VQ+L+++P SRR +  AWN   +  MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWLGADGREYDQIAELVQTLKSNPASRRMLFHAWNPPELGAMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +GKL+C LYQRS D+ LG  FN A+ S L +MLA       GEFI   GDVHLY N
Sbjct: 186 HVTSSGKLNCILYQRSCDLLLGAAFNYAAASALQLMLAQQADLTPGEFIWFGGDVHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q+SR+PR  P M +      +  +R  DF +  YEPHAAI A V+V
Sbjct: 246 HLDQAREQISRAPRPFPTMRLTRRPDSIDGYRISDFEVDGYEPHAAIKADVAV 298


>gi|71993377|ref|NP_491532.3| hypothetical protein Y110A7A.4 [Caenorhabditis elegans]
 gi|7331734|gb|AAF60422.1| Hypothetical protein Y110A7A.4 [Caenorhabditis elegans]
          Length = 312

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 120/284 (42%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           ++YL  +  +++ G+ R DRTG GT S FG Q ++ L  G  PLLTTK+V+WK V+ ELL
Sbjct: 29  YKYLKQVEQILREGTRRDDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRVYWKGVLEELL 88

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WF+ G ++   L    V IW++  D+            +G+LGP+YG QWR +       
Sbjct: 89  WFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDC 148

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ++ +++ ++  P SRR I+SAWN + + +M LPPCH + QFYVDNG+LS
Sbjct: 149 HTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSDLGQMVLPPCHTMCQFYVDNGELS 208

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGD+ LG+PFN+ASY LLT M+A V G + G  +HTLGD H+Y+NH +   +QL
Sbjct: 209 CQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPGTLVHTLGDAHVYSNHVDALKIQL 268

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P   P++    ++  +  F  +   L  Y+ H  I   ++V
Sbjct: 269 DREPYAFPKIRFTRDVASIDDFTSDMIALDDYKCHPKIPMDMAV 312


>gi|115524163|ref|YP_781074.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
 gi|115518110|gb|ABJ06094.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
          Length = 300

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 136/293 (46%), Positives = 177/293 (60%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDLL  V++ G  R DRTGVGTR+ FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 8   HQYLDLLAQVLEKGDQRIDRTGVGTRALFGAMIRFDLSDGRVPILTTKRVYWKTAVKEML 67

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L +  V IW +W                            A + G+LGP
Sbjct: 68  WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDSISQEDFEKRVVEDNAFATRWGDLGP 127

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +VQ+L+++P SRR +  AWN   +  MALPPCH ++Q+
Sbjct: 128 VYGKQWRRWLGADGREYDQIAELVQTLKSNPASRRMLFHAWNPPELGAMALPPCHMVYQY 187

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +GKL+C LYQRS D+ LG  FN A+ S L +MLA       GEFI   GDVHLY N
Sbjct: 188 HVTSSGKLNCILYQRSCDLLLGAAFNYAAASALQLMLAQQADLTPGEFIWFGGDVHLYLN 247

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q+SR+PR  P M +      +  +R  DF +  YEPHAAI A V+V
Sbjct: 248 HLDQAREQISRAPRPFPTMRLTRRPDSIDGYRISDFEVDGYEPHAAIKADVAV 300


>gi|146276896|ref|YP_001167055.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17025]
 gi|172046015|sp|A4WQT6|TYSY_RHOS5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145555137|gb|ABP69750.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17025]
          Length = 298

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 130/293 (44%), Positives = 173/293 (59%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
             YLDLL  V+  G  R DRTGVGT S FG  +RFDLSKG  P+LTTKKV+WK+ V E+L
Sbjct: 6   QHYLDLLAQVLARGDRRVDRTGVGTLSLFGAMLRFDLSKGAAPILTTKKVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L +  V IW +W                            A + G+LGP
Sbjct: 66  WFLTGGTNIRPLLQQNVRIWTDWPLAAYRRATGEEIGQAEFEARIVADEGFAARWGDLGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ ++++LR +P SRR +  AWNVA + +MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWLGPDGREHDQIAGLIETLRTNPASRRMLFHAWNVAEVGQMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS D+ LG PFN    + L +M+A       GE +   GD HLY N
Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQADLLPGELVWVGGDTHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQA  Q+SR+PR  P+M +      +  +R EDF +  YE H AI A+V+V
Sbjct: 246 HLEQAREQISRAPRDWPRMQLVRRAESIDDYRIEDFAVEGYESHPAIAAEVAV 298


>gi|99082919|gb|ABF66633.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  249 bits (635), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 121/283 (42%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MAL PCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALLPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++ 
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMAA 618


>gi|19115217|ref|NP_594305.1| thymidylate synthase (predicted) [Schizosaccharomyces pombe 972h-]
 gi|74665572|sp|Q9UTI7|TYSY_SCHPO RecName: Full=Probable thymidylate synthase; Short=TS; Short=TSase
 gi|5725409|emb|CAB52423.1| thymidylate synthase (predicted) [Schizosaccharomyces pombe]
          Length = 625

 Score =  249 bits (635), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 131/295 (44%), Positives = 180/295 (61%), Gaps = 32/295 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59
            QYL+L+R++++ G  R DRTG GTRS F   Q+RF L +   PLLTTK+V  + V+ EL
Sbjct: 331 EQYLNLIRYILENGQSRPDRTGTGTRSVFAPPQLRFSLRNNTLPLLTTKRVFLRGVLEEL 390

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101
           LWF+ GD+N ++L   G+ IWD     E+ D       K G+LGPIYG QWR +      
Sbjct: 391 LWFIHGDTNANHLSEKGIHIWDGNGSREFLDSRGLTDRKVGDLGPIYGFQWRHFGAQYVD 450

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--- 156
              DY    +DQ++ ++ +L+ +PY RR I+SAWN   I +MALPPCH   QFYV     
Sbjct: 451 CDTDYTNKGVDQLAQVISTLKLNPYDRRIILSAWNPLAIPEMALPPCHIFCQFYVSEPCK 510

Query: 157 --GK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
             GK  LS  +YQRS D+ LG+PFNIASYSLLT M+A + G++  EF+H +GD H+YN+H
Sbjct: 511 PGGKPQLSSMMYQRSADMGLGVPFNIASYSLLTHMIAHMCGYEAAEFVHVMGDCHIYNDH 570

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLL---SFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL R P+  P++    +  D+    SF  +DF +  Y P+  I  K+SV
Sbjct: 571 LEALQTQLERVPKAFPKLFFKRDAKDIGSIDSFSVDDFAVEGYNPYGPIKMKMSV 625


>gi|296283919|ref|ZP_06861917.1| thymidylate synthase [Citromicrobium bathyomarinum JL354]
          Length = 310

 Score =  249 bits (635), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 133/303 (43%), Positives = 175/303 (57%), Gaps = 40/303 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
            QYLDL+ H+ + G +R DRTG+GTRS FG Q+R  L+    PLLTTK+V+WK+   E L
Sbjct: 8   QQYLDLMAHIWRTGDERVDRTGIGTRSVFGAQLRCSLTDNAVPLLTTKRVYWKTAARETL 67

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------ADKD------GELGP 92
           WFL G +N+  L   GV IW+EW                      AD +      G+LGP
Sbjct: 68  WFLTGATNIRPLVLQGVKIWNEWPHARYVKETGDDLPLDDFVQRIADDESFAARWGDLGP 127

Query: 93  IYGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           +YG QW  WP Y          G  IDQ+S ++ SLR +P SRRHI+  WNVA +D+MAL
Sbjct: 128 VYGKQWVDWPTYRYRPDGLYEKGEGIDQVSQVIDSLRTNPGSRRHIIEGWNVAELDRMAL 187

Query: 144 PPCHCLFQFYVD-NG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
           PPCH  +QF+V  NG +L+C LYQRS DV LG+PFN+   +LLT M+A     + GE + 
Sbjct: 188 PPCHKTYQFHVGANGTQLNCLLYQRSCDVALGLPFNLFGAALLTRMIAQQTDLEPGELVW 247

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
             GD HLY NH    + QL R PR  P++ I      +  +  EDF++  Y+PH  I A 
Sbjct: 248 MGGDTHLYLNHAHLIEEQLGREPRGAPRLEITRRPPGIFDYAIEDFSVSGYDPHPPIKAP 307

Query: 262 VSV 264
           V+V
Sbjct: 308 VAV 310


>gi|86137413|ref|ZP_01055990.1| Thymidylate synthase [Roseobacter sp. MED193]
 gi|85825748|gb|EAQ45946.1| Thymidylate synthase [Roseobacter sp. MED193]
          Length = 298

 Score =  249 bits (635), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 129/293 (44%), Positives = 172/293 (58%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLDL+  V++ G +R DRTGVGTRS FG  +RFDLS G  P+ TTK+V+WK+ V E+L
Sbjct: 6   YQYLDLMERVLEQGDERIDRTGVGTRSLFGAMVRFDLSDGTAPIFTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L +  V IW +W                            A + GELGP
Sbjct: 66  WFLTGQTNIQSLLKDNVRIWTDWPLATYRRETGEDVSQEEFEQRVVNDDAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +V++LR  P SRR +   WNVA + +MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWMGADGREHDQIAGLVRALRETPASRRMLFHGWNVAELGEMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+C L+QRS D+ LG PFN    S L +MLA       GE +   GDVHLY N
Sbjct: 186 HVTSDGRLNCLLFQRSVDLLLGKPFNCVGASALLLMLAQQADLVPGELVWVGGDVHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           HFEQA  Q+ R PR  P+M +      +  +   DF +  Y PH  I A+V+V
Sbjct: 246 HFEQAREQIKRQPRPFPKMSLLKRAASIDDYEIGDFQVDGYAPHPPISAEVAV 298


>gi|126274226|ref|XP_001387889.1| Thymidylate synthase [Scheffersomyces stipitis CBS 6054]
 gi|126213759|gb|EAZ63866.1| Thymidylate synthase [Pichia stipitis CBS 6054]
          Length = 316

 Score =  248 bits (634), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 134/307 (43%), Positives = 180/307 (58%), Gaps = 44/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
             YLDL   +I  G  R DRTG GT+S F   Q+RFDLS   FPLLTTKKV  + ++HEL
Sbjct: 10  QAYLDLCEKIINEGEFRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSRGIIHEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101
           LWF+ G ++   L   GV IW+     E+ D       ++G+LGP+YG QWR +      
Sbjct: 70  LWFVAGSTDAKLLSEKGVKIWEGNGSREFLDNLGLTHRREGDLGPVYGFQWRHFGAEYKD 129

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ++ +++ L+ +PY RR I+SAWN     KMALPPCH   QF+V     
Sbjct: 130 CDADYTGQGYDQLADVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFFVSFPST 189

Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
                           KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++    GEFIH
Sbjct: 190 NPESNTSKQAKAETRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIH 249

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----FRYEDFTLRSYEPHAA 257
           TLGD H+Y +H +    QL+R+P+  P+++I     D ++    FR+EDF +  YEP+  
Sbjct: 250 TLGDAHVYLDHIDAIKEQLTRTPKDFPKLLIKEERKDKITSIDDFRFEDFEIVGYEPYPP 309

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 310 IKMKMSV 316


>gi|118935|sp|P16126|DRTS_LEIAM RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|9471|emb|CAA36020.1| unnamed protein product [Leishmania amazonensis]
          Length = 520

 Score =  248 bits (634), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 128/286 (44%), Positives = 171/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIAKEDRTGVGTLSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D  G       +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENTEMDLGPVYGFQWRHFGAEYRGL 354

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-- 158
             +YDG  +DQI  IV++++A+P  RR + +AWN   + KMALPPCH L QFYV+  K  
Sbjct: 355 EANYDGEGVDQIKFIVETIKANPNDRRLLFTAWNPCALHKMALPPCHLLAQFYVNTEKSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y +H +    
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRSHIDALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH  I  +++V
Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELMDMEVIDYVPHPPIKMEMAV 520


>gi|15078937|ref|NP_149688.1| 225R [Invertebrate iridescent virus 6]
 gi|82039411|sp|Q9WBI3|TYSY_IIV6 RecName: Full=Probable thymidylate synthase 225R
 gi|4494906|gb|AAD21329.1| 225R [Invertebrate iridescent virus 6]
          Length = 295

 Score =  248 bits (634), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 133/290 (45%), Positives = 186/290 (64%), Gaps = 31/290 (10%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LL  V+  G DR DRTG+GT++ FG Q++F+L   FPLLTTKKV WK VV ELLWF
Sbjct: 9   QYLNLLEKVLFQGEDRDDRTGIGTKNVFGEQLKFNLRTSFPLLTTKKVFWKGVVEELLWF 68

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWPD--------YD 105
           + G ++VS L++ GV IW++ A+         K  +LGPIYG QWR + +        Y 
Sbjct: 69  ISGSTDVSVLNQKGVKIWNKNAESFYTQQNLFKKNDLGPIYGFQWRHYGENYIGCDNKYG 128

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---NGK--LS 160
           G  IDQ+ +I+ +++ +P+ RR I+ AWN     KMALPPCHC+  F V    NGK  LS
Sbjct: 129 G--IDQLKNIITTIQNEPWDRRMILLAWNPKDNSKMALPPCHCIAHFDVSSKINGKRELS 186

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY-----GEFIHTLGDVHLYNNHFEQ 215
           C L+QRS D+ LG+PFNIASY+LLT ++A V          G+F+HTL +VH+Y NH + 
Sbjct: 187 CHLFQRSADMGLGVPFNIASYALLTHIIAHVSSTNTELIVPGDFVHTLSNVHIYKNHIKA 246

Query: 216 ADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              Q+SR PR  P + IIN N  ++ +F  +DF L+ Y P+ A+  ++++
Sbjct: 247 LTEQISRIPRKFPTLEIINKN-KNIDAFSSKDFVLKDYNPYPALEMEMAL 295


>gi|198423472|ref|XP_002121808.1| PREDICTED: similar to Thymidylate synthase (TSase) (TS), partial
           [Ciona intestinalis]
          Length = 261

 Score =  248 bits (633), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 122/261 (46%), Positives = 158/261 (60%), Gaps = 20/261 (7%)

Query: 24  VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-- 81
            GT+S FG QMRFDL   FPLLTTK+V W+ V  ELLWF+RG +N   L    V IWD  
Sbjct: 1   TGTKSIFGCQMRFDLRTSFPLLTTKRVFWRGVAEELLWFIRGSTNAKELADKNVHIWDAN 60

Query: 82  ---EWADKDG-------ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADP 123
              ++ D  G       +LGP+YG QWR +         DY    +DQ+  ++ ++R +P
Sbjct: 61  GSRKFLDNIGLTEREEFDLGPVYGFQWRHYGAEYKDMHSDYTNQGVDQLKKVIDTIRTNP 120

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
             RR I+ AWN   + KMALPPCH   QFYV NG+LSCQLYQRS D+ LG+PFNIASYSL
Sbjct: 121 NDRRIIMCAWNPVDLPKMALPPCHAFAQFYVCNGELSCQLYQRSADMGLGVPFNIASYSL 180

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A V G + G+F+HTLGD H+Y NH E    QL R PR  P +    ++  +    
Sbjct: 181 LTCMIAHVTGLKPGDFVHTLGDAHVYLNHIEPLKEQLKREPRPFPTLKFKRDVNSIDEIT 240

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            ED  L  Y+PH  I  ++++
Sbjct: 241 MEDLVLEGYKPHKKIQMEMAL 261


>gi|6686065|sp|O96650|TYSY_ASCSU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|4039148|gb|AAC97507.1| thymidylate synthase [Ascaris suum]
          Length = 294

 Score =  248 bits (633), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 130/283 (45%), Positives = 170/283 (60%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           +YL  ++H+I  G    DRTGVGT S FG    + L  G  PLLTTK+V+WK VV ELLW
Sbjct: 12  KYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F++GD++   L   GV IWD     E+ D        +G+LGPIYG QWR +        
Sbjct: 72  FIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYHGTD 131

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ +++ ++ +P SRR I++AWNV  + +MALPPCH L QF V NG+LSC
Sbjct: 132 ADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVKNGELSC 191

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFN+ASY LLT M+A V   + G   H LGD H+Y NH +    QLS
Sbjct: 192 QLYQRSGDMGLGVPFNLASYGLLTHMIAHVCALKTGFLHHVLGDAHVYLNHIDALKEQLS 251

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P +     I  +  F  E   L  Y P A I   ++V
Sbjct: 252 RDPRPFPTVHFEGRIDSIDDFTAESIILNGYNPMAPIKMPMAV 294


>gi|294655762|ref|XP_002770180.1| DEHA2C06094p [Debaryomyces hansenii CBS767]
 gi|199430584|emb|CAR65545.1| DEHA2C06094p [Debaryomyces hansenii]
          Length = 316

 Score =  248 bits (633), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 133/307 (43%), Positives = 181/307 (58%), Gaps = 44/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
             YLDL   +I  G  R DRTG GT+S F   Q+RF+LS   FPLLTTKKV  ++++HEL
Sbjct: 10  QTYLDLCERIINEGEHRPDRTGTGTKSLFAPPQLRFNLSDDTFPLLTTKKVFSRAIIHEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------ 101
           LWF++G ++   L   GV IW+     E+ D       ++G+LGP+YG QWR +      
Sbjct: 70  LWFVQGCTDAKKLSEKGVKIWEGNGSREYLDSIGLTDRREGDLGPVYGFQWRHFGAEYKD 129

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ+  +++ L+ +PY RR I+SAWN     KMALPPCH   QFYV+    
Sbjct: 130 CDADYSGQGVDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPNE 189

Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
                           KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++    GEFIH
Sbjct: 190 TPDSNTNKQQKTSSRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIH 249

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----FRYEDFTLRSYEPHAA 257
           TLGD H+Y +H +    QL R+P+  P++II     D +     F++EDF +  Y+P+  
Sbjct: 250 TLGDAHVYLDHVDALKEQLVRTPKDFPKLIIKEERKDEIKSIDDFKFEDFEIIGYDPYGP 309

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 310 IKMKMSV 316


>gi|322488320|emb|CBZ23567.1| dihydrofolate reductase-thymidylate synthase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 520

 Score =  248 bits (633), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 129/286 (45%), Positives = 170/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIAKEDRTGVGTLSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D  G       +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENTEMDLGPVYGFQWRHFGAEYRGL 354

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-- 158
             +YDG  +DQI  IV++++A+P  RR + +AWN   + KMALPPCH L QFYV+  K  
Sbjct: 355 EANYDGEGVDQIKFIVETIKANPNDRRLLFTAWNPCALHKMALPPCHLLAQFYVNTEKSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y +H      
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRSHIGALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH AI   ++V
Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELMDMEVIDYVPHPAIKMDMAV 520


>gi|51894252|ref|YP_076943.1| thymidylate synthase [Symbiobacterium thermophilum IAM 14863]
 gi|62901280|sp|Q67JQ1|TYSY_SYMTH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|51857941|dbj|BAD42099.1| thymidylate synthase [Symbiobacterium thermophilum IAM 14863]
          Length = 283

 Score =  248 bits (632), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 128/278 (46%), Positives = 176/278 (63%), Gaps = 16/278 (5%)

Query: 3   QYLDLLRHV-------IKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSV 55
           QYL+L R +       I  G    +RTG+GT   FG  ++ D  +GFP LTTKK+ + SV
Sbjct: 6   QYLELCREILAENEQEIAEGRWTPNRTGMGTVGVFGRMLKHDFKEGFPALTTKKLFFNSV 65

Query: 56  VHELLWFLRGDSNVSYLHRHGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISS 114
             ELLWFL G +++ +LH  G  IWD+ A ++G +LGPIYG QWR+W   DG   DQI+ 
Sbjct: 66  KAELLWFLAGRTDLEFLHERGCHIWDKDAARNGGKLGPIYGKQWRAWEGADGRTYDQIAW 125

Query: 115 IVQSLR---ADPY-----SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           ++Q +R   ADP      SRR +VS WNVA +++MALPPCH  FQF+V +G+L   ++QR
Sbjct: 126 VIQQIREIAADPERPHPNSRRLVVSPWNVADLEEMALPPCHGPFQFHVKDGRLHLAVWQR 185

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S D+FLG+PFNIASYSLL  M+A V G   G + H L DVH+Y N  +Q  LQL+R P  
Sbjct: 186 SADLFLGVPFNIASYSLLLHMVAQVTGLAVGTYTHYLNDVHIYRNLLDQVRLQLTREPYP 245

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           LP++ +NP + ++  F  +D  L  Y+ H  I  ++S 
Sbjct: 246 LPRLWLNPEVREIDQFTMDDIQLVDYKHHPPIRGELST 283


>gi|324519207|gb|ADY47314.1| Thymidylate synthase [Ascaris suum]
          Length = 312

 Score =  248 bits (632), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 130/283 (45%), Positives = 170/283 (60%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           +YL  ++H+I  G    DRTGVGT S FG    + L  G  PLLTTK+V+WK VV ELLW
Sbjct: 30  KYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEELLW 89

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F++GD++   L   GV IWD     E+ D        +G+LGPIYG QWR +        
Sbjct: 90  FIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYHGTD 149

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ +++ ++ +P SRR I++AWNV  + +MALPPCH L QF V NG+LSC
Sbjct: 150 ADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVRNGELSC 209

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFN+ASY LLT M+A V   + G   H LGD H+Y NH +    QLS
Sbjct: 210 QLYQRSGDMGLGVPFNLASYGLLTHMIAHVCALKTGFLHHVLGDAHVYLNHIDALKEQLS 269

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P +     I  +  F  E   L  Y P A I   ++V
Sbjct: 270 RDPRPFPTVHFEGRIDSIDDFTAESIILNGYNPMAPIKMPMAV 312


>gi|77463962|ref|YP_353466.1| thymidylate synthase [Rhodobacter sphaeroides 2.4.1]
 gi|123591492|sp|Q3J0W9|TYSY_RHOS4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|77388380|gb|ABA79565.1| thymidylate synthase [Rhodobacter sphaeroides 2.4.1]
          Length = 298

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 175/293 (59%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDLL   ++ G  R DRTGVGT S FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 6   QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSGGQVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L +  V IW +W                            A + GELGP
Sbjct: 66  WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEEISQAAFEQRVLEDEAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG+  DQI++++++LR +P SRR +  AWNVA + +MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWLGPDGHEHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS D+ LG PFN    + L +M+A   G   G+ +   GD HLY N
Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q  R+PR  P+M +      +  +R EDF +  Y+PH AI A+V+V
Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298


>gi|221639818|ref|YP_002526080.1| Thymidylate synthase [Rhodobacter sphaeroides KD131]
 gi|221160599|gb|ACM01579.1| Thymidylate synthase [Rhodobacter sphaeroides KD131]
          Length = 298

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 175/293 (59%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDLL   ++ G  R DRTGVGT S FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 6   QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSGGQVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L +  V IW +W                            A + GELGP
Sbjct: 66  WFLAGGTNIRPLLQENVRIWSDWPLAAYRRESGEQISQAAFEQRILEDEAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG+  DQI++++++LR +P SRR +  AWNVA + +MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWLGPDGHEHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS D+ LG PFN    + L +M+A   G   G+ +   GD HLY N
Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q  R+PR  P+M +      +  +R EDF +  Y+PH AI A+V+V
Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298


>gi|332558834|ref|ZP_08413156.1| thymidylate synthase [Rhodobacter sphaeroides WS8N]
 gi|332276546|gb|EGJ21861.1| thymidylate synthase [Rhodobacter sphaeroides WS8N]
          Length = 298

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 174/293 (59%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDLL   ++ G  R DRTGVGT S FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 6   QQYLDLLTQTLERGDRRVDRTGVGTLSLFGAMLRFDLSDGQVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L +  V IW +W                            A + GELGP
Sbjct: 66  WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEQISQAAFEQRILEDEAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI++++++LR +P SRR +  AWNVA + +MALPPCH ++Q+
Sbjct: 126 VYGRQWRRWLGPDGREHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS D+ LG PFN    + L +M+A   G   G+ +   GD HLY N
Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWMGGDTHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q  R+PR  P+M +      +  +R EDF +  Y+PH AI A+V+V
Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298


>gi|254670154|emb|CBA05192.1| Thymidylate synthase [Neisseria meningitidis alpha153]
          Length = 189

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 115/191 (60%), Positives = 139/191 (72%), Gaps = 10/191 (5%)

Query: 74  RHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
           R   + WD +   +G +GP            DG  IDQI+++V+ ++ +P SRR IVSAW
Sbjct: 9   RTKTATWDRFTATNGAVGPAP----------DGRHIDQIANVVEQIKKNPDSRRLIVSAW 58

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G
Sbjct: 59  NPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTMMMAQVCG 118

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD HLY NHFEQA+LQL R PRTLP M INP + DL SF++EDF L  Y+
Sbjct: 119 LEAGEFIHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLFSFKFEDFELEGYD 178

Query: 254 PHAAILAKVSV 264
           PH  I A VSV
Sbjct: 179 PHPHIKAAVSV 189


>gi|126462805|ref|YP_001043919.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17029]
 gi|171855224|sp|A3PLD1|TYSY_RHOS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|126104469|gb|ABN77147.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17029]
          Length = 298

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 174/293 (59%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDLL   ++ G  R DRTGVGT S FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 6   QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSDGQVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G +N+  L +  V IW +W                            A + GELGP
Sbjct: 66  WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEEISQAAFEQRILEDEAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI++++++LR +P SRR +  AWNVA + +MALPPCH ++Q+
Sbjct: 126 VYGRQWRRWLGPDGREHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS D+ LG PFN    + L +M+A   G   G+ +   GD HLY N
Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q  R+PR  P+M +      +  +R EDF +  Y+PH AI A+V+V
Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRQADGIDDYRIEDFAVEGYDPHPAIAAEVAV 298


>gi|224103383|ref|XP_002313034.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
 gi|222849442|gb|EEE86989.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
          Length = 414

 Score =  246 bits (627), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 125/281 (44%), Positives = 165/281 (58%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L++ +I  G+ +  R G GT S FG QMRF+L K FP LTTKKV W+ VV ELLWF+
Sbjct: 134 YLRLVQDIITDGNLKDGRAGTGTLSKFGCQMRFNLRKTFPFLTTKKVFWRGVVEELLWFI 193

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD  A +D            G+LGP YG QWR +         D
Sbjct: 194 SGSTNAKVLQEKGIHIWDGNASRDYLDSVGLKDREEGDLGPFYGFQWRHFGARYTDMHAD 253

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  +R +P  R  ++SAWN   +  M LPPCH   QFYV NG+LSCQ+
Sbjct: 254 YTGQGFDQLLDVIDKIRNNPNDRGIVLSAWNPTDLKLMVLPPCHMFVQFYVANGELSCQM 313

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PF+IASY+LLT ++A V     G+FIH +GD H+Y+ H      QL + 
Sbjct: 314 YQRSADMGLGVPFSIASYALLTHIIAHVCDLVPGDFIHVIGDAHVYHTHIRPLQEQLHKL 373

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + IN    D+ SF   DF L  Y+PH  I  K++V
Sbjct: 374 PKPFPILKINSEKKDIDSFVAADFELIGYDPHQKIEMKMAV 414


>gi|213409892|ref|XP_002175716.1| thymidylate synthase [Schizosaccharomyces japonicus yFS275]
 gi|212003763|gb|EEB09423.1| thymidylate synthase [Schizosaccharomyces japonicus yFS275]
          Length = 619

 Score =  245 bits (626), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 134/295 (45%), Positives = 177/295 (60%), Gaps = 32/295 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL++ +++ G  R DRTG GTRS F   Q+RF LS    PLLTTKKV  + V+ EL
Sbjct: 325 QQYLDLIKRILETGELRNDRTGTGTRSIFAPPQLRFSLSNNTLPLLTTKKVFLRGVLQEL 384

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------ 101
           LWFLRGD+N  +L    + IWD     E+ DK       +G+LGP+YG QWR +      
Sbjct: 385 LWFLRGDTNAKHLTEKDIHIWDGNGSREFLDKMGFFDRAEGDLGPVYGFQWRHFGAKYTD 444

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ++ +V  L+ +P  RR I+SAWN A I +MALPPCH L QFYV     
Sbjct: 445 CNADYTGQGVDQLAQVVHQLKNNPNDRRIIMSAWNPAAIPQMALPPCHLLCQFYVSAPAQ 504

Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                +LSC +YQRS D+ LG+PFNIASYSLLT MLA    ++  EFIH +GD H+Y +H
Sbjct: 505 PGGRPRLSCMMYQRSADMGLGVPFNIASYSLLTHMLAHYCNYEAHEFIHVMGDCHIYIDH 564

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264
            E    QL+R P   P++    +  ++ S   + Y+DF +  Y P   I  K+SV
Sbjct: 565 IEALRTQLARKPLPFPKIHFRRSPREVGSIDGYEYDDFVVEGYNPWGPIKMKMSV 619


>gi|260950885|ref|XP_002619739.1| thymidylate synthase [Clavispora lusitaniae ATCC 42720]
 gi|238847311|gb|EEQ36775.1| thymidylate synthase [Clavispora lusitaniae ATCC 42720]
          Length = 317

 Score =  245 bits (625), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/308 (44%), Positives = 177/308 (57%), Gaps = 45/308 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
             YLDL + +I+ G  R DRTG GTRS F   Q+RFDLS   FPLLTTK+V  K ++HEL
Sbjct: 10  QAYLDLCQKIIEEGEFRPDRTGTGTRSLFAPPQLRFDLSNDTFPLLTTKRVFSKGIIHEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------ 101
           LWF+ G ++   L   GV IW+     E+ DK       +G+LGP+YG QWR +      
Sbjct: 70  LWFVEGCTDAKKLSAKGVRIWEGNGSREYLDKMGLTDRREGDLGPVYGFQWRHFGAEYKT 129

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ+  +++ L+ +PY RR I+SAWN     KMALPPCH   QFYV     
Sbjct: 130 CDDDYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFCQFYVSFPQP 189

Query: 156 ---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
                            KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+    GEFI
Sbjct: 190 SSPEPYAPKSTKSQARPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFI 249

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL----SFRYEDFTLRSYEPHA 256
           HTLGD H+Y +H +    QL R+P+  P++ I  +  D +     F ++DF +  YEP  
Sbjct: 250 HTLGDAHVYLDHIDALKTQLERTPKQFPKLFIKESRKDEIRSIDDFTFDDFEIVGYEPLP 309

Query: 257 AILAKVSV 264
           AI   +SV
Sbjct: 310 AIKMNMSV 317


>gi|1480449|gb|AAC47229.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Cryptosporidium parvum]
          Length = 499

 Score =  244 bits (624), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 122/261 (46%), Positives = 169/261 (64%), Gaps = 21/261 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  +S+  EL+WF
Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW--------P 102
           ++GD+N ++L    V IW      E+ ++ G       +LGPIYG QWR +         
Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478

Query: 222 RSPRTLPQMIINPNIVDLLSF 242
           R+PR  PQ+     + ++  F
Sbjct: 479 RTPRPFPQLKFKRKVENIEDF 499


>gi|321468900|gb|EFX79883.1| hypothetical protein DAPPUDRAFT_319193 [Daphnia pulex]
          Length = 255

 Score =  244 bits (622), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 118/243 (48%), Positives = 156/243 (64%), Gaps = 20/243 (8%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGE 89
           FPLLTTK+V W+ ++ ELLWF+RG +N + L    + IWD     E+ D       ++G 
Sbjct: 13  FPLLTTKRVFWRGLMEELLWFVRGSTNANKLREKDIHIWDGNSSREFLDSLGLKDREEGG 72

Query: 90  LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGPIYG QWR +         DY    +DQ+ +++ ++R +P  RR I++AWN + +  M
Sbjct: 73  LGPIYGFQWRHFGANYDNMHSDYSCQGVDQLKNLINTIRTNPDDRRMILTAWNPSALPLM 132

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
           ALPPCHCL QFYV NG+LSCQ+YQRS DV LG+PFNIASYSLLT M+A V G   GEFIH
Sbjct: 133 ALPPCHCLAQFYVANGELSCQMYQRSADVGLGVPFNIASYSLLTCMIARVTGLNPGEFIH 192

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
           TLGD H+YNNH    + QL R PR  P + I   + D+  F+ +DF L  Y+PH  I   
Sbjct: 193 TLGDAHVYNNHISALEKQLERQPRPFPTLKIIRKVSDIDDFKADDFVLEGYDPHPKIPMD 252

Query: 262 VSV 264
           ++V
Sbjct: 253 MAV 255


>gi|328771286|gb|EGF81326.1| hypothetical protein BATDEDRAFT_10605 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 333

 Score =  243 bits (620), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 175/311 (56%), Gaps = 49/311 (15%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           QYLDL+R +I  G  R+DRTG GT S F   Q+RF L+    PLLTTK+   + V  EL+
Sbjct: 23  QYLDLVRQIIGTGDLRKDRTGTGTLSLFAPPQLRFSLADNTLPLLTTKRTFLRPVFEELM 82

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW------- 101
           WF+RG ++   L   GV IWD     E  D+       +G+LGPIYG QWR +       
Sbjct: 83  WFIRGQTDSKILAGKGVHIWDANGSREALDRAGLGHRQEGDLGPIYGFQWRHFGASYENA 142

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG--- 157
             DY G  IDQ+  +++ L ++P  RR I+SAWN   I  MALPPCH L Q YV      
Sbjct: 143 DTDYTGKGIDQLEKVIEQLVSNPTDRRIILSAWNPLAIPDMALPPCHILAQLYVSTPSET 202

Query: 158 ----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
               +LSCQLYQRS D+ LG+PFNIASYSLLT+MLA V GF+ GEFIH LGD H+Y NH 
Sbjct: 203 HPVPRLSCQLYQRSCDMGLGVPFNIASYSLLTIMLAHVCGFEPGEFIHCLGDTHVYCNHI 262

Query: 214 EQADLQLSRSPRTLPQMIINPN--------------------IVDLLSFRYEDFTLRSYE 253
           +    QL R+PR  P++ I  N                    + ++ +F YE   +  Y 
Sbjct: 263 DALQTQLERTPRPFPKIFIKRNDTGTQSSDTVESTAQKVARLVREMETFEYEHIDVVGYT 322

Query: 254 PHAAILAKVSV 264
           PH  I   +SV
Sbjct: 323 PHNKIAMDMSV 333


>gi|331242472|ref|XP_003333882.1| thymidylate synthase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309312872|gb|EFP89463.1| thymidylate synthase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 306

 Score =  243 bits (620), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 128/293 (43%), Positives = 178/293 (60%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +QYL+L+RHVI  G  R DRTG GTRS F   Q+RF LS    PL+TTKKVH KS++HEL
Sbjct: 14  YQYLNLIRHVIHHGQLRPDRTGTGTRSCFAPQQLRFTLSDSTLPLITTKKVHTKSIIHEL 73

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+R  ++   L   GV IWD    +             G LGPIYG QWR +      
Sbjct: 74  LWFIRASTSTQDLSAAGVRIWDPNGSRSYLDSVGLKEYETGTLGPIYGFQWRHFGASYQG 133

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ+ +++ S+   P  RR I++AWN A + +MALPPCH + QFYV     
Sbjct: 134 PNHDYSGQGVDQLKNLIDSIINRPTDRRMILTAWNPAALHEMALPPCHMMCQFYVTLPDE 193

Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                +LS  LYQRS D+ LG+PFNI SY+LL  M+A V   +  E +  LGD H+Y+NH
Sbjct: 194 DHPKPRLSAILYQRSADLGLGLPFNITSYALLVHMIAQVTKTEPFELVIQLGDAHVYSNH 253

Query: 213 FEQ-ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +  +++QL+R+P   P++ +NP++ D+  F++EDF +  Y PH  +  ++SV
Sbjct: 254 IKPLSEVQLTRTPNPFPKIKLNPSVTDIDHFKFEDFQILDYSPHPRVEMEMSV 306


>gi|325120559|emb|CBZ56113.1| Bifunctional dihydrofolate reductase-thymidylate synthase, related
           [Neospora caninum Liverpool]
          Length = 690

 Score =  243 bits (619), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 178/334 (53%), Gaps = 72/334 (21%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL+  +I  G+   DRTGVG  S FG  MRF L K FPLLTTK+V WK V+ ELLWF
Sbjct: 357 QYLDLIADIINNGATMDDRTGVGVISKFGCTMRFSLDKAFPLLTTKRVFWKGVLEELLWF 416

Query: 63  LRGDSNVSYLHRHGVS-------------------------------------------- 78
           +RGD+N ++L   GV                                             
Sbjct: 417 IRGDTNANHLSEKGVKASLQAPLLSFRLLRRLGAFLRGVTPPRLHAYIECTRLSSRPSAA 476

Query: 79  -----IWDEWADKD------------GELGPIYGVQWRSW--------PDYDGNVIDQIS 113
                IWD+   ++            G++GP YG QWR +         DY G  +DQ+ 
Sbjct: 477 FAGPRIWDKNVTREFLDSRNLSHREVGDIGPGYGFQWRHFGATYKDMHTDYTGQGVDQLK 536

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSCQLYQRSGDVFL 172
            ++  LR +P  RR +++AWN A +D+MALPPCH L QFYV+N + LSC +YQRS DV L
Sbjct: 537 KVINMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVENDRDLSCVMYQRSCDVGL 596

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP--QM 230
           G+PFNIASYSLLT+M+A V   +  EFIH +G+ H+Y+NH E    QL R PR  P   +
Sbjct: 597 GVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYSNHVEALKEQLRREPRPFPIVNI 656

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +    I ++  F  EDF +  Y PH  I  +++V
Sbjct: 657 LNKERIQEIDDFTAEDFEVVGYVPHGRIQMEMAV 690


>gi|87199994|ref|YP_497251.1| thymidylate synthase [Novosphingobium aromaticivorans DSM 12444]
 gi|87135675|gb|ABD26417.1| thymidylate synthase [Novosphingobium aromaticivorans DSM 12444]
          Length = 316

 Score =  243 bits (619), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 131/301 (43%), Positives = 174/301 (57%), Gaps = 39/301 (12%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL+R + + G +R DRTGVGTRS FG ++RFDLS G  PLLTTK+V+WK+   E LW
Sbjct: 16  QYLDLMRRIWEHGDERVDRTGVGTRSVFGAELRFDLSDGRMPLLTTKRVYWKTATREFLW 75

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------ADKD---------------GELGPI 93
           FL G++N+  L   GV IW +W             + KD               G+LGP+
Sbjct: 76  FLTGNTNIRPLCAQGVEIWTDWPLDRYRKETGDDISRKDFSARIVADEAFALRWGDLGPV 135

Query: 94  YGVQWRSWPDY----DG------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           YG QW  WP +    DG        ++Q++ +V SLR +P SRRHI+  WNVA ID+MAL
Sbjct: 136 YGKQWVDWPVFEPVGDGLFRRREAGVNQVADVVDSLRHNPGSRRHIIEGWNVAEIDRMAL 195

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           PPCH  +QF+V   +L+  LYQRS DV LG+PFN+   +LL  +LA     Q GE +   
Sbjct: 196 PPCHKTYQFHVSGNRLNGLLYQRSCDVALGLPFNLWGAALLVRLLAQQCDLQPGELVWMG 255

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           GD HLY NH +  + QLSR P   P++ I      +  +R EDF +  Y P   + A V+
Sbjct: 256 GDTHLYLNHADLVEAQLSREPEGDPRLAILRRPDSIFGYRIEDFEVTGYAPQGHLSAPVA 315

Query: 264 V 264
           V
Sbjct: 316 V 316


>gi|224471862|sp|Q2G6V6|TYSY_NOVAD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 314

 Score =  243 bits (619), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 131/301 (43%), Positives = 174/301 (57%), Gaps = 39/301 (12%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL+R + + G +R DRTGVGTRS FG ++RFDLS G  PLLTTK+V+WK+   E LW
Sbjct: 14  QYLDLMRRIWEHGDERVDRTGVGTRSVFGAELRFDLSDGRMPLLTTKRVYWKTATREFLW 73

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------ADKD---------------GELGPI 93
           FL G++N+  L   GV IW +W             + KD               G+LGP+
Sbjct: 74  FLTGNTNIRPLCAQGVEIWTDWPLDRYRKETGDDISRKDFSARIVADEAFALRWGDLGPV 133

Query: 94  YGVQWRSWPDY----DG------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           YG QW  WP +    DG        ++Q++ +V SLR +P SRRHI+  WNVA ID+MAL
Sbjct: 134 YGKQWVDWPVFEPVGDGLFRRREAGVNQVADVVDSLRHNPGSRRHIIEGWNVAEIDRMAL 193

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           PPCH  +QF+V   +L+  LYQRS DV LG+PFN+   +LL  +LA     Q GE +   
Sbjct: 194 PPCHKTYQFHVSGNRLNGLLYQRSCDVALGLPFNLWGAALLVRLLAQQCDLQPGELVWMG 253

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           GD HLY NH +  + QLSR P   P++ I      +  +R EDF +  Y P   + A V+
Sbjct: 254 GDTHLYLNHADLVEAQLSREPEGDPRLAILRRPDSIFGYRIEDFEVTGYAPQGHLSAPVA 313

Query: 264 V 264
           V
Sbjct: 314 V 314


>gi|294506312|ref|YP_003570370.1| thymidylate synthase [Salinibacter ruber M8]
 gi|294342640|emb|CBH23418.1| thymidylate synthase [Salinibacter ruber M8]
          Length = 294

 Score =  242 bits (618), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/296 (43%), Positives = 174/296 (58%), Gaps = 34/296 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L+ ++  G+   DRTG GT   FG Q+RFDL++GFPLLTTK+V  + V  ELL
Sbjct: 1   MRQYLDYLQDILDHGTRHEDRTGTGTIRVFGRQLRFDLTEGFPLLTTKRVWMRGVTEELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFLRG++N+  L + GVSIW +W                            A++ G+LGP
Sbjct: 61  WFLRGETNIQSLVQAGVSIWTDWPLQRYRDETGDEISQEAFEERIATDDAFAEQWGDLGP 120

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR +   +G V DQI  +V+ LR  P+SRRH+VSAW+ A I+  ALPPCH  FQ 
Sbjct: 121 VYGTQWRDFEGPEGRV-DQIERLVRGLRETPHSRRHVVSAWHPAQIEDAALPPCHYAFQC 179

Query: 153 YVD----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           +V+    +G+LS    QRS D FLG+PFNIASY+LLT MLA   G    E I   GD H+
Sbjct: 180 FVEGEPGDGRLSLMWQQRSVDSFLGLPFNIASYALLTRMLAQQAGLTPHELIFNGGDCHI 239

Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Y NH EQ + QL+R+P   P + +      +     +D  +  YE H A+ A ++V
Sbjct: 240 YQNHVEQVEEQLTRTPYDRPTLRLRQRD-SIFEHAADDVAIEDYEHHPALTAPIAV 294


>gi|224471864|sp|Q1GTH6|TYSY_SPHAL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 311

 Score =  242 bits (618), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/302 (44%), Positives = 177/302 (58%), Gaps = 40/302 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHELLW 61
           QYLDL+R +   G +R DRTGVGTRS FG  MRF L     PLLTTK+V+WK+ + ELLW
Sbjct: 10  QYLDLMRRIWVDGDERVDRTGVGTRSLFGETMRFSLKDDAIPLLTTKRVYWKTALRELLW 69

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-----------------------ADKD-----GELGPI 93
           FL GD+N+  L   GV IW +W                       AD D     G+LGP+
Sbjct: 70  FLTGDTNIRPLVAQGVKIWTDWPLEKYRKATGEAISATDFEARIVADADFAAKWGDLGPV 129

Query: 94  YGVQWRSWPDYD---GNVI-------DQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           YG QW +WP Y+   G +        +QI++++ SL+ +P SRRHI + WNVA +D+MAL
Sbjct: 130 YGHQWVNWPRYEPAGGGLFRRADHGYNQIAALIDSLKNNPGSRRHIFTGWNVADLDRMAL 189

Query: 144 PPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           PPCH  +QF+V  +G LSC L+QRS D+ LG  FNI   +LLT M+A   G    E + T
Sbjct: 190 PPCHMTYQFHVRSDGGLSCLLFQRSCDLGLGFAFNIFEAALLTRMVAEQCGLYAHEVVWT 249

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
            GDVHLY NH E  + QL+R P   P++ I      +  +R+EDF +  Y P A I A V
Sbjct: 250 GGDVHLYLNHAELVEQQLARVPEGKPRLRILRRPPSIFEYRFEDFVVEDYAPQAHISAPV 309

Query: 263 SV 264
           +V
Sbjct: 310 AV 311


>gi|103486818|ref|YP_616379.1| thymidylate synthase [Sphingopyxis alaskensis RB2256]
 gi|98976895|gb|ABF53046.1| thymidylate synthase [Sphingopyxis alaskensis RB2256]
          Length = 320

 Score =  242 bits (618), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/302 (44%), Positives = 177/302 (58%), Gaps = 40/302 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHELLW 61
           QYLDL+R +   G +R DRTGVGTRS FG  MRF L     PLLTTK+V+WK+ + ELLW
Sbjct: 19  QYLDLMRRIWVDGDERVDRTGVGTRSLFGETMRFSLKDDAIPLLTTKRVYWKTALRELLW 78

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-----------------------ADKD-----GELGPI 93
           FL GD+N+  L   GV IW +W                       AD D     G+LGP+
Sbjct: 79  FLTGDTNIRPLVAQGVKIWTDWPLEKYRKATGEAISATDFEARIVADADFAAKWGDLGPV 138

Query: 94  YGVQWRSWPDYD---GNVI-------DQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           YG QW +WP Y+   G +        +QI++++ SL+ +P SRRHI + WNVA +D+MAL
Sbjct: 139 YGHQWVNWPRYEPAGGGLFRRADHGYNQIAALIDSLKNNPGSRRHIFTGWNVADLDRMAL 198

Query: 144 PPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           PPCH  +QF+V  +G LSC L+QRS D+ LG  FNI   +LLT M+A   G    E + T
Sbjct: 199 PPCHMTYQFHVRSDGGLSCLLFQRSCDLGLGFAFNIFEAALLTRMVAEQCGLYAHEVVWT 258

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
            GDVHLY NH E  + QL+R P   P++ I      +  +R+EDF +  Y P A I A V
Sbjct: 259 GGDVHLYLNHAELVEQQLARVPEGKPRLRILRRPPSIFEYRFEDFVVEDYAPQAHISAPV 318

Query: 263 SV 264
           +V
Sbjct: 319 AV 320


>gi|83816568|ref|YP_444564.1| thymidylate synthase [Salinibacter ruber DSM 13855]
 gi|83757962|gb|ABC46075.1| thymidylate synthase [Salinibacter ruber DSM 13855]
          Length = 355

 Score =  241 bits (616), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 130/296 (43%), Positives = 174/296 (58%), Gaps = 34/296 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L+ ++  G+   DRTG GT   FG Q+RFDL++GFPLLTTK+V  + V  ELL
Sbjct: 62  MRQYLDYLQDILDHGTRHEDRTGTGTIRVFGRQLRFDLTEGFPLLTTKRVWMRGVTEELL 121

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFLRG++N+  L +  VSIW +W                            A++ G+LGP
Sbjct: 122 WFLRGETNIQSLVQADVSIWTDWPLQRYRDETGDEISQEAFEERIATDDAFAERWGDLGP 181

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR +   +G V DQI  +V+ LR  P+SRRH+VSAW+ A I+  ALPPCH  FQ 
Sbjct: 182 VYGTQWRDFEGPEGRV-DQIERLVRGLRETPHSRRHVVSAWHPAQIEDAALPPCHYAFQC 240

Query: 153 YVD----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           +V+    +G+LS    QRS D FLG+PFNIASY+LLT MLA   G    E I   GD H+
Sbjct: 241 FVEGEPGDGRLSLMWQQRSVDSFLGLPFNIASYALLTRMLAQQAGLTPHELIFNGGDCHI 300

Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Y NH EQ + QL+R+P   P + +      +     +D T+  YE H A+ A ++V
Sbjct: 301 YQNHVEQVEEQLTRTPYDRPTLRLR-QRDSIFEHAADDVTIEDYEHHPALTAPIAV 355


>gi|328862602|gb|EGG11703.1| hypothetical protein MELLADRAFT_51590 [Melampsora larici-populina
           98AG31]
          Length = 302

 Score =  241 bits (616), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 130/292 (44%), Positives = 172/292 (58%), Gaps = 29/292 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           HQYLDL+R VI  G  R DRTG GTRS F   Q+RF L+    PLLTTKKV  K+++HEL
Sbjct: 11  HQYLDLVRRVIDQGQHRPDRTGTGTRSLFAPPQLRFTLTDSTLPLLTTKKVFTKAIIHEL 70

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------ 101
           LWF++G ++   L   GV+IW+    K            +G+LGPIYG QWR +      
Sbjct: 71  LWFIKGSTSSLDLSSKGVNIWNGNGSKKYLESIGLDQRSEGDLGPIYGFQWRHFGARYKT 130

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY    IDQ+   ++ ++++P  RR I++AWN + + KMALPPCH   QFYV     
Sbjct: 131 FQDDYTDQGIDQLKECIEKIKSNPTDRRIILTAWNPSDLSKMALPPCHMFCQFYVTLADD 190

Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                +LSC LYQRS D+ LG+PFNIASY+LL  M++ V   +  E I  LGD HLYN+H
Sbjct: 191 QNPKPRLSCILYQRSADIGLGLPFNIASYALLVHMISQVTSTEPYELIIQLGDAHLYNDH 250

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                 QL R PR  P++ +   + D+  F YEDF +  Y+PH  I   +SV
Sbjct: 251 LGPIQTQLDRQPRPFPKIKLREQVHDIDGFVYEDFQISEYDPHPKIEMAMSV 302


>gi|227822598|ref|YP_002826570.1| thymidylate synthase [Sinorhizobium fredii NGR234]
 gi|254790247|sp|C3MEE8|TYSY_RHISN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|227341599|gb|ACP25817.1| thymidylate synthase [Sinorhizobium fredii NGR234]
          Length = 305

 Score =  241 bits (616), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 128/299 (42%), Positives = 174/299 (58%), Gaps = 36/299 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLDL+  +++ G  R DRTG GT S FG QMRF LS G  P+ TTKKV+WK+ V E+L
Sbjct: 7   YQYLDLMSELLETGDRRMDRTGEGTLSLFGKQMRFKLSDGTIPIFTTKKVYWKTSVKEML 66

Query: 61  WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92
           WFL G +N+S L R  V IW                            DE+A + G+LGP
Sbjct: 67  WFLTGQTNISSLLRENVRIWTDWPLAKYRKATGETISQEQFEDRIVASDEFASEWGDLGP 126

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W D DG   DQI++++ +L+ +P SRR +  AWNV  +D+MAL PCH  +QF
Sbjct: 127 VYGKQWRRWVDNDGQEHDQIATVISTLKTNPTSRRILFHAWNVGELDRMALHPCHMTYQF 186

Query: 153 YVD--NG-----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           +V   NG     +LS  ++QRS D+FLG PFNI   ++L  M+A  +    GE +   GD
Sbjct: 187 HVSWPNGQDGRPQLSMMVHQRSCDIFLGAPFNICQQAVLLAMIAQQVDMDRGELVWLGGD 246

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            HLY NH +QA LQLSR P+  P++ I      +  +  +DF +  Y+ H  I A V+V
Sbjct: 247 THLYLNHLDQARLQLSRKPKPFPKLEIKRRPASIDGYTIDDFEVSEYQSHERIEAPVAV 305


>gi|299779177|ref|YP_003734371.1| dTMP thymidylate synthase [Enterobacteria phage IME08]
 gi|298105906|gb|ADI55550.1| dTMP thymidylate synthase [Enterobacteria phage IME08]
          Length = 289

 Score =  241 bits (615), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 130/292 (44%), Positives = 175/292 (59%), Gaps = 33/292 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L++ +++ G +  DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL
Sbjct: 3   MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 62

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G +IWDE  +         DGELGP+YG QWR   D+ 
Sbjct: 63  WFLSGSTNVNDLRERTHGSRTEGKTIWDENYENQAISLGYSDGELGPVYGKQWR---DFG 119

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  IDQ+  IV+ ++  P  RR IVSAWN A I+KMALPPCHC +QF V NG L  Q YQ
Sbjct: 120 G--IDQVVEIVERIKKMPNDRRQIVSAWNPAEINKMALPPCHCFYQFNVRNGHLDLQWYQ 177

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ + + G+ H+Y+NH EQ    L R P+
Sbjct: 178 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 237

Query: 226 TLPQMII------------NPNIVDLLSFRY-EDFTLRSYEPHAAILAKVSV 264
            L ++ I               +  +    Y EDF L+ YE H  I AK++V
Sbjct: 238 ELCELEIRYWHKDFHEWTTEQQLAWVTGMMYPEDFVLKGYESHPTIKAKMAV 289


>gi|302852458|ref|XP_002957749.1| hypothetical protein VOLCADRAFT_68527 [Volvox carteri f.
           nagariensis]
 gi|300256925|gb|EFJ41181.1| hypothetical protein VOLCADRAFT_68527 [Volvox carteri f.
           nagariensis]
          Length = 294

 Score =  239 bits (610), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 129/288 (44%), Positives = 170/288 (59%), Gaps = 27/288 (9%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLLRHV++ G  R DRTG GT S FG Q+RFD+S   P+LTTKKV W+ V+ ELLWF+
Sbjct: 7   YLDLLRHVLECGEPREDRTGTGTLSVFGRQLRFDISDCVPVLTTKKVAWQKVIQELLWFM 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW---------P 102
           RGD++ + L R GV +WD  + +            +G++G  YG QWR +         P
Sbjct: 67  RGDTDAAILQRDGVRVWDGNSSRAFLDARGLRHLPEGDIGAGYGHQWRRFGSPYVDCKTP 126

Query: 103 DYDG---NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GK 158
              G     +DQ+  ++  LR +P SRR  +SAWN   +DKMALPPCH   QFY D  G 
Sbjct: 127 PRQGAEAGGVDQLQFVLDELRRNPSSRRIFMSAWNPCDLDKMALPPCHVSAQFYADRAGG 186

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC +YQRS DVFLG P+NI SYS+LT +LA+  G +  E I + GD H+Y NH  Q   
Sbjct: 187 LSCHMYQRSVDVFLGFPWNILSYSVLTYILAAKAGLKPKELIISTGDTHIYANHVGQVRT 246

Query: 219 QLSRSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL+R P   P++ ++P +          EDF +  Y  H  I A +SV
Sbjct: 247 QLARQPFAWPRLELSPAVAAKAFEDITLEDFRMVGYTSHPYIRADMSV 294


>gi|66392008|ref|YP_238933.1| dTMP (thymidylate) synthase [Aeromonas phage 31]
 gi|62114845|gb|AAX63693.1| td [Aeromonas phage 31]
          Length = 279

 Score =  238 bits (608), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 128/281 (45%), Positives = 172/281 (61%), Gaps = 19/281 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+  VI  G  + DRTGVGTRS FG  +RFDLSKGFP +T K++ WKSVV ELL
Sbjct: 1   MIQYKDLVEDVIANGRRKTDRTGVGTRSVFGRMLRFDLSKGFPAVTCKQLAWKSVVGELL 60

Query: 61  WFLRGDSNVSYLHR--HGV-----SIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WF+ G +NV +L R  HG      +IWD   ++         G LGP+YG QWR + +  
Sbjct: 61  WFISGSTNVDHLRRITHGPNSDKRTIWDANYEEQAINLGYSGGYLGPVYGKQWRQFGN-- 118

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            N +DQ+  ++  ++++P SRR +V AWN   ID MALPPCH  FQF V  GKLS    Q
Sbjct: 119 KNPVDQLQKVIDQIKSNPDSRRLLVVAWNPEDIDAMALPPCHFAFQFEVYEGKLSLMWSQ 178

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DV LG+PFNIASY+LL  ++A + G + GE + +  DVH+Y NH +       RSPR
Sbjct: 179 RSVDVGLGLPFNIASYALLVHIIAGICGLEVGELVFSGADVHVYENHVDDLVEIFCRSPR 238

Query: 226 TLPQMIIN--PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP++      N+ +L +   +D+ L  Y+PH  I   ++V
Sbjct: 239 PLPKLAYYDVANLAELRTMTVDDYVLTEYDPHPPIKMPMAV 279


>gi|295657856|ref|XP_002789493.1| thymidylate synthase [Paracoccidioides brasiliensis Pb01]
 gi|226283762|gb|EEH39328.1| thymidylate synthase [Paracoccidioides brasiliensis Pb01]
          Length = 360

 Score =  238 bits (608), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 135/315 (42%), Positives = 179/315 (56%), Gaps = 54/315 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-GF----------PLLTTKK 49
           HQYL+L+R ++  G +R DRTG GTRS F   Q+RF LSK GF          PLLTTK+
Sbjct: 48  HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGFSSPSSRTPILPLLTTKR 107

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG Q
Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSEAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167

Query: 98  WR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR        +  DY G  +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH  
Sbjct: 168 WRYFGAEYIDAQTDYTGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227

Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
            QFYV                 G LSCQLYQRS D+ LG+PFNIASY+LLT MLA     
Sbjct: 228 AQFYVSFPSHGGNSEGGYEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTL 249
             G  IHT+GD H+Y +H E    QL R P   P+++I        ++D   ++ E+F +
Sbjct: 288 YPGTLIHTMGDAHVYLDHIEALQEQLKREPVDFPELVIKRDDRGSGVMD--GWKEEEFEV 345

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I  K+S+
Sbjct: 346 VGYKPHKGIKMKMSI 360


>gi|161622629|ref|YP_001595355.1| dTMP thymidylate synthase [Enterobacteria phage JS98]
 gi|52139835|gb|AAU29207.1| dTMP thymidylate synthase [Enterobacteria phage JS98]
          Length = 285

 Score =  238 bits (608), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 130/290 (44%), Positives = 176/290 (60%), Gaps = 31/290 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L++ +++ G +  DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G +IWDE  +   KD     GELGP+YG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRFRTHGSLIDGKTIWDENYENQAKDLGYHSGELGPVYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQ+  I+  ++  P  RR IVSAWN A ID+MALPPCHC +QF V NG L  Q YQ
Sbjct: 118 G--VDQVVEIIDRIKKMPNDRRQIVSAWNPAEIDQMALPPCHCFYQFNVRNGHLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ + + G+ H+Y+NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 235

Query: 226 TLPQMIINPNIVDLL-----------SFRYEDFTLRSYEPHAAILAKVSV 264
            L ++ IN     +L           S +  DF L+ YE H  I AK++V
Sbjct: 236 ELCELEINLPEEFILWDTKTQLSWVDSMKPSDFVLKGYESHPTIKAKMAV 285


>gi|296222342|ref|XP_002757145.1| PREDICTED: thymidylate synthase-like isoform 2 [Callithrix jacchus]
          Length = 279

 Score =  238 bits (607), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 120/274 (43%), Positives = 160/274 (58%), Gaps = 38/274 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHF--------- 142

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
              +  + + +D               +  MALPPCH L QFYV NG+LSCQLYQRSGD+
Sbjct: 143 --GAEYRDMDSD---------------LPLMALPPCHALCQFYVVNGELSCQLYQRSGDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R PR  P++
Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 246 KILRKVEKIDDFKAEDFKVEGYNPHPTIKMEMAV 279


>gi|312262725|gb|ADQ53020.1| Td thymidylate synthetase [Aeromonas phage PX29]
          Length = 277

 Score =  238 bits (607), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 124/282 (43%), Positives = 172/282 (60%), Gaps = 23/282 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLD++++VI+ G D  DRTGVGTRS  G   R D++ GFP +TTK + WK+V  ELL
Sbjct: 1   MKYYLDIMKYVIENGEDEMDRTGVGTRSILGQVFRHDMADGFPAVTTKTLAWKAVRGELL 60

Query: 61  WFLRGDSNVSYLH--RHGV-----SIWDEWAD--------KDGELGPIYGVQWRSWPDYD 105
           WF+ G +NV  L    +GV     +IWD+  +         DG+LGP+YG QWR     D
Sbjct: 61  WFMNGFTNVEVLRAMTYGVGSSTKTIWDDNFNHQGVALGYTDGDLGPVYGKQWR-----D 115

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            N +DQ++  ++ ++ +P  RR+IV AWN A +DKMALPPCH LF+F V  G+L+   YQ
Sbjct: 116 FNGVDQLAKAIERIKTNPECRRNIVCAWNPADLDKMALPPCHVLFRFSVKRGRLNLTWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D+ LGIPFNIASY LL  M+A + G++ G       D H+Y+NHF+Q   QL R P 
Sbjct: 176 RSCDLLLGIPFNIASYGLLLEMVAHITGYKAGILTGMFDDAHIYHNHFDQVQEQLQRVPY 235

Query: 226 TLPQMIINPNIVDL---LSFRYEDFTLRSYEPHAAILAKVSV 264
            LP+++       L    +   +D  L  Y+ H+AI A ++V
Sbjct: 236 DLPKLVFKKRFTTLEEACNLSLDDIQLEDYKCHSAIKAPMAV 277


>gi|294661477|ref|YP_003579930.1| Td thymidylate synthetase [Klebsiella phage KP15]
 gi|292660638|gb|ADE34886.1| Td thymidylate synthetase [Klebsiella phage KP15]
          Length = 291

 Score =  238 bits (607), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 135/292 (46%), Positives = 178/292 (60%), Gaps = 29/292 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD+++ V+  G +  DRTGVGT   FG Q R+DL++GFP  T KK+ +K   HEL 
Sbjct: 1   MKQYLDIIKLVLDNGVESTDRTGVGTIRIFGAQARWDLNRGFPATTCKKLFFKPCKHELQ 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPD-- 103
           WFL G +NV  L R          +IWD+  +K         G LGPIYG QWRS+    
Sbjct: 61  WFLSGSTNVEELRRMTWGENSDKRTIWDDNYEKQAIDLGYDSGYLGPIYGHQWRSFGSLY 120

Query: 104 ------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
                 Y G+ +DQI+ +++ L++ P  R  IVSAWN   +D MAL PCHC FQF V NG
Sbjct: 121 GDDDSYYGGSGVDQIAKVIEQLKSTPDDRGIIVSAWNPVDLDDMALRPCHCFFQFVVING 180

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           KLS Q YQRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N  EQA 
Sbjct: 181 KLSLQWYQRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAVEQAK 240

Query: 218 --LQLSRSPRTLPQMIINPNIVDLLSFRYEDF---TLRSYEPHAAILAKVSV 264
             LQ +RSP  LP ++  P +  LL    E F   TL  Y  H ++ A+++V
Sbjct: 241 ELLQPNRSPMPLP-ILKMPKVNSLLDLDQEFFDSITLEGYHNHGSLKAEMAV 291


>gi|294011284|ref|YP_003544744.1| thymidylate synthase [Sphingobium japonicum UT26S]
 gi|292674614|dbj|BAI96132.1| thymidylate synthase [Sphingobium japonicum UT26S]
          Length = 311

 Score =  238 bits (607), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 128/302 (42%), Positives = 172/302 (56%), Gaps = 39/302 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHELL 60
            QYLDL+RH+   G +R DRTGVGTRS  G  MRF L+    PLLTTK+V+WK    E+L
Sbjct: 10  QQYLDLMRHIWLHGDERIDRTGVGTRSILGATMRFSLADDAVPLLTTKRVYWKVAAREML 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------DKD----------------GELGP 92
           WFL GD+N+  L R GV IW +W             D+D                G+LGP
Sbjct: 70  WFLTGDTNIRELVRQGVHIWTDWPLDSYRKATGEEIDRDAFEARIVEDQAFAARWGDLGP 129

Query: 93  IYGVQWRSWPDYD--GNVI--------DQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
           +YG QW +WP Y+  G+ +        +QI+ +V+++R  P SRR + + WNVA + +MA
Sbjct: 130 VYGAQWVNWPRYEEVGDGLYRRAAQGHNQIADLVEAIRTSPGSRRLLFTGWNVAEVSRMA 189

Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           LPPCH  +QF V NG+L+  L+QRS D+ LG  FNI   S++T MLA     + GE +  
Sbjct: 190 LPPCHMTYQFQVANGRLNGLLFQRSCDLGLGFAFNIFGLSMITRMLAQQCDLEAGEIVWQ 249

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
            GDVHLY NH E  + Q+ R P   P++ IN     +  +R EDF +  Y P   I A V
Sbjct: 250 GGDVHLYLNHAELVEEQIGRIPSGSPKLRINRRPSSIFDYRIEDFEVADYAPQRHIAAPV 309

Query: 263 SV 264
           +V
Sbjct: 310 AV 311


>gi|312210825|emb|CBX90911.1| similar to thymidylate synthase [Leptosphaeria maculans]
          Length = 353

 Score =  238 bits (606), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 137/307 (44%), Positives = 176/307 (57%), Gaps = 44/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGT-RSTFGYQMRFDLSKG-----------FPLLTTKK 49
           +QYL L+R ++  G  R DRTG GT  + F  QM+F LSK             PLLTTK+
Sbjct: 47  YQYLSLIREILTNGEHRPDRTGTGTYAAPFPPQMKFALSKPSSDPSQPPIPILPLLTTKR 106

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD     E+ D       ++GELGP+YG Q
Sbjct: 107 VFLRAVIGELLWFVAGSTHSKPLSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGFQ 166

Query: 98  WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  IDQI+ I+  L+  PY RR I+SAWN A I KMALPPCH  
Sbjct: 167 WRHFGAEYKGHDADYTGQGIDQIAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHMF 226

Query: 150 FQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            QFYV             G L   LYQRS D+ LG+PFNIASY+LLT MLA V     G 
Sbjct: 227 AQFYVSFPGHKQGQERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPGT 286

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYEDFTLRSYEPHAA 257
           F HT+GD H+Y +H E   LQL R PR  P++ IN  I   +  ++ +DF +  Y+PHA+
Sbjct: 287 FTHTMGDAHVYADHVEALKLQLQREPREFPELKINREIGGSIDGWKADDFEVVGYKPHAS 346

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 347 IAMKMSV 353


>gi|282174112|ref|YP_003358214.1| ORF75 [Anguillid herpesvirus 1]
 gi|281308955|gb|ADA57838.1| ORF75 [Anguillid herpesvirus 1]
          Length = 301

 Score =  238 bits (606), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 121/296 (40%), Positives = 177/296 (59%), Gaps = 35/296 (11%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTR-STFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           Y++ ++ ++  G +RRDRT VG+    FG+  R++L +GFPL TTK+V W++V  EL+WF
Sbjct: 6   YIEHVKSILTDGVERRDRTSVGSSLVKFGHMGRYNLRRGFPLFTTKRVFWRAVAEELIWF 65

Query: 63  LRGDSNVSYLHRHGVSIWDE-----WADKDG-------ELGPIYGVQWRSW--------P 102
           L+G ++   L   GV+IW +     + D  G       +LGP+YG QWR W         
Sbjct: 66  LKGCTDGVKLAEKGVNIWRDNGTRSFLDSRGLTDHREHDLGPVYGFQWRHWGASYVGADA 125

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------- 155
           +Y G   DQI SI+ +L+A   +RR ++SAWNV+ + KMALPPCH   QF++D       
Sbjct: 126 EYSGQGHDQIQSILSNLKARNNNRRLLLSAWNVSDVPKMALPPCHLFAQFHIDFPAGYQH 185

Query: 156 -------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
                    +LSC  YQRS D+ LG+PFN+ASY+LLT ++A +   + GE IH++GD H+
Sbjct: 186 GTITETIKPRLSCLFYQRSADMGLGVPFNVASYALLTHIMAHLADLEVGELIHSIGDAHI 245

Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Y NH  Q +LQ+ R  R  PQ+ INP +  L    +ED T+  Y PH  I  +++V
Sbjct: 246 YTNHVAQLELQVKREIRPPPQLTINPRVKSLEDLTFEDLTITGYNPHPTIKMEMAV 301


>gi|325095325|gb|EGC48635.1| thymidylate synthase [Ajellomyces capsulatus H88]
          Length = 369

 Score =  238 bits (606), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 136/325 (41%), Positives = 178/325 (54%), Gaps = 64/325 (19%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46
           HQYL L+R +++ G  R DRTG GTRS F   Q+RF LSK                PLLT
Sbjct: 47  HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+Y
Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166

Query: 95  GVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           G QWR        +  DY G  +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC
Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQITEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226

Query: 147 HCLFQFYVD----------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           H   QFYV                        G LSCQLYQRS D+ LG+PFNIASY+LL
Sbjct: 227 HMFAQFYVSFPAGDRDDGGEEGEEKNKTEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDL 239
           T MLA  +    G  IHT+GD H+Y +H E    QL+R P   P++II        I+D 
Sbjct: 287 THMLAHAVDLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMD- 345

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++ E+F +  Y+PH  I  K+SV
Sbjct: 346 -GWKEEEFEVVGYKPHKGIKMKMSV 369


>gi|332225955|ref|XP_003262153.1| PREDICTED: thymidylate synthase-like [Nomascus leucogenys]
          Length = 251

 Score =  238 bits (606), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 115/247 (46%), Positives = 153/247 (61%), Gaps = 20/247 (8%)

Query: 38  LSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD---------- 87
            S  FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D          
Sbjct: 5   FSDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTR 64

Query: 88  --GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             G+LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN   
Sbjct: 65  EEGDLGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRD 124

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           +  MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G
Sbjct: 125 LPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPG 184

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           +FIHTLGD H+Y NH E   +QL R PR  P++ I   +  +  F+ EDF +  Y PH  
Sbjct: 185 DFIHTLGDAHVYLNHIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPT 244

Query: 258 ILAKVSV 264
           I  +++V
Sbjct: 245 IKMEMAV 251


>gi|37651687|ref|NP_932561.1| Td [Aeromonas phage 44RR2.8t]
 gi|34732987|gb|AAQ81524.1| dTMP (thymidylate) synthase [Aeromonas phage 44RR2.8t]
          Length = 279

 Score =  238 bits (606), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 128/281 (45%), Positives = 172/281 (61%), Gaps = 19/281 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+  VI  G  + DRTGVGTRS FG  +RFDLSKGFP +T K++ WKSVV ELL
Sbjct: 1   MIQYKDLVEDVIANGRRKTDRTGVGTRSVFGRMLRFDLSKGFPAVTCKQLAWKSVVGELL 60

Query: 61  WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WF+ G +NV +L R  HG      +IWD   ++        DG LGP+YG QWR + +  
Sbjct: 61  WFISGSTNVDHLRRITHGPNSDKRTIWDANYEEQAINLGYSDGYLGPVYGKQWRQFGN-- 118

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            N +DQ+  ++  ++++P SRR +V AWN   ID MALPPCH  FQF V  GKLS    Q
Sbjct: 119 KNPVDQLQKVIDQIKSNPDSRRLLVVAWNPEDIDAMALPPCHFAFQFEVYEGKLSLMWSQ 178

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DV LG+PFNIASY+LL  ++A + G + GE + +  DVH+Y NH +       R PR
Sbjct: 179 RSVDVGLGLPFNIASYALLVHIIAGICGLEVGELVFSGADVHVYENHVDDLVEIFWRDPR 238

Query: 226 TLPQMIIN--PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP++      N+ +L +   +D+ L  Y+PH  I   ++V
Sbjct: 239 PLPKLAYYDVANLAELRTMTVDDYVLTEYDPHPPIKMPMAV 279


>gi|310722567|ref|YP_003969390.1| dTMP synthase [Aeromonas phage phiAS5]
 gi|306021410|gb|ADM79944.1| dTMP synthase [Aeromonas phage phiAS5]
          Length = 277

 Score =  237 bits (605), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/282 (43%), Positives = 171/282 (60%), Gaps = 23/282 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL++ ++  G D  DRTGVGTRS  G  ++FD++ GFP  TTK + WK+V  ELL
Sbjct: 1   MKNYQDLMQDILTHGVDEMDRTGVGTRSVVGRMIQFDMADGFPATTTKTLAWKAVRGELL 60

Query: 61  WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WF+ G +NV  L    +GV     +IWD+  +         DGELGP+YG QWR     D
Sbjct: 61  WFMNGFTNVETLRTMTYGVGSSTKTIWDDNFNNQGVALGYTDGELGPVYGKQWR-----D 115

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            N +DQ++  ++ ++ +P  RR+IVSAWN   +  MALPPCH LF+F V  G+L+   YQ
Sbjct: 116 FNGVDQLAKAIERIKTNPECRRNIVSAWNPVDLPHMALPPCHVLFRFSVKAGRLNLTWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D FLG+ FNIASY LL  ++A + G++ G     L DVH+YNNHFEQ   QLSR P 
Sbjct: 176 RSVDTFLGLAFNIASYGLLLEIVAKITGYKAGLLTGMLDDVHVYNNHFEQVREQLSREPY 235

Query: 226 TLPQMIINPNIVDL---LSFRYEDFTLRSYEPHAAILAKVSV 264
            LP+++   +   L    +   +D  L  Y+ H+AI A ++V
Sbjct: 236 ELPKLVFKKDFTTLEEACNLSVDDIQLEDYKCHSAIKAPMAV 277


>gi|326387810|ref|ZP_08209416.1| thymidylate synthase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207856|gb|EGD58667.1| thymidylate synthase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 315

 Score =  237 bits (605), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/305 (40%), Positives = 168/305 (55%), Gaps = 42/305 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDL+  +   G +R DRTGVGTRS FG  +RFDLS G  PLLTTK+++WK+   E L
Sbjct: 11  QQYLDLMARIWSHGDERIDRTGVGTRSIFGTTLRFDLSDGQVPLLTTKRIYWKTATREFL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW----------------------------ADKDGELGP 92
           WFL G++N+  L   GV IW +W                            A + GELGP
Sbjct: 71  WFLTGETNIRPLCAQGVEIWTDWPLDRYRRETGDRMTREDFSRRIVEDADFAARWGELGP 130

Query: 93  IYGVQWRSWPDYDGNV-------------IDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           +YG QW  WP Y+ +              I+Q++ +V+ LR +P  RRHIV  WNVA +D
Sbjct: 131 VYGKQWTDWPVYEADAAAGAGLFRRRERGINQVAELVEGLRRNPGGRRHIVEGWNVAELD 190

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
            MALPPCH  +QF+V +G+LS  +YQRS DV LG+PFN+   +L   MLA       GE 
Sbjct: 191 AMALPPCHKTYQFHVADGRLSGIVYQRSCDVALGLPFNLWGGALFIHMLAQQCDLLPGEL 250

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           +   GD HLY NH +  + QL+R P   P++++      +  +   DFT+  Y P   + 
Sbjct: 251 VWMGGDTHLYLNHGDLVEAQLARQPAGSPRLVLGRRPASIFDYEIGDFTVLDYHPQKHLA 310

Query: 260 AKVSV 264
           A V+V
Sbjct: 311 APVAV 315


>gi|255538724|ref|XP_002510427.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Ricinus communis]
 gi|223551128|gb|EEF52614.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Ricinus communis]
          Length = 591

 Score =  237 bits (605), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 121/280 (43%), Positives = 159/280 (56%), Gaps = 20/280 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL L   +I  G+ + DRTG GT S FG QM+++L K FPLLTTK+V W  VV ELLW
Sbjct: 306 YMYLRLAEQIISNGTLKDDRTGTGTLSKFGGQMQYNLRKSFPLLTTKRVFWMGVVEELLW 365

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+ G +N   L   G+ IWD  A +D             +LGPIYG QWR +        
Sbjct: 366 FISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKDIEESDLGPIYGFQWRYFGARYTDMH 425

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  +++ P  R  I+ +WN + +  MA PPCH   QFYV NG+LSC
Sbjct: 426 ADYSGQGFDQLVDVIDKIKSKPDDRCIILRSWNPSDLKLMAFPPCHMFAQFYVANGELSC 485

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIA Y+LLT ++A V     G+FIH +GD  +   H      QL 
Sbjct: 486 QMYQRSADIGLGVPFNIAFYALLTCIIAHVCALVPGDFIHLIGDARVCTTHIGPLQKQLQ 545

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
           + P   P + INP   D+ SF   DF L  Y+PH  I  K
Sbjct: 546 KLPTPFPILRINPAKKDIDSFEASDFQLIGYDPHEYIDMK 585


>gi|114672495|ref|XP_001150304.1| PREDICTED: thymidylate synthase isoform 2 [Pan troglodytes]
          Length = 279

 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 120/274 (43%), Positives = 159/274 (58%), Gaps = 38/274 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHF--------- 142

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
              +  + + +D               +  MALPPCH L QFYV N +LSCQLYQRSGD+
Sbjct: 143 --GAEYRDMESD---------------LPLMALPPCHALCQFYVVNSELSCQLYQRSGDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R PR  P++
Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 246 KILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 279


>gi|18150851|dbj|BAB83677.1| thymidylate synthase [Homo sapiens]
 gi|119622121|gb|EAX01716.1| thymidylate synthetase, isoform CRA_a [Homo sapiens]
          Length = 279

 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 120/274 (43%), Positives = 160/274 (58%), Gaps = 38/274 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHF--------- 142

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
              +  + + +D               +  MALPPCH L QFYV N +LSCQLYQRSGD+
Sbjct: 143 --GAEYRDMESD---------------LPLMALPPCHALCQFYVVNSELSCQLYQRSGDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R PR  P++
Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 246 RILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 279


>gi|169784213|ref|XP_001826568.1| thymidylate synthase [Aspergillus oryzae RIB40]
 gi|238508715|ref|XP_002385543.1| thymidylate synthase [Aspergillus flavus NRRL3357]
 gi|83775313|dbj|BAE65435.1| unnamed protein product [Aspergillus oryzae]
 gi|220688435|gb|EED44788.1| thymidylate synthase [Aspergillus flavus NRRL3357]
          Length = 333

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/307 (44%), Positives = 176/307 (57%), Gaps = 46/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 29  HQYLNLIRTILASGEYRPDRTGTGTRSIFAPPQLRFSLSKPAPNPADDPIPVLPLLTTKR 88

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97
           V  ++VV ELLWF+ G ++   L   GV IWD     E+ DK G       +LGP+YG Q
Sbjct: 89  VFLRAVVAELLWFISGCTSSLPLSDQGVKIWDGNGSREFLDKVGLDHREVGDLGPVYGFQ 148

Query: 98  WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ +V  L+ +P+ RR I+SAWN A + KMALPPCH  
Sbjct: 149 WRHFGAEYVDAKTDYTGQGVDQLAEVVHKLKNNPFDRRIIMSAWNPADLKKMALPPCHMF 208

Query: 150 FQFYVD-------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
            QFYV         G L CQLYQRS DV LG+PFNIASY+LLT M+A  +    G F+H 
Sbjct: 209 AQFYVSYPNGQDQKGHLHCQLYQRSCDVALGVPFNIASYALLTHMIAHAVDLHPGTFVHA 268

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMII-----NPNIVDLLSFRYEDFTLRSYEPHAA 257
           +GD H+Y +H E    QL R P   P++ I        +VD   ++ EDF +  Y PH A
Sbjct: 269 MGDTHVYLDHVEPLQEQLVREPTEFPELKIRRDDRGSGVVD--GWKPEDFEVVGYNPHKA 326

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 327 IKMKMSV 333


>gi|302926083|ref|XP_003054223.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735164|gb|EEU48510.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 326

 Score =  235 bits (600), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/302 (41%), Positives = 173/302 (57%), Gaps = 39/302 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56
           HQYLDL++ +++ G  R DRTG GT S F  + ++F L+       PLLTTK+V  ++V+
Sbjct: 25  HQYLDLVKEILETGERRPDRTGTGTYSIFAPRPLKFALNNNGTPILPLLTTKRVFTRAVI 84

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101
            ELLWF+ G+++ + L   G+ IWD    ++            G+LGP+YG QWR +   
Sbjct: 85  AELLWFVEGNTSSTSLSEAGIKIWDGNGSREFLDNLGLNHREVGDLGPVYGFQWRHFGAE 144

Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQ++ I+  LR +PY RR I+SAWN A + KM LPPCH   QFYV  
Sbjct: 145 YVDAKTDYTGQGVDQLAEIIHKLRTNPYDRRLILSAWNPADLKKMVLPPCHMFAQFYVSY 204

Query: 156 ------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
                        G L CQLYQRS D+ LG+PFNIASY+LLT M+A V     G   H +
Sbjct: 205 PRRKDGDPETKPQGHLHCQLYQRSCDMGLGVPFNIASYALLTHMMAHVCELVPGSLTHVM 264

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
           GD H+Y +H E  + QL R PR  P++ I       +  ++ EDF ++ Y+PH  I  K+
Sbjct: 265 GDAHVYLDHVEALNTQLEREPRDFPELEITREKGGSIDGWKAEDFVIKGYDPHKTIAMKM 324

Query: 263 SV 264
           SV
Sbjct: 325 SV 326


>gi|213159274|ref|YP_002321317.1| thymidylate synthase/pyrimidine hydroxymethylase-like protein
           [Oryctes rhinoceros virus]
 gi|108515120|gb|ABF93345.1| putative thymidylate synthase [Oryctes rhinoceros virus]
 gi|202073460|gb|ACH96136.1| thymidylate synthase/pyrimidine hydroxymethylase-like protein
           [Oryctes rhinoceros virus]
          Length = 321

 Score =  235 bits (600), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 122/255 (47%), Positives = 164/255 (64%), Gaps = 25/255 (9%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
            YL L+R V+K  S   +RTG+  RS+FG+Q+RFDL  G  PLLTTK + +K+++ EL W
Sbjct: 31  NYLSLVRTVLKAPSSP-NRTGIDARSSFGHQLRFDLRNGVLPLLTTKPMPFKTILRELFW 89

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADKDG--------ELGPIYGVQWRSW------- 101
           FLRG++N   L R  V IW      E+ D  G         LGPIYG QWR +       
Sbjct: 90  FLRGETNQKILERQNVHIWKGNSSREYLDSRGLYDYTEYESLGPIYGFQWRHFGASYVDC 149

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGK 158
             DY    +DQ+  ++++++ DP SRR I+SAWN   +DKMALPPCH L QF+V+  NG+
Sbjct: 150 NTDYTNKGVDQLQQVIRTIKEDPTSRRIIMSAWNPVDLDKMALPPCHILVQFHVNTVNGE 209

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LS QLYQRS D+ LG+PFNIASYS+L  ++A + G + G FIH+LGDVH+Y NH   A  
Sbjct: 210 LSAQLYQRSADLMLGVPFNIASYSILVHLIAKICGLKPGYFIHSLGDVHIYENHVSGAKE 269

Query: 219 QLSRSPRTLPQMIIN 233
           QL+R P+  P + I+
Sbjct: 270 QLTREPQRQPYLNID 284


>gi|148556688|ref|YP_001264270.1| thymidylate synthase [Sphingomonas wittichii RW1]
 gi|172048261|sp|A5VCW6|TYSY_SPHWW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148501878|gb|ABQ70132.1| thymidylate synthase [Sphingomonas wittichii RW1]
          Length = 308

 Score =  235 bits (599), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 128/302 (42%), Positives = 170/302 (56%), Gaps = 39/302 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLD +      G +R DRTGVGT+S FG  MRFDLS G  PL+TTKK+ WKS + EL+
Sbjct: 7   QQYLDAMARAWYGGDERVDRTGVGTKSLFGVTMRFDLSDGTVPLITTKKIFWKSAIKELI 66

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------DKD----------------GELGP 92
           WFL GD+N+  L    V IW +W             D+D                G+LGP
Sbjct: 67  WFLSGDTNIRPLVMQNVHIWTDWPLDKYRKATGEAIDRDAFERRIVDDPAFAAEWGDLGP 126

Query: 93  IYGVQWRSWPDY----DG------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
           +YG QW  WP Y    DG        ++QI+ +V  LRA+P SRR I + WNV  +  MA
Sbjct: 127 VYGKQWVDWPRYTPAGDGLFRREEKGVNQIAELVGMLRANPSSRRLIFTGWNVPELPGMA 186

Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           LPPCH  +Q++V  G+LS  LYQRS D+ LG PFNI   ++L  MLA     + GE +  
Sbjct: 187 LPPCHMTYQYHVAGGRLSGILYQRSCDLGLGFPFNIFEAAVLIRMLAQQADLEPGELVWM 246

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
             D H+Y+NH    + QLSRSPR  P++ +     D+ S+  +DF +  Y+PH  I A+V
Sbjct: 247 GADTHVYSNHGHLVEEQLSRSPRPFPRLSLARKPADMFSYALDDFVIEGYDPHPHIKAEV 306

Query: 263 SV 264
           +V
Sbjct: 307 AV 308


>gi|115611864|ref|XP_001201855.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115615354|ref|XP_796678.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 432

 Score =  235 bits (599), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 117/256 (45%), Positives = 160/256 (62%), Gaps = 21/256 (8%)

Query: 30  FGYQMRFDLSKGFPLLTTKK-VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD- 87
           F +   F LS  FPLLTTK+ V W+ V  ELLWF++G +N + L    + IWD    KD 
Sbjct: 177 FLFTFIFSLSDQFPLLTTKRRVFWRGVAEELLWFVKGCTNATELRDKNIHIWDANGSKDF 236

Query: 88  -----------GELGPIYGVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRH 128
                      G+LGP+YG QWR         + DY G  +DQ ++++++++ +   RR 
Sbjct: 237 LEKRGLGHHKEGDLGPVYGFQWRHFGAEYKDRFTDYTGQGVDQHTNVIKTIKNNSDDRRI 296

Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
           I SAWN   + KMALPPCH   QFYV NG+LSCQLYQRSGD+ LG+PFNIASYSLLT M+
Sbjct: 297 ITSAWNPPDLPKMALPPCHAFVQFYVCNGELSCQLYQRSGDMGLGVPFNIASYSLLTYMI 356

Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFT 248
           A V G + G+F+HTLGD H+Y NH E    QL R PR  P++ I   + ++  F++EDF 
Sbjct: 357 AHVTGLKPGDFVHTLGDAHVYLNHIEPLKDQLKRVPRQFPKLNIKRKVTNIDDFKFEDFE 416

Query: 249 LRSYEPHAAILAKVSV 264
           +  Y+P+  I  +++V
Sbjct: 417 IEGYKPYPKITMQMAV 432


>gi|261192532|ref|XP_002622673.1| thymidylate synthase [Ajellomyces dermatitidis SLH14081]
 gi|239589548|gb|EEQ72191.1| thymidylate synthase [Ajellomyces dermatitidis SLH14081]
 gi|239615262|gb|EEQ92249.1| thymidylate synthase [Ajellomyces dermatitidis ER-3]
 gi|327353622|gb|EGE82479.1| thymidylate synthase [Ajellomyces dermatitidis ATCC 18188]
          Length = 363

 Score =  235 bits (599), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 134/318 (42%), Positives = 178/318 (55%), Gaps = 57/318 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46
           HQYL+L+R +++ G  R DRTG GTRS F   Q+RF LSK                PLLT
Sbjct: 48  HQYLNLIRSILEAGEYRPDRTGTGTRSLFAPPQLRFSLSKPNTSNSASTSSRTPILPLLT 107

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+Y
Sbjct: 108 TKRVFLRAVLAELLWFISGCTSSLPLSEAGIKIWDGNGSREYLDSVGLSHRPVGDLGPVY 167

Query: 95  GVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           G QWR        +  DY G  +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC
Sbjct: 168 GFQWRHFGAEYIDAQTDYAGQGVDQIAEVVRKLKDNPYDRRIILSAWNPADLKKMALPPC 227

Query: 147 HCLFQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           H   QFYV                 G LSCQLYQRS D+ LG+PFNIASY+LLT MLA  
Sbjct: 228 HMFAQFYVSFPPGDHGHDGRGEKRKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHA 287

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYED 246
                G  IHT+GD H+Y +H E    QL+R P   P++II        ++D   ++ E+
Sbjct: 288 ADLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGVMD--GWKEEE 345

Query: 247 FTLRSYEPHAAILAKVSV 264
           F +  Y+PH  I  K+SV
Sbjct: 346 FEVVGYKPHKGIKMKMSV 363


>gi|238695380|ref|YP_002922573.1| dTMP (thymidylate) synthase [Enterobacteria phage JS10]
 gi|220029516|gb|ACL78450.1| dTMP (thymidylate) synthase [Enterobacteria phage JS10]
          Length = 285

 Score =  234 bits (598), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 127/290 (43%), Positives = 176/290 (60%), Gaps = 31/290 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L++ +++ G +  DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G +IWDE  +   KD     GELGP+YG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRFRTHGSLIDGKTIWDENYENQAKDLGYHSGELGPVYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQ+  I+  ++  P  RR IVSAWN A I++MALPPCHC +QF V NG L  Q YQ
Sbjct: 118 G--VDQVVEIINRIKKMPNDRRQIVSAWNPAEINQMALPPCHCFYQFNVRNGHLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ + + G+ H+Y+NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 235

Query: 226 TLPQMIIN-----------PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L ++ I+             +  + S +  DF L+ YE H  I AK++V
Sbjct: 236 DLCELEIDLPEEFILWDTKTQLSWIDSMKPSDFVLKGYESHPTIKAKMAV 285


>gi|38640245|ref|NP_944201.1| dTMP synthase [Aeromonas phage Aeh1]
 gi|33414930|gb|AAQ17973.1| dTMP synthase [Aeromonas phage Aeh1]
          Length = 277

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/282 (43%), Positives = 166/282 (58%), Gaps = 23/282 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLD++ +  + G D  DRTGVGTRS  G   R D++ GFP +TTK + WK+V  E L
Sbjct: 1   MKAYLDIINYTFENGEDEMDRTGVGTRSVLGQVFRHDMADGFPAVTTKTLAWKAVRGECL 60

Query: 61  WFLRGDSNVSYLH--RHGV-----SIWDEWAD--------KDGELGPIYGVQWRSWPDYD 105
           WF+ G +NV  L    +GV     +IWD+  +         DGELGP+YG QWR     D
Sbjct: 61  WFMNGFTNVEVLRAMTYGVGSSSKTIWDDNFNHQGVALGYTDGELGPVYGKQWR-----D 115

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            N +DQ++  ++ ++ +P  RR+IV AWN   +DKMALPPCH LF+F V  G+L+   YQ
Sbjct: 116 FNGVDQLAKAIERIKTNPECRRNIVCAWNPVDLDKMALPPCHVLFRFSVKRGRLNLTWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D FLG+PFNIASY LL  ++A + G++ G     L D H+Y+NHFEQ   QL R P 
Sbjct: 176 RSVDTFLGLPFNIASYGLLLEIVAQITGYKAGILTGMLDDTHIYHNHFEQVQEQLQREPH 235

Query: 226 TLPQMIINPNIVDL---LSFRYEDFTLRSYEPHAAILAKVSV 264
            LP +        L    +   +D  L  Y+ H+AI A ++V
Sbjct: 236 KLPTLKFKNRFTTLEEACNLSVDDIELEDYKCHSAIKAPMAV 277


>gi|119486915|ref|XP_001262377.1| thymidylate synthase [Neosartorya fischeri NRRL 181]
 gi|119410534|gb|EAW20480.1| thymidylate synthase [Neosartorya fischeri NRRL 181]
          Length = 344

 Score =  233 bits (595), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/307 (43%), Positives = 178/307 (57%), Gaps = 46/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 40  HQYLNLIRTILSEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATPSSDPIPVLPLLTTKR 99

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD     E+ DK G       +LGP+YG Q
Sbjct: 100 VFLRAVIAELLWFISGCTSSIPLSEAGIKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 159

Query: 98  WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ +V+ L+  P+ RR I+SAWN A + KMALPPCH  
Sbjct: 160 WRHFGAEYIDAKTDYTGQGVDQLAEVVRKLKETPFDRRIIMSAWNPADLKKMALPPCHMF 219

Query: 150 FQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
            QFYV       + G LSC LYQRS D+ LG+PFNIASY+LLT +LA V     G  IHT
Sbjct: 220 AQFYVSYPNGLDNKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHVTDLNPGTLIHT 279

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTLRSYEPHAA 257
           +GD H+Y +H +  + QL R P   P++ I        +VD   ++ E+F +  Y+PH A
Sbjct: 280 MGDAHVYLDHVDALNEQLKREPTEFPELRIKRDDRGSGVVD--GWKEEEFEVVGYQPHKA 337

Query: 258 ILAKVSV 264
           I   +SV
Sbjct: 338 IKMNMSV 344


>gi|70982167|ref|XP_746612.1| thymidylate synthase [Aspergillus fumigatus Af293]
 gi|66844235|gb|EAL84574.1| thymidylate synthase [Aspergillus fumigatus Af293]
 gi|159122153|gb|EDP47275.1| thymidylate synthase [Aspergillus fumigatus A1163]
          Length = 344

 Score =  233 bits (595), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/307 (43%), Positives = 178/307 (57%), Gaps = 46/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 40  HQYLNLIRTILAEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATPSSDPIPILPLLTTKR 99

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD     E+ DK G       +LGP+YG Q
Sbjct: 100 VFLRAVIAELLWFISGCTSSIPLSEAGIKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 159

Query: 98  WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ +V+ L+  P+ RR I+SAWN A + KMALPPCH  
Sbjct: 160 WRHFGAEYIDAKTDYTGQGVDQLAEVVRKLKETPFDRRIIMSAWNPADLKKMALPPCHMF 219

Query: 150 FQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
            QFYV       + G LSC LYQRS D+ LG+PFNIASY+LLT +LA       G  IHT
Sbjct: 220 AQFYVSYPNGLDNKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHATDLNPGTLIHT 279

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN-----IVDLLSFRYEDFTLRSYEPHAA 257
           +GD H+Y +H +  + QL R P   P++ I  N     +VD   ++ E+F +  Y+PH A
Sbjct: 280 MGDAHVYLDHVDALNEQLKREPTEFPELRIKRNDRGSGVVD--GWKEEEFEVVGYQPHKA 337

Query: 258 ILAKVSV 264
           I   +SV
Sbjct: 338 IKMNMSV 344


>gi|46401828|ref|YP_006920.1| putative thymidylate synthase [Enterobacteria phage T5]
 gi|45775006|gb|AAS77138.1| putative thymidylate synthase [Enterobacteria phage T5]
 gi|51512030|gb|AAU05229.1| thymidylate synthase [Enterobacteria phage T5]
 gi|59897229|gb|AAX12024.1| thymidylate synthase [Enterobacteria phage T5]
          Length = 279

 Score =  233 bits (595), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/284 (46%), Positives = 168/284 (59%), Gaps = 27/284 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL +L  VI  G  R DRTG GT S F    +FDL +GFP +TTK++ WKSVV ELL
Sbjct: 1   MQQYLKILTDVILLGEPRNDRTGTGTVSIFDSYAKFDLREGFPAVTTKRLAWKSVVGELL 60

Query: 61  WFLRGDSNVSYLH----RHGVSIWDEWADK-----------DGELGPIYGVQWRSWPDYD 105
           WFL G +N+  L           W  W               G LGP+YG QWR   ++ 
Sbjct: 61  WFLSGSTNLHDLRVFTFGRDEGQWTIWTPNYEDQAISMGYDKGNLGPVYGKQWR---NFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLY 164
           G   DQI  +++ L+ +P+ RRH+VSAWNVA +DKMALPPCH  FQ YV N G L  +  
Sbjct: 118 GR--DQILELIEGLKNNPHGRRHLVSAWNVAELDKMALPPCHYGFQCYVSNDGYLDLKWT 175

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS D FLG+PFNIASY+LLT +LA + G +    I + GD H+YN+H EQ + Q+ R P
Sbjct: 176 QRSVDCFLGLPFNIASYALLTHILAKLTGLKPRYLIFSGGDTHIYNDHMEQVEEQVKRKP 235

Query: 225 RTLPQMIINPNIVDLLSFRYED-----FTLRSYEPHAAILAKVS 263
           R LP +++ P  VDL      +     F L  Y+PH A+ AK+S
Sbjct: 236 RPLPTLVM-PEFVDLYDLLENNTAAWSFHLEGYDPHPALKAKMS 278


>gi|302415413|ref|XP_003005538.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Verticillium albo-atrum VaMs.102]
 gi|261354954|gb|EEY17382.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Verticillium albo-atrum VaMs.102]
          Length = 326

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/307 (41%), Positives = 175/307 (57%), Gaps = 44/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG----FPLLTTKKVHWKSVV 56
           HQYLDL+R+++  G  R DRTG GT S F    ++F L++      PLLTTK+V  ++VV
Sbjct: 20  HQYLDLVRNILDNGEHRPDRTGTGTYSIFAPTPLKFSLNQNGEPLLPLLTTKRVFLRAVV 79

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--- 101
            ELLWF++G ++   L   G+ IWD     E+ D       ++G+LGP+YG QWR +   
Sbjct: 80  AELLWFVQGSTSSIPLSEAGIKIWDGNGSREFLDSVGLSHREEGDLGPVYGFQWRHFGAE 139

Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQ++ IV  L+ +PY RR I+SAWN A + KMALPPCH   QFYV  
Sbjct: 140 YVDAKTDYTGQGVDQLAEIVHKLKTNPYDRRIILSAWNPAHLKKMALPPCHMFAQFYVSY 199

Query: 156 -----------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
                             G L CQLYQRS D+ LG+PFNIASY+LLT M+A       G 
Sbjct: 200 PRAKRGNAAVVDAEEKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIARACDLVPGS 259

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAA 257
             H +GD H+Y +H +  + QL R PR  P + +      D+  ++ EDF ++ Y+PH  
Sbjct: 260 LTHVMGDAHVYLDHVDALETQLEREPRAFPLLEMTREAGCDIDGWKAEDFVVKGYDPHKT 319

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 320 IAMKMSV 326


>gi|225556281|gb|EEH04570.1| thymidylate synthase [Ajellomyces capsulatus G186AR]
          Length = 369

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/325 (41%), Positives = 177/325 (54%), Gaps = 64/325 (19%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46
           HQYL L+R +++ G  R DRTG GTRS F   Q+RF LSK                PLLT
Sbjct: 47  HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+Y
Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166

Query: 95  GVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           G QWR        +  DY G  +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC
Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226

Query: 147 HCLFQFYVD----------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           H   QFYV                        G LSCQLYQRS D+ LG+PFNIASY+LL
Sbjct: 227 HMFAQFYVSFPAGDRDDGGEEGEEKNEKEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDL 239
           T MLA       G  IHT+GD H+Y +H E    QL+R P   P++II        I+D 
Sbjct: 287 THMLAHAADLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMD- 345

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++ E+F +  Y+PH  I  K+SV
Sbjct: 346 -GWKEEEFEVVGYKPHKGIKMKMSV 369


>gi|315039927|ref|XP_003169341.1| thymidylate synthase [Arthroderma gypseum CBS 118893]
 gi|311346031|gb|EFR05234.1| thymidylate synthase [Arthroderma gypseum CBS 118893]
          Length = 345

 Score =  233 bits (593), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/310 (42%), Positives = 172/310 (55%), Gaps = 47/310 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 36  HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 95

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG 
Sbjct: 96  RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 155

Query: 97  QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ +V+ L+  PY RR I+SAWN A + KMALPPCH 
Sbjct: 156 QWRHFGAEYVDAKTDYAGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 215

Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             QFYV             G LSC LYQRS D+ LG+PFNIASY+LLT M A       G
Sbjct: 216 FAQFYVSFPPQKEGDERGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPG 275

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYEDFTLRSYEP 254
            FIHT+GD H+Y +H E    QL+R P   P + IN       ++  ++  DF +  Y+P
Sbjct: 276 TFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDQGSGEMDGWKDSDFEVLDYKP 335

Query: 255 HAAILAKVSV 264
           H  I  K+SV
Sbjct: 336 HKLIKMKMSV 345


>gi|189210649|ref|XP_001941656.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187977749|gb|EDU44375.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 345

 Score =  233 bits (593), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/308 (43%), Positives = 177/308 (57%), Gaps = 45/308 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRS-TFGYQMRFDLSKG------------FPLLTTK 48
           HQYL L+R++++ G  R DRTG GT +  F  QM+F LS+              PLLTTK
Sbjct: 38  HQYLSLIRNILENGEHRPDRTGTGTYALPFPPQMKFALSQPSSDPTRQDPDLILPLLTTK 97

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD     E+ D       ++GELGP+YG 
Sbjct: 98  RVFLRAVIGELLWFVAGSTHSKALSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGF 157

Query: 97  QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ I+  L+  PY RR I+SAWN A I KMALPPCH 
Sbjct: 158 QWRHFGAEYKGHSHDYTGEGVDQLAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHM 217

Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             QFYV             G L   LYQRS D+ LG+PFNIASY+LLT MLA V     G
Sbjct: 218 FAQFYVSFPGHKQGEERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPG 277

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYEDFTLRSYEPHA 256
            F HT+GD H+Y +H E   +Q+ R PR  P + IN  I   +  ++ E+F +  Y+PHA
Sbjct: 278 TFTHTMGDAHVYLDHVEALKVQVEREPRDFPTLKINREIGGSIDGWKAEEFEVIGYKPHA 337

Query: 257 AILAKVSV 264
           +I  K+SV
Sbjct: 338 SIAMKMSV 345


>gi|302496437|ref|XP_003010220.1| hypothetical protein ARB_03572 [Arthroderma benhamiae CBS 112371]
 gi|302655144|ref|XP_003019366.1| hypothetical protein TRV_06595 [Trichophyton verrucosum HKI 0517]
 gi|291173761|gb|EFE29580.1| hypothetical protein ARB_03572 [Arthroderma benhamiae CBS 112371]
 gi|291183083|gb|EFE38721.1| hypothetical protein TRV_06595 [Trichophyton verrucosum HKI 0517]
          Length = 351

 Score =  233 bits (593), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/312 (42%), Positives = 174/312 (55%), Gaps = 49/312 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 40  HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG 
Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159

Query: 97  QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ +V+ L+  PY RR I+SAWN A + KMALPPCH 
Sbjct: 160 QWRHFGAEYIDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219

Query: 149 LFQFYV--------DNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
             QFYV        D GK     LSC LYQRS D+ LG+PFNIASY+LLT M A      
Sbjct: 220 FAQFYVSFPPQKTGDEGKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN---IVDLLSFRYEDFTLRSY 252
            G FIHT+GD H+Y +H E    QL+R P   P + IN       ++  ++  DF +  Y
Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339

Query: 253 EPHAAILAKVSV 264
           +PH  I  K+SV
Sbjct: 340 KPHKLIKMKMSV 351


>gi|259483658|tpe|CBF79227.1| TPA: hypothetical protein similar to thymidylate synthase (Broad)
           [Aspergillus nidulans FGSC A4]
          Length = 674

 Score =  232 bits (592), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/312 (41%), Positives = 178/312 (57%), Gaps = 51/312 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F    MRF LSK             PLLTTK+
Sbjct: 365 HQYLNLIRQILAEGEHRPDRTGTGTRSIFAPNPMRFSLSKPSPTNPSTKIPILPLLTTKR 424

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD     E+ DK G       +LGP+YG Q
Sbjct: 425 VFLRAVLAELLWFISGSTSSIPLSEAGIKIWDGNGSREFLDKVGLSHREVGDLGPVYGFQ 484

Query: 98  WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ IV+ ++  P+ RR I+SAWN A + KMALPPCH  
Sbjct: 485 WRHFGAEYVDAHTDYTGQGVDQLADIVRKIKETPFDRRIIMSAWNPADLKKMALPPCHMF 544

Query: 150 FQFYVD------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
            Q+YV              G+LSC LYQRS D+ LG+PFNIASY+LLT ++A       G
Sbjct: 545 AQYYVSYPEGIEDGKGKGKGELSCLLYQRSCDMGLGVPFNIASYALLTHIIAHATDLNPG 604

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTLRSY 252
           + IHT+GD H+Y +H E  + QL+R P   P++ I        ++D   ++ E+F +  Y
Sbjct: 605 KLIHTMGDAHVYLDHVEALEEQLTREPTDFPELKIKREDRGSGVID--GWKEEEFEVIGY 662

Query: 253 EPHAAILAKVSV 264
            PH AI  K+SV
Sbjct: 663 APHKAIKMKMSV 674


>gi|225681301|gb|EEH19585.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Paracoccidioides brasiliensis Pb03]
          Length = 360

 Score =  232 bits (592), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/315 (42%), Positives = 178/315 (56%), Gaps = 54/315 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G +R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 48  HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGSSSPSSRTPILPLLTTKR 107

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L + G+ IWD    ++            G+LGP+YG Q
Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSKAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167

Query: 98  WR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR        +  DY G  +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH  
Sbjct: 168 WRHFGAEYIDAQTDYTGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227

Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
            QFYV                 G LSCQLYQRS D+ LG+PFNIASY+LLT MLA     
Sbjct: 228 AQFYVSFPSHGGNTESGHEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTL 249
             G  IHT+GD H+Y +H E    QL R P   P+++I        ++D   ++ E+F +
Sbjct: 288 YPGTLIHTMGDAHVYLDHIESLQEQLKREPVDFPELVIKRDDRGSGVMD--GWKEEEFEV 345

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I  K+SV
Sbjct: 346 VGYKPHKGIKMKMSV 360


>gi|67541729|ref|XP_664632.1| hypothetical protein AN7028.2 [Aspergillus nidulans FGSC A4]
 gi|40742484|gb|EAA61674.1| hypothetical protein AN7028.2 [Aspergillus nidulans FGSC A4]
          Length = 654

 Score =  232 bits (592), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/312 (41%), Positives = 178/312 (57%), Gaps = 51/312 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F    MRF LSK             PLLTTK+
Sbjct: 345 HQYLNLIRQILAEGEHRPDRTGTGTRSIFAPNPMRFSLSKPSPTNPSTKIPILPLLTTKR 404

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD     E+ DK G       +LGP+YG Q
Sbjct: 405 VFLRAVLAELLWFISGSTSSIPLSEAGIKIWDGNGSREFLDKVGLSHREVGDLGPVYGFQ 464

Query: 98  WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ IV+ ++  P+ RR I+SAWN A + KMALPPCH  
Sbjct: 465 WRHFGAEYVDAHTDYTGQGVDQLADIVRKIKETPFDRRIIMSAWNPADLKKMALPPCHMF 524

Query: 150 FQFYVD------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
            Q+YV              G+LSC LYQRS D+ LG+PFNIASY+LLT ++A       G
Sbjct: 525 AQYYVSYPEGIEDGKGKGKGELSCLLYQRSCDMGLGVPFNIASYALLTHIIAHATDLNPG 584

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTLRSY 252
           + IHT+GD H+Y +H E  + QL+R P   P++ I        ++D   ++ E+F +  Y
Sbjct: 585 KLIHTMGDAHVYLDHVEALEEQLTREPTDFPELKIKREDRGSGVID--GWKEEEFEVIGY 642

Query: 253 EPHAAILAKVSV 264
            PH AI  K+SV
Sbjct: 643 APHKAIKMKMSV 654


>gi|330919260|ref|XP_003298539.1| hypothetical protein PTT_09291 [Pyrenophora teres f. teres 0-1]
 gi|311328202|gb|EFQ93363.1| hypothetical protein PTT_09291 [Pyrenophora teres f. teres 0-1]
          Length = 345

 Score =  232 bits (592), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/308 (43%), Positives = 177/308 (57%), Gaps = 45/308 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRS-TFGYQMRFDLSKG------------FPLLTTK 48
           HQYL L+R++++ G  R DRTG GT +  F  QM+F LS+              PLLTTK
Sbjct: 38  HQYLALIRNILENGEHRPDRTGTGTYALPFPPQMKFALSRPSLDPARQDPDLILPLLTTK 97

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD     E+ D       ++GELGP+YG 
Sbjct: 98  RVFLRAVIGELLWFVAGSTHSKALSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGF 157

Query: 97  QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ I+  L+  PY RR I+SAWN A I KMALPPCH 
Sbjct: 158 QWRHFGAEYKGHSHDYTGEGVDQLAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHM 217

Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             QFYV             G L   LYQRS D+ LG+PFNIASY+LLT MLA V     G
Sbjct: 218 FAQFYVSFPGHKQGEERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPG 277

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYEDFTLRSYEPHA 256
            F HT+GD H+Y +H E   +Q+ R PR  P + IN  I   +  ++ E+F +  Y+PHA
Sbjct: 278 TFTHTMGDAHVYLDHVEALKVQVEREPRDFPTLKINREIGGSIDGWKAEEFEVIGYKPHA 337

Query: 257 AILAKVSV 264
           +I  K+SV
Sbjct: 338 SIAMKMSV 345


>gi|310799823|gb|EFQ34716.1| thymidylate synthase [Glomerella graminicola M1.001]
          Length = 325

 Score =  232 bits (591), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 125/304 (41%), Positives = 172/304 (56%), Gaps = 41/304 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R +++ G  R DRTG GT S F    ++F L+K      PLLTTK+V  ++V+
Sbjct: 22  YQYLDLVREILEEGEHRPDRTGTGTYSIFAPAPLKFSLNKNGKPLLPLLTTKRVFLRAVI 81

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101
            ELLWF+ G+++   L   GV IWD    ++            G+LGP+YG QWR +   
Sbjct: 82  AELLWFVEGNTSSLPLSEAGVKIWDGNGSREFLDSVGLSHREVGDLGPVYGFQWRHFGAE 141

Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQ++ ++  L+ +PY RR ++SAWN A + KMALPPCH   QFYV  
Sbjct: 142 YVDAKTDYTGQGVDQLAEVIHKLKTNPYDRRILLSAWNPADLKKMALPPCHMFAQFYVSY 201

Query: 156 -------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
                         G L CQLYQRS D+ LG+PFNIASY+LLT M+A       G   H 
Sbjct: 202 PRARSAPADGEKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIARACDLVPGSLTHV 261

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILA 260
           +GD H+Y +H +   +QL R PR  P + IN       +  +R EDF ++ Y+PH  I  
Sbjct: 262 MGDAHVYADHVDALKVQLEREPRDFPLLEINNREAGCSIDGWRVEDFVVKGYDPHKTIAM 321

Query: 261 KVSV 264
           K+SV
Sbjct: 322 KMSV 325


>gi|327298179|ref|XP_003233783.1| thymidylate synthase [Trichophyton rubrum CBS 118892]
 gi|326463961|gb|EGD89414.1| thymidylate synthase [Trichophyton rubrum CBS 118892]
          Length = 351

 Score =  232 bits (591), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/312 (42%), Positives = 174/312 (55%), Gaps = 49/312 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 40  HQYLNLIRTIIGTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG 
Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEGGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159

Query: 97  QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ +V+ L+  PY RR I+SAWN A + KMALPPCH 
Sbjct: 160 QWRHFGAEYIDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219

Query: 149 LFQFYV--------DNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
             QFYV        D GK     LSC LYQRS D+ LG+PFNIASY+LLT M A      
Sbjct: 220 FAQFYVSFPLQKAGDEGKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN---IVDLLSFRYEDFTLRSY 252
            G FIHT+GD H+Y +H E    QL+R P   P + IN       ++  ++  DF +  Y
Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339

Query: 253 EPHAAILAKVSV 264
           +PH  I  K+SV
Sbjct: 340 KPHKLIKMKMSV 351


>gi|260889012|ref|ZP_05900275.1| thymidylate synthase [Leptotrichia hofstadii F0254]
 gi|260861072|gb|EEX75572.1| thymidylate synthase [Leptotrichia hofstadii F0254]
          Length = 289

 Score =  232 bits (591), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 127/292 (43%), Positives = 169/292 (57%), Gaps = 31/292 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++++V+  G  + +RTGV T STF Y  + DLS+G+PLLTTKK+++ S++HEL 
Sbjct: 1   MKQYLDMVKYVLDNGIKKENRTGVDTISTFAYSYKVDLSEGYPLLTTKKMYFNSMLHELF 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVI------- 109
           W+L G+ ++  L R    IWD WAD++G L   YG  WR +P      DG V        
Sbjct: 61  WYLSGEEHIKNL-RKKTKIWDAWADEEGRLETAYGRFWRRYPVPEISLDGEVFADENNPW 119

Query: 110 -----------DQISSIVQSLR---ADPY---SRRHIVSAWNVALIDKMALPPCHCLFQF 152
                      DQI  I+ +L+    +P     RR IV AWN        LPPCH  F F
Sbjct: 120 VTREKNGQLVFDQIQYIIDTLKEMKTNPNHKNGRRMIVLAWNPGNATISKLPPCHYTFAF 179

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            V   KL+C L QRSGD+ LGIPFN+A YSLLTMM+A   G++ GEF HT+ D H+Y NH
Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEAGEFAHTIIDAHIYENH 239

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL+R P  LP++ I     + L+F  ED +L  YE H  I  +V+V
Sbjct: 240 IEGLKEQLTREPLKLPKIKIADKPFNELTF--EDISLEDYESHPVIKFEVAV 289


>gi|46108362|ref|XP_381239.1| hypothetical protein FG01063.1 [Gibberella zeae PH-1]
          Length = 325

 Score =  231 bits (590), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 173/302 (57%), Gaps = 39/302 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R +++ G  R DRTG GT S F  + ++F L+       PLLTTK+V  ++V+
Sbjct: 24  NQYLDLVREILETGERRPDRTGTGTFSIFAPRPLKFALNNNGTPILPLLTTKRVFTRAVI 83

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101
            ELLWF+ G+++   L   G+ IWD    ++            G+LGP+YG QWR +   
Sbjct: 84  AELLWFIEGNTSSKSLSEAGIKIWDGNGSREFLDNLGLQHREVGDLGPVYGFQWRHFGAE 143

Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQ++ I+  LR +PY RR ++SAWN A + KM LPPCH   QFYV  
Sbjct: 144 YVDAKTDYTGQGVDQLAEIIHKLRTNPYDRRLVLSAWNPADMKKMVLPPCHMFAQFYVSY 203

Query: 156 ------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
                        G L CQLYQRS D+ LG+PFNIASY+LLT M+A V     G   H +
Sbjct: 204 PRSKDENSEEKPQGHLHCQLYQRSCDMGLGVPFNIASYALLTHMMAHVCELVPGSLTHVM 263

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
           GD H+Y +H +   +QL R PR  P++ I       +  ++ +DFT++ Y+PH  I  K+
Sbjct: 264 GDAHVYLDHVDALKVQLEREPRNFPELEIAREKGGSIDGWKADDFTVKGYDPHKTIAMKM 323

Query: 263 SV 264
           SV
Sbjct: 324 SV 325


>gi|226288197|gb|EEH43710.1| thymidylate synthase [Paracoccidioides brasiliensis Pb18]
          Length = 360

 Score =  231 bits (590), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 134/315 (42%), Positives = 178/315 (56%), Gaps = 54/315 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G +R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 48  HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGSSSPSSRTPILPLLTTKR 107

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L + G+ IWD    ++            G+LGP+YG Q
Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSKAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167

Query: 98  WR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR        +  DY G  +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH  
Sbjct: 168 WRHFGAEYIDAQTDYMGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227

Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
            QFYV                 G LSCQLYQRS D+ LG+PFNIASY+LLT MLA     
Sbjct: 228 AQFYVSFPSHGGNTESGHEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTL 249
             G  IHT+GD H+Y +H E    QL R P   P+++I        ++D   ++ E+F +
Sbjct: 288 YPGTLIHTMGDAHVYLDHIEALQEQLKREPVDFPELVIKRDDRGSGVMD--GWKEEEFEV 345

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I  K+SV
Sbjct: 346 VGYKPHKGIKMKMSV 360


>gi|32453722|ref|NP_861931.1| dTMP (thymidylate) synthase [Enterobacteria phage RB69]
 gi|32350541|gb|AAP76140.1| dTMP (thymidylate) synthase [Enterobacteria phage RB69]
          Length = 286

 Score =  231 bits (590), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 128/291 (43%), Positives = 175/291 (60%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L+  +++ G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQYLINDILENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWD---EWADKD-----GELGPIYGVQWRSWPDYD 105
           WF+ G +NV+ L          G +IWD   E   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFMSGSTNVNDLRIRTHGSLIEGKTIWDDNYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQ+   +  ++A P  RR IVSAWN A ID+MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQLVKTIDRIKALPNDRRQIVSAWNPAEIDQMALPPCHMFYQFNVRNGHLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ LT ++A +     G+ + + G+ H+Y+NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCKEVLRREPK 235

Query: 226 TLPQMIIN--------PNIVDL----LSFRYEDFTLRSYEPHAAILAKVSV 264
            L  + IN        P  + +     +  + DF L++YE H  I AK++V
Sbjct: 236 ELCSLEINWPSNFENWPTKIQMDWVTGTMTHSDFVLKNYESHPTIKAKMAV 286


>gi|170116608|ref|XP_001889494.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635496|gb|EDQ99802.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 308

 Score =  231 bits (589), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 168/295 (56%), Gaps = 32/295 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYL L+R V+  G  R DRTG GT + F    +RF L+    PLLTTK+   + +V EL
Sbjct: 14  QQYLQLIRRVLDAGDIRPDRTGTGTIAIFAPPSLRFSLADSTLPLLTTKRTFMRGIVEEL 73

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------ 101
           LWF+ G ++ + L + GV IWD    K            +G+LGP+YG QWR +      
Sbjct: 74  LWFVHGSTDSTILSKKGVKIWDGNGSKAFLEGRGLGHRREGDLGPVYGFQWRHFGAEYVD 133

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154
              DY G  +DQ+   ++ ++ +P  RR I+SAWN   I +MALPPCH L QFYV     
Sbjct: 134 CDKDYTGQGVDQLRECIKKIKENPTDRRIILSAWNPKDIPQMALPPCHMLCQFYVHLPPA 193

Query: 155 ----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  KLSC +YQRS D+ LGIPFNIASY+LLT M+A V G    E I  LGD H+Y 
Sbjct: 194 SDPTQKPKLSCLMYQRSADLGLGIPFNIASYALLTHMIAHVTGTTAHELIIQLGDAHVYR 253

Query: 211 NHFEQADLQLSRSPRTLPQMI-INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H +  + QL R PR  P++     NI D+  F Y DF +  YEPH +I  K+S+
Sbjct: 254 DHVDALEEQLKREPRPFPKLRWARDNIDDIEDFVYSDFVVEGYEPHPSIAMKMSI 308


>gi|148927741|ref|ZP_01811178.1| Thymidylate synthase [candidate division TM7 genomosp. GTL1]
 gi|147886915|gb|EDK72448.1| Thymidylate synthase [candidate division TM7 genomosp. GTL1]
          Length = 280

 Score =  231 bits (588), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 117/268 (43%), Positives = 166/268 (61%), Gaps = 11/268 (4%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL L+  ++K G  +  R   G ++ FGYQ+RFD+ +GFPLLTTKK+ +K ++HEL W
Sbjct: 6   YQYLQLMADILKDGRSKPSRGIHGLKAIFGYQIRFDMRQGFPLLTTKKMPFKILLHELFW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           F+ G S+V YLH H +  WD +  +   +LG +YGVQWR W   DG+  DQ+   ++ ++
Sbjct: 66  FISGSSSVDYLHEHKIHYWDGFLHEGSDDLGRVYGVQWRHWLRPDGSQFDQLQWAIEQIK 125

Query: 121 ADPYSRRHIVSAWNVA-LIDK---------MALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
            +P S+  IVSAWN   L DK         M LPPCH +FQF V  GKL  QLYQRS DV
Sbjct: 126 TNPNSKAIIVSAWNAGELGDKRWNPNDYGDMRLPPCHTMFQFDVTGGKLRMQLYQRSSDV 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
           FLG+PFNIA Y++L  M+A +   +  E I ++G  HLY N  E A  Q+ R P   P++
Sbjct: 186 FLGLPFNIAQYAMLLHMVAYLADLEPRELIISIGSAHLYRNQIEPAKEQVRRKPYRFPKL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAI 258
            I  ++ D+  F+ ++F+L  Y+ H  I
Sbjct: 246 TIAGDVKDIDDFKEKNFSLEGYQSHPHI 273


>gi|66391514|ref|YP_239039.1| Td thymidylate synthetase [Enterobacteria phage RB43]
 gi|62288602|gb|AAX78585.1| Td thymidylate synthetase [Enterobacteria phage RB43]
          Length = 285

 Score =  230 bits (586), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/286 (46%), Positives = 174/286 (60%), Gaps = 23/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++R V+  G +  DRTGVGT   FG Q R++L++GFP  T+K++ +K   HEL 
Sbjct: 1   MKQYLDIIRLVLANGVESTDRTGVGTIRIFGAQTRWNLAEGFPATTSKQLFFKPCKHELQ 60

Query: 61  WFLRGDSNVSYLHRH--GV-----SIWDEWADKD--------GELGPIYGVQWRSWPD-- 103
           WFL G +NV  L     G+     +IWD+  +          G LGPIYG QWRS+    
Sbjct: 61  WFLSGSTNVDELREMTWGIGSDKRTIWDDNYENQAKSLGYSHGYLGPIYGHQWRSFGGDL 120

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y  + +DQI+ IV  L+  P  R  IVSAWN   +DKMAL PCHC FQF V NGKLS Q 
Sbjct: 121 YGNHSVDQIARIVNELKTTPDDRGIIVSAWNPVDLDKMALRPCHCFFQFVVINGKLSLQW 180

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLS 221
           YQRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N  EQA   L+  
Sbjct: 181 YQRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAIEQAKELLKPE 240

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFT---LRSYEPHAAILAKVSV 264
           R P  LP + + P +  LL    E F    L+ Y  H ++ A ++V
Sbjct: 241 REPLPLPTLYM-PKVNSLLDLDQEFFDSIHLKDYNHHGSLKAAMAV 285


>gi|206590566|emb|CAQ37528.1| probable thymidylate synthase (partial sequence c terminus) protein
           [Ralstonia solanacearum MolK2]
          Length = 415

 Score =  230 bits (586), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 106/182 (58%), Positives = 132/182 (72%)

Query: 83  WADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
           WAD DGELGPIYG QWRSWP   G  IDQI+ ++  ++ +P SRR IVSAWNV  I +M 
Sbjct: 234 WADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIKRNPDSRRLIVSAWNVGDIPRMK 293

Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A   G   G+F+ T
Sbjct: 294 LPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAQQTGLDVGDFVWT 353

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
            GD HLYNNHFEQ + QL+R+P  LP++ I      +  +++EDF +  Y+ HAAI A V
Sbjct: 354 GGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIFDYQFEDFEIVGYQSHAAIKAPV 413

Query: 263 SV 264
           +V
Sbjct: 414 AV 415


>gi|169854361|ref|XP_001833855.1| thymidylate synthase [Coprinopsis cinerea okayama7#130]
 gi|116504990|gb|EAU87885.1| thymidylate synthase [Coprinopsis cinerea okayama7#130]
          Length = 319

 Score =  230 bits (586), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/295 (42%), Positives = 166/295 (56%), Gaps = 32/295 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59
           +QYL L+R V+  G  R DRTG GT + F     RF L     PLLTTK+   + ++ EL
Sbjct: 25  YQYLSLIRRVLDTGDIRPDRTGTGTIALFAPPSFRFSLLDATLPLLTTKRTFLRGIIEEL 84

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW------ 101
           LWF+ G ++   L   G+ IWD    K+            G+LGP+YG QWR +      
Sbjct: 85  LWFVHGCTDSKLLSEKGIKIWDGNGSKEFLESRGLGHRREGDLGPVYGFQWRHFGAEYVD 144

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ+   ++ ++ +P  RR I+SAWN   I +MALPPCH + QFYV     
Sbjct: 145 CDADYTGQGVDQLRECIKKIKENPTDRRIILSAWNPKDIPQMALPPCHMMCQFYVQLPPQ 204

Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  +LSC +YQRS D+ LGIPFNIASY+LLT M+A V G +  E I  LGD H+Y 
Sbjct: 205 SDPTRKPRLSCLMYQRSADLGLGIPFNIASYALLTHMIAHVTGTEAHELIIQLGDAHVYR 264

Query: 211 NHFEQADLQLSRSPRTLPQMI-INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H E  + QL R PR  P++      IVD+  F+YEDF +  Y PH  I  K+SV
Sbjct: 265 DHVEALEEQLKREPRPFPKIRWAREGIVDIEDFKYEDFVVEGYNPHGPIAMKMSV 319


>gi|121714363|ref|XP_001274792.1| thymidylate synthase [Aspergillus clavatus NRRL 1]
 gi|119402946|gb|EAW13366.1| thymidylate synthase [Aspergillus clavatus NRRL 1]
          Length = 332

 Score =  229 bits (585), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/307 (43%), Positives = 176/307 (57%), Gaps = 46/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 28  HQYLNLIRTILAEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATSTADRIPVLPLLTTKR 87

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   GV IWD     E+ DK G       +LGP+YG Q
Sbjct: 88  VFLRAVLAELLWFISGCTSSLPLSEAGVKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 147

Query: 98  WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ +V+ L+  P+ RR I+SAWN A + KMALPPCH  
Sbjct: 148 WRHFGAEYVDAKTDYAGQGVDQLAEVVRKLKDTPFDRRIIMSAWNPADLKKMALPPCHMF 207

Query: 150 FQFYVD-------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
            QFYV         G LSC LYQRS D+ LG+PFNIASY+LLT +LA       G  IHT
Sbjct: 208 AQFYVSYPDGLDRKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHATDLNPGTLIHT 267

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFRYEDFTLRSYEPHAA 257
           +GD H+Y +H +  + QL R P   P++ I        +VD   ++ E+F +  Y+PH A
Sbjct: 268 MGDAHVYLDHVDALEEQLKREPTEFPELRIKRDDRGSGVVD--GWKEEEFEVIGYQPHKA 325

Query: 258 ILAKVSV 264
           I   +SV
Sbjct: 326 IKMNMSV 332


>gi|32709473|gb|AAP86755.1| thymidylate synthase [Enterobacteria phage RB3]
          Length = 286

 Score =  229 bits (585), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DLSKGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLSKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L+ Y+ H  +  K++V
Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286


>gi|32709471|gb|AAP86754.1| thymidylate synthase [Enterobacteria phage RB27]
          Length = 286

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  +V  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHVFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L+ Y+ H  +  K++V
Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286


>gi|291290454|dbj|BAI83249.1| dTMP (thymidylate) synthase [Enterobacteria phage AR1]
          Length = 286

 Score =  229 bits (583), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  +V  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L+ Y+ H  +  K++V
Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286


>gi|302689813|ref|XP_003034586.1| thymidylate synthase [Schizophyllum commune H4-8]
 gi|300108281|gb|EFI99683.1| thymidylate synthase [Schizophyllum commune H4-8]
          Length = 317

 Score =  229 bits (583), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 126/296 (42%), Positives = 168/296 (56%), Gaps = 33/296 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           HQYL+L++ V+  G  R DRTG GT + F    +RF L+    PL+TTK+   + +V EL
Sbjct: 22  HQYLELIQRVMDMGEVRADRTGTGTIALFAPPNLRFSLADSTLPLITTKRTFLRGIVEEL 81

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW------ 101
           LWF+ G ++ + L R  V+IWD    K+            G+LGP+YG QWR +      
Sbjct: 82  LWFIHGCTDSTVLSRKKVTIWDGNGSKEFLEGRGLGHRREGDLGPVYGFQWRHFGAEYKD 141

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154
              DY G  +DQ+   +  ++ +P  RR I+SAWN   I  MALPPCH L QFYV     
Sbjct: 142 ADADYTGQGVDQLRECIHKIKHNPTDRRIIMSAWNPKDIPLMALPPCHLLCQFYVHLPPA 201

Query: 155 -----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
                   KLSC +YQRS D+ LG+PFNIASY+LLT M+A V G    E I  LGD H+Y
Sbjct: 202 GAPDTQKPKLSCLMYQRSADLGLGVPFNIASYALLTHMIAHVTGTDAHELIIQLGDAHVY 261

Query: 210 NNHFEQADLQLSRSPRTLPQMI-INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +H E    QL R PR  P++     +I D+  F+YEDF +  Y PH +I  K+SV
Sbjct: 262 RDHVEALQTQLQREPRAFPKLRWGRDDIEDIEDFKYEDFVVEGYNPHPSIPMKMSV 317


>gi|9631429|ref|NP_048309.1| ORF MSV238 putative thymidylate synthase, similar to Arabidopsis
           thaliana GB:L08594 [Melanoplus sanguinipes
           entomopoxvirus]
 gi|4049782|gb|AAC97742.1| ORF MSV238 putative thymidylate synthase, similar to Arabidopsis
           thaliana GB:L08594 [Melanoplus sanguinipes
           entomopoxvirus]
          Length = 292

 Score =  228 bits (582), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 107/273 (39%), Positives = 161/273 (58%), Gaps = 21/273 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL  +  ++  G   ++RTGV T++ +G  M++ L   FPL TTK + W+ +V ELLW
Sbjct: 9   YQYLKGISEILSNGRITKNRTGVDTKTVYGLTMKYKLDDSFPLFTTKSMFWRGIVEELLW 68

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW-------- 101
           F+ G +N + L   G+ IWDE               K+G+LGP+YG QWR +        
Sbjct: 69  FISGSTNTNILKNKGIHIWDENGSLKYIKKRGFNDRKEGDLGPVYGFQWRHFGAKYIDMD 128

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LS 160
            +Y     DQ++ I+  ++  P SR  I++AWN   ++ M +PPCHC  QF+V N K L+
Sbjct: 129 TNYTNQGFDQLTHIINKIKNKPESRNIILTAWNPIDVENMVIPPCHCFVQFHVINNKYLT 188

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFN+ASYSLLT M+A +   +  EFIH +G+ H+Y NH      QL
Sbjct: 189 CQMYQRSADMGLGVPFNVASYSLLTYMIAHLTNLKPYEFIHNIGNAHIYVNHINGLKKQL 248

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            R+P   P++ I   + ++  F+++DF L  Y 
Sbjct: 249 ERTPNPFPKLKIKRQVDNIDDFKFDDFELIDYN 281


>gi|296818039|ref|XP_002849356.1| thymidylate synthase [Arthroderma otae CBS 113480]
 gi|238839809|gb|EEQ29471.1| thymidylate synthase [Arthroderma otae CBS 113480]
          Length = 349

 Score =  228 bits (582), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 130/310 (41%), Positives = 171/310 (55%), Gaps = 47/310 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 40  HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFALSKPSSDPSNPDPIPVLPLLTTK 99

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG 
Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159

Query: 97  QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ +V+ L+  PY RR I+SAWN A + KMALPPCH 
Sbjct: 160 QWRHFGAEYVDAKTDYAGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219

Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             QFYV             G LSC LYQRS D+ LG+PFNIASY+LLT M A       G
Sbjct: 220 FAQFYVSFPPQQEGDKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPG 279

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFTLRSYEP 254
             IHT+GD H+Y +H E    QL+R P   P + I   +    ++  ++  DF +  Y+P
Sbjct: 280 TLIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKIHRTDRGSGEMDGWKDSDFEVLDYKP 339

Query: 255 HAAILAKVSV 264
           H  I  K+SV
Sbjct: 340 HKLIKMKMSV 349


>gi|32709465|gb|AAP86751.1| thymidylate synthase [Enterobacteria phage LZ2]
          Length = 286

 Score =  228 bits (582), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L+ Y+ H  +  K++V
Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286


>gi|32364179|gb|AAP80238.1| dTMP thymidylate synthase [Enterobacteria phage T2]
 gi|32709475|gb|AAP86756.1| thymidylate synthase [Enterobacteria phage T2H]
 gi|113951991|gb|ABI48931.1| Td [Enterobacteria phage T2H]
          Length = 286

 Score =  228 bits (580), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 126/291 (43%), Positives = 172/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DLSKGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLSKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMIIN------------PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I+              +  +L  R +DF L +Y  H  I  K++V
Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286


>gi|320586368|gb|EFW99047.1| thymidylate synthase [Grosmannia clavigera kw1407]
          Length = 316

 Score =  228 bits (580), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 128/307 (41%), Positives = 171/307 (55%), Gaps = 44/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R ++  G  R DRTG GT S F  +  +F LS       PLLTTK+V  + V+
Sbjct: 10  YQYLDLVREILDSGERRPDRTGTGTLSIFAPRPFKFQLSDNGRLVLPLLTTKRVFHRGVI 69

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW--- 101
            ELLWF++G+++   L   G+ IWD     E+ D        +G+LGP+YG QWR +   
Sbjct: 70  AELLWFIQGNTSSLALSNAGIKIWDGNGSREFLDSVGLSHRAEGDLGPVYGFQWRHFGAE 129

Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY    +DQ++ ++  LR DPY+RR I+SAWN   +  MALPPCH   QFYV  
Sbjct: 130 YVDASTDYTSQGVDQLADVIHKLRTDPYNRRIILSAWNPKDLPSMALPPCHMFAQFYVSF 189

Query: 156 -----------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
                             G L CQLYQRS D+ LG+PFNIASY+LLT MLA V     G 
Sbjct: 190 PRQDQGQEDSSKDTQKVKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGS 249

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYEDFTLRSYEPHAA 257
           F H +GD H+Y +H E    QL R PR  PQ+ I  ++   +  ++ EDF ++ Y PH  
Sbjct: 250 FTHVMGDAHIYIDHAEALQTQLEREPREFPQLEIMRDVGGSIDGWKEEDFVIKGYTPHKP 309

Query: 258 ILAKVSV 264
           I  K+S 
Sbjct: 310 IAMKMST 316


>gi|304373617|ref|YP_003858362.1| Td thymidylate synthetase [Enterobacteria phage RB16]
 gi|299829573|gb|ADJ55366.1| Td thymidylate synthetase [Enterobacteria phage RB16]
          Length = 284

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/285 (44%), Positives = 174/285 (61%), Gaps = 22/285 (7%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++  V+  G++  DRTGVGT   FG Q R++L++GFP  T+K++ +K   HEL 
Sbjct: 1   MKQYLDIVNTVLTHGTESTDRTGVGTLRIFGMQARWNLAEGFPATTSKQLFFKPCKHELQ 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWADKD--------GELGPIYGVQWRSW-PDY 104
           WFL G +NV  L +          +IWD+  +          G LGPIYG QWRS+  + 
Sbjct: 61  WFLEGSTNVETLRKMTWGEDSDKRTIWDDNYENQAKALGYTHGYLGPIYGHQWRSFGAEG 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             + +DQI+ IV+ L+  P  R  IVSAWN   +D MAL PCHC FQF V NGKLS Q Y
Sbjct: 121 SFSGVDQIARIVKELKEKPDDRGIIVSAWNPVDLDDMALRPCHCFFQFVVINGKLSLQWY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLSR 222
           QRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N  EQA   L+  R
Sbjct: 181 QRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAVEQAKELLKPER 240

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFT---LRSYEPHAAILAKVSV 264
           +P  LP + + P +  LL    E F    L+ Y  H ++ A ++V
Sbjct: 241 APLPLPTLYM-PKVNSLLDLDQEFFDSIHLKDYNHHGSLKAAMAV 284


>gi|257125466|ref|YP_003163580.1| thymidylate synthase [Leptotrichia buccalis C-1013-b]
 gi|257049405|gb|ACV38589.1| thymidylate synthase [Leptotrichia buccalis C-1013-b]
          Length = 289

 Score =  227 bits (579), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/292 (43%), Positives = 167/292 (57%), Gaps = 31/292 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++++V+  G  + +RTGV T STF Y  + DLS+G+PLLTTKK+++ S++HEL 
Sbjct: 1   MKQYLDMVKYVLDNGVKKENRTGVDTISTFAYSYKVDLSEGYPLLTTKKMYFNSMLHELF 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVI------- 109
           W+L G+ ++  L R    IWD WAD++G L   YG  WR +P      DG V        
Sbjct: 61  WYLSGEEHIKNL-RKKTKIWDAWADEEGRLQTAYGRFWRRYPVPEISLDGEVFADEDNPW 119

Query: 110 -----------DQISSIVQSLR---ADPY---SRRHIVSAWNVALIDKMALPPCHCLFQF 152
                      DQI  I+ +L+    +P     RR IV AWN        LPPCH  F F
Sbjct: 120 VTREENGQLVFDQIQYIIDTLKEMKTNPNHKNGRRMIVLAWNPGNATISKLPPCHYTFAF 179

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            V   KL+C L QRSGD+ LGIPFN+A YSLLTMM+A   G++ GEF HT+ D H+Y NH
Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEVGEFAHTIIDAHIYENH 239

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL+R P  L ++ I     + L+F  ED  L  YE H  I  +V+V
Sbjct: 240 IEGLKEQLTREPLKLAKIKIVDKPFNELTF--EDIMLEDYESHPVIKFEVAV 289


>gi|109290183|ref|YP_656432.1| thymidylate synthetase [Aeromonas phage 25]
 gi|104345856|gb|ABF72756.1| thymidylate synthetase [Aeromonas phage 25]
          Length = 279

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/282 (44%), Positives = 168/282 (59%), Gaps = 21/282 (7%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+  +I  G  + DRTGVGTRS FG  +RFDLSKGFP  T K++ +  VV ELL
Sbjct: 1   MIQYTDLVCDIITNGRKKTDRTGVGTRSVFGRMLRFDLSKGFPATTRKRLAFVPVVGELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WF++G +NV +L +          +IWD+  +K        DG LGP+YG QWR + +  
Sbjct: 61  WFMQGSTNVEHLRKLTYGENSDRKTIWDDNYNKQAVDLGYSDGYLGPVYGKQWRMFGNK- 119

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            N +DQ+ +++  ++A+P SRR +V AWN   I+KMALPPCH  FQF V  GKLS    Q
Sbjct: 120 -NPVDQLQNVIDQIKANPDSRRLLVVAWNPEDIEKMALPPCHYAFQFEVYEGKLSLMWSQ 178

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DV LG+PFNIASY+LL  ++A +   + GE + +  DVH+Y NH       LSR  R
Sbjct: 179 RSVDVGLGLPFNIASYALLVHIVARICNLEVGELVFSGADVHIYENHLSHLGGMLSREER 238

Query: 226 TLPQMIINPNIVDLLSFRY---EDFTLRSYEPHAAILAKVSV 264
            LP +   P+I  L   R     DF L  Y+PH  I   ++V
Sbjct: 239 PLPTLSF-PDIGSLSDLRLLEAADFRLDGYDPHPTIKLPMAV 279


>gi|307293290|ref|ZP_07573136.1| thymidylate synthase [Sphingobium chlorophenolicum L-1]
 gi|306881356|gb|EFN12572.1| thymidylate synthase [Sphingobium chlorophenolicum L-1]
          Length = 296

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/296 (40%), Positives = 169/296 (57%), Gaps = 39/296 (13%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHELLWFLRGD 66
           +RH+ + G +R DRTGVGTRS  G  MRF L+    PLLTTK+V+WK    E+LWFL GD
Sbjct: 1   MRHIWRHGDERIDRTGVGTRSILGATMRFSLADDAVPLLTTKRVYWKVAAREMLWFLTGD 60

Query: 67  SNVSYLHRHGVSIWDEWA------------DKD----------------GELGPIYGVQW 98
           +N+  L R GV IW +W             D+D                G+LGP+YG QW
Sbjct: 61  TNIRELVRQGVHIWTDWPLDAYRRATGEDIDRDAFEARIVEDEAFAARWGDLGPVYGAQW 120

Query: 99  RSWPDYD--GNVI--------DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
            +WP Y+  G+ +        +QI+ +V+ +R +P SRR + + WNVA + +M+LPPCH 
Sbjct: 121 VNWPRYEAVGDGLYRKAAQGHNQIADLVEGIRNNPGSRRLLFTGWNVAEVSRMSLPPCHM 180

Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
            +QF V +G+L+  L+QRS D+ LG  FNI   S++T MLA     + GE +   GDVHL
Sbjct: 181 TYQFQVADGRLNGLLFQRSCDLGLGFAFNIFGLSMITRMLAQQCDLKPGEVVWQGGDVHL 240

Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Y NH E  + Q+ R+P   P++ IN     +  +R EDF +  Y P   I A V+V
Sbjct: 241 YLNHAELVEEQIGRNPSGAPKLRINRRPSSIFDYRIEDFEVVDYAPQRHIAAPVAV 296


>gi|258577885|ref|XP_002543124.1| thymidylate synthase [Uncinocarpus reesii 1704]
 gi|237903390|gb|EEP77791.1| thymidylate synthase [Uncinocarpus reesii 1704]
          Length = 347

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 170/311 (54%), Gaps = 48/311 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 37  HQYLNLIRSILTTGEHRPDRTGTGTRSLFAPPQLRFSLSKPGPASSSAPIPILPLLTTKR 96

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+YG Q
Sbjct: 97  VFLRAVILELLWFVSGSTSSIPLSEAGVKIWDGNGSREFLDSVGLSHRDVGDLGPVYGFQ 156

Query: 98  WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQI  +V+ L+ +PY RR I+SAWN A + KMALPPCH  
Sbjct: 157 WRHFGAEYVDAKADYTGKGVDQIVEVVRKLKENPYDRRIILSAWNPADLKKMALPPCHMF 216

Query: 150 FQFYVD-------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196
            QFYV               G L C LYQRS D+ LG+PFNIASY++LT MLA       
Sbjct: 217 AQFYVSFAPDANGETGKRQKGTLHCLLYQRSCDMGLGVPFNIASYAILTHMLAHAADLYP 276

Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFTLRSYE 253
           G   HT+GD H+Y +H E    QL+R P   P++ I   +    ++  +   DF +  Y+
Sbjct: 277 GTLTHTMGDAHVYLDHVEALQEQLTREPTAFPELKIKREDRGSGEMDGWEESDFEVIGYK 336

Query: 254 PHAAILAKVSV 264
           PH  I  K+SV
Sbjct: 337 PHKMIKMKMSV 347


>gi|262037574|ref|ZP_06011030.1| thymidylate synthase [Leptotrichia goodfellowii F0264]
 gi|261748396|gb|EEY35779.1| thymidylate synthase [Leptotrichia goodfellowii F0264]
          Length = 289

 Score =  226 bits (575), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/292 (43%), Positives = 166/292 (56%), Gaps = 31/292 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+L++HV+  G  + +RT V T STF Y  + DLSKGFPLLTTKK+++ S++HEL 
Sbjct: 1   MKEYLELVKHVLDNGVRKENRTEVDTISTFAYTYKVDLSKGFPLLTTKKMYFNSMLHELF 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVI------- 109
           W+L G+ ++  L R    IWD WAD++G L   YG  WR +P      DG V        
Sbjct: 61  WYLTGEEHIKNL-RTKTKIWDAWADEEGRLETAYGRFWRRYPVPEISLDGEVFTDENNKW 119

Query: 110 -----------DQISSIVQSLR---ADPY---SRRHIVSAWNVALIDKMALPPCHCLFQF 152
                      DQI  I+ +L+    +P     RR IV AWN        LPPCH  F F
Sbjct: 120 TKREKNGQLVFDQIQYIIDTLKEMKTNPNHKNGRRLIVLAWNPGNASISKLPPCHYTFAF 179

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            V   +L+C L QRSGD+ LGIPFN+A YSLLTMM+A   G++ GEF HT+ D H+Y NH
Sbjct: 180 NVLGNRLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEPGEFSHTIIDAHIYENH 239

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL+R P  L ++ I     + L+F  ED  L  YE H  I  +V+V
Sbjct: 240 IEGLKEQLTREPLKLSKITIADKPFNELTF--EDIKLEDYESHPVIKFEVAV 289


>gi|330858750|ref|YP_004415125.1| putative thymidylate synthase [Shigella phage Shfl2]
 gi|327397684|gb|AEA73186.1| putative thymidylate synthase [Shigella phage Shfl2]
          Length = 286

 Score =  226 bits (575), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/293 (42%), Positives = 176/293 (60%), Gaps = 36/293 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACISELL 60

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L +        G +IWDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRQRTHGSLIAGKTIWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  +V  ++  P  RR IVSAWN   + +MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIVEVVNRIKTFPNDRRQIVSAWNPVELKQMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ + + G+ H+Y+NH EQ    L+R+P 
Sbjct: 176 RSVDVFLGLPFNIASYAALLHIVADMCELVPGDLVFSGGNTHIYSNHIEQCKEILNRTPM 235

Query: 226 TLPQMIIN-PN-------------IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L ++ IN PN             + + ++ R  DF L+ Y+ H  +  K++V
Sbjct: 236 DLCKLSINWPNGFSQCDTETQMYWLTEYMTAR--DFVLKDYQSHGVLKGKMAV 286


>gi|39944952|ref|XP_362013.1| hypothetical protein MGG_04458 [Magnaporthe oryzae 70-15]
 gi|145021519|gb|EDK05648.1| hypothetical protein MGG_04458 [Magnaporthe oryzae 70-15]
          Length = 339

 Score =  226 bits (575), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/321 (39%), Positives = 173/321 (53%), Gaps = 58/321 (18%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R ++  G  R DRTG GT S F  + ++F L+K      PLLTTK+V  ++V+
Sbjct: 19  YQYLDLVREILDNGEHRPDRTGTGTYSIFAPRPLKFSLNKDGTPILPLLTTKRVFSRAVI 78

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101
            ELLWF+ G ++   L   GV IWD    ++            G+LGP+YG QWR +   
Sbjct: 79  LELLWFVSGATSAKPLSDAGVKIWDGNGSREFLDGLGLQHREVGDLGPVYGFQWRHFGAE 138

Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQ++ +V  LR +PY RR ++SAWN   +  M LPPCH   QFYV  
Sbjct: 139 YTDCHADYTGQGVDQLAEVVHKLRTNPYDRRMVLSAWNPKDLKLMVLPPCHMFAQFYVSY 198

Query: 156 --------------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
                                      G L CQLYQRS D+ LG+PFNIASY+LLT M+A
Sbjct: 199 PKAGSDSNGNGNTTEGADQTSSPSKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIA 258

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-PNIVD-----LLSFR 243
              G   G   H +GD H+Y +H +    QL R PR  P++ IN P + +     +  ++
Sbjct: 259 RATGLVPGSLTHVMGDAHVYADHVDALRTQLEREPRPFPELEINRPEVPEGGDGVIDGWK 318

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            EDF ++ Y+PH AI  K+SV
Sbjct: 319 LEDFVIKGYDPHKAIAMKMSV 339


>gi|3033367|gb|AAC12816.1| thymidylate synthase [Enterobacteria phage T4]
 gi|299780595|gb|ADJ39957.1| dTMP (thymidylate) synthase [Enterobacteria phage T4T]
          Length = 286

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMIIN------------PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I+              +  +L  R +DF L +Y  H  I  K++V
Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286


>gi|9632831|ref|NP_049848.1| dTMP (thymidylate) synthase [Enterobacteria phage T4]
 gi|136606|sp|P00471|TYSY_BPT4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157833959|pdb|1TIS|A Chain A, Crystal Structure Of Thymidylate Synthase From T4 Phage
 gi|5354455|gb|AAD42662.1|AF158101_249 dTMP (thymidylate) synthase [Enterobacteria phage T4]
 gi|215853|gb|AAA32492.1| thymidylate synthase [Enterobacteria phage T4]
          Length = 286

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGSKLRWDLTKGFPAVTTKKLAWKACIAELI 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMIIN------------PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I+              +  +L  R +DF L +Y  H  I  K++V
Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286


>gi|119179951|ref|XP_001241483.1| conserved hypothetical protein [Coccidioides immitis RS]
 gi|303321055|ref|XP_003070522.1| thymidylate synthase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110218|gb|EER28377.1| thymidylate synthase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320036037|gb|EFW17977.1| thymidylate synthase [Coccidioides posadasii str. Silveira]
          Length = 357

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 172/319 (53%), Gaps = 56/319 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GT + F   Q+RF LSK             PLLTTK+
Sbjct: 39  HQYLNLIRTILATGEHRPDRTGTGTCAIFAPPQLRFSLSKPGPTPSSTPIPILPLLTTKR 98

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+YG Q
Sbjct: 99  VFLRAVILELLWFISGCTSSLTLSEAGVKIWDGNGSREFLDSVGLSHREVGDLGPVYGFQ 158

Query: 98  WRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPCH  
Sbjct: 159 WRHFGAEYVDAKADYSGKGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPCHMF 218

Query: 150 FQFYVD---------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
            QFYV                       G L+C LYQRS D+ LG+PFNIASY+LLT ML
Sbjct: 219 AQFYVSFCNAALPEMENGTNEDADKKQKGTLNCLLYQRSCDMGLGVPFNIASYALLTHML 278

Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN---IVDLLSFRYE 245
           A       G  IHT+GD H+Y +H      QL+R P T P++ IN       D+  +   
Sbjct: 279 AHAADLYPGTLIHTMGDAHVYLDHIAALQEQLTREPTTFPELRINRTDRGSGDMDGWAEG 338

Query: 246 DFTLRSYEPHAAILAKVSV 264
           DF +  Y+PH  I  K+SV
Sbjct: 339 DFEVIGYKPHKMIKMKMSV 357


>gi|311993229|ref|YP_004010095.1| dTMP thymidylate synthase [Enterobacteria phage CC31]
 gi|284178067|gb|ADB81733.1| dTMP thymidylate synthase [Enterobacteria phage CC31]
          Length = 348

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/289 (42%), Positives = 170/289 (58%), Gaps = 34/289 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L++H+   G    DRTG GT + FG Q+RFDL +GFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQQLIQHIFDEGYVTDDRTGTGTCAVFGTQLRFDLQEGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L         +G ++WD+  +         DGELGP+YG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLRQHGSPTNGKTVWDDNYENQARSMGYVDGELGPVYGKQWR---DFM 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQ++ ++  ++  P  RR IV+AWN   I KMALPPCH ++QF V NG L  Q YQ
Sbjct: 118 G--VDQLTLVINRIKELPNDRRQIVTAWNPLDIPKMALPPCHMIYQFNVRNGLLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A + G + G  + T G+ H+Y+NH EQ +  L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALIHIVAKMTGLKPGHLVFTGGNTHIYSNHIEQCEEILRREPK 235

Query: 226 TLPQMIINPNI-------------VDLLSFRYEDFTLRSYEPHAAILAK 261
            L  + I+  I             ++  +   EDF L +YE H  I  K
Sbjct: 236 ELCNLEIDFPIEFERWQTSSQLKWINRFAV-IEDFKLVNYESHPTIKGK 283


>gi|116204425|ref|XP_001228023.1| hypothetical protein CHGG_10096 [Chaetomium globosum CBS 148.51]
 gi|88176224|gb|EAQ83692.1| hypothetical protein CHGG_10096 [Chaetomium globosum CBS 148.51]
          Length = 348

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 175/325 (53%), Gaps = 62/325 (19%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R ++  G  R DRTG GT S F  + ++F L++      PLLTTK+V  K+V+
Sbjct: 24  YQYLDLVREILDEGELRSDRTGTGTYSIFAPRPLKFSLNRDGVPILPLLTTKRVFTKAVI 83

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWR----- 99
            ELLWF+ GD++   L   GV IWD     E+ DK       +G+LGP+YG QWR     
Sbjct: 84  AELLWFISGDTSSHTLSSQGVKIWDGNGSREFLDKLGLTSRAEGDLGPVYGFQWRHFGAQ 143

Query: 100 ---SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154
              S  DY G  +DQ++ IV +LR +P+ RR ++SAWN A +  M LPPCH   QFYV  
Sbjct: 144 YVDSATDYTGKGVDQLARIVHTLRTNPFDRRLVLSAWNPADMPSMVLPPCHMFAQFYVSY 203

Query: 155 ---------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
                                        G L+CQLYQRS D+ LG+PFNIASY+LLT M
Sbjct: 204 PGGARRSHTTTTTTTNPEQTPTPPPAKSKGHLNCQLYQRSCDMGLGVPFNIASYALLTHM 263

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN--------PNIVDL 239
           LA V     G   H +GD H+Y NH E    QL R PR  P++ I+             +
Sbjct: 264 LAHVCDLVPGSLTHVMGDAHVYLNHVEALQTQLEREPRPFPELEISEERQGRGPAEERSI 323

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++ EDF ++ Y PH  I  ++SV
Sbjct: 324 DGWKAEDFLIKGYNPHKIIPMEMSV 348


>gi|12230765|sp|Q9P4T7|TYSY_AGABI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|8918939|emb|CAB96042.1| thymidylate synthase [Agaricus bisporus]
          Length = 296

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/291 (43%), Positives = 164/291 (56%), Gaps = 29/291 (9%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           QYL L+R V+  G  R DRTG GT S F    +RF L +   PLLTTK+   + +V ELL
Sbjct: 6   QYLHLIRRVLDTGDLRPDRTGTGTISLFAPPNLRFSLRESTVPLLTTKRTFLRGIVEELL 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------- 101
           WF  G ++   L   GV IWD    K            +G+LGP+YG QWR +       
Sbjct: 66  WFTNGLTDSKILSDKGVKIWDGNGSKAFLESRGLGHRREGDLGPVYGFQWRHFGAEYEDC 125

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DN 156
             DY G  +DQ+   ++ ++ +P  RR I+SAWN   I  MALPPCH L QFYV    D 
Sbjct: 126 DADYAGKGVDQLRECIRKIKENPTDRRIILSAWNPKDIPSMALPPCHMLCQFYVHLPADT 185

Query: 157 GK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
            K  LSC ++QRS D+ LGIPFNIASY+LLT M+A V G    E I  LGD H+Y +H E
Sbjct: 186 AKPELSCLMFQRSADLGLGIPFNIASYALLTHMIAHVTGTTARELIIQLGDAHVYRDHVE 245

Query: 215 QADLQLSRSPRTLPQMI-INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             ++QL R PR  P++      I D+  F Y DF +  Y PH +I  K+SV
Sbjct: 246 ALEVQLQREPRPFPKLRWARDGITDIEDFEYSDFVIEGYNPHPSIAMKMSV 296


>gi|228861545|ref|YP_002854566.1| thymidylate synthetase [Enterobacteria phage RB14]
 gi|32709463|gb|AAP86750.1| thymidylate synthase [Enterobacteria phage RB14]
 gi|227438561|gb|ACP30874.1| thymidylate synthetase [Enterobacteria phage RB14]
          Length = 286

 Score =  225 bits (573), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 127/291 (43%), Positives = 173/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWD---EWADKD-----GELGPIYGVQWRSWPDYD 105
           WF+ G +NV+ L          G +IWD   E   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFISGSTNVNDLRLRTHGSLIQGKTIWDDNYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQ+   +  ++  P  RR IVSAWN A I++MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQLVETIDRIKKLPTDRRQIVSAWNPAEINQMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ LT ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLIFSGGNTHIYMNHTEQCKEILRREPK 235

Query: 226 TLPQMIINPNI----VDLLSFRY--------EDFTLRSYEPHAAILAKVSV 264
            L ++ I+  I     D  +  Y        +DF L +YE H AI  K+++
Sbjct: 236 ELCELKIDWPIEFGNCDTETQLYWLTEYMKPKDFILENYESHPAIKGKMAI 286


>gi|212531339|ref|XP_002145826.1| thymidylate synthase [Penicillium marneffei ATCC 18224]
 gi|210071190|gb|EEA25279.1| thymidylate synthase [Penicillium marneffei ATCC 18224]
          Length = 311

 Score =  225 bits (573), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 122/304 (40%), Positives = 168/304 (55%), Gaps = 41/304 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-----YQMRFDLSKGFPLLTTKKVHWKSVV 56
           +QYLDL+R ++  G  R DRTG GT S F      +Q+  +     PLLTTK+V  ++V+
Sbjct: 8   NQYLDLIREILDHGERRPDRTGTGTLSIFAPRPFKFQLNDNGRPILPLLTTKRVFLRAVI 67

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101
            ELLWF+ G+++   L+  GV IWD    ++            G+LGP+YG QWR +   
Sbjct: 68  AELLWFIEGNTSSIALNEVGVKIWDGNGSREFLDNLGLTHREVGDLGPVYGFQWRHFGAE 127

Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQI+ I+  LR +PY RR I++AWN   +  M LPPCH   QFYV  
Sbjct: 128 YKDAKADYTGEGVDQIADIIHKLRNNPYDRRMILTAWNPKDLKLMVLPPCHMFAQFYVSF 187

Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
                          G L CQLYQRS D+ LG+PFNIASY+LLT MLA V     G   H
Sbjct: 188 PGQGLAETTSENKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGSLTH 247

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILA 260
            +GD H+Y +H +   +QL R PR  P++ I       +  ++ E+F ++ Y+PH AI  
Sbjct: 248 VMGDAHVYLDHVDALKVQLEREPRPFPELEITREKGASIDGWKAEEFVVKGYDPHKAIAM 307

Query: 261 KVSV 264
            +SV
Sbjct: 308 NMSV 311


>gi|257079026|ref|ZP_05573387.1| thymidylate synthase [Enterococcus faecalis JH1]
 gi|256987056|gb|EEU74358.1| thymidylate synthase [Enterococcus faecalis JH1]
          Length = 234

 Score =  224 bits (572), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%)

Query: 82  EWADKDGELGPIYGVQWRSWPDYDGN--VIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           E+A+K GELG IYG QWR W   DGN   IDQ++++++ ++ +P SRR IVSAWN   + 
Sbjct: 50  EFAEKYGELGNIYGAQWRHWETKDGNGSFIDQLANVIEMIKTNPDSRRLIVSAWNPEDVP 109

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
            MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G   GEF
Sbjct: 110 SMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETGLAVGEF 169

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           +HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+PH  I 
Sbjct: 170 VHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYDPHPTIK 229

Query: 260 AKVSV 264
           A ++V
Sbjct: 230 APIAV 234


>gi|308814595|ref|YP_003934869.1| thymidylate synthase [Shigella phage SP18]
 gi|308206187|gb|ADO19586.1| thymidylate synthase [Shigella phage SP18]
          Length = 286

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 168/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL++ V   G    DRTG GT +TFG ++ +D+S+GFP  T K++ +KSVV ELL
Sbjct: 1   MKNYQDLIQTVFDIGYQTDDRTGTGTIATFGTKVEWDMSEGFPATTVKRLAYKSVVGELL 60

Query: 61  WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WFL G +NV  L    HG      +IWD+  +         DGELGP+YG QWR   D+ 
Sbjct: 61  WFLEGSTNVERLREITHGAGSDKKTIWDQNFEAQGRALGYVDGELGPVYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQ+   ++ ++  P  RR IVSAWN A + +MALPPCH L+QF V +G+L    YQ
Sbjct: 118 G--VDQLVETIEKVKKVPTDRRQIVSAWNPAELKQMALPPCHLLYQFNVHDGELDLLWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PF+I SY  L  ++A + G + G+ +   G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFDIGSYGTLLHIVAKMTGLKPGKLVFMGGNTHIYLNHIEQCKEVLRREPK 235

Query: 226 TLPQMIIN-PNIVDLLSFRYE-----------DFTLRSYEPHAAILAKVSV 264
           TLP + IN P    L     +           DF L +YEPH  I A ++V
Sbjct: 236 TLPTLKINWPEQFHLWDTEMQLYWVTRHMSPADFVLENYEPHPTIAAPMAV 286


>gi|156049499|ref|XP_001590716.1| hypothetical protein SS1G_08456 [Sclerotinia sclerotiorum 1980]
 gi|154692855|gb|EDN92593.1| hypothetical protein SS1G_08456 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 354

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 174/314 (55%), Gaps = 53/314 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG-----FPLLTTKKVHWKSV 55
           +QYLDL+R +++ G  R DRTG GT S F    ++F L+        PLLTTK+V  ++V
Sbjct: 43  YQYLDLIREILETGEHRPDRTGTGTISLFAPAPLKFSLTSPTGTPILPLLTTKRVFLRAV 102

Query: 56  VHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR---- 99
           + ELLWF+ G ++   L   G+ IWD    +            +G+LGP+YG QWR    
Sbjct: 103 LTELLWFISGSTSSLPLSAAGIKIWDGNGSRTYLDSIGLSHRAEGDLGPVYGFQWRHFGA 162

Query: 100 ----SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD 155
               +  DY G  +DQ++ IV  L+ +P+ RR I+SAWNVA I  MALPPCH   QFYV 
Sbjct: 163 KYIDAETDYTGQGVDQLAEIVWKLKNNPWDRRIILSAWNVADIKLMALPPCHMFAQFYVS 222

Query: 156 --------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
                                G L CQLYQRS D+ LG+PFNIASY+LLT +LA      
Sbjct: 223 FPKTPDSSTSEANTNPESKPKGILHCQLYQRSCDMGLGVPFNIASYALLTHILAHACNLT 282

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII-----NPNIVDLLSFRYEDFTLR 250
            G F HT+GD H+Y +H +   +QL R PR  P++ I        +VD   ++ E+F +R
Sbjct: 283 PGTFTHTMGDAHVYVDHVDALKIQLEREPREFPELGILREDRGSGVVD--GWKGEEFEVR 340

Query: 251 SYEPHAAILAKVSV 264
            Y+PH  I  K+SV
Sbjct: 341 GYKPHGKIDMKMSV 354


>gi|326475782|gb|EGD99791.1| thymidylate synthase [Trichophyton tonsurans CBS 112818]
          Length = 351

 Score =  223 bits (569), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/312 (42%), Positives = 174/312 (55%), Gaps = 49/312 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK------------GFPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 40  HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPLLPLLTTK 99

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG 
Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159

Query: 97  QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ +V+ L+  PY RR I+SAWN A + KMALPPCH 
Sbjct: 160 QWRHFGAEYVDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219

Query: 149 LFQFYV--------DNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
             QFYV        D GK     LSC LYQRS D+ LG+PFNIASY+LLT M A      
Sbjct: 220 FAQFYVSFPPQKAGDEGKKGKGILSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN---IVDLLSFRYEDFTLRSY 252
            G FIHT+GD H+Y +H E    QL+R P   P + IN       ++  ++  DF +  Y
Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339

Query: 253 EPHAAILAKVSV 264
           +PH  I  K+S+
Sbjct: 340 KPHKLIKMKMSI 351


>gi|258539604|ref|YP_003174103.1| thymidylate synthase [Lactobacillus rhamnosus Lc 705]
 gi|257151280|emb|CAR90252.1| Thymidylate synthase [Lactobacillus rhamnosus Lc 705]
          Length = 256

 Score =  223 bits (567), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 112/256 (43%), Positives = 148/256 (57%), Gaps = 50/256 (19%)

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWA---------------------------------- 84
           +LWFL GD+N+ +L +H   IWDEWA                                  
Sbjct: 1   MLWFLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHE 60

Query: 85  ----------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128
                            K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR 
Sbjct: 61  EMAKFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRL 120

Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
           IVSAWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++
Sbjct: 121 IVSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLV 180

Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFT 248
           A   G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  
Sbjct: 181 AHECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIK 240

Query: 249 LRSYEPHAAILAKVSV 264
           L +Y+P+ AI A V+V
Sbjct: 241 LLNYDPYPAIKAPVAV 256


>gi|32709477|gb|AAP86757.1| thymidylate synthase [Enterobacteria phage U5]
          Length = 286

 Score =  223 bits (567), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/291 (43%), Positives = 172/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWD---EWADKD-----GELGPIYGVQWRSWPDYD 105
           WF+ G +NV+ L          G +IWD   E   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFISGSTNVNDLRLRTHGSLIQGKTIWDDNYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQ+   +  ++  P  RR IVSAWN A I++MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQLVETIDRIKKLPTDRRQIVSAWNPAEINQMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ LT ++A +     G+ I + G+ H+Y NH  Q    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLIFSGGNTHIYMNHTAQCKEILRREPK 235

Query: 226 TLPQMIINPNI----VDLLSFRY--------EDFTLRSYEPHAAILAKVSV 264
            L ++ I+  I     D  +  Y        +DF L +YE H AI  K+++
Sbjct: 236 ELCELKIDWPIEFGNCDTETQLYWLTEYMKPKDFILENYESHPAIKGKMAI 286


>gi|242772690|ref|XP_002478088.1| thymidylate synthase [Talaromyces stipitatus ATCC 10500]
 gi|218721707|gb|EED21125.1| thymidylate synthase [Talaromyces stipitatus ATCC 10500]
          Length = 312

 Score =  222 bits (566), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/305 (40%), Positives = 168/305 (55%), Gaps = 42/305 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R +   G  R DRTG GT S F  +  +F L+       PLLTTK+V  ++V+
Sbjct: 8   NQYLDLIRDIFDHGEQRPDRTGTGTLSIFAPRPFKFKLNDNGRPILPLLTTKRVFLRAVI 67

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--- 101
            ELLWF+ G+++   L+  GV IWD    ++            G+LGP+YG QWR +   
Sbjct: 68  AELLWFIEGNTSSIALNEVGVKIWDGNGSREFLDNLGLTHREVGDLGPVYGFQWRHFGAG 127

Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQI+ I+  LR +PY RR I++AWN   +  M LPPCH   QFYV  
Sbjct: 128 YIDAKADYTGQGVDQIADIIHKLRTNPYDRRMILTAWNPKDLRLMVLPPCHMFAQFYVSF 187

Query: 156 ---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
                           G L CQLYQRS D+ LG+PFNIASY+LLT MLA       G   
Sbjct: 188 PGQGLAKNGTTENKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHACDLVPGSLT 247

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           H +GD H+Y +H +   +QL R PR  P++ I +     +  ++ EDF ++ Y+PH AI 
Sbjct: 248 HVMGDAHVYLDHVDALKVQLEREPRPFPELEITHEKGGSIDGWKAEDFVVKGYDPHKAIA 307

Query: 260 AKVSV 264
             +SV
Sbjct: 308 MNMSV 312


>gi|164659149|ref|XP_001730699.1| hypothetical protein MGL_2153 [Malassezia globosa CBS 7966]
 gi|159104596|gb|EDP43485.1| hypothetical protein MGL_2153 [Malassezia globosa CBS 7966]
          Length = 535

 Score =  222 bits (566), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 120/297 (40%), Positives = 168/297 (56%), Gaps = 34/297 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG--YQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           +QYL+L+  +I+ G  R DRTG GT + F     ++FDLS G  PLLTTK+V ++ V+ E
Sbjct: 239 YQYLNLVSSIIRHGEIRADRTGTGTIAQFAPTRTLKFDLSGGKLPLLTTKRVFFRGVLEE 298

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW----- 101
           LLWF+ G ++   L    V IWD                ++G+LGPIYG QWR +     
Sbjct: 299 LLWFIAGCTDAKRLSERDVHIWDGNGSLEFLQRRGLSHRREGDLGPIYGFQWRHFGAKYI 358

Query: 102 ---PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---- 154
               DY G  +DQ++ ++  +R +P  RR ++ AWN A +D MALPPCH L QF+V    
Sbjct: 359 DADTDYTGQGVDQLAQVIHQIRHNPADRRILLCAWNPADLDSMALPPCHILCQFFVSMPT 418

Query: 155 -------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVH 207
                     +L CQ+YQRS D+ LG+PFNIASYSLLT  +A+V   +  EF   +GD H
Sbjct: 419 TDAMSKGQRPRLKCQMYQRSCDLGLGVPFNIASYSLLTHFIAAVTDCEAAEFTLVMGDAH 478

Query: 208 LYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +Y +H      QL R+PR  P + I  N+  +   R +D  L +Y PH  I  ++SV
Sbjct: 479 VYLDHVHPLQEQLRRTPRAFPTVHIRRNVTSIDEIRPDDVQLLNYSPHGKINMQMSV 535


>gi|154317591|ref|XP_001558115.1| hypothetical protein BC1G_03147 [Botryotinia fuckeliana B05.10]
 gi|150844321|gb|EDN19514.1| hypothetical protein BC1G_03147 [Botryotinia fuckeliana B05.10]
          Length = 356

 Score =  222 bits (566), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/318 (40%), Positives = 174/318 (54%), Gaps = 57/318 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG-----FPLLTTKKVHWKSV 55
           +QYLDL+R +++ G  R DRTG GT S F    ++F L+        PLLTTK+V  ++V
Sbjct: 41  YQYLDLIREILETGEHRPDRTGTGTISLFAPAPLKFSLTSPTGTPILPLLTTKRVFLRAV 100

Query: 56  VHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR---- 99
           + ELLWF+ G ++   L   G+ IWD    +            +G+LGP+YG QWR    
Sbjct: 101 LTELLWFISGSTSSLPLSAAGIKIWDGNGSRAYLDSIGLSHRAEGDLGPVYGFQWRHFGA 160

Query: 100 ----SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD 155
               +  DY G  +DQ++ IV  L+ +P+ RR I+SAWNVA I  MALPPCH   QFYV 
Sbjct: 161 KYIDAETDYTGQGVDQLAEIVWKLKNNPWDRRIILSAWNVADIKLMALPPCHMFAQFYVS 220

Query: 156 ------------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
                                    G L CQLYQRS D+ LG+PFNIASY+LLT +LA  
Sbjct: 221 FPKSSTASSTSEQNTNPSNPDSKPKGILHCQLYQRSCDMGLGVPFNIASYALLTHILAHA 280

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII-----NPNIVDLLSFRYED 246
                G F HT+GD H+Y +H +   +QL R PR  P++ I        +VD   ++ E+
Sbjct: 281 CDLTPGTFTHTMGDAHVYVDHVDALKVQLEREPREFPELGILREDQGSGVVD--GWKPEE 338

Query: 247 FTLRSYEPHAAILAKVSV 264
           F +R Y+PH  I  K+SV
Sbjct: 339 FEVRGYKPHGKIDMKMSV 356


>gi|328462355|gb|EGF34425.1| thymidylate synthase [Lactobacillus rhamnosus MTCC 5462]
          Length = 255

 Score =  222 bits (565), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 112/255 (43%), Positives = 148/255 (58%), Gaps = 50/255 (19%)

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84
           +WFL GD+N+ +L +H   IWDEWA                                   
Sbjct: 1   MWFLHGDTNIRFLLQHKNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEE 60

Query: 85  ----------DKD-----GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                     D D     G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR I
Sbjct: 61  MAKFDDKVLHDDDFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLI 120

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A
Sbjct: 121 VSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVA 180

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L
Sbjct: 181 HECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKL 240

Query: 250 RSYEPHAAILAKVSV 264
            +Y+P+ AI A V+V
Sbjct: 241 LNYDPYPAIKAPVAV 255


>gi|145248694|ref|XP_001400686.1| thymidylate synthase [Aspergillus niger CBS 513.88]
 gi|134081354|emb|CAK41856.1| unnamed protein product [Aspergillus niger]
          Length = 356

 Score =  222 bits (565), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 175/321 (54%), Gaps = 60/321 (18%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46
           HQYL+L+R ++  G  R DRTG GTRS F   QMRF LSK                PLLT
Sbjct: 38  HQYLNLIRRILSEGEHRPDRTGTGTRSIFAPPQMRFSLSKPSTNTTTGIKEYTPILPLLT 97

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   G+ IWD     E+ DK G       +LGP+Y
Sbjct: 98  TKRVFLRAVLAELLWFISGTTSSLPLSEAGIKIWDGNGSREYLDKVGLSHREVGDLGPVY 157

Query: 95  GVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           G QWR +         DY G  +DQ++ +V+ L+ +P+ RR I+SAWN   +  MALPPC
Sbjct: 158 GFQWRHFGAEYVDAKTDYSGQGVDQLAEVVKKLKENPFDRRIIMSAWNPKDMRIMALPPC 217

Query: 147 HCLFQFYV------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
           H   QFYV                    G L C LYQRS D+ LG+PFNIASY+LLT +L
Sbjct: 218 HMFAQFYVRFPDAKRDEEGVVRDGEWGRGHLDCLLYQRSADMGLGVPFNIASYALLTHLL 277

Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-----PNIVDLLSFR 243
           A  +    G  +HTLGD H+Y +H +    Q+ R P   P++ I        +VD   ++
Sbjct: 278 AHAVDMVPGTLVHTLGDAHVYLDHVDALKEQIEREPVAFPEVRIKREDRGSGVVD--GWK 335

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            E+F +  Y+PH AI  K+SV
Sbjct: 336 EEEFEVIGYKPHKAIKMKMSV 356


>gi|255936107|ref|XP_002559080.1| Pc13g06460 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583700|emb|CAP91715.1| Pc13g06460 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 336

 Score =  222 bits (565), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 177/315 (56%), Gaps = 54/315 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----------FPLLTTKKV 50
           HQYL+L+R ++  G  R DRTG GT+S F   Q+RF LSK            PLLTTK+V
Sbjct: 24  HQYLNLIRTILSEGEHRPDRTGTGTQSIFAPPQLRFSLSKPNPEGGEPIPILPLLTTKRV 83

Query: 51  HWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQW 98
             ++V+ ELLWF+ G ++   L   G+ IWD     E+ DK       +G+LGP+YG QW
Sbjct: 84  FLRAVLAELLWFISGCTSSLPLSEAGIKIWDGNGSREFLDKSGLGHREEGDLGPVYGFQW 143

Query: 99  RSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150
           R +         DY G  +DQ+  +V  L  +P+ RR I+SAWN A + KMALPPCH   
Sbjct: 144 RHFGAEYVDAKTDYSGQGVDQLKDVVHKLIHNPFDRRIIMSAWNPADLKKMALPPCHMFA 203

Query: 151 QFYV----------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
           QFYV                + G LSC LYQRS D+ LG+PFNIASY+LLT +LA     
Sbjct: 204 QFYVSFPPGMKLDEKTGRPSEKGTLSCVLYQRSCDMGLGVPFNIASYALLTHILAHAADL 263

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN-----IVDLLSFRYEDFTL 249
             G  IHT+GD H+Y +H +  + QL R P   P++ I  +     +VD   ++ ++F +
Sbjct: 264 HPGTLIHTMGDAHVYLDHIDALNEQLVREPTEFPELRIKRDDRGAAVVD--GWKEDEFEV 321

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I  K+SV
Sbjct: 322 IGYKPHKIIKMKMSV 336


>gi|2833319|sp|Q23695|DRTS_CRIFA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|162494|gb|AAA30318.1| dihydrofolate reductase-thymidylate synthetase [Crithidia
           fasciculata]
          Length = 515

 Score =  221 bits (562), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/283 (42%), Positives = 166/283 (58%), Gaps = 23/283 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L+  ++K G  + DRTGVGT S FG QM        PLLTTK+V W+ V  EL+WF
Sbjct: 235 QYLELIDRIMKTGLVKEDRTGVGTISLFGAQMFSLRDNQLPLLTTKRVFWRGVCEELIWF 294

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-PDYDG--- 106
           LRG++N   L    + IWD     E+ D       K+ +LGP+YG QWR +  DY G   
Sbjct: 295 LRGETNAHVLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGFDA 354

Query: 107 ---NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLSC 161
                +DQI +IV++L+ +   RR +V+AWN   + KMA+ PCH L QFYV+    +LSC
Sbjct: 355 NYDEGVDQIKTIVETLKTN--DRRLLVTAWNPCALHKMAVRPCHLLGQFYVNTQTKELSC 412

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQR  D+ LG+PFNIASY+LLT+++A   G + GE +HTLG  H+Y+NH E    QL 
Sbjct: 413 MLYQRCCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGTAHVYSNHVEALKEQLQ 472

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P ++       L  +   D  +  Y P+  I  +++V
Sbjct: 473 RVPVAFPVLVFKKEREFLEDYESTDMEVVDYVPYPPIKMEMAV 515


>gi|314121810|ref|YP_004063929.1| dTMP thymidylate synthase [Enterobacteria phage vB_EcoM-VR7]
 gi|313151567|gb|ADR32623.1| dTMP thymidylate synthase [Enterobacteria phage vB_EcoM-VR7]
          Length = 286

 Score =  221 bits (562), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 167/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL++ V   G    DRTG GT +TFG ++ +D+S+GFP  T K++ +KSVV ELL
Sbjct: 1   MKNYQDLIQTVFDIGYQTDDRTGTGTIATFGTKVEWDMSEGFPATTVKRLAYKSVVGELL 60

Query: 61  WFLRGDSNVSYLHR--HG-----VSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WFL G +NV  L    HG      +IWD+  +         DGELGP+YG QWR   D+ 
Sbjct: 61  WFLEGSTNVERLREITHGPDSDKKTIWDQNFEAQGRALGYVDGELGPVYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQ+   ++ ++  P  RR IVSAWN A + +MALPPCH L+QF V +G+L    YQ
Sbjct: 118 G--VDQLVETIEKVKKVPTDRRQIVSAWNPAELKQMALPPCHLLYQFNVHDGELDLLWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PF+I SY  L  ++A +   + G+ I   G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFDIGSYGTLLHIVAKMTRLKPGKLIFMGGNTHIYLNHIEQCKEVLRREPK 235

Query: 226 TLPQMIIN-PNIVDLLSFRYE-----------DFTLRSYEPHAAILAKVSV 264
           TLP + IN P    L     +           DF L +YEPH  I A ++V
Sbjct: 236 TLPTLKINWPEQFQLWDTEMQLYWVTRHMSPGDFVLENYEPHPTIPAPMAV 286


>gi|290563146|ref|NP_001166836.1| thymidylate synthase isoform 2 [Bombyx mori]
 gi|87248621|gb|ABD36363.1| thymidylate synthase isoform 2 [Bombyx mori]
          Length = 255

 Score =  220 bits (561), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 106/227 (46%), Positives = 140/227 (61%), Gaps = 20/227 (8%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR------ 99
           ELLW + G ++   L   GV IWD    +            +G+LGP+YG QWR      
Sbjct: 29  ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 88

Query: 100 --SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
                DY G  IDQ+ S++ S++ +P  RR ++ AWN + + KMALPPCHCL QFYV +G
Sbjct: 89  IDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFYVADG 148

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           KLSC LYQRS D+ LG+PFNIASYSLLT M+A V G+Q GEFIHT GD H+Y NH E   
Sbjct: 149 KLSCLLYQRSADMGLGVPFNIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPLK 208

Query: 218 LQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +QL R P+  P +     I  +  F+YEDF ++ Y+PH  I  +++V
Sbjct: 209 IQLQREPKQFPTLEFARKIESIDDFKYEDFIIKDYKPHPKIEMEMAV 255


>gi|327409969|ref|YP_004347389.1| dihydrofolate reductase-thymidylate synthase [Lausannevirus]
 gi|326785143|gb|AEA07277.1| dihydrofolate reductase-thymidylate synthase [Lausannevirus]
          Length = 446

 Score =  220 bits (560), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/284 (42%), Positives = 160/284 (56%), Gaps = 24/284 (8%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL LL  V+ +G +R+DRTG GT+S F   + F ++S+ FPLLT KK +W  ++ ELLWF
Sbjct: 164 YLALLSQVVNYGDERQDRTGTGTKSLFAKTLHFPNVSENFPLLTVKKTNWDKILSELLWF 223

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SWP 102
           L G ++ + L   G  IWD  A K+            G+ GPIY  QWR           
Sbjct: 224 LSGSTDATILKEKGNDIWDGNASKEFQEKVGLSHYEEGDCGPIYPFQWRHAGAKYVDCKK 283

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G   DQI  +V+ ++ DP SRR ++ +WNVA +DKM LPPCH  FQ YV   K+  Q
Sbjct: 284 DYTGEGKDQILEMVRLIQEDPTSRRILLESWNVADLDKMVLPPCHKTFQVYVRGDKIDGQ 343

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS D+ LG+PFNIASY+ L  +LA   G   G      GDVH+Y NH E A   L R
Sbjct: 344 VYQRSADLALGVPFNIASYACLLSLLAKRTGKSAGNLTLCFGDVHVYKNHMENAQKMLER 403

Query: 223 SPRTLPQMIINPNIVD--LLSFRYEDFTLRSYEPHAAILAKVSV 264
            P   P + I  NI D  L      DF L+ Y+ ++A+   ++V
Sbjct: 404 VPHRPPILEI-VNIADDTLKKLEPSDFVLKDYKSYSALNFAMAV 446


>gi|116326450|ref|YP_803170.1| thymidylate synthetase [Enterobacteria phage RB32]
 gi|32709461|gb|AAP86749.1| thymidylate synthase [Enterobacteria phage RB32]
 gi|115344043|gb|ABI95052.1| thymidylate synthetase [Enterobacteria phage RB32]
          Length = 286

 Score =  219 bits (557), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P 
Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235

Query: 226 TLPQMIIN-PNIVD----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264
            L ++ +  P+  D          L  F +  +F L +YE H +I  K++V
Sbjct: 236 DLCELQLKFPDEFDEWDTESQVFWLSQFVKPHNFVLNNYESHPSIKGKMAV 286


>gi|281335085|gb|ADA62169.1| Thymidylate synthase [Staphylococcus aureus]
          Length = 215

 Score =  219 bits (557), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 101/184 (54%), Positives = 127/184 (69%), Gaps = 1/184 (0%)

Query: 81  DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           D +A K G LG +YG QWR W D +GN  DQ+ S++Q ++ +P SRRHIVSAWN   ID 
Sbjct: 33  DAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAWNPTEIDS 92

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
           MALPPCH +FQFYV  GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A   G + GEFI
Sbjct: 93  MALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECGLEVGEFI 152

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260
           HT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE H AI A
Sbjct: 153 HTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYESHPAIKA 211

Query: 261 KVSV 264
            ++V
Sbjct: 212 PIAV 215


>gi|322701545|gb|EFY93294.1| thymidylate synthase [Metarhizium acridum CQMa 102]
          Length = 335

 Score =  218 bits (555), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 121/315 (38%), Positives = 174/315 (55%), Gaps = 52/315 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R +++ G  R DRTG GT S F  + ++F L++      PLLTTK+V  ++V+
Sbjct: 21  YQYLDLIREILEEGEQRFDRTGTGTISIFAPRPLKFSLNRDGAPILPLLTTKRVFLRAVI 80

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--- 101
            ELLWF+  +++   L   GV IWD     E+ D       ++G+LGP+YG QWR +   
Sbjct: 81  AELLWFIEANTSSKALSDVGVKIWDGNGSREFLDNLGLTHREEGDLGPVYGFQWRHFGAE 140

Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154
                 DY G  +DQ++ ++  L+  PY RR I+SAWN   +  MALPPCH   QFYV  
Sbjct: 141 YVDAKTDYTGQGVDQLADVIDKLKNKPYDRRIIMSAWNARDLHLMALPPCHVFAQFYVSY 200

Query: 155 ------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
                                   + G L CQLYQRS D+ LG+PFNIASY+LLT M+A 
Sbjct: 201 PSRRRRNGKPSSMETNGGPTSTAPEKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIAH 260

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTL 249
           V     G   H +GD H+Y +H +  ++QL R PR  P++ I       +  ++ ED  +
Sbjct: 261 VCDLVPGSLTHVMGDAHVYADHEDALNIQLEREPRQFPEVEIARERGCGIDGWKVEDIIV 320

Query: 250 RSYEPHAAILAKVSV 264
           + Y+PH  I  K++V
Sbjct: 321 KGYDPHKTIAMKMAV 335


>gi|322705675|gb|EFY97259.1| thymidylate synthase [Metarhizium anisopliae ARSEF 23]
          Length = 335

 Score =  218 bits (555), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 120/315 (38%), Positives = 174/315 (55%), Gaps = 52/315 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG----FPLLTTKKVHWKSVV 56
           ++YLDL+R +++ G  R DRTG GT S F  + ++F L++      PLLTTK+V  ++V+
Sbjct: 21  YRYLDLIREILEEGEQRPDRTGTGTISIFAPRPLKFSLNQDGTPILPLLTTKRVFLRAVI 80

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--- 101
            ELLWF+  +++   L   GV IWD     E+ D       ++G+LGP+YG QWR +   
Sbjct: 81  AELLWFIEANTSSKALSDVGVKIWDGNGSREFLDNLGLTHREEGDLGPVYGFQWRHFGAE 140

Query: 102 -----PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154
                 DY G  +DQ++ ++  L+  PY RR I+SAWN   +  MALPPCH   QFYV  
Sbjct: 141 YVDAKTDYTGQGVDQLADVIDKLKNKPYDRRIIISAWNARDLHLMALPPCHVFAQFYVSY 200

Query: 155 ------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
                                   + G L CQLYQRS D+ LG+PFNIASY+LLT M+A 
Sbjct: 201 PSRRRRNGMASSTETNGSATSTAPEKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIAH 260

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTL 249
           V     G   H +GD H+Y +H +  ++QL R PR  P++ I       +  ++ ED  +
Sbjct: 261 VCDLVPGSLTHVMGDAHVYADHEDALNIQLEREPRQFPEVEIAREKGCGIDGWKVEDIIV 320

Query: 250 RSYEPHAAILAKVSV 264
           + Y+PH  I  K++V
Sbjct: 321 KGYDPHKTIAMKMAV 335


>gi|71013081|ref|XP_758554.1| hypothetical protein UM02407.1 [Ustilago maydis 521]
 gi|46098212|gb|EAK83445.1| hypothetical protein UM02407.1 [Ustilago maydis 521]
          Length = 554

 Score =  218 bits (554), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 124/295 (42%), Positives = 175/295 (59%), Gaps = 33/295 (11%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ--MRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           QYL+L++ VI  G  R DRTG GT + F  Q  +RFDL+ G  PLLTTK+V ++ V+ EL
Sbjct: 260 QYLELVQRVISTGESRPDRTGTGTLALFAPQPSLRFDLTNGTLPLLTTKRVFFRGVLEEL 319

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSW------ 101
           LWF+ G ++   L    V IWD    +            +G+LGP+YG QWR +      
Sbjct: 320 LWFVGGKTDAKLLTEKSVHIWDGNGSRAFLDSRGLSHRREGDLGPVYGFQWRHFGATYKD 379

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--- 156
              DY G  +DQ++S++  +R +P  RR ++SAWN A ++ MALPPCH   QF+V N   
Sbjct: 380 CDTDYAGQGVDQLASVIDKIRNNPTDRRILLSAWNPADLELMALPPCHMFAQFFVSNLDA 439

Query: 157 -----GK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
                GK  LSCQ+YQRS D+ LG+PFNIASY+LLT M+A V   +  E I  +GD H+Y
Sbjct: 440 YSKGQGKKHLSCQMYQRSCDLGLGVPFNIASYALLTYMIAKVTDCEPKELILAMGDAHVY 499

Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +H +    QL R P   P++ I  ++ D+  F ++DF ++ Y+ H  I  K+SV
Sbjct: 500 KDHVQPLKAQLERDPLPFPKLKIERDVKDIDDFTFDDFVVQGYKCHGKIDMKMSV 554


>gi|332975724|gb|EGK12607.1| thymidylate synthase [Psychrobacter sp. 1501(2011)]
          Length = 211

 Score =  217 bits (553), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 106/190 (55%), Positives = 137/190 (72%), Gaps = 16/190 (8%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL+R+V   G+++ DRTG GTRS FG Q+RFDLS GFPLLTTKKVH KS+ +EL WFL
Sbjct: 11  YLDLIRYVRDHGTEKGDRTGTGTRSHFGAQLRFDLSDGFPLLTTKKVHMKSITYELFWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADK---------DGELGPIYGVQWRSW-----PD--YDGN 107
           +GD++V YL  +GV IW+EW+           +GELGPIYG QWR++     PD  Y+ +
Sbjct: 71  KGDTHVKYLQDNGVRIWNEWSTAEQTARFGRPEGELGPIYGHQWRNYGASKKPDGSYNQD 130

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQI  +++ ++ +P SRR IVS WN A   ++ALPPCH LFQF+V +GKLSCQLYQRS
Sbjct: 131 GVDQIVEVIEQIKNNPNSRRLIVSGWNPAEATQVALPPCHTLFQFFVADGKLSCQLYQRS 190

Query: 168 GDVFLGIPFN 177
            D+FL  P N
Sbjct: 191 ADLFLLYPHN 200


>gi|321258400|ref|XP_003193921.1| thymidylate synthase [Cryptococcus gattii WM276]
 gi|317460391|gb|ADV22134.1| thymidylate synthase [Cryptococcus gattii WM276]
          Length = 317

 Score =  217 bits (552), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/297 (41%), Positives = 166/297 (55%), Gaps = 34/297 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +QYLDL++ +I  G  R DRTG GT + F     RF L+    PLLTTK+V  + V+ EL
Sbjct: 21  YQYLDLIKRIINTGEVRPDRTGTGTVTLFAPPSFRFSLANNTLPLLTTKRVFLRGVIAEL 80

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR----SWPD 103
           LWF+ G ++   L   GV IWD   +K+            G+LGP+YG QWR     + D
Sbjct: 81  LWFVSGCTDAKVLSSQGVGIWDGNGNKEFLEKVGLGHRREGDLGPVYGFQWRHFGAEYTD 140

Query: 104 YDGNV----IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
            DGN     +DQ+  ++ +++ +P  RR I+SAWN   +  MALPPCH   QFYV     
Sbjct: 141 ADGNYKGKGVDQLQRVIDTIKNNPTDRRIILSAWNPKDLPLMALPPCHMFCQFYVSLPPA 200

Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  KLSC +YQRS D+ LG+PFNIASY+LLT M+A +   +  EFI  +GD H+Y 
Sbjct: 201 DSPNSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYR 260

Query: 211 NHFEQADLQLSRSPRTLPQMI---INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H E    QL R PR  P++        I D+  F+ EDF +  Y+P   I  K+S 
Sbjct: 261 DHVEPLKTQLEREPREFPKLKWARSKEEIGDIDGFKVEDFEVEGYKPWGKIDMKMSA 317


>gi|58260182|ref|XP_567501.1| thymidylate synthase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116550|ref|XP_772947.1| hypothetical protein CNBJ2230 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|1174839|sp|P45351|TYSY_CRYNE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|83753957|pdb|2AAZ|A Chain A, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753958|pdb|2AAZ|B Chain B, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753959|pdb|2AAZ|C Chain C, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753960|pdb|2AAZ|D Chain D, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753961|pdb|2AAZ|E Chain E, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753962|pdb|2AAZ|F Chain F, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753963|pdb|2AAZ|G Chain G, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753964|pdb|2AAZ|H Chain H, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753965|pdb|2AAZ|I Chain I, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753966|pdb|2AAZ|J Chain J, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753967|pdb|2AAZ|K Chain K, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753968|pdb|2AAZ|L Chain L, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753969|pdb|2AAZ|M Chain M, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753970|pdb|2AAZ|N Chain N, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753971|pdb|2AAZ|O Chain O, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753972|pdb|2AAZ|P Chain P, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|602128|gb|AAC48931.1| thymidylate synthase [Cryptococcus neoformans var. neoformans]
 gi|50255567|gb|EAL18300.1| hypothetical protein CNBJ2230 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229551|gb|AAW45984.1| thymidylate synthase [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 317

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/297 (41%), Positives = 167/297 (56%), Gaps = 34/297 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +QYLDL+R +I  G  R DRTG GT + F     RF L+    PLLTTK+V  + V+ EL
Sbjct: 21  YQYLDLIRRIINVGEVRPDRTGTGTVALFAPPSFRFSLADNTLPLLTTKRVFLRGVIAEL 80

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IWD     E+ +K       +G+LGP+YG QWR +      
Sbjct: 81  LWFVSGCTDAKMLSSQGVGIWDGNGSKEFLEKVGLGHRREGDLGPVYGFQWRHFGAEYTD 140

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ+  ++ +++ +P  RR I+SAWN   +  MALPPCH   QF+V     
Sbjct: 141 ADGDYKGKGVDQLQRVIDTIKNNPTDRRIILSAWNPKDLPLMALPPCHMFCQFFVSLPPA 200

Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  KLSC +YQRS D+ LG+PFNIASY+LLT M+A +   +  EFI  +GD H+Y 
Sbjct: 201 DSPGSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYR 260

Query: 211 NHFEQADLQLSRSPRTLPQMI---INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H E    QL R PR  P++        I D+  F+ EDF +  Y+P   I  K+S 
Sbjct: 261 DHVEPLKTQLEREPRDFPKLKWARSKEEIGDIDGFKVEDFVVEGYKPWGKIDMKMSA 317


>gi|254490316|ref|ZP_05103505.1| thymidylate synthase [Methylophaga thiooxidans DMS010]
 gi|224464449|gb|EEF80709.1| thymidylate synthase [Methylophaga thiooxydans DMS010]
          Length = 273

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/272 (39%), Positives = 151/272 (55%), Gaps = 37/272 (13%)

Query: 30  FGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS-------NVSYLHRHGVSIWDE 82
           FG  +RFDLS+GFP  TTK+V+WK+   E+LW L+G S       N+  L    V IW E
Sbjct: 2   FGETLRFDLSEGFPAFTTKRVYWKTAFKEMLWMLKGKSKWGTGNPNIRDLLEQNVHIWSE 61

Query: 83  WADKD----------------------------GELGPIYGVQWRSWPDYDGNVIDQISS 114
           W  K                             G+LGP+YG QWR+W   DG  IDQ+S 
Sbjct: 62  WPHKKYVDETGDDITLKSFEERVLTDDEFASQWGDLGPVYGKQWRAWKTEDGREIDQVSE 121

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFL 172
           +++ ++ +P SRR I   WNV  +D+MALPPCH  +QF+VD   G +S  L QRS D FL
Sbjct: 122 VLEQIKNNPTSRRIIFEGWNVGELDQMALPPCHKHYQFFVDPVKGTVSGSLVQRSADTFL 181

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G+ FN+ + +L+T ++A   G+  GE +    DVH+Y NH +Q   QLSR P+  P+++I
Sbjct: 182 GVAFNVCNLALITTLIAEHTGYMPGEIVWYGLDVHVYLNHLDQVREQLSREPKAFPKLVI 241

Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                 L  +  +D  L  Y+PH AI A V++
Sbjct: 242 KSKKKSLFDYTIDDLGLEGYDPHPAIKAPVAI 273


>gi|228861163|ref|YP_002854186.1| thymidylate synthetase [Enterobacteria phage RB51]
 gi|32709467|gb|AAP86752.1| thymidylate synthase [Enterobacteria phage RB61]
 gi|227438837|gb|ACP31149.1| thymidylate synthetase [Enterobacteria phage RB51]
          Length = 286

 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 170/291 (58%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + EL+
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELI 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P 
Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILCREPM 235

Query: 226 TLPQMIIN-PNIVD----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264
            L ++ +  P+  D          L  F +  +F L +YE H  I  K++V
Sbjct: 236 DLCELQLKFPDEFDEWDTESQVFWLSQFAKPHNFVLNNYESHPPIKGKMAV 286


>gi|294644847|ref|ZP_06722587.1| thymidylate synthase [Bacteroides ovatus SD CC 2a]
 gi|292639785|gb|EFF58063.1| thymidylate synthase [Bacteroides ovatus SD CC 2a]
          Length = 151

 Score =  216 bits (549), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 96/151 (63%), Positives = 121/151 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISIFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG +YG QWRSWPDY+G  IDQIS +V++L+
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
            +P SRR IVSAWNVA ++ M LPPCH  FQ
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQ 151


>gi|291287305|ref|YP_003504121.1| thymidylate synthase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884465|gb|ADD68165.1| thymidylate synthase [Denitrovibrio acetiphilus DSM 12809]
          Length = 287

 Score =  215 bits (548), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/290 (42%), Positives = 164/290 (56%), Gaps = 29/290 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y D++R+V+  G    +RTGV T S F Y  R +L+ G+PLLTTKK+ + S+VHEL 
Sbjct: 1   MQVYKDMVRYVMDNGVYLPNRTGVATYSVFSYFYRVNLADGYPLLTTKKMFFNSMVHELF 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR------------SW------- 101
           W+L G+ ++  L R    IWD WAD++G L   YG  WR            +W       
Sbjct: 61  WYLSGEEHIKDL-RTKTKIWDAWADEEGLLETAYGRFWRRFPVPEKGLNGENWGKKWTHK 119

Query: 102 -PDYDGNVIDQISSIVQSLRA---DP---YSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154
            P+    V DQI  ++ +L+    +P     RR +VSAW+ A   +  LPPCH  + F V
Sbjct: 120 DPETGQMVFDQIQYVIDNLKEVKNNPNCSAQRRLVVSAWHPANAAESKLPPCHYTYCFSV 179

Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
             GKL+C L QRSGD+ LGIPFN++ Y+LLTMMLA   G + GEF HT+ D H+Y NH E
Sbjct: 180 KAGKLNCHLTQRSGDIALGIPFNLSCYALLTMMLAKETGLKVGEFAHTIIDAHIYENHME 239

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               QL R P TLP++ I     D LSF   D  L  YE H  I  +V+V
Sbjct: 240 GLKEQLEREPLTLPKVEIADKPFDQLSF--ADIKLVDYESHPGIRFEVAV 287


>gi|269120222|ref|YP_003308399.1| thymidylate synthase [Sebaldella termitidis ATCC 33386]
 gi|268614100|gb|ACZ08468.1| thymidylate synthase [Sebaldella termitidis ATCC 33386]
          Length = 289

 Score =  215 bits (547), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/292 (42%), Positives = 164/292 (56%), Gaps = 31/292 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++++V++ G  + +RTGV T S F Y  R DLS+G+PLLTTKK+++ S++ EL 
Sbjct: 1   MKQYLDMVKYVLENGIKKENRTGVDTISNFAYFYRVDLSEGYPLLTTKKMYFNSMLKELF 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVI------- 109
           W+L G+ ++  L R    IWD WAD++G L   YG  WR +P      DG V        
Sbjct: 61  WYLSGEEHIKNL-RKDTKIWDAWADEEGRLETAYGRFWRRYPVPETHLDGEVFADESSKW 119

Query: 110 -----------DQISSIVQSLR---ADPY---SRRHIVSAWNVALIDKMALPPCHCLFQF 152
                      DQI  ++ +L+    +P     RR IV AWN        LPPCH  F F
Sbjct: 120 VTRESNGQLVFDQIGYVIDTLKEMKTNPNHKNGRRLIVLAWNPGNAAISKLPPCHYTFAF 179

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            V   KL+C L QRSGD+ LGIPFN+A YSLLTMM+A   G++ GEF HT+ D H+Y NH
Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEPGEFAHTIIDAHIYENH 239

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL R P  L ++ I     D L+F  +D  L  Y  H  I  +V+V
Sbjct: 240 IEGLKEQLKREPLKLSKIEIADKPFDELTF--DDVKLVDYVSHPLIKFEVAV 289


>gi|284504438|ref|YP_003407153.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Marseillevirus]
 gi|282935876|gb|ADB04191.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Marseillevirus]
          Length = 444

 Score =  215 bits (547), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 110/275 (40%), Positives = 153/275 (55%), Gaps = 20/275 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFD-LSKGFPLLTTKKVHWKSVVHELLWF 62
           YL LL  V+  G  R+DRTG GTRS FG  + F+ +S+ FPL+T K++ W  ++ ELLWF
Sbjct: 164 YLSLLSEVLYSGEKRKDRTGTGTRSLFGRHLLFENISEKFPLITVKRMAWGCILSELLWF 223

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWRSW--------PD 103
           L G ++   L     +IW + + +           +G+ GPIYG QWR W         D
Sbjct: 224 LSGSTDSKMLELQNNNIWKKNSSRKFLDGRGLSYREGDCGPIYGFQWRHWGAKYVDCDTD 283

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQI SI+  ++ +  SRR ++SAWNV+ +DKM LPPCH   QFYV    + C L
Sbjct: 284 YRGQGEDQILSIISEIQNNATSRRLVLSAWNVSDLDKMCLPPCHSFSQFYVRGDFVDCHL 343

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+ L  ++A   G + G    + GDVH+Y  H + A   L R 
Sbjct: 344 YQRSADLALGVPFNIASYACLLSIIAEASGKKAGNLTMSFGDVHIYETHIDNAQKMLERL 403

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           P   P++ +  +   L   +  DF L  Y    A+
Sbjct: 404 PHKTPKLKVKISDNTLFCLKKGDFELDGYSCCGAL 438


>gi|239995918|ref|ZP_04716442.1| thymidylate synthase [Alteromonas macleodii ATCC 27126]
          Length = 182

 Score =  215 bits (547), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 101/181 (55%), Positives = 128/181 (70%), Gaps = 13/181 (7%)

Query: 97  QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID-------------KMAL 143
           QWRSW   DG  +DQI+ +V+ ++ +P SRR IVS WN A++              K AL
Sbjct: 2   QWRSWDRGDGTSVDQIAEVVEQIKNNPDSRRLIVSGWNPAVLPDTNYSPKENAAMGKQAL 61

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           PPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLTMM+A V   + G+FIHTL
Sbjct: 62  PPCHTLFQFYVLDGKLSCQLYQRSGDIFLGVPFNIASYALLTMMMAQVCDLEPGDFIHTL 121

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           GD HLY+NH EQ +LQLSR P   P M INP + D+  F ++DFTL++Y+ H  I A V+
Sbjct: 122 GDAHLYSNHLEQVELQLSREPFERPTMEINPEVKDIFGFSFDDFTLKNYQSHPHIKAPVA 181

Query: 264 V 264
           +
Sbjct: 182 I 182


>gi|32709479|gb|AAP86758.1| thymidylate synthase [Enterobacteria phage T6]
 gi|113952002|gb|ABI48939.1| Td [Enterobacteria phage T6]
          Length = 286

 Score =  214 bits (546), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 125/291 (42%), Positives = 169/291 (58%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  +V  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  + A +     G+ I + G+ H+Y NH EQ    L R P 
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIAAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235

Query: 226 TLPQMIIN-PNIVD----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264
            L ++ +  P+  D          L  F +  +F L +Y  H  I  K++V
Sbjct: 236 DLCELQLKFPDEFDEWNTESQVFWLSQFAKPHNFVLNNYVSHPPIKGKMAV 286


>gi|167464449|ref|ZP_02329538.1| Thymidylate synthase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 230

 Score =  214 bits (545), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 98/183 (53%), Positives = 128/183 (69%)

Query: 82  EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           ++A + G+LG +YG QWR+W   +G  IDQ+  I+ +++ +P SRR IVSAWN   I  M
Sbjct: 48  QFALEFGDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVSAWNPEDIPSM 107

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
            LPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A   G + GEFIH
Sbjct: 108 VLPPCHTLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHECGIEAGEFIH 167

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
           TLGD H+Y+NH +Q  LQLSR P+ LP + INP +  +      D  L  Y+PH +I A 
Sbjct: 168 TLGDAHVYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEGYDPHPSIKAP 227

Query: 262 VSV 264
           V+V
Sbjct: 228 VAV 230


>gi|289618154|emb|CBI55370.1| unnamed protein product [Sordaria macrospora]
          Length = 353

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 166/326 (50%), Gaps = 63/326 (19%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG------------------- 41
           +QYLDL+R +   G  R DRTG GT S F    ++F LSK                    
Sbjct: 28  YQYLDLVRQIFDEGELREDRTGTGTYSIFAPTPLKFALSKPSPSASGASADPSSPSYSFE 87

Query: 42  --FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD------------KD 87
              PLLTTK+V  K+V+ ELLWF+   ++ + L   GV IWD                K+
Sbjct: 88  PILPLLTTKRVFTKAVLLELLWFISASTSSTTLSSQGVKIWDGNGSRAFLDMLGLSHRKE 147

Query: 88  GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           G+LGP+YG QWR +         DY G  +DQ+  I+ +LR +PY RR I+SAWN   + 
Sbjct: 148 GDLGPVYGFQWRHFGAEYVDAETDYTGQGVDQLQRIIDTLRTNPYDRRLILSAWNPKDMS 207

Query: 140 KMALPPCHCLFQFYVD--------------------NGKLSCQLYQRSGDVFLGIPFNIA 179
           +M LPPCH   QFYV                      G L CQLYQRS D+ LG+PFNIA
Sbjct: 208 QMVLPPCHMFAQFYVSYPGSRERTRKEGEPTKQEKPKGHLHCQLYQRSCDMGLGVPFNIA 267

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LLT MLA V     G   H +GD H+Y NH +    QL R PR  P + I       
Sbjct: 268 SYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQLEREPREFPTLEIKREKRGS 327

Query: 240 L-SFRYEDFTLRSYEPHAAILAKVSV 264
           +  ++ EDF ++ YEPH  I  ++SV
Sbjct: 328 IDGWKAEDFVVKGYEPHKTIAMEMSV 353


>gi|32709469|gb|AAP86753.1| thymidylate synthase [Enterobacteria phage RB23]
          Length = 286

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/291 (42%), Positives = 170/291 (58%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L++ +++ G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+
Sbjct: 1   MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWAD---KD-----GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +   KD     GELGPIYG QWR   D+ 
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWR---DFG 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQI  ++  ++  P  RR IVSAWN A + +MALPPCH  +QF V NG L  Q YQ
Sbjct: 118 G--VDQIIEVIDRIKKLPNDRRQIVSAWNPAELKQMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P 
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKICNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235

Query: 226 TLPQMIIN-PNIVD----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264
            L ++ +  P+  D          L  F +  +F L  Y  H  I  K++V
Sbjct: 236 DLCELQLKFPDEFDEWDTESQVFWLSQFAKPHNFVLNDYVSHPPIKGKMAV 286


>gi|166240844|ref|ZP_02240716.1| Thymidylate synthase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 182

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 97/177 (54%), Positives = 124/177 (70%)

Query: 88  GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCH 147
           G+LG +YG QWR+W   +G  IDQ+  I+ +++ +P SRR IVSAWN   I  M LPPCH
Sbjct: 6   GDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVSAWNPEDIPSMVLPPCH 65

Query: 148 CLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVH 207
            LFQFYV  G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A   G + GEFIHTLGD H
Sbjct: 66  TLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHECGIEAGEFIHTLGDAH 125

Query: 208 LYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +Y+NH +Q  LQLSR P+ LP + INP +  +      D  L  Y+PH +I A V+V
Sbjct: 126 VYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEGYDPHPSIKAPVAV 182


>gi|311993503|ref|YP_004010368.1| Td dTMP synthase [Acinetobacter phage Acj9]
 gi|295917460|gb|ADG60131.1| Td dTMP synthase [Acinetobacter phage Acj9]
          Length = 320

 Score =  212 bits (539), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/320 (38%), Positives = 173/320 (54%), Gaps = 56/320 (17%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M QY DL++ ++  G     +RTG GT S FG Q++FDL+  FP +TTKK+ WK+VV EL
Sbjct: 1   MQQYHDLMQKILDEGDLIETERTGTGTLSIFGEQLKFDLADYFPAITTKKLAWKAVVSEL 60

Query: 60  LWFLRGDSNVSYLHR--HG---------VSIWDEWADK--------DGELGPIYGVQWRS 100
           LWFL+G SN++ L    HG          +IWD   +K        DGE+G IYG QWRS
Sbjct: 61  LWFLKGSSNLNELRAILHGEENRFNEEKKTIWDGNYNKQAKDLGYTDGEMGDIYGAQWRS 120

Query: 101 -----------------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI----- 138
                            + DY+   +DQ+  ++   + +P SRR IV AWN  ++     
Sbjct: 121 FGRKTLQIEDENCKVVCYDDYEVKGVDQVKLVLDEAKRNPSSRRLIVQAWNPDVVWNSKK 180

Query: 139 -----------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
                      ++ ALPPCH ++Q  + NG+L     QRS D+FLG+ FNIASY+LL  +
Sbjct: 181 TKVGHTMIIGGNEAALPPCHLMYQLRIVNGRLDMSWSQRSNDIFLGVCFNIASYALLQHI 240

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR---Y 244
            A ++G + G+    LGD H+Y NH +Q  LQLSR   + PQ+ INP +  L  F     
Sbjct: 241 FARILGLKVGKLTGFLGDCHIYLNHVDQVKLQLSRDHLSKPQLEINPALKTLEDFENATV 300

Query: 245 EDFTLRSYEPHAAILAKVSV 264
           +DF L     H AI A ++V
Sbjct: 301 DDFKLVGLITHGAIKADMAV 320


>gi|255019178|ref|ZP_05291304.1| thymidylate synthase [Listeria monocytogenes FSL F2-515]
          Length = 179

 Score =  210 bits (535), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/172 (56%), Positives = 123/172 (71%), Gaps = 1/172 (0%)

Query: 79  IWDE-WADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           I DE +A+K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IVSAWN   
Sbjct: 8   IEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIVSAWNPED 67

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  +G   G
Sbjct: 68  IPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAREVGLDVG 127

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
           EFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L
Sbjct: 128 EFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISL 179


>gi|302309826|ref|XP_448463.2| hypothetical protein [Candida glabrata CBS 138]
 gi|196049169|emb|CAG61424.2| unnamed protein product [Candida glabrata]
          Length = 256

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/276 (42%), Positives = 157/276 (56%), Gaps = 43/276 (15%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL   +IK G  R DRTG G                      KK+  + V    +W 
Sbjct: 10  QYLDLCERIIKEGEFRPDRTGTGCTD------------------AKKLSDQGVK---IW- 47

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSW--------PDYDGNVIDQIS 113
             G+ +  YL + G      + D ++G+LGP+YG QWR +         DY G  +DQ+ 
Sbjct: 48  -EGNGSREYLDKMG------FVDRREGDLGPVYGFQWRHFGAEYKTCEDDYTGQGVDQLK 100

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---NGK--LSCQLYQRSG 168
            ++  L+ +PY RR I+SAWN     KMALPPCH   QFYV+   +GK  LSC LYQRS 
Sbjct: 101 EVIHKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFSQFYVNFPKDGKPQLSCLLYQRSC 160

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+ LG+PFNIASY+LLT M+A V   + GEFIHTLGD H+Y +H +    Q+SR+PR  P
Sbjct: 161 DMGLGVPFNIASYALLTKMIAHVCDMEPGEFIHTLGDAHVYKDHVDALKEQISRTPRDFP 220

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           ++ IN  + D+  F++EDF L  Y+PH  I   +SV
Sbjct: 221 KLRINRKVSDIDDFKFEDFVLEEYDPHPRIQMNMSV 256


>gi|26353640|dbj|BAC40450.1| unnamed protein product [Mus musculus]
          Length = 222

 Score =  207 bits (526), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 20/222 (9%)

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 1   IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 60

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 61  DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 120

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 121 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 180

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 181 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 222


>gi|85089414|ref|XP_957941.1| thymidylate synthase [Neurospora crassa OR74A]
 gi|28919227|gb|EAA28705.1| thymidylate synthase [Neurospora crassa OR74A]
          Length = 368

 Score =  206 bits (523), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 167/337 (49%), Gaps = 74/337 (21%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG------------------- 41
           +QYLDL+R ++  G  R DRTG GT S F    ++F LS+                    
Sbjct: 32  YQYLDLVRQILDEGELREDRTGTGTYSIFAPTPLKFALSRPSSSSPSSGSSSDPSSPDYT 91

Query: 42  ----FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD------------ 85
                PLLTTK+V  K+V+ ELLWF+   ++ + L   GV IWD                
Sbjct: 92  YTPILPLLTTKRVFTKAVLLELLWFISASTSSTTLSAQGVKIWDGNGSRAFLDMLGLSHR 151

Query: 86  KDGELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           K+G+LGP+YG QWR +         DY G  +DQ+  I+ +LR +PY RR I+SAWN   
Sbjct: 152 KEGDLGPVYGFQWRHFGAEYVDCETDYTGQGVDQLQRIIDTLRNNPYDRRLILSAWNPKD 211

Query: 138 IDKMALPPCHCLFQFYVD-----------------------------NGKLSCQLYQRSG 168
           + +M LPPCH   QFYV                               G L CQLYQRS 
Sbjct: 212 MSQMVLPPCHMFAQFYVSYPGSRTRGGATQTQNKEGELDTPPKEKKPRGHLHCQLYQRSC 271

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+ LG+PFNIASY+LLT MLA V     G   H +GD H+Y NH +    QL R PR  P
Sbjct: 272 DMGLGVPFNIASYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQLEREPREFP 331

Query: 229 QMIINPNIVDLL-SFRYEDFTLRSYEPHAAILAKVSV 264
            + I       +  ++ EDF ++ YEPH  I  ++SV
Sbjct: 332 TLEIQREKGGSIDGWKAEDFVIKGYEPHKTIAMEMSV 368


>gi|26353070|dbj|BAC40165.1| unnamed protein product [Mus musculus]
          Length = 222

 Score =  205 bits (522), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 20/222 (9%)

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 1   IKGYTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 60

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 61  DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 120

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 121 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 180

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 181 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 222


>gi|171678407|ref|XP_001904153.1| hypothetical protein [Podospora anserina S mat+]
 gi|170937273|emb|CAP61930.1| unnamed protein product [Podospora anserina S mat+]
          Length = 303

 Score =  204 bits (520), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 116/285 (40%), Positives = 154/285 (54%), Gaps = 41/285 (14%)

Query: 21  RTGVGTRSTFG-YQMRFDLSKG-----FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74
           RTG GT S F    ++F LS        PLLTTK+V  ++++ ELLWF+ G ++   L  
Sbjct: 19  RTGTGTYSLFAPSPLKFSLSTPTGTPLLPLLTTKRVFTRAIILELLWFISGSTSSLPLSS 78

Query: 75  HGVSIWDEWADK------------DGELGPIYGVQWR--------SWPDYDGNVIDQISS 114
             V IWD    +            +G+LGP+YG QWR        S  DY G  +DQ++ 
Sbjct: 79  QNVKIWDGNGSRAFLDSLGLTHREEGDLGPVYGFQWRHFGAEYVDSKTDYTGQGVDQLAR 138

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--------------NGKLS 160
           IVQ+L+ +PY RR I+SAWN   + +M LPPCH   QFYV                G L 
Sbjct: 139 IVQTLKTNPYDRRLILSAWNPKDMSQMVLPPCHMFAQFYVSYPRSRKETEEGREVKGHLH 198

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT MLA V     G   H +GD H+Y NH +    QL
Sbjct: 199 CQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQL 258

Query: 221 SRSPRTLPQMIINPNIVDLL-SFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I       +  ++ EDF ++ Y PH  I  ++SV
Sbjct: 259 EREPREFPELEIKREKGGSIDGWKLEDFEIKGYNPHKVISMEMSV 303


>gi|169835631|ref|ZP_02868819.1| Thymidylate synthase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 205

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 102/194 (52%), Positives = 130/194 (67%), Gaps = 14/194 (7%)

Query: 81  DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +EW    G+LGP+YGVQWR WPD  G  IDQI + +  ++ +P SRR+IVSAWNVA ID 
Sbjct: 16  EEW----GDLGPVYGVQWRKWPDGKGGTIDQIQNAIDMIKNNPMSRRNIVSAWNVAEIDD 71

Query: 141 MA----LPPCHCLFQFYV---DNG---KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           +A    LPPCH +FQF V   +NG   KL   L QRS D+FLG+PFNIASY+LL  M+A 
Sbjct: 72  IARAGGLPPCHTIFQFNVRPGENGEKDKLDLTLTQRSADIFLGVPFNIASYALLLSMIAQ 131

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
           V G Q GEF+HTL   H+YNNH  Q D QLSR P  LP++ +NP+I ++  F  +D  L 
Sbjct: 132 VTGKQPGEFVHTLNSAHIYNNHRVQVDEQLSRHPLPLPKLWLNPDIKNIDDFTIKDIRLE 191

Query: 251 SYEPHAAILAKVSV 264
            YE H+ I A ++V
Sbjct: 192 GYESHSPIKAPIAV 205


>gi|151945700|gb|EDN63941.1| thymidylate synthase [Saccharomyces cerevisiae YJM789]
          Length = 259

 Score =  201 bits (512), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/280 (41%), Positives = 153/280 (54%), Gaps = 48/280 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + +I  G  R DRTG                    LL+ + V         +W
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTDAN----------------LLSEQGVK--------IW 46

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW--------PDYDGNVIDQIS 113
              G+ +  YL + G         K G+LGP+YG QWR +         DY G  IDQ+ 
Sbjct: 47  --DGNGSREYLDKMGFK-----DRKVGDLGPVYGFQWRHFGAKYKTCDDDYTGQGIDQLK 99

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGK--LSCQLY 164
            ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV        +GK  LSC LY
Sbjct: 100 QVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKEGEGSGKPRLSCLLY 159

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y +H +    Q+SR+P
Sbjct: 160 QRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDALKEQISRNP 219

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 220 RPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 259


>gi|15896255|ref|NP_349604.1| thymidylate synthase [Clostridium acetobutylicum ATCC 824]
 gi|25091479|sp|Q97EV3|TYSY_CLOAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|15026060|gb|AAK80944.1|AE007797_6 Thymidylate synthase [Clostridium acetobutylicum ATCC 824]
 gi|325510410|gb|ADZ22046.1| thymidylate synthase [Clostridium acetobutylicum EA 2018]
          Length = 263

 Score =  201 bits (512), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 105/266 (39%), Positives = 155/266 (58%), Gaps = 11/266 (4%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            +YLD++ ++++ G    +RTG+ T       M+FDLSK FP+LTTK V +K+ V ELLW
Sbjct: 6   EKYLDIIENILENGYYDNNRTGIETYKLPHQIMQFDLSKEFPILTTKFVAFKTSVKELLW 65

Query: 62  FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
             +  SN V  L    V+IWDEW  +DG +G  YG Q   +         QI +++ +L+
Sbjct: 66  IYKDQSNDVRKLQNENVTIWDEWMLEDGTIGKAYGYQVAKFK--------QIDNLIDTLK 117

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR ++S WN+A +  M+L PC     + V NGKL+C L QRSGD+ LG+PFN+  
Sbjct: 118 TDPQSRRMLISLWNIADLKDMSLTPCCYETLWDVQNGKLNCMLVQRSGDMPLGVPFNMCQ 177

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVD 238
           Y++L  ++A V G + G F H + + H+Y N  E   +QL R  +    P++ INPNI +
Sbjct: 178 YAVLVHLIAQVTGLKPGLFTHVINNAHIYKNQIEGMKIQLKRRDKAYEAPKLWINPNIKN 237

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
              F  +D  L  Y+ H  I  +V+V
Sbjct: 238 FYDFTADDIKLIDYKHHDKIKMEVAV 263


>gi|313892946|ref|ZP_07826523.1| thymidylate synthase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442299|gb|EFR60714.1| thymidylate synthase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 263

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/265 (39%), Positives = 155/265 (58%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ ++++ G+  ++RTGV T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILEHGTYGQNRTGVATYKLPHQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+ +++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVRVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  +D MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVADGHLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239
           + L  M+A V G + G+F H + + H+Y NH E    QL+R  + L  P++I+NP + D 
Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHVYENHVEALREQLARRDQALPAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V+V
Sbjct: 239 YDFTPEDVTLDGYEHLGKLSMTVAV 263


>gi|187903049|ref|YP_001883340.1| thymidylate synthase [Musca domestica salivary gland hypertrophy
           virus]
 gi|187384698|gb|ACD03471.1| thymidylate synthase [Musca domestica salivary gland hypertrophy
           virus]
          Length = 294

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/281 (40%), Positives = 167/281 (59%), Gaps = 28/281 (9%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL L+R V++ G+ + +RTGV T+  FG Q+R+DL      +LTTKKV ++S + ELLWF
Sbjct: 10  YLTLVRRVLRDGTLKSNRTGVDTKYIFGDQLRYDLRDNRIAMLTTKKVFFRSALEELLWF 69

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW--------P 102
           LRGD+N + L   GV+IW      E+ D       +   LGPIYG QWR +         
Sbjct: 70  LRGDTNQANLAAKGVNIWRGNSTREYLDSRKLPYPEHESLGPIYGFQWRHFGARYIDCHT 129

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLS 160
           DY G  +DQ++  +  ++ +P SRR I++AWN   +DKM LPPCH   QF V+   G+LS
Sbjct: 130 DYTGQGVDQLAQCMHQIQYEPSSRRMIMTAWNPNDLDKMVLPPCHMSIQFSVNEKLGELS 189

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             + QRS D+ LG+PFN+ SYSL+  +LA   G + GE + + GD+H+Y  H + A  Q+
Sbjct: 190 GHMTQRSADLMLGVPFNLVSYSLMLHILAHKFGLKAGELVTSYGDLHIYVPHIKNAMRQV 249

Query: 221 SRSPRTLPQMIIN---PNIVDLLSFRYEDFTLRSYEPHAAI 258
           SR P   PQ+ +       V+ L+   +DF +++Y  H+ +
Sbjct: 250 SRLPYASPQIELKFGRDKRVEELTV--DDFAVKNYRHHSQL 288


>gi|1420229|emb|CAA99267.1| CDC21 [Saccharomyces cerevisiae]
          Length = 259

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/280 (41%), Positives = 153/280 (54%), Gaps = 48/280 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + +I  G  R DRTG                    LL+ + V         +W
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTDAN----------------LLSEQGVK--------IW 46

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW--------PDYDGNVIDQIS 113
              G+ +  YL + G         K G+LGP+YG QWR +         DY G  IDQ+ 
Sbjct: 47  --DGNGSREYLDKMGFK-----DRKVGDLGPVYGFQWRHFGAKYKTCDDDYTGQGIDQLK 99

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGK--LSCQLY 164
            ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV        +GK  LSC LY
Sbjct: 100 QVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKEGEGSGKPRLSCLLY 159

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y +H +    Q++R+P
Sbjct: 160 QRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDALKEQITRNP 219

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 220 RPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 259


>gi|238018729|ref|ZP_04599155.1| hypothetical protein VEIDISOL_00573 [Veillonella dispar ATCC 17748]
 gi|237865200|gb|EEP66490.1| hypothetical protein VEIDISOL_00573 [Veillonella dispar ATCC 17748]
          Length = 263

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ ++++ G+  ++RTGV T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILEHGTYGQNRTGVATYKLPHQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+  ++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVRVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  +D MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVADGHLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239
           + L  M+A V G + G+F H + + H+Y NH E    QL+R  + L  P++I+NP + D 
Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHVYENHVEALREQLARRDQALSAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V+V
Sbjct: 239 YDFTPEDVTLDGYEHLGKLSMTVAV 263


>gi|255025022|ref|ZP_05297008.1| thymidylate synthase [Listeria monocytogenes FSL J1-208]
          Length = 159

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/159 (55%), Positives = 113/159 (71%)

Query: 91  GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150
           G IYG QWR W    G  IDQ++ +++ ++ +P SRR IVSAWN   I  MALPPCH LF
Sbjct: 1   GNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLF 60

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           QFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  +G   GEFIHT+GD HLYN
Sbjct: 61  QFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAREVGLDVGEFIHTMGDAHLYN 120

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
           NH EQ   QLSR+P  LP+++++     +  F   D +L
Sbjct: 121 NHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISL 159


>gi|77461594|ref|YP_351101.1| thymidylate synthase [Pseudomonas fluorescens Pf0-1]
 gi|77385597|gb|ABA77110.1| thymidylate synthase [Pseudomonas fluorescens Pf0-1]
          Length = 323

 Score =  199 bits (507), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 167/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HVI  G+ + +RTGV T S  G  +RFDL +GFP +TT+K+ +KS + E+ 
Sbjct: 1   MKQYLDLVSHVINNGTKQANRTGVNTISFPGAMLRFDLQEGFPAITTRKMAFKSAIGEMC 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGEDDLGEIYGVQWRKWPAYKQIP 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   V ++  DP SRR +   WN
Sbjct: 121 LSNTAAIEQTLSNGYKQIAQGEEDGQAYVVLYKAIDQVRQCVDTIIKDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + QL R P  +P++ I+   P       ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPFAMPKLKISDRVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  YE HA + A ++V
Sbjct: 301 VEPSDFSLEGYEHHAPMTAPMAV 323


>gi|219123048|ref|XP_002181844.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406445|gb|EEC46384.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 217

 Score =  199 bits (507), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 132/212 (62%), Gaps = 23/212 (10%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL RH++  G  R DRTG GT S FG QMRF L  G  PLLTTK+V W+ V  ELLW
Sbjct: 6   QYLDLCRHILDHGVHRGDRTGTGTLSQFGTQMRFSLRDGTLPLLTTKRVFWRGVAEELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW-------- 101
           F+ G++N + L    + IWD     D            G+LGP+YG QWR +        
Sbjct: 66  FVAGNTNANDLAAKDIRIWDGNGSPDFLDSWGLGHREVGDLGPVYGFQWRHFGATYGTIH 125

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--L 159
            DY G  +DQ++  +  ++ +P  RR I+SAWN A ++ MALPPCH   QFYVD  K  L
Sbjct: 126 DDYTGKGVDQLAECIDKIKNNPEDRRIILSAWNPADLELMALPPCHMFRQFYVDTEKNEL 185

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           SCQ+YQRS D+ LG+PFNIASY+LLT M+A V
Sbjct: 186 SCQMYQRSADMGLGVPFNIASYALLTHMIAHV 217


>gi|70733180|ref|YP_262953.1| thymidylate synthase [Pseudomonas fluorescens Pf-5]
 gi|68347479|gb|AAY95085.1| thymidylate synthase [Pseudomonas fluorescens Pf-5]
          Length = 323

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 166/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HVI  G+ + +RTGV T S  G  +R+DL +GFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVAHVINNGTKQANRTGVNTISFPGAMLRYDLKEGFPAITTRKMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDY---- 104
            FLRG +N +     G  +WD+ A++            D +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGDDDLGEIYGVQWRKWPAYKQIK 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   V ++  DP SRR +   WN
Sbjct: 121 TSNQAAIDLALSQGYRQIAAGEEDGQGYVVLYKAIDQVRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V   ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + QL R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPFPMPKLVISERVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  YE HA + A ++V
Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323


>gi|302876686|ref|YP_003845319.1| thymidylate synthase [Clostridium cellulovorans 743B]
 gi|307687361|ref|ZP_07629807.1| thymidylate synthase [Clostridium cellulovorans 743B]
 gi|302579543|gb|ADL53555.1| thymidylate synthase [Clostridium cellulovorans 743B]
          Length = 263

 Score =  199 bits (505), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 104/265 (39%), Positives = 153/265 (57%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+++ ++  G   ++RTGV T        +F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLDIVQDILDNGYYDQNRTGVATYKLPHKVFQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    VSIWDEW  +DG +G  YG Q   +         QI  ++++L+ 
Sbjct: 67  YKDQSNDVRKLQEQNVSIWDEWMLEDGTIGKAYGYQVAKYK--------QIDKLIEALKD 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ WN+  +  MAL PC  L  + V +G+L+C L QRSGD+ LG+PFN+A Y
Sbjct: 119 NPQDRRMMINLWNIDDLKDMALQPCCFLTLWDVTDGRLNCMLVQRSGDIPLGVPFNMAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVDL 239
           ++L  ++A V G + G F H + + H+Y N  E   LQL+R       P++ INP I + 
Sbjct: 179 AVLVHLIAQVTGLKPGLFTHVINNAHIYENQVEGMKLQLTRREEAYDAPKIWINPEIKNF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F+ ED  L  Y+ H  I  +VSV
Sbjct: 239 YDFKPEDIKLEGYQHHPVIKMEVSV 263


>gi|154272075|ref|XP_001536890.1| thymidylate synthase [Ajellomyces capsulatus NAm1]
 gi|150408877|gb|EDN04333.1| thymidylate synthase [Ajellomyces capsulatus NAm1]
          Length = 315

 Score =  198 bits (504), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/262 (43%), Positives = 142/262 (54%), Gaps = 57/262 (21%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46
           HQYL L+R +++ G  R DRTG GT S F   Q+RF LSK                PLLT
Sbjct: 47  HQYLRLIRSILETGEHRPDRTGTGTCSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+Y
Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166

Query: 95  GVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           G QWR        +  DY G  +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC
Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226

Query: 147 HCLFQFYVD----------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           H   QFYV                        G LSCQLYQRS D+ LG+PFNIASY+LL
Sbjct: 227 HMFAQFYVSFPAGDRDDGGEENEDQNEKEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286

Query: 185 TMMLASVIGFQYGEFIHTLGDV 206
           T MLA       G  IHT+GD 
Sbjct: 287 THMLAHAADLHPGTLIHTMGDA 308


>gi|330806918|ref|YP_004351380.1| Thymidylate synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375026|gb|AEA66376.1| Thymidylate synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 323

 Score =  198 bits (503), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HVIK G+ + +RTGV T S  G  +R+DL  GFP +TT+K+ +KS + E+ 
Sbjct: 1   MKQYLDLVAHVIKNGTKQANRTGVNTISFPGAMLRYDLKDGFPAITTRKMAFKSAIGEMC 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYDG-- 106
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGEDDLGEIYGVQWRKWPAYKQIP 120

Query: 107 --------------------------------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   V ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEQTLAQGYRQIAEGEENGQAYVVLYKAIDQVRQCVDTIIKDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + QL+R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLTREPFPMPKLVISERVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ HA + A ++V
Sbjct: 301 VEPSDFSLEGYQHHAPMTAPMAV 323


>gi|170719511|ref|YP_001747199.1| thymidylate synthase [Pseudomonas putida W619]
 gi|169757514|gb|ACA70830.1| Thymidylate synthase [Pseudomonas putida W619]
          Length = 323

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI+ G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIENGTLQENRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLRG  N       G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEMAEKAGFRRIAQDEEDGQAFVVLYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V   ++S  LY RS D+ LG PFN+   + L  +   + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + QL R P   P+++I+   P   +   +  E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  YE HA + A ++V
Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323


>gi|104784144|ref|YP_610642.1| thymidylate synthase [Pseudomonas entomophila L48]
 gi|95113131|emb|CAK17859.1| thymidylate synthase (TS) (TSase) [Pseudomonas entomophila L48]
          Length = 323

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 166/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI  G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIDNGTLQENRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLRG  N       G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEMAEKAGFRRIAQDEEDGQAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  +   + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245
           G+    F + +GD H+Y NH +  + Q+ R P   P+++I+  +     + +YE      
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMKREPLAAPKLVISDRVPAFAKTGKYEPEWLEK 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  YE HA + A ++V
Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323


>gi|304415491|ref|ZP_07396130.1| thymidylate synthase [Candidatus Regiella insecticola LSR1]
 gi|304282650|gb|EFL91174.1| thymidylate synthase [Candidatus Regiella insecticola LSR1]
          Length = 155

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 83/150 (55%), Positives = 115/150 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++ V++ G+ ++DRTG GT S FG+QMRF+L  GFPL+TTK+ + K+++HELL
Sbjct: 1   MQQYLALMKKVLEEGTTKKDRTGTGTLSIFGHQMRFNLQNGFPLVTTKRCYTKAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + V+IW+EW D+ G+LGP+YG QWRSW   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIAYLKENDVTIWNEWVDEQGDLGPVYGKQWRSWGTADGRHIDQLDLLVNEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLF 150
            +P SRR +VSAWNV  +DKMAL PCH  F
Sbjct: 121 KNPDSRRLVVSAWNVGELDKMALAPCHAFF 150


>gi|269798443|ref|YP_003312343.1| thymidylate synthase [Veillonella parvula DSM 2008]
 gi|269095072|gb|ACZ25063.1| thymidylate synthase [Veillonella parvula DSM 2008]
          Length = 263

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 103/265 (38%), Positives = 152/265 (57%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+  ++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  +D MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239
           + L  M+A V G + G+F H + + H+Y NH +    QL+R  + L  P++I+NP + D 
Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLARRNQALPAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V+V
Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263


>gi|237802256|ref|ZP_04590717.1| thymidylate synthase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025113|gb|EGI05169.1| thymidylate synthase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 323

 Score =  196 bits (498), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG SN +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+   P       ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323


>gi|312897560|ref|ZP_07756980.1| thymidylate synthase [Megasphaera micronuciformis F0359]
 gi|310621412|gb|EFQ04952.1| thymidylate synthase [Megasphaera micronuciformis F0359]
          Length = 267

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 102/266 (38%), Positives = 152/266 (57%), Gaps = 11/266 (4%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+++ ++++ G   ++RTG+ T       M+FDL K FP+LTTK V +K+ V ELLW
Sbjct: 10  EQYLNIVENILEHGYFDQNRTGIRTYKLPHQMMQFDLEKEFPILTTKFVAFKTAVKELLW 69

Query: 62  FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
             +  SN V  L +    +WDEW  +DG +G  YG Q R +         Q+ +++  LR
Sbjct: 70  IWQLQSNDVRELQKMNCHVWDEWMREDGTIGKAYGYQIRKY--------KQVDTLLDQLR 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP +RR IVS WN+  +  MAL PC     + V +G+L+C L QRSGD+ LGIPFN+  
Sbjct: 122 TDPQNRRMIVSLWNIEDLPDMALQPCAYQTLWDVSDGRLNCMLVQRSGDMGLGIPFNMTQ 181

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVD 238
           Y++L  ++A  +G + G F H + + H+Y NH E    QL+R    L  PQ++I+  I D
Sbjct: 182 YAVLVHLIARSVGLRPGLFTHVINNAHIYENHVEALKTQLARRREALPAPQLVIDEGITD 241

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
              FR E+  L  Y     +  +V+V
Sbjct: 242 FYEFRPENIRLEGYTHKGKLPMEVAV 267


>gi|330987229|gb|EGH85332.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 323

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEGGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+   P       ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323


>gi|258646536|ref|ZP_05734005.1| thymidylate synthase [Dialister invisus DSM 15470]
 gi|260403948|gb|EEW97495.1| thymidylate synthase [Dialister invisus DSM 15470]
          Length = 264

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/266 (39%), Positives = 156/266 (58%), Gaps = 12/266 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++++++  GS   +RTG+         M+FDL K FP+LTTK V +K+ V E+LW 
Sbjct: 7   QYLGIIKNILDAGSLGDNRTGMPAYKLPHQIMQFDLEKEFPILTTKFVAFKTSVKEILWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L +    +WDEW  +DG +G  YG Q   +         Q+ +++++L+ 
Sbjct: 67  WQKQSNDVRLLQQWNCHVWDEWMQEDGTIGKAYGYQLGKY--------HQVDTLLETLKK 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIAS 180
           DP SRR +V  WNV  +  MAL PC  L  + V D+G+L+C L QRSGD+ LG+PFN+A 
Sbjct: 119 DPQSRRMVVDLWNVKDLPDMALYPCAFLTMWDVSDDGRLNCMLVQRSGDMGLGVPFNMAQ 178

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVD 238
           Y+ L  M+A V G + G F H + + H+Y NH +    QL+R P+    P + +NP++ D
Sbjct: 179 YAALVHMIAQVSGLRVGLFTHVINNAHVYRNHVDAMKTQLARLPKAYDAPVLKLNPDVHD 238

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
              F+ ED  L +Y+ H  I  +VSV
Sbjct: 239 FYDFKPEDIVLENYKHHEKIAMEVSV 264


>gi|71735199|ref|YP_276964.1| thymidylate synthase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257483848|ref|ZP_05637889.1| thymidylate synthase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289624869|ref|ZP_06457823.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289650714|ref|ZP_06482057.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|289672056|ref|ZP_06492946.1| thymidylate synthase [Pseudomonas syringae pv. syringae FF5]
 gi|298489271|ref|ZP_07007288.1| Thymidylate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|71555752|gb|AAZ34963.1| thymidylate synthase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298156235|gb|EFH97338.1| Thymidylate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320326279|gb|EFW82332.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. B076]
 gi|320331721|gb|EFW87659.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330869197|gb|EGH03906.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330872473|gb|EGH06622.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330940592|gb|EGH43640.1| thymidylate synthase [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330982261|gb|EGH80364.1| thymidylate synthase [Pseudomonas syringae pv. aptata str. DSM
           50252]
 gi|331012059|gb|EGH92115.1| thymidylate synthase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 323

 Score =  195 bits (495), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+   P       ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323


>gi|66048064|ref|YP_237905.1| thymidylate synthase [Pseudomonas syringae pv. syringae B728a]
 gi|63258771|gb|AAY39867.1| Thymidylate synthase [Pseudomonas syringae pv. syringae B728a]
          Length = 323

 Score =  195 bits (495), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+   P       ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLGL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323


>gi|313501116|gb|ADR62482.1| ThyA [Pseudomonas putida BIRD-1]
          Length = 323

 Score =  195 bits (495), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI  G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLRG  N       G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  +   + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + QL R P   P+++I+   P+  +   +  E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPSFAETGKYEPEWLEK 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF L  YE HA + A ++V
Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323


>gi|167036181|ref|YP_001671412.1| thymidylate synthase [Pseudomonas putida GB-1]
 gi|166862669|gb|ABZ01077.1| Thymidylate synthase [Pseudomonas putida GB-1]
          Length = 323

 Score =  195 bits (495), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 164/323 (50%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI+ G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIENGTMQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLRG  N       G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNSAAIEMAEKAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  +   + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +    QL R P   P+++I+   P   +   +  E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLHEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF L  YE HA + A ++V
Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323


>gi|330954749|gb|EGH55009.1| thymidylate synthase [Pseudomonas syringae Cit 7]
          Length = 323

 Score =  194 bits (494), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+   P       ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMNREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323


>gi|322368138|ref|ZP_08042707.1| thymidylate synthase [Haladaptatus paucihalophilus DX253]
 gi|320552154|gb|EFW93799.1| thymidylate synthase [Haladaptatus paucihalophilus DX253]
          Length = 330

 Score =  194 bits (494), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 165/332 (49%), Gaps = 72/332 (21%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYL L+  V++ G+ + +RTGV T STF      DL +G+PLLTTKK+    W S++H
Sbjct: 1   MKQYLGLVEDVLRDGTYKPNRTGVDTISTFSQHYEVDLREGYPLLTTKKMDGFRWDSMLH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR------------SWPDYD 105
           ELLW+L G+ ++  L R    IW+EWAD+DG L   YG  WR            SWP+ D
Sbjct: 61  ELLWYLSGEEHIRNL-REKTGIWNEWADEDGTLDTAYGRFWRRFPVPEEGLPGESWPEAD 119

Query: 106 ------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159
                     DQI  ++  L  +P SRR +VSAW+ A      LPPCH  F   V    L
Sbjct: 120 HRWMNEDGTFDQIQYLIDGLDENPNSRRFVVSAWHPANAAVSTLPPCHYTFVVNVQGDTL 179

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-- 217
           +  L QRSGDV LGIPFN+A+Y+LL  +LA   GF+ G+F HT+ D H+Y    ++ +  
Sbjct: 180 NLHLTQRSGDVALGIPFNVAAYALLATVLARQTGFEVGKFAHTIVDAHVYCGEGDRGEWY 239

Query: 218 ----------------------------------------------LQLSRSPRTLPQMI 231
                                                          QLSR+P++ P++ 
Sbjct: 240 RDNLEDLQTRLADVTQKSEYEEVREWLESEAPEEETEAMDHVPGLLTQLSRTPKSRPEIE 299

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           +  + +D L+  Y+D  LR Y+ H  I   V+
Sbjct: 300 VAADSIDELT--YDDIVLREYDAHPGIKFSVA 329


>gi|302188010|ref|ZP_07264683.1| thymidylate synthase [Pseudomonas syringae pv. syringae 642]
          Length = 323

 Score =  194 bits (493), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 168/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISERVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H A+ A ++V
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323


>gi|28872394|ref|NP_795013.1| thymidylate synthase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|62901368|sp|Q87UL4|TYSY_PSESM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|28855649|gb|AAO58708.1| thymidylate synthase [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 323

 Score =  194 bits (493), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG SN +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   + ++  DP SRR +   WN
Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+   P       ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H A+ A ++V
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323


>gi|330961919|gb|EGH62179.1| thymidylate synthase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 322

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 170/322 (52%), Gaps = 59/322 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG SN +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + Q++R P ++P+++I+   P       ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYSMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVS 263
               DF+L  Y+ H A+ A ++
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMA 322


>gi|296330980|ref|ZP_06873455.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674499|ref|YP_003866171.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|317412153|sp|E0TVT6|TYSY1_BACPZ RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1;
           AltName: Full=Thymidylate synthase A; Short=TS A;
           Short=TSase A
 gi|296151985|gb|EFG92859.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412743|gb|ADM37862.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 279

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 100/247 (40%), Positives = 146/247 (59%), Gaps = 3/247 (1%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVS 78
           D T   T S    QMRFD S+  P+LTTKKV WK+ + ELLW  +  SN V+ L++ GV 
Sbjct: 34  DGTPAHTLSVISKQMRFDNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVH 92

Query: 79  IWDEWADKDGELGPIYGVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           IWD+W  +DG +G  YG Q  +   + +G  +DQ+  ++  L+ +P SRRHI   WN   
Sbjct: 93  IWDQWKQEDGTIGHAYGFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDE 152

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           +D MAL PC    Q+YV  GKL  ++  RS D+ LG PFN+  Y++L  M+A V G++ G
Sbjct: 153 LDSMALTPCVYETQWYVKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELG 212

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E+I  +GD H+Y  H +   +Q+ R     P++ INP + D   F  +DF L +Y+    
Sbjct: 213 EYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLFNYKHGDK 272

Query: 258 ILAKVSV 264
           +L +V+V
Sbjct: 273 LLFEVAV 279


>gi|26991817|ref|NP_747242.1| thymidylate synthase [Pseudomonas putida KT2440]
 gi|62901369|sp|Q88CN9|TYSY_PSEPK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|24986931|gb|AAN70706.1|AE016714_4 thymidylate synthase [Pseudomonas putida KT2440]
          Length = 323

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 164/323 (50%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI  G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLRG  N       G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  +   + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + QL R P   P+++I+   P   +   +  E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF L  YE HA + A ++V
Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323


>gi|136605|sp|P07606|TYSY_BPPHT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|215473|gb|AAA32353.1| thymidylate synthetase (EC 2.1.1.45) [Bacillus phage phi3T]
 gi|224477|prf||1106183A thymidylate synthetase
          Length = 279

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/274 (38%), Positives = 156/274 (56%), Gaps = 13/274 (4%)

Query: 3   QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
           QY  +++ +I  G SD           D T   T S    QMRFD S+  P+LTTKKV W
Sbjct: 7   QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMSKQMRFDNSE-VPILTTKKVAW 65

Query: 53  KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110
           K+ + ELLW  +  SN V+ L++ GV IWD+W  +DG +G  YG Q  +     +G  +D
Sbjct: 66  KTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVD 125

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           Q+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV  GKL  ++  RS D+
Sbjct: 126 QVDYLLHQLKNNPSSRRHITMLWNPDDLDAMALTPCVYETQWYVKQGKLHLEVRARSNDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P++
Sbjct: 186 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPEL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            INP + D  +F  +DF L +Y+    +L +V+V
Sbjct: 246 WINPEVKDFYNFTVDDFKLINYKHGDKLLFEVAV 279


>gi|213971428|ref|ZP_03399541.1| thymidylate synthase [Pseudomonas syringae pv. tomato T1]
 gi|301382144|ref|ZP_07230562.1| thymidylate synthase [Pseudomonas syringae pv. tomato Max13]
 gi|302060081|ref|ZP_07251622.1| thymidylate synthase [Pseudomonas syringae pv. tomato K40]
 gi|302132390|ref|ZP_07258380.1| thymidylate synthase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213923789|gb|EEB57371.1| thymidylate synthase [Pseudomonas syringae pv. tomato T1]
          Length = 323

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 169/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG SN +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   + ++  DP SRR +   WN
Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFARTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H A+ A ++V
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323


>gi|29337127|sp|Q9ANR7|TYSY_BACMO RecName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A
 gi|12958589|gb|AAK09364.1|AF321518_1 thymidylate synthase [Bacillus mojavensis]
          Length = 279

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/274 (38%), Positives = 156/274 (56%), Gaps = 13/274 (4%)

Query: 3   QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
           QY  +++ +IK G SD           D T   T S    QMRFD S+  P+LTTKKV W
Sbjct: 7   QYNSIIKEIIKNGISDEEFDVRTKWESDGTPAHTLSIITKQMRFDNSE-VPILTTKKVAW 65

Query: 53  KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110
           K+ + ELLW  +  SN V+ L++ GV IWD+W  +DG +G  YG Q  +   + +G  +D
Sbjct: 66  KTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGSIGHAYGFQLAKKNRNLNGEKVD 125

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           Q+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV  GKL  ++  RS D+
Sbjct: 126 QVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQWYVKQGKLHLEVRARSNDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P++
Sbjct: 186 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPKL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            INP + D   F  +DF L +Y+    +  +V+V
Sbjct: 246 WINPEVKDFYDFTIDDFKLINYKHGDRLSFEVAV 279


>gi|294794647|ref|ZP_06759783.1| thymidylate synthase [Veillonella sp. 3_1_44]
 gi|294454977|gb|EFG23350.1| thymidylate synthase [Veillonella sp. 3_1_44]
          Length = 263

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 151/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+  ++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  ++ MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239
           + L  M+  V G + G+F H + + H+Y NH +    QL+R  + L  P++I+NP + D 
Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARREQALPAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V+V
Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263


>gi|330874141|gb|EGH08290.1| thymidylate synthase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 323

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAQFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQPFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+   P       ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H A+ A ++V
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323


>gi|330972999|gb|EGH73065.1| thymidylate synthase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 323

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 170/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE---- 245
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+   P       ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H A+ A ++V
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323


>gi|282849967|ref|ZP_06259350.1| thymidylate synthase [Veillonella parvula ATCC 17745]
 gi|282580404|gb|EFB85804.1| thymidylate synthase [Veillonella parvula ATCC 17745]
          Length = 263

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 151/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+  ++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  ++ MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239
           + L  M+  V G + G+F H + + H+Y NH +    QL+R  + L  P++I+NP + D 
Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARRDQALPAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V+V
Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263


>gi|294792888|ref|ZP_06758035.1| thymidylate synthase [Veillonella sp. 6_1_27]
 gi|294456787|gb|EFG25150.1| thymidylate synthase [Veillonella sp. 6_1_27]
          Length = 263

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+  ++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  ++ MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239
           + L  M+  V G + G+F H + + H+Y NH +    QL+R  + L  P++I+NP + D 
Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARREQALPAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V++
Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAI 263


>gi|221117830|ref|XP_002168778.1| PREDICTED: similar to thymidylate synthase, partial [Hydra
           magnipapillata]
          Length = 197

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/241 (42%), Positives = 132/241 (54%), Gaps = 44/241 (18%)

Query: 24  VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83
            GT S FG QMRF+L + FPLLTTK+V WK VV ELLWF+ G ++ + L + GV IW+  
Sbjct: 1   TGTLSIFGGQMRFNLRESFPLLTTKRVFWKGVVEELLWFISGSTDGNILAQKGVQIWNS- 59

Query: 84  ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
                                                      R  +   N+ L   MAL
Sbjct: 60  ----------------------------------------NGTREFLDKCNIPL---MAL 76

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           PPCH   QFYV NG+LSCQ+YQRS D+ LGIPFNIASYSLLT ++A V   + G+FIHTL
Sbjct: 77  PPCHSFCQFYVANGELSCQMYQRSCDMGLGIPFNIASYSLLTYIIAHVCNLKPGDFIHTL 136

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           GD H+YNNH      Q+ RSPR  P++ I   + ++  F+ +DF L  Y PH  I   ++
Sbjct: 137 GDAHVYNNHVSALKEQIGRSPRPFPKLNIKRKVENIDDFKSDDFELIGYNPHQKIKMAMA 196

Query: 264 V 264
           V
Sbjct: 197 V 197


>gi|328912174|gb|AEB63770.1| Thymidylate synthase 1 [Bacillus amyloliquefaciens LL3]
          Length = 279

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 99/247 (40%), Positives = 146/247 (59%), Gaps = 3/247 (1%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVS 78
           D T   T S    QMRFD S+  P+LTTKKV WK+ + ELLW  +  SN V+ L++ GV 
Sbjct: 34  DGTPAHTLSVISKQMRFDNSE-IPILTTKKVAWKTAIKELLWIWQCKSNDVNELNKMGVH 92

Query: 79  IWDEWADKDGELGPIYGVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           IWD+W  +DG +G  YG Q  +     +G  +DQ+  ++  L+ +P SRRHI + WN   
Sbjct: 93  IWDQWKQEDGTIGKAYGYQLGKKNRMLNGEKVDQVDYLIHQLKNNPSSRRHITTLWNPDE 152

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           +D MAL PC    Q+ V  GKL  +++ RS D+ LG PFN+  Y++L  M+A V G++ G
Sbjct: 153 LDSMALTPCVYGTQWLVKGGKLHLEVFCRSNDLALGNPFNVFQYNVLQRMIAQVTGYELG 212

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E+I  +GD H+Y  H +   +Q+ R     P++ INPN+ D   F  +DF L +Y+    
Sbjct: 213 EYIFNIGDCHVYTRHIDNLKIQMDREQYEAPELWINPNVKDFYDFTIDDFKLINYKHGDK 272

Query: 258 ILAKVSV 264
           +  +V+V
Sbjct: 273 LYFEVAV 279


>gi|326536377|ref|YP_004300818.1| Td thymidylate synthase [Acinetobacter phage 133]
 gi|299483458|gb|ADJ19552.1| Td thymidylate synthase [Acinetobacter phage 133]
          Length = 315

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/315 (38%), Positives = 166/315 (52%), Gaps = 51/315 (16%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M  YLDL+R+V+  G D  D RTGVGT + FG Q++ DL KGFP +TTK++ +KSV  E+
Sbjct: 1   MKSYLDLMRNVLDNGEDVDDERTGVGTIALFGEQLKIDLRKGFPAVTTKRLAFKSVTAEM 60

Query: 60  LWFLRGDSNVSYLH--RHGVS---------IWD----EWADKD-----GELGPIYGVQWR 99
           LWFLRG +++  L    HG S         IWD    + A+K+     G +GP+YG  WR
Sbjct: 61  LWFLRGSNDLFELRAITHGESARYDADKKTIWDANYYQQAEKELGYTAGYMGPVYGNVWR 120

Query: 100 -----------------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI---- 138
                            S+ +Y+    DQI +++     +P SRR +  AW+   +    
Sbjct: 121 EFGQGTIRIERGDTKVESYDEYEVTGFDQIKAVLNEAIKNPGSRRLLTLAWDPKSVWGHD 180

Query: 139 ------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
                 DK  LPPCH  FQ  ++NG +      RS DVFLG PF+IASY+ L  +   ++
Sbjct: 181 DKYVKQDKPTLPPCHYGFQININNGHIDLLFLMRSVDVFLGKPFDIASYAELCHVFGRIL 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR---YEDFTL 249
           G      I   G+VH+Y NH +Q   QLSR P+ LP + INP +  L  F     +DF L
Sbjct: 241 GKTPRYLIGQFGNVHIYKNHIDQCLEQLSREPKKLPTLWINPELKTLDDFEKATVDDFKL 300

Query: 250 RSYEPHAAILAKVSV 264
             YE H  I A ++V
Sbjct: 301 IGYESHPNIKADMAV 315


>gi|62901136|sp|Q5D189|TYSY_BACNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|60280529|gb|AAX18246.1| thymidylate synthase A [Bacillus subtilis subsp. natto]
 gi|291484369|dbj|BAI85444.1| thymidylate synthase [Bacillus subtilis subsp. natto BEST195]
          Length = 279

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 105/274 (38%), Positives = 157/274 (57%), Gaps = 13/274 (4%)

Query: 3   QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
           QY  +++ +I  G SD           D T   T S    QMRFD S+  P+LTTKKV W
Sbjct: 7   QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMSKQMRFDNSE-VPILTTKKVAW 65

Query: 53  KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110
           K+ + ELLW  +  SN V+ L++ GV IWD+W  +DG +G  YG Q  +     +G  +D
Sbjct: 66  KTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVD 125

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           Q+  ++  L+ +P SRRHI   WN   +D M+L PC    Q+YV +GKL  ++  RS D+
Sbjct: 126 QVDYLLHQLKNNPSSRRHITMLWNPDDLDAMSLTPCVYETQWYVKHGKLHLEVRARSNDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P++
Sbjct: 186 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPEL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            INP + D  +F  +DF L +Y+    +L +V+V
Sbjct: 246 WINPEVKDFYNFTIDDFKLINYKHGDKLLFEVAV 279


>gi|321311405|ref|YP_004203692.1| thymidylate synthase [Bacillus subtilis BSn5]
 gi|320017679|gb|ADV92665.1| thymidylate synthase [Bacillus subtilis BSn5]
          Length = 279

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 105/274 (38%), Positives = 156/274 (56%), Gaps = 13/274 (4%)

Query: 3   QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
           QY  +++ +I  G SD           D T   T S    QMRFD S+  P+LTTKKV W
Sbjct: 7   QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVAW 65

Query: 53  KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110
           K+ + ELLW  +  SN V+ L++ GV IWD+W  +DG +G  YG Q  +     +G  +D
Sbjct: 66  KTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVD 125

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           Q+  ++  L+ +P SRRHI   WN   +D M+L PC    Q+YV  GKL  ++  RS D+
Sbjct: 126 QVDYLLHQLKNNPSSRRHITMLWNPDDLDAMSLTPCVYETQWYVKQGKLHLEVRARSNDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P++
Sbjct: 186 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPEL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            INP + D  +F  +DF L +Y+    +L +V+V
Sbjct: 246 WINPEVKDFYNFTIDDFKLINYKHGDKLLFEVAV 279


>gi|16078831|ref|NP_389651.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309650|ref|ZP_03591497.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221313972|ref|ZP_03595777.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221318895|ref|ZP_03600189.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221323168|ref|ZP_03604462.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|317412154|sp|P0CI79|TYSY1_BACSU RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1;
           AltName: Full=Thymidylate synthase A; Short=TS A;
           Short=TSase A
 gi|4699624|pdb|1B02|A Chain A, Crystal Structure Of Thymidylate Synthase A From Bacillus
           Subtilis
 gi|607048|emb|CAA55307.1| thymidylate synthetase [Bacillus subtilis]
 gi|2634152|emb|CAB13652.1| thymidylate synthase A [Bacillus subtilis subsp. subtilis str. 168]
          Length = 279

 Score =  191 bits (486), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 106/274 (38%), Positives = 155/274 (56%), Gaps = 13/274 (4%)

Query: 3   QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
           QY  +++ +I  G SD           D T   T S    QMRFD S+  P+LTTKKV W
Sbjct: 7   QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVAW 65

Query: 53  KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110
           K+ + ELLW  +  SN V+ L+  GV IWD+W  +DG +G  YG Q  +     +G  +D
Sbjct: 66  KTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVD 125

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           Q+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV +GKL  ++  RS D+
Sbjct: 126 QVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P++
Sbjct: 186 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPEL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            INP + D   F  +DF L +Y+    +L +V+V
Sbjct: 246 WINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 279


>gi|167522878|ref|XP_001745776.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775577|gb|EDQ89200.1| predicted protein [Monosiga brevicollis MX1]
          Length = 398

 Score =  191 bits (486), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 102/244 (41%), Positives = 140/244 (57%), Gaps = 45/244 (18%)

Query: 66  DSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------PDYD 105
           ++N + L    V IWD    KD            G+LGP+YG QWR +         DY 
Sbjct: 33  NTNANDLAARDVHIWDANGSKDFLEKQGLGHREEGDLGPVYGFQWRHFGAEYKDMHTDYS 92

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQ++ +++ ++ +P SRR I+SAWN   I KMALPPCH + QFYV +G+LSCQLYQ
Sbjct: 93  GQGVDQLAEVIEQIKTNPDSRRIIMSAWNPLDIPKMALPPCHTMCQFYVCDGELSCQLYQ 152

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH +  + QL R PR
Sbjct: 153 RSADMGLGVPFNIASYALLTYMIAQVTGLKPGDFVHTIGDAHVYLNHVDALEEQLKREPR 212

Query: 226 TLP----------------QMIINP----NIVDLLS-----FRYEDFTLRSYEPHAAILA 260
             P                Q + NP        LLS     F++EDF L+ Y+PH  I  
Sbjct: 213 PFPTLSFKRDIEEYVHAFGQHVTNPLEHRPTAALLSLGIDDFKFEDFDLQGYKPHNRIAM 272

Query: 261 KVSV 264
            +++
Sbjct: 273 DMAM 276


>gi|4388862|pdb|1BKO|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4388863|pdb|1BKO|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4388864|pdb|1BKO|C Chain C, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4388865|pdb|1BKO|D Chain D, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4388866|pdb|1BKP|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4388867|pdb|1BKP|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4389238|pdb|1BSF|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4389239|pdb|1BSF|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4558131|pdb|1BSP|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4558132|pdb|1BSP|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis
          Length = 278

 Score =  191 bits (486), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/274 (38%), Positives = 155/274 (56%), Gaps = 13/274 (4%)

Query: 3   QYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
           QY  +++ +I  G SD           D T   T S    QMRFD S+  P+LTTKKV W
Sbjct: 6   QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVAW 64

Query: 53  KSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVID 110
           K+ + ELLW  +  SN V+ L+  GV IWD+W  +DG +G  YG Q  +     +G  +D
Sbjct: 65  KTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVD 124

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           Q+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV +GKL  ++  RS D+
Sbjct: 125 QVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDM 184

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P++
Sbjct: 185 ALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPEL 244

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            INP + D   F  +DF L +Y+    +L +V+V
Sbjct: 245 WINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 278


>gi|300312740|ref|YP_003776832.1| thymidylate synthetase [Herbaspirillum seropedicae SmR1]
 gi|300075525|gb|ADJ64924.1| thymidylate synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 323

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 172/323 (53%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ V++ GS + +RTG+ T S  G  MRFDL KGFP +TTK++ +KSVV EL 
Sbjct: 1   MKQYQDLIQDVLENGSWQDNRTGIRTLSIPGAMMRFDLQKGFPAVTTKRLAFKSVVGELC 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD+ A+++ +            LGP+YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDQNANENADWLANPFRSGADDLGPVYGVQWRQWPAYKLID 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  +G         +DQ+   + ++  +P SRR +   WN
Sbjct: 121 AAHTTQIEAARSKGFAIVSSLQDEGVEKVLLYKAVDQLRECLDTIVNNPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +   G++S  LY RS D+ LG PFN+A  + L  ++A + 
Sbjct: 181 CAVLDEVALPACHLLYQFLPNQSTGEISLCLYVRSNDIGLGTPFNLAEGAALLHLVARLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245
           G++   F + +GD H+Y NH +    QL+R+P  LPQ+ I   + +   + RYE      
Sbjct: 241 GYKPRWFSYFVGDAHIYENHIDMVKEQLTRAPYPLPQLEIADRVPEFARTGRYEPQWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L +Y+ HA + A ++V
Sbjct: 301 VEPSDFSLVNYQHHAPLTAPMAV 323


>gi|303228494|ref|ZP_07315325.1| thymidylate synthase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516852|gb|EFL58763.1| thymidylate synthase [Veillonella atypica ACS-134-V-Col7a]
          Length = 263

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 151/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLNIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+ +++++++ 
Sbjct: 67  WQMQSNDVRKLQDMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  +  MAL PC     + V NG L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLPDMALQPCAYETLWDVGNGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239
           + L  M+A V G + G+F H + + H+Y NH +    QLSR  + L  P++ +N +I D 
Sbjct: 179 AALLCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLSRRDQALRAPKIRVNSDITDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L  YE    +   V+V
Sbjct: 239 YEFSPDDIVLEGYEHLGKLAMTVAV 263


>gi|313892103|ref|ZP_07825699.1| thymidylate synthase [Dialister microaerophilus UPII 345-E]
 gi|313119495|gb|EFR42691.1| thymidylate synthase [Dialister microaerophilus UPII 345-E]
          Length = 263

 Score =  190 bits (483), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/266 (37%), Positives = 156/266 (58%), Gaps = 12/266 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL +++++++ GS   +RTG+         M+FDL K FP+LTTK V +K+ + E+LW 
Sbjct: 6   QYLGIVKNILENGSLGNNRTGMPAYKLPHQIMQFDLEKEFPILTTKFVAFKTSIKEILWI 65

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L +    IWDEW  KDG +G  YG Q + +         Q+ +++  L+ 
Sbjct: 66  WQKQSNDVRELQKWNCHIWDEWMLKDGTIGKAYGYQLKEY--------KQVDTLLDLLKN 117

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +P SRR +V  WNV  + +MAL PC  L  + V  +G+L+C L QRSGD+ LG+PFN+A 
Sbjct: 118 NPESRRMVVDLWNVKDLPEMALYPCAFLTMWDVTSDGRLNCMLVQRSGDMGLGVPFNMAQ 177

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVD 238
           Y+ LT M+A V G + G F H + + H+Y NH E   +QL+R       P++++N ++ +
Sbjct: 178 YAALTHMIAQVSGLKAGLFTHVINNAHIYQNHVEALKVQLARLDEAYEAPKIVLNKDVKN 237

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
              F+ ED  L +Y+ H  +   VSV
Sbjct: 238 FYDFKPEDIVLENYKHHGKLPMAVSV 263


>gi|328553060|gb|AEB23552.1| thymidylate synthase [Bacillus amyloliquefaciens TA208]
          Length = 279

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/247 (39%), Positives = 146/247 (59%), Gaps = 3/247 (1%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVS 78
           D T   T S    QMRFD S+  P+LTTKKV WK+ + ELLW  +  SN V+ L++ GV 
Sbjct: 34  DGTPAHTLSVISKQMRFDNSE-VPILTTKKVAWKTAIRELLWIWQLKSNDVNELNKMGVH 92

Query: 79  IWDEWADKDGELGPIYGVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           IWD+W  +DG +G  YG Q  +     +G  +DQ+  ++  L+ +P SRRHI + WN   
Sbjct: 93  IWDQWKQEDGTIGKAYGYQLGKKNRMLNGEKVDQVDYLIHQLKNNPSSRRHITTLWNPDE 152

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           +D MAL PC    Q+ +  GKL  +++ RS D+ LG PFN+  Y++L  M+A V G++ G
Sbjct: 153 LDSMALTPCVYGTQWLIKGGKLHLEVFCRSSDLALGNPFNVFQYNVLQRMIAQVTGYELG 212

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E+I  +GD H+Y  H +   +Q+ R     P++ INP++ D   F  +DF L +Y+    
Sbjct: 213 EYIFNIGDCHVYTRHIDNLKIQMDREQHEAPELWINPDVKDFYDFTIDDFKLINYKHGDK 272

Query: 258 ILAKVSV 264
           +  +V+V
Sbjct: 273 LYFEVAV 279


>gi|303231865|ref|ZP_07318576.1| thymidylate synthase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513472|gb|EFL55503.1| thymidylate synthase [Veillonella atypica ACS-049-V-Sch6]
          Length = 263

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 150/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLNIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+ +++++++ 
Sbjct: 67  WQMQSNDVRKLQDMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  +  MAL PC     + V NG L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLPDMALQPCAYETLWDVGNGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239
           + L  M+A V G + G+F H + + H+Y NH +    QLSR  + L  P++ +N  I D 
Sbjct: 179 AALLCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLSRRDQALPAPKISVNSQITDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L  YE    +   V+V
Sbjct: 239 YDFTPDDIVLEGYEHLGKLAMTVAV 263


>gi|329121533|ref|ZP_08250156.1| thymidylate synthase [Dialister micraerophilus DSM 19965]
 gi|327468832|gb|EGF14305.1| thymidylate synthase [Dialister micraerophilus DSM 19965]
          Length = 263

 Score =  189 bits (481), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 155/266 (58%), Gaps = 12/266 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL +++++++ GS   +RTG+         M+FDL K FP+LTTK V +K+ + E+LW 
Sbjct: 6   QYLGIVKNILENGSLGNNRTGMSAYKLPHQIMQFDLEKEFPILTTKFVAFKTSIKEILWI 65

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L +    IWDEW   DG +G  YG Q + +         Q+ +++  L+ 
Sbjct: 66  WQKQSNDVRELQKWNCHIWDEWMLNDGTIGKAYGYQLKEYK--------QVDTLLDLLKN 117

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +P SRR +V  WNV  + +MAL PC  L  + V  +G+L+C L QRSGD+ LG+PFN+A 
Sbjct: 118 NPESRRMVVDLWNVKDLPEMALYPCAFLTMWDVASDGRLNCMLVQRSGDMGLGVPFNMAQ 177

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVD 238
           Y+ LT M+A V G + G F H + + H+Y NH E   +QL+R       P++++N ++ +
Sbjct: 178 YAALTHMIAQVSGLKAGLFTHVINNAHIYQNHVEALKVQLARLDEAYEAPKIVLNKDVKN 237

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
              F+ ED  L +Y+ H  +   VSV
Sbjct: 238 FYDFKPEDIVLENYKHHGKLPMAVSV 263


>gi|34419266|ref|NP_899279.1| dTMP (thymidylate) synthase [Vibrio phage KVP40]
 gi|34332947|gb|AAQ64102.1| dTMP (thymidylate) synthase [Vibrio phage KVP40]
          Length = 300

 Score =  189 bits (479), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/299 (39%), Positives = 163/299 (54%), Gaps = 36/299 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL L   ++  G    +RTG  T S    ++R+DLSKGFPLLTTKK+  K++  ELL
Sbjct: 2   MKNYLQLCTEILNEGDFLENRTGTNTVSVISRELRWDLSKGFPLLTTKKMATKAIFGELL 61

Query: 61  WFLRGDSNVSYLHRH------GVSIW-------DEWADKDG------ELGPIYGVQWRS- 100
           WFL G   +S L ++         IW       +E A K G      +LG +YG  WR  
Sbjct: 62  WFLSGSGLISDLRKYTELSDEDFCIWQQNLDELNERAKKAGIVRNEDDLGYVYGKVWRKR 121

Query: 101 ---WPDYDGNVIDQISSI---VQSLRADPYS---RRHIVSAWNVALIDK-----MALPPC 146
                D +    DQI  +   + +++ DP     RR IV AW+     +     +ALPPC
Sbjct: 122 LSVTADKEVTEFDQIHQLLCDIAAVKEDPTQSAQRRMIVEAWDPYFHTESNSVDVALPPC 181

Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206
           H  FQ +V NGK+S +  QRS D FLG+PFNIASY+LL  +LA + G + GE I + GDV
Sbjct: 182 HYGFQVFVRNGKISLKWNQRSVDTFLGLPFNIASYALLVHILAQLTGLKVGELIFSGGDV 241

Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           H+Y +H  Q   QL R+PR LPQ+ +     +  LL+ R  DF +  Y+P+ A+  K+S
Sbjct: 242 HIYEDHIVQVLKQLRRTPRELPQIQLPEFDTLSQLLTKRASDFVVYDYDPYPALKGKMS 300


>gi|4103865|gb|AAD01867.1| thymidylate synthase [Enterococcus faecalis]
          Length = 153

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 82/153 (53%), Positives = 110/153 (71%)

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           ++++++ ++ +P SRR IVSAWN   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVF
Sbjct: 1   LANVIEMIKTNPDSRRLIVSAWNPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVF 60

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLT ++A   G + GEF+HTLGD HLY NH EQ   QLSR  R+ P ++
Sbjct: 61  LGVPFNIASYALLTHLIAHETGLEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLV 120

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +NP+   +  F  ED  +  Y+PH  I A ++V
Sbjct: 121 LNPDKASVFDFDMEDIKVEGYDPHPTIKAPIAV 153


>gi|289582635|ref|YP_003481101.1| thymidylate synthase [Natrialba magadii ATCC 43099]
 gi|289532188|gb|ADD06539.1| thymidylate synthase [Natrialba magadii ATCC 43099]
          Length = 342

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/344 (34%), Positives = 165/344 (47%), Gaps = 84/344 (24%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYLDL+   +  G+ + +RTGV T S+F      DL +G+PLLTTK++    W S++H
Sbjct: 1   MQQYLDLVDAALSEGAYKPNRTGVDTISSFSEHYEVDLQEGYPLLTTKQMDGYRWNSMLH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103
           E+ W+L G+ ++  L R    IWD WAD++G L   YG  WR              SWPD
Sbjct: 61  EVCWYLSGEEHIQDL-REETKIWDAWADEEGHLDTAYGRFWRRFPVPEEPAQLPGESWPD 119

Query: 104 Y-----------DGNV---IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
                       DG      DQ+  ++ +L   P SRR +V+AW+ A      LPPCH  
Sbjct: 120 ESHQWVTAEETADGETRRTFDQLQYVIDTLSDSPNSRRLVVNAWHPANAAVSTLPPCHYS 179

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           F F V   +L+C L QRSGD+ LGIPFNIA+Y+LLT ++A   GF+ G F HT+ D H+Y
Sbjct: 180 FVFNVQGDRLNCHLTQRSGDIALGIPFNIAAYALLTKLVAKQTGFEPGTFAHTVVDAHVY 239

Query: 210 NNHFEQ---------------ADL-----------------------------------Q 219
               ++               AD+                                   Q
Sbjct: 240 CGRGDRGEWYADNLEALQTRLADVEERTEYREIREWLESEAPAEADGDERLDHVPGLLEQ 299

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           LSR P   P + ++   +D LS  YED TLR YE H  +   V+
Sbjct: 300 LSREPLERPTLEVDAATIDDLS--YEDVTLREYESHDGLTFGVA 341


>gi|33594075|ref|NP_881719.1| putative thymidylate synthase [Bordetella pertussis Tohama I]
 gi|62901354|sp|Q7VUE3|TYSY_BORPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|33564149|emb|CAE43421.1| putative thymidylate synthase [Bordetella pertussis Tohama I]
 gi|332383492|gb|AEE68339.1| thymidylate synthase [Bordetella pertussis CS]
          Length = 323

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 168/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G+ + +RTGV T S  G  +RFDL +GFP +TTKK+ +KS + E++
Sbjct: 1   MKQYLDLVQSILDQGAWQENRTGVRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD+ A+++ +            LGP+YGVQWR WP Y    
Sbjct: 61  GFLRATRSAAQFRALGCKVWDQNANENEQWLANPYREGPDDLGPVYGVQWRHWPAYKLLP 120

Query: 105 ---------------------DGN---------VIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D N          +DQ+   + ++R  P  RR +   WN
Sbjct: 121 SSAGGQVADALARGYRQVAEVDENGAPHVLLYKAVDQLRQCLDTIRQSPGDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF  + G  ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNAGTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE------ 245
           G++   F + +GD H+Y NH      QL+R P   PQ++++  I D  ++ +YE      
Sbjct: 241 GYKPRWFSYFIGDAHVYENHLPMLREQLAREPYPAPQLVLSDRIPDFAVTGKYEPQWLEQ 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ HA + A ++V
Sbjct: 301 VEPGDFTLSGYQHHAPLTAPMAV 323


>gi|4378161|gb|AAD19406.1| thymidylate synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 261

 Score =  188 bits (477), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 98/235 (41%), Positives = 135/235 (57%), Gaps = 41/235 (17%)

Query: 34  MRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW--------- 83
           MRFDLSKG  P+LTTKKV ++  + E+LWFL GD+N+  L   GVSIW +W         
Sbjct: 2   MRFDLSKGRIPILTTKKVSYRLAIREMLWFLSGDTNIRPLVEQGVSIWSDWPLARYQAET 61

Query: 84  -------------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124
                              A K G+LGP+YG QWR W   DG V DQI++++++L+++P 
Sbjct: 62  GALLSKKEFEAKILADTEFAKKWGDLGPVYGRQWRRWQGSDGQVYDQIATLIETLKSNPS 121

Query: 125 SRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
           SRR +   WNVA +  MALPPCH ++Q++V  +G+L+  LYQRS DVFLG  F       
Sbjct: 122 SRRMLFHGWNVAELKDMALPPCHMVYQYHVTSDGRLNSLLYQRSADVFLGAAFQFGRRGR 181

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ-----------ADLQLSRSPRTL 227
           L  MLA   G   G+ + T GDVH+Y NH +Q           + L+L+R P ++
Sbjct: 182 LQAMLADQAGLALGDLVWTGGDVHIYRNHIDQMKNSLPVTSGFSRLELTRHPNSI 236


>gi|311977889|ref|YP_003987009.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Acanthamoeba polyphaga mimivirus]
 gi|82000169|sp|Q5UQG3|DRTS_MIMIV RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|55417112|gb|AAV50762.1| thymidylate synthase [Acanthamoeba polyphaga mimivirus]
 gi|308204867|gb|ADO18668.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Acanthamoeba polyphaga mimivirus]
          Length = 563

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 167/292 (57%), Gaps = 34/292 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QY++L++ +++ G  ++ R  + T+S FGYQ+++DLSKG+P+ T K+ + K++  EL+W
Sbjct: 273 NQYIELVKTIMEKGIVKQTRNSI-TKSIFGYQLKYDLSKGYPIQTIKRSYPKAIFEELMW 331

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD-----------GELGPIYGVQWRSW--------P 102
            +RG ++VS L + GV +WD+ + KD           G++GP YG Q R W         
Sbjct: 332 MIRGQTDVSILQKKGVHVWDKNSSKDFLSKYNLPYEEGDIGPGYGFQMRYWGAEYTDCKT 391

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------- 155
            Y G  IDQ++  ++S++ +P+ RR +++ WN + +DKMAL PCH  + F VD       
Sbjct: 392 SYQGQGIDQLNKCIESIQNNPHDRRIMINLWNCSDLDKMALAPCHFCYMFGVDLYEVPTT 451

Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
               G+L+C L QRS DV LG  +N  + +LLT ++A+      G  +H++ D H+Y +H
Sbjct: 452 SGKKGRLNCHLVQRSWDVLLG--WNTTTAALLTYLIANHCDLDPGILVHSISDAHIYQSH 509

Query: 213 FEQADLQ--LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
            +   +   L R  R  P ++I      +  + ++D  + +Y P  +I A++
Sbjct: 510 IDSGAISQLLQRKCRKFPNLVIRNKKEKIDDYEFDDLIIENYYPCPSISAEM 561


>gi|319645637|ref|ZP_07999869.1| thymidylate synthase A [Bacillus sp. BT1B_CT2]
 gi|317392523|gb|EFV73318.1| thymidylate synthase A [Bacillus sp. BT1B_CT2]
          Length = 300

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/275 (37%), Positives = 156/275 (56%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ +I+ G SD           D T   T S    +MRFD S+  P+LTTKKV 
Sbjct: 27  QQYNAIIQKIIESGISDEEYQVRTKWDSDGTPAHTLSIMSEKMRFDNSE-VPILTTKKVA 85

Query: 52  WKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVI 109
           WK+ + ELLW  +  SN V  L+  GV IWD+W  +DG +G  YG Q  +     +G  +
Sbjct: 86  WKTAIKELLWIWQLKSNDVQVLNDMGVHIWDQWRLEDGTIGAAYGYQLGKKNRTVNGQKV 145

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRH+   WN   +D MAL PC    Q+YV  GKLS ++  RS D
Sbjct: 146 DQVDYLLHQLKHNPSSRRHLTMLWNPDDLDGMALTPCVYETQWYVKEGKLSLEVRARSND 205

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V+G++ GE+I  +GD H+Y  H +  ++Q+ R     P+
Sbjct: 206 MALGNPFNVFQYNVLQRMIAQVLGYELGEYIFNIGDCHIYTRHIDNLNIQMKREQYEAPK 265

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP+I +   F  +DF L  Y+    +  +V+V
Sbjct: 266 LWINPDIKNFYDFTIDDFKLIDYKHGDKLTFEVAV 300


>gi|294917252|ref|XP_002778435.1| dihydrofolate reductase/thymidilate synthase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239886828|gb|EER10230.1| dihydrofolate reductase/thymidilate synthase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 422

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/203 (47%), Positives = 132/203 (65%), Gaps = 23/203 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           ++YL L+  +I+ G D  DRTGVGT++ F   MRF L  G FPLLTTK+V W+ VV ELL
Sbjct: 207 YEYLRLIEEIIENGEDADDRTGVGTKTIFSCHMRFSLRDGVFPLLTTKRVFWRGVVEELL 266

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW-PDY--- 104
           WF+RGD+N  +L   GV IWD     E+ D       ++G+LGP+YG QWR +  DY   
Sbjct: 267 WFIRGDTNAKHLSDQGVKIWDLNGTREFLDGRGLTHREEGDLGPVYGFQWRHFGADYVDM 326

Query: 105 -----DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK- 158
                    +DQ++ +++ L+ +P  RR I++AWN   +  MALPPCH + QFYV++ + 
Sbjct: 327 HADYSQSGGVDQLAEVIRQLKENPMDRRIIMTAWNPTALPLMALPPCHMMCQFYVNSKQE 386

Query: 159 LSCQLYQRSGDVFLGIPFNIASY 181
           LSC +YQRS D+ LG+PFNIASY
Sbjct: 387 LSCAMYQRSADMGLGVPFNIASY 409


>gi|152980241|ref|YP_001352883.1| thymidylate synthase [Janthinobacterium sp. Marseille]
 gi|151280318|gb|ABR88728.1| thymidylate synthase [Janthinobacterium sp. Marseille]
          Length = 324

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 171/324 (52%), Gaps = 60/324 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHEL 59
           M QYLDL+R V+  G+ + +RTG+ T S  G  +RFDL K GFP +TTK++ +KSV+ EL
Sbjct: 1   MKQYLDLVRTVLDTGTWQENRTGIRTISIPGAMLRFDLQKDGFPAITTKRLAFKSVIGEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY--- 104
           + FLR   + +     G  +WD+ A+++ E            LGP+YGVQWR WP Y   
Sbjct: 61  IGFLRATRSAAEFRELGCKVWDQNANENTEWLNNPYRTGPDDLGPVYGVQWRQWPAYKLL 120

Query: 105 ------------------------DGN-------VIDQISSIVQSLRADPYSRRHIVSAW 133
                                   +G         IDQ+   + ++  +P SRR +   W
Sbjct: 121 DADQQAQIDDAQKRGFRVVSTVNDEGKDKVLLYKAIDQLRDCLDTIIKNPGSRRILFHGW 180

Query: 134 NVALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           N A +D +ALP CH L+QF  +    ++S  LY RS D+ LG PFN+A  + L  ++  +
Sbjct: 181 NCADLDAIALPACHLLYQFIPNATTKEISLCLYIRSNDIGLGTPFNLAEAAALLHVVGRL 240

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE----- 245
            G+    F + +GD H+Y NH +  + Q++R+P   PQ++++  I D  ++ +YE     
Sbjct: 241 TGYTPKWFTYFIGDAHIYENHLDMLNEQMTRAPHPAPQLVLSDRIPDFAVTGKYEPEWLE 300

Query: 246 -----DFTLRSYEPHAAILAKVSV 264
                DF+L +Y+ HA + A ++V
Sbjct: 301 KLEPGDFSLENYQHHAPLTAPMAV 324


>gi|52080405|ref|YP_079196.1| thymidylate synthase [Bacillus licheniformis ATCC 14580]
 gi|52785784|ref|YP_091613.1| thymidylate synthase [Bacillus licheniformis ATCC 14580]
 gi|3122985|sp|Q59212|TYSY_BACLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName:
           Full=Thymidylate synthase A; Short=TS A; Short=TSase A
 gi|62901267|sp|Q65J44|TYSY_BACLD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|1359509|emb|CAA90533.1| thymidylate synthetase [Bacillus licheniformis]
 gi|52003616|gb|AAU23558.1| thymidylate synthase A [Bacillus licheniformis ATCC 14580]
 gi|52348286|gb|AAU40920.1| ThyA [Bacillus licheniformis ATCC 14580]
          Length = 279

 Score =  187 bits (474), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/275 (37%), Positives = 156/275 (56%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFG-SDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ +I+ G SD           D T   T S    +MRFD S+  P+LTTKKV 
Sbjct: 6   QQYNAIIQKIIESGISDEEYQVRTKWDSDGTPAHTLSIMSEKMRFDNSE-VPILTTKKVA 64

Query: 52  WKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RSWPDYDGNVI 109
           WK+ + ELLW  +  SN V  L+  GV IWD+W  +DG +G  YG Q  +     +G  +
Sbjct: 65  WKTAIKELLWIWQLKSNDVQVLNDMGVHIWDQWRLEDGTIGAAYGYQLGKKNRTVNGQKV 124

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRH+   WN   +D MAL PC    Q+YV  GKLS ++  RS D
Sbjct: 125 DQVDYLLHQLKHNPSSRRHLTMLWNPDDLDGMALTPCVYETQWYVKEGKLSLEVRARSND 184

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V+G++ GE+I  +GD H+Y  H +  ++Q+ R     P+
Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVLGYELGEYIFNIGDCHIYTRHIDNLNIQMKREQYEAPK 244

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP+I +   F  +DF L  Y+    +  +V+V
Sbjct: 245 LWINPDIKNFYDFTIDDFKLIDYKHGDKLTFEVAV 279


>gi|257389045|ref|YP_003178818.1| thymidylate synthase [Halomicrobium mukohataei DSM 12286]
 gi|257171352|gb|ACV49111.1| thymidylate synthase [Halomicrobium mukohataei DSM 12286]
          Length = 334

 Score =  186 bits (473), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/232 (41%), Positives = 134/232 (57%), Gaps = 24/232 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYLDL+   ++ G+ + +RTGV T ++F      DL++GFPLLTTK +    W S++H
Sbjct: 1   MQQYLDLVDSTLRGGTYKPNRTGVDTVASFSQHYEVDLAEGFPLLTTKDLSGFRWNSLIH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103
           ELLW+L G+ ++  L R    IWD WAD++G L   YG  WR              SWPD
Sbjct: 61  ELLWYLSGEEHIREL-REETGIWDAWADEEGHLDTAYGRFWRRYPIPDDDARLPGESWPD 119

Query: 104 ------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
                  D    DQ++ ++  L  +P SRR +V+AW+ A      LPPCH  F F V  G
Sbjct: 120 DAHRWVNDDGTFDQLAYVIDQLEENPRSRRLVVNAWHPANATVSTLPPCHYTFVFNVQGG 179

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           +L+  L QRSGD+ LG+PFN+A+YSLL   +A    F+ G F HT+ D H+Y
Sbjct: 180 RLNVHLTQRSGDIALGVPFNVAAYSLLAQAVAQRTDFELGSFAHTIVDAHVY 231


>gi|326483245|gb|EGE07255.1| thymidylate synthase [Trichophyton equinum CBS 127.97]
          Length = 310

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/304 (38%), Positives = 152/304 (50%), Gaps = 74/304 (24%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 40  HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+   
Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPV--- 156

Query: 97  QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154
                                         R I+SAWN A + KMALPPCH   QFYV  
Sbjct: 157 ------------------------------RIILSAWNPADLKKMALPPCHMFAQFYVSF 186

Query: 155 ------DNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
                 D GK     LSC LYQRS D+ LG+PFNIASY+LLT M A       G FIHT+
Sbjct: 187 PPQKAGDEGKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPGTFIHTM 246

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPN---IVDLLSFRYEDFTLRSYEPHAAILA 260
           GD H+Y +H E    QL+R P   P + IN       ++  ++  DF +  Y+PH  I  
Sbjct: 247 GDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDYKPHKLIKM 306

Query: 261 KVSV 264
           K+S+
Sbjct: 307 KMSI 310


>gi|330891851|gb|EGH24512.1| thymidylate synthase [Pseudomonas syringae pv. mori str. 301020]
          Length = 298

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 155/287 (54%), Gaps = 48/287 (16%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + + 
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEF 287


>gi|2293408|gb|AAC26324.1| thymidylate synthase [Bacillus subtilis]
          Length = 231

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 94/232 (40%), Positives = 140/232 (60%), Gaps = 3/232 (1%)

Query: 35  RFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPI 93
           RFD S+  P+LTTKKV WK+ + ELLW  +  SN V+ L++ GV IWD+W  +DG +G  
Sbjct: 1   RFDNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHA 59

Query: 94  YGVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           YG Q  +   + +G  +DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+
Sbjct: 60  YGFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQW 119

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
           YV  GKL  ++  RS D+ LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H
Sbjct: 120 YVKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRH 179

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +   +Q+ R     P++ INP + D   F  +DF L +Y+    +L +V+V
Sbjct: 180 IDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 231


>gi|33595476|ref|NP_883119.1| putative thymidylate synthase [Bordetella parapertussis 12822]
 gi|33599861|ref|NP_887421.1| putative thymidylate synthase [Bordetella bronchiseptica RB50]
 gi|62901355|sp|Q7W1A9|TYSY_BORPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901356|sp|Q7WP13|TYSY_BORBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|33565554|emb|CAE40196.1| putative thymidylate synthase [Bordetella parapertussis]
 gi|33567458|emb|CAE31371.1| putative thymidylate synthase [Bordetella bronchiseptica RB50]
          Length = 323

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 167/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G+ + +RTGV T S  G  +RFDL +GFP +TTKK+ +KS + E++
Sbjct: 1   MKQYLDLVQSILDQGAWQENRTGVRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD+ A+++ +            LGP+YGVQWR WP Y    
Sbjct: 61  GFLRATRSAAQFRALGCKVWDQNANENEQWLANPYREGPDDLGPVYGVQWRHWPAYKLLP 120

Query: 106 ----GNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
               G V                           +DQ+   + ++   P  RR +   WN
Sbjct: 121 RSAGGQVADALARGYRQVAEVAENGAPHVLLYKAVDQLRQCLDTIHQSPGDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF  + G  ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNAGTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE------ 245
           G++   F + +GD H+Y NH      QL+R P   PQ++++  I D  ++ +YE      
Sbjct: 241 GYKPRWFSYFIGDAHVYENHLPMLREQLTREPYPAPQLVLSDRIPDFAVTGKYEPQWLEQ 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ HA + A ++V
Sbjct: 301 VEPGDFTLSGYQHHAPLTAPMAV 323


>gi|187935542|ref|YP_001887622.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B]
 gi|187723695|gb|ACD24916.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B]
          Length = 263

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 150/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL++ ++++  G    +RTG+ T       M+F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V IWDEW  +DG +G  YG   + +        DQI  ++ SL+ 
Sbjct: 67  FKDQSNDVKKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIHSLKN 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ W +  +D  AL PC  L  + V +G+L+C L QRSGD  LGIPFN + Y
Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGRLNCMLVQRSGDWPLGIPFNTSQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVDL 239
           ++LT ++A V G + G F H + + H+Y N  +    QL R  ++   P++ INP I D 
Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVINNAHIYENQIDGMKTQLERKDQSYDAPKLWINPEIKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L +Y+ H +I   VSV
Sbjct: 239 YDFTPDDIKLENYKHHESIKMPVSV 263


>gi|251781262|ref|ZP_04824178.1| thymidylate synthase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243081709|gb|EES47770.1| thymidylate synthase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 263

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 148/265 (55%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL++ ++++  G    +RTG+ T       M+F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V IWDEW  +DG +G  YG   + +        DQI  ++ SL+ 
Sbjct: 67  FKDQSNDVKKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIDSLKN 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ W +  +D  AL PC  L  + V +GKL+C L QRSGD  LGIPFN + Y
Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGKLNCMLVQRSGDWPLGIPFNTSQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVDL 239
           ++LT ++A V G + G F H + + H+Y N  +    QL R  +    P++ INP I D 
Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVINNAHIYENQIDGMKTQLERKDQAYDAPKLWINPEIKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L  Y+ H +I   VS+
Sbjct: 239 YDFTPDDIKLEDYKHHESIKMPVSI 263


>gi|313126201|ref|YP_004036471.1| thymidylate synthase [Halogeometricum borinquense DSM 11551]
 gi|312292566|gb|ADQ67026.1| thymidylate synthase [Halogeometricum borinquense DSM 11551]
          Length = 332

 Score =  185 bits (470), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 99/230 (43%), Positives = 132/230 (57%), Gaps = 22/230 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYLDL+  V+  G  + +RTGV T S F      DL +GFPLLTTK +    W S++H
Sbjct: 1   MRQYLDLVTDVLSNGQHKPNRTGVDTISAFSRHYEVDLQEGFPLLTTKDLSGFRWNSLIH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR------------SWPD-- 103
           E +W+L G+ ++  L R    IWD WAD++G L   YG  WR            +WP+  
Sbjct: 61  EFVWYLSGEEHIRTL-REETGIWDAWADEEGRLDTAYGRFWRRFPVPDEGLPGEAWPEDT 119

Query: 104 ----YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159
                D    DQI  ++ +LR +P SRR +V+AW+ A      LPPCH  F F V   KL
Sbjct: 120 HRWMNDEGTFDQIQYVLDTLRENPNSRRMVVNAWHPANAAVSTLPPCHYSFVFNVQGDKL 179

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           +  L QRSGD+ LGIPFNIA+Y+LL   +A   GF+ G+F HT+ D H+Y
Sbjct: 180 NLHLTQRSGDIALGIPFNIAAYALLATAVAQRTGFEVGKFAHTVVDAHVY 229


>gi|292657031|ref|YP_003536928.1| thymidylate synthase [Haloferax volcanii DS2]
 gi|291372732|gb|ADE04959.1| thymidylate synthase [Haloferax volcanii DS2]
          Length = 332

 Score =  185 bits (469), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/334 (35%), Positives = 163/334 (48%), Gaps = 74/334 (22%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYLDL+  V+  G  + +RTGV T S F      DL +GFPLLTTK +    W S++H
Sbjct: 1   MRQYLDLVTDVLGTGRHKPNRTGVDTISGFSKHYTVDLQEGFPLLTTKDLSGFRWNSLIH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR------------SWPD-- 103
           ELLW+L G+ ++  L R    IWD WAD++G L   YG  WR            +WPD  
Sbjct: 61  ELLWYLSGEEHIRTL-REETGIWDAWADEEGHLDTAYGRFWRRYPVPEEGLAGEAWPDDG 119

Query: 104 ----YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159
                D    DQ++ ++ +L  +P SRR +++AW+ A      LPPCH  F F V   +L
Sbjct: 120 HRWMNDEGTFDQLAYVLDTLDENPNSRRLVINAWHPANAAVSTLPPCHYTFVFNVQGDEL 179

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL----------Y 209
           +  L QRSGD+ LG+PFN+A+Y++L  ++A   GF+ G F HT+ D H+          Y
Sbjct: 180 NLHLTQRSGDIALGVPFNLAAYAILAQVVAQRAGFELGSFAHTIVDAHVYCGAGERGAWY 239

Query: 210 NNHF----------------------------EQAD------------LQLSRSPRTLPQ 229
            +H                             E+AD            LQ SR PR  P 
Sbjct: 240 GDHLDELQSRLADVQSPDEYLDVREWLLDAAPEEADGEEDYDHVPGLLLQASREPRERPA 299

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           + +    ++ LSF  ED  LR Y+P   I   V+
Sbjct: 300 LDVADVPLEDLSF--EDIVLRDYDPADGIRFAVA 331


>gi|218678176|ref|ZP_03526073.1| thymidylate synthase [Rhizobium etli CIAT 894]
          Length = 130

 Score =  184 bits (468), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 80/119 (67%), Positives = 102/119 (85%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLAHVMEKGSDRGDRTGTGTRSVFGYQMRFDLQEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           WFL+GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  +DQI+++V+ +
Sbjct: 61  WFLKGDTNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHVDQIANLVKGI 119


>gi|134094287|ref|YP_001099362.1| thymidylate synthase [Herminiimonas arsenicoxydans]
 gi|133738190|emb|CAL61235.1| thymidylate synthase (TS) (TSase) [Herminiimonas arsenicoxydans]
          Length = 324

 Score =  184 bits (468), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 170/324 (52%), Gaps = 60/324 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHEL 59
           M QYLDL+R V+  G+ + +RTG+ T S  G  +RFDL K GFP +TTK++ +KSV+ EL
Sbjct: 1   MKQYLDLVRTVLDSGTWQENRTGIRTISIPGAMLRFDLQKDGFPAITTKRLAFKSVIGEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY--- 104
           + FLR   + +     G  +WD+ A+++ E            LGP+YGVQWR WP Y   
Sbjct: 61  IGFLRASRSAAEFRALGCKVWDQNANENAEWLNNPYRLGEDDLGPVYGVQWRQWPAYKLL 120

Query: 105 ------------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAW 133
                                   +G         IDQ+   + ++  +P SRR +   W
Sbjct: 121 DADNKLQIQDAQKRGFRLISAVNDEGIDKVLMYKAIDQLRDCLDTIINNPASRRILFHGW 180

Query: 134 NVALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           N A +D +ALP CH L+QF  +    ++S  LY RS D+ LG PFN+A  + L  ++  +
Sbjct: 181 NCAELDAIALPACHLLYQFLPNQTTKEISLCLYIRSNDIGLGTPFNLAEAAALLHVVGRL 240

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE----- 245
            G+    F + +GD H+Y NH +  + Q++R P   P+++++  I D  ++ +YE     
Sbjct: 241 TGYTPKWFTYFIGDAHIYENHLDMLNEQMTREPYAAPRLVLSDRIPDYRVTGKYEPEWLE 300

Query: 246 -----DFTLRSYEPHAAILAKVSV 264
                DF+L +Y+ HA + A ++V
Sbjct: 301 KLEPGDFSLENYQHHAPLSAPMAV 324


>gi|293607661|ref|ZP_06689993.1| thymidylate synthase [Achromobacter piechaudii ATCC 43553]
 gi|292813946|gb|EFF73095.1| thymidylate synthase [Achromobacter piechaudii ATCC 43553]
          Length = 323

 Score =  184 bits (468), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  GS + +RTG+ T S  G  +RFDL KGFP +TTKK+ +KS + E++
Sbjct: 1   MKQYLDLVQSILDTGSWQENRTGIRTISMPGASLRFDLQKGFPAVTTKKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD+ A+++ +            LGP+YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRELGCKVWDQNANENSQWLANPYREGPDDLGPVYGVQWRQWPAYKLLD 120

Query: 105 ----------------------DGNV--------IDQISSIVQSLRADPYSRRHIVSAWN 134
                                 +G V        +DQ+   + ++   P  RR +   WN
Sbjct: 121 ASRPGQLEDALSRGYSKVADLEEGGVPKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF  +    ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE------ 245
           G+    F + +GD H+Y NH      QL+R P   P+++++  I D  ++ RYE      
Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTREPYESPRLVLSDRIPDFAVTGRYEPEWLEK 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y  HA + A ++V
Sbjct: 301 VEPSDFSLSGYTHHAPLTAPMAV 323


>gi|311108781|ref|YP_003981634.1| thymidylate synthase [Achromobacter xylosoxidans A8]
 gi|310763470|gb|ADP18919.1| thymidylate synthase [Achromobacter xylosoxidans A8]
          Length = 323

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 164/323 (50%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G+ + +RTG+ T S  G  +RFDL KGFP +TTKK+ +KS + E++
Sbjct: 1   MKQYLDLVQSILDTGAWQENRTGIRTLSMPGASLRFDLQKGFPAVTTKKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD+ A+++ +            LGP+YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRELGCKVWDQNANENSQWLANPYREGPDDLGPVYGVQWRQWPAYKMLD 120

Query: 105 ----------------------DGNV--------IDQISSIVQSLRADPYSRRHIVSAWN 134
                                 +G V        +DQ+   + ++   P  RR +   WN
Sbjct: 121 ASRPAQIADALSRGYAQVAELEEGGVPKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF  +    ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE------ 245
           G+    F + +GD H+Y NH      QL+R P   P ++++  I D  ++ RYE      
Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTREPYEAPTLVLSDRIPDFAVTGRYEPEWLEK 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y  HA + A ++V
Sbjct: 301 VEPGDFSLSGYTHHAPLTAAMAV 323


>gi|188590339|ref|YP_001922592.1| thymidylate synthase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500620|gb|ACD53756.1| thymidylate synthase [Clostridium botulinum E3 str. Alaska E43]
          Length = 263

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL++ ++++  G    +RTG+ T       M+F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V IWDEW  +DG +G  YG   + +        DQI  ++ SL+ 
Sbjct: 67  FKDQSNDVRKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIYSLKN 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ W +  +D  AL PC  L  + V +G+L+C L QRSGD  LGIPFN + Y
Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGRLNCMLVQRSGDWPLGIPFNTSQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVDL 239
           ++LT ++A V G + G F H + + H+Y N  +    QL R  +    P++ INP I D 
Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVVNNAHIYENQIDGMKTQLERKDQAYDAPKLWINPEIKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L +Y+ H +I   VSV
Sbjct: 239 YDFTPDDIKLENYKHHESIKMPVSV 263


>gi|163858352|ref|YP_001632650.1| thymidylate synthase [Bordetella petrii DSM 12804]
 gi|163262080|emb|CAP44382.1| thyA [Bordetella petrii]
          Length = 323

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 166/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++ ++  GS + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLSLIQSILDHGSWQENRTGIRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDY---- 104
            F+RG  + +     G  +WD+ A+++             +LGP+YGVQWR WP Y    
Sbjct: 61  GFMRGARSAADFRALGCKVWDQNANENANWLANPYREGPDDLGPVYGVQWRRWPAYKLLP 120

Query: 105 ---------------------DGN---------VIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D N          +DQ+   + ++ ++P  RR +   WN
Sbjct: 121 LANDAQIRDALGRGYAQVAQLDENGAPHVLLYKAVDQLRQCLDTIHSNPQDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF  +    ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-LLSFRYE------ 245
           G+    F + +GD H+Y NH      QL+R P   P+++++  I D  ++ RYE      
Sbjct: 241 GYTPRWFSYFIGDAHIYENHLPMLREQLTREPYEAPRLVLSDRIPDYAVTGRYEPQWLEQ 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF L  Y+ H A+ A ++V
Sbjct: 301 VEPTDFALEGYQHHPALTAPMAV 323


>gi|317405520|gb|EFV85827.1| thymidylate synthase [Achromobacter xylosoxidans C54]
          Length = 323

 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + E++
Sbjct: 1   MKQYLDLVQSILDTGAWQENRTGIRTLSMPGASLRFDLQQGFPAVTTKKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLRG  + +     G  +WD+ A+++ +            LGP+YGVQWR WP Y    
Sbjct: 61  GFLRGVRSAAEFRELGCKVWDQNANENAQWLANPYREGPDDLGPVYGVQWRQWPAYKLLD 120

Query: 105 ---DGNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
              DG +                           +DQ+   + ++   P  RR +   WN
Sbjct: 121 ADRDGQIADALGRGYTKVADLQEGGASKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF  +    ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245
           G+    F + +GD H+Y NH      QL+R+P   P++ ++  I D   + RYE      
Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTRTPLEAPRLALSDRIPDFAQTGRYEPEWLEK 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y  HA + A ++V
Sbjct: 301 VEPGDFSLAGYTHHAPLTAPMAV 323


>gi|296222344|ref|XP_002757146.1| PREDICTED: thymidylate synthase-like isoform 3 [Callithrix jacchus]
          Length = 230

 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 84/173 (48%), Positives = 117/173 (67%), Gaps = 1/173 (0%)

Query: 93  IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           ++G+Q R S  DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L Q
Sbjct: 58  VFGMQARYSLRDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQ 117

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV NG+LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y N
Sbjct: 118 FYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLN 177

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H E   +QL R PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 178 HIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFKVEGYNPHPTIKMEMAV 230



 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 3  QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL 38
          QYL  + H+++ G  + DRTG GT S FG Q R+ L
Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSL 67


>gi|187477016|ref|YP_785040.1| thymidylate synthase [Bordetella avium 197N]
 gi|115421602|emb|CAJ48112.1| thymidylate synthase [Bordetella avium 197N]
          Length = 323

 Score =  182 bits (461), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 164/323 (50%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ +I  G+ + +RTGV T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MRQYLDLVQSIIDQGAWQENRTGVRTLSLPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD+ A+++ +            LGP+YGVQWR+WP Y    
Sbjct: 61  GFLRSARSAADFRALGCKVWDQNANENSQWLNNPYREGLDDLGPVYGVQWRNWPAYKLLR 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             +DQ+   + ++  +P  RR +   WN
Sbjct: 121 ADRQAQISDALSRGYAKVAELDEAGVPQVLLYKAVDQLRQCLDTIHRNPSDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF  +    ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNASTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-LSFRYE------ 245
           G+    F + +GD H+Y NH +    QL R P   P+++++  I D   + RYE      
Sbjct: 241 GYTPRWFSYFIGDAHIYENHLDMLREQLKREPHASPRLLLSDRIPDFRQTQRYEPEWLEH 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ HA + A ++V
Sbjct: 301 VEPSDFSLEGYQHHAPLTAPMAV 323


>gi|290968843|ref|ZP_06560380.1| thymidylate synthase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781139|gb|EFD93730.1| thymidylate synthase [Megasphaera genomosp. type_1 str. 28L]
          Length = 263

 Score =  182 bits (461), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 147/265 (55%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ +++K G    +RTG+ T       M+FDL++ FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLTIVENILKNGYYADNRTGIPTYKLPHQVMQFDLAEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L      +WDEW   DG +G  YG Q R +         Q  +++ +L+ 
Sbjct: 67  WQLQSNNVHDLQAMNCHVWDEWMRPDGTIGKAYGYQIRKY--------KQTDTLLHTLKT 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP +RR IVS WN+  +  MAL PC     + V++G+L+C L QRSGD+ LG+PFN+  Y
Sbjct: 119 DPQNRRMIVSLWNIEDLPDMALEPCAYQTLWDVNDGRLNCLLIQRSGDMGLGVPFNMTQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS--PRTLPQMIINPNIVDL 239
           ++L  ++A V G   G F H + + H+Y NH      QL+R       P + IN NI D 
Sbjct: 179 AVLVHLIAQVTGLTPGLFTHVINNAHIYENHVAALQTQLARKELAPAAPTLEINKNIKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
            +F  ED  L  Y+    +  +V+V
Sbjct: 239 YAFTPEDIQLIHYKHLGKLPMEVAV 263


>gi|114672497|ref|XP_001150227.1| PREDICTED: thymidylate synthetase isoform 1 [Pan troglodytes]
          Length = 230

 Score =  182 bits (461), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 84/173 (48%), Positives = 117/173 (67%), Gaps = 1/173 (0%)

Query: 93  IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           ++G+Q R S  DY G  +DQ+  ++ +++++P  RR I+ AWN   +  MALPPCH L Q
Sbjct: 58  VFGMQARYSLRDYSGQGVDQLQRVIDTIKSNPDDRRIIMCAWNPRDLPLMALPPCHALCQ 117

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y N
Sbjct: 118 FYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLN 177

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H E   +QL R PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 178 HIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 230



 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 3  QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL 38
          QYL  + H+++ G  + DRTG GT S FG Q R+ L
Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSL 67


>gi|150019760|ref|YP_001312014.1| thymidylate synthase [Clostridium beijerinckii NCIMB 8052]
 gi|189036930|sp|A6M378|TYSY_CLOB8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|149906225|gb|ABR37058.1| Thymidylate synthase [Clostridium beijerinckii NCIMB 8052]
          Length = 263

 Score =  182 bits (461), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/265 (37%), Positives = 145/265 (54%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL +   +++ G    +RTGV T       M+F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   KYLAIANDILENGYFDNNRTGVKTYKLPHQIMQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V IWDEW  +DG +G  YG   + +        DQI  ++ +L+ 
Sbjct: 67  FKDQSNSVKELQSQNVKIWDEWMMEDGTIGTSYGWIVKKF--------DQIDKLIDALKN 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ W +  +D   L PC  L  + V +GKL+C L QRSGD  LG+PFN + Y
Sbjct: 119 NPQDRRMMINLWQIPYLDSAPLYPCCFLTMWDVTDGKLNCMLVQRSGDWGLGVPFNTSQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS--PRTLPQMIINPNIVDL 239
           ++L  +LA V G + G F H + + H+Y N  +   LQL+R       P++ INP I + 
Sbjct: 179 AVLVHLLAQVTGLKPGLFTHVINNAHIYENQVDGLKLQLTRKNDAYNAPKLWINPEITNF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L  Y+ H +I   VSV
Sbjct: 239 YDFTPDDIKLEDYKHHESIKMDVSV 263


>gi|2293410|gb|AAC26325.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 230

 Score =  181 bits (460), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 139/231 (60%), Gaps = 3/231 (1%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIY 94
           FD S+  P+LTTKKV WK+ + ELLW  +  SN V+ L++ GV IWD+W  +DG +G  Y
Sbjct: 1   FDNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAY 59

Query: 95  GVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           G Q  +   + +G  +DQ+  ++  L+ +P SRRHI   W+   +D MAL PC    Q+Y
Sbjct: 60  GFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWSPDELDSMALTPCVYETQWY 119

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V  GKL  ++  RS D+ LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H 
Sbjct: 120 VKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHI 179

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +   +Q+ R     P++ INP + D   F  +DF L +Y+    +L +V+V
Sbjct: 180 DNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLFNYKHGDKLLFEVAV 230


>gi|18150849|dbj|BAB83676.1| thymidylate synthase [Homo sapiens]
 gi|119622125|gb|EAX01720.1| thymidylate synthetase, isoform CRA_e [Homo sapiens]
          Length = 230

 Score =  181 bits (459), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 84/173 (48%), Positives = 116/173 (67%), Gaps = 1/173 (0%)

Query: 93  IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           ++G+Q R S  DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L Q
Sbjct: 58  VFGMQARYSLRDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQ 117

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y N
Sbjct: 118 FYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLN 177

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H E   +QL R PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 178 HIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 230



 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 3  QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL 38
          QYL  ++H+++ G  + DRTG GT S FG Q R+ L
Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSL 67


>gi|76802103|ref|YP_327111.1| thymidylate synthase [Natronomonas pharaonis DSM 2160]
 gi|76557968|emb|CAI49553.1| thymidylate synthase [Natronomonas pharaonis DSM 2160]
          Length = 342

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 165/344 (47%), Gaps = 84/344 (24%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QY DL+  V+  G+ + +RTGV T ++F +    DL  GFPLLTTK++    W S++H
Sbjct: 1   MQQYHDLVSDVLAGGTHKPNRTGVDTIASFSHHYEVDLGAGFPLLTTKRMDGYRWNSLIH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103
           ELLW+L G+ ++  L R    IWD WAD +G L   YG  WR              SWPD
Sbjct: 61  ELLWYLSGEEHIRTL-REETKIWDAWADDEGHLDTAYGRFWRRFPVPDEPARLPGESWPD 119

Query: 104 -----------YDGN---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
                       DG    V DQ++ ++ +L  +P+SRR +V+AW+ A      LPPCH  
Sbjct: 120 DSHRWTTTETTPDGTERQVFDQLAYVLDTLEENPHSRRLVVNAWHPANAAVSTLPPCHYT 179

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           F F V   +L+  L QRSGD+ LG+PFN+A+YSLL   +A+   F+ G F HT+ D H+Y
Sbjct: 180 FVFNVQGDQLNVHLTQRSGDIALGVPFNLAAYSLLAHAVANRTAFEVGSFGHTIVDAHIY 239

Query: 210 ------------------------NNHFEQADL--------------------------Q 219
                                   ++  E  D+                          Q
Sbjct: 240 CGAGDRGAWYADKLPALQDRLNDIDDREEYVDVREWLESEAPAEADDEGGLDHVPGLLTQ 299

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           LSRSPR  P++ +    +D L   Y+D  L  Y+P   I   V+
Sbjct: 300 LSRSPRDRPEIEVADRPLDDL--EYDDVQLHDYDPAPGISFSVA 341


>gi|161610422|gb|ABX74967.1| thymidylate synthase-like protein [Retroperitoneal
           fibromatosis-associated herpesvirus]
          Length = 170

 Score =  180 bits (456), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/156 (53%), Positives = 107/156 (68%)

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ++ I+  ++  P  RR ++SAWN   I KMALPPCH L QFYV  G+LSCQ
Sbjct: 9   DYSGRGVDQLAYILDLIKNHPCDRRMVMSAWNPVDIPKMALPPCHVLCQFYVSAGELSCQ 68

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + GE IH LGD H+Y NH E   +QLSR
Sbjct: 69  LYQRSGDMGLGVPFNIASYALLTYMIAHVSGLKPGELIHVLGDAHIYKNHIEAVKVQLSR 128

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
            PR  P++ I   +  +  F  +DF+L  Y+PH AI
Sbjct: 129 EPRPFPRLHIVRTVSSIEDFTVDDFSLEGYDPHPAI 164


>gi|284164961|ref|YP_003403240.1| thymidylate synthase [Haloterrigena turkmenica DSM 5511]
 gi|284014616|gb|ADB60567.1| thymidylate synthase [Haloterrigena turkmenica DSM 5511]
          Length = 338

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/340 (34%), Positives = 161/340 (47%), Gaps = 80/340 (23%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYL+L+  V+  G+ + +RTGV T S+F      DL  G+PLLTTK++    W S++H
Sbjct: 1   MRQYLELVDTVLSEGTYKPNRTGVDTISSFSEHYEVDLQDGYPLLTTKQMDGYRWNSMLH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103
           E+ W+L G+ ++  L R    IWD WAD +G L   YG  WR              SWPD
Sbjct: 61  EVCWYLSGEEHIRDL-REETKIWDAWADDEGRLDTAYGRFWRRFPIPEDDAQLEGESWPD 119

Query: 104 Y---------DGN-VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
                     DG    DQ+  ++ +L   P SRR +V+AW+ A      LPPCH  F F 
Sbjct: 120 ETHQWVTEEADGRRTFDQLQYVIDTLSDSPNSRRLVVNAWHPANAAVSTLPPCHYSFVFN 179

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY---- 209
               +L+C L QRSGD  LGIPFNIA+Y+LLT ++A   GF+ G F HT+ D H+Y    
Sbjct: 180 AQGDRLNCHLTQRSGDTALGIPFNIAAYALLTKVIAQQTGFKPGTFAHTVVDTHVYCGRG 239

Query: 210 -----------------NNHFEQADL-----------------------------QLSRS 223
                            N+  ++ D                              QLSR 
Sbjct: 240 DRGEWYADNLETLQSRLNDVEDREDYLEVKSWLESAAPDEAEGDERLDHVPGLLEQLSRE 299

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           P   P + +    +D L+  YED  L++YE H  I   V+
Sbjct: 300 PLERPTLEVADVSIDELA--YEDVELKNYESHEGIEFAVA 337


>gi|289812599|ref|ZP_06543228.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 144

 Score =  179 bits (454), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 84/143 (58%), Positives = 102/143 (71%)

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 2   DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 61

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L  
Sbjct: 62  ALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFD 121

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R++DF +  Y+PH  I A V++
Sbjct: 122 YRFDDFEIEGYDPHPGIKAPVAI 144


>gi|229138943|ref|ZP_04267522.1| Thymidylate synthase [Bacillus cereus BDRD-ST26]
 gi|228644568|gb|EEL00821.1| Thymidylate synthase [Bacillus cereus BDRD-ST26]
          Length = 124

 Score =  178 bits (451), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 77/124 (62%), Positives = 96/124 (77%)

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
           MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A   G + GEF+
Sbjct: 1   MALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFV 60

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260
           HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  Y+PH AI A
Sbjct: 61  HTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKA 120

Query: 261 KVSV 264
            V+V
Sbjct: 121 PVAV 124


>gi|325275840|ref|ZP_08141701.1| thymidylate synthase [Pseudomonas sp. TJI-51]
 gi|324099024|gb|EGB97009.1| thymidylate synthase [Pseudomonas sp. TJI-51]
          Length = 306

 Score =  178 bits (451), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 59/304 (19%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++ FLRG  N       G  +
Sbjct: 3   NRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMVGFLRGVKNAGEFRELGCKV 62

Query: 80  WDEWADKDGE------------LGPIYGVQWRSWPDY----------------------- 104
           WD+ A+++ +            LG IYGVQWR WP Y                       
Sbjct: 63  WDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIPLGNPAAIAMAEQAGFRRIA 122

Query: 105 ----DG-------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
               DG         IDQ+   + ++  DP SRR +   WN A +D+MALPPCH L+QF+
Sbjct: 123 QDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWNCAQLDEMALPPCHLLYQFH 182

Query: 154 --VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
             V+  ++S  LY RS D+ LG PFN+   + L  +   + G+    F + +GD H+Y N
Sbjct: 183 PNVETREISLTLYIRSNDLGLGTPFNLTEGAALLALFGRLTGYTPRWFTYFIGDAHVYEN 242

Query: 212 HFEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYE--------DFTLRSYEPHAAILA 260
           H +  + QL R P   P+++I+   P   +   +  E        DF L  YE HA + A
Sbjct: 243 HLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEKIEPSDFWLEGYEHHAPMTA 302

Query: 261 KVSV 264
            ++V
Sbjct: 303 PMAV 306


>gi|289803171|ref|ZP_06533800.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 130

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 76/130 (58%), Positives = 106/130 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIV 130
            DP SRR IV
Sbjct: 121 NDPDSRRIIV 130


>gi|6707737|sp|O30397|TYSY1_BACAM RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1;
           AltName: Full=Thymidylate synthase A; Short=TS A;
           Short=TSase A
 gi|2293412|gb|AAC26326.1| thimidylate synthase [Bacillus amyloliquefaciens]
          Length = 230

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 137/231 (59%), Gaps = 3/231 (1%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIY 94
           FD S+  P+LTTKK+ WK+ + ELLW  +  SN V+ L++  V IWD+W  +DG +G  Y
Sbjct: 1   FDNSE-VPILTTKKLAWKTAIKELLWIWQLKSNDVNDLNKMSVHIWDQWKQEDGTIGHAY 59

Query: 95  GVQW-RSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           G Q  +     +G  +DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+Y
Sbjct: 60  GFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWY 119

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V +GKL  ++  RS D+ LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H 
Sbjct: 120 VKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHI 179

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +   +Q+ R     P++ INP + D   F  +DF L +Y+    +L +V V
Sbjct: 180 DNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVPV 230


>gi|6686055|sp|O30394|TYSY_BACAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName:
           Full=Thymidylate synthase A; Short=TS A; Short=TSase A
 gi|2293406|gb|AAC26323.1| thymidylate synthase [Bacillus atrophaeus]
          Length = 227

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 88/224 (39%), Positives = 133/224 (59%), Gaps = 2/224 (0%)

Query: 43  PLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQW-RS 100
           P+LTTKK+ WK+ + ELLW  +  SN V+ L++  V IWD+W  +DG +G  YG Q  + 
Sbjct: 4   PILTTKKLAWKTAIKELLWIWQLKSNDVNDLNKMSVHIWDQWKQEDGTIGHAYGFQLGKK 63

Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
               +G  +DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV +GKL 
Sbjct: 64  NRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLH 123

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            ++  RS D+ LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+
Sbjct: 124 LEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQM 183

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R     P++ INP + D   F  +DF L +Y+    +L +V V
Sbjct: 184 EREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVRV 227


>gi|213416590|ref|ZP_03349734.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 142

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 101/142 (71%)

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 1   PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 60

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L  +
Sbjct: 61  LLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDY 120

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R++DF +  Y+PH  I A V++
Sbjct: 121 RFDDFEIEGYDPHPGIKAPVAI 142


>gi|324514855|gb|ADY46009.1| Thymidylate synthase [Ascaris suum]
          Length = 195

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/191 (47%), Positives = 122/191 (63%), Gaps = 21/191 (10%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           +YL  ++H+I  G    DRTGVGT S FG    + L  G  PLLTTK+V+WK VV ELLW
Sbjct: 4   KYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWADK-------DGELGPIYGVQWRSW-------- 101
           F++GD++   L   GV IWD     E+ D        +G+LGPIYG QWR +        
Sbjct: 64  FIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYHGTD 123

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ +++ ++ +P SRR I++AWNV  + +MALPPCH L QF V NG+LSC
Sbjct: 124 ADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVRNGELSC 183

Query: 162 QLYQRSGDVFL 172
           QLYQRSGD+ +
Sbjct: 184 QLYQRSGDMVI 194


>gi|119622122|gb|EAX01717.1| thymidylate synthetase, isoform CRA_b [Homo sapiens]
          Length = 165

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 80/162 (49%), Positives = 109/162 (67%)

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 4   DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 63

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 64  LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 123

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 124 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 165


>gi|254252890|ref|ZP_04946208.1| Thymidylate synthase [Burkholderia dolosa AUO158]
 gi|124895499|gb|EAY69379.1| Thymidylate synthase [Burkholderia dolosa AUO158]
          Length = 323

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 158/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQEGFPAVTTKKLAFKSAIGELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +  K  +S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P+++I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLVIADRVPDYAKTGVYGPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|110668372|ref|YP_658183.1| thymidylate synthase [Haloquadratum walsbyi DSM 16790]
 gi|109626119|emb|CAJ52571.1| thymidylate synthase [Haloquadratum walsbyi DSM 16790]
          Length = 336

 Score =  175 bits (444), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 155/338 (45%), Gaps = 78/338 (23%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           MHQY DL+  V++ G  + +RTGV T S+F      +L  GFPLLTTK +    W S++ 
Sbjct: 1   MHQYRDLVTAVLRSGEHKPNRTGVDTISSFSQHYTINLRDGFPLLTTKDLSGSRWHSLLS 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102
           E +W+L G+ ++  L R   SIWD WAD DG L   YG  WR +P               
Sbjct: 61  EFVWYLSGEEHIRSL-REETSIWDAWADDDGRLETAYGRFWRRYPVPSTDSQLPGEAWPV 119

Query: 103 -----DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
                  D    DQ++  ++ L+ +P SRR ++SAW+ A      LPPCH  F F V N 
Sbjct: 120 DDHRWRNDDGTFDQLAYAIEQLQENPQSRRIVISAWHPANAAISTLPPCHYTFVFNVQNN 179

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY-------- 209
           +L+  L QRSGD+ LG+PFNIA+YSLL  ++A       G F H++ D H+Y        
Sbjct: 180 RLNVHLTQRSGDIALGVPFNIAAYSLLATVIAQQTELTPGTFAHSIVDAHIYCGMGDRGA 239

Query: 210 -----------NNHFEQAD---------------------------------LQLSRSPR 225
                       N  E  D                                  Q +RSPR
Sbjct: 240 WYGEGETLDSLRNRLEAVDNPSEYRDVRSWLLESAPSEPANQSGYDHIPGLLEQCARSPR 299

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           + PQ+ I+   V L     E+  L  Y+P  AI   V+
Sbjct: 300 SKPQVAIDD--VSLDDIGVENIHLSGYDPAPAIRFAVA 335


>gi|167570744|ref|ZP_02363618.1| thymidylate synthase [Burkholderia oklahomensis C6786]
          Length = 323

 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 161/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDAGTWQNNRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRAKRSAADFRALGCKVWDANANENAQWLANPYRRGEDDLGDVYGVQWRCWPGYKVLD 120

Query: 105 ---DGNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
              D  +                           IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRVVARFEEGGARKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245
           G+    F + +GD H+Y N  +    QL R P   P++ I   + D   + +YE      
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLEIAERVPDCAKTGQYEPEWLER 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|6681717|gb|AAF23264.1|AF124982_1 thymidylate synthase [Haloferax volcanii]
          Length = 342

 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 157/330 (47%), Gaps = 74/330 (22%)

Query: 5   LDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVHELLW 61
            DL+  V   G  + +RTGV T S F      DL +GFPLLTTK +    W S++HELLW
Sbjct: 15  FDLVTDVFGTGRHKPNRTGVDTISGFSKHYTVDLQEGFPLLTTKDLSGFRWNSLIHELLW 74

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR------------SWPD------ 103
           +  G+ ++  L R    IWD WAD++G L   YG  WR            +WPD      
Sbjct: 75  YFSGEEHIRTL-REETGIWDAWADEEGHLDTAYGRFWRRYPVPEEGLAGEAWPDDGHRWM 133

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
            D    DQ++ ++ +L  +P SRR +++AW+ A      LPPCH  F F V   +L+  L
Sbjct: 134 NDEGTFDQLAYVLDTLDENPNSRRLVINAWHPANAAVSTLPPCHYTFVFNVQGDELNLHL 193

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL----------YNNHF 213
            QRSGD+ LG+PFN+A+Y++L  ++A   GF+ G F HT+ D H+          Y +H 
Sbjct: 194 TQRSGDIALGVPFNLAAYAILAQVVAQRAGFELGSFAHTIVDAHVYCGAGERGAWYGDHL 253

Query: 214 ----------------------------EQAD------------LQLSRSPRTLPQMIIN 233
                                       E+AD            LQ SR PR  P + + 
Sbjct: 254 DELQSRLADVQSPDEYLDVREWLLDAAPEEADGEEDYDHVPGLLLQASREPRERPALDVA 313

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
              ++ LSF  ED  LR Y+P   I   V+
Sbjct: 314 DVPLEDLSF--EDIVLRDYDPADGIRFAVA 341


>gi|161610414|gb|ABX74962.1| thymidylate synthase-like protein [Retroperitoneal
           fibromatosis-associated herpesvirus]
          Length = 170

 Score =  175 bits (443), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 80/162 (49%), Positives = 109/162 (67%)

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ++ ++  ++ +P  RR ++SAWN     KMALPPCH L QFYV  G+LSCQ
Sbjct: 9   DYSGRGVDQLAYLINLIKNNPCDRRMVMSAWNPVDTPKMALPPCHVLCQFYVAAGELSCQ 68

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+ IH LGD H+Y  H +   +QLSR
Sbjct: 69  LYQRSGDMGLGVPFNIASYALLTYMIAHVCGLRPGDLIHVLGDAHIYKTHLDAVKVQLSR 128

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I  ++  +  F  +DF+L  Y PH AI   ++V
Sbjct: 129 EPRPFPRLNIVRSVASIEEFTADDFSLDGYNPHPAIRMDMAV 170


>gi|115351015|ref|YP_772854.1| thymidylate synthase [Burkholderia ambifaria AMMD]
 gi|115281003|gb|ABI86520.1| thymidylate synthase [Burkholderia ambifaria AMMD]
          Length = 323

 Score =  175 bits (443), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+ + +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDIYGVQWRQWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|310831492|ref|YP_003970135.1| putative bifunctional dihydrofolate reductase/thymidylate synthase
           [Cafeteria roenbergensis virus BV-PW1]
 gi|309386676|gb|ADO67536.1| putative bifunctional dihydrofolate reductase/thymidylate synthase
           [Cafeteria roenbergensis virus BV-PW1]
          Length = 452

 Score =  174 bits (442), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/284 (36%), Positives = 153/284 (53%), Gaps = 26/284 (9%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL LL  ++  G  R+ R    T S F   + FD+  GFPLLTTKK+ WK +V ELL+F
Sbjct: 169 KYLHLLSKILNEGEFRQTRNA-NTWSLFNQNLEFDMKDGFPLLTTKKMFWKGIVEELLFF 227

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD-----------GELGPIYGVQWRSW--------PD 103
           +RG +N   L   GV+IW     KD           G++G IYG  WR +         +
Sbjct: 228 IRGHTNSKLLEEKGVNIWKGNTSKDFITKLGLPYEEGDMGKIYGFNWRHFGADYINCNTN 287

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL-FQFYV-DNGKLSC 161
           Y G   DQ+  I++ ++ +P SRR ++S ++ A   +  L PCH L  QFYV D   L  
Sbjct: 288 YTGKGFDQLVKIIEEIKTNPSSRRILMSDFDPATSHQGVLYPCHSLVLQFYVRDEDILDV 347

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           ++YQRS D FLG+PFNI+S SLL  +++ +     G+   +LGD H+Y  H +Q   QL 
Sbjct: 348 KMYQRSVDSFLGLPFNISSTSLLLHIISKLTNKTPGKVSLSLGDCHIYETHRDQVIRQLK 407

Query: 222 RSPRTLPQMIINPNIVDLLSFR---YEDFTLRSYEPHAAILAKV 262
           R P   P++I+ P+   L        E++ + +Y  H  I A++
Sbjct: 408 RLPYNFPKLIL-PDFTSLDQVENSTLENYVIENYLHHKGIKAEM 450


>gi|167563581|ref|ZP_02356497.1| thymidylate synthase [Burkholderia oklahomensis EO147]
          Length = 323

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 161/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDAGTWQNNRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRAKRSAADFRALGCKVWDANANENAQWLANPYRRGEDDLGDVYGVQWRRWPGYKVLD 120

Query: 105 ----------------------DG--------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                 +G          IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AQADAQIADATSRGFRVVARFEEGGARKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245
           G+    F + +GD H+Y N  +    QL R P   P++ I   + D   + +YE      
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLEIAERVPDCAKTGQYEPEWLER 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|170700986|ref|ZP_02891968.1| Thymidylate synthase [Burkholderia ambifaria IOP40-10]
 gi|170134126|gb|EDT02472.1| Thymidylate synthase [Burkholderia ambifaria IOP40-10]
          Length = 323

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+ + +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRVVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|206561247|ref|YP_002232012.1| thymidylate synthase [Burkholderia cenocepacia J2315]
 gi|198037289|emb|CAR53211.1| putative thymidylate synthase [Burkholderia cenocepacia J2315]
          Length = 323

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  GS + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGSWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +  K  +S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|238026573|ref|YP_002910804.1| thymidylate synthase [Burkholderia glumae BGR1]
 gi|237875767|gb|ACR28100.1| Thymidylate synthase [Burkholderia glumae BGR1]
          Length = 323

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 154/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  GS + +RTGV T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGSWQENRTGVRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANENAAWLANPYRTGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AQATAQLEDALARGYRIVTRFDEAGAQKLLLHKAIDQLRDCLDTIMRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
              ++++ALP CH L+QF  +  K  +S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PVKLEEIALPACHLLYQFLPNLAKREISLCLYIRSNDVGLGTPFNLAEGAALLELVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+Q   F + +GD H+Y N  +    QL R P   P++ I   + D           L  
Sbjct: 241 GYQPRWFSYFIGDAHIYENQLDMLRQQLEREPYESPRLEIAERVPDYAKTGVYAPEWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  HA + A ++V
Sbjct: 301 IEPADFTLAGYRHHAPLSAPMAV 323


>gi|83720929|ref|YP_442217.1| thymidylate synthase [Burkholderia thailandensis E264]
 gi|167581100|ref|ZP_02373974.1| thymidylate synthase [Burkholderia thailandensis TXDOH]
 gi|167619181|ref|ZP_02387812.1| thymidylate synthase [Burkholderia thailandensis Bt4]
 gi|257138410|ref|ZP_05586672.1| thymidylate synthase [Burkholderia thailandensis E264]
 gi|83654754|gb|ABC38817.1| thymidylate synthase [Burkholderia thailandensis E264]
          Length = 323

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 160/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAAEFRALGCKVWDANANENAQWLANPYRRGADDLGDVYGVQWRRWPGYKVLD 120

Query: 105 ---DGNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
              D  +                           IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRIVARFEEGGADKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL-SFRYE------ 245
           G+    F + +GD H+Y N  +    QL R P   P++ +   + D   + +YE      
Sbjct: 241 GYSPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLELAERVPDYAKTGKYEPQWLER 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 VEPSDFTLVGYRHHEPLSAPMAV 323


>gi|186475553|ref|YP_001857023.1| thymidylate synthase [Burkholderia phymatum STM815]
 gi|184192012|gb|ACC69977.1| Thymidylate synthase [Burkholderia phymatum STM815]
          Length = 323

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  GS + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGSWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYREGPDDLGDVYGVQWRRWPAYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ATASAQLEDAASRGYAPVTEFEEDGMRKVLLYKAIDQLRQCLDAIMHNPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A+++++ALP CH L+QF  +  K  +S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLEEIALPACHLLYQFLPNASKREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   PQ  I+  + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTRDPYESPQFAISERVPDYTKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A +++
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAI 323


>gi|307730580|ref|YP_003907804.1| thymidylate synthase [Burkholderia sp. CCGE1003]
 gi|307585115|gb|ADN58513.1| thymidylate synthase [Burkholderia sp. CCGE1003]
          Length = 323

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 159/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLD 120

Query: 105 ---------------------DGN---------VIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D N          IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ASASAQLADASARGFQVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   ++L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARREISLCLYIRSNDVGLGTPFNLTEGAVLLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           GF    F + +GD H+Y N  +  + QL+R P   P + I+  + +           L  
Sbjct: 241 GFTPRWFTYFIGDAHIYENQLDMLNQQLTREPYESPTLAISERVPEYAKTGVYAPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|330815938|ref|YP_004359643.1| Thymidylate synthase [Burkholderia gladioli BSR3]
 gi|327368331|gb|AEA59687.1| Thymidylate synthase [Burkholderia gladioli BSR3]
          Length = 323

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 155/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRSILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+ +             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANDNAAWLANPYRTGLDDLGDVYGVQWRRWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  +G         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AQATGQLEDALARGYRIVTRFEEEGVQQVLLYKAIDQLRDCLDTIMRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
              +D++ALP CH L+QF  +    ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PVKLDEIALPACHLLYQFLPNPVTREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  E  + QL R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLEMLNQQLEREPYESPRLAIADRVPDYAKTGVYEPEWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  HA + A ++V
Sbjct: 301 IEPADFSLEGYRHHAPLTAPMAV 323


>gi|325522963|gb|EGD01399.1| thymidylate synthase [Burkholderia sp. TJI49]
          Length = 323

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIIENPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +  K  +S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNAAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|161525388|ref|YP_001580400.1| thymidylate synthase [Burkholderia multivorans ATCC 17616]
 gi|189349875|ref|YP_001945503.1| thymidylate synthase [Burkholderia multivorans ATCC 17616]
 gi|221201301|ref|ZP_03574341.1| thymidylate synthase [Burkholderia multivorans CGD2M]
 gi|221206245|ref|ZP_03579258.1| thymidylate synthase [Burkholderia multivorans CGD2]
 gi|221213524|ref|ZP_03586498.1| thymidylate synthase [Burkholderia multivorans CGD1]
 gi|160342817|gb|ABX15903.1| Thymidylate synthase [Burkholderia multivorans ATCC 17616]
 gi|189333897|dbj|BAG42967.1| thymidylate synthase [Burkholderia multivorans ATCC 17616]
 gi|221166313|gb|EED98785.1| thymidylate synthase [Burkholderia multivorans CGD1]
 gi|221173554|gb|EEE05988.1| thymidylate synthase [Burkholderia multivorans CGD2]
 gi|221179151|gb|EEE11558.1| thymidylate synthase [Burkholderia multivorans CGD2M]
          Length = 323

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AHADAQLADAQRRGFRIVTRFDEDGAQKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +  K  +S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P+++I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPRLVIADRVPEYAKTGVYEPEWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|167586578|ref|ZP_02378966.1| Thymidylate synthase [Burkholderia ubonensis Bu]
          Length = 323

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPHRQGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AGADAQIADATGRGFRIVARFDEDGAPKVLLYKAIDQLRECLDTIMQDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +  K  +S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFVGDAHIYENQLDMLQQQLAREPYESPRLAIADRVPEYAQTGVYAPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|213025197|ref|ZP_03339644.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 151

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 73/119 (61%), Positives = 97/119 (81%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+
Sbjct: 1   MRFNLLEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           YG QWR+WP  DG  IDQI++++  L+ DP SRR IVSAWNV  +DKMAL PCH    F
Sbjct: 61  YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFSSF 119


>gi|295677229|ref|YP_003605753.1| thymidylate synthase [Burkholderia sp. CCGE1002]
 gi|295437072|gb|ADG16242.1| thymidylate synthase [Burkholderia sp. CCGE1002]
          Length = 323

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 158/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRELGCKVWDGNANQNAQWLANPYREGPDDLGDVYGVQWRKWPAYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ASASAQLADAQARGFRVITQFDEDGRSKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTRREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P++ I+  + D           L  
Sbjct: 241 GYTPRWFSYFIGDAHIYENQLDMLQQQLKREPYESPRLAISDRVPDYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H  + A +++
Sbjct: 301 IEPADFSLVGYQHHEPLTAPMAI 323


>gi|171317124|ref|ZP_02906326.1| Thymidylate synthase [Burkholderia ambifaria MEX-5]
 gi|171097691|gb|EDT42521.1| Thymidylate synthase [Burkholderia ambifaria MEX-5]
          Length = 323

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+ + +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 105 ---DGNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
              D  +                           IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRVVTHFDEGGASKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|172060020|ref|YP_001807672.1| thymidylate synthase [Burkholderia ambifaria MC40-6]
 gi|171992537|gb|ACB63456.1| Thymidylate synthase [Burkholderia ambifaria MC40-6]
          Length = 323

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+ + +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 105 ---DGNV---------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
              D  +                           IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDCAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|107022163|ref|YP_620490.1| thymidylate synthase [Burkholderia cenocepacia AU 1054]
 gi|116689108|ref|YP_834731.1| thymidylate synthase [Burkholderia cenocepacia HI2424]
 gi|170732396|ref|YP_001764343.1| thymidylate synthase [Burkholderia cenocepacia MC0-3]
 gi|254245954|ref|ZP_04939275.1| Thymidylate synthase [Burkholderia cenocepacia PC184]
 gi|105892352|gb|ABF75517.1| thymidylate synthase [Burkholderia cenocepacia AU 1054]
 gi|116647197|gb|ABK07838.1| thymidylate synthase [Burkholderia cenocepacia HI2424]
 gi|124870730|gb|EAY62446.1| Thymidylate synthase [Burkholderia cenocepacia PC184]
 gi|169815638|gb|ACA90221.1| Thymidylate synthase [Burkholderia cenocepacia MC0-3]
          Length = 323

 Score =  172 bits (436), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---D 105
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y   D
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 106 GNV-------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            N                                IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ANADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +  K  +S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPEYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|78065671|ref|YP_368440.1| thymidylate synthase [Burkholderia sp. 383]
 gi|77966416|gb|ABB07796.1| thymidylate synthase [Burkholderia sp. 383]
          Length = 323

 Score =  172 bits (435), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +  K  +S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLELVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEIAERVPEYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|53720080|ref|YP_109066.1| thymidylate synthase [Burkholderia pseudomallei K96243]
 gi|53724744|ref|YP_102198.1| thymidylate synthase [Burkholderia mallei ATCC 23344]
 gi|67642871|ref|ZP_00441622.1| thymidylate synthase [Burkholderia mallei GB8 horse 4]
 gi|76811492|ref|YP_334325.1| thymidylate synthase [Burkholderia pseudomallei 1710b]
 gi|121599317|ref|YP_993825.1| thymidylate synthase [Burkholderia mallei SAVP1]
 gi|124384034|ref|YP_001026887.1| thymidylate synthase [Burkholderia mallei NCTC 10229]
 gi|126450390|ref|YP_001079826.1| thymidylate synthase [Burkholderia mallei NCTC 10247]
 gi|126454374|ref|YP_001067140.1| thymidylate synthase [Burkholderia pseudomallei 1106a]
 gi|167002756|ref|ZP_02268546.1| thymidylate synthase [Burkholderia mallei PRL-20]
 gi|167739605|ref|ZP_02412379.1| thymidylate synthase [Burkholderia pseudomallei 14]
 gi|167816807|ref|ZP_02448487.1| thymidylate synthase [Burkholderia pseudomallei 91]
 gi|167825213|ref|ZP_02456684.1| thymidylate synthase [Burkholderia pseudomallei 9]
 gi|167846713|ref|ZP_02472221.1| thymidylate synthase [Burkholderia pseudomallei B7210]
 gi|167903685|ref|ZP_02490890.1| thymidylate synthase [Burkholderia pseudomallei NCTC 13177]
 gi|167911934|ref|ZP_02499025.1| thymidylate synthase [Burkholderia pseudomallei 112]
 gi|217421016|ref|ZP_03452521.1| thymidylate synthase [Burkholderia pseudomallei 576]
 gi|237813246|ref|YP_002897697.1| thymidylate synthase [Burkholderia pseudomallei MSHR346]
 gi|242317181|ref|ZP_04816197.1| thymidylate synthase [Burkholderia pseudomallei 1106b]
 gi|254177043|ref|ZP_04883700.1| thymidylate synthase [Burkholderia mallei ATCC 10399]
 gi|254181135|ref|ZP_04887733.1| thymidylate synthase [Burkholderia pseudomallei 1655]
 gi|254191996|ref|ZP_04898496.1| thymidylate synthase [Burkholderia pseudomallei Pasteur 52237]
 gi|254195598|ref|ZP_04902025.1| thymidylate synthase [Burkholderia pseudomallei S13]
 gi|254203878|ref|ZP_04910238.1| thymidylate synthase [Burkholderia mallei FMH]
 gi|254208859|ref|ZP_04915207.1| thymidylate synthase [Burkholderia mallei JHU]
 gi|254259968|ref|ZP_04951022.1| thymidylate synthase [Burkholderia pseudomallei 1710a]
 gi|254295668|ref|ZP_04963126.1| thymidylate synthase [Burkholderia pseudomallei 406e]
 gi|254360085|ref|ZP_04976355.1| thymidylate synthase [Burkholderia mallei 2002721280]
 gi|52210494|emb|CAH36477.1| putative thymidylate synthase [Burkholderia pseudomallei K96243]
 gi|52428167|gb|AAU48760.1| thymidylate synthase [Burkholderia mallei ATCC 23344]
 gi|76580945|gb|ABA50420.1| thymidylate synthase [Burkholderia pseudomallei 1710b]
 gi|121228127|gb|ABM50645.1| thymidylate synthase [Burkholderia mallei SAVP1]
 gi|124292054|gb|ABN01323.1| thymidylate synthase [Burkholderia mallei NCTC 10229]
 gi|126228016|gb|ABN91556.1| thymidylate synthase [Burkholderia pseudomallei 1106a]
 gi|126243260|gb|ABO06353.1| thymidylate synthase [Burkholderia mallei NCTC 10247]
 gi|147745390|gb|EDK52470.1| thymidylate synthase [Burkholderia mallei FMH]
 gi|147750735|gb|EDK57804.1| thymidylate synthase [Burkholderia mallei JHU]
 gi|148029325|gb|EDK87230.1| thymidylate synthase [Burkholderia mallei 2002721280]
 gi|157805557|gb|EDO82727.1| thymidylate synthase [Burkholderia pseudomallei 406e]
 gi|157987818|gb|EDO95583.1| thymidylate synthase [Burkholderia pseudomallei Pasteur 52237]
 gi|160698084|gb|EDP88054.1| thymidylate synthase [Burkholderia mallei ATCC 10399]
 gi|169652344|gb|EDS85037.1| thymidylate synthase [Burkholderia pseudomallei S13]
 gi|184211674|gb|EDU08717.1| thymidylate synthase [Burkholderia pseudomallei 1655]
 gi|217396428|gb|EEC36445.1| thymidylate synthase [Burkholderia pseudomallei 576]
 gi|237504707|gb|ACQ97025.1| thymidylate synthase [Burkholderia pseudomallei MSHR346]
 gi|238524079|gb|EEP87514.1| thymidylate synthase [Burkholderia mallei GB8 horse 4]
 gi|242140420|gb|EES26822.1| thymidylate synthase [Burkholderia pseudomallei 1106b]
 gi|243061578|gb|EES43764.1| thymidylate synthase [Burkholderia mallei PRL-20]
 gi|254218657|gb|EET08041.1| thymidylate synthase [Burkholderia pseudomallei 1710a]
          Length = 323

 Score =  171 bits (434), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGAQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       QL R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323


>gi|222480576|ref|YP_002566813.1| thymidylate synthase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453478|gb|ACM57743.1| thymidylate synthase [Halorubrum lacusprofundi ATCC 49239]
          Length = 342

 Score =  171 bits (434), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 135/240 (56%), Gaps = 32/240 (13%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYLDL+   +  G+ + +RTGV T +TF  Q   DLS+GFPLLTTKK+    W S++H
Sbjct: 1   MQQYLDLVDDTLSTGTYKPNRTGVDTIATFSGQYTVDLSEGFPLLTTKKMDGYRWNSLIH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----------- 106
           E+LW+L G+ ++  L R    IWD WAD +G L   YG  WR +P  DG           
Sbjct: 61  EVLWYLSGEEHIRDL-REETKIWDAWADDEGRLDTAYGRFWRRFPVPDGVDALPGETWPK 119

Query: 107 -----------------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
                               DQI  ++ +L  +P SRR +V+AW+ A      LPPCH  
Sbjct: 120 DAHRWVTVEEGPEGVERRTFDQIQYVLDTLDENPRSRRMVVNAWHPANAAVSTLPPCHYT 179

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           F   V +G+L+  L QRSGD+ LG+PFNIA+Y+LL   LA   GF+ GEF HT+ D H+Y
Sbjct: 180 FVVNVQDGRLNLHLTQRSGDIALGVPFNIAAYALLANALAQRTGFEIGEFGHTVVDAHIY 239


>gi|126440677|ref|YP_001059852.1| thymidylate synthase [Burkholderia pseudomallei 668]
 gi|167720616|ref|ZP_02403852.1| thymidylate synthase [Burkholderia pseudomallei DM98]
 gi|126220170|gb|ABN83676.1| thymidylate synthase [Burkholderia pseudomallei 668]
          Length = 323

 Score =  171 bits (434), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       QL R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323


>gi|134295116|ref|YP_001118851.1| thymidylate synthase [Burkholderia vietnamiensis G4]
 gi|134138273|gb|ABO54016.1| thymidylate synthase [Burkholderia vietnamiensis G4]
          Length = 323

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+ + +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANDNAQWLANPYRRGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ASADAQIADATRRGFRIVTQFDEDGAPKVLLYKAIDQLRQCLDTIIENPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +  K  +S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNAAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYDSPRLEIAERVPDYAKTGVYAPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLSAPMAV 323


>gi|323526913|ref|YP_004229066.1| thymidylate synthase [Burkholderia sp. CCGE1001]
 gi|323383915|gb|ADX56006.1| thymidylate synthase [Burkholderia sp. CCGE1001]
          Length = 323

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLD 120

Query: 105 ---------------------DGN---------VIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D N          IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGAAAQLADASARGFRVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P + I+  + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLAREPYDSPTLAISDRVPDYAQTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLIGYRHHEPLTAPMAV 323


>gi|170696336|ref|ZP_02887466.1| Thymidylate synthase [Burkholderia graminis C4D1M]
 gi|170138742|gb|EDT06940.1| Thymidylate synthase [Burkholderia graminis C4D1M]
          Length = 323

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 155/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  GS + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLDLVRTILDTGSWQENRTGIRTISMPGAVLRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLD 120

Query: 105 ---------------------DGN---------VIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D N          IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AAASAQLADATARGFQVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       QL R P   P + I+  + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLAMLQEQLKREPYESPTLAISDRVPDYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|182418738|ref|ZP_02950011.1| thymidylate synthase [Clostridium butyricum 5521]
 gi|237669671|ref|ZP_04529648.1| thymidylate synthase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377432|gb|EDT74988.1| thymidylate synthase [Clostridium butyricum 5521]
 gi|237654745|gb|EEP52308.1| thymidylate synthase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 263

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 143/265 (53%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL + + +++ G    +RTG+ T       M+F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   KYLSIAKDILENGYYDNNRTGMPTYKLPHQIMQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V IWDEW  +DG +G  YG   +          +QI  ++ +L+ 
Sbjct: 67  FKDQSNNVKDLQAQNVRIWDEWEMEDGTIGTSYGWVVKK--------FNQIDKLIDALKN 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ W    +D  AL PC     + V +G+L+C L QRSGD+ LG+PFN + Y
Sbjct: 119 NPQDRRMMLNLWQWEHLDGGALYPCCWATMWDVTDGRLNCMLIQRSGDLPLGVPFNTSQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVDL 239
           ++L  +LA V G + G F H + + H+Y N  E    QL+R       P++ INP I + 
Sbjct: 179 AVLVHLLAQVTGLKPGLFTHVINNAHIYENQIEGMKTQLTRKDDAYDAPKLWINPEIKNF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ++  L  Y+ H  I   VSV
Sbjct: 239 YDFTPDNIKLIDYKHHETIKMPVSV 263


>gi|134276945|ref|ZP_01763660.1| thymidylate synthase [Burkholderia pseudomallei 305]
 gi|134250595|gb|EBA50674.1| thymidylate synthase [Burkholderia pseudomallei 305]
          Length = 323

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGAQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  L+ RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLFIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       QL R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323


>gi|167919927|ref|ZP_02507018.1| thymidylate synthase [Burkholderia pseudomallei BCC215]
          Length = 323

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 155/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       Q  R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQFEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323


>gi|167895299|ref|ZP_02482701.1| thymidylate synthase [Burkholderia pseudomallei 7894]
          Length = 323

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 155/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGIDDLGDVYGVQWRRWPGYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       Q  R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQFEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323


>gi|296158288|ref|ZP_06841120.1| thymidylate synthase [Burkholderia sp. Ch1-1]
 gi|295891624|gb|EFG71410.1| thymidylate synthase [Burkholderia sp. Ch1-1]
          Length = 323

 Score =  169 bits (427), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLN 120

Query: 105 -----------------------DGN-------VIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG+        IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ADASAQLVDATARGFRVVTEFEEDGSRKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +    ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFVPNAVRKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P   I+  + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPAFAISDRVPEYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPADFSLVGYRHHDPLTAPMAV 323


>gi|187924930|ref|YP_001896572.1| thymidylate synthase [Burkholderia phytofirmans PsJN]
 gi|187716124|gb|ACD17348.1| Thymidylate synthase [Burkholderia phytofirmans PsJN]
          Length = 323

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLD 120

Query: 105 -----------------------DGN-------VIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG+        IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ANAGAQLADATARGFQVVTEFEEDGSNKILLYKAIDQLRQCLDTIMHNPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +    ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNAVTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P   I+  + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPSFAISERVPEYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAV 323


>gi|91784762|ref|YP_559968.1| thymidylate synthase [Burkholderia xenovorans LB400]
 gi|91688716|gb|ABE31916.1| thymidylate synthase [Burkholderia xenovorans LB400]
          Length = 323

 Score =  168 bits (425), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ ++S V EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFRSAVGELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLN 120

Query: 105 -----------------------DGN-------VIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG+        IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ADASAQLGDATARGFRVVTGFEEDGSRKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +    ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFVPNAVRKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P   I+  + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPAFAISDRVPEYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAV 323


>gi|209522037|ref|ZP_03270694.1| Thymidylate synthase [Burkholderia sp. H160]
 gi|209497520|gb|EDZ97718.1| Thymidylate synthase [Burkholderia sp. H160]
          Length = 323

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDGNANQNAQWLANPYREGPDDLGDVYGVQWRKWPAYKVLD 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  +G         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ASASAQLADAQARGFRVITQFDEEGRSKVLLYKAIDQLRQCLDTIIENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTRREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P++ I+  + +           L  
Sbjct: 241 GYTPRWFSYFIGDAHIYENQLDMLHQQLKREPYESPRLAISDRVPEYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A +++
Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAI 323


>gi|323934213|gb|EGB30637.1| thymidylate synthase [Escherichia coli E1520]
          Length = 363

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 160/349 (45%), Gaps = 88/349 (25%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           Y  ++  V+K G    DRTG GT ST      + L+ G  PL++ K V+ K ++ EL W+
Sbjct: 15  YAKVIETVLKSGVQADDRTGTGTLSTCYVPSYYMLTGGTVPLISGKAVNLKPLLVELEWY 74

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD------------------- 103
           L+G  N+ +L  +GV IWD WAD++G+LGP+YG QWR W D                   
Sbjct: 75  LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIATFRER 134

Query: 104 ------YDG---------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
                 Y G           IDQ+  IV +LR +P  RR +++AWNV  ++ M LPPCH 
Sbjct: 135 GYKVEGYLGISEDRVVLSREIDQLQRIVDTLRTNPTDRRIMLNAWNVGELEDMKLPPCHF 194

Query: 149 LFQFY-------------------------------------VDNGKLSCQL-------- 163
           +F  +                                     +D      +L        
Sbjct: 195 VFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLYDLEMDGSVTEAELDELGIPKR 254

Query: 164 ------YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ-A 216
                  QRS D F+G+PFNIA Y +LT  LA + G   G F+H   DVHLYNNH E   
Sbjct: 255 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYNNHMEGVC 314

Query: 217 DLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +L   ++P     ++I P+   +L  F++++  +  Y+P   I   V+V
Sbjct: 315 ELMKRQAPEHSDPVVIFPHEWSELDDFKWDEVLILGYDPLPWIKVPVAV 363


>gi|293411959|ref|ZP_06654684.1| thymidylate synthase [Escherichia coli B354]
 gi|220980066|emb|CAP72258.1| Thymidylate synthase (EC 2.1.1.45) (TS) (TSase) [Escherichia coli
           LF82]
 gi|291469514|gb|EFF12003.1| thymidylate synthase [Escherichia coli B354]
          Length = 367

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 160/349 (45%), Gaps = 88/349 (25%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           Y  ++  V+K G    DRTG GT ST      + L+ G  PL++ K V+ K ++ EL W+
Sbjct: 19  YAKVIETVLKSGVQADDRTGTGTLSTCYVPSYYMLTGGTVPLISGKAVNLKPLLVELEWY 78

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD------------------- 103
           L+G  N+ +L  +GV IWD WAD++G+LGP+YG QWR W D                   
Sbjct: 79  LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIATFRER 138

Query: 104 ------YDG---------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
                 Y G           IDQ+  IV +LR +P  RR +++AWNV  ++ M LPPCH 
Sbjct: 139 GYKVEGYLGISEDRVVLSREIDQLQRIVDTLRTNPTDRRIMLNAWNVGELEDMKLPPCHF 198

Query: 149 LFQFY-------------------------------------VDNGKLSCQL-------- 163
           +F  +                                     +D      +L        
Sbjct: 199 VFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLYDLEMDGSVTEAELDELGIPKR 258

Query: 164 ------YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ-A 216
                  QRS D F+G+PFNIA Y +LT  LA + G   G F+H   DVHLYNNH E   
Sbjct: 259 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYNNHMEGVC 318

Query: 217 DLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +L   ++P     ++I P+   +L  F++++  +  Y+P   I   V+V
Sbjct: 319 ELMKRQAPEHSDPVVIFPHEWSELDDFKWDEVLILGYDPLPWIKVPVAV 367


>gi|269975303|gb|ACZ55527.1| thymidylate synthase [Staphylococcus phage SA1]
          Length = 299

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 147/293 (50%), Gaps = 35/293 (11%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y ++L HV+  G  R  RTG    +    Q RFD+  GFPLLT+K+V  + V+ E LWFL
Sbjct: 8   YKNILNHVLSVGELRTTRTGDVISAFAPPQFRFDMRTGFPLLTSKQVFTRQVIGEALWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDE--------WADK----------------DGELGPIYGVQWR 99
            G++ +  L       WDE        W+D                 D   G IYGVQWR
Sbjct: 68  NGENKLGELRYR---TWDENDGERWTIWSDDFKRWLSSNYSSEQDWLDDAGGRIYGVQWR 124

Query: 100 SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDN- 156
           ++  ++G V+DQ+ ++V  ++ D   R  +V+AWN A I  + MAL PCH LFQ Y+ N 
Sbjct: 125 NFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVLFQIYITNE 184

Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           G++  Q YQRS D FLG+PFNIASY  +  +L  + G+     I   GD  +Y NH +Q 
Sbjct: 185 GEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQNHMKQV 244

Query: 217 DLQLSRSPRTLPQMIIN---PNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264
              ++      P   I      + DL      DF   + +Y+    I A +SV
Sbjct: 245 YELMNNEEFHAPTFEIGIPLNTLSDLKHLTASDFIGGINNYQHAGKIEAPLSV 297


>gi|15226577|ref|NP_179750.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           / DHFR-TS, putative [Arabidopsis thaliana]
 gi|4567234|gb|AAD23649.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis
           thaliana]
 gi|330252101|gb|AEC07195.1| bifunctional dihydrofolate reductase/thymidylate synthase
           [Arabidopsis thaliana]
          Length = 492

 Score =  165 bits (418), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 146/263 (55%), Gaps = 28/263 (10%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L++++I  G    D     T S FG QMRF+L K FPLLTTKK+ W  VV E+L  +
Sbjct: 238 YLNLVQNIISSG----DMNDNSTLSKFGCQMRFNLRKTFPLLTTKKIFWLGVVEEILQLI 293

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD--------KDGELGPIYGVQWRSWPDYDGNVI- 109
            G +N      +G  IWD     E+ D        +DG+   ++G+ W+     D   + 
Sbjct: 294 SGSNNP---KENGSHIWDTDEAKEYLDSFGVNATEEDGDNPFLHGLHWKHC---DARFVI 347

Query: 110 ---DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
               Q+S ++  ++ +P+ +R +++A N  L  K+++ PCH   QFYV NG++SCQ+YQ 
Sbjct: 348 QEFSQLSDVINKIKNNPHDQRIMLAACN-PLDFKLSVSPCHTFTQFYVANGEVSCQIYQS 406

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S +  +GIPF+IA+YSLLT ++A V     G+FIH +G  ++   H +    QL  SP+ 
Sbjct: 407 STEASIGIPFSIATYSLLTCIIAHVCDLGAGDFIHVIGQAYINKAHVKAIQKQLQISPKP 466

Query: 227 LPQMIINPNIVDLLSFRYEDFTL 249
            P + INP    + +F   D  L
Sbjct: 467 FPILKINPEKKKMDNFEASDLEL 489


>gi|38707853|ref|NP_944928.1| Thymidylate synthase [Enterobacteria phage Felix 01]
 gi|33340456|gb|AAQ14807.1| putative thymidylate synthase [Enterobacteria phage Felix 01]
          Length = 299

 Score =  165 bits (417), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 147/296 (49%), Gaps = 41/296 (13%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y ++L HV+  G  R  RTG    +    Q RFD+  GFPLLT+K+V  + V+ E LWFL
Sbjct: 8   YKNILNHVLSVGELRTTRTGDVISAFAPPQFRFDMRTGFPLLTSKQVFTRQVIGEALWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGEL---------------------------GPIYGV 96
            G++ +S L       +  W + DGE                            G IYGV
Sbjct: 68  NGENKLSELR------YRTWGENDGERWTIWSDDFKRWLSSNYSSEQDWLEDAGGRIYGV 121

Query: 97  QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYV 154
           QWR++  ++G V+DQ+ ++V  ++ D   R  +V+AWN A I  + MAL PCH +FQ Y+
Sbjct: 122 QWRNFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVMFQIYI 181

Query: 155 DN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
            N G++  Q YQRS D FLG+PFNIASY  +  +L  + G+     I   GD  +Y NH 
Sbjct: 182 TNEGEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQNHM 241

Query: 214 EQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264
           +Q    ++      P   I      + DL      DF   + +Y+    I A +SV
Sbjct: 242 KQVYELMNNEEFHAPTFEIGLPLNTLSDLKHLTASDFIGGINNYKHAGKIEAPLSV 297


>gi|301768887|ref|XP_002919869.1| PREDICTED: LOW QUALITY PROTEIN: thymidylate synthase-like
           [Ailuropoda melanoleuca]
          Length = 358

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 148/283 (52%), Gaps = 24/283 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           Q L  ++H++     + + TG      F  Q  + L + FPLLTT +V  K V+ ELLWF
Sbjct: 53  QCLGQIQHILHXRFQKDECTGTSMLWVF-MQAHYSLREEFPLLTTTRVFXKGVLEELLWF 111

Query: 63  LRGDSNVSY-LHRHGVSIWDEWADKD------------GELGPIYGVQWR----SWPDYD 105
           ++G +N  + L   GV IWD  A +D            G+LGP YG QWR     + D D
Sbjct: 112 IKGSTNAKHSLSSKGVKIWDANASRDFLDSLGFSSGVEGDLGPGYGSQWRHLGAEYKDKD 171

Query: 106 ----GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
               G+ +DQ+  +  ++   P  RR I+  WN   +  +AL PCH L       G+ SC
Sbjct: 172 AGDSGHGVDQLQKVFGTIETKPEDRRIILCGWNPKALPLLALLPCHALCXEL--RGEWSC 229

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLY+R+GD+ L +PFN+A  + L  ++A + G + G  + TL D  +Y NH E   +QL 
Sbjct: 230 QLYRRAGDMGLAVPFNLACRTPLAYVIAHITGLKPGNLVRTLXDTRIYLNHVEPLKMQLQ 289

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  R  P++ I   +  +  F+ EDF ++ Y PH  I  +++V
Sbjct: 290 QETRPFPKLKILQKVEMIHDFKAEDFQIKGYNPHPTIKMEMAV 332


>gi|89512123|gb|ABD73958.1| dihydrofolate reductase [Plasmodium atheruri]
 gi|89512137|gb|ABD73965.1| dihydrofolate reductase [Plasmodium vinckei]
 gi|89512147|gb|ABD73970.1| dihydrofolate reductase [Plasmodium vinckei petteri]
 gi|89512149|gb|ABD73971.1| dihydrofolate reductase [Plasmodium vinckei petteri]
          Length = 172

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+LS+ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         DY    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             +DKMALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDLDKMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|238801819|ref|YP_002922869.1| thymidylate synthase [Enterobacteria phage WV8]
 gi|216263032|gb|ACJ71900.1| thymidylate synthase [Enterobacteria phage WV8]
          Length = 299

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 146/296 (49%), Gaps = 41/296 (13%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y ++L HV+  G  R  RTG    +    + RFD+  GFPLLT+K+V  + V+ E LWFL
Sbjct: 8   YKNILNHVLSVGELRTTRTGDVISAFAPPKFRFDMRTGFPLLTSKQVFTRQVIGEALWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGEL---------------------------GPIYGV 96
            G++ +  L       +  W + DGE                            G IYGV
Sbjct: 68  NGENKLGELR------YRTWGENDGERWTIWSDDFKRWLSSNYSSEQDWLEDAGGRIYGV 121

Query: 97  QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYV 154
           QWR++  ++G V+DQ+ ++V  ++ D   R  +V+AWN A I  + MAL PCH LFQ Y+
Sbjct: 122 QWRNFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVLFQIYI 181

Query: 155 DN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
            N G++  Q YQRS D FLG+PFNIASY  +  +L  + G+     I   GD  +Y NH 
Sbjct: 182 TNEGEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQNHM 241

Query: 214 EQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264
           +Q    ++      P   I      + DL      DF   + +Y+    I A +SV
Sbjct: 242 KQVYELMNNEEFHAPTFEIGVQLNTLSDLKHLTASDFIGGINNYQHAGKIEAPLSV 297


>gi|89512143|gb|ABD73968.1| dihydrofolate reductase [Plasmodium vinckei lentum]
          Length = 172

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+LS+ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         DY    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             ID+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDIDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|89512139|gb|ABD73966.1| dihydrofolate reductase [Plasmodium vinckei vinckei]
          Length = 172

 Score =  162 bits (411), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+LS+ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWR--------SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR         + DY    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMYADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|18466784|ref|NP_569591.1| putative thymidylate synthase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16506100|emb|CAD09986.1| putative thymidylate synthase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
          Length = 371

 Score =  162 bits (411), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 156/349 (44%), Gaps = 88/349 (25%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           Y  ++  V+  G    DRTG GT+S       + L+ G  PL++ K V+ K ++ EL W+
Sbjct: 23  YAKVVETVLNSGVHAGDRTGTGTKSVSYVPSYYMLTGGSVPLISGKAVNLKPLLVELEWY 82

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD------------------- 103
           L+G  N+ +L  +GV IWD WAD++G+LGP+YG QWR W D                   
Sbjct: 83  LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIDTFRER 142

Query: 104 ------YDG---------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
                 Y G           IDQ+  IV +LR +P  RR +++AWNV  ++ M LPPCH 
Sbjct: 143 GYKVEGYLGVSEDRVVLSREIDQLQRIVHTLRTNPTDRRILLNAWNVGELEDMKLPPCHF 202

Query: 149 LFQFY-------------VDNG-------------KLSCQL------------------- 163
           +F  +              D G             ++ C L                   
Sbjct: 203 VFSLWSRKLDFETRLTMATDIGIQHNRHGHESIYTQMLCLLERDGGITENLLDELGIPKR 262

Query: 164 ------YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
                  QRS D F+G+PFNIA Y +LT  LA + G   G F+H   DVHLY+NH    +
Sbjct: 263 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYDNHMGGVE 322

Query: 218 LQLSRSP--RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             + R P   + P +I      +L  F++E   +  Y P   I   V+V
Sbjct: 323 ELMKREPPKESDPVVIFPHEWAELDDFKWEGVQVCGYSPLPWIKVPVAV 371


>gi|89512129|gb|ABD73961.1| dihydrofolate reductase [Plasmodium chabaudi adami]
 gi|89512131|gb|ABD73962.1| dihydrofolate reductase [Plasmodium chabaudi adami]
 gi|89512133|gb|ABD73963.1| dihydrofolate reductase [Plasmodium chabaudi chabaudi]
 gi|89512135|gb|ABD73964.1| dihydrofolate reductase [Plasmodium chabaudi chabaudi]
 gi|89512141|gb|ABD73967.1| dihydrofolate reductase [Plasmodium vinckei brucechwatti]
 gi|89512145|gb|ABD73969.1| dihydrofolate reductase [Plasmodium vinckei lentum]
          Length = 172

 Score =  162 bits (409), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+LS+ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         DY    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|125973742|ref|YP_001037652.1| thymidylate synthase [Clostridium thermocellum ATCC 27405]
 gi|256005544|ref|ZP_05430505.1| thymidylate synthase [Clostridium thermocellum DSM 2360]
 gi|281417898|ref|ZP_06248918.1| thymidylate synthase [Clostridium thermocellum JW20]
 gi|125713967|gb|ABN52459.1| thymidylate synthase [Clostridium thermocellum ATCC 27405]
 gi|255990524|gb|EEU00645.1| thymidylate synthase [Clostridium thermocellum DSM 2360]
 gi|281409300|gb|EFB39558.1| thymidylate synthase [Clostridium thermocellum JW20]
 gi|316940064|gb|ADU74098.1| thymidylate synthase [Clostridium thermocellum DSM 1313]
          Length = 276

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 125/235 (53%), Gaps = 4/235 (1%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVS 78
           D T   T   FG   R+DLS+ FP+LT +  + K+ + ELLW  +  SN +  L+ H   
Sbjct: 33  DGTPAHTIKKFGVVNRYDLSEEFPILTLRPTNLKAAIDELLWIWQKKSNNIKDLNSH--- 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD++G +G  YG Q      Y     DQ+  I+  L+ +PYSRR I + +N + +
Sbjct: 90  IWDSWADENGSIGKAYGYQLSIKHKYPEGEFDQVDRIIYDLKHNPYSRRIIANMYNHSDL 149

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            +M L PC     F V   KL+  L QRS DV +   +N+A Y++L  M A V   + GE
Sbjct: 150 HEMNLYPCAYSITFNVTGRKLNAILNQRSQDVLVANNWNVAQYAILVHMFAQVCDLEVGE 209

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            +H + D H+Y+ H       + R+P   P++ INP   D   F+ EDF L  Y+
Sbjct: 210 LVHVIADAHIYDRHIPLVKELIQRTPYPAPKLWINPEKKDFYDFKVEDFVLEDYQ 264


>gi|254973707|ref|ZP_05270179.1| thymidylate synthase [Clostridium difficile QCD-66c26]
 gi|255091097|ref|ZP_05320575.1| thymidylate synthase [Clostridium difficile CIP 107932]
 gi|255312752|ref|ZP_05354335.1| thymidylate synthase [Clostridium difficile QCD-76w55]
 gi|255515512|ref|ZP_05383188.1| thymidylate synthase [Clostridium difficile QCD-97b34]
 gi|255648605|ref|ZP_05395507.1| thymidylate synthase [Clostridium difficile QCD-37x79]
 gi|260681823|ref|YP_003213108.1| thymidylate synthase [Clostridium difficile CD196]
 gi|260685420|ref|YP_003216553.1| thymidylate synthase [Clostridium difficile R20291]
 gi|306518729|ref|ZP_07405076.1| thymidylate synthase [Clostridium difficile QCD-32g58]
 gi|260207986|emb|CBA60142.1| thymidylate synthase [Clostridium difficile CD196]
 gi|260211436|emb|CBE01538.1| thymidylate synthase [Clostridium difficile R20291]
          Length = 276

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 123/228 (53%), Gaps = 2/228 (0%)

Query: 26  TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD 85
           T   F    R+DLSK FP+LT +  + K+ + ELLW  +  SN   ++     IWD WAD
Sbjct: 39  TIKKFCVVNRYDLSKEFPILTLRPTNLKAAIDELLWIWQKKSN--NINDLNSRIWDSWAD 96

Query: 86  KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
           + G +G  YG Q      Y     DQI  ++  L+ +PYSRR I + +N   +++M L P
Sbjct: 97  ETGSIGKAYGYQIGQKHKYKEGEFDQIDRVIYDLKYNPYSRRIITNIYNHNDLNEMNLYP 156

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           C     F V   +L+  L QRS D+ +   +N+  Y++L  MLA +   + GE +H + D
Sbjct: 157 CAYSMTFNVTGNRLNAILNQRSNDILVANNWNVTQYAILVHMLAQISDLEVGELVHVIAD 216

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            H+Y+ H       ++R     P++IINPNI +   FR EDFTL +Y+
Sbjct: 217 AHIYDRHIPLVKELINRESYDAPKLIINPNIKNFYDFRVEDFTLENYK 264


>gi|225568619|ref|ZP_03777644.1| hypothetical protein CLOHYLEM_04696 [Clostridium hylemonae DSM
           15053]
 gi|225162547|gb|EEG75166.1| hypothetical protein CLOHYLEM_04696 [Clostridium hylemonae DSM
           15053]
          Length = 282

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 132/270 (48%), Gaps = 17/270 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ R +I  G+D +         D T   T   FG   R+DLSK FP LT ++   KS
Sbjct: 8   FIDMCRDIIDNGTDTKGEKVRPVWEDGTPAYTVKKFGVVNRYDLSKEFPALTLRRTGIKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
              ELLW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   + DQI  
Sbjct: 68  CTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMGVKHQYKEGMFDQIDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168
           ++  L+ +PYSRR + + +    + +MAL PC     F V   K      L+  L QRS 
Sbjct: 126 VIYDLKHNPYSRRIMTNLYVHQDLHEMALYPCAYSMTFNVTKEKGSDRLTLNGILNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV     +N+  YS+L  MLA V G + GEF+H + D H+Y+ H    +  ++R P   P
Sbjct: 186 DVLAANNWNVCQYSVLLHMLAQVCGMKAGEFVHVIADAHIYDRHIPMIEELIAREPLPAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
              +NP I D   F  +D  L  Y  H  I
Sbjct: 246 AFWLNPEIKDFYEFTRDDVKLIDYNTHEQI 275


>gi|89512151|gb|ABD73972.1| dihydrofolate reductase [Plasmodium yoelii]
 gi|89512153|gb|ABD73973.1| dihydrofolate reductase [Plasmodium yoelii killicki]
 gi|89512155|gb|ABD73974.1| dihydrofolate reductase [Plasmodium yoelii nigeriensis]
 gi|89512157|gb|ABD73975.1| dihydrofolate reductase [Plasmodium yoelii yoelii]
 gi|89512159|gb|ABD73976.1| dihydrofolate reductase [Plasmodium yoelii yoelii]
          Length = 172

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/172 (46%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+L++ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLNQYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         +Y    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMHDNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             +DKMALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDLDKMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|225696043|gb|ACO06797.1| thymidylate synthase [Saimiri sciureus]
          Length = 158

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/158 (49%), Positives = 100/158 (63%), Gaps = 20/158 (12%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89
           FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D            G+
Sbjct: 1   FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGD 60

Query: 90  LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  M
Sbjct: 61  LGPVYGFQWRHFGAEYRDMDSDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           ALPPCH L QFYV NG+LSCQLYQRSGD+ LG+PFNIA
Sbjct: 121 ALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIA 158


>gi|225696033|gb|ACO06792.1| thymidylate synthase [Pan troglodytes]
 gi|225696035|gb|ACO06793.1| thymidylate synthase [Pan paniscus]
          Length = 159

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 20/159 (12%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89
           FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D            G+
Sbjct: 1   FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGD 60

Query: 90  LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGP+YG QWR +         DY G  +DQ+  ++ +++++P  RR I+ AWN   +  M
Sbjct: 61  LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKSNPDDRRIIMCAWNPRDLPLM 120

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIAS
Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIAS 159


>gi|167758813|ref|ZP_02430940.1| hypothetical protein CLOSCI_01156 [Clostridium scindens ATCC 35704]
 gi|167663553|gb|EDS07683.1| hypothetical protein CLOSCI_01156 [Clostridium scindens ATCC 35704]
          Length = 282

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 132/271 (48%), Gaps = 19/271 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ R +I  G+D R         D T   T   FG   R+DLSK FP LT ++   KS
Sbjct: 8   FIDMCRDIIDHGTDTRGEKVRPVWEDGTPAYTIKKFGVVNRYDLSKEFPALTLRRTAIKS 67

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
              ELLW  +  SN +  LH H   IWD WAD+DG +G  YG Q      Y   + DQ+ 
Sbjct: 68  CTDELLWIWQKKSNDIHELHSH---IWDSWADEDGLIGKAYGYQMGVKHKYKEGMFDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS
Sbjct: 125 RVIYDLKHNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEQRSDRLTLNGILNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DV     +N+  Y++L  MLA V   Q GEF+H + D H+Y+ H    +  + R P   
Sbjct: 185 NDVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHVPMIEELIKREPLPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           P+  +NP I D   F   D  L  YE H  I
Sbjct: 245 PKFWLNPEIKDFYQFTRNDVKLIGYETHEQI 275


>gi|225696039|gb|ACO06795.1| thymidylate synthase [Lemur catta]
          Length = 158

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/158 (48%), Positives = 100/158 (63%), Gaps = 20/158 (12%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGE 89
           FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +            +G+
Sbjct: 1   FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRGFLDGLGFSTRGEGD 60

Query: 90  LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  M
Sbjct: 61  LGPVYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLM 120

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           ALPPCH L QFYV NG+LSCQLYQRSGD+ LG+PFNIA
Sbjct: 121 ALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIA 158


>gi|225696041|gb|ACO06796.1| thymidylate synthase [Macaca mulatta]
          Length = 159

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/159 (49%), Positives = 100/159 (62%), Gaps = 20/159 (12%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89
           FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D            G+
Sbjct: 1   FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGD 60

Query: 90  LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  M
Sbjct: 61  LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIAS
Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIAS 159


>gi|642840|gb|AAA62156.1| thymidylate synthase [Bacillus phage beta22]
          Length = 292

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 134/263 (50%), Gaps = 21/263 (7%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVS 78
           D T   T+S    QM+FD +K  P+LT K+V WK+ + E+L F +  +    Y H+H + 
Sbjct: 33  DGTPAYTKSVISTQMKFD-NKEVPILTQKRVAWKTAIKEILAFWKDKEYRFDYFHKHNIH 91

Query: 79  IWDEWADKDGE----LGPIYGVQW-------------RSWPDYDGNVIDQISSIVQSLRA 121
           IWDEW  KDG+    +GP YG Q                 P Y   ++DQ+  ++  L  
Sbjct: 92  IWDEWEIKDGKWKGTIGPSYGYQMGKLVRKGELLDIVHGEPTY--KMLDQVDYLLDQLNT 149

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRRHI S WN+  +D+MAL PC    Q+ V  G L   +   S D+ LG PFN+  Y
Sbjct: 150 NPSSRRHITSLWNIHDLDEMALNPCVWNTQWLVKEGSLHLIVGVPSNDMGLGNPFNVFQY 209

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
            +L  M+A V G++ G     + D H+Y  H E  + Q+S      P + INP I +   
Sbjct: 210 YVLQRMIAQVTGYEIGTLTFNINDAHIYERHIEPLEKQISLPSYPAPILRINPEIKNFYD 269

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           F  +DF L  YE    I  +V++
Sbjct: 270 FTIDDFDLVGYEHGPTISMEVAI 292


>gi|89512125|gb|ABD73959.1| dihydrofolate reductase [Plasmodium berghei]
 gi|89512127|gb|ABD73960.1| dihydrofolate reductase [Plasmodium berghei]
          Length = 172

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+L++ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLNEYFPLLTTKKLFIRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         +Y    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMHDNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|75758390|ref|ZP_00738513.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74494116|gb|EAO57209.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 286

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 134/264 (50%), Gaps = 24/264 (9%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D + + T+  FG   R+DLSK FP  TT+ +  K++  E+ W  R  SN   ++     
Sbjct: 29  EDGSPIATKRIFGVVNRYDLSKEFPAPTTRPLPLKTIFDEVDWIYRKRSN--NVNDMRAK 86

Query: 79  IWDEWA-----------------DKDGELGPIYGVQ-WRSWPDYDGNVIDQISSIVQSLR 120
           IW++WA                 +K G +G  YG Q  +    YD    +Q+  ++  L+
Sbjct: 87  IWNQWAFKKTRLRFSKTFPFVRLEKKGSIGEAYGYQVAKPIFGYD----NQMDYVLGELK 142

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP++RR ++  WNV    +M LPPC    QF+ D  K +  L QRS D      FN+  
Sbjct: 143 RDPFTRRAVIEMWNVDDTGRMNLPPCAHHLQFWSDGKKTNLILKQRSQDFVTANAFNVCE 202

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y++L  M+A  IG + GE +H +GD H+YN H E A+  + R P   P + INP   D  
Sbjct: 203 YAILLHMVARHIGQEVGELLHIIGDCHIYNKHLELAEELVKREPYAAPTLWINPEKTDFY 262

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF  +DF L +Y+ H  +  +V+V
Sbjct: 263 SFTADDFRLENYDKHPQMKIEVAV 286


>gi|160892516|ref|ZP_02073306.1| hypothetical protein CLOL250_00045 [Clostridium sp. L2-50]
 gi|156865557|gb|EDO58988.1| hypothetical protein CLOL250_00045 [Clostridium sp. L2-50]
          Length = 276

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 131/259 (50%), Gaps = 11/259 (4%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R +I+ G             D T   T   FG   R+DLSK FP +T +K + KS
Sbjct: 8   FIEMCRSIIENGYSTEGEKVRPKWEDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTYIKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            + E+LW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   + DQ+  
Sbjct: 68  AIDEILWIWQKKSN--NVHDLKSHIWDSWADEDGSIGKAYGYQMGVKHQYKEGMFDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
           ++  L+ +PYSRR + + +    + +M L PC     F V   +L+  L QRS DV    
Sbjct: 126 LIYDLKHNPYSRRMMTNMYVHEDLHEMNLYPCAYGMTFNVTGDRLNAILNQRSQDVLAAN 185

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
            +N+  Y+ L  M+A V GF+ GE +H + D H+Y+ H       +SR     P+  +NP
Sbjct: 186 NWNVVQYAALVYMIAQVTGFKPGELVHVIADAHIYDRHIPIVKELISRETYPAPKFTMNP 245

Query: 235 NIVDLLSFRYEDFTLRSYE 253
           ++ D   F  +DFT+  Y+
Sbjct: 246 DVKDFYQFTLDDFTIEDYQ 264


>gi|228904773|ref|ZP_04068827.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222]
 gi|228854787|gb|EEM99391.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222]
          Length = 306

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 134/264 (50%), Gaps = 24/264 (9%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D + + T+  FG   R+DLSK FP  TT+ +  K++  E+ W  R  SN   ++     
Sbjct: 49  EDGSPIATKRIFGVVNRYDLSKEFPAPTTRPLPLKTIFDEVDWIYRKRSN--NVNDMRAK 106

Query: 79  IWDEWA-----------------DKDGELGPIYGVQ-WRSWPDYDGNVIDQISSIVQSLR 120
           IW++WA                 +K G +G  YG Q  +    YD    +Q+  ++  L+
Sbjct: 107 IWNQWAFKKTRLRFSKTFPFVRLEKKGSIGEAYGYQVAKPIFGYD----NQMDYVLGELK 162

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP++RR ++  WNV    +M LPPC    QF+ D  K +  L QRS D      FN+  
Sbjct: 163 RDPFTRRAVIEMWNVDDTGRMNLPPCAHHLQFWSDGKKTNLILKQRSQDFVTANAFNVCE 222

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y++L  M+A  IG + GE +H +GD H+YN H E A+  + R P   P + INP   D  
Sbjct: 223 YAILLHMVARHIGQEVGELLHIIGDCHIYNKHLELAEELVKREPYAAPTLWINPEKTDFY 282

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF  +DF L +Y+ H  +  +V+V
Sbjct: 283 SFTADDFRLENYDKHPQMKIEVAV 306


>gi|291244011|ref|XP_002741893.1| PREDICTED: thymidylate synthase-like [Saccoglossus kowalevskii]
          Length = 207

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 123/251 (49%), Gaps = 69/251 (27%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD-----EWAD--- 85
           +RFD+   FPLLTTK+V W+ V  EL+WF++G +N   L    V IWD     E+ D   
Sbjct: 6   LRFDMPDQFPLLTTKRVFWRGVAEELIWFIKGSTNAKELSDKNVHIWDANGSREFLDSRG 65

Query: 86  ----KDGELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
               ++G+LGP+YG QWR +         DY    IDQ+++++++++ +P+ RR I++AW
Sbjct: 66  LQEREEGDLGPVYGFQWRHFGAQYKDMHSDYSNQGIDQLANVIETIKTNPHDRRIIMTAW 125

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   + KMALPPCH   QFYV N +LSCQLYQRS D+    P                  
Sbjct: 126 NPTDLPKMALPPCHAFVQFYVCNDELSCQLYQRSADMIQRTP------------------ 167

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
                                          R  P++ I   I ++  FRYEDF L  Y 
Sbjct: 168 -------------------------------RPFPKLHIKRKIENIDDFRYEDFELEGYS 196

Query: 254 PHAAILAKVSV 264
           PH  I   ++V
Sbjct: 197 PHPKIPMDMAV 207


>gi|225696037|gb|ACO06794.1| thymidylate synthase [Gorilla gorilla]
          Length = 159

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 20/159 (12%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89
           FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D            G+
Sbjct: 1   FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGD 60

Query: 90  LGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  M
Sbjct: 61  LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNI S
Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIXS 159


>gi|325262065|ref|ZP_08128803.1| thymidylate synthase [Clostridium sp. D5]
 gi|324033519|gb|EGB94796.1| thymidylate synthase [Clostridium sp. D5]
          Length = 282

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 132/270 (48%), Gaps = 17/270 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++ + R +I+ G+            D     T   FG   R+DL K FP LT ++   KS
Sbjct: 8   FIGMCRDIIENGTSTEGEKVRPVWEDGAPAYTVKRFGVVNRYDLRKEFPALTLRRTGIKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            V ELLW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   ++DQ+  
Sbjct: 68  CVDELLWIWQKKSN--NIHELNSHIWDSWADEDGSIGKAYGYQMGVKHQYREGMMDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSG 168
           ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS 
Sbjct: 126 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKENNSDKLTLNAILNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV     +N+  Y++L  MLA V G Q GEF+H + D H+Y+ H    +  +SR P   P
Sbjct: 186 DVLAANNWNVCQYAVLVHMLAQVCGMQVGEFVHVIADAHIYDRHIPLIEELISREPFPAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           Q  +NP + D   F  +D  L +YE H  I
Sbjct: 246 QFWLNPEVKDFYDFTTDDVRLDNYETHPQI 275


>gi|153854663|ref|ZP_01995913.1| hypothetical protein DORLON_01909 [Dorea longicatena DSM 13814]
 gi|149752767|gb|EDM62698.1| hypothetical protein DORLON_01909 [Dorea longicatena DSM 13814]
          Length = 282

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 135/271 (49%), Gaps = 19/271 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R +I  G+D R         D T   T   FG   R+DLSK FP LT ++   KS
Sbjct: 8   FINMCRDIIDNGTDTRGEKVRPVWEDGTPAYTIKKFGVVNRYDLSKEFPALTLRRTAIKS 67

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
              ELLW  +  SN ++ LH H   IWD WAD++G +G  YG Q      Y   + DQ+ 
Sbjct: 68  CTDELLWIWQQKSNNINDLHSH---IWDSWADENGSIGKAYGYQMGVKHQYKEGMFDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS
Sbjct: 125 RVIYDLKNNPYSRRIMTNIYVHEDLHEMNLYPCAYSMTFNVTKKPGHDKLTLNAILNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DV     +N+  Y++L  MLA V   + GEF+H + D H+Y+ H    +  +SR P   
Sbjct: 185 NDVLAANNWNVCQYAVLIHMLAQVCDMEVGEFVHVIADAHIYDRHVPMIEELISRKPLPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           P+  +NP + D   F  +D  L  Y+ H  I
Sbjct: 245 PKFWLNPEVKDFYQFTRDDVKLIDYQTHDQI 275


>gi|225027000|ref|ZP_03716192.1| hypothetical protein EUBHAL_01256 [Eubacterium hallii DSM 3353]
 gi|224955685|gb|EEG36894.1| hypothetical protein EUBHAL_01256 [Eubacterium hallii DSM 3353]
          Length = 276

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 122/234 (52%), Gaps = 2/234 (0%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D T   T   FG   R+DLSK FP +T +K + +S + E+LW  +  SN   +H     I
Sbjct: 33  DGTYAYTIKKFGVVNRYDLSKEFPAITLRKTYIRSAIDEILWIWQKKSN--NVHDLSSHI 90

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           WDEWAD+DG +G  YG Q      Y    +DQ+  ++  L+ +P+SRR + + +    + 
Sbjct: 91  WDEWADEDGSIGKAYGYQLGKKHKYKEGEMDQVDRVLFDLKENPFSRRIMTNIYVHEDLH 150

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
           +M L PC     F V   +L+  L QRS D+     +N+  Y+ L MM A V GF+ GE 
Sbjct: 151 EMNLYPCAYSMTFNVTGNRLNAILNQRSQDILAANNWNVVQYAALLMMFAQVSGFEPGEL 210

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
           +H + D H+Y+ H       + R     P++ +NP + D   F  +DFT+  YE
Sbjct: 211 VHVIADAHIYDRHIPIVKELIQRPVYPAPKVTLNPEVKDFYKFTVDDFTIEDYE 264


>gi|295094923|emb|CBK84014.1| thymidylate synthase [Coprococcus sp. ART55/1]
          Length = 276

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 123/235 (52%), Gaps = 2/235 (0%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D T   T   FG   R+DLSK FP +T +K + KS + ELLW  +  SN   +H     
Sbjct: 32  EDGTYAYTIKRFGVVNRYDLSKEFPAITLRKTYVKSAIDELLWIWQKKSN--NVHDLKSH 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD++G +G  YG Q      Y   ++DQ+  ++  L+ +PYSRR + + +    +
Sbjct: 90  IWDSWADENGSIGKAYGYQLGVKHKYKEGMMDQVDRLIYDLKNNPYSRRMLTNIYVHQDL 149

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            +M L PC     F V   +L+  L QRS DV     +N+  Y++L  MLA V GF+ GE
Sbjct: 150 SEMNLYPCAYSMTFNVTGDRLNAILNQRSQDVLAANNWNVVQYAVLVHMLAQVTGFKPGE 209

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            +H + D H+Y+ H       ++R     P+  +NP++ D   F  +DF +  YE
Sbjct: 210 LVHVIADAHIYDRHIPIVKELITRPTHPAPRFYMNPDVKDFYDFTLDDFRIEDYE 264


>gi|197303683|ref|ZP_03168720.1| hypothetical protein RUMLAC_02412 [Ruminococcus lactaris ATCC
           29176]
 gi|197297203|gb|EDY31766.1| hypothetical protein RUMLAC_02412 [Ruminococcus lactaris ATCC
           29176]
          Length = 301

 Score =  155 bits (392), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 133/270 (49%), Gaps = 17/270 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R +I+ G+            D T   T   FG   R+DLSK FP LT ++   KS
Sbjct: 27  FINMCRDIIENGTSTEGEKVRPKWEDGTAAYTIKKFGVVNRYDLSKEFPALTLRRTAIKS 86

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            V ELLW  +  SN   +H     IWD WAD++G +G  YG Q +    Y   ++DQ+  
Sbjct: 87  CVDELLWIWQKKSN--NVHELKSHIWDSWADENGSIGKAYGYQMQVKHQYKEGMMDQVDR 144

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY------QRSG 168
           ++  L+ +PYSRR + + +    + +M L PC     F V   + S QL       QRS 
Sbjct: 145 VLYDLKENPYSRRIMTNLYVHEDLHEMNLYPCAYSMTFNVTKEEGSEQLTLNGILNQRSQ 204

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV     +N+  Y++L  M A V G + GE +H + D H+Y+ H    +  +SR P   P
Sbjct: 205 DVLTANNWNVCQYAVLLHMFAQVCGMKAGELVHVIADAHIYDRHIPLIEELISREPLPAP 264

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           +  +NP + D   F  +D  L  YE H  I
Sbjct: 265 KFWLNPEVKDFYDFTPDDVRLEDYETHPQI 294


>gi|163815127|ref|ZP_02206508.1| hypothetical protein COPEUT_01283 [Coprococcus eutactus ATCC 27759]
 gi|158449536|gb|EDP26531.1| hypothetical protein COPEUT_01283 [Coprococcus eutactus ATCC 27759]
          Length = 294

 Score =  155 bits (391), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 121/227 (53%), Gaps = 2/227 (0%)

Query: 26  TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD 85
           T   FG   R+DLSK FP +T +K + KS + ELLW  +  SN   +H     IWD WAD
Sbjct: 57  TIKKFGVVNRYDLSKEFPAITLRKTYIKSAIDELLWIWQKKSN--NVHDLKSHIWDSWAD 114

Query: 86  KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
           ++G +G  YG Q      Y   ++DQ+  ++  L+ +PYSRR + + +    + +M L P
Sbjct: 115 ENGSIGKAYGYQLGVKHQYKEGMMDQVDRLLYDLKNNPYSRRMMTNIYVHQDLHEMNLYP 174

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           C     F V   +L+  L QRS DV     +N+  Y+ L  M+A V GF+ GE +H + D
Sbjct: 175 CAYSMTFNVTGDRLNAILNQRSQDVLTANNWNVVQYAALVYMIAQVTGFKPGELVHVIAD 234

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
            H+Y+ H       + R     P++I+NP++ D   F  +DFT+  Y
Sbjct: 235 AHIYDRHIPLVKELIKRPTYPAPKVILNPDVKDFYDFTVDDFTIEDY 281


>gi|317502048|ref|ZP_07960230.1| thymidylate synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090436|ref|ZP_08339317.1| thymidylate synthase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896522|gb|EFV18611.1| thymidylate synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401183|gb|EGG80776.1| thymidylate synthase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 282

 Score =  155 bits (391), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 131/271 (48%), Gaps = 19/271 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ R +I  G+            D T   T   FG   R+DLSK FP LT ++   KS
Sbjct: 8   FIDMCRDIIDNGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLSKEFPALTLRRTAIKS 67

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            V ELLW  +  SN V+ L  H   IWD WAD+ G +G  YG Q      Y    +DQ  
Sbjct: 68  CVDELLWIWQKKSNNVNELKSH---IWDSWADETGSIGKAYGYQMGVKHQYKEGRMDQTD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V   K      L+  L QRS
Sbjct: 125 RVIFDLKNNPYSRRIMTNIYVHNDLHEMHLYPCAYSMTFNVTKEKDSEKLTLNAILNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DV     +N+  Y++L  MLA V G + GEF+H + D H+Y+ H    +  +SR P   
Sbjct: 185 QDVLAANNWNVCQYAVLVHMLAQVCGMKAGEFVHVIADAHIYDRHVPMIEELISREPLPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           P   +NP I D   F  +D  L  YE H  I
Sbjct: 245 PTFWLNPEITDFYDFTPDDVRLDRYETHPQI 275


>gi|153816112|ref|ZP_01968780.1| hypothetical protein RUMTOR_02359 [Ruminococcus torques ATCC 27756]
 gi|145846597|gb|EDK23515.1| hypothetical protein RUMTOR_02359 [Ruminococcus torques ATCC 27756]
          Length = 297

 Score =  155 bits (391), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 131/271 (48%), Gaps = 19/271 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ R +I  G+            D T   T   FG   R+DLSK FP LT ++   KS
Sbjct: 23  FIDMCRDIIDNGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLSKEFPALTLRRTAIKS 82

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            V ELLW  +  SN V+ L  H   IWD WAD+ G +G  YG Q      Y    +DQ  
Sbjct: 83  CVDELLWIWQKKSNNVNELKSH---IWDSWADETGSIGKAYGYQMGVKHQYKEGRMDQTD 139

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V   K      L+  L QRS
Sbjct: 140 RVIFDLKNNPYSRRIMTNIYVHNDLHEMHLYPCAYSMTFNVTKEKDSEKLTLNAILNQRS 199

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DV     +N+  Y++L  MLA V G + GEF+H + D H+Y+ H    +  +SR P   
Sbjct: 200 QDVLAANNWNVCQYAVLVHMLAQVCGMKAGEFVHVIADAHIYDRHVPMIEELISREPLPA 259

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           P   +NP I D   F  +D  L  YE H  I
Sbjct: 260 PTFWLNPEITDFYDFTPDDVRLDRYETHPQI 290


>gi|297821349|ref|XP_002878557.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297324396|gb|EFH54816.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 490

 Score =  155 bits (391), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 141/263 (53%), Gaps = 28/263 (10%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L++++I  G    D     T + FG QMRF+L K FPLLTTKKV W  VV E+L  +
Sbjct: 236 YLNLIQNIISSG----DMNDNNTLTKFGCQMRFNLRKTFPLLTTKKVFWLGVVEEILQLI 291

Query: 64  RGDSNVSYLHRHGVSIWD-------------EWADKDGELGPIYGVQWRSWPDYDGNVI- 109
            G  N       G +IWD                ++DG+   +YG+QW+     D  +I 
Sbjct: 292 SGSINP---MEKGSNIWDSDEANEYLNSFGVNATEEDGDHQHLYGLQWKH---TDARLIV 345

Query: 110 ---DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
               Q+S ++  ++ +P+++R ++SA N + + K+++ PC    QFYV NG+LS Q+YQ 
Sbjct: 346 QKFSQLSDVINKIKNNPHNQRIMLSACNPSDL-KLSVSPCQTFAQFYVANGELSSQIYQS 404

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S +  + IPF+I +YSLLT ++A V     G+FI+ +G   +     +    QL  SP+ 
Sbjct: 405 STEASIEIPFSITTYSLLTCIIAHVCDLVAGDFIYVIGQARINKARVKAIQKQLQISPKP 464

Query: 227 LPQMIINPNIVDLLSFRYEDFTL 249
            P + INP    + +F   D  L
Sbjct: 465 FPILKINPEKKKMDNFEASDLEL 487


>gi|34485973|gb|AAM75815.2| thymidylate synthase [Corallochytrium limacisporum]
          Length = 207

 Score =  154 bits (390), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 79/167 (47%), Positives = 103/167 (61%), Gaps = 21/167 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  +I  GS + DRTG GT S FG QMRF L    FPLLTTK+V W+ V  ELL
Sbjct: 41  RQYLELVEKIINEGSRKGDRTGTGTLSIFGAQMRFSLRDDIFPLLTTKRVFWRGVAEELL 100

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWRSW------- 101
           WF+ GD+N   L    V IWD     E+ D       ++G+LGP+YG QWR +       
Sbjct: 101 WFVSGDTNAKTLSDKNVKIWDANGSREFLDNRGLTDREEGDLGPVYGFQWRHFGAEYTTM 160

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCH 147
             DY G  +DQ++ ++Q+L+ +P  RR I+SAWN A + KMALPPCH
Sbjct: 161 HDDYTGKGVDQLAEVIQTLQENPNCRRMIISAWNPADLPKMALPPCH 207


>gi|154505857|ref|ZP_02042595.1| hypothetical protein RUMGNA_03398 [Ruminococcus gnavus ATCC 29149]
 gi|153793875|gb|EDN76295.1| hypothetical protein RUMGNA_03398 [Ruminococcus gnavus ATCC 29149]
          Length = 272

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 125/246 (50%), Gaps = 8/246 (3%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D T   T   FG   R+DLSK FP LT ++   KS V E+LW  +  SN   +H     
Sbjct: 22  EDGTSAYTIKKFGIVNRYDLSKEFPALTLRRTGIKSCVDEMLWIWQKKSN--NIHDLNSH 79

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD+DG +G  YG Q +    Y   ++DQ+  ++  L+ +PYSRR + + +    +
Sbjct: 80  IWDSWADEDGSIGKAYGYQMQVKHQYKEGMMDQVDRVIYDLKNNPYSRRIMTNIYVHQDL 139

Query: 139 DKMALPPCHCLFQFYV----DNGKLSCQ--LYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            +M L PC     F V    D+ KL+    L QRS DV     +N+  Y++L  MLA V 
Sbjct: 140 HEMNLYPCAYSMTFNVTKEKDSDKLTLNGILNQRSQDVLAANNWNVCQYAVLLHMLAQVC 199

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
             + GEF+H + D H+Y+ H    +  + R P   P+  +NP + D   F  +D  L  Y
Sbjct: 200 DMKVGEFVHVIADAHIYDRHIPMIEELIKREPLPAPKFWLNPEVKDFYEFTPDDVRLDGY 259

Query: 253 EPHAAI 258
           E H  I
Sbjct: 260 ETHPQI 265


>gi|166031149|ref|ZP_02233978.1| hypothetical protein DORFOR_00834 [Dorea formicigenerans ATCC
           27755]
 gi|166028996|gb|EDR47753.1| hypothetical protein DORFOR_00834 [Dorea formicigenerans ATCC
           27755]
          Length = 291

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 17/270 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ R +I  G+D R         D+T   T   F    R+DLSK FP LT ++   KS
Sbjct: 17  FIDMCRDIIDNGTDTRGEKVRPVWEDKTPAYTVKKFCVVNRYDLSKEFPALTLRRTAIKS 76

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
              ELLW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   + DQ+  
Sbjct: 77  CTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMSVKHQYKEGMFDQVDR 134

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168
           ++  L+ +PYSRR + + +    + +M L PC     F V   +      L+  L QRS 
Sbjct: 135 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKEGHEKLSLNGMLNQRSN 194

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV     +N+  Y++L  MLA V   + GE +H + D H+Y+ H    +  + R P   P
Sbjct: 195 DVLTANNWNVCQYAVLLHMLAQVCDMEVGELVHVIADAHIYDRHIPLVEELIKREPLPAP 254

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           +  +NP + +   F  +D  L  YE H  I
Sbjct: 255 KFWLNPEVKNFYDFTPDDVKLIDYETHEQI 284


>gi|119622123|gb|EAX01718.1| thymidylate synthetase, isoform CRA_c [Homo sapiens]
          Length = 135

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 71/135 (52%), Positives = 92/135 (68%)

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           + AWN   +  MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A
Sbjct: 1   MCAWNPRDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIA 60

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
            + G + G+FIHTLGD H+Y NH E   +QL R PR  P++ I   +  +  F+ EDF +
Sbjct: 61  HITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQI 120

Query: 250 RSYEPHAAILAKVSV 264
             Y PH  I  +++V
Sbjct: 121 EGYNPHPTIKMEMAV 135


>gi|266624663|ref|ZP_06117598.1| thymidylate synthase [Clostridium hathewayi DSM 13479]
 gi|288863469|gb|EFC95767.1| thymidylate synthase [Clostridium hathewayi DSM 13479]
          Length = 276

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 121/238 (50%), Gaps = 2/238 (0%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D T   T   FG   R+DLSK FP+LT ++  +KS + ELLW  +  SN   +H     
Sbjct: 32  EDGTPAHTIKKFGIINRYDLSKEFPILTLRRTAFKSAIDELLWIWQKKSN--NIHDLNSH 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD+ G +G  YG Q      Y     DQ+  ++  L+ +P SRR + + +N   +
Sbjct: 90  IWDSWADETGSIGKAYGYQLGIRYQYKEGEFDQVDRVLFDLKHNPLSRRIMTNLYNHQDL 149

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            +M L PC     F V    L+  L QRS D+     +N+  Y++L  M ASV G Q GE
Sbjct: 150 HEMNLYPCAYSMTFNVSGNVLNGILNQRSQDMLTANNWNVTQYAVLLHMFASVSGLQAGE 209

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
            +H + D H+Y+ H       + ++P   P+ I+ P I D  SF  + F L  Y+ HA
Sbjct: 210 LVHVIADAHIYDRHVPIVKEMIEKTPYDAPKFIMGPEIHDFYSFTKDSFRLEDYQYHA 267


>gi|218133162|ref|ZP_03461966.1| hypothetical protein BACPEC_01024 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992035|gb|EEC58039.1| hypothetical protein BACPEC_01024 [Bacteroides pectinophilus ATCC
           43243]
          Length = 275

 Score =  152 bits (384), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 126/240 (52%), Gaps = 4/240 (1%)

Query: 26  TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWA 84
           T   FG   R+DLS+ FP++T ++  +KS + E+LW  +  SN +  L+ H   IWDEWA
Sbjct: 39  TIKKFGVVNRYDLSREFPIMTLRRTAFKSCIDEILWIWQKKSNNIKDLNSH---IWDEWA 95

Query: 85  DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144
           D++G +G  YG Q      Y   ++DQ+  ++  L+ +PYSRR + + +    + +M L 
Sbjct: 96  DENGSIGKAYGYQLGVRHQYKEGMMDQVDRVLYDLKNNPYSRRIMTNIYVHQDLHEMNLY 155

Query: 145 PCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204
           PC     F V   KL+  L QRS D+     +N+  Y++L  M+A V G + GE +H + 
Sbjct: 156 PCAYSMTFNVTGNKLNAILNQRSNDILTANNWNVVQYAVLVHMIAQVSGLEAGELVHVIA 215

Query: 205 DVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           D H+Y+ H       + R     P   +NP++ D   F  +DF L  Y+    I   V+V
Sbjct: 216 DAHIYDRHIPLVKELIKRQTYDAPVFRMNPDVKDFYEFTVDDFELEDYKYGTQIKIPVAV 275


>gi|309797905|ref|ZP_07692286.1| thymidylate synthase [Escherichia coli MS 145-7]
 gi|308118513|gb|EFO55775.1| thymidylate synthase [Escherichia coli MS 145-7]
          Length = 316

 Score =  152 bits (384), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 140/309 (45%), Gaps = 87/309 (28%)

Query: 43  PLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP 102
           PL++ K V+ K ++ EL W+L+G  N+ +L  +GV IWD WAD++G+LGP+YG QWR W 
Sbjct: 8   PLISGKAVNLKPLLVELEWYLKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWE 67

Query: 103 D-------------------------YDG---------NVIDQISSIVQSLRADPYSRRH 128
           D                         Y G           IDQ+  IV +LR +P  RR 
Sbjct: 68  DTRIVSHSEYLSKIATFRERGYKVEGYLGISEDRVVLSREIDQLQRIVDTLRMNPTDRRI 127

Query: 129 IVSAWNVALIDKMALPPCHCLFQFY----------------------------------- 153
           +++AWNV  ++ M LPPCH +F  +                                   
Sbjct: 128 MLNAWNVGELEDMKLPPCHFVFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLYD 187

Query: 154 --VDNGKLSCQ--------------LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             +D      +              L QRS D F+G+PFNIA Y +LT  LA + G   G
Sbjct: 188 LEIDGSVTEAELDELGIPKRILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAG 247

Query: 198 EFIHTLGDVHLYNNHFEQ-ADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPH 255
            F+H   DVHLYNNH E   +L   ++P     ++I PN   +L  F++++  +  Y P 
Sbjct: 248 AFVHFGFDVHLYNNHMEGVCELMQRQAPEHSDPVVIFPNEWSELDDFKWDEILILGYAPL 307

Query: 256 AAILAKVSV 264
             I   V+V
Sbjct: 308 PWIKVPVAV 316


>gi|167745365|ref|ZP_02417492.1| hypothetical protein ANACAC_00056 [Anaerostipes caccae DSM 14662]
 gi|317473091|ref|ZP_07932390.1| thymidylate synthase [Anaerostipes sp. 3_2_56FAA]
 gi|167655086|gb|EDR99215.1| hypothetical protein ANACAC_00056 [Anaerostipes caccae DSM 14662]
 gi|316899429|gb|EFV21444.1| thymidylate synthase [Anaerostipes sp. 3_2_56FAA]
          Length = 282

 Score =  152 bits (384), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 134/270 (49%), Gaps = 17/270 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R +++ G+            D T   T   FG   R+DLSK FP LT +K   KS
Sbjct: 8   FINMCRDILENGTSTEGEKVRPKWPDGTPAYTIKQFGVVNRYDLSKEFPALTLRKTFVKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            V ELLW  +  SN   +H     +WDEWAD+DG +G  YG Q R    Y   ++DQ+  
Sbjct: 68  AVDELLWIWQRKSN--NIHDLKSHVWDEWADEDGSIGKAYGYQMRVKHQYAEGMMDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168
           ++  L+ +PYSRR + + +    + +M L PC     F V          L+  L QRS 
Sbjct: 126 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKPGHEKLVLNGILNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+     +N+  YS+L  MLA V G + GEF+H + D H+Y+ H    +  + R     P
Sbjct: 186 DILAANNWNVVQYSVLLYMLAQVCGMEPGEFVHVIADAHIYDRHIPIIEELIKRPVYDAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           +  +NP++ D   F  +DF +  Y+    I
Sbjct: 246 KFSMNPDVKDFYEFTLDDFKIEDYKAGEQI 275


>gi|18656511|gb|AAL77812.1|AF389451_19 thymidylate synthase [Tiger frog virus]
          Length = 124

 Score =  152 bits (384), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 88/124 (70%)

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
           MA+PPCH + QFYV +G+LSC LYQRSGD+ LG PFNIASYSLLT M+A V G + GEF+
Sbjct: 1   MAIPPCHAMCQFYVSDGELSCHLYQRSGDMGLGAPFNIASYSLLTYMMAHVTGLEPGEFV 60

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260
           HTLGD H+Y +H E    QL R PR  P + IN ++  L  F+ EDF+L  Y+PH  I  
Sbjct: 61  HTLGDAHVYLDHVEPLKTQLEREPRPFPTLRINRSVESLDDFKAEDFSLEGYDPHPTIKM 120

Query: 261 KVSV 264
           +++V
Sbjct: 121 RMAV 124


>gi|319645688|ref|ZP_07999919.1| thymidylate synthase [Bacillus sp. BT1B_CT2]
 gi|317392235|gb|EFV73031.1| thymidylate synthase [Bacillus sp. BT1B_CT2]
          Length = 283

 Score =  151 bits (382), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 131/247 (53%), Gaps = 2/247 (0%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRHGV 77
           D T   T   FG    +DL K FP+ T +   +KS + E+LW  +  SN   L   ++GV
Sbjct: 37  DDTPAYTLKCFGVLNEYDLQKEFPIATLRPTAFKSGLKEILWIYQDKSNDVQLLEEKYGV 96

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             W  WA++DG LG  YG Q +    Y     +QI  ++  L+ +PYSRR I + +N   
Sbjct: 97  KYWRSWANEDGNLGLAYGRQMQYKHKYKEGYFNQIDRLIWDLKNNPYSRRIITNLYNHQD 156

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           +  M L PC  L  +      L+  L QRS D  +    N+  Y+LL  M+A V G++ G
Sbjct: 157 LHGMTLYPCAFLTMWDYGGEFLNMTLVQRSSDYLVAGNINVTQYALLQHMIAQVCGYKPG 216

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           +F H + ++H+Y+ H EQA   ++R   T P+++I+ +I +   ++ E F L  Y PH+ 
Sbjct: 217 KFHHYINNLHIYDRHIEQAKEIINRESLTAPKLVIDNSIKNFYDYKPEHFILEGYRPHSQ 276

Query: 258 ILAKVSV 264
           I  +V++
Sbjct: 277 IKLEVAL 283


>gi|330004215|ref|ZP_08304841.1| thymidylate synthase [Klebsiella sp. MS 92-3]
 gi|328536732|gb|EGF63053.1| thymidylate synthase [Klebsiella sp. MS 92-3]
          Length = 363

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 146/349 (41%), Gaps = 88/349 (25%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLWF 62
           Y  +L      G    +RTG  T  T     ++ L     PL+++K V+ K ++ EL W+
Sbjct: 15  YACVLAEAASSGIKSDNRTGTPTIGTCYVNSQYPLWGAAVPLISSKAVNLKPLLVELEWY 74

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD------YD----------- 105
           L+G  +V++L  H V IW+ W  +DG LGP+YG QWR W D      YD           
Sbjct: 75  LKGTGDVAFLREHDVKIWEAWTREDGTLGPVYGKQWRRWNDTRIVDRYDFVKNYQSYLYR 134

Query: 106 -----------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
                               IDQ+  IV  LR DP  RR ++SAWNV  ++ MALPPCH 
Sbjct: 135 GYKTEGYIGVEEDRVVLSREIDQLQRIVDKLRRDPTDRRIMMSAWNVGELEDMALPPCHF 194

Query: 149 LFQFY---------------------------------------------------VDNG 157
           ++  +                                                   +   
Sbjct: 195 MYHVWSRELGFEERLRQANAIGEVHAKYLHESRYTALLAEIARCGEASEEMLDSLNIPRR 254

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
            L   + QRS DVF+G+PFNIA Y +LT ++A V       F H   DVH+Y NH    +
Sbjct: 255 ALCSAMIQRSVDVFVGMPFNIAGYGILTSLIAQVTNHMPMMFSHFGLDVHVYENHMSGVN 314

Query: 218 LQLSRS-PRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             + R  P     ++I P    ++  FR++D  +  Y PH  I   V+V
Sbjct: 315 EMMDRDIPENSDPVVIFPESWKEIDDFRWQDVRIEGYAPHPWIKVPVAV 363


>gi|332652454|ref|ZP_08418199.1| thymidylate synthase [Ruminococcaceae bacterium D16]
 gi|332517600|gb|EGJ47203.1| thymidylate synthase [Ruminococcaceae bacterium D16]
          Length = 276

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 123/237 (51%), Gaps = 2/237 (0%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D T   T   FG   R+DL K FP++T +K   KS V ELLW  +  SN   +H+    
Sbjct: 32  EDGTPAHTIKLFGVVNRYDLRKEFPIITVRKQFLKSAVDELLWIWQKKSND--VHQLSSH 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD++G +G  YG Q      Y    +DQ+  ++  L+ DP SRR + + +N   +
Sbjct: 90  IWDAWADENGTIGKAYGYQLGVKHHYPQGDMDQVDKVLWDLKHDPGSRRILTNLYNHHDL 149

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            +MAL PC     F V    L+  L QRS D+     +N+  Y++L  M A V G + GE
Sbjct: 150 SEMALYPCAYSMTFNVSGNTLNGILNQRSQDMLTANGWNVMQYAVLLHMFAQVSGLEAGE 209

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
            +H + D H+Y+ H    +  ++R P   P+ I++ ++ D  +F  + F L  Y+ H
Sbjct: 210 LVHVIADAHIYDRHVPIVEEIIARQPYDAPKFIMDKSVTDFYAFTKDSFRLEGYQAH 266


>gi|331086111|ref|ZP_08335194.1| thymidylate synthase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330407034|gb|EGG86539.1| thymidylate synthase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 282

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 17/265 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R +I  G+            D +   T   FG   R+DLSK FP LT ++   KS
Sbjct: 8   FIEMCRDIIDNGTSTEGEKVRPKWEDGSYAYTIKKFGVVNRYDLSKEFPALTLRRTGIKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            V E+LW  +  SN   +H     IWD WAD+DG +G  YG Q +    Y   ++DQ+  
Sbjct: 68  CVDEMLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMQVKHQYREGMMDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DNGKLSCQ--LYQRSG 168
           ++  L+ +PYSRR + + +    + +M L PC     F V    D+ KL     L QRS 
Sbjct: 126 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKREDSEKLVLNGILNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV     +N+  Y++L  MLA V   Q GEF+H + D H+Y+ H    +  + R P   P
Sbjct: 186 DVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHIPLIEELIKREPLPAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYE 253
           +  +NP+I D  +F  ED  L  Y+
Sbjct: 246 KFWLNPDIKDFYAFTPEDVRLDDYQ 270


>gi|325662312|ref|ZP_08150921.1| thymidylate synthase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471314|gb|EGC74537.1| thymidylate synthase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 282

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 17/265 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R +I  G+            D +   T   FG   R+DLSK FP LT ++   KS
Sbjct: 8   FIEMCRDIIDNGTSTEGEKVRPKWEDGSYAYTIKKFGVVNRYDLSKEFPALTLRRTGIKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            V E+LW  +  SN   +H     IWD WAD+DG +G  YG Q +    Y   ++DQ+  
Sbjct: 68  CVDEMLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMQVKHQYREGMMDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DNGKLSCQ--LYQRSG 168
           ++  L+ +PYSRR + + +    + +M L PC     F V    D+ KL     L QRS 
Sbjct: 126 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKREDSEKLVLNGILNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV     +N+  Y++L  MLA V   Q GEF+H + D H+Y+ H    +  + R P   P
Sbjct: 186 DVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHIPLIEELIKREPLPAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYE 253
           +  +NP+I D  +F  ED  L  Y+
Sbjct: 246 KFWLNPDIKDFYAFTPEDVRLDDYQ 270


>gi|153810935|ref|ZP_01963603.1| hypothetical protein RUMOBE_01325 [Ruminococcus obeum ATCC 29174]
 gi|149832823|gb|EDM87906.1| hypothetical protein RUMOBE_01325 [Ruminococcus obeum ATCC 29174]
          Length = 282

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 133/266 (50%), Gaps = 19/266 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R VI+ G+            D T   T   FG   R+DL K FP LT ++   KS
Sbjct: 8   FINMCRDVIENGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLRKEFPALTLRRTALKS 67

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + E+LW  +  SN +  LH H   IWD WAD++G +G  YG Q      Y   ++DQ+ 
Sbjct: 68  AMDEILWIWQKKSNNIKDLHSH---IWDSWADENGSIGKAYGYQLGVKHQYKEGMMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS
Sbjct: 125 RVLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLTLNAILNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  YS+L MM+A V   + GE +H + D H+Y+ H       +SR+P   
Sbjct: 185 QDILAANNWNVCQYSILLMMIAQVCDMEAGELVHVIADCHIYDRHVPVIKELISRTPYPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYE 253
           P + +NP I D   F  +D  + +Y+
Sbjct: 245 PTVKLNPEIRDFYEFTTDDLIVENYQ 270


>gi|327198463|ref|YP_004327051.1| putative thymidylate synthase [Erwinia phage phiEa104]
 gi|311875159|emb|CBX44419.1| putative thymidylate synthase [Erwinia phage phiEa104]
          Length = 311

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 129/261 (49%), Gaps = 39/261 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY     +++  G  R  R+G      F   +R D+ K FPLLT K V    V  ELLW
Sbjct: 6   QQYKAFTANILSNGELRHSRSGNTISVPFPEDLRIDVRKEFPLLTCKSVPMSLVAGELLW 65

Query: 62  FLRGDSNVSYLHRHGV-------SIWD---------------------------EWADKD 87
           FL G +++  L  +         +IW                               D  
Sbjct: 66  FLAGKTDLHSLRMYQFGSDEGQNTIWTADYERYSKAVKSLIRKVQTGELQEKTLRKIDAQ 125

Query: 88  GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN-VALIDKM-ALPP 145
            +LG IYG QWR +   D    DQI+ ++Q ++ +P SR HIVSAWN VA+ + + ALPP
Sbjct: 126 EDLGMIYGSQWREFESCD-TTCDQITRLIQGIKENPASRYHIVSAWNPVAVANNLGALPP 184

Query: 146 CHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204
           CH  FQ Y  + G +  + YQRS D FLG+PFNIASY+LL  +LA + G+     I + G
Sbjct: 185 CHMFFQVYASEGGYMDLRWYQRSVDTFLGLPFNIASYALLLRILAQMTGYTARYVIGSFG 244

Query: 205 DVHLYNNHFEQADLQLSRSPR 225
           D H+Y NH   A +Q+  +P 
Sbjct: 245 DAHIYENHVP-AVMQMMDNPE 264


>gi|295107966|emb|CBL21919.1| thymidylate synthase [Ruminococcus obeum A2-162]
          Length = 282

 Score =  149 bits (375), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 19/266 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ + VI+ G+            D T   T   FG   R+DL + FP LT +K   KS
Sbjct: 8   FINMCKDVIENGTSTEGEKVRPVWEDGTPAYTIKRFGVVNRYDLREEFPALTLRKTALKS 67

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + E+LW  +  SN +  LH H   IWD WAD++G +G  YG Q +    Y   ++DQ+ 
Sbjct: 68  AMDEILWIWQKKSNNIHDLHSH---IWDSWADENGSIGKAYGYQLQVKHQYKEGMMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS
Sbjct: 125 RVLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLTLNAVLNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  YS+L MM+A V G + GE +H + D H+Y+ H       +SR+P   
Sbjct: 185 QDILAANNWNVCQYSILLMMIAQVCGMEAGELVHVIADCHIYDRHVPVIKELISRTPYPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYE 253
           P + +NP I +   F  +D  + +Y+
Sbjct: 245 PTVRLNPEIKNFYDFTTDDLIVENYQ 270


>gi|291545325|emb|CBL18433.1| thymidylate synthase [Ruminococcus sp. SR1/5]
          Length = 282

 Score =  149 bits (375), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 19/266 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ + VI+ G+            D T   T   FG   R+DL K FP LT +K   KS
Sbjct: 8   FIDMCKDVIENGTSTEGEKVRPVWEDGTPAYTIKRFGVVNRYDLRKEFPALTLRKTALKS 67

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + E+LW  +  SN +  LH H   IWD WAD++G +G  YG Q      Y   ++DQ+ 
Sbjct: 68  AMDEILWIWQQKSNNIHDLHSH---IWDSWADENGSIGKAYGYQLGVKHQYKEGMMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS
Sbjct: 125 RVLFDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLVLNAVLNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  YSLL MM+A     + GE +H + D H+Y+ H       +SR P   
Sbjct: 185 QDILAANNWNVCQYSLLLMMIAQACDMEAGELVHVIADCHIYDRHIPVIKELISRKPYPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYE 253
           P + +NP I D   F  +D  + +YE
Sbjct: 245 PTVKLNPEIKDFYKFTTDDLIVENYE 270


>gi|258513542|ref|YP_003189764.1| thymidylate synthase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777247|gb|ACV61141.1| thymidylate synthase [Desulfotomaculum acetoxidans DSM 771]
          Length = 276

 Score =  149 bits (375), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/233 (34%), Positives = 122/233 (52%), Gaps = 2/233 (0%)

Query: 26  TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD 85
           T   F    R++LS+ FP+LT +  + K+ + ELLW  +  SN   ++    SIWD WA+
Sbjct: 39  TIKRFAVVNRYNLSEEFPILTLRPTNLKAAIDELLWIWQKKSN--NINDLNSSIWDSWAN 96

Query: 86  KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
            +G +G  YG Q      Y     DQ+  I+  LR  PYSRR I + +N + + +M L P
Sbjct: 97  DEGSIGKAYGYQLGIKHKYREGEFDQVDRILYDLRHTPYSRRIIANMYNHSDLHEMNLYP 156

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           C     F V   KL+  L QRS DV +   +N+A Y++L  M A V  F+ GEF+H + D
Sbjct: 157 CAYSMTFNVTGRKLNAILNQRSQDVLVANNWNVAQYAILIHMFAQVSSFEAGEFVHVIAD 216

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
            H+Y+ H       + R+    P+++INP+      F  +DF L  Y+ +  I
Sbjct: 217 AHIYDRHIPIIKELIQRTSYPAPRLLINPDKKHFYDFTVDDFLLEGYQTNEQI 269


>gi|239625648|ref|ZP_04668679.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519878|gb|EEQ59744.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 278

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 119/238 (50%), Gaps = 2/238 (0%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D T   T   FG   R+DLSK FP++T ++  +KS V ELLW  +  SN   +H     
Sbjct: 34  EDGTPAHTIKRFGIVNRYDLSKEFPVITLRRTAFKSAVDELLWIWQKKSN--NIHDLNSH 91

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD+DG +G  YG Q      Y     DQ+  I+  L+ +P SRR + + +N   +
Sbjct: 92  IWDSWADEDGSIGKAYGYQLGVKHHYKEGDFDQVDRILHDLKHNPLSRRIMSNIYNHHDL 151

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            +M L PC     F V    L+  L QRS D+     +N+  Y++L  M A V G   GE
Sbjct: 152 HEMNLYPCAYSMTFNVSGNTLNGILNQRSQDMLTANSWNVCQYAILLHMFAQVSGLVAGE 211

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
            +H + D H+Y+ H    +  L + P   P + ++ +I D   F    F L +Y+ HA
Sbjct: 212 LVHVIADAHIYDRHIPMVEELLKKEPYPGPTLAMDTSITDFYQFTTSSFRLENYQYHA 269


>gi|219681334|ref|YP_002456098.1| putative thymidylate synthase [Erwinia phage phiEa21-4]
 gi|199580601|gb|ACH88988.1| putative thymidylate synthase [Erwinia phage phiEa21-4]
          Length = 311

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 129/261 (49%), Gaps = 39/261 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY     +++  G  R  R+G      F   +R D+ K FPLLT K V    V  ELLW
Sbjct: 6   QQYKAFTANILSNGELRHSRSGNTISVPFPEDLRIDVRKEFPLLTCKSVPMSLVAGELLW 65

Query: 62  FLRGDSNVSYLHRHGV-------SIWD---------------------------EWADKD 87
           FL G +++  L  +         +IW                               D  
Sbjct: 66  FLAGKTDLHSLRMYQFGSDEGQNTIWTADYERYSKAVKSLIRKVQTGESQEKTLRKIDAQ 125

Query: 88  GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN-VALIDKM-ALPP 145
            +LG IYG QWR +   D    DQI+ +++ ++ +P SR HIVSAWN VA+ + + ALPP
Sbjct: 126 EDLGMIYGSQWREFESCD-TTCDQITRLIEGIKENPASRYHIVSAWNPVAVANNLGALPP 184

Query: 146 CHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLG 204
           CH  FQ Y  + G +  + YQRS D FLG+PFNIASY+LL  +LA + G+     I + G
Sbjct: 185 CHMFFQVYASEGGYMDLRWYQRSVDTFLGLPFNIASYALLLRILAQMTGYTARYVIGSFG 244

Query: 205 DVHLYNNHFEQADLQLSRSPR 225
           D H+Y NH   A +Q+  +P 
Sbjct: 245 DAHIYENHVP-AVMQMMDNPE 264


>gi|119622124|gb|EAX01719.1| thymidylate synthetase, isoform CRA_d [Homo sapiens]
          Length = 208

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 87/124 (70%)

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
           MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FI
Sbjct: 85  MALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFI 144

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260
           HTLGD H+Y NH E   +QL R PR  P++ I   +  +  F+ EDF +  Y PH  I  
Sbjct: 145 HTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKM 204

Query: 261 KVSV 264
           +++V
Sbjct: 205 EMAV 208


>gi|218673225|ref|ZP_03522894.1| thymidylate synthase [Rhizobium etli GR56]
          Length = 107

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 66/107 (61%), Positives = 84/107 (78%)

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           KLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA 
Sbjct: 1   KLSCQLYQRSADIFLGVPFNIASYALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFDQAK 60

Query: 218 LQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           LQL+R P+ LP M INP + D+  F ++DF L  YE  A+I A ++V
Sbjct: 61  LQLTRRPKPLPFMRINPEVKDIFGFTFDDFELIGYEADASIKAPIAV 107


>gi|167766809|ref|ZP_02438862.1| hypothetical protein CLOSS21_01317 [Clostridium sp. SS2/1]
 gi|317498799|ref|ZP_07957087.1| thymidylate synthase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711563|gb|EDS22142.1| hypothetical protein CLOSS21_01317 [Clostridium sp. SS2/1]
 gi|291560612|emb|CBL39412.1| thymidylate synthase [butyrate-producing bacterium SSC/2]
 gi|316893934|gb|EFV16128.1| thymidylate synthase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 282

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 122/246 (49%), Gaps = 10/246 (4%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVS 78
           D     T   FG   R+DLSK FP LT +K + KS + ELLW  +  SN V+ L  H   
Sbjct: 33  DGESAYTIKQFGVVNRYDLSKEFPALTLRKTYIKSAIDELLWIWQKKSNNVNDLKSH--- 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWDEWAD+DG +G  YG Q      Y   ++DQ+  ++  L+ +PYSRR + + +    +
Sbjct: 90  IWDEWADEDGSIGKAYGYQMGVKHQYKEGMMDQVDRVIYDLKHNPYSRRIMTNIYVHQDL 149

Query: 139 DKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            +M L PC     F V      D   L+  L QRS D+     +N+  Y+ L  M+A V 
Sbjct: 150 HEMNLYPCAYSVTFNVTKKPGHDKLTLNAILNQRSQDILAANNWNVVQYAALVYMMAQVC 209

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
             + GE +H + D H+Y+ H       + R     P++ +NP + D   F  +DF +  Y
Sbjct: 210 DMEPGELVHVIADAHIYDRHIPIIKEMIKRETYPAPKVTLNPEVKDFYEFTTDDFKIEDY 269

Query: 253 EPHAAI 258
           +    I
Sbjct: 270 QAGEQI 275


>gi|329939291|ref|ZP_08288627.1| Thymidylate synthase [Streptomyces griseoaurantiacus M045]
 gi|329301520|gb|EGG45414.1| Thymidylate synthase [Streptomyces griseoaurantiacus M045]
          Length = 298

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 130/279 (46%), Gaps = 22/279 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH--WKSVVHEL 59
            QY  +L  +++ G     R G    +     M FDL+ GFP++T + +   W+  + EL
Sbjct: 13  EQYRRILGAILESGIPVPTRQGPEALTLMQQTMSFDLANGFPVITERSLARFWRKPIGEL 72

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGP-IYGVQWRSWPDYDGNVI 109
             F+ G   +  L   G   W  WA +          G+LGP  YG  +  +P  +G   
Sbjct: 73  CAFINGARTLDALAEFGCDWWGPWASEGKTSRRGLPPGDLGPGSYGGAFHDFPTAEGPGF 132

Query: 110 DQISSIVQSLRADPYSRRHIVSAW-------NVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DQ   +V+ LR  P  R H VS W             K  + PCH      V  GKL   
Sbjct: 133 DQFRHLVEQLRELPGDRTHFVSPWIPQYQVRGEGKTPKTTISPCHGWVHVRVLGGKLHLH 192

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRSGDV +G+P N+  Y+ L +ML  + G     + HT+ D H+Y +  ++    L R
Sbjct: 193 MFQRSGDVPVGVPSNMIQYAALLLMLEHLTGIPAARYYHTISDAHVYADQVDRVRGMLDR 252

Query: 223 SPRTLPQMIINPN---IVDLLSFRYEDFTLRSYEPHAAI 258
            PR LP + +N +   + D+  FR E F L  Y+PH AI
Sbjct: 253 EPRRLPTVTLNESGRRVKDIHDFRPEHFDLADYDPHPAI 291


>gi|302671643|ref|YP_003831603.1| thymidylate synthase ThyA [Butyrivibrio proteoclasticus B316]
 gi|302396116|gb|ADL35021.1| thymidylate synthase ThyA [Butyrivibrio proteoclasticus B316]
          Length = 283

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 120/251 (47%), Gaps = 8/251 (3%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D T   T   FG   R+DLSK FP++T +K   KS   E+LW  +  SN   +H     I
Sbjct: 33  DGTPAYTIKKFGVVNRYDLSKEFPIMTLRKTALKSATDEILWIYQKKSN--NIHDLNSHI 90

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           WDEWAD+ G +G  YG Q      Y     DQI  ++  L+ +P+SRR + + +  + + 
Sbjct: 91  WDEWADETGSIGKAYGYQIGQKSIYKEGEFDQIDRVIYDLKNNPFSRRIMTNTYVFSDLH 150

Query: 140 KMALPPCHCLFQFYVDNGK------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           +M L PC     + V   K      L+  L QRS DV     +N+  Y++L  MLA V  
Sbjct: 151 EMNLYPCAYSVTYNVTQKKGEDKLTLNAILNQRSQDVLAANNWNVVQYAVLVHMLAQVCD 210

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GE +H + D H+Y+ H       + R P   P+  +NP+I D   F   D +L  YE
Sbjct: 211 MNVGELVHVIADAHIYDRHVPLIKELIERKPLPAPKFHLNPDIKDFYEFTRNDVSLEGYE 270

Query: 254 PHAAILAKVSV 264
                L  + +
Sbjct: 271 VAGEQLKDIPI 281


>gi|313905071|ref|ZP_07838441.1| thymidylate synthase [Eubacterium cellulosolvens 6]
 gi|313470141|gb|EFR65473.1| thymidylate synthase [Eubacterium cellulosolvens 6]
          Length = 282

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 128/265 (48%), Gaps = 19/265 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ R +I  G             D T   T   FG   R+DL K FP +T ++   KS
Sbjct: 8   FVDMCRDIIDHGCSTEGEKVRPHWEDGTSAYTIKKFGVVNRYDLRKEFPAITLRRTAIKS 67

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
              ELLW  +  SN V  L  H   IWD WAD++G +G  YG Q      +    +DQ+ 
Sbjct: 68  CTDELLWIWQKKSNNVKDLKSH---IWDAWADENGTIGKAYGYQLGVKYKFPEGEMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRS 167
            ++  L+ +PYSRR + S +N   + +MAL PC     F V          L+  L QRS
Sbjct: 125 RLIYDLKNNPYSRRILTSIYNFQDLHEMALYPCAYSMTFNVTKEPGSEKLVLNSILNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  Y++LTMM+A   G   GEF+H + D H+Y+ H    +  ++R     
Sbjct: 185 QDILTANNWNVCQYAILTMMIAQTCGMIPGEFMHVIADAHIYDRHIPLVEELITREQYPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSY 252
           P++ +NP I D   F  +D  +  Y
Sbjct: 245 PKVHLNPEITDFYQFTPDDVIVEDY 269


>gi|289450174|ref|YP_003475119.1| thymidylate synthase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184721|gb|ADC91146.1| thymidylate synthase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 276

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 127/233 (54%), Gaps = 2/233 (0%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D T   T  TF    R+DLS+ FPLLT +K+++K+ + E+LW  +  SN   +      I
Sbjct: 33  DGTPAHTLKTFALVNRYDLSEEFPLLTLRKINFKAALDEMLWIWQRKSN--KIADLNSKI 90

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           WD WA +DG +G  YG Q      Y    +DQ+  ++  LR DPYSRR I + +N A ++
Sbjct: 91  WDSWAGEDGTIGKAYGYQLGVKHHYPEGDMDQVDRVLYLLRNDPYSRRIITNIYNHADLN 150

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
           +M L PC     F V   +L+  L QRS D+ +   +N+A Y+ L +M+A + G++ GE 
Sbjct: 151 EMNLYPCAYSVTFNVTGNRLNALLNQRSQDMLVANNWNVAQYAALLLMIAKITGYEPGEL 210

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           +H + D H+Y+ H    +  + +   + P++ +  +  D  +   +DF + +Y
Sbjct: 211 VHVIADAHIYDRHIPLVEELIKQPTYSAPKVELKYSGNDFYAVNVDDFVVTNY 263


>gi|210616227|ref|ZP_03291007.1| hypothetical protein CLONEX_03226 [Clostridium nexile DSM 1787]
 gi|210149893|gb|EEA80902.1| hypothetical protein CLONEX_03226 [Clostridium nexile DSM 1787]
          Length = 282

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 19/271 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ R +I  G             D +   T   F    R+DLSK FP LT ++   KS
Sbjct: 8   FIDMCRDIIDNGVSTEGEKVRPKWEDGSFAYTLKKFCVVNRYDLSKEFPALTLRRTGIKS 67

Query: 55  VVHELLW-FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            V ELLW + R  +NV  L  H   IWD WAD+DG +G  YG Q      Y   ++DQ+ 
Sbjct: 68  CVDELLWIWQRKSNNVHDLKPH---IWDSWADEDGSIGKAYGYQMSVKHQYKEGMMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----DNGKLSCQ--LYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V    D+ KL     L QRS
Sbjct: 125 RVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKNDSDKLVLNGILNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DV     +N+  Y++L  MLA V   Q GEF+H + D H+Y+ H    +  +SR P   
Sbjct: 185 QDVLAANNWNVCQYAVLMHMLAQVCDMQVGEFVHVIADAHIYDRHIPLVEELISREPLPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           P   +NP + +   F  +D  L +YE  + I
Sbjct: 245 PTFWLNPEVKNFYEFTPDDVRLDNYETGSQI 275


>gi|148550248|ref|YP_001270350.1| thymidylate synthase [Pseudomonas putida F1]
 gi|148514306|gb|ABQ81166.1| thymidylate synthase [Pseudomonas putida F1]
          Length = 234

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 123/236 (52%), Gaps = 53/236 (22%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI  G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY---- 104
            FLRG  N       G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 105 -----------------------DG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNI---ASYSLLT 185
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D  LG+  ++   A Y+LL 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSND--LGLLLDMGKSAQYALLA 234


>gi|291522853|emb|CBK81146.1| thymidylate synthase [Coprococcus catus GD/7]
          Length = 282

 Score =  145 bits (367), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/233 (34%), Positives = 119/233 (51%), Gaps = 8/233 (3%)

Query: 26  TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD 85
           T   FG   R+DLSK FP LT +K   KS   E+LW  +  SN   +H    ++WDEWAD
Sbjct: 39  TMKKFGVVNRYDLSKEFPALTLRKTAIKSATDEMLWIWQRKSN--NIHDLNSTVWDEWAD 96

Query: 86  KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
           ++G +G  YG Q      Y   ++DQ+  ++  L+ +PYSRR + + +    + +M L P
Sbjct: 97  ENGSIGKAYGYQMGVKHQYKEGMMDQVDRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYP 156

Query: 146 CHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
           C     F V      D   L+  L QRS DV     +N+  YS+L  MLA V   Q GE 
Sbjct: 157 CAYSMTFNVTKKPGDDKLVLNAILNQRSQDVLAANNWNVVQYSVLMHMLAQVCDMQVGEL 216

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           +H + D H+Y+ H    +  +SR     P   +NP+I +   F  +D T+ +Y
Sbjct: 217 VHVIADAHIYDRHIPLIEELISRETHPAPIFKLNPDIKNFYDFTTKDITIENY 269


>gi|255994719|ref|ZP_05427854.1| thymidylate synthase [Eubacterium saphenum ATCC 49989]
 gi|255993432|gb|EEU03521.1| thymidylate synthase [Eubacterium saphenum ATCC 49989]
          Length = 276

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 125/240 (52%), Gaps = 4/240 (1%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGVS 78
           D T   T   FG    +DLS+ FP LT +    K  V ELLW + R  +N+  L+    S
Sbjct: 33  DGTPAHTIKMFGIVNEYDLSEEFPALTLRPTAIKLAVDELLWIWQRKSNNIKDLNS---S 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWDEWAD++G +G  YG Q      +    +DQ+ +++  L+ +PYSRR + + +N + I
Sbjct: 90  IWDEWADENGSIGKAYGYQMAKKYKFAQGEMDQVDNVIWQLKNNPYSRRILTNIYNFSDI 149

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            +M L PC     F V   KL+  L QRS D+     +N+  YS+L  +L+ V GF+ G+
Sbjct: 150 SEMNLEPCAYSMTFNVTGDKLNGILNQRSQDILAANNWNVVQYSVLLHLLSKVCGFKPGK 209

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
            +H + D H+Y+ H    +  +SR     P+  I+  + D   F  +D  + +Y+    I
Sbjct: 210 LVHVIADAHIYDRHIPMIEDLISRKSYDAPKFSIDDGVDDFYKFSMDDIKVENYKAGPQI 269


>gi|224158660|ref|XP_002191045.1| PREDICTED: similar to thymidylate synthase, partial [Taeniopygia
           guttata]
          Length = 157

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 75/161 (46%), Positives = 100/161 (62%), Gaps = 4/161 (2%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y    +DQ+  ++++++ +P  RR I+ AWN   I  MALPPCH L QFYV NG+LSCQL
Sbjct: 1   YSNQGVDQLQKVIETIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQL 60

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASYSLLT M+A V G + G  I     + LY         QL R 
Sbjct: 61  YQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKVGYLIILF--ILLYTVSL--LLFQLQRE 116

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR  P++ I   I D+ +F+ EDF +  Y PH  I  +++V
Sbjct: 117 PRPFPKLKILREIKDISNFKAEDFQIEDYNPHPPIKMEMAV 157


>gi|225019180|ref|ZP_03708372.1| hypothetical protein CLOSTMETH_03132 [Clostridium methylpentosum
           DSM 5476]
 gi|224948032|gb|EEG29241.1| hypothetical protein CLOSTMETH_03132 [Clostridium methylpentosum
           DSM 5476]
          Length = 276

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 2/237 (0%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D     T+  FG   R+DLS+ FPLLT +K++ ++ + E+LW  +  SN   +      
Sbjct: 32  EDGQPAHTKKQFGIVNRYDLSREFPLLTLRKINTRAAIDEILWIWQKKSN--NVQDLNSK 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD+ G +G  YG Q     +Y   + DQ+  ++  L+ +P SRR + + +    +
Sbjct: 90  IWDSWADESGSIGKAYGYQMAVKHEYSDGMFDQVDRVLHDLKNNPNSRRMLTNIYVHQDL 149

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            +M L PC     F V   KL+  L QRS D+ +   +NI  Y+ L  M A V G   GE
Sbjct: 150 HEMNLYPCAYSVTFNVSGNKLNAILNQRSQDMLVANGWNICQYAALIHMFAQVSGLVAGE 209

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
            +H + D H+Y+ H    +  + + P   P++ IN  + D   F  +DF    Y+ H
Sbjct: 210 LVHVIADAHIYDRHIPIIEKLIEQQPFPAPRLEINEEVTDFYRFTPDDFAFPDYQYH 266


>gi|293115507|ref|ZP_05791824.2| thymidylate synthase [Butyrivibrio crossotus DSM 2876]
 gi|292809488|gb|EFF68693.1| thymidylate synthase [Butyrivibrio crossotus DSM 2876]
          Length = 283

 Score =  145 bits (365), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 122/241 (50%), Gaps = 10/241 (4%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77
            D T   T   FG   R+DLSK FPL+T +K   KS   ELLW  +  SN +  LH H  
Sbjct: 33  EDGTPAYTIKKFGVVNRYDLSKEFPLVTLRKTALKSATDELLWIWQKKSNNIHDLHSH-- 90

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
            IWD WAD++G +G  YG Q      Y   ++DQ+  ++  L+ +P+SRR + + +    
Sbjct: 91  -IWDAWADENGSIGKAYGYQLGVKHRYKEGMMDQVDRVIYDLKNNPFSRRIMTNIYVHQD 149

Query: 138 IDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           + +M L PC     F V   K      L+  L QRS D+     +N+A Y++L  MLA V
Sbjct: 150 LHEMNLYPCAYSMTFNVTQKKGEDKLTLNAILNQRSQDILTANNWNVAQYAVLVHMLAQV 209

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
              Q GE +H + D H+Y+ H    +  +SR     P   +NP + D   F  +D ++ +
Sbjct: 210 CDMQVGELVHVIADAHIYDRHIPIVEELISRECYDAPTFHLNPEVKDFYKFTRDDVSVDN 269

Query: 252 Y 252
           Y
Sbjct: 270 Y 270


>gi|85713217|ref|ZP_01044245.1| thymidylate synthase [Idiomarina baltica OS145]
 gi|85692960|gb|EAQ30930.1| thymidylate synthase [Idiomarina baltica OS145]
          Length = 283

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + +I  G      RTG+   +     + +D+    FPL+TT+K ++K+ + E
Sbjct: 1   MKQYLQLCQRIIDEGEWVHNARTGINCLTVINADLEYDVEHNQFPLITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL +LRG  + +     G + W+  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYLRGYDSAAQFRDIGCNTWNANANENASWLANPHRKGPDDMGRVYGVQGRAWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           +  DQ+  +V  L      R  IV+ +N   +D   L PC     F + NGKL    YQR
Sbjct: 121 SQFDQLQKVVDDLTQGIDDRGEIVTFYNPGELDMGCLRPCMHTHTFSLLNGKLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVARITGHKPGKVFHKIVNAHIYENQLELMRDVQLKREPY 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAI 258
             PQ+ INP+I  L         +DF++  Y+ H  I
Sbjct: 241 PSPQLHINPDIKTLQDIETWVTKDDFSIEGYQHHPPI 277


>gi|330967053|gb|EGH67313.1| thymidylate synthase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 234

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 117/220 (53%), Gaps = 48/220 (21%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             ELG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDELGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 VGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFL 172
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ L
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGL 220


>gi|294646594|ref|ZP_06724226.1| thymidylate synthase [Bacteroides ovatus SD CC 2a]
 gi|292638036|gb|EFF56422.1| thymidylate synthase [Bacteroides ovatus SD CC 2a]
          Length = 110

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/109 (57%), Positives = 82/109 (75%)

Query: 156 NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
           +G+LS QLYQRS D+FLG+PFNIASY+LL  M+A V G + G+F+HT GD H+Y NH EQ
Sbjct: 2   DGRLSLQLYQRSADIFLGVPFNIASYALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQ 61

Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             LQLSR PR LPQM INP++ ++  F++EDF L +Y+PH  I   V+V
Sbjct: 62  VKLQLSREPRPLPQMKINPDVKNIFDFKFEDFELVNYDPHPHIAGAVAV 110


>gi|257784436|ref|YP_003179653.1| thymidylate synthase [Atopobium parvulum DSM 20469]
 gi|257472943|gb|ACV51062.1| thymidylate synthase [Atopobium parvulum DSM 20469]
          Length = 282

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 136/266 (51%), Gaps = 19/266 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+   +I+ G+            D T   T   FG   R+DL + FP LT ++   KS
Sbjct: 8   FIDMCSDIIENGTTTEGEKVRPTWEDGTSAYTIKKFGVCNRYDLREEFPALTLRRTALKS 67

Query: 55  VVHELLW-FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + E+LW + +  +NV+ L+ H   IWD WAD+ G +G  YG Q      Y     DQ+ 
Sbjct: 68  AMDEVLWIYQKKSNNVNDLNSH---IWDSWADESGSIGKAYGYQVGQVSHYADGDYDQMD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPC--HCLFQFYVDNGK----LSCQLYQRS 167
            +++ L+ +P+SRR + + +  A + +M L PC  + ++      GK    L+  L QRS
Sbjct: 125 RVLKDLKENPFSRRIMTNLYTFADLSEMNLYPCAFNAIYNVTQGAGKNRPTLNLLLVQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  Y++L MM+A V G + GE +H + D H+Y+ H +     +SR     
Sbjct: 185 QDILAANNWNVCQYAILLMMVAQVSGMEAGELVHMIADAHIYDRHVDIVKELISRPTFDA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYE 253
           P++ +NPNI +   F  +D  +  Y+
Sbjct: 245 PKVSLNPNITNFYDFTTDDLIVEDYQ 270


>gi|332532620|ref|ZP_08408496.1| thymidylate synthase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037836|gb|EGI74285.1| thymidylate synthase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 283

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 139/283 (49%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G      RTG    +     + +D++   FP++TT+K ++K+ + E
Sbjct: 1   MKQYLELCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL +LRG  + +     G   WD  A+          + GE  +G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDSAAQFREIGCKTWDANANDNNAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+S ++ +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 STLDQLSKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N  E   D+QL+R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKIANAHIYENQLELMRDVQLTREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 ASPQLKINPEIKSLEDIETWVTRDDFEVTGYQCHEAIQYPFSV 283


>gi|229829347|ref|ZP_04455416.1| hypothetical protein GCWU000342_01434 [Shuttleworthia satelles DSM
           14600]
 gi|229792510|gb|EEP28624.1| hypothetical protein GCWU000342_01434 [Shuttleworthia satelles DSM
           14600]
          Length = 288

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 23/271 (8%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+   +I  G+  +         D T   T   FG   R+DLS+ FP +T ++   KS
Sbjct: 8   FVDMCEEIINRGTGSQGMEVRPRWEDGTPAHTIKRFGVVNRYDLSREFPAITLRRTAIKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQ----WRSWPDYDGNVI- 109
            V+E+LW  +  SN   +     S+WDEWAD++G +G  YG Q    +    D DG+ + 
Sbjct: 68  CVNEMLWIWQKKSN--NIRDLKSSVWDEWADEEGSIGKAYGYQIGKKYLHHTDADGSPVY 125

Query: 110 -DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQ 162
            DQI +++  LR +P+SRR IV+ +N   + +M L PC     F V          L+  
Sbjct: 126 MDQIDAVLYDLRHNPFSRRIIVNMYNFDDLHEMHLYPCAYSMTFNVTKNPKSGRMVLNAI 185

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           L QRS DV     +N+  Y++L  MLA V   + GE +H + D H+Y+ H       +SR
Sbjct: 186 LNQRSQDVLAANNWNVCQYAVLLHMLAQVCHMEAGELVHVIADAHIYDRHIPLVQELISR 245

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
                P+  +NP I D   F  ED  L  Y+
Sbjct: 246 EQFPAPKFWLNPEIHDFYQFTEEDIRLDDYQ 276


>gi|295698569|ref|YP_003603224.1| thymidylate synthase [Candidatus Riesia pediculicola USDA]
 gi|291157314|gb|ADD79759.1| thymidylate synthase [Candidatus Riesia pediculicola USDA]
          Length = 283

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 140/277 (50%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QY+DL R +I  G   + +RT     +     + +D+    FPL+TT+K+ +KS + E
Sbjct: 1   MKQYIDLCRKIIHEGCWIKNNRTKTRCLTIINADLEYDVENNQFPLITTRKISYKSAISE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           ++  +RG  +       G ++W+  A+++             +LG IYGVQ RSW  +DG
Sbjct: 61  MIGHIRGYRSAKQFRDLGCNVWEANANQNKSWLSNPYRKGRDDLGRIYGVQGRSWKKHDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  ++Q L+     R  I++ +N   I+   L PC     F + + KL    YQR
Sbjct: 121 SHLDQLRKVIQHLKDGIDDRAEIITFYNPGEIEMGCLIPCMHTHTFSILDKKLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A +  ++ G+  H + + H+Y N      D+QL RSP 
Sbjct: 181 SCDVPLGLSFNQIQCFILLALVAQITNYKPGKVYHKIVNAHIYENQLSLMRDVQLKRSPY 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
            L ++IINP I  L         +DF + +Y  H  I
Sbjct: 241 PLSKLIINPKIKKLEDIENWVSSDDFKVINYRFHGKI 277


>gi|330899102|gb|EGH30521.1| thymidylate synthase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 234

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 117/220 (53%), Gaps = 48/220 (21%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFL 172
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ L
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGL 220


>gi|284008551|emb|CBA75098.1| thymidylate synthase [Arsenophonus nasoniae]
          Length = 283

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 140/277 (50%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G      RTGV   +     + +D++   FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLDLCQRIIDEGQWIENKRTGVRCLTIINADLEYDVANNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106
           LL +LRG S+ +     G + W+  A+++          GE  +G +YGVQ RSW   DG
Sbjct: 61  LLGYLRGYSSAAQFRDIGCNTWNANANENQAWLNNPNRKGEDDMGRVYGVQGRSWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  ++ +L      R  I++ +N    +   L PC     F +  G L    YQR
Sbjct: 121 TYLDQLQKVISNLSVGIDDRAEIITFYNPGEFELGCLRPCMHTHTFSLLAGTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R+P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALIAQITGHKPGKVYHKIVNAHIYENQLSIMRDIQLKRAPY 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAI 258
           +LPQ+ INP+I  L          DF +  Y+ H AI
Sbjct: 241 SLPQLQINPDIKTLKDIETWVSSHDFQVIGYQYHDAI 277


>gi|77359700|ref|YP_339275.1| thymidylate synthase [Pseudoalteromonas haloplanktis TAC125]
 gi|123587148|sp|Q3IDN1|TYSY_PSEHT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|76874611|emb|CAI85832.1| thymidylate synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 283

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G      RTG    +     + +D++   FP++TT+K ++K+ + E
Sbjct: 1   MKQYLQLCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL +LRG  + +     G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYLRGYDSAAQFREIGCKTWDANANENSAWLNNPHRKGEDDMGRVYGVQGRAWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ++ ++ +L+     R  I+S +N    +   L PC     F +    L     QR
Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIISFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSIQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKITNAHIYENQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             PQ+ INPNI  L         +DF +  YE H AI    SV
Sbjct: 241 ASPQLKINPNIKSLNDIETWVTRDDFEVTGYECHEAIQYPFSV 283


>gi|268590564|ref|ZP_06124785.1| thymidylate synthase [Providencia rettgeri DSM 1131]
 gi|291313951|gb|EFE54404.1| thymidylate synthase [Providencia rettgeri DSM 1131]
          Length = 283

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 135/277 (48%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M  YLDL + +I  G      RTGV   +     + +D+    FPL+TT+K  +K+ + E
Sbjct: 1   MKPYLDLCQRIIDEGQWVENKRTGVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+++          GE  +G +YGVQ RSW   DG
Sbjct: 61  LLGYLRGYDNAAQFREIGCNTWNANANENQAWLNNPYRKGEDDMGRVYGVQGRSWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  +V +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 THLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARISGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAI 258
             P ++INP I  L         +DFTL  Y+ H AI
Sbjct: 241 ASPSLVINPKIQSLEDLETWVTSDDFTLEGYQCHEAI 277


>gi|183597807|ref|ZP_02959300.1| hypothetical protein PROSTU_01136 [Providencia stuartii ATCC 25827]
 gi|188022562|gb|EDU60602.1| hypothetical protein PROSTU_01136 [Providencia stuartii ATCC 25827]
          Length = 283

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 138/277 (49%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + +I  G      RTGV   +     + +D++   FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLELCQRIIDEGQWVENKRTGVRCLTVINADLEYDVANNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106
           LL +LRG  + +     G + W+  A+++          GE  +G +YGVQ RSW   DG
Sbjct: 61  LLGYLRGYDSAAQFREIGCNTWNANANENQAWLNNPHRKGEDDMGRVYGVQGRSWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  +V +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 SHLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
            LP + INP I  L         +DFTL  Y+ H AI
Sbjct: 241 PLPSLSINPQIKTLEDIETWVSTDDFTLEGYQCHEAI 277


>gi|226323905|ref|ZP_03799423.1| hypothetical protein COPCOM_01680 [Coprococcus comes ATCC 27758]
 gi|225207454|gb|EEG89808.1| hypothetical protein COPCOM_01680 [Coprococcus comes ATCC 27758]
          Length = 282

 Score =  142 bits (358), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 126/264 (47%), Gaps = 17/264 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R +I  G+            D T   T   FG   R+DL K FP LT ++   KS
Sbjct: 8   FIEMCRDIIDNGTSTEGEKVRPRWEDGTPAYTVKKFGVVNRYDLRKEFPALTLRRTGIKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
              ELLW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   ++DQ+  
Sbjct: 68  CTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMGVKHVYKEGMMDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168
           ++  L+ +PYSRR + + +    + +M L PC     F V   K      L+  L QRS 
Sbjct: 126 VLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEKGSDKLTLNGILNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV     +N+  Y++L  MLA V   Q GEF+H + D H+Y+ H    +  +SR     P
Sbjct: 186 DVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHISLIEELISRETHPAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSY 252
           +  +NP + D   F  +D  L  Y
Sbjct: 246 KFWLNPEVKDFYQFTPDDVRLDDY 269


>gi|113461755|ref|YP_719824.1| thymidylate synthase [Haemophilus somnus 129PT]
 gi|170718531|ref|YP_001783740.1| thymidylate synthase [Haemophilus somnus 2336]
 gi|123132252|sp|Q0I563|TYSY_HAES1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036936|sp|B0UWT7|TYSY_HAES2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|112823798|gb|ABI25887.1| thymidylate synthase [Haemophilus somnus 129PT]
 gi|168826660|gb|ACA32031.1| Thymidylate synthase [Haemophilus somnus 2336]
          Length = 283

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 142/284 (50%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + +I  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MRQYLNLCQRIIDQGHWVENERTGKRCLTVINADLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPVRKGTDDMGRVYGVQGRRWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++ +N   ID   L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVNNLSKGIDDRGEILTFFNPGEIDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y + FE   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAYHKIINAHIYEDQFELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LP++ INP+I  L         +DF +  Y+ H AI    SV
Sbjct: 240 FPLPRLEINPDIKTLEDLETWVTMDDFKVIGYQCHEAIKYPFSV 283


>gi|154484777|ref|ZP_02027225.1| hypothetical protein EUBVEN_02495 [Eubacterium ventriosum ATCC
           27560]
 gi|149734625|gb|EDM50542.1| hypothetical protein EUBVEN_02495 [Eubacterium ventriosum ATCC
           27560]
          Length = 282

 Score =  142 bits (357), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 17/264 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ R+++  G+D +         D +   T   FG   R+DL K FP +T +K  +K+
Sbjct: 8   FVDMCRNILDNGTDTKGEKVRPKWDDGSFAYTIKKFGVVNRYDLKKEFPAITLRKTGFKN 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            + ELLW  +  SN   +H     IWD WAD+ G +G  YG Q      Y    +DQ+  
Sbjct: 68  CLDELLWIWQKKSN--NVHDLNSHIWDAWADETGSIGKAYGYQLGIKHHYKEGDMDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168
           ++  L+ +PYSRR + + +N   + +M L PC     F V   +      L+  L QRS 
Sbjct: 126 VLYDLKHNPYSRRIMTNIYNHEDLHEMNLYPCAYSMTFNVTKNEETGNLVLNGILNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV     +N+  Y+ L  M A V   + GEFIH + D H+Y+ H    +  ++R     P
Sbjct: 186 DVLTANNWNVCQYAALIHMFAQVNDMEVGEFIHVIADAHIYDKHVPLIEELITREQHPAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSY 252
           ++ INP I +   F  +D  L  Y
Sbjct: 246 KLWINPEIKNFYDFTVDDLKLEDY 269


>gi|167751275|ref|ZP_02423402.1| hypothetical protein EUBSIR_02261 [Eubacterium siraeum DSM 15702]
 gi|167655782|gb|EDR99911.1| hypothetical protein EUBSIR_02261 [Eubacterium siraeum DSM 15702]
 gi|291556779|emb|CBL33896.1| thymidylate synthase [Eubacterium siraeum V10Sc8a]
          Length = 275

 Score =  142 bits (357), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 5/238 (2%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77
            D T   T   F    R++L + FP++T ++++++S + E+LW  +  SN V+ L  H  
Sbjct: 32  EDGTPAHTVKKFCVVNRYNLQEEFPVMTLRRIYYRSAIEEILWIYQKKSNRVADLSTH-- 89

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
            IWD WAD++G +G  YG Q      Y     DQ+  ++  L  +P SRR + + +N   
Sbjct: 90  -IWDSWADENGTIGKAYGWQLGQKSIYPEGEFDQVDKVLYDLSHNPASRRIMTNMYNHKD 148

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +M L PC     F V    L+  L QRS D+     +N+  Y+ L +M A   G + G
Sbjct: 149 LHEMGLAPCAYSMTFNVTGDTLNAILNQRSQDMLTANNWNVCQYAALLIMFAKASGLKAG 208

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           E +H + D H+Y+ H +     + + P   P+M++  +I D   F    FTL+ Y+ H
Sbjct: 209 ELVHVIADAHIYDRHIDAVKRIIEKEPYPAPEMVVE-DITDFYKFTKNSFTLKDYKYH 265


>gi|325577728|ref|ZP_08148003.1| thymidylate synthase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160473|gb|EGC72599.1| thymidylate synthase [Haemophilus parainfluenzae ATCC 33392]
          Length = 283

 Score =  142 bits (357), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLSRGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGNKSGKAYHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              PQ+ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPSPQLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|145632282|ref|ZP_01788017.1| thymidylate synthase [Haemophilus influenzae 3655]
 gi|145634072|ref|ZP_01789783.1| thymidylate synthase [Haemophilus influenzae PittAA]
 gi|144987189|gb|EDJ93719.1| thymidylate synthase [Haemophilus influenzae 3655]
 gi|145268516|gb|EDK08509.1| thymidylate synthase [Haemophilus influenzae PittAA]
          Length = 283

 Score =  141 bits (356), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|229844040|ref|ZP_04464181.1| thymidylate synthase [Haemophilus influenzae 6P18H1]
 gi|229813034|gb|EEP48722.1| thymidylate synthase [Haemophilus influenzae 6P18H1]
          Length = 283

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLMKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|167945963|ref|ZP_02533037.1| thymidylate synthase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 93

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 62/93 (66%), Positives = 78/93 (83%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M QYLDL+RHV   G  + DRTG GTRS FGYQMRFDL++GFP LTTKK+H +S++HELL
Sbjct: 1  MKQYLDLMRHVRDQGVTKGDRTGTGTRSVFGYQMRFDLAEGFPALTTKKLHLRSIIHELL 60

Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
          WFL+GD+N+ YL  +GV IWDEWAD++G+LGP+
Sbjct: 61 WFLQGDTNIRYLKENGVRIWDEWADENGDLGPV 93


>gi|291531667|emb|CBK97252.1| thymidylate synthase [Eubacterium siraeum 70/3]
          Length = 275

 Score =  141 bits (356), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 5/238 (2%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77
            D T   T   F    R++L + FP++T ++++++S + E+LW  +  SN V+ L  H  
Sbjct: 32  EDGTPAHTVKKFCVVNRYNLQEEFPVMTLRRIYYRSAIEEILWIYQKKSNRVADLSTH-- 89

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
            IWD WAD++G +G  YG Q      Y     DQ+  ++  L  +P SRR + + +N   
Sbjct: 90  -IWDSWADENGTIGKAYGWQLGQKSIYPEGEFDQVDRVLYDLSHNPASRRIMTNMYNHKD 148

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +M L PC     F V    L+  L QRS D+     +N+  Y+ L +M A   G + G
Sbjct: 149 LHEMGLAPCAYSMTFNVTGDTLNAILNQRSQDMLTANNWNVCQYAALLIMFAKASGLKAG 208

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           E +H + D H+Y+ H +     + + P   P+M++  +I D   F    FTL+ Y+ H
Sbjct: 209 ELVHVIADAHIYDRHIDAVKRIIEKEPYPAPEMVVE-DITDFYKFTKNSFTLKDYKYH 265


>gi|88797182|ref|ZP_01112772.1| thymidylate synthase [Reinekea sp. MED297]
 gi|88780051|gb|EAR11236.1| thymidylate synthase [Reinekea sp. MED297]
          Length = 283

 Score =  141 bits (356), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + +I  G     +RTG    +     + +D+    FPL+TT+K ++K+ + E
Sbjct: 1   MKQYLELCQRIIDEGVWVENERTGKRCLTVINADLEYDVEHNQFPLITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+ +             ++G +YGVQ R+W   DG
Sbjct: 61  FLGYIRGYDNAADFRKLGARTWDANANDNQAWLNNPHRNGTDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV  L      R  I+S +N        L PC     F V +GKL    YQR
Sbjct: 121 GSVDQLQKIVDHLSKGMDDRGEILSFYNPGEFHMGCLRPCMHTHTFSVLDGKLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFFFLAIMAQITGLKPGKAYHKIVNAHIYEDQLELMRDVQLKREPY 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P+++INP+I  L         +DF++  Y+ H  I    SV
Sbjct: 241 PSPKLVINPDIRSLKDLETWVTMDDFSVEGYQHHDPIAYPFSV 283


>gi|145641907|ref|ZP_01797481.1| thymidylate synthase [Haemophilus influenzae R3021]
 gi|145273386|gb|EDK13258.1| thymidylate synthase [Haemophilus influenzae 22.4-21]
          Length = 283

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGIDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGETLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKRAGKAYHKIVNAHIYEDQLELMRDVQLKRKP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPLPKLEINPDIKSLEDLETWVTMDDFKVIGYQSHEPIKYPFSV 283


>gi|331090655|ref|ZP_08339504.1| thymidylate synthase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330400069|gb|EGG79720.1| thymidylate synthase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 282

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 119/235 (50%), Gaps = 10/235 (4%)

Query: 26  TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWA 84
           T   F    R+DLSK FP LT ++   KS V E+LW  +  SN ++ L+ H   IWD WA
Sbjct: 39  TMKKFCVVNRYDLSKEFPALTLRRTGIKSCVDEMLWIWQKKSNNINDLNSH---IWDSWA 95

Query: 85  DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144
           D+DG +G  YG Q      Y   ++DQ+  ++  L+ +PYSRR + + +    + +M L 
Sbjct: 96  DEDGSIGKAYGYQMSVKHQYKEGMMDQVDRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLY 155

Query: 145 PCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
           PC     F V      D   L+  L QRS DV     +N+  Y++L  MLA V   Q GE
Sbjct: 156 PCAYSVTFNVTKKNDSDKLVLNAILNQRSQDVLAANNWNVCQYAVLVHMLAQVCDMQVGE 215

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            +H + D H+Y+ H    +  +SR     P   +NP I D   F  +D  L +Y+
Sbjct: 216 LVHVIADAHIYDRHIPLIEELISRESYPAPAFWLNPEIKDFYEFTTDDVRLDNYQ 270


>gi|160938154|ref|ZP_02085510.1| hypothetical protein CLOBOL_03048 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438958|gb|EDP16714.1| hypothetical protein CLOBOL_03048 [Clostridium bolteae ATCC
           BAA-613]
          Length = 287

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 120/238 (50%), Gaps = 2/238 (0%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D T   T   FG   R+DL++ FP++T ++  +KS V ELLW  +  SN   +H     
Sbjct: 43  EDGTPAHTIKRFGIVNRYDLTREFPVITLRRTAFKSAVDELLWIWQKKSN--NIHDLNSH 100

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD++G +G  YG Q      Y     DQ+  I+  L+ +P SRR + + +N   +
Sbjct: 101 IWDSWADENGSIGKAYGYQLGVKHHYKEGDFDQVDRILYDLKHNPLSRRIMSNIYNHHDL 160

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            +M L PC     F V    L+  L QRS D+     +N+  Y++L  MLA V G + GE
Sbjct: 161 CEMNLYPCAYSMTFNVSGNTLNGILNQRSQDMLTANSWNVCQYAVLLHMLAQVSGLKPGE 220

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
            +H + D H+Y+ H    +  L R P   P + ++ +I +   F  + F L  Y+ H 
Sbjct: 221 LVHVIADAHIYDRHIPMVEELLKREPYPGPTLSMDTSIQNFYQFTTDSFRLEHYQYHT 278


>gi|253579644|ref|ZP_04856913.1| thymidylate synthase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849145|gb|EES77106.1| thymidylate synthase [Ruminococcus sp. 5_1_39BFAA]
          Length = 282

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 10/242 (4%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77
            D T   T   FG   R+DL K FP +T ++   KS + E+LW  +  SN +  LH H  
Sbjct: 32  EDGTPAYTIKKFGVVNRYDLRKEFPAMTLRRTALKSAMDEILWIWQKKSNNIHDLHSH-- 89

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
            IWD WAD+ G +G  YG Q      Y   ++DQ+  ++  L+ +P+SRR + + +    
Sbjct: 90  -IWDSWADESGSIGKAYGYQLGVKHQYKEGMMDQVDRVIYDLKNNPFSRRIMTNIYVHQD 148

Query: 138 IDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           + +M L PC     F V      D   L+  L QRS D+     +N+  Y+LL MM+A V
Sbjct: 149 LHEMNLYPCAYSMTFNVTQTPGNDKLTLNAILNQRSQDILAANNWNVCQYALLLMMVAQV 208

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
              + GE +H + D H+Y+ H       + R P   P + +NP + D   F  +D  + +
Sbjct: 209 CDMEAGELLHVVADCHIYDRHIPLIKELIQRKPYPAPVVKLNPEVKDFYQFTTDDLIVEN 268

Query: 252 YE 253
           YE
Sbjct: 269 YE 270


>gi|160946510|ref|ZP_02093719.1| hypothetical protein PEPMIC_00474 [Parvimonas micra ATCC 33270]
 gi|158447626|gb|EDP24621.1| hypothetical protein PEPMIC_00474 [Parvimonas micra ATCC 33270]
          Length = 276

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 13/260 (5%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++ + + +++ G D +         D T   T   FG   R++L++ FP LT +K   K 
Sbjct: 8   FISMCKDILENGVDTKGEKVRPVWEDGTKAYTIKKFGVVNRYNLAEEFPALTLRKTAIKL 67

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
              E+LW  +  SN +  L  H   +WDEWAD++G +G  YG Q      Y   + DQ+ 
Sbjct: 68  CTDEMLWIWQKKSNNIKDLKSH---VWDEWADENGSIGKAYGYQLGVKHKYKEGMFDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +PYSRR I + +    + +M L PC     F V   KL+  L QRS D+   
Sbjct: 125 RVIYDLKNNPYSRRIITNIYVHEDLSEMNLYPCAYSMTFNVTGNKLNAILNQRSQDILTA 184

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
             +N+  Y++L  MLA     + GE +H + D H+Y+ H       ++R     P++ +N
Sbjct: 185 NNWNVCQYAILIHMLARECNLEVGELVHVIADAHIYDRHVPIIKELITREKFPAPKVTLN 244

Query: 234 PNIVDLLSFRYEDFTLRSYE 253
           P++ +   F  +D  + +Y+
Sbjct: 245 PDVKNFYDFTSDDVIIENYK 264


>gi|238923626|ref|YP_002937142.1| thymidylate synthase [Eubacterium rectale ATCC 33656]
 gi|238875301|gb|ACR75008.1| thymidylate synthase [Eubacterium rectale ATCC 33656]
 gi|291525685|emb|CBK91272.1| thymidylate synthase [Eubacterium rectale DSM 17629]
 gi|291528190|emb|CBK93776.1| thymidylate synthase [Eubacterium rectale M104/1]
          Length = 282

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 117/240 (48%), Gaps = 8/240 (3%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D T   T   FG   R+DLSK FP +T +K + KS   ELLW  +  SN   +H     
Sbjct: 32  EDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTYIKSATDELLWIWQKKSN--NIHDLKSH 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           +WDEWAD+DG +G  YG Q      Y   ++DQ+  ++  L+  P+SRR + + +    +
Sbjct: 90  VWDEWADEDGSIGKAYGYQLGVKHQYKEGMMDQVDRVIYDLKHTPFSRRILTNIYVHQDL 149

Query: 139 DKMALPPCHCLFQFYVDNGK------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            +M L PC     F V   K      L+  L QRS DV     +N+  Y++L  MLA V 
Sbjct: 150 HEMNLYPCAYSMTFNVTQKKGDDRLTLNGILNQRSQDVLAANNWNVCQYAVLMHMLAQVC 209

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
             + GE +H + D H+Y+ H       + R     P+  +NP+I D   F  +D  +  Y
Sbjct: 210 DMRVGELVHVIADAHIYDRHVPIVKELIERPQYDAPKFWLNPDIKDFYQFTTDDIKITDY 269


>gi|148828083|ref|YP_001292836.1| thymidylate synthase [Haemophilus influenzae PittGG]
 gi|166231706|sp|A5UI47|TYSY_HAEIG RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148719325|gb|ABR00453.1| thymidylate synthase [Haemophilus influenzae PittGG]
          Length = 283

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIVSEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRELGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|332289795|ref|YP_004420647.1| thymidylate synthase [Gallibacterium anatis UMN179]
 gi|330432691|gb|AEC17750.1| thymidylate synthase [Gallibacterium anatis UMN179]
          Length = 283

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 140/284 (49%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G      RTG    +     + ++++   FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLDLCQRIIDEGVWVENQRTGKRCLTVIDASLTYNVADNEFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YGVQ RSW   +G
Sbjct: 61  LLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPYRKGEDDMGRVYGVQGRSWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV  L      R  I++ +N   I++  L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVNDLSKGIDDRGEILTFYNPGEIEQGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +      D QL R P
Sbjct: 181 SCDVPLGLTFNQIQVFTFLALM-AQITGHKPGKAFHKIINAHIYEDQLPLMRDEQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LPQ+ INP+I  L         +DF + +Y+ H AI    SV
Sbjct: 240 YPLPQLEINPDIKTLEDLETWVTLDDFKVHNYQCHPAIKYPFSV 283


>gi|154500728|ref|ZP_02038766.1| hypothetical protein BACCAP_04406 [Bacteroides capillosus ATCC
           29799]
 gi|150270617|gb|EDM97926.1| hypothetical protein BACCAP_04406 [Bacteroides capillosus ATCC
           29799]
          Length = 276

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 119/236 (50%), Gaps = 2/236 (0%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D     T   FG   R+DL K FP+ T +K+ +KS + ELLW  +  SN   +H     I
Sbjct: 33  DGASAHTIKLFGVVNRYDLKKEFPVQTIRKMAFKSSLDELLWIWQKKSN--NIHDLNSHI 90

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           WD WAD++G +G  YG Q      Y     DQ+  ++  L+ +P SRR + + +N   + 
Sbjct: 91  WDAWADENGSIGKAYGYQLGVKHVYPEGEFDQVDRVLYDLKHNPASRRIMTNLYNHHDLH 150

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
           +MAL PC     F V    L+  L QRS D+     +N+  Y+ L  MLA V G + GE 
Sbjct: 151 EMALYPCAYSMTFNVTGKTLNAILNQRSQDMLTANGWNVMQYAALVHMLARVSGLEAGEL 210

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
           +H + D H+Y+ H    +  ++R P   P++ ++  + D  +F  +   L  Y+ H
Sbjct: 211 VHVIADAHIYDRHVPIVEEIIARKPYDAPKLWMDTEVDDFYAFTRDSLKLEGYQSH 266


>gi|269103430|ref|ZP_06156127.1| thymidylate synthase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268163328|gb|EEZ41824.1| thymidylate synthase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 283

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLNLCQRIVDDGVWVENERTGKRCLTVISADLTYDVANNQFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+             D ++G +YGVQ RSW   DG
Sbjct: 61  LLGYIRGYDNAADFRALGTKTWDMNANDNQAWLNNPHRKGDDDMGRVYGVQGRSWRKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  IV  L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 STLDQLRKIVDDLSRGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++LL +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTLLALM-AQITGKKPGQAYHKIINAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              PQ+ INPNI  L         +DF +  YE H  I    SV
Sbjct: 240 FPSPQLKINPNIKSLEDLETWVTMDDFEVIGYEHHEPIKYPFSV 283


>gi|225572661|ref|ZP_03781416.1| hypothetical protein RUMHYD_00849 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039961|gb|EEG50207.1| hypothetical protein RUMHYD_00849 [Blautia hydrogenotrophica DSM
           10507]
          Length = 324

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 19/268 (7%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
           H ++ + + V++ G+            D T   T   FG   R+DL K FP LT +K   
Sbjct: 48  HVFISMCKDVLENGTSTEGEKVRPVWEDGTAAYTIKKFGVVNRYDLRKEFPALTLRKTAL 107

Query: 53  KSVVHELLWF-LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQ 111
           KS   E+LW   R  +N+  LH H   IWD WAD+ G +G  YG Q     +Y   ++DQ
Sbjct: 108 KSAFDEILWIWQRKSNNIHDLHSH---IWDSWADETGSIGKAYGYQMSVKHEYKEGMMDQ 164

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQ 165
           +  ++  L+ +PYSRR + + +    + +M L PC     F V      +   L+  L Q
Sbjct: 165 VDRVLYDLKNNPYSRRIMTNIYVHQDLHEMHLYPCAYSVTFNVTKEPGCEKLTLNAILNQ 224

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D+     +N+  Y+LL  M A   G Q GE +H + D H+Y+ H       + R   
Sbjct: 225 RSQDILAANNWNVCQYALLVHMFAQSCGMQAGELVHVIADCHIYDRHVPVIQELIQRPVY 284

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYE 253
             P + +NP + D   F  +D  + +Y+
Sbjct: 285 PAPTVYLNPEVRDFYQFTVDDLVVENYQ 312


>gi|329122919|ref|ZP_08251490.1| thymidylate synthase [Haemophilus aegyptius ATCC 11116]
 gi|301169623|emb|CBW29224.1| thymidylate synthetase [Haemophilus influenzae 10810]
 gi|327471850|gb|EGF17290.1| thymidylate synthase [Haemophilus aegyptius ATCC 11116]
          Length = 283

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKTAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN        +++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLVLMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|145638274|ref|ZP_01793884.1| thymidylate synthase [Haemophilus influenzae PittII]
 gi|148826451|ref|YP_001291204.1| thymidylate synthase [Haemophilus influenzae PittEE]
 gi|229845956|ref|ZP_04466068.1| thymidylate synthase [Haemophilus influenzae 7P49H1]
 gi|166231705|sp|A5UDH0|TYSY_HAEIE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145272603|gb|EDK12510.1| thymidylate synthase [Haemophilus influenzae PittII]
 gi|148716611|gb|ABQ98821.1| thymidylate synthase [Haemophilus influenzae PittEE]
 gi|229810960|gb|EEP46677.1| thymidylate synthase [Haemophilus influenzae 7P49H1]
 gi|309751428|gb|ADO81412.1| Thymidylate synthetase [Haemophilus influenzae R2866]
 gi|309973598|gb|ADO96799.1| Thymidylate synthetase [Haemophilus influenzae R2846]
          Length = 283

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIVSEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|212711211|ref|ZP_03319339.1| hypothetical protein PROVALCAL_02283 [Providencia alcalifaciens DSM
           30120]
 gi|212686379|gb|EEB45907.1| hypothetical protein PROVALCAL_02283 [Providencia alcalifaciens DSM
           30120]
          Length = 283

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 136/277 (49%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G      RT V   +     + +D+    FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLELCQRILDEGQWVENKRTNVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+++          GE  +G +YGVQ RSW   DG
Sbjct: 61  LLGYLRGYDNAAQFREIGCNTWNANANENQAWLDNPHRKGEDDMGRVYGVQGRSWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  +V +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 SHLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL+R P 
Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLTREPY 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
             P + INP I  L         +DFTL  Y+ H AI
Sbjct: 241 PSPNLTINPEIKTLEDIETWVTTDDFTLEGYQCHEAI 277


>gi|68249491|ref|YP_248603.1| thymidylate synthase [Haemophilus influenzae 86-028NP]
 gi|81336082|sp|Q4QM04|TYSY_HAEI8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|68057690|gb|AAX87943.1| thymidylate synthase [Haemophilus influenzae 86-028NP]
          Length = 283

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+ +             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANVNAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|319775163|ref|YP_004137651.1| thymidylate synthetase [Haemophilus influenzae F3047]
 gi|317449754|emb|CBY85961.1| thymidylate synthetase [Haemophilus influenzae F3047]
          Length = 283

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+ +             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANVNAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKRAGKAYHKIVNAHIYEDQLELMRDVQLKRKP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPLPKLEINPDIKSLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|311992725|ref|YP_004009593.1| Td thymidylate synthase [Acinetobacter phage Ac42]
 gi|298684508|gb|ADI96469.1| Td thymidylate synthase [Acinetobacter phage Ac42]
          Length = 291

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 137/285 (48%), Gaps = 21/285 (7%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M  Y + LR ++  G     DRTGVGT + FG   ++D+S+  P+LT +KV WKS+V E+
Sbjct: 7   MRDYDNALRDILDTGFHIDGDRTGVGTIAKFGVNTKYDISERVPVLTKRKVAWKSIVKEV 66

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK---------DGELGPIYGVQWRSW----PDYDG 106
           LW++ G SN++ L   G  IW  W  K         +G  G +YG     +     D + 
Sbjct: 67  LWYISGSSNINDLEDMGAKIWTPWKSKEFETKHGLPEGSAGYVYGFNLIHFGADVKDTNP 126

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---NGK---LS 160
              +Q+  ++ +LRA+P SR+   + W     ++  LP CH  + F V    NG+   L+
Sbjct: 127 KGFNQLDYVINTLRANPKSRQACFTFWRPDTNNQAILPACHAFYSFIVSPDKNGEMNVLN 186

Query: 161 CQLYQRSGDVFLGIPF-NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           C L+QRS D  +G+   NI + +L T M+A  +G   G   H+    H+Y N  +     
Sbjct: 187 CHLFQRSADYPIGVGMGNILTATLFTYMIAQQLGMTPGHVYHSGAHCHVYKNAIDATVEY 246

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R       ++       +  +  EDF L  Y P   I   ++V
Sbjct: 247 LEREDEPDSPILKLNKRDSIYDYVPEDFELIDYNPLPPIKFNIAV 291


>gi|16272842|ref|NP_439065.1| thymidylate synthase [Haemophilus influenzae Rd KW20]
 gi|145628166|ref|ZP_01783967.1| thymidylate synthase [Haemophilus influenzae 22.1-21]
 gi|145629985|ref|ZP_01785767.1| thymidylate synthase [Haemophilus influenzae R3021]
 gi|260579995|ref|ZP_05847825.1| thymidylate synthase [Haemophilus influenzae RdAW]
 gi|260581732|ref|ZP_05849529.1| thymidylate synthase [Haemophilus influenzae NT127]
 gi|319897608|ref|YP_004135805.1| thymidylate synthetase [Haemophilus influenzae F3031]
 gi|1174840|sp|P44420|TYSY_HAEIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|1573924|gb|AAC22564.1| thymidylate synthetase (thyA) [Haemophilus influenzae Rd KW20]
 gi|144979941|gb|EDJ89600.1| thymidylate synthase [Haemophilus influenzae 22.1-21]
 gi|144984266|gb|EDJ91689.1| thymidylate synthase [Haemophilus influenzae R3021]
 gi|260093279|gb|EEW77212.1| thymidylate synthase [Haemophilus influenzae RdAW]
 gi|260095325|gb|EEW79216.1| thymidylate synthase [Haemophilus influenzae NT127]
 gi|317433114|emb|CBY81488.1| thymidylate synthetase [Haemophilus influenzae F3031]
          Length = 283

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|301154747|emb|CBW14210.1| thymidylate synthetase [Haemophilus parainfluenzae T3T1]
          Length = 283

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLSRGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGNKPGKAYHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPSPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|119469927|ref|ZP_01612732.1| thymidylate synthase [Alteromonadales bacterium TW-7]
 gi|119446637|gb|EAW27910.1| thymidylate synthase [Alteromonadales bacterium TW-7]
          Length = 283

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G      RTG    +     + +D++   FP++TT+K ++K+ + E
Sbjct: 1   MKQYLKLCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL +LRG  +       G   WD  A+          + GE  +G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDSAEQFREIGCKTWDANANDNQAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ++ ++ +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAYHKIANAHIYENQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             P + INPNI  L         +DF +  Y+ H AI    SV
Sbjct: 241 ESPTLTINPNIKSLEDIETWVTRDDFEVTGYQCHDAIQYPFSV 283


>gi|242216400|ref|XP_002474008.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726873|gb|EED80809.1| predicted protein [Postia placenta Mad-698-R]
          Length = 203

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 22/187 (11%)

Query: 86  KDGELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           ++G+LGP+YG QWR +         DY G  +DQ++  ++ +R DP  RR I+SAWN A 
Sbjct: 31  REGDLGPVYGFQWRHFGARYTDCDADYSGQGVDQLAECIRKIREDPTDRRIILSAWNPA- 89

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
            D    P             +LSC LYQRS D+ LGIPFNIASY+LLT ++A +   +  
Sbjct: 90  -DAPDAP------------RRLSCLLYQRSADLGLGIPFNIASYALLTHLVAHLTQTEPH 136

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E I  LGD H+Y +H +    QL R+PR  P +  N  + D+  F+ ED  +  Y+P+  
Sbjct: 137 ELIIQLGDAHVYRDHVDALKEQLERTPRPFPTLRWNRRVEDVDDFKAEDIAVEGYQPYPP 196

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 197 IAMKMSV 203


>gi|221194598|ref|ZP_03567655.1| thymidylate synthase [Atopobium rimae ATCC 49626]
 gi|221185502|gb|EEE17892.1| thymidylate synthase [Atopobium rimae ATCC 49626]
          Length = 282

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 123/241 (51%), Gaps = 8/241 (3%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D T   T   FG   R+DL + FP LT ++   KS + E+LW  +  SN   +H     
Sbjct: 32  EDGTPAYTIKKFGVCNRYDLREEFPALTLRRTALKSAMDEVLWIYQKKSN--NVHDLNSH 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD+ G +G  YG Q      Y     DQ+  ++  L+ +P+SRR + + +  A +
Sbjct: 90  IWDAWADESGSIGKAYGYQVGQKSHYAEGDFDQMDRVLYDLQNNPFSRRIMTNLYTFADL 149

Query: 139 DKMALPPC--HCLFQFYVDNG----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            +M L PC  + ++    + G     L+  L QRS D+     +N+  Y++L MM+A V 
Sbjct: 150 SEMNLYPCAFNAIYNVTQNPGDAKPTLNLLLVQRSQDILAANNWNVCQYAILLMMVAQVS 209

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G Q GE +H + D H+Y+ H +     +SR     P + +NP++ D  +F  +D  + +Y
Sbjct: 210 GMQAGELVHMISDAHIYDRHVDIVRELISRPIFAAPHVSLNPDVTDFYAFTTDDLIVENY 269

Query: 253 E 253
           E
Sbjct: 270 E 270


>gi|197334528|ref|YP_002155215.1| thymidylate synthase [Vibrio fischeri MJ11]
 gi|197316018|gb|ACH65465.1| thymidylate synthase [Vibrio fischeri MJ11]
          Length = 283

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D++ G FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCKRIVDEGTWIENERTGKRCLTVINADLTYDVANGQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           ++ ++RG  N     + G   WD  A+             D ++G +YGVQ R+W   +G
Sbjct: 61  MIGYIRGYDNAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRAWAKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  I+  L      R  I++ +N    D   L PC     F +    L     QR
Sbjct: 121 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G+  H + + H+Y +  E   ++QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQNVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 241 QAPIFKINPEIKSLEDLETWVTMDDFEVIGYESHDAIKYPFSV 283


>gi|328955412|ref|YP_004372745.1| thymidylate synthase [Coriobacterium glomerans PW2]
 gi|328455736|gb|AEB06930.1| thymidylate synthase [Coriobacterium glomerans PW2]
          Length = 282

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 118/240 (49%), Gaps = 10/240 (4%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGVS 78
           D     T  +FG   R+DL + FP LT ++   KS + E+LW + R  +NV  L+ H   
Sbjct: 33  DGASAYTLKSFGVTARYDLREEFPALTLRRTALKSAMDEVLWIYQRKSNNVHDLNSH--- 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD+ G +G  YG Q      Y     DQ+  ++  L   PYSRR + S +  A +
Sbjct: 90  IWDRWADESGSIGKAYGYQIAQLSRYPEGEFDQMDRVLYDLSHTPYSRRIMTSTYTFADL 149

Query: 139 DKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
             M L PC     + V      D   L+  L QRS DV     +N+  Y+LL MM+A V 
Sbjct: 150 SDMHLYPCAYSCTYNVTRCPGDDALTLNMVLMQRSQDVLAANNWNVCQYALLLMMVAQVS 209

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G   GE +H + D H+Y+ H E     + R     P++ +NP++ D  +F  +D  +  Y
Sbjct: 210 GMIPGELLHVIADAHIYDRHVEIVRELIGRPRHPAPKVALNPDVTDFYAFTTDDLLVCDY 269


>gi|221133983|ref|ZP_03560288.1| thymidylate synthase [Glaciecola sp. HTCC2999]
          Length = 283

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 135/277 (48%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QY DL + +I  G     +RTG    +     + ++++   FPL+TT+K  +K+ + E
Sbjct: 1   MRQYEDLCQRIIDEGEWVYNERTGKRCLTLINADLEYNVADNEFPLVTTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+++             ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDNAADFRAIGCNTWNANANENSAWLNNPHRKGEDDMGRVYGVQGRRWMTPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+ SIV  L     SR  I++ +N    +   L PC     F +  GKL    +QR
Sbjct: 121 REIDQLKSIVDDLSKGIDSRGEILTFYNPGEFEYGCLRPCMHTHHFSLLGGKLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S D+ LGI FN     +L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SADIPLGINFNQVQVFVLLALMAQITGHKPGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
             P++ INP I  L         +DF +  YE H  I
Sbjct: 241 PAPKLTINPKIKTLADIETWVTTDDFKVEGYECHEPI 277


>gi|90412457|ref|ZP_01220460.1| thymidylate synthase [Photobacterium profundum 3TCK]
 gi|90326494|gb|EAS42900.1| thymidylate synthase [Photobacterium profundum 3TCK]
          Length = 283

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G      RT     +     + FD++   FPL+TT+K  WKS + E
Sbjct: 1   MKQYLELCQRIVDDGVWIENKRTNKRCLTVVNADLTFDVANNQFPLITTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+          + GE  +G +YGVQ RSW   DG
Sbjct: 61  LLGYIRGYDNAADFRALGTKTWDMNANDNLAWLNNPHRKGEDDMGRVYGVQGRSWQKSDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 STIDQLRKIVDNLSEGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN +  Y+LL +M A + G + G   H + + H+Y +      D+QL+R+P
Sbjct: 181 SCDVPLGLNFNQVQVYTLLALM-AQITGKKPGLAYHKIINAHIYEDQLPLLRDVQLTRTP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++IINP I  L         +DF +  YE H AI    SV
Sbjct: 240 FASPKLIINPKIKSLEDLETWVTMDDFEVIGYEHHEAIKYPFSV 283


>gi|254362290|ref|ZP_04978403.1| thymidylate synthase [Mannheimia haemolytica PHL213]
 gi|261492795|ref|ZP_05989342.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494839|ref|ZP_05991317.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153093867|gb|EDN74799.1| thymidylate synthase [Mannheimia haemolytica PHL213]
 gi|261309550|gb|EEY10775.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311477|gb|EEY12633.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 283

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + +D+ KG FPL+TT++ +WK+ + E
Sbjct: 1   MKQYLDLCNRIVSEGKWVANERTGKHCLTVINADLTYDVEKGEFPLVTTRRSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYDG 106
           LL ++RG SN +   + G   WD  A+++ +            +G +YG   R++P  DG
Sbjct: 61  LLGYIRGYSNAADFRQLGTKSWDANANENAQWLANPYRKGEDDMGLVYGAVGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++        L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKKGIDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++IINP+I  L         +DF +  YE H AI    SV
Sbjct: 240 LNAPKLIINPDIKSLEDLETWVSLDDFKVEGYEYHPAIQYPFSV 283


>gi|167623004|ref|YP_001673298.1| thymidylate synthase [Shewanella halifaxensis HAW-EB4]
 gi|189036944|sp|B0TIU4|TYSY_SHEHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|167353026|gb|ABZ75639.1| Thymidylate synthase [Shewanella halifaxensis HAW-EB4]
          Length = 283

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G+     RTG    +     + +++ K  FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLDLCQRIIDEGTWVENSRTGKRCLTVINADLVYNVDKNEFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G + W+  A+ +             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRKIGCNTWNANANDNQAWLNNPHRKGVDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GTIDQLRKIVDDLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +  E   D+Q+ R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKAGTAFHKIVNAHIYEDQLELMRDVQIKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
           + P+++INP+I  L         +DF +  YE H AI    SV
Sbjct: 241 SSPKLVINPDIKSLEDLETWVTMDDFEVTGYEHHEAIKYPFSV 283


>gi|315127380|ref|YP_004069383.1| thymidylate synthase [Pseudoalteromonas sp. SM9913]
 gi|315015894|gb|ADT69232.1| thymidylate synthase [Pseudoalteromonas sp. SM9913]
          Length = 283

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G      RTG    +     + +D++   FP++TT+K ++K+ + E
Sbjct: 1   MKQYLELCQRIVDQGQWIENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL +LRG  +       G   WD  A+++             ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDSAEQFRNIGCKTWDANANENSAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ++ ++ +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKITNAHIYENQLDLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 ASPQLKINPEIKSLEDIETWVTRDDFEVVGYQCHEAIQYPFSV 283


>gi|255281701|ref|ZP_05346256.1| thymidylate synthase [Bryantella formatexigens DSM 14469]
 gi|255267768|gb|EET60973.1| thymidylate synthase [Bryantella formatexigens DSM 14469]
          Length = 281

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 16/269 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTG--VGTRSTFGYQMRFDLSKGFPLLTTKKVHWK 53
           + +  R +++ G+D R        + TG    T   FG   R+DL + FP LT +++  K
Sbjct: 8   FKETCRDILENGTDTRGEKVRPRWEDTGEFAYTIKKFGVVNRYDLRREFPALTLRRIALK 67

Query: 54  SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
           S + E+LW  +  SN   +H     IWD+WAD+ G +G  YG   R    Y G   DQ+ 
Sbjct: 68  SAMDEILWIYQKKSN--NIHDLNSHIWDQWADESGSIGTCYGDVIRRKFLYKGEETDQMD 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK----LSCQLYQRSGD 169
            +++ LR +PYSRR + + +    +   AL PC     + V   +    L+  L QRS D
Sbjct: 126 YVLRQLRENPYSRRIMTNMYQYEYLHSGALDPCCYSMTYNVTKTEEGLVLNAVLNQRSQD 185

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           +     +N+A Y++L MM+A V     GE +H + D H+Y+ H       L+R     P+
Sbjct: 186 MLAANGWNVAQYAILLMMVAQVNHMIPGELVHIIADAHIYDRHVPVIRELLTREEHPAPK 245

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           + +NP + D  +F   D  +  YE    I
Sbjct: 246 VWLNPEVTDFYAFTTADLHVEDYETGEQI 274


>gi|261868754|ref|YP_003256676.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261414086|gb|ACX83457.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 283

 Score =  138 bits (348), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL R +I  G     +RTG    +     + +D+ +  FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIIDEGVWVENERTGKRCLTVINANLTYDVVNNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ RSW   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++ +N    D   L PC     F + +  L    YQR
Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTNTFSLLDDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAFHQIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P + INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPSPTLEINPDIKSLADLETWVTMDDFKVTGYQCHEPIKYPFSV 283


>gi|89072546|ref|ZP_01159118.1| thymidylate synthase [Photobacterium sp. SKA34]
 gi|89051650|gb|EAR57103.1| thymidylate synthase [Photobacterium sp. SKA34]
          Length = 283

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLALCQRIVDEGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+          + GE  +G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDNAAQFRAIGCNTWNANANDNPAWLNNPHRKGEDDMGRVYGVQGRRWQKTDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +  E   D+QL R+P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKRTPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  YE H  I    SV
Sbjct: 241 ASPQLKINPKIKSLEDLETWVTLDDFEVVGYEHHDPIQYPFSV 283


>gi|56459618|ref|YP_154899.1| thymidylate synthase [Idiomarina loihiensis L2TR]
 gi|62901214|sp|Q5R064|TYSY_IDILO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|56178628|gb|AAV81350.1| Thymidylate synthase [Idiomarina loihiensis L2TR]
          Length = 283

 Score =  138 bits (347), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 137/277 (49%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G   + +RTG+   +     + +D++   FPL+TT+K ++KS + E
Sbjct: 1   MKQYLQLCQRIVDEGVWVKNERTGINCLTVINADLEYDVANNQFPLITTRKSYYKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106
           LL +LRG ++ +     G   WD  A+++          GE  +G +YGVQ RSW   DG
Sbjct: 61  LLGYLRGYNSAAQFRDIGCKTWDANANENQAWLNNPNRKGEDDMGRVYGVQGRSWQKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  ++ +L      R  IV+ +N    +   L PC     F +    L    YQR
Sbjct: 121 SHLDQLKKVINNLSKGIDDRGEIVTFYNPGEFELGCLRPCMHTHNFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y N  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFALLALVAQITGHKPGKAYHKIVNAHIYENQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAI 258
             PQ+ INP I  L         +DF +  Y+ H  I
Sbjct: 241 PSPQLHINPEIKSLEDIETWVSKDDFIVSGYQCHDPI 277


>gi|293390604|ref|ZP_06634938.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951138|gb|EFE01257.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 283

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R +I  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIIDEGVWVENERTGKRCLTVINANLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ RSW   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++ +N    D   L PC     F + +  L    YQR
Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLDDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAFHQIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P + INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPSPTLEINPDIKSLADLETWVTMDDFKVTGYQCHEPIKYPFSV 283


>gi|312884030|ref|ZP_07743747.1| thymidylate synthase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368488|gb|EFP96023.1| thymidylate synthase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 283

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G     +RTG    +     + +D++   FPL+TT+K +WK+ V E
Sbjct: 1   MRQYLDLCQRIVQHGEWIENERTGKRCLTVINADLTYDVANHQFPLVTTRKSYWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANQNEAWLKNAYRKGSDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  I++ L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIIEDLARGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+        ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYAFLAIVAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP+I  L         +DF++  YE H  I    SV
Sbjct: 241 KAPSFQINPDIKSLEDLETWVTLDDFSVEGYEHHEPIQYPFSV 283


>gi|308234518|ref|ZP_07665255.1| thymidylate synthase [Atopobium vaginae DSM 15829]
 gi|328944113|ref|ZP_08241578.1| thymidylate synthase [Atopobium vaginae DSM 15829]
 gi|327492082|gb|EGF23856.1| thymidylate synthase [Atopobium vaginae DSM 15829]
          Length = 282

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 19/266 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++ + + +I+ G+  +         D T   T   FG   R+DL + FP LT ++   KS
Sbjct: 8   FISMCKDIIEHGTTTQGEKVRPHWEDGTSAYTIKKFGVCNRYDLREEFPALTLRRTALKS 67

Query: 55  VVHELLW-FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + E+LW + +  +N+  LH H   IWD WAD+ G +G  YG Q      Y    +DQ+ 
Sbjct: 68  AMDEILWIYQKKSNNIHDLHSH---IWDSWADETGSIGKAYGYQIGVKNHYPEGDMDQMD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPC--HCLFQFYVDNGK----LSCQLYQRS 167
            ++  L+ +PYSRR + S +  A + +M L PC    ++    + G     L+  L QRS
Sbjct: 125 KVLYDLKHNPYSRRIMTSTYTFADLSQMNLYPCAYSAIYNVTHEEGNPQPTLNMLLIQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  Y++L MM+A V   Q GE +H + D H+Y+ H +     ++R     
Sbjct: 185 QDILAANNWNVCQYAILLMMVAQVNHMQAGELVHMISDAHIYDRHVDIVKELITRPTYPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYE 253
           P + +NP+I +   F  +D  + +Y+
Sbjct: 245 PLVHLNPDIHNFYEFTTDDLIVENYQ 270


>gi|157960852|ref|YP_001500886.1| thymidylate synthase [Shewanella pealeana ATCC 700345]
 gi|189036945|sp|A8H1B4|TYSY_SHEPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157845852|gb|ABV86351.1| Thymidylate synthase [Shewanella pealeana ATCC 700345]
          Length = 283

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G+     RTG    +     + + + K  FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLDLCQRLIDEGTWVENSRTGKRCLTVINADLVYHVDKNEFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G + W+  A+ +             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRAIGCNTWNANANDNQAWLDNPHRKGIDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GCIDQLRKIVDDLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLVGDTLHLTSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +  E   ++QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKPGTAFHKIVNAHIYEDQLELMQEVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
           T P+++INPNI  L         +DF +  YE H AI    SV
Sbjct: 241 TSPKLVINPNIKSLEDLETWVSIDDFEVTGYEHHEAISYPFSV 283


>gi|145636964|ref|ZP_01792628.1| thymidylate synthase [Haemophilus influenzae PittHH]
 gi|145269822|gb|EDK09761.1| thymidylate synthase [Haemophilus influenzae PittHH]
          Length = 283

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++ G  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIHGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|54307786|ref|YP_128806.1| thymidylate synthase [Photobacterium profundum SS9]
 gi|62901317|sp|Q6LUM1|TYSY_PHOPR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|46912209|emb|CAG19004.1| putative thymidylate synthetase (thyA) [Photobacterium profundum
           SS9]
          Length = 283

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G      RT     +     + FD++   FPL+TT+K  WKS + E
Sbjct: 1   MKQYLELCQRIVDDGVWIENKRTNKRCLTVVNADLTFDVANNQFPLITTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+          + GE  +G +YGVQ RSW   DG
Sbjct: 61  LLGYIRGYDNAADFRALGTKTWDMNANDNLAWLNNPHRKGEDDMGRVYGVQGRSWQKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 STIDQLRKIVDNLSEGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +      D+QL+R+P 
Sbjct: 181 SCDVPLGLNFNQVQVYTLLALVAQITGKKPGLAYHKIINAHIYEDQLSLLRDVQLTRTPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P++IINP I  L         +DF +  YE H AI    SV
Sbjct: 241 AAPKLIINPKIKCLEDLETWVTMDDFDVIGYEHHEAIKYPFSV 283


>gi|71658760|sp|Q5E7P1|TYSY_VIBF1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 283

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D+  G FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDEGTWIENERTGKRCLTVINADLTYDVENGVFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           ++ ++RG  +     + G   WD  A+             D ++G +YGVQ RSW   +G
Sbjct: 61  MIGYIRGYDSAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRSWAKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  I+  L      R  I++ +N    D   L PC     F +    L     QR
Sbjct: 121 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G+  H + + H+Y +  E    +QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQSVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 241 QAPIFKINPEIKSLEDLETWVTMDDFEVIGYESHEAIKYPFSV 283


>gi|32709481|gb|AAP86759.1| thymidylate synthase [Enterobacteria phage TuIa]
          Length = 166

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 12/166 (7%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           Q+   +  ++A P  RR IVSAWN A ID+MALPPCH  +QF V NG L  Q YQRS DV
Sbjct: 1   QLVKTIDRIKALPNDRRQIVSAWNPAEIDQMALPPCHMFYQFNVRNGHLDLQWYQRSVDV 60

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
           FLG+PFNIASY+ LT ++A +     G+ + + G+ H+Y+NH EQ    + R P+ L  +
Sbjct: 61  FLGLPFNIASYAALTHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCKEVIRREPKELCSL 120

Query: 231 IIN--------PNIVDL----LSFRYEDFTLRSYEPHAAILAKVSV 264
            I         P  + +     +  + DF L++YE H AI AK++V
Sbjct: 121 EITWPSNFENWPTKIQMDWVTGTMTHTDFVLKNYESHPAIKAKMAV 166


>gi|238695118|ref|YP_002922312.1| dTMP (thymidylate) synthase [Enterobacteria phage JSE]
 gi|220029254|gb|ACL78189.1| dTMP (thymidylate) synthase [Enterobacteria phage JSE]
          Length = 407

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 100/158 (63%), Gaps = 3/158 (1%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSG 168
           DQ+  ++  ++ DPYSRR I+ +WNV       L  CH + QFYV N  KLSC  + RS 
Sbjct: 250 DQLQKVIDMIKNDPYSRRIIIDSWNVQETHNAVLGVCHPMVQFYVSNDNKLSCLFFMRSN 309

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+FLG PFN+ASY+LLT ++A + G + GE ++  GD H+Y NHF+Q   QLSR P   P
Sbjct: 310 DLFLGNPFNVASYALLTHIIAKICGLEVGELVYQCGDCHIYKNHFDQVMEQLSRVPFDKP 369

Query: 229 --QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             ++    ++ ++L+   +DF + +Y+ H AI A+++V
Sbjct: 370 IIELPEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 407



 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 18/120 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL LLR V+  G  R DRTGVGT S FG +MR DLSKGFPLLTTKK+   SV+ ELL
Sbjct: 1   MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATASVIGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------DKDG------ELGPIYGVQWRSWP 102
           WF+ G  +   L       +DE A            +K+        +G +YG+ WR  P
Sbjct: 61  WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMAWRRKP 120


>gi|330447405|ref|ZP_08311054.1| thymidylate synthase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491596|dbj|GAA05551.1| thymidylate synthase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 283

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 132/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLALCQRIVDDGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+          + GE  +G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDNAAQFRAIGCNTWNANANDNQAWLNNPHRKGEDDMGRVYGVQGRRWQKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  YE H  I    SV
Sbjct: 241 ASPQLKINPKIKSLEDLETWVTLDDFEVIGYEHHDVIQYPFSV 283


>gi|218280886|ref|ZP_03487510.1| hypothetical protein EUBIFOR_00068 [Eubacterium biforme DSM 3989]
 gi|218217820|gb|EEC91358.1| hypothetical protein EUBIFOR_00068 [Eubacterium biforme DSM 3989]
          Length = 287

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 35/282 (12%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L + +++ G    +RTG+ T          D+SK FP+LTTK++  +  V E+LW  
Sbjct: 8   YCGLCKDILENGVQVHNRTGIDTIKIPSAHFHLDVSKEFPILTTKQLFIRQAVTEMLWIY 67

Query: 64  RGDSN-VSYLHRHGVSIWDEWA-DKDGE--------------------LGPIYGVQWRSW 101
           +  SN V +L    V IWD+W  ++DG+                    +G  YG      
Sbjct: 68  QAQSNDVRWLQERNVHIWDKWEINEDGDWIDENTGNVLKHFDPSFAHTIGTAYG------ 121

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             Y     D ++ ++ SL+ D   RR ++S W  + +D   LP C    ++ V +GKL+ 
Sbjct: 122 --YIVKKYDLMNKLLNSLKNDKEDRRRVISLWQDSELDTAVLPSCVWSSEWDVTDGKLNI 179

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            ++QRS DV LG+PFN+  Y++L MM+A V G + G    ++ D H+Y N  +    QL+
Sbjct: 180 WVHQRSCDVPLGLPFNVTQYAVLLMMVAQVTGLKPGTIDWSIKDAHIYVNQVDGIKEQLN 239

Query: 222 RSPRT----LPQMIINPNIVDLLSFR-YEDFTLRSYEPHAAI 258
           R         P++ +NP++ D   F   +D  L  YE    I
Sbjct: 240 RYETKGSLPAPELWLNPDVTDFYDFDPTKDVKLNGYEHMGKI 281


>gi|169618784|ref|XP_001802805.1| hypothetical protein SNOG_12584 [Phaeosphaeria nodorum SN15]
 gi|160703681|gb|EAT79882.2| hypothetical protein SNOG_12584 [Phaeosphaeria nodorum SN15]
          Length = 256

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 115/215 (53%), Gaps = 40/215 (18%)

Query: 2   HQYLDL-LRHVIKFGSDRRDRTGVGTRS-TFGYQMRFDLSKG-----------FPLLTTK 48
           +QYL+  +RH  +  S       +GT +  F  Q++F LS+             PLLTTK
Sbjct: 42  YQYLNHDIRHPSQMASTAPTAPALGTYALPFPPQLKFTLSRPSTDPSSPPDLILPLLTTK 101

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    +            +GELGP+YG 
Sbjct: 102 RVFTRAVIAELLWFIAGSTHSQPLSDAGIKIWDGNGSRAYLDSVGLNHYEEGELGPVYGF 161

Query: 97  QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ ++  ++  PY RR I+SAWN A + KMALPPCH 
Sbjct: 162 QWRHFGAEYKGHAHDYTGEGVDQLADVIDKIKNKPYDRRIILSAWNPADLKKMALPPCHM 221

Query: 149 LFQFYVD--NGK-----LSCQLYQRSGDVFLGIPF 176
             QFYV   NGK     L   LYQRS D+ LG+PF
Sbjct: 222 FAQFYVSFPNGKERRGVLHSLLYQRSCDMGLGVPF 256


>gi|261344767|ref|ZP_05972411.1| hypothetical protein PROVRUST_06031 [Providencia rustigianii DSM
           4541]
 gi|282567211|gb|EFB72746.1| thymidylate synthase [Providencia rustigianii DSM 4541]
          Length = 283

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 134/277 (48%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M  YL+L + +I  G      RTGV   +     + +D+    FPL+TT+K  +K+ + E
Sbjct: 1   MKPYLELCQRIIDEGQWVENKRTGVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+++          GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYLRGYDNAAQFREIGCNTWNANANENPAWLANPHRKGEDDMGRVYGVQGRTWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  +V +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 THLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQCFVLLALIARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPY 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
             P++ INP I  L         +DF L  Y+ H AI
Sbjct: 241 PSPRLTINPEIKTLEDLETWVTTDDFMLDGYQCHEAI 277


>gi|139436967|ref|ZP_01771127.1| Hypothetical protein COLAER_00100 [Collinsella aerofaciens ATCC
           25986]
 gi|133776614|gb|EBA40434.1| Hypothetical protein COLAER_00100 [Collinsella aerofaciens ATCC
           25986]
          Length = 282

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 17/267 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
            Q++ + R ++  G+            D T   T   FG   R+DL + FP LT ++   
Sbjct: 6   QQFVAMCRDILDHGTTTEGQKVRPVWEDGTPAYTIKNFGVTARYDLREEFPALTLRRTAL 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS + E+LW  +  SN   +H     IWDEWAD+ G +G  YG Q      Y     DQ+
Sbjct: 66  KSAMDEILWIYQKKSN--NVHDLNSHIWDEWADETGSIGKAYGYQIGQKSHYAEGDFDQM 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQR 166
             ++  L+  PYSRR + + +  + + +M L PC     + V      D   L+  L QR
Sbjct: 124 DRVLYDLKHTPYSRRIMTNTYVFSDLSEMHLYPCAYSVTYNVTQRPQDDKPTLNMILNQR 183

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S D+     +N+  Y++L MM+A  +    GE +H + D H+Y+ H +     + R    
Sbjct: 184 SQDILAANNWNVCQYAILLMMVAQSVDMIPGELLHVIADAHIYDRHVDIVRELIERPQFA 243

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYE 253
            P++ +NP++ D  +F  +D  +  YE
Sbjct: 244 APKVTLNPDVHDFYAFTTDDLIVEGYE 270


>gi|251791893|ref|YP_003006613.1| thymidylate synthase [Aggregatibacter aphrophilus NJ8700]
 gi|247533280|gb|ACS96526.1| thymidylate synthase [Aggregatibacter aphrophilus NJ8700]
          Length = 283

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCQRIVDEGVWIENERTGKRCLTVINASLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRNWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAFHHIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              PQ+ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPSPQLEINPDIKSLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283


>gi|239994617|ref|ZP_04715141.1| thymidylate synthase [Alteromonas macleodii ATCC 27126]
          Length = 88

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 58/88 (65%), Positives = 73/88 (82%)

Query: 8  LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
          +RHV   G  + DRTG GT S FGYQMRF+L +GFPL+TTKK H KS++HELLWFL+G++
Sbjct: 1  MRHVRDTGVKKEDRTGTGTLSVFGYQMRFNLQEGFPLVTTKKCHLKSIIHELLWFLKGET 60

Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYG 95
          N++YL  HGVSIWDEWA ++GELGP+YG
Sbjct: 61 NIAYLKEHGVSIWDEWATEEGELGPVYG 88


>gi|311992971|ref|YP_004009838.1| Td thymidylate synthetase [Acinetobacter phage Acj61]
 gi|295815260|gb|ADG36186.1| Td thymidylate synthetase [Acinetobacter phage Acj61]
          Length = 317

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 144/309 (46%), Gaps = 45/309 (14%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M +Y   LR +I  G D   DRTGVGT + FG   ++D+S+  P+LT +KV WKS+V E+
Sbjct: 9   MREYDLALRDIIDNGFDIDGDRTGVGTVAKFGINTKYDISERVPVLTKRKVAWKSIVKEV 68

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK---------DGELGPIYG--------------- 95
           LW++ G SN++ L   G  IW  W  K         +G  G +YG               
Sbjct: 69  LWYISGSSNINDLEAMGAKIWTPWKSKEFETKHGFVEGSAGYVYGFNLIHFGADVKQVES 128

Query: 96  ---VQWRSWPDYDGNVID----------QISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
               +   + + D +++D          Q+  ++ +LRA+P SR+   + W     ++  
Sbjct: 129 RRLAEQNPFNNVDEHMLDKIYPKSKGFNQLDYVINTLRANPKSRQACFTFWRPDTNNQAI 188

Query: 143 LPPCHCLFQFYV---DNGK---LSCQLYQRSGDVFLGIPF-NIASYSLLTMMLASVIGFQ 195
           LP CH  + F V   +NG+   L+C L+QRS D  +G+   NI + +L T M+A  +G +
Sbjct: 189 LPACHAFYSFIVSPDENGEMNVLNCHLFQRSADYPIGVGMGNIWTATLFTYMIAQQLGMK 248

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
            G   H+    H+Y N  +     L R       ++       +  +  EDF L  Y P 
Sbjct: 249 PGHVYHSGAHCHVYKNAIDATVEYLEREDEPDSPILKLNKRDSIYDYVPEDFELIDYNPL 308

Query: 256 AAILAKVSV 264
             I   ++V
Sbjct: 309 PPIKFDIAV 317


>gi|254509415|ref|ZP_05121496.1| thymidylate synthase [Vibrio parahaemolyticus 16]
 gi|219547652|gb|EED24696.1| thymidylate synthase [Vibrio parahaemolyticus 16]
          Length = 283

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + +++ G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVEHGEWIENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INPNI  L         +DF +  YE H AI    SV
Sbjct: 241 KAPTFHINPNIKSLEDLETWVTLDDFWVEGYEHHDAIKYPFSV 283


>gi|226327104|ref|ZP_03802622.1| hypothetical protein PROPEN_00969 [Proteus penneri ATCC 35198]
 gi|225204322|gb|EEG86676.1| hypothetical protein PROPEN_00969 [Proteus penneri ATCC 35198]
          Length = 283

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 134/278 (48%), Gaps = 21/278 (7%)

Query: 1   MHQYLDLLRHVIKFGS--DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57
           M QYL L + +I  G   D + RTG    +     + +D++   FPL+TT+K  +K+ + 
Sbjct: 1   MKQYLALCQRIIDEGQWIDNK-RTGTRCLTVINADLEYDVANNQFPLITTRKSFYKAAIA 59

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYD 105
           ELL +LRG  N       G + W+  A+++G            ++G +YGVQ R W   D
Sbjct: 60  ELLGYLRGYDNAGQFREIGCNTWNANANENGAWLNNPHRKGEDDMGRVYGVQGRQWQRPD 119

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G+  DQ+  ++ +L      R  IV+ +N    +   L PC     F +    L    YQ
Sbjct: 120 GSHFDQLRKVIDNLTKGIDDRGEIVTFYNPGETELGCLRPCMHTHTFSLVGDTLYLTSYQ 179

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           RS DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R P
Sbjct: 180 RSCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAFHKIINAHIYENQLPLMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
             LP + INP I  L         +DFT+  Y+ H AI
Sbjct: 240 LPLPTLHINPKIKTLEDIETWVTTDDFTVEGYQCHEAI 277


>gi|59711067|ref|YP_203843.1| thymidylate synthase [Vibrio fischeri ES114]
 gi|59479168|gb|AAW84955.1| thymidylate synthetase [Vibrio fischeri ES114]
          Length = 285

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           + QYLDL + ++  G+    +RTG    +     + +D+  G FPL+TT+K  WK+ V E
Sbjct: 3   VKQYLDLCQRIVDEGTWIENERTGKRCLTVINADLTYDVENGVFPLVTTRKSFWKAAVAE 62

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           ++ ++RG  +     + G   WD  A+             D ++G +YGVQ RSW   +G
Sbjct: 63  MIGYIRGYDSAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRSWAKPNG 122

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  I+  L      R  I++ +N    D   L PC     F +    L     QR
Sbjct: 123 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQR 182

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G+  H + + H+Y +  E    +QL R P 
Sbjct: 183 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQSVQLKREPL 242

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 243 QAPIFKINPEIKSLEDLETWVTMDDFEVIGYESHEAIKYPFSV 285


>gi|209694165|ref|YP_002262093.1| thymidylate synthase [Aliivibrio salmonicida LFI1238]
 gi|208008116|emb|CAQ78258.1| thymidylate synthase [Aliivibrio salmonicida LFI1238]
          Length = 285

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           + QYLDL + ++  G+    +RTG    +     + +D++ G FPL+TT+K  WKS V E
Sbjct: 3   VKQYLDLCQRIVSEGTWIENERTGKRCLTVINADLTYDVANGEFPLVTTRKSFWKSAVAE 62

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           ++ ++RG  N     + G   WD  A+          + GE  +G +YGVQ RSW   +G
Sbjct: 63  MIGYIRGYDNAEDFRQIGTKTWDANANLNNAWLNNPHRKGEDDMGRVYGVQGRSWAKPNG 122

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  I+  L      R  I++ +N    D   L PC     F +    L     QR
Sbjct: 123 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDIGCLRPCMYSHHFSLLGDTLYLNSTQR 182

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 183 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNGHIYEDQLELMKDVQLKREPL 242

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 243 KAPVFKINPKITSLEDLETWVTMDDFEVIGYESHEVIKYPFSV 285


>gi|33620591|ref|NP_891806.1| dTMP (thymidylate) synthase [Enterobacteria phage RB49]
 gi|33348058|gb|AAQ15459.1| dTMP (thymidylate) synthase [Enterobacteria phage RB49]
          Length = 410

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 2/157 (1%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+ ++++ ++ +P  RR I+ +WNV       L  CH   QFYV+ GKLSC  +QRS D
Sbjct: 254 DQLQNVIEQIKNNPTDRRIIIDSWNVQGTHNAVLGVCHPFVQFYVNEGKLSCMWFQRSVD 313

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
            FLG+PFN+ASY+LLT ++A +   + GE I + GD H+Y NHF+Q   QLSR P   P 
Sbjct: 314 SFLGLPFNVASYALLTHIIAKMCDLEVGELIFSGGDTHIYKNHFDQVMEQLSRVPFDKPT 373

Query: 230 MIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + +    ++ ++L+   +DF + +Y+ H AI A+++V
Sbjct: 374 IELPEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 410



 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 18/120 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL LLR V+  G  R DRTGVGT S FG +MR DLSKGFPLLTTKK+   SV+ ELL
Sbjct: 1   MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATASVIGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------DKDG------ELGPIYGVQWRSWP 102
           WF+ G  +   L       +DE A            +K+        +G +YG+ WR  P
Sbjct: 61  WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMAWRRKP 120


>gi|204789674|gb|ACI02050.1| hypothetical protein [uncultured bacterium]
          Length = 285

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 121/253 (47%), Gaps = 10/253 (3%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77
            D T   T   FG   R+DL K  P++T +K   KS   ELLW  +  SN V+ L  H  
Sbjct: 36  EDGTSAYTIKKFGVVNRYDLRKECPIITLRKTALKSATDELLWIWQKKSNNVNELSSH-- 93

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
            IWDEWAD+ G +G  YG Q      Y   ++DQ+  ++  L+ +P+SRR + + +    
Sbjct: 94  -IWDEWADETGSIGKAYGYQMGVKHQYKEGMMDQVDRVIFDLKNNPFSRRIMTNIYVHQD 152

Query: 138 IDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           + +M L PC     F V      D   L   L QRS DV     +N+  Y++L  MLA  
Sbjct: 153 LHEMNLYPCAYSMTFNVTQRKGEDKLTLHAILNQRSQDVLTANNWNVVQYAVLVHMLAQC 212

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
                GEF+H + D H+Y+ H    +  + R     P+  +NP+I D   F  +D  +  
Sbjct: 213 CDMYVGEFMHVIADAHIYDRHIPLVEELIKRPVFDAPKFFMNPDIKDFYKFTKDDVWVEG 272

Query: 252 YEPHAAILAKVSV 264
           Y+    I   V++
Sbjct: 273 YQYGEQISIPVAI 285


>gi|149192450|ref|ZP_01870644.1| thymidylate synthase [Vibrio shilonii AK1]
 gi|148833716|gb|EDL50759.1| thymidylate synthase [Vibrio shilonii AK1]
          Length = 283

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDEGVWIENERTGKRCLTVINADLTYDVANNAFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLSKGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 AAPTFRINPKIKTLEDLETWVTLDDFEVEGYECHEPIRYPFSV 283


>gi|197286164|ref|YP_002152036.1| thymidylate synthase [Proteus mirabilis HI4320]
 gi|227357284|ref|ZP_03841641.1| thymidylate synthase [Proteus mirabilis ATCC 29906]
 gi|194683651|emb|CAR44584.1| putative thymidylate synthase [Proteus mirabilis HI4320]
 gi|227162547|gb|EEI47536.1| thymidylate synthase [Proteus mirabilis ATCC 29906]
          Length = 283

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 136/278 (48%), Gaps = 21/278 (7%)

Query: 1   MHQYLDLLRHVIKFGS--DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57
           M QYL L + +I  G   D + RTG    +     + +D++   FPL+TT+K  +K+ + 
Sbjct: 1   MKQYLALCQRIIDEGEWIDNK-RTGTRCLTVINADLEYDVANNQFPLITTRKSFYKAAIA 59

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYD 105
           ELL +LRG  N +     G + W+  A+++             ++G +YGVQ R W   D
Sbjct: 60  ELLGYLRGYDNAAQFRAIGCNTWNANANENSAWLNNPHRKGEDDMGRVYGVQGRQWQRPD 119

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G+  DQ+  +V +L      R  IV+ +N        L PC     F +   +L    YQ
Sbjct: 120 GSHFDQLRKVVDNLTNGIDDRGEIVTFYNPGETALGCLRPCMHTHTFSLLGDRLYLTSYQ 179

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           RS DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R P
Sbjct: 180 RSCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAFHKIVNAHIYENQLPLMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
             LP++ INPNI  L         +DF++  Y+ H AI
Sbjct: 240 LPLPKLHINPNIKTLDDIETWVTTDDFSVEGYQCHEAI 277


>gi|315633683|ref|ZP_07888973.1| thymidylate synthase [Aggregatibacter segnis ATCC 33393]
 gi|315477725|gb|EFU68467.1| thymidylate synthase [Aggregatibacter segnis ATCC 33393]
          Length = 283

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCQRIVNEGVWVENERTGKRCLTVINAGLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ RSW   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +      D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAFHHIVNAHIYEDQLALMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              PQ+ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPSPQLEINPDIKSLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283


>gi|163752421|ref|ZP_02159613.1| thymidylate synthase [Shewanella benthica KT99]
 gi|161327680|gb|EDP98872.1| thymidylate synthase [Shewanella benthica KT99]
          Length = 283

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L   +I  G     +RTG    +     + +++ K  FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLELCNRIIDEGCWIENERTGKRCLTVINADLVYNVEKNEFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  MLGYIRGFDNAADFRKLGAKTWDANANENQAWLNNPHRKGKDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L+     R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GTIDQLKKIVDNLKKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGKKPGQAYHKIVNAHIYEDQLELMRDVQLQREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
               + INP+I  L         +DF + +Y+ H AI    SV
Sbjct: 241 GPASLSINPDIKSLEDLETWVTMDDFEVLNYQHHDAIKYPFSV 283


>gi|157311536|ref|YP_001469579.1| Td dTMP (thymidylate) synthase [Enterobacteria phage Phi1]
 gi|149380740|gb|ABR24745.1| Td dTMP (thymidylate) synthase [Enterobacteria phage Phi1]
          Length = 406

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 2/157 (1%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+ ++++ ++ +P  RR I+ +WNV       L  CH   QFYV+ GKLSC  +QRS D
Sbjct: 250 DQLQNVIEQIKNNPTDRRIIIDSWNVQGTHNAVLGVCHPFVQFYVNEGKLSCMWFQRSVD 309

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
            FLG+PFN+ASY+LLT ++A +   + GE I + GD H+Y NHF+Q   QLSR P   P 
Sbjct: 310 SFLGLPFNVASYALLTHIIAKMCDLEVGELIFSGGDTHIYKNHFDQVMEQLSRVPFDKPT 369

Query: 230 MIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + +    ++ ++L+   +DF + +Y+ H AI A+++V
Sbjct: 370 IELPEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 406



 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 18/120 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL LLR V+  G  R DRTGVGT S FG +MR DLSKGFPLLTTKK+   SV+ ELL
Sbjct: 1   MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATSSVIGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------DKDG------ELGPIYGVQWRSWP 102
           WF+ G  +   L       +DE A            +K+        +G +YG+ WR  P
Sbjct: 61  WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMSWRRKP 120


>gi|260913764|ref|ZP_05920240.1| thymidylate synthase [Pasteurella dagmatis ATCC 43325]
 gi|260632303|gb|EEX50478.1| thymidylate synthase [Pasteurella dagmatis ATCC 43325]
          Length = 283

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 137/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G      RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCQRIVDEGVWIENKRTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+ +             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANDNEAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  +V +L      R  I++  N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKVVNNLNKGIDDRGEIITFLNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   ++QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKPGKAYHKIINAHIYEDQLELMKNVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LPQ+ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPLPQLEINPDIKTLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283


>gi|307243541|ref|ZP_07525689.1| thymidylate synthase [Peptostreptococcus stomatis DSM 17678]
 gi|306493097|gb|EFM65102.1| thymidylate synthase [Peptostreptococcus stomatis DSM 17678]
          Length = 277

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 17/241 (7%)

Query: 23  GVGTRSTFGYQM--RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR--HGV 77
           G  + + F  Q+  R+DLSKG  P++T ++V WKS + E+LW  +  SN   L R  +G+
Sbjct: 34  GTPSHTMFVNQVFERYDLSKGELPIVTLRQVAWKSGIKEILWIYQDQSNNLDLLRDKYGI 93

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           + WDEW   D  +G  YG   + +   D         ++++L+  PY RRHI++ +  A 
Sbjct: 94  TWWDEWDLGDRTIGQRYGATVKRYKLMD--------KLLENLKNQPYGRRHIINLYQEAD 145

Query: 138 IDKMA-LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196
           +++ A L PC    Q+ V +G L   L QRS DV +    N   Y  L MM+A  +G Q 
Sbjct: 146 LEETAGLYPCAMETQWSVRDGYLDLTLIQRSSDVAVANAINKIQYVALQMMVARHVGLQA 205

Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ---MIINPNIVDLLSFRYEDFTLRSYE 253
           G F H + + H+Y+ H +Q    ++R P+   +   +++NP+  +   F  +DFT+ +Y+
Sbjct: 206 GVFCHYVNNAHIYDRHIDQIKEMIARDPQEGHESVRLVLNPDKTNFYDFTLDDFTMENYD 265

Query: 254 P 254
           P
Sbjct: 266 P 266


>gi|127511974|ref|YP_001093171.1| thymidylate synthase [Shewanella loihica PV-4]
 gi|166231732|sp|A3QBR4|TYSY_SHELP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|126637269|gb|ABO22912.1| thymidylate synthase [Shewanella loihica PV-4]
          Length = 283

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L   +I  G     +RTG    +     + +D++   FPL+TT+K  WK  + E
Sbjct: 1   MKQYLALCERIINEGVWVENERTGKRCLTVINADLEYDVAANEFPLITTRKSFWKGAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +   + G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYLRGYDNAADFRKLGAKTWDANANENSAWLNNPHRKGHDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
            V+DQ+  I+ +L      R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GVVDQLRKIIDNLSKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +      ++QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFALLSIVAQITGHKPGKAYHKIVNAHIYEDQLPLMQEVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P++ INP+I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PSPKLSINPDIKSLEDLETWVTMDDFEVTGYQHHEAIQYPFSV 283


>gi|189490502|ref|YP_001957072.1| putative thymidylate synthase [Pseudomonas phage 201phi2-1]
 gi|164609567|gb|ABY63176.1| hypothetical protein 201phi2-1p350 [Pseudomonas phage 201phi2-1]
          Length = 457

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 113/251 (45%), Gaps = 74/251 (29%)

Query: 88  GELGPIYGVQWRS-----------WPDYDGN----VIDQISSIVQS-------------- 118
           G+LG +YG  WR            W DY+      V+D   + +++              
Sbjct: 207 GDLGAVYGKTWRDIEDTRVIPKYDWVDYEARGFDFVVDVPGTSIENDRCVVTRRIDQIQD 266

Query: 119 ----LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY--------------------- 153
               LR +P SRR IV AW   L+D+ ALPPCH  FQF+                     
Sbjct: 267 IIDQLRTNPDSRRIIVCAWAPQLVDEQALPPCHSFFQFWTRELTVEERIKLLRTTKPEIY 326

Query: 154 ------------------VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
                             +    +SC LYQRS D FLG PFNI  YSLLT  LA+ +   
Sbjct: 327 NVIDGTTGYFEHIADINDIPKRAISCHLYQRSVDAFLGKPFNITFYSLLTHWLANQLNMV 386

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI--VDLLSFRYEDFTLRSYE 253
             EF+ T GD H+Y+NH EQ DLQL+R P+ LP +   P     D+   R EDF + +YE
Sbjct: 387 ADEFVWTGGDCHIYSNHQEQTDLQLTREPKALPTIRFTPEAKGKDIREIRPEDFEILNYE 446

Query: 254 PHAAILAKVSV 264
            H  I  KV+V
Sbjct: 447 FHPHIAGKVAV 457



 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 1/85 (1%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
          M QYLD +  + + G  + DRTG GT+S  G Q R+ L     P++TTKK+H  S++HEL
Sbjct: 1  MQQYLDSIIDIKENGVFKGDRTGTGTQSKLGQQERYSLRDNTLPVITTKKIHLPSIIHEL 60

Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWA 84
          +W L GD+ V YL  +GV IW+EW 
Sbjct: 61 IWMLSGDTRVDYLIENGVRIWNEWV 85


>gi|18000048|gb|AAL54880.1|AF064791_1 thymidylate synthase [Pasteurella multocida]
          Length = 283

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M  YL+L + ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKHYLELCQRIVDEGVWVENERTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENSAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +LR     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVNNLRNGIDDRGEIMTFFNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  +   ++QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIINAHIYEDQLDLMKNVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LPQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 240 FPLPQLHINPEIKTLEDLETWVTMDDFKVTGYQCHDAIKYPFSV 283


>gi|332308159|ref|YP_004436010.1| thymidylate synthase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175488|gb|AEE24742.1| thymidylate synthase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 283

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++KG FPL+TT+K  +KS + E
Sbjct: 1   MKQYLDLCQRIVDEGVWVNNERTGKKCLTVINADLTYDVAKGEFPLVTTRKSFYKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106
           ++ ++RG  N +   + G S WD  A++            + + G IYG   R++P  DG
Sbjct: 61  MIGYIRGYDNAADFRKIGTSTWDANANQNQAWLDNPHRRGEDDCGLIYGKIGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID ++ I+  L+     R  I + ++        L PC     F + +  L     QR
Sbjct: 121 GSIDLLAKIIHDLKNGIDDRGEIFTFYHPGAFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGKKAGKAYHKIVNAHIYEDQLALMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            +P++IINP+I  L         +DF +  YE H AI    SV
Sbjct: 241 GIPKLIINPDIKSLKDLETWVTMDDFNIEGYEHHPAIKYPFSV 283


>gi|170725592|ref|YP_001759618.1| thymidylate synthase [Shewanella woodyi ATCC 51908]
 gi|169810939|gb|ACA85523.1| Thymidylate synthase [Shewanella woodyi ATCC 51908]
          Length = 283

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   +I  G+    +RTG    +     + ++++   FPL+TT+K  WKS + E
Sbjct: 1   MKQYLDLCNRIIDEGTWIENERTGKRCLTVINADLVYNVADNEFPLITTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106
           +L ++RG  N +   + G   WD  A++            + ++G +YGVQ R+W   DG
Sbjct: 61  MLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNSHRKGEDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L+     R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GSVDQLRKIVDNLKNGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSMLGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFALLAIVAQITGKKAGMAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
               + INP+I  L         +DF +  Y+ H AI    SV
Sbjct: 241 APASLTINPDIKSLEDLETWVTMDDFEVSGYQHHDAIKYPFSV 283


>gi|90580564|ref|ZP_01236369.1| thymidylate synthase [Vibrio angustum S14]
 gi|90438222|gb|EAS63408.1| thymidylate synthase [Photobacterium angustum S14]
          Length = 286

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 128/274 (46%), Gaps = 18/274 (6%)

Query: 3   QYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           QY +L + VI  G     +RTG    +     + +DLSK  FPL+TT+K  WKS + E+L
Sbjct: 7   QYENLCKRVIDEGVWIENERTGKRCLTIINADLEYDLSKNEFPLVTTRKAFWKSAIAEML 66

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDGNV 108
            +LRG  N +     G   WD  A+          + GE  +G +YGVQ R+W   DG  
Sbjct: 67  GYLRGYDNAADFRNIGTKTWDANANLNEAWLNNSHRKGEDDMGRVYGVQGRAWAKPDGGF 126

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +DQ   I+ +L      R  I+S +NV       L PC     F +    L     QRS 
Sbjct: 127 VDQYKKIIGNLSKGIDDRGEIMSFYNVGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQRSC 186

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV LG+ FN    + L  + A + G + G+  H + + H+Y +  +    Q+ R P + P
Sbjct: 187 DVPLGLVFNQIQVAWLLQITAQICGLKAGKAFHKIVNAHIYEDQLDLMKEQIKREPYSSP 246

Query: 229 QMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
           ++I+NP I  L         +DF +  Y  H  I
Sbjct: 247 KLIMNPKIKSLEDLETWVTVDDFEVIDYRHHEPI 280


>gi|323492567|ref|ZP_08097713.1| thymidylate synthase [Vibrio brasiliensis LMG 20546]
 gi|323313169|gb|EGA66287.1| thymidylate synthase [Vibrio brasiliensis LMG 20546]
          Length = 283

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N       G   WD  A++            + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRNLGTKTWDANANQNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 241 KAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDAIKYPFSV 283


>gi|190149384|ref|YP_001967909.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307244923|ref|ZP_07527020.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307253877|ref|ZP_07535729.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307258331|ref|ZP_07540072.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|307260572|ref|ZP_07542264.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|307262702|ref|ZP_07544330.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|189914515|gb|ACE60767.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306854088|gb|EFM86296.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306863081|gb|EFM95023.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306867515|gb|EFM99362.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306869649|gb|EFN01434.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306871957|gb|EFN03673.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 283

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + ++++ G FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P  DG
Sbjct: 61  LLGYIRGYDNAADFRKLGTKSWDANANQNSAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++  +     L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A + G + G+  H + + H+Y + FE   D+QL R P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++ INP I  L         +DF + SYE H AI    SV
Sbjct: 240 LASPKLWINPAIKSLEDLETWVTLDDFKVESYEYHPAIQYPFSV 283


>gi|213418917|ref|ZP_03351983.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
          Typhi str. E01-6750]
          Length = 93

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 79/93 (84%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1  MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60

Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
          WFL+GD+N++YLH + V+IWDEWAD++G+LGP+
Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 93


>gi|165975571|ref|YP_001651164.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303251939|ref|ZP_07338110.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247098|ref|ZP_07529150.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|165875672|gb|ABY68720.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|302649369|gb|EFL79554.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306856347|gb|EFM88498.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 283

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + ++++ G FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A++            + ++G +YG   R++P  DG
Sbjct: 61  LLGYIRGYDNAADFRKLGTKSWDANANQNLAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++  +     L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A + G + G+  H + + H+Y + FE   D+QL R P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++ INP I  L         +DF + SYE H AI    SV
Sbjct: 240 LASPKLWINPAIKSLEDLETWVTLDDFKVESYEYHPAIQYPFSV 283


>gi|90407304|ref|ZP_01215490.1| putative thymidylate synthetase (thyA) [Psychromonas sp. CNPT3]
 gi|90311587|gb|EAS39686.1| putative thymidylate synthetase (thyA) [Psychromonas sp. CNPT3]
          Length = 283

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G      RT     +     + +D+    FP++TT+K  ++S + E
Sbjct: 1   MKQYLDLCKRIVEQGHWIENARTAKRCLTVINADLEYDVGNNKFPMITTRKSFYRSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+          + GE  +G +YG+Q RSW ++DG
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANLNKAWLNNPVRKGEDDMGRVYGIQARSWKNHDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  +V +L+     R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 SHLDQLKKVVDNLKQGIDDRAEIITFYNPGEFDLGCLRPCMHTHTFSLIGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G   H + + H+Y +      D+QL+R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTFLALMAQITGKKAGMAYHKIVNAHIYEDQLALMRDVQLTRQPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P++IINP I  L         +DF++  Y+ H  I    SV
Sbjct: 241 ASPKLIINPKIQSLEDLETWVSMDDFSIEDYQHHDPIKYPFSV 283


>gi|167856338|ref|ZP_02479067.1| thymidylate synthase [Haemophilus parasuis 29755]
 gi|167852534|gb|EDS23819.1| thymidylate synthase [Haemophilus parasuis 29755]
          Length = 283

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G     +RTG    +     + +D++KG FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLTYDVAKGAFPLVTTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P   G
Sbjct: 61  LLGYIRGYDNAADFRQLGTKSWDANANENAAWLANPHRKGEDDMGLVYGAVGRNFPKVGG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++        L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A + G Q G+  H + + H+Y +  E   D+QL R+P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGLQAGQAFHKIVNAHIYEDQLELMRDVQLKRTP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P + INP+I  L          DF +  YE H +I    SV
Sbjct: 240 FKAPTLKINPDIKSLEDLETWVTLADFEVEGYEYHPSIQYPFSV 283


>gi|212636535|ref|YP_002313060.1| thymidylate synthase [Shewanella piezotolerans WP3]
 gi|226713172|sp|B8CQK7|TYSY_SHEPW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|212558019|gb|ACJ30473.1| Thymidylate synthetase (thyA), putative [Shewanella piezotolerans
           WP3]
          Length = 283

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + +I  G+     RTG    +     + + + K  FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLELCQRIIDEGTWVENSRTGKRCLTVINADLVYHVDKNEFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L ++RG  N +     G   WD  A+ +             ++G +YGVQ R W   DG
Sbjct: 61  MLGYIRGYDNAADFRNIGAKTWDANANDNQAWLNNPHRKGADDMGRVYGVQGRGWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GSIDQLRKIVDNLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +  E    +QL RSP 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGHKAGTAYHKIVNAHIYEDQLELMQSVQLKRSPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP+I  L         +DF +  YE H  I    SV
Sbjct: 241 PSPQLSINPDIKSLEDLETWVTMDDFEVTGYEHHEGIRYPFSV 283


>gi|52424460|ref|YP_087597.1| thymidylate synthase [Mannheimia succiniciproducens MBEL55E]
 gi|62901273|sp|Q65VJ8|TYSY_MANSM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|52306512|gb|AAU37012.1| ThyA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 283

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G      RTG    +     + +D++   FP++TT+K +WK+ + E
Sbjct: 1   MRQYLDLCQRIVNEGCWIENKRTGKRCLTVINADLTYDVANNRFPIITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGAKTWDANANENQVWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++  N    D   L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVNNLSRGIDDRGEILTFLNPGEFDLGCLRPCMYNHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 240 FPSPKLEINPDIKTLEDLETWVTMDDFNVVGYQCHEPIKYPFSV 283


>gi|303232254|ref|ZP_07318953.1| thymidylate synthase [Atopobium vaginae PB189-T1-4]
 gi|302481664|gb|EFL44725.1| thymidylate synthase [Atopobium vaginae PB189-T1-4]
          Length = 282

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 115/241 (47%), Gaps = 8/241 (3%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D T   T   FG   R+DL + FP LT ++   KS V E+LW  +  SN   +H     
Sbjct: 32  EDGTPAYTIKQFGVCNRYDLRQEFPALTLRRTAIKSAVDEILWIYQKKSN--NIHDLKSH 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWD WAD+ G +G  YG Q      Y    +DQ+  ++  L  +PYSRR I S +  + +
Sbjct: 90  IWDSWADETGSIGKAYGYQIAQVSHYPEGDMDQMDRVLFDLTHNPYSRRIITSMYTFSDL 149

Query: 139 DKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            +M L PC     + V          L+  L QRS D+     +N+  Y++L MM+A   
Sbjct: 150 SEMHLYPCAYNVIYNVTKTPNEAKPTLNMLLVQRSQDILAANNWNVCQYAVLLMMVAQAT 209

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
               GE +H + D H+Y+ H       +SR     PQ+ +NP I +   F  +D  + +Y
Sbjct: 210 NMIPGELVHMIADAHIYDRHIPVVKELISRKEYPAPQVRLNPAITNFYDFTPDDVIVENY 269

Query: 253 E 253
           E
Sbjct: 270 E 270


>gi|15601944|ref|NP_245016.1| thymidylate synthase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431942|sp|P57808|TYSY_PASMU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|12720288|gb|AAK02163.1| ThyA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 283

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M  YL+L + ++  G      RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKHYLELCQRIVDEGVWVENARTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENSAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +LR     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVNNLRNGIDDRGEIMTFFNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  +   ++QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKAGKAYHKIINAHIYEDQLDLMKNVQLKRDP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             LPQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 240 FPLPQLHINPEIKTLEDLETWVTMDDFKVTGYQCHDAIKYPFSV 283


>gi|296417089|ref|XP_002838196.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634113|emb|CAZ82387.1| unnamed protein product [Tuber melanosporum]
          Length = 293

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 135/285 (47%), Gaps = 29/285 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG--FPLLTTKKVHWKSVVHEL 59
           + YLDL+R+++  G  R D+   GT S F         +    P+L+TK V  K +++EL
Sbjct: 16  YHYLDLVRNMLTNGEQRPDKRRAGTTSLFATPTAPPQPEKPHTPVLSTKHVFQKVILYEL 75

Query: 60  LWFLRGDSNVSYLHRHGVSIWD--------------EWADKDGELGPIYGVQWRSWPDYD 105
            WF+ G +N   +   G  I +              E A +D  LGP+YG Q R      
Sbjct: 76  FWFISGSTNNVPVSAVGAKILEGDGSRAYLDCIGLTERAQRD--LGPVYGFQLRHI---G 130

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKL 159
              +D         +       H+    + +  D +A     C  QFYV        G L
Sbjct: 131 AKYVDCHMGYPVQCKHHLRPHHHVRMESDRSGEDGVAAVSHVC--QFYVLYKDGKGEGAL 188

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
            C LYQRS D+ LG+PFNIAS  LLT+M+A V G + GEF  T+GD + Y +  +   +Q
Sbjct: 189 CCVLYQRSCDMGLGVPFNIASSRLLTIMIAHVCGLEPGEFRDTMGDENGYADREDTLKVQ 248

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R+PR LP   IN  + D+  F+ EDF    ++PH  I    +V
Sbjct: 249 LERAPRELPTAKINRQVDDIDDFKSEDFKRVGHDPHPGIKMNPAV 293


>gi|223041713|ref|ZP_03611907.1| thymidylate synthase [Actinobacillus minor 202]
 gi|223017457|gb|EEF15874.1| thymidylate synthase [Actinobacillus minor 202]
          Length = 283

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + +D+ KG FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVANERTGKRCLTVINADLTYDVEKGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL ++RG S+ +     G   WD  A+++             ++G +YG   R++P  +G
Sbjct: 61  LLGYIRGYSSAADFRALGTKSWDANANENSAWLANPHRKGEDDMGLVYGAIGRNYPKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L     +R  I + ++    +   L PC     F + +GKL     QR
Sbjct: 121 GSVDLLRQIVDDLSRGIDNRGEIYTFYHPGAFELGCLRPCLHSHHFSLLDGKLYLNSTQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHEAGQAFHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            + P++IINP I  L         +DF +  YE H +I    SV
Sbjct: 240 LSAPKLIINPEIKSLEDLETWVTLDDFRVEGYEYHPSIQYPFSV 283


>gi|71279358|ref|YP_270289.1| thymidylate synthase [Colwellia psychrerythraea 34H]
 gi|123774868|sp|Q47Y31|TYSY_COLP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|71145098|gb|AAZ25571.1| thymidylate synthase [Colwellia psychrerythraea 34H]
          Length = 283

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M  YLDL + +I  G+    +RTG    +     + +++    FPL+TT+K  +KS + E
Sbjct: 1   MRAYLDLCQRIIDQGTWVENERTGKRCLTVINADLEYNVGNNEFPLITTRKSFFKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
            + ++RG  + +   + G   WD  A+          + GE  +G +YG+Q R+W   DG
Sbjct: 61  FIGYIRGYDSAADFRKLGTKTWDANANLNDAWLNNTHRKGEDDMGRVYGIQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L+     R  I++ +N        L PC     F +    L    +QR
Sbjct: 121 GTIDQLKKIVDNLKDGIDDRAEIMTFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +   ++A + G + G   H + + H+Y +      ++QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFVFLALMAQITGKKAGMAYHKIVNAHIYEDQLPLMKEVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
            LP++IINP I  L         +DF +  YE H AI
Sbjct: 241 ALPKLIINPEIKSLEDLETWVTMDDFKVEGYECHEAI 277


>gi|291517888|emb|CBK73109.1| thymidylate synthase [Butyrivibrio fibrisolvens 16/4]
          Length = 283

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 131/269 (48%), Gaps = 20/269 (7%)

Query: 7   LLRHVIKFGSDRRDR--------TGVG--TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           + R +++ G+D +D         TG    T   FG   ++DL + FP LT +K   KS +
Sbjct: 11  MCRDILENGTDTKDEIVRPTWQDTGEKAYTIKQFGVVNKYDLREEFPALTLRKTALKSCM 70

Query: 57  HELLW-FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
            E+LW + R  +N+  L  H   +WDEWAD++G +G  YG       ++ G +IDQ+  +
Sbjct: 71  DEVLWIYQRKSNNIHDLKPH---VWDEWADENGSIGTAYGYVVGEKFEFKGEMIDQMDYV 127

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGD 169
           ++ L+  PYSRR + + +    +    L PC     + V   K      L+  L QRS D
Sbjct: 128 LKQLKETPYSRRIMTNLYQFHDLATGHLDPCCYSATYNVTKDKNSDKLVLNMVLNQRSQD 187

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           +     +N+  Y++L MM+A V     G+ IH + D H+Y+ H +     L R     P+
Sbjct: 188 ILAANNWNVCQYAILLMMVAQVNDMIPGQLIHVIADAHIYDRHVDAIKELLERPELPAPK 247

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           + +NP + +   F  +D  +  YE    I
Sbjct: 248 VRLNPEVKNFYDFTTDDLIVEGYEAGEQI 276


>gi|219871597|ref|YP_002475972.1| thymidylate synthase [Haemophilus parasuis SH0165]
 gi|254790239|sp|B8F6S2|TYSY_HAEPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219691801|gb|ACL33024.1| thymidylate synthase [Haemophilus parasuis SH0165]
          Length = 283

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G     +RTG    +     + +D++KG FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLTYDVAKGEFPLVTTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P   G
Sbjct: 61  LLGYIRGYDNAADFRQLGTKSWDANANENAAWLTNPHRKGEDDMGLVYGAVGRNFPKVGG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++        L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A + G Q G+  H + + H+Y +  E   D+QL R+P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHQAGQAFHKIVNAHIYEDQLELMRDVQLKRTP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P + INP+I  L          DF +  YE H +I    SV
Sbjct: 240 FKAPTLKINPDIKSLEDLETWVTLADFEVEGYEYHPSIQYPFSV 283


>gi|240949099|ref|ZP_04753447.1| thymidylate synthase [Actinobacillus minor NM305]
 gi|240296494|gb|EER47126.1| thymidylate synthase [Actinobacillus minor NM305]
          Length = 283

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + +D+ KG FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVSNERTGKRCLTVINADLTYDVEKGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL ++RG S+ +     G   WD  A+++             ++G +YG   R++P  +G
Sbjct: 61  LLGYIRGYSSAADFRTLGTKSWDANANENSAWLANPHRKGEDDMGLVYGAIGRNFPKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L     +R  I + ++    +   L PC     F + +GKL     QR
Sbjct: 121 GSVDLLRQIVDDLSRGIDNRGEIYTFYHPGAFELGCLRPCLHSHHFSLLDGKLYLNSTQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHEAGQAFHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            + P++IINP I  L         +DF +  YE H +I    SV
Sbjct: 240 LSAPKLIINPKIKSLEDLETWVTLDDFRVEGYEYHPSIQYPFSV 283


>gi|307249319|ref|ZP_07531313.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306858613|gb|EFM90675.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 283

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + ++++ G FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVAAGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P  DG
Sbjct: 61  LLGYIRGYDNAADFRKLGTKSWDANANQNSAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++  +     L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A + G + G+  H + + H+Y + FE   D+QL R P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++ INP I  L         +DF +  YE H AI    SV
Sbjct: 240 LASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 283


>gi|260771141|ref|ZP_05880068.1| thymidylate synthase [Vibrio furnissii CIP 102972]
 gi|260613738|gb|EEX38930.1| thymidylate synthase [Vibrio furnissii CIP 102972]
 gi|315179253|gb|ADT86167.1| thymidylate synthase [Vibrio furnissii NCTC 11218]
          Length = 283

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDEGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRALGTKTWDANANLNDAWLNNPHRQGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHVDQLKKIVDDLTRGVDDRGEILNFYNPGEFHLGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLALMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INPNI  L         +DF +  YE H  I    SV
Sbjct: 241 AAPQFHINPNIKSLHDLETWVTLDDFDVTGYEFHEPIQYPFSV 283


>gi|157374274|ref|YP_001472874.1| thymidylate synthase [Shewanella sediminis HAW-EB3]
 gi|189036946|sp|A8FSC3|TYSY_SHESH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157316648|gb|ABV35746.1| Thymidylate synthase [Shewanella sediminis HAW-EB3]
          Length = 283

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L   +I  G+    +RTG    +     + +++    FPL+TT+K  WKS + E
Sbjct: 1   MKQYLELCNRIIDEGTWIENERTGKRCLTVINADLTYNVGNNEFPLITTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  MLGYIRGYDNAADFRALGAKTWDANANENQVWLNNPHRKGVDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L+A    R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GTVDQLKKIVDNLKAGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVYTLLALIAQITGKKPGMAYHKIVNAHIYEDQLALMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
               + INP+I  L         +DF +  Y+ H AI    SV
Sbjct: 241 EPASLSINPDIKSLEDLETWVTMDDFEVSGYQHHEAIKYPFSV 283


>gi|260589792|ref|ZP_05855705.1| thymidylate synthase [Blautia hansenii DSM 20583]
 gi|331083219|ref|ZP_08332335.1| thymidylate synthase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260540032|gb|EEX20601.1| thymidylate synthase [Blautia hansenii DSM 20583]
 gi|330404608|gb|EGG84148.1| thymidylate synthase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 283

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 12/241 (4%)

Query: 26  TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGVSIWDEWA 84
           T   FG   R+DL K FP LT +K   K+ + E+LW + R  +N+  L+ H   IWD WA
Sbjct: 40  TIKRFGVVNRYDLRKEFPALTLRKTALKTCMDEILWIYQRKSNNIHDLNGH---IWDAWA 96

Query: 85  DKDGELGPIYG-VQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           D+DG +G  YG V  R +  Y G   DQ+  +++ L+ +PYSRR + + +    +   AL
Sbjct: 97  DEDGSIGTCYGDVVGRKFL-YKGEETDQMDYVLKQLKENPYSRRIMTNLYQFEYLHSGAL 155

Query: 144 PPCHCLFQFYVDNGK------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
            PC     + V   K      L+  L QRS D+     +N+  Y++L MM+A V     G
Sbjct: 156 DPCCYSMTYNVTKEKDSEKLVLNGVLNQRSQDILAANNWNVCQYAILLMMVAQVNDMIPG 215

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E +H + D H+Y+ H       + R     P++ +NP + D   F  +D  + +Y+    
Sbjct: 216 ELVHVIADAHIYDRHVPVIQELIKRETFPAPKVRLNPEVKDFYQFTTDDLIVENYQAGPQ 275

Query: 258 I 258
           I
Sbjct: 276 I 276


>gi|28897298|ref|NP_796903.1| thymidylate synthase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363899|ref|ZP_05776647.1| thymidylate synthase [Vibrio parahaemolyticus K5030]
 gi|260876263|ref|ZP_05888618.1| thymidylate synthase [Vibrio parahaemolyticus AN-5034]
 gi|260897576|ref|ZP_05906072.1| thymidylate synthase [Vibrio parahaemolyticus Peru-466]
 gi|260901099|ref|ZP_05909494.1| thymidylate synthase [Vibrio parahaemolyticus AQ4037]
 gi|31077025|sp|Q87SA0|TYSY_VIBPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|28805507|dbj|BAC58787.1| thymidylate synthase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308084906|gb|EFO34601.1| thymidylate synthase [Vibrio parahaemolyticus Peru-466]
 gi|308092896|gb|EFO42591.1| thymidylate synthase [Vibrio parahaemolyticus AN-5034]
 gi|308107467|gb|EFO45007.1| thymidylate synthase [Vibrio parahaemolyticus AQ4037]
 gi|308112969|gb|EFO50509.1| thymidylate synthase [Vibrio parahaemolyticus K5030]
 gi|328472062|gb|EGF42939.1| thymidylate synthase [Vibrio parahaemolyticus 10329]
          Length = 283

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F + +  L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYPFSV 283


>gi|152997743|ref|YP_001342578.1| thymidylate synthase [Marinomonas sp. MWYL1]
 gi|189036938|sp|A6W1R4|TYSY_MARMS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|150838667|gb|ABR72643.1| Thymidylate synthase [Marinomonas sp. MWYL1]
          Length = 283

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + +D+SKG FPL+TT+K +WKS + E
Sbjct: 1   MKQYLDLCNRIVNEGEWVSNERTGKRCLTVINADLTYDVSKGEFPLVTTRKSYWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106
           ++ +LRG  N +     G   WD  A++            + ++G  YG   R++P  DG
Sbjct: 61  IIGYLRGYDNAADFRALGTKTWDANANENEVWLNSPYRKGEDDMGLCYGAIGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID +  I+  L     +R  I++ ++        L PC     F +    L     QR
Sbjct: 121 GHIDLLKQIIDDLSRGVDNRGEILTFYHPGAFHMACLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVLLAIVAQITGKKPGKAFHKIVNAHIYEDQLELMRDVQLKREPY 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            LP + INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPTLKINPEIKSLKDIETWVTMDDFEIEGYQFHEPIAYPFSV 283


>gi|294139696|ref|YP_003555674.1| thymidylate synthase [Shewanella violacea DSS12]
 gi|293326165|dbj|BAJ00896.1| thymidylate synthase [Shewanella violacea DSS12]
          Length = 283

 Score =  132 bits (332), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L   +I  G+    +RTG    +     + +++    FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLELCNRIIDEGTWIENERTGKRCLTVINADLVYNVENNEFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L ++RG  N +   + G   WD  A+ +             ++G +YGVQ R+W   DG
Sbjct: 61  MLGYIRGFDNAADFRKLGAKTWDANANDNLAWLNNPHRKGQDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L+     R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GTIDQLKKIVDNLKKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGKKPGQAYHKIVNAHIYEDQLDLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
               + INP+I  L         +DF + +Y+ H AI    SV
Sbjct: 241 GPASLSINPDIKSLEDLETWVTMDDFEVSNYQHHDAIKYPFSV 283


>gi|261250328|ref|ZP_05942904.1| thymidylate synthase [Vibrio orientalis CIP 102891]
 gi|260939444|gb|EEX95430.1| thymidylate synthase [Vibrio orientalis CIP 102891]
          Length = 283

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNADDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
                 INP I  L         +DF +  YE H AI    SV
Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHEAIKYPFSV 283


>gi|331017947|gb|EGH98003.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 216

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 109/212 (51%), Gaps = 51/212 (24%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYD--- 105
            FLRG SN +     G  +WD+ A+++ +            LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -GNV------------------------------IDQISSIVQSLRADPYSRRHIVSAWN 134
            GNV                              IDQI   + ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
            A +D+MALP CH     + D+   + + YQ+
Sbjct: 181 CAQLDEMALPACH-----FADSATPTVKKYQQ 207


>gi|86147416|ref|ZP_01065729.1| thymidylate synthase [Vibrio sp. MED222]
 gi|218708561|ref|YP_002416182.1| thymidylate synthase [Vibrio splendidus LGP32]
 gi|254790257|sp|B7VJ78|TYSY_VIBSL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|85834844|gb|EAQ52989.1| thymidylate synthase [Vibrio sp. MED222]
 gi|218321580|emb|CAV17532.1| Thymidylate synthase [Vibrio splendidus LGP32]
          Length = 283

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVNDGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  ++          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H L + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEAIKYPFSV 283


>gi|91227678|ref|ZP_01261955.1| thymidylate synthase [Vibrio alginolyticus 12G01]
 gi|262395196|ref|YP_003287050.1| thymidylate synthase [Vibrio sp. Ex25]
 gi|269966616|ref|ZP_06180697.1| thymidylate synthase [Vibrio alginolyticus 40B]
 gi|91188457|gb|EAS74751.1| thymidylate synthase [Vibrio alginolyticus 12G01]
 gi|262338790|gb|ACY52585.1| thymidylate synthase [Vibrio sp. Ex25]
 gi|269828801|gb|EEZ83054.1| thymidylate synthase [Vibrio alginolyticus 40B]
          Length = 283

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV  L      R  I++ +N        L PC     F + +  L     QR
Sbjct: 121 GHVDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 KAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYPFSV 283


>gi|32709399|gb|AAP86960.1| tymidylate synthase [Haemophilus parasuis]
          Length = 283

 Score =  131 bits (330), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G     +RTG    +     + +D++KG FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLIYDVAKGEFPLVTTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P   G
Sbjct: 61  LLGYIRGYDNAADFRQLGTKSWDANANENAAWLANPHRKGEDDMGLVYGAVGRNFPKVGG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++        L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHLGCLRPCLHSHHFSLLDGTLYLNSIQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A + G Q G+  H + + H+Y +  E   D+QL R+P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHQAGQAFHKIVNAHIYEDQLELMRDVQLKRTP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P + INP+I  L          DF +  YE H +I    SV
Sbjct: 240 FKAPTLKINPDIKSLEDLEIWVTLADFEVEGYEYHPSIQYPFSV 283


>gi|302335591|ref|YP_003800798.1| thymidylate synthase [Olsenella uli DSM 7084]
 gi|301319431|gb|ADK67918.1| thymidylate synthase [Olsenella uli DSM 7084]
          Length = 282

 Score =  131 bits (330), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 8/240 (3%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            D T   T   FG   R+DL + FP LT ++   +S + E+LW  +  SN   +H     
Sbjct: 32  EDGTPAYTIKQFGVCNRYDLREEFPALTLRRTALRSAMDEVLWIYQKKSN--NIHDLSSH 89

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           IWDEWAD+ G +G  YG Q      Y    +DQ+  ++  LR++PYSRR + S +  A +
Sbjct: 90  IWDEWADESGSIGKAYGYQIAQKSHYPEGDMDQMDRVLFDLRSNPYSRRIMTSTYTFADL 149

Query: 139 DKMALPPC--HCLFQFYVDNGK----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            +M L PC  + ++      G+    L+  L QRS D+     +N+  Y++L MM+A   
Sbjct: 150 SEMNLYPCAFNVIYNVTQTPGEERPSLNMLLVQRSQDILAANNWNVCQYAILLMMVAQTN 209

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
               GE +H + D H+Y+ H +     ++R     P++ + P++ D   F  +D  +  Y
Sbjct: 210 DMVAGELVHMISDAHIYDRHVDIVRELIARPTYPAPKVSLRPDVHDFYDFTTDDLIVCDY 269


>gi|119944280|ref|YP_941960.1| thymidylate synthase [Psychromonas ingrahamii 37]
 gi|166231727|sp|A1SS96|TYSY_PSYIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119862884|gb|ABM02361.1| thymidylate synthase [Psychromonas ingrahamii 37]
          Length = 283

 Score =  131 bits (330), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G      RTG    +     + +D+    FP++TT+K  +KS + E
Sbjct: 1   MKQYLGLCQRIVDKGIWIENQRTGKRCLTVINADLEYDVGNNQFPMITTRKSFYKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           L+ +LRG  N +   + G   WD  ++          + GE  +G +YG+Q RSW   DG
Sbjct: 61  LIGYLRGYDNAADFRKLGTKTWDANSNLNNAWLNNPYRKGEDDMGRVYGIQGRSWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  +V  L      R  IV+ +N    +   L PC     F +    L    YQR
Sbjct: 121 GFIDQLKKVVDDLSNGIDDRGEIVTFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFALLALMAQITGKKAGMAYHKIVNAHIYEDQLALMRDVQLPRLPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 ASPQLKINPKIKSLQDLETWVTMDDFEVEGYQCHDAIKYPFSV 283


>gi|78499355|gb|ABB45712.1| thymidylate synthetase [Ovis aries]
          Length = 147

 Score =  131 bits (330), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 20/147 (13%)

Query: 37  DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD--------- 87
           +L   FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D         
Sbjct: 1   NLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSN 60

Query: 88  ---GELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA 136
              G+LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN  
Sbjct: 61  RAEGDLGPVYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPK 120

Query: 137 LIDKMALPPCHCLFQFYVDNGKLSCQL 163
            +  MALPPCH L QFYV NG+ SCQL
Sbjct: 121 DLPLMALPPCHALCQFYVVNGEPSCQL 147


>gi|37678863|ref|NP_933472.1| thymidylate synthase [Vibrio vulnificus YJ016]
 gi|50401487|sp|Q7MNN6|TYSY_VIBVY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|37197604|dbj|BAC93443.1| thymidylate synthase [Vibrio vulnificus YJ016]
          Length = 283

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             D ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGDDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|153803571|ref|ZP_01958157.1| thymidylate synthase [Vibrio cholerae MZO-3]
 gi|124120895|gb|EAY39638.1| thymidylate synthase [Vibrio cholerae MZO-3]
          Length = 283

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INPN+  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPNVKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|114564106|ref|YP_751620.1| thymidylate synthase [Shewanella frigidimarina NCIMB 400]
 gi|122299026|sp|Q07YY3|TYSY_SHEFN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|114335399|gb|ABI72781.1| thymidylate synthase [Shewanella frigidimarina NCIMB 400]
          Length = 283

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 129/277 (46%), Gaps = 19/277 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G      RT     +     + +D+    FPL+TT+K  WKS + E
Sbjct: 1   MKQYLDLCKRIVDEGEWVNNARTNKKCLTVINADLVYDVGNNQFPLVTTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDE-------WADKDGELGP-----IYGVQWRSWPDYDG 106
           +L +LRG  N +     G   WD        W D     GP     IYG   R++P  DG
Sbjct: 61  ILGYLRGYQNAADFRALGTKTWDANANENQAWLDNPNRKGPDDMGLIYGALGRAFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L     +R  I++ ++    D   L PC     F +    L     QR
Sbjct: 121 GHVDLLQQIVDDLSNGIDNRGEILTFYHPGAFDLGCLRPCMYEHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +L  ++A + G + G+  H + + H+Y +  E   D+QL+R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVLLALMAQITGHKPGKAYHKIVNAHIYEDQLEPMRDVQLAREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
             P++IINP I  L         +DF++  Y+ H AI
Sbjct: 241 ASPKLIINPKIKTLKDIETWVTLDDFSVEDYQHHDAI 277


>gi|126207603|ref|YP_001052828.1| thymidylate synthase [Actinobacillus pleuropneumoniae L20]
 gi|303249819|ref|ZP_07336023.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307251642|ref|ZP_07533547.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307256140|ref|ZP_07537927.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|126096395|gb|ABN73223.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|302651386|gb|EFL81538.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860839|gb|EFM92847.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306865321|gb|EFM97217.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 283

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + ++++ G FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++          GE  +G +YG   R++P  DG
Sbjct: 61  LLGYIRGYDNAADFRKLGTKSWDANANQNLAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++  +     L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A + G + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYEDQLELMRDVQLKRKP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++ INP I  L         +DF +  YE H AI    SV
Sbjct: 240 LASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 283


>gi|156973290|ref|YP_001444197.1| thymidylate synthase [Vibrio harveyi ATCC BAA-1116]
 gi|166231743|sp|A7MXJ9|TYSY_VIBHB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|156524884|gb|ABU69970.1| hypothetical protein VIBHAR_00971 [Vibrio harveyi ATCC BAA-1116]
          Length = 283

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ RSW   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRSWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L  D   R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRDVDDRGEILNFYNPGEFHIGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
                 INP I  L         +DF +  YE H  I    SV
Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|89093745|ref|ZP_01166691.1| thymidylate synthase [Oceanospirillum sp. MED92]
 gi|89081875|gb|EAR61101.1| thymidylate synthase [Oceanospirillum sp. MED92]
          Length = 283

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 132/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G     +RTG    +     + +D++KG FP++TT+K  +KS + E
Sbjct: 1   MRQYLDLCQRIIDEGVWVENERTGKRCLTVINADLTYDVAKGEFPMVTTRKTFYKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           +L +LRG  N +   + G   WD  A+ +             + G IYG   R++P  DG
Sbjct: 61  MLGYLRGYDNAADFRKIGTKTWDANANDNAAWLNNPYRKGEDDCGFIYGKVGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID +  IV  L      R  I + ++        L PC     F +    L     QR
Sbjct: 121 GSIDLLRKIVDDLSQGIDDRGEIYTFYHPGAFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G+  H + + H+Y +  E   D+QL+R P 
Sbjct: 181 SCDVPLGLTFNMIQVYFLLAIMAQITGKKPGKAYHRIVNAHIYEDQVELMRDVQLTREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            LP   INP+I  L         +DF +  YE H AI    SV
Sbjct: 241 PLPTFKINPDIKTLEDLETWVTVDDFEVEGYEHHEAIQYPFSV 283


>gi|289423078|ref|ZP_06424893.1| thymidylate synthase [Peptostreptococcus anaerobius 653-L]
 gi|289156409|gb|EFD05059.1| thymidylate synthase [Peptostreptococcus anaerobius 653-L]
          Length = 277

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 15/227 (6%)

Query: 35  RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELG 91
           ++DLSKG  P++T ++  WKS + E+LW  +  +N   +   ++G++ WDEW   D  +G
Sbjct: 48  KYDLSKGELPIVTLRQTAWKSGIKEILWIYQDQTNDLDILKDKYGITWWDEWDIGDRTIG 107

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA-LIDKMALPPCHCLF 150
             YG   + +        D I+ ++  L+  PY RRHI++ +  A L +   L PC    
Sbjct: 108 QRYGATVKRY--------DLINKLLDGLKNQPYGRRHIINLYQEADLAETKGLHPCAMET 159

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           Q+   +G L   L QRS D+ +    N   Y  L MM+A  +G + G F H + + H+Y+
Sbjct: 160 QWTARDGYLDMTLIQRSSDLLVANAINKIQYVALQMMVARHVGLEPGVFCHYVNNAHIYD 219

Query: 211 NHFEQADLQLSRSPRTLPQ---MIINPNIVDLLSFRYEDFTLRSYEP 254
            H +QA   +SR P+   +   +++NP   +   F  +DFT+ +Y P
Sbjct: 220 RHIDQAKEIMSRKPQENDESVRLVLNPEKTNFYDFTIDDFTMENYNP 266


>gi|84393972|ref|ZP_00992712.1| thymidylate synthase [Vibrio splendidus 12B01]
 gi|84375416|gb|EAP92323.1| thymidylate synthase [Vibrio splendidus 12B01]
          Length = 283

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVNDGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  ++          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H L + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEVIKYPFSV 283


>gi|27363979|ref|NP_759507.1| thymidylate synthase [Vibrio vulnificus CMCP6]
 gi|29611889|sp|Q8DER9|TYSY_VIBVU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|27360096|gb|AAO09034.1| thymidylate synthase [Vibrio vulnificus CMCP6]
          Length = 283

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|15640694|ref|NP_230324.1| thymidylate synthase [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121591333|ref|ZP_01678622.1| thymidylate synthase [Vibrio cholerae 2740-80]
 gi|153820133|ref|ZP_01972800.1| thymidylate synthase [Vibrio cholerae NCTC 8457]
 gi|153823743|ref|ZP_01976410.1| thymidylate synthase [Vibrio cholerae B33]
 gi|227080856|ref|YP_002809407.1| thymidylate synthase [Vibrio cholerae M66-2]
 gi|229505705|ref|ZP_04395215.1| thymidylate synthase [Vibrio cholerae BX 330286]
 gi|229508721|ref|ZP_04398214.1| thymidylate synthase [Vibrio cholerae B33]
 gi|229519529|ref|ZP_04408972.1| thymidylate synthase [Vibrio cholerae RC9]
 gi|229608724|ref|YP_002879372.1| thymidylate synthase [Vibrio cholerae MJ-1236]
 gi|254851007|ref|ZP_05240357.1| thymidylate synthase [Vibrio cholerae MO10]
 gi|255743866|ref|ZP_05417822.1| thymidylate synthase [Vibrio cholera CIRS 101]
 gi|262156085|ref|ZP_06029204.1| thymidylate synthase [Vibrio cholerae INDRE 91/1]
 gi|297580799|ref|ZP_06942725.1| thymidylate synthase [Vibrio cholerae RC385]
 gi|298500789|ref|ZP_07010592.1| thymidylate synthase [Vibrio cholerae MAK 757]
 gi|6686061|sp|O66108|TYSY_VIBCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790256|sp|C3LST0|TYSY_VIBCM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|3114981|emb|CAA76645.1| thymidilate synthase [Vibrio cholerae]
 gi|9655113|gb|AAF93840.1| thymidylate synthase [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121546814|gb|EAX56979.1| thymidylate synthase [Vibrio cholerae 2740-80]
 gi|126509325|gb|EAZ71919.1| thymidylate synthase [Vibrio cholerae NCTC 8457]
 gi|126518737|gb|EAZ75960.1| thymidylate synthase [Vibrio cholerae B33]
 gi|227008744|gb|ACP04956.1| thymidylate synthase [Vibrio cholerae M66-2]
 gi|229344218|gb|EEO09193.1| thymidylate synthase [Vibrio cholerae RC9]
 gi|229354245|gb|EEO19175.1| thymidylate synthase [Vibrio cholerae B33]
 gi|229357928|gb|EEO22845.1| thymidylate synthase [Vibrio cholerae BX 330286]
 gi|229371379|gb|ACQ61802.1| thymidylate synthase [Vibrio cholerae MJ-1236]
 gi|254846712|gb|EET25126.1| thymidylate synthase [Vibrio cholerae MO10]
 gi|255738497|gb|EET93886.1| thymidylate synthase [Vibrio cholera CIRS 101]
 gi|262030121|gb|EEY48766.1| thymidylate synthase [Vibrio cholerae INDRE 91/1]
 gi|297535215|gb|EFH74050.1| thymidylate synthase [Vibrio cholerae RC385]
 gi|297540570|gb|EFH76628.1| thymidylate synthase [Vibrio cholerae MAK 757]
 gi|327483475|gb|AEA77882.1| Thymidylate synthase [Vibrio cholerae LMA3894-4]
          Length = 283

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|254226521|ref|ZP_04920104.1| thymidylate synthase [Vibrio cholerae V51]
 gi|262190229|ref|ZP_06048504.1| thymidylate synthase [Vibrio cholerae CT 5369-93]
 gi|125620925|gb|EAZ49276.1| thymidylate synthase [Vibrio cholerae V51]
 gi|262033898|gb|EEY52363.1| thymidylate synthase [Vibrio cholerae CT 5369-93]
          Length = 283

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|121730081|ref|ZP_01682486.1| thymidylate synthase [Vibrio cholerae V52]
 gi|147673512|ref|YP_001216170.1| thymidylate synthase [Vibrio cholerae O395]
 gi|153216952|ref|ZP_01950716.1| thymidylate synthase [Vibrio cholerae 1587]
 gi|153826528|ref|ZP_01979195.1| thymidylate synthase [Vibrio cholerae MZO-2]
 gi|262169974|ref|ZP_06037664.1| thymidylate synthase [Vibrio cholerae RC27]
 gi|172047693|sp|A5F8Y6|TYSY_VIBC3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|3201565|emb|CAA07073.1| thymidylate synthetase [Vibrio cholerae]
 gi|121628168|gb|EAX60695.1| thymidylate synthase [Vibrio cholerae V52]
 gi|124114017|gb|EAY32837.1| thymidylate synthase [Vibrio cholerae 1587]
 gi|146315395|gb|ABQ19934.1| thymidylate synthase [Vibrio cholerae O395]
 gi|149739708|gb|EDM53915.1| thymidylate synthase [Vibrio cholerae MZO-2]
 gi|227012500|gb|ACP08710.1| thymidylate synthase [Vibrio cholerae O395]
 gi|262021708|gb|EEY40419.1| thymidylate synthase [Vibrio cholerae RC27]
          Length = 283

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|153829174|ref|ZP_01981841.1| thymidylate synthase [Vibrio cholerae 623-39]
 gi|229530480|ref|ZP_04419868.1| thymidylate synthase [Vibrio cholerae 12129(1)]
 gi|148875363|gb|EDL73498.1| thymidylate synthase [Vibrio cholerae 623-39]
 gi|229332253|gb|EEN97741.1| thymidylate synthase [Vibrio cholerae 12129(1)]
          Length = 283

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQVWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|115524187|ref|YP_781098.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
 gi|115518134|gb|ABJ06118.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
          Length = 99

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/92 (61%), Positives = 72/92 (78%)

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G PFNIASY+LLTMM+A V G + G+F+HTLGD HLY+NH EQA LQL+R+PR LP M I
Sbjct: 8   GKPFNIASYALLTMMVAQVTGLKPGDFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTI 67

Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NP + D+  F+YEDF L+ Y+PH  I A+V+V
Sbjct: 68  NPEVKDIFGFKYEDFALQGYDPHPHIKAEVAV 99


>gi|109900136|ref|YP_663391.1| thymidylate synthase [Pseudoalteromonas atlantica T6c]
 gi|123170603|sp|Q15P51|TYSY_PSEA6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|109702417|gb|ABG42337.1| thymidylate synthase [Pseudoalteromonas atlantica T6c]
          Length = 283

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +++  G FPL+TT+K  +KS + E
Sbjct: 1   MKQYLDLCQRIVDDGKWVNNERTGKKCLTVINADLTYNVGNGEFPLVTTRKSFYKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106
           ++ ++RG  N +   + G S WD  A++            + + G IYG   R++P  DG
Sbjct: 61  MIGYIRGYDNAADFRKIGTSTWDANANQNQAWLDNPHRKGEDDCGLIYGKIGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID ++ I+  L+     R  I + ++        L PC     F + +  L     QR
Sbjct: 121 GSIDLLAKIIYDLKNGIDDRGEIFTFYHPGAFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGKKAGMAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            +P++IINP+I  L         +DF++  Y  H AI    SV
Sbjct: 241 GMPKLIINPDIKSLEDLETWVTMDDFSIEGYAHHPAIKYPFSV 283


>gi|229512935|ref|ZP_04402402.1| thymidylate synthase [Vibrio cholerae TMA 21]
 gi|229350184|gb|EEO15137.1| thymidylate synthase [Vibrio cholerae TMA 21]
          Length = 283

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|148978525|ref|ZP_01814977.1| thymidylate synthase [Vibrionales bacterium SWAT-3]
 gi|145962314|gb|EDK27595.1| thymidylate synthase [Vibrionales bacterium SWAT-3]
          Length = 283

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDNGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  +     + G   WD  ++          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDSAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H L + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEAIKYPFSV 283


>gi|229520965|ref|ZP_04410387.1| thymidylate synthase [Vibrio cholerae TM 11079-80]
 gi|254291915|ref|ZP_04962697.1| thymidylate synthase [Vibrio cholerae AM-19226]
 gi|150422201|gb|EDN14166.1| thymidylate synthase [Vibrio cholerae AM-19226]
 gi|229342198|gb|EEO07194.1| thymidylate synthase [Vibrio cholerae TM 11079-80]
          Length = 283

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|229525326|ref|ZP_04414731.1| thymidylate synthase [Vibrio cholerae bv. albensis VL426]
 gi|229338907|gb|EEO03924.1| thymidylate synthase [Vibrio cholerae bv. albensis VL426]
          Length = 283

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|323497789|ref|ZP_08102803.1| thymidylate synthase [Vibrio sinaloensis DSM 21326]
 gi|323317136|gb|EGA70133.1| thymidylate synthase [Vibrio sinaloensis DSM 21326]
          Length = 283

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
                 INPNI  L         +DF +  Y  H  I    SV
Sbjct: 241 DAATFHINPNIKSLEDLETWVTLDDFWVEGYAHHDPIQYPFSV 283


>gi|261212215|ref|ZP_05926501.1| thymidylate synthase [Vibrio sp. RC341]
 gi|260838823|gb|EEX65474.1| thymidylate synthase [Vibrio sp. RC341]
          Length = 283

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GQIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLPLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP+I  L         +DF +  YE H AI    SV
Sbjct: 241 AAPQFHINPDIKTLHDLETWVTLDDFEVTGYEFHDAIQYPFSV 283


>gi|326632978|ref|YP_004306567.1| thymidylate synthase [Enterobacteria phage SPC35]
 gi|321272172|gb|ADW80064.1| thymidylate synthase [Enterobacteria phage SPC35]
          Length = 284

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 137/284 (48%), Gaps = 20/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QY+++ + ++  G      RTGV   +       F++  G FPL+TT+K   K  + E
Sbjct: 1   MDQYIEVGKRILSDGQWVTNPRTGVRCLTIVDADFTFNVGAGEFPLITTRKAFAKQAIME 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           ++ +LRG  + +     GV+ W+  A+++             ++G +YGVQ R W + DG
Sbjct: 61  MIGYLRGYDSAAQFRAIGVNTWNANANENSAWLDNPYRKGEDDMGRVYGVQGRQWTNSDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
            + DQ++ I  +L+     R  I++ WN     K  L PC    QF +    L    +QR
Sbjct: 121 LMFDQLAKIYHNLKKGIDDRGEILTFWNPGEFSKGCLRPCMHTHQFSILGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE--QADLQLSRSP 224
           S D  LG  FN+     L  ++A + G + G     + ++H+Y + +       Q  R P
Sbjct: 181 SNDFLLGQVFNMVQCYTLLALMAQITGLKPGIARQKIINLHIYEDQYNVLMEHKQFDRKP 240

Query: 225 RTLPQMIINPNI---VDLLSF-RYEDFTLRSYEPHAAILAKVSV 264
              P + INPNI    D+L++   +DFT+R YE H AI    +V
Sbjct: 241 FAPPTLEINPNIRTLEDVLTWVSKDDFTVRGYEHHPAIAYPFTV 284


>gi|237809696|ref|YP_002894136.1| thymidylate synthase [Tolumonas auensis DSM 9187]
 gi|259550815|sp|C4LD19|TYSY_TOLAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|237501957|gb|ACQ94550.1| thymidylate synthase [Tolumonas auensis DSM 9187]
          Length = 283

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 136/284 (47%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G      RT     +     + +D+ +  FP++TT+K  WK+ + E
Sbjct: 1   MKQYLDLCQRIIDEGVWIENQRTNKRCLTVINADLVYDVRNNQFPIITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+++             ++G +YGVQ R W  +DG
Sbjct: 61  LLGYIRGYDNAADFRALGTKSWDANANENEAWLKNPARKGLDDMGRVYGVQGRHWKTHDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++  N    +   L PC     F +    L    YQR
Sbjct: 121 TELDQLGKIVANLSKGIDDRGEILTFHNPGEFNLGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++LL +M A + G + G   H + + H+Y +  E   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTLLALM-AQITGNKPGLAYHKIVNAHIYEDQIELMRDVQLKRKP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++ INP+I  L         +DF +  Y+ H AI    SV
Sbjct: 240 YPSPKLEINPDIKSLKDLETWVTLDDFNVTGYQHHDAIKYPFSV 283


>gi|269959596|ref|ZP_06173977.1| thymidylate synthase [Vibrio harveyi 1DA3]
 gi|269835654|gb|EEZ89732.1| thymidylate synthase [Vibrio harveyi 1DA3]
          Length = 283

 Score =  128 bits (322), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ RSW   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRSWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
                 INP I  L         +DF +  YE H  I    SV
Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|119622127|gb|EAX01722.1| thymidylate synthetase, isoform CRA_g [Homo sapiens]
          Length = 186

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 20/152 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSW--------P 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           DY G  +DQ+  ++ +++ +P  RR I+ AWN
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 183


>gi|320157357|ref|YP_004189736.1| thymidylate synthase [Vibrio vulnificus MO6-24/O]
 gi|319932669|gb|ADV87533.1| thymidylate synthase [Vibrio vulnificus MO6-24/O]
          Length = 283

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + ++++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYNVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|152978403|ref|YP_001344032.1| thymidylate synthase [Actinobacillus succinogenes 130Z]
 gi|171704255|sp|A6VMA0|TYSY_ACTSZ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|150840126|gb|ABR74097.1| Thymidylate synthase [Actinobacillus succinogenes 130Z]
          Length = 283

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 135/284 (47%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G      RTG    +     + ++ +   FP++TT+K +WK+ + E
Sbjct: 1   MRQYLDLCQRIVDEGVWLENQRTGKRCLTVINADLTYNAAANEFPIITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNPVRKGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV  L      R  I++  N    D   L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVDDLSRGIDDRGEILTFLNPGEFDLGCLRPCMYSHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ FN I  ++ L +M A + G + G+  H + + H+Y +  +   D+QL R P
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALM-AQITGKKPGQAYHKIVNAHIYEDQLDLMRDVQLKRRP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++ INP+I  L         +DF +  YE H  I    SV
Sbjct: 240 FPSPRLEINPDIKTLEDLETWVTLDDFNVVGYECHEPIKYPFSV 283


>gi|225377246|ref|ZP_03754467.1| hypothetical protein ROSEINA2194_02892 [Roseburia inulinivorans DSM
           16841]
 gi|225210950|gb|EEG93304.1| hypothetical protein ROSEINA2194_02892 [Roseburia inulinivorans DSM
           16841]
          Length = 265

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 17/225 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ + +++ G+            D T   T   FG   R+DLSK FP +T +K   K+
Sbjct: 8   FVDMCKDILENGTSTEGEKVRPHWEDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTAIKT 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
              E+LW  +  SN   +H    ++WDEWAD+DG +G  YG Q      Y   ++DQ+  
Sbjct: 68  CTEEMLWIWQRKSN--NIHDLNSTVWDEWADEDGSIGKAYGYQLGVKHQYKEGMMDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168
           ++  L+ +P+SRR + + +    + +M L PC     F V + +      L+  L QRS 
Sbjct: 126 VIYDLKHNPFSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTHKEGDEKLTLNAILNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           DV     +N+  Y++L  MLA V   Q GE +H + D H+Y+ H 
Sbjct: 186 DVLAANNWNVCQYAVLMHMLAQVCDMQVGELVHVIADAHIYDRHI 230


>gi|260775159|ref|ZP_05884057.1| thymidylate synthase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608860|gb|EEX35022.1| thymidylate synthase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 283

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVEQGEWIENERTGKRCLTVINADLTYDVGHNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  +     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDSAEDFRKLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P+  INP+I  L         +DF +  YE H  I    SV
Sbjct: 241 ASPRFHINPDIKSLEDLETWVTLDDFWVEGYEYHDPIQYPFSV 283


>gi|163803536|ref|ZP_02197405.1| thymidylate synthase [Vibrio sp. AND4]
 gi|159172671|gb|EDP57524.1| thymidylate synthase [Vibrio sp. AND4]
          Length = 283

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLSYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEEFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
                 INP I  L         +DF +  YE H  I    SV
Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|94501822|ref|ZP_01308334.1| thymidylate synthase [Oceanobacter sp. RED65]
 gi|94426043|gb|EAT11039.1| thymidylate synthase [Oceanobacter sp. RED65]
          Length = 283

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G     +RTG    +     + + + +  FPL+TT+K  +K+ + E
Sbjct: 1   MRQYLDLCQRIIDEGVWINNERTGKRCLTVVNADLEYRVDRNEFPLVTTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDE-------WADK-----DGELGPIYGVQWRSWPDYDG 106
            L ++RG  + +     G   WD        W D      + ++G +YGVQ R W   DG
Sbjct: 61  FLGYIRGYDSAADFRNIGCKTWDANANLNDAWLDNPHRKGEDDMGRVYGVQGRRWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I+S +N        L PC     F +    L    YQR
Sbjct: 121 GHIDQLRKIVDNLSKGIDDRGEIMSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVYFFLAIMAQITGHKPGVAYHKIVNAHIYEDQLELMRDVQLKRKPY 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P++IINP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PSPKLIINPDIKSLEDLETWVTVDDFQVEGYQYHDPIAYPFSV 283


>gi|229815429|ref|ZP_04445761.1| hypothetical protein COLINT_02477 [Collinsella intestinalis DSM
           13280]
 gi|229808962|gb|EEP44732.1| hypothetical protein COLINT_02477 [Collinsella intestinalis DSM
           13280]
          Length = 282

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 10/241 (4%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
            D T   T   FG   R+DL + FP LT ++   KS + E+LW + +  +N++ L+ H  
Sbjct: 32  EDGTPAYTIKNFGVTNRYDLREEFPALTLRRTALKSAMDEILWIYQKKSNNINDLNSH-- 89

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
            IWD+WAD+ G +G  YG Q      Y     DQ+  ++  L   PYSRR + + +  + 
Sbjct: 90  -IWDQWADETGSIGKAYGYQIAQKSHYKEGDFDQMDRVLYDLTHTPYSRRIMTNMYTFSD 148

Query: 138 IDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           + +M L PC     + V      D   L+  L QRS D+     +N+  Y++L MM+A  
Sbjct: 149 LSEMHLYPCAYSVTYNVTSEPGCDKPVLNMVLMQRSQDILAANNWNVCQYAILLMMVARH 208

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
                GE +H + D H+Y+ H       + R     P++ +NP + +   F  ED  +  
Sbjct: 209 CDMIAGELLHVIVDAHIYDRHVNIVRELIERPQYPAPKVSLNPEVTNFYDFTTEDLIVED 268

Query: 252 Y 252
           Y
Sbjct: 269 Y 269


>gi|262163913|ref|ZP_06031652.1| thymidylate synthase [Vibrio mimicus VM223]
 gi|262027441|gb|EEY46107.1| thymidylate synthase [Vibrio mimicus VM223]
          Length = 283

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLNLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 AAPQLHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283


>gi|332975745|gb|EGK12627.1| thymidylate synthase [Psychrobacter sp. 1501(2011)]
          Length = 283

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +++ +  FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCQRIVDEGVWVENERTGKRCLTVINADLNYNVGANEFPLVTTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  + +     G + W+  A+++             ++G +YGVQ R W +  G
Sbjct: 61  LLGYLRGYDSAAQFRAIGCNTWNANANENEAWLANPYRKGKDDMGRVYGVQGRRWRNSVG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
              DQ+  I  +LR     R  I++ +N        L PC     F +  GKL     QR
Sbjct: 121 EEFDQLHKIYDNLRNGIDDRGEILTFYNPGEFHMGCLRPCMHTHTFSLLGGKLYLTSSQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG  FN I  ++LL +M A + G + G+  H + + H+Y +  +   D+QL R P
Sbjct: 181 SCDVPLGQNFNQIQVFTLLALM-AQITGHEAGKAYHKIVNAHIYEDQLQLMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              P++ INP I  L         +DF +  Y+ H +I    SV
Sbjct: 240 YPAPKLHINPEIKSLEDIETWVTLDDFRVEGYQYHESIAYPFSV 283


>gi|326794010|ref|YP_004311830.1| Thymidylate synthase [Marinomonas mediterranea MMB-1]
 gi|326544774|gb|ADZ89994.1| Thymidylate synthase [Marinomonas mediterranea MMB-1]
          Length = 283

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +++  G FPL+TT+K +WKS + E
Sbjct: 1   MKQYLDLCQRILDEGVWVDNERTGKRCLTVINADLTYNVGAGEFPLVTTRKSYWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106
           +L +LRG  N +   + G   WD  A++            + ++G  YG   R++P  DG
Sbjct: 61  ILGYLRGYDNAADFRQLGTKTWDANANENQVWLNNPYRKGEDDMGLCYGAIGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID +  IV  L+    +R  I++ ++        L PC     F +    L     QR
Sbjct: 121 GSIDLLKQIVHDLKRGVDNRGEILTFYHPGAFHMACLRPCMYSHHFSLLGETLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +L  ++A + G + G   H L + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVLLALVAQITGKKAGYAYHKLVNSHIYEDQLAPMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P++ INP+I  L         +DF +  YE H AI    SV
Sbjct: 241 EPPRLKINPDIKTLEDIETWVTMDDFEVEGYECHDAIQYPFSV 283


>gi|262401626|ref|ZP_06078192.1| thymidylate synthase [Vibrio sp. RC586]
 gi|262352043|gb|EEZ01173.1| thymidylate synthase [Vibrio sp. RC586]
          Length = 283

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MQQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283


>gi|149911436|ref|ZP_01900053.1| thymidylate synthase [Moritella sp. PE36]
 gi|149805467|gb|EDM65474.1| thymidylate synthase [Moritella sp. PE36]
          Length = 283

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + +D++   FPL+TT+K  WKS + E
Sbjct: 1   MKQYLDLCNRIVSEGVWVENERTGKRCLTVINADLTYDVANNEFPLVTTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           ++ ++RG  N +     G   WD  A+ +             ++G +YG   R+W    G
Sbjct: 61  IIGYIRGYDNAADFRALGTKTWDANANDNPAWLANPHRKGKDDMGYVYGACARNWVKPQG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  I+  L     +R  I++ +N    +   L PC     F +    L     QR
Sbjct: 121 GTVDLLRQIIDDLSNGIDNRGEILTFFNPGAFELGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVHVLLALVAQITGHKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            LP++ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 QLPKLHINPKIKTLEDLETWVTMDDFEVTDYQHHDAIKYPFSV 283


>gi|258624715|ref|ZP_05719649.1| thymidylate synthase [Vibrio mimicus VM603]
 gi|258583002|gb|EEW07817.1| thymidylate synthase [Vibrio mimicus VM603]
          Length = 283

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283


>gi|258620343|ref|ZP_05715381.1| thymidylate synthase [Vibrio mimicus VM573]
 gi|258587222|gb|EEW11933.1| thymidylate synthase [Vibrio mimicus VM573]
          Length = 283

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWTKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283


>gi|229138942|ref|ZP_04267521.1| Thymidylate synthase [Bacillus cereus BDRD-ST26]
 gi|228644567|gb|EEL00820.1| Thymidylate synthase [Bacillus cereus BDRD-ST26]
          Length = 181

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 50/170 (29%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
                        +K G LG +YG QWR+W    G  +DQ+  +++ ++ 
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKK 175


>gi|158079499|ref|YP_001504312.1| putative thymidylate synthase [Enterococcus phage phiEF24C]
 gi|157890343|dbj|BAF81471.1| putative thymidylate synthase [Enterococcus phage phiEF24C]
          Length = 315

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 47/276 (17%)

Query: 4   YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           Y DL+  +IK G             D T   T+   G         G PLL +K V  K 
Sbjct: 7   YKDLVMDIIKNGVTELPEGTRAVYADGTPATTKFIEGVNFTITPDMGAPLLRSKHVGIKW 66

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGV----QWRSWPDYDGNV- 108
            + EL W  +  SN VS+L   GV+IWDEW  +DG +G  YG     + R  P Y G+V 
Sbjct: 67  ALTELQWIWQEMSNEVSWLKERGVTIWDEWEQEDGTIGKAYGYALFNKERFIPVYSGDVE 126

Query: 109 -------------------------------IDQISSIVQSLRADPYSRRHIVSAWNVAL 137
                                          ++Q+ ++++ L++ P SRR + + WNV  
Sbjct: 127 LAKNRKAGSLIPKVVPKKGGWIAGTHQPYLKLNQVEAVIEQLKSTPNSRRIMTTLWNVED 186

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           +  M+L PC     + V  GKL+  +  RS DV LG+PFNI  Y  L +++A+ +G + G
Sbjct: 187 LYDMSLEPCVWTTHWTVVEGKLNLHVKARSSDVCLGLPFNIIQYHALQLVMANTVGLELG 246

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRS-PRTLPQMII 232
               T  + H+Y  H E  + Q++   P  +P++++
Sbjct: 247 NLYWTSDNAHIYERHLELVEKQVNEPIPEEVPKLVL 282


>gi|322515113|ref|ZP_08068119.1| thymidylate synthase [Actinobacillus ureae ATCC 25976]
 gi|322118891|gb|EFX91076.1| thymidylate synthase [Actinobacillus ureae ATCC 25976]
          Length = 283

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 21/278 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + +D++ G FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYDVANGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+++             ++G +YG   R++P  DG
Sbjct: 61  LLGYIRGYDNAADFRNLGTKSWDVNANQNAAWLANPYRKGEDDMGLVYGAVGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID +  IV  L+    +R  I + ++  +     L PC     F + +G L     QR
Sbjct: 121 GSIDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSP 224
           S DV LG+ +N I  Y+ L +M A +   + G+  H + + H+Y +  E   D+QL R P
Sbjct: 181 SADVPLGLNWNMIQCYTFLALM-AQITEHKAGQAFHKIVNAHIYEDQLELMRDVQLKREP 239

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
              P++ INP I  L         +DF +  YE H +I
Sbjct: 240 LGAPKLWINPEIKSLEDLETWVTLDDFKVEDYEYHPSI 277


>gi|325847871|ref|ZP_08170093.1| thymidylate synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480889|gb|EGC83942.1| thymidylate synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 288

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 21/273 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRD---------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51
            +Y+++ +++++ G D              G    + F  Q      KG  PL++ +K+ 
Sbjct: 6   KKYIEIAKNILENGYDEEKLNHEVRAVWEDGESAYTKFLPQEIVRYEKGEVPLISLRKIA 65

Query: 52  WKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSW---PDYDG 106
           WKS + E+LW  +  SN   L   ++ V+ WD W + +G LG  YG Q       P+  G
Sbjct: 66  WKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNDEGNLGTAYGYQINKKFKSPE-TG 124

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           N+ +QI  ++  ++ +P +RR I++  +V  +  M L PC  L  + V    L+  L QR
Sbjct: 125 NMTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGDYLNLTLIQR 184

Query: 167 SGDVFLGIP---FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE--QADLQLS 221
           SGD          N   Y +L  M+A V G++ G+F+H + + H+Y  H    +  +++ 
Sbjct: 185 SGDFLAAAAPGGINAFQYYVLLRMIAQVTGYKAGDFVHFIQNYHIYKKHIPIVKKIMEVK 244

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
              ++ P++ INP+I D   F  +DF L  Y P
Sbjct: 245 VDEKSRPRLEINPDIKDFKDFTIDDFKLLDYYP 277


>gi|262172248|ref|ZP_06039926.1| thymidylate synthase [Vibrio mimicus MB-451]
 gi|261893324|gb|EEY39310.1| thymidylate synthase [Vibrio mimicus MB-451]
          Length = 283

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLNLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283


>gi|23343946|gb|AAN16904.1| mutant thymidilate synthetase [Vibrio cholerae]
          Length = 283

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV L + FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLWLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|260771789|ref|ZP_05880707.1| thymidylate synthase [Vibrio metschnikovii CIP 69.14]
 gi|260613081|gb|EEX38282.1| thymidylate synthase [Vibrio metschnikovii CIP 69.14]
          Length = 283

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WKS V E
Sbjct: 1   MKQYLDLCQRIVDQGIWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKSAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL ++RG  + +   + G   WD  A+          + GE  +G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDSAADFRQLGTKTWDANANMNAAWLANPYRQGEDDMGRVYGVQGRAWTKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAVMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKRHPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
              Q  INP I  L         +DF++  Y+ H  I    SV
Sbjct: 241 PAAQFHINPEIRSLEDLETWVTLDDFSVTDYQHHDPIQYPFSV 283


>gi|210633178|ref|ZP_03297714.1| hypothetical protein COLSTE_01627 [Collinsella stercoris DSM 13279]
 gi|210159218|gb|EEA90189.1| hypothetical protein COLSTE_01627 [Collinsella stercoris DSM 13279]
          Length = 282

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 10/241 (4%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
            D T   T   FG   R+DL + FP LT ++   KS + E+LW + +  +N++ L+ H  
Sbjct: 32  EDGTPAYTIKNFGITNRYDLREEFPALTLRRTALKSAMDEILWIYQKKSNNINDLNSH-- 89

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
            IWD+WAD+ G +G  YG Q      Y     DQ+  ++  L   PYSRR + + +  + 
Sbjct: 90  -IWDQWADETGSIGKAYGYQIAQKSHYREGDFDQMDRVLYDLTHTPYSRRIMTNMYTFSD 148

Query: 138 IDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           + +M L PC     + V      D   L+  L QRS D+     +N+  Y++L MM+A  
Sbjct: 149 LSEMHLYPCAYSVTYNVTSEPGCDKPVLNMVLMQRSQDILAANNWNVCQYAILLMMVARH 208

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
                GE +H + D H+Y+ H +     + R     P++ +NP + +   F  +D  +  
Sbjct: 209 CDMIAGELLHVIVDAHIYDRHVDIVRELIERPQFPAPKVSLNPEVTNFYDFTTDDLIVED 268

Query: 252 Y 252
           Y
Sbjct: 269 Y 269


>gi|310722251|ref|YP_003969075.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4]
 gi|306021094|gb|ADM79629.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4]
          Length = 173

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 96/155 (61%), Gaps = 17/155 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+  +I  G  + DRTGVGTRS FG  +RFDLSKGFP  T K++ +  VV ELL
Sbjct: 1   MIQYTDLVCDIITNGRKKTDRTGVGTRSVFGRMLRFDLSKGFPATTCKRLAFVPVVGELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WF++G +NV +L +          +IWD+  +K        DG LGP+YG QWR +   +
Sbjct: 61  WFMQGSTNVEHLRKLTYGENSDRKTIWDDNYNKQAVDLGYSDGYLGPVYGKQWRMFG--N 118

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
            N +DQ+ +++  ++A+P SRR +V AWN   I+K
Sbjct: 119 KNPVDQLQNVIDQIKANPDSRRLLVVAWNPEDIEK 153


>gi|21700307|gb|AAM75813.1|AF450270_1 bifunctional dihydrofolate reductase-thymidylate synthase
           [Cercomonas longicauda]
          Length = 314

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 91/167 (54%), Gaps = 22/167 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           +Y+DL+R +   G  R DRTGVG +  FG  M+F L  G  PLLT +K+ WK VV ELLW
Sbjct: 148 EYIDLIRRIRDQGEIRTDRTGVGIKCVFGNMMKFSLENGQIPLLTIRKIFWKGVVEELLW 207

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWR--------SW 101
            LRG ++   L   GV+IW     ++            G+LGPIYG QWR        + 
Sbjct: 208 MLRGKTHSRDLEEKGVNIWRANGSREALDRLGMVDREVGDLGPIYGWQWRHSGAXYTTAH 267

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIV-SAWNVALIDKMALPPCH 147
            DY G  +DQI  ++  L+  P   R I+  +WN   + +MALPPCH
Sbjct: 268 TDYSGFGVDQIKDVISQLQNQPQKNRRILFCSWNPKDLKQMALPPCH 314


>gi|212697068|ref|ZP_03305196.1| hypothetical protein ANHYDRO_01633 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675843|gb|EEB35450.1| hypothetical protein ANHYDRO_01633 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 288

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 21/273 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRD---------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51
            +Y+++ +++++ G D              G    + F  Q      KG  PL++ +K+ 
Sbjct: 6   KKYIEIAKNILENGYDEEKLNHEVRAVWEDGESAYTKFLPQEIVRYEKGEVPLISLRKIA 65

Query: 52  WKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSW---PDYDG 106
           WKS + E+LW  +  SN   L   ++ V+ WD W + +G LG  YG Q       P+  G
Sbjct: 66  WKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNDEGNLGTAYGYQVNKKFKSPE-TG 124

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           N+ +QI  ++  ++ +P +RR I++  +V  +  M L PC  L  + V    L+  L QR
Sbjct: 125 NMTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGDYLNLTLIQR 184

Query: 167 SGDVFLGIP---FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE--QADLQLS 221
           SGD          N   Y +L  M+A V G++ G+F+H + + H+Y  H    +  +++ 
Sbjct: 185 SGDFLAAAAPGGINAFQYYVLLRMIAQVTGYKAGDFVHFIQNYHIYKKHIPIVKKIMEVK 244

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
              ++ P + INP+I D   F  +DF L  Y P
Sbjct: 245 VDEKSRPILEINPDIKDFKDFTIDDFNLVDYYP 277


>gi|256545413|ref|ZP_05472775.1| thymidylate synthase [Anaerococcus vaginalis ATCC 51170]
 gi|256398809|gb|EEU12424.1| thymidylate synthase [Anaerococcus vaginalis ATCC 51170]
          Length = 287

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 21/273 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRT---------GVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51
            +Y+ + + +++ G D  +           G    + +  Q      KG  PL++ +K+ 
Sbjct: 5   EKYIKIAKEILEKGYDEEELNKEVRPVWDDGESAYTKYLPQQVVRYEKGELPLISLRKIA 64

Query: 52  WKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSW---PDYDG 106
           WKS + E+LW  +  SN   L   ++ V+ WD W ++DG LG  YG Q       P+  G
Sbjct: 65  WKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNEDGNLGTAYGYQINKKFKSPE-TG 123

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
            + +QI  ++  ++ +P +RR I++  +V  +  M L PC  L  + V    L+  L QR
Sbjct: 124 QMTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGEYLNLTLVQR 183

Query: 167 SGDVFLGIP---FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLS 221
           SGD          N   Y +L  M+A V G++ G+F+H + + H+Y  H       L++ 
Sbjct: 184 SGDFLAAAAPGGINAFQYYVLLRMVAQVTGYKAGDFVHFIQNYHIYKKHIPSVKKILEIK 243

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
              ++ P++ INP+I +   F  +DF L  Y P
Sbjct: 244 VDEKSKPRLEINPDIKEFKDFTIDDFKLIDYYP 276


>gi|319946995|ref|ZP_08021229.1| thymidylate synthase [Streptococcus australis ATCC 700641]
 gi|319747043|gb|EFV99302.1| thymidylate synthase [Streptococcus australis ATCC 700641]
          Length = 279

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G  M FDL+KG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGTTANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKEMLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   + G +G  YG   +          D I+ I++ L A+P++RR+I+S W+
Sbjct: 90  QVHYWNDWEVGETGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141

Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEESEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFEIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 VLEDYDP 268


>gi|254520802|ref|ZP_05132858.1| thymidylate synthase [Clostridium sp. 7_2_43FAA]
 gi|226914551|gb|EEH99752.1| thymidylate synthase [Clostridium sp. 7_2_43FAA]
          Length = 280

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 118/225 (52%), Gaps = 13/225 (5%)

Query: 35  RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEW-ADKDGELG 91
           ++D+SKG FP+ T + V WKS + E+LW  +  SN +S L   G++ W +W  +  G +G
Sbjct: 53  KYDISKGEFPITTLRPVAWKSGIKEILWIYQKASNELSVLEEMGITWWGDWEVNGTGTIG 112

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLF 150
             YG   + +        D ++ ++  L+ +PY+RRHI+  +  A  ++   L PC  L 
Sbjct: 113 QRYGATVKKY--------DLMNKLLDGLKNEPYTRRHIIDLYQYADFEETPGLNPCAFLT 164

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
            + V +  L   L+QRS D       N   Y  L MM+A  +G + G F+H + ++H+Y+
Sbjct: 165 VWSVRDKYLDVTLHQRSSDYCTAGHINKTQYVALMMMVARHVGLKPGVFMHVVDNLHIYD 224

Query: 211 NHFEQADLQLSRSPR-TLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
            H EQA   + R+P    P++I+     +   F  +DF +  YEP
Sbjct: 225 RHVEQAKELIERTPSDKQPKLILKEGKTNFYDFTIDDFEMVDYEP 269


>gi|269468616|gb|EEZ80260.1| thymidylate synthase [uncultured SUP05 cluster bacterium]
          Length = 284

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 130/278 (46%), Gaps = 20/278 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M  Y+D+ + ++  G      RTG  T +  G     DLS G  P++TTKK+ WK+ V E
Sbjct: 1   MKTYIDIGKRILDEGEWVTNTRTGKKTLTIIGATFEHDLSDGTVPVITTKKLFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDY-D 105
           +L ++RG  + +     G + W+  A+++             ++G  YGV  R++P   D
Sbjct: 61  MLGYIRGYRSAAQFRSIGCNTWNANANENQAWLDNPHRLGKDDMGLCYGVIGRAFPGIED 120

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ   IV  L      RR I++  +  LI +  LP C     F +    L  + YQ
Sbjct: 121 DEPLDQYKKIVDDLSKGVDDRREILTFNHPNLIHRACLPACMHTHHFNLLGDNLYIESYQ 180

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ-ADLQLSRSP 224
           RS D  LG PFN    + L ++ A + G       H L ++HLY +  +   + Q+ R P
Sbjct: 181 RSSDFALGQPFNHFQVAFLLLITAQITGKTPKTMRHHLSNIHLYEDQVDTFKNEQVEREP 240

Query: 225 RTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAI 258
             LP+  INP+I  L         +DF L  YE H AI
Sbjct: 241 MALPKFKINPDIKTLEDLETWVTMDDFELIDYEHHPAI 278


>gi|146318488|ref|YP_001198200.1| thymidylate synthase [Streptococcus suis 05ZYH33]
 gi|146320681|ref|YP_001200392.1| thymidylate synthase [Streptococcus suis 98HAH33]
 gi|253751616|ref|YP_003024757.1| thymidylate synthase [Streptococcus suis SC84]
 gi|253753518|ref|YP_003026659.1| thymidylate synthase [Streptococcus suis P1/7]
 gi|253755657|ref|YP_003028797.1| thymidylate synthase [Streptococcus suis BM407]
 gi|166231739|sp|A4W0V3|TYSY_STRS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231741|sp|A4VUL1|TYSY_STRSY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145689294|gb|ABP89800.1| Thymidylate synthase [Streptococcus suis 05ZYH33]
 gi|145691487|gb|ABP91992.1| Thymidylate synthase [Streptococcus suis 98HAH33]
 gi|251815905|emb|CAZ51519.1| thymidylate synthase [Streptococcus suis SC84]
 gi|251818121|emb|CAZ55915.1| thymidylate synthase [Streptococcus suis BM407]
 gi|251819764|emb|CAR45658.1| thymidylate synthase [Streptococcus suis P1/7]
 gi|292558271|gb|ADE31272.1| Thymidylate synthase [Streptococcus suis GZ1]
          Length = 279

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 131/247 (53%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  +N +S L  ++
Sbjct: 30  KDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEILWIYQDQTNDLSVLQEKY 89

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           GV  W++W  +  G +G  YG   +          D IS I++ L  +P++RR+++S W+
Sbjct: 90  GVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKILKQLEENPWNRRNVISLWD 141

Query: 135 VALIDKMA-LPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               D+ A L PC    LF     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFDQSAGLLPCAFQTLFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R+P  + P++++N P+  +    R EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRLVLNVPDGTNFFDIRAEDF 261

Query: 248 TLRSYEP 254
            L  Y P
Sbjct: 262 ELVDYNP 268


>gi|319758054|gb|ADV69996.1| thymidylate synthase [Streptococcus suis JS14]
          Length = 279

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 130/247 (52%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  +N +S L  ++
Sbjct: 30  KDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEILWIYQDQTNDLSVLQEKY 89

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           GV  W++W  +  G +G  YG   +          D IS I++ L   P++RR+++S W+
Sbjct: 90  GVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKILKQLEEKPWNRRNVISLWD 141

Query: 135 VALIDKMA-LPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               D+ A L PC    LF     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFDQSAGLLPCAFQTLFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R+P  + P++++N P+  +    R EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRLVLNVPDGTNFFDIRAEDF 261

Query: 248 TLRSYEP 254
            L  Y P
Sbjct: 262 ELVDYNP 268


>gi|223932110|ref|ZP_03624114.1| Thymidylate synthase [Streptococcus suis 89/1591]
 gi|302023730|ref|ZP_07248941.1| thymidylate synthase [Streptococcus suis 05HAS68]
 gi|330832764|ref|YP_004401589.1| thymidylate synthase [Streptococcus suis ST3]
 gi|223899091|gb|EEF65448.1| Thymidylate synthase [Streptococcus suis 89/1591]
 gi|329306987|gb|AEB81403.1| thymidylate synthase [Streptococcus suis ST3]
          Length = 279

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 25/250 (10%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  +N +S L  ++
Sbjct: 30  KDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEILWIYQDQTNDLSVLQEKY 89

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           GV  W++W  +  G +G  YG   +          D IS I++ L  +P++RR+++S W+
Sbjct: 90  GVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKILKQLEENPWNRRNVISLWD 141

Query: 135 VALIDKMA--LPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTM 186
               D+ A  LP   C FQ   D  ++  ++Y      QRS D+ +    N   Y  L M
Sbjct: 142 YEAFDQSAGLLP---CAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQM 198

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRY 244
           M+A   G++ G+F + + ++H+Y+N FEQA+  L R+P  + P++++N P+  +    R 
Sbjct: 199 MIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRLVLNVPDGTNFFDIRA 258

Query: 245 EDFTLRSYEP 254
           EDF L  Y P
Sbjct: 259 EDFELVDYNP 268


>gi|257451431|ref|ZP_05616730.1| thymidylate synthase [Fusobacterium sp. 3_1_5R]
 gi|257466896|ref|ZP_05631207.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918043|ref|ZP_07914283.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317058011|ref|ZP_07922496.1| thymidylate synthase [Fusobacterium sp. 3_1_5R]
 gi|313683687|gb|EFS20522.1| thymidylate synthase [Fusobacterium sp. 3_1_5R]
 gi|313691918|gb|EFS28753.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 272

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 123/249 (49%), Gaps = 32/249 (12%)

Query: 20  DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL--LWFLRGDSNVSYLHRHG 76
           D T    +   GYQ R D S K   L+T++K  WKS + EL  +W+L+ + NV  L   G
Sbjct: 31  DGTPAYYKQVVGYQFRLDNSGKEAFLITSRKAAWKSSIRELYWIWYLQSN-NVDELVDLG 89

Query: 77  VSIWDEWADKDGELGPIYG-------VQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
              W+EW  +DG +G  YG        Q++S  DY          ++  ++ +P SRR +
Sbjct: 90  CKFWNEWKQEDGTIGKAYGYQIGKKTFQYKSQLDY----------VIGEIKNNPNSRRIL 139

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
              W    +DKMAL PC  L Q+ V NGKL  ++ QRS DV LG+  N+  Y +L  ++A
Sbjct: 140 TEIWVPEDLDKMALTPCVHLTQWTVLNGKLYLEVRQRSCDVALGLVANVFQYQVLHKLVA 199

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF-- 247
                  G+ I T+ + H+Y+ H E    Q+  +    P       I+DL     E+F  
Sbjct: 200 RECNLNCGDLIWTIHNAHIYDRHLEDLQKQVRETGTEKP-------ILDLGEEGLENFHQ 252

Query: 248 --TLRSYEP 254
             T+ +Y+P
Sbjct: 253 KVTIENYKP 261


>gi|207341205|gb|EDZ69321.1| YOR074Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 164

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 89/154 (57%), Gaps = 22/154 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDL-SKGFPLLTTKKVHWKSVVHEL 59
            QYLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV  + ++ EL
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70

Query: 60  LWFLRGDSNVSYLHRHGVSIWD-----EWADKD-------GELGPIYGVQWRSW------ 101
           LWFL GD++ + L   GV IWD     E+ DK        G+LGP+YG QWR +      
Sbjct: 71  LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
              DY G  IDQ+  ++  L+ +PY RR I+SAW
Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAW 164


>gi|153840318|ref|ZP_01992985.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810]
 gi|149746021|gb|EDM57151.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810]
          Length = 255

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 111/240 (46%), Gaps = 17/240 (7%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE-- 89
           FPL+TT+K  WK+ V ELL ++RG  N     + G   WD  A+          + GE  
Sbjct: 16  FPLVTTRKSFWKAAVAELLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDD 75

Query: 90  LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           +G +YGVQ R+W   DG  IDQ+  IV  L      R  I++ +N        L PC   
Sbjct: 76  MGRVYGVQGRAWAKPDGGHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYS 135

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
             F + +  L     QRS DV LG+ FN+    +   ++A + G + G+  H + + H+Y
Sbjct: 136 HHFSLLDDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIY 195

Query: 210 NNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            +  E   D+QL R P   P   INP I  L         +DF +  YE H  I    SV
Sbjct: 196 EDQLELMRDVQLKREPLQAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYPFSV 255


>gi|322511193|gb|ADX06506.1| putative thymidylate synthase and pyrimidine hydroxymethylase
           [Organic Lake phycodnavirus 2]
          Length = 171

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 87/157 (55%), Gaps = 14/157 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYL +++ +   G     R G  T S  G  M F L     P+LTTKKV  K+ + EL W
Sbjct: 16  QYLAIVKEICLSGHKIEGRNGF-TYSKHGACMSFSLENNTLPILTTKKVALKTCLKELFW 74

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW--------PDYDGNVIDQIS 113
           FL G +N   L+R  V IWD  A+   +LGPIYG QWR +         DY    IDQI 
Sbjct: 75  FLSGSTNNDVLNRQNVHIWDPHAETSNDLGPIYGHQWRHFNAPYVDCESDYTNQGIDQIQ 134

Query: 114 SIVQSLRADP---YSRRHIVSAWNVALIDKMALPPCH 147
            I+ SL  DP   YSRR +VS+WN   +DKM+LPPCH
Sbjct: 135 YIIDSLN-DPEKRYSRRLVVSSWNPCQLDKMSLPPCH 170


>gi|322385231|ref|ZP_08058878.1| thymidylate synthase [Streptococcus cristatus ATCC 51100]
 gi|321270855|gb|EFX53768.1| thymidylate synthase [Streptococcus cristatus ATCC 51100]
          Length = 279

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I  I+Q L A+P++RR+I+S W+
Sbjct: 90  HVHYWNDWEVGDTGTIGQRYGAVVKKH--------DIIHKILQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N PN  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPNGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L +Y+P
Sbjct: 262 ELLNYDP 268


>gi|306824917|ref|ZP_07458261.1| thymidylate synthase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304433128|gb|EFM36100.1| thymidylate synthase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 279

 Score =  119 bits (298), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DL+KG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNSKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|306829804|ref|ZP_07462991.1| thymidylate synthase [Streptococcus mitis ATCC 6249]
 gi|304427815|gb|EFM30908.1| thymidylate synthase [Streptococcus mitis ATCC 6249]
          Length = 279

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNSKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLGREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|182682904|ref|YP_001837028.1| thymidylate synthase [Enterobacteria phage EPS7]
 gi|182630616|gb|ACB97548.1| thymidylate synthase [Enterobacteria phage EPS7]
          Length = 284

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 135/284 (47%), Gaps = 20/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QY++  + +++ G      RTGV   +       F++  G  PL+TT+K   K  + E
Sbjct: 1   MKQYIETGKRILEEGVWVTNPRTGVRCLTIIDADFTFNVGAGELPLVTTRKAFAKQAIME 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD----------GE--LGPIYGVQWRSWPDYDG 106
           ++ +LRG  + +     GV+ W+  A+++          GE  +G +YGVQ R W + DG
Sbjct: 61  MIGYLRGYDSAAQFRAIGVNTWNANANENIAWLGNPFRKGEDDMGRVYGVQGRHWTNSDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
            V DQ++ +  +L+     R  I++        K  L PC    QF +    L    +QR
Sbjct: 121 MVFDQLAKVYHNLKRGIDDRGEILTFGTRGEFRKGCLRPCMHTHQFSILGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE--QADLQLSRSP 224
           S D  LG  FN+     L  ++A + G + G     + ++H+Y + +       Q  R P
Sbjct: 181 SNDFLLGQVFNMVQCYALLAIMAQITGLKPGIARQKIINLHIYEDQYNVLMEHKQFDREP 240

Query: 225 RTLPQMIINPNIV---DLLSF-RYEDFTLRSYEPHAAILAKVSV 264
              P + INPNI    D+L++   +DFT+R YE H AI    +V
Sbjct: 241 FAPPTLEINPNIRTLDDVLTWVSKDDFTVRGYEHHPAIAYPFTV 284


>gi|112383430|gb|ABI17852.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
          Length = 195

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 21/147 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 49  RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D  G       +LGP+YG QWR +       
Sbjct: 109 WFLRGETNAXLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRR 127
             +YDG  +DQI  IV++++A+P  RR
Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195


>gi|322376984|ref|ZP_08051477.1| thymidylate synthase [Streptococcus sp. M334]
 gi|321282791|gb|EFX59798.1| thymidylate synthase [Streptococcus sp. M334]
          Length = 279

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DL+KG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEMLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   R          D I+ +++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVRKH--------DIINKLLKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|112383428|gb|ABI17851.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
 gi|118500801|gb|ABK97597.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
          Length = 195

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 21/147 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 49  RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D  G       +LGP+YG QWR +       
Sbjct: 109 WFLRGETNARLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRR 127
             +YDG  +DQI  IV++++A+P  RR
Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195


>gi|157151425|ref|YP_001450432.1| thymidylate synthase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189036950|sp|A8AXC2|TYSY_STRGC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157076219|gb|ABV10902.1| thymidylate synthase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 279

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I+Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKILQQLAANPWNRRNIISLWD 141

Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC     F V    ++  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETEGLLPCAFQTMFDVRRVDEDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELLDYDP 268


>gi|307708422|ref|ZP_07644888.1| thymidylate synthase [Streptococcus mitis NCTC 12261]
 gi|307615521|gb|EFN94728.1| thymidylate synthase [Streptococcus mitis NCTC 12261]
          Length = 279

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYMTGAFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ +++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLEANPWNRRNIISLWD 141

Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|307706250|ref|ZP_07643064.1| thymidylate synthase [Streptococcus mitis SK321]
 gi|307618341|gb|EFN97494.1| thymidylate synthase [Streptococcus mitis SK321]
          Length = 279

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DL+KG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|322391615|ref|ZP_08065084.1| thymidylate synthase [Streptococcus peroris ATCC 700780]
 gi|321145698|gb|EFX41090.1| thymidylate synthase [Streptococcus peroris ATCC 700780]
          Length = 279

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  +N   +   ++
Sbjct: 30  KDGTVANSKYVTGAFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQTNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I++ L A+P++RR+I+S W+
Sbjct: 90  SVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|327462282|gb|EGF08609.1| thymidylate synthase [Streptococcus sanguinis SK1]
          Length = 279

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I+Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKILQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDVTLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELIDYDP 268


>gi|322375542|ref|ZP_08050054.1| thymidylate synthase [Streptococcus sp. C300]
 gi|321279250|gb|EFX56291.1| thymidylate synthase [Streptococcus sp. C300]
          Length = 279

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DL+KG FP+ T + +  KS + E+LW  +  SN   +  +++
Sbjct: 30  KDGTVANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNNKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               +    L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEATDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|332360702|gb|EGJ38511.1| thymidylate synthase [Streptococcus sanguinis SK49]
          Length = 279

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I++I   +Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKIGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELLDYDP 268


>gi|307706041|ref|ZP_07642862.1| thymidylate synthase [Streptococcus mitis SK564]
 gi|307620399|gb|EFN99514.1| thymidylate synthase [Streptococcus mitis SK564]
          Length = 279

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DL+KG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ +++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|293365781|ref|ZP_06612487.1| thymidylate synthase [Streptococcus oralis ATCC 35037]
 gi|307703351|ref|ZP_07640294.1| thymidylate synthase [Streptococcus oralis ATCC 35037]
 gi|291315714|gb|EFE56161.1| thymidylate synthase [Streptococcus oralis ATCC 35037]
 gi|307623087|gb|EFO02081.1| thymidylate synthase [Streptococcus oralis ATCC 35037]
          Length = 279

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN +  L+ ++
Sbjct: 30  KDGTVANSKYVTGAFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLDVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|290580609|ref|YP_003485001.1| thymidylate synthase [Streptococcus mutans NN2025]
 gi|254997508|dbj|BAH88109.1| thymidylate synthase [Streptococcus mutans NN2025]
          Length = 279

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           ++     ++   G    +DL+KG FP+ T + +  KS + E+ W  +  +N ++ L+ ++
Sbjct: 30  KNGKTANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEVFWIYQDQTNELAILNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           GV  W++W  K  G +G  YG   +          D ++ I++ L  +P++RR+++S W+
Sbjct: 90  GVRYWNDWEVKQTGTIGERYGAIVKKH--------DIMNKILKQLEENPWNRRNVISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               +K   L PC    +F     NG+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEKTEGLLPCAFQTMFDVRRVNGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P +++N PN  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPVVCQPHLVLNVPNKTNFFDIKPEDF 261

Query: 248 TLRSYEP 254
            L  YEP
Sbjct: 262 ELLDYEP 268


>gi|324992986|gb|EGC24906.1| thymidylate synthase [Streptococcus sanguinis SK405]
          Length = 279

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLGLLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I+Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKILQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDVTLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELLDYDP 268


>gi|332360752|gb|EGJ38560.1| thymidylate synthase [Streptococcus sanguinis SK355]
          Length = 279

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 125/247 (50%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I  I+Q L A+P++RR+I+S W+
Sbjct: 90  HVHYWNDWEVGDTGTIGQRYGAVVKKH--------DIIHKILQQLEANPWNRRNIISLWD 141

Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSECQPRLVLNVPDETNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELLDYDP 268


>gi|322387374|ref|ZP_08060984.1| thymidylate synthase [Streptococcus infantis ATCC 700779]
 gi|321141903|gb|EFX37398.1| thymidylate synthase [Streptococcus infantis ATCC 700779]
          Length = 279

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  +N   +   ++
Sbjct: 30  KDGTVANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQTNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|307704483|ref|ZP_07641392.1| thymidylate synthase [Streptococcus mitis SK597]
 gi|307621952|gb|EFO00980.1| thymidylate synthase [Streptococcus mitis SK597]
          Length = 279

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DL+KG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ +++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|112383432|gb|ABI17853.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
 gi|112383434|gb|ABI17854.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
 gi|112383436|gb|ABI17855.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
          Length = 195

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 21/147 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT   FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 49  RQYLELIDRIMKTGIVKEDRTGVGTIGLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSW------- 101
           WFLRG++N   L    + IWD     E+ D  G       +LGP+YG QWR +       
Sbjct: 109 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168

Query: 102 -PDYDGNVIDQISSIVQSLRADPYSRR 127
             +YDG  +DQI  IV++++A+P  RR
Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195


>gi|327474155|gb|EGF19565.1| thymidylate synthase [Streptococcus sanguinis SK408]
          Length = 279

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNEKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I +I   +Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIIHKI---LQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 VLLDYDP 268


>gi|125717921|ref|YP_001035054.1| thymidylate synthase [Streptococcus sanguinis SK36]
 gi|166231740|sp|A3CMU9|TYSY_STRSV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|125497838|gb|ABN44504.1| Thymidylate synthase, putative [Streptococcus sanguinis SK36]
 gi|324995705|gb|EGC27617.1| thymidylate synthase [Streptococcus sanguinis SK678]
 gi|328946147|gb|EGG40292.1| thymidylate synthase [Streptococcus sanguinis SK1087]
          Length = 279

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I++I   +Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y P
Sbjct: 262 ELLDYNP 268


>gi|24379388|ref|NP_721343.1| thymidylate synthase [Streptococcus mutans UA159]
 gi|62901374|sp|Q8DUI4|TYSY_STRMU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|24377318|gb|AAN58649.1|AE014935_1 thymidylate synthase [Streptococcus mutans UA159]
          Length = 279

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           ++     ++   G    +DL+KG FP+ T + +  KS + E+ W  +  +N ++ L+ ++
Sbjct: 30  KNGKTANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEVFWIYQDQTNELAILNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           GV  W++W  K  G +G  YG   +          D ++ I++ L  +P++RR+++S W+
Sbjct: 90  GVRYWNDWEVKQTGTIGERYGAIVKKH--------DIMNKILKQLEENPWNRRNVISLWD 141

Query: 135 VALIDKM-ALPPCHCLFQFYVDNGK----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               +K   L PC     F V   K    L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEKTEGLLPCAFQIMFDVRRVKGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P +++N PN  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPVVCQPHLVLNVPNKTNFFDIKPEDF 261

Query: 248 TLRSYEP 254
            L  YEP
Sbjct: 262 ELLDYEP 268


>gi|325687392|gb|EGD29413.1| thymidylate synthase [Streptococcus sanguinis SK72]
          Length = 279

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I++I   +Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y P
Sbjct: 262 DLLDYNP 268


>gi|262067846|ref|ZP_06027458.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693]
 gi|291378569|gb|EFE86087.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693]
          Length = 275

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
           D T    +S  GYQ R D S     LLTT++  WKS + E+ W +L   +NV+ L + G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSDDEAFLLTTRQCPWKSAIKEIYWIWLLQSNNVNELEKLGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             W+E+  KDG +G  YG Q             Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWNEFKLKDGTIGKSYGHQL---AKETFGYKSQLHYVINELKENPNSRRIMTEIWIPEE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A   G +  
Sbjct: 150 LHEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E I  + +VH+Y+ H+++   Q+        ++ IN N   +  F+ +D  + +Y+    
Sbjct: 210 EIIWNIHNVHIYDRHYDKLIKQVDGETFEPAKIKIN-NFKSIFDFKPDDIEVINYKYGEK 268

Query: 258 ILAKVSV 264
           I  ++++
Sbjct: 269 INYEIAI 275


>gi|255023190|ref|ZP_05295176.1| thymidylate synthase [Listeria monocytogenes FSL J1-208]
          Length = 87

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/84 (61%), Positives = 68/84 (80%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1  MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61 WFLRGDSNVSYLHRHGVSIWDEWA 84
          WFL GD+N+ YL +H  +IW+EWA
Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWA 84


>gi|257464160|ref|ZP_05628541.1| thymidylate synthase [Fusobacterium sp. D12]
 gi|317061676|ref|ZP_07926161.1| thymidylate synthase [Fusobacterium sp. D12]
 gi|313687352|gb|EFS24187.1| thymidylate synthase [Fusobacterium sp. D12]
          Length = 272

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 9/215 (4%)

Query: 20  DRTGVGTRSTFGYQMRFDLS--KGFPLLTTKKVHWKSVVHEL--LWFLRGDSNVSYLHRH 75
           D T    +   GYQ R D +  + F L+T++K  WKS + EL  +W+L+ + NV  L   
Sbjct: 31  DGTPAYYKQIVGYQFRLDNAGDEAF-LITSRKAAWKSSIRELYWIWYLQSN-NVDELVDL 88

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
           G   W+EW  +DG +G  YG Q            +Q+  ++  ++ +P SRR +   W  
Sbjct: 89  GCKFWNEWKQEDGTIGKAYGYQI---AKKTFQYQNQLDYVIGEIKNNPNSRRILTEIWIP 145

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
             +++MAL PC  L Q+ V NGKL  ++ QRS DV LG+  N+  Y +L  ++A      
Sbjct: 146 EELEQMALTPCVHLTQWTVLNGKLYLEVRQRSCDVALGLVANVFQYQVLHKLVARECHLS 205

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            G+ I T+ + H+Y+ H E    Q+  + R  P++
Sbjct: 206 CGDLIWTIHNAHIYDRHLEDLQKQVKETGREKPRL 240


>gi|301793850|emb|CBW36243.1| thymidylate synthase [Streptococcus pneumoniae INV104]
 gi|332204686|gb|EGJ18751.1| thymidylate synthase [Streptococcus pneumoniae GA47901]
          Length = 279

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP++T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFSEYDLSKGEFPIITLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ +++ L  +P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|327470119|gb|EGF15583.1| thymidylate synthase [Streptococcus sanguinis SK330]
          Length = 279

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I++I   +Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141

Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCYPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y P
Sbjct: 262 DLLDYNP 268


>gi|194396733|ref|YP_002037325.1| thymidylate synthase [Streptococcus pneumoniae G54]
 gi|194356400|gb|ACF54848.1| thymidylate synthase [Streptococcus pneumoniae G54]
          Length = 279

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 23/249 (9%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ + + L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLFKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMM 187
               ++   L PC   FQ   D  ++  ++Y      QRS D+ +    N   Y  L MM
Sbjct: 142 YQAFEETDGLLPC--AFQTMFDVRRIDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMM 199

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + E
Sbjct: 200 IAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAE 259

Query: 246 DFTLRSYEP 254
           DF L  Y+P
Sbjct: 260 DFELVDYDP 268


>gi|33152142|ref|NP_873495.1| thymidylate synthase [Haemophilus ducreyi 35000HP]
 gi|38372558|sp|Q7VMH2|TYSY_HAEDU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|33148364|gb|AAP95884.1| thymidylate synthase [Haemophilus ducreyi 35000HP]
          Length = 283

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G   +  RT     +     + +D++KG FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLDLCHRILNEGKWVKNKRTDKLCLTVINADLTYDVAKGEFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++ +            +G +YG   R +P  D 
Sbjct: 61  LLGYIRGYDNAADFRQLGTKSWDANANQNADWLANPYRKGVDDMGLVYGAIGRKFPKADH 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L     +R  I + ++        L PC     F + +G L     QR
Sbjct: 121 GSLDLLKQIVDDLSNGIDNRGEIYTFYHPGAFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A +   + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SADVPLGLNWNMVQCYTFLALMAQITNHKAGQVFHKIVNAHIYEDQLALMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P + INP I  L         +DF + +Y  H +I    S+
Sbjct: 241 ATPTLTINPAIKSLEDLEIWVTLDDFKVENYFYHPSIQYPFSI 283


>gi|327489635|gb|EGF21427.1| thymidylate synthase [Streptococcus sanguinis SK1058]
          Length = 279

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 130/256 (50%), Gaps = 23/256 (8%)

Query: 14  FGSDRRDRTGVG----TRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN 68
           F  + R R   G    ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN
Sbjct: 21  FSENARPRYKNGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSN 80

Query: 69  VSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYS 125
              L   ++ V  W++W   D G +G  YG   +       N+I++I   +Q L A+P++
Sbjct: 81  SLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWN 132

Query: 126 RRHIVSAWNVALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIAS 180
           RR+I+S W+    ++   L PC    +F     +G   L   L QRS D+ +    N   
Sbjct: 133 RRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQ 192

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVD 238
           Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +
Sbjct: 193 YVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTN 252

Query: 239 LLSFRYEDFTLRSYEP 254
               + EDF L  Y P
Sbjct: 253 FFDIKAEDFELLDYNP 268


>gi|331266063|ref|YP_004325693.1| thymidylate synthase [Streptococcus oralis Uo5]
 gi|326682735|emb|CBZ00352.1| thymidylate synthase [Streptococcus oralis Uo5]
          Length = 279

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I++ L  +P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEENPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               +    L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEATDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRKPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|289168310|ref|YP_003446579.1| thymidylate synthase [Streptococcus mitis B6]
 gi|288907877|emb|CBJ22717.1| thymidylate synthase [Streptococcus mitis B6]
          Length = 279

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D T   ++   G    +DL+KG FP+ T + +  KS + E+LW  +  SN +  L+ ++
Sbjct: 30  KDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLDVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ +++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    R +DF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDKTNFFDIRADDF 261

Query: 248 TLRSYEP 254
            L  Y P
Sbjct: 262 ELVDYNP 268


>gi|325689776|gb|EGD31780.1| thymidylate synthase [Streptococcus sanguinis SK115]
 gi|325696424|gb|EGD38314.1| thymidylate synthase [Streptococcus sanguinis SK160]
          Length = 279

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I++I   +Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
               Y+P
Sbjct: 262 EFLDYDP 268


>gi|71665293|ref|XP_819618.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi
           strain CL Brener]
 gi|70884927|gb|EAN97767.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma
           cruzi]
          Length = 118

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/116 (47%), Positives = 74/116 (63%)

Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           L QFYV NG+LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+
Sbjct: 3   LAQFYVSNGELSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHV 62

Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Y+NH E  + QL R PR  P ++       L  +   D  +  Y P+  I  K++V
Sbjct: 63  YSNHVEPCNEQLKRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 118


>gi|327460436|gb|EGF06773.1| thymidylate synthase [Streptococcus sanguinis SK1057]
          Length = 279

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I +I   +Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIIHKI---LQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLCREPSDCQPRLLLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELLDYDP 268


>gi|324991230|gb|EGC23164.1| thymidylate synthase [Streptococcus sanguinis SK353]
          Length = 296

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 47  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 106

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I++I   +Q L A+P++RR+I+S W+
Sbjct: 107 NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 158

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L +M+A
Sbjct: 159 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQIMIA 218

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 219 KHFGWKIGKFFYFINNLHIYDNQFEQAEELLCREPSDCHPRLVLNVPDGTNFFDIKAEDF 278

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 279 ELLDYDP 285


>gi|149005786|ref|ZP_01829525.1| thymidylate synthase [Streptococcus pneumoniae SP18-BS74]
 gi|307126865|ref|YP_003878896.1| thymidylate synthase [Streptococcus pneumoniae 670-6B]
 gi|147762726|gb|EDK69686.1| thymidylate synthase [Streptococcus pneumoniae SP18-BS74]
 gi|306483927|gb|ADM90796.1| thymidylate synthase [Streptococcus pneumoniae 670-6B]
 gi|332077096|gb|EGI87558.1| thymidylate synthase [Streptococcus pneumoniae GA17545]
          Length = 279

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ +++ L  +P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLIQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|148985252|ref|ZP_01818475.1| thymidylate synthase [Streptococcus pneumoniae SP3-BS71]
 gi|168487239|ref|ZP_02711747.1| thymidylate synthase [Streptococcus pneumoniae CDC1087-00]
 gi|221231485|ref|YP_002510637.1| thymidylate synthase [Streptococcus pneumoniae ATCC 700669]
 gi|225854195|ref|YP_002735707.1| thymidylate synthase [Streptococcus pneumoniae JJA]
 gi|254790251|sp|B8ZMQ1|TYSY_STRPJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790252|sp|C1CD36|TYSY_STRZJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|147922450|gb|EDK73569.1| thymidylate synthase [Streptococcus pneumoniae SP3-BS71]
 gi|183569880|gb|EDT90408.1| thymidylate synthase [Streptococcus pneumoniae CDC1087-00]
 gi|220673945|emb|CAR68454.1| thymidylate synthase [Streptococcus pneumoniae ATCC 700669]
 gi|225722869|gb|ACO18722.1| thymidylate synthase [Streptococcus pneumoniae JJA]
 gi|301799707|emb|CBW32272.1| thymidylate synthase [Streptococcus pneumoniae OXC141]
          Length = 279

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ +++ L  +P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|332361331|gb|EGJ39135.1| thymidylate synthase [Streptococcus sanguinis SK1056]
          Length = 279

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I++I   +Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIINKI---LQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N F+QA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKIGKFFYFINNLHIYDNQFKQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 DLLDYDP 268


>gi|182683595|ref|YP_001835342.1| thymidylate synthase [Streptococcus pneumoniae CGSP14]
 gi|303254749|ref|ZP_07340850.1| thymidylate synthase [Streptococcus pneumoniae BS455]
 gi|303259941|ref|ZP_07345915.1| thymidylate synthase [Streptococcus pneumoniae SP-BS293]
 gi|303261347|ref|ZP_07347295.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS292]
 gi|303264013|ref|ZP_07349934.1| thymidylate synthase [Streptococcus pneumoniae BS397]
 gi|303266327|ref|ZP_07352217.1| thymidylate synthase [Streptococcus pneumoniae BS457]
 gi|303268794|ref|ZP_07354582.1| thymidylate synthase [Streptococcus pneumoniae BS458]
 gi|182628929|gb|ACB89877.1| thymidylate synthase [Streptococcus pneumoniae CGSP14]
 gi|301801532|emb|CBW34224.1| thymidylate synthase [Streptococcus pneumoniae INV200]
 gi|302598289|gb|EFL65334.1| thymidylate synthase [Streptococcus pneumoniae BS455]
 gi|302637481|gb|EFL67968.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS292]
 gi|302638860|gb|EFL69321.1| thymidylate synthase [Streptococcus pneumoniae SP-BS293]
 gi|302641659|gb|EFL72018.1| thymidylate synthase [Streptococcus pneumoniae BS458]
 gi|302644138|gb|EFL74395.1| thymidylate synthase [Streptococcus pneumoniae BS457]
 gi|302646418|gb|EFL76644.1| thymidylate synthase [Streptococcus pneumoniae BS397]
          Length = 279

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ +++ L  +P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRIDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|15900570|ref|NP_345174.1| thymidylate synthase [Streptococcus pneumoniae TIGR4]
 gi|15902629|ref|NP_358179.1| thymidylate synthase [Streptococcus pneumoniae R6]
 gi|111658670|ref|ZP_01409313.1| hypothetical protein SpneT_02000176 [Streptococcus pneumoniae
           TIGR4]
 gi|116516193|ref|YP_816080.1| thymidylate synthase [Streptococcus pneumoniae D39]
 gi|148992222|ref|ZP_01821945.1| thymidylate synthase [Streptococcus pneumoniae SP9-BS68]
 gi|148997250|ref|ZP_01824904.1| thymidylate synthase [Streptococcus pneumoniae SP11-BS70]
 gi|149002362|ref|ZP_01827304.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS69]
 gi|149010709|ref|ZP_01832080.1| thymidylate synthase [Streptococcus pneumoniae SP19-BS75]
 gi|149020283|ref|ZP_01835175.1| thymidylate synthase [Streptococcus pneumoniae SP23-BS72]
 gi|168482897|ref|ZP_02707849.1| thymidylate synthase [Streptococcus pneumoniae CDC1873-00]
 gi|168488350|ref|ZP_02712549.1| thymidylate synthase [Streptococcus pneumoniae SP195]
 gi|168492256|ref|ZP_02716399.1| thymidylate synthase [Streptococcus pneumoniae CDC0288-04]
 gi|168492827|ref|ZP_02716970.1| thymidylate synthase [Streptococcus pneumoniae CDC3059-06]
 gi|168575339|ref|ZP_02721275.1| thymidylate synthase [Streptococcus pneumoniae MLV-016]
 gi|169833725|ref|YP_001694142.1| thymidylate synthase [Streptococcus pneumoniae Hungary19A-6]
 gi|225856362|ref|YP_002737873.1| thymidylate synthase [Streptococcus pneumoniae P1031]
 gi|225858497|ref|YP_002740007.1| thymidylate synthase [Streptococcus pneumoniae 70585]
 gi|225860660|ref|YP_002742169.1| thymidylate synthase [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650310|ref|ZP_04524562.1| thymidylate synthase [Streptococcus pneumoniae CCRI 1974]
 gi|237821973|ref|ZP_04597818.1| thymidylate synthase [Streptococcus pneumoniae CCRI 1974M2]
 gi|298229819|ref|ZP_06963500.1| thymidylate synthase [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254801|ref|ZP_06978387.1| thymidylate synthase [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502463|ref|YP_003724403.1| thymidylate synthase [Streptococcus pneumoniae TCH8431/19A]
 gi|307067287|ref|YP_003876253.1| thymidylate synthase [Streptococcus pneumoniae AP200]
 gi|54039799|sp|P67050|TYSY_STRR6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54042284|sp|P67049|TYSY_STRPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|122279034|sp|Q04LL8|TYSY_STRP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790250|sp|C1C631|TYSY_STRP7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790253|sp|C1CJD5|TYSY_STRZP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790254|sp|C1CQE7|TYSY_STRZT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|14972144|gb|AAK74814.1| thymidylate synthase [Streptococcus pneumoniae TIGR4]
 gi|15458166|gb|AAK99389.1| Thymidylate synthase [Streptococcus pneumoniae R6]
 gi|116076769|gb|ABJ54489.1| thymidylate synthase [Streptococcus pneumoniae D39]
 gi|147756950|gb|EDK63990.1| thymidylate synthase [Streptococcus pneumoniae SP11-BS70]
 gi|147759677|gb|EDK66668.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS69]
 gi|147765190|gb|EDK72119.1| thymidylate synthase [Streptococcus pneumoniae SP19-BS75]
 gi|147928848|gb|EDK79860.1| thymidylate synthase [Streptococcus pneumoniae SP9-BS68]
 gi|147930585|gb|EDK81567.1| thymidylate synthase [Streptococcus pneumoniae SP23-BS72]
 gi|168996227|gb|ACA36839.1| thymidylate synthase [Streptococcus pneumoniae Hungary19A-6]
 gi|172043796|gb|EDT51842.1| thymidylate synthase [Streptococcus pneumoniae CDC1873-00]
 gi|183573208|gb|EDT93736.1| thymidylate synthase [Streptococcus pneumoniae SP195]
 gi|183573554|gb|EDT94082.1| thymidylate synthase [Streptococcus pneumoniae CDC0288-04]
 gi|183576820|gb|EDT97348.1| thymidylate synthase [Streptococcus pneumoniae CDC3059-06]
 gi|183578413|gb|EDT98941.1| thymidylate synthase [Streptococcus pneumoniae MLV-016]
 gi|225721852|gb|ACO17706.1| thymidylate synthase [Streptococcus pneumoniae 70585]
 gi|225726198|gb|ACO22050.1| thymidylate synthase [Streptococcus pneumoniae P1031]
 gi|225726770|gb|ACO22621.1| thymidylate synthase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238058|gb|ADI69189.1| thymidylate synthase [Streptococcus pneumoniae TCH8431/19A]
 gi|306408824|gb|ADM84251.1| Thymidylate synthase [Streptococcus pneumoniae AP200]
 gi|327390399|gb|EGE88740.1| thymidylate synthase [Streptococcus pneumoniae GA04375]
 gi|332074474|gb|EGI84950.1| thymidylate synthase [Streptococcus pneumoniae GA17570]
 gi|332075963|gb|EGI86429.1| thymidylate synthase [Streptococcus pneumoniae GA41301]
 gi|332202546|gb|EGJ16615.1| thymidylate synthase [Streptococcus pneumoniae GA41317]
 gi|332203827|gb|EGJ17894.1| thymidylate synthase [Streptococcus pneumoniae GA47368]
          Length = 279

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ +++ L  +P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|262282289|ref|ZP_06060057.1| thymidylate synthase [Streptococcus sp. 2_1_36FAA]
 gi|262261580|gb|EEY80278.1| thymidylate synthase [Streptococcus sp. 2_1_36FAA]
          Length = 279

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W     G +G  YG   +          D I  I+Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGATGTIGQRYGAVVKKH--------DIIHIILQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELLDYDP 268


>gi|317062887|ref|ZP_07927372.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185]
 gi|313688563|gb|EFS25398.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185]
          Length = 276

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 20/254 (7%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77
           D T    +S  GYQ R D S     L+TT+    K+ + EL W     SN V  L++   
Sbjct: 34  DGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPSKAPIRELYWIWIMQSNDVDELNKLKC 93

Query: 78  SIWDEWADKDGELGPIYGVQ-------WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
             WDEW  +DG +G  YG Q       +RS  DY          +V+ L+ +P SRR + 
Sbjct: 94  KFWDEWKMEDGTIGKAYGYQIAKQTFGYRSQLDY----------VVEELKKNPNSRRIMT 143

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
             W    +DKMAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A 
Sbjct: 144 EIWVPEDLDKMALTPCVHLTQWSVIGSKLYLEVRQRSCDVALGLVANVFQYSILHKLVAM 203

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G +  E I  + +VH+Y+ H  +   Q+ R P      +   N   +  F+ +D  + 
Sbjct: 204 ECGLEPAEIIWNIHNVHIYDRHMPELLEQIKR-PSINGATVKIENFKSIYDFKPDDIVVE 262

Query: 251 SYEPHAAILAKVSV 264
           +Y+    I  +V++
Sbjct: 263 TYQYGDKISYEVAI 276


>gi|257468630|ref|ZP_05632724.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185]
          Length = 274

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 20/254 (7%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77
           D T    +S  GYQ R D S     L+TT+    K+ + EL W     SN V  L++   
Sbjct: 32  DGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPSKAPIRELYWIWIMQSNDVDELNKLKC 91

Query: 78  SIWDEWADKDGELGPIYGVQ-------WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
             WDEW  +DG +G  YG Q       +RS  DY          +V+ L+ +P SRR + 
Sbjct: 92  KFWDEWKMEDGTIGKAYGYQIAKQTFGYRSQLDY----------VVEELKKNPNSRRIMT 141

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
             W    +DKMAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A 
Sbjct: 142 EIWVPEDLDKMALTPCVHLTQWSVIGSKLYLEVRQRSCDVALGLVANVFQYSILHKLVAM 201

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G +  E I  + +VH+Y+ H  +   Q+ R P      +   N   +  F+ +D  + 
Sbjct: 202 ECGLEPAEIIWNIHNVHIYDRHMPELLEQIKR-PSINGATVKIENFKSIYDFKPDDIVVE 260

Query: 251 SYEPHAAILAKVSV 264
           +Y+    I  +V++
Sbjct: 261 TYQYGDKISYEVAI 274


>gi|323351648|ref|ZP_08087302.1| thymidylate synthase [Streptococcus sanguinis VMC66]
 gi|322122134|gb|EFX93860.1| thymidylate synthase [Streptococcus sanguinis VMC66]
          Length = 279

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFTEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I +I   +Q L A+P++RR+I+S W+
Sbjct: 90  HVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIIHKI---LQQLEANPWNRRNIISLWD 141

Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y P
Sbjct: 262 ELLDYNP 268


>gi|270292276|ref|ZP_06198490.1| thymidylate synthase [Streptococcus sp. M143]
 gi|270279322|gb|EFA25165.1| thymidylate synthase [Streptococcus sp. M143]
          Length = 279

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DL+ G FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFAEYDLAMGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNSKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKIGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y P
Sbjct: 262 ELVDYNP 268


>gi|148989041|ref|ZP_01820441.1| thymidylate synthase [Streptococcus pneumoniae SP6-BS73]
 gi|147925538|gb|EDK76615.1| thymidylate synthase [Streptococcus pneumoniae SP6-BS73]
          Length = 279

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ +++ L  +P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLLKQLETNPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+       + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRLVLNVPDGTSFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|291529718|emb|CBK95304.1| Thymidylate synthase [Eubacterium rectale M104/1]
          Length = 290

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 21/231 (9%)

Query: 35  RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGP 92
           ++DLSKG  P+ T + + WKS V E+LW  +  SN ++ LH  G+  WD+W   DG +G 
Sbjct: 50  QYDLSKGECPVETLRPIAWKSAVKEILWIYQMQSNKINDLHEMGIKYWDDWDIGDGTIGC 109

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW-------NVALIDKMALPP 145
            YG   +          + ++ ++  L+ DP+ RRHI++ W             K   P 
Sbjct: 110 RYGATVKRH--------NLMNKLLNGLKQDPFGRRHIMNMWQEDDFSDETGGTTKGLNPC 161

Query: 146 CHCLF---QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           C+      ++  D   L   + QRS D  +    N   Y  L +M+A V GF+ G F H 
Sbjct: 162 CYETIWNVRWGEDGLYLDMLMNQRSSDYEISCAINELQYIALQLMVAKVCGFKPGMFTHV 221

Query: 203 LGDVHLYNNHFEQADLQLSR-SPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           + +V +Y+ H       L+R S R  PQ+I+N +  D   F  +DF L  Y
Sbjct: 222 IENVQIYDRHVNNVKTLLTRESVRCCPQLILNTDKTDFYKFTIDDFVLTDY 272


>gi|124262681|ref|YP_001023151.1| thymidylate synthase [Methylibium petroleiphilum PM1]
 gi|124261927|gb|ABM96916.1| thymidylate synthase [Methylibium petroleiphilum PM1]
          Length = 316

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 48/286 (16%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q+ D+L+H++  GS + + RTG       GY +RFD++ GFP +TTK++ +K    EL
Sbjct: 1   MQQFHDMLQHILDHGSRQLNARTGEEVLFVPGYTLRFDMADGFPAITTKQLFFKMAKGEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDGN 107
             F RG ++ +     G ++W++ A+K            + +LG    +QW  W D+   
Sbjct: 61  FGFFRGFTSAAQFREIGCTVWNDNANKTKAWLANPYRQGEDDLGRFGYLQWTDWRDWREA 120

Query: 108 V------------------------------IDQISSIVQSLRADPYSRRHIVSAWNVAL 137
                                          I+Q+ + + ++  +P  R  I+S WN A 
Sbjct: 121 TTPAQRDEMLAQGYEVRAHDAERGVWILRRSINQLETSLHAVMTNPSDRGIILSGWNPAE 180

Query: 138 IDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
           ID+ AL  CH  +   VD   G L   L+QRS D  L   +N+A  ++   ++A + G +
Sbjct: 181 IDQGALRSCHVSYMLQVDVATGTLHLTLWQRSFDAPLA--YNVAIGAMYLEIMARLAGLK 238

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
            G F H + D H+Y  H       L+R     P + +  NI  L S
Sbjct: 239 AGTFTHFISDAHIYAKHIPGVKEMLAREHFPQPTLDLG-NIPTLTS 283


>gi|315613465|ref|ZP_07888373.1| thymidylate synthase [Streptococcus sanguinis ATCC 49296]
 gi|315314461|gb|EFU62505.1| thymidylate synthase [Streptococcus sanguinis ATCC 49296]
          Length = 279

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D T   ++   G    +DLSK  FP+ T + +  KS + E+LW  +  SN +  L+ ++
Sbjct: 30  KDGTVANSKYVTGAFAEYDLSKEEFPITTLRPIAIKSAIKEVLWIYQDQSNSLDVLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +          D I+ I++ L  +P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKILKQLETNPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLGREPSNCQPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|306833692|ref|ZP_07466819.1| thymidylate synthase [Streptococcus bovis ATCC 700338]
 gi|304424462|gb|EFM27601.1| thymidylate synthase [Streptococcus bovis ATCC 700338]
          Length = 303

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 126/244 (51%), Gaps = 23/244 (9%)

Query: 24  VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIW 80
             ++   G    +DLSKG FP+ T + +  KS + E+ W  +  +N +S L+ ++ V  W
Sbjct: 59  ANSKYVTGVFAEYDLSKGEFPITTLRPIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYW 118

Query: 81  DEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALI 138
           ++W  D  G +G  YG   +          D I  I++ L  +P++RR+++S W+  A  
Sbjct: 119 NDWEVDNSGTIGERYGAVVKKH--------DIIRKILKQLEENPWNRRNVISLWDYEAFE 170

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMMLASVI 192
           +   L PC   FQ   D  ++  ++Y      QRS D+ +    N   Y  L MM+A   
Sbjct: 171 NTDGLLPC--AFQTMYDVRRVDGEIYLDATLTQRSNDMLVSHHINAMQYVALQMMIAKHF 228

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSR-SPRTLPQMIIN-PNIVDLLSFRYEDFTLR 250
           G++ G+F + + ++H+Y+N FEQA   LSR S    P++++N P+  D    + EDF L 
Sbjct: 229 GWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRLVLNVPDGTDFFDIKPEDFELV 288

Query: 251 SYEP 254
            YEP
Sbjct: 289 DYEP 292


>gi|288905459|ref|YP_003430681.1| thymidylate synthase [Streptococcus gallolyticus UCN34]
 gi|306831541|ref|ZP_07464699.1| thymidylate synthase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|288732185|emb|CBI13750.1| thymidylate synthase [Streptococcus gallolyticus UCN34]
 gi|304426326|gb|EFM29440.1| thymidylate synthase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 279

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 126/244 (51%), Gaps = 23/244 (9%)

Query: 24  VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIW 80
             ++   G    +DLSKG FP+ T + +  KS + E+ W  +  +N +S L+ ++ V  W
Sbjct: 35  ANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYW 94

Query: 81  DEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALI 138
           ++W  D  G +G  YG   +          D I  I++ L  +P++RR+++S W+  A  
Sbjct: 95  NDWEVDNSGTIGERYGAVVKKH--------DIIRKILKQLEENPWNRRNVISLWDYEAFE 146

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMMLASVI 192
           +   L PC   FQ   D  ++  ++Y      QRS D+ +    N   Y  L MM+A   
Sbjct: 147 NTDGLLPC--AFQTMYDVRRVDGEIYLDATLTQRSNDMLVSHHINAMQYVALQMMIAKHF 204

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSR-SPRTLPQMIIN-PNIVDLLSFRYEDFTLR 250
           G++ G+F + + ++H+Y+N FEQA   LSR S    P++++N P+  D    + EDF L 
Sbjct: 205 GWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRLVLNVPDGTDFFDIKPEDFELV 264

Query: 251 SYEP 254
            YEP
Sbjct: 265 DYEP 268


>gi|312866637|ref|ZP_07726851.1| thymidylate synthase [Streptococcus parasanguinis F0405]
 gi|311097718|gb|EFQ55948.1| thymidylate synthase [Streptococcus parasanguinis F0405]
          Length = 279

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 127/251 (50%), Gaps = 27/251 (10%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G  M FDLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGRTANSKYITGAFMEFDLSKGEFPITTLRPIAIKSAIKEMLWIYQDQSNSLDLLEDKY 89

Query: 76  GVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D   +G  YG   +          D  + I++ L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDSRTIGQRYGAVVKKH--------DITNKILKQLEANPWNRRNIISLWD 141

Query: 135 V-ALIDKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMM 187
             A  +   L PC   FQ   D  ++  ++Y      QRS D+ +    N   Y  L MM
Sbjct: 142 YDAFEETEGLLPC--AFQTMFDVRRVDEEIYLDATLTQRSNDMLVAHHINAMQYVALQMM 199

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIINPNIVDLLSF---R 243
           +A   G++ G+F + + ++H+Y+N FEQA+  L R P    P +++  N+ D  SF   +
Sbjct: 200 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPHLVL--NVADGTSFFDIK 257

Query: 244 YEDFTLRSYEP 254
            EDF L  Y+P
Sbjct: 258 PEDFELVDYDP 268


>gi|25011427|ref|NP_735822.1| thymidylate synthase [Streptococcus agalactiae NEM316]
 gi|76787961|ref|YP_329956.1| thymidylate synthase [Streptococcus agalactiae A909]
 gi|77411173|ref|ZP_00787525.1| thymidylate synthase [Streptococcus agalactiae CJB111]
 gi|77414071|ref|ZP_00790240.1| thymidylate synthase [Streptococcus agalactiae 515]
 gi|62901376|sp|Q8E4L6|TYSY_STRA3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123601631|sp|Q3K0J7|TYSY_STRA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|24412965|emb|CAD47044.1| thymidylate synthase [Streptococcus agalactiae NEM316]
 gi|76563018|gb|ABA45602.1| thymidylate synthase [Streptococcus agalactiae A909]
 gi|77159869|gb|EAO71011.1| thymidylate synthase [Streptococcus agalactiae 515]
 gi|77162791|gb|EAO73750.1| thymidylate synthase [Streptococcus agalactiae CJB111]
          Length = 279

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 122/235 (51%), Gaps = 19/235 (8%)

Query: 31  GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN--VSYLHRHGVSIWDEW-ADK 86
           G    +DLSKG FP+ T + +  KS + E+ W  +  +N  V    ++GV+ W++W    
Sbjct: 42  GAFAEYDLSKGEFPITTLRPIPIKSAIKEIFWIYQDQTNDLVVLNDKYGVTYWNDWEVGH 101

Query: 87  DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALIDKMALPP 145
            G +G  YG   +       N+I   S +++ L  +P++RR+++S W+  A  +   L P
Sbjct: 102 TGTIGQRYGAVVKK-----HNII---SKLLKQLEDNPWNRRNVISLWDYEAFEETEGLLP 153

Query: 146 C--HCLFQFYVDNGKL--SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
           C    +F     NG+L     L QRS D+ +    N   Y  L MM+A   G++ G+F +
Sbjct: 154 CAFQTMFDVRRVNGELYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWRVGKFFY 213

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDFTLRSYEP 254
            + ++H+Y+N FEQA   L R P    P++++N P+  D    + +DF L  Y+P
Sbjct: 214 FINNLHIYDNQFEQAQELLKRQPSECNPKLVLNVPDGTDFFDIKPDDFALVDYDP 268


>gi|325978449|ref|YP_004288165.1| thymidylate synthase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325178377|emb|CBZ48421.1| thyA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 279

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 123/242 (50%), Gaps = 19/242 (7%)

Query: 24  VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIW 80
             ++   G    +DLSKG FP+ T + +  KS + E+ W  +  +N +S L+ ++ V  W
Sbjct: 35  ANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYW 94

Query: 81  DEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALI 138
           ++W  D  G +G  YG   +          D I  I++ L  +P++RR+++S W+  A  
Sbjct: 95  NDWEVDNSGTIGERYGAVVKKH--------DIIRKILKQLEENPWNRRNVISLWDYEAFE 146

Query: 139 DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
           +   L PC     + V    D   L   L QRS D+ +    N   Y  L MM+A   G+
Sbjct: 147 NTDGLLPCAFQTMYDVRRVDDEIYLDATLTQRSNDMLVSHHINAMQYVALQMMIAKHFGW 206

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSR-SPRTLPQMIIN-PNIVDLLSFRYEDFTLRSY 252
           + G+F + + ++H+Y+N FEQA   LSR S    P++++N P+  D    + EDF L  Y
Sbjct: 207 KVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRLVLNVPDGTDFFDIKPEDFELVDY 266

Query: 253 EP 254
           EP
Sbjct: 267 EP 268


>gi|325694584|gb|EGD36493.1| thymidylate synthase [Streptococcus sanguinis SK150]
          Length = 279

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D   +G  YG   +       N+I +I   +Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTCTIGQRYGAVVKK-----HNIIHKI---LQQLEANPWNRRNIISLWD 141

Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELLDYDP 268


>gi|332366635|gb|EGJ44378.1| thymidylate synthase [Streptococcus sanguinis SK1059]
          Length = 279

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN   L   ++
Sbjct: 30  KDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKY 89

Query: 76  GVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D G +G  YG   +       N+I +I   +Q L A+P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGDTGTIGQRYGAVVKK-----HNIIHKI---LQQLEANPWNRRNIISLWD 141

Query: 135 VALIDKM-ALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
               ++   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N  +  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVSDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELLDYDP 268


>gi|322372507|ref|ZP_08047043.1| thymidylate synthase [Streptococcus sp. C150]
 gi|321277549|gb|EFX54618.1| thymidylate synthase [Streptococcus sp. C150]
          Length = 286

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 128/249 (51%), Gaps = 16/249 (6%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+ W  +  +N +  L  ++
Sbjct: 30  KDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W++W  +D    P      RS     G V+   D I+ ++  L A+P++RR+++S 
Sbjct: 90  NVHYWNDWEVEDV---PANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146

Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+    ++ A L PC     F V    ++  L   L QRS D+ +    N   Y  L MM
Sbjct: 147 WDYEAFEETAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSNDMLVAHHINAMQYVALQMM 206

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++I+N P+  +    + E
Sbjct: 207 IAKHFGWKVGKFFYFVNNLHVYDNQFEQAEELLKRQPSDCQPRLILNVPDGTNFFDIKPE 266

Query: 246 DFTLRSYEP 254
           DF L  Y+P
Sbjct: 267 DFELVDYDP 275


>gi|55822548|ref|YP_140989.1| thymidylate synthase [Streptococcus thermophilus CNRZ1066]
 gi|62901188|sp|Q5M0S7|TYSY_STRT1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|55738533|gb|AAV62174.1| thymidylate synthase [Streptococcus thermophilus CNRZ1066]
          Length = 286

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 16/249 (6%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+ W  +  +N +  L  ++
Sbjct: 30  KDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W++W   + E  P      RS     G V+   D I+ ++  L A+P++RR+++S 
Sbjct: 90  NVHYWNDW---EVEGVPANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146

Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+    ++ A L PC     F V    ++  L   L QRS D+ +    N   Y  L MM
Sbjct: 147 WDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSNDMLVAHHINAMQYVALQMM 206

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + E
Sbjct: 207 IAKHFGWKIGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLVLNVPDETNFFDIKPE 266

Query: 246 DFTLRSYEP 254
           DF L  Y+P
Sbjct: 267 DFELVDYDP 275


>gi|125623803|ref|YP_001032286.1| thymidylate synthase [Lactococcus lactis subsp. cremoris MG1363]
 gi|18539502|gb|AAL74419.1|AF462070_1 thymidylate synthase [Lactococcus lactis subsp. cremoris MG1363]
 gi|149513|gb|AAA25221.1| thymidylate synthase (EC 2.1.1.45) [Lactococcus lactis]
 gi|124492611|emb|CAL97556.1| ThyA protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070573|gb|ADJ59973.1| thymidylate synthase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 279

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD-SNVSYLH-RH 75
           +D     ++   G  + +DL KG FP+ T + +  KS + EL+W  +   S +S L  ++
Sbjct: 30  KDGQMANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKELMWIYQDQTSELSVLEEKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
           GV  W EW   DG +G  YG   + +        + I  +++ L  +P++RR+I++ W  
Sbjct: 90  GVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLEGLAKNPWNRRNIINLWQY 141

Query: 136 ALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
              ++   L PC     F V   K     L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 EDFEETEGLLPCAFQTMFDVRREKDGQIYLDATLIQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247
               ++ G+F + + ++H+Y+N FEQA+  + R+     P++++N P+  +    + EDF
Sbjct: 202 KHFSWKVGKFFYFVNNLHIYDNQFEQANELMKRTASEKEPRLVLNVPDGTNFFDIKPEDF 261

Query: 248 TLRSYEP 254
            L  YEP
Sbjct: 262 ELVDYEP 268


>gi|116627466|ref|YP_820085.1| thymidylate synthase [Streptococcus thermophilus LMD-9]
 gi|122267936|sp|Q03LN3|TYSY_STRTD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116100743|gb|ABJ65889.1| thymidylate synthase [Streptococcus thermophilus LMD-9]
 gi|312277984|gb|ADQ62641.1| Thymidylate synthase [Streptococcus thermophilus ND03]
          Length = 286

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 16/249 (6%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+ W  +  +N +  L  ++
Sbjct: 30  KDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W++W   + E  P      RS     G V+   D I+ ++  L A+P++RR+++S 
Sbjct: 90  NVHYWNDW---EVEGVPANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146

Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+    ++ A L PC     F V    ++  L   L QRS D+ +    N   Y  L MM
Sbjct: 147 WDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSNDMLVAHHINAMQYVALQMM 206

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + E
Sbjct: 207 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLVLNVPDETNFFDIKPE 266

Query: 246 DFTLRSYEP 254
           DF L  Y+P
Sbjct: 267 DFELVDYDP 275


>gi|22537462|ref|NP_688313.1| thymidylate synthase [Streptococcus agalactiae 2603V/R]
 gi|76798605|ref|ZP_00780833.1| thymidylate synthase [Streptococcus agalactiae 18RS21]
 gi|77409178|ref|ZP_00785890.1| thymidylate synthase [Streptococcus agalactiae COH1]
 gi|62901375|sp|Q8DZ07|TYSY_STRA5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|22534340|gb|AAN00186.1|AE014252_9 thymidylate synthase [Streptococcus agalactiae 2603V/R]
 gi|76586039|gb|EAO62569.1| thymidylate synthase [Streptococcus agalactiae 18RS21]
 gi|77172224|gb|EAO75381.1| thymidylate synthase [Streptococcus agalactiae COH1]
 gi|319745294|gb|EFV97612.1| thymidylate synthase [Streptococcus agalactiae ATCC 13813]
          Length = 279

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 125/235 (53%), Gaps = 19/235 (8%)

Query: 31  GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIWDEW-ADK 86
           G    +DLSKG FP+ T + +  KS + E+ W  +  +N ++ L+ ++GV+ W++W    
Sbjct: 42  GAFAEYDLSKGEFPITTLRPIPIKSAIKEIFWIYQDQTNDLAVLNDKYGVTYWNDWEVGH 101

Query: 87  DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALIDKMALPP 145
            G +G  YG   +       N+I   S +++ L  +P++RR+++S W+  A  +   L P
Sbjct: 102 TGTIGQRYGAVVKK-----HNII---SKLLKQLEDNPWNRRNVISLWDYEAFEETEGLLP 153

Query: 146 C--HCLFQFYVDNGKL--SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
           C    +F     NG+L     L QRS D+ +    N   Y  L MM+A   G++ G+F +
Sbjct: 154 CAFQTMFDVRRVNGELYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWRVGKFFY 213

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDFTLRSYEP 254
            + ++H+Y+N FEQA   L R P    P++++N P+  D    + +DF L  Y+P
Sbjct: 214 FINNLHIYDNQFEQAQELLKRQPSECNPKLVLNVPDGTDFFDIKPDDFALVDYDP 268


>gi|15674907|ref|NP_269081.1| thymidylate synthase [Streptococcus pyogenes M1 GAS]
 gi|28896164|ref|NP_802514.1| thymidylate synthase [Streptococcus pyogenes SSI-1]
 gi|71910501|ref|YP_282051.1| thymidylate synthase [Streptococcus pyogenes MGAS5005]
 gi|161485748|ref|NP_664405.2| thymidylate synthase [Streptococcus pyogenes MGAS315]
 gi|54039800|sp|P67052|TYSY_STRP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54042285|sp|P67051|TYSY_STRP1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|13622048|gb|AAK33802.1| putative thymidylate synthase [Streptococcus pyogenes M1 GAS]
 gi|28811414|dbj|BAC64347.1| putative thymidylate synthase [Streptococcus pyogenes SSI-1]
 gi|71853283|gb|AAZ51306.1| thymidylate synthase [Streptococcus pyogenes MGAS5005]
          Length = 279

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G    +DL+KG FP+ T + +  KS + EL W  +  SN +  L  ++
Sbjct: 30  KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 89

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W+EW  D+   +G  YG   +          D IS I++ L  +P++RR+++S W+
Sbjct: 90  NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 141

Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC     F V    ++  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N F+QA   L R P  + P++++N P+  +    + +DF
Sbjct: 202 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDRTNFFDIKPDDF 261

Query: 248 TLRSYEP 254
            L++Y+P
Sbjct: 262 ELQNYDP 268


>gi|312863183|ref|ZP_07723421.1| thymidylate synthase [Streptococcus vestibularis F0396]
 gi|322517189|ref|ZP_08070072.1| thymidylate synthase [Streptococcus vestibularis ATCC 49124]
 gi|311100719|gb|EFQ58924.1| thymidylate synthase [Streptococcus vestibularis F0396]
 gi|322124248|gb|EFX95764.1| thymidylate synthase [Streptococcus vestibularis ATCC 49124]
          Length = 286

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 16/249 (6%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D T   ++   G    +DLS+G FP+ T + +  KS + E+ W  +  +N +  L  ++
Sbjct: 30  KDGTTANSKYITGAFAEYDLSRGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W++W  +D    P      RS     G V+   D I+ ++  L A+P++RR+++S 
Sbjct: 90  NVHYWNDWEVEDV---PANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146

Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+    ++ A L PC     F V    ++  L   L QRS D+ +    N   Y  L MM
Sbjct: 147 WDYEAFEETAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSNDMLVAHHINAMQYVALQMM 206

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++I+N P+  +    + E
Sbjct: 207 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLILNVPDGTNFFDIKPE 266

Query: 246 DFTLRSYEP 254
           DF L  Y+P
Sbjct: 267 DFELVDYDP 275


>gi|21904330|gb|AAM79208.1| putative thymidylate synthase [Streptococcus pyogenes MGAS315]
          Length = 287

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G    +DL+KG FP+ T + +  KS + EL W  +  SN +  L  ++
Sbjct: 38  KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 97

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W+EW  D+   +G  YG   +          D IS I++ L  +P++RR+++S W+
Sbjct: 98  NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 149

Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC     F V    ++  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 150 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMIA 209

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N F+QA   L R P  + P++++N P+  +    + +DF
Sbjct: 210 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDRTNFFDIKPDDF 269

Query: 248 TLRSYEP 254
            L++Y+P
Sbjct: 270 ELQNYDP 276


>gi|306827521|ref|ZP_07460804.1| thymidylate synthase [Streptococcus pyogenes ATCC 10782]
 gi|304430319|gb|EFM33345.1| thymidylate synthase [Streptococcus pyogenes ATCC 10782]
          Length = 287

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G    +DL+KG FP+ T + +  KS + EL W  +  SN +  L  ++
Sbjct: 38  KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 97

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W+EW  D+   +G  YG   +          D IS I++ L  +P++RR+++S W+
Sbjct: 98  NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 149

Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC     F V    ++  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 150 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMIA 209

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N F+QA   L R P  + P++++N P+  +    + +DF
Sbjct: 210 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDRTNFFDIKPDDF 269

Query: 248 TLRSYEP 254
            L++Y+P
Sbjct: 270 ELQNYDP 276


>gi|218185748|gb|EEC68175.1| hypothetical protein OsI_36122 [Oryza sativa Indica Group]
          Length = 404

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 12/110 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL+L+  +I+ G+ + DRTG GT S FG QMRF+L   FPLLTTKKV W+ VV ELLW
Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWR 99
           F+ G ++   L   G+ IWD     E+ D       ++G+LGP+YG QWR
Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWR 348


>gi|19745950|ref|NP_607086.1| thymidylate synthase [Streptococcus pyogenes MGAS8232]
 gi|139473953|ref|YP_001128669.1| thymidylate synthase [Streptococcus pyogenes str. Manfredo]
 gi|161761315|ref|YP_060023.2| thymidylate synthase [Streptococcus pyogenes MGAS10394]
 gi|162139405|ref|YP_280136.2| thymidylate synthase [Streptococcus pyogenes MGAS6180]
 gi|209559235|ref|YP_002285707.1| thymidylate synthase [Streptococcus pyogenes NZ131]
 gi|25091466|sp|Q8P1D1|TYSY_STRP8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901240|sp|Q5XCM3|TYSY_STRP6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231738|sp|A2RF20|TYSY_STRPG RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172046110|sp|Q48U25|TYSY_STRPM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172046224|sp|Q1JHC5|TYSY_STRPD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172046751|sp|Q1J744|TYSY_STRPF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|19748109|gb|AAL97585.1| putative thymidylate synthase [Streptococcus pyogenes MGAS8232]
 gi|134272200|emb|CAM30446.1| thymidylate synthase [Streptococcus pyogenes str. Manfredo]
 gi|209540436|gb|ACI61012.1| Thymidylate synthase [Streptococcus pyogenes NZ131]
          Length = 279

 Score =  112 bits (280), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G    +DL+KG FP+ T + +  KS + EL W  +  SN +  L  ++
Sbjct: 30  KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 89

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W+EW  D+   +G  YG   +          D IS I++ L  +P++RR+++S W+
Sbjct: 90  NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 141

Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC     F V    ++  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N F+QA   L R P  + P++++N P+  +    + +DF
Sbjct: 202 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDGTNFFDIKPDDF 261

Query: 248 TLRSYEP 254
            L++Y+P
Sbjct: 262 ELQNYDP 268


>gi|320546911|ref|ZP_08041213.1| thymidylate synthase [Streptococcus equinus ATCC 9812]
 gi|320448429|gb|EFW89170.1| thymidylate synthase [Streptococcus equinus ATCC 9812]
          Length = 295

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 23/244 (9%)

Query: 24  VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIW 80
             ++   G    +DLS+G FP+ T + +  KS + E+ W  +  +N +S L+ ++ V  W
Sbjct: 51  ANSKYVTGAFAEYDLSRGEFPITTLRPIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYW 110

Query: 81  DEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALI 138
           ++W  D  G +G  YG   +          D I  I++ L A+P++RR+++S W+  A  
Sbjct: 111 NDWEVDGTGTIGERYGAVVKKH--------DIIRKILKQLEANPWNRRNVISLWDYEAFE 162

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMMLASVI 192
           +   L PC   FQ   D  ++   +Y      QRS D+ +    N   Y  L MM+A   
Sbjct: 163 NTDGLLPC--AFQTMYDVRRVDGDIYLDATLTQRSNDMLVSHHINAMQYVALQMMIAKHF 220

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDFTLR 250
           G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  D    + EDF L 
Sbjct: 221 GWKVGKFFYFVNNLHIYDNQFEQAKELLRREPTDCKPRLVLNVPDGTDFFDIKPEDFELV 280

Query: 251 SYEP 254
            Y+P
Sbjct: 281 DYDP 284


>gi|116512335|ref|YP_809551.1| thymidylate synthase [Lactococcus lactis subsp. cremoris SK11]
 gi|123125483|sp|Q02Y43|TYSY_LACLS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116107989|gb|ABJ73129.1| thymidylate synthase [Lactococcus lactis subsp. cremoris SK11]
          Length = 279

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD-SNVSYLH-RH 75
           +D     ++   G  + +DL KG FP+ T + +  KS + EL+W  +   S +S L  ++
Sbjct: 30  KDGQMANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKELMWIYQDQTSELSVLEEKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
           GV  W EW   DG +G  YG   + +        + I  +++ L  +P++RR+I++ W  
Sbjct: 90  GVKYWGEWRIGDGTIGQRYGATVKKY--------NIIGKLLEGLAKNPWNRRNIINLWQY 141

Query: 136 ALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
              ++   L PC     F V   K     L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 EDFEETEGLLPCAFQTMFDVRREKDGQIYLDATLIQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247
               ++ G+F + + ++H+Y+N FEQA+  + R+     P++++N P+  +    + EDF
Sbjct: 202 KHFSWKVGKFFYFVNNLHIYDNQFEQANELMKRTASEKEPRLVLNVPDGTNFFDIKPEDF 261

Query: 248 TLRSYEP 254
            L  YEP
Sbjct: 262 ELVDYEP 268


>gi|296876428|ref|ZP_06900480.1| thymidylate synthase [Streptococcus parasanguinis ATCC 15912]
 gi|296432718|gb|EFH18513.1| thymidylate synthase [Streptococcus parasanguinis ATCC 15912]
          Length = 279

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 23/249 (9%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G  M FDL+KG FP+ T + +  KS + E+LW  +  SN   +   ++
Sbjct: 30  KDGRTANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKEMLWIYQDQSNSLDVLEEKY 89

Query: 76  GVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D   +G  YG   +          D  + I++ L A+P++RR+I++ W+
Sbjct: 90  NVHYWNDWEVGDSRTIGQRYGAVVKKH--------DITNKILKQLEANPWNRRNIITLWD 141

Query: 135 V-ALIDKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMM 187
             A  +   L PC   FQ   D  ++  ++Y      QRS D+ +    N   Y  L MM
Sbjct: 142 YDAFEESEGLLPC--AFQTMFDVRRVEGEIYLDATLTQRSNDMLVAHHINAMQYVALQMM 199

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N FEQA+  L R      P++++N P+  +    + E
Sbjct: 200 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREATNCQPRLVLNVPDGTNFFDIKPE 259

Query: 246 DFTLRSYEP 254
           DF L  Y+P
Sbjct: 260 DFELVDYDP 268


>gi|56808901|ref|ZP_00366610.1| COG0207: Thymidylate synthase [Streptococcus pyogenes M49 591]
 gi|94990255|ref|YP_598355.1| thymidylate synthase [Streptococcus pyogenes MGAS10270]
 gi|94994176|ref|YP_602274.1| thymidylate synthase [Streptococcus pyogenes MGAS10750]
 gi|50903125|gb|AAT86840.1| Thymidylate synthase [Streptococcus pyogenes MGAS10394]
 gi|71802428|gb|AAX71781.1| thymidylate synthase [Streptococcus pyogenes MGAS6180]
 gi|94543763|gb|ABF33811.1| Thymidylate synthase [Streptococcus pyogenes MGAS10270]
 gi|94547684|gb|ABF37730.1| Thymidylate synthase [Streptococcus pyogenes MGAS10750]
          Length = 287

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G    +DL+KG FP+ T + +  KS + EL W  +  SN +  L  ++
Sbjct: 38  KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 97

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W+EW  D+   +G  YG   +          D IS I++ L  +P++RR+++S W+
Sbjct: 98  NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 149

Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC     F V    ++  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 150 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMIA 209

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N F+QA   L R P  + P++++N P+  +    + +DF
Sbjct: 210 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDGTNFFDIKPDDF 269

Query: 248 TLRSYEP 254
            L++Y+P
Sbjct: 270 ELQNYDP 276


>gi|19703585|ref|NP_603147.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|22096218|sp|Q8RGP6|TYSY_FUSNN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|19713687|gb|AAL94446.1| Thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 275

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W ++   +NV  L+  G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDVLNELGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             WDEW  +DG +G  YG Q             Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWDEWKMQDGTIGKAYGYQI---AQETFGQKSQLHYVINELKKNPNSRRIMTEIWIPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E I  + ++H+Y+ H+++   Q++R      ++ IN N   +  F+ +D  +  Y+    
Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN-NFKSIFDFKPDDIEIIDYKYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VSYEVAI 275


>gi|55820657|ref|YP_139099.1| thymidylate synthase [Streptococcus thermophilus LMG 18311]
 gi|62901192|sp|Q5M5B3|TYSY_STRT2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|55736642|gb|AAV60284.1| thymidylate synthase [Streptococcus thermophilus LMG 18311]
          Length = 286

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 16/249 (6%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+ W  +  +N +  L  ++
Sbjct: 30  KDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W++W   + E  P      RS     G V+   D I+ ++  L A+P++RR+++S 
Sbjct: 90  NVHYWNDW---EVEGVPANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146

Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+    ++ A L PC     F V    ++  L   L QRS D+ +    N   Y  L MM
Sbjct: 147 WDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDGTLTQRSNDMLVAHHINAMQYVALQMM 206

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + E
Sbjct: 207 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLVLNVPDETNFFDIKPE 266

Query: 246 DFTLRSYEP 254
           DF L  Y+P
Sbjct: 267 DFELVDYDP 275


>gi|228478258|ref|ZP_04062866.1| thymidylate synthase [Streptococcus salivarius SK126]
 gi|228249937|gb|EEK09207.1| thymidylate synthase [Streptococcus salivarius SK126]
          Length = 286

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 16/249 (6%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+ W  +  +N +  L  ++
Sbjct: 30  KDGTTANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEVFWIYQDQTNSLDVLEDKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W++W   + E  P      RS     G V+   D I+ ++  L A+P++RR+++S 
Sbjct: 90  NVHYWNDW---EVEGVPANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146

Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+    +  A L PC     F V    ++  L   L QRS D+ +    N   Y  L MM
Sbjct: 147 WDYEAFEATAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSNDMLVAHHINAMQYVALQMM 206

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + E
Sbjct: 207 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLVLNVPDGTNFFDIKPE 266

Query: 246 DFTLRSYEP 254
           DF L  Y+P
Sbjct: 267 DFELVDYDP 275


>gi|237737848|ref|ZP_04568329.1| thymidylate synthase [Fusobacterium mortiferum ATCC 9817]
 gi|229419728|gb|EEO34775.1| thymidylate synthase [Fusobacterium mortiferum ATCC 9817]
          Length = 274

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 28/278 (10%)

Query: 4   YLDLLRHVIKFG----SDRRDRTGVGT----RSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54
           Y D++  + K+G     + R +   GT    +S  GYQ R D S     L+TT+    K+
Sbjct: 8   YKDIVETIDKYGIWSEGNVRTKYADGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPNKA 67

Query: 55  VVHELLW-FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQ-------WRSWPDYDG 106
            + EL W ++   +NV  L++     WDEW  +DG +G  YG Q       ++S  DY  
Sbjct: 68  PIRELYWIWIMQSNNVEELNKLKCKFWDEWKMEDGTIGKAYGYQIAKQTFGYKSQLDY-- 125

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
                   I+  ++ +P SRR +   W    +DKMAL PC  L Q+ V   KL  ++ QR
Sbjct: 126 --------IINEIKKNPNSRRIMTEIWVPEDLDKMALTPCVHLTQWSVIGNKLYLEVRQR 177

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV LG+  N+  YS+L  ++A   G +  + I ++ +VH+Y+ H      Q+ R    
Sbjct: 178 SCDVALGLVANVFQYSVLHKLVAMECGLEPADIIWSIHNVHIYDRHMPVLLEQIKREEFE 237

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              + I  N   +  F+ +D  + +Y+    I  +V++
Sbjct: 238 GAILKIE-NFTSIYDFKPDDVVVENYKYGDKISYEVAI 274


>gi|172046221|sp|Q1JM80|TYSY_STRPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172046745|sp|Q1JC96|TYSY_STRPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 279

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G    +DL+KG FP+ T + +  KS + EL W  +  SN +  L  ++
Sbjct: 30  KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 89

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W+EW  D+   +G  YG   +          D IS I++ L  +P++RR+++S W+
Sbjct: 90  NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 141

Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC     F V    ++  L   L QRS D+ +    N   Y  L MM A
Sbjct: 142 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMFA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N F+QA   L R P  + P++++N P+  +    + +DF
Sbjct: 202 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDGTNFFDIKPDDF 261

Query: 248 TLRSYEP 254
            L++Y+P
Sbjct: 262 ELQNYDP 268


>gi|94988375|ref|YP_596476.1| thymidylate synthase [Streptococcus pyogenes MGAS9429]
 gi|94992257|ref|YP_600356.1| thymidylate synthase [Streptococcus pyogenes MGAS2096]
 gi|94541883|gb|ABF31932.1| thymidylate synthase [Streptococcus pyogenes MGAS9429]
 gi|94545765|gb|ABF35812.1| Thymidylate synthase [Streptococcus pyogenes MGAS2096]
          Length = 287

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G    +DL+KG FP+ T + +  KS + EL W  +  SN +  L  ++
Sbjct: 38  KDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKY 97

Query: 76  GVSIWDEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W+EW  D+   +G  YG   +          D IS I++ L  +P++RR+++S W+
Sbjct: 98  NVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKILKQLAENPWNRRNVISLWD 149

Query: 135 V-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC     F V    ++  L   L QRS D+ +    N   Y  L MM A
Sbjct: 150 YEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMFA 209

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N F+QA   L R P  + P++++N P+  +    + +DF
Sbjct: 210 KHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDGTNFFDIKPDDF 269

Query: 248 TLRSYEP 254
            L++Y+P
Sbjct: 270 ELQNYDP 276


>gi|146737945|gb|ABQ42561.1| thymidylate synthase [Peanut witches'-broom phytoplasma]
          Length = 88

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 69/83 (83%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M +YL+L R ++K+G+ R +RT V T+S FGY MRF+L++GFPLLTTKK+++  V+HELL
Sbjct: 1  MEKYLNLCRTILKYGNIRENRTKVLTKSIFGYHMRFNLTQGFPLLTTKKINFNLVIHELL 60

Query: 61 WFLRGDSNVSYLHRHGVSIWDEW 83
          WF++GD+N+ YL ++ V+IW+EW
Sbjct: 61 WFIKGDTNIRYLVQNKVNIWNEW 83


>gi|310659774|ref|YP_003937495.1| thymidylate synthase (ts) (tsase) [Clostridium sticklandii DSM 519]
 gi|308826552|emb|CBH22590.1| Thymidylate synthase (TS) (TSase) [Clostridium sticklandii]
          Length = 277

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 112/227 (49%), Gaps = 15/227 (6%)

Query: 35  RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD-SNVSYL-HRHGVSIWDEWADKDGELG 91
            +D+SKG FPL+T + + WKS V E+LW  +   S+++ L  ++ +  WDEW   DG +G
Sbjct: 48  EYDISKGEFPLITYRPISWKSAVKEILWIYQDQTSSLNVLKEKYDIHWWDEWNIGDGTIG 107

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA-LIDKMALPPCHCLF 150
             YG   + +        D ++ +++SL+  PY RRHI++ +     ++   L PC    
Sbjct: 108 QRYGATVKKY--------DLVNKLLKSLKEIPYGRRHIINLYQYEDFLETDGLYPCAMET 159

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
            + V    L   L QRS DV +    N   Y+ L MM+A  +G   G+  H + + H+Y+
Sbjct: 160 HWSVRGDFLDVTLIQRSSDVAVANCINKIQYTALLMMVARHVGLSPGKLCHYVHNAHIYD 219

Query: 211 NHFEQADLQLSR---SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
            H +     L R      + P +I+N    D  +F   DF L  Y P
Sbjct: 220 RHIDDVISLLKRDVGKEISHPSLILNSQKTDFYNFTINDFDLIDYNP 266


>gi|291167144|gb|EFE29190.1| thymidylate synthase [Filifactor alocis ATCC 35896]
          Length = 278

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 16/230 (6%)

Query: 35  RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIWDEW-ADKDGEL 90
            +DL KG FP+LT + + WKS + E+LW  +  +N +  L  ++ +  W++W  ++   +
Sbjct: 48  EYDLQKGEFPILTLRHIAWKSSIKEILWIYQDQTNSLDVLEDKYDIHWWNDWEVEQSRTI 107

Query: 91  GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCL 149
           G  YG   + +        D ++ ++  L+  PY RRHI++ +      +   L PC   
Sbjct: 108 GQRYGATVKRY--------DLMNKLLNGLKTQPYGRRHIINLYQYQDFQETDGLFPCAME 159

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
             + V +G L   L QRS DV +    N   Y  L MM+A    F+ G+F H + + H+Y
Sbjct: 160 THWSVRDGILDMTLIQRSSDVPVANAINKLQYVALMMMVAKHCDFKLGKFCHLVQNAHIY 219

Query: 210 NNHFEQADLQLSRSPR---TLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           + H EQ    L R  +   T  +++++ +  D  +F  EDF L +YEP+ 
Sbjct: 220 DRHVEQVKEMLERKGQEDCTDLRLVLDTDKTDFYTFTLEDFKLENYEPNK 269


>gi|34763229|ref|ZP_00144192.1| Thymidylate synthase [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|237741125|ref|ZP_04571606.1| thymidylate synthase [Fusobacterium sp. 4_1_13]
 gi|294784655|ref|ZP_06749944.1| thymidylate synthase [Fusobacterium sp. 3_1_27]
 gi|27887109|gb|EAA24217.1| Thymidylate synthase [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|229430657|gb|EEO40869.1| thymidylate synthase [Fusobacterium sp. 4_1_13]
 gi|294487871|gb|EFG35230.1| thymidylate synthase [Fusobacterium sp. 3_1_27]
          Length = 275

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W ++   +NV  L + G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDVLDKLGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             WDEW  +DG +G  YG Q     +  G    Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWDEWKMQDGTIGKAYGYQIAK--ETFGQK-SQLHYVINELKNNPNSRRIMTEIWIPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E I  + ++H+Y+ H+++   Q++R      ++ IN N   +  F+ +D  +  Y+    
Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRKTFEPAKIKIN-NFKSIFDFKPDDIEIIDYKYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VSYEVAI 275


>gi|256846261|ref|ZP_05551718.1| thymidylate synthase [Fusobacterium sp. 3_1_36A2]
 gi|256718030|gb|EEU31586.1| thymidylate synthase [Fusobacterium sp. 3_1_36A2]
          Length = 275

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W ++   +NV  L + G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDVLDKLGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             WDEW  +DG +G  YG Q     +  G    Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWDEWKMQDGTIGKAYGYQIAK--ETFGQK-SQLHYVINELKNNPNSRRIMTEIWIPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E I  + ++H+Y+ H+++   Q++R      ++ IN N   +  F+ +D  +  Y+    
Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRKTFEPAKIKIN-NFKSIFDFKPDDIEIIDYKYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VSYEVAI 275


>gi|256028293|ref|ZP_05442127.1| thymidylate synthase [Fusobacterium sp. D11]
 gi|289766222|ref|ZP_06525600.1| thymidylate synthase [Fusobacterium sp. D11]
 gi|289717777|gb|EFD81789.1| thymidylate synthase [Fusobacterium sp. D11]
          Length = 275

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W ++   +NV  L + G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDILDKLGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             WDEW  +DG +G  YG Q     +  G    Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWDEWKMQDGTIGKAYGYQIAK--ETFGQK-SQLHYVINELKNNPNSRRIMTEIWIPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E I  + ++H+Y+ H+++   Q++R      ++ IN N   +  F+ +D  +  Y+    
Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN-NFKSIFDFKPDDVEILDYKYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VSYEVAI 275


>gi|322389617|ref|ZP_08063165.1| thymidylate synthase [Streptococcus parasanguinis ATCC 903]
 gi|321143616|gb|EFX39046.1| thymidylate synthase [Streptococcus parasanguinis ATCC 903]
          Length = 279

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D     ++   G  M FDL+KG FP+ T + +  KS + E+LW  +  SN +  L  ++
Sbjct: 30  KDGRTANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKEMLWIYQDQSNRLDVLEDKY 89

Query: 76  GVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   +   +G  YG   +          D  + I++ L  +P++RR+I+S W+
Sbjct: 90  NVHYWNDWEVGNSRTIGQRYGAVVKKH--------DITNKILKQLEDNPWNRRNIISLWD 141

Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC    +F     +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YEAFEETEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N FEQA+  L R P    P +++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPHLVLNVPDGTNFFDIKPEDF 261

Query: 248 TLRSYEP 254
            L  Y+P
Sbjct: 262 ELVDYDP 268


>gi|33304365|gb|AAQ02620.1| thymidylate synthase [Hartmannella cantabrigiensis]
          Length = 136

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 13/111 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+++  +I+ G  + DRTGVGT S FG QMRF L  G FPLLTTK+V WK VV ELL
Sbjct: 11  YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWR 99
           WF+RGD+N + L + GV IWD     ++ D  G       +LGP+YG QWR
Sbjct: 71  WFIRGDTNGANLSKKGVKIWDANGSRQFLDSRGLTQREENDLGPVYGFQWR 121


>gi|254302644|ref|ZP_04970002.1| thymidylate synthase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322836|gb|EDK88086.1| thymidylate synthase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 275

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W ++   +NV  L + G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDVLDKLGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             WDEW  +DG +G  YG Q     +  G    Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWDEWKMQDGTIGKAYGYQIAQ--ETFGQK-SQLHYVINELKKNPNSRRIMTEIWIPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E I  + +VH+Y+ H+++   Q++       ++ IN N   +  F+ +D  +  Y+    
Sbjct: 210 EIIWNIHNVHIYDRHYDKLIKQVNGETFEPAKIKIN-NFKSIFDFKPDDIEILDYKYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VSYEVAI 275


>gi|237739981|ref|ZP_04570462.1| thymidylate synthase [Fusobacterium sp. 2_1_31]
 gi|229421998|gb|EEO37045.1| thymidylate synthase [Fusobacterium sp. 2_1_31]
          Length = 275

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W ++   +NV+ L+  G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAAIRELYWIWILQSNNVNVLNDLGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             WDEW  +DG +G  YG Q  +   Y      Q+  ++  LR +P SRR +   W    
Sbjct: 93  KFWDEWKQEDGTIGKAYGYQ-IAQETYGQK--SQLHYVINELRKNPNSRRIMTEIWVPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  Y++L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYAVLHKLVALECGLEAA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           + I  + ++H+Y+ H+++   Q++       ++ IN N   +  F+ +D  +  Y+    
Sbjct: 210 DIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN-NFKSIFDFKPDDVEIVDYKYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VNYEVAI 275


>gi|251782256|ref|YP_002996558.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242390885|dbj|BAH81344.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 281

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 23/249 (9%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DL+KG FP+ T + +  KS + ELLW  +  +N   +  +++
Sbjct: 32  KDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELLWIYQDQTNSLDVLENKY 91

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W+EW     E+G     Q R+     G V+   D IS +++ L  +P++RR+++S 
Sbjct: 92  NVHYWNEW-----EVG-----QTRTIGQRYGAVVKKHDIISKLLKQLAENPWNRRNVISL 141

Query: 133 WNV-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+  A  +   L PC     F V    ++  L   L QRS D+ +    N   Y  L MM
Sbjct: 142 WDYEAFEETEGLLPCAFQTMFDVRRVGEDLYLDATLTQRSNDMLVAHHINAMQYVALQMM 201

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N F QA   L R P    P++++N P+  +    + E
Sbjct: 202 IAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRQPTDCQPKLVLNVPDGTNFFDIKPE 261

Query: 246 DFTLRSYEP 254
           DF L+ YEP
Sbjct: 262 DFELQDYEP 270


>gi|296327655|ref|ZP_06870198.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296155245|gb|EFG96019.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 275

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W ++   +NV  L+  G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNNVDVLNELGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             W+EW  +DG +G  YG Q     +  G    Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWNEWKMQDGTIGKAYGYQIAQ--ETFGQK-SQLHYVINELKKNPNSRRIMTEIWIPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E I  + ++H+Y+ H+++   Q++R      ++ IN N   +  F+ +D  +  Y+    
Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN-NFKSIFDFKPDDIEIIDYKYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VSYEVAI 275


>gi|322411591|gb|EFY02499.1| thymidylate synthase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 279

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 23/249 (9%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DL+KG FP+ T + +  +S + ELLW  +  +N   +  +++
Sbjct: 30  KDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIQSAIKELLWIYQDQTNSLDVLENKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W+EW     E+G     Q R+     G V+   D IS +++ L  +P++RR+++S 
Sbjct: 90  NVHYWNEW-----EVG-----QTRTIGQRYGAVVKKHDIISKLLKQLSENPWNRRNVISL 139

Query: 133 WNV-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+  A  +   L PC     F V    +N  L   L QRS D+ +    N   Y  L MM
Sbjct: 140 WDYEAFEETEGLLPCAFQTMFDVRRVEENLYLDATLTQRSNDMLVAHHINAMQYVALQMM 199

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N F QA   L R P    P++++N P+  +    + E
Sbjct: 200 IAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRHPTDCQPKLVLNVPDGTNFFDIKPE 259

Query: 246 DFTLRSYEP 254
           DF L+ YEP
Sbjct: 260 DFELQDYEP 268


>gi|323127105|gb|ADX24402.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 279

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 23/249 (9%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DL+KG FP+ T + +  KS + ELLW  +  +N   +  +++
Sbjct: 30  KDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELLWIYQDQTNSLDVLENKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W+EW     E+G     Q R+     G V+   D IS +++ L  +P++RR+++S 
Sbjct: 90  NVHYWNEW-----EVG-----QTRTIGQRYGAVVKKHDIISKLLKQLAENPWNRRNVISL 139

Query: 133 WNV-ALIDKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+  A  +   L PC     F V    ++  L   L QRS D+ +    N   Y  L MM
Sbjct: 140 WDYEAFEETEGLLPCAFQTMFDVRRVGEDLYLDATLTQRSNDMLVAHHINAMQYVALQMM 199

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N F QA   L R P    P++++N P+  +    + E
Sbjct: 200 IAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRQPTDCQPKLVLNVPDGTNFFDIKPE 259

Query: 246 DFTLRSYEP 254
           DF L+ YEP
Sbjct: 260 DFELQDYEP 268


>gi|237745327|ref|ZP_04575808.1| thymidylate synthase [Fusobacterium sp. 7_1]
 gi|229432556|gb|EEO42768.1| thymidylate synthase [Fusobacterium sp. 7_1]
          Length = 275

 Score =  110 bits (274), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W     SN V  L + G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNDVDVLDKLGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             WDEW  +DG +G  YG Q             Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWDEWKMQDGTIGKAYGYQI---AQETFGQKSQLHYVINELKNNPNSRRIMTEIWIPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E I  + ++H+Y+ H+++   Q++R      ++ IN N   +  F+ +D  + +Y     
Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN-NFKSIFDFKPDDIEIINYRYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VSYEVAI 275


>gi|260495617|ref|ZP_05815741.1| thymidylate synthase [Fusobacterium sp. 3_1_33]
 gi|260196800|gb|EEW94323.1| thymidylate synthase [Fusobacterium sp. 3_1_33]
          Length = 275

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W     SN V  L + G 
Sbjct: 33  DGTAAYYKSYIGYQFRLDNSDDEAHLITSRFAPSKAPIRELYWIWILQSNDVDVLDKLGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             WDEW  +DG +G  YG Q             Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWDEWKMQDGTIGKAYGYQI---AQETFGQKSQLHYVINELKNNPNSRRIMTEIWIPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSVLHKLVALECGLEPA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           E I  + ++H+Y+ H+++   Q++R      ++ IN N   +  F+ +D  +  Y+    
Sbjct: 210 EIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN-NFKSIFDFKPDDVEILDYKYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VSYEVAI 275


>gi|312865238|ref|ZP_07725466.1| thymidylate synthase [Streptococcus downei F0415]
 gi|311099349|gb|EFQ57565.1| thymidylate synthase [Streptococcus downei F0415]
          Length = 279

 Score =  109 bits (273), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 19/231 (8%)

Query: 35  RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKD-GEL 90
           ++DLSKG FP+ T + +  KS + E+ W  +  SN   L   ++ V  W++W   D G +
Sbjct: 46  QYDLSKGEFPITTLRPIPIKSAIKEIFWIYQDQSNDLDLLNEKYQVKYWNDWEVGDTGTI 105

Query: 91  GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALIDKMALPPC--H 147
           G  YG   +          D I+ I++ L  +P++RR+++S W+  A  +   L PC   
Sbjct: 106 GQRYGAVVKKH--------DIINKILKQLAENPWNRRNVISLWDYEAFEESEGLLPCAFQ 157

Query: 148 CLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
            +F     +G   L   L QRS D+ +    N   Y  L MM+A   G++ G+F + + +
Sbjct: 158 TMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNN 217

Query: 206 VHLYNNHFEQADLQLSRSPR-TLPQMIIN-PNIVDLLSFRYEDFTLRSYEP 254
           +H+Y+N F+QA   L+R+P    P++I++ P+  +    + EDF L  YEP
Sbjct: 218 LHIYDNQFDQAQELLNRTPADKEPRLILDVPDGTNFFDIKPEDFQLLDYEP 268


>gi|171778303|ref|ZP_02919509.1| hypothetical protein STRINF_00351 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283003|gb|EDT48427.1| hypothetical protein STRINF_00351 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 279

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 124/243 (51%), Gaps = 23/243 (9%)

Query: 24  VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RHGVSIW 80
             ++   G    +DLSKG FP+ T + +  KS + E+ W  +  +N +S L+ ++ V  W
Sbjct: 35  ANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYW 94

Query: 81  DEW-ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALI 138
           ++W  D  G +G  YG   +          D I  I++ L  +P++RR+++S W+  A  
Sbjct: 95  NDWEVDGTGTIGERYGAVVKKH--------DIIRKILKQLEENPWNRRNVISLWDYEAFE 146

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSLLTMMLASVI 192
           +   L PC   FQ   D  ++   +Y      QRS D+ +    N   Y  L MM+A   
Sbjct: 147 NTDGLLPC--AFQTMYDVRRVDGDIYLDATLTQRSNDMLVSHHINAMQYVALQMMIAKHF 204

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYEDFTLR 250
           G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  D    + EDF L 
Sbjct: 205 GWKVGKFFYFVNNLHIYDNQFEQAEELLRREPTDCKPRLVLNVPDGTDFFDIKPEDFELV 264

Query: 251 SYE 253
            Y+
Sbjct: 265 DYD 267


>gi|33304359|gb|AAQ02616.1| thymidylate synthase [Hartmannella cantabrigiensis]
          Length = 136

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 73/111 (65%), Gaps = 13/111 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+++  +I+ G  + DRTGVGT S FG QMRF L  G FPLLTTK+V WK VV ELL
Sbjct: 11  YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWR 99
           WF+RGD N + L + GV IWD     ++ D  G       +LGP+YG QWR
Sbjct: 71  WFIRGDINGANLSKKGVKIWDANGSRQFLDSRGLTQREENDLGPVYGFQWR 121


>gi|15673523|ref|NP_267697.1| thymidylate synthase [Lactococcus lactis subsp. lactis Il1403]
 gi|281492105|ref|YP_003354085.1| thymidylate synthase [Lactococcus lactis subsp. lactis KF147]
 gi|13638515|sp|P19368|TYSY_LACLA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|12724542|gb|AAK05639.1|AE006385_1 thymidylate synthase [Lactococcus lactis subsp. lactis Il1403]
 gi|13310416|gb|AAK18280.1|AF336368_1 thymidylate synthase [Lactococcus lactis subsp. lactis]
 gi|281375788|gb|ADA65285.1| Thymidylate synthase [Lactococcus lactis subsp. lactis KF147]
          Length = 279

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD-SNVSYLH-RH 75
           +D     ++   G  + +DL KG FP+ T + +  KS + EL+W  +   S ++ L  ++
Sbjct: 30  KDGQTANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKELMWIYQDQTSELAILEEKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
           GV  W EW   DG +G  YG   + +        + I  ++  L  +P++RR+I++ W  
Sbjct: 90  GVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLDGLAKNPWNRRNIINLWQY 141

Query: 136 ALIDKM-ALPPCHCLFQFYV---DNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
              ++   L PC     F V    +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 EDFEETEGLLPCAFQTMFDVRREQDGQIYLDATLIQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQMIIN-PNIVDLLSFRYEDF 247
               ++ G+F + + ++H+Y+N FEQA+  + R+     P++++N P+  +    + EDF
Sbjct: 202 KHFSWKVGKFFYFVNNLHIYDNQFEQANELVKRTASDKEPRLVLNVPDGTNFFDIKPEDF 261

Query: 248 TLRSYEP 254
            L  YEP
Sbjct: 262 ELVDYEP 268


>gi|326407008|gb|ADZ64079.1| thymidylate synthase [Lactococcus lactis subsp. lactis CV56]
          Length = 279

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD-SNVSYLH-RH 75
           +D     ++   G  + +DL KG FP+ T + +  KS + EL+W  +   S ++ L  ++
Sbjct: 30  KDGQTANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKELMWIYQDQTSELAILEEKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
           GV  W EW   DG +G  YG   + +        + I  ++  L  +P++RR+I++ W  
Sbjct: 90  GVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLDGLAKNPWNRRNIINLWQY 141

Query: 136 ALIDKM-ALPPCHCLFQFYV---DNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
              ++   L PC     F V    +G+  L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 EDFEETEGLLPCAFQTMFDVRCEQDGQIYLDATLIQRSNDMLVAHHINAMQYVALQMMIA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQMIIN-PNIVDLLSFRYEDF 247
               ++ G+F + + ++H+Y+N FEQA+  + R+     P++++N P+  +    + EDF
Sbjct: 202 KHFSWKVGKFFYFVNNLHIYDNQFEQANELVKRTASDKEPRLVLNVPDGTNFFDIKPEDF 261

Query: 248 TLRSYEP 254
            L  YEP
Sbjct: 262 ELVDYEP 268


>gi|225870473|ref|YP_002746420.1| thymidylate synthase [Streptococcus equi subsp. equi 4047]
 gi|225699877|emb|CAW93768.1| thymidylate synthase [Streptococcus equi subsp. equi 4047]
          Length = 279

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 128/253 (50%), Gaps = 29/253 (11%)

Query: 19  RDRTGVGTRSTF--GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--H 73
           R + G    S +  G    +DLSKG FP+ T + +  KS + EL W  +  SN   +  +
Sbjct: 28  RYKNGQTANSKYITGAFAEYDLSKGEFPITTLRSIPIKSAIKELFWIYQDQSNSLDVLEN 87

Query: 74  RHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIV 130
           ++ V  W+EW     E+G     Q R+     G ++   D IS I++ L  +P++RR+++
Sbjct: 88  KYNVHYWNEW-----EVG-----QTRTIGQRYGAIVKKHDIISKILKQLEDNPWNRRNVI 137

Query: 131 SAWNV-ALIDKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSL 183
           S W+  A  +   L PC   FQ   D  ++  +LY      QRS D+ +    N   Y  
Sbjct: 138 SLWDYEAFEESEGLLPC--AFQVMFDVRRVDGELYLDATLTQRSNDMLVAHHINAMQYVA 195

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLS 241
           L +M+A   G++ G+F + + ++H+Y+N F QA   L R P    P+++++ P+  D   
Sbjct: 196 LQLMIAKHFGWKAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKLLLHVPDGTDFFD 255

Query: 242 FRYEDFTLRSYEP 254
            R EDF L+ Y P
Sbjct: 256 IRPEDFELQDYYP 268


>gi|294782923|ref|ZP_06748249.1| thymidylate synthase [Fusobacterium sp. 1_1_41FAA]
 gi|294481564|gb|EFG29339.1| thymidylate synthase [Fusobacterium sp. 1_1_41FAA]
          Length = 275

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W ++   +NV  L+  G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSGDEAHLITSRFAPSKAAIRELYWIWILQSNNVDVLNDLGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             WDEW  +DG +G  YG Q  +   Y      Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWDEWKQEDGTIGKAYGYQ-IAQETYGQK--SQLHYVINELKKNPNSRRIMTEIWVPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  Y++L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYAVLHKLVALECGLEAA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           + I  + ++H+Y+ H+++   Q++       ++ IN N   +  F+ +D  +  Y+    
Sbjct: 210 DIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN-NFKSIFDFKPDDVEIVDYKYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VNYEVAI 275


>gi|29135171|ref|NP_803801.1| ORF235 [Pseudomonas phage phiKZ]
 gi|18996700|gb|AAL83136.1|AF399011_235 PHIKZ235 [Pseudomonas phage phiKZ]
          Length = 488

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 91/174 (52%), Gaps = 19/174 (10%)

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           I G   R  P +D    +Q+ ++++  R    +    V  W    +D+   P        
Sbjct: 332 ISGEITRGQPPFDS--AEQVKALLRVCRGYEKATDEAVVEW----LDQHGAP-------- 377

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                 +SCQLYQRS D FLG PFNI  YSLLT MLA+ +     EFI T GDVH+Y+NH
Sbjct: 378 ---KRAISCQLYQRSCDTFLGKPFNITFYSLLTHMLANQMNMIAEEFIWTGGDVHIYSNH 434

Query: 213 FEQADLQLSRSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILAKVSV 264
            EQ DLQL+R P+ LP +      +  D+     +DF + +YE H+ I  KV+V
Sbjct: 435 QEQTDLQLTREPKVLPTIRFKQEAIGKDIREIGVDDFVIENYEYHSHIAGKVAV 488



 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
          M QYL+ +R V + G  + DRTG GT+S FG Q R+ L     P++TTKK+H  SV+HEL
Sbjct: 1  MEQYLNSIRLVKEHGVHKGDRTGTGTQSMFGQQERYSLRNNRLPVVTTKKIHLASVIHEL 60

Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD 87
           W L GD+ V YL  +GV IW+EW   +
Sbjct: 61 FWMLSGDTKVDYLIANGVRIWNEWVKPE 88



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 33/100 (33%)

Query: 88  GELGPIYGVQWRS-----------WPDYDGNVIDQISSI--------------------- 115
           G+LG +YG  WR+           W DY+    D ++ I                     
Sbjct: 207 GDLGAVYGKTWRNLEDTRVIPKYEWFDYEKRGFDFVADIPGTTMETDRCVVTRRIDQIQD 266

Query: 116 -VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154
            +  LR +P SRR IV AW   LID+ ALPPCH   QF+ 
Sbjct: 267 IIDQLRTNPDSRRIIVCAWAPHLIDEQALPPCHAFIQFWT 306


>gi|319939274|ref|ZP_08013637.1| thymidylate synthase [Streptococcus anginosus 1_2_62CV]
 gi|319811670|gb|EFW07946.1| thymidylate synthase [Streptococcus anginosus 1_2_62CV]
          Length = 279

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 23/256 (8%)

Query: 14  FGSDRRDRTGVG----TRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN 68
           F  + R R   G    ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN
Sbjct: 21  FSENARPRYKNGKVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSN 80

Query: 69  VSYL--HRHGVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYS 125
              +   ++ V  W++W   D   +G  YG   +          D I+ I++ L  +P++
Sbjct: 81  SLDILEEKYNVHYWNDWEVGDTRTIGLRYGAVVKKH--------DIINKILKQLEINPWN 132

Query: 126 RRHIVSAWNV-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIAS 180
           RR+I+S W+  A  +   L PC    +F     +G   L   L QRS D+ +    N   
Sbjct: 133 RRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQ 192

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQMIIN-PNIVD 238
           Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P   LP++++N P+  +
Sbjct: 193 YVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPTDCLPRLVLNVPDGTN 252

Query: 239 LLSFRYEDFTLRSYEP 254
               + E+F L  Y P
Sbjct: 253 FFDIKAENFELVDYIP 268


>gi|262067031|ref|ZP_06026643.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693]
 gi|291379240|gb|EFE86758.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693]
          Length = 275

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLW-FLRGDSNVSYLHRHGV 77
           D T    +S  GYQ R D S     L+T++    K+ + EL W ++   +NV+ L+  G 
Sbjct: 33  DGTAAHYKSYIGYQFRLDNSGDEAHLITSRFAPSKAPIRELYWIWILQSNNVNILNDLGC 92

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             WDEW  +DG +G  YG Q  +   Y      Q+  ++  L+ +P SRR +   W    
Sbjct: 93  KFWDEWKQEDGTIGKAYGYQ-IAQETYGQK--SQLHYVINELKKNPNSRRIMTEIWVPNE 149

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           + +MAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  Y++L  ++A   G +  
Sbjct: 150 LSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYAVLHKLVALECGLEAA 209

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           + I  + ++H+Y+ H+++   Q++       ++ IN N   +  F+ +D  +  Y+    
Sbjct: 210 DIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN-NFKSIFDFKPDDVEIVDYKYGEK 268

Query: 258 ILAKVSV 264
           +  +V++
Sbjct: 269 VSYEVAI 275


>gi|329117733|ref|ZP_08246450.1| thymidylate synthase [Streptococcus parauberis NCFD 2020]
 gi|326908138|gb|EGE55052.1| thymidylate synthase [Streptococcus parauberis NCFD 2020]
          Length = 279

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 122/247 (49%), Gaps = 19/247 (7%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    +DLSKG FP+ T + +  KS + ELLW  +  SN   +   ++
Sbjct: 30  KDGKTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKELLWIYQDQSNSLDILEEKY 89

Query: 76  GVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
            V  W++W   D   +G  YG   +          D I+ I++ L  +P++RR+++S W+
Sbjct: 90  NVHYWNDWEVGDTRTIGQRYGAVVKKH--------DIINKILKQLEDNPWNRRNVISLWD 141

Query: 135 V-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             A  +   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM+A
Sbjct: 142 YQAFEESEGLLPCAFQTMFDVRRVDGTIYLDATLVQRSNDMLVAHHINAMQYVALQMMVA 201

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQMIIN-PNIVDLLSFRYEDF 247
              G++ G+F + + ++H+Y+N F QA+  L R     +PQ+++N P+  +    + EDF
Sbjct: 202 KHFGWKVGKFFYFINNLHIYDNQFPQAEELLRRKESDCMPQLMLNVPDGTNFFDIKAEDF 261

Query: 248 TLRSYEP 254
            L  Y P
Sbjct: 262 ELIDYSP 268


>gi|255635545|gb|ACU18123.1| unknown [Glycine max]
          Length = 139

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 69/108 (63%), Gaps = 12/108 (11%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L++ +I  G+ + DRTG GT S FG QMRF+L   FPLLTTKKV W+ VV ELLWF+
Sbjct: 11  YLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVEELLWFI 70

Query: 64  RGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQWR 99
            G +N   L   G+ IWD     E+ D       ++G+LGP+YG QWR
Sbjct: 71  SGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWR 118


>gi|253582886|ref|ZP_04860104.1| thymidylate synthase [Fusobacterium varium ATCC 27725]
 gi|251835092|gb|EES63635.1| thymidylate synthase [Fusobacterium varium ATCC 27725]
          Length = 276

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 118/254 (46%), Gaps = 20/254 (7%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWFLRGDSN-VSYLHRHGV 77
           D T    +S  GYQ R D S     L+TT+    K+ + EL W     SN V  L++   
Sbjct: 34  DGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPNKAPIRELYWIWIMQSNDVDELNKLKC 93

Query: 78  SIWDEWADKDGELGPIYGVQ-------WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
             WDEW   DG +G  YG Q       ++S  DY          ++  L+ +P SRR + 
Sbjct: 94  KFWDEWKMNDGTIGKAYGYQIAKQTFGYKSQLDY----------VIGELKKNPNSRRIMT 143

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
             W    +DKMAL PC  L Q+ V   KL  ++ QRS DV LG+  N+  YS+L  ++A 
Sbjct: 144 EIWVPEDLDKMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALGLVANVFQYSILHKLVAM 203

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
               +  E I  + +VH+Y+ H      Q+ R P      +   N   +  F+ +D  + 
Sbjct: 204 ECNLEPAEIIWNIHNVHIYDRHMPDLLEQIKR-PSIDGATVKIENFKSIYDFKPDDVVVE 262

Query: 251 SYEPHAAILAKVSV 264
           +Y+    I  +V++
Sbjct: 263 NYQYGEKISYEVAI 276


>gi|225868468|ref|YP_002744416.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus]
 gi|225701744|emb|CAW99116.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus]
          Length = 279

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 31/254 (12%)

Query: 19  RDRTGVGTRSTF--GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--H 73
           R + G    S +  G    +DLSKG FP+ T + +  KS + EL W  +  SN   +  +
Sbjct: 28  RYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEN 87

Query: 74  RHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIV 130
           ++ V  W+EW     E+G     Q R+     G ++   D IS I++ L  +P++RR+++
Sbjct: 88  KYNVHYWNEW-----EVG-----QTRTIGQRYGAIVKKHDIISKILKQLEDNPWNRRNVI 137

Query: 131 SAWNVAL--IDKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYS 182
           S W+     + +  LP   C FQ   D  ++  +LY      QRS D+ +    N   Y 
Sbjct: 138 SLWDYEAFEVSEGLLP---CAFQVMFDVRRVDGELYLDATLTQRSNDMLVAHHINAMQYV 194

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLL 240
            L +M+A   G++ G+F + + ++H+Y+N F QA   L R P    P+++++ P+  D  
Sbjct: 195 ALQLMIAKHFGWRAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKLLLHVPDGTDFF 254

Query: 241 SFRYEDFTLRSYEP 254
             R EDF L+ Y P
Sbjct: 255 DIRPEDFELQDYHP 268


>gi|21700303|gb|AAM75811.1|AF450268_1 bifunctional dihydrofolate reductase-thymidylate synthase
           [Amastigomonas debruynei]
          Length = 259

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 12/107 (11%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL+R V+  G +R DRTGVGT S FG ++ FDL  GFPLLTTK+V W+ V  ELLWF+
Sbjct: 148 YLDLIRRVLADGFERDDRTGVGTFSLFGEKLEFDLGDGFPLLTTKRVFWRGVAEELLWFV 207

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQW 98
            G +N + L   G+ IWD  + ++            G+LGP+YG QW
Sbjct: 208 SGSTNANELAAKGIRIWDGNSSREYLDSIGLTEREVGDLGPVYGFQW 254


>gi|33304368|gb|AAQ02622.1| thymidylate synthase [Hartmannella cantabrigiensis]
          Length = 136

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 13/111 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+++  +I+ G  + DRTGVGT S FG QMRF L  G FPLLTTK+V WK VV ELL
Sbjct: 11  YQYLEMIDDIIRHGVRKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWR 99
           WF+RGD+N + L + G  IWD     ++ D  G       +LGP+YG QWR
Sbjct: 71  WFIRGDTNGANLSKKGDKIWDANGSRQFLDSRGLTHREENDLGPVYGFQWR 121


>gi|33304362|gb|AAQ02618.1| thymidylate synthase [Hartmannella cantabrigiensis]
          Length = 136

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 13/111 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+++  +I+ G  + DRTGVGT S FG QMRF L  G FPLLTTK+V WK VV ELL
Sbjct: 11  YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWR 99
           WF+RGD+N + L + GV I D     ++ D  G       +LGP+YG QWR
Sbjct: 71  WFIRGDTNGANLSKKGVKICDANGSRQFLDSRGLTQREENDLGPVYGFQWR 121


>gi|222152932|ref|YP_002562109.1| thymidylate synthase [Streptococcus uberis 0140J]
 gi|222113745|emb|CAR41747.1| thymidylate synthase [Streptococcus uberis 0140J]
          Length = 279

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 25/263 (9%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTF--GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFL 63
           L+  V+   +  + + G    S +  G    +DLSKG FP+ T + +  KS + ELLW  
Sbjct: 16  LMDGVLSENARPKYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKELLWIY 75

Query: 64  RGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQS 118
           +  SN   +  +++ V  W++W     E+G    +  R      G ++   D ++ I++ 
Sbjct: 76  QDQSNSLDVLENKYNVHYWNDW-----EVGTTRTIGQRY-----GAIVKKHDIMTKILKQ 125

Query: 119 LRADPYSRRHIVSAWNV-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLG 173
           L  +P++RR+IVS W+  A  +   L PC    +F     NG+  L   L QRS D+ + 
Sbjct: 126 LSDNPWNRRNIVSLWDYEAFEESEGLLPCAFQTMFDVRRVNGEIYLDATLVQRSNDMLVA 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMII 232
              N   Y    MM+A   G++ G+F + + ++H+Y+N F QA+  L R      PQ+++
Sbjct: 186 HHINAMQYVAFQMMIAKHFGWKLGKFFYFVNNLHIYDNQFPQAEELLKREESDCHPQLVL 245

Query: 233 N-PNIVDLLSFRYEDFTLRSYEP 254
           N P+  +    R EDF L  Y P
Sbjct: 246 NVPDGTNFFDIRPEDFELLDYNP 268


>gi|327197801|ref|YP_004301499.1| gp165 [Brochothrix phage A9]
 gi|299810401|gb|ADJ53200.1| gp165 [Brochothrix phage A9]
          Length = 304

 Score =  106 bits (264), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 40/269 (14%)

Query: 3   QYLDLLRHVIKFGSDRRDR----TGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVH 57
           QYLD L  +   G D   R     G   R      M   L ++    L+ K V  K  + 
Sbjct: 6   QYLDGLFRIFDEGHDEPARGHYQDGTQARHLIIPSMEITLKAEETGRLSLKHVGAKDPIK 65

Query: 58  ELLW-FLRGDSNVSYLHRHGVSIWDE--WADKDGELGPIYGVQWRSWPDYDGNV------ 108
           E+LW + +  S+V+ L   G  +W+   W   +  + P YG Q        G        
Sbjct: 66  EMLWIYQKASSDVTELQEMGCKVWNNTAWHSSENNIAPAYGHQIAKITRVKGKTEQILAY 125

Query: 109 ----------------------IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
                                 ++Q+  ++  L  DP+S+R     WNV+ +D M LPPC
Sbjct: 126 QQAMYGVPIHDSLLPKAINTFKMNQMHRVIWDLVNDPHSKRIATELWNVSDLDDMVLPPC 185

Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206
               ++ V  GKL  ++ QRS D  +G+P+NI  + +L  M++   G   G+++H + +V
Sbjct: 186 VHRTEWSVIGGKLHLKVLQRSADYCVGVPYNIYQFDVLRRMVSVATGIPLGDYVHNMSNV 245

Query: 207 HLYNNH----FEQADLQLSRSPRTLPQMI 231
           H+Y+ H    FE A   +   P T P  I
Sbjct: 246 HIYDRHIPDAFEMAKTDVDSIPETKPVSI 274


>gi|195978199|ref|YP_002123443.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974904|gb|ACG62430.1| thymidylate synthase ThyA [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 279

 Score =  106 bits (264), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 29/253 (11%)

Query: 19  RDRTGVGTRSTF--GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--H 73
           R + G    S +  G    +DLSKG FP+ T + +  KS + EL W  +  SN   +  +
Sbjct: 28  RYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEN 87

Query: 74  RHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIV 130
           ++ V  W+EW     E+G     Q R+     G ++   D IS I++ L  +P++RR+++
Sbjct: 88  KYNVHYWNEW-----EVG-----QTRTIGQRYGAIVKKHDIISKILKQLEDNPWNRRNVI 137

Query: 131 SAWNV-ALIDKMALPPCHCLFQFYVDNGKLSCQLY------QRSGDVFLGIPFNIASYSL 183
           S W+  A  +   L PC   FQ   D  ++  +LY      QRS D+ +    N   Y  
Sbjct: 138 SLWDYEAFEESEGLLPC--AFQVMFDVRRVDGELYLDATLTQRSNDMLVAHHINAMQYVA 195

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLS 241
           L +M+A   G++ G+F + + ++H+Y+N F QA   L R P    P+++++ P+      
Sbjct: 196 LQLMIAKHFGWRAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKLLLHVPDGTAFFD 255

Query: 242 FRYEDFTLRSYEP 254
            R EDF L+ Y P
Sbjct: 256 IRPEDFELQDYHP 268


>gi|315221690|ref|ZP_07863606.1| thymidylate synthase [Streptococcus anginosus F0211]
 gi|315189177|gb|EFU22876.1| thymidylate synthase [Streptococcus anginosus F0211]
          Length = 279

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 23/256 (8%)

Query: 14  FGSDRRDRTGVG----TRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN 68
           F  + R R   G    ++   G    +DLSKG FP+ T + +  KS + E+LW  +  SN
Sbjct: 21  FSENARPRYKNGKVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSN 80

Query: 69  VSYL--HRHGVSIWDEWADKDGE-LGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYS 125
              +   ++ V  W++W   D   +G  YG   +          D I+ I++ L  +P++
Sbjct: 81  SLDILEEKYNVHYWNDWEVGDTRTIGLRYGAVVKKH--------DIINKILKQLEINPWN 132

Query: 126 RRHIVSAWNV-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIAS 180
           RR+I+S W+  A  +   L PC    +F     +G   L   L QRS D+ +    N   
Sbjct: 133 RRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQ 192

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVD 238
           Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++++N P+  +
Sbjct: 193 YVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAKELLRREPTNCTPRLVLNVPDGTN 252

Query: 239 LLSFRYEDFTLRSYEP 254
               + E F L  Y+P
Sbjct: 253 FFDIKAEYFELVDYDP 268


>gi|255019274|ref|ZP_05291400.1| thymidylate synthase [Listeria monocytogenes FSL F2-515]
          Length = 78

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 47/75 (62%), Positives = 61/75 (81%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1  MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61 WFLRGDSNVSYLHRH 75
          WFL GD+N+ YL +H
Sbjct: 61 WFLHGDTNIRYLLQH 75


>gi|21700315|gb|AAM75817.1|AF450274_1 bifunctional dihydrofolate reductase-thymidylate synthase
           [Tetrahymena sp.]
          Length = 311

 Score =  105 bits (261), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 13/109 (11%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL++ V+  G  R DRTG GT S FG  MRFDLS G FPLLTTKK   + +  EL W
Sbjct: 198 QYLDLVQRVVSTGVSRGDRTGTGTLSIFGAMMRFDLSSGAFPLLTTKKTFLRGIAEELFW 257

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQW 98
           FL+GD++ + L    V IWD  A +            +G+LGP+YG QW
Sbjct: 258 FLKGDTSQTRLAAKDVHIWDANATRAFLDARGLPDRPEGDLGPVYGCQW 306


>gi|332975814|gb|EGK12693.1| thymidylate synthase [Psychrobacter sp. 1501(2011)]
          Length = 102

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 65/95 (68%)

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           +FLG+PFNIASYSLLT M+A V   + GEFI T GD HLY NH EQ + QLSR    LP 
Sbjct: 8   IFLGVPFNIASYSLLTHMIAQVCDLEVGEFIWTGGDCHLYQNHIEQVNEQLSREAYELPT 67

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + +NP+I D+  F ++D  + +Y+ H AI A V+V
Sbjct: 68  LWLNPDIKDIFDFTFDDIRVENYKSHPAIKAPVAV 102


>gi|115299486|gb|ABI93713.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
 gi|115299492|gb|ABI93716.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
          Length = 95

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 64/95 (67%), Gaps = 8/95 (8%)

Query: 92  PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN + + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           PPCH + QF+V NGKLSC +YQRS D  LGIPFNI
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95


>gi|115299484|gb|ABI93712.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
          Length = 95

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 64/95 (67%), Gaps = 8/95 (8%)

Query: 92  PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN + + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDCQSDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           PPCH + QF+V NGKLSC +YQRS D  LGIPFNI
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95


>gi|115299490|gb|ABI93715.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
          Length = 95

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 8/95 (8%)

Query: 92  PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN   + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDRQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           PPCH + QF+V NGKLSC +YQRS D  LGIPFNI
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95


>gi|115299488|gb|ABI93714.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
          Length = 95

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 8/95 (8%)

Query: 92  PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN   + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           PPCH + QF+V NGKLSC +YQRS D  LGIPFNI
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95


>gi|295099624|emb|CBK88713.1| Thymidylate synthase [Eubacterium cylindroides T2-87]
          Length = 231

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 30/216 (13%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L  +++  G    +RTG+ T        + ++ + FP+LTTK++  +  V E+LW  
Sbjct: 8   YCQLCENILTNGVQVANRTGIDTIKLPSAHFQLNVGEEFPILTTKQLFIRQAVLEMLWIY 67

Query: 64  RGDSN-VSYLHRHGVSIWDEWA---------DKDGE------------LGPIYGVQWRSW 101
           +  SN V +L    V IWD W          +K GE            +G  YG      
Sbjct: 68  QAQSNDVRWLQERNVHIWDLWQIDENGDWRDEKTGEVLKHFDPKFANTIGTAYG------ 121

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             Y       +  ++ SL+ +   RR ++S W    +D   LP C    ++ V NG L+ 
Sbjct: 122 --YIVKRFKLMDRLIDSLKNNVNDRRRVISLWQDEYLDTAVLPSCVWSSEWDVTNGTLNA 179

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
            ++QRS DV LG+PFN+  Y++L  MLA V G + G
Sbjct: 180 WVHQRSCDVPLGLPFNVTQYAVLLKMLAQVTGLKAG 215


>gi|326536756|ref|YP_004301187.1| Td thymidylate synthetase [Aeromonas phage 65]
 gi|312263102|gb|ADQ53358.1| Td thymidylate synthetase [Aeromonas phage 65]
          Length = 313

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 19/252 (7%)

Query: 3   QYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +Y +L+ +V   G+D    RTG   R+   + M +D     P+++ K+V +K  + E + 
Sbjct: 35  EYYNLVHYVYNHGTDIFNKRTGFVCRTIPTHVMVYDRC---PMISHKQVFFKMFIAEFIG 91

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDGNVI 109
           +LRG ++       G   WD  A++            + ++G +YG   R +    G   
Sbjct: 92  YLRGYTSAKQFRDLGTRTWDANANETKAWLINPNRKGEDDMGNVYGSIARDFG-AKGGQY 150

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           D +  + + L+    +R  I++ W+ +  D+  L PC  + QF +    L    YQRS D
Sbjct: 151 DLLWDVYEDLQKGIDNRGEIITFWDPSRFDEGCLRPCMMMHQFQLIGDTLHLTSYQRSTD 210

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-- 227
           + LG P N+        ++A + G + G+  H + ++H+Y N FE  +  L+R P T+  
Sbjct: 211 ILLGGPANMLQAWFFLELMARITGHKIGKVTHVMNNIHIYENQFESCEEFLNRVPHTMNN 270

Query: 228 PQMIINPNIVDL 239
           P ++ +   VDL
Sbjct: 271 PSLVFDDKCVDL 282


>gi|115299502|gb|ABI93721.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
 gi|115299510|gb|ABI93725.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
          Length = 96

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 8/96 (8%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +L P+YG QWR +         DY+   +DQ+  ++Q L+ +P SRR I+SAWN + + +
Sbjct: 1   DLDPVYGFQWRHFGAEYKDCQSDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQ 60

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           MALPPCH + QF+V NGKLSC +YQRS D  LGIPF
Sbjct: 61  MALPPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPF 96


>gi|115299512|gb|ABI93726.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
          Length = 93

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 8/93 (8%)

Query: 92  PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY+   +DQ+  ++Q L+ +P SRR I+SAWN + +++MAL
Sbjct: 1   PVYGYQWRHFGAEYKDCQSDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLEQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           PPCH + QF+V NGKLSC +YQRS D+ LGIPF
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQRSCDLGLGIPF 93


>gi|225734443|gb|ACO25211.1| thymidylate synthase [Epizootic haematopoietic necrosis virus]
          Length = 95

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 62/93 (66%)

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASYSLLT M+A V G + GEF+H LGD H+Y ++ E    QL R PR  P + 
Sbjct: 3   LGVPFNIASYSLLTYMMAHVTGLEPGEFVHNLGDAHVYLDNVEPLKTQLEREPRPFPTLR 62

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           IN  +  L  F+ EDF+L  Y+PH AI  +++V
Sbjct: 63  INRRVESLDDFKAEDFSLEGYDPHPAIRMRMAV 95


>gi|238602652|ref|XP_002395739.1| hypothetical protein MPER_04156 [Moniliophthora perniciosa FA553]
 gi|215466985|gb|EEB96669.1| hypothetical protein MPER_04156 [Moniliophthora perniciosa FA553]
          Length = 110

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 1/108 (0%)

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           KLSC +YQRS D+ LGIPFNIASY+LL  M+A V G +  E I  LGD H+Y +H +   
Sbjct: 3   KLSCLMYQRSADLGLGIPFNIASYALLVHMMAQVTGTEPHELIIQLGDAHVYRDHVDALK 62

Query: 218 LQLSRSPRTLPQMI-INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            QL R PR  P++      I D+  F Y DF +  Y+P+ +I  K+SV
Sbjct: 63  TQLEREPRPFPKLKWAREGINDIEDFVYSDFVVEGYDPYPSIPMKMSV 110


>gi|45686030|ref|YP_003793.1| thymidylate synthase [Ambystoma tigrinum virus]
 gi|37722454|gb|AAP33199.1| thymidylate synthase [Ambystoma tigrinum stebbensi virus]
          Length = 95

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 61/93 (65%)

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
            G+PFNIASY LLT M+A V G + GEF+HTLGD H+Y +H E    QL R PR  P + 
Sbjct: 3   FGVPFNIASYFLLTYMMAYVTGLEPGEFVHTLGDAHVYLDHVEPLKTQLEREPRPFPTLR 62

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           IN  +  L  F+ EDF+L  Y+PH AI  +++V
Sbjct: 63  INRRVESLDDFKAEDFSLEGYDPHPAIRMRMAV 95


>gi|167837402|ref|ZP_02464285.1| thymidylate synthase [Burkholderia thailandensis MSMB43]
          Length = 193

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 13/171 (7%)

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY--VDNGKLSCQLY 164
             IDQ+   + ++  DP SRR +   WN A++D++ALP CH L+QF   V+  ++S  LY
Sbjct: 23  KAIDQLRDCLDTIVRDPSSRRILFHGWNPAVLDEIALPACHLLYQFLPNVERREISLCLY 82

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
            RS DV LG PFN+A  + L  ++  + G+    F + +GD H+Y N  +    QL R P
Sbjct: 83  IRSNDVGLGTPFNLAEGAALLTLVGRLTGYTPRWFTYFIGDAHIYENQLDMLKQQLEREP 142

Query: 225 RTLPQMIINPNIVD-----------LLSFRYEDFTLRSYEPHAAILAKVSV 264
              P++ I   + D           L      DF L  Y  H  + A ++V
Sbjct: 143 FESPRLEIAERVPDYAKTGEYEPQWLERIEPSDFALVGYRHHEPLTAPMAV 193


>gi|115299496|gb|ABI93718.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           primaurelia]
          Length = 93

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 8/93 (8%)

Query: 92  PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN   I +MAL
Sbjct: 1   PVYGFQWRHFGAQYKDCQSDYTNQGVDQVKEIIQQLKNNPDSRRIILSAWNPMDIKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           PPCH + QF+V NGKL+C +YQRS D  LGIPF
Sbjct: 61  PPCHVMSQFFVSNGKLNCMMYQRSCDFGLGIPF 93


>gi|225075851|ref|ZP_03719050.1| hypothetical protein NEIFLAOT_00874 [Neisseria flavescens
           NRL30031/H210]
 gi|224952797|gb|EEG34006.1| hypothetical protein NEIFLAOT_00874 [Neisseria flavescens
           NRL30031/H210]
          Length = 309

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 29/257 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY+ LL+ ++     R +RTG    +    Q     +  FP LT ++ +WKS V E+L 
Sbjct: 21  QQYVQLLKDLLDAPLVRNERTGTACHTIINPQSFTYTADDFPALTIRRSYWKSAVAEMLG 80

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVI 109
           ++RG ++       G   WD  A+++             ++G +YG    S+        
Sbjct: 81  YIRGYTSAKDFRELGTKTWDANANQNPAWLANPHRAGVDDMGLVYGAVGNSFTGL----- 135

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
              + I++++ A   +R  I S WN  + DK  L PC    QF + NG L     QRS D
Sbjct: 136 -SFTDIMRAIHARQDNRGLIWSFWNPDVFDKGCLRPCMYSHQFSIVNGTLYLTSTQRSCD 194

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           V LG+ FN+     L  ++ ++ G ++G   H + + H+Y N  +            + +
Sbjct: 195 VPLGLTFNMIQCWFLLYLVCTLTGLKFGHARHNIVNAHIYENQVD-----------AVRE 243

Query: 230 MIINPNIVDLLSFRYED 246
           MI NP +   + F++ D
Sbjct: 244 MIANPLLPRSIKFQHVD 260


>gi|21700305|gb|AAM75812.1|AF450269_1 bifunctional dihydrofolate reductase-thymidylate synthase [cf.
           'Cafeteria' marsupialis 'Wood's Hole']
          Length = 268

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 67/109 (61%), Gaps = 13/109 (11%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61
           QYL+ +R ++  G DR DRTG GT S FG  MRF L     PL+TTKKV W+ VV ELLW
Sbjct: 155 QYLNAIRDILDNGVDRSDRTGTGTLSKFGLHMRFSLRDNTLPLITTKKVFWRGVVEELLW 214

Query: 62  FLRGDSNVSYLHRHGVSIWD-----EWAD-------KDGELGPIYGVQW 98
           F+RG ++   L   GV IWD     E+ D       ++G+LGP+YG QW
Sbjct: 215 FVRGFTDSKLLSAKGVHIWDGNGSREYLDSRGLFHNEEGDLGPVYGFQW 263


>gi|21700313|gb|AAM75816.1|AF450273_1 bifunctional dihydrofolate reductase-thymidylate synthase
           [Diplonema ambulator]
          Length = 255

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 66/110 (60%), Gaps = 13/110 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDL+  +IK G  + DRTGVGT S FG QMRF L  G  PLLTTK+V WK V  EL 
Sbjct: 141 QQYLDLVDDIIKNGFTKGDRTGVGTISKFGAQMRFSLRDGVIPLLTTKRVFWKGVAEELF 200

Query: 61  WFLRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQW 98
           WF++G +N   L   GV IWD      + D  G       +LGPIYG+QW
Sbjct: 201 WFIKGCTNGKDLKDKGVHIWDGNGTRAFLDSRGLPDRAEDDLGPIYGLQW 250


>gi|15193286|gb|AAK91762.1|AF406763_2 thymidylate synthase [Streptococcus thermophilus]
          Length = 268

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 16/242 (6%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN-VSYLH-RH 75
           +D T   ++   G    +DLSKG FP+ T + +  KS + E+    +  +N +  L  ++
Sbjct: 30  KDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVXXXXQDQTNSLDVLEDKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W++W   + E  P      RS     G V+   D I+ ++  L A+P++RR+++S 
Sbjct: 90  NVHYWNDW---EVEGVPANNGDKRSIGQRYGAVVKKHDIINRLLAQLEANPWNRRNVISL 146

Query: 133 WNVALIDKMA-LPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+   +++ A L PC     F V    ++  L   L QRS D+ +    N   Y  L MM
Sbjct: 147 WDYEALEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSNDMLVAHHINAMQYVALQMM 206

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++++N P+  +    + E
Sbjct: 207 IAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQPRLVLNVPDETNFFDIKPE 266

Query: 246 DF 247
           D 
Sbjct: 267 DI 268


>gi|21700309|gb|AAM75814.1|AF450271_1 bifunctional dihydrofolate reductase-thymidylate synthase
           [Chlamydaster sterni]
          Length = 260

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 65/111 (58%), Gaps = 13/111 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFD-LSKGFPLLTTKKVHWKSVVHELL 60
            QYLDL+  +I  G+ R DRTG GT S FG QMRF       PLLTTKKV W+ V  E+L
Sbjct: 146 KQYLDLVDRIITSGTQRGDRTGTGTLSIFGTQMRFSPRDDTLPLLTTKKVFWRGVAEEML 205

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWR 99
           WF++G ++   L    + IWD+ A +            +G+LGP+YG QWR
Sbjct: 206 WFMKGCTDARVLSAKKIHIWDDNASRKFLDENGLSHREEGDLGPVYGFQWR 256


>gi|13022108|gb|AAK11643.1| thymidylate synthetase [Babesia bovis]
          Length = 109

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 22/109 (20%)

Query: 94  YGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV---------- 135
           YG QWR +         DY G  IDQ++ I+  ++ +P  R  IV +WNV          
Sbjct: 1   YGFQWRHFGAEYLDMHADYTGKGIDQLAEIINRIKTNPNDRMLIVCSWNVSGGFLFSPFF 60

Query: 136 ----ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               A + KMALPPCHC FQFYV + KLSC ++QRS D+ LG+PFNIAS
Sbjct: 61  TIMFADLKKMALPPCHCFFQFYVSDNKLSCMMHQRSCDLGLGVPFNIAS 109


>gi|82592529|sp|P0C0M4|TYSY_STAEP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|886709|emb|CAA88268.1| thymidylate synthase [Staphylococcus epidermidis]
          Length = 97

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 1/98 (1%)

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S D+FLG+PFNIASY+LLT ++A   G + GEFIHT GD H+Y+NH +    QLSR    
Sbjct: 1   SADIFLGVPFNIASYALLTHLVAKECGLEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYL 60

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PQ+ IN +   +    YED  L +YE H AI A ++V
Sbjct: 61  PPQLKINTD-KSIFDINYEDLELINYESHPAIKAPIAV 97


>gi|2160270|dbj|BAA03157.1| thymidylate synthase [Methylobacillus glycogenes]
          Length = 64

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 53/64 (82%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M  Y DL+RHV++ G  + DRTG GT S FGYQMRFDL++GFPLLTTKKVH KS++HELL
Sbjct: 1  MKVYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAEGFPLLTTKKVHLKSIIHELL 60

Query: 61 WFLR 64
          WFL+
Sbjct: 61 WFLQ 64


>gi|998793|gb|AAB34157.1| thymidylate synthase [Pneumocystis carinii]
          Length = 99

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 14/99 (14%)

Query: 93  IYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144
           IYG QWR +         +Y G  +DQ+++I+Q +R  PY RR I+SAWN A ++KMALP
Sbjct: 1   IYGFQWRHFGAEYIDCKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALP 60

Query: 145 PCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFN 177
           PCH   QFYV         +LSCQLYQRS D+ LG+PFN
Sbjct: 61  PCHMFCQFYVHIPSNNHRPELSCQLYQRSCDMGLGVPFN 99


>gi|254490265|ref|ZP_05103454.1| thymidylate synthase [Methylophaga thiooxidans DMS010]
 gi|224464398|gb|EEF80658.1| thymidylate synthase [Methylophaga thiooxydans DMS010]
          Length = 194

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 14/190 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I+ G      RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MRQYLDLCQRIIEHGEWVENTRTGKRCLTVINADLEYDVAANQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           +L +LRG  N +     G   WD  A+          + GE  +G +YGVQ R W   DG
Sbjct: 61  MLGYLRGYDNAADFRAIGCKTWDANANANQDWLNNPHRKGEDDMGRVYGVQGRRWQKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  I   L      R  I++ +N    D   L PC     F V    L    YQR
Sbjct: 121 TPLDQLQKIADHLAQGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSVLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPF 176
           S DV LG+ F
Sbjct: 181 SCDVPLGLNF 190


>gi|115299498|gb|ABI93719.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           primaurelia]
          Length = 93

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 8/93 (8%)

Query: 92  PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN   + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           PPCH + QF+V NGKLSC +YQ S D  LGIPF
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQSSCDFGLGIPF 93


>gi|115299494|gb|ABI93717.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           primaurelia]
          Length = 93

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 8/93 (8%)

Query: 92  PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         +Y    +DQ+  I+Q L+ +P SRR I+SAWN + + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDCQSEYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           PPCH + Q +V NGKLSC +YQRS D  LGIPF
Sbjct: 61  PPCHVMSQSFVANGKLSCMMYQRSCDFGLGIPF 93


>gi|213026353|ref|ZP_03340800.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 91

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 59/91 (64%)

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +PFNIASY+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I 
Sbjct: 1   MPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 60

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                L  +R++DF +  Y+PH  I A V++
Sbjct: 61  RKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 91


>gi|332523709|ref|ZP_08399961.1| thymidylate synthase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314973|gb|EGJ27958.1| thymidylate synthase [Streptococcus porcinus str. Jelinkova 176]
          Length = 279

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 23/249 (9%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    ++L++  FP+ T + +  KS + ELLW  +  SN   +   ++
Sbjct: 30  KDGQTANSKYLTGVFTEYNLAEDDFPITTLRPIPIKSAIKELLWIYQDQSNSLDVLEEKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W++W     E+G    +  R      G V+   D ++ I++ L  +P++RR+++S 
Sbjct: 90  NVHYWNDW-----EVGNTRTIGQRY-----GAVVKKHDIMTKILKQLADNPWNRRNVISL 139

Query: 133 WNV-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+  A  +   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM
Sbjct: 140 WDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLVQRSNDMLVAHHINAMQYVALQMM 199

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN-PNIVDLLSFRYE 245
           +A    ++ G+F + + ++H+Y+N F QA+  LSR      P++++N P+  D      E
Sbjct: 200 IAKHFSWKIGKFFYFVNNLHIYDNQFSQAEELLSREASNCKPRLVLNVPDGTDFFDICAE 259

Query: 246 DFTLRSYEP 254
           DF L  Y P
Sbjct: 260 DFELVDYNP 268


>gi|56755327|gb|AAW25843.1| unknown [Schistosoma japonicum]
          Length = 111

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 65/93 (69%)

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LGIPFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E    Q+ R+PR  P++ 
Sbjct: 19  LGIPFNIASYALLTYMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKRTPRPFPKLE 78

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           I   + ++  F++EDF L  Y+P+  +  K+++
Sbjct: 79  IVREVENIDDFKFEDFKLIDYKPYPKLSMKMAL 111


>gi|313890613|ref|ZP_07824241.1| thymidylate synthase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121130|gb|EFR44241.1| thymidylate synthase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 279

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 23/249 (9%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRH 75
           +D     ++   G    ++L++G FP+ T + +  KS + ELLW  +  SN   +   ++
Sbjct: 30  KDGQTANSKYLTGVFAEYNLAEGDFPITTLRPIPIKSAIKELLWIYQDQSNSLDVLEEKY 89

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISSIVQSLRADPYSRRHIVSA 132
            V  W +W     E+G    +  R      G V+   D ++ I++ L  +P++RR+++S 
Sbjct: 90  NVHYWKDW-----EVGNTRTIGQRY-----GAVVKKHDIMTKILKQLADNPWNRRNVISL 139

Query: 133 WNV-ALIDKMALPPC--HCLFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           W+  A  +   L PC    +F     +G   L   L QRS D+ +    N   Y  L MM
Sbjct: 140 WDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLVQRSNDMLVAHHINAMQYVALQMM 199

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR-SPRTLPQMIIN-PNIVDLLSFRYE 245
           +A    ++ G+F + + ++H+Y+N F QA+  L+R +    P +++N P+  +      E
Sbjct: 200 IAKHFSWKVGKFFYFVNNLHIYDNQFSQAEELLNREASHCQPHLVLNVPDGTNFFDIGVE 259

Query: 246 DFTLRSYEP 254
           DF L  Y+P
Sbjct: 260 DFELVDYDP 268


>gi|91785563|ref|YP_560769.1| thymidylate synthase [Burkholderia xenovorans LB400]
 gi|91689517|gb|ABE32717.1| thymidylate synthase [Burkholderia xenovorans LB400]
          Length = 354

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 111/219 (50%), Gaps = 15/219 (6%)

Query: 6   DLLRHVI-----KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           DLLR V      K GSD  + T        G  +     +     + KK    S + E L
Sbjct: 10  DLLRKVYGRLLRKRGSDDINPTKGPATEINGALLVLKKPRARLSQSEKKNTLFSCLGEFL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W+L G   + ++  + +S + +++D    +   YG   R +    G   DQ+ +++Q+LR
Sbjct: 70  WYLAGSDKLDFIQYY-ISRYKDFSDDGKTVFGAYGP--RLFGPTSG--TDQVQNVIQTLR 124

Query: 121 ADPYSRRHIVSAWN-----VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
           A+ +SRR ++  ++       L+ +    PC C  QF++ N +L+  +  RS D F+G+P
Sbjct: 125 ANQHSRRAVIQLFHGDDLAANLVKRREDLPCTCTLQFFIRNYQLNAMVTMRSNDAFMGLP 184

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
            +I ++++L  ++A  +G + G++ H +G +HLY N+ +
Sbjct: 185 HDIFAFTMLQELIARSLGVEVGQYKHAVGSLHLYANNTQ 223


>gi|169836331|ref|ZP_02869519.1| thymidylate synthase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 78

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/77 (57%), Positives = 51/77 (66%)

Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
           IV AWN        LPPCH  F F V   KL+C L QRSGD+ LGIPFN+A YSLLTMM+
Sbjct: 2   IVLAWNPGNATISKLPPCHYTFAFNVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMI 61

Query: 189 ASVIGFQYGEFIHTLGD 205
           A   G++ GEF HT+ D
Sbjct: 62  AKECGYEAGEFAHTIID 78


>gi|167837403|ref|ZP_02464286.1| thymidylate synthase [Burkholderia thailandensis MSMB43]
          Length = 124

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 12/116 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGAWKSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGE------------LGPIYGVQWRSWPDY 104
            FLR   + +     G  +WD  A+++ +            LG +YGVQWR WP Y
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGY 116


>gi|322511194|gb|ADX06507.1| putative bifunctional dihydrofolate reductase-thymidylate synthase
           [Organic Lake phycodnavirus 2]
          Length = 115

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           QF+V   KLSC LYQRSGD+ LG+PFNI SYS LT ++A     +  EFI+ +G+ H+Y+
Sbjct: 2   QFHVVENKLSCSLYQRSGDLGLGVPFNILSYSALTHLIAHHCHLEASEFIYHIGNAHVYD 61

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
           +H +   +Q+ + P    ++ IN +  ++  +   DF + +Y+ H ++  K+
Sbjct: 62  DHLDALLVQVEKEPYEFSKVTINNHYDNISDYGINDFDITNYKSHDSVSLKM 113


>gi|222873482|gb|EEF10613.1| predicted protein [Populus trichocarpa]
          Length = 57

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/57 (64%), Positives = 49/57 (85%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
          M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDL++GFP++TTKK+H KS++H
Sbjct: 1  MKQYLDFMRHVYEHGTEKSDRTGTGTRSVFGYQMRFDLNEGFPVVTTKKLHLKSIIH 57


>gi|12055931|emb|CAC20646.1| putative thymidylate synthase [Lactobacillus sakei]
          Length = 70

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 49/64 (76%)

Query: 21 RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIW 80
          RT  GT S FGYQMRF+L +GFPLLTTKK+ +  +  ELLWFL+GDSN+ YL +H   IW
Sbjct: 1  RTNTGTYSLFGYQMRFNLQEGFPLLTTKKMPFGLIKSELLWFLKGDSNIRYLLQHNNHIW 60

Query: 81 DEWA 84
          DEWA
Sbjct: 61 DEWA 64


>gi|325661465|ref|ZP_08150091.1| hypothetical protein HMPREF0490_00825 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472414|gb|EGC75626.1| hypothetical protein HMPREF0490_00825 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 295

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 34/245 (13%)

Query: 36  FDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKD--GEL 90
           +DLSKG FP+ T + + WKS + E+ W  +  SN   +  +++ +  W++W  KD    +
Sbjct: 48  YDLSKGEFPINTLRPIPWKSAIKEIFWIYQEASNNLEILNNKYNIKYWNDWQSKDVPNTI 107

Query: 91  GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA-LIDKMALPPCHCL 149
           G  YG   + +        D + ++++S+  DP+ R  I++ W    L +   L PC  L
Sbjct: 108 GQRYGATVKRY--------DLVKNLIKSINEDPFGRHKIMNLWQEKDLQETDGLLPCAFL 159

Query: 150 FQFYVD---NGK--LSCQLYQRSGDVFL---GIPFNIASYSLLTMMLASVIGFQYGEFIH 201
             + V     GK  L   L QRSGD+     G   N   Y+ L MM+A       G F+H
Sbjct: 160 TMWSVRKNLEGKNFLDMTLIQRSGDMLAASGGGGVNEVQYAALLMMIARHCDLLPGVFVH 219

Query: 202 TLGDVHLYNNHFEQADLQLSR------------SPRTLPQMIINPNIVDLLSFRYEDFTL 249
            + +  +Y+ H +QA     R                +P +++     D  S   +DF +
Sbjct: 220 FVQNEQIYDRHIDQAGEMRRRYINMTMDEFYHEYEHKVPMLVLKDEAKDFYSMTIDDFEM 279

Query: 250 RSYEP 254
             YEP
Sbjct: 280 IDYEP 284


>gi|90580569|ref|ZP_01236374.1| thymidylate synthase [Vibrio angustum S14]
 gi|90438227|gb|EAS63413.1| thymidylate synthase [Photobacterium angustum S14]
          Length = 187

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 14/186 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLALCQRIVDDGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+          + GE  +G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDNAAQFRAIGCNTWNANANDNQAWLNNPHRKGEDDMGRVYGVQGRRWQKSDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFL 172
           S DV L
Sbjct: 181 SCDVPL 186


>gi|115299500|gb|ABI93720.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           primaurelia]
          Length = 93

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 8/93 (8%)

Query: 92  PIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY     DQ+  I+QSL+ +P SRR I+SA N     +M+L
Sbjct: 1   PVYGFQWRHFGAKYKDCQTDYSNQGADQVKGIIQSLKNNPDSRRIILSARNPIDFKQMSL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           PPCH + QF+V NGKL    YQRS D  LGIPF
Sbjct: 61  PPCHVMSQFFVANGKLIRMTYQRSCDFGLGIPF 93


>gi|414442|gb|AAC43192.1| Homologous to Swiss-Prot Accession Number P13954, thymidylate
           synthetase [Mycoplasma genitalium]
          Length = 95

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+FLG+PFNIASY+LL  ++A     + G FIHTLGD H+Y NH EQ  LQL+R+    P
Sbjct: 1   DIFLGVPFNIASYALLVYLVAHETKLKPGYFIHTLGDAHIYENHIEQIKLQLTRTTLDPP 60

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Q+++  +   + ++ ++D  L  Y  H  I  +V+V
Sbjct: 61  QVVLKSD-KSIFAYSFDDIELVGYNYHPFIYGRVAV 95


>gi|240276635|gb|EER40146.1| thymidylate synthase [Ajellomyces capsulatus H143]
          Length = 209

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 27/121 (22%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46
           HQYL L+R +++ G  R DRTG GTRS F   Q+RF LSK                PLLT
Sbjct: 47  HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+Y
Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166

Query: 95  G 95
           G
Sbjct: 167 G 167


>gi|83747574|ref|ZP_00944611.1| Deoxyuridylate hydroxymethyltransferase [Ralstonia solanacearum
           UW551]
 gi|83725754|gb|EAP72895.1| Deoxyuridylate hydroxymethyltransferase [Ralstonia solanacearum
           UW551]
          Length = 352

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 97/178 (54%), Gaps = 15/178 (8%)

Query: 46  TTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD 105
           T ++    S + E LW+L G + +S++  + +S +DE++D    +   YG +      ++
Sbjct: 53  TEQRSTLFSCLGEFLWYLAGSNELSFIQYY-ISRYDEFSDDGNTVHGAYGPRL-----FN 106

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWN-------VALIDKMALPPCHCLFQFYVDNGK 158
              ++Q+S++++ L  +  +RR ++  +N       VA+  K    PC C  QF +   +
Sbjct: 107 MRGVNQVSNVIEKLSGNNDTRRAVIQLFNAEDLGCDVAVGRKDI--PCTCTMQFSLRARQ 164

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           L   +  RS D +LG+P +I ++++L  ++A  +G + G + H +G +HLY+ + +QA
Sbjct: 165 LHMFVTMRSNDAYLGLPHDIFAFTMLQEIVARAVGAELGTYKHAVGSLHLYSKNTDQA 222


>gi|182678521|ref|YP_001832667.1| thymidylate synthase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634404|gb|ACB95178.1| thymidylate synthase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 342

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 11/202 (5%)

Query: 21  RTGVGTRST----FGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHG 76
           RT  G+R       G  +R    +     +  +    S + ELLW+L G   ++++  + 
Sbjct: 24  RTNAGSRGNTVELLGVALRILKPRARISRSENRGKPFSAIGELLWYLSGLDTLAFIEPYV 83

Query: 77  VSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA 136
            +  D+     G +   YG + R+  D     IDQ +SI   LR  P SRR ++  +N  
Sbjct: 84  SAYRDDAVA--GVIQGAYGPRLRAMRD----GIDQFASIETLLRQKPNSRRAVIQLFNAE 137

Query: 137 -LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
            +  +    PC    QF++ +G L   +  RS D + G+P ++  ++++  M+A  +G +
Sbjct: 138 DIATEHKEIPCTTTLQFHLRDGLLHMSVTMRSNDAYWGLPHDVFCFTMIQEMMARRLGVE 197

Query: 196 YGEFIHTLGDVHLYNNHFEQAD 217
            GE+ H +G +H+Y  H    D
Sbjct: 198 LGEYYHYVGSMHVYEKHLNHLD 219


>gi|152002544|dbj|BAF73568.1| thymidylate synthase [Onion yellows phytoplasma OY-W]
          Length = 79

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/79 (44%), Positives = 53/79 (67%)

Query: 186 MMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYE 245
           MM+A V   Q  EFIHTLGD H+Y+NH  Q   Q+ R+P+ LPQMI+NP+I ++  F++ 
Sbjct: 1   MMVAQVTNLQSYEFIHTLGDAHIYSNHLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFI 60

Query: 246 DFTLRSYEPHAAILAKVSV 264
            FTL++Y+    +   ++V
Sbjct: 61  YFTLQNYQCDGILKGDIAV 79


>gi|302556579|ref|ZP_07308921.1| thymidylate synthase [Streptomyces griseoflavus Tu4000]
 gi|302474197|gb|EFL37290.1| thymidylate synthase [Streptomyces griseoflavus Tu4000]
          Length = 316

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 100/184 (54%), Gaps = 15/184 (8%)

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            V E +W L G S+  ++  +   +  ++AD+   LG  YG + R+W       +DQ++ 
Sbjct: 64  AVAETVWHLSG-SDAPWIFDYNNRL-RQFADEGVLLG-AYGPRMRNW----AGKVDQLAR 116

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALP--PCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
           +++ L+ADP SRR ++  ++ A  D       PC   F+F++  G+L      R  DV++
Sbjct: 117 VIEILQADPDSRRALIQLYDPAQ-DAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWI 175

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G+P+++  Y++L  ++A  +  + GEF   +G +H+Y+ H EQAD+  S     LP   I
Sbjct: 176 GMPYDVFFYTVLHELVAGWLDAELGEFHLHIGSLHIYDEHIEQADMLTS-----LPASEI 230

Query: 233 NPNI 236
            P++
Sbjct: 231 MPDL 234


>gi|90420526|ref|ZP_01228433.1| possible thymidylate synthase [Aurantimonas manganoxydans SI85-9A1]
 gi|90335254|gb|EAS49007.1| possible thymidylate synthase [Aurantimonas manganoxydans SI85-9A1]
          Length = 338

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 10/216 (4%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           +HQ Y D+ +H  + G   R     GT    G  +R    +     +  +    S + EL
Sbjct: 12  LHQLYQDIDKHGRQHGGGTRGNKLGGTVELLGVALRITNPRARISRSENRGKPFSALGEL 71

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           LW+L G + ++++  + VS ++  A  DG L   YG ++ +        IDQ  SI + L
Sbjct: 72  LWYLSGSNKLTFIKPY-VSEYENDA-VDGVLEGAYGPRFLAM----RGEIDQFDSIERLL 125

Query: 120 RADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
           R  P SRR +V  +N   I  D   +P C    QF++  G+L   +  RS D + G+P +
Sbjct: 126 RRKPGSRRAVVQLFNAEDIATDHKEIP-CTTTLQFHLREGRLHLSVTLRSNDAYWGLPHD 184

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           +  ++++  M+A  +  + GE+   +G +H+Y+ + 
Sbjct: 185 VFCFTMIQEMMARRLEAELGEYYQYVGSMHVYDKYL 220


>gi|167645964|ref|YP_001683627.1| thymidylate synthase [Caulobacter sp. K31]
 gi|167348394|gb|ABZ71129.1| thymidylate synthase [Caulobacter sp. K31]
          Length = 367

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 11/186 (5%)

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV 108
           K H  S + E +W++   + +  +  + +S + ++A+KDG +   YG      P   G  
Sbjct: 56  KGHVFSCIGEFIWYISCSNRLEPVEYY-ISRYKKFAEKDGTVWGAYG------PRIFGGD 108

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             Q   + + L   P +R+ ++  ++   ++      PC C  QF V +G L+  ++ RS
Sbjct: 109 RSQYEVVKEMLSERPSTRKAVIQLFDREDVLQDYNDIPCTCTMQFLVRDGMLNLVVHMRS 168

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS---P 224
            DV++G+P +I +++++  +LA  +GF+ G + H +G  HLY++  E+ +  L       
Sbjct: 169 NDVYMGLPHDIFAFTMIQEILAHDLGFKLGTYKHMVGSFHLYDHDREKVEQYLKEGFQPT 228

Query: 225 RTLPQM 230
           R +P M
Sbjct: 229 REMPAM 234


>gi|307325213|ref|ZP_07604416.1| thymidylate synthase [Streptomyces violaceusniger Tu 4113]
 gi|306889017|gb|EFN20000.1| thymidylate synthase [Streptomyces violaceusniger Tu 4113]
          Length = 316

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 18/195 (9%)

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG 106
           T+ V+    V E +W L G S+ S++  +   +  ++AD DG L   YG + R+W     
Sbjct: 56  TRIVNPAFAVAETVWHLSG-SDASWIFDYNERL-RQYAD-DGVLLGAYGPRMRNW----A 108

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP--PCHCLFQFYVDNGKLSCQLY 164
             +DQ++ +V+ L+ DP SRR ++  ++ A  D       PC   F+F++   +L     
Sbjct: 109 GKVDQLARVVEILKEDPDSRRALIQLYDPAQ-DAAGHKDVPCTLGFRFHLRADRLHMATM 167

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
            R  DV++G+P+++  Y++L  ++A  +  + GEF   +G +H+Y+ H EQA+L      
Sbjct: 168 MRGQDVWIGMPYDVFFYTVLHELVAGWLDAELGEFHLHVGSLHIYDEHVEQAEL------ 221

Query: 225 RTLPQMIINPNIVDL 239
             L  +  +P++ DL
Sbjct: 222 --LTSLAASPHMPDL 234


>gi|311278400|ref|YP_003940631.1| thymidylate synthase [Enterobacter cloacae SCF1]
 gi|308747595|gb|ADO47347.1| thymidylate synthase [Enterobacter cloacae SCF1]
          Length = 593

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 9/164 (5%)

Query: 54  SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
           S + ELLW++ G  ++ ++ R+ +  ++ ++D +  +   YG      P   GN  +Q  
Sbjct: 61  SALGELLWYMSGLHDLEFI-RYYIPKYNCFSDDNKTIYGGYG------PRIFGND-NQFM 112

Query: 114 SIVQSLRADPYSRRHIVSAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
            ++Q LR    SR+ I+  ++   L +K    PC C  QF + N KLS  +  RS DVFL
Sbjct: 113 RVIQLLREKKDSRQAIIQIFHSDDLKEKHKDIPCTCTLQFILRNNKLSLIVNMRSNDVFL 172

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           G P ++ +++++    AS++G   G++ H +G +HLY+ H  +A
Sbjct: 173 GFPHDVFAFTMIQEYAASILGCDLGDYKHFVGSLHLYDEHRIKA 216


>gi|145244279|gb|ABP49090.1| putative thymidylate synthase [Streptomyces lividans]
          Length = 308

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 10/171 (5%)

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            V E +W L G S+  ++  +   +  ++AD DG L   YG + R+W    G  +DQ++ 
Sbjct: 56  AVAETVWHLSG-SDAPWIFDYNYRL-RQFAD-DGVLLGAYGPRMRNW----GGKVDQLAR 108

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALP--PCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
           +V+ L+AD  SRR ++  ++ A  D       PC   F+F++  G+L      R  DV++
Sbjct: 109 VVEILQADSDSRRALIQLYDPAQ-DAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWI 167

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           G+P+++  Y++L  ++A  +  + GEF   +G +H+Y+ H EQAD   S S
Sbjct: 168 GMPYDVFFYTVLHELVAGWLDAELGEFHLHIGSLHIYDEHIEQADALTSLS 218


>gi|256784563|ref|ZP_05522994.1| thymidylate synthase [Streptomyces lividans TK24]
 gi|289768447|ref|ZP_06527825.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289698646|gb|EFD66075.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 316

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 10/171 (5%)

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            V E +W L G S+  ++  +   +  ++AD DG L   YG + R+W    G  +DQ++ 
Sbjct: 64  AVAETVWHLSG-SDAPWIFDYNNRL-RQFAD-DGVLLGAYGPRMRNW----GGKVDQLAR 116

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALP--PCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
           +V+ L+AD  SRR ++  ++ A  D       PC   F+F++  G+L      R  DV++
Sbjct: 117 VVEILQADSDSRRALIQLYDPAQ-DAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWI 175

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           G+P+++  Y++L  ++A  +  + GEF   +G +H+Y+ H EQAD   S S
Sbjct: 176 GMPYDVFFYTVLHELVAGWLDAELGEFHLHIGSLHIYDEHIEQADALTSLS 226


>gi|170694064|ref|ZP_02885220.1| thymidylate synthase [Burkholderia graminis C4D1M]
 gi|170141136|gb|EDT09308.1| thymidylate synthase [Burkholderia graminis C4D1M]
          Length = 353

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 85/166 (51%), Gaps = 10/166 (6%)

Query: 54  SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
           S + E LW+L G + + ++  + +  + E++D +  +   YG +            +Q+ 
Sbjct: 63  SCLGEFLWYLSGSNKLDFIQYY-IKSYSEFSDDNETIFGAYGPRLFG----SDKAPNQVQ 117

Query: 114 SIVQSLRADPYSRRHIVSAWNVA-----LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +++++LRA   SRR  +  ++       L  +    PC C  QF V + +L   +  RS 
Sbjct: 118 NVIETLRASSTSRRAAIQLYHGEDLAQNLEKRRKDLPCTCTLQFTVRDHQLHAMVMMRSN 177

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
           D F+G+P +I ++++L  ++A  +G + G++ H +G +HLY    +
Sbjct: 178 DAFMGLPHDIFAFTMLQELIARSLGVEVGQYKHAVGSLHLYATDIQ 223


>gi|157368568|ref|YP_001476557.1| thymidylate synthase [Serratia proteamaculans 568]
 gi|157320332|gb|ABV39429.1| thymidylate synthase [Serratia proteamaculans 568]
          Length = 325

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 13/194 (6%)

Query: 54  SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
           S + ELLW+L   +++ ++ RH +  + ++A+ DG +   YG +  S       + +Q+ 
Sbjct: 63  SCLGELLWYLSAQNDLDFI-RHFIPRYVKYAESDGRIHGGYGPRLFSM----HGLYNQLE 117

Query: 114 SIVQSLRADPYSRRHIVSAWNVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           +++  L+    +RR ++  ++ + +        + A  PC    QF V    L   +  R
Sbjct: 118 NVISLLQEKRTTRRALIQLFDASDLVTDNPEQTEYADIPCTISLQFIVRQDALHLFVCMR 177

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225
           S D F+G+P ++ ++++L  ++A + G + G + H +  +H+Y  HFEQ   LQ      
Sbjct: 178 SNDAFMGLPHDVFAFTMLQELVARLTGCKLGHYHHFVSSLHIYEEHFEQVKALQQEGFMS 237

Query: 226 TLPQMIINPNIVDL 239
           TLP M   P I  L
Sbjct: 238 TLPVMGDMPEIQSL 251


>gi|291092708|gb|ADD74391.1| thymidylate synthase [uncultured virus]
          Length = 96

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%)

Query: 10 HVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN 68
           V+K G  R DRTG GTR+ FG  + FDL     PLL  +++ +KS++ ELLWFLRG+++
Sbjct: 1  KVLKRGEQRDDRTGTGTRALFGELLEFDLRGNRLPLLNCRRLSFKSILEELLWFLRGETD 60

Query: 69 VSYLHRHGVSIWDEWADKD 87
             L R GV IW E A +D
Sbjct: 61 SKILERRGVHIWTEHATRD 79


>gi|474095|emb|CAA83575.1| thymidylate synthase [Mycoplasma pneumoniae]
          Length = 50

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/41 (80%), Positives = 38/41 (92%)

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D+M LPPCH L+QFYV +G+LSCQLYQRSGD+FLGIPFNIA
Sbjct: 1   DQMLLPPCHSLYQFYVQDGQLSCQLYQRSGDIFLGIPFNIA 41


>gi|310722252|ref|YP_003969076.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4]
 gi|306021095|gb|ADM79630.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4]
          Length = 105

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 4/103 (3%)

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DV LG+PFNIASY+LL  ++A +   + GE + +  DVH+Y NH       LSR  
Sbjct: 4   QRSVDVGLGLPFNIASYALLVHIVARICNLEVGELVFSGADVHIYENHLSHLGGMLSREE 63

Query: 225 RTLPQMIINPNI---VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R LP +   P+I    DL      DF L  Y+PH  I   ++V
Sbjct: 64  RPLPTLSF-PDIDSLSDLRLLEAADFRLDGYDPHPTIKLPMAV 105


>gi|206973310|ref|ZP_03234232.1| thymidylate synthase [Bacillus cereus AH1134]
 gi|206732194|gb|EDZ49394.1| thymidylate synthase [Bacillus cereus AH1134]
          Length = 326

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 24/223 (10%)

Query: 43  PLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP 102
           P+L  + ++    + E  W + G + ++ L+   ++ +D ++D    L   YG + R   
Sbjct: 54  PILQERALNPFFALTEFSWIITGSNRLTPLNNF-INDFDRFSDDGFTLNGAYGHRLRELH 112

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP-PCHCLFQFYVDNGKLSC 161
                 +DQ+   ++ L+ +  +RR +++ W++  +   +   PC+      + N  L  
Sbjct: 113 G-----LDQLEKSIRILQEEKSTRRVVLTMWHIDDLGSNSRDIPCNISIMLKIRNNLLDM 167

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +  RS D+FLG+P+N+  + LL   +A  IG + G   H    +HLY+ HFE+      
Sbjct: 168 TVINRSNDLFLGVPYNVVVFYLLQCYIAKKIGCKVGVQRHFTDSLHLYSQHFEKV----- 222

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFT---LRSY--EPHAAIL 259
                  Q II  N ++ + + YE F    L +Y  E H  IL
Sbjct: 223 -------QSIIQNNNLERIKYMYEKFEKIDLSTYIDENHRYIL 258


>gi|331028071|ref|YP_004421785.1| thymidylate synthase [Roseobacter phage RDJL Phi 1]
 gi|301341534|gb|ADK73418.1| thymidylate synthase [Roseobacter phage RDJL Phi 1]
          Length = 295

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 17/227 (7%)

Query: 4   YLDLLRHVIKFG---SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           Y  LL  ++  G   ++ R RT +      G+  + DL+ G  P+   ++ +      E 
Sbjct: 10  YRCLLGELMNHGVTETNERTRTQIKMLQG-GHSFKLDLTSGRLPIAGNRRYYPHVAAAET 68

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
            W   G  + +++      +W ++ + DGEL   YG +WR     +    DQI   V+ L
Sbjct: 69  AWQFMGTKDPAFIVSKAPKLWSKFVE-DGELKTAYGHRWR-----EAFGRDQIKLAVKEL 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALP-----PCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
             +P +R+  +SAW+ +  D +  P     PC   F        L   ++ RS D F+G+
Sbjct: 123 MDNPTNRQLFISAWDPS-CDGLGGPQPKNIPCPVGFTVSRFRDDLHMSVFIRSSDAFVGL 181

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           P+++  Y+L    + +  G +      TL   HLY  H+   +  L+
Sbjct: 182 PYDVMCYALTADAIGAEAGLRPASLHVTLAHPHLYEPHWLATEACLT 228


>gi|238025095|ref|YP_002909327.1| Thymidylate synthase protein [Burkholderia glumae BGR1]
 gi|237879760|gb|ACR32092.1| Thymidylate synthase protein [Burkholderia glumae BGR1]
          Length = 329

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 8/237 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R +  +  F    ++K +      E LW+
Sbjct: 12  YLATLRDVCTAYEYRNAPRGQAEREIIGYSARIEDPRARFCRHASRKQNVVFNYAEALWY 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G ++++++  +  S+     D     G  YG +   + D DG  IDQI   +  L R 
Sbjct: 72  LSGRNDLAFIEYYAPSMARYSPDGKTLPGTGYGARLLHFGD-DG--IDQIERAIDILKRD 128

Query: 122 DPYSRRHIVSAWNVA--LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++    L  +     C    Q  + +G+L+   + R+ D ++G+  ++ 
Sbjct: 129 DAESKRVVLQIFDAREDLYKRNIDVSCTLGLQLLLRDGRLNMVAFMRANDAYVGLLNDVF 188

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           S++ L   LAS IG + G + H +G VH+Y+ +  QA+  L   P T    +  P +
Sbjct: 189 SFTFLQEYLASAIGCELGTYTHHVGSVHIYDQNLLQAEALLG-PPGTAVTAVAPPRM 244


>gi|115377305|ref|ZP_01464513.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|115365683|gb|EAU64710.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 333

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 10/212 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH---ELL 60
           YL  LR + +    R    G  +R   G+   F+L+     ++       +++    E L
Sbjct: 11  YLHGLRWIYESPQFRVAPRGFASRENLGFC--FELTDPLARVSCAPERKTNIIFNFAEAL 68

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W+L G +++  +  +  SI     D     G  YG +      + G  I+Q +  V  L+
Sbjct: 69  WYLSGQADLEQISYYAPSIRKYSMDGRTLTGTAYGAKLFR---FGGAAINQWNRAVDLLK 125

Query: 121 ADPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
            DP ++R ++  ++    LI       C    QF+V  G+L    Y R+ D F G+  +I
Sbjct: 126 EDPNTKRAVLQIFDAHELLIQDNIDVSCTLGLQFFVREGRLYAAAYMRANDAFRGVVSDI 185

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
            S++ L  M+A  +G + G + H +G  H+Y 
Sbjct: 186 FSFTFLQEMMARQLGLKVGSYFHYVGSFHIYE 217


>gi|310823030|ref|YP_003955388.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|309396102|gb|ADO73561.1| Thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 336

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 10/212 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH---ELL 60
           YL  LR + +    R    G  +R   G+   F+L+     ++       +++    E L
Sbjct: 14  YLHGLRWIYESPQFRVAPRGFASRENLGFC--FELTDPLARVSCAPERKTNIIFNFAEAL 71

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W+L G +++  +  +  SI     D     G  YG +      + G  I+Q +  V  L+
Sbjct: 72  WYLSGQADLEQISYYAPSIRKYSMDGRTLTGTAYGAKLFR---FGGAAINQWNRAVDLLK 128

Query: 121 ADPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
            DP ++R ++  ++    LI       C    QF+V  G+L    Y R+ D F G+  +I
Sbjct: 129 EDPNTKRAVLQIFDAHELLIQDNIDVSCTLGLQFFVREGRLYAAAYMRANDAFRGVVSDI 188

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
            S++ L  M+A  +G + G + H +G  H+Y 
Sbjct: 189 FSFTFLQEMMARQLGLKVGSYFHYVGSFHIYE 220


>gi|207742054|ref|YP_002258446.1| thymidylate synthase protein [Ralstonia solanacearum IPO1609]
 gi|206593440|emb|CAQ60367.1| putative thymidylate synthase protein [Ralstonia solanacearum
           IPO1609]
          Length = 283

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 88/161 (54%), Gaps = 15/161 (9%)

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           + G + +S++  + +S +DE++D    +   YG +      ++   ++Q+S++++ L  +
Sbjct: 1   MAGSNELSFIQYY-ISRYDEFSDDGNTVHGAYGPRL-----FNMRGVNQVSNVIEKLSGN 54

Query: 123 PYSRRHIVSAWN-------VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             +RR ++  +N       VA+  K    PC C  QF +   +L   +  RS D +LG+P
Sbjct: 55  NDTRRAVIQLFNAEDLGCDVAVGRKDI--PCTCTMQFSLRARQLHMFVTMRSNDAYLGLP 112

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
            +I ++++L  ++A  +G + G + H +G +HLY+ + +QA
Sbjct: 113 HDIFAFTMLQEIVARAVGAELGTYKHAVGSLHLYSKNTDQA 153


>gi|21700319|gb|AAM75819.1|AF485373_1 thymidylate synthase [Mastigamoeba balamuthi]
          Length = 65

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 8/65 (12%)

Query: 91  GPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
           GP+YG QWR +         DY G  IDQ+ ++++ +R DP SRR I+SAWN   ++KMA
Sbjct: 1   GPVYGFQWRHFGAEYTNMNADYAGKGIDQLKNVIEMIRHDPSSRRIIMSAWNPLDLEKMA 60

Query: 143 LPPCH 147
           LPPCH
Sbjct: 61  LPPCH 65


>gi|7670721|gb|AAF66223.1| thymidylate synthase [Felis catus]
          Length = 45

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/45 (73%), Positives = 39/45 (86%)

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           LSCQLYQRSGD+ LG+PFNIASYSLLT M+A + G + G+FIHTL
Sbjct: 1   LSCQLYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFIHTL 45


>gi|260575990|ref|ZP_05843984.1| thymidylate synthase [Rhodobacter sp. SW2]
 gi|259021689|gb|EEW24991.1| thymidylate synthase [Rhodobacter sp. SW2]
          Length = 358

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 16/183 (8%)

Query: 35  RFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS----YLHRHGVSIWDEWADKDGEL 90
           R  LS+ F      K    S + EL W+L G   V     Y+  +   I DE    +G  
Sbjct: 50  RARLSRSF-----SKAKAFSPLGELFWYLSGSDRVEFIKHYIPNYPKLIKDE-VTANGAY 103

Query: 91  GP-IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW-NVALIDKMALPPCHC 148
           GP I+G +  +    DG    +   ++++LR    SR  +V  + N     K    PC C
Sbjct: 104 GPRIFGKE--ALAKRDG--ASEWDRVIRTLREREGSRNALVQIYDNSDAKPKNGDKPCTC 159

Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
             QF + NG+L    + RS D F G+P ++ ++++L  + A  +G   G + H++  +HL
Sbjct: 160 TIQFAIRNGQLLMHTHMRSNDAFFGLPHDVFTFTMLQEIAARELGLGLGRYSHSVTSLHL 219

Query: 209 YNN 211
           Y++
Sbjct: 220 YHD 222


>gi|297729145|ref|NP_001176936.1| Os12g0446900 [Oryza sativa Japonica Group]
 gi|255670280|dbj|BAH95664.1| Os12g0446900 [Oryza sativa Japonica Group]
          Length = 89

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/43 (72%), Positives = 38/43 (88%)

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           +FYV+NG+LSCQ+YQRS D+ LG+PFNIASYSLLT M+A V G
Sbjct: 32  KFYVENGELSCQMYQRSADMGLGVPFNIASYSLLTCMIAQVCG 74


>gi|297611836|ref|NP_001067911.2| Os11g0484400 [Oryza sativa Japonica Group]
 gi|255680095|dbj|BAF28274.2| Os11g0484400 [Oryza sativa Japonica Group]
          Length = 77

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 39/44 (88%)

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           FQFYV++G+LSCQ+YQRS D+ LG+PFNIASYSLLT M+A V G
Sbjct: 19  FQFYVESGELSCQMYQRSADMGLGVPFNIASYSLLTYMIAHVCG 62


>gi|312965796|ref|ZP_07780022.1| thymidylate synthase family protein [Escherichia coli 2362-75]
 gi|331669729|ref|ZP_08370575.1| conserved hypothetical protein [Escherichia coli TA271]
 gi|312289039|gb|EFR16933.1| thymidylate synthase family protein [Escherichia coli 2362-75]
 gi|331063397|gb|EGI35310.1| conserved hypothetical protein [Escherichia coli TA271]
          Length = 326

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 13/191 (6%)

Query: 54  SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
           S + E LW+L   +++ ++ +H +  + E A+ DG++   YG +  +       + +Q+ 
Sbjct: 63  SCLGEFLWYLSAQNDLEFI-KHFIPRYAESAESDGKIHGGYGPRLFNM----RGLYNQLK 117

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALP-------PCHCLFQFYVDNGKLSCQLYQR 166
           +++  L+    +RR ++  ++ + +             PC    QF V   +L   +  R
Sbjct: 118 NVINLLQEKKPTRRAVIQLFDASDLVPSKTEQREYVDIPCTISMQFIVRCEELHLFVCMR 177

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225
           S D F+G+P ++ ++++L  ++A +IG + G + H +  +HLY N  E+   LQ      
Sbjct: 178 SNDAFMGLPHDVFAFTMLQELVARLIGCELGHYHHFVSSLHLYKNDLEKVKALQKEGFMS 237

Query: 226 TLPQMIINPNI 236
           TLP M   P +
Sbjct: 238 TLPVMGSMPEM 248


>gi|194450574|ref|YP_002048341.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|300925828|ref|ZP_07141676.1| thymidylate synthase [Escherichia coli MS 182-1]
 gi|194408878|gb|ACF69097.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|300418080|gb|EFK01391.1| thymidylate synthase [Escherichia coli MS 182-1]
          Length = 326

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 13/191 (6%)

Query: 54  SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
           S + E LW+L   +++ ++ +H +  + E A+ DG++   YG +  +       + +Q+ 
Sbjct: 63  SCLGEFLWYLSAQNDLEFI-KHFIPRYAESAESDGKIHGGYGPRLFNM----RGLYNQLK 117

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALP-------PCHCLFQFYVDNGKLSCQLYQR 166
           +++  L+    +RR ++  ++ + +             PC    QF V   +L   +  R
Sbjct: 118 NVINLLQEKKPTRRAVIQLFDASDLVPSKTEQREYVDIPCTISMQFIVRCEELHLFVCMR 177

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225
           S D F+G+P ++ ++++L  ++A +IG + G + H +  +HLY N  E+   LQ      
Sbjct: 178 SNDAFMGLPHDVFAFTMLQELVARLIGCELGHYHHFVSSLHLYKNDLEKVKALQKEGFMS 237

Query: 226 TLPQMIINPNI 236
           TLP M   P +
Sbjct: 238 TLPVMGSMPEM 248


>gi|169634660|ref|YP_001708396.1| putative thymidylate synthase [Acinetobacter baumannii SDF]
 gi|87299249|emb|CAJ77006.1| Thymidylate synthase [Acinetobacter baumannii]
 gi|169153452|emb|CAP02595.1| putative Thymidylate synthase [Acinetobacter baumannii]
          Length = 222

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 27/171 (15%)

Query: 54  SVVHELLWFLRGDSNVSYL------HRHGVSIW-DEWADKDGELGP-IYGVQWRSWPDYD 105
           S + E  W+L G  ++ ++      +R  +    DE     G  GP I+G Q        
Sbjct: 61  SCIGEFFWYLNGSDSLEFIEYYISDYRKYIEYQIDENKPALGAYGPRIFGAQ-------- 112

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQL 163
               +Q + I++ L+  P SRR ++S ++    L +     PC CL QF++ N +L    
Sbjct: 113 ----NQFNKIIEVLKDKPTSRRAVISIYSKDDLLREDSRDIPCTCLLQFFIRNERLHLTA 168

Query: 164 YQRSGDVFLGIPFNIASYSLL-TMMLASVI----GFQYGEFIHTLGDVHLY 209
             RS D  +G+  +I S++L+  ++LA +I      Q GE+ H +G +H+Y
Sbjct: 169 TMRSNDAAIGLVHDIFSFTLIQELLLAKLIRYIPNLQLGEYTHIVGSLHIY 219


>gi|305664003|ref|YP_003860291.1| thymidylate synthase [Ignisphaera aggregans DSM 17230]
 gi|304378572|gb|ADM28411.1| thymidylate synthase [Ignisphaera aggregans DSM 17230]
          Length = 241

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 53/107 (49%)

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           DG +++QI  IV+ LR  PY+RR     W      +   PPC     F V +GKL   ++
Sbjct: 102 DGRIVNQIEKIVEKLRKTPYTRRAQAITWQPWKDLETEHPPCLQRIWFRVIDGKLVMHIH 161

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
            RS D F     N+ +++ L   +A+ +G + G +IH     H+Y  
Sbjct: 162 MRSNDAFKAAFMNMYAFTELQRFVANELGVEPGRYIHIADSYHVYER 208


>gi|299142236|ref|ZP_07035369.1| thymidylate synthase [Prevotella oris C735]
 gi|298576325|gb|EFI48198.1| thymidylate synthase [Prevotella oris C735]
          Length = 212

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y ++L+ +I  G  + +R G   R     Q+         +  +  +  K + +EL 
Sbjct: 1   MNKYHEILKRIIVSGKTQHNRKGC-IRYLLNEQLSLSPVDLLDIFESHGIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              V   S+P Y   +   I+ I +  R
Sbjct: 60  LFMQGERQVQKYREVGINWWDYCG----------SVLVNSYPTYFEKLPPLIAKINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D+G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPADI-- 162

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           Y L  M  A  I          LG+VH+Y N+ E+  L L
Sbjct: 163 YHLYLM--AQQIDLPLKNITLNLGNVHIYENNLERTRLLL 200


>gi|170755095|ref|YP_001780402.1| thymidylate synthase [Clostridium botulinum B1 str. Okra]
 gi|169120307|gb|ACA44143.1| thymidylate synthase [Clostridium botulinum B1 str. Okra]
          Length = 324

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 10/189 (5%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G +++ Y+  +  ++     D     G  YG +  S   Y+ N I+Q + I++
Sbjct: 65  EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YEYNKINQWNRIIK 121

Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             + DP ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI 
Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIRERKLYMTTFMRANDAYRGII 181

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230
            ++ S++ +   LA+ +    G++ H +   H+Y   F+ A+  L  S       + P+M
Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241

Query: 231 IINPNIVDL 239
               N  DL
Sbjct: 242 PKKDNWEDL 250


>gi|152002543|dbj|BAF73567.1| thymidylate synthase [Onion yellows phytoplasma OY-W]
          Length = 58

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/43 (69%), Positives = 36/43 (83%)

Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           I+++WN  L+++MALPPCH L QFYV  GKLS QLYQRSGDVF
Sbjct: 2   ILNSWNPPLLNQMALPPCHVLIQFYVHQGKLSLQLYQRSGDVF 44


>gi|6644121|gb|AAF20914.1| thymidylate synthase [Equus caballus]
          Length = 44

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 38/44 (86%)

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HT
Sbjct: 1   LSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHT 44


>gi|148378764|ref|YP_001253305.1| thymidylate synthase [Clostridium botulinum A str. ATCC 3502]
 gi|153931597|ref|YP_001383152.1| thymidylate synthase [Clostridium botulinum A str. ATCC 19397]
 gi|153935631|ref|YP_001386700.1| thymidylate synthase [Clostridium botulinum A str. Hall]
 gi|148288248|emb|CAL82322.1| putative phage-related deoxyuridylate hydroxymethyltransferase
           [Clostridium botulinum A str. ATCC 3502]
 gi|152927641|gb|ABS33141.1| thymidylate synthase [Clostridium botulinum A str. ATCC 19397]
 gi|152931545|gb|ABS37044.1| thymidylate synthase [Clostridium botulinum A str. Hall]
          Length = 324

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G +++ Y+  +  ++     D     G  YG +  S   Y  N I+Q + I++
Sbjct: 65  EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGYNKINQWNRIIK 121

Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             + DP ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI 
Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230
            ++ S++ +   LA+ +    G++ H +   H+Y   F+ A+  L  S       + P+M
Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSAKKELSFPRM 241

Query: 231 IINPNIVDL 239
               N  DL
Sbjct: 242 PKKDNWEDL 250


>gi|226948057|ref|YP_002803148.1| thymidylate synthase [Clostridium botulinum A2 str. Kyoto]
 gi|226843129|gb|ACO85795.1| thymidylate synthase [Clostridium botulinum A2 str. Kyoto]
          Length = 324

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G +++ Y+  +  ++     D     G  YG +  S   Y  N I+Q + I++
Sbjct: 65  EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGYNKINQWNRIIK 121

Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             + DP ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI 
Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230
            ++ S++ +   LA+ +    G++ H +   H+Y   F+ A+  L  S       + P+M
Sbjct: 182 SDVFSFTFIQEFLAAELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241

Query: 231 IINPNIVDL 239
               N  DL
Sbjct: 242 PKKDNWEDL 250


>gi|209972965|ref|YP_002300412.1| gp29 [Bacillus phage SPO1]
 gi|209871285|gb|ACI91041.1| gp29 [Bacillus phage SPO1]
          Length = 383

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 14/217 (6%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           Y+D+L  VIK G     R G   +      + F +  +    L  + ++    V E LW 
Sbjct: 13  YMDILSTVIKEGDVLAPR-GKRIKEIRPVMIEFKNPIRRTTFLKGRNINPFFQVAESLWI 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGN-----VIDQISSIVQ 117
           L G S+V +L  +  ++  +++D        YG + R W   D N      +DQ+  + +
Sbjct: 72  LAGRSDVGFLLDYNKNMG-QFSDDGVFFNAPYGERLRFWNRSDANNFIYNPLDQLRDVYE 130

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALP----PCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++ADP +R+ +   +N  L D +       PC+ L  F + NGKL   +Y RS D+  G
Sbjct: 131 KIKADPDTRQAVAVIYN-PLFDNINNDTKDRPCNLLLSFKLRNGKLDLSVYNRSNDLHWG 189

Query: 174 -IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
               N+  +S +   +A+ +G + G +      +H+Y
Sbjct: 190 TFGANLCQFSTILEAMATWLGVEVGSYYQITDSLHVY 226


>gi|183980062|ref|YP_001848353.1| thymidylate synthase, ThyA_1 [Mycobacterium marinum M]
 gi|183173388|gb|ACC38498.1| thymidylate synthase, ThyA_1 [Mycobacterium marinum M]
          Length = 316

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 9/196 (4%)

Query: 22  TGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81
           T   TR   G  +     +     T  +   ++ + +L W+L G +N   +  H V    
Sbjct: 31  TRAPTRELIGVSLELTEPRCRLSRTEARRLSRTGIAQLAWYLSGTTNPEMIL-HWVPNHR 89

Query: 82  EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS---AWNVALI 138
              + DG +   YG +     D       Q  ++++ L+    SRR ++    A ++   
Sbjct: 90  NELEADGTIHGAYGPRMFGTGDNA-----QFCTVLELLKTSSSSRRAVIQLFDATDLTGP 144

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            +    PC    QF+V + +L   +  RS D ++G+P ++ ++++L  ++A  +G   G 
Sbjct: 145 GRYKDVPCTNTLQFFVRDSRLHLMVTMRSNDAYIGLPLDVFAFTMLQELMAGELGIGIGR 204

Query: 199 FIHTLGDVHLYNNHFE 214
           +IH++G +H+Y  + E
Sbjct: 205 YIHSVGSLHIYEYNKE 220


>gi|399407|sp|P31654|DUHM_BPSP1 RecName: Full=Deoxyuridylate hydroxymethyltransferase;
           Short=Deoxyuridylate hydroxymethylase; AltName:
           Full=dUMP hydroxymethylase; Short=dUMP-HMase
 gi|14871|emb|CAA43136.1| 29 [Bacillus phage SPO1]
          Length = 383

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 14/217 (6%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           Y+D+L  VIK G     R G   +      + F +  +    L  + ++    V E LW 
Sbjct: 13  YMDILSTVIKEGDVLAPR-GKRIKEIRPVMIEFKNPIRRTTFLKGRNINPFFQVAESLWI 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGN-----VIDQISSIVQ 117
           L G S+V +L  +  ++  +++D        YG + R W   D N      +DQ+  + +
Sbjct: 72  LAGRSDVGFLLDYNKNMG-QFSDDGVFFNAPYGERLRFWNRSDANNFIYNPLDQLRDVYE 130

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALP----PCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++ADP +R+ +   +N  L D +       PC+ L  F + NGKL   +Y RS D+  G
Sbjct: 131 KIKADPDTRQAVAVIYN-PLFDNINNDTKDRPCNLLLSFKLRNGKLDLSVYNRSNDLHWG 189

Query: 174 -IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
               N+  +S +   +A+ +G + G +      +H+Y
Sbjct: 190 TFGANLCQFSTILEAMATWLGVEVGSYYQITDSLHVY 226


>gi|7670725|gb|AAF66224.1| thymidylate synthase [Bos taurus]
          Length = 45

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 38/45 (84%)

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           LSCQLYQRSGD+ LG+PFNIASY+LLT M+A +   + G+F+HTL
Sbjct: 1   LSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTL 45


>gi|33304370|gb|AAQ02614.1| thymidylate synthase [Hartmannella cantabrigiensis]
          Length = 65

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 8/65 (12%)

Query: 91  GPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
           GP+YG QWR +         DY G  +DQ+  ++  L+ +P  RR ++SAWN A +D+MA
Sbjct: 1   GPVYGFQWRHFGAKYVDMHTDYTGQGVDQLKDVIHKLKTNPNDRRIVMSAWNPADLDQMA 60

Query: 143 LPPCH 147
           LPPCH
Sbjct: 61  LPPCH 65


>gi|170758959|ref|YP_001786125.1| thymidylate synthase [Clostridium botulinum A3 str. Loch Maree]
 gi|169405948|gb|ACA54359.1| thymidylate synthase [Clostridium botulinum A3 str. Loch Maree]
          Length = 324

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G +++ Y+  +  ++     D     G  YG +  S   Y  N ++Q   I++
Sbjct: 65  EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGHNNVNQWHRIIE 121

Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             + DP ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI 
Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230
            ++ S++ +   LA+ +    G++ H +   H+Y   F+ A+  L  S       + P+M
Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241

Query: 231 IINPNIVDL 239
               N  DL
Sbjct: 242 PKKDNWEDL 250


>gi|187777878|ref|ZP_02994351.1| hypothetical protein CLOSPO_01470 [Clostridium sporogenes ATCC
           15579]
 gi|187774806|gb|EDU38608.1| hypothetical protein CLOSPO_01470 [Clostridium sporogenes ATCC
           15579]
          Length = 328

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 5/175 (2%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G +++ Y+  +  ++     D     G  YG +  S   Y  N I+Q   I++
Sbjct: 69  EALWYLSGSNDLDYISYYASNMKKYSMDGKILTGTAYGPKIFS---YGHNNINQWHRIIE 125

Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             + DP ++R  +  +  N  L  K     C   FQF++   +L    + R+ D + GI 
Sbjct: 126 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHELYMTTFMRANDAYRGII 185

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            ++ S++ +   LA+ +    G++ H +   H+Y   F+ A+  LS S     ++
Sbjct: 186 SDVFSFTFIQEFLATELNLDVGQYSHNVATTHIYEPDFKLAEKVLSESKSAKKEL 240


>gi|153939390|ref|YP_001390126.1| thymidylate synthase [Clostridium botulinum F str. Langeland]
 gi|152935286|gb|ABS40784.1| thymidylate synthase [Clostridium botulinum F str. Langeland]
 gi|295318216|gb|ADF98593.1| thymidylate synthase [Clostridium botulinum F str. 230613]
          Length = 324

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G +++ Y+  +  ++     D     G  YG +  S   Y  N I+Q   I++
Sbjct: 65  EALWYLSGSNDLDYISYYASNMKKYSMDGKILTGTAYGPKIFS---YGHNNINQWHRIIE 121

Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             + DP ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI 
Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230
            ++ S++ +   LA+ +    G++ H +   H+Y   F+ A+  L  S       + P+M
Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSDKKELSFPRM 241

Query: 231 IINPNIVDL 239
               N  DL
Sbjct: 242 PKKDNWEDL 250


>gi|62327210|ref|YP_223948.1| thymidylate synthase [Phage phiJL001]
 gi|50059528|gb|AAT69500.1| thymidylate synthase [Phage phiJL001]
          Length = 350

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 13/165 (7%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW L G  +++++ +   ++   ++D    +   YG +WR++ D+     DQ+S  V 
Sbjct: 68  EALWMLAGRHDLAFVEKFAKNM-RSFSDDGETMWGAYGWRWRTFFDF-----DQLSWAVH 121

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALP-----PCHCLFQFYV-DNGKLSCQLYQRSGDVF 171
            LR  P  RR +V  W   L  + A       PC+    F + D G+L   ++ RS D+ 
Sbjct: 122 RLRRLPNDRRVVVQMWAAGLDQERADAGGKDVPCNIAIHFRINDRGQLDMTVWNRSNDII 181

Query: 172 LGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
            G    N+   S+L   +AS +G + G +     D H Y++ F +
Sbjct: 182 WGAYGANVVHMSILQEYVASAVGVEVGRYWQVSDDYHAYSDLFNK 226


>gi|296417111|ref|XP_002838207.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634124|emb|CAZ82398.1| unnamed protein product [Tuber melanosporum]
          Length = 237

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 40/137 (29%)

Query: 3   QYLDLLRHVIKFGSDRRD--------------------------RTGVGTRSTFG-YQMR 35
           QYLDL+ +++  G  RRD                          RT  GT S F   Q+R
Sbjct: 53  QYLDLVYNILTNGERRRDMCSTISYPFYTHPRRKHSLTNPHQLKRTRAGTISLFAPQQLR 112

Query: 36  FDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK-------- 86
           F+L    FPLLT K V  K+++HE LWF+ G ++ + L   GV IW+E   +        
Sbjct: 113 FNLKNNTFPLLTKKHVFHKAIIHEPLWFVSGSTSNAPLSAVGVKIWEENGSRAYLDSIGL 172

Query: 87  ----DGELGPIYGVQWR 99
               +G+LGP+Y  + R
Sbjct: 173 TERAEGDLGPVYRFRLR 189


>gi|168178163|ref|ZP_02612827.1| thymidylate synthase [Clostridium botulinum NCTC 2916]
 gi|182670584|gb|EDT82558.1| thymidylate synthase [Clostridium botulinum NCTC 2916]
          Length = 324

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 10/189 (5%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G +++ Y+  +  ++     D     G  YG +  S   Y  N  +Q   IV+
Sbjct: 65  EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGHNNANQWHRIVE 121

Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             + DP ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI 
Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230
            ++ S++ +   LA+ +    G++ H +   H+Y   F+ A+  L  S       + P+M
Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241

Query: 231 IINPNIVDL 239
               N  DL
Sbjct: 242 PKKDNWEDL 250


>gi|258539603|ref|YP_003174102.1| thymidylate synthase [Lactobacillus rhamnosus Lc 705]
 gi|257151279|emb|CAR90251.1| Thymidylate synthase [Lactobacillus rhamnosus Lc 705]
          Length = 57

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/47 (68%), Positives = 36/47 (76%)

Query: 4  YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV 50
          YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV
Sbjct: 6  YLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKV 52


>gi|207727475|ref|YP_002255869.1| putative thymidylate synthase protein [Ralstonia solanacearum
           MolK2]
 gi|206590712|emb|CAQ56324.1| putative thymidylate synthase protein [Ralstonia solanacearum
           MolK2]
          Length = 294

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 18/186 (9%)

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGEL-GPIYGVQW----RSWPDYDGNVI 109
            + EL W LRG S V  +  +  S W   A    E+ G  YG +     R  P       
Sbjct: 48  AIGELCWHLRGSSLVDEIAYYA-SRWRTIAGNATEVTGSNYGAKIFKGHRGAPS------ 100

Query: 110 DQISSIVQSLRADPYSRRHIV--SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            Q S ++  LR D  SRR ++  S              C    QF + +GKL      RS
Sbjct: 101 -QWSRVINQLRIDRDSRRAVLYFSGTGEDTSSDSKDIACAVSLQFLIRDGKLDAIANMRS 159

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSRSP-- 224
            D  LG+P+++  +S+L  M A+ +G   G++ H  G +HLY +    A D+  SR+   
Sbjct: 160 NDAMLGLPYDVFLFSMLQEMAANSLGVDVGKYNHVAGSLHLYESDLLLAKDIISSRASEI 219

Query: 225 RTLPQM 230
           R +P+M
Sbjct: 220 RPMPRM 225


>gi|167996982|gb|ACA14348.1| MilA [Streptomyces rimofaciens]
          Length = 334

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 8/212 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  LR +      R    G  +R   G   R  D  +    +  ++ +      E LW+
Sbjct: 13  YLSQLRDIYHSPEFRNAPRGQASRERIGAGFRLLDPVQRHISVPARRANVVFNFAEALWY 72

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G   + ++  +   I    AD     G  YG +    P      ++Q  ++V++L  D
Sbjct: 73  LSGSDRLDFIQYYAPGIAAYSADGRTLRGTAYGPRIFRHP---AGGVNQWENVVKTLTDD 129

Query: 123 PYSRRHIVSAWN---VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           P S+R ++  ++   +A+ D + +  C    QF + +G L    Y R+ D F G   ++ 
Sbjct: 130 PDSKRAVIQIFDPRELAVADNIDVA-CTLALQFLIRDGLLCGIGYMRANDAFRGAVSDVF 188

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           S++ L    A  +G   G + H +G VH+Y++
Sbjct: 189 SFTFLQEFTARYLGLGIGTYHHVVGSVHIYDS 220


>gi|153840538|ref|ZP_01993205.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810]
 gi|149745801|gb|EDM56931.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810]
          Length = 136

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 14/116 (12%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD----------KDGE--LGPIYGVQWRSWP 102
           LL ++RG  N     + G   WD  A+          + GE  +G +YGVQ R+W 
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWA 116


>gi|116618549|ref|YP_818920.1| thymidylate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097396|gb|ABJ62547.1| thymidylate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 335

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 5/154 (3%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G++++SY+  +   + D   D     G  YG +   + + +   ++Q  ++ Q
Sbjct: 66  EALWYLTGNNSLSYISYYNKRMPDYSMDGQTLTGTAYGKKLFHFGEQN---LNQWQNVKQ 122

Query: 118 SLRADPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
            L  D  S+R ++  ++     I++     C    QF + N +L+   Y R+ D F GI 
Sbjct: 123 ELLNDADSKRAVIQIFDAHELTINQNLDVSCTLGLQFLIRNNQLNMVAYMRANDAFRGIV 182

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
            +I S++ +   +A  +  + G++ H++G +H+Y
Sbjct: 183 SDIFSFTFIQEFMARELNLKVGKYYHSVGTMHIY 216


>gi|296531913|ref|ZP_06894716.1| thymidylate synthase [Roseomonas cervicalis ATCC 49957]
 gi|296267779|gb|EFH13601.1| thymidylate synthase [Roseomonas cervicalis ATCC 49957]
          Length = 351

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 97/220 (44%), Gaps = 10/220 (4%)

Query: 6   DLLRHVIK--FGSDRRDRTGVG-TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           D LR        S  R  +G G  R   G  ++    +     T  +    S + E LW+
Sbjct: 10  DALRQAFTRLLSSKTRTSSGKGPAREIIGAILKIRNPRARFSRTENRAVLFSCLGETLWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G ++++++  +          K G      G   R +   + + ++    +++   AD
Sbjct: 70  LSGSNSLAHITYYIKKYRKLSGAKKGARLASGGYGPRIFGSGNKSQMNAAIQLIRRKLAD 129

Query: 123 PYSRRHIVSAWNVALIDKMAL------PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           P  +     A  + + DK+ L       PC C  QF    G+L   ++ RS D ++G+P 
Sbjct: 130 PDGKTDTRQAV-IQIYDKLDLLRNSSDVPCTCTMQFLPRRGRLHMVVHMRSNDAYIGLPH 188

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           ++ +++ +  ++A  +G + G + H++G +HLY++   +A
Sbjct: 189 DVFAFTFMQEIVAREVGLELGTYTHSVGSLHLYDHDERRA 228


>gi|319643105|ref|ZP_07997736.1| hypothetical protein HMPREF9011_03337 [Bacteroides sp. 3_1_40A]
 gi|317385273|gb|EFV66221.1| hypothetical protein HMPREF9011_03337 [Bacteroides sp. 3_1_40A]
          Length = 212

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 22/222 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  V+  G  + ++ G   R     Q+    +    +     +  K + +EL 
Sbjct: 1   MNKYYQILGKVLSSGKMQSNKKG-NIRYLLNEQLTLLPADLLDIFEGHTIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL- 119
            F+RG+ NV      G++ WD              +   S+P Y     +++  +++ + 
Sbjct: 60  LFMRGERNVEKYREVGINWWDYCGS----------ILVNSYPTY----FEKLPPLIERIN 105

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R    S+ +I+   +       A  PC  L QF ++ G+L    YQRS D  LG+P +I 
Sbjct: 106 REKRNSKNYILFLGSTGTESNQA--PCLSLVQFQIEQGELVMTAYQRSSDANLGLPADI- 162

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            Y L   +++  I          LG+VH+Y N+ ++ +  LS
Sbjct: 163 -YHL--YLISRQIELPLKSITLNLGNVHIYENNIDKTEQLLS 201


>gi|317504674|ref|ZP_07962639.1| thymidylate synthase [Prevotella salivae DSM 15606]
 gi|315664201|gb|EFV03903.1| thymidylate synthase [Prevotella salivae DSM 15606]
          Length = 212

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 20/216 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  +++ G  + ++ G   R     Q+    +    +  +  +  K + +EL 
Sbjct: 1   MNKYYQMLDKILEQGKPQANKKG-NIRYLLNEQLSLSPADLLDIFESHGIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              V   S+P Y   +   I+ I +  R
Sbjct: 60  LFMQGERQVEKYREVGINWWDYCG----------SVLVNSYPTYFEKLPPLIAKINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D+G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPADI-- 162

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           Y L  M  A  I          LG+VH+Y N+  + 
Sbjct: 163 YHLYLM--ARQIDLPLKNITLNLGNVHIYENNINRT 196


>gi|168183433|ref|ZP_02618097.1| thymidylate synthase [Clostridium botulinum Bf]
 gi|182673502|gb|EDT85463.1| thymidylate synthase [Clostridium botulinum Bf]
          Length = 324

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 10/189 (5%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G +++ Y+  +  ++     D     G  YG +  S   Y  N I+Q   IV+
Sbjct: 65  EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGYNKINQWHRIVE 121

Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             + D  ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI 
Sbjct: 122 LFKEDQDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIRKHKLYMTTFMRANDAYRGII 181

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230
            ++ S++ +   LA+ +    G++ H +   H+Y   F+ A+  L  S       + P+M
Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241

Query: 231 IINPNIVDL 239
               N  DL
Sbjct: 242 PKKDNWEDL 250


>gi|255010683|ref|ZP_05282809.1| thymidylate synthase [Bacteroides fragilis 3_1_12]
          Length = 212

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 30/222 (13%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTG-----VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSV 55
           M++Y  +L  V+  G  + +R G     +  R T       D+ +G P      +  K +
Sbjct: 1   MNKYYQILGRVLASGKTQTNRKGNIRYLLNERLTLTPADLLDIFEGHP------IARKKL 54

Query: 56  VHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
             EL  F++G+ NV      G++ WD              +   S+P Y    ++++  +
Sbjct: 55  KDELQLFMQGERNVEKYREAGINWWDYCG----------SILVNSYPTY----LEKLPPL 100

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
           ++ +  +  S ++ V        +     PC  L QF ++ G+L    YQRS D  LG+P
Sbjct: 101 IERINREKRSSKNYVLFLGSTDAESNQ-APCLSLVQFQIEQGELVMTAYQRSSDANLGLP 159

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
            +I  Y L  M  +  I          LG+VH+Y N+  + +
Sbjct: 160 ADI--YHLYLM--SRQIDLPLKSITLNLGNVHIYENNISRTE 197


>gi|32396172|gb|AAP42245.1| thymidylate synthase [Baboon gamma-herpesvirus]
          Length = 63

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
           DY+G  +DQ+  +V  +   PY RR ++ AWN A + +MALPPCH L QFYV  G
Sbjct: 9   DYEGQGVDQLRYVVDLIARRPYDRRIVMCAWNPADLAQMALPPCHVLCQFYVARG 63


>gi|313148493|ref|ZP_07810686.1| predicted protein [Bacteroides fragilis 3_1_12]
 gi|313137260|gb|EFR54620.1| predicted protein [Bacteroides fragilis 3_1_12]
          Length = 240

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 30/226 (13%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTG-----VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSV 55
           M++Y  +L  V+  G  + +R G     +  R T       D+ +G P      +  K +
Sbjct: 29  MNKYYQILGRVLASGKTQTNRKGNIRYLLNERLTLTPADLLDIFEGHP------IARKKL 82

Query: 56  VHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
             EL  F++G+ NV      G++ WD              +   S+P Y    ++++  +
Sbjct: 83  KDELQLFMQGERNVEKYREAGINWWDYCGS----------ILVNSYPTY----LEKLPPL 128

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
           ++ +  +  S ++ V        +     PC  L QF ++ G+L    YQRS D  LG+P
Sbjct: 129 IERINREKRSSKNYVLFLGSTDAESNQ-APCLSLVQFQIEQGELVMTAYQRSSDANLGLP 187

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +I  Y L  M  +  I          LG+VH+Y N+  + +  L+
Sbjct: 188 ADI--YHLYLM--SRQIDLPLKSITLNLGNVHIYENNISRTEQLLA 229


>gi|254882962|ref|ZP_05255672.1| predicted protein [Bacteroides sp. 4_3_47FAA]
 gi|298383655|ref|ZP_06993216.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|332878991|ref|ZP_08446704.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|254835755|gb|EET16064.1| predicted protein [Bacteroides sp. 4_3_47FAA]
 gi|298263259|gb|EFI06122.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|332683098|gb|EGJ55982.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 212

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 22/218 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +Y  +L  V+  G  + ++ G   R     Q+    +    +     +  K + +EL 
Sbjct: 1   MDKYYQILGKVLSSGKMQSNKKG-NIRYLLNEQLTLLPADLLDIFEGHTIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL- 119
            F+RG+ NV      G++ WD              +   S+P Y     +++  +++ + 
Sbjct: 60  LFMRGERNVEKYREAGINWWDYCGS----------ILVNSYPTY----FEKLPPLIERIN 105

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R    S+ +I+   +       A  PC  L QF ++ G+L    YQRS D  LG+P +I 
Sbjct: 106 REKRNSKNYILFLGSTGTESNQA--PCLSLVQFQIEQGELVMTAYQRSSDANLGLPADI- 162

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
            Y L   +++  I          LG+VH+Y N+ ++ +
Sbjct: 163 -YHL--YLISRQIELPLKSITLNLGNVHIYENNIDKTE 197


>gi|317505072|ref|ZP_07963018.1| thymidylate synthase [Prevotella salivae DSM 15606]
 gi|315663783|gb|EFV03504.1| thymidylate synthase [Prevotella salivae DSM 15606]
          Length = 212

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y   L  +++ G  + ++ G   R     Q+    +    +  +  +  K + +EL 
Sbjct: 1   MNKYYQTLGKILERGKIQTNKKG-NIRYLLNEQLSLSPADLLDIFESHGIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              V   S+P Y   +   I  I +  R
Sbjct: 60  LFMQGERLVEKYREAGINWWDYCG----------SVLVNSYPTYFEKLPPLIVRINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADI-- 162

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           Y L  M  A  I          LG+VH+Y N+ E+  L L
Sbjct: 163 YHLYLM--ARQIDLPLKNITLNLGNVHIYENNLERTRLLL 200


>gi|167906492|ref|ZP_02493697.1| putative thymidylate synthase [Burkholderia pseudomallei NCTC
           13177]
          Length = 329

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +      Y    +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLH---YGERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++    L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           S++ L   LAS +G + G + H +G +H+Y+++  +    L  S   +      P +
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDSDEAIVTAAAPPRM 244


>gi|242311181|ref|ZP_04810198.1| putative thymidylate synthase [Burkholderia pseudomallei 1106b]
 gi|242134420|gb|EES20823.1| putative thymidylate synthase [Burkholderia pseudomallei 1106b]
          Length = 329

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGYAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +      Y    +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLH---YGERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++    L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           S++ L   LAS +G + G + H +G +H+Y+++  +    L  S   +      P +
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDSDAAIVTAAAPPRM 244


>gi|126456897|ref|YP_001075509.1| putative thymidylate synthase [Burkholderia pseudomallei 1106a]
 gi|167849524|ref|ZP_02475032.1| putative thymidylate synthase [Burkholderia pseudomallei B7210]
 gi|254193553|ref|ZP_04899987.1| putative thymidylate synthase [Burkholderia pseudomallei S13]
 gi|126230665|gb|ABN94078.1| putative thymidylate synthase [Burkholderia pseudomallei 1106a]
 gi|169650306|gb|EDS82999.1| putative thymidylate synthase [Burkholderia pseudomallei S13]
          Length = 329

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGYAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +      Y    +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLH---YGERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++    L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           S++ L   LAS +G + G + H +G +H+Y+++  +    L  S   +      P +
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDSDAAIVTAAAPPRM 244


>gi|325271010|ref|ZP_08137596.1| thymidylate synthase [Prevotella multiformis DSM 16608]
 gi|324986656|gb|EGC18653.1| thymidylate synthase [Prevotella multiformis DSM 16608]
          Length = 212

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 22/217 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y D+L  +++ G  + ++ G   +     Q+    +    +  +  +  K + +EL 
Sbjct: 1   MNKYHDILEKIMRTGKMQHNKKG-NIKCLLNEQLSLSPADLLDIFESHDIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL- 119
            F++G+  V      G++ WD              V   S+P Y     +Q+  ++  + 
Sbjct: 60  LFMQGERQVEKYREAGINWWDYCG----------SVLVNSYPTY----FEQLPPLIAKIN 105

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R    S+ +I+           A  PC  L QF +D G L    YQRS D  LG+P +I 
Sbjct: 106 REKRNSKNYILFLGETNAESNQA--PCLSLVQFQIDEGVLVLSAYQRSSDANLGLPADI- 162

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
            Y L  M  +  I          L +VH+Y ++ E+ 
Sbjct: 163 -YHLYLM--SRQIDLPLKSITLNLANVHIYESNLERT 196


>gi|238798208|ref|ZP_04641694.1| Deoxyuridylate hydroxymethyltransferase [Yersinia mollaretii ATCC
           43969]
 gi|238717945|gb|EEQ09775.1| Deoxyuridylate hydroxymethyltransferase [Yersinia mollaretii ATCC
           43969]
          Length = 335

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 97/199 (48%), Gaps = 8/199 (4%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW 101
           F ++  +K +  + + E +W L G  ++ +L +H +    E++D +      YG + R+W
Sbjct: 25  FLVIPERKNNVFAQLAETIWVLAGRGDLEFL-QHYLPRSIEFSDDNKTWRAAYGPRLRNW 83

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN-VALIDKMALPPCHCLFQFYVDNGKLS 160
                   DQ+S ++  L+ DP ++R ++S ++ ++        PC+   QF   +  L 
Sbjct: 84  ----MGKTDQVSCVISRLQEDPNTKRAVMSLFDPMSDYSDTKDVPCNNWLQFIQRDNILY 139

Query: 161 CQLYQRSGDVFLGIP-FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DL 218
             +  R+ D   G    N   +S+L  ++A+ +G+Q G     +G  H+Y+ H+  + DL
Sbjct: 140 LHVTVRANDAIWGFSGINFFEWSVLHEIVATTLGYQVGTLSWYVGTFHIYSRHYNTSRDL 199

Query: 219 QLSRSPRTLPQMIINPNIV 237
              ++P++  +  I P  +
Sbjct: 200 LRIKNPKSPYECGIEPTSI 218


>gi|237794066|ref|YP_002861618.1| thymidylate synthase [Clostridium botulinum Ba4 str. 657]
 gi|229262626|gb|ACQ53659.1| thymidylate synthase [Clostridium botulinum Ba4 str. 657]
          Length = 324

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 10/189 (5%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G +++ Y+  +  ++     D     G  YG +  S   Y  N  +Q   IV+
Sbjct: 65  EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGHNNTNQWHRIVE 121

Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             + D  ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI 
Sbjct: 122 LFKEDQDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-----TLPQM 230
            ++ S++ +   LA+ +    G++ H +   H+Y   F+ A+  L  S       + P+M
Sbjct: 182 SDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRM 241

Query: 231 IINPNIVDL 239
               N  DL
Sbjct: 242 PKKDNWEDL 250


>gi|237509869|ref|ZP_04522584.1| thymidylate synthase [Burkholderia pseudomallei MSHR346]
 gi|235002074|gb|EEP51498.1| thymidylate synthase [Burkholderia pseudomallei MSHR346]
          Length = 329

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +      Y    +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLH---YGERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++    L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           S++ L   LAS +G + G + H +G +H+Y+++  +    L  S   +      P +
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDSDAAIVTAAAPPRM 244


>gi|311896637|dbj|BAJ29045.1| putative methyltransferase [Kitasatospora setae KM-6054]
          Length = 322

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 8/160 (5%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E +W L G S+  ++H     +        G L   YG + R W       +DQ+  + +
Sbjct: 68  ETVWILSG-SSADWIHDFNSRL--AGLTDHGALQGAYGPRLRRW----HGQLDQLDYVRR 120

Query: 118 SLRADPYSRRHIVSAWNVAL-IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
            L  D  SRR +V  ++           PC   ++FY+  G+L      RS DV+LG+P+
Sbjct: 121 QLTRDNESRRAVVQIFDPGRDTAGHKDVPCTLGYRFYLREGRLEMHTSMRSQDVWLGLPY 180

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           ++ + ++L  ++A  +G + G++ H +  +HLY  H + A
Sbjct: 181 DLITTTVLHELMAGWLGAEVGDYHHHVDSLHLYAQHQDTA 220


>gi|53722134|ref|YP_111119.1| thymidylate synthase protein [Burkholderia pseudomallei K96243]
 gi|76819171|ref|YP_335223.1| putative thymidylate synthase protein [Burkholderia pseudomallei
           1710b]
 gi|126444953|ref|YP_001062559.1| putative thymidylate synthase [Burkholderia pseudomallei 668]
 gi|134283524|ref|ZP_01770224.1| putative thymidylate synthase [Burkholderia pseudomallei 305]
 gi|167723549|ref|ZP_02406785.1| putative thymidylate synthase [Burkholderia pseudomallei DM98]
 gi|167819685|ref|ZP_02451365.1| putative thymidylate synthase [Burkholderia pseudomallei 91]
 gi|167828063|ref|ZP_02459534.1| putative thymidylate synthase [Burkholderia pseudomallei 9]
 gi|167898126|ref|ZP_02485528.1| putative thymidylate synthase [Burkholderia pseudomallei 7894]
 gi|167914845|ref|ZP_02501936.1| putative thymidylate synthase [Burkholderia pseudomallei 112]
 gi|167922687|ref|ZP_02509778.1| putative thymidylate synthase [Burkholderia pseudomallei BCC215]
 gi|217418809|ref|ZP_03450316.1| putative thymidylate synthase [Burkholderia pseudomallei 576]
 gi|226198340|ref|ZP_03793910.1| putative thymidylate synthase [Burkholderia pseudomallei Pakistan
           9]
 gi|254263271|ref|ZP_04954136.1| putative thymidylate synthase [Burkholderia pseudomallei 1710a]
 gi|254300441|ref|ZP_04967887.1| putative thymidylate synthase [Burkholderia pseudomallei 406e]
 gi|52212548|emb|CAH38574.1| putative thymidylate synthase protein [Burkholderia pseudomallei
           K96243]
 gi|76583644|gb|ABA53118.1| putative thymidylate synthase protein [Burkholderia pseudomallei
           1710b]
 gi|126224444|gb|ABN87949.1| putative thymidylate synthase [Burkholderia pseudomallei 668]
 gi|134245273|gb|EBA45367.1| putative thymidylate synthase [Burkholderia pseudomallei 305]
 gi|157810077|gb|EDO87247.1| putative thymidylate synthase [Burkholderia pseudomallei 406e]
 gi|217398113|gb|EEC38128.1| putative thymidylate synthase [Burkholderia pseudomallei 576]
 gi|225929624|gb|EEH25641.1| putative thymidylate synthase [Burkholderia pseudomallei Pakistan
           9]
 gi|254214273|gb|EET03658.1| putative thymidylate synthase [Burkholderia pseudomallei 1710a]
          Length = 329

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 7/237 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +      Y    +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLH---YGERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++    L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           S++ L   LAS +G + G + H +G +H+Y+++  +    L  S   +      P +
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDSDAAIVTAAAPPRM 244


>gi|167565755|ref|ZP_02358671.1| putative thymidylate synthase [Burkholderia oklahomensis EO147]
 gi|167572854|ref|ZP_02365728.1| putative thymidylate synthase [Burkholderia oklahomensis C6786]
          Length = 329

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 7/216 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +      Y    +DQI   V  L R 
Sbjct: 71  LSGRNDLEFIEHYAPSMARYSPDGKHLPGTGYGARLLH---YGERSLDQIERAVDILSRD 127

Query: 122 DPYSRRHIVSAWNVA--LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++    L  +     C    Q  + +G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEDLYRRNIDVSCTLGLQLLLRDGRLHTVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
           S++ L   +AS +G + G + H +G +H+Y+++  +
Sbjct: 188 SFTFLQEYVASRLGCEVGTYSHHVGSIHVYDDNLPR 223


>gi|224165617|ref|XP_002338837.1| predicted protein [Populus trichocarpa]
 gi|222873586|gb|EEF10717.1| predicted protein [Populus trichocarpa]
          Length = 82

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/82 (36%), Positives = 45/82 (54%)

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT ++A V     G+F+H +GD H+Y+ H      QL + P+  P + IN    D+ +F
Sbjct: 1   LLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQEQLRKLPKPFPILKINSEKKDIDTF 60

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
              DF L  Y+PH  I  K++V
Sbjct: 61  VAADFKLIGYDPHQKIEMKMAV 82


>gi|6573117|gb|AAF17556.1|AF201743_1 thymidylate synthase [Canis lupus familiaris]
          Length = 38

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/38 (68%), Positives = 33/38 (86%)

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
           +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G +
Sbjct: 1   ELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 38


>gi|237708114|ref|ZP_04538595.1| predicted protein [Bacteroides sp. 9_1_42FAA]
 gi|301309963|ref|ZP_07215902.1| thymidylate synthase [Bacteroides sp. 20_3]
 gi|229457942|gb|EEO63663.1| predicted protein [Bacteroides sp. 9_1_42FAA]
 gi|300831537|gb|EFK62168.1| thymidylate synthase [Bacteroides sp. 20_3]
          Length = 212

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 20/224 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L+ V+  G  ++ R G  +R      +    ++   +     +  K +  EL 
Sbjct: 1   MNKYYQILKKVLADGKTQKGRKG-ESRYLLNETVTLSPAELLDIFEGHNIARKKLRSELS 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F+ G+  V      G++ WD              +   S+P Y   +   I  I +  R
Sbjct: 60  LFMSGERQVEKYREAGINWWDYCGS----------ILVNSYPTYFEKLPPLIGKINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +   S+ +++   +       A  PC  L QF ++ G+L    YQRS D  LG+P +I  
Sbjct: 110 S---SKNYVLFLGSTGTESNQA--PCLSLVQFQIEQGELVLTAYQRSSDANLGLPADI-- 162

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           Y L   +++  I          LG+VH+Y N+  +    L+ +P
Sbjct: 163 YHL--YLISRQIELPLKSITINLGNVHIYENNVTRTQELLAGNP 204


>gi|169841694|ref|ZP_02874803.1| thymidylate synthase [candidate division TM7 single-cell isolate
          TM7a]
          Length = 60

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 6/60 (10%)

Query: 45 LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWA-----DKDGELGP-IYGVQW 98
          +TTKK+++ SV HELLWFL+G  N+ YL ++GV IWDEW      +K G+  P I G +W
Sbjct: 1  MTTKKLYFNSVAHELLWFLKGTGNIEYLAQNGVHIWDEWPYKNYLEKTGQRIPEINGDEW 60


>gi|167742513|ref|ZP_02415287.1| putative thymidylate synthase [Burkholderia pseudomallei 14]
          Length = 236

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 7/224 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   + +     +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYGE---RGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAWNV--ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++    L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           S++ L   LAS +G + G + H +G +H+Y+++  +    L  S
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALLDDS 231


>gi|261880956|ref|ZP_06007383.1| thymidylate synthase [Prevotella bergensis DSM 17361]
 gi|270332260|gb|EFA43046.1| thymidylate synthase [Prevotella bergensis DSM 17361]
          Length = 212

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 20/216 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y D+L  +++ G  + ++ G   +     Q+    +    +  +  +  K + +EL 
Sbjct: 1   MNKYHDILEKIMRTGKMQHNKKG-NIKYCLNEQLTLTPADLLDIFESHGIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              V   S+P Y   +   I+ I    R
Sbjct: 60  LFMQGERQVEKYREAGINWWDYCG----------SVLVNSYPTYFEKLPPLIAKINNEKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLFLGETNAESNQA--PCLSLVQFQIDEGELVISAYQRSSDANLGLPADI-- 162

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           Y L  M  +  I          L +VH+Y ++ E+ 
Sbjct: 163 YHLYLM--SRQIELPLKSITLNLANVHIYESNLERT 196


>gi|224535318|ref|ZP_03675857.1| hypothetical protein BACCELL_00179 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224523044|gb|EEF92149.1| hypothetical protein BACCELL_00179 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 212

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 20/216 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + ++ G   R     Q+    +    +     +  K + +EL 
Sbjct: 1   MNKYYMILEKILVLGKMQDNKKG-NIRCLLNEQLVLTPADLLDIFEGHSIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 60  LFMQGERCVEKYREAGINWWDYCG----------AILVNSYPSYFEKLPPLIAKINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++      +    A  PC  L QF +D  +L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLHLGATGVESNQA--PCLSLVQFQIDESELVISAYQRSSDANLGLPADI-- 162

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           Y L  M  +  I          LG+VH+Y N+ E+ 
Sbjct: 163 YHLYLM--SRQIELPLKSITLNLGNVHIYENNIEKT 196


>gi|288927902|ref|ZP_06421749.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330736|gb|EFC69320.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 215

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 28/217 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  LL +++  G ++ ++ G  T      Q+    +    +  ++ +  + + +EL 
Sbjct: 4   MNKYYSLLDNILSDGHNQTNKKGNIT-YLLNQQLTLTPADLLDIFESRSIARRKLRNELD 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ +V+   + G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 63  LFMQGERDVAKYRKAGITWWDYCG----------SILVNSYPTYFEKLPALIARINREKR 112

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++   +       A  PC  L QF +D+G+L    YQRS D  LG+P +I  
Sbjct: 113 T---SKNYVLFLGSTDAESNQA--PCLSLVQFQIDDGQLVISAYQRSSDANLGLPSDIYH 167

Query: 181 YSLLT----MMLASVIGFQYGEFIHTLGDVHLYNNHF 213
             L++    + L S+  F        LG+VH+Y N+ 
Sbjct: 168 LYLMSRQIELPLKSITLF--------LGNVHVYENNI 196


>gi|329957058|ref|ZP_08297625.1| thymidylate synthase [Bacteroides clarus YIT 12056]
 gi|328523326|gb|EGF50425.1| thymidylate synthase [Bacteroides clarus YIT 12056]
          Length = 239

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 20/213 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + ++ G   +     Q+    +    +     +  K + +EL 
Sbjct: 28  MNKYYCILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRNELQ 86

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ NV      G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 87  LFMQGERNVEKYREVGINWWDYCG----------SILVNSYPTYFEKLPPLIAKINREKR 136

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D+G+L    YQRS D  LG+P +I  
Sbjct: 137 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPSDI-- 189

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           Y L  M  A  I          LG+VH+Y N+ 
Sbjct: 190 YHLYLM--ARQIELPLKSITLYLGNVHIYENNI 220


>gi|296417085|ref|XP_002838194.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634111|emb|CAZ82385.1| unnamed protein product [Tuber melanosporum]
          Length = 95

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 51/89 (57%)

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           F++ S +LLT+M+A + G + GE I  +GD H+Y++H +    Q  R P+    ++IN  
Sbjct: 7   FSMGSLALLTIMIAHMYGQEAGELIPIMGDAHVYSDHADTLKGQFERDPKEFHTLMINRQ 66

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + D+   ++E F L  Y+P  +    +SV
Sbjct: 67  VDDIDDSKFECFELLGYDPRPSNQMNMSV 95


>gi|225730207|gb|ACO24919.1| thymidylate synthase-like protein [Enterobacter aerogenes]
          Length = 105

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 36/54 (66%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
          M  Y DLLR VI  G+D  DRTGVGT S +G  ++F+L +GFP  T K + WK+
Sbjct: 1  MDNYKDLLREVIITGADSVDRTGVGTVSIWGAMLKFNLQEGFPATTCKGLAWKA 54


>gi|26984051|gb|AAN85116.1| Orf105 [Citrobacter freundii]
 gi|60280767|gb|AAX18271.1| thymidylate synthase-like protein [Escherichia coli]
 gi|60280779|gb|AAX18282.1| thymidylate synthase-like protein [Escherichia coli]
 gi|225730221|gb|ACO24932.1| thymidylate synthase-like protein [Escherichia coli]
          Length = 105

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 36/54 (66%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
          M  Y DLLR VI  G+D  DRTGVGT S +G  ++F+L +GFP  T K + WK+
Sbjct: 1  MDNYKDLLREVIITGTDSVDRTGVGTVSIWGAMLKFNLQEGFPATTCKGLAWKA 54


>gi|307352585|ref|YP_003893636.1| thymidylate synthase, methanogen type [Methanoplanus petrolearius
           DSM 11571]
 gi|307155818|gb|ADN35198.1| thymidylate synthase, methanogen type [Methanoplanus petrolearius
           DSM 11571]
          Length = 240

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 2/118 (1%)

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+   ++R   D DG  IDQ+  +++ L+A+P SRR     W     D+   PPC    Q
Sbjct: 93  PVGDSEFRG--DGDGKGIDQVEYLIEKLKAEPNSRRAEAITWFPPKDDQSDNPPCLQRIQ 150

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
            +V +G+L+  +  RS D+   +  N+ +   L  M+A  +    G + HT    H+Y
Sbjct: 151 CFVRDGRLNMHVDFRSNDMLSALGANMYALVHLQKMIADRLKADVGWYSHTSVSAHMY 208


>gi|89899864|ref|YP_522335.1| thymidylate synthase [Rhodoferax ferrireducens T118]
 gi|89344601|gb|ABD68804.1| thymidylate synthase [Rhodoferax ferrireducens T118]
          Length = 347

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 23/183 (12%)

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWD----EWADKDGELGPIYGVQWRSWPDYDGNVID 110
            + E++W L G    ++L+      W+    ++A   G     YG + R+   + G  +D
Sbjct: 66  AIAEVIWILLGSDASNFLN-----FWNPVLPKYAGSGGTYHGAYGARLRT---HFG--LD 115

Query: 111 QISSIVQSLRADPYSRRHIVSAWN----VALIDKMALP---PCHCLFQFYVDNGKLSCQL 163
           QI  + Q L A+P SR+ ++  W+    + L D  +     PC+ +    V   KL    
Sbjct: 116 QIERVYQILSANPESRQAVLQIWDSREDLPLSDGASRDLDIPCNLVGMLKVRAQKLEWLQ 175

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
             RS DVFLG P N+  ++ L  ++A  +G   G F      +HLY + +++    +++ 
Sbjct: 176 IMRSNDVFLGTPHNLVQFTSLQEIIAGWLGIGIGSFSLVTDSLHLYEHDYDRC--SMTKV 233

Query: 224 PRT 226
           P T
Sbjct: 234 PST 236


>gi|53728853|ref|ZP_00134736.2| COG0207: Thymidylate synthase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 146

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 7/119 (5%)

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFN-IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           F   +G L     QRS +V LG+ +N I  Y+ L +M A + G + G+  H + + H+Y 
Sbjct: 29  FLALDGTLYLNSTQRSANVPLGLNWNMIQCYTFLALM-AQITGHKAGQAFHKIVNAHIYE 87

Query: 211 NHFE-QADLQLSRSPRTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
           +  E   D+QL R P   P++ INP I  L         +DF +  YE H AI    SV
Sbjct: 88  DQLELMRDVQLKRKPLASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 146


>gi|269968966|ref|ZP_06182902.1| Thymidylate synthase [Vibrio alginolyticus 40B]
 gi|269826423|gb|EEZ80821.1| Thymidylate synthase [Vibrio alginolyticus 40B]
          Length = 130

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 5/128 (3%)

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
            L PC     F + +  L     QRS DV LG+ FN+    +   ++A + G + G+  H
Sbjct: 3   CLRPCMYSHHFSLLDDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFH 62

Query: 202 TLGDVHLYNNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSFR----YEDFTLRSYEPHA 256
            + + H+Y +  E   D+QL R P   P   INP I  L         +DF +  YE H 
Sbjct: 63  KIVNAHIYEDQLELMRDVQLKREPLKAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHD 122

Query: 257 AILAKVSV 264
            I    SV
Sbjct: 123 PIRYPFSV 130


>gi|255690930|ref|ZP_05414605.1| thymidylate synthase [Bacteroides finegoldii DSM 17565]
 gi|260173138|ref|ZP_05759550.1| thymidylate synthase [Bacteroides sp. D2]
 gi|265750833|ref|ZP_06086896.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|298385881|ref|ZP_06995438.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|315921413|ref|ZP_07917653.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|319640489|ref|ZP_07995210.1| hypothetical protein HMPREF9011_00807 [Bacteroides sp. 3_1_40A]
 gi|260623265|gb|EEX46136.1| thymidylate synthase [Bacteroides finegoldii DSM 17565]
 gi|263237729|gb|EEZ23179.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|298261109|gb|EFI03976.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|313695288|gb|EFS32123.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|317387867|gb|EFV68725.1| hypothetical protein HMPREF9011_00807 [Bacteroides sp. 3_1_40A]
          Length = 214

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 20/213 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + ++ G   +     Q+    +    +     +  K +  EL 
Sbjct: 3   MNKYYRILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRSELQ 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ NV      G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 62  LFMQGERNVEKYREAGINWWDYCGS----------ILVNSYPTYFEKLPPLIAKINRERR 111

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDI-- 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           Y L  M  A  I          LG+VH+Y N+ 
Sbjct: 165 YHLYLM--ARQIELPLKSITLYLGNVHIYENNI 195


>gi|46552|emb|CAA68823.1| thymidylate synthase [Staphylococcus aureus]
          Length = 66

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           EFIHT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE H A
Sbjct: 1   EFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYESHPA 59

Query: 258 ILAKVSV 264
           I A ++V
Sbjct: 60  IKAPIAV 66


>gi|152002541|dbj|BAF73565.1| thymidylate synthase [Onion yellows phytoplasma OY-W]
          Length = 55

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/40 (55%), Positives = 36/40 (90%)

Query: 44 LLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83
          +LTTKK++ +S++HELLWFL+GD+N+ Y+ ++ V+IW+EW
Sbjct: 1  MLTTKKMNLRSIIHELLWFLKGDTNICYVVQNNVNIWNEW 40


>gi|254884020|ref|ZP_05256730.1| predicted protein [Bacteroides sp. 4_3_47FAA]
 gi|294778521|ref|ZP_06743944.1| thymidylate synthase [Bacteroides vulgatus PC510]
 gi|254836813|gb|EET17122.1| predicted protein [Bacteroides sp. 4_3_47FAA]
 gi|294447783|gb|EFG16360.1| thymidylate synthase [Bacteroides vulgatus PC510]
          Length = 214

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 20/214 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + ++ G   +     Q+    +    +     +  K +  EL 
Sbjct: 3   MNKYYRILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHHIARKKLRSELQ 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ NV      G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 62  LFMQGERNVEKYREAGINWWDYCGS----------ILVNSYPTYFEKLPPLIAKINRERR 111

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDI-- 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
           Y L  M  A  I          LG+VH+Y N+ +
Sbjct: 165 YHLYLM--ARQIELPLKSITLYLGNVHIYENNIQ 196


>gi|325298325|ref|YP_004258242.1| thymidylate synthase [Bacteroides salanitronis DSM 18170]
 gi|324317878|gb|ADY35769.1| thymidylate synthase [Bacteroides salanitronis DSM 18170]
          Length = 215

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 26/218 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG--FPLLTTKKVHWKSVVHEL 59
           ++Y  +L  ++  G  + +R G      +    R DL+      +     +  K +  EL
Sbjct: 5   NKYHCILEKIVCSGKTQTNRKG---NIRYLLNERLDLTPADLLEIFEGHNLARKKLKSEL 61

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
             F RG+ NV      G++ WD                  S+P Y    ++++  ++  +
Sbjct: 62  ELFTRGERNVDRYREAGITWWDYCGK----------TLVNSYPTY----LERLPPLIDRI 107

Query: 120 -RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
            R    S+ +++      +    A  PC  L QF +++G+L    YQRS D  LG+P +I
Sbjct: 108 NREKRNSKNYVLFLGETGVESNQA--PCLSLVQFQIEDGELVISAYQRSSDANLGLPADI 165

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
             Y L +  +A  I         T G+VH+Y N+ E  
Sbjct: 166 --YHLYS--IARQIELPLKSITLTFGNVHVYENNIENT 199


>gi|94496508|ref|ZP_01303085.1| Thymidylate synthase [Sphingomonas sp. SKA58]
 gi|94424254|gb|EAT09278.1| Thymidylate synthase [Sphingomonas sp. SKA58]
          Length = 78

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 41/78 (52%)

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246
           MLA     + GE I   GDVHLY NH    + QLSR P+  P + IN     +  +R ED
Sbjct: 1   MLAQQCDLEPGEVIWQGGDVHLYLNHAPLVEEQLSRIPQGAPTLRINRQPSSIFDYRIED 60

Query: 247 FTLRSYEPHAAILAKVSV 264
           F +  Y P A I A V+V
Sbjct: 61  FEVLDYSPQAHIAAPVAV 78


>gi|298386359|ref|ZP_06995915.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|298260736|gb|EFI03604.1| thymidylate synthase [Bacteroides sp. 1_1_14]
          Length = 214

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 20/213 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + ++ G   +     Q+    +    +     +  K +  EL 
Sbjct: 3   MNKYYRILDKILVAGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRSELQ 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ NV      G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 62  LFMQGERNVEKYREAGINWWDYCGS----------ILVNSYPTYFEKLPPLIAKINREKR 111

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDI-- 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           Y L  M  A  I          LG+VH+Y N+ 
Sbjct: 165 YHLYLM--ARQIELPLKSITLYLGNVHIYENNI 195


>gi|189427010|ref|YP_001950109.1| deoxyuridylate hydroxymethyltransferase [Ralstonia phage RSL1]
 gi|189233322|dbj|BAG41679.1| deoxyuridylate hydroxymethyltransferase [Ralstonia phage RSL1]
          Length = 414

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 25/171 (14%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW L G ++V +   +   +  E+ D    L   YG +WR    YD     Q+++I+ 
Sbjct: 110 EALWMLAGRNDVEFASYYAKQML-EYTDDGSTLNGAYGFRWRQHFGYD-----QLNAIID 163

Query: 118 SLRADPYSRRHIVSAWNVA-----------------LIDKMALP-PCHCLFQFYVDNGKL 159
            L+ +P SRR ++  W+ +                 L+++ +   PC+    F    GKL
Sbjct: 164 ELKKNPASRRCVLQMWDASREFYSREDSWAVRRESDLLNQGSKDLPCNTSVMFDAQLGKL 223

Query: 160 SCQLYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           +  +  RS D+  G    N+  +S+L   +A   G   G +     ++H+Y
Sbjct: 224 NMTVTNRSNDMIWGCYGANVVHFSMLHEYVAEKCGLPLGHYYQVSNNLHVY 274


>gi|328462354|gb|EGF34424.1| thymidylate synthase [Lactobacillus rhamnosus MTCC 5462]
          Length = 59

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 34/45 (75%)

Query: 7  LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
          +L+ V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKK H
Sbjct: 2  ILQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKYH 46


>gi|152002540|dbj|BAF73564.1| thymidylate synthase [Onion yellows phytoplasma OY-W]
          Length = 44

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/42 (57%), Positives = 31/42 (73%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF 42
          M+ YLDL R +++ GS R DRT  G +S FGYQMRF+L +GF
Sbjct: 1  MNTYLDLCRFILQKGSFRNDRTNTGNKSVFGYQMRFNLEEGF 42


>gi|296111884|ref|YP_003622266.1| putative thymidylate synthase protein [Leuconostoc kimchii IMSNU
           11154]
 gi|295833416|gb|ADG41297.1| putative thymidylate synthase protein [Leuconostoc kimchii IMSNU
           11154]
          Length = 332

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 16/210 (7%)

Query: 6   DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTK-KVHWKSVVHELLWFLR 64
           D+  H   F   R    G  +R    Y  R +      +   K K +      E+LW+L 
Sbjct: 17  DIYNHADFFNQPR----GFQSREKIAYHFRINQPVQRGIYNQKRKCNIIFNFAEVLWYLT 72

Query: 65  GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124
           G++ + Y+  +   + D   D     G  YG +     +  G    Q  ++   L  DP 
Sbjct: 73  GNNRLDYISYYNKKMPDYSMDGRILTGTAYGSKLF---NDKGQQSSQWQNVKDLLIKDPD 129

Query: 125 SRRHIVSAWNVALIDKMALP-----PCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           S+R ++  ++ +   ++A+P      C    QF++ +  L    Y R+ D F GI  ++ 
Sbjct: 130 SKRAVLQIFDGS---ELAIPNNLDVSCTLGLQFFIRDNHLDMIAYMRANDAFRGIVSDVF 186

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           S++ +  ++A  +    G++ H++G +H+Y
Sbjct: 187 SFTFIQELMARELHIPVGKYYHSVGTMHIY 216


>gi|187932666|ref|YP_001885547.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B]
 gi|187720819|gb|ACD22040.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B]
          Length = 333

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 17/164 (10%)

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIY-GVQWRSWPDYDGNVIDQIS 113
            + EL+W + G+          +++W+   +K    G IY G   +    + G   DQI 
Sbjct: 65  ALAELVWIINGEEKSDI-----INMWNPSLEKYAGRGDIYHGAYGKRIRSHFG--FDQIE 117

Query: 114 SIVQSLRADPYSRRHIVSAWNVAL---IDKMALP-----PCHCLFQFYVDNGKLSCQLYQ 165
              ++L+  P SR+ ++  ++  +   I+K  +P     PC+      V NGKL      
Sbjct: 118 KAYEALQNTPESRQVVIQIYDTKVDFPIEK-GIPQDEDIPCNICSLLKVRNGKLEWSQIM 176

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           RS DV LG+P+N   ++ L  +LA  +    G + H    +HLY
Sbjct: 177 RSNDVLLGMPYNFIQFTGLQEILAGWLELDLGSYNHYSDSLHLY 220


>gi|198276501|ref|ZP_03209032.1| hypothetical protein BACPLE_02696 [Bacteroides plebeius DSM 17135]
 gi|237710406|ref|ZP_04540887.1| predicted protein [Bacteroides sp. 9_1_42FAA]
 gi|198270589|gb|EDY94859.1| hypothetical protein BACPLE_02696 [Bacteroides plebeius DSM 17135]
 gi|229455868|gb|EEO61589.1| predicted protein [Bacteroides sp. 9_1_42FAA]
          Length = 212

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 24/218 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG--FPLLTTKKVHWKSVVHE 58
           M++Y   L  +++ G  + +R G   R  +    R  L+      +  +  +  K +  E
Sbjct: 1   MNKYYQTLDKILQTGKIQTNRKG---RIKYLLNERLMLTPADLLDIFESHGIARKKLKEE 57

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
           L  F++G  +V      G++ WD                  S+P Y   +   I+ I + 
Sbjct: 58  LKLFMQGVRDVEKYKEAGITWWDYCGH----------TLVNSYPTYFEKLPPLITRINRE 107

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
            R    S+ +++      +    A  PC  L QF +D G+L    YQRS D  LG+P +I
Sbjct: 108 KRN---SKNYVLFLGETGVESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADI 162

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
             Y L  M  A  +          LG+VH+Y N+ ++ 
Sbjct: 163 --YHLYLM--ARQVELPLKSITLDLGNVHIYENNIDRT 196


>gi|330899059|gb|EGH30478.1| thymidylate synthase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 113

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 11/104 (10%)

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           +G PFN+   + L  ++  + G+    F + +GD H+Y NH +  + Q++R P  +P+++
Sbjct: 10  IGTPFNLTEGAALLSLIGRLTGYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLV 69

Query: 232 IN---PNIVDLLSFRYE--------DFTLRSYEPHAAILAKVSV 264
           I+   P       ++ E        DFTL  Y+ H A+ A ++V
Sbjct: 70  ISDRVPEFAKTGVYQPEWLELIEPSDFTLEGYQHHPAMTAPMAV 113


>gi|189463012|ref|ZP_03011797.1| hypothetical protein BACCOP_03714 [Bacteroides coprocola DSM 17136]
 gi|260642224|ref|ZP_05414962.2| thymidylate synthase [Bacteroides finegoldii DSM 17565]
 gi|189430294|gb|EDU99278.1| hypothetical protein BACCOP_03714 [Bacteroides coprocola DSM 17136]
 gi|260623201|gb|EEX46072.1| thymidylate synthase [Bacteroides finegoldii DSM 17565]
          Length = 233

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 24/218 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG--FPLLTTKKVHWKSVVHE 58
           M++Y   L  +++ G  + +R G   R  +    R  L+      +  +  +  K +  E
Sbjct: 22  MNKYYQTLDKILQTGKIQTNRKG---RIKYLLNERLMLTPADLLDIFESHGIARKKLKEE 78

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
           L  F++G  +V      G++ WD                  S+P Y   +   I+ I + 
Sbjct: 79  LKLFMQGVRDVEKYKEAGITWWDYCGH----------TLVNSYPTYFEKLPPLITRINRE 128

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
            R    S+ +++      +    A  PC  L QF +D G+L    YQRS D  LG+P +I
Sbjct: 129 KRN---SKNYVLFLGETGVESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADI 183

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
             Y L  M  A  +          LG+VH+Y N+ ++ 
Sbjct: 184 --YHLYLM--ARQVELPLKSITLDLGNVHIYENNIDRT 217


>gi|154685031|ref|YP_001420192.1| hypothetical protein RBAM_005690 [Bacillus amyloliquefaciens FZB42]
 gi|154350882|gb|ABS72961.1| hypothetical protein RBAM_005690 [Bacillus amyloliquefaciens FZB42]
          Length = 336

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 87/182 (47%), Gaps = 6/182 (3%)

Query: 45  LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY 104
           L+++K +      E+LW+L G +++ ++  +   +     +K    G  YG +   + + 
Sbjct: 52  LSSRKTNIVFNFAEVLWYLSGSNDLDFISYYNKKMPSYSMNKKTLTGTAYGPKIFEFGNA 111

Query: 105 DGNVIDQISSIVQSLRADPYSRR---HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             N  ++I +++     D  S+R    I  A  + +++ + +  C    QF+V  G+L  
Sbjct: 112 KLNQWNRIKNLLTQEDID--SKRAFIQIFDASELFVLENIDVS-CTIGLQFFVREGELYM 168

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
               R+ D F G+  ++ S++ +  ++A  +  + GE+ H  G +H+Y++  E A   L 
Sbjct: 169 SSVMRANDAFRGMISDLFSFTFMQELMARELRLEVGEYFHNAGSIHIYDSDHEWAKTVLE 228

Query: 222 RS 223
            +
Sbjct: 229 EA 230


>gi|148550216|ref|YP_001270318.1| thymidylate synthase-like protein [Pseudomonas putida F1]
 gi|148514274|gb|ABQ81134.1| Thymidylate synthase-like protein [Pseudomonas putida F1]
          Length = 113

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 11/104 (10%)

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG PFN+   + L  +   + G+    F + +GD H+Y NH +  + QL R P   P+++
Sbjct: 10  LGTPFNLTEGAALLSLFGRLTGYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLV 69

Query: 232 IN---PNIVDLLSFRYE--------DFTLRSYEPHAAILAKVSV 264
           I+   P+  +   +  E        DF L  YE HA + A ++V
Sbjct: 70  ISDRVPSFAETGKYEPEWLEKIEPSDFWLEGYEHHAPMTAPMAV 113


>gi|254884961|ref|ZP_05257671.1| predicted protein [Bacteroides sp. 4_3_47FAA]
 gi|254837754|gb|EET18063.1| predicted protein [Bacteroides sp. 4_3_47FAA]
          Length = 214

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 20/213 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + +R G   +      +    +    +     +  K + +EL 
Sbjct: 3   MNKYYQVLDKILATGKTQSNRKG-NIQYLLNEVLVLTPADLLDIFEGHHIARKKLRNELH 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              +   S+P Y     +++  ++  + 
Sbjct: 62  LFMQGERQVEKYREAGINWWDYCG----------SILVNSYPTY----FEKLPPLIDKIN 107

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +  + ++ V       ++     PC  L QF +DNG+L    YQRS D  LG+P +I  
Sbjct: 108 REKRNSKNYVLFLGETGVESNQ-TPCLSLVQFQIDNGELVLSAYQRSSDANLGLPADI-- 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           Y L  M  A  I          LG+VH+Y N+ 
Sbjct: 165 YHLYLM--ARQIELPLKSITLYLGNVHIYENNI 195


>gi|154150064|ref|YP_001403682.1| thymidylate synthase [Candidatus Methanoregula boonei 6A8]
 gi|153998616|gb|ABS55039.1| thymidylate synthase [Methanoregula boonei 6A8]
          Length = 241

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 48/101 (47%)

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +DQI  I   LR  P SRR I   WN  + +K+   PC  L Q  + +GKL  ++  RS 
Sbjct: 104 VDQIEYIATKLRQSPVSRRAIAITWNPVIDEKLNDCPCLQLVQCVLRDGKLCMRVIFRSN 163

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           D+      N+ +   L   +A  +G + G + H     H+Y
Sbjct: 164 DMLTAAGANMYALVQLQKSIAERLGVECGTYTHISLVPHIY 204


>gi|219850761|ref|YP_002465193.1| thymidylate synthase, methanogen type [Methanosphaerula palustris
           E1-9c]
 gi|219545020|gb|ACL15470.1| thymidylate synthase, methanogen type [Methanosphaerula palustris
           E1-9c]
          Length = 244

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%)

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +DQI+ I++ L+  P +RR +   WN  + +++   PC  L Q  + +G L  ++  RS 
Sbjct: 104 VDQIAYIIRKLQEAPATRRALAITWNPVVDEQVKDCPCLQLVQCVIRDGALQMKVVFRSN 163

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           D+      N+ +   L +M+A  +G + G + H     H+Y
Sbjct: 164 DMLTASGANMFALVHLQLMIAEALGVRIGRYTHIALVPHVY 204


>gi|325953737|ref|YP_004237397.1| thymidylate synthase [Weeksella virosa DSM 16922]
 gi|323436355|gb|ADX66819.1| thymidylate synthase [Weeksella virosa DSM 16922]
          Length = 211

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 20/214 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  +IK G  + ++ G  T      ++    +    +     +    +  EL 
Sbjct: 1   MNKYHIILDKIIKKGKVQSNKKGNIT-YLLNQKLELKPTDLLEIFEEHGIARNKLKTELE 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F +G+        +G+  WD         GPI      S+P Y     +Q+  +++ + 
Sbjct: 60  LFTKGERLTERYRENGIEWWDYC-------GPIL---VNSYPTY----FEQLPDLIKKIN 105

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +  + ++ V       ++     PC  L QF ++ GKL    YQRS D  LG+P +I  
Sbjct: 106 KEKRNSKNYVLFLGRTDVESNQ-QPCLSLVQFQIEKGKLIISAYQRSSDASLGLPADI-- 162

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
           Y L   +++  I          L +VH+Y N+ E
Sbjct: 163 YHL--YLISRQINLPLKSITLMLANVHIYENNVE 194


>gi|124484937|ref|YP_001029553.1| hypothetical protein Mlab_0109 [Methanocorpusculum labreanum Z]
 gi|124362478|gb|ABN06286.1| thymidylate synthase [Methanocorpusculum labreanum Z]
          Length = 239

 Score = 55.8 bits (133), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQI  I+  LR  P SRR +   W   +  K+A  PC  L Q  V +GKL+ ++  RS D
Sbjct: 104 DQIQYIIDKLRECPVSRRAVAVTWCPPVDAKLADCPCLQLVQCVVRDGKLNMKIVFRSND 163

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           +      N+ + + L   +A  IG + G + H     H+Y
Sbjct: 164 MLSAAGSNMFALAKLQEYIAEKIGVEVGTYTHISLVPHVY 203


>gi|32034581|ref|ZP_00134737.1| COG0207: Thymidylate synthase [Actinobacillus pleuropneumoniae
          serovar 1 str. 4074]
          Length = 133

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 1  MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
          M QYLDL   ++  G     +RTG    +     + ++++ G FPL+TT++  WK+ + E
Sbjct: 1  MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60

Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD 87
          LL ++RG  N +   + G   WD  A+++
Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQN 89


>gi|49247552|gb|AAT58678.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. GRW2]
          Length = 78

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRS--------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR         + +YD   +DQ+ +I+  ++ DP SRR ++ AWNV  +DK
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMYDNYDNKGVDQVKNIIDLIKNDPNSRRILLCAWNVKDLDK 78


>gi|110006193|gb|ABG48599.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PA]
          Length = 78

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRS--------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR         + +Y+   IDQ+ +I+  ++ DP SRR I+ AWNV  +DK
Sbjct: 19  DLGPIYGFQWRHFGAEYSDMYDNYENKGIDQLKNIINLIKNDPTSRRIILCAWNVKDLDK 78


>gi|110006229|gb|ABG48617.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT]
 gi|110006231|gb|ABG48618.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU]
 gi|112293883|gb|ABI15067.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT]
 gi|112293885|gb|ABI15068.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT]
 gi|112293887|gb|ABI15069.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU]
 gi|112293889|gb|ABI15070.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU]
          Length = 78

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+SAWNV  +DK
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILSAWNVKDLDK 78


>gi|301057695|ref|ZP_07198768.1| putative thymidylate synthase [delta proteobacterium NaphS2]
 gi|300448156|gb|EFK11848.1| putative thymidylate synthase [delta proteobacterium NaphS2]
          Length = 228

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 56/113 (49%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           QI+ +++  R D +               ++  PPC       + +GKL   +Y RS D+
Sbjct: 106 QITEVIRMYREDGFGTNQAYMTVGDPKAIQLVDPPCLRGIDTRIKDGKLHFIVYFRSWDL 165

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           + G+P N+ +  LL   +AS IG + GE I +   +HLY+  +E A L+  ++
Sbjct: 166 WNGLPANLGAIQLLKEYMASSIGVEDGEIIASSKGLHLYDYVWELAQLRTCKT 218


>gi|15668688|ref|NP_247487.1| thymidylate synthase [Methanocaldococcus jannaschii DSM 2661]
 gi|3219867|sp|Q57931|TYSY_METJA RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|1591214|gb|AAB98502.1| thymidylate synthase (thyA) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 222

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGK 158
           Y    I+QI  I++ L     SRR +   WN  +      D+    PC  L QF + NGK
Sbjct: 92  YADEKINQIDYIIEKLNQQKNSRRAVAITWNPKIDIEVSRDERGSVPCLQLVQFLIRNGK 151

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           L   +  RS D  L    N      L   +A  +G  YG + H    +H+Y
Sbjct: 152 LYQTVIFRSNDALLAFVSNAIGLITLGEYIAKKVGVGYGTYTHHAISMHIY 202


>gi|73668429|ref|YP_304444.1| thymidylate synthase [Methanosarcina barkeri str. Fusaro]
 gi|121725683|sp|Q46E28|TYSY_METBF RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|72395591|gb|AAZ69864.1| thymidylate synthase [Methanosarcina barkeri str. Fusaro]
          Length = 217

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 4/124 (3%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + R+W       +DQI  +++ L+ +P SRR I   W   +  K+   PC  L  F 
Sbjct: 91  YGQRLRNW----HGKVDQIDYVIEKLQQNPTSRRAIAVTWIPPVDTKVNEVPCMMLDDFK 146

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           + +GK+      RS D     P N+   S L   +A  +G + G         H+Y++ +
Sbjct: 147 IRDGKIHLTTLFRSHDFGGAYPANLYGLSKLLEYVADKVGTKPGTITTISISAHIYDHDW 206

Query: 214 EQAD 217
           +  +
Sbjct: 207 DMVE 210


>gi|110006195|gb|ABG48600.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|110006197|gb|ABG48601.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PC]
 gi|112293821|gb|ABI15036.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293823|gb|ABI15037.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293825|gb|ABI15038.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293827|gb|ABI15039.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293829|gb|ABI15040.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293831|gb|ABI15041.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293833|gb|ABI15042.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293835|gb|ABI15043.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
          Length = 78

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRS--------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR         + +Y+   IDQ+ +I+  ++ DP SRR I+ AWNV  +D+
Sbjct: 19  DLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNDPTSRRIILCAWNVKDLDQ 78


>gi|110006199|gb|ABG48602.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pD]
 gi|110006201|gb|ABG48603.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pE]
 gi|112293837|gb|ABI15044.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pD]
          Length = 78

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRS--------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR         + +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DK
Sbjct: 19  DLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDK 78


>gi|323941565|gb|EGB37746.1| thymidylate synthase [Escherichia coli E482]
          Length = 52

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 32/51 (62%)

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +Q  LQLSR PR LP++II      +  +R+EDF +  Y+PH  I A V++
Sbjct: 2   DQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 52


>gi|110006233|gb|ABG48619.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pV]
          Length = 78

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DK
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDK 78


>gi|126178499|ref|YP_001046464.1| thymidylate synthase [Methanoculleus marisnigri JR1]
 gi|125861293|gb|ABN56482.1| thymidylate synthase [Methanoculleus marisnigri JR1]
          Length = 241

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 46/101 (45%)

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +DQI  I + L     SRR +   WN  + + +   PC  L Q  + NGKL  ++  RS 
Sbjct: 104 VDQIDYIARKLEQAANSRRAVAVTWNPVVDENLDDCPCLQLVQCLLRNGKLQMKVVFRSN 163

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           D+      N+ +   L  M+A  +G   G + H     H+Y
Sbjct: 164 DILSAAGSNMYALVRLQKMIADRLGVPCGRYTHIALVPHIY 204


>gi|220906251|ref|YP_002481562.1| thymidylate synthase [Cyanothece sp. PCC 7425]
 gi|219862862|gb|ACL43201.1| thymidylate synthase [Cyanothece sp. PCC 7425]
          Length = 508

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 12/157 (7%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + RSW   D     QI  +++ L  D  S R ++S W+VA  +  A PPC       
Sbjct: 270 YGQRLRSWFGRD-----QIQQVIEKLSEDLDSARAVMSLWDVADHEAQASPPCLNHLWVR 324

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG------FQYGEFIHTLGDVH 207
           +  G+LS     RS D+F   P N      L   L   I          G  I      H
Sbjct: 325 IVEGELSLTATFRSNDMFSAWPANAMGLRALQQHLRDRISQNIAQPLHLGPLITLSQSAH 384

Query: 208 LYNNHFEQAD-LQLSRSPRTLPQMIINPNIVDLLSFR 243
           +Y++ +E AD L  ++ P   P+   +P    L+S  
Sbjct: 385 IYDDCWENADRLLQTQYPHCQPRTYSDPAGSFLISLE 421


>gi|332879334|ref|ZP_08447031.1| hypothetical protein HMPREF9074_02783 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332682754|gb|EGJ55654.1| hypothetical protein HMPREF9074_02783 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 177

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 19/164 (11%)

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           K +  EL  F++G+ +V      G++ WD                  S+P Y   +   I
Sbjct: 17  KKLKTELGLFMQGERDVERYREAGITWWDYCGQ----------TLVNSYPTYFEKLPPLI 66

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
           + I +  R    S+ +++      +    A  PC  L QF +D G+L    YQRS D  L
Sbjct: 67  AQINEEKRN---SKNYVLFLGATGVETNQA--PCLSLVQFQIDEGELVVSAYQRSSDANL 121

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           G+P +I  Y L  M  +  I          LG+VH+Y N+  + 
Sbjct: 122 GLPSDI--YHLYLM--SRQIDLPLKSITLDLGNVHIYENNISRT 161


>gi|282599234|ref|YP_003358546.1| putative thymidylate synthase [Shigella phage phiSboM-AG3]
 gi|226973540|gb|ACO94293.1| putative thymidylate synthase [Shigella phage phiSboM-AG3]
          Length = 348

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 29/182 (15%)

Query: 54  SVVHELLWFLRGDSNVSYLHR---HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVID 110
           + + E  W L G +++ +L R      +  D+            GV WR+          
Sbjct: 67  AAIGETFWVLSGRNDIKFLSRVLPRAANFSDD------------GVTWRAAYGPRLYAHG 114

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP-------------CHCLFQFYVDNG 157
           Q+ S++  LR +P +R+  ++ ++ AL     L               C+    F + +G
Sbjct: 115 QLDSVINRLRKNPNTRQAYLTIYDPALDSDAGLAKFSESGEAKTKDMVCNLALLFAIVDG 174

Query: 158 KLSCQLYQRSGDVFLGIP-FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           +L+  +  RS DV  G+   N   +S+L  ++A V+    G++     ++H YNN   Q 
Sbjct: 175 RLNLTVINRSQDVLWGMSSINFIEFSILQEVIAQVLDVDVGQYKLFSNNLHYYNNEVSQK 234

Query: 217 DL 218
            L
Sbjct: 235 QL 236


>gi|110006227|gb|ABG48616.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pS]
          Length = 78

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         +Y+   +DQ+ +I+  ++ +P SRR I+ AWNV  +DK
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKDLDK 78


>gi|110006225|gb|ABG48615.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR]
 gi|112293879|gb|ABI15065.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR]
 gi|112293881|gb|ABI15066.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR]
          Length = 78

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         +Y+   +DQ+ +I+  ++ +P SRR I+ AWNV  +DK
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKDLDK 78


>gi|25091474|sp|Q8THH4|TYSY_METAC RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
          Length = 217

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 4/124 (3%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + R+W +     +DQI  +++ L+  P SRR     W   +  K+   PC  L  F 
Sbjct: 91  YGQRLRNWNEE----VDQIEYVIEKLQESPTSRRATAVTWIPPVDTKVNEVPCMILDDFK 146

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           + +GK+      RS D     P N+   S L   +A  +G + G         H+Y++ +
Sbjct: 147 IRDGKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAGRVGVEPGMITTVSISAHVYDHDW 206

Query: 214 EQAD 217
           +  +
Sbjct: 207 DMVE 210


>gi|167841922|ref|ZP_02468606.1| thymidylate synthase [Burkholderia thailandensis MSMB43]
          Length = 288

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 20/224 (8%)

Query: 6   DLLR----HVIKFGSDRRDRTGVGTRS-TFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           DL+R    +++K G   + R G   ++    Y ++   S+   L    K   + +  ELL
Sbjct: 28  DLVRQGIHNIVKEGRKIKSRAGDAMQAYGVNYILKDPRSRVHSLRNGAK---RYLCRELL 84

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYG--VQWRSWPDYDGNVIDQISSIVQS 118
            +  G         +    W    DKDG +   YG  V +     Y GN   Q + IV  
Sbjct: 85  AYFSGSLKAENGLANASKFWMTLTDKDGNVNSNYGYYVFYEPVEKY-GN---QYNWIVSM 140

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           L+++  SRR I++             PC    QF++    L C+   RS DV  G+P+++
Sbjct: 141 LKSNQDSRRAIININQNYHKSDTKDFPCTIGMQFFIRENHLFCETISRSTDVITGLPYDM 200

Query: 179 ASYSLLTMMLASVI------GFQYGEFIHTLGDVHLYNNHFEQA 216
             +S +  ++ S +        Q G  I       +Y+N  E+A
Sbjct: 201 GFFSFVHELVHSDLVSQGYDDLQLGSTIMKTTFTQIYDNAMEKA 244


>gi|20093327|ref|NP_619402.1| thymidylate synthase [Methanosarcina acetivorans C2A]
 gi|19918687|gb|AAM07882.1| thymidylate synthase [Methanosarcina acetivorans C2A]
          Length = 230

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 4/124 (3%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + R+W +     +DQI  +++ L+  P SRR     W   +  K+   PC  L  F 
Sbjct: 104 YGQRLRNWNEE----VDQIEYVIEKLQESPTSRRATAVTWIPPVDTKVNEVPCMILDDFK 159

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           + +GK+      RS D     P N+   S L   +A  +G + G         H+Y++ +
Sbjct: 160 IRDGKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAGRVGVEPGMITTVSISAHVYDHDW 219

Query: 214 EQAD 217
           +  +
Sbjct: 220 DMVE 223


>gi|110006203|gb|ABG48604.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pF]
          Length = 78

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRS--------WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR         + +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +D+
Sbjct: 19  DLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDQ 78


>gi|110006205|gb|ABG48605.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum]
 gi|110006207|gb|ABG48606.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PH]
 gi|110006209|gb|ABG48607.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PI]
 gi|110006213|gb|ABG48609.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pK]
 gi|110006215|gb|ABG48610.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pL]
 gi|110006217|gb|ABG48611.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM]
 gi|110006219|gb|ABG48612.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN]
 gi|112293839|gb|ABI15045.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293841|gb|ABI15046.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293843|gb|ABI15047.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293845|gb|ABI15048.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293847|gb|ABI15049.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293849|gb|ABI15050.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293851|gb|ABI15051.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum]
 gi|112293853|gb|ABI15052.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum]
 gi|112293855|gb|ABI15053.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293857|gb|ABI15054.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293859|gb|ABI15055.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293861|gb|ABI15056.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293863|gb|ABI15057.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293865|gb|ABI15058.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293867|gb|ABI15059.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293869|gb|ABI15060.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293871|gb|ABI15061.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM]
 gi|112293873|gb|ABI15062.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM]
 gi|112293875|gb|ABI15063.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN]
 gi|112293877|gb|ABI15064.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN]
          Length = 78

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +D+
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDQ 78


>gi|296108807|ref|YP_003615756.1| thymidylate synthase, methanogen type [Methanocaldococcus infernus
           ME]
 gi|295433621|gb|ADG12792.1| thymidylate synthase, methanogen type [Methanocaldococcus infernus
           ME]
          Length = 212

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 1/117 (0%)

Query: 94  YGVQWRSWPDYDGNVI-DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           Y  + R +P YD  +  DQ+S +++ L+ +  SRR ++S W   +  K+   PC     F
Sbjct: 82  YYERIREYPSYDRKLKNDQLSYVIEKLKNNSTSRRAVISLWQPFIDQKVKDVPCLQHIGF 141

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
            +   KL   +  RS D+ L    N      L  ++A  +  +  E+ H + + H+Y
Sbjct: 142 QLREDKLIMSVLFRSNDILLAFHSNALGLISLGELVAKSLEVELKEYNHFIYNAHIY 198


>gi|159905677|ref|YP_001549339.1| thymidylate synthase [Methanococcus maripaludis C6]
 gi|159887170|gb|ABX02107.1| thymidylate synthase, methanogen type [Methanococcus maripaludis
           C6]
          Length = 210

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQI  IV  L+    SRR +   WN  +   +   PC  + QF V + KL   +  RS D
Sbjct: 100 DQIEYIVNKLKEQINSRRAVAITWNPYIDQTVKDVPCLQIVQFLVRDNKLYQTVLFRSND 159

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
            FL    N      L  M+A  +G +  ++ H    +H+Y+ 
Sbjct: 160 AFLAFHANAIGLIALGEMVAEKLGIELVKYTHHSVSMHVYSE 201


>gi|110006211|gb|ABG48608.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pJ]
          Length = 78

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +D+
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDQ 78


>gi|45358942|ref|NP_988499.1| thymidylate synthase [Methanococcus maripaludis S2]
 gi|45047808|emb|CAF30935.1| Thymidylate synthase [Methanococcus maripaludis S2]
          Length = 212

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQI  IV  L+    SRR +   WN  +   +   PC  + QF V + KL   +  RS D
Sbjct: 100 DQIEYIVNKLKEQINSRRAVAITWNPYIDQSVKDVPCLQIVQFLVRDNKLYQTVLFRSND 159

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
            FL    N      L  M+A  +G +  ++ H    +H+Y+
Sbjct: 160 AFLAFHANAIGLIALGEMVAEKLGIELVKYTHHSVSMHVYS 200


>gi|11499629|ref|NP_070871.1| thymidylate synthase, putative [Archaeoglobus fulgidus DSM 4304]
 gi|2648479|gb|AAB89199.1| thymidylate synthase, putative [Archaeoglobus fulgidus DSM 4304]
          Length = 480

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 16/159 (10%)

Query: 84  ADKDGEL-------GPIYGVQWRS-WPDYDGNVIDQISSIVQSLRADPYSRRHIVS---A 132
           A  DGE+       G  Y    R+ + D D   +DQ+  +++ L+ D   R   V     
Sbjct: 322 AKLDGEVRRSILKEGEEYTYAERARYCDRDDVKVDQLYKVIEKLKEDSCRRDCYVGISRP 381

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           W++ L D+   PPC   +QF     +L    Y RS D +  +  N+ +++LLT  +A + 
Sbjct: 382 WDL-LSDE---PPCLRGYQFSKYGDELLGTFYMRSNDAYGAMHANMYAFALLTKYVAELT 437

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQA-DLQLSRSPRTLPQM 230
           GF+   + H   D H+Y   F+   ++    SP  L ++
Sbjct: 438 GFKSYRYNHFALDAHIYAEFFDAVREILYPESPSYLDKV 476


>gi|330507653|ref|YP_004384081.1| thymidylate synthase, methanogen type [Methanosaeta concilii GP-6]
 gi|328928461|gb|AEB68263.1| thymidylate synthase, methanogen type [Methanosaeta concilii GP-6]
          Length = 245

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 51/121 (42%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + R+W       +DQI   +Q L+  P +RR     W   +  +    PC  +  F 
Sbjct: 113 YGERLRAWRLPGTPPLDQIDMAIQRLKESPATRRATSVTWIPPVDGERNEVPCMIVDDFK 172

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           +  G+L   ++ RS D     P N+   + L    A  +G Q G    T    H+Y + +
Sbjct: 173 LRGGRLHLAIFFRSHDFAGAYPANLYGLARLLEYAAREVGAQPGSISTTSSSAHIYEHDW 232

Query: 214 E 214
           +
Sbjct: 233 D 233


>gi|49247550|gb|AAT58677.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. SGS1]
          Length = 73

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +D+
Sbjct: 14  DLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDQ 73


>gi|110006221|gb|ABG48613.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pO]
          Length = 78

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         +Y+   +DQ+ +I+  ++ +P SRR I+ AWNV  +D+
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKDLDQ 78


>gi|49247528|gb|AAT58666.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           GRW1]
 gi|49247530|gb|AAT58667.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           GRW8]
 gi|49247532|gb|AAT58668.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           BRW1]
 gi|49247534|gb|AAT58669.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           GRW5]
          Length = 78

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         DY    IDQ+ +++  ++ DP +RR I+ AWN   +DK
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDDYTDKGIDQLKNVINLIKTDPTNRRIILCAWNPKDLDK 78


>gi|298674842|ref|YP_003726592.1| thymidylate synthase, methanogen type [Methanohalobium evestigatum
           Z-7303]
 gi|298287830|gb|ADI73796.1| thymidylate synthase, methanogen type [Methanohalobium evestigatum
           Z-7303]
          Length = 217

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 4/124 (3%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + R+W D     IDQIS ++  L     +RR     W   +  K+   PC  +  F 
Sbjct: 91  YGQRLRNWNDE----IDQISYVIDKLTESSSTRRATAVTWVPPIDTKVDEVPCMIIDDFK 146

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           + NGKL      RS D     P N+   S L   +A   G   G+        H+Y + +
Sbjct: 147 IRNGKLHLTTLFRSHDFAGAYPANLYGLSGLLRYVAEKSGVSTGKITTISVSAHIYEHDW 206

Query: 214 EQAD 217
           ++ +
Sbjct: 207 DKIE 210


>gi|90580552|ref|ZP_01236357.1| thymidylate synthase [Vibrio angustum S14]
 gi|90438210|gb|EAS63396.1| thymidylate synthase [Photobacterium angustum S14]
          Length = 99

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%)

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPRTLPQ 229
            LG+ FN      L  ++A + G + G+  H + + H+Y +  E   D+QL R+P   PQ
Sbjct: 1   MLGLNFNQVQVFTLLALMAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKRTPFASPQ 60

Query: 230 MIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
           + IN  I  L         +DF +  YE H AI    SV
Sbjct: 61  LKINQKIKSLEDLETWVTLDDFEVVGYEHHDAIQYPFSV 99


>gi|108863583|gb|ABG22166.1| DHFR-TS [Haemoproteus lanii]
          Length = 73

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         DY    +DQ+ +++  ++ DP SRR I+ AWN   ++K
Sbjct: 14  DLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPISRRIILCAWNPKDLEK 73


>gi|150399440|ref|YP_001323207.1| thymidylate synthase [Methanococcus vannielii SB]
 gi|150012143|gb|ABR54595.1| thymidylate synthase [Methanococcus vannielii SB]
          Length = 212

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 47/107 (43%)

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           D      DQI  IV  L+++  SRR +   WN  +  ++   PC    QF + + KL   
Sbjct: 93  DLKNRKFDQIEYIVNKLKSEKNSRRAVSITWNPYIDTEVKDVPCLQFVQFLIRDNKLYQT 152

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           +  RS D FL    N      L  ++A  +G +   + H    +H+Y
Sbjct: 153 VLFRSNDAFLAFHANAIGLISLGELIAEKLGIELVRYTHHSVSMHVY 199


>gi|108863585|gb|ABG22167.1| DHFR-TS [Haemoproteus lanii]
          Length = 73

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         DY    +DQ+ +++  ++ DP SRR I+ AWN   ++K
Sbjct: 14  DLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPTSRRIILCAWNPKDLEK 73


>gi|326804560|ref|YP_004327431.1| Thymidylate synthase [Salmonella phage Vi01]
 gi|301795210|emb|CBW37928.1| Thymidylate synthase [Salmonella phage Vi01]
          Length = 346

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 34/197 (17%)

Query: 54  SVVHELLWFLRGDSNVSYLHR---HGVSIWDEWADKDGELGPIYGVQWRS--WPDYDGNV 108
           + + E  W L G +++ +L +      +  D+            GV WR    P    N 
Sbjct: 67  AAIGETFWVLSGRNDIRFLSKVLPRAANFSDD------------GVTWRGAYGPRLYNN- 113

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP-------------CHCLFQFYVD 155
             Q+ S++  LR +P +R+  ++ ++ AL     L               C+    F + 
Sbjct: 114 -GQLDSVISRLRNNPNTRQAYLTIYDPALDSDEGLAAHSETGEAKTKDMICNLALLFSIT 172

Query: 156 NGKLSCQLYQRSGDVFLGIP-FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
            G+L+  +  RS DV  G+   N   +S+L  +LA V+  + G +     ++H YNN   
Sbjct: 173 EGRLNITVINRSQDVLWGMSSINFIEFSILQEVLAKVLNVEVGYYKLFSNNLHYYNNEVS 232

Query: 215 QADL-QLSRSPRTLPQM 230
           +  L  +++  +T   M
Sbjct: 233 RKQLGGITKKTKTSSGM 249


>gi|110006223|gb|ABG48614.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pP]
          Length = 78

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         +Y+   +DQ+ +I+  ++ +P SRR ++ AWNV  +D+
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRILLCAWNVKDLDQ 78


>gi|322805078|emb|CBZ02638.1| thymidylate synthase [Clostridium botulinum H04402 065]
          Length = 196

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW+L G +++ Y+  +  ++     D     G  YG +  S   Y  N I+Q + I++
Sbjct: 65  EALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFS---YGYNKINQWNRIIK 121

Query: 118 SLRADPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
             + DP ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI 
Sbjct: 122 LFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGII 181

Query: 176 FNIASYSLLTMMLAS 190
            ++ S++ +    ++
Sbjct: 182 SDVFSFTFIQEFFSN 196


>gi|190702141|gb|ACE75860.1| putative thymidylate synthase-like protein [uncultured virus]
          Length = 59

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 88  GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           G+LGP+YG QWR++     N +DQI  ++  ++ +P+    +V++WNV+ + KMAL
Sbjct: 9   GDLGPVYGHQWRNF-----NGVDQIQQLINKIQDNPFRTDLMVNSWNVSDLPKMAL 59


>gi|108863587|gb|ABG22168.1| DHFR-TS [Haemoproteus lanii]
          Length = 70

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 8/54 (14%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           +LGPIYG QWR +         DY    +DQ+ +++  ++ DP SRR I+ AWN
Sbjct: 14  DLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPTSRRIILCAWN 67


>gi|288931042|ref|YP_003435102.1| thymidylate synthase [Ferroglobus placidus DSM 10642]
 gi|288893290|gb|ADC64827.1| thymidylate synthase [Ferroglobus placidus DSM 10642]
          Length = 424

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 8/110 (7%)

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVS---AWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
           D   +DQ+   ++ LR +PY R   V     W++   D    PPC   +QF +   K   
Sbjct: 300 DEKKVDQLYECIKKLRENPYRRDCYVGISRVWDLTSDD----PPCLRGYQF-LKTRKFMG 354

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
             Y RS D++  +  N+ ++SLLT  ++ +I  +  ++ H   D H+Y  
Sbjct: 355 IFYMRSNDIYGAMHANMYAFSLLTDYVSQLINEREYKYYHFSVDAHIYEE 404


>gi|134045244|ref|YP_001096730.1| thymidylate synthase [Methanococcus maripaludis C5]
 gi|132662869|gb|ABO34515.1| Thymidylate synthase [Methanococcus maripaludis C5]
          Length = 210

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 45/102 (44%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQI  IV  L+    SRR I   WN  +   +   PC  + QF + + KL   +  RS D
Sbjct: 100 DQIDYIVNKLKEQINSRRAIAITWNPYIDQTVKDVPCLQIVQFLIRDNKLYQTVLFRSND 159

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
            FL    N      L  M+A  +  +  ++ H    +H+Y+ 
Sbjct: 160 AFLAFHANAIGLIALGEMVAEKLEIELAKYTHHSVSMHVYSE 201


>gi|21227339|ref|NP_633261.1| thymidylate synthase [Methanosarcina mazei Go1]
 gi|25091471|sp|Q8PXI1|TYSY_METMA RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|20905695|gb|AAM30933.1| Thymidylate synthase [Methanosarcina mazei Go1]
          Length = 217

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 4/124 (3%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + R+W   +G V DQI  +++ L+  P SRR     W   +  K+   PC  L  F 
Sbjct: 91  YGQRLRNW---NGEV-DQIEYVIEKLKESPTSRRATAVTWIPPVDTKVNEVPCMILDDFK 146

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           + + K+      RS D     P N+   S L   +A  +G + G         H+Y++ +
Sbjct: 147 IRDEKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAEKVGVEPGVITTVSISAHVYDHDW 206

Query: 214 EQAD 217
           +  +
Sbjct: 207 DMVE 210


>gi|309790377|ref|ZP_07684942.1| thymidylate synthase [Oscillochloris trichoides DG6]
 gi|308227569|gb|EFO81232.1| thymidylate synthase [Oscillochloris trichoides DG6]
          Length = 484

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + R+   +DG  IDQ+++I   LR+   SRR +   WN       A PPC  L Q  
Sbjct: 258 YGARLRT---FDGQ-IDQVAAICADLRSAATSRRALAVLWNPHQDAGSANPPCLNLVQAR 313

Query: 154 VDNG------KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI-GFQYGEFIHTLGDV 206
           +         +L   +Y RS D+F   P N  +   L  ++A  + G + G+        
Sbjct: 314 LRPAPGEATPRLFLTVYFRSHDIFRAWPANAYALRALQALIAEELGGVELGDLAILSHSA 373

Query: 207 HLYNNHFEQADLQLSRSPRTL-PQMIINPNIVDLLSFRYEDFTLRSYEP 254
           H+Y + +E A   L++  R   P++I +     ++       ++R Y P
Sbjct: 374 HIYAHDWEAAAELLAQHYRPQNPRLIHDQRGAFVIVLEPPVISVRHYSP 422


>gi|49247538|gb|AAT58671.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT16]
 gi|49247540|gb|AAT58672.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT7]
          Length = 73

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         DY    +DQ+ +++  L+ DP +RR I+ AWN   ++K
Sbjct: 14  DLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVINLLKTDPTNRRIILCAWNPKDLEK 73


>gi|116754022|ref|YP_843140.1| thymidylate synthase [Methanosaeta thermophila PT]
 gi|116665473|gb|ABK14500.1| Thymidylate synthase [Methanosaeta thermophila PT]
          Length = 215

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 4/121 (3%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + RSW   +G V DQI+ IV  L+ +P +RR     W   +  K    PC  +  F 
Sbjct: 87  YGERLRSW---NGEV-DQIAEIVNRLKRNPRTRRATAVTWIPQVDHKREEVPCMVVCDFK 142

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           + + +L+  +  RS D     P N+ + S L   ++   G   G         H+Y + +
Sbjct: 143 IRSSRLNLTVMFRSHDFAGAYPANVYALSKLLHHVSRESGSVPGSLTTLSASAHIYEHDW 202

Query: 214 E 214
           +
Sbjct: 203 D 203


>gi|172035298|ref|YP_001801799.1| hypothetical protein cce_0382 [Cyanothece sp. ATCC 51142]
 gi|171696752|gb|ACB49733.1| hypothetical protein cce_0382 [Cyanothece sp. ATCC 51142]
          Length = 502

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           I D+   K+G +   YG + RSW + D     QI   +  L  D  S R ++S W+V   
Sbjct: 263 ILDDAPQKEG-VKYTYGQRLRSWFERD-----QIQQAIDKLITDKDSSRVVMSLWDVKDY 316

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI------ 192
           +    PPC       + + +LS     RS D+F   P N      L   +   I      
Sbjct: 317 ENNDSPPCLNHIWVRIVDNELSLTATFRSNDMFSAWPANAMGLRALQKHIIEQINKTSNH 376

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQAD 217
            FQ+G  I      H+Y++ +E AD
Sbjct: 377 NFQFGPLIIISQSAHIYSDCWEHAD 401


>gi|162135099|ref|YP_001595840.1| hypothetical protein [Pseudomonas phage YuA]
 gi|161513946|emb|CAO77772.1| hypothetical protein [Pseudomonas phage YuA]
          Length = 351

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW L G ++V Y+ R  V     ++D        YG +WR          DQ+  I+ 
Sbjct: 68  ESLWMLGGRNDVEYVARF-VDRMRSYSDDGLTFHGAYGFRWRQ-----HFFEDQLPKIIA 121

Query: 118 SLRADPYSRRHIVSAWNV-ALIDKMALP-PCH--CLFQFYVDNGKLSCQLYQRSGDVFLG 173
           +L+A+   RR ++S W+  A + +     PC+   +FQ   D G+L   +  RS D+  G
Sbjct: 122 ALKANRDDRRQVLSMWDADADLGRQGKDLPCNLQAIFQIACD-GRLDMTVTNRSNDLIWG 180

Query: 174 I-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
               N   +S L   +A  +G + G +     + H Y  
Sbjct: 181 AYGANAVHFSYLHEYVARSVGVEQGIYRQVSANFHAYEE 219


>gi|312136483|ref|YP_004003820.1| thymidylate synthase, methanogen type [Methanothermus fervidus DSM
           2088]
 gi|311224202|gb|ADP77058.1| thymidylate synthase, methanogen type [Methanothermus fervidus DSM
           2088]
          Length = 223

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGE-LGPIYGVQWRS 100
           FP+ T K++   S+  +  W  RGD    Y         D++  KD +     YG + R 
Sbjct: 55  FPISTNKEILL-SIPKDYYW--RGDKLSKYT--------DQFLKKDKKGFVYTYGNRLR- 102

Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
               D   +DQI +I++ L+    SRR     W+  +  K    PC     F + N KL 
Sbjct: 103 ----DHFSVDQIKAIIKRLKKCKKSRRATAVTWDPKIDFKNEEVPCMISIDFKIRNNKLH 158

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF-IHTLGDVHLYNNHFEQAD 217
                RS D++     N A+ ++L   ++  +  + G   IH++   H+Y   F+ A+
Sbjct: 159 TTGIWRSHDIYQAWLPNAAALAILAKYISDKLNIKVGPLAIHSIS-AHIYEYCFDDAE 215


>gi|254516470|ref|ZP_05128529.1| putative thymidylate synthase [gamma proteobacterium NOR5-3]
 gi|219674893|gb|EED31260.1| putative thymidylate synthase [gamma proteobacterium NOR5-3]
          Length = 191

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 2/113 (1%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           YD N IDQ   +V  LR    ++   +S     L    A  PC C+    + NGKL+ Q 
Sbjct: 54  YDMNGIDQFDWMVGRLRNKSETKSAAISLLVPGL--NQANLPCLCVVDSKIRNGKLNLQF 111

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           + RS +VF     N+ + + L   LA+ +G   G     +   H+Y    E+A
Sbjct: 112 FFRSQNVFGRQYANLVAIARLQEKLAASVGCDIGILKGYIASAHIYEYDLEEA 164


>gi|49247544|gb|AAT58674.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus majoris]
          Length = 78

 Score = 48.5 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         DY    +DQ+ +++  ++ DP +RR I+ AWN   ++K
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKNDPKNRRIILCAWNPKDLEK 78


>gi|49247536|gb|AAT58670.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT2]
 gi|49247542|gb|AAT58673.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT1]
 gi|86795021|gb|ABD15365.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT13]
 gi|86795023|gb|ABD15366.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT10]
          Length = 73

 Score = 48.5 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         DY    +DQ+ +++  ++ DP +RR I+ AWN   ++K
Sbjct: 14  DLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVINLIKTDPTNRRIILCAWNPKDLEK 73


>gi|150402548|ref|YP_001329842.1| thymidylate synthase [Methanococcus maripaludis C7]
 gi|150033578|gb|ABR65691.1| thymidylate synthase [Methanococcus maripaludis C7]
          Length = 210

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 45/100 (45%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQI  IV  L+    SRR +   WN  +   +   PC  + QF + + KL   +  RS D
Sbjct: 100 DQIEYIVYKLKEQINSRRAVAITWNPYIDQTVKDVPCLQIVQFLIRDNKLYQTVLFRSND 159

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
            FL    N      L  ++A  +G +  ++ H    +H+Y
Sbjct: 160 AFLAFHANAIGLIALGELVAEKLGIELVKYTHHSVSMHVY 199


>gi|282899587|ref|ZP_06307551.1| hypothetical protein CRC_01035 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195466|gb|EFA70399.1| hypothetical protein CRC_01035 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 510

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 15/156 (9%)

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
           SYL  +   + D+  D++G +   YG + RSW   D     QI  ++  L  DP S R +
Sbjct: 255 SYLPEYISQVLDDAPDQEG-VKYTYGKRLRSWFGKD-----QIQQVIDKLINDPDSARAV 308

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           +S W+ A+ D+   PPC       + + +LS     RS D+F   P N      L   + 
Sbjct: 309 MSLWD-AVKDEHDSPPCLNHIWVRIVDDQLSLTATFRSNDMFSAWPANGMGLRALQKYIY 367

Query: 190 SVI--------GFQYGEFIHTLGDVHLYNNHFEQAD 217
             I          Q G  I      H+Y+  +E A+
Sbjct: 368 DGIVRGSDIHQNLQLGPLITVSQSAHIYDECWEHAE 403


>gi|66391837|ref|YP_238762.1| gp42 dCMP hydroxymethylase [Aeromonas phage 31]
 gi|62114674|gb|AAX63522.1| gp42 dCMP hydroxymethylase [Aeromonas phage 31]
          Length = 231

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 22/213 (10%)

Query: 13  KFGSDR--RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70
           +F +D    D+TGV T        + D    F  L    +       EL W+L     V 
Sbjct: 16  RFNNDEFVTDKTGVKTVEIAPVMFKADEPLIFGKLNNDYIE-----RELAWYLSQSRYVH 70

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
            +     +IW+  AD DG +   YG  W    D +G+   Q ++++  L +DP +RR  +
Sbjct: 71  DIPGKTPAIWEAVADSDGRINSNYG--WAILSDENGS---QFANVLMHLASDPNTRRANM 125

Query: 131 SAWNVALIDK-----MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-----S 180
                 + +      M+   C    Q+ + +GKL+  ++ RS D   G   + A      
Sbjct: 126 IYTRPTMHEDYKAHGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDWAWQDYVL 185

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
             L+  + +  I  + G+    +  +H+Y  HF
Sbjct: 186 KRLVDKLQSREIMVEKGDIYWCVDSLHVYERHF 218


>gi|300087783|ref|YP_003758305.1| thymidylate synthase [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527516|gb|ADJ25984.1| thymidylate synthase, putative [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 215

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           QI+ +++  R + ++               +A PPC       V  GKL   +Y RS D+
Sbjct: 103 QIAEVIRMYREEGFNTNQAFMTVGNPEAISLADPPCLRSVDTRVRYGKLHFVVYFRSWDL 162

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           + G P N+A+  LL   +A  IG + G+ I     +HLY+  +E A
Sbjct: 163 WAGFPSNLAALQLLKEYMAGEIGVEDGQIIAISKGLHLYDYSWEIA 208


>gi|108863579|gb|ABG22164.1| DHFR-TS [Haemoproteus pallidus]
 gi|108863581|gb|ABG22165.1| DHFR-TS [Haemoproteus pallidus]
          Length = 73

 Score = 48.1 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         DY    +DQ+ ++++ ++ DP +RR I+ AWN   ++K
Sbjct: 14  DLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIIICAWNPKDLEK 73


>gi|49247548|gb|AAT58676.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. WW1]
          Length = 78

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         DY    +DQ+ ++++ ++ DP +RR I+ AWN   ++K
Sbjct: 19  DLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIILCAWNPKDLEK 78


>gi|67922327|ref|ZP_00515839.1| Thymidylate synthase [Crocosphaera watsonii WH 8501]
 gi|67855778|gb|EAM51025.1| Thymidylate synthase [Crocosphaera watsonii WH 8501]
          Length = 502

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 12/157 (7%)

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           I D+   K+G +   YG + RSW + D     QI   +  L +D  S R ++S W+V   
Sbjct: 263 ILDDAPQKEG-VKYTYGQRLRSWFERD-----QIKQAIDKLISDKDSSRVVMSLWDVKDY 316

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI------ 192
           +    PPC       + + +LS     RS D+F   P N      L   +   +      
Sbjct: 317 ENNDSPPCLNHIWVRIVDDELSLTATFRSNDMFSAWPANAMGLRELQQHIIEEVNNKYQH 376

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
            FQ G  I      H+Y++ +E AD  +    R + Q
Sbjct: 377 NFQLGPLIIISQSAHIYSDCWEHADKVIETEYRRICQ 413


>gi|49247546|gb|AAT58675.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT3]
 gi|108863577|gb|ABG22163.1| DHFR-TS [Haemoproteus minutus]
          Length = 73

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 8/60 (13%)

Query: 89  ELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +LGPIYG QWR +         DY    +DQ+ ++++ ++ DP +RR I+ AWN   ++K
Sbjct: 14  DLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIILCAWNPKDLEK 73


>gi|149408287|ref|YP_001294566.1| hypothetical protein ORF058 [Pseudomonas phage M6]
          Length = 351

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 12/159 (7%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E LW L G ++V Y+ R  V     ++D        YG +WR          DQ+  I+ 
Sbjct: 68  ESLWMLGGRNDVEYVARF-VDRMRSYSDDGLTFHGAYGFRWRQ-----HFFEDQLPKIIA 121

Query: 118 SLRADPYSRRHIVSAWNV-ALIDKMALP-PCH--CLFQFYVDNGKLSCQLYQRSGDVFLG 173
           +L+ +   RR ++S W+  A + +     PC+   +FQ   D G+L   +  RS D+  G
Sbjct: 122 ALKENRDDRRQVLSMWDADADLGRQGKDLPCNLQAIFQIACD-GRLDMTVTNRSNDLIWG 180

Query: 174 I-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
               N   +S L   +A  +G + G +     + H Y  
Sbjct: 181 AYGANAVHFSYLHEYVARSVGVEQGIYRQVSANFHAYEE 219


>gi|303243613|ref|ZP_07329955.1| thymidylate synthase, methanogen type [Methanothermococcus
           okinawensis IH1]
 gi|302486174|gb|EFL49096.1| thymidylate synthase, methanogen type [Methanothermococcus
           okinawensis IH1]
          Length = 223

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 5/110 (4%)

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP-----PCHCLFQFYVDNGKL 159
           + N I+QI  I+  L+  P SRR +   W   +  +++       PC    QF + + KL
Sbjct: 94  NNNEINQIEYIIDKLKEQPNSRRCVAITWQPDIDIEVSKKDYGSVPCLQFVQFLIRDNKL 153

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
              +  RS D+ +    N      L   +A  +G  YG + H    +H+Y
Sbjct: 154 HQTVLFRSNDLMVAFVSNALGLIALGEKVAEEVGVDYGTYTHHSVSMHIY 203


>gi|308273673|emb|CBX30275.1| hypothetical protein N47_D30840 [uncultured Desulfobacterium sp.]
          Length = 220

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 50/113 (44%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           QI  ++Q  + D +                +  PPC       +  GKL   +Y RS D+
Sbjct: 106 QIKEVIQMYKNDGHGTNQAYMTVGDPSTIYLGDPPCLRGIDTRIRYGKLHFMVYFRSWDL 165

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           + G P N+ +  LL   ++  IG Q GE I     +HLY+  +E A L+  R+
Sbjct: 166 WNGFPANLGAIQLLKEYMSLEIGVQDGEIIAASKGLHLYDYIWELAKLRTLRT 218


>gi|73748623|ref|YP_307862.1| thymidylate synthase [Dehalococcoides sp. CBDB1]
 gi|147669382|ref|YP_001214200.1| thymidylate synthase-like protein [Dehalococcoides sp. BAV1]
 gi|289432648|ref|YP_003462521.1| thymidylate synthase [Dehalococcoides sp. GT]
 gi|73660339|emb|CAI82946.1| thymidylate synthase [Dehalococcoides sp. CBDB1]
 gi|146270330|gb|ABQ17322.1| Thymidylate synthase-like protein [Dehalococcoides sp. BAV1]
 gi|288946368|gb|ADC74065.1| thymidylate synthase, putative [Dehalococcoides sp. GT]
          Length = 217

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 111 QISSIVQSLRADPY-SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           QI+ +++  R   + + +  ++  N   +D +  PPC       V  GKL   +Y RS D
Sbjct: 103 QIAKVIKMYRETGFNTNQAFMTVGNPETLD-LEDPPCLRSIDTRVRYGKLHFIIYFRSWD 161

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           ++ G P N+A+  LL   +A+ IG + GE I     +H+Y+
Sbjct: 162 LWAGFPSNLAAIQLLKEYMAAEIGVEDGEIIAMSKGMHIYD 202


>gi|109290020|ref|YP_656269.1| gp42 dCMP hydroxymethylase [Aeromonas phage 25]
 gi|104345693|gb|ABF72593.1| gp42 dCMP hydroxymethylase [Aeromonas phage 25]
          Length = 224

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 22/215 (10%)

Query: 11  VIKFGSDR--RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN 68
           V K+ S+    D++GV T        + D       L   K++   +  EL W+L     
Sbjct: 11  VSKYKSNEFVTDKSGVKTVEIAPVMFKADED-----LIFGKLNHDYIERELSWYLSQSRY 65

Query: 69  VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128
           V+ +     +IW+  AD +G +   YG  W  + + +GN   Q +++V+ L  +PY+RR 
Sbjct: 66  VADIPGKTPAIWEAVADCNGMINSNYG--WAIFSEENGN---QFANVVKHLIENPYTRRA 120

Query: 129 IVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS- 182
            +     ++      + M+   C    Q+ + +GKL+  ++ RS D   G   + A    
Sbjct: 121 NMIYTRPSMHTDYNANGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDWAWQDY 180

Query: 183 ----LLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
               L+  + +  I  + G+       +H+Y  HF
Sbjct: 181 VLSRLVDTLQSHEIMVEKGDIYWCADSLHVYKRHF 215


>gi|310722439|ref|YP_003969263.1| dCMP hydroxymethylase [Aeromonas phage phiAS4]
 gi|306021282|gb|ADM79817.1| dCMP hydroxymethylase [Aeromonas phage phiAS4]
          Length = 227

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 22/215 (10%)

Query: 11  VIKFGSDR--RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN 68
           V K+ S+    D++GV T        + D       L   K++   +  EL W+L     
Sbjct: 14  VSKYKSNEFVTDKSGVKTVEIAPVMFKADED-----LIFGKLNHDYIERELSWYLSQSRY 68

Query: 69  VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128
           V+ +     +IW+  AD +G +   YG  W  + + +GN   Q +++V+ L  +PY+RR 
Sbjct: 69  VADIPGKTPAIWEAVADCNGMINSNYG--WAIFSEENGN---QFANVVKHLIENPYTRRA 123

Query: 129 IVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS- 182
            +     ++      + M+   C    Q+ + +GKL+  ++ RS D   G   + A    
Sbjct: 124 NMIYTRPSMHTDYNANGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDWAWQDY 183

Query: 183 ----LLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
               L+  + +  I  + G+       +H+Y  HF
Sbjct: 184 VLSRLVDTLQSHEIMVEKGDIYWCADSLHVYERHF 218


>gi|304314929|ref|YP_003850076.1| thymidylate synthase [Methanothermobacter marburgensis str.
           Marburg]
 gi|1717846|sp|P80305|TYSY_METTM RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|2127679|pir||S62192 probable thymidylate synthase (EC 2.1.1.45) - Methanobacterium
           thermoautotrophicum (strain Marburg)
 gi|1103708|emb|CAA63063.1| deoxyuridylate hydroxymethylase (TysY) [Methanothermobacter
           thermautotrophicus]
 gi|302588388|gb|ADL58763.1| thymidylate synthase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 223

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 2/109 (1%)

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +DQ+   ++ L+    SRR  +  W+  +  +    PC  L  F V  G+L      RS 
Sbjct: 109 VDQVDRAIERLKNCKESRRATMVTWDPKIDTESDEVPCMILVDFKVREGRLFTTALWRSH 168

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEF-IHTLGDVHLYNNHFEQA 216
           D++     N    + L   +AS +G + G   IH++   H+Y  +F++A
Sbjct: 169 DIYGAWFPNAVGLAYLADHVASEVGVEVGHITIHSIS-AHIYEVNFKEA 216


>gi|218781981|ref|YP_002433299.1| thymidylate synthase-like protein [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763365|gb|ACL05831.1| thymidylate synthase-like protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 263

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 39/201 (19%)

Query: 25  GTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWA 84
           G   T+G ++      G P+   K   W++   E++ F   D  V Y             
Sbjct: 100 GESYTYGERL-----TGAPITGDKLDWWQAQNKEIIDFREPDGKVVY------------- 141

Query: 85  DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL- 143
           +KDG+L                  ++QI  I+Q+ +   +  R+      VA    + L 
Sbjct: 142 EKDGQL-----------------YLNQIEWIIQTYKN--FGHRNNQMVLQVAHPSDLTLL 182

Query: 144 -PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
            PPC       + +G L   +Y RS D++ G+P N+A    L   +A+ IG + GE +  
Sbjct: 183 DPPCLRSIDTRIQDGTLHFFVYFRSWDLWGGLPANLAGIQNLKEYMANEIGVKDGEMVVE 242

Query: 203 LGDVHLYNNHFEQADLQLSRS 223
              +HLY    + A L+  R 
Sbjct: 243 SKGLHLYGYAEDLAKLRCLRD 263


>gi|168804053|ref|YP_001686984.1| thymidylate synthase [Glossina pallidipes salivary gland
          hypertrophy virus]
 gi|146164240|gb|ABQ08809.1| thymidylate synthase [Glossina pallidipes salivary gland
          hypertrophy virus]
          Length = 115

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 6/68 (8%)

Query: 2  HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60
          ++Y  L+ ++I+ G     +  V     FG Q+ +DL +K FPL  +K+  W  V+ ELL
Sbjct: 21 NKYPTLVNNIIEHGISTEKKISV-----FGAQLEYDLRNKKFPLFISKRYDWAYVIEELL 75

Query: 61 WFLRGDSN 68
          W +RG+++
Sbjct: 76 WCIRGETD 83


>gi|284929672|ref|YP_003422194.1| thymidylate synthase [cyanobacterium UCYN-A]
 gi|284810116|gb|ADB95813.1| thymidylate synthase [cyanobacterium UCYN-A]
          Length = 504

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           I D+ + ++G +   YG + RSW   D     QI  ++  L +D  S R ++S W+V   
Sbjct: 263 ILDDSSQREG-IKYTYGQRLRSWFKKD-----QIQQVIDLLVSDINSSRAVMSLWDVNDY 316

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI------ 192
           D    PPC         + +LS     RS D+F   P N      L + +   I      
Sbjct: 317 DNNDSPPCLNHIWIRTIDDELSLTATFRSNDMFSAWPSNAMGLRALQIHIMREIQNRINQ 376

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQAD 217
             + G  +      H+YN+ +E AD
Sbjct: 377 KLKIGPLVTVSQSAHIYNDCWEYAD 401


>gi|240276636|gb|EER40147.1| thymidylate synthase [Ajellomyces capsulatus H143]
          Length = 65

 Score = 46.2 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 7/67 (10%)

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN-----IVDLLSFRYEDFTLRSYEPHAA 257
           +GD H+Y +H E    QL+R P   P++II  +     I+D   ++ E+F +  Y+PH  
Sbjct: 1   MGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMD--GWKEEEFEVVGYKPHKG 58

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 59  IKMKMSV 65


>gi|57234449|ref|YP_181546.1| thymidylate synthase, putative [Dehalococcoides ethenogenes 195]
 gi|57224897|gb|AAW39954.1| thymidylate synthase, putative [Dehalococcoides ethenogenes 195]
          Length = 217

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 111 QISSIVQSLRADPY-SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           QI+ +++  R   + + +  ++  N   +D +  PPC       +  GKL   +Y RS D
Sbjct: 103 QIAKVIKMYRDTGFNTNQAFMTVGNPETLD-LEDPPCLRSIDTRIRYGKLHFVIYFRSWD 161

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           ++ G P N+A+  +L   +A+ IG + GE I     +H+Y+
Sbjct: 162 LWAGFPSNLAAIQMLKEYMAAEIGVEDGEIIAMSKGMHIYD 202


>gi|261403513|ref|YP_003247737.1| thymidylate synthase, methanogen type [Methanocaldococcus vulcanius
           M7]
 gi|261370506|gb|ACX73255.1| thymidylate synthase, methanogen type [Methanocaldococcus vulcanius
           M7]
          Length = 221

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 94  YGVQWRSWPDYDGNVI-DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC--HCLF 150
           Y  + R +P YD  V  DQI  +++ L ++  SRR +VS WN  +   +   PC  H  F
Sbjct: 85  YFERIREYPSYDRKVKNDQIKYVIEKLNSNSTSRRAVVSLWNPFIDQDVKDVPCLQHIGF 144

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           Q    N  +S     RS D+ L    N      L   +A         + H + + H+Y
Sbjct: 145 QKREKNLHMSVLF--RSNDILLAFHSNALGLIKLGEYVAEKTNSTLKTYTHFIYNAHIY 201


>gi|270308125|ref|YP_003330183.1| thymidylate synthase [Dehalococcoides sp. VS]
 gi|270154017|gb|ACZ61855.1| thymidylate synthase [Dehalococcoides sp. VS]
          Length = 217

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 111 QISSIVQSLRADPY-SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           QI+ +++  +   + + +  ++  N   +D +  PPC       V  GKL   +Y RS D
Sbjct: 103 QIAKVIKMYKETGFNTNQAFMTVGNPETLD-LEDPPCLRSIDTRVRYGKLHFIIYFRSWD 161

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           ++ G P N+A+  +L   +A+ IG + GE I     +H+Y+
Sbjct: 162 LWAGFPSNLAAIQMLKEYMAAEIGVEDGEIIAMSKGMHIYD 202


>gi|294495255|ref|YP_003541748.1| thymidylate synthase [Methanohalophilus mahii DSM 5219]
 gi|292666254|gb|ADE36103.1| thymidylate synthase, methanogen type [Methanohalophilus mahii DSM
           5219]
          Length = 217

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 4/124 (3%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + R+W +     +DQIS ++  L+    +RR     W   +  ++   PC  L  F 
Sbjct: 91  YGQRLRNWDER----VDQISYVIDKLKNSKTTRRATAVTWIPYIDTEVDEVPCMILDDFK 146

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V N ++      RS D     P N+   S L   +A   G+  G         H+Y + +
Sbjct: 147 VRNNQVHMTTLFRSHDFAGAYPANLYGLSQLLKYVAQNAGYDTGTITTISVSAHIYEHDW 206

Query: 214 EQAD 217
           ++ +
Sbjct: 207 DRIE 210


>gi|91773067|ref|YP_565759.1| thymidylate synthase [Methanococcoides burtonii DSM 6242]
 gi|121686818|sp|Q12X17|TYSY_METBU RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|91712082|gb|ABE52009.1| Thymidylate synthase [Methanococcoides burtonii DSM 6242]
          Length = 217

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 4/122 (3%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + R+W   DG V DQI  +++ L  +  +RR     W   +  K+   PC  +  F 
Sbjct: 91  YGQRLRNW---DGKV-DQIEYVIEKLTNNKTTRRATAVTWVPTIDTKVDEVPCMIIDDFK 146

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           + +  +      RS D     P N+   S L   +A  +G   G         H+Y++ +
Sbjct: 147 IRDDTVHLTTLFRSHDFAGAYPANLYGLSKLLEYVADKVGLAPGTITTMSVSAHIYDHDW 206

Query: 214 EQ 215
           ++
Sbjct: 207 DK 208


>gi|311993033|ref|YP_004009899.1| gp42 dCMP hydroxymethylase [Enterobacteria phage CC31]
 gi|284177871|gb|ADB81537.1| gp42 dCMP hydroxymethylase [Enterobacteria phage CC31]
          Length = 245

 Score = 44.7 bits (104), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 16/179 (8%)

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI 109
           V+ + V  EL W+      V  +     +IW++ +   GE+   YG     W  +     
Sbjct: 52  VNQEYVERELAWYKSKSLFVKDIPGGTPAIWEQVSSSKGEINSNYG-----WAIWSAENY 106

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSCQLY 164
           +Q S     L   P SRR I+     ++      D M+   C    Q+ + +G+++  + 
Sbjct: 107 NQFSFCATELIEKPDSRRAIMIYTRPSMQVDFERDGMSDFMCTNTVQYLIRDGRVNAIVN 166

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVI----GFQY--GEFIHTLGDVHLYNNHFEQAD 217
            RS DV  G   + A    +   L   +    G +Y  G+ I   G +H+Y  HF   D
Sbjct: 167 MRSNDVVFGFRNDYAWQKYVLESLVETVNAGSGEKYVPGDIIWNAGSLHVYERHFYLVD 225


>gi|169835571|ref|ZP_02868759.1| thymidylate synthase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 61

 Score = 44.7 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
           T+ D H+Y NH E    QL+R P  L ++ I     + L+F  ED TL  YE + AI  +
Sbjct: 1   TIIDAHIYENHIEGLKEQLTRKPLKLAKIKIADKPFNELTF--EDITLEDYESYPAIKFE 58

Query: 262 VSV 264
           V+V
Sbjct: 59  VAV 61


>gi|118789|sp|P18030|DCHM_BPT6 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase;
           Short=Deoxycytidylate hydroxymethylase; AltName:
           Full=dCMP hydroxymethylase; Short=dCMP HMase
          Length = 246

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  + +       EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG  W  W +   +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +   L S +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDPTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|254490282|ref|ZP_05103471.1| hypothetical protein MDMS009_614 [Methylophaga thiooxidans DMS010]
 gi|224464415|gb|EEF80675.1| hypothetical protein MDMS009_614 [Methylophaga thiooxydans DMS010]
          Length = 82

 Score = 44.3 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSFR--- 243
           +A + G + G+  H + + H+Y +  E   D+QL R P   P++ INP I  L       
Sbjct: 1   MAQISGLKPGKAYHKIANAHIYEDQLELMRDVQLKREPFASPKLHINPEIKSLSDLETWV 60

Query: 244 -YEDFTLRSYEPHAAILAKVSV 264
              DF +  Y+ H  I    SV
Sbjct: 61  TLADFEVEGYQSHEPIAYPFSV 82


>gi|150401473|ref|YP_001325239.1| thymidylate synthase [Methanococcus aeolicus Nankai-3]
 gi|150014176|gb|ABR56627.1| thymidylate synthase [Methanococcus aeolicus Nankai-3]
          Length = 222

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 109 IDQISSIVQSLRADPYSRRHIVSAW----NVALIDK-MALPPCHCLFQFYVDNGKLSCQL 163
           I+QI  IV+ L+    SRR +   W    ++ + +K     PC    QF + + KL   +
Sbjct: 97  INQIDFIVEKLKEQQNSRRCVAITWQPNIDIEVSNKDHGSVPCLQFVQFLIRDNKLYQTV 156

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
             RS D+ +    N      L  M+A  +G  YG + H    +H+Y
Sbjct: 157 LFRSNDLAVAFVSNALGLIALGEMVAEKVGVDYGTYTHHSVSMHIY 202


>gi|9632636|ref|NP_049659.1| gp42 dCMP hydroxymethylase [Enterobacteria phage T4]
 gi|118788|sp|P08773|DCHM_BPT4 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase;
           Short=Deoxycytidylate hydroxymethylase; AltName:
           Full=dCMP hydroxymethylase; Short=dCMP HMase
 gi|4389322|pdb|1B5D|A Chain A, Dcmp Hydroxymethylase From T4 (Intact)
 gi|4389324|pdb|1B5E|A Chain A, Dcmp Hydroxymethylase From T4
 gi|4389360|pdb|1B49|A Chain A, Dcmp Hydroxymethylase From T4 (Phosphate-Bound)
 gi|4389361|pdb|1B49|C Chain C, Dcmp Hydroxymethylase From T4 (Phosphate-Bound)
 gi|6729700|pdb|1B5D|B Chain B, Dcmp Hydroxymethylase From T4 (Intact)
 gi|6729701|pdb|1B5E|B Chain B, Dcmp Hydroxymethylase From T4
 gi|5354260|gb|AAD42467.1|AF158101_54 gp42 dCMP hydroxymethylase [Enterobacteria phage T4]
 gi|15312|emb|CAA68342.1| unnamed protein product [Enterobacteria phage T4]
 gi|215843|gb|AAA21709.1| deoxycytidylate hydroxymethylase [Enterobacteria phage T4]
 gi|299780399|gb|ADJ39761.1| dCMP hydroxymethylase [Enterobacteria phage T4T]
          Length = 246

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  + +       EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG  W  W +   +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +   L S +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|32453532|ref|NP_861738.1| RB69ORF048c hypothetical protein [Enterobacteria phage RB69]
 gi|32350351|gb|AAP75950.1| RB69ORF048c hypothetical protein [Enterobacteria phage RB69]
          Length = 238

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 5/116 (4%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRR---HIVSAWNVALID--KMALPPCHCLFQFYVDNGK 158
           Y   +  Q+ ++++ L+  P SRR    I+ + + AL+D  +    PC     +Y+ +GK
Sbjct: 116 YGPRIAAQLPALLKELKEKPNSRRVVFQILESSDQALLDSDETLEYPCTDSVTYYIRDGK 175

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
           L    + RS +  + +  +      L   +A+  G + G++ HT+   H++   F+
Sbjct: 176 LYTHCHMRSQNCAVVMQLDFYLQGKLLHYIANECGVEVGDYTHTMVSAHVFERDFD 231


>gi|118787|sp|P18029|DCHM_BPT2 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase;
           Short=Deoxycytidylate hydroxymethylase; AltName:
           Full=dCMP hydroxymethylase
          Length = 246

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  + +       EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG  W  W +   +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +   L S +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|330858570|ref|YP_004414945.1| putative dCMP hydroxymethylase [Shigella phage Shfl2]
 gi|327397504|gb|AEA73006.1| putative dCMP hydroxymethylase [Shigella phage Shfl2]
          Length = 246

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 22/206 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  + +       EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSQSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG  W  W +   +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +   L S +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 194 ------FQYGEFIHTLGDVHLYNNHF 213
                 ++ G  I  +G +H+Y+ HF
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHF 222


>gi|291290258|dbj|BAI83053.1| dCMP hydroxymethylase [Enterobacteria phage AR1]
          Length = 246

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  + +       EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG  W  W +   +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +   L S +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|228860976|ref|YP_002853999.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB51]
 gi|227438650|gb|ACP30962.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB51]
          Length = 246

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  + +       EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG  W  W +   +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +   L S +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSSRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|116326264|ref|YP_802984.1| dCMP hydroxymethylase [Enterobacteria phage RB32]
 gi|115343857|gb|ABI94866.1| dCMP hydroxymethylase [Enterobacteria phage RB32]
          Length = 246

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  + +       EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSQSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG  W  W +   +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +   L S +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|6686334|sp|O26868|TYSY_METTH RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
          Length = 222

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 2/110 (1%)

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +DQ+   ++ L+    SRR  +  W+          PC  L  F + +G+L      RS 
Sbjct: 109 VDQLDEAIRRLKNCTESRRATMVTWDPPEDTASDEVPCMILVDFKIRDGRLFTTALWRSH 168

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEF-IHTLGDVHLYNNHFEQAD 217
           D++     N    + L   +A+ +G + G   IH++   H+Y  +F++A+
Sbjct: 169 DIYGAWFPNAVGLAYLADHVAAEVGVEVGHITIHSIS-AHIYEVNFKEAE 217


>gi|228861357|ref|YP_002854378.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB14]
 gi|227438373|gb|ACP30686.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB14]
          Length = 246

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  + +       EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDEYIQ-----RELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG  W  W +   +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG--WAIWSE---DNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +   L S +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 194 ------FQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|15678799|ref|NP_275916.1| thymidylate synthase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|2621865|gb|AAB85277.1| thymidylate synthase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 227

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 2/110 (1%)

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +DQ+   ++ L+    SRR  +  W+          PC  L  F + +G+L      RS 
Sbjct: 114 VDQLDEAIRRLKNCTESRRATMVTWDPPEDTASDEVPCMILVDFKIRDGRLFTTALWRSH 173

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEF-IHTLGDVHLYNNHFEQAD 217
           D++     N    + L   +A+ +G + G   IH++   H+Y  +F++A+
Sbjct: 174 DIYGAWFPNAVGLAYLADHVAAEVGVEVGHITIHSIS-AHIYEVNFKEAE 222


>gi|218437721|ref|YP_002376050.1| thymidylate synthase [Cyanothece sp. PCC 7424]
 gi|218170449|gb|ACK69182.1| thymidylate synthase [Cyanothece sp. PCC 7424]
          Length = 512

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 11/130 (8%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + RSW   D     QI  +++ L  D  S R ++S W+V   +    PPC       
Sbjct: 277 YGKRLRSWFKQD-----QIEQVIKKLTLDINSSRAVMSLWDVHDHEGNDNPPCLNHIWLR 331

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG------FQYGEFIHTLGDVH 207
           V   +LS     RS D+F   P N      L   +   I        + G  I      H
Sbjct: 332 VVENELSLTATFRSNDMFSAWPANAMGLRALQQHILDNINQRASYSLKMGPLITVSQSAH 391

Query: 208 LYNNHFEQAD 217
           +Y++ +E AD
Sbjct: 392 IYSDCWEYAD 401


>gi|297619495|ref|YP_003707600.1| thymidylate synthase, methanogen type [Methanococcus voltae A3]
 gi|297378472|gb|ADI36627.1| thymidylate synthase, methanogen type [Methanococcus voltae A3]
          Length = 213

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 7/179 (3%)

Query: 38  LSKGFPLLTTKKVHWKSVVHELLWFL---RGDSNVSY-LHRHGVSIWDEWADKDGELGPI 93
           LS+G  + T      K +++ ++       GD +  Y L  + +  +            +
Sbjct: 21  LSEGIDMTTEDGQKCKEIMNTVIEITDPSNGDVSSKYPLGENAIKSYTNQLVNGCNTEFV 80

Query: 94  YGVQWR--SWPDYDGN-VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150
           Y    R   +P+ D     DQI  IV  L  +  SRR I   WN  +  ++   PC    
Sbjct: 81  YDYHERIFEYPNQDKTEKFDQIDYIVGKLSENHSSRRAIAITWNPYIDTQVKDVPCLQFI 140

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           +F V N +L   +  RS D +L    N      L   +A  +     ++ H    +H+Y
Sbjct: 141 EFLVRNDELYMTVLFRSNDAYLAFHANALGLIALGQTVAEKLNIPLKKYTHHSVSMHVY 199


>gi|291457829|ref|ZP_06597219.1| thymidylate synthase [Bifidobacterium breve DSM 20213]
 gi|291380554|gb|EFE88072.1| thymidylate synthase [Bifidobacterium breve DSM 20213]
          Length = 41

 Score = 43.5 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 24/33 (72%)

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCH 147
           ++  ++ +P  RR I+SAWN + + KMALPPCH
Sbjct: 3   VIDKIKNNPDDRRIILSAWNPSDLKKMALPPCH 35


>gi|289191763|ref|YP_003457704.1| thymidylate synthase, methanogen type [Methanocaldococcus sp.
           FS406-22]
 gi|288938213|gb|ADC68968.1| thymidylate synthase, methanogen type [Methanocaldococcus sp.
           FS406-22]
          Length = 222

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 5/111 (4%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGK 158
           Y    I+QI+ I++ L     SRR +   WN  +      D+    PC  L QF + +  
Sbjct: 92  YANEKINQINYIIEKLNQQKNSRRAVAITWNPKIDIDISRDERGSVPCLQLLQFLIRDDN 151

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           L   +  RS D  +    N      L  ++A     +  E++H    +H+Y
Sbjct: 152 LYMTVVFRSNDALIAFVANALGLISLGELVAEKTNTKLKEYVHHSISMHVY 202


>gi|325959916|ref|YP_004291382.1| thymidylate synthase [Methanobacterium sp. AL-21]
 gi|325331348|gb|ADZ10410.1| thymidylate synthase, methanogen type [Methanobacterium sp. AL-21]
          Length = 205

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 2/109 (1%)

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           IDQI   V  L     SRR I   W+  +  +    PC  L  F + +G+L      RS 
Sbjct: 95  IDQIQEAVMRLNNFKESRRAISITWDPLVDTQNDEVPCMMLVDFKIRDGELHTTGLWRSH 154

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEF-IHTLGDVHLYNNHFEQA 216
           D++     N    S L   +A   G + G   IH++   H+Y  +F++A
Sbjct: 155 DIYGAWFPNAVGLSNLAKYVAEETGSKLGTLTIHSI-SAHIYEVNFKEA 202


>gi|193211965|ref|YP_001997918.1| thymidylate synthase [Chlorobaculum parvum NCIB 8327]
 gi|193085442|gb|ACF10718.1| thymidylate synthase [Chlorobaculum parvum NCIB 8327]
          Length = 343

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 34/211 (16%)

Query: 44  LLTTKKVHWKSVV--HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGE-LGPIYGVQWRS 100
           L+T  +  W  ++   E LW   G +++ ++  H +     ++D DGE L   YG + R 
Sbjct: 52  LVTVPERRWNPILPFAESLWLATGKNDLEFIG-HYLKNMKNFSD-DGEFLRGGYGPRLRK 109

Query: 101 W----PDY-------------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVA--LIDKM 141
           +     DY             + + +DQ   I +S   D ++R+ I++  +      DK 
Sbjct: 110 YNGINDDYKIRNTYDIDIAKLNKSEVDQFGFICKSFEKDKFTRQAIINIGDPPKDCFDKK 169

Query: 142 ALP------PCHCL--FQFYVDNGKLSCQLYQRSGDVFLGI-PFNIASYSLLTMMLASVI 192
                    PC  L  FQ      KL+  +Y RS D   G    NI +++ +    + ++
Sbjct: 170 GNLKITKDFPCTRLLHFQKQPKANKLNLTVYMRSNDFVWGASAVNIFNFTFMLEYFSQIL 229

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
             + GE+ H   + H Y   FE     +SR+
Sbjct: 230 DLEIGEYYHIANNFHYY-EEFEDLVQSISRT 259


>gi|66392082|ref|YP_239304.1| putative thymidylate synthase [Xanthomonas phage Xp15]
 gi|62529192|gb|AAX84875.1| putative thymidylate synthase [Xanthomonas phage Xp15]
          Length = 273

 Score = 42.4 bits (98), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 22/170 (12%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E+ W L        + +H   +W+   + DG     YG  W       G  +  +  +++
Sbjct: 64  EMRWKLGASKFDDSIKQHA-KMWESVQNPDGTFNSNYGQFWF------GQQMGVMKVVME 116

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPP-----CHCLFQFYVDNGKLSCQLYQRSGDVFL 172
            +R D  SRR I+      L D    P      C     F++ +  L   ++ RS D   
Sbjct: 117 LIR-DQDSRRAIIPM----LTDDHLSPETVDTVCTEAVSFHIRHNTLYTSVHMRSSDQIF 171

Query: 173 GIPFNIASYSLLT-----MMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           G+  +I ++S+LT     ++ A+    Q G    T    H+Y  H+   D
Sbjct: 172 GLGTDIPTFSVLTHLVHGLLQANYPSLQVGSMTITAASSHIYERHYRMVD 221


>gi|307150936|ref|YP_003886320.1| thymidylate synthase [Cyanothece sp. PCC 7822]
 gi|306981164|gb|ADN13045.1| thymidylate synthase [Cyanothece sp. PCC 7822]
          Length = 505

 Score = 42.4 bits (98), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 11/130 (8%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + RSW   D     QI   ++ L A+  S R ++S W+V   +    PPC       
Sbjct: 277 YGQRLRSWFGRD-----QIEQAIEKLAAEKDSSRVVMSLWDVEDYENNDSPPCLNHIWLR 331

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM-MLASVI-----GFQYGEFIHTLGDVH 207
           + + +LS     RS D+F   P N      L   +L ++I       + G  I      H
Sbjct: 332 IVDNELSLTATFRSNDMFSAWPANAMGLRALQQHILDNIIQKSDDSLKMGSLIIVSQSAH 391

Query: 208 LYNNHFEQAD 217
           +Y++ +E A+
Sbjct: 392 IYSDCWEYAE 401


>gi|119719856|ref|YP_920351.1| thymidylate synthase-like [Thermofilum pendens Hrk 5]
 gi|119524976|gb|ABL78348.1| Thymidylate synthase-like protein [Thermofilum pendens Hrk 5]
          Length = 460

 Score = 42.4 bits (98), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 87  DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           +GE G +Y    R     +    DQ+  IV+ L + P +RR I   W+ A       PPC
Sbjct: 233 EGEEGAVYSYGDRLRRHREAG--DQVRRIVERLASSPDTRRAIALTWDFATDTNSQDPPC 290

Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
               Q  +     +   + RS D +   P N  +Y LL +M
Sbjct: 291 LVAVQGDLSGDTYNQVAFFRSHDAYAAWPLN--AYGLLALM 329


>gi|899339|emb|CAA32651.1| thymidylate synthase (exons 5-7) [Mus musculus]
          Length = 30

 Score = 42.0 bits (97), Expect = 0.089,   Method: Composition-based stats.
 Identities = 17/30 (56%), Positives = 21/30 (70%)

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 1   GLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 30


>gi|257059146|ref|YP_003137034.1| thymidylate synthase [Cyanothece sp. PCC 8802]
 gi|256589312|gb|ACV00199.1| thymidylate synthase [Cyanothece sp. PCC 8802]
          Length = 508

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + RSW   D     QI   +Q L  +  S R ++S W+V   D    PPC       
Sbjct: 277 YGQRLRSWFGRD-----QIEQAIQKLVIEKDSSRVVMSLWDVRDYDNNDSPPCLNHIWLR 331

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI------GFQYGEFIHTLGDVH 207
           + N +LS     RS D+F     N      L   +   I        + G  I      H
Sbjct: 332 IVNDELSLTATFRSNDMFSAWVANAMGLRALQQHILDNIVSKADYNLKMGPLITVSQSAH 391

Query: 208 LYNNHFEQAD 217
           +Y++ +E AD
Sbjct: 392 IYSDCWEHAD 401


>gi|282599167|ref|YP_003359084.1| deoxyuridylate hydroxymethyltransferase [Deftia phage phiW-14]
 gi|257219237|gb|ACV50252.1| deoxyuridylate hydroxymethyltransferase [Deftia phage phiW-14]
          Length = 357

 Score = 42.0 bits (97), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 22/196 (11%)

Query: 45  LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY 104
           L  +K +   +V E  W + G  N+       +    +++D         G+ W      
Sbjct: 57  LNGRKSNIFQMVAETFWVMSGSGNIKEFLEFFLPRAPQYSDD--------GINWHGAYGP 108

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP------------PCHCLFQF 152
                +Q+ S +  L  D  +RR  V   +  L    A+             PC+     
Sbjct: 109 RMYAHNQLQSAIDLLIKDKDTRRAYVMIADPTLDSAPAIEAAYGVGHSPKDVPCNREIHI 168

Query: 153 YVDNGKLSCQLYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
            +   KL  ++ QRSGD+  G    N   ++ L  +L+   G+  G++   + D H Y  
Sbjct: 169 NIIEDKLCMKVIQRSGDMLFGTGSINPFEFTFLQELLSEATGYALGDYQWDVTDAHYY-K 227

Query: 212 HFEQADLQLSRSPRTL 227
            FE     + RS +T 
Sbjct: 228 AFEDQVNDVLRSEQTF 243


>gi|218246096|ref|YP_002371467.1| thymidylate synthase [Cyanothece sp. PCC 8801]
 gi|218166574|gb|ACK65311.1| thymidylate synthase [Cyanothece sp. PCC 8801]
          Length = 497

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 13/158 (8%)

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
           S+L  +   I D+    +G +   YG + RSW   D     QI  ++  L  +  +   +
Sbjct: 255 SFLQEYIPQILDDAPYTEG-VKYTYGQRLRSWFKRD-----QIEQVINKLIGEIDAASGV 308

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           +S W+V   DK   P  + ++   VDN +LS     RS D+F   P N      L   + 
Sbjct: 309 MSLWDVNDHDKGGSPCLNHIWVRVVDN-ELSLTATLRSNDMFAAWPANAMGLRALQQHIR 367

Query: 190 SVIG------FQYGEFIHTLGDVHLYNNHFEQADLQLS 221
             I        Q G  I      H+Y++ +E  D  +S
Sbjct: 368 DAIAKRSDYNLQMGPLITISQSAHIYDDTWENVDKLIS 405


>gi|2160415|dbj|BAA00404.1| thymidylate synthase [Homo sapiens]
          Length = 68

 Score = 41.6 bits (96), Expect = 0.100,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 3  QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL 38
          QYL  ++H+++ G  + DRTG GT S FG Q R+ L
Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSL 67


>gi|256810378|ref|YP_003127747.1| thymidylate synthase, methanogen type [Methanocaldococcus fervens
           AG86]
 gi|256793578|gb|ACV24247.1| thymidylate synthase, methanogen type [Methanocaldococcus fervens
           AG86]
          Length = 222

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 5/111 (4%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGK 158
           Y+   I+QI  I++ L     SRR I   WN  +      D+    PC    +F V +  
Sbjct: 92  YNEERINQIDYIIEKLNQQKNSRRAIAITWNPKIDIEVSKDERGSVPCLQFIEFLVRDNN 151

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           L   +  RS D  L    N      L   +A     Q   ++H    +H+Y
Sbjct: 152 LHMTVVFRSNDALLAYVANALGLISLGEYIAEKTNTQLKSYVHHSVSMHVY 202


>gi|327314456|ref|YP_004329893.1| thymidylate synthase [Prevotella denticola F0289]
 gi|326946285|gb|AEA22170.1| thymidylate synthase [Prevotella denticola F0289]
          Length = 332

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/193 (20%), Positives = 86/193 (44%), Gaps = 26/193 (13%)

Query: 44  LLTTKKVHWKS--VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW 101
           ++T  +  W +     E LW   G ++++Y++ +G ++  +++D    +   YG + R +
Sbjct: 52  MITIAERQWYAPLAYAESLWIATGRNDMNYINLYGRNL-KKFSDNGETMRGAYGPRLRHY 110

Query: 102 P----DYD--------GNVIDQISSIVQSLRADPYSRRHIVSAWNVAL----IDK----M 141
                DY+         N +DQ   ++   + D  +R+ +++  +       ID+     
Sbjct: 111 NGDECDYNIHEIYDELPNEVDQFRYVIDCFKKDINTRQAVINIGDPVKDCFGIDRNLKVT 170

Query: 142 ALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGE 198
              PC  +  F  D    KL+  +  RS D+  G    NI +++ +    A+++G + G 
Sbjct: 171 KDIPCTRMLHFMKDANANKLNLIVSMRSNDLIWGASAVNIFNFTWMQEYFAAILGMEIGS 230

Query: 199 FIHTLGDVHLYNN 211
           + H   ++H Y +
Sbjct: 231 YYHIADNLHYYED 243


>gi|148927227|ref|ZP_01810800.1| Thymidylate synthase-like protein [candidate division TM7 genomosp.
           GTL1]
 gi|147887358|gb|EDK72809.1| Thymidylate synthase-like protein [candidate division TM7 genomosp.
           GTL1]
          Length = 208

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 42/99 (42%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           QI  ++  L          +S W+  +     + PC  +    + +GKL   ++  S DV
Sbjct: 96  QIEFLISKLDPQSPKGEAQISMWDKNIDQDQKVSPCTQIIWARIKHGKLELHVHAHSSDV 155

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           +  +  NI  +  L   +A  +G   G++ H L   HL+
Sbjct: 156 YKKLLMNILEFVSLQHYIAERVGVPVGKYYHFLDSGHLH 194


>gi|329847890|ref|ZP_08262918.1| thymidylate synthase protein [Asticcacaulis biprosthecum C19]
 gi|328842953|gb|EGF92522.1| thymidylate synthase protein [Asticcacaulis biprosthecum C19]
          Length = 166

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 30/47 (63%)

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
           RS D +LG+P +I  +++L  ++A  +  + G + H++G +HLY  +
Sbjct: 2   RSNDAYLGLPHDIFCFTMLQELIAGSLSAKLGTYKHSVGSLHLYTEN 48


>gi|77407171|ref|ZP_00784156.1| thymidylate synthase [Streptococcus agalactiae H36B]
 gi|77174220|gb|EAO77104.1| thymidylate synthase [Streptococcus agalactiae H36B]
          Length = 134

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 31  GYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSN--VSYLHRHGVSIWDEW-ADK 86
           G    +DLSKG FP+ T + +  KS + E+ W  +  +N  V    ++GV+ W++W    
Sbjct: 42  GAFAEYDLSKGEFPITTLRPIPIKSAIKEIFWIYQDQTNDLVVLNDKYGVTYWNDWEVGH 101

Query: 87  DGELGPIYGV 96
            G +G  YG 
Sbjct: 102 TGTIGQRYGA 111


>gi|254483604|ref|ZP_05096827.1| hypothetical protein GPB2148_2750 [marine gamma proteobacterium
           HTCC2148]
 gi|214036113|gb|EEB76797.1| hypothetical protein GPB2148_2750 [marine gamma proteobacterium
           HTCC2148]
          Length = 49

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 26/46 (56%)

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QLSR PR LP+M I      +  + +EDF L  Y PH  I A V+V
Sbjct: 4   QLSREPRALPRMNILRRPDSIYDYCFEDFELVDYNPHGHISAPVAV 49


>gi|167948528|ref|ZP_02535602.1| thymidylate synthase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 31

 Score = 39.3 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + DL +FRYEDF L  Y+PH  I A V+V
Sbjct: 1   PEVRDLFAFRYEDFELLDYDPHPHIKAPVAV 31


>gi|115739464|ref|XP_001198552.1| PREDICTED: similar to GA16493-PA, partial [Strongylocentrotus
           purpuratus]
 gi|115969033|ref|XP_001185436.1| PREDICTED: similar to GA16493-PA, partial [Strongylocentrotus
           purpuratus]
          Length = 45

 Score = 39.3 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 27/45 (60%)

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R PR  P++ I   + ++  F++EDF +  Y+P+  I  +++V
Sbjct: 1   LKRVPRQFPKLNIKRKVTNIDDFKFEDFEIEGYKPYPKITMQMAV 45


>gi|327401179|ref|YP_004342018.1| thymidylate synthase [Archaeoglobus veneficus SNP6]
 gi|327316687|gb|AEA47303.1| thymidylate synthase [Archaeoglobus veneficus SNP6]
          Length = 431

 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 12/129 (9%)

Query: 91  GPIYGVQWRS-WPDYDGNVIDQISSIVQSLRADPYSRRHIVS---AWNVALIDKMALPPC 146
           G +Y    R+ + + D   +DQ+   ++ LR +   R   V     W++   +    PPC
Sbjct: 285 GEVYTYAERARYCENDEVKVDQLYMCMEKLREERCRRDCYVGISRPWDLTSDE----PPC 340

Query: 147 HCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
              +Q       D  +L+   Y RS D++  +  N+ +++ LT  +A +  F    + H 
Sbjct: 341 LRGYQLVCEIQNDCNRLAGIFYMRSNDIYGAMHANMFAFATLTEYVAELTDFSGCTYYHF 400

Query: 203 LGDVHLYNN 211
             D H+Y  
Sbjct: 401 ANDAHIYGE 409


>gi|7688993|gb|AAF67636.1| thymidylate synthetase [Equus caballus]
          Length = 26

 Score = 38.5 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/24 (62%), Positives = 20/24 (83%)

Query: 172 LGIPFNIASYSLLTMMLASVIGFQ 195
           LG+PFNIASY+LLT M+A + G +
Sbjct: 3   LGVPFNIASYALLTYMIAHITGLK 26


>gi|158521756|ref|YP_001529626.1| thymidylate synthase-like protein [Desulfococcus oleovorans Hxd3]
 gi|158510582|gb|ABW67549.1| thymidylate synthase-like protein [Desulfococcus oleovorans Hxd3]
          Length = 263

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 105 DGNV-IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL--PPCHCLFQFYVDNGKLSC 161
           DG + I+QI  ++ + +   +  R+      VA    +AL  PPC       + + +L  
Sbjct: 144 DGRLYINQIEWVIDTYKR--FGARNNQMVLQVAEPSDLALLDPPCLRSIDTRIQDDQLIF 201

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +Y RS D++ G+P N+A    L   +A  IG   G  I     +HLY    + A L+  
Sbjct: 202 FVYFRSWDLWGGLPANLAGIQNLKEYMAGEIGVADGPMIVESKGLHLYGYAEDLAKLRCL 261

Query: 222 RS 223
           ++
Sbjct: 262 KT 263


>gi|299778996|ref|YP_003734190.1| hypothetical protein EME08_gp040 [Enterobacteria phage IME08]
 gi|298105725|gb|ADI55369.1| hypothetical protein [Enterobacteria phage IME08]
          Length = 232

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRR---HIVSAWNVALID--KMALPPCHCLFQFYVDNGK 158
           Y   ++ Q+ ++++ L+    SRR    I+   + AL+D  +    PC     +Y+ +G+
Sbjct: 110 YGPRIVAQLPALLKELKEKENSRRVVFQILQEQDQALLDSDESLEYPCTDSVTYYIRDGR 169

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
           L    + RS +  + +  +      L   +A   G   G + HT+   H++   F+
Sbjct: 170 LYAHTHMRSQNCAIVMQLDFYLQGKLMAFIAEQCGVGLGTYSHTMVSAHVFERDFD 225


>gi|289721260|gb|ADD17656.1| thymidylate synthase [Meles meles meles]
 gi|289721262|gb|ADD17657.1| thymidylate synthase [Meles meles meles]
 gi|289721264|gb|ADD17658.1| thymidylate synthase [Meles meles meles]
 gi|289721266|gb|ADD17659.1| thymidylate synthase [Meles meles leucurus]
 gi|289721268|gb|ADD17660.1| thymidylate synthase [Meles meles leucurus]
 gi|289721270|gb|ADD17661.1| thymidylate synthase [Meles meles leucurus]
 gi|289721272|gb|ADD17662.1| thymidylate synthase [Meles meles leucurus]
 gi|289721274|gb|ADD17663.1| thymidylate synthase [Meles meles leucurus]
 gi|289721276|gb|ADD17664.1| thymidylate synthase [Meles meles leucurus]
 gi|289721278|gb|ADD17665.1| thymidylate synthase [Meles anakuma]
 gi|289721280|gb|ADD17666.1| thymidylate synthase [Meles anakuma]
          Length = 24

 Score = 38.1 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/24 (62%), Positives = 20/24 (83%)

Query: 172 LGIPFNIASYSLLTMMLASVIGFQ 195
           LG+PFNIASY+LLT M+A + G +
Sbjct: 1   LGVPFNIASYALLTYMIAHITGLK 24


>gi|298493070|ref|YP_003723247.1| thymidylate synthase ['Nostoc azollae' 0708]
 gi|298234988|gb|ADI66124.1| thymidylate synthase ['Nostoc azollae' 0708]
          Length = 497

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 13/154 (8%)

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
           S+L ++   I D+  +++G +   YG + RSW   D     QI  +V  L  +  +   +
Sbjct: 255 SFLEQYISQILDDSPNREG-VKYTYGQRLRSWFGRD-----QIEQVVNKLVGEIDAASAV 308

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           ++ W+V   D+   P  + ++   VDN +LS     RS D+F   P N      L   + 
Sbjct: 309 MTLWDVKDHDQGGSPCLNHIWLRIVDN-ELSLTATLRSNDMFAAWPANAMGLRALQKHIR 367

Query: 190 SVIG------FQYGEFIHTLGDVHLYNNHFEQAD 217
             I        + G  I      H+Y++ +  A+
Sbjct: 368 DEIAKRSEYDLKMGPLITLSQSAHIYDDTWSNAE 401


>gi|161622540|ref|YP_001595168.1| hypothetical protein EpJS98_gp039 [Enterobacteria phage JS98]
 gi|238695195|ref|YP_002922388.1| hypothetical protein EpJS10_0039 [Enterobacteria phage JS10]
 gi|160331891|gb|AAU29230.2| hypothetical protein EpJS98_0039 [Enterobacteria phage JS98]
 gi|220029331|gb|ACL78265.1| hypothetical protein EpJS10_0039 [Enterobacteria phage JS10]
          Length = 232

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRR---HIVSAWNVALID--KMALPPCHCLFQFYVDNGK 158
           Y   ++ Q+ ++++ L+    SRR    I+   + AL+D  +    PC     +Y+ +G+
Sbjct: 110 YGPRIVAQLPALLKELKEKANSRRVVFQILQEQDQALLDSDESLEYPCTDSVTYYIRDGR 169

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
           L    + RS +  + +  +      L   +A   G   G + HT+   H++   F+
Sbjct: 170 LYAHTHMRSQNCAVVMQLDFYLQGKLMAFIAEQCGVGLGTYSHTMVSAHVFERDFD 225


>gi|254410174|ref|ZP_05023954.1| thymidylate synthase, putative [Microcoleus chthonoplastes PCC
           7420]
 gi|196183210|gb|EDX78194.1| thymidylate synthase, putative [Microcoleus chthonoplastes PCC
           7420]
          Length = 421

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%)

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG + RSW   D     QI  I+  L  +  +   ++S W+V   ++   P  + L+   
Sbjct: 201 YGQRLRSWFGKD-----QIEQIITKLIGEIDAASAVMSLWDVKDHEQGGSPCLNHLWARV 255

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG------FQYGEFIHTLGDVH 207
           VD+ +LS     RS D+++  P N      L   +   I        + G  I      H
Sbjct: 256 VDH-ELSLTATLRSNDMYMAWPSNAMGLRALQQYIRDEIAQRSSYDLRMGPLITISQSAH 314

Query: 208 LYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           +Y++ +E AD QL R  +  P +  N +  D
Sbjct: 315 IYDDTWENAD-QLIR--KQYPAICRNRDFYD 342


>gi|282898249|ref|ZP_06306240.1| Thymidylate synthase, putative [Raphidiopsis brookii D9]
 gi|281196780|gb|EFA71685.1| Thymidylate synthase, putative [Raphidiopsis brookii D9]
          Length = 513

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 21/162 (12%)

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
           SYL  +   + D+  +++G +   YG + RSW   D     QI  ++  L  D  S R +
Sbjct: 255 SYLPEYISQVLDDAPEQEG-VKYTYGKRLRSWFGKD-----QIQQVIDKLTNDFDSARAV 308

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           +S W+    D    PPC       + + +LS     RS D+F   P N      L   + 
Sbjct: 309 MSLWDPEQ-DHHDSPPCLNHIWVRIMDNQLSLTATFRSNDMFSAWPANAMGLRALQKYIY 367

Query: 190 SVI--------------GFQYGEFIHTLGDVHLYNNHFEQAD 217
             +                Q G  I      H+Y+  +E A+
Sbjct: 368 DRVHNGVDNKTNQDFFGQLQLGPLITISQSAHIYDECWESAE 409


>gi|311992571|ref|YP_004009439.1| putative thymidylate synthase [Acinetobacter phage Ac42]
 gi|298684354|gb|ADI96315.1| putative thymidylate synthase [Acinetobacter phage Ac42]
          Length = 235

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 5/112 (4%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRR---HIVSAWNVALID--KMALPPCHCLFQFYVDNGK 158
           Y   ++ Q+ ++++ LR    SRR    I+   +  L+D  +    PC     FY+ N +
Sbjct: 112 YGPRIVAQMPALLKELREKENSRRVVFQILQEQDQVLLDSDETLEYPCTDSITFYIRNNQ 171

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           L    + RS +  + +  +        M +A  +G   G + H++   H++ 
Sbjct: 172 LFMHTHMRSQNCAVVMQLDFYLMQRFMMYMAEQLGISVGTYSHSIVSAHVFE 223


>gi|170580066|ref|XP_001895098.1| hypothetical protein Bm1_18205 [Brugia malayi]
 gi|158598062|gb|EDP36047.1| hypothetical protein Bm1_18205 [Brugia malayi]
          Length = 83

 Score = 37.0 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 10/63 (15%)

Query: 82  EWADK-DGELGPIYGVQ-------WRSW-PDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
           +++D+ +G+L P+YG Q       +R    DY    IDQ+S I+  ++ +P++ R I++A
Sbjct: 21  DFSDRSEGDLRPVYGFQGNTVLAEYRGMDADYINQGIDQLSEIIDLMKNEPHN-RCILNA 79

Query: 133 WNV 135
           WNV
Sbjct: 80  WNV 82


>gi|157362353|dbj|BAF80312.1| thymidylate synthase [Macaca mulatta]
          Length = 68

 Score = 37.0 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 3  QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL 38
          QYL  + H+++ G  + D TG GT S +G Q R+ L
Sbjct: 32 QYLGQIEHILRCGVRKDDGTGTGTLSVYGMQARYSL 67


>gi|227431937|ref|ZP_03913958.1| possible thymidylate synthase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352306|gb|EEJ42511.1| possible thymidylate synthase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 168

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 13/47 (27%), Positives = 29/47 (61%)

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           +Y R+ D F G+  +I S++ +   +A  +  + G++ H++G +H+Y
Sbjct: 3   VYMRANDAFRGMVSDIFSFTFIQEFMARELNLKVGKYYHSMGTMHIY 49


>gi|298530528|ref|ZP_07017930.1| thymidylate synthase-like protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509902|gb|EFI33806.1| thymidylate synthase-like protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 224

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA-SVIGFQYGEFIHT 202
           PPC       + +G+L    Y RS D++ G P N+A  ++L   +A S+ G   G  + +
Sbjct: 141 PPCLRHIDMRIRDGRLIFYPYFRSWDLWGGFPANLAGIAVLQKYMADSIEGVSPGPILAS 200

Query: 203 LGDVHLYNNHFEQADLQLSRS 223
              +H+Y    E A ++  R 
Sbjct: 201 SKGLHIYGYAEELARIRTCRK 221


>gi|168804052|ref|YP_001686983.1| thymidylate synthase-like protein [Glossina pallidipes salivary
           gland hypertrophy virus]
 gi|146164239|gb|ABQ08808.1| thymidylate synthase-like protein [Glossina pallidipes salivary
           gland hypertrophy virus]
          Length = 87

 Score = 36.6 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR--TLPQMII 232
           P  IA YSLLT M+A V         +T+G    Y N +E   LQ     +    P++I+
Sbjct: 6   PLTIAKYSLLTYMIAYVCNLMPYSITYTMGVS--YINKYELDILQSYTKMKQYKFPRLIV 63

Query: 233 NPNIVDLLSFRYEDFTLRSYE 253
              + D+ SF   +F L  Y+
Sbjct: 64  EHYVKDIYSFNLGNFLLYDYQ 84


>gi|300869012|ref|ZP_07113615.1| hypothetical protein OSCI_3890023 [Oscillatoria sp. PCC 6506]
 gi|300332992|emb|CBN58807.1| hypothetical protein OSCI_3890023 [Oscillatoria sp. PCC 6506]
          Length = 354

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 1/101 (0%)

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP-PCHCLFQFYVDNGKLSCQLYQRS 167
           IDQ  +    +R    S+R  ++ +      + +   PC     F   NGKL    Y R+
Sbjct: 130 IDQFEASAHLIREKKSSKRVTLAIYQPNDCGRKSQDIPCIVSIIFSPRNGKLHTTAYMRA 189

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
            DV+  + +++   ++L   +A+    + G + H +  +HL
Sbjct: 190 NDVYRILCYDLFELTMLAEFMAAYTDIELGYYYHIVTSMHL 230


Searching..................................................done


Results from round 2




>gi|255066674|ref|ZP_05318529.1| thymidylate synthase [Neisseria sicca ATCC 29256]
 gi|255049002|gb|EET44466.1| thymidylate synthase [Neisseria sicca ATCC 29256]
          Length = 264

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 182/264 (68%), Positives = 221/264 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVFENGTDKSDRTGTGTRSVFGYQMRFDLSQGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD HLY+NHFEQA LQLSR+PRTLP M INP + DL 
Sbjct: 181 YALLTMMVAQVCGLEAGEFIHTLGDAHLYSNHFEQAKLQLSRAPRTLPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A V+V
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVAV 264


>gi|325205579|gb|ADZ01032.1| thymidylate synthase [Neisseria meningitidis M04-240196]
          Length = 264

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 181/264 (68%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R PRTLP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L  Y+PH  I A VSV
Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264


>gi|313667906|ref|YP_004048190.1| thymidylate synthase [Neisseria lactamica ST-640]
 gi|313005368|emb|CBN86802.1| thymidylate synthase [Neisseria lactamica 020-06]
          Length = 264

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264


>gi|254805456|ref|YP_003083677.1| Thymidylate synthase [Neisseria meningitidis alpha14]
 gi|254668998|emb|CBA07364.1| Thymidylate synthase [Neisseria meningitidis alpha14]
 gi|325142868|gb|EGC65235.1| thymidylate synthase [Neisseria meningitidis 961-5945]
 gi|325198801|gb|ADY94257.1| thymidylate synthase [Neisseria meningitidis G2136]
          Length = 264

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 180/264 (68%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R PRTLP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L  Y+PH  I A VSV
Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264


>gi|121635345|ref|YP_975590.1| thymidylate synthase [Neisseria meningitidis FAM18]
 gi|166231719|sp|A1KVB3|TYSY_NEIMF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120867051|emb|CAM10814.1| thymidylate synthase [Neisseria meningitidis FAM18]
 gi|325132802|gb|EGC55482.1| thymidylate synthase [Neisseria meningitidis M6190]
 gi|325138705|gb|EGC61257.1| thymidylate synthase [Neisseria meningitidis ES14902]
          Length = 264

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L  Y+PH  I A VSV
Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264


>gi|15677556|ref|NP_274712.1| thymidylate synthase [Neisseria meningitidis MC58]
 gi|304386810|ref|ZP_07369075.1| thymidylate synthase [Neisseria meningitidis ATCC 13091]
 gi|20455363|sp|Q9JY72|TYSY_NEIMB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|7226964|gb|AAF42056.1| thymidylate synthase [Neisseria meningitidis MC58]
 gi|261392072|emb|CAX49566.1| thymidylate synthase (TS; TSase) [Neisseria meningitidis 8013]
 gi|304339119|gb|EFM05208.1| thymidylate synthase [Neisseria meningitidis ATCC 13091]
 gi|316984858|gb|EFV63815.1| thymidylate synthase [Neisseria meningitidis H44/76]
 gi|325128751|gb|EGC51614.1| thymidylate synthase [Neisseria meningitidis N1568]
 gi|325140830|gb|EGC63340.1| thymidylate synthase [Neisseria meningitidis CU385]
 gi|325199699|gb|ADY95154.1| thymidylate synthase [Neisseria meningitidis H44/76]
 gi|325204666|gb|ADZ00120.1| thymidylate synthase [Neisseria meningitidis M01-240355]
          Length = 264

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 177/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++++ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L  Y+PH  I A VSV
Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264


>gi|269214226|ref|ZP_05986099.2| thymidylate synthase [Neisseria lactamica ATCC 23970]
 gi|269210433|gb|EEZ76888.1| thymidylate synthase [Neisseria lactamica ATCC 23970]
          Length = 266

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEVGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266


>gi|224826342|ref|ZP_03699444.1| Thymidylate synthase [Lutiella nitroferrum 2002]
 gi|224601443|gb|EEG07624.1| Thymidylate synthase [Lutiella nitroferrum 2002]
          Length = 264

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 177/264 (67%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G  + DRTG GT S FGYQMRFDL+ GFPLLTTKK+H KS+VHELL
Sbjct: 1   MKQYLDLMRHVREHGHYKSDRTGTGTLSVFGYQMRFDLADGFPLLTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G LGP+YG QWRSWP  DG  +DQI+++V+ ++
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDEWADENGNLGPVYGYQWRSWPAPDGRHVDQIANVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HTLGD HLY+NH EQAD QL+R PR LP M INP + DL 
Sbjct: 181 YALLTMMVAQVCGLKPGEFVHTLGDAHLYSNHLEQADEQLAREPRPLPVMKINPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  Y+P   I AKV+V
Sbjct: 241 AFRFEDFELEGYDPMPHIKAKVAV 264


>gi|325130730|gb|EGC53467.1| thymidylate synthase [Neisseria meningitidis OX99.30304]
 gi|325136647|gb|EGC59247.1| thymidylate synthase [Neisseria meningitidis M0579]
 gi|325201639|gb|ADY97093.1| thymidylate synthase [Neisseria meningitidis M01-240149]
 gi|325208626|gb|ADZ04078.1| thymidylate synthase [Neisseria meningitidis NZ-05/33]
          Length = 264

 Score =  411 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 177/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264


>gi|146280809|ref|YP_001170962.1| thymidylate synthase [Pseudomonas stutzeri A1501]
 gi|145569014|gb|ABP78120.1| thymidylate synthase [Pseudomonas stutzeri A1501]
          Length = 272

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL
Sbjct: 9   MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELL 68

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IWDEWAD++GELGP+YG QWRSWP  +G  IDQI++++  ++
Sbjct: 69  WFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIK 128

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 129 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 188

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   + GEFI + GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 189 YALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQADLQLTREPLPLPTMKLNPEVKDLF 248

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE H  I A V+V
Sbjct: 249 AFRFEDFELVGYEAHPHIKAPVAV 272


>gi|313674832|ref|YP_004052828.1| thymidylate synthase [Marivirga tractuosa DSM 4126]
 gi|312941530|gb|ADR20720.1| thymidylate synthase [Marivirga tractuosa DSM 4126]
          Length = 264

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L++H++  G  + DRTG GT S FGYQMRFDLS+GFP++TTKK+H +S++HELL
Sbjct: 1   MKQYHELMKHILDKGVQKGDRTGTGTISVFGYQMRFDLSEGFPVVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++GELGP+YG QWR+WP  DG  IDQIS I+  ++
Sbjct: 61  WFLKGETNIKYLKENGVSIWDEWADENGELGPVYGSQWRNWPTPDGQHIDQISQIIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWNVA +  MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NTPNSRRIMVSAWNVADVPNMALPPCHALFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+FIHTLGD HLY+NH EQ +LQLSR P  LP+M INPN+ ++ 
Sbjct: 181 YALLTMMVAQVCDLEPGDFIHTLGDAHLYSNHLEQTELQLSREPYPLPKMKINPNVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y+ H  I A V+V
Sbjct: 241 DFKFEDFELVDYQYHPHIKAPVAV 264


>gi|218768724|ref|YP_002343236.1| thymidylate synthase [Neisseria meningitidis Z2491]
 gi|20455362|sp|Q9JT57|TYSY_NEIMA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|121052732|emb|CAM09075.1| thymidylate synthase [Neisseria meningitidis Z2491]
 gi|319410956|emb|CBY91352.1| thymidylate synthase (TS; TSase) [Neisseria meningitidis WUE 2594]
          Length = 264

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++++ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264


>gi|325134758|gb|EGC57395.1| thymidylate synthase [Neisseria meningitidis M13399]
 gi|325145101|gb|EGC67384.1| thymidylate synthase [Neisseria meningitidis M01-240013]
          Length = 264

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY+NHFEQA LQL R P  LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHFEQAALQLEREPCALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264


>gi|59801705|ref|YP_208417.1| thymidylate synthase [Neisseria gonorrhoeae FA 1090]
 gi|239999430|ref|ZP_04719354.1| thymidylate synthase [Neisseria gonorrhoeae 35/02]
 gi|240014606|ref|ZP_04721519.1| thymidylate synthase [Neisseria gonorrhoeae DGI18]
 gi|240017051|ref|ZP_04723591.1| thymidylate synthase [Neisseria gonorrhoeae FA6140]
 gi|240081310|ref|ZP_04725853.1| thymidylate synthase [Neisseria gonorrhoeae FA19]
 gi|240113520|ref|ZP_04728010.1| thymidylate synthase [Neisseria gonorrhoeae MS11]
 gi|240116127|ref|ZP_04730189.1| thymidylate synthase [Neisseria gonorrhoeae PID18]
 gi|240118411|ref|ZP_04732473.1| thymidylate synthase [Neisseria gonorrhoeae PID1]
 gi|240121128|ref|ZP_04734090.1| thymidylate synthase [Neisseria gonorrhoeae PID24-1]
 gi|240123956|ref|ZP_04736912.1| thymidylate synthase [Neisseria gonorrhoeae PID332]
 gi|240126156|ref|ZP_04739042.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|240128633|ref|ZP_04741294.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|254494147|ref|ZP_05107318.1| thymidylate synthase [Neisseria gonorrhoeae 1291]
 gi|260440061|ref|ZP_05793877.1| thymidylate synthase [Neisseria gonorrhoeae DGI2]
 gi|268595249|ref|ZP_06129416.1| thymidylate synthase [Neisseria gonorrhoeae 35/02]
 gi|268597414|ref|ZP_06131581.1| thymidylate synthase [Neisseria gonorrhoeae FA19]
 gi|268599588|ref|ZP_06133755.1| thymidylate synthase [Neisseria gonorrhoeae MS11]
 gi|268601794|ref|ZP_06135961.1| thymidylate synthase [Neisseria gonorrhoeae PID18]
 gi|268604126|ref|ZP_06138293.1| thymidylate synthase [Neisseria gonorrhoeae PID1]
 gi|268682584|ref|ZP_06149446.1| thymidylate synthase [Neisseria gonorrhoeae PID332]
 gi|268684744|ref|ZP_06151606.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268687023|ref|ZP_06153885.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|75507349|sp|Q5F732|TYSY_NEIG1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|59718600|gb|AAW90005.1| putative thymidylate synthase B [Neisseria gonorrhoeae FA 1090]
 gi|226513187|gb|EEH62532.1| thymidylate synthase [Neisseria gonorrhoeae 1291]
 gi|268548638|gb|EEZ44056.1| thymidylate synthase [Neisseria gonorrhoeae 35/02]
 gi|268551202|gb|EEZ46221.1| thymidylate synthase [Neisseria gonorrhoeae FA19]
 gi|268583719|gb|EEZ48395.1| thymidylate synthase [Neisseria gonorrhoeae MS11]
 gi|268585925|gb|EEZ50601.1| thymidylate synthase [Neisseria gonorrhoeae PID18]
 gi|268588257|gb|EEZ52933.1| thymidylate synthase [Neisseria gonorrhoeae PID1]
 gi|268622868|gb|EEZ55268.1| thymidylate synthase [Neisseria gonorrhoeae PID332]
 gi|268625028|gb|EEZ57428.1| thymidylate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268627307|gb|EEZ59707.1| thymidylate synthase [Neisseria gonorrhoeae SK-93-1035]
          Length = 264

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAVVSV 264


>gi|293398657|ref|ZP_06642835.1| thymidylate synthase [Neisseria gonorrhoeae F62]
 gi|291611128|gb|EFF40225.1| thymidylate synthase [Neisseria gonorrhoeae F62]
          Length = 265

 Score =  411 bits (1056), Expect = e-113,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 2   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 62  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 122 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 181

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 182 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 241

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 242 AFKFEDFELEGYDPHPHIKAVVSV 265


>gi|226313973|ref|YP_002773869.1| thymidylate synthase [Brevibacillus brevis NBRC 100599]
 gi|254790230|sp|C0ZI91|TYSY_BREBN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226096923|dbj|BAH45365.1| thymidylate synthase [Brevibacillus brevis NBRC 100599]
          Length = 264

 Score =  411 bits (1056), Expect = e-113,   Method: Composition-based stats.
 Identities = 158/264 (59%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL + ++  G  + DRTG GT S FG+QMRFDLS+GFP++TTKK+H KS++HELL
Sbjct: 1   MKQYLDLCQRILDEGVIKEDRTGTGTTSVFGHQMRFDLSEGFPMVTTKKLHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW+EWAD++G+LGP+YG QWRS+   DG  +DQI  ++  ++
Sbjct: 61  WFLSGDTNVRYLQENGVRIWNEWADENGDLGPVYGSQWRSFTGRDGKTVDQIQWVIDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +DKMALPPCH LFQFYV NGKLSCQLYQRSGD FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPAELDKMALPPCHLLFQFYVANGKLSCQLYQRSGDTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT+GD HLY NH EQ  LQL+R P+ LP++++NP++  + 
Sbjct: 181 YALLTHMVAHVTGLEVGDFVHTIGDAHLYLNHIEQVKLQLTREPKPLPKLVLNPDVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YED  +  YE H  I  +V+V
Sbjct: 241 DFKYEDIEIVGYESHPHIKGEVAV 264


>gi|308389827|gb|ADO32147.1| thymidylate synthase [Neisseria meningitidis alpha710]
          Length = 266

 Score =  410 bits (1055), Expect = e-113,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY+NHFEQA LQL R P  LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHFEQAALQLEREPCALPVMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266


>gi|254671837|emb|CBA03996.1| Thymidylate synthase [Neisseria meningitidis alpha275]
          Length = 266

 Score =  410 bits (1055), Expect = e-113,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++++ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWPAPDGRHIDQIANVLEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266


>gi|194099130|ref|YP_002002215.1| thymidylate synthase [Neisseria gonorrhoeae NCCP11945]
 gi|291043350|ref|ZP_06569073.1| thymidylate synthase [Neisseria gonorrhoeae DGI2]
 gi|193934420|gb|ACF30244.1| thymidylate synthase [Neisseria gonorrhoeae NCCP11945]
 gi|291012956|gb|EFE04939.1| thymidylate synthase [Neisseria gonorrhoeae DGI2]
 gi|317164678|gb|ADV08219.1| thymidylate synthase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 266

 Score =  410 bits (1055), Expect = e-113,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAVVSV 266


>gi|291614975|ref|YP_003525132.1| thymidylate synthase [Sideroxydans lithotrophicus ES-1]
 gi|291585087|gb|ADE12745.1| thymidylate synthase [Sideroxydans lithotrophicus ES-1]
          Length = 264

 Score =  410 bits (1055), Expect = e-113,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G+ + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL
Sbjct: 1   MRQYLDLMQHVLEHGTKKSDRTGTGTTSVFGYQMRFDLSQGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N  YL  +GVSIWDEWAD+ G LGP+YG QWRSW   DG VIDQI   V+ +R
Sbjct: 61  WFLQGSTNTKYLKDNGVSIWDEWADEQGNLGPVYGKQWRSWETVDGRVIDQIKVAVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G +YG+F+HT GD HLY+NH EQ   QLSR PR LP M INP++ D+ 
Sbjct: 181 YALLTMMMAQVCGLKYGDFVHTFGDAHLYSNHMEQTATQLSREPRALPTMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL  Y+PH AI A V+V
Sbjct: 241 GFKFEDFTLEGYDPHPAIKAPVAV 264


>gi|297250452|ref|ZP_06934052.1| thymidylate synthase [Neisseria polysaccharea ATCC 43768]
 gi|296838954|gb|EFH22892.1| thymidylate synthase [Neisseria polysaccharea ATCC 43768]
          Length = 266

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 177/264 (67%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RH +  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHALDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEVGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266


>gi|172045633|sp|A4VGL9|TYSY_PSEU5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|327479077|gb|AEA82387.1| thymidylate synthase [Pseudomonas stutzeri DSM 4166]
          Length = 264

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL
Sbjct: 1   MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IWDEWAD++GELGP+YG QWRSWP  +G  IDQI++++  ++
Sbjct: 61  WFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   + GEFI + GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQADLQLTREPLPLPTMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE H  I A V+V
Sbjct: 241 AFRFEDFELVGYEAHPHIKAPVAV 264


>gi|161579483|ref|NP_296349.2| thymidylate synthase [Deinococcus radiodurans R1]
          Length = 264

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD LRH+   G+D+ DRTG GTRS FGYQMRFDLS+GFPL+TTK+VH KS+++ELL
Sbjct: 1   MKQYLDFLRHIRDHGTDKMDRTGTGTRSVFGYQMRFDLSEGFPLVTTKRVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSNV +L  HGV+IWDEWA + GELGP+YGVQWRSWPDY G  IDQIS +++ ++
Sbjct: 61  WFLRGDSNVRWLQEHGVTIWDEWAREGGELGPVYGVQWRSWPDYGGGQIDQISQVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ID+MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVAQIDEMALPPCHLLFQFYVADGKLSCQLYQRSADSFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFI T GD H+Y+NH EQ + QL R PR LP+M +NP + D+ 
Sbjct: 181 YALLTMMVAQVCGLEPGEFIWTGGDCHIYSNHMEQVERQLKREPRPLPKMRLNPAVKDMF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+YEDFTL  Y+PH  I A+V+V
Sbjct: 241 AFQYEDFTLEGYDPHPGIKAEVAV 264


>gi|261378912|ref|ZP_05983485.1| thymidylate synthase [Neisseria cinerea ATCC 14685]
 gi|269144729|gb|EEZ71147.1| thymidylate synthase [Neisseria cinerea ATCC 14685]
          Length = 264

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 179/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDSGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY NHFEQA+LQL R  R LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYRNHFEQAELQLGRECRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L  Y+PH  I A VSV
Sbjct: 241 SFKFEDFELEGYDPHPHIKAAVSV 264


>gi|261365658|ref|ZP_05978541.1| thymidylate synthase [Neisseria mucosa ATCC 25996]
 gi|288565822|gb|EFC87382.1| thymidylate synthase [Neisseria mucosa ATCC 25996]
          Length = 264

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 179/264 (67%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G+D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYHDLMRHVLENGTDKSDRTGTGTRSVFGYQMRFDLSQGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q GEFIHT GD HLY+NHFEQA LQLSR  R LP M INP + DL 
Sbjct: 181 YALLTMMIAQVCGLQAGEFIHTFGDAHLYSNHFEQAKLQLSRDFRALPVMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A V+V
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVAV 264


>gi|291618667|ref|YP_003521409.1| ThyA [Pantoea ananatis LMG 20103]
 gi|291153697|gb|ADD78281.1| ThyA [Pantoea ananatis LMG 20103]
          Length = 279

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R+V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 16  MKQYLDLMRYVLNEGTPKSDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 75

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD+ G LGP+YG QWRSW    G  IDQI+ +++ L+
Sbjct: 76  WFLQGDTNIGYLKENNVSIWDEWADEQGNLGPVYGKQWRSWGTASGQEIDQITKVIEQLK 135

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 136 RDPDSRRIIVSAWNVGELDEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 195

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQA LQL+R PR LP ++I      L 
Sbjct: 196 YALLVHMVAQQCDLDVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPTLVIKRKPASLF 255

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH AI A V+V
Sbjct: 256 DYRFDDFEIEGYDPHPAIKAPVAV 279


>gi|6460459|gb|AAF12166.1|AE002092_4 thymidylate synthase [Deinococcus radiodurans R1]
          Length = 387

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 177/263 (67%), Positives = 214/263 (81%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLD LRH+   G+D+ DRTG GTRS FGYQMRFDLS+GFPL+TTK+VH KS+++ELLW
Sbjct: 125 KQYLDFLRHIRDHGTDKMDRTGTGTRSVFGYQMRFDLSEGFPLVTTKRVHLKSIIYELLW 184

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGDSNV +L  HGV+IWDEWA + GELGP+YGVQWRSWPDY G  IDQIS +++ ++ 
Sbjct: 185 FLRGDSNVRWLQEHGVTIWDEWAREGGELGPVYGVQWRSWPDYGGGQIDQISQVIEQIKT 244

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR IVSAWNVA ID+MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIASY
Sbjct: 245 NPDSRRLIVSAWNVAQIDEMALPPCHLLFQFYVADGKLSCQLYQRSADSFLGVPFNIASY 304

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLTMM+A V G + GEFI T GD H+Y+NH EQ + QL R PR LP+M +NP + D+ +
Sbjct: 305 ALLTMMVAQVCGLEPGEFIWTGGDCHIYSNHMEQVERQLKREPRPLPKMRLNPAVKDMFA 364

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           F+YEDFTL  Y+PH  I A+V+V
Sbjct: 365 FQYEDFTLEGYDPHPGIKAEVAV 387


>gi|253996898|ref|YP_003048962.1| thymidylate synthase [Methylotenera mobilis JLW8]
 gi|253983577|gb|ACT48435.1| thymidylate synthase [Methylotenera mobilis JLW8]
          Length = 264

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+DL++HV + G+ + DRTG GT S FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYIDLVQHVFEHGNKKEDRTGTGTVSVFGYQMRFNLAEGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV IWDEWAD++G LGP+YG QWR+WP  DG+ IDQI+ +V S++
Sbjct: 61  WFLQGSTNIAYLKENGVRIWDEWADENGNLGPVYGYQWRNWPKPDGSHIDQIAQVVNSIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+M LPPCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y+NHFEQ   QL R PR LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYSNHFEQMHEQLQRDPRPLPTMRINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDFTL  Y+PH  I  +V+V
Sbjct: 241 SFKFEDFTLEGYDPHPPIKGQVAV 264


>gi|225076554|ref|ZP_03719753.1| hypothetical protein NEIFLAOT_01602 [Neisseria flavescens
           NRL30031/H210]
 gi|224952117|gb|EEG33326.1| hypothetical protein NEIFLAOT_01602 [Neisseria flavescens
           NRL30031/H210]
          Length = 266

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 216/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FGYQMRFDL +GFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGRGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 122

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 123 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 182

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR  R+LP M INP + DL 
Sbjct: 183 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRSLPTMKINPEVKDLF 242

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 243 AFKFEDFELEGYDPHPHIKAAVSV 266


>gi|34496482|ref|NP_900697.1| thymidylate synthase [Chromobacterium violaceum ATCC 12472]
 gi|62901352|sp|Q7NZ95|TYSY_CHRVO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|34102336|gb|AAQ58702.1| thymidylate synthase [Chromobacterium violaceum ATCC 12472]
          Length = 264

 Score =  408 bits (1048), Expect = e-112,   Method: Composition-based stats.
 Identities = 175/264 (66%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV++ G D+ DRTG GTRS FGYQMRFDL+ GFPL+TTKK H +S++HELL
Sbjct: 1   MQQYLDLMRHVLEHGHDKADRTGTGTRSVFGYQMRFDLAAGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQIS ++  ++
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQISQLLDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDQMALPPCHSLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q G+F+HTLGD HLY+NH EQA LQL+R PR LP M +NP + DL 
Sbjct: 181 YALLTMMVAQVCGLQPGDFVHTLGDAHLYSNHLEQARLQLTRDPRPLPTMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++DF L  Y+PH  I A+V+V
Sbjct: 241 AFTFDDFALEGYDPHPHIKAQVAV 264


>gi|300021803|ref|YP_003754414.1| thymidylate synthase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523624|gb|ADJ22093.1| thymidylate synthase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 264

 Score =  408 bits (1048), Expect = e-112,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR V   G  + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H KS++ ELL
Sbjct: 1   MQQYLDLLRRVRTEGVKKTDRTGTGTLSVFGHQMRFDLSEGFPLVTTKKLHVKSIIVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL  + VSIWDEWAD +GELGP+YG QWR+W   DG  IDQI  +V++L+
Sbjct: 61  WFLSGATNIEYLKANDVSIWDEWADPEGELGPVYGKQWRAWSAPDGETIDQIKEVVETLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A I +MAL PCHCL QFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRIIVSAWNPADIPRMALAPCHCLVQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GD HLY NH EQADLQLSR+PR LP+M INP +  + 
Sbjct: 181 YALLTMMMAQVTGLEPGEFVHTFGDAHLYLNHLEQADLQLSRTPRALPRMKINPAVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF+L  Y+P   I A V+V
Sbjct: 241 DFKYEDFSLEGYDPWPHIKAPVAV 264


>gi|15595539|ref|NP_249033.1| thymidylate synthase [Pseudomonas aeruginosa PAO1]
 gi|107099326|ref|ZP_01363244.1| hypothetical protein PaerPA_01000338 [Pseudomonas aeruginosa PACS2]
 gi|116054070|ref|YP_788513.1| thymidylate synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889083|ref|YP_002437947.1| thymidylate synthase [Pseudomonas aeruginosa LESB58]
 gi|254237422|ref|ZP_04930745.1| thymidylate synthase [Pseudomonas aeruginosa C3719]
 gi|254243441|ref|ZP_04936763.1| thymidylate synthase [Pseudomonas aeruginosa 2192]
 gi|296386838|ref|ZP_06876337.1| thymidylate synthase [Pseudomonas aeruginosa PAb1]
 gi|22096233|sp|Q9I6F1|TYSY_PSEAE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|122261789|sp|Q02U73|TYSY_PSEAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713171|sp|B7V2Q5|TYSY_PSEA8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|9946191|gb|AAG03731.1|AE004472_3 thymidylate synthase [Pseudomonas aeruginosa PAO1]
 gi|115589291|gb|ABJ15306.1| thymidylate synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169353|gb|EAZ54864.1| thymidylate synthase [Pseudomonas aeruginosa C3719]
 gi|126196819|gb|EAZ60882.1| thymidylate synthase [Pseudomonas aeruginosa 2192]
 gi|218769306|emb|CAW25066.1| thymidylate synthase [Pseudomonas aeruginosa LESB58]
          Length = 264

 Score =  408 bits (1048), Expect = e-112,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL
Sbjct: 1   MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  L+
Sbjct: 61  WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMAMLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L  YE H  I A V+V
Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264


>gi|91775259|ref|YP_545015.1| thymidylate synthase [Methylobacillus flagellatus KT]
 gi|91775403|ref|YP_545159.1| thymidylate synthase [Methylobacillus flagellatus KT]
 gi|115502470|sp|Q9RAM7|TYSY_METFK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91709246|gb|ABE49174.1| thymidylate synthase [Methylobacillus flagellatus KT]
 gi|91709390|gb|ABE49318.1| thymidylate synthase [Methylobacillus flagellatus KT]
          Length = 264

 Score =  407 bits (1047), Expect = e-112,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G  + DRTG GT S FGYQMRFDLS+GFPLLTTKKVH KS++HELL
Sbjct: 1   MKVYHDLMRHVLEQGHKKEDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV+IWDEWAD +G LGP+YG QWR+WP  DG  IDQIS ++ +++
Sbjct: 61  WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGGHIDQISEVIAAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +DKM LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADVDKMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+F+HTLGD H+Y NH EQ   QLSR P  LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVCDLKLGDFVHTLGDAHIYLNHLEQVKEQLSREPYPLPVMRINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDFTL +Y+ H AI A V+V
Sbjct: 241 AFRFEDFTLENYQSHPAIKAPVAV 264


>gi|27381623|ref|NP_773152.1| thymidylate synthase [Bradyrhizobium japonicum USDA 110]
 gi|62901370|sp|Q89G35|TYSY_BRAJA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|27354791|dbj|BAC51777.1| thymidylate synthase [Bradyrhizobium japonicum USDA 110]
          Length = 264

 Score =  407 bits (1047), Expect = e-112,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL  ++  G+++ DRTG GT S FG+QMRF+LS GFP+LTTK++  K++VHELL
Sbjct: 1   MHQYQDLLERILSDGAEKTDRTGTGTLSVFGHQMRFNLSAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+++V  ++
Sbjct: 61  WFLKGDTNIKYLRDNGVTIWDEWADANGDLGPVYGHQWRSWPAPDGRSIDQIANVVDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +DKMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPAEVDKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+H+ GD HLY+NH EQA LQL+R+PR LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSFGDTHLYSNHLEQAKLQLTRAPRALPVMRINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFR+EDF L  Y+PH  I A+V+V
Sbjct: 241 SFRFEDFELVGYDPHPHIKAEVAV 264


>gi|319637791|ref|ZP_07992557.1| thymidylate synthase [Neisseria mucosa C102]
 gi|317400946|gb|EFV81601.1| thymidylate synthase [Neisseria mucosa C102]
          Length = 264

 Score =  407 bits (1047), Expect = e-112,   Method: Composition-based stats.
 Identities = 179/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV+  G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKENNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR  R+LP M INP I DL 
Sbjct: 181 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQARLQLSRDFRSLPTMKINPEIKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 241 AFKFEDFELEGYDPHPHIKAAVSV 264


>gi|152988193|ref|YP_001345831.1| thymidylate synthase [Pseudomonas aeruginosa PA7]
 gi|166231724|sp|A6UYE6|TYSY_PSEA7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|150963351|gb|ABR85376.1| thymidylate synthase [Pseudomonas aeruginosa PA7]
          Length = 264

 Score =  407 bits (1047), Expect = e-112,   Method: Composition-based stats.
 Identities = 175/264 (66%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFPL+TTKK H KS+VHELL
Sbjct: 1   MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAAGFPLVTTKKCHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  L+
Sbjct: 61  WFLQGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMTMLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVAGLRPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L  Y+ H  I A V+V
Sbjct: 241 DFRFEDFELVGYQAHPHIKAPVAV 264


>gi|294669491|ref|ZP_06734558.1| hypothetical protein NEIELOOT_01389 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308404|gb|EFE49647.1| hypothetical protein NEIELOOT_01389 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 264

 Score =  407 bits (1046), Expect = e-112,   Method: Composition-based stats.
 Identities = 174/264 (65%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L+RHV++ G D+ DRTG GTRS FGYQMRFDL++GFPLLTTKK+H +S++HELL
Sbjct: 1   MKQYLGLMRHVMQNGHDKSDRTGTGTRSVFGYQMRFDLAQGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q GEF+HTLGD H+Y+NHFEQ +LQL+R PR LP+M +N  + DL 
Sbjct: 181 YALLTMMIAQVCGLQPGEFVHTLGDAHIYSNHFEQTELQLAREPRALPKMKLNHAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y+PH  I A V+V
Sbjct: 241 DFKFEDFELADYDPHPHIKAAVAV 264


>gi|294500806|ref|YP_003564506.1| thymidylate synthase [Bacillus megaterium QM B1551]
 gi|295706151|ref|YP_003599226.1| thymidylate synthase [Bacillus megaterium DSM 319]
 gi|294350743|gb|ADE71072.1| thymidylate synthase [Bacillus megaterium QM B1551]
 gi|294803810|gb|ADF40876.1| thymidylate synthase [Bacillus megaterium DSM 319]
          Length = 264

 Score =  407 bits (1046), Expect = e-112,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L  HV+  G+ + DRTG GT STFGYQMRF+L +GFP+LTTKK+H KS++HELL
Sbjct: 1   MKQYLELCEHVLANGTKKEDRTGTGTISTFGYQMRFNLQEGFPVLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSWP  DG  IDQI++++  ++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADENGELGPVYGHQWRSWPTPDGEKIDQITNVINQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV+ +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRLMVSAWNVSDVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+F+HT GD H+Y+NH EQ +LQL+R P  LP+M INP++  + 
Sbjct: 181 YALLTMMVAQVCDLEPGDFVHTFGDAHIYSNHIEQVNLQLTREPHALPKMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y  H  I   VSV
Sbjct: 241 DFKFEDFELVDYNAHPHIKGAVSV 264


>gi|237720128|ref|ZP_04550609.1| thymidylate synthase [Bacteroides sp. 2_2_4]
 gi|260174020|ref|ZP_05760432.1| thymidylate synthase [Bacteroides sp. D2]
 gi|293373111|ref|ZP_06619476.1| thymidylate synthase [Bacteroides ovatus SD CMC 3f]
 gi|299148006|ref|ZP_07041069.1| thymidylate synthase [Bacteroides sp. 3_1_23]
 gi|315922289|ref|ZP_07918529.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|229450680|gb|EEO56471.1| thymidylate synthase [Bacteroides sp. 2_2_4]
 gi|292631930|gb|EFF50543.1| thymidylate synthase [Bacteroides ovatus SD CMC 3f]
 gi|298514189|gb|EFI38075.1| thymidylate synthase [Bacteroides sp. 3_1_23]
 gi|313696164|gb|EFS32999.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 264

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG +YG QWRSWPDY+G  IDQIS +V++++
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV +G+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HT GD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264


>gi|72118031|gb|AAZ60294.1| thymidylate synthase [Ralstonia eutropha JMP134]
          Length = 281

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDLS+GFP++TTKK+H KS++ ELL
Sbjct: 18  MKQYLDFMRHVFEHGTEKADRTGTGTRSVFGYQMRFDLSQGFPVVTTKKLHLKSIILELL 77

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GVSIWDEWAD++GELGP+YG QWRSWP  DG  +DQI+ ++  +R
Sbjct: 78  WFLQGSTNVRWLQENGVSIWDEWADENGELGPVYGSQWRSWPTPDGRHVDQITDLLNQIR 137

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 138 ENPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 197

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD H+Y+NH+EQ   QLSR P  LP + I      + 
Sbjct: 198 YALLTHMIAQQTGLDVGDFVWTGGDCHIYSNHYEQVQTQLSREPLPLPTLKIVRKPDSIF 257

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF L  Y+ H AI A V+V
Sbjct: 258 DYRYEDFELVGYQSHPAIKAPVAV 281


>gi|330505459|ref|YP_004382328.1| thymidylate synthase [Pseudomonas mendocina NK-01]
 gi|328919745|gb|AEB60576.1| thymidylate synthase [Pseudomonas mendocina NK-01]
          Length = 264

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFP++TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRHVREHGTFKEDRTGTGTYSVFGYQMRFDLADGFPIVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD++G LGP+YG QWRSWP  +G  IDQI+ +++ ++
Sbjct: 61  WFLQGDTNIKYLKDNGVSIWDEWADENGNLGPVYGYQWRSWPAPNGESIDQIAKLIEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   Q GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DLL
Sbjct: 181 YALLTLMVAQVCDLQPGEFIWTGGDCHLYANHIEQADLQLTRQPLPLPTMKLNPEVKDLL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  YE H  I A V+V
Sbjct: 241 AFKFEDFELVGYEAHPHIKAPVAV 264


>gi|6647289|gb|AAF21131.1|L78665_5 thymidylate synthase [Methylobacillus flagellatus]
          Length = 264

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 168/264 (63%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G  + DRTG GT S FGYQMRFDLS+GFPLLTTKKVH  +++HELL
Sbjct: 1   MKVYHDLMRHVLEQGHKKEDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKVHLNAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV+IWDEWAD +G LGP+YG QWR+WP  DG  IDQIS ++ +++
Sbjct: 61  WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGGHIDQISEVIAAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNVA +DKM LPPCH LFQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVADVDKMELPPCHALFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+F+HTLGD H+Y NH EQ   QLSR P  LP M INP + D+ 
Sbjct: 181 YALLTMMVARVCDLELGDFVHTLGDAHIYLNHLEQVKEQLSREPYPLPVMRINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDFTL +Y+ H AI A V+V
Sbjct: 241 AFRFEDFTLENYQSHPAIKAPVAV 264


>gi|313112042|ref|ZP_07797826.1| thymidylate synthase [Pseudomonas aeruginosa 39016]
 gi|310884328|gb|EFQ42922.1| thymidylate synthase [Pseudomonas aeruginosa 39016]
          Length = 264

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL
Sbjct: 1   MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+ ++  L+
Sbjct: 61  WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIAHLMAMLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L  YE H  I A V+V
Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264


>gi|237713988|ref|ZP_04544469.1| thymidylate synthase [Bacteroides sp. D1]
 gi|262407040|ref|ZP_06083589.1| thymidylate synthase [Bacteroides sp. 2_1_22]
 gi|294809774|ref|ZP_06768458.1| thymidylate synthase [Bacteroides xylanisolvens SD CC 1b]
 gi|298479700|ref|ZP_06997900.1| thymidylate synthase [Bacteroides sp. D22]
 gi|229445812|gb|EEO51603.1| thymidylate synthase [Bacteroides sp. D1]
 gi|262355743|gb|EEZ04834.1| thymidylate synthase [Bacteroides sp. 2_1_22]
 gi|294443014|gb|EFG11797.1| thymidylate synthase [Bacteroides xylanisolvens SD CC 1b]
 gi|295084876|emb|CBK66399.1| thymidylate synthase [Bacteroides xylanisolvens XB1A]
 gi|298274090|gb|EFI15651.1| thymidylate synthase [Bacteroides sp. D22]
          Length = 264

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISIFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG +YG QWRSWPDY+G  IDQIS +V++L+
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV +G+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HT GD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264


>gi|284799616|ref|ZP_05984412.2| thymidylate synthase [Neisseria subflava NJ9703]
 gi|284797529|gb|EFC52876.1| thymidylate synthase [Neisseria subflava NJ9703]
          Length = 303

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV+  G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL
Sbjct: 40  MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 99

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 100 WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 159

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 160 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 219

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY+NH EQA LQLSR  R LP M INP + DL 
Sbjct: 220 YALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRKLPTMKINPEVKDLF 279

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+PH  I A VSV
Sbjct: 280 AFKFEDFELEGYDPHPHIKAAVSV 303


>gi|327395047|dbj|BAK12469.1| thymidylate synthase ThyA [Pantoea ananatis AJ13355]
          Length = 264

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R+V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRYVLNEGTPKSDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD+ G LGP+YG QWRSW    G  IDQI+ +++ L+
Sbjct: 61  WFLQGDTNIGYLKENNVSIWDEWADEQGNLGPVYGKQWRSWGTASGQEIDQITKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RDPDSRRIIVSAWNVGELDEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQA LQL+R PR LP ++I      L 
Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPTLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH AI A V+V
Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAV 264


>gi|110637694|ref|YP_677901.1| thymidylate synthase [Cytophaga hutchinsonii ATCC 33406]
 gi|123163654|sp|Q11VK5|TYSY_CYTH3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|110280375|gb|ABG58561.1| thymidylate synthase [Cytophaga hutchinsonii ATCC 33406]
          Length = 264

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++H++  G  + DRTG GT S FGYQMRF+L +GFPLLTTKK+H +S+ HELL
Sbjct: 1   MKQYHDLMQHILDQGVKKEDRTGTGTVSVFGYQMRFNLQEGFPLLTTKKLHMRSITHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G LGP+YG QWRSWP  DG  IDQI+++V  ++
Sbjct: 61  WFLQGDTNIKYLKDNNVSIWDEWADENGNLGPVYGYQWRSWPTPDGKHIDQITNVVNMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I+KM LPPCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPDSRRLIVSAWNVGEIEKMKLPPCHAFFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q G+F+HTLGD HLY+NH EQA LQLSR  R LP M INP++  + 
Sbjct: 181 YALLTMMVAQVCGLQAGDFVHTLGDAHLYSNHLEQAKLQLSRDFRPLPAMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL  Y+PH  I A V+V
Sbjct: 241 DFKFEDFTLEGYDPHPHIKAAVAV 264


>gi|146309227|ref|YP_001189692.1| thymidylate synthase [Pseudomonas mendocina ymp]
 gi|166231725|sp|A4Y044|TYSY_PSEMY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145577428|gb|ABP86960.1| thymidylate synthase [Pseudomonas mendocina ymp]
          Length = 264

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + DRTG GT S FGYQMRFDL+ GFP++TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRHVREHGTFKEDRTGTGTYSVFGYQMRFDLADGFPIVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  +G  IDQI+ +++ +R
Sbjct: 61  WFLQGDTNIKYLKDNGVSIWDEWADENGDLGPVYGYQWRSWPAPNGESIDQIAKLIEMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+++MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   Q GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DLL
Sbjct: 181 YALLTLMVAQVCDLQPGEFIWTGGDCHLYANHIEQADLQLTRQPLPLPTMKLNPEVKDLL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE H  I A V+V
Sbjct: 241 AFRFEDFELVGYEAHPHIKAPVAV 264


>gi|254470038|ref|ZP_05083442.1| thymidylate synthase [Pseudovibrio sp. JE062]
 gi|211960349|gb|EEA95545.1| thymidylate synthase [Pseudovibrio sp. JE062]
          Length = 264

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+R ++  G  + DRTG GT+S FG+QMRF+LS+GFP++TTKK+H +S++HELL
Sbjct: 1   MQQYLELMRRIMDEGVVKEDRTGTGTKSVFGHQMRFNLSEGFPVVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + V IWDEWAD++G+LGP+YG QWRSWP  DG+ IDQI+++VQ ++
Sbjct: 61  WFLAGDTNIKYLKDNKVRIWDEWADENGDLGPVYGYQWRSWPKPDGSSIDQIANVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D MALPPCH LFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNPALVDDMALPPCHSLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+F+HTLGD HLY NH EQA+LQLSR PR LP M INP + D+ 
Sbjct: 181 YALLTMMIAQVCDLEPGDFVHTLGDAHLYLNHMEQAELQLSREPRALPVMRINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF L  Y+PH  I   V+V
Sbjct: 241 AFRYEDFALEGYDPHPHIKGVVAV 264


>gi|160882708|ref|ZP_02063711.1| hypothetical protein BACOVA_00666 [Bacteroides ovatus ATCC 8483]
 gi|156111878|gb|EDO13623.1| hypothetical protein BACOVA_00666 [Bacteroides ovatus ATCC 8483]
          Length = 264

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+ + DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTKKDDRTGTGTISIFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG IYG QWRSWPDY+G  IDQIS +V++++
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISEVVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV +G+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HT GD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMRINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264


>gi|15965880|ref|NP_386233.1| thymidylate synthase [Sinorhizobium meliloti 1021]
 gi|307309638|ref|ZP_07589291.1| thymidylate synthase [Sinorhizobium meliloti BL225C]
 gi|307321777|ref|ZP_07601165.1| thymidylate synthase [Sinorhizobium meliloti AK83]
 gi|22096227|sp|Q92NQ5|TYSY_RHIME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|15075149|emb|CAC46706.1| Probable thymidylate synthase [Sinorhizobium meliloti 1021]
 gi|306892599|gb|EFN23397.1| thymidylate synthase [Sinorhizobium meliloti AK83]
 gi|306899973|gb|EFN30595.1| thymidylate synthase [Sinorhizobium meliloti BL225C]
          Length = 264

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 184/264 (69%), Positives = 223/264 (84%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HVI  G+DR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL
Sbjct: 1   MRQYLDLLEHVITTGTDRGDRTGTGTRSVFGYQMRFDLSQGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV+YL  +GVSIWDEWAD++GELGP+YG QWRSWP  DG  IDQI+++V+ L+
Sbjct: 61  WFLRGDTNVAYLKDNGVSIWDEWADENGELGPVYGYQWRSWPTPDGRHIDQIAALVEGLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NHFEQA LQL+R+P+ LP+M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLEAGDFVHTLGDAHIYRNHFEQAQLQLTRTPKPLPKMEINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFR+EDF L  YE  + I A V+V
Sbjct: 241 SFRFEDFELVGYEADSHIKAPVAV 264


>gi|238896342|ref|YP_002921078.1| thymidylate synthase [Klebsiella pneumoniae NTUH-K2044]
 gi|262039838|ref|ZP_06013112.1| thymidylate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330009185|ref|ZP_08306468.1| thymidylate synthase [Klebsiella sp. MS 92-3]
 gi|238548660|dbj|BAH65011.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259042807|gb|EEW43804.1| thymidylate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328534871|gb|EGF61409.1| thymidylate synthase [Klebsiella sp. MS 92-3]
          Length = 264

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 157/264 (59%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQIS+++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQISTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|49083028|gb|AAT50914.1| PA0342 [synthetic construct]
          Length = 265

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 175/264 (66%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G+ + D TG GT S FG+QMRFDL+ GFPL+TTKK H KS+VHELL
Sbjct: 1   MKQYLDLMRHVREHGTFKSDCTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  L+
Sbjct: 61  WFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLMAMLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G Q GEFI T GD HLY NH EQADLQL+R P  LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L  YE H  I A V+V
Sbjct: 241 DFRFEDFELVGYEAHPHIKAPVAV 264


>gi|87307092|ref|ZP_01089238.1| thymidylate synthase [Blastopirellula marina DSM 3645]
 gi|87290465|gb|EAQ82353.1| thymidylate synthase [Blastopirellula marina DSM 3645]
          Length = 264

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G  + DRTG GT S FG+QMRF L+ GFP +TTKK+H +S++HELL
Sbjct: 1   MRQYLDLMQRILDEGVRKEDRTGTGTLSIFGHQMRFRLADGFPAVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV+YL  + VSIWDEWAD+ GELGP+YG QWRSWP  DG  IDQI+++++ ++
Sbjct: 61  WFLQGATNVAYLRENKVSIWDEWADEAGELGPVYGYQWRSWPTPDGGHIDQITNLIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA + +M LPPCH LFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVADVPRMKLPPCHLLFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HT GD HLY NH +Q  LQLSR PR LP M INP + DLL
Sbjct: 181 YALLTMMVAQVTGLEPGDFVHTFGDAHLYTNHMDQTQLQLSREPRPLPTMRINPAVTDLL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L +Y+PH  I A V+V
Sbjct: 241 KFRFEDFELINYDPHPHISAPVAV 264


>gi|329296900|ref|ZP_08254236.1| thymidylate synthase [Plautia stali symbiont]
          Length = 264

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+++ DRTG GT S FG+QMRF+L  GFPL+TTKKVH +S++HELL
Sbjct: 1   MKQYLDLMQHVLNEGAEKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKVHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+++ YL  + V+IWDEWAD++G+LGP+YG QWRSW    G  IDQIS +++ L+
Sbjct: 61  WFLKGDTSIGYLKENKVTIWDEWADENGDLGPVYGKQWRSWGKASGEEIDQISKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL+R PR LP+++I      + 
Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH AI A V+V
Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264


>gi|325266347|ref|ZP_08133025.1| thymidylate synthase [Kingella denitrificans ATCC 33394]
 gi|324982140|gb|EGC17774.1| thymidylate synthase [Kingella denitrificans ATCC 33394]
          Length = 264

 Score =  404 bits (1039), Expect = e-111,   Method: Composition-based stats.
 Identities = 174/264 (65%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV+  G+D+ DRTG GTRS FGYQMRF+L+ GFP+LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLQHVLDNGTDKSDRTGTGTRSVFGYQMRFNLADGFPVLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G+LG +YG QWRSW   DG  +DQI+++V+ +R
Sbjct: 61  WFLAGDTNIRYLKENGVRIWDEWADENGDLGRVYGAQWRSWRGADGETVDQIANVVRQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A +D MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QTPDSRRLIVSAWNPAEVDDMALPPCHALFQFYVANGQLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q GEF+HTLGD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLTMMVAQVCGLQAGEFVHTLGDAHLYQNHLEQARLQLTREPRALPKMHINPDVRDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+++DFTL  Y+PH  I A+VSV
Sbjct: 241 AFKFDDFTLSDYDPHPHIKAEVSV 264


>gi|152971755|ref|YP_001336864.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|166231708|sp|A6TDG3|TYSY_KLEP7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|150956604|gb|ABR78634.1| thymidylate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 264

 Score =  404 bits (1039), Expect = e-111,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|75676536|ref|YP_318957.1| thymidylate synthase [Nitrobacter winogradskyi Nb-255]
 gi|123773189|sp|Q3SQ36|TYSY_NITWN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|74421406|gb|ABA05605.1| thymidylate synthase [Nitrobacter winogradskyi Nb-255]
          Length = 264

 Score =  404 bits (1038), Expect = e-111,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+QY DLL  ++  G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+ ++S+VHELL
Sbjct: 1   MNQYHDLLERILGEGTEKHDRTGTGTLSVFGHQMRFDLASGFPMLTTKKLPFRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ YL  +GVSIWDEWAD +G+LGP+YG QWRSWP  DG  IDQI++++  ++
Sbjct: 61  WFLRGETNIKYLKDNGVSIWDEWADANGDLGPVYGSQWRSWPARDGRGIDQIANVIDLIQ 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADVDRMALPPCHCLFQFYVAGGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+H+LGD HLY+NH +QA LQLSR  R LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYSNHLDQARLQLSRPTRPLPTMTINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF L +Y+PH  I A+V+V
Sbjct: 241 AFRYEDFRLENYDPHPHIKAEVAV 264


>gi|288554022|ref|YP_003425957.1| thymidylate synthase [Bacillus pseudofirmus OF4]
 gi|288545182|gb|ADC49065.1| thymidylate synthase [Bacillus pseudofirmus OF4]
          Length = 264

 Score =  404 bits (1038), Expect = e-111,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L  HV+K G  + DRTG GT STFGYQMRFDL++GFP LTTKK+H +S++HELL
Sbjct: 1   MDQYLALCEHVLKNGETKSDRTGTGTISTFGYQMRFDLAEGFPALTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IW+EWAD++G+LGP+YG QWRSW   +G V+DQIS +++ ++
Sbjct: 61  WFLKGDTNIGYLKENNVRIWNEWADENGDLGPVYGKQWRSWEGANGKVVDQISELIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ID+MAL PCHCLFQFYV++GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRLIVSAWNPAEIDEMALAPCHCLFQFYVNDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEF+HT GD H+Y+NH EQ  LQL+R PR LP+M IN  +  + 
Sbjct: 181 YALLTMMIAQVTDLEPGEFVHTFGDAHIYSNHVEQVKLQLTREPRALPKMKINKEVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F  EDF L  Y+PH  I  +VSV
Sbjct: 241 DFTIEDFELTDYDPHPHIKGEVSV 264


>gi|39936555|ref|NP_948831.1| thymidylate synthase [Rhodopseudomonas palustris CGA009]
 gi|62901322|sp|Q6N447|TYSY_RHOPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|39650411|emb|CAE28934.1| thymidylate synthase [Rhodopseudomonas palustris CGA009]
          Length = 264

 Score =  404 bits (1038), Expect = e-111,   Method: Composition-based stats.
 Identities = 172/264 (65%), Positives = 216/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  ++  G+++ DRTG GT S FG+QMRFDL+ GFP+LTTK++  K++VHELL
Sbjct: 1   MIQYQDLLERILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGGSIDQIANVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLMVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEF+HTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ 
Sbjct: 181 YALLTLMVAQVTGLKPGEFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDFTL  Y+PH  I A+V+V
Sbjct: 241 GFRYEDFTLTGYDPHPHIKAEVAV 264


>gi|153808882|ref|ZP_01961550.1| hypothetical protein BACCAC_03183 [Bacteroides caccae ATCC 43185]
 gi|149128708|gb|EDM19926.1| hypothetical protein BACCAC_03183 [Bacteroides caccae ATCC 43185]
          Length = 264

 Score =  404 bits (1038), Expect = e-111,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG IYG QWRSWPDY+G  IDQIS  +++++
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV +G+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 QNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HT GD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTFGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFKFEDFELVNYDPHPHIAGVVAV 264


>gi|317049336|ref|YP_004116984.1| thymidylate synthase [Pantoea sp. At-9b]
 gi|316950953|gb|ADU70428.1| thymidylate synthase [Pantoea sp. At-9b]
          Length = 264

 Score =  404 bits (1038), Expect = e-111,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+++ DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMQHVLNEGAEKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V+IWDEWAD++G+LGP+YG QWRSW + +G  IDQIS +++ L+
Sbjct: 61  WFLQGDTNIGYLKDNKVTIWDEWADENGDLGPVYGKQWRSWGNANGEQIDQISRVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL+R PR LP++II      + 
Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLIIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+PH AI A V++
Sbjct: 241 DYQFEDFEIEGYDPHPAIKAPVAI 264


>gi|322831560|ref|YP_004211587.1| thymidylate synthase [Rahnella sp. Y9602]
 gi|321166761|gb|ADW72460.1| thymidylate synthase [Rahnella sp. Y9602]
          Length = 264

 Score =  404 bits (1038), Expect = e-111,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMQKVLDEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ++S+V+ L+
Sbjct: 61  WFLKGETNIAYLRENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLASVVEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+PH AI A V++
Sbjct: 241 DYNFEDFEIEGYDPHPAIKAPVAI 264


>gi|323978558|gb|EGB73640.1| thymidylate synthase [Escherichia coli TW10509]
          Length = 264

 Score =  404 bits (1038), Expect = e-111,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q +LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTNLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|146312910|ref|YP_001177984.1| thymidylate synthase [Enterobacter sp. 638]
 gi|166991230|sp|A4WE03|TYSY_ENT38 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145319786|gb|ABP61933.1| thymidylate synthase [Enterobacter sp. 638]
          Length = 264

 Score =  403 bits (1037), Expect = e-111,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  + VSIWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLRENNVSIWDEWADENGNLGPVYGHQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|304396692|ref|ZP_07378572.1| thymidylate synthase [Pantoea sp. aB]
 gi|304355488|gb|EFM19855.1| thymidylate synthase [Pantoea sp. aB]
          Length = 264

 Score =  403 bits (1037), Expect = e-111,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMQHVLHEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + VSIWDEWAD++G+LGP+YG QWRSW    G  IDQ+S +++ L+
Sbjct: 61  WFLKGDTNIAYLRENKVSIWDEWADENGDLGPVYGKQWRSWGTASGQEIDQLSQVMEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  + +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RDPDSRRIIVSAWNVGELSEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQA LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH AI A V+V
Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264


>gi|161611264|ref|YP_295138.2| thymidylate synthase [Ralstonia eutropha JMP134]
          Length = 264

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDLS+GFP++TTKK+H KS++ ELL
Sbjct: 1   MKQYLDFMRHVFEHGTEKADRTGTGTRSVFGYQMRFDLSQGFPVVTTKKLHLKSIILELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GVSIWDEWAD++GELGP+YG QWRSWP  DG  +DQI+ ++  +R
Sbjct: 61  WFLQGSTNVRWLQENGVSIWDEWADENGELGPVYGSQWRSWPTPDGRHVDQITDLLNQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ENPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD H+Y+NH+EQ   QLSR P  LP + I      + 
Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHIYSNHYEQVQTQLSREPLPLPTLKIVRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF L  Y+ H AI A V+V
Sbjct: 241 DYRYEDFELVGYQSHPAIKAPVAV 264


>gi|283786527|ref|YP_003366392.1| thymidylate synthase [Citrobacter rodentium ICC168]
 gi|282949981|emb|CBG89609.1| thymidylate synthase [Citrobacter rodentium ICC168]
          Length = 264

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTKKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI+++++ L+
Sbjct: 61  WFLQGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVMKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHLEQTRLQLSREPRALPKLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|237729788|ref|ZP_04560269.1| thymidylate synthetase [Citrobacter sp. 30_2]
 gi|226908394|gb|EEH94312.1| thymidylate synthetase [Citrobacter sp. 30_2]
          Length = 264

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|300776697|ref|ZP_07086555.1| thymidylate synthase B [Chryseobacterium gleum ATCC 35910]
 gi|300502207|gb|EFK33347.1| thymidylate synthase B [Chryseobacterium gleum ATCC 35910]
          Length = 264

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL
Sbjct: 1   MQNYLDLLQHILDNGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSW   DG V+DQI+ ++  ++
Sbjct: 61  WFLKGDTNIKYLKDNGVSIWDEWADENGDLGPVYGAQWRSWSGADGKVVDQITEVIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I  MAL PCH LFQFYV +GKLS QLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNVAEIPNMALAPCHALFQFYVADGKLSLQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V   + G+++H+ GDVH+YNNHFEQ + QL+R PR LP M +NP++ ++ 
Sbjct: 181 YALLLMMVAQVCELEVGDYVHSFGDVHIYNNHFEQVNRQLAREPRALPTMKLNPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDFTL +Y+PH  I A V++
Sbjct: 241 DFDFEDFTLENYDPHPGIKAPVAI 264


>gi|20455513|sp|O33380|TYSY_NEIGO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 265

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 176/265 (66%), Positives = 213/265 (80%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GT S FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYLDLMRHVLDNGTDKSDRTGTGTLSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWD-EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           WFL+GD+N+ YL  + VSIWD EWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ +
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQI 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G LSCQLYQRS D+FLG+PFNIA
Sbjct: 121 KKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGNLSCQLYQRSADIFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL
Sbjct: 181 SYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDL 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
            +F++EDF L  Y+PH  I A VSV
Sbjct: 241 FAFKFEDFELEGYDPHPHIKAVVSV 265


>gi|332970396|gb|EGK09388.1| thymidylate synthase [Kingella kingae ATCC 23330]
          Length = 264

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++HV+  G+D+ DRTG GTRS FGYQMRF+L+ GFP+LTTKK+H KS++HELL
Sbjct: 1   MKPYLDLMQHVLAHGNDKSDRTGTGTRSVFGYQMRFNLADGFPVLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IWDEWAD++G LG +YG QWRSW   +G  IDQI+++V+ ++
Sbjct: 61  WFLQGDTNIRYLQENGVKIWDEWADENGNLGRVYGAQWRSWRGANGETIDQIANLVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPAEVDDMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMMLA V G Q GEF+HTLGD HLY NH EQA LQLSR PR+LP+M INPN+ D+ 
Sbjct: 181 YALLTMMLAQVCGLQAGEFVHTLGDAHLYRNHLEQAQLQLSREPRSLPKMRINPNVQDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++DF L  Y+PH  I A VSV
Sbjct: 241 AFTFDDFELVDYDPHPHIKADVSV 264


>gi|149196226|ref|ZP_01873281.1| thymidylate synthase [Lentisphaera araneosa HTCC2155]
 gi|149140487|gb|EDM28885.1| thymidylate synthase [Lentisphaera araneosa HTCC2155]
          Length = 264

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HVIK G D+ DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLLDHVIKNGVDKSDRTGTGTRSVFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G LGP+YG QWRSW   DG  IDQI+ ++++++
Sbjct: 61  WFLTGDTNIKYLKDNGVSIWDEWADEEGNLGPVYGYQWRSWKTPDGRTIDQIAQLIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV+ +D MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TKPDSRRLIVSAWNVSDVDNMALPPCHSLFQFYVADNKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   +YG+F+HT GD H+Y+NHFEQA LQLSR  R LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVCDLEYGDFVHTFGDAHIYSNHFEQAKLQLSRDTRPLPTMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF +EDFTL  Y+PH  I A V++
Sbjct: 241 SFTFEDFTLEGYDPHPHIKAPVAI 264


>gi|206577831|ref|YP_002236751.1| thymidylate synthase [Klebsiella pneumoniae 342]
 gi|288933717|ref|YP_003437776.1| thymidylate synthase [Klebsiella variicola At-22]
 gi|290511203|ref|ZP_06550572.1| thymidylate synthase [Klebsiella sp. 1_1_55]
 gi|206566889|gb|ACI08665.1| thymidylate synthase [Klebsiella pneumoniae 342]
 gi|288888446|gb|ADC56764.1| thymidylate synthase [Klebsiella variicola At-22]
 gi|289776196|gb|EFD84195.1| thymidylate synthase [Klebsiella sp. 1_1_55]
          Length = 264

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHDNNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQ +LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|238021900|ref|ZP_04602326.1| hypothetical protein GCWU000324_01804 [Kingella oralis ATCC 51147]
 gi|237866514|gb|EEP67556.1| hypothetical protein GCWU000324_01804 [Kingella oralis ATCC 51147]
          Length = 264

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV++ G  + DRTG GTRS FGYQMRFDLS+GFP LTTKK+H KS++HELL
Sbjct: 1   MQQYLDLMRHVLQNGVTKSDRTGTGTRSVFGYQMRFDLSQGFPALTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G+LG +YG QWRSW   +G  IDQI ++VQ ++
Sbjct: 61  WFLSGDTNIRYLKENGVRIWDEWADENGDLGRVYGAQWRSWRGANGETIDQIRNLVQQIQ 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNPAEVDSMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMMLA V G Q GEFIHTLGD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLTMMLAQVCGLQAGEFIHTLGDAHLYLNHLEQAQLQLTREPRPLPKMHINPDVRDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR++DF L  Y+PH  I A+VSV
Sbjct: 241 AFRFDDFELADYDPHPHIKAQVSV 264


>gi|1065359|pdb|1TLC|A Chain A, Thymidylate Synthase Complexed With Dgmp And Folate Analog
           1843u89
 gi|1065360|pdb|1TLC|B Chain B, Thymidylate Synthase Complexed With Dgmp And Folate Analog
           1843u89
 gi|1310775|pdb|1TSD|A Chain A, Thymidylate Synthase Complex With 2'-Deoxyuridine 5'-
           Monophosphate (Dump) And Folate Analog 1843u89
 gi|1310776|pdb|1TSD|B Chain B, Thymidylate Synthase Complex With 2'-Deoxyuridine 5'-
           Monophosphate (Dump) And Folate Analog 1843u89
 gi|3318670|pdb|1DDU|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717 And
           2', 5'-Dideoxyuridine (Ddurd)
 gi|3318671|pdb|1DDU|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717 And
           2', 5'-Dideoxyuridine (Ddurd)
 gi|3318685|pdb|1TDU|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717 And
           2'- Deoxyuridine (Durd)
 gi|3318686|pdb|1TDU|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717 And
           2'- Deoxyuridine (Durd)
 gi|3318724|pdb|1AN5|A Chain A, E. Coli Thymidylate Synthase In Complex With Cb3717
 gi|3318725|pdb|1AN5|B Chain B, E. Coli Thymidylate Synthase In Complex With Cb3717
 gi|3891613|pdb|1AXW|A Chain A, E. Coli Thymidylate Synthase In Complex With Methotrexate
           (Mtx) And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|3891614|pdb|1AXW|B Chain B, E. Coli Thymidylate Synthase In Complex With Methotrexate
           (Mtx) And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|157829994|pdb|1AOB|A Chain A, E. Coli Thymidylate Synthase Complexed With Ddurd
 gi|157830243|pdb|1BDU|A Chain A, E. Coli Thymidylate Synthase Complexed With Durd
 gi|157830328|pdb|1BID|A Chain A, E. Coli Thymidylate Synthase Complexed With Dump
 gi|157833963|pdb|1TJS|A Chain A, E. Coli Thymidylate Synthase
 gi|157834008|pdb|1TRG|A Chain A, E. Coli Thymidylate Synthase In Symmetric Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|157880165|pdb|1SYN|A Chain A, E. Coli Thymidylate Synthase In Complex With Bw1843u89 And
           2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|157880166|pdb|1SYN|B Chain B, E. Coli Thymidylate Synthase In Complex With Bw1843u89 And
           2'-Deoxyuridine 5'-Monophosphate (Dump)
          Length = 265

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 2   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 62  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 122 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 181

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 182 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 241

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 242 DYRFEDFEIEGYDPHPGIKAPVAI 265


>gi|15803346|ref|NP_289379.1| thymidylate synthase [Escherichia coli O157:H7 EDL933]
 gi|15832938|ref|NP_311711.1| thymidylate synthase [Escherichia coli O157:H7 str. Sakai]
 gi|16130731|ref|NP_417304.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|26249257|ref|NP_755297.1| thymidylate synthase [Escherichia coli CFT073]
 gi|74313395|ref|YP_311814.1| thymidylate synthase [Shigella sonnei Ss046]
 gi|89109610|ref|AP_003390.1| thymidylate synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|91212223|ref|YP_542209.1| thymidylate synthase [Escherichia coli UTI89]
 gi|110642995|ref|YP_670725.1| thymidylate synthase [Escherichia coli 536]
 gi|117625080|ref|YP_854068.1| thymidylate synthase [Escherichia coli APEC O1]
 gi|157156066|ref|YP_001464162.1| thymidylate synthase [Escherichia coli E24377A]
 gi|168751042|ref|ZP_02776064.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4113]
 gi|168758211|ref|ZP_02783218.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4401]
 gi|168764657|ref|ZP_02789664.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4501]
 gi|168766799|ref|ZP_02791806.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4486]
 gi|168777651|ref|ZP_02802658.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4196]
 gi|168778820|ref|ZP_02803827.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4076]
 gi|168788090|ref|ZP_02813097.1| thymidylate synthase [Escherichia coli O157:H7 str. EC869]
 gi|168801690|ref|ZP_02826697.1| thymidylate synthase [Escherichia coli O157:H7 str. EC508]
 gi|170082395|ref|YP_001731715.1| thymidylate synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170684262|ref|YP_001744995.1| thymidylate synthase [Escherichia coli SMS-3-5]
 gi|170765924|ref|ZP_02900735.1| thymidylate synthase [Escherichia albertii TW07627]
 gi|188494993|ref|ZP_03002263.1| thymidylate synthase [Escherichia coli 53638]
 gi|191168602|ref|ZP_03030385.1| thymidylate synthase [Escherichia coli B7A]
 gi|191171260|ref|ZP_03032810.1| thymidylate synthase [Escherichia coli F11]
 gi|193065099|ref|ZP_03046173.1| thymidylate synthase [Escherichia coli E22]
 gi|193071410|ref|ZP_03052325.1| thymidylate synthase [Escherichia coli E110019]
 gi|194426405|ref|ZP_03058960.1| thymidylate synthase [Escherichia coli B171]
 gi|194434328|ref|ZP_03066592.1| thymidylate synthase [Shigella dysenteriae 1012]
 gi|195936429|ref|ZP_03081811.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4024]
 gi|208806510|ref|ZP_03248847.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4206]
 gi|208814146|ref|ZP_03255475.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4045]
 gi|208818648|ref|ZP_03258968.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4042]
 gi|209400848|ref|YP_002272290.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4115]
 gi|209920275|ref|YP_002294359.1| thymidylate synthase [Escherichia coli SE11]
 gi|215488145|ref|YP_002330576.1| thymidylate synthase [Escherichia coli O127:H6 str. E2348/69]
 gi|217327216|ref|ZP_03443299.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14588]
 gi|218555376|ref|YP_002388289.1| thymidylate synthase [Escherichia coli IAI1]
 gi|218559839|ref|YP_002392752.1| thymidylate synthase [Escherichia coli S88]
 gi|218690953|ref|YP_002399165.1| thymidylate synthase [Escherichia coli ED1a]
 gi|218696423|ref|YP_002404090.1| thymidylate synthase [Escherichia coli 55989]
 gi|218701541|ref|YP_002409170.1| thymidylate synthase [Escherichia coli IAI39]
 gi|218706321|ref|YP_002413840.1| thymidylate synthase [Escherichia coli UMN026]
 gi|227888391|ref|ZP_04006196.1| thymidylate synthase [Escherichia coli 83972]
 gi|237706513|ref|ZP_04536994.1| thymidylate synthetase [Escherichia sp. 3_2_53FAA]
 gi|238901962|ref|YP_002927758.1| thymidylate synthetase [Escherichia coli BW2952]
 gi|254037878|ref|ZP_04871936.1| thymidylate synthetase [Escherichia sp. 1_1_43]
 gi|254794765|ref|YP_003079602.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14359]
 gi|256024671|ref|ZP_05438536.1| thymidylate synthase [Escherichia sp. 4_1_40B]
 gi|260845489|ref|YP_003223267.1| thymidylate synthetase ThyA [Escherichia coli O103:H2 str. 12009]
 gi|260856939|ref|YP_003230830.1| thymidylate synthetase ThyA [Escherichia coli O26:H11 str. 11368]
 gi|260869506|ref|YP_003235908.1| thymidylate synthetase ThyA [Escherichia coli O111:H- str. 11128]
 gi|261226126|ref|ZP_05940407.1| thymidylate synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256618|ref|ZP_05949151.1| thymidylate synthetase ThyA [Escherichia coli O157:H7 str. FRIK966]
 gi|291284153|ref|YP_003500971.1| Thymidylate synthase [Escherichia coli O55:H7 str. CB9615]
 gi|293406316|ref|ZP_06650242.1| thymidylate synthase [Escherichia coli FVEC1412]
 gi|293412172|ref|ZP_06654895.1| thymidylate synthase [Escherichia coli B354]
 gi|293416071|ref|ZP_06658711.1| thymidylate synthase [Escherichia coli B185]
 gi|293449151|ref|ZP_06663572.1| thymidylate synthase [Escherichia coli B088]
 gi|298382052|ref|ZP_06991649.1| thyA [Escherichia coli FVEC1302]
 gi|300815754|ref|ZP_07095978.1| thymidylate synthase [Escherichia coli MS 107-1]
 gi|300820616|ref|ZP_07100767.1| thymidylate synthase [Escherichia coli MS 119-7]
 gi|300898112|ref|ZP_07116478.1| thymidylate synthase [Escherichia coli MS 198-1]
 gi|300906645|ref|ZP_07124334.1| thymidylate synthase [Escherichia coli MS 84-1]
 gi|300920317|ref|ZP_07136755.1| thymidylate synthase [Escherichia coli MS 115-1]
 gi|300923189|ref|ZP_07139244.1| thymidylate synthase [Escherichia coli MS 182-1]
 gi|300936248|ref|ZP_07151181.1| thymidylate synthase [Escherichia coli MS 21-1]
 gi|300950561|ref|ZP_07164468.1| thymidylate synthase [Escherichia coli MS 116-1]
 gi|300958146|ref|ZP_07170303.1| thymidylate synthase [Escherichia coli MS 175-1]
 gi|300980528|ref|ZP_07175054.1| thymidylate synthase [Escherichia coli MS 45-1]
 gi|300995837|ref|ZP_07181269.1| thymidylate synthase [Escherichia coli MS 200-1]
 gi|301026203|ref|ZP_07189669.1| thymidylate synthase [Escherichia coli MS 196-1]
 gi|301027499|ref|ZP_07190836.1| thymidylate synthase [Escherichia coli MS 69-1]
 gi|301049380|ref|ZP_07196344.1| thymidylate synthase [Escherichia coli MS 185-1]
 gi|301302964|ref|ZP_07209091.1| thymidylate synthase [Escherichia coli MS 124-1]
 gi|301326156|ref|ZP_07219542.1| thymidylate synthase [Escherichia coli MS 78-1]
 gi|301645205|ref|ZP_07245158.1| thymidylate synthase [Escherichia coli MS 146-1]
 gi|306812269|ref|ZP_07446467.1| thymidylate synthase [Escherichia coli NC101]
 gi|307139511|ref|ZP_07498867.1| thymidylate synthase [Escherichia coli H736]
 gi|307310563|ref|ZP_07590211.1| thymidylate synthase [Escherichia coli W]
 gi|309793875|ref|ZP_07688300.1| thymidylate synthase [Escherichia coli MS 145-7]
 gi|331643512|ref|ZP_08344643.1| thymidylate synthase [Escherichia coli H736]
 gi|331648587|ref|ZP_08349675.1| thymidylate synthase [Escherichia coli M605]
 gi|331658975|ref|ZP_08359917.1| thymidylate synthase [Escherichia coli TA206]
 gi|331664389|ref|ZP_08365295.1| thymidylate synthase [Escherichia coli TA143]
 gi|331669559|ref|ZP_08370405.1| thymidylate synthase [Escherichia coli TA271]
 gi|331674312|ref|ZP_08375072.1| thymidylate synthase [Escherichia coli TA280]
 gi|331678805|ref|ZP_08379479.1| thymidylate synthase [Escherichia coli H591]
 gi|331684470|ref|ZP_08385062.1| thymidylate synthase [Escherichia coli H299]
 gi|67474758|sp|P0A884|TYSY_ECOLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|67474759|sp|P0A885|TYSY_ECOL6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|67474760|sp|P0A886|TYSY_ECO57 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123048907|sp|Q0TE05|TYSY_ECOL5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123266005|sp|Q1R7I6|TYSY_ECOUT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123759566|sp|Q3YY33|TYSY_SHISS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231697|sp|A1AF39|TYSY_ECOK1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166991228|sp|A7ZQT3|TYSY_ECO24 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713166|sp|B7MLH3|TYSY_ECO45 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713167|sp|B7NVX2|TYSY_ECO7I RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713168|sp|B7LY83|TYSY_ECO8A RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713169|sp|B7N759|TYSY_ECOLU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790236|sp|B7UHP4|TYSY_ECO27 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790237|sp|B7LF04|TYSY_ECO55 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790238|sp|B7MZC6|TYSY_ECO81 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|259550774|sp|C4ZZX9|TYSY_ECOBW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|494741|pdb|2BBQ|A Chain A, Structural Basis For Recognition Of Polyglutamyl Folates
           By Thymidylate Synthase
 gi|494742|pdb|2BBQ|B Chain B, Structural Basis For Recognition Of Polyglutamyl Folates
           By Thymidylate Synthase
 gi|2781311|pdb|2KCE|A Chain A, Binding Of The Anticancer Drug Zd1694 To E. Coli
           Thymidylate Synthase: Assessing Specificity And Affinity
 gi|2781312|pdb|2KCE|B Chain B, Binding Of The Anticancer Drug Zd1694 To E. Coli
           Thymidylate Synthase: Assessing Specificity And Affinity
 gi|157836897|pdb|3TMS|A Chain A, Plastic Adaptation Toward Mutations In Proteins:
           Structural Comparison Of Thymidylate Synthases
 gi|12517312|gb|AAG57938.1|AE005511_6 thymidylate synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|26109664|gb|AAN81867.1|AE016765_269 Thymidylate synthase [Escherichia coli CFT073]
 gi|147987|gb|AAA24675.1| thymidylate synthase [Escherichia coli]
 gi|1789191|gb|AAC75866.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|13363156|dbj|BAB37107.1| thymidylate synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|73856872|gb|AAZ89579.1| thymidylate synthetase [Shigella sonnei Ss046]
 gi|85675643|dbj|BAE76896.1| thymidylate synthetase [Escherichia coli str. K12 substr. W3110]
 gi|91073797|gb|ABE08678.1| thymidylate synthetase [Escherichia coli UTI89]
 gi|110344587|gb|ABG70824.1| thymidylate synthase [Escherichia coli 536]
 gi|115514204|gb|ABJ02279.1| thymidylate synthetase [Escherichia coli APEC O1]
 gi|157078096|gb|ABV17804.1| thymidylate synthase [Escherichia coli E24377A]
 gi|169890230|gb|ACB03937.1| thymidylate synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170125070|gb|EDS94001.1| thymidylate synthase [Escherichia albertii TW07627]
 gi|170521980|gb|ACB20158.1| thymidylate synthase [Escherichia coli SMS-3-5]
 gi|187767149|gb|EDU30993.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4196]
 gi|188014880|gb|EDU53002.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4113]
 gi|188490192|gb|EDU65295.1| thymidylate synthase [Escherichia coli 53638]
 gi|189003343|gb|EDU72329.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4076]
 gi|189354949|gb|EDU73368.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4401]
 gi|189363818|gb|EDU82237.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4486]
 gi|189365398|gb|EDU83814.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4501]
 gi|189372183|gb|EDU90599.1| thymidylate synthase [Escherichia coli O157:H7 str. EC869]
 gi|189376199|gb|EDU94615.1| thymidylate synthase [Escherichia coli O157:H7 str. EC508]
 gi|190901348|gb|EDV61114.1| thymidylate synthase [Escherichia coli B7A]
 gi|190908560|gb|EDV68149.1| thymidylate synthase [Escherichia coli F11]
 gi|192927230|gb|EDV81850.1| thymidylate synthase [Escherichia coli E22]
 gi|192955272|gb|EDV85760.1| thymidylate synthase [Escherichia coli E110019]
 gi|194415713|gb|EDX31980.1| thymidylate synthase [Escherichia coli B171]
 gi|194417391|gb|EDX33496.1| thymidylate synthase [Shigella dysenteriae 1012]
 gi|208726311|gb|EDZ75912.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4206]
 gi|208735423|gb|EDZ84110.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4045]
 gi|208738771|gb|EDZ86453.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4042]
 gi|209162248|gb|ACI39681.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4115]
 gi|209761050|gb|ACI78837.1| thymidylate synthetase [Escherichia coli]
 gi|209761052|gb|ACI78838.1| thymidylate synthetase [Escherichia coli]
 gi|209761054|gb|ACI78839.1| thymidylate synthetase [Escherichia coli]
 gi|209761056|gb|ACI78840.1| thymidylate synthetase [Escherichia coli]
 gi|209913534|dbj|BAG78608.1| thymidylate synthase [Escherichia coli SE11]
 gi|215266217|emb|CAS10644.1| thymidylate synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|217319583|gb|EEC28008.1| thymidylate synthase [Escherichia coli O157:H7 str. TW14588]
 gi|218353155|emb|CAU99013.1| thymidylate synthetase [Escherichia coli 55989]
 gi|218362144|emb|CAQ99753.1| thymidylate synthetase [Escherichia coli IAI1]
 gi|218366608|emb|CAR04362.1| thymidylate synthetase [Escherichia coli S88]
 gi|218371527|emb|CAR19365.1| thymidylate synthetase [Escherichia coli IAI39]
 gi|218428517|emb|CAR09443.2| thymidylate synthetase [Escherichia coli ED1a]
 gi|218433418|emb|CAR14320.1| thymidylate synthetase [Escherichia coli UMN026]
 gi|222034541|emb|CAP77283.1| Thymidylate synthase [Escherichia coli LF82]
 gi|226839502|gb|EEH71523.1| thymidylate synthetase [Escherichia sp. 1_1_43]
 gi|226899553|gb|EEH85812.1| thymidylate synthetase [Escherichia sp. 3_2_53FAA]
 gi|227834660|gb|EEJ45126.1| thymidylate synthase [Escherichia coli 83972]
 gi|238863661|gb|ACR65659.1| thymidylate synthetase [Escherichia coli BW2952]
 gi|254594165|gb|ACT73526.1| thymidylate synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|257755588|dbj|BAI27090.1| thymidylate synthetase ThyA [Escherichia coli O26:H11 str. 11368]
 gi|257760636|dbj|BAI32133.1| thymidylate synthetase ThyA [Escherichia coli O103:H2 str. 12009]
 gi|257765862|dbj|BAI37357.1| thymidylate synthetase ThyA [Escherichia coli O111:H- str. 11128]
 gi|260448125|gb|ACX38547.1| Thymidylate synthase [Escherichia coli DH1]
 gi|281179852|dbj|BAI56182.1| thymidylate synthetase [Escherichia coli SE15]
 gi|284922763|emb|CBG35851.1| thymidylate synthase [Escherichia coli 042]
 gi|290764026|gb|ADD57987.1| Thymidylate synthase [Escherichia coli O55:H7 str. CB9615]
 gi|291322241|gb|EFE61670.1| thymidylate synthase [Escherichia coli B088]
 gi|291426322|gb|EFE99354.1| thymidylate synthase [Escherichia coli FVEC1412]
 gi|291432260|gb|EFF05242.1| thymidylate synthase [Escherichia coli B185]
 gi|291468943|gb|EFF11434.1| thymidylate synthase [Escherichia coli B354]
 gi|294493395|gb|ADE92151.1| thymidylate synthase [Escherichia coli IHE3034]
 gi|298277192|gb|EFI18708.1| thyA [Escherichia coli FVEC1302]
 gi|299879795|gb|EFI88006.1| thymidylate synthase [Escherichia coli MS 196-1]
 gi|300298822|gb|EFJ55207.1| thymidylate synthase [Escherichia coli MS 185-1]
 gi|300304692|gb|EFJ59212.1| thymidylate synthase [Escherichia coli MS 200-1]
 gi|300315168|gb|EFJ64952.1| thymidylate synthase [Escherichia coli MS 175-1]
 gi|300358170|gb|EFJ74040.1| thymidylate synthase [Escherichia coli MS 198-1]
 gi|300395007|gb|EFJ78545.1| thymidylate synthase [Escherichia coli MS 69-1]
 gi|300401546|gb|EFJ85084.1| thymidylate synthase [Escherichia coli MS 84-1]
 gi|300409228|gb|EFJ92766.1| thymidylate synthase [Escherichia coli MS 45-1]
 gi|300412642|gb|EFJ95952.1| thymidylate synthase [Escherichia coli MS 115-1]
 gi|300420498|gb|EFK03809.1| thymidylate synthase [Escherichia coli MS 182-1]
 gi|300450129|gb|EFK13749.1| thymidylate synthase [Escherichia coli MS 116-1]
 gi|300458573|gb|EFK22066.1| thymidylate synthase [Escherichia coli MS 21-1]
 gi|300526880|gb|EFK47949.1| thymidylate synthase [Escherichia coli MS 119-7]
 gi|300531683|gb|EFK52745.1| thymidylate synthase [Escherichia coli MS 107-1]
 gi|300841628|gb|EFK69388.1| thymidylate synthase [Escherichia coli MS 124-1]
 gi|300847121|gb|EFK74881.1| thymidylate synthase [Escherichia coli MS 78-1]
 gi|301076475|gb|EFK91281.1| thymidylate synthase [Escherichia coli MS 146-1]
 gi|305854307|gb|EFM54745.1| thymidylate synthase [Escherichia coli NC101]
 gi|306909458|gb|EFN39953.1| thymidylate synthase [Escherichia coli W]
 gi|307554821|gb|ADN47596.1| thymidylate synthetase [Escherichia coli ABU 83972]
 gi|307625581|gb|ADN69885.1| thymidylate synthase [Escherichia coli UM146]
 gi|308122282|gb|EFO59544.1| thymidylate synthase [Escherichia coli MS 145-7]
 gi|309703182|emb|CBJ02516.1| thymidylate synthase [Escherichia coli ETEC H10407]
 gi|312947378|gb|ADR28205.1| thymidylate synthase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315062133|gb|ADT76460.1| thymidylate synthetase [Escherichia coli W]
 gi|315137431|dbj|BAJ44590.1| thymidylate synthase [Escherichia coli DH1]
 gi|315256688|gb|EFU36656.1| thymidylate synthase [Escherichia coli MS 85-1]
 gi|315289384|gb|EFU48779.1| thymidylate synthase [Escherichia coli MS 110-3]
 gi|315293800|gb|EFU53152.1| thymidylate synthase [Escherichia coli MS 153-1]
 gi|315295782|gb|EFU55099.1| thymidylate synthase [Escherichia coli MS 16-3]
 gi|315615214|gb|EFU95851.1| thymidylate synthase [Escherichia coli 3431]
 gi|320176416|gb|EFW51470.1| Thymidylate synthase [Shigella dysenteriae CDC 74-1112]
 gi|320182266|gb|EFW57169.1| Thymidylate synthase [Shigella boydii ATCC 9905]
 gi|320189156|gb|EFW63815.1| Thymidylate synthase [Escherichia coli O157:H7 str. EC1212]
 gi|320194962|gb|EFW69591.1| Thymidylate synthase [Escherichia coli WV_060327]
 gi|320202466|gb|EFW77036.1| Thymidylate synthase [Escherichia coli EC4100B]
 gi|320640475|gb|EFX10014.1| thymidylate synthase [Escherichia coli O157:H7 str. G5101]
 gi|320656517|gb|EFX24413.1| thymidylate synthase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662036|gb|EFX29437.1| thymidylate synthase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667111|gb|EFX34074.1| thymidylate synthase [Escherichia coli O157:H7 str. LSU-61]
 gi|323154804|gb|EFZ40998.1| thymidylate synthase [Escherichia coli EPECa14]
 gi|323160030|gb|EFZ45994.1| thymidylate synthase [Escherichia coli E128010]
 gi|323172870|gb|EFZ58501.1| thymidylate synthase [Escherichia coli LT-68]
 gi|323180264|gb|EFZ65816.1| thymidylate synthase [Escherichia coli 1180]
 gi|323183371|gb|EFZ68768.1| thymidylate synthase [Escherichia coli 1357]
 gi|323188757|gb|EFZ74042.1| thymidylate synthase [Escherichia coli RN587/1]
 gi|323377287|gb|ADX49555.1| thymidylate synthase [Escherichia coli KO11]
 gi|323935814|gb|EGB32117.1| thymidylate synthase [Escherichia coli E1520]
 gi|323957433|gb|EGB53155.1| thymidylate synthase [Escherichia coli H263]
 gi|323966808|gb|EGB62239.1| thymidylate synthase [Escherichia coli M863]
 gi|324005631|gb|EGB74850.1| thymidylate synthase [Escherichia coli MS 57-2]
 gi|324011659|gb|EGB80878.1| thymidylate synthase [Escherichia coli MS 60-1]
 gi|324016318|gb|EGB85537.1| thymidylate synthase [Escherichia coli MS 117-3]
 gi|324119867|gb|EGC13746.1| thymidylate synthase [Escherichia coli E1167]
 gi|326339105|gb|EGD62920.1| Thymidylate synthase [Escherichia coli O157:H7 str. 1044]
 gi|326343013|gb|EGD66781.1| Thymidylate synthase [Escherichia coli O157:H7 str. 1125]
 gi|327251574|gb|EGE63260.1| thymidylate synthase [Escherichia coli STEC_7v]
 gi|330908879|gb|EGH37393.1| thymidylate synthase [Escherichia coli AA86]
 gi|331036983|gb|EGI09207.1| thymidylate synthase [Escherichia coli H736]
 gi|331042334|gb|EGI14476.1| thymidylate synthase [Escherichia coli M605]
 gi|331053557|gb|EGI25586.1| thymidylate synthase [Escherichia coli TA206]
 gi|331058320|gb|EGI30301.1| thymidylate synthase [Escherichia coli TA143]
 gi|331063227|gb|EGI35140.1| thymidylate synthase [Escherichia coli TA271]
 gi|331068406|gb|EGI39801.1| thymidylate synthase [Escherichia coli TA280]
 gi|331073635|gb|EGI44956.1| thymidylate synthase [Escherichia coli H591]
 gi|331078085|gb|EGI49291.1| thymidylate synthase [Escherichia coli H299]
 gi|332088662|gb|EGI93775.1| thymidylate synthase [Shigella dysenteriae 155-74]
 gi|332344717|gb|AEE58051.1| thymidylate synthase ThyA [Escherichia coli UMNK88]
 gi|332999582|gb|EGK19167.1| thymidylate synthase [Shigella flexneri VA-6]
          Length = 264

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|283479574|emb|CAY75490.1| thymidylate synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 279

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 16  MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 75

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+S +++ L+
Sbjct: 76  WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 135

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +++MAL PCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 136 SDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 195

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL R PR LP+++I      L 
Sbjct: 196 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 255

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH AI A V++
Sbjct: 256 DYCFDDFEIEGYDPHPAIKAPVAI 279


>gi|226357353|ref|YP_002787093.1| thymidylate synthase [Deinococcus deserti VCD115]
 gi|259550769|sp|C1D070|TYSY_DEIDV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226319343|gb|ACO47339.1| putative thymidylate synthase [Deinococcus deserti VCD115]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV++ G+++ DRTG GT S FG+QMRFDL +GFPL+TTK+ H KS++HELL
Sbjct: 1   MQQYLDFMRHVLEHGTEKTDRTGTGTLSVFGHQMRFDLQEGFPLVTTKRTHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G SNV+YL  HGV+IWDEWAD DGELGP+YGVQWRSWP  DG  IDQI+ +V+ +R
Sbjct: 61  WFLQGSSNVAYLREHGVTIWDEWADPDGELGPVYGVQWRSWPTPDGRHIDQIAQVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  I++MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RTPDSRRLIVSAWNVGEIEQMALPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEFI T GD HLY NH EQA  QL+R PRTLP M +NP++ +L 
Sbjct: 181 YALLTLMVAQVTGLKPGEFIWTGGDCHLYTNHLEQARKQLTREPRTLPVMRLNPDVRELD 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDFTL  Y+PH  I A V+V
Sbjct: 241 GFRFEDFTLEGYDPHPGIKAPVAV 264


>gi|150397222|ref|YP_001327689.1| thymidylate synthase [Sinorhizobium medicae WSM419]
 gi|166231736|sp|A6UB24|TYSY_SINMW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|150028737|gb|ABR60854.1| Thymidylate synthase [Sinorhizobium medicae WSM419]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 183/264 (69%), Positives = 223/264 (84%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HVI+ G+DR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL
Sbjct: 1   MRQYLDLLEHVIETGTDRGDRTGTGTRSVFGYQMRFDLSQGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  HGV IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ L+
Sbjct: 61  WFLKGDTNIAYLKEHGVRIWDEWADENGDLGPVYGYQWRSWPTPDGGHIDQIATLVEGLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN AL+D MALPPCHCLFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 TNPNSRRHIVSAWNPALVDDMALPPCHCLFQFYVADGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NHFEQA LQL+R+P+ LP+M INP + DL 
Sbjct: 181 YALLTMMVAQVTGLEAGDFVHTLGDAHIYRNHFEQAQLQLTRTPKPLPRMEINPAVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFR+EDF L  YE  + I A V+V
Sbjct: 241 SFRFEDFELTGYEADSHIKAPVAV 264


>gi|330831181|ref|YP_004394133.1| Thymidylate synthase [Aeromonas veronii B565]
 gi|328806317|gb|AEB51516.1| Thymidylate synthase [Aeromonas veronii B565]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL
Sbjct: 1   MRAYLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG+VIDQI   V  ++
Sbjct: 61  WFLNGDTNTAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAADGSVIDQIQKAVDDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+F+ T GDVHLY+NH EQ  LQLSR PR LP ++I      + 
Sbjct: 181 YALLTHMMAQQCNLEVGDFVWTGGDVHLYSNHMEQTALQLSREPRPLPTLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+PH  I A V++
Sbjct: 241 DYKFEDFEIEGYDPHPGIKAPVAI 264


>gi|323946537|gb|EGB42561.1| thymidylate synthase [Escherichia coli H120]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHALFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|82778203|ref|YP_404552.1| thymidylate synthase [Shigella dysenteriae Sd197]
 gi|309785137|ref|ZP_07679768.1| thymidylate synthase [Shigella dysenteriae 1617]
 gi|123728515|sp|Q32C94|TYSY_SHIDS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|81242351|gb|ABB63061.1| thymidylate synthetase [Shigella dysenteriae Sd197]
 gi|308926257|gb|EFP71733.1| thymidylate synthase [Shigella dysenteriae 1617]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGNTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|331654309|ref|ZP_08355309.1| thymidylate synthase [Escherichia coli M718]
 gi|331047691|gb|EGI19768.1| thymidylate synthase [Escherichia coli M718]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLRGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|325104763|ref|YP_004274417.1| thymidylate synthase [Pedobacter saltans DSM 12145]
 gi|324973611|gb|ADY52595.1| thymidylate synthase [Pedobacter saltans DSM 12145]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV+  G  + DRTG GT S FGYQMRF+L +GFPLLTTKK+H KS++HEL+
Sbjct: 1   MKQYHDLMQHVLDNGVQKHDRTGTGTISVFGYQMRFNLEEGFPLLTTKKLHLKSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G LGP+YG QWRSWP  DG  IDQIS I+  ++
Sbjct: 61  WFLSGDTNIKYLKENGVRIWDEWADEEGNLGPVYGSQWRSWPTPDGRHIDQISQIISQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I+ MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVAEIENMALPPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+FIHTLGD HLYNNH EQA LQLSR  R LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVCDLKPGDFIHTLGDAHLYNNHLEQAKLQLSRDFRPLPTMRINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 GFKFEDFVLENYDPHPHIKGAVAV 264


>gi|113971196|ref|YP_734989.1| thymidylate synthase [Shewanella sp. MR-4]
 gi|114048434|ref|YP_738984.1| thymidylate synthase [Shewanella sp. MR-7]
 gi|122944477|sp|Q0HSH8|TYSY_SHESR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123029436|sp|Q0HG85|TYSY_SHESM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|113885880|gb|ABI39932.1| thymidylate synthase [Shewanella sp. MR-4]
 gi|113889876|gb|ABI43927.1| thymidylate synthase [Shewanella sp. MR-7]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL
Sbjct: 1   MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + VSIWDEWAD++G+LGP+YG QWRSWP   G+ IDQI+ ++  ++
Sbjct: 61  WFLKGDTNIAYLRDNKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQIAQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPTMTILRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF L +Y+PH  I A V+V
Sbjct: 241 DYQFEDFELTNYDPHPHIKAPVAV 264


>gi|156932697|ref|YP_001436613.1| thymidylate synthase [Cronobacter sakazakii ATCC BAA-894]
 gi|166231698|sp|A7MR31|TYSY_ENTS8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|156530951|gb|ABU75777.1| hypothetical protein ESA_00482 [Cronobacter sakazakii ATCC BAA-894]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+  V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMNKVLHEGAQKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  L+
Sbjct: 61  WFLKGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRSWATPDGRHIDQLETVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEPGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|2258280|gb|AAC45469.1| thymidylate synthase [Neisseria gonorrhoeae]
          Length = 267

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 176/265 (66%), Positives = 213/265 (80%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GT S FGYQMRFDL KGFPLLTTKK+H +S++HELL
Sbjct: 3   MKAYLDLMRHVLDNGTDKSDRTGTGTLSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWD-EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           WFL+GD+N+ YL  + VSIWD EWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ +
Sbjct: 63  WFLKGDTNIKYLKDNNVSIWDDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR IVSAWN AL+D+MALPPCH LFQFYV +G LSCQLYQRS D+FLG+PFNIA
Sbjct: 123 KKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGNLSCQLYQRSADIFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LLTMM+A V G + GEF+HT GD HLY NHFEQA LQL R PR LP M INP + DL
Sbjct: 183 SYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDL 242

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
            +F++EDF L  Y+PH  I A VSV
Sbjct: 243 FAFKFEDFELEGYDPHPHIKAVVSV 267


>gi|15616013|ref|NP_244318.1| thymidylate synthase [Bacillus halodurans C-125]
 gi|25091494|sp|Q9K7B5|TYSY_BACHD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|10176074|dbj|BAB07170.1| thymidylate synthase B [Bacillus halodurans C-125]
          Length = 264

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L RHV++ G++R DRTG GT S FGYQMRFDL +GFP++TTKK+H +S++HELL
Sbjct: 1   MEQYLELCRHVLEHGTERSDRTGTGTISVFGYQMRFDLQEGFPVVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  +GV IW+EWAD++GELGP+YG QWRSW   +G  +DQIS +V++++
Sbjct: 61  WFLKGETNIAYLQENGVRIWNEWADENGELGPVYGKQWRSWEGANGKTVDQISQVVEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A I+ MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HQPDSRRLIVSAWNAAEIEDMALAPCHCLFQFYVQDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + GEF+HT GD H+Y NH EQ  LQL+R PR LP+M +NP +  L 
Sbjct: 181 YALLTKMIAQVCDLEEGEFVHTFGDAHIYLNHIEQVKLQLTREPRPLPEMRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L  Y+PH  I  +VSV
Sbjct: 241 DFTFDDFELVGYDPHPHIKGEVSV 264


>gi|148257348|ref|YP_001241933.1| thymidylate synthase [Bradyrhizobium sp. BTAi1]
 gi|166231692|sp|A5EPD3|TYSY_BRASB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|146409521|gb|ABQ38027.1| thymidylate synthase [Bradyrhizobium sp. BTAi1]
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL  ++  G+++ DRTG GT S FG+QMRF+L  GFPL+TTK++  K++VHELL
Sbjct: 1   MHQYHDLLERILSDGAEKHDRTGTGTLSVFGHQMRFNLGAGFPLVTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI++++  ++
Sbjct: 61  WFLRGDTNIKYLHDHGVTIWDEWADANGDLGPVYGYQWRSWPTPDGGHIDQIANVIDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVVNGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+H+ GDVHLY+NH EQA LQL+R+PR+LP M +NP++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGEFVHSFGDVHLYSNHVEQARLQLTRAPRSLPTMTLNPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF L  Y+PH  I A+V+V
Sbjct: 241 AFRYEDFALAGYDPHPHIKAEVAV 264


>gi|117618975|ref|YP_855217.1| thymidylate synthase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|166231685|sp|A0KG32|TYSY_AERHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|117560382|gb|ABK37330.1| thymidylate synthase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL
Sbjct: 1   MRAYLDLMQKILDEGTVKSDRTGTGTISLFGHQMRFNLAEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG+VIDQI   V  ++
Sbjct: 61  WFLNGDTNTAYLKEHGVSIWDEWADENGDLGPVYGAQWRSWPAADGSVIDQIQKAVDDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+F+ T GDVHLY+NH EQ  LQL+R PR LP ++I      + 
Sbjct: 181 YALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLTREPRPLPTLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+PH  I A V++
Sbjct: 241 DYKFEDFEIEGYDPHPGIKAPVAI 264


>gi|304392191|ref|ZP_07374133.1| thymidylate synthase [Ahrensia sp. R2A130]
 gi|303296420|gb|EFL90778.1| thymidylate synthase [Ahrensia sp. R2A130]
          Length = 272

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 175/264 (66%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G+DR DRTG GTRS FG+QMRFDL+ GFP++TTKK+H +S++ ELL
Sbjct: 9   MRAYLDLLQHILDNGTDRGDRTGTGTRSVFGHQMRFDLADGFPMVTTKKLHLRSIIIELL 68

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G SN++YL  + V IWDEWAD++GELGP+YGVQWRSWP  DG+ IDQI+++++ ++
Sbjct: 69  WFLKGSSNIAYLQDNKVRIWDEWADENGELGPVYGVQWRSWPKSDGSTIDQIANVIEQIK 128

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR +VSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIAS
Sbjct: 129 ANPNSRRLMVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSGDVFLGVPFNIAS 188

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD HLY NHF+QA  QLSR PR LPQM I+P++ D+ 
Sbjct: 189 YALLTMMVAQVTGLKPGEFIHTLGDAHLYANHFDQAREQLSREPRALPQMKIDPSVDDIF 248

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YE F L  Y+PH  I AKV+V
Sbjct: 249 GFEYEHFELTGYDPHPHIAAKVAV 272


>gi|71906233|ref|YP_283820.1| thymidylate synthase [Dechloromonas aromatica RCB]
 gi|123733364|sp|Q47II1|TYSY_DECAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|71845854|gb|AAZ45350.1| thymidylate synthase [Dechloromonas aromatica RCB]
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV+  G+D+ DRTG GTRS FG+QMRFDLS+GFP++TTKK+H KS++HELL
Sbjct: 1   MQPYLDLMRHVLDNGNDKSDRTGTGTRSVFGWQMRFDLSQGFPVMTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  +GV IWDEWAD++G+LGP+YG QWR W   DG VIDQI+ +V SL+
Sbjct: 61  WFIQGDTNIKYLQENGVKIWDEWADENGDLGPVYGKQWRRWETPDGRVIDQITQLVNSLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN   +D MALPPCHCLFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNPGDVDNMALPPCHCLFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+L TMMLA V G+Q GEF+HT GD HLY+NHFEQA LQLSR  R LP M INP + DL 
Sbjct: 181 YALFTMMLAQVCGYQPGEFVHTFGDAHLYSNHFEQAKLQLSRDTRPLPTMWINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  Y+PH  I A V+V
Sbjct: 241 AFRFEDFRLEGYDPHPHIPAPVAV 264


>gi|333000932|gb|EGK20502.1| thymidylate synthase [Shigella flexneri K-272]
 gi|333015566|gb|EGK34905.1| thymidylate synthase [Shigella flexneri K-227]
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YTLLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|194439864|ref|ZP_03071928.1| thymidylate synthase [Escherichia coli 101-1]
 gi|253772319|ref|YP_003035150.1| thymidylate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162755|ref|YP_003045863.1| thymidylate synthase [Escherichia coli B str. REL606]
 gi|297518254|ref|ZP_06936640.1| thymidylate synthase [Escherichia coli OP50]
 gi|300931292|ref|ZP_07146631.1| thymidylate synthase [Escherichia coli MS 187-1]
 gi|194421201|gb|EDX37224.1| thymidylate synthase [Escherichia coli 101-1]
 gi|242378375|emb|CAQ33153.1| thymidylate synthase [Escherichia coli BL21(DE3)]
 gi|253323363|gb|ACT27965.1| thymidylate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974656|gb|ACT40327.1| thymidylate synthase [Escherichia coli B str. REL606]
 gi|253978821|gb|ACT44491.1| thymidylate synthase [Escherichia coli BL21(DE3)]
 gi|300460876|gb|EFK24369.1| thymidylate synthase [Escherichia coli MS 187-1]
 gi|323960730|gb|EGB56353.1| thymidylate synthase [Escherichia coli H489]
 gi|323971644|gb|EGB66874.1| thymidylate synthase [Escherichia coli TA007]
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+PH  I A V++
Sbjct: 241 DYSFEDFEIEGYDPHPGIKAPVAI 264


>gi|157162279|ref|YP_001459597.1| thymidylate synthase [Escherichia coli HS]
 gi|170018930|ref|YP_001723884.1| thymidylate synthase [Escherichia coli ATCC 8739]
 gi|256019377|ref|ZP_05433242.1| thymidylate synthase [Shigella sp. D9]
 gi|312972955|ref|ZP_07787128.1| thymidylate synthase [Escherichia coli 1827-70]
 gi|332280497|ref|ZP_08392910.1| thymidylate synthase [Shigella sp. D9]
 gi|166991229|sp|A8A3W0|TYSY_ECOHS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036933|sp|B1IU17|TYSY_ECOLC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157067959|gb|ABV07214.1| thymidylate synthase [Escherichia coli HS]
 gi|169753858|gb|ACA76557.1| Thymidylate synthase [Escherichia coli ATCC 8739]
 gi|310332897|gb|EFQ00111.1| thymidylate synthase [Escherichia coli 1827-70]
 gi|332102849|gb|EGJ06195.1| thymidylate synthase [Shigella sp. D9]
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGNTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|230780|pdb|2TSC|A Chain A, Structure, Multiple Site Binding, And Segmental
           Accomodation In Thymidylate Synthase On Binding DUMP AND
           An Anti-Folate
 gi|230781|pdb|2TSC|B Chain B, Structure, Multiple Site Binding, And Segmental
           Accomodation In Thymidylate Synthase On Binding DUMP AND
           An Anti-Folate
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRAPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|85714701|ref|ZP_01045688.1| thymidylate synthase [Nitrobacter sp. Nb-311A]
 gi|85698586|gb|EAQ36456.1| thymidylate synthase [Nitrobacter sp. Nb-311A]
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+QY DLL  +++ G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+  +S+VHELL
Sbjct: 1   MNQYHDLLERILREGAEKHDRTGTGTLSVFGHQMRFDLASGFPMLTTKKLPLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  +R
Sbjct: 61  WFLRGETNIKYLKDNGVSIWDEWADENGDLGPVYGSQWRSWPAPDGGSIDQIANVIDMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +DKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G   G+F+H+LGD HLY+NH EQA LQLSR  R LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLSPGDFVHSLGDAHLYSNHLEQARLQLSRPARPLPTMTINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F Y DF L +Y+PH  I A+V+V
Sbjct: 241 AFCYGDFKLENYDPHPHIKAEVAV 264


>gi|270264851|ref|ZP_06193115.1| thymidylate synthetase [Serratia odorifera 4Rx13]
 gi|270041149|gb|EFA14249.1| thymidylate synthetase [Serratia odorifera 4Rx13]
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMNKVLAEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  + VSIWDEWAD+ G+LGP+YG QWR+W   DG  IDQ+S++++ L+
Sbjct: 61  WFLNGDTNVAYLRENNVSIWDEWADEHGDLGPVYGKQWRAWGAADGRQIDQLSNVLKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTRLQLTREPRALPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|146342419|ref|YP_001207467.1| thymidylate synthase [Bradyrhizobium sp. ORS278]
 gi|166231693|sp|A4YZC4|TYSY_BRASO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|146195225|emb|CAL79250.1| Thymidylate synthase (TS) (TSase) [Bradyrhizobium sp. ORS278]
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 216/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL  ++  G+ + DRTG GT S FG+QMRF+L+ GFP++TTK++  K++VHELL
Sbjct: 1   MHQYHDLLERILSDGAQKHDRTGTGTLSVFGHQMRFNLAAGFPMVTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQIS++V  +R
Sbjct: 61  WFLKGDTNIKYLHDHGVTIWDEWADANGDLGPVYGYQWRSWPTSDGGQIDQISNVVDMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+H+ GDVHLY+NH EQA LQLSR+PR LP M +NP++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKLGEFVHSFGDVHLYSNHIEQARLQLSRTPRPLPTMTLNPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF L  Y+PH  I A+V+V
Sbjct: 241 AFRYEDFALAGYDPHPHIKAEVAV 264


>gi|882719|gb|AAB40474.1| thymidylate synthetase [Escherichia coli str. K-12 substr. MG1655]
          Length = 264

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVXDGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|300718158|ref|YP_003742961.1| Thymidylate synthase [Erwinia billingiae Eb661]
 gi|299063994|emb|CAX61114.1| Thymidylate synthase [Erwinia billingiae Eb661]
          Length = 264

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S+VHELL
Sbjct: 1   MKQYLDLMRKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + V+IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+++++Q L+
Sbjct: 61  WFLNGDTNTAYLQENKVTIWDEWADENGDLGPVYGKQWRSWGAADGREIDQLTNVLQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLEQTHLQLTREPRPLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPPIKAPVAI 264


>gi|329119726|ref|ZP_08248406.1| thymidylate synthase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464175|gb|EGF10480.1| thymidylate synthase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 264

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 179/264 (67%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V+  G+D+ DRTG GTRS FG+QMRFDL  GFPLLTTKK+H +S++HELL
Sbjct: 1   MRQYLDLMRRVLDSGTDKSDRTGTGTRSVFGHQMRFDLQDGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YLH + VSIWDEWAD++GELGP+YG QWRSWP  DG  IDQI++++  ++
Sbjct: 61  WFLRGDTNIRYLHENQVSIWDEWADENGELGPVYGYQWRSWPAPDGRHIDQIANVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ANPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM A V G Q GEF+HTLGD HLY NHFEQA LQL+R PRTLP+M +NP + D+ 
Sbjct: 181 YALLTMMAAQVCGLQAGEFVHTLGDAHLYRNHFEQAKLQLTREPRTLPKMTLNPAVRDIS 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++DFTL  Y+PH  I A V+V
Sbjct: 241 AFTFDDFTLTGYDPHPHIKAAVAV 264


>gi|192292373|ref|YP_001992978.1| thymidylate synthase [Rhodopseudomonas palustris TIE-1]
 gi|192286122|gb|ACF02503.1| Thymidylate synthase [Rhodopseudomonas palustris TIE-1]
          Length = 264

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 172/264 (65%), Positives = 216/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  ++  G+++ DRTG GT S FG+QMRFDL+ GFP+LTTK++  K++VHELL
Sbjct: 1   MIQYQDLLERILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGGSIDQIANVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A ++KMALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLMVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEF+HTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ 
Sbjct: 181 YALLTLMVAQVTGLKPGEFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTINPAVNDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDFTL  Y+PH  I A+V+V
Sbjct: 241 GFRYEDFTLTGYDPHPHIKAEVAV 264


>gi|218128749|ref|ZP_03457553.1| hypothetical protein BACEGG_00321 [Bacteroides eggerthii DSM 20697]
 gi|217988977|gb|EEC55293.1| hypothetical protein BACEGG_00321 [Bacteroides eggerthii DSM 20697]
          Length = 264

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  +++++
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH  Q  LQLSR P+ LPQM INP++ ++ 
Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLAQVKLQLSREPKALPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I  KV+V
Sbjct: 241 DFKFEDFELINYDPHPHIAGKVAV 264


>gi|194290285|ref|YP_002006192.1| thymidylate synthase [Cupriavidus taiwanensis LMG 19424]
 gi|193224120|emb|CAQ70129.1| thymidylate synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 283

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL +GFP++TTKK+H KS+++ELL
Sbjct: 20  MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLREGFPVVTTKKLHLKSIIYELL 79

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  HGV+IWDEWAD+ GELGP+YG QWRSWP  DG  IDQI+ +V  +R
Sbjct: 80  WFLQGSTNVRWLQEHGVTIWDEWADEHGELGPVYGSQWRSWPAPDGRHIDQITELVAQIR 139

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWNVA I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 140 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 199

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + G+FI T GD HLYNNHFEQ   QL+R P  LPQ+ I      + 
Sbjct: 200 YALLTHMMAQQTGLEVGDFIWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRRPDSIF 259

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF L  Y+ H AI A V+V
Sbjct: 260 DYRYEDFELAGYQSHPAIKAPVAV 283


>gi|239832277|ref|ZP_04680606.1| thymidylate synthase [Ochrobactrum intermedium LMG 3301]
 gi|239824544|gb|EEQ96112.1| thymidylate synthase [Ochrobactrum intermedium LMG 3301]
          Length = 307

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 174/264 (65%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRF+L +GFP+LTTKK+H +S++HELL
Sbjct: 44  MRTYLDLLQHVLDNGVDRGDRTGTGTRSVFGYQMRFNLEEGFPVLTTKKLHLRSIIHELL 103

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 104 WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 163

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 164 GNPNSRRLIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 223

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HTLGD H+Y NHF+QA  QL+R+P+ LPQM INP++ DL 
Sbjct: 224 YALLTMMIAQVTGLKPGEFVHTLGDAHIYANHFDQAREQLARTPKKLPQMWINPDVKDLF 283

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 284 AFRFEDFRLEGYEADPTIKAPIAV 307


>gi|255691312|ref|ZP_05414987.1| thymidylate synthase [Bacteroides finegoldii DSM 17565]
 gi|260622954|gb|EEX45825.1| thymidylate synthase [Bacteroides finegoldii DSM 17565]
          Length = 264

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 165/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLEDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD +G+LG IYG QWRSWPDY+G  IDQIS  V++++
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISETVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ  LQL+R PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLTREPRPLPQMNINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFKFEDFELVNYDPHPHIAGAVAV 264


>gi|218550075|ref|YP_002383866.1| thymidylate synthase [Escherichia fergusonii ATCC 35469]
 gi|226713170|sp|B7LNI2|TYSY_ESCF3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|218357616|emb|CAQ90255.1| thymidylate synthetase [Escherichia fergusonii ATCC 35469]
 gi|324114883|gb|EGC08849.1| thymidylate synthase [Escherichia fergusonii B253]
 gi|325498403|gb|EGC96262.1| thymidylate synthase [Escherichia fergusonii ECD227]
          Length = 264

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR+LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRSLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|317475464|ref|ZP_07934728.1| thymidylate synthase [Bacteroides eggerthii 1_2_48FAA]
 gi|316908492|gb|EFV30182.1| thymidylate synthase [Bacteroides eggerthii 1_2_48FAA]
          Length = 264

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  +++++
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQLSR P+ LPQM INP++ ++ 
Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPKALPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I  KV+V
Sbjct: 241 DFKFEDFELINYDPHPHIAGKVAV 264


>gi|329957787|ref|ZP_08298262.1| thymidylate synthase [Bacteroides clarus YIT 12056]
 gi|328522664|gb|EGF49773.1| thymidylate synthase [Bacteroides clarus YIT 12056]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQLSR PRTLPQM INP++  + 
Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPRTLPQMRINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YEDF L +Y+PH  I  KV+V
Sbjct: 241 DFTYEDFELVNYDPHPHIAGKVAV 264


>gi|209761048|gb|ACI78836.1| thymidylate synthetase [Escherichia coli]
 gi|320645721|gb|EFX14706.1| thymidylate synthase [Escherichia coli O157:H- str. 493-89]
 gi|320651021|gb|EFX19461.1| thymidylate synthase [Escherichia coli O157:H- str. H 2687]
 gi|332087353|gb|EGI92481.1| thymidylate synthase [Shigella boydii 5216-82]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+   GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWIGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|313206101|ref|YP_004045278.1| thymidylate synthase [Riemerella anatipestifer DSM 15868]
 gi|312445417|gb|ADQ81772.1| thymidylate synthase [Riemerella anatipestifer DSM 15868]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 172/264 (65%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL
Sbjct: 1   MQNYLDLLQHILDHGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ +GVSIWDEWAD +G LGP+YG QWRSW   +G VIDQIS ++  ++
Sbjct: 61  WFLKGDTNIKYLNDNGVSIWDEWADDNGNLGPVYGAQWRSWKGANGKVIDQISEVIHQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A I  MAL PCH LFQFYV +G+LS QLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNAAEIPNMALAPCHALFQFYVADGRLSLQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q GE+IH+ GDVH+YNNHFEQ   QLSR PR LP M +NP++ DL 
Sbjct: 181 YALLTMMVAQVCGLQVGEYIHSFGDVHIYNNHFEQVQKQLSREPRPLPTMKLNPSVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +Y PH+ I A V+V
Sbjct: 241 DFKFEDFTLENYHPHSGIKAPVAV 264


>gi|283835406|ref|ZP_06355147.1| thymidylate synthase [Citrobacter youngae ATCC 29220]
 gi|291068577|gb|EFE06686.1| thymidylate synthase [Citrobacter youngae ATCC 29220]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH +Q  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|295097375|emb|CBK86465.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|157148372|ref|YP_001455691.1| thymidylate synthase [Citrobacter koseri ATCC BAA-895]
 gi|166231695|sp|A8AP42|TYSY_CITK8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157085577|gb|ABV15255.1| hypothetical protein CKO_04194 [Citrobacter koseri ATCC BAA-895]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLREGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + V+IWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVTIWDEWADENGNLGPVYGKQWRAWPAPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|302346549|ref|YP_003814847.1| thymidylate synthase [Prevotella melaninogenica ATCC 25845]
 gi|302150410|gb|ADK96671.1| thymidylate synthase [Prevotella melaninogenica ATCC 25845]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  ++  G+ + DRTG GT S FG+QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLNLLNRILTEGTQKGDRTGTGTLSIFGHQMRFDLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL  HGV IW+EWAD++GELGP+YG QWRSWPDY G  IDQI ++V+ ++
Sbjct: 61  WFLRGDTNVRYLQEHGVRIWNEWADENGELGPVYGHQWRSWPDYKGGTIDQIKNVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A ++ MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPNSRRMLVTAWNPAEVEDMALPPCHCLFQFYVADGRLSLQLYQRSADSFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLLQMIAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+P   I   V+V
Sbjct: 241 DFKYEDFELIGYDPLPHIPGVVAV 264


>gi|319651224|ref|ZP_08005354.1| thymidylate synthase [Bacillus sp. 2_A_57_CT2]
 gi|317397004|gb|EFV77712.1| thymidylate synthase [Bacillus sp. 2_A_57_CT2]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL +HV++ G+ + DRTG GT STFGYQMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLCKHVLENGTKKEDRTGTGTISTFGYQMRFNLQEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW+EWAD++G LGP+YG QWRSW   DGN +DQISS++  ++
Sbjct: 61  WFLNGDTNVKYLQENGVRIWNEWADEEGNLGPVYGHQWRSWTGADGNTVDQISSLIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN   I+KMALPPCHC+FQFY  +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVNAWNAGEIEKMALPPCHCMFQFYAADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEF+HT GDVH+Y NH +Q +LQLSR PR LP+MIINP++ D+ 
Sbjct: 181 YALLTMMVAQVCDLEPGEFVHTFGDVHIYQNHIDQVNLQLSRDPRPLPKMIINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+++DF L  Y PH  I   VSV
Sbjct: 241 SFKFDDFQLEDYNPHPHIKGVVSV 264


>gi|92114690|ref|YP_574618.1| thymidylate synthase [Chromohalobacter salexigens DSM 3043]
 gi|123387366|sp|Q1QUD9|TYSY_CHRSD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91797780|gb|ABE59919.1| thymidylate synthase [Chromohalobacter salexigens DSM 3043]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV++ G ++ DRTG GT S FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MQPYLDLMRHVLENGVEKSDRTGTGTLSVFGHQMRFDLAAGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  + V IWDEWAD++G+LGP+YG QWRSWP  DG  +DQI+++V+ ++
Sbjct: 61  WFLRGDTNIAYLKENRVRIWDEWADENGDLGPVYGYQWRSWPRPDGGHVDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       GEF+HTLGD HLY NH EQA LQLSR PR LP++++NP + D+ 
Sbjct: 181 YALLTHMVAQACDLAPGEFVHTLGDAHLYLNHLEQARLQLSREPRALPRLVLNPRVKDVF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++D  +  Y+PH  I A+V+V
Sbjct: 241 AFTFDDIAIEDYDPHPHIKAEVAV 264


>gi|82545129|ref|YP_409076.1| thymidylate synthase [Shigella boydii Sb227]
 gi|123741947|sp|Q31XG0|TYSY_SHIBS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|81246540|gb|ABB67248.1| thymidylate synthetase [Shigella boydii Sb227]
 gi|320185586|gb|EFW60351.1| Thymidylate synthase [Shigella flexneri CDC 796-83]
 gi|332091971|gb|EGI97049.1| thymidylate synthase [Shigella boydii 3594-74]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y PH  I A V++
Sbjct: 241 DYRFEDFEIEGYAPHPGIKAPVAI 264


>gi|119774004|ref|YP_926744.1| thymidylate synthase [Shewanella amazonensis SB2B]
 gi|166231729|sp|A1S3W8|TYSY_SHEAM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119766504|gb|ABL99074.1| thymidylate synthase [Shewanella amazonensis SB2B]
          Length = 264

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 165/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G+D+ DRTG GTRS FGYQMRFDL++GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKHILDKGTDKSDRTGTGTRSVFGYQMRFDLNEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV YLH + VSIWDEWAD+ G LGP+YG QWRSWP  DG  IDQIS +++ ++
Sbjct: 61  WFLKGETNVDYLHENKVSIWDEWADEKGNLGPVYGAQWRSWPTPDGRHIDQISQVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 ATPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP M I  +   + 
Sbjct: 181 YALLTMMVAQQCNLGLGDFVWTGGDTHLYSNHMEQTQLQLSREPRPLPTMKILRHPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF L  Y+PH  I A V++
Sbjct: 241 DYRFEDFELSGYDPHPHIKAPVAI 264


>gi|154247442|ref|YP_001418400.1| thymidylate synthase [Xanthobacter autotrophicus Py2]
 gi|154161527|gb|ABS68743.1| Thymidylate synthase [Xanthobacter autotrophicus Py2]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLLR ++  G  + DRTG GT S FG+QMRFDL +GFPL+TTKK+H KS+VHELL
Sbjct: 1   MHQYHDLLRRILNEGVRKDDRTGTGTLSVFGHQMRFDLGEGFPLVTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GVSIWDEWAD+ G+LGP+YG QWRSWP  +G VIDQI+ +V  +R
Sbjct: 61  WFLAGDTNVRYLKDNGVSIWDEWADEKGDLGPVYGHQWRSWPTPEGGVIDQIAQVVSDIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A + KMALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPADVSKMALPPCHCLFQFYVLEGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G   G+F+HTLGD HLY NH EQA  QL R+PR LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQVTGLGVGDFVHTLGDAHLYVNHLEQARAQLERTPRALPRLALNPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYED  +  Y+PH AI A V+V
Sbjct: 241 AFRYEDVEIVGYDPHPAIKAPVAV 264


>gi|260911785|ref|ZP_05918357.1| thymidylate synthase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634111|gb|EEX52229.1| thymidylate synthase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ ++  G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLQRIVNEGTRKEDRTGTGTLSVFGHQMRFNLQEGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSWP+Y+G  IDQI SI+ +L+
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYNGGHIDQIQSIINALK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+MALPPCHCLFQFYV  GKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRMIVSAWNVAEVDQMALPPCHCLFQFYVAKGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q G+FIHT GD HLY NH EQA  QL R+PR LP+M+INPN+  + 
Sbjct: 181 YALLTMMMAQVCGLQPGDFIHTTGDTHLYLNHLEQAKEQLKRTPRALPKMVINPNVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+Y++FTL  Y+P   I A+VSV
Sbjct: 241 DFKYDNFTLEGYDPLPHIKAEVSV 264


>gi|255011158|ref|ZP_05283284.1| thymidylate synthase [Bacteroides fragilis 3_1_12]
 gi|313148970|ref|ZP_07811163.1| thymidylate synthase [Bacteroides fragilis 3_1_12]
 gi|313137737|gb|EFR55097.1| thymidylate synthase [Bacteroides fragilis 3_1_12]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRFDL +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLAEGTEKGDRTGTGTISVFGHQMRFDLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD+ G+LG IYG QWRSWP+YDG  IDQIS  V +++
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADEKGDLGHIYGYQWRSWPNYDGGFIDQISEAVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHTLGD H+Y NH EQ  LQLSR PRTLPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGEFIHTLGDAHIYLNHLEQVKLQLSREPRTLPQMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L +Y+PH  I  KV+V
Sbjct: 241 DFRFEDFELVNYDPHPHIAGKVAV 264


>gi|260599168|ref|YP_003211739.1| thymidylate synthase [Cronobacter turicensis z3032]
 gi|260218345|emb|CBA33364.1| Thymidylate synthase [Cronobacter turicensis z3032]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 157/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+  V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMNKVLHEGAQKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + V+IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  L+
Sbjct: 61  WFLKGDTNVAYLHENNVTIWDEWADENGDLGPVYGKQWRSWTAPDGRHIDQLETVINQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL+R PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLEPGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|161761105|pdb|2VET|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q
           Complexed With Dump
 gi|163931137|pdb|3B5B|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q
 gi|163931138|pdb|3B5B|B Chain B, Crystal Structure Of The Thymidylate Synthase K48q
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TT++ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTQRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|311278228|ref|YP_003940459.1| thymidylate synthase [Enterobacter cloacae SCF1]
 gi|308747423|gb|ADO47175.1| thymidylate synthase [Enterobacter cloacae SCF1]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGAQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + V+IWDEWAD+ G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLKGDTNVAYLHENNVTIWDEWADEQGNLGPVYGKQWRAWPTPDGRHIDQITTVINQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCSLEVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|118590864|ref|ZP_01548264.1| thymidylate synthase [Stappia aggregata IAM 12614]
 gi|118436386|gb|EAV43027.1| thymidylate synthase [Stappia aggregata IAM 12614]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G DR DRTG GTRS FG+QMRFDLS+GFP  TTKK+H KS++HELL
Sbjct: 1   MQQYLDLLSKILDEGVDRGDRTGTGTRSIFGHQMRFDLSQGFPCTTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWD+WAD++G+LGP+YG QWRSWP  DG  IDQI+++++ +R
Sbjct: 61  WFLAGDTNIRYLKENGVKIWDDWADENGDLGPVYGYQWRSWPAPDGRSIDQIANLLKMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPESRRLIVSAWNPALVDEMALPPCHSLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HT GD HLY NHF+QA  QL+RSPR LP+M INP + DL 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTFGDAHLYANHFDQAREQLTRSPRPLPEMKINPEVTDLS 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y+P   I A ++V
Sbjct: 241 AFKFEDFELTGYDPLPHIAAPIAV 264


>gi|288927630|ref|ZP_06421477.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330464|gb|EFC69048.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 174/264 (65%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ ++  G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLQRIVNEGTRKEDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSWP+Y+G  +DQI  IV +L+
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYNGGHVDQIQDIVNALK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+MALPPCHCLFQFYV NGKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 NNPDSRRMIVSAWNVAEVDQMALPPCHCLFQFYVANGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHT GD HLY NH EQA  QL R+PRTLP+M+INPN+  + 
Sbjct: 181 YALLTMMMAQVSGLKPGDFIHTTGDTHLYLNHLEQAKEQLKRTPRTLPRMVINPNVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+Y+DFTL  Y+P   I A+VSV
Sbjct: 241 DFKYDDFTLEGYDPLPHIKAEVSV 264


>gi|150010315|ref|YP_001305058.1| thymidylate synthase [Parabacteroides distasonis ATCC 8503]
 gi|256839166|ref|ZP_05544676.1| thymidylate synthase [Parabacteroides sp. D13]
 gi|262382399|ref|ZP_06075536.1| thymidylate synthase [Bacteroides sp. 2_1_33B]
 gi|298374712|ref|ZP_06984670.1| thymidylate synthase [Bacteroides sp. 3_1_19]
 gi|301308397|ref|ZP_07214351.1| thymidylate synthase [Bacteroides sp. 20_3]
 gi|166231722|sp|A6LIC2|TYSY_PARD8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|149938739|gb|ABR45436.1| thymidylate synthase [Parabacteroides distasonis ATCC 8503]
 gi|256740085|gb|EEU53409.1| thymidylate synthase [Parabacteroides sp. D13]
 gi|262295277|gb|EEY83208.1| thymidylate synthase [Bacteroides sp. 2_1_33B]
 gi|298269080|gb|EFI10735.1| thymidylate synthase [Bacteroides sp. 3_1_19]
 gi|300833867|gb|EFK64483.1| thymidylate synthase [Bacteroides sp. 20_3]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLELLNRVLTEGVRKEDRTGTGTISVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  HGV IW+EWAD DG LG IYG QWRSWPDY G  IDQI+  V++++
Sbjct: 61  WFLNGDTNVKYLQDHGVRIWNEWADADGSLGHIYGYQWRSWPDYKGGSIDQITEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G + G+F+HTLGD H+Y+NH EQ  LQL+R PR LP+M INP++  + 
Sbjct: 181 YALLLQMMAQATGLKAGDFVHTLGDAHIYSNHLEQVKLQLTREPRALPRMEINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y+PH  I  +V+V
Sbjct: 241 DFKFEDFNLTGYDPHPHIKGEVAV 264


>gi|157372056|ref|YP_001480045.1| thymidylate synthase [Serratia proteamaculans 568]
 gi|166991231|sp|A8GIH7|TYSY_SERP5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157323820|gb|ABV42917.1| Thymidylate synthase [Serratia proteamaculans 568]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMNKVLAEGTPKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  + VSIWDEWAD++G LGP+YG QWR+W   DG  IDQ+++++  L+
Sbjct: 61  WFLNGDTNVAYLKENKVSIWDEWADENGNLGPVYGKQWRAWGTADGRQIDQLTTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTQLQLTREPRALPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|74318058|ref|YP_315798.1| thymidylate synthase [Thiobacillus denitrificans ATCC 25259]
 gi|123759029|sp|Q3SH96|TYSY_THIDA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|74057553|gb|AAZ97993.1| thymidylate synthase [Thiobacillus denitrificans ATCC 25259]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV++ G+ + DRTG GT S FG+Q R+DL+ GFPL+TTKK H +S+VHELL
Sbjct: 1   MKPYLDLMRHVLEHGTRKDDRTGTGTLSVFGWQTRYDLAAGFPLVTTKKCHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG VIDQI+  V++LR
Sbjct: 61  WFLQGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRSWPKADGGVIDQIAEAVKTLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+MAL PCH  FQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRIIVSAWNVADLDRMALAPCHAFFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+HTLGD HLY NH EQA  QLSR PR LP M +NP++ D+ 
Sbjct: 181 YALLTLMMAQVTGLKPGDFVHTLGDAHLYVNHLEQAREQLSREPRPLPTMTLNPDVTDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDFTL  Y+PH AI A V+V
Sbjct: 241 GFRFEDFTLGGYDPHPAIKAPVAV 264


>gi|311030413|ref|ZP_07708503.1| thymidylate synthase [Bacillus sp. m3-13]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL +H++  G+++ DRTG GT STFGYQMRFDL +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLCKHILHNGTEKEDRTGTGTISTFGYQMRFDLQEGFPLVTTKKLHVKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWRSWP  DG  IDQI+ +++ ++
Sbjct: 61  WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGYQWRSWPTPDGESIDQIAKLIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D MALPPCH +FQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPDSRRLIVSAWNVANVDSMALPPCHTMFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEFIHTLGD H+Y+NH EQ +LQL R P+ LP+M +N  +  + 
Sbjct: 181 YALLTMMVAQVCELEPGEFIHTLGDAHIYSNHIEQVNLQLGREPKKLPKMKLNKEVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDFTL  Y+ H  I   VSV
Sbjct: 241 DFKYEDFTLVDYDAHPHIKGVVSV 264


>gi|24022343|gb|AAN41256.1| mutant thymidilate synthetase [Escherichia coli]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFP +TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPQVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|260591057|ref|ZP_05856515.1| thymidylate synthase [Prevotella veroralis F0319]
 gi|260536922|gb|EEX19539.1| thymidylate synthase [Prevotella veroralis F0319]
          Length = 264

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G  + DRTG GT S FG QMRF+L  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLDLLSRILNEGVHKGDRTGTGTLSVFGNQMRFNLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  HGV IW+EWAD+ G+LGP+YG QWRSWPDY G  IDQI++++  ++
Sbjct: 61  WFLRGDTNIHYLQEHGVRIWNEWADEHGDLGPVYGHQWRSWPDYKGGTIDQITNVLDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPNSRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY+NH EQA LQL+R+PR LP+M INP++ DL 
Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYSNHLEQAKLQLTRTPRPLPKMKINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+YEDF L  Y P+  I A+V+V
Sbjct: 241 AFKYEDFELVDYNPYPHISAEVAV 264


>gi|315022907|gb|EFT35930.1| Thymidylate synthase [Riemerella anatipestifer RA-YM]
 gi|325336455|gb|ADZ12729.1| Thymidylate synthase [Riemerella anatipestifer RA-GD]
          Length = 264

 Score =  401 bits (1030), Expect = e-110,   Method: Composition-based stats.
 Identities = 172/264 (65%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G+D+ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL
Sbjct: 1   MQNYLDLLQHILDHGTDKTDRTGTGTRSVFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ +GVSIWDEWAD +G LGP+YG QWRSW   +G VIDQIS ++  ++
Sbjct: 61  WFLKGDTNIKYLNDNGVSIWDEWADDNGNLGPVYGAQWRSWKGANGKVIDQISEVIHQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A I  MAL PCH LFQFYV +G+LS QLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNAAEIPNMALAPCHALFQFYVADGRLSLQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q GE+IH+ GDVH+YNNHFEQ   QLSR PR LP M +NP++ DL 
Sbjct: 181 YTLLTMMVAQVCGLQVGEYIHSFGDVHIYNNHFEQVQKQLSREPRPLPTMKLNPSVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +Y PH+ I A V+V
Sbjct: 241 DFKFEDFTLENYHPHSGIKAPVAV 264


>gi|308187979|ref|YP_003932110.1| thymidylate synthetase [Pantoea vagans C9-1]
 gi|308058489|gb|ADO10661.1| thymidylate synthetase [Pantoea vagans C9-1]
          Length = 264

 Score =  401 bits (1030), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMQHVLHEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSW    G  IDQ+S +++ L+
Sbjct: 61  WFLKGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRSWGTASGQEIDQLSQVMEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  + +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RDPDSRRIIVSAWNVGELSEMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQA LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQARLQLTREPRPLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH AI A V++
Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAI 264


>gi|327402847|ref|YP_004343685.1| thymidylate synthase [Fluviicola taffensis DSM 16823]
 gi|327318355|gb|AEA42847.1| thymidylate synthase [Fluviicola taffensis DSM 16823]
          Length = 264

 Score =  401 bits (1030), Expect = e-110,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+H++  G+ + DRTG GT STFGYQMR++L +GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYHDLLQHILDKGTFKGDRTGTGTLSTFGYQMRYNLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQIS+++  ++
Sbjct: 61  WFLQGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPTPDGGSIDQISNLIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNVA +D MALPPCH +FQFYV +GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 121 KNPNSRRLIVNAWNVAYVDNMALPPCHTMFQFYVADGKLSCQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEFIHTLGD HLY+NH +QA LQL R  R LP M INP + D+ 
Sbjct: 181 YALLTMMIAQVCDLKPGEFIHTLGDAHLYSNHLDQAKLQLERDFRPLPTMKINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y+PH  I A ++V
Sbjct: 241 GFKYEDFELLNYDPHPTIKAPIAV 264


>gi|255535905|ref|YP_003096276.1| Thymidylate synthase [Flavobacteriaceae bacterium 3519-10]
 gi|255342101|gb|ACU08214.1| Thymidylate synthase [Flavobacteriaceae bacterium 3519-10]
          Length = 302

 Score =  401 bits (1030), Expect = e-110,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+++I  G+++ DRTG GTRS FGYQ+R+DLSKGFPL+TTKKVH KS+++ELL
Sbjct: 39  MQNYLDLLQNIIDNGTNKTDRTGTGTRSIFGYQLRYDLSKGFPLVTTKKVHLKSIIYELL 98

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIW+EWAD++G+LGP+YGVQWRSW   DG V+DQIS ++  ++
Sbjct: 99  WFLKGDTNIKYLADNGVSIWNEWADENGDLGPVYGVQWRSWNGADGKVVDQISDVIDQIK 158

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV+ I  MAL PCH LFQFYV +GKLS QLYQRS DVFLG+PFNIAS
Sbjct: 159 KNPDSRRLIVSAWNVSEIPNMALAPCHALFQFYVADGKLSLQLYQRSADVFLGVPFNIAS 218

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V   + G+++HT GDVH+YNNHFEQ + QLSR+P+ LP M +NP I D+ 
Sbjct: 219 YALLLMMVAQVCELEVGDYVHTFGDVHIYNNHFEQVNKQLSRTPKPLPVMKLNPEIKDIF 278

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF +EDFTL +Y+P+  I A V+V
Sbjct: 279 SFNFEDFTLENYDPYPGIKAPVAV 302


>gi|329961539|ref|ZP_08299620.1| thymidylate synthase [Bacteroides fluxus YIT 12057]
 gi|328531751|gb|EGF58580.1| thymidylate synthase [Bacteroides fluxus YIT 12057]
          Length = 264

 Score =  401 bits (1030), Expect = e-110,   Method: Composition-based stats.
 Identities = 165/264 (62%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNMEEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLKGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NGKLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ  LQL+R PR LPQM INP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLTREPRALPQMQINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y PH  I  KV+V
Sbjct: 241 DFKFEDFELVNYNPHPHIAGKVAV 264


>gi|291296233|ref|YP_003507631.1| thymidylate synthase [Meiothermus ruber DSM 1279]
 gi|290471192|gb|ADD28611.1| thymidylate synthase [Meiothermus ruber DSM 1279]
          Length = 264

 Score =  401 bits (1030), Expect = e-110,   Method: Composition-based stats.
 Identities = 172/264 (65%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+RHV++ G D+ DRTGVGTRS FGYQMRFDL +GFPL+TTKKVHWKSVV+ELL
Sbjct: 1   MQQYHDLMRHVLEHGVDKSDRTGVGTRSVFGYQMRFDLRQGFPLVTTKKVHWKSVVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ +L  +GV+IWDEWAD+ GELGP+YG QWRSW   DG  IDQ++ +++ +R
Sbjct: 61  WFLRGETNIGFLRENGVTIWDEWADEAGELGPVYGKQWRSWAGPDGQTIDQLAWVLEEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + +MAL PCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVADLPQMALAPCHILFQFYVAQGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + GE IHTLGD HLY NHFEQA LQLSR PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQVTGLEPGELIHTLGDAHLYRNHFEQARLQLSREPRPLPTLRLNPAVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F Y+D  L +Y PH  I A V+V
Sbjct: 241 AFTYDDIELLNYNPHPRIPAPVAV 264


>gi|24372913|ref|NP_716955.1| thymidylate synthase [Shewanella oneidensis MR-1]
 gi|32171834|sp|Q8EH94|TYSY_SHEON RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|24347042|gb|AAN54400.1|AE015577_10 thymidylate synthase [Shewanella oneidensis MR-1]
          Length = 264

 Score =  401 bits (1030), Expect = e-110,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL
Sbjct: 1   MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + VSIWDEWAD++G+LGP+YG QWRSWP   G  IDQIS ++  ++
Sbjct: 61  WFLKGDTNIAYLRDNKVSIWDEWADENGDLGPVYGAQWRSWPTQSGEAIDQISQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPTMTILRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L +Y+PH  I A V+V
Sbjct: 241 DYQFDDFALSNYDPHPHIKAPVAV 264


>gi|307945915|ref|ZP_07661251.1| thymidylate synthase [Roseibium sp. TrichSKD4]
 gi|307771788|gb|EFO31013.1| thymidylate synthase [Roseibium sp. TrichSKD4]
          Length = 264

 Score =  400 bits (1029), Expect = e-110,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G DR DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYLDLMQKVLDEGVDRGDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IWD+WAD++GELGP+YG QWRSWP  DG  IDQI +++  ++
Sbjct: 61  WFLSGDTNVRYLQENGVKIWDDWADENGELGPVYGYQWRSWPAPDGRSIDQIENLLTMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ANPESRRLIVSAWNPALVDEMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+H+ GD H+Y+NHF+Q   QL R+PR LP M +NPN+ DL 
Sbjct: 181 YALLTMMIAQVTGLKSGDFVHSFGDAHIYHNHFDQVREQLIRTPRALPTMTLNPNVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+YEDF L  Y PH  I A ++V
Sbjct: 241 AFKYEDFELTDYNPHPHIKAPIAV 264


>gi|37524624|ref|NP_927968.1| thymidylate synthase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|62901350|sp|Q7N8U4|TYSY_PHOLL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|36784049|emb|CAE12918.1| Thymidylate synthase (TS) (TSase) [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 264

 Score =  400 bits (1029), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMTRVLAEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YLH +GV+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+ ++++ L+
Sbjct: 61  WFLNGDTNIKYLHENGVTIWDEWADENGDLGPVYGKQWRAWGTADGRQIDQLKTVLEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR+LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTKLQLSREPRSLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH  I A V++
Sbjct: 241 DYKFDDFEIVDYDPHPGIKAPVAI 264


>gi|325293415|ref|YP_004279279.1| Thymidylate synthase [Agrobacterium sp. H13-3]
 gi|325061268|gb|ADY64959.1| Thymidylate synthase [Agrobacterium sp. H13-3]
          Length = 264

 Score =  400 bits (1029), Expect = e-110,   Method: Composition-based stats.
 Identities = 177/264 (67%), Positives = 226/264 (85%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV+  GSDR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLRHVMDTGSDRGDRTGTGTRSVFGYQMRFDLAEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+ ++++L+
Sbjct: 61  WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIALLIEALK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+HTLGD H+Y NHFEQA LQ++R+P+ LP M +NP++ DL 
Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHIYANHFEQAKLQMTRTPKALPTMRLNPDVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDFTL +YE  + I A ++V
Sbjct: 241 SFKFEDFTLENYEADSTIKAPIAV 264


>gi|222149084|ref|YP_002550041.1| thymidylate synthase [Agrobacterium vitis S4]
 gi|254790228|sp|B9JXQ5|TYSY_AGRVS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|221736069|gb|ACM37032.1| thymidylate synthase [Agrobacterium vitis S4]
          Length = 264

 Score =  400 bits (1029), Expect = e-110,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 221/264 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV++ GSDR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLQHVMENGSDRGDRTGTGTRSVFGYQMRFDLAQGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GVSIWDEWAD++G+LGP+YG QWRSWP   G  IDQI+++V+S++
Sbjct: 61  WFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPKPGGGHIDQIANLVESIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY NHFEQA LQL+R P+ LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKAGDFIHTLGDAHLYANHFEQARLQLTRQPKPLPVMRINPDVKDVF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF+L +Y     I A ++V
Sbjct: 241 GFAFEDFSLENYSADPVIKAPIAV 264


>gi|24114106|ref|NP_708616.1| thymidylate synthase [Shigella flexneri 2a str. 301]
 gi|30064168|ref|NP_838339.1| thymidylate synthase [Shigella flexneri 2a str. 2457T]
 gi|110806763|ref|YP_690283.1| thymidylate synthase [Shigella flexneri 5 str. 8401]
 gi|27735263|sp|P48464|TYSY_SHIFL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123146739|sp|Q0T137|TYSY_SHIF8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|24053240|gb|AAN44323.1| thymidylate synthetase [Shigella flexneri 2a str. 301]
 gi|30042425|gb|AAP18149.1| thymidylate synthetase [Shigella flexneri 2a str. 2457T]
 gi|110616311|gb|ABF04978.1| thymidylate synthetase [Shigella flexneri 5 str. 8401]
 gi|313647891|gb|EFS12337.1| thymidylate synthase [Shigella flexneri 2a str. 2457T]
 gi|332753548|gb|EGJ83928.1| thymidylate synthase [Shigella flexneri 4343-70]
 gi|332753684|gb|EGJ84063.1| thymidylate synthase [Shigella flexneri K-671]
 gi|332754710|gb|EGJ85076.1| thymidylate synthase [Shigella flexneri 2747-71]
 gi|332999926|gb|EGK19509.1| thymidylate synthase [Shigella flexneri K-218]
 gi|333015044|gb|EGK34387.1| thymidylate synthase [Shigella flexneri K-304]
          Length = 264

 Score =  400 bits (1029), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  + A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGVKAPVAI 264


>gi|16766303|ref|NP_461918.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56414948|ref|YP_152023.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62181510|ref|YP_217927.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161615936|ref|YP_001589901.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167550126|ref|ZP_02343883.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167993498|ref|ZP_02574592.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168231096|ref|ZP_02656154.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168236052|ref|ZP_02661110.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168242768|ref|ZP_02667700.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168463843|ref|ZP_02697760.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168820273|ref|ZP_02832273.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194444087|ref|YP_002042250.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194448836|ref|YP_002046971.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194469951|ref|ZP_03075935.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194735179|ref|YP_002115951.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197248114|ref|YP_002147910.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197261701|ref|ZP_03161775.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197363876|ref|YP_002143513.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198243101|ref|YP_002216974.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|204928268|ref|ZP_03219468.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205353941|ref|YP_002227742.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207858264|ref|YP_002244915.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|238909779|ref|ZP_04653616.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|20455351|sp|Q8ZMA9|TYSY_SALTY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901208|sp|Q5PEN6|TYSY_SALPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|75505581|sp|Q57KB6|TYSY_SALCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036942|sp|A9N2L7|TYSY_SALPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|16421551|gb|AAL21877.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56129205|gb|AAV78711.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62129143|gb|AAX66846.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161365300|gb|ABX69068.1| hypothetical protein SPAB_03733 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402750|gb|ACF62972.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194407140|gb|ACF67359.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194456315|gb|EDX45154.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194710681|gb|ACF89902.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195633626|gb|EDX52040.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197095353|emb|CAR60911.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197211817|gb|ACH49214.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197239956|gb|EDY22576.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197290918|gb|EDY30272.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197937617|gb|ACH74950.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|204322590|gb|EDZ07787.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205273722|emb|CAR38715.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205324734|gb|EDZ12573.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205328467|gb|EDZ15231.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205334514|gb|EDZ21278.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205338222|gb|EDZ24986.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205342942|gb|EDZ29706.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|206710067|emb|CAR34422.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261248135|emb|CBG25970.1| TS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267995141|gb|ACY90026.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301159559|emb|CBW19078.1| Thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312914020|dbj|BAJ37994.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320087427|emb|CBY97192.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321225677|gb|EFX50731.1| Thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|322613402|gb|EFY10343.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322620994|gb|EFY17852.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322624057|gb|EFY20891.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628203|gb|EFY24992.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633322|gb|EFY30064.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636100|gb|EFY32808.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322648813|gb|EFY45260.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655194|gb|EFY51504.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322657975|gb|EFY54243.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664077|gb|EFY60276.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322667045|gb|EFY63217.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673095|gb|EFY69202.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677915|gb|EFY73978.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322681090|gb|EFY77123.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322685686|gb|EFY81680.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322715992|gb|EFZ07563.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323131357|gb|ADX18787.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323194825|gb|EFZ80012.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323196576|gb|EFZ81724.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323205011|gb|EFZ89994.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207788|gb|EFZ92734.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212660|gb|EFZ97477.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214857|gb|EFZ99605.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323230655|gb|EGA14773.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323234995|gb|EGA19081.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323239033|gb|EGA23083.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323244609|gb|EGA28615.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323247224|gb|EGA31190.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323256400|gb|EGA40136.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323262424|gb|EGA45980.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323267480|gb|EGA50964.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323269116|gb|EGA52571.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326624741|gb|EGE31086.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326629055|gb|EGE35398.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332989869|gb|AEF08852.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 264

 Score =  400 bits (1029), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|226939715|ref|YP_002794788.1| thymidylate synthase [Laribacter hongkongensis HLHK9]
 gi|254790240|sp|C1D4I5|TYSY_LARHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226714641|gb|ACO73779.1| TysY [Laribacter hongkongensis HLHK9]
          Length = 264

 Score =  400 bits (1029), Expect = e-110,   Method: Composition-based stats.
 Identities = 180/264 (68%), Positives = 216/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L++HV+  G+D+ DRTG GTRS FGYQMRFDL++GFPLLTTKK+H +S+VHELL
Sbjct: 1   MKAYLELMQHVLDHGTDKADRTGTGTRSVFGYQMRFDLAQGFPLLTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G+LGP+YG QWRSWP  DG  IDQIS ++  +R
Sbjct: 61  WFLAGDTNIRYLKDNGVRIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQISGLLDMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPALVDDMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G Q GEF+HT GD HLY+NHFEQA LQL R PR LP M +NP + DL 
Sbjct: 181 YALLTLMVAQVTGLQPGEFVHTFGDAHLYSNHFEQARLQLQREPRALPVMKLNPVVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDFTL  Y+PH  I A+VSV
Sbjct: 241 AFRFEDFTLEGYDPHPHIKAEVSV 264


>gi|296104486|ref|YP_003614632.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295058945|gb|ADF63683.1| thymidylate synthase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 264

 Score =  400 bits (1029), Expect = e-110,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|29347457|ref|NP_810960.1| thymidylate synthase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253570671|ref|ZP_04848079.1| thymidylate synthase [Bacteroides sp. 1_1_6]
 gi|298385085|ref|ZP_06994644.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|62901371|sp|Q8A639|TYSY_BACTN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|29339357|gb|AAO77154.1| thymidylate synthase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251839620|gb|EES67703.1| thymidylate synthase [Bacteroides sp. 1_1_6]
 gi|298262229|gb|EFI05094.1| thymidylate synthase [Bacteroides sp. 1_1_14]
          Length = 264

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N  YL  HGV IW+EWAD++G+LG IYG QWRSWPDYDG  IDQIS  V++++
Sbjct: 61  WFLQGDTNAKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYDGGFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +  M LPPCH  FQFYV +G+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLKNMNLPPCHAFFQFYVADGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHTLGD H+Y NH +Q  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGEFIHTLGDAHIYLNHLDQVKLQLSREPRALPQMKINPDVKSIY 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I   V+V
Sbjct: 241 DFQFEDFELVNYDPHPHIAGIVAV 264


>gi|168261848|ref|ZP_02683821.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|205349106|gb|EDZ35737.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 264

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLMHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|159185026|ref|NP_355015.2| thymidylate synthase [Agrobacterium tumefaciens str. C58]
 gi|22096221|sp|Q8UDS3|TYSY_AGRT5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|159140300|gb|AAK87800.2| thymidylate synthase [Agrobacterium tumefaciens str. C58]
          Length = 264

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 227/264 (85%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV++ GSDR DRTG GTRS FGYQMRFDLS+GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLRHVMETGSDRGDRTGTGTRSVFGYQMRFDLSEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+ ++++L+
Sbjct: 61  WFLNGDTNIAYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIALLIEALK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V+G + G+F+HTLGD H+Y NHFEQA LQ++R+P+ LP M +NP++ +L 
Sbjct: 181 YALLTLMVAQVVGLKPGDFVHTLGDAHIYANHFEQAQLQMTRTPKALPTMRLNPDVKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +YE  ++I A ++V
Sbjct: 241 GFKFEDFTLENYEADSSIKAPIAV 264


>gi|91977820|ref|YP_570479.1| thymidylate synthase [Rhodopseudomonas palustris BisB5]
 gi|123735257|sp|Q134B1|TYSY_RHOPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91684276|gb|ABE40578.1| thymidylate synthase [Rhodopseudomonas palustris BisB5]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  ++  G+++ DRTG GT S FG+QMRF+L+ GFP+LTTK++  K++VHELL
Sbjct: 1   MIQYHDLLERILSDGTEKHDRTGTGTLSVFGHQMRFNLAAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI++IV+ ++
Sbjct: 61  WFLQGDTNIKYLRDNGVTIWDEWADANGDLGPVYGAQWRSWPAADGRSIDQIANIVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A +D+MALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPADVDRMALPPCHCLFQFYVAGGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD HLY+NH EQA LQL+R+PR LP+M+I+P + D+ 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHLYSNHLEQARLQLTRAPRALPEMVIDPAVKDVF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDFTL+ Y+PH  I A+V+V
Sbjct: 241 GFRYEDFTLQGYDPHPHIKAEVAV 264


>gi|312964897|ref|ZP_07779137.1| thymidylate synthase [Escherichia coli 2362-75]
 gi|312290453|gb|EFR18333.1| thymidylate synthase [Escherichia coli 2362-75]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLS  PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSCEPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|30352180|gb|AAP31579.1| thymidylate synthase [Shigella flexneri]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 151/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH + V+IWD+WAD++G+LGP++G QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIGYLHENNVTIWDDWADENGDLGPVFGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YTLLVHMMAQQCDLEVGDFVWTGGDTHLYTNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|163852080|ref|YP_001640123.1| thymidylate synthase [Methylobacterium extorquens PA1]
 gi|163663685|gb|ABY31052.1| Thymidylate synthase [Methylobacterium extorquens PA1]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL
Sbjct: 1   MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GV+IWDEWAD +G+LGP+YG QWRSW   DG  +DQI+ I+  + 
Sbjct: 61  WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGGTVDQIAWILDEIA 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV NG+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVANGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY NH EQ  LQLSR PR LP++ +NP +  L 
Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  YEPH AI A V+V
Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264


>gi|187731322|ref|YP_001881432.1| thymidylate synthase [Shigella boydii CDC 3083-94]
 gi|187428314|gb|ACD07588.1| thymidylate synthase [Shigella boydii CDC 3083-94]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  D   IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDRRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|317130117|ref|YP_004096399.1| thymidylate synthase [Bacillus cellulosilyticus DSM 2522]
 gi|315475065|gb|ADU31668.1| thymidylate synthase [Bacillus cellulosilyticus DSM 2522]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 157/264 (59%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL +H+++ G+++ DRTG GT STFGYQMRF+L+ GFP+LTTKK+  ++++HELL
Sbjct: 1   MRQYHDLCKHILENGTEKTDRTGTGTISTFGYQMRFNLNDGFPVLTTKKLALRAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  + V IW+EWAD++G+LGP+YG QWRSWP   G  IDQ+ ++++ ++
Sbjct: 61  WFIKGDTNIRYLQENNVRIWNEWADENGDLGPVYGKQWRSWPTPSGETIDQLGNVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWNVA +DKMAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPDSRRLVVNAWNVADLDKMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G  YG+F+HT GDVH+Y NH EQ +LQL+R PR LP M +NP +  + 
Sbjct: 181 YALLTMMIARECGLDYGDFVHTFGDVHIYKNHIEQVNLQLTRDPRPLPTMKLNPEVKRIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+ EDF L  Y+PH  I  +VSV
Sbjct: 241 DFKIEDFELVGYDPHPHIKGEVSV 264


>gi|154252890|ref|YP_001413714.1| thymidylate synthase [Parvibaculum lavamentivorans DS-1]
 gi|171769615|sp|A7HVX4|TYSY_PARL1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|154156840|gb|ABS64057.1| Thymidylate synthase [Parvibaculum lavamentivorans DS-1]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 174/264 (65%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R     G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H KS++HELL
Sbjct: 1   MQQYLDLMRLARDTGVTKTDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ GD+N  YL  +GVSIWD+WAD++GELGP+YG QWRSWP  DG  IDQI ++V+ ++
Sbjct: 61  WFIAGDTNTRYLKANGVSIWDDWADENGELGPVYGHQWRSWPTPDGGKIDQIRNLVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D MALPPCHCLFQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVADVDSMALPPCHCLFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLY NH EQAD QL+R P+ LP M INP++  L 
Sbjct: 181 YALLTMMVAQVTGLKPGEFIHTFGDAHLYLNHLEQADKQLAREPKKLPVMHINPDVKSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y+DFTL  YE H  I A V+V
Sbjct: 241 DFTYDDFTLEGYEAHPHISAPVAV 264


>gi|200387449|ref|ZP_03214061.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|199604547|gb|EDZ03092.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWSTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|298293052|ref|YP_003694991.1| thymidylate synthase [Starkeya novella DSM 506]
 gi|296929563|gb|ADH90372.1| thymidylate synthase [Starkeya novella DSM 506]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +LL  V++ G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK+H +S++HELL
Sbjct: 1   MRQYHELLERVLREGTRKDDRTGTGTLSLFGHQMRFDLAEGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  +GVSIWDEWAD +G+LGP+YG QWRSWPD  G VIDQI+ ++  +R
Sbjct: 61  WFLAGDTNIAYLKENGVSIWDEWADANGDLGPVYGHQWRSWPDGRGGVIDQIAQVLSDIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A + +MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADVPQMALPPCHCLFQFYVLDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HTLGD HLY NH EQA  QLSR+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQVTGLKPGDFVHTLGDAHLYVNHVEQAHEQLSRAPRKLPALKLNPAVDDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|253998589|ref|YP_003050652.1| thymidylate synthase [Methylovorus sp. SIP3-4]
 gi|253985268|gb|ACT50125.1| thymidylate synthase [Methylovorus sp. SIP3-4]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 168/264 (63%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G  + DRTG GT S FGYQMRFDL+ GFPLLTTKKVH KS++HELL
Sbjct: 1   MQTYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAAGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV+IWDEWAD +G LGP+YG QWR+WP  DG+ IDQI+ +V++++
Sbjct: 61  WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGSHIDQITQVVEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ   QLSR+PR+LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYLNHMEQVKEQLSRTPRSLPTMQINPDVRDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF+L++Y+P+  I A V+V
Sbjct: 241 AFRYEDFSLQNYDPYPPIKAPVAV 264


>gi|240139408|ref|YP_002963883.1| thymidylate synthetase [Methylobacterium extorquens AM1]
 gi|240009380|gb|ACS40606.1| thymidylate synthetase [Methylobacterium extorquens AM1]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL
Sbjct: 1   MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GV+IWDEWAD +G+LGP+YG QWRSW   DG  +DQI+ I+  + 
Sbjct: 61  WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGGTVDQIAWILDEIA 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY NH EQ  LQLSR PR LP++ +NP +  L 
Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  YEPH AI A V+V
Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264


>gi|298370125|ref|ZP_06981441.1| thymidylate synthase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281585|gb|EFI23074.1| thymidylate synthase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 174/264 (65%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G D+ DRTG GTRS FGYQMRFDLSKGFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYHDLMRHVLEHGIDKSDRTGTGTRSVFGYQMRFDLSKGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++ + ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVTEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHTMFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEFIHT GD HLY+NH EQA LQLSR  R LP+M INP + DL 
Sbjct: 181 YALLTMMMAQVCRLKIGEFIHTFGDAHLYSNHMEQAKLQLSRDFRPLPEMKINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F++EDF L  Y PH  I A+V+V
Sbjct: 241 AFKFEDFELTGYNPHPHIKAEVAV 264


>gi|92118240|ref|YP_577969.1| thymidylate synthase [Nitrobacter hamburgensis X14]
 gi|123265118|sp|Q1QJT8|TYSY_NITHX RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91801134|gb|ABE63509.1| thymidylate synthase [Nitrobacter hamburgensis X14]
          Length = 264

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+QY DLL  ++  G+++ DRTG GT S FG+QMRF+L+ GFP+LTTKK+  KS+VHELL
Sbjct: 1   MNQYHDLLERILSDGAEKHDRTGTGTLSIFGHQMRFNLASGFPMLTTKKLPLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV YL  HGVSIWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+++V  + 
Sbjct: 61  WFLKGETNVRYLREHGVSIWDEWADANGDLGPVYGSQWRSWPAPDGRSIDQIANVVDMIG 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A +DKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RSPDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+H+LGD HLY NH +QA LQL+R  R+LP M INP +  + 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHSLGDAHLYLNHLDQARLQLTRPTRSLPTMTINPEVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF L +Y+PH  I A+V+V
Sbjct: 241 AFRYEDFKLENYDPHPHIKAEVAV 264


>gi|2098345|pdb|1KCE|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|2098346|pdb|1KCE|B Chain B, E. Coli Thymidylate Synthase Mutant E58q In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|2392565|pdb|1TLS|A Chain A, Thymidylate Synthase Ternary Complex With Fdump And
           Methylenetetrahydrofolate
 gi|2392566|pdb|1TLS|B Chain B, Thymidylate Synthase Ternary Complex With Fdump And
           Methylenetetrahydrofolate
 gi|9257011|pdb|1F4B|A Chain A, Crystal Structure Of Escherichia Coli Thymidylate Synthase
 gi|9257012|pdb|1F4C|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase
           Covalently Modified At C146 With
           N-[tosyl-D-Prolinyl]amino- Ethanethiol
 gi|9257013|pdb|1F4C|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase
           Covalently Modified At C146 With
           N-[tosyl-D-Prolinyl]amino- Ethanethiol
 gi|9257016|pdb|1F4E|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase
           Complexed With Tosyl-D-Proline
 gi|9257017|pdb|1F4F|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase
           Complexed With Sp-722
 gi|9257018|pdb|1F4F|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase
           Complexed With Sp-722
 gi|15988332|pdb|1JTQ|A Chain A, E. Coli Ts Complex With Dump And The Pyrrolo(2,3-D)
           Pyrimidine-Based Antifolate Ly341770
 gi|15988333|pdb|1JTQ|B Chain B, E. Coli Ts Complex With Dump And The Pyrrolo(2,3-D)
           Pyrimidine-Based Antifolate Ly341770
 gi|15988334|pdb|1JTU|A Chain A, E. Coli Thymidylate Synthase In A Complex With Dump And
           Ly338913, A Polyglutamylated Pyrrolo(2,3-D)pyrimidine-
           Based Antifolate
 gi|15988335|pdb|1JTU|B Chain B, E. Coli Thymidylate Synthase In A Complex With Dump And
           Ly338913, A Polyglutamylated Pyrrolo(2,3-D)pyrimidine-
           Based Antifolate
 gi|15988346|pdb|1JUT|A Chain A, E. Coli Thymidylate Synthase Bound To Dump And Ly338529, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988347|pdb|1JUT|B Chain B, E. Coli Thymidylate Synthase Bound To Dump And Ly338529, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|21730588|pdb|1KZI|A Chain A, Crystal Structure Of EctsDUMPTHF COMPLEX
 gi|21730589|pdb|1KZI|B Chain B, Crystal Structure Of EctsDUMPTHF COMPLEX
 gi|82407729|pdb|2A9W|A Chain A, E. Coli Ts Complexed With Dump And Inhibitor Ga9
 gi|82407730|pdb|2A9W|B Chain B, E. Coli Ts Complexed With Dump And Inhibitor Ga9
 gi|82407731|pdb|2A9W|C Chain C, E. Coli Ts Complexed With Dump And Inhibitor Ga9
 gi|82407732|pdb|2A9W|D Chain D, E. Coli Ts Complexed With Dump And Inhibitor Ga9
 gi|93279929|pdb|2G8O|A Chain A, High Resolution Structure Of Escherichia Coli Thymidylate
           Synthase Ternary Complex With Dump And A Cofactor
           Analog, Cb3717
 gi|93279930|pdb|2G8O|B Chain B, High Resolution Structure Of Escherichia Coli Thymidylate
           Synthase Ternary Complex With Dump And A Cofactor
           Analog, Cb3717
 gi|99032326|pdb|2FTQ|A Chain A, E. Coli Thymidylate Synthase At 1.8 A Resolution
 gi|157834019|pdb|1TSN|A Chain A, Thymidylate Synthase Ternary Complex With Fdump And
           Methylenetetrahydrofolate
 gi|215261129|pdb|3B9H|A Chain A, E. Coli Thymidylate Synthase Complexed With 5-Nitro-2'-
           Deoxy Uridine
 gi|215794590|pdb|3BHL|A Chain A, E.Coli Thymidylate Synthase Complexes With 5-No2dump And
           Tetrahydrofolate At 1.4 A Resolution
 gi|215794591|pdb|3BHL|B Chain B, E.Coli Thymidylate Synthase Complexes With 5-No2dump And
           Tetrahydrofolate At 1.4 A Resolution
 gi|215794592|pdb|3BHR|A Chain A, E. Coli Ts Complexed With 5-No2dump And Tetrahydrofolate
           At 1.9 A Resolution (Space Group 152)
          Length = 264

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 152/263 (57%), Positives = 200/263 (76%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|16761778|ref|NP_457395.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29143262|ref|NP_806604.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213051490|ref|ZP_03344368.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213579810|ref|ZP_03361636.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213622588|ref|ZP_03375371.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
 gi|213850170|ref|ZP_03381068.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|20455348|sp|Q8Z412|TYSY_SALTI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|25286009|pir||AB0866 thymidylate synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16504080|emb|CAD02826.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138895|gb|AAO70464.1| thymidylate synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 264

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|261342247|ref|ZP_05970105.1| thymidylate synthase [Enterobacter cancerogenus ATCC 35316]
 gi|288315583|gb|EFC54521.1| thymidylate synthase [Enterobacter cancerogenus ATCC 35316]
          Length = 264

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGNLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH +Q  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMDQTHLQLSREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|188534879|ref|YP_001908676.1| thymidylate synthase [Erwinia tasmaniensis Et1/99]
 gi|188029921|emb|CAO97805.1| Thymidylate synthase [Erwinia tasmaniensis Et1/99]
          Length = 264

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLALMQHVLEQGTPKDDRTGTGTLSVFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG+ IDQ+S +++ L+
Sbjct: 61  WFLKGETNIAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGAADGHQIDQLSKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +D+MAL PCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL R PR LP+++I      L 
Sbjct: 181 YALLVHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH AI A V++
Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAI 264


>gi|325283967|ref|YP_004256508.1| Thymidylate synthase [Deinococcus proteolyticus MRP]
 gi|324315776|gb|ADY26891.1| Thymidylate synthase [Deinococcus proteolyticus MRP]
          Length = 264

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L H+++ G+D+ DRTG GTRS FGYQMRFDL +GFPL+TTK+VH KSV++ELL
Sbjct: 1   MRQYLDYLSHIMEHGTDKADRTGTGTRSVFGYQMRFDLQQGFPLVTTKRVHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG+SNV +L  HGV+IWDEWA + G+LGP+YGVQWRSWPDY G  IDQI+ +++ ++
Sbjct: 61  WFLRGESNVGWLQDHGVTIWDEWAREGGKLGPVYGVQWRSWPDYGGGQIDQIAQVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA + +MALPPCH LFQFYV +G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 QNPDSRRLIVSAWNVAQVGEMALPPCHLLFQFYVADGRLSCQLYQRSADSFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEF+ T GD H+Y+NHFEQ + QL R PR LP+M +NP + D+ 
Sbjct: 181 YALLTMMVAQVCDLEPGEFVWTGGDCHVYHNHFEQVERQLKREPRPLPKMHLNPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDFTL  Y+PH  I A+V+V
Sbjct: 241 AFRYEDFTLEGYDPHPGIKAEVAV 264


>gi|259909498|ref|YP_002649854.1| thymidylate synthase [Erwinia pyrifoliae Ep1/96]
 gi|224965120|emb|CAX56652.1| Thymidylate synthase [Erwinia pyrifoliae Ep1/96]
          Length = 264

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+S +++ L+
Sbjct: 61  WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +++MAL PCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL R PR LP+++I      L 
Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH AI A V++
Sbjct: 241 DYCFDDFEIEGYDPHPAIKAPVAI 264


>gi|99032324|pdb|2FTN|A Chain A, E. Coli Thymidylate Synthase Y94f Mutant
 gi|99032325|pdb|2FTO|X Chain X, Y94f Mutant Of Thymidylate Synthase Bound To Thymidine-5'-
           Phosphate And 10-Propargyl-5,8-Dideazafolid Acid
          Length = 264

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 200/263 (76%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP++G QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVFGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|265766866|ref|ZP_06094695.1| thymidylate synthase [Bacteroides sp. 2_1_16]
 gi|263253243|gb|EEZ24719.1| thymidylate synthase [Bacteroides sp. 2_1_16]
          Length = 264

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD+ G+LG +YG QWRSWP YDG  IDQIS  V +++
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHVYGYQWRSWPTYDGGFIDQISEAVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I  KV+V
Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264


>gi|188582027|ref|YP_001925472.1| thymidylate synthase [Methylobacterium populi BJ001]
 gi|179345525|gb|ACB80937.1| Thymidylate synthase [Methylobacterium populi BJ001]
          Length = 264

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDLS+GFPL+TTK++H +S+VHELL
Sbjct: 1   MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLSEGFPLVTTKQLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GV+IWDEWAD +G+LGP+YG QWRSW   DG  +DQI+ I+  + 
Sbjct: 61  WFLKGDTNVAYLRENGVTIWDEWADANGDLGPVYGRQWRSWAKPDGGTVDQIAWILDEIA 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV  G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVAEGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY NH +QA LQLSR+PR LP++ +NP +  L 
Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLDQARLQLSRAPRALPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  YEPH AI A V+V
Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264


>gi|310766593|gb|ADP11543.1| thymidylate synthetase [Erwinia sp. Ejp617]
          Length = 264

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLALMQHVLEQGTPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+S +++ L+
Sbjct: 61  WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLSKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +DKMAL PCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL R PR LP+++I      L 
Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPRALPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH AI A V++
Sbjct: 241 DYCFDDFEIEGYDPHPAIKAPVAI 264


>gi|238764009|ref|ZP_04624965.1| Thymidylate synthase [Yersinia kristensenii ATCC 33638]
 gi|238697826|gb|EEP90587.1| Thymidylate synthase [Yersinia kristensenii ATCC 33638]
          Length = 264

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S +VQ L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q +LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHIDQTNLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A +++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264


>gi|313200661|ref|YP_004039319.1| thymidylate synthase [Methylovorus sp. MP688]
 gi|312439977|gb|ADQ84083.1| thymidylate synthase [Methylovorus sp. MP688]
          Length = 264

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 168/264 (63%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV++ G  + DRTG GT S FGYQMRFDL+ GFPLLTTKKVH KS++HELL
Sbjct: 1   MQTYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAAGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV+IWDEWAD +G LGP+YG QWR+WP  DG+ IDQI+ +V +++
Sbjct: 61  WFLQGSTNIAYLKENGVTIWDEWADAEGNLGPVYGYQWRNWPKPDGSHIDQITQVVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ   QLSR+PR+LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYLNHMEQVKEQLSRTPRSLPTMQINPDVRDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDF+L++Y+P+  I A V+V
Sbjct: 241 AFRYEDFSLQNYDPYPPIKAPVAV 264


>gi|218530838|ref|YP_002421654.1| Thymidylate synthase [Methylobacterium chloromethanicum CM4]
 gi|254790242|sp|B7KQG2|TYSY_METC4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|218523141|gb|ACK83726.1| Thymidylate synthase [Methylobacterium chloromethanicum CM4]
          Length = 264

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL
Sbjct: 1   MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GV+IWDEWAD +G+LGP+YG QWRSW   +G  +DQI+ I+  + 
Sbjct: 61  WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPEGGTVDQIAWILDEIA 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY NH EQ  LQLSR PR LP++ +NP +  L 
Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  YEPH AI A V+V
Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264


>gi|224584790|ref|YP_002638588.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|254790248|sp|C0PXI9|TYSY_SALPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|224469317|gb|ACN47147.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 264

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK  H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKHCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|332883236|gb|EGK03519.1| thymidylate synthase [Dysgonomonas mossii DSM 22836]
          Length = 264

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+ V+  G+ + DRTG GT S FG+Q R++L++GFP+LTTKK+H KS+++ELL
Sbjct: 1   MKQYHDLLKRVLAEGTFKEDRTGTGTISVFGHQSRYNLAEGFPVLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  HGV IW+EWAD++G+LG IYG QWRSWPDY+G  +DQI++ V++++
Sbjct: 61  WFLAGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGYVDQITNAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +  M LPPCH  FQFYV +GKLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVADLPNMNLPPCHAFFQFYVADGKLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q GEF+HTLGD H+Y NH +Q  LQL+R  R LPQMIINP +  + 
Sbjct: 181 YALLLKMMAQVTGLQEGEFVHTLGDAHIYTNHLDQVKLQLTRDFRPLPQMIINPEVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+PH  I  +V+V
Sbjct: 241 DFKYEDFQLEGYDPHPHIKGEVAV 264


>gi|254561824|ref|YP_003068919.1| thymidylate synthetase [Methylobacterium extorquens DM4]
 gi|254269102|emb|CAX25065.1| thymidylate synthetase [Methylobacterium extorquens DM4]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDL+ GFPL+TTK++H +S++HELL
Sbjct: 1   MRAYHDLLTRILSEGVRKEDRTGTGTLSVFGHQMRFDLADGFPLVTTKQLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GV+IWDEWAD +G+LGP+YG QWRSW   DG+ +DQI+ I+  + 
Sbjct: 61  WFLKGDTNVAYLKENGVTIWDEWADANGDLGPVYGKQWRSWAKPDGSTVDQIAWILDEIA 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV +G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY NH EQ  LQLSR PR LP++ +NP +  L 
Sbjct: 181 YALLTAMMAQVTGLKAGDFVHTFGDAHLYANHLEQTHLQLSREPRPLPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  YEPH AI A V+V
Sbjct: 241 DFRFEDIVIEGYEPHPAIKAPVAV 264


>gi|312887675|ref|ZP_07747266.1| thymidylate synthase [Mucilaginibacter paludis DSM 18603]
 gi|311299854|gb|EFQ76932.1| thymidylate synthase [Mucilaginibacter paludis DSM 18603]
          Length = 273

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 171/273 (62%), Positives = 209/273 (76%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV+  G+ + DRTG GT S FGYQMRF+L  GFPL+TTKK+H KS++HEL+
Sbjct: 1   MKQYLDLMRHVLDTGAQKHDRTGTGTISVFGYQMRFNLQDGFPLVTTKKLHLKSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD DG LGP+YG QWRSWP  DG  IDQIS+++ +L+
Sbjct: 61  WFLSGDTNIRYLKENGVRIWDEWADADGNLGPVYGYQWRSWPKPDGGHIDQISNVINTLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---------DNGKLSCQLYQRSGDVF 171
            +P SRR +VSAWNVA +++MALPPCH LFQFYV           GKLSCQLYQRS D+F
Sbjct: 121 NNPDSRRIMVSAWNVADVEQMALPPCHSLFQFYVQPADAAKGETRGKLSCQLYQRSADIF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V   + G+FIHTLGD HLYNNH EQ  LQLSR PR LP M 
Sbjct: 181 LGVPFNIASYALLTMMVAQVCNLEAGDFIHTLGDAHLYNNHIEQTRLQLSREPRPLPLMK 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           INP++ D+  F++EDF L +Y+PH  I   V+V
Sbjct: 241 INPDVKDIFGFKFEDFVLENYDPHPHIKGAVAV 273


>gi|241662502|ref|YP_002980862.1| thymidylate synthase [Ralstonia pickettii 12D]
 gi|240864529|gb|ACS62190.1| thymidylate synthase [Ralstonia pickettii 12D]
          Length = 280

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L  GFPL+TTKKVH KS+V+ELL
Sbjct: 17  MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 76

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGP+YG QWRSWP  +G  IDQI+ ++  ++
Sbjct: 77  WFLQGSTNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 136

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 137 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 196

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G   G+F+ T GD HLYNNHFEQ + QL+R P  LP++ I      + 
Sbjct: 197 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLAREPLPLPKLHIKRKPESIF 256

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF +  Y+ H AI A V+V
Sbjct: 257 DYQYEDFEIVGYQSHPAIKAPVAV 280


>gi|60682981|ref|YP_213125.1| thymidylate synthase [Bacteroides fragilis NCTC 9343]
 gi|81313963|sp|Q5L9L6|TYSY_BACFN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|60494415|emb|CAH09211.1| putative thymidylate synthase B [Bacteroides fragilis NCTC 9343]
 gi|301164446|emb|CBW24004.1| putative thymidylate synthase B [Bacteroides fragilis 638R]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD+ G+LG IYG QWRSWP YDG  IDQIS  V +++
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYDGGFIDQISEAVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I  KV+V
Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264


>gi|288926918|ref|ZP_06420817.1| thymidylate synthase [Prevotella buccae D17]
 gi|288336316|gb|EFC74698.1| thymidylate synthase [Prevotella buccae D17]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR ++  G+ + DRTG GT S FG+QMRF+L +G PLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLRRILDEGTPKGDRTGTGTLSVFGHQMRFNLEEGLPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LGP+YG QWRSWPDY G  IDQI +++  ++
Sbjct: 61  WFLKGDTNVRYLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWN A +D MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HTPDSRRMMVSAWNPAEVDDMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHT GD HLY NH  QA LQL+R+PR LP M +NP +  L 
Sbjct: 181 YALLTMMMAQVTGLRPGDFIHTTGDTHLYQNHLSQARLQLTRTPRPLPTMRLNPEVKSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDFTL +Y+P+  I A VSV
Sbjct: 241 DFRFEDFTLENYDPYDHIKATVSV 264


>gi|163758991|ref|ZP_02166077.1| thymidylate synthase protein [Hoeflea phototrophica DFL-43]
 gi|162283395|gb|EDQ33680.1| thymidylate synthase protein [Hoeflea phototrophica DFL-43]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLR V+  G DR DRTG GT S FG+QMRFDL+ GFP LTTKK+H +S++HELL
Sbjct: 1   MQQYHDLLRLVLDQGFDRDDRTGTGTLSVFGHQMRFDLAAGFPALTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +G+SIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGDTNIAYLKANGISIWDEWADENGDLGPVYGAQWRSWPAPDGTTIDQIANVVRQIE 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPSSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY NHF+QA LQLSR  RTLP M INP I DL 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDAHLYKNHFDQAHLQLSRESRTLPVMRINPEITDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F Y+DF L  Y+PH AI A ++V
Sbjct: 241 AFTYDDFKLEGYDPHPAISAPIAV 264


>gi|332877806|ref|ZP_08445545.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684271|gb|EGJ57129.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +++ G ++ DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLHRILEEGVEKSDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG IYG QWRSWPDY G  IDQI   V +++
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQIQEAVDTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +  M LPPCH  FQFYV NGKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLGNMNLPPCHAFFQFYVANGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V G + G+F+HTLGD H+Y NH EQ  LQL+R PR LP+M +NP++  + 
Sbjct: 181 YALLLMMMAQVTGLKAGDFVHTLGDTHIYKNHLEQVKLQLTREPRPLPRMKLNPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL  Y P   I   VSV
Sbjct: 241 DFKFEDFTLEDYNPWPHIAGAVSV 264


>gi|292487189|ref|YP_003530061.1| thymidylate synthetase [Erwinia amylovora CFBP1430]
 gi|292900435|ref|YP_003539804.1| thymidylate synthase [Erwinia amylovora ATCC 49946]
 gi|291200283|emb|CBJ47411.1| thymidylate synthase [Erwinia amylovora ATCC 49946]
 gi|291552608|emb|CBA19653.1| thymidylate synthetase [Erwinia amylovora CFBP1430]
 gi|312171289|emb|CBX79548.1| thymidylate synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++HV++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLALMQHVLEQGAPKDDRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+S +++ L+
Sbjct: 61  WFLNGDTNTAYLKENKVSIWDEWADENGDLGPVYGKQWRSWGTADGRQIDQLSKVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +D+MAL PCH LFQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SDPDSRRMIVSAWNVGELDQMALAPCHALFQFYVAQGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQA LQL R P  LP+++I      L 
Sbjct: 181 YALLLHMIAQQCDLEVGDFVWTGGDTHLYSNHLEQARLQLQREPHALPKLLIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH AI A V+V
Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAV 264


>gi|311746545|ref|ZP_07720330.1| thymidylate synthase [Algoriphagus sp. PR1]
 gi|126575445|gb|EAZ79777.1| thymidylate synthase [Algoriphagus sp. PR1]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 165/264 (62%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ ++  G  + DRTG GT+S FG+QMRFDLSKGFP++TTKK+H +S++ ELL
Sbjct: 1   MKQYHDLMQKILDEGVTKGDRTGTGTKSIFGHQMRFDLSKGFPVVTTKKLHLRSIIIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GDSN++YL  + VSIWDEWAD++G+LGP+YG QWR WPD  G  IDQI +++  ++
Sbjct: 61  WFLKGDSNINYLKENKVSIWDEWADENGDLGPVYGYQWRHWPDGKGGEIDQIKNLIHQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRRHIVSAWNVA +D+MALPPCH +FQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TKPDSRRHIVSAWNVADVDQMALPPCHTIFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+L TMM+A V   + G+F+HT GD HLY+NH EQA LQLSR  R LP M INP + D+ 
Sbjct: 181 YALFTMMIAQVCDLEVGDFVHTFGDAHLYSNHLEQAKLQLSREIRDLPTMKINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y+PH  I A V+V
Sbjct: 241 DFKYEDFELINYDPHPHIKAAVAV 264


>gi|229915874|ref|YP_002884520.1| thymidylate synthase [Exiguobacterium sp. AT1b]
 gi|259550780|sp|C4L1C9|TYSY_EXISA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|229467303|gb|ACQ69075.1| thymidylate synthase [Exiguobacterium sp. AT1b]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RH++  G  + DRTG GT S FGYQMRF+L +GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYHDLCRHILDQGVVKEDRTGTGTTSVFGYQMRFNLQEGFPLITTKKLHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ G++NV YL  +GV IW+EWAD++G LGP+YG QWRS+P  DG+ +DQ++ +++ ++
Sbjct: 61  WFISGETNVRYLQDNGVRIWNEWADEEGNLGPVYGSQWRSFPRPDGSSVDQLAQVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   +++MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNPGQLEEMALPPCHLLFQFYVADGKLSCQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HTLGD H+Y+NH EQ +LQLSR PR LP++ I  ++  + 
Sbjct: 181 YALLTHMVAHVTGLEVGDFVHTLGDAHIYHNHLEQVELQLSRDPRPLPKLNIVRDVSSIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFR+EDF +  Y+PH  I  +VSV
Sbjct: 241 SFRFEDFEILGYDPHPHIKGEVSV 264


>gi|9257019|pdb|1F4G|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase
           Complexed With Sp-876
 gi|9257020|pdb|1F4G|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase
           Complexed With Sp-876
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 152/263 (57%), Positives = 199/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMXAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|290476668|ref|YP_003469573.1| thymidylate synthetase [Xenorhabdus bovienii SS-2004]
 gi|289176006|emb|CBJ82809.1| thymidylate synthetase [Xenorhabdus bovienii SS-2004]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEDGTAKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ++ +++ L+
Sbjct: 61  WFLNGDTNTQYLRDNNVTIWDEWADENGDLGPVYGKQWRAWSSADGRQIDQLAKVLEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +DKMAL PCH  FQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAEGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  MLA     + G+F+ T GD HLY+NH EQ  LQLSR PRTLP++II      L 
Sbjct: 181 YALLVHMLAQQCDLEVGDFVWTGGDTHLYSNHLEQTKLQLSREPRTLPKLIIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIVDYDPHPGIKAPVAI 264


>gi|271499466|ref|YP_003332491.1| thymidylate synthase [Dickeya dadantii Ech586]
 gi|270343021|gb|ACZ75786.1| thymidylate synthase [Dickeya dadantii Ech586]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YLH + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+ ++++ L+
Sbjct: 61  WFLNGDTNVGYLHDNKVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLQTVLRQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYNNHLEQTRLQLSREPRPLPKLVIKRRPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V+V
Sbjct: 241 DYRFEDFDIEGYDPHPAIKAPVAV 264


>gi|293394670|ref|ZP_06638962.1| thymidylate synthase [Serratia odorifera DSM 4582]
 gi|291422796|gb|EFE96033.1| thymidylate synthase [Serratia odorifera DSM 4582]
          Length = 264

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLAEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S+++Q L+
Sbjct: 61  WFLNGDTNTAYLRDNKVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVLQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +++MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRPLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH AI A V++
Sbjct: 241 DYRFDDFEIEGYDPHPAIKAPVAI 264


>gi|238754836|ref|ZP_04616187.1| Thymidylate synthase [Yersinia ruckeri ATCC 29473]
 gi|238706996|gb|EEP99362.1| Thymidylate synthase [Yersinia ruckeri ATCC 29473]
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLDEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S +V+ L+
Sbjct: 61  WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCHLEVGDFVWTGGDTHLYNNHMEQTQLQLSREPRALPKLVIKRKPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+PH AI A V++
Sbjct: 241 DYHFEDFEIEGYDPHPAIKAPVAI 264


>gi|9955004|pdb|1FFL|A Chain A, Crystal Structure Of The Apo-Thymidylate Synthase R166q
           Mutant
 gi|39654046|pdb|1FWM|A Chain A, Crystal Structure Of The Thymidylate Synthase R166q Mutant
 gi|39654047|pdb|1FWM|B Chain B, Crystal Structure Of The Thymidylate Synthase R166q Mutant
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 200/263 (76%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQ+S DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQQSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|4140014|pdb|1DNA|A Chain A, D221(169)n Mutant Does Not Promote Opening Of The Cofactor
           Imidazolidine Ring
 gi|4140015|pdb|1DNA|B Chain B, D221(169)n Mutant Does Not Promote Opening Of The Cofactor
           Imidazolidine Ring
 gi|157830345|pdb|1BJG|A Chain A, D221(169)n Mutant Does Not Promote Opening Of The Cofactor
           Imidazolidine Ring
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 200/263 (76%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS +VFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCNVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|120599815|ref|YP_964389.1| thymidylate synthase [Shewanella sp. W3-18-1]
 gi|146292249|ref|YP_001182673.1| thymidylate synthase [Shewanella putrefaciens CN-32]
 gi|166231733|sp|A4Y4J1|TYSY_SHEPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231735|sp|A1RME0|TYSY_SHESW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120559908|gb|ABM25835.1| thymidylate synthase [Shewanella sp. W3-18-1]
 gi|145563939|gb|ABP74874.1| thymidylate synthase [Shewanella putrefaciens CN-32]
 gi|319425548|gb|ADV53622.1| thymidylate synthase [Shewanella putrefaciens 200]
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL
Sbjct: 1   MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  + VSIWDEWAD +G+LGP+YG QWRSWP   G+ IDQIS ++  ++
Sbjct: 61  WFLKGETNIAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 AQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR P+ LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTVLQLSREPKPLPLMTILRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF L +Y PH  I A V+V
Sbjct: 241 DYQFEDFELTNYNPHPHIKAPVAV 264


>gi|187927913|ref|YP_001898400.1| thymidylate synthase [Ralstonia pickettii 12J]
 gi|187724803|gb|ACD25968.1| Thymidylate synthase [Ralstonia pickettii 12J]
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L  GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGP+YG QWRSWP  +G  IDQI+ ++  ++
Sbjct: 61  WFLQGSTNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G   G+F+ T GD HLYNNHFEQ   QL+R P  LP++II      + 
Sbjct: 181 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVQTQLAREPLPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF +  Y+ H AI A V+V
Sbjct: 241 DYQYEDFEILGYQSHPAIKAPVAV 264


>gi|161506456|ref|YP_001573568.1| thymidylate synthase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189036941|sp|A9MS82|TYSY_SALAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|160867803|gb|ABX24426.1| hypothetical protein SARI_04659 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG+ IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGHHIDQITTVLSQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV + KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADRKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+FI T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEAGDFIWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPVAI 264


>gi|218463520|ref|ZP_03503611.1| thymidylate synthase [Rhizobium etli Kim 5]
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 175/264 (66%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HVI+ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MQQYLDLLKHVIENGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ + 
Sbjct: 61  WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLIKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPNSRRHIVSAWNPAEVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY+NHFEQA LQL+R P+ LP M INP++ D+ 
Sbjct: 181 YALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFEQAKLQLTRRPKPLPFMRINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L  YE  A+I A ++V
Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264


>gi|253566116|ref|ZP_04843570.1| thymidylate synthase [Bacteroides sp. 3_2_5]
 gi|251945220|gb|EES85658.1| thymidylate synthase [Bacteroides sp. 3_2_5]
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD+ G+LG IYG QWRSWP Y+G  IDQIS  V +++
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYNGGFIDQISEAVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I  KV+V
Sbjct: 241 DFQFEDFELVNYDPHPHIAGKVAV 264


>gi|149279349|ref|ZP_01885480.1| thymidylate synthetase [Pedobacter sp. BAL39]
 gi|149229875|gb|EDM35263.1| thymidylate synthetase [Pedobacter sp. BAL39]
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+ + DRTG GT S FGYQMRF+L +GFP++TTKK+H KS++HEL+
Sbjct: 1   MKQYLDLMQHVLDHGTQKHDRTGTGTISVFGYQMRFNLQEGFPMVTTKKLHLKSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G LGP+YG QWRSWP  DG  IDQIS IV +++
Sbjct: 61  WFLSGDTNIKYLKDNGVKIWDEWADENGNLGPVYGSQWRSWPTPDGRHIDQISQIVNTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I++MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVADIEEMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G +YG+FIHT GD HLYNNH EQA LQLSR  R LP M INP + +LL
Sbjct: 181 YALLTMMVAQVCGLEYGDFIHTFGDAHLYNNHIEQAKLQLSRDIRPLPVMEINPEVKNLL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL+ Y+PH  I   V+V
Sbjct: 241 DFKFEDFTLKGYDPHPHIKGAVAV 264


>gi|332975369|gb|EGK12263.1| thymidylate synthase [Desmospora sp. 8437]
          Length = 264

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL + ++K G+ + DRTG GT S FG+QMRFDL +GFPL+TTKK+H +S++HELL
Sbjct: 1   MKAYLDLCQRILKEGTRKEDRTGTGTLSLFGHQMRFDLGEGFPLVTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N+ YL  H V IW+EWAD++G+LGP+YG QWRS+   DG  +DQI  +V  ++
Sbjct: 61  WFLQGSTNIRYLQEHQVRIWNEWADENGDLGPVYGKQWRSFSGADGKTVDQIQWVVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   +++MALPPCHCLFQFYV +G LSCQLYQRSGD FLGIPFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPTELEEMALPPCHCLFQFYVKDGTLSCQLYQRSGDTFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + GEFIHTLGD HLY NH +Q   QL+R P  LP + +NP++  + 
Sbjct: 181 YALLTHMIAHVTGLKPGEFIHTLGDAHLYLNHLDQVKEQLTRQPLPLPTLKLNPDVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YED  +  Y+ H  I  +VSV
Sbjct: 241 DFTYEDIRIEGYQSHPHIKGEVSV 264


>gi|317493219|ref|ZP_07951642.1| thymidylate synthase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918879|gb|EFV40215.1| thymidylate synthase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLAEGTQKADRTGTGTVSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQIS +++ L+
Sbjct: 61  WFLNGDTNTAYLRENNVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQISKVMEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A  +    G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      + 
Sbjct: 181 YALLVHMMAQQLDLDVGDFVWTGGDTHLYSNHMEQTQLQLSREPRALPKLVIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPVAI 264


>gi|90424757|ref|YP_533127.1| thymidylate synthase [Rhodopseudomonas palustris BisB18]
 gi|123394889|sp|Q211X8|TYSY_RHOPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|90106771|gb|ABD88808.1| thymidylate synthase [Rhodopseudomonas palustris BisB18]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 172/264 (65%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+QY DLL+ ++  G+++ DRTG GT S FG+QMRF L  GFP+LTTK++  K++VHELL
Sbjct: 1   MNQYHDLLQRILGEGAEKHDRTGTGTLSVFGHQMRFALDAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+ +V+ ++
Sbjct: 61  WFLKGDTNIKYLKDHGVSIWDEWADENGDLGPVYGSQWRSWPAADGRSIDQIADVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A ID+MALPPCHCLFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPAEIDQMALPPCHCLFQFYVARGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGEFIHTLGDAHLYSNHLEQARLQLTRTPRDLPVMTINPQVTDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDFTL +Y+PH  I A+V+V
Sbjct: 241 GFRFEDFTLHNYDPHPHIKAEVAV 264


>gi|117921478|ref|YP_870670.1| thymidylate synthase [Shewanella sp. ANA-3]
 gi|166231734|sp|A0KZP5|TYSY_SHESA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|117613810|gb|ABK49264.1| thymidylate synthase [Shewanella sp. ANA-3]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL+TTKK H +S++HELL
Sbjct: 1   MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + VSIWDEWAD++G+LGP+YG QWRSWP   G+ IDQI+ ++  ++
Sbjct: 61  WFLKGDTNIAYLRENKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQIAQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPRQLPTMTILRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF L  Y+PH  I A V+V
Sbjct: 241 DYQFEDFELTHYDPHPHIKAPVAV 264


>gi|255531326|ref|YP_003091698.1| thymidylate synthase [Pedobacter heparinus DSM 2366]
 gi|255344310|gb|ACU03636.1| thymidylate synthase [Pedobacter heparinus DSM 2366]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+ + DRTG GT S FGYQMRF+L +GFP++TTKK+H KS++HEL+
Sbjct: 1   MKQYLDLMQHVLDHGTQKHDRTGTGTISVFGYQMRFNLQEGFPMVTTKKLHLKSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G+LGP+YG QWRSWP   G  IDQI+ IV +++
Sbjct: 61  WFLSGDTNIKYLKDNGVKIWDEWADENGDLGPVYGSQWRSWPKPGGGHIDQIAQIVNTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVAEVENMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G  YG+FIHTLGD HLYNNH EQ  LQLSR PR LP M INP I D+ 
Sbjct: 181 YALLTMMVAQVCGLAYGDFIHTLGDAHLYNNHIEQTRLQLSREPRKLPVMEINPEIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF YEDFTL+ Y+PH  I   V+V
Sbjct: 241 SFSYEDFTLKDYDPHPHIKGAVAV 264


>gi|307129791|ref|YP_003881807.1| thymidylate synthetase [Dickeya dadantii 3937]
 gi|306527320|gb|ADM97250.1| thymidylate synthetase [Dickeya dadantii 3937]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YLH + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+ ++++ L+
Sbjct: 61  WFLNGDTNVGYLHDNKVTIWDEWADENGDLGPVYGKQWRAWGTADGRQIDQLQTVLKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYNNHLEQTHLQLSREPRPLPRLVIKRRPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH AI A V+V
Sbjct: 241 DYQFDDFEIEGYDPHPAIKAPVAV 264


>gi|167764750|ref|ZP_02436871.1| hypothetical protein BACSTE_03140 [Bacteroides stercoris ATCC
           43183]
 gi|167697419|gb|EDS13998.1| hypothetical protein BACSTE_03140 [Bacteroides stercoris ATCC
           43183]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRVLTEGIEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGTIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQLSR PR L QM INP++ ++ 
Sbjct: 181 YALLLQMVAQVTGLKAGDFVHTLGDAHIYLNHLEQVKLQLSREPRALSQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y PH  I  KV+V
Sbjct: 241 DFKYEDFELVNYNPHPHIAGKVAV 264


>gi|332826869|gb|EGJ99669.1| thymidylate synthase [Dysgonomonas gadei ATCC BAA-286]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 157/264 (59%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+ V+  G+ + DRTG GT S FG+Q R++L+ GFP+LTTKK+H KS+++ELL
Sbjct: 1   MKQYHDLLKRVLAEGTHKSDRTGTGTISVFGHQSRYNLADGFPVLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  HGV IW+EWAD++G+LG IYG QWRSWPDY+G  IDQIS++V +++
Sbjct: 61  WFLAGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYNGGFIDQISNVVDTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +  M LPPCH  FQFYV +GKLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVADLPNMNLPPCHAFFQFYVADGKLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ +LQL+R  R LP+MIINP +  + 
Sbjct: 181 YALLLQMMAQVTGLEAGDFVHTLGDAHIYTNHLEQVNLQLTRDFRPLPRMIINPEVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF+L  Y+PH  I  +V++
Sbjct: 241 DFKFEDFSLEGYDPHPHIKGEVAI 264


>gi|261822635|ref|YP_003260741.1| thymidylate synthase [Pectobacterium wasabiae WPP163]
 gi|261606648|gb|ACX89134.1| thymidylate synthase [Pectobacterium wasabiae WPP163]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V++ G+ + DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMNKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL+ + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  LR
Sbjct: 61  WFLNGDTNVAYLNENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLEVGDFVWTGGDTHLYNNHMEQTHLQLSREPRALPKLVIKRRPDTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|161761106|pdb|2VF0|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q
           Complexed With 5no2dump And Bw1843u89
 gi|161761107|pdb|2VF0|B Chain B, Crystal Structure Of The Thymidylate Synthase K48q
           Complexed With 5no2dump And Bw1843u89
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 200/263 (76%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TT++ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTQRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|317479583|ref|ZP_07938710.1| thymidylate synthase [Bacteroides sp. 4_1_36]
 gi|316904245|gb|EFV26072.1| thymidylate synthase [Bacteroides sp. 4_1_36]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGVEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWP+Y G  IDQIS  V++++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPNYKGGFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRDLPQMRINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y PH  I  KVSV
Sbjct: 241 DFKFEDFELINYNPHPHIAGKVSV 264


>gi|126173426|ref|YP_001049575.1| thymidylate synthase [Shewanella baltica OS155]
 gi|166231730|sp|A3D1U3|TYSY_SHEB5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|125996631|gb|ABN60706.1| thymidylate synthase [Shewanella baltica OS155]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL
Sbjct: 1   MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV+YL  + VSIWDEWAD++G+LGP+YG QWRSWP   G+ IDQIS ++  ++
Sbjct: 61  WFLKGETNVAYLRENKVSIWDEWADENGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR P  LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRRPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L +Y PH  I A V+V
Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264


>gi|229544326|ref|ZP_04433385.1| thymidylate synthase [Bacillus coagulans 36D1]
 gi|229325465|gb|EEN91141.1| thymidylate synthase [Bacillus coagulans 36D1]
          Length = 265

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL R V++ G  + DRTG GT S FG+QMRF L  GFPLLTTKK+H KS+++ELL
Sbjct: 2   MKQYLDLCREVLENGVKKDDRTGTGTISVFGHQMRFHLQDGFPLLTTKKLHLKSIIYELL 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L+GD+NV YL  +GV IW+EWAD++G+LGP+YG QWRSW   DG  IDQI+ +++ ++
Sbjct: 62  WMLKGDTNVKYLQENGVRIWNEWADENGDLGPVYGQQWRSWQTRDGRTIDQITQVIEQIK 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNV  ID+MALPPCHC FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 122 TNPDSRRLIVNAWNVGEIDRMALPPCHCFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 181

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ  LQL R PR LP+M++NP + D+ 
Sbjct: 182 YALLTMMIAQVTGLEPGDFVHTLGDAHIYLNHIEQVKLQLEREPRKLPKMVLNPEVKDIF 241

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFRYEDFTL+ Y P+  I  +VSV
Sbjct: 242 SFRYEDFTLKDYNPYPHIPGRVSV 265


>gi|315646630|ref|ZP_07899747.1| thymidylate synthase [Paenibacillus vortex V453]
 gi|315277956|gb|EFU41277.1| thymidylate synthase [Paenibacillus vortex V453]
          Length = 264

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 150/264 (56%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+ ++  G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL
Sbjct: 1   MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLMTTKRIHLKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N+ YL  +GV IWDEWAD++G+LGP+YG QWR+W   DG  IDQI+++++S++
Sbjct: 61  WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGQHIDQIANVIESIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA I+ M LPPCH +FQFYV  GKLSC L  RS D FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVAEIENMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + GEFI + GDVH+Y+NH EQ   QL R P  LP++II      + 
Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHMEQVKTQLEREPYELPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF    Y+ H  I A V+V
Sbjct: 241 DYTFDDFEFEGYQYHPTIKATVAV 264


>gi|157834047|pdb|1TYS|A Chain A, Water-Mediated Substrate(Slash)product Discrimination: The
           Product Complex Of Thymidylate Synthase At 1.83
           Angstroms
          Length = 265

 Score =  397 bits (1021), Expect = e-109,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 2   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 62  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL P H  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 122 NDPDSRRIIVSAWNVGELDKMALAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 181

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 182 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 241

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 242 DYRFEDFEIEGYDPHPGIKAPVAI 265


>gi|288802399|ref|ZP_06407838.1| thymidylate synthase [Prevotella melaninogenica D18]
 gi|288334927|gb|EFC73363.1| thymidylate synthase [Prevotella melaninogenica D18]
          Length = 264

 Score =  397 bits (1021), Expect = e-109,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  ++  G+ + DRT  GT S FG+QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLNLLNRILTEGTQKGDRTRTGTLSIFGHQMRFDLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL  HGV IW+EWAD++GELGP+YG QWRSWPDY G  IDQI ++V+ ++
Sbjct: 61  WFLRGDTNVRYLQEHGVRIWNEWADENGELGPVYGHQWRSWPDYKGGTIDQIKNVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR +V+AWN A ++ MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HDPDSRRMLVTAWNPAEVEDMALPPCHCLFQFYVADGRLSLQLYQRSADSFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLLQMIAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+P   I   V+V
Sbjct: 241 DFKYEDFELIGYDPLPHIPGVVAV 264


>gi|253687303|ref|YP_003016493.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|259550794|sp|C6DAE9|TYSY_PECCP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|251753881|gb|ACT11957.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 264

 Score =  397 bits (1021), Expect = e-109,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  LR
Sbjct: 61  WFLNGDTNVAYLHENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTQLQLSREPRALPKLVIKRRPDTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEIEGYDPHPTIKAPVAI 264


>gi|5107510|pdb|1BQ1|A Chain A, E. Coli Thymidylate Synthase Mutant N177a In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|5107511|pdb|1BQ1|B Chain B, E. Coli Thymidylate Synthase Mutant N177a In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|157830434|pdb|1BQ2|A Chain A, E. Coli Thymidylate Synthase Mutant N177a
          Length = 264

 Score =  397 bits (1021), Expect = e-109,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 199/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PF IASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFAIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|238751480|ref|ZP_04612972.1| Thymidylate synthase [Yersinia rohdei ATCC 43380]
 gi|238710347|gb|EEQ02573.1| Thymidylate synthase [Yersinia rohdei ATCC 43380]
          Length = 264

 Score =  397 bits (1021), Expect = e-109,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S++VQ L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A +++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPIAI 264


>gi|150004500|ref|YP_001299244.1| thymidylate synthase [Bacteroides vulgatus ATCC 8482]
 gi|166231690|sp|A6L1Q8|TYSY_BACV8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|149932924|gb|ABR39622.1| putative thymidylate synthase B [Bacteroides vulgatus ATCC 8482]
          Length = 264

 Score =  397 bits (1021), Expect = e-109,   Method: Composition-based stats.
 Identities = 168/264 (63%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRILTEGVHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD +G+LG IYG QWRSWPDY+G  IDQIS  +++++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV NG+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+F+HTLGD H+Y NH EQ  LQLSR PR LPQM INP+I D+ 
Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDF L +Y+P   I  KVSV
Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264


>gi|160889228|ref|ZP_02070231.1| hypothetical protein BACUNI_01649 [Bacteroides uniformis ATCC 8492]
 gi|270295980|ref|ZP_06202180.1| thymidylate synthase [Bacteroides sp. D20]
 gi|156861235|gb|EDO54666.1| hypothetical protein BACUNI_01649 [Bacteroides uniformis ATCC 8492]
 gi|270273384|gb|EFA19246.1| thymidylate synthase [Bacteroides sp. D20]
          Length = 264

 Score =  397 bits (1021), Expect = e-109,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGVEKSDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWP+Y G  IDQIS  V++++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPNYKGGFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRDLPQMRINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y PH  I  KVSV
Sbjct: 241 DFKFEDFELVNYNPHPHIAGKVSV 264


>gi|303237299|ref|ZP_07323869.1| thymidylate synthase [Prevotella disiens FB035-09AN]
 gi|302482686|gb|EFL45711.1| thymidylate synthase [Prevotella disiens FB035-09AN]
          Length = 264

 Score =  397 bits (1021), Expect = e-109,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +I  G  + DRTG GT S FG QMRF+L +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRIITDGVQKGDRTGTGTLSVFGNQMRFNLQEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++GELGP+YG QWRSWP+Y G  IDQIS +V  ++
Sbjct: 61  WFLKGDTNVKYLQEHGVRIWNEWADENGELGPVYGHQWRSWPNYKGGTIDQISDVVDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A ++ MALPPCHCLFQFYV N KLS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPNSRRMLVTAWNPAEVEDMALPPCHCLFQFYVANDKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G + G+F++T GD HLY NH EQA LQL+R PR LP+M INPN+  + 
Sbjct: 181 YALLLQMMAQATGLEVGDFVYTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPNVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y PH  I A+VSV
Sbjct: 241 DFQYEDFELIDYNPHPHIAAEVSV 264


>gi|325954868|ref|YP_004238528.1| Thymidylate synthase [Weeksella virosa DSM 16922]
 gi|323437486|gb|ADX67950.1| Thymidylate synthase [Weeksella virosa DSM 16922]
          Length = 264

 Score =  397 bits (1021), Expect = e-109,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL + V++ G+ + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH KS+++ELL
Sbjct: 1   MKQYLDLCKKVMQEGTLKEDRTGTGTKSIFGYQMRFDLNEGFPLVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+SYL  +GV IW+EWAD++GELGP+YG QWRSW   +G  IDQI  ++  ++
Sbjct: 61  WFLKGETNISYLTENGVRIWNEWADENGELGPVYGKQWRSWAKPNGETIDQIKEVIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MAL PCH  FQFYV + KLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGELDEMALAPCHAFFQFYVADDKLSLQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V   + G+F+HT GD H+Y NHF+Q +LQLSR P  LP+M INP++ D+ 
Sbjct: 181 YALLQMMVAQVCNLELGDFVHTFGDAHIYKNHFDQIELQLSRDPFPLPKMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++ DF L  Y+ H  I   V+V
Sbjct: 241 DFQFSDFELIDYQSHPHIKGIVAV 264


>gi|227327704|ref|ZP_03831728.1| thymidylate synthase [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
          Length = 264

 Score =  397 bits (1020), Expect = e-109,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YLH + VSIWDEWAD++G LGP+YG QWRSW   DG  IDQ+ +++  LR
Sbjct: 61  WFLNGDTNVAYLHENKVSIWDEWADENGNLGPVYGKQWRSWGAADGREIDQLKNVLTQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ +LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTNLQLSREPRALPKLVIKRRPDTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|282879252|ref|ZP_06288002.1| thymidylate synthase [Prevotella buccalis ATCC 35310]
 gi|281298645|gb|EFA91064.1| thymidylate synthase [Prevotella buccalis ATCC 35310]
          Length = 264

 Score =  397 bits (1020), Expect = e-109,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +++ G  + DRTG GT+S FG+QMRF+L  GFP+LTTKK+H KS+++ELL
Sbjct: 1   MQQYLDLLHRILEEGKVKTDRTGTGTKSIFGHQMRFNLEDGFPVLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGVSIW+EWAD++G+LGP+YG QWRSWPD+ G  IDQI +++  ++
Sbjct: 61  WFLKGDTNVKYLQEHGVSIWNEWADENGDLGPVYGHQWRSWPDHRGGTIDQIQNVIDLIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +V+AWN A I +MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HHPDSRRMLVTAWNPADISEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHT GD HLY NH EQA LQL+R+PR LPQM +NP++  L 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTTGDTHLYLNHIEQAKLQLTRTPRELPQMKLNPDVKSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L +Y P   I A+V+V
Sbjct: 241 DFRYEDFELLNYNPWPHIKAEVAV 264


>gi|2392650|pdb|1ZPR|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
 gi|2392651|pdb|1ZPR|B Chain B, E. Coli Thymidylate Synthase Mutant E58q In Complex With
           Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump)
          Length = 264

 Score =  397 bits (1020), Expect = e-109,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 200/263 (76%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++H+LLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHQLLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|328542989|ref|YP_004303098.1| dihydrofolate reductase-thymidylate synthase-like protein
           [polymorphum gilvum SL003B-26A1]
 gi|326412735|gb|ADZ69798.1| putative dihydrofolate reductase-thymidylate synthase,
           putative-like protein [Polymorphum gilvum SL003B-26A1]
          Length = 322

 Score =  397 bits (1020), Expect = e-109,   Method: Composition-based stats.
 Identities = 171/267 (64%), Positives = 209/267 (78%), Gaps = 4/267 (1%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL++ ++  G+DR DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H KS++HELLW
Sbjct: 56  QQYLDLMQKILDEGTDRGDRTGTGTRSIFGHQMRFDLAAGFPLVTTKKLHLKSIIHELLW 115

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQ 117
           FL GD+N+ YL+RHGV IWD+WAD+ GELGP+YG QWRSWP    +  G  IDQI+++++
Sbjct: 116 FLAGDTNIGYLNRHGVKIWDDWADEHGELGPVYGAQWRSWPAPTPEDGGRTIDQIATVLR 175

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
            +R  P SRR IVSAWN AL+D MALPPCH LFQFYV  G+LSCQLYQRS DVFLG+PFN
Sbjct: 176 MIRETPESRRLIVSAWNPALVDAMALPPCHALFQFYVAEGRLSCQLYQRSADVFLGVPFN 235

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           IASY+LLTMM+A V G + G F+HT GD HLY NHF QA  QL+R PR LP M +NP + 
Sbjct: 236 IASYALLTMMVAQVTGLKPGHFVHTFGDAHLYANHFAQAREQLTREPRPLPTMTLNPAVT 295

Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264
           DL +F YEDFTL  Y+PH  I A ++V
Sbjct: 296 DLFAFTYEDFTLSGYDPHPHIKAPIAV 322


>gi|332160563|ref|YP_004297140.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318606963|emb|CBY28461.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325664793|gb|ADZ41437.1| thymidylate synthase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 264

 Score =  397 bits (1020), Expect = e-109,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S +VQ L+
Sbjct: 61  WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A +++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264


>gi|217974282|ref|YP_002359033.1| thymidylate synthase [Shewanella baltica OS223]
 gi|304409350|ref|ZP_07390970.1| thymidylate synthase [Shewanella baltica OS183]
 gi|307303708|ref|ZP_07583461.1| thymidylate synthase [Shewanella baltica BA175]
 gi|254790249|sp|B8EBR5|TYSY_SHEB2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|217499417|gb|ACK47610.1| Thymidylate synthase [Shewanella baltica OS223]
 gi|304351868|gb|EFM16266.1| thymidylate synthase [Shewanella baltica OS183]
 gi|306912606|gb|EFN43029.1| thymidylate synthase [Shewanella baltica BA175]
          Length = 264

 Score =  397 bits (1020), Expect = e-109,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL
Sbjct: 1   MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV+YL  + VSIWDEWAD +G+LGP+YG QWRSWP   G+ IDQIS ++  ++
Sbjct: 61  WFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR P  LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L +Y PH  I A V+V
Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264


>gi|50119928|ref|YP_049095.1| thymidylate synthase [Pectobacterium atrosepticum SCRI1043]
 gi|62901301|sp|Q6D8I6|TYSY_ERWCT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|49610454|emb|CAG73899.1| thymidylate synthase [Pectobacterium atrosepticum SCRI1043]
          Length = 264

 Score =  397 bits (1020), Expect = e-109,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL+ + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  LR
Sbjct: 61  WFLNGDTNVAYLNENKVSIWDEWADENGDLGPVYGKQWRSWGAADGRQIDQLKNVLTQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHMEQTHLQLSREPRALPKLVIKRRPDTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|313575265|emb|CBI71203.1| hypothetical protein [uncultured bacterium]
          Length = 264

 Score =  397 bits (1020), Expect = e-109,   Method: Composition-based stats.
 Identities = 180/264 (68%), Positives = 220/264 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV++ G+DR DRTG GTRS FGYQMRFDL++GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLRHVMETGTDRGDRTGKGTRSIFGYQMRFDLAEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YL  +GVSIWDEWAD+ GELGP+YG QWRSWP  DG  IDQIS +++ L+
Sbjct: 61  WFLKGDTNVAYLTENGVSIWDEWADEKGELGPVYGYQWRSWPAPDGRHIDQISQLIEGLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNV  +D+MALP CHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 VNPNSRRHIVSAWNVGQLDEMALPACHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y++HFEQA LQL+R+P+ LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDTHIYSDHFEQAKLQLTRTPKALPTMRINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFR+EDF L  YE    I A V+V
Sbjct: 241 SFRFEDFALEGYEADPHIKAAVAV 264


>gi|217970012|ref|YP_002355246.1| thymidylate synthase [Thauera sp. MZ1T]
 gi|217507339|gb|ACK54350.1| thymidylate synthase [Thauera sp. MZ1T]
          Length = 264

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV++ G  + DRTG GT S FG+QMRF L  GFPLLTTKK+H +S++HELL
Sbjct: 1   MRQYLDLMRHVLEHGDPKTDRTGTGTLSVFGWQMRFRLQDGFPLLTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD DGELGP+YG QWR W   DG  +DQI+ +V+S+R
Sbjct: 61  WFLQGDTNIRYLRENGVSIWDEWADADGELGPVYGKQWRRWETADGRSVDQIARVVESIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRRH+VSAWN   +D MALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RTPDSRRHLVSAWNPGEVDAMALPPCHALFQFYVAGGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + G+F+ T GD HLY+NH  QA  QL R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQVCELEAGDFVWTGGDCHLYSNHLRQAREQLERAPRPLPTLRLNPAVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  L  Y+PH  I A V+V
Sbjct: 241 GFRFEDIALEGYDPHPHIKAPVAV 264


>gi|309781084|ref|ZP_07675822.1| thymidylate synthase [Ralstonia sp. 5_7_47FAA]
 gi|308920150|gb|EFP65809.1| thymidylate synthase [Ralstonia sp. 5_7_47FAA]
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRF+L  GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MKPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFNLQDGFPLVTTKKVHIKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGP+YG QWRSWP  +G  IDQI+ ++  ++
Sbjct: 61  WFLQGATNVRWLQDNGVTIWDEWADADGELGPVYGSQWRSWPTPNGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G   G+F+ T GD HLYNNHFEQ   QL+R P  LP++ I      + 
Sbjct: 181 YALLVHMVAQQTGLDVGDFVWTGGDCHLYNNHFEQVQTQLAREPLPLPKLHIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF +  Y+ H AI A V+V
Sbjct: 241 DYQYEDFEIVGYQSHPAIKAPVAV 264


>gi|294673977|ref|YP_003574593.1| thymidylate synthase [Prevotella ruminicola 23]
 gi|294472139|gb|ADE81528.1| thymidylate synthase [Prevotella ruminicola 23]
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD+L  ++  G+ + DRTG GT S FG Q R++L  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDILNRILTEGTQKGDRTGTGTISIFGTQSRYNLDDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++GELGP+YG QWRSWPDY+G  IDQI  ++  L+
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADENGELGPVYGHQWRSWPDYNGGTIDQIQYVLDQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++KMALPPCH +FQFYV + +LS QLYQRS D FLG+PFNIAS
Sbjct: 121 NNPNSRRMIVSAWNVAEVNKMALPPCHTIFQFYVADDRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V GF+ G+FIHT GD HLY NH EQA LQL+R PR LP+MIINP++ +L 
Sbjct: 181 YALLLQMMAQVTGFKAGDFIHTTGDTHLYLNHIEQAKLQLTREPRPLPKMIINPDVKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF L  Y+PH  I A+VSV
Sbjct: 241 DFTFEDFQLEGYDPHPHIKAEVSV 264


>gi|294778259|ref|ZP_06743685.1| thymidylate synthase [Bacteroides vulgatus PC510]
 gi|294447887|gb|EFG16461.1| thymidylate synthase [Bacteroides vulgatus PC510]
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRILTEGVHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD +G+LG IYG QWRSWPDY+G  IDQIS  +++++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV NG+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+F+HTLGD H+Y NH EQ  LQLSR PR LPQM INP+I ++ 
Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDF L +Y+P   I  KVSV
Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264


>gi|253988063|ref|YP_003039419.1| thymidylate synthase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253779513|emb|CAQ82674.1| thymidylate synthase [Photorhabdus asymbiotica]
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/264 (57%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKRVLEEGTSKADRTGTGTISIFGHQMRFNLQDGFPLVTTKRCHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YLH + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+ ++++ L+
Sbjct: 61  WFLNGDTNIQYLHDNSVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLKTVLEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR+LP+++I      L 
Sbjct: 181 YALLVHMIAQQCDLEVGDFVWTGGDTHLYSNHMEQTQLQLSREPRSLPKLMIKRKPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH  I A V++
Sbjct: 241 DYKFDDFEIVDYDPHPGIKAPVAI 264


>gi|227115444|ref|ZP_03829100.1| thymidylate synthase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L  GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTRSIFGHQMRFNLQDGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YLH + VSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+ +++  LR
Sbjct: 61  WFLNGDTNVVYLHENKVSIWDEWADENGDLGPVYGKQWRSWGAADGREIDQLKNVLTQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ +LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMVAQQCDLDVGDFVWTGGDTHLYNNHLEQTNLQLSREPRALPKLVIKRRPDTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFEIEGYDPHPAIKAPVAI 264


>gi|172044615|sp|Q0K889|TYSY_RALEH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL  GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLRAGFPVVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  HGV+IWDEWAD++GELGP+YG QWRSWP  DG  IDQI+ +V  +R
Sbjct: 61  WFLQGSTNVRWLQEHGVTIWDEWADENGELGPVYGSQWRSWPTPDGRHIDQITDLVAQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWNVA I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + G+F+ T GD HLYNNHFEQ   QL+R P  LPQ+ I      + 
Sbjct: 181 YALLTHMMAQQTGLEVGDFVWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF L  Y+ HAAI A V+V
Sbjct: 241 DYRYEDFELAGYQSHAAIKAPVAV 264


>gi|256823628|ref|YP_003147591.1| thymidylate synthase [Kangiella koreensis DSM 16069]
 gi|256797167|gb|ACV27823.1| thymidylate synthase [Kangiella koreensis DSM 16069]
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++RHVI  G D+ DRTG GTRS FGYQMRF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 1   MKQYLDMMRHVINNGEDKGDRTGTGTRSVFGYQMRFNLQDGFPLVTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWD+WAD++G+LGP+YG QWRSW   DG  IDQISS++  ++
Sbjct: 61  WFLNGDTNIKYLKDNGVSIWDDWADENGDLGPVYGEQWRSWKKPDGTTIDQISSVLNQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V A+N  + D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRLMVVAYNPGVADEMALPPCHSLFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + GEFI T GD HLY+NHFEQA+ QLSR P +LP + I      L 
Sbjct: 181 YALLTHMIAQQAGLEVGEFIWTGGDTHLYSNHFEQANEQLSREPLSLPALKIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  YE H  I A V+V
Sbjct: 241 DYQFEDFEIVGYESHPHIKAPVAV 264


>gi|281602182|gb|ADA75166.1| Thymidylate synthase [Shigella flexneri 2002017]
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S F +QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFVHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      + 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  + A V++
Sbjct: 241 DYRFEDFEIEGYDPHPGVKAPVAI 264


>gi|251790775|ref|YP_003005496.1| thymidylate synthase [Dickeya zeae Ech1591]
 gi|247539396|gb|ACT08017.1| thymidylate synthase [Dickeya zeae Ech1591]
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLEEGTPKDDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL+ + VSIWDEWAD++G LGP+YG QWR+W   DG  IDQ+ +++  L+
Sbjct: 61  WFLNGDTNIGYLNDNKVSIWDEWADENGSLGPVYGKQWRAWGAADGRQIDQLQTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVANGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYNNHLEQTRLQLSREPRPLPRLVIKRRPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V+V
Sbjct: 241 DYRFEDFDIEGYDPHPAIKAPVAV 264


>gi|293375484|ref|ZP_06621763.1| thymidylate synthase [Turicibacter sanguinis PC909]
 gi|325844947|ref|ZP_08168312.1| thymidylate synthase [Turicibacter sp. HGF1]
 gi|292645884|gb|EFF63915.1| thymidylate synthase [Turicibacter sanguinis PC909]
 gi|325488997|gb|EGC91386.1| thymidylate synthase [Turicibacter sp. HGF1]
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ G+ + DRTG GT STFGYQMRFDL++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLDLLNHVLENGTTKGDRTGTGTISTFGYQMRFDLAEGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ GD+NV YL  +GV IW+EWAD++G LGP+YG QWR W   +G VIDQ++ +V+ ++
Sbjct: 61  WFISGDTNVKYLQENGVRIWNEWADEEGNLGPVYGKQWRRWEGANGTVIDQLAEVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNV  +D+MALPPCH LFQFYV++GKLSC LYQRS D+FLG+PFNIAS
Sbjct: 121 TNPNSRRLIVNAWNVGELDQMALPPCHLLFQFYVNDGKLSCMLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HTLGD H+Y NH EQ  +QL R  R LP M +N ++  + 
Sbjct: 181 YALLTMMIAQVTGLEVGEFVHTLGDAHIYQNHLEQVKIQLGRDIRPLPTMKLNQDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDFTL  Y+PH  +   V+V
Sbjct: 241 DFKYEDFTLEGYDPHPLLKGVVAV 264


>gi|145297746|ref|YP_001140587.1| thymidylate synthase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166231686|sp|A4SIW7|TYSY_AERS4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|142850518|gb|ABO88839.1| thymidylate synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 264

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 158/264 (59%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  G+ + DRTG GT S FG+QMRF+L++GFPL+TTKK H +S++HELL
Sbjct: 1   MRVYLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL   GVSIWDEWAD++G+LGP+YG QWRSWP  DG VIDQI   V  ++
Sbjct: 61  WFLNGDTNTAYLKEQGVSIWDEWADENGDLGPVYGAQWRSWPAADGAVIDQIQRAVDDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+F+ T GDVHLY+NH EQ  LQLSR PR LPQ+ I      + 
Sbjct: 181 YALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLSREPRPLPQLAIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A V++
Sbjct: 241 DYRFEDFEILGYDPHPGIKAPVAI 264


>gi|254503707|ref|ZP_05115858.1| thymidylate synthase [Labrenzia alexandrii DFL-11]
 gi|222439778|gb|EEE46457.1| thymidylate synthase [Labrenzia alexandrii DFL-11]
          Length = 268

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 173/268 (64%), Positives = 216/268 (80%), Gaps = 4/268 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  +++ G DR DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYHDLLSKILEDGIDRGDRTGTGTRSIFGHQMRFDLSEGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIV 116
           WF+ GD+N++YL  HGV IWD+WAD++G+LGP+YG QWRSWP    D  G  IDQIS+++
Sbjct: 61  WFVAGDTNIAYLKEHGVKIWDDWADENGDLGPVYGYQWRSWPAPYRDGSGQSIDQISNVL 120

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           + +R  P SRR IVSAWN AL+D+MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PF
Sbjct: 121 EMIRKSPESRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADVFLGVPF 180

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           NIASY+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA  QL+R+PR LP+M INP +
Sbjct: 181 NIASYALLTMMIAQVTGLKPGDFVHTLGDAHLYSNHFDQAREQLTRAPRALPEMKINPAV 240

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            DL +F YEDF L  Y+PH  I A ++V
Sbjct: 241 TDLFAFTYEDFELTGYDPHPHIAAPIAV 268


>gi|329921994|ref|ZP_08277801.1| thymidylate synthase [Paenibacillus sp. HGF5]
 gi|328942454|gb|EGG38717.1| thymidylate synthase [Paenibacillus sp. HGF5]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 150/264 (56%), Positives = 192/264 (72%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+ ++  G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL
Sbjct: 1   MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLVTTKRIHLKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N+ YL  +GV IWDEWAD++G+LGP+YG QWR+W   DG  IDQI+ ++ S++
Sbjct: 61  WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGRHIDQIAGVIDSIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA ID M LPPCH +FQFYV  GKLSC L  RS D FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVAEIDNMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GEFI + GDVH+Y+NH EQ   QL R P  LP+++I      + 
Sbjct: 181 YALLTHMVAQQCDLEPGEFIWSGGDVHIYSNHMEQVRTQLEREPYALPKLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF    Y+ H  I A V+V
Sbjct: 241 DYTFEDFEFEGYQYHPTIKATVAV 264


>gi|212693595|ref|ZP_03301723.1| hypothetical protein BACDOR_03112 [Bacteroides dorei DSM 17855]
 gi|237708754|ref|ZP_04539235.1| thymidylate synthase [Bacteroides sp. 9_1_42FAA]
 gi|237724195|ref|ZP_04554676.1| thymidylate synthase [Bacteroides sp. D4]
 gi|265755979|ref|ZP_06090446.1| thymidylate synthase [Bacteroides sp. 3_1_33FAA]
 gi|212663848|gb|EEB24422.1| hypothetical protein BACDOR_03112 [Bacteroides dorei DSM 17855]
 gi|229437383|gb|EEO47460.1| thymidylate synthase [Bacteroides dorei 5_1_36/D4]
 gi|229457180|gb|EEO62901.1| thymidylate synthase [Bacteroides sp. 9_1_42FAA]
 gi|263234057|gb|EEZ19658.1| thymidylate synthase [Bacteroides sp. 3_1_33FAA]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRILTEGVHKEDRTGTGTISIFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD +G+LG IYG QWRSWPDY+G  IDQIS  +++++
Sbjct: 61  WFLQGDTNIKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV NG+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+F+HTLGD H+Y NH EQ  LQLSR PR LPQM INP+I D+ 
Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDF L +Y+P   I  KVSV
Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264


>gi|148747783|ref|YP_001285862.1| putative thymidylate synthase [Geobacillus virus E2]
 gi|113715725|gb|ABI36874.1| putative thymidylate synthase [Geobacillus virus E2]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +++ G ++ DRTGVGT S FG Q+RF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 1   MKQYLDLLQDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGPIYG QWRSW   DG  IDQI+ +V+ ++
Sbjct: 61  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTIDQIAWVVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P+SRR +VSAWNVA +D+M LPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPHSRRLLVSAWNVAELDEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       GE I T GDVHLY NH EQA LQL+R PR LP++++      + 
Sbjct: 181 YALLTHMVAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVLKRKPPSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF +  Y+PH AI A V+V
Sbjct: 241 DYEYDDFEIVGYDPHPAIKAPVAV 264


>gi|152999765|ref|YP_001365446.1| thymidylate synthase [Shewanella baltica OS185]
 gi|160874384|ref|YP_001553700.1| thymidylate synthase [Shewanella baltica OS195]
 gi|166231731|sp|A6WKP4|TYSY_SHEB8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036943|sp|A9L5M3|TYSY_SHEB9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|151364383|gb|ABS07383.1| Thymidylate synthase [Shewanella baltica OS185]
 gi|160859906|gb|ABX48440.1| Thymidylate synthase [Shewanella baltica OS195]
 gi|315266619|gb|ADT93472.1| thymidylate synthase [Shewanella baltica OS678]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H++  G D+ DRTG GTRS FGYQMRFDLSKGFPL++TKK H +S++HELL
Sbjct: 1   MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV+YL  + VSIWDEWAD +G+LGP+YG QWRSWP   G+ IDQIS ++  ++
Sbjct: 61  WFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           + P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR P  LP M I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRRPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L +Y PH  I A V+V
Sbjct: 241 DYQFDDFELTNYAPHPHIKAPVAV 264


>gi|238758887|ref|ZP_04620059.1| Thymidylate synthase [Yersinia aldovae ATCC 35236]
 gi|238702844|gb|EEP95389.1| Thymidylate synthase [Yersinia aldovae ATCC 35236]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G LGP+YG QWR+W   DG  IDQ+S++V+ L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGSLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A +++
Sbjct: 241 DYRFDDFEIEGYDPHPGIKAPIAI 264


>gi|326330104|ref|ZP_08196416.1| thymidylate synthase [Nocardioidaceae bacterium Broad-1]
 gi|325952114|gb|EGD44142.1| thymidylate synthase [Nocardioidaceae bacterium Broad-1]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  ++  G ++ DRTG GT S FG+Q R+DL++GFPLLTTKK+H +SV  ELL
Sbjct: 1   MQSYLDLLTRILDEGVEKSDRTGTGTISVFGHQTRYDLAEGFPLLTTKKIHTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L   G++IWDEWAD++G+LGP+YG QWRSWP  DG  +DQI+ I+  ++
Sbjct: 61  WFLRGDTNVRWLQERGITIWDEWADENGDLGPVYGYQWRSWPTPDGRHVDQIARIIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRRHIV+AWN A ID MALPPCH L QFYV +GKLS QLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRHIVTAWNPADIDDMALPPCHTLCQFYVADGKLSLQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G Q GEF+HTLGD HLY+NH EQA LQL+R+PR LP + +NP++ D+ 
Sbjct: 181 YALLTHMVAHVTGLQPGEFVHTLGDAHLYSNHVEQARLQLTRTPRPLPTLRLNPDVKDID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D T+  Y+P   I A V+V
Sbjct: 241 AFDLDDITVEGYDPAPGIKAPVAV 264


>gi|330998283|ref|ZP_08322108.1| thymidylate synthase [Paraprevotella xylaniphila YIT 11841]
 gi|329568672|gb|EGG50473.1| thymidylate synthase [Paraprevotella xylaniphila YIT 11841]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +++ G ++ DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLHRIMEEGVEKSDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG IYG QWRSWPDY G  IDQI   V ++R
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQIQEAVDTIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +  M LPPCH  FQFYV  GKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLGNMNLPPCHAFFQFYVAKGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V G + G+F+HTLGD H+Y NH EQ  LQL+R PR LP+M +NP++  + 
Sbjct: 181 YALLLMMMAQVTGLKAGDFVHTLGDTHIYKNHLEQVKLQLTREPRPLPRMRLNPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +Y P   I   VSV
Sbjct: 241 DFKFEDFTLENYNPWPHIAGAVSV 264


>gi|220928734|ref|YP_002505643.1| thymidylate synthase [Clostridium cellulolyticum H10]
 gi|254790234|sp|B8I0T8|TYSY_CLOCE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219999062|gb|ACL75663.1| thymidylate synthase [Clostridium cellulolyticum H10]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL +H++  G  + DRTG GT STFGYQMRFDL KGFPLLTTKK+H KS++HELL
Sbjct: 1   MQQYLDLCKHILNNGIKKEDRTGTGTISTFGYQMRFDLQKGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ G++N+ YL  +GVSIWDEWAD++G LGP+YG QWRSW   DG  IDQ+  ++  ++
Sbjct: 61  WFISGNTNIKYLKDNGVSIWDEWADENGNLGPVYGHQWRSWDTADGRSIDQLKGVIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVS+WNV  I+KMALPPCHC +QFYV NG LSC LYQRS DVF+G+PFNIAS
Sbjct: 121 NNPDSRRLIVSSWNVGEIEKMALPPCHCFYQFYVVNGTLSCMLYQRSADVFIGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+L TMM+A   G + GEF+HTLGD H+Y NH EQ  LQLSR PR LP+M INP+I DL 
Sbjct: 181 YALFTMMIAQSCGLRAGEFVHTLGDAHIYLNHVEQVKLQLSRDPRPLPKMNINPDIKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+Y DFTL  Y+PH  I   V+V
Sbjct: 241 QFKYSDFTLTDYDPHPHIKGAVAV 264


>gi|94311504|ref|YP_584714.1| thymidylate synthase [Cupriavidus metallidurans CH34]
 gi|122987875|sp|Q1LK81|TYSY_RALME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|93355356|gb|ABF09445.1| thymidylate synthetase [Cupriavidus metallidurans CH34]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDL++GFP++TTKK+H KS++HELL
Sbjct: 1   MKQYLDFMRHVYEHGTEKSDRTGTGTRSVFGYQMRFDLNEGFPVVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N+ YL  +GV+IWDEWAD +GELGPIYG QWR+WP  DG  IDQI+ +VQ +R
Sbjct: 61  WFLQGSTNIKYLKDNGVTIWDEWADANGELGPIYGYQWRAWPTPDGRHIDQITEVVQQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 DNPDSRRLIVSAWNVGEIPQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       G+F+ T GD H+Y+NHFEQ + QLSR P  LP + I      + 
Sbjct: 181 YALLTHMIAQQCDLGVGDFVWTGGDCHIYSNHFEQVETQLSREPMKLPTLRIKHRPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++Y+DF L  YE H AI A V+V
Sbjct: 241 DYKYDDFELVGYESHPAIKAPVAV 264


>gi|88858168|ref|ZP_01132810.1| thymidylate synthase [Pseudoalteromonas tunicata D2]
 gi|88819785|gb|EAR29598.1| thymidylate synthase [Pseudoalteromonas tunicata D2]
          Length = 277

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 161/277 (58%), Positives = 203/277 (73%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+RHV + G  + DRTG GT S FGYQMRF+LS+GFPL+TTKK H KS++HELL
Sbjct: 1   MKQYLELMRHVKEHGVKKEDRTGTGTISVFGYQMRFNLSEGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWD WA ++GELGP+YG QWRSW   DG VIDQI+ +++ ++
Sbjct: 61  WFLAGDTNIKYLTDNGVKIWDGWATEEGELGPVYGAQWRSWQGLDGQVIDQIAELIKQIK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN A++              K ALPPCH LFQFYV  GKLSCQLYQRS
Sbjct: 121 TNPDSRRLIVSAWNPAVLPDTQFSPSENAAMGKQALPPCHTLFQFYVLEGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+ LG+PFNIASY+LLTMM+A V   + G+F+HT GD HLY+NH EQ D QLSR+P   
Sbjct: 181 ADILLGVPFNIASYALLTMMIAQVCDLKVGDFVHTFGDAHLYSNHLEQVDEQLSRTPFPK 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP + D+ +F++EDF L +Y+ H  I A V++
Sbjct: 241 PTMKINPAVKDIFAFKFEDFELENYQAHPHIKAPVAI 277


>gi|226946823|ref|YP_002801896.1| thymidylate synthase [Azotobacter vinelandii DJ]
 gi|259550764|sp|C1DK16|TYSY_AZOVD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226721750|gb|ACO80921.1| Thymidylate synthase protein [Azotobacter vinelandii DJ]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V + G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK H KS+VHELL
Sbjct: 1   MKQYLDLMRLVREHGTFKSDRTGTGTFSVFGHQMRFDLAEGFPLVTTKKCHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+++V  +R
Sbjct: 61  WFLKGDTNIRYLKENGVSIWDEWADGNGDLGPVYGYQWRSWPAPDGRHIDQIANVVNMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+M LPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 DNPDSRRLIVSAWNPALIDEMKLPPCHALFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL +M+A V G   GEF+ T GD HLY NH EQADLQLSR P  LP M ++P++ DL 
Sbjct: 181 YALLILMMAQVTGLAPGEFVWTGGDCHLYANHLEQADLQLSREPLPLPTMQLDPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  Y+ H  I A V++
Sbjct: 241 AFRFEDFELVGYQSHPHIKAPVAI 264


>gi|254882766|ref|ZP_05255476.1| thymidylate synthase [Bacteroides sp. 4_3_47FAA]
 gi|319643926|ref|ZP_07998501.1| thymidylate synthase [Bacteroides sp. 3_1_40A]
 gi|254835559|gb|EET15868.1| thymidylate synthase [Bacteroides sp. 4_3_47FAA]
 gi|317384450|gb|EFV65417.1| thymidylate synthase [Bacteroides sp. 3_1_40A]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 168/264 (63%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRILTEGIHKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD +G+LG IYG QWRSWPDY+G  IDQIS  +++++
Sbjct: 61  WFLQGDTNVKYLQDNGVRIWNEWADANGDLGHIYGYQWRSWPDYNGGFIDQISEAIETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ M LPPCH  FQFYV NG+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+F+HTLGD H+Y NH EQ  LQLSR PR LPQM INP+I D+ 
Sbjct: 181 YALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDF L +Y+P   I  KVSV
Sbjct: 241 SFKYEDFELVNYDPWPHIAGKVSV 264


>gi|254468912|ref|ZP_05082318.1| thymidylate synthase [beta proteobacterium KB13]
 gi|207087722|gb|EDZ65005.1| thymidylate synthase [beta proteobacterium KB13]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ G  + DRTG GT S FGYQ+RFDLS+ FPLLTTKK+H KSV+HELL
Sbjct: 1   MRQYLDLLNHVLEHGDKKEDRTGTGTISVFGYQIRFDLSEKFPLLTTKKIHLKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N+ YL  +GVSIWDEWAD+ G+LGP+YG QWRSW   DG  IDQIS+++++++
Sbjct: 61  WFLKGSTNIGYLKENGVSIWDEWADEHGDLGPVYGSQWRSWQTSDGRTIDQISNLIENIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +DKM LPPCHC FQFYV N KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGDVDKMKLPPCHCFFQFYVANDKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V     GEF+HTLGD H+Y+NH EQ   QLSR  + LP M INP++ D+ 
Sbjct: 181 YALLTLMIAQVTNLAPGEFVHTLGDAHIYSNHIEQVKQQLSREAKDLPIMKINPHVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+Y+DF + +Y+PH  I A V+V
Sbjct: 241 SFKYDDFEILNYDPHPLIKAPVAV 264


>gi|149179666|ref|ZP_01858171.1| thymidylate synthase [Bacillus sp. SG-1]
 gi|148851858|gb|EDL66003.1| thymidylate synthase [Bacillus sp. SG-1]
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L +HV++ G+++ DRTG GT STFGYQMRFDLS+GFP+LTTKK+H KS++HELL
Sbjct: 1   MKQYLELCKHVLENGTEKGDRTGTGTISTFGYQMRFDLSEGFPMLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW++WAD+ G+LGP+YG QWRSW    G  IDQIS ++++++
Sbjct: 61  WFLNGDTNVKYLQDNGVRIWNDWADETGDLGPVYGKQWRSWEGAGGETIDQISELIENIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRLIVNAWNVGEIDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A+V   + GEF+HT GDVH+Y NH EQ  LQL+R PR+LP + IN ++ D+ 
Sbjct: 181 YALLTMMIANVCDLEPGEFVHTFGDVHIYQNHMEQVKLQLTREPRSLPSIRINKDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           S+ +EDFTL  Y+PH  I   VSV
Sbjct: 241 SYSFEDFTLEDYDPHPHIKGVVSV 264


>gi|2624566|pdb|1AIQ|A Chain A, Crystal Structure Of Thymidylate Synthase R126e Mutant
 gi|2624567|pdb|1AIQ|B Chain B, Crystal Structure Of Thymidylate Synthase R126e Mutant
 gi|157829911|pdb|1AJM|A Chain A, Crystal Structure Of Thymidylate Synthase R126e Mutant
          Length = 264

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 199/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP S R IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSERIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|123443517|ref|YP_001007490.1| thymidylate synthase [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|166231744|sp|A1JPC9|TYSY_YERE8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|122090478|emb|CAL13346.1| thymidylate synthase [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 264

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S +VQ L+
Sbjct: 61  WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKSKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A +++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264


>gi|113868661|ref|YP_727150.1| thymidylate synthase [Ralstonia eutropha H16]
 gi|113527437|emb|CAJ93782.1| thymidylate synthase [Ralstonia eutropha H16]
          Length = 282

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+D+ DRTG GTRS FGYQMRFDL  GFP++TTKK+H KS+++ELL
Sbjct: 19  MKQYLDFMRHVYEHGTDKADRTGTGTRSVFGYQMRFDLRAGFPVVTTKKLHLKSIIYELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  HGV+IWDEWAD++GELGP+YG QWRSWP  DG  IDQI+ +V  +R
Sbjct: 79  WFLQGSTNVRWLQEHGVTIWDEWADENGELGPVYGSQWRSWPTPDGRHIDQITDLVAQIR 138

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWNVA I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 139 ANPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 198

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + G+F+ T GD HLYNNHFEQ   QL+R P  LPQ+ I      + 
Sbjct: 199 YALLTHMMAQQTGLEVGDFVWTGGDCHLYNNHFEQVQTQLAREPLALPQLKILRKPDSIF 258

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF L  Y+ HAAI A V+V
Sbjct: 259 DYRYEDFELAGYQSHAAIKAPVAV 282


>gi|83745787|ref|ZP_00942844.1| Thymidylate synthase [Ralstonia solanacearum UW551]
 gi|83727477|gb|EAP74598.1| Thymidylate synthase [Ralstonia solanacearum UW551]
          Length = 334

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 71  MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 130

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 131 WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 190

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 191 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 250

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       G+F+ T GD HLYNNHFEQ + QL+R+P  LP++ I      + 
Sbjct: 251 YALLTHMIAQQTSLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIF 310

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+ HAAI A V+V
Sbjct: 311 DYQFEDFEIVGYQSHAAIKAPVAV 334


>gi|53715018|ref|YP_101010.1| thymidylate synthase [Bacteroides fragilis YCH46]
 gi|62901263|sp|Q64PV5|TYSY_BACFR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|52217883|dbj|BAD50476.1| thymidylate synthase [Bacteroides fragilis YCH46]
          Length = 264

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G ++ DRTG GT S FG+QMRF+L +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLDRVLTEGIEKGDRTGTGTISVFGHQMRFNLDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD+ G+LG IYG QWRSWP YDG  IDQIS  V +++
Sbjct: 61  WFLKGDTNVKYLQDHGVRIWNEWADETGDLGHIYGYQWRSWPTYDGGFIDQISEAVDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++DF L +Y+PH  I  KV+V
Sbjct: 241 DFQFKDFELVNYDPHPHIAGKVAV 264


>gi|261416896|ref|YP_003250579.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261373352|gb|ACX76097.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327357|gb|ADL26558.1| thymidylate synthase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 270

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 175/270 (64%), Positives = 217/270 (80%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +I  G DR DRTG GTRS FG Q RFDLSKGFP LTTKK+H +S++HELL
Sbjct: 1   MQQYLDLLKDIIDNGVDRSDRTGTGTRSVFGRQTRFDLSKGFPCLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH + V+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++ SL+
Sbjct: 61  WFLKGDTNIKYLHDNKVTIWDEWADENGDLGPVYGHQWRSWPTPDGGHIDQIANLINSLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGI 174
            +P SRRH+V AWNVA +DKMALPPCHCLFQFYV         KLSCQLYQRS D+FLG+
Sbjct: 121 NNPDSRRHLVCAWNVAEVDKMALPPCHCLFQFYVGGVGASGKRKLSCQLYQRSADMFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASYSLLTMMLA V G++ GEF+HT GD+HLY+NHF+QA  QLSR+PR LP M +NP
Sbjct: 181 PFNIASYSLLTMMLAQVCGYEAGEFVHTFGDLHLYSNHFDQAREQLSRTPRALPTMKMNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           ++ DL +F++EDF L +Y+P   I A ++V
Sbjct: 241 DVKDLFNFKFEDFELVNYDPWPTIKAPIAV 270


>gi|21730590|pdb|1KZJ|A Chain A, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
 gi|21730591|pdb|1KZJ|B Chain B, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
 gi|21730592|pdb|1KZJ|C Chain C, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
 gi|21730593|pdb|1KZJ|D Chain D, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
 gi|21730594|pdb|1KZJ|E Chain E, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
 gi|21730595|pdb|1KZJ|F Chain F, Crystal Structure Of Ects W80gDUMPCB3717 COMPLEX
          Length = 264

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 199/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+I DEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIGDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|300724836|ref|YP_003714161.1| thymidylate synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|62901326|sp|Q6REU8|TYSY_XENNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|46102543|gb|AAS80323.1| thymidylate synthetase [Xenorhabdus nematophila]
 gi|297631378|emb|CBJ92073.1| thymidylate synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 264

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GTRS FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTAKDDRTGTGTRSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YLH +GVSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ++ +++ L+
Sbjct: 61  WFLNGDTNIKYLHDNGVSIWDEWADENGDLGPVYGKQWRAWGSADGRHIDQLTQVLEQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 GDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLYNNH EQ  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCNLDVGDFVWTGGDTHLYNNHLEQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+P+  I A V++
Sbjct: 241 DYRFEDFEIVDYDPYPGIKAPVAI 264


>gi|261406249|ref|YP_003242490.1| thymidylate synthase [Paenibacillus sp. Y412MC10]
 gi|261282712|gb|ACX64683.1| thymidylate synthase [Paenibacillus sp. Y412MC10]
          Length = 264

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 150/264 (56%), Positives = 192/264 (72%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+ ++  G ++ DRTG GT S FG Q+RFDLS+GFPL+TTK++H KSVVHELL
Sbjct: 1   MKQYLELLQDILDHGVEKGDRTGTGTLSVFGRQLRFDLSQGFPLMTTKRIHLKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N+ YL  +GV IWDEWAD++G+LGP+YG QWR+W   DG  IDQI+ ++ S++
Sbjct: 61  WFLSGETNIRYLKENGVRIWDEWADENGDLGPVYGSQWRAWETPDGRHIDQIAGVIDSIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA ID M LPPCH +FQFYV  GKLSC L  RS D FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVAEIDNMKLPPCHFVFQFYVAGGKLSCMLTMRSVDSFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GEFI + GDVH+Y+NH EQ   QL R P  LP+++I      + 
Sbjct: 181 YALLTHMVAQQCDLEPGEFIWSGGDVHIYSNHMEQVRTQLEREPYALPKLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF    Y+ H  I A V+V
Sbjct: 241 DYTFEDFEFEGYQYHPTIKATVAV 264


>gi|20150422|pdb|1JG0|A Chain A, Crystal Structure Of Escherichia Coli Thymidylate Synthase
           Complexed With 2'-Deoxyuridine-5'-Monophosphate And N,O-
           Didansyl-L-Tyrosine
 gi|20150423|pdb|1JG0|B Chain B, Crystal Structure Of Escherichia Coli Thymidylate Synthase
           Complexed With 2'-Deoxyuridine-5'-Monophosphate And N,O-
           Didansyl-L-Tyrosine
          Length = 264

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 199/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + D TG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDATGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGAHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|93279927|pdb|2G8M|A Chain A, Escherichia Coli Thymidylate Synthase Y209w In Complex
           With Substrate, Dump, And A Cofactor Analog, Cb3717
 gi|93279928|pdb|2G8M|B Chain B, Escherichia Coli Thymidylate Synthase Y209w In Complex
           With Substrate, Dump, And A Cofactor Analog, Cb3717
 gi|93279931|pdb|2G8X|A Chain A, Escherichia Coli Y209w Apoprotein
 gi|93279932|pdb|2G8X|B Chain B, Escherichia Coli Y209w Apoprotein
          Length = 264

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 200/263 (76%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HL++NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLWSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|238787265|ref|ZP_04631064.1| Thymidylate synthase [Yersinia frederiksenii ATCC 33641]
 gi|238724527|gb|EEQ16168.1| Thymidylate synthase [Yersinia frederiksenii ATCC 33641]
          Length = 264

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLAEGTAKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S++VQ L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVAEGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLIHMMAQQCDLAVGDFVWTGGDTHLYSNHIEQTQLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A +++
Sbjct: 241 DYRFEDFEIEGYDPHPGIKAPIAI 264


>gi|269138061|ref|YP_003294761.1| thymidylate synthase [Edwardsiella tarda EIB202]
 gi|267983721|gb|ACY83550.1| thymidylate synthase [Edwardsiella tarda EIB202]
 gi|304558105|gb|ADM40769.1| Thymidylate synthase [Edwardsiella tarda FL6-60]
          Length = 264

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRKVLAEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++NV YLH + V+IWDEWAD++G+LGP+YG QWR+W   DG  +DQI  +++ LR
Sbjct: 61  WFLNGETNVKYLHENNVTIWDEWADENGDLGPVYGKQWRAWGCADGRQVDQIRQVMEQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A  +  Q G+F+ T GD HLY+NH EQ  LQL+R PR LP++++      + 
Sbjct: 181 YALLVHMMAQQLDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRALPRLVLARRPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V+V
Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAV 264


>gi|153009122|ref|YP_001370337.1| thymidylate synthase [Ochrobactrum anthropi ATCC 49188]
 gi|166231721|sp|A6WZV4|TYSY_OCHA4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|151561010|gb|ABS14508.1| Thymidylate synthase [Ochrobactrum anthropi ATCC 49188]
          Length = 264

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G+DR DRTG GTRS FGYQMRF+L +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDNGTDRGDRTGTGTRSVFGYQMRFNLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GVSIWDEWADK+G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 61  WFLKGDTNIAYLKENGVSIWDEWADKNGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 GNPNSRRLIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y NHF+QA LQL+R P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVAGLKPGEFIHTLGDAHIYANHFDQARLQLTRIPKKLPTMWINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFQLEGYEADPTIKAPIAV 264


>gi|154491774|ref|ZP_02031400.1| hypothetical protein PARMER_01390 [Parabacteroides merdae ATCC
           43184]
 gi|154088015|gb|EDN87060.1| hypothetical protein PARMER_01390 [Parabacteroides merdae ATCC
           43184]
          Length = 264

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V++ G  + DRTG GT S FG+QMRF+L  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLELLDRVLREGVKKEDRTGTGTYSVFGHQMRFNLEDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N  YL  HGV IW+EWAD DG LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLQGDTNAKYLQEHGVRIWNEWADPDGNLGHIYGFQWRSWPDYKGGNIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D M LPPCH  FQFYV NG+LS Q+YQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVADLDNMNLPPCHAFFQFYVANGRLSLQMYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHLEQVKLQLTRDPRPLPRMEINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+PH  I  +V+V
Sbjct: 241 GFQYEDFNLTGYDPHPHIKGEVAV 264


>gi|27574165|pdb|1NCE|A Chain A, Crystal Structure Of A Ternary Complex Of E. Coli
           Thymidylate Synthase D169c With Dump And The Antifolate
           Cb3717
 gi|27574166|pdb|1NCE|B Chain B, Crystal Structure Of A Ternary Complex Of E. Coli
           Thymidylate Synthase D169c With Dump And The Antifolate
           Cb3717
          Length = 264

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 199/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS  VFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCCVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|114570577|ref|YP_757257.1| thymidylate synthase [Maricaulis maris MCS10]
 gi|114341039|gb|ABI66319.1| thymidylate synthase [Maricaulis maris MCS10]
          Length = 285

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 160/261 (61%), Positives = 199/261 (76%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL LLR +++ G+++ DRTGVGT S FG Q+R DLSKGFPLLTTKKVH+KS+  ELLWFL
Sbjct: 25  YLALLRDILENGAEQADRTGVGTMSVFGRQLRCDLSKGFPLLTTKKVHFKSIAIELLWFL 84

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV +L   GV IWDEWAD++G+LGP+YG QWR W   DG  IDQ+S+I++ +R +P
Sbjct: 85  RGETNVRWLQERGVKIWDEWADENGDLGPVYGKQWRRWEGPDGTEIDQLSNILEQIRNNP 144

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVS WN A +  MALPPCH L+QF V  GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 145 ASRRLIVSGWNPADVPNMALPPCHTLYQFNVAGGKLSCQLYQRSADMFLGVPFNIASYAL 204

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A V G + GE+IHT GD H+Y+NH +Q   QLSR+PR LPQ+ +NP+  DL  F 
Sbjct: 205 LTAMVAQVCGLEPGEYIHTFGDAHIYSNHMDQVREQLSRAPRALPQLKLNPDATDLFGFE 264

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  L  Y+PH  I A V+V
Sbjct: 265 YEDIALEGYDPHPRITAPVAV 285


>gi|119899486|ref|YP_934699.1| thymidylate synthase [Azoarcus sp. BH72]
 gi|166231687|sp|A1KAF7|TYSY_AZOSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119671899|emb|CAL95813.1| thymidylate synthase [Azoarcus sp. BH72]
          Length = 264

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV++ G  + DRTG GT S FG+QMRF L++GFPLLTTKK+H +S++HELL
Sbjct: 1   MQQYLDLMRHVLEHGDRKTDRTGTGTVSVFGWQMRFRLAEGFPLLTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RGD+N+ YL  HGVSIWDEWAD++G+LGP+YG QWR W   DG  +DQ++ ++  ++
Sbjct: 61  WFIRGDTNIRYLKDHGVSIWDEWADENGDLGPVYGKQWRRWETADGRSVDQLAQLIDGIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN   +  MALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRHIVSAWNPGEVGSMALPPCHALFQFYVAGGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+F+ T GD HLY NH +QA+ QL R+P  LP+MI+NP + DL 
Sbjct: 181 YALLTMMVAQVCDLEPGDFVWTGGDCHLYLNHLQQAEEQLQRTPYPLPRMILNPEVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDFTL  Y  H  I A V+V
Sbjct: 241 AFRFEDFTLEGYTAHPHIKAPVAV 264


>gi|260462156|ref|ZP_05810400.1| thymidylate synthase [Mesorhizobium opportunistum WSM2075]
 gi|259032016|gb|EEW33283.1| thymidylate synthase [Mesorhizobium opportunistum WSM2075]
          Length = 264

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 172/264 (65%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV++ G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL
Sbjct: 1   MRQYLDLLQHVLENGADRGDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+++++ +R
Sbjct: 61  WFLAGDTNIKYLTDNGVSIWDEWADENGDLGPVYGKQWRSWPDGHGGSIDQIANLLKEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++ MALPPCHC+FQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCMFQFYVSEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA  QL R+PR LP M INP + DL 
Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLRRTPRALPTMWINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L +Y   A+I A ++V
Sbjct: 241 AFRFEDFRLENYVADASIKAPIAV 264


>gi|326201561|ref|ZP_08191432.1| LOW QUALITY PROTEIN: thymidylate synthase [Clostridium
           papyrosolvens DSM 2782]
 gi|325988161|gb|EGD48986.1| LOW QUALITY PROTEIN: thymidylate synthase [Clostridium
           papyrosolvens DSM 2782]
          Length = 264

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL +H++  G  + DRTG GT STFGYQMRFDL KGFPLLTTK +H KS++HELL
Sbjct: 1   MQQYLDLCKHILNNGIKKEDRTGTGTISTFGYQMRFDLQKGFPLLTTKNLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSW   DG  IDQ+  +++ ++
Sbjct: 61  WFISGETNIKYLKENGVSIWDEWADENGDLGPVYGHQWRSWSTPDGRSIDQLKGVLEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVS+WNV+ I+KMALPPCHC +QFYV NG LSC LYQRS DVF+G+PFNIAS
Sbjct: 121 NNPDSRRLIVSSWNVSDIEKMALPPCHCFYQFYVINGTLSCMLYQRSADVFIGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+L TMM+A   G + GEF+HTLGD H+Y NH EQ +LQLSR  R LP+M INP++ DL 
Sbjct: 181 YALFTMMIAQSCGLKAGEFVHTLGDAHIYLNHIEQVNLQLSRDTRALPKMNINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+Y DFTL  Y+PH  I   V+V
Sbjct: 241 DFKYSDFTLTDYDPHPNIKGAVAV 264


>gi|284037715|ref|YP_003387645.1| thymidylate synthase [Spirosoma linguale DSM 74]
 gi|283817008|gb|ADB38846.1| thymidylate synthase [Spirosoma linguale DSM 74]
          Length = 264

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLRH++  G+ + DRTG GT S FGYQMRF+L +GFPLLTTKKVH KS++HELL
Sbjct: 1   MQQYHDLLRHILANGTRKTDRTGTGTISVFGYQMRFNLQEGFPLLTTKKVHTKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSW    G VIDQ+  +++ L+
Sbjct: 61  WFIKGDTNIKYLKDNGVSIWDEWADENGDLGPVYGKQWRSWAGPQGQVIDQLQDVLRQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR I+SAWN A +  MALPPCH L QFYV + KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NTPDSRRIIISAWNPADVPSMALPPCHLLMQFYVADNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G +  EFI T GD HLY NH EQ + QL+R  R LP M +NP++  + 
Sbjct: 181 YALLTMMIAQECGLEAHEFIWTGGDTHLYLNHLEQVETQLARDFRPLPTMRLNPDVRSVF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y DFTL +Y PH AI A V+V
Sbjct: 241 DFTYADFTLENYNPHPAIKAPVAV 264


>gi|295400392|ref|ZP_06810371.1| thymidylate synthase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312111082|ref|YP_003989398.1| thymidylate synthase [Geobacillus sp. Y4.1MC1]
 gi|294977667|gb|EFG53266.1| thymidylate synthase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311216183|gb|ADP74787.1| thymidylate synthase [Geobacillus sp. Y4.1MC1]
          Length = 264

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 150/264 (56%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +++ G  + DRTG+GT S FG Q+RF+L +GFPLLTTKK+H +S+++ELL
Sbjct: 1   MRQYLDLLQDILENGVPKEDRTGIGTFSVFGRQLRFNLQEGFPLLTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  +GV+IWDEWAD++G+LGP+YG QWRSW   DG  +DQIS +++ ++
Sbjct: 61  WFLRGDTNIRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQISWVIEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWNVA +D+M LPPCH  FQFYV +GKLSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPNSRRLLVNAWNVAELDEMKLPPCHYAFQFYVADGKLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   GE I + GDVHLY NH EQA LQL+R PR LP+++I      + 
Sbjct: 181 YALLTHMIAQQCGLDVGELIFSGGDVHLYKNHIEQAKLQLTREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+PH  I A V+V
Sbjct: 241 EYKFEDFEIVGYDPHPHIKAPVAV 264


>gi|157692684|ref|YP_001487146.1| thymidylate synthase [Bacillus pumilus SAFR-032]
 gi|166991227|sp|A8FEB9|TYSY_BACP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157681442|gb|ABV62586.1| thymidylate synthase B [Bacillus pumilus SAFR-032]
          Length = 264

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L RHV++ G ++ DRTG GT STFGYQMRFDL +GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYKELCRHVLQHGDEKGDRTGTGTISTFGYQMRFDLQEGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELG +YG QWRSW   DG  +DQI+ ++  + 
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGELGRVYGAQWRSWASGDGETVDQITKLIHDIE 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   ID+MALPPCHCLFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPNSRRLIVSAWNPGEIDQMALPPCHCLFQFYVSNGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEF+HTLGD H+Y NH  Q ++QL R  R LPQ+ I  ++  + 
Sbjct: 181 YALLTMMIAKVTNLEPGEFVHTLGDAHIYQNHLPQVNMQLEREERALPQLRITRDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L +Y+PH  I  +VSV
Sbjct: 241 DFTFDDFVLENYDPHPHIKGEVSV 264


>gi|224536152|ref|ZP_03676691.1| hypothetical protein BACCELL_01018 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522234|gb|EEF91339.1| hypothetical protein BACCELL_01018 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 264

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G  + DRTG GT S FG+QMRF++  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGVHKEDRTGTGTISVFGHQMRFNMEDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  HGV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  V+++ 
Sbjct: 61  WFLNGDTNAKYLQDHGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGSIDQISEAVETIL 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I+ M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDINNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y+PH  I  KVSV
Sbjct: 241 DFQYEDFELVNYDPHPHIAGKVSV 264


>gi|215794567|pdb|3BFI|A Chain A, E. Coli Thymidylate Synthase Y209m Mutant Complexed With
           5- Nitro-Dump
          Length = 264

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 199/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HL +NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLMSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|302877663|ref|YP_003846227.1| thymidylate synthase [Gallionella capsiferriformans ES-2]
 gi|302580452|gb|ADL54463.1| thymidylate synthase [Gallionella capsiferriformans ES-2]
          Length = 264

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L++HV+  G+ + DRTG GT S FGYQMRFDL++GFPL+TTKK H KS++HELL
Sbjct: 1   MRTYLNLMQHVLDNGTKKSDRTGTGTVSVFGYQMRFDLAQGFPLVTTKKCHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N+ YL  HGV IWDEWAD+ G+LGP+YG QWRSW   DG VIDQI   V  L+
Sbjct: 61  WFLQGYTNIGYLKEHGVKIWDEWADEHGDLGPVYGHQWRSWEAVDGRVIDQIKIAVDQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVSEGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   + G+F+HT GD HLY NH EQ  LQLSR P  LP M INP++ D+ 
Sbjct: 181 YALLTLMMAQVCNLEPGDFVHTFGDAHLYLNHLEQTQLQLSREPHPLPMMHINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDFTL  Y+PH AI  KV+V
Sbjct: 241 SFKYEDFTLTGYDPHPAIKGKVAV 264


>gi|218264414|ref|ZP_03478271.1| hypothetical protein PRABACTJOHN_03967 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222017|gb|EEC94667.1| hypothetical protein PRABACTJOHN_03967 [Parabacteroides johnsonii
           DSM 18315]
          Length = 264

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V++ G  + DRTG GT S FG+QMRF+L  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLELLDRVLREGVKKEDRTGTGTYSVFGHQMRFNLEDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N  YL +HGV IW+EWAD DG LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLQGDTNAKYLQKHGVRIWNEWADPDGNLGHIYGFQWRSWPDYKGGSIDQISEAVKTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS Q+YQRS D+FLG+PFNIAS
Sbjct: 121 QNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQMYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQL+R PR LP+M INP + D+ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHLEQVKLQLTRDPRPLPRMEINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+PH  I  +V+V
Sbjct: 241 GFQYEDFNLTGYDPHPHIKGEVAV 264


>gi|259090368|pdb|3IX6|A Chain A, Crystal Structure Of Thymidylate Synthase Thya From
           Brucella Melitensis
 gi|259090369|pdb|3IX6|B Chain B, Crystal Structure Of Thymidylate Synthase Thya From
           Brucella Melitensis
          Length = 360

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 97  MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 156

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 157 WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 216

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 217 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 276

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL 
Sbjct: 277 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 336

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 337 AFRFEDFRLDGYEADPTIKAPIAV 360


>gi|326800370|ref|YP_004318189.1| Thymidylate synthase [Sphingobacterium sp. 21]
 gi|326551134|gb|ADZ79519.1| Thymidylate synthase [Sphingobacterium sp. 21]
          Length = 273

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 170/273 (62%), Positives = 214/273 (78%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV + G D++DRTG GTRS FGYQMRF+L +GFPL+TTKK+H +S++HEL+
Sbjct: 1   MQQYLDLMRHVYEHGVDKQDRTGTGTRSVFGYQMRFNLQEGFPLVTTKKLHLRSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+SYL  + VSIWDEWAD++G LGP+YG QWRSWP  DG  IDQI+ ++  L+
Sbjct: 61  WFLKGETNISYLKENKVSIWDEWADENGNLGPVYGSQWRSWPTPDGKHIDQIAQVIHQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG---------KLSCQLYQRSGDVF 171
            +P SRR IVSAWNVA I+KMALPPCH  FQFYV            +LSCQLYQRS D+F
Sbjct: 121 NNPDSRRIIVSAWNVAEIEKMALPPCHAFFQFYVAPPNKEKGQTKAQLSCQLYQRSADIF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V   +  +FIHTLGD HLY+NH EQA LQL+R+P++LP++ 
Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEAADFIHTLGDAHLYSNHLEQATLQLTRTPKSLPKLK 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           INP I  +  FRYEDFTL  Y+PH  I A+V+V
Sbjct: 241 INPEIKSIFDFRYEDFTLVDYDPHPHIKAEVAV 273


>gi|138895327|ref|YP_001125780.1| thymidylate synthase [Geobacillus thermodenitrificans NG80-2]
 gi|166231703|sp|A4INY1|TYSY_GEOTN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|134266840|gb|ABO67035.1| Thymidylate synthase,TS, TSase [Geobacillus thermodenitrificans
           NG80-2]
          Length = 264

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/264 (57%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL  +++ G ++ DRTGVGT S FG Q+RF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 1   MRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGP+YG QWRSW   DG  +DQI+S+V+ ++
Sbjct: 61  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQIASVVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWNVA +DKM LPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPNSRRLLVNAWNVAELDKMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   GE I T GDVHLY NH EQA LQL+R PR LP++++      + 
Sbjct: 181 YALLTHMIAEQCGLDVGELIFTGGDVHLYKNHIEQAKLQLTREPRPLPKLVLKRKPSSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF +  Y+PH  I A V+V
Sbjct: 241 DYEYDDFEIVGYDPHPTIKAPVAV 264


>gi|189468577|ref|ZP_03017362.1| hypothetical protein BACINT_04980 [Bacteroides intestinalis DSM
           17393]
 gi|189436841|gb|EDV05826.1| hypothetical protein BACINT_04980 [Bacteroides intestinalis DSM
           17393]
          Length = 264

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G  + DRTG GT S FG+QMRF++ +GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGIHKEDRTGTGTISVFGHQMRFNMDEGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  HGV IW+EWAD++GELG IYG QWRSWPDY G  IDQIS  V+++ 
Sbjct: 61  WFLNGDTNAKYLQDHGVRIWNEWADENGELGHIYGYQWRSWPDYKGGSIDQISEAVETIL 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLDNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A + G + G+FIHTLGD H+Y NH EQ  LQLSR PR LPQM INP++  + 
Sbjct: 181 YALLLQMMAQITGLKAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y+PH  I  KVSV
Sbjct: 241 DFQYEDFELVNYDPHPHIAGKVSV 264


>gi|300692074|ref|YP_003753069.1| thymidylate synthetase [Ralstonia solanacearum PSI07]
 gi|299079134|emb|CBJ51802.1| thymidylate synthetase [Ralstonia solanacearum PSI07]
          Length = 264

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHSKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 61  WFLQGATNVRWLQENGVTIWDEWADADGELGPIYGYQWRSWPTPTGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD HLYNNHFEQ + QL+R P  LP++ I      + 
Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLAREPLPLPKLHIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF +  Y+ HAAI A V+V
Sbjct: 241 DYQYEDFEIVGYQSHAAIKAPVAV 264


>gi|194017003|ref|ZP_03055616.1| thymidylate synthase [Bacillus pumilus ATCC 7061]
 gi|194011609|gb|EDW21178.1| thymidylate synthase [Bacillus pumilus ATCC 7061]
          Length = 264

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L RHV++ G ++ DRTG GT STFGYQMRFDL +GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYKELCRHVLQHGDEKGDRTGTGTISTFGYQMRFDLQEGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELG +YG QWRSW   DG  +DQI+ ++  + 
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGELGRVYGAQWRSWASGDGETVDQITKLIHDIE 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ID+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPNSRRLIVSAWNPAEIDQMALPPCHCLFQFYVSHGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + GEF+HTLGD H+Y NH  Q  +QL R  RTLPQ+ I  ++  + 
Sbjct: 181 YALLTMMIAKVTNLEPGEFVHTLGDAHIYQNHLPQVKMQLEREERTLPQLRITRDVKSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L +Y+PH  I  +VSV
Sbjct: 241 DFTFDDFVLENYDPHPHIKGEVSV 264


>gi|323143173|ref|ZP_08077870.1| thymidylate synthase [Succinatimonas hippei YIT 12066]
 gi|322417060|gb|EFY07697.1| thymidylate synthase [Succinatimonas hippei YIT 12066]
          Length = 264

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+R +++ G DR DRTG GTRS FG QMRFDL+KGFPLLTTKKVH +S++HELL
Sbjct: 1   MKIYLDLMRRILEEGVDRSDRTGTGTRSIFGTQMRFDLNKGFPLLTTKKVHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSW   DG VIDQIS+ V  ++
Sbjct: 61  WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGKQWRSWAAPDGKVIDQISNAVDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++KMALPPCH LFQFYV NGKLSC LYQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNPADVEKMALPPCHALFQFYVANGKLSCLLYQRSCDFFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLTMM+A       G+F+ T GD HLY+NHFEQA LQLSR+PR LP M+I      + 
Sbjct: 181 YSLLTMMMAKECDLGLGDFVWTGGDTHLYSNHFEQAHLQLSRTPRALPTMLIKRKAPSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF L +Y+P+  I A V+V
Sbjct: 241 DYKYEDFELINYDPYPVIKAPVAV 264


>gi|42524608|ref|NP_969988.1| thymidylate synthase [Bdellovibrio bacteriovorus HD100]
 gi|62901320|sp|Q6MID2|TYSY_BDEBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|39576818|emb|CAE78047.1| thyA [Bdellovibrio bacteriovorus HD100]
          Length = 264

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ V++ G  + DRTG GT S FGYQMR++L +GFPLLTTKK+H +S+ HELL
Sbjct: 1   MKQYHDLIKTVLEHGVKKEDRTGTGTISMFGYQMRYNLQEGFPLLTTKKLHTRSIFHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YLH + V+IWDEWAD++G LGP+YG QWRSW   DG  IDQI+++V+ ++
Sbjct: 61  WFLKGETNIKYLHDNKVTIWDEWADENGNLGPVYGKQWRSWETADGRTIDQITNVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V A+N   +DKMALPPCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPNSRRMLVVAFNPGDVDKMALPPCHAFFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + G+F+HTLGD HLY NH EQA+LQL+R  R LPQ+ +NP   DL 
Sbjct: 181 YALLTHMIAQVCDLEVGDFVHTLGDAHLYLNHLEQANLQLTREFRPLPQLKLNPAKKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YED  +  Y+PH AI A+V+V
Sbjct: 241 DFTYEDIEIIGYDPHPAIKAEVAV 264


>gi|320539709|ref|ZP_08039373.1| thymidylate synthetase [Serratia symbiotica str. Tucson]
 gi|320030321|gb|EFW12336.1| thymidylate synthetase [Serratia symbiotica str. Tucson]
          Length = 264

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 150/264 (56%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMNKVLAEGTSKADRTGTGTLSIFGHQMRFNLQEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  + V+IWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S+++Q L+
Sbjct: 61  WFLNGDTNVAYLRENNVTIWDEWADENGDLGPVYGKQWRAWGATDGRQIDQLSNVLQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  + +MAL PCH   QFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QEPDSRRIIVSAWNVGELGQMALAPCHAFVQFYVAGGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQL+R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCYLEVGDFVWTGGDTHLYSNHMEQTQLQLTREPRPLPKLVIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +ED  +  Y+PH AI A V++
Sbjct: 241 DYCFEDLAIEGYDPHPAIKAPVAI 264


>gi|17545666|ref|NP_519068.1| thymidylate synthase [Ralstonia solanacearum GMI1000]
 gi|22096223|sp|Q8Y0U6|TYSY_RALSO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|17427959|emb|CAD14649.1| probable thymidylate synthase (ts) (tsase) protein [Ralstonia
           solanacearum GMI1000]
          Length = 264

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MQPYLDLMRHVHEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD +GELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 61  WFLQGATNVRWLRENGVTIWDEWADAEGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVADIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD HLYNNHFEQ + QL+R+P  LP++ I      + 
Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF +  YE H AI A V+V
Sbjct: 241 DYRYEDFEIVGYESHPAIKAPVAV 264


>gi|319786162|ref|YP_004145637.1| thymidylate synthase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464674|gb|ADV26406.1| thymidylate synthase [Pseudoxanthomonas suwonensis 11-1]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL HV+  G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLELLAHVLGHGTDKPDRTGTGTRSVFGWQMRFDLRQGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  + VSIWDEWAD  GELGP+YG QWR W   DG+ IDQI  +V+ ++
Sbjct: 61  WFLKGETNIAYLKENKVSIWDEWADGQGELGPVYGKQWRRWTGSDGSEIDQIRWVVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + KMAL PCH LFQFYV +G+LSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLLVSAWNVADLPKMALMPCHTLFQFYVADGRLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QLSR PR LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLQLNPEVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYED  +  Y+P  AI A V+V
Sbjct: 241 DFRYEDIAIEGYDPAPAIKAPVAV 264


>gi|319782912|ref|YP_004142388.1| thymidylate synthase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168800|gb|ADV12338.1| thymidylate synthase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 175/264 (66%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV+  G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL
Sbjct: 1   MRQYLDLLQHVLDNGADRGDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  HGVSIWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+++++ +R
Sbjct: 61  WFLAGDTNIKYLTDHGVSIWDEWADENGDLGPVYGKQWRSWPDGHGGSIDQIANLLKEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++ MALPPCHCLFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSQGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA  QL R+PRTLP M INP + DL 
Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLRRTPRTLPTMWINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L +Y   A+I A ++V
Sbjct: 241 AFRFEDFRLENYVADASIKAPIAV 264


>gi|238792783|ref|ZP_04636414.1| Thymidylate synthase [Yersinia intermedia ATCC 29909]
 gi|238727891|gb|EEQ19414.1| Thymidylate synthase [Yersinia intermedia ATCC 29909]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S++V+ L+
Sbjct: 61  WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRKIDQLSNVVKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +++MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELEQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ +LQLSR PR LP++II      L 
Sbjct: 181 YALLVHMMAQQCELDVGDFVWTGGDTHLYSNHIEQTNLQLSREPRALPKLIIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A +++
Sbjct: 241 DYRFEDFDIEGYDPHPGIKAPIAI 264


>gi|217035336|pdb|3BGX|A Chain A, E. Coli Thymidylate Synthase C146s Mutant Complexed With
           Dtmp And Mtf
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 199/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL P H  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|325269975|ref|ZP_08136584.1| thymidylate synthase [Prevotella multiformis DSM 16608]
 gi|324987698|gb|EGC19672.1| thymidylate synthase [Prevotella multiformis DSM 16608]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  ++  G  + DRTG GT S FG QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLNLLDRILTEGIQKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G LGP+YG QWRSWPDY G  IDQI ++V+ +R
Sbjct: 61  WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQIKNVVEMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 NNPNSRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEF+HT GD HLY NH EQA LQL+R P  LP+M INP + D+ 
Sbjct: 181 YALLLQMMAQVTGLEAGEFVHTTGDTHLYLNHLEQARLQLTREPHPLPKMKINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF YEDF L  Y P   I A+VSV
Sbjct: 241 SFEYEDFELTDYHPWPHISAEVSV 264


>gi|325860307|ref|ZP_08173429.1| thymidylate synthase [Prevotella denticola CRIS 18C-A]
 gi|325482186|gb|EGC85197.1| thymidylate synthase [Prevotella denticola CRIS 18C-A]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  ++  G+++ DRTG GT S FG QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLNLLNCILTEGAEKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G LGP+YG QWRSWPDY G  IDQIS++V+ +R
Sbjct: 61  WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQISNVVEMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HCPESRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFRYEDF L  Y P   I A+V+V
Sbjct: 241 SFRYEDFELTDYHPWPHISAEVAV 264


>gi|299066921|emb|CBJ38116.1| thymidylate synthetase [Ralstonia solanacearum CMR15]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MQPYLDLMRHVHEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD +GELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 61  WFLQGATNVRWLRENGVTIWDEWADAEGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD HLYNNHFEQ + QL+R+P  LP++ I      + 
Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF +  YE H AI A V+V
Sbjct: 241 DYRYEDFEIVGYESHPAIKAPVAV 264


>gi|299131893|ref|ZP_07025088.1| thymidylate synthase [Afipia sp. 1NLS2]
 gi|298592030|gb|EFI52230.1| thymidylate synthase [Afipia sp. 1NLS2]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL  ++  G+ + DRTG GT S FG+QMRF+L+ GFP+ TTKK+ +K++VHELL
Sbjct: 1   MHQYHDLLERILSDGAQKGDRTGTGTLSVFGHQMRFNLAAGFPMTTTKKLPFKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV+IWDEWAD +G+LGP+YG QWRSW   DG  IDQI+++++ +R
Sbjct: 61  WFLAGDTNVRYLQNNGVTIWDEWADANGDLGPVYGKQWRSWQAPDGRSIDQIANLIRMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A +D MALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TTPDSRRLIVSAWNPADVDHMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V     G+FIHTLGD HLY+NH EQA LQL+R PR LP + INP + D+ 
Sbjct: 181 YALLTMMIAQVTDLAPGDFIHTLGDAHLYSNHLEQARLQLTRRPRALPAVHINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L +Y+PH  I A+V+V
Sbjct: 241 GFRYEDFKLENYDPHPHIKAEVAV 264


>gi|319779101|ref|YP_004130014.1| Thymidylate synthase [Taylorella equigenitalis MCE9]
 gi|317109125|gb|ADU91871.1| Thymidylate synthase [Taylorella equigenitalis MCE9]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D +RHV + G D+ DRTG GT+S F YQMRFDL +GFP++TTKK+H KS+++ELL
Sbjct: 1   MRQYEDFMRHVFETGVDKTDRTGTGTKSVFAYQMRFDLQEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSN  +L   GVSIW+EWAD++GELGPIYGVQWRSWP  DG  IDQIS +V  ++
Sbjct: 61  WFLRGDSNAKWLQERGVSIWNEWADENGELGPIYGVQWRSWPAPDGTKIDQISQVVDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV LI +M LPPCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGLIPQMKLPPCHAFFQFYVAEGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A       GEFI T GD H+Y+NHFEQ   QLSR P   P++ I      + 
Sbjct: 181 YSLLTHMIAQQCNLDVGEFIWTGGDCHIYSNHFEQVKEQLSRDPYPYPKLHIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+ H  I A V+V
Sbjct: 241 DYEFEDFEVMDYQHHPHIKAPVAV 264


>gi|256425405|ref|YP_003126058.1| thymidylate synthase [Chitinophaga pinensis DSM 2588]
 gi|256040313|gb|ACU63857.1| thymidylate synthase [Chitinophaga pinensis DSM 2588]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL+H+I  GS + DRTG GT S FG Q+RF+L +GFP++TTKKVH KS+++ELL
Sbjct: 1   MEQYLKLLQHIIDQGSVKTDRTGTGTTSCFGAQLRFNLQEGFPMVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  HGVSIWDEWAD++G+LGP+YG QWRSW   DG VIDQI+  V++++
Sbjct: 61  WFLNGDTNIKYLKDHGVSIWDEWADENGDLGPVYGKQWRSWETKDGKVIDQITEAVKTIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNV  +  MAL PCHCLFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPDSRRIIVNAWNVGDLPDMALSPCHCLFQFYVAEGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y++LTMM+A V   + G+F+HT GDVHLY+NH EQA LQLSR P  LP + INP + D+ 
Sbjct: 181 YAILTMMMAQVCDLEPGDFVHTFGDVHLYSNHMEQAKLQLSRQPFELPVLKINPAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+ H  I A V++
Sbjct: 241 GFKFEDFELLNYQHHPHIKAPVAI 264


>gi|241205506|ref|YP_002976602.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240859396|gb|ACS57063.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M I P++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L  YE  A+I A ++V
Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264


>gi|56420311|ref|YP_147629.1| thymidylate synthase [Geobacillus kaustophilus HTA426]
 gi|261419980|ref|YP_003253662.1| thymidylate synthase [Geobacillus sp. Y412MC61]
 gi|297530062|ref|YP_003671337.1| thymidylate synthase [Geobacillus sp. C56-T3]
 gi|319766795|ref|YP_004132296.1| thymidylate synthase [Geobacillus sp. Y412MC52]
 gi|62901180|sp|Q5KZ25|TYSY_GEOKA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|56380153|dbj|BAD76061.1| thymidylate synthetase [Geobacillus kaustophilus HTA426]
 gi|261376437|gb|ACX79180.1| thymidylate synthase [Geobacillus sp. Y412MC61]
 gi|297253314|gb|ADI26760.1| thymidylate synthase [Geobacillus sp. C56-T3]
 gi|317111661|gb|ADU94153.1| thymidylate synthase [Geobacillus sp. Y412MC52]
          Length = 264

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL  +++ G ++ DRTGVGT S FG Q+RF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 1   MRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGPIYG QWRSW   DG  IDQI+ +V+ ++
Sbjct: 61  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTIDQIAWVVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA +D+M LPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPNSRRLLVSAWNVAELDEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       GE I T GDVHLY NH EQA LQL+R PR LP+++I      + 
Sbjct: 181 YALLTHMIAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPPSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF +  Y PH  I A V+V
Sbjct: 241 DYEYDDFEIVGYNPHPTIKAPVAV 264


>gi|319763676|ref|YP_004127613.1| thymidylate synthase [Alicycliphilus denitrificans BC]
 gi|330824059|ref|YP_004387362.1| thymidylate synthase [Alicycliphilus denitrificans K601]
 gi|317118237|gb|ADV00726.1| thymidylate synthase [Alicycliphilus denitrificans BC]
 gi|329309431|gb|AEB83846.1| thymidylate synthase [Alicycliphilus denitrificans K601]
          Length = 271

 Score =  394 bits (1012), Expect = e-108,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 192/264 (72%), Gaps = 1/264 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DL+RHV + G  + DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS++ ELLW
Sbjct: 8   HQYEDLMRHVFEHGVAKGDRTGTGTRSVFGHQMRFDLREGFPLVTTKKVHLKSIILELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           FL+G  N  +L   GV+IWDEWAD   G+LGP+YGVQWRSWP   G  IDQIS +V+ LR
Sbjct: 68  FLQGSGNARWLQERGVTIWDEWADPTSGDLGPVYGVQWRSWPTPGGGHIDQISQVVEQLR 127

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +DKMAL PCH  FQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 128 TNPDSRRIIVSAWNVAELDKMALMPCHAFFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 187

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA     + G+FI T GD H+Y+NHFEQ   QL+R PR  P + I      + 
Sbjct: 188 YALLTHMLAQQCDLEVGDFIWTGGDCHIYSNHFEQVRTQLAREPRPYPTLRIKRRPPSIF 247

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF +  Y+PH  I A V+V
Sbjct: 248 DYGYEDFEVEGYDPHPPIKAPVAV 271


>gi|327313463|ref|YP_004328900.1| thymidylate synthase [Prevotella denticola F0289]
 gi|326946204|gb|AEA22089.1| thymidylate synthase [Prevotella denticola F0289]
          Length = 264

 Score =  393 bits (1011), Expect = e-108,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  ++  G+ + DRTG GT S FG QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQQYLNLLNRILTEGAQKGDRTGTGTLSVFGNQMRFDLRDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G LGP+YG QWRSWPDY G  IDQIS++ + +R
Sbjct: 61  WFLKGDTNVHYLQEHGVRIWNEWADENGNLGPVYGHQWRSWPDYKGGTIDQISNVEEMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +V+AWN A +D+MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HCPESRRMLVTAWNPAEVDEMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY NH EQA LQL+R PR LP+M INP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQAKLQLTREPRPLPKMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFRYEDF L  Y P   I A+V+V
Sbjct: 241 SFRYEDFELADYHPWPHISAEVAV 264


>gi|294478969|gb|ADE87534.1| thymidylate synthase [Deep-sea thermophilic phage D6E]
          Length = 264

 Score =  393 bits (1011), Expect = e-108,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +++ G ++ DRTG GT S FG Q+RF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 1   MKQYLDLLQDILENGVEKEDRTGTGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGPIYG QWRSW   DG  +DQI+++ + ++
Sbjct: 61  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTVDQIAAVFKEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + +M LPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPNSRRLLVSAWNVAKLGEMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       GE I T GDVHLY NH EQA LQL+R PR LP+++I      + 
Sbjct: 181 YALLTHMVAQQCDLDVGELIFTGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPPSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF    Y+PH AI A VSV
Sbjct: 241 DYEYEDFEFVGYDPHPAIKAPVSV 264


>gi|154686429|ref|YP_001421590.1| thymidylate synthase [Bacillus amyloliquefaciens FZB42]
 gi|166231688|sp|A7Z5T3|TYSY_BACA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|154352280|gb|ABS74359.1| ThyB [Bacillus amyloliquefaciens FZB42]
          Length = 264

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS ++  ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ID MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDHMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R  R LP++    N+  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF +  Y+PH  I   VSV
Sbjct: 241 DFTFEDFIIEDYDPHPHIKGAVSV 264


>gi|239827018|ref|YP_002949642.1| thymidylate synthase [Geobacillus sp. WCH70]
 gi|259550783|sp|C5DAR2|TYSY_GEOSW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|239807311|gb|ACS24376.1| thymidylate synthase [Geobacillus sp. WCH70]
          Length = 264

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL  +++ G ++ DRTGVGT S FG Q+RF+L +GFPLLTTKK+H +S+++ELL
Sbjct: 1   MRQYLQLLEDILENGVEKDDRTGVGTLSVFGRQLRFNLQEGFPLLTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGPIYG QWRSW   DG  +DQIS +++ ++
Sbjct: 61  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPIYGAQWRSWKGADGKTVDQISWVIEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA +DKM LPPCH  FQFYV +GKLSC   QRS D FLG+PFNIAS
Sbjct: 121 RNPNSRRLLVSAWNVAELDKMKLPPCHYAFQFYVADGKLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       GE I + GDVHLY NH EQA LQL+R PR LP+++I      + 
Sbjct: 181 YALLTHMIAQQCDLDVGELIFSGGDVHLYKNHLEQAKLQLTREPRPLPKLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+PH  I A V+V
Sbjct: 241 EYEFEDFEIVDYDPHPHIKAPVAV 264


>gi|209884416|ref|YP_002288273.1| thymidylate synthase [Oligotropha carboxidovorans OM5]
 gi|229558058|sp|B6JB67|TYSY_OLICO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|209872612|gb|ACI92408.1| thymidylate synthase [Oligotropha carboxidovorans OM5]
          Length = 264

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL H++  G+++ DRTG GT S FG+QMRFDL+ GFP+LTTKK+ +K++VHELL
Sbjct: 1   MHQYQDLLEHILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKKLPFKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GVSIWDEWAD +G+LGP+YG QWRSW   DG  IDQI+++VQ +R
Sbjct: 61  WFLAGDTNVRYLQNNGVSIWDEWADANGDLGPVYGKQWRSWQAPDGRSIDQITNLVQMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A +++MALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVTAWNPADVEQMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V     G F+HT GD HLY+NH +QA LQL+R+PR LP + INP + D+ 
Sbjct: 181 YALLMMMIAQVTDLAPGHFVHTFGDAHLYSNHLDQARLQLTRAPRALPTLRINPAVRDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L +Y+PH  I A+V+V
Sbjct: 241 GFRYEDFKLENYDPHPHIKAEVAV 264


>gi|325282128|ref|YP_004254670.1| Thymidylate synthase [Odoribacter splanchnicus DSM 20712]
 gi|324313937|gb|ADY34490.1| Thymidylate synthase [Odoribacter splanchnicus DSM 20712]
          Length = 264

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G+++ DRTG GT S FG+QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MRQYLDLLDRILSEGAEKTDRTGTGTISVFGHQMRFDLQAGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD DG+LG IYG QWRSWP  DG  +DQI+ +V  ++
Sbjct: 61  WFLKGDTNVKYLQDHGVKIWNEWADADGDLGHIYGYQWRSWPRPDGTHLDQIAQVVHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   I+ MAL PCH LFQFYV  GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 121 NNPDSRRLIVSAWNAGDIENMALAPCHALFQFYVVGGKLSCQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G Q GEF+HTLGD H+Y NH EQ  LQLSR PR LPQM INP + D+L
Sbjct: 181 YALLTLMMAQVCGLQPGEFVHTLGDAHIYLNHIEQVRLQLSREPRALPQMHINPAVKDIL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH  I   +SV
Sbjct: 241 GFRYEDFELTGYDPHPHIKGAISV 264


>gi|238918743|ref|YP_002932257.1| thymidylate synthase, [Edwardsiella ictaluri 93-146]
 gi|259550777|sp|C5BH86|TYSY_EDWI9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|238868311|gb|ACR68022.1| thymidylate synthase, putative [Edwardsiella ictaluri 93-146]
          Length = 264

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRKVLAEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++NVSYLH + V+IWDEWAD +G+LGP+YG QWR+W   DG  +DQIS +++ LR
Sbjct: 61  WFLNGETNVSYLHENNVTIWDEWADDNGDLGPVYGKQWRAWGCADGRQVDQISQVMEQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MAL PCH  FQFYV +G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QEPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A  +  Q G+F+ T GD HLY+NH EQ  LQL+R PR LP++++      + 
Sbjct: 181 YALLVHMMAQQLDLQVGDFVWTGGDTHLYSNHMEQTALQLTREPRALPRLVLARRPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V+V
Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAV 264


>gi|332285402|ref|YP_004417313.1| thymidylate synthase [Pusillimonas sp. T7-7]
 gi|330429355|gb|AEC20689.1| thymidylate synthase [Pusillimonas sp. T7-7]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY D +RHV + G+++ DRTG GTRS FG+QMRFDLS GFPL+T+KK+H KS+  ELL
Sbjct: 1   MHQYEDFMRHVYEHGTEKTDRTGTGTRSVFGHQMRFDLSAGFPLITSKKLHTKSIFIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSNV +L   GVSIW+EWAD++G+LGP+YGVQWRSWP   G  IDQI+ ++Q +R
Sbjct: 61  WFLRGDSNVRWLQEQGVSIWNEWADQNGDLGPVYGVQWRSWPTPGGQHIDQIAQVLQQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I  MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QNPDSRRLIVSAWNVAEIPNMALPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+FI T GD HLY+NH EQ +LQLSR P   P++ I      + 
Sbjct: 181 YALLTHMVAQQCDLEVGDFIWTGGDCHLYSNHMEQVELQLSRKPYPYPKLQIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF +  YE H  I A V+V
Sbjct: 241 DYRYEDFEIVGYESHPHIKAPVAV 264


>gi|56964719|ref|YP_176450.1| thymidylate synthase [Bacillus clausii KSM-K16]
 gi|62901226|sp|Q5WDS1|TYSY_BACSK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|56910962|dbj|BAD65489.1| thymidylate synthase [Bacillus clausii KSM-K16]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L  HV++ GS + DRTG GT S FGYQMRFDL KGFP++TTKK+H +S++HELL
Sbjct: 1   MEQYLQLCEHVLQNGSPKSDRTGTGTISVFGYQMRFDLEKGFPIVTTKKLHMRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWRSW   +G  +DQI+ +V+ ++
Sbjct: 61  WFLKGDTNIRYLQENGVRIWNEWADENGDLGPVYGKQWRSWEGANGKTVDQITEVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNVA I++MAL PCHCLFQFYV++GKLSCQLYQRS D+FLG+PFNI+S
Sbjct: 121 TNPNSRRLIVNAWNVAEIEEMALAPCHCLFQFYVNDGKLSCQLYQRSADIFLGVPFNISS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GD HLYNNH EQ  LQL+R P+ LP M INP + DL 
Sbjct: 181 YALLTMMMAQVCGLKPGEFIHTFGDAHLYNNHIEQTKLQLTRKPKQLPTMHINPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F Y+DF L+ Y+P+  I A+VSV
Sbjct: 241 AFTYDDFELKHYDPYPHIKAEVSV 264


>gi|91794130|ref|YP_563781.1| thymidylate synthase [Shewanella denitrificans OS217]
 gi|123060707|sp|Q12KG8|TYSY_SHEDO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91716132|gb|ABE56058.1| thymidylate synthase [Shewanella denitrificans OS217]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L+ H++  G+ + DRTG GTRS FGYQMRFDL++GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLALMEHILAHGAVKTDRTGTGTRSVFGYQMRFDLNQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH H VSIWDEWAD  G LGP+YG QWRSWP   G  +DQIS I++ ++
Sbjct: 61  WFLQGDTNVAYLHEHNVSIWDEWADDKGNLGPVYGAQWRSWPTQSGKAVDQISQIIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  +DKMAL PCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TQPDSRRLIVSAWNVGELDKMALAPCHALFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A       G+F+ T GD HLY+NH EQ  LQLSR P  LPQM I      + 
Sbjct: 181 YALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTKLQLSREPHALPQMNILRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L +Y+PH  I A V++
Sbjct: 241 DYQFDDFELVNYQPHPHIKAPVAI 264


>gi|315608816|ref|ZP_07883792.1| thymidylate synthase [Prevotella buccae ATCC 33574]
 gi|315249510|gb|EFU29523.1| thymidylate synthase [Prevotella buccae ATCC 33574]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR ++  G+ + DRTG GT S FG+QMRF+L +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLRRILDEGTPKGDRTGTGTLSVFGHQMRFNLEEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LGP+YG QWRSWPDY G  IDQI +++  + 
Sbjct: 61  WFLKGDTNVRYLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLDQIM 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWN A +D MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 RTPDSRRMMVSAWNPAEVDDMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G+FIHT GD HLY NH  QA LQL+R+PR LP M +NP +  L 
Sbjct: 181 YALLTMMMAQVTRLRPGDFIHTTGDTHLYLNHLSQARLQLTRTPRPLPTMRLNPEVKSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDFTL +Y+P+  I A VSV
Sbjct: 241 DFRFEDFTLENYDPYDHIKATVSV 264


>gi|283779094|ref|YP_003369849.1| thymidylate synthase [Pirellula staleyi DSM 6068]
 gi|283437547|gb|ADB15989.1| thymidylate synthase [Pirellula staleyi DSM 6068]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y  L++ ++  G+ + DRTG GT S FG+QMRFDLS+GFP +TTKK+H +S++HELL
Sbjct: 1   MEAYHQLMQRILDHGARKTDRTGTGTLSVFGHQMRFDLSQGFPAVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RG++N +YL  + VSIWDEWAD +G LGP+YG QWRSWP  DG  IDQ++ ++  ++
Sbjct: 61  WFIRGETNTAYLKENKVSIWDEWADSEGNLGPVYGRQWRSWPTPDGRQIDQLAEVIARIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +++MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RDPDSRRLIVSAWNVGELEQMALPPCHLLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G   G+F+HTLGD HLY+NH EQA LQLSR PR LP M INP + ++ 
Sbjct: 181 YALLTMMVAQVTGLALGDFVHTLGDAHLYSNHLEQAQLQLSREPRPLPTMQINPAVTEID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++DF L  Y+PH  I A V+V
Sbjct: 241 AFTFDDFKLVGYDPHPHIAAPVAV 264


>gi|306843264|ref|ZP_07475873.1| thymidylate synthase [Brucella sp. BO2]
 gi|306286530|gb|EFM58113.1| thymidylate synthase [Brucella sp. BO2]
          Length = 264

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 220/264 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ LR
Sbjct: 61  WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ANPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRMPKKLPVMHINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264


>gi|300704706|ref|YP_003746309.1| thymidylate synthetase [Ralstonia solanacearum CFBP2957]
 gi|299072370|emb|CBJ43708.1| thymidylate synthetase [Ralstonia solanacearum CFBP2957]
          Length = 264

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 1   MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQRGFPLVTTKKVHIKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 61  WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+ T GD HLYNNHFEQ + QL+R+P  LP++ I      + 
Sbjct: 181 YALLTHMIAQQTGLDVGDFVWTGGDCHLYNNHFEQVETQLARAPLPLPKLHIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+ HAAI A V+V
Sbjct: 241 DYQFEDFEIVGYQSHAAIKAPVAV 264


>gi|308173974|ref|YP_003920679.1| thymidylate synthase B [Bacillus amyloliquefaciens DSM 7]
 gi|307606838|emb|CBI43209.1| thymidylate synthase B [Bacillus amyloliquefaciens DSM 7]
 gi|328553100|gb|AEB23592.1| thymidylate synthase [Bacillus amyloliquefaciens TA208]
 gi|328912128|gb|AEB63724.1| thymidylate synthase B [Bacillus amyloliquefaciens LL3]
          Length = 264

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS ++  ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R  R LP++    N+  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF +  Y+PH  I   VSV
Sbjct: 241 DFAFEDFIIEDYDPHPHIKGAVSV 264


>gi|282858545|ref|ZP_06267716.1| thymidylate synthase [Prevotella bivia JCVIHMP010]
 gi|282588670|gb|EFB93804.1| thymidylate synthase [Prevotella bivia JCVIHMP010]
          Length = 264

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR +   G  + DRTG GT S FG+QMRF+++ GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLRRITTEGVKKEDRTGTGTLSVFGHQMRFNMADGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  HGV IW+EWAD++G+LGPIYG QWRSWPDY G  IDQI ++++ ++
Sbjct: 61  WFLNGDTNVKYLQEHGVRIWNEWADENGDLGPIYGHQWRSWPDYKGGAIDQIKNVLEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWN A ++ MALPPCHCLFQFYV +GKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 NTPDSRRMLVSAWNPAEVENMALPPCHCLFQFYVASGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD HLY NH EQ +LQL+R+PR LP+M INP++ DL 
Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTTGDTHLYLNHLEQVELQLTRTPRPLPKMNINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF YEDF L  Y P+  I   V+V
Sbjct: 241 SFNYEDFQLEDYAPYPHISGIVAV 264


>gi|300774218|ref|ZP_07084085.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300758897|gb|EFK55726.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 273

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 165/273 (60%), Positives = 206/273 (75%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV   G  + DRTG GT+S FGYQMRF+L +GFPL+TTKK+H +S++HEL+
Sbjct: 1   MKQYLDLLKHVYTNGVTKTDRTGTGTKSVFGYQMRFNLKEGFPLVTTKKLHLRSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD+ G LGP+YG QWRSWP   G  IDQI+ +++ L+
Sbjct: 61  WFLKGETNIQYLKENGVSIWDEWADEQGNLGPVYGSQWRSWPTPAGEHIDQIAQVIKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLYQRSGDVF 171
             P SRR IVSAWNVA I+ MALPPCH  FQFYV            +LSCQLYQRS D+F
Sbjct: 121 NTPDSRRIIVSAWNVAEIEHMALPPCHAFFQFYVAPAQPEAGILKPQLSCQLYQRSADIF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V   +  EFIHTLGD H+Y+NHFEQ +LQLSR P+ LP+MI
Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEPAEFIHTLGDAHIYSNHFEQTELQLSRDPKPLPKMI 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           INP++ D+  F++ DF L  YE H  I A V+V
Sbjct: 241 INPDVRDIFDFKFGDFELVDYESHPHIKAPVAV 273


>gi|310642333|ref|YP_003947091.1| thymidylate synthase 2 [Paenibacillus polymyxa SC2]
 gi|309247283|gb|ADO56850.1| Thymidylate synthase 2 [Paenibacillus polymyxa SC2]
          Length = 264

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL  +++ G  + DRTG GT S FG Q+RFDL+KGFPL+TTK+VH KSV+HELL
Sbjct: 1   MRNYLELLEDILENGVKKEDRTGTGTLSVFGRQLRFDLAKGFPLVTTKRVHLKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  +GVSIWDEWAD+ G LGP+YG QWR+W   DG  IDQI++++++++
Sbjct: 61  WFLRGDTNIAYLKENGVSIWDEWADEQGNLGPVYGSQWRAWETPDGQHIDQIANVIEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA I+ M LPPCH +FQFYV  GKLSC L  RS D FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVAEIESMKLPPCHFVFQFYVAGGKLSCMLTMRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + GEFI + GDVH+Y+NH +Q   QL R P  LPQ+ I      + 
Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHIQQVHTQLERDPYPLPQLKILRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +YE H  I A V++
Sbjct: 241 DYTYEDFVFENYEHHPGIKAPVAI 264


>gi|225024585|ref|ZP_03713777.1| hypothetical protein EIKCOROL_01462 [Eikenella corrodens ATCC
           23834]
 gi|224942647|gb|EEG23856.1| hypothetical protein EIKCOROL_01462 [Eikenella corrodens ATCC
           23834]
          Length = 257

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 169/257 (65%), Positives = 214/257 (83%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           ++H++  G+D+ DRTG GTRS FG+QMRFDL++GFPLLTTKK+H +S++HELLWFL+GD+
Sbjct: 1   MQHILSHGTDKSDRTGTGTRSVFGHQMRFDLAQGFPLLTTKKLHLRSIIHELLWFLKGDT 60

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++ +P SRR
Sbjct: 61  NIRYLKENNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIKRNPDSRR 120

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            IVSAWN AL+D+MALPPCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIASY+LLTMM
Sbjct: 121 LIVSAWNPALVDEMALPPCHALFQFYVAEGRLSCQLYQRSADVFLGVPFNIASYALLTMM 180

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A V G   GEFIHT GD HLY+NHFEQA LQL+R PR LPQM +NP + +L  FR+EDF
Sbjct: 181 MAQVCGLAPGEFIHTFGDAHLYSNHFEQARLQLTREPRALPQMQLNPEVQNLFDFRFEDF 240

Query: 248 TLRSYEPHAAILAKVSV 264
            L++Y+PH  I A+V+V
Sbjct: 241 ELQNYDPHPHIKAQVAV 257


>gi|205373119|ref|ZP_03225923.1| thymidylate synthase [Bacillus coahuilensis m4-4]
          Length = 264

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L   ++K G  + DRTG GT STFGYQMR++L  GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLHLCEEILKNGVKKEDRTGTGTISTFGYQMRYNLQDGFPLVTTKKLHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD++GELGP+YG QWRSW   +G  IDQIS ++  ++
Sbjct: 61  WFLKGDTNIKYLQDNGVRIWNEWADENGELGPVYGHQWRSWTGSNGETIDQISQLIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ++ MALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QNPNSRRLIVSAWNVADVNHMALPPCHCLFQFYVAEGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V   + G+FIHTLGD H+Y+NH EQ +LQL+R  + LP+M +NP I D+ 
Sbjct: 181 YALLTLMIAQVCDLEPGDFIHTLGDAHIYSNHVEQVELQLTREVKDLPKMKLNPEIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF+L  Y+PH  I   VSV
Sbjct: 241 NFTFEDFSLEGYDPHPHIKGIVSV 264


>gi|86358403|ref|YP_470295.1| thymidylate synthase [Rhizobium etli CFN 42]
 gi|123724761|sp|Q2K6G8|TYSY_RHIEC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|86282505|gb|ABC91568.1| thymidylate synthase protein [Rhizobium etli CFN 42]
          Length = 264

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S+VHELL
Sbjct: 1   MQQYLDLLAHVMEKGSDRGDRTGTGTRSVFGYQMRFDLGEGFPVLTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPNSRRHIVSAWNPAEVDQMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLKGGDFVHTLGDAHLYHNHFDQAKLQLTRRPKPLPFMRINPEVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L  YE  A+I A ++V
Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264


>gi|86749158|ref|YP_485654.1| thymidylate synthase [Rhodopseudomonas palustris HaA2]
 gi|123408309|sp|Q2IYG7|TYSY_RHOP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|86572186|gb|ABD06743.1| thymidylate synthase [Rhodopseudomonas palustris HaA2]
          Length = 264

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G+++ DRTG GT S FG+Q+RFDL+ GFP+LTTK++  K+++HELL
Sbjct: 1   MIPYHDLLERILSDGAEKHDRTGTGTLSVFGHQLRFDLAAGFPMLTTKRLPLKAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+ +V  +R
Sbjct: 61  WFLQGDTNIKYLHDHGVTIWDEWADANGDLGPVYGAQWRSWPTADGRSIDQIAHVVDMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A ++KMALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY+NH EQA LQL+R+PR LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVTGLKPGDFIHTLGDAHLYSNHLEQARLQLTRAPRALPAMAINPAVTDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDFTL  Y+PH  I A+V+V
Sbjct: 241 GFRYEDFTLHGYDPHPHIKAEVAV 264


>gi|7766862|pdb|1EVG|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia
           Coli With Unmodified Catalytic Cysteine
          Length = 264

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 200/263 (76%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRTCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|149926867|ref|ZP_01915126.1| thymidylate synthase [Limnobacter sp. MED105]
 gi|149824419|gb|EDM83637.1| thymidylate synthase [Limnobacter sp. MED105]
          Length = 264

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV+  G+D+ DRTG GTRS FGYQMRF+L  GFP++TTKK+H +S++HELL
Sbjct: 1   MQQYLDLMQHVLDHGTDKMDRTGTGTRSVFGYQMRFNLQDGFPMVTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GDSN+ YL  +GVSIWDEWAD++G LGP+YGVQWRSWP  DG  IDQIS ++Q ++
Sbjct: 61  WFLMGDSNIRYLKENGVSIWDEWADENGNLGPVYGVQWRSWPTADGRHIDQISQLMQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA I+ M LPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVADINNMKLPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       G+F+ T GD HLY+NH EQ   QLSR P  LP + I      + 
Sbjct: 181 YALLTHMVAQQCDLDVGDFVWTGGDCHLYSNHMEQVAEQLSRKPHPLPTLQIKRKPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF + +Y  H  I A V+V
Sbjct: 241 DYKFEDFEILNYTCHPHIKAPVAV 264


>gi|294635084|ref|ZP_06713597.1| thymidylate synthase [Edwardsiella tarda ATCC 23685]
 gi|291091524|gb|EFE24085.1| thymidylate synthase [Edwardsiella tarda ATCC 23685]
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLDLMRKVLDEGTPKADRTGTGTLSIFGHQMRFNLQQGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV+YLH + V+IWDEWAD+ G+LGP+YG QWR+W   DG  +DQIS ++  LR
Sbjct: 61  WFLKGETNVNYLHDNNVTIWDEWADEQGDLGPVYGKQWRAWGCADGRQVDQISQVMAQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGRLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A  +    G+F+ T GD HLY+NH EQ  LQLSR PR LP++++      + 
Sbjct: 181 YALLVHMMAQQLDLAVGDFVWTGGDTHLYSNHMEQTALQLSREPRPLPRLVLARRPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH AI A V++
Sbjct: 241 DYRFEDFIIEGYDPHPAIKAPVAI 264


>gi|82411148|gb|ABB75257.1| thymidylate synthase [Nitrosospira multiformis ATCC 25196]
          Length = 285

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G  + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H KS+++ELL
Sbjct: 22  MRQYLDLMQHVLEHGQKKSDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKLHLKSIIYELL 81

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ + VSIWDEWAD++G+LGPIYG QWRSWP+  G  IDQI  +V+ +R
Sbjct: 82  WFLKGDTNIRYLNENDVSIWDEWADENGDLGPIYGRQWRSWPNGKGGHIDQIEQVVEQIR 141

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VS+WNV  + +M L PCH LFQFYV   KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 142 NTPDSRRMLVSSWNVGELQEMKLAPCHALFQFYVAEDKLSCQLYQRSADIFLGVPFNIAS 201

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+MLA     + GEF+HT GD HLY NH EQA  QL R P+ LP M +NP I ++ 
Sbjct: 202 YALLTLMLAQSCDLRAGEFVHTFGDAHLYLNHLEQAREQLERGPKKLPIMKLNPAIRNVF 261

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH +I A ++V
Sbjct: 262 DFRYEDFNLEGYDPHPSIKAPIAV 285


>gi|17986891|ref|NP_539525.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|23502270|ref|NP_698397.1| thymidylate synthase [Brucella suis 1330]
 gi|62290293|ref|YP_222086.1| thymidylate synthase [Brucella abortus bv. 1 str. 9-941]
 gi|82700216|ref|YP_414790.1| thymidylate synthase [Brucella melitensis biovar Abortus 2308]
 gi|163843654|ref|YP_001628058.1| thymidylate synthase [Brucella suis ATCC 23445]
 gi|189024526|ref|YP_001935294.1| thymidylate synthase [Brucella abortus S19]
 gi|225627851|ref|ZP_03785888.1| thymidylate synthase [Brucella ceti str. Cudo]
 gi|225852881|ref|YP_002733114.1| thymidylate synthase [Brucella melitensis ATCC 23457]
 gi|237815800|ref|ZP_04594797.1| thymidylate synthase [Brucella abortus str. 2308 A]
 gi|254689595|ref|ZP_05152849.1| thymidylate synthase [Brucella abortus bv. 6 str. 870]
 gi|254694085|ref|ZP_05155913.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya]
 gi|254697737|ref|ZP_05159565.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254702121|ref|ZP_05163949.1| thymidylate synthase [Brucella suis bv. 5 str. 513]
 gi|254704658|ref|ZP_05166486.1| thymidylate synthase [Brucella suis bv. 3 str. 686]
 gi|254708073|ref|ZP_05169901.1| thymidylate synthase [Brucella pinnipedialis M163/99/10]
 gi|254710443|ref|ZP_05172254.1| thymidylate synthase [Brucella pinnipedialis B2/94]
 gi|254714436|ref|ZP_05176247.1| thymidylate synthase [Brucella ceti M644/93/1]
 gi|254717333|ref|ZP_05179144.1| thymidylate synthase [Brucella ceti M13/05/1]
 gi|254730626|ref|ZP_05189204.1| thymidylate synthase [Brucella abortus bv. 4 str. 292]
 gi|256031937|ref|ZP_05445551.1| thymidylate synthase [Brucella pinnipedialis M292/94/1]
 gi|256045031|ref|ZP_05447932.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061458|ref|ZP_05451602.1| thymidylate synthase [Brucella neotomae 5K33]
 gi|256113948|ref|ZP_05454736.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether]
 gi|256160135|ref|ZP_05457829.1| thymidylate synthase [Brucella ceti M490/95/1]
 gi|256255341|ref|ZP_05460877.1| thymidylate synthase [Brucella ceti B1/94]
 gi|256257844|ref|ZP_05463380.1| thymidylate synthase [Brucella abortus bv. 9 str. C68]
 gi|256263636|ref|ZP_05466168.1| thymidylate synthase [Brucella melitensis bv. 2 str. 63/9]
 gi|256369815|ref|YP_003107326.1| thymidylate synthase [Brucella microti CCM 4915]
 gi|260169073|ref|ZP_05755884.1| thymidylate synthase [Brucella sp. F5/99]
 gi|260546835|ref|ZP_05822574.1| thymidylate synthase [Brucella abortus NCTC 8038]
 gi|260565371|ref|ZP_05835855.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|260566096|ref|ZP_05836566.1| thymidylate synthase [Brucella suis bv. 4 str. 40]
 gi|260755122|ref|ZP_05867470.1| thymidylate synthase [Brucella abortus bv. 6 str. 870]
 gi|260758341|ref|ZP_05870689.1| thymidylate synthase [Brucella abortus bv. 4 str. 292]
 gi|260762167|ref|ZP_05874510.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884134|ref|ZP_05895748.1| thymidylate synthase [Brucella abortus bv. 9 str. C68]
 gi|261214383|ref|ZP_05928664.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya]
 gi|261219162|ref|ZP_05933443.1| thymidylate synthase [Brucella ceti M13/05/1]
 gi|261222542|ref|ZP_05936823.1| thymidylate synthase [Brucella ceti B1/94]
 gi|261315574|ref|ZP_05954771.1| thymidylate synthase [Brucella pinnipedialis M163/99/10]
 gi|261318013|ref|ZP_05957210.1| thymidylate synthase [Brucella pinnipedialis B2/94]
 gi|261322224|ref|ZP_05961421.1| thymidylate synthase [Brucella ceti M644/93/1]
 gi|261325464|ref|ZP_05964661.1| thymidylate synthase [Brucella neotomae 5K33]
 gi|261752691|ref|ZP_05996400.1| thymidylate synthase [Brucella suis bv. 5 str. 513]
 gi|261755351|ref|ZP_05999060.1| thymidylate synthase [Brucella suis bv. 3 str. 686]
 gi|261758577|ref|ZP_06002286.1| thymidylate synthase [Brucella sp. F5/99]
 gi|265989043|ref|ZP_06101600.1| thymidylate synthase [Brucella pinnipedialis M292/94/1]
 gi|265991458|ref|ZP_06104015.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995295|ref|ZP_06107852.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether]
 gi|265998507|ref|ZP_06111064.1| thymidylate synthase [Brucella ceti M490/95/1]
 gi|294852725|ref|ZP_06793398.1| thymidylate synthase [Brucella sp. NVSL 07-0026]
 gi|297248681|ref|ZP_06932399.1| thymidylate synthase [Brucella abortus bv. 5 str. B3196]
 gi|54039795|sp|P67043|TYSY_BRUSU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54042281|sp|P67042|TYSY_BRUME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|75505250|sp|Q57CA9|TYSY_BRUAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123727399|sp|Q2YS22|TYSY_BRUA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036929|sp|B0CHI7|TYSY_BRUSI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790231|sp|C0RE38|TYSY_BRUMB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|17982532|gb|AAL51789.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|23348244|gb|AAN30312.1| thymidylate synthase [Brucella suis 1330]
 gi|62196425|gb|AAX74725.1| ThyA, thymidylate synthase [Brucella abortus bv. 1 str. 9-941]
 gi|82616317|emb|CAJ11374.1| Thymidylate synthase [Brucella melitensis biovar Abortus 2308]
 gi|163674377|gb|ABY38488.1| Thymidylate synthase [Brucella suis ATCC 23445]
 gi|189020098|gb|ACD72820.1| Thymidylate synthase [Brucella abortus S19]
 gi|225617856|gb|EEH14901.1| thymidylate synthase [Brucella ceti str. Cudo]
 gi|225641246|gb|ACO01160.1| thymidylate synthase [Brucella melitensis ATCC 23457]
 gi|237789098|gb|EEP63309.1| thymidylate synthase [Brucella abortus str. 2308 A]
 gi|255999978|gb|ACU48377.1| thymidylate synthase [Brucella microti CCM 4915]
 gi|260095885|gb|EEW79762.1| thymidylate synthase [Brucella abortus NCTC 8038]
 gi|260151439|gb|EEW86533.1| thymidylate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|260155614|gb|EEW90694.1| thymidylate synthase [Brucella suis bv. 4 str. 40]
 gi|260668659|gb|EEX55599.1| thymidylate synthase [Brucella abortus bv. 4 str. 292]
 gi|260672599|gb|EEX59420.1| thymidylate synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675230|gb|EEX62051.1| thymidylate synthase [Brucella abortus bv. 6 str. 870]
 gi|260873662|gb|EEX80731.1| thymidylate synthase [Brucella abortus bv. 9 str. C68]
 gi|260915990|gb|EEX82851.1| thymidylate synthase [Brucella abortus bv. 3 str. Tulya]
 gi|260921126|gb|EEX87779.1| thymidylate synthase [Brucella ceti B1/94]
 gi|260924251|gb|EEX90819.1| thymidylate synthase [Brucella ceti M13/05/1]
 gi|261294914|gb|EEX98410.1| thymidylate synthase [Brucella ceti M644/93/1]
 gi|261297236|gb|EEY00733.1| thymidylate synthase [Brucella pinnipedialis B2/94]
 gi|261301444|gb|EEY04941.1| thymidylate synthase [Brucella neotomae 5K33]
 gi|261304600|gb|EEY08097.1| thymidylate synthase [Brucella pinnipedialis M163/99/10]
 gi|261738561|gb|EEY26557.1| thymidylate synthase [Brucella sp. F5/99]
 gi|261742444|gb|EEY30370.1| thymidylate synthase [Brucella suis bv. 5 str. 513]
 gi|261745104|gb|EEY33030.1| thymidylate synthase [Brucella suis bv. 3 str. 686]
 gi|262553131|gb|EEZ08965.1| thymidylate synthase [Brucella ceti M490/95/1]
 gi|262766408|gb|EEZ12197.1| thymidylate synthase [Brucella melitensis bv. 3 str. Ether]
 gi|263002242|gb|EEZ14817.1| thymidylate synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093689|gb|EEZ17694.1| thymidylate synthase [Brucella melitensis bv. 2 str. 63/9]
 gi|264661240|gb|EEZ31501.1| thymidylate synthase [Brucella pinnipedialis M292/94/1]
 gi|294821314|gb|EFG38313.1| thymidylate synthase [Brucella sp. NVSL 07-0026]
 gi|297175850|gb|EFH35197.1| thymidylate synthase [Brucella abortus bv. 5 str. B3196]
 gi|326409422|gb|ADZ66487.1| Thymidylate synthase [Brucella melitensis M28]
 gi|326539129|gb|ADZ87344.1| thymidylate synthase [Brucella melitensis M5-90]
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 61  WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264


>gi|224025685|ref|ZP_03644051.1| hypothetical protein BACCOPRO_02425 [Bacteroides coprophilus DSM
           18228]
 gi|224018921|gb|EEF76919.1| hypothetical protein BACCOPRO_02425 [Bacteroides coprophilus DSM
           18228]
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +   G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLHRIRTEGVRKDDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY+G  IDQIS  V+++R
Sbjct: 61  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYEGGFIDQISEAVETIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNVA +  M LPPCH  FQFYV +G+LS Q+YQRS D FLG+PFNIAS
Sbjct: 121 KNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVADGQLSLQMYQRSADSFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ DLQLSR PR LP+MI+NP++ ++ 
Sbjct: 181 YALLLQMMAQVTGLKPGDFIHTLGDAHIYLNHLEQVDLQLSREPRPLPRMILNPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y+P   I  KVSV
Sbjct: 241 DFKYEDFQLEGYDPWPHIAGKVSV 264


>gi|209550125|ref|YP_002282042.1| thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535881|gb|ACI55816.1| Thymidylate synthase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 175/264 (66%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+ TTKK+H +S++HELL
Sbjct: 1   MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLQEGFPVTTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGETNIGYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLGIPFNIAS
Sbjct: 121 NNPNSRRHIVSAWNPAEVDQMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M INP++ D+ 
Sbjct: 181 YALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF ++DF L  YE  A+I A ++V
Sbjct: 241 SFTFDDFELIGYEADASIKAPIAV 264


>gi|34541643|ref|NP_906122.1| thymidylate synthase [Porphyromonas gingivalis W83]
 gi|188995925|ref|YP_001930177.1| thymidylate synthase [Porphyromonas gingivalis ATCC 33277]
 gi|34397961|gb|AAQ67021.1| thymidylate synthase [Porphyromonas gingivalis W83]
 gi|188595605|dbj|BAG34580.1| thymidylate synthase [Porphyromonas gingivalis ATCC 33277]
          Length = 267

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR ++  G  + DRTG GT S FG+QM FDL +GFPLLTTK++H KS+++ELL
Sbjct: 4   MKQYLDLLRRILDEGVRKEDRTGTGTISVFGHQMCFDLEEGFPLLTTKRLHLKSIIYELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL  HGV IW+EWAD++G+LGPIYG QWRSWPDY G  IDQ+  +++ LR
Sbjct: 64  WFLRGDTNVHYLQEHGVRIWNEWADENGDLGPIYGYQWRSWPDYRGGHIDQMQEVLRQLR 123

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV +WNV  +  M LPPCHC  QFYV +G+LS QLYQRS D FLGIPFNIAS
Sbjct: 124 EEPDSRRIIVCSWNVGQLADMHLPPCHCFMQFYVADGRLSLQLYQRSADSFLGIPFNIAS 183

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G F+HTLGD H+Y NH EQ  LQLSR PR LP+M++NP + DL 
Sbjct: 184 YALLLQMIAHVTGLKPGRFVHTLGDAHIYLNHLEQVQLQLSREPRALPRMVLNPEVSDLF 243

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH  I   V+V
Sbjct: 244 DFRYEDFRLEGYDPHPHIAGVVAV 267


>gi|46202071|ref|ZP_00053813.2| COG0207: Thymidylate synthase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR +   G  + DRTG GT S FG+QMRFDLS GFPL+TTKK+H +S+  ELL
Sbjct: 1   MQQYLDLLRRIRAEGVTKTDRTGTGTTSVFGHQMRFDLSAGFPLVTTKKLHTRSIFVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  + VSIWDEWAD DG+LGP+YG QWRSW   DG  +DQI+ +V+ ++
Sbjct: 61  WFLRGDTNIRYLKDNKVSIWDEWADADGDLGPVYGKQWRSWACPDGRTVDQITQVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A I+ MALPPCHCLFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVAEGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G+F+HT GD HLY+NH EQA+LQLSR+P  LP++ +NP++ DL 
Sbjct: 181 YALLTHMMAQVTGLEVGDFVHTFGDAHLYSNHMEQAELQLSRAPLALPRLELNPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D  +  Y+ HA I A V+V
Sbjct: 241 AFTMDDIKVVDYQCHAHISAPVAV 264


>gi|62901348|sp|Q7MTB5|TYSY_PORGI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR ++  G  + DRTG GT S FG+QM FDL +GFPLLTTK++H KS+++ELL
Sbjct: 1   MKQYLDLLRRILDEGVRKEDRTGTGTISVFGHQMCFDLEEGFPLLTTKRLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL  HGV IW+EWAD++G+LGPIYG QWRSWPDY G  IDQ+  +++ LR
Sbjct: 61  WFLRGDTNVHYLQEHGVRIWNEWADENGDLGPIYGYQWRSWPDYRGGHIDQMQEVLRQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV +WNV  +  M LPPCHC  QFYV +G+LS QLYQRS D FLGIPFNIAS
Sbjct: 121 EEPDSRRIIVCSWNVGQLADMHLPPCHCFMQFYVADGRLSLQLYQRSADSFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G F+HTLGD H+Y NH EQ  LQLSR PR LP+M++NP + DL 
Sbjct: 181 YALLLQMIAHVTGLKPGRFVHTLGDAHIYLNHLEQVQLQLSREPRALPRMVLNPEVSDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH  I   V+V
Sbjct: 241 DFRYEDFRLEGYDPHPHIAGVVAV 264


>gi|13471483|ref|NP_103049.1| thymidylate synthase [Mesorhizobium loti MAFF303099]
 gi|22096229|sp|Q98KH9|TYSY_RHILO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|14022225|dbj|BAB48835.1| thymidylate synthase [Mesorhizobium loti MAFF303099]
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV+  G+DR DRTG GTRS FGYQMRFDL++GFP+ TTKK+H KS++HELL
Sbjct: 1   MRQYLDLLQHVLDNGADRSDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  HGV+IWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+ +++ +R
Sbjct: 61  WFLAGDTNIKYLTDHGVTIWDEWADENGDLGPVYGRQWRSWPDGHGGSIDQIAGLLKEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++ MALPPCHCLFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+HTLGD HLY+NHFEQA  QL R+PR LP M INP + DL 
Sbjct: 181 YALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLQRTPRALPTMWINPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L +Y   A+I A ++V
Sbjct: 241 AFRFEDFRLENYVADASIQAPIAV 264


>gi|9257014|pdb|1F4D|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase C146s,
           L143c Covalently Modified At C143 With N-[tosyl-D-
           Prolinyl]amino-Ethanethiol
 gi|9257015|pdb|1F4D|B Chain B, Crystal Structure Of E. Coli Thymidylate Synthase C146s,
           L143c Covalently Modified At C143 With N-[tosyl-D-
           Prolinyl]amino-Ethanethiol
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 150/263 (57%), Positives = 198/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMA  P H  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMACAPSHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|238796578|ref|ZP_04640085.1| Thymidylate synthase [Yersinia mollaretii ATCC 43969]
 gi|238719556|gb|EEQ11365.1| Thymidylate synthase [Yersinia mollaretii ATCC 43969]
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S++V+ L+
Sbjct: 61  WFLNGDTNIGYLKENSVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     + G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLIHMMAQQCDLEVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH  I A +++
Sbjct: 241 DYHFDDFEIEGYDPHPGIKAPIAI 264


>gi|116252999|ref|YP_768837.1| thymidylate synthase [Rhizobium leguminosarum bv. viciae 3841]
 gi|122988452|sp|Q1ME82|TYSY_RHIL3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|115257647|emb|CAK08744.1| putative thymidylate synthase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 172/264 (65%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D+MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNI+S
Sbjct: 121 NNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNISS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V+G + G+F+HTLGD HLY+NHF+QA LQL+R P+ LP M I P++ D+ 
Sbjct: 181 YALLTMMVAQVVGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L  YE  A+I A ++V
Sbjct: 241 GFTFDDFELIGYEADASIKAPIAV 264


>gi|190892527|ref|YP_001979069.1| thymidylate synthase [Rhizobium etli CIAT 652]
 gi|190697806|gb|ACE91891.1| thymidylate synthase protein [Rhizobium etli CIAT 652]
          Length = 264

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MQQYLDLLKHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  HGVSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ + 
Sbjct: 61  WFLKGETNIGYLRDHGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIV 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWN A +D MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPNSRRHIVSAWNPAEVDNMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HT GD HLY+NHF+QA LQL+R P+ LP M INP++ D+ 
Sbjct: 181 YALLTMMVAQVTGLKSGDFVHTFGDAHLYHNHFDQAKLQLTRRPKPLPFMRINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF +EDF L  YE  A I A ++V
Sbjct: 241 SFTFEDFELIGYEADANIKAPIAV 264


>gi|189462550|ref|ZP_03011335.1| hypothetical protein BACCOP_03240 [Bacteroides coprocola DSM 17136]
 gi|189430711|gb|EDU99695.1| hypothetical protein BACCOP_03240 [Bacteroides coprocola DSM 17136]
          Length = 274

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +   G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 11  MKQYLDLLQRIRTEGVKKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWPDY+G  IDQIS  V++++
Sbjct: 71  WFLKGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPDYEGGFIDQISEAVETIK 130

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNVA +  M LPPCH  FQFYV NG+LS Q+YQRS D FLG+PFNIAS
Sbjct: 131 HNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVANGRLSLQMYQRSADSFLGVPFNIAS 190

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHT+GD H+Y NH EQ DLQL+RSPR LPQM++NP++ ++ 
Sbjct: 191 YALLLQMMAQVTGLKAGDFIHTIGDAHIYLNHQEQVDLQLTRSPRPLPQMLLNPDVKNIF 250

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y+P   I  KVSV
Sbjct: 251 DFKYEDFELVNYDPWPHIAGKVSV 274


>gi|220935909|ref|YP_002514808.1| Thymidylate synthase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254790255|sp|B8GN06|TYSY_THISH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219997219|gb|ACL73821.1| Thymidylate synthase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 277

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 167/277 (60%), Positives = 207/277 (74%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+R +++ G+ + DRTG GTRS FG+QMRFDLSKGFPL+TTKK+H KS++HELL
Sbjct: 1   MQPYLDLMRQLLEHGTVKSDRTGTGTRSLFGHQMRFDLSKGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  +GV IWDEWA +DGELGP+YG QWR+WP  DG  IDQIS +V+ +R
Sbjct: 61  WFLKGETNIAYLKDNGVRIWDEWATEDGELGPVYGRQWRAWPTPDGRHIDQISQVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWNVA +               MAL PCH  FQFYV +G+LSCQLYQRS
Sbjct: 121 TRPDSRRLIVSAWNVAELPDEGISPKDNARAGRMALAPCHTFFQFYVADGRLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLT+M+A V   + G+F+HT GDVHLY+NH EQA  QLSR P  L
Sbjct: 181 ADVFLGVPFNIASYALLTLMVAQVTDLEPGDFVHTFGDVHLYSNHVEQAKEQLSREPYPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP +  L  FRYEDFTL  Y+ H  I A V++
Sbjct: 241 PKMHLNPEVKSLFDFRYEDFTLEGYQAHPHIKAPVAI 277


>gi|312113785|ref|YP_004011381.1| thymidylate synthase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218914|gb|ADP70282.1| thymidylate synthase [Rhodomicrobium vannielii ATCC 17100]
          Length = 264

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 168/264 (63%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR V   G+ R DRTG GT S FG Q+RFDL  GFPL+TTKK+H KS+VHELL
Sbjct: 1   MQTYLDLLRDVRDHGTRRDDRTGTGTLSLFGRQLRFDLEAGFPLVTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N +YL  +GVSIWDEWAD +G+LGP+YG QWRSWP+ D   IDQI+ +++++R
Sbjct: 61  WFLAGDTNTAYLKANGVSIWDEWADANGDLGPVYGAQWRSWPERDCGTIDQIAEVIRAIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR +VSAWN A + +MAL PCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TDPNSRRLVVSAWNPADLPRMALAPCHCLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM A V G + G+F+HT GDVHLY NH EQAD QL R PR LP+M +NP +  + 
Sbjct: 181 YALLTMMAAQVTGLRPGDFVHTFGDVHLYLNHREQADEQLGREPRPLPRMTLNPAVTSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y DF L  Y PH AI A V+V
Sbjct: 241 DFAYADFKLEGYAPHPAIKAPVAV 264


>gi|313203340|ref|YP_004041997.1| thymidylate synthase [Paludibacter propionicigenes WB4]
 gi|312442656|gb|ADQ79012.1| thymidylate synthase [Paludibacter propionicigenes WB4]
          Length = 264

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+DLL  V+  G  + DRTG GT S FG+QMRF++  GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYIDLLNRVLTEGVHKEDRTGTGTISVFGHQMRFNMEDGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IW+EWAD+ G LG IYG QWRSWPDY+G  IDQI+ +V +++
Sbjct: 61  WFLNGDTNIKYLTDNGVRIWNEWADEQGNLGHIYGYQWRSWPDYNGGHIDQITEVVNAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I  M LPPCH  FQFYV NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRIIVSAWNVADIPNMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+F+HTLGD H+Y NH EQ  LQLSR PR LP M INP+I D+ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFVHTLGDAHIYTNHMEQVKLQLSREPRPLPTMKINPDIKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF + DF L  Y+PH  I   V+V
Sbjct: 241 SFSFSDFELIDYDPHPHIKGVVAV 264


>gi|254719433|ref|ZP_05181244.1| thymidylate synthase [Brucella sp. 83/13]
 gi|265984437|ref|ZP_06097172.1| thymidylate synthase [Brucella sp. 83/13]
 gi|306839209|ref|ZP_07472026.1| thymidylate synthase [Brucella sp. NF 2653]
 gi|306844297|ref|ZP_07476889.1| thymidylate synthase [Brucella sp. BO1]
 gi|264663029|gb|EEZ33290.1| thymidylate synthase [Brucella sp. 83/13]
 gi|306275369|gb|EFM57110.1| thymidylate synthase [Brucella sp. BO1]
 gi|306405756|gb|EFM62018.1| thymidylate synthase [Brucella sp. NF 2653]
          Length = 264

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 177/264 (67%), Positives = 220/264 (83%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 61  WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ANPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264


>gi|297583464|ref|YP_003699244.1| thymidylate synthase [Bacillus selenitireducens MLS10]
 gi|297141921|gb|ADH98678.1| thymidylate synthase [Bacillus selenitireducens MLS10]
          Length = 264

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L RHV++ G+ + DRTG GT STFGYQMRFDL  GFP+LTTKK+  ++++HELL
Sbjct: 1   MENYLNLCRHVLEHGTAKDDRTGTGTISTFGYQMRFDLQDGFPVLTTKKMALRAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++G++N+ YL  H V IWDEWAD++G+LGP+YG QWRSWP  DG  IDQ+  ++++++
Sbjct: 61  WFIKGETNIRYLKEHNVRIWDEWADENGDLGPVYGRQWRSWPTPDGRTIDQLREVIEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRH+++AWNV  +D+MAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPDSRRHVINAWNVGELDQMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLTMM+A   G + GEFIHT GDVH+Y NH EQ  LQL+R+P   P+M +NP+   + 
Sbjct: 181 YSLLTMMVAQECGLEPGEFIHTFGDVHIYQNHLEQVRLQLTRTPGQKPEMRLNPDKKRIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F  EDF L  Y+PH AI  +VSV
Sbjct: 241 DFTIEDFELIGYDPHPAIKGEVSV 264


>gi|253576709|ref|ZP_04854036.1| thymidylate synthase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843919|gb|EES71940.1| thymidylate synthase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 264

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 158/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YLDLL  V+K G+ + DRTGVGTRS FG Q+RFDLS+GFPL+TTK++H KSV+HELL
Sbjct: 1   MRKYLDLLEDVLKNGTPKEDRTGVGTRSVFGRQLRFDLSEGFPLVTTKRIHLKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  HGV IWDEWAD++G+LGP+YG QWRSW   DG  IDQI+++V++++
Sbjct: 61  WFLRGDTNIAYLKEHGVRIWDEWADENGDLGPVYGSQWRSWEAPDGRKIDQIANVVEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRH+VSAWNVA +D+M LPPCH +FQFYV NGKLSC L  RS D FLG+PFNIAS
Sbjct: 121 KNPDSRRHLVSAWNVAEVDQMKLPPCHFVFQFYVANGKLSCMLTMRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GEFI + GDVH+YNNH EQ   QL R P  LP+++I      + 
Sbjct: 181 YALLTHMIAQQCDLEVGEFIWSGGDVHIYNNHIEQVKTQLEREPYPLPKLVIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YEDF    Y+ H  I A V+V
Sbjct: 241 DYKYEDFEFIDYQYHPTIKATVAV 264


>gi|227538336|ref|ZP_03968385.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241851|gb|EEI91866.1| thymidylate synthase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 273

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 165/273 (60%), Positives = 206/273 (75%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+HV   G  + DRTG GT+S FGYQMRF+L +GFPL+TTKK+H +S++HEL+
Sbjct: 1   MKQYLDLLKHVYTNGVTKTDRTGTGTKSVFGYQMRFNLKEGFPLVTTKKLHLRSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GVSIWDEWAD+ G LGP+YG QWRSWP   G  IDQI+ +++ L+
Sbjct: 61  WFLKGETNIQYLKENGVSIWDEWADEQGNLGPVYGSQWRSWPTPAGEHIDQIAQVIKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLYQRSGDVF 171
             P SRR IVSAWNVA I+ MALPPCH  FQFYV            +LSCQLYQRS D+F
Sbjct: 121 NTPDSRRIIVSAWNVAEIEHMALPPCHAFFQFYVAPAQPEAGIMKPQLSCQLYQRSADIF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V   +  EFIHTLGD H+Y+NHFEQ +LQLSR P+ LP+MI
Sbjct: 181 LGVPFNIASYALLTMMVAQVCDMEAAEFIHTLGDAHIYSNHFEQTELQLSRDPKPLPKMI 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           INP++ D+  F++ DF L  YE H  I A V+V
Sbjct: 241 INPDVRDIFDFKFGDFELVDYESHPHIKAPVAV 273


>gi|6686339|sp|P54081|TYSY2_BACAM RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2;
           AltName: Full=Thymidylate synthase B; Short=TS B;
           Short=TSase B
          Length = 264

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L  GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQGGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS ++  ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R  R LP++    N+  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF +  Y+PH  I   VSV
Sbjct: 241 DFAFEDFIIEDYDPHPHIKGAVSV 264


>gi|297538294|ref|YP_003674063.1| thymidylate synthase [Methylotenera sp. 301]
 gi|297257641|gb|ADI29486.1| thymidylate synthase [Methylotenera sp. 301]
          Length = 264

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +LL HV+  G+ + DRTG GT S FGYQMRF+L +GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYTELLNHVLAHGNQKTDRTGTGTLSVFGYQMRFNLEEGFPLLTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N++YL  +GV IWDEWAD +G LGP+YG QWR+WP  DG  IDQI+ +V +++
Sbjct: 61  WFLQGSTNIAYLKENGVRIWDEWADDNGNLGPVYGYQWRNWPKPDGTHIDQITQVVNAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA +D+M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRLIVSAWNVADVDQMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD H+Y NH EQ   QLSR  R+LPQM INP + ++ 
Sbjct: 181 YALLTMMVAQVCGLKLGDFVHTLGDAHIYTNHMEQVHEQLSRDIRSLPQMHINPEVHNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +Y+PH AI   V+V
Sbjct: 241 DFKFEDFTLVNYDPHPAIKGLVAV 264


>gi|311068693|ref|YP_003973616.1| thymidylate synthase [Bacillus atrophaeus 1942]
 gi|310869210|gb|ADP32685.1| thymidylate synthase [Bacillus atrophaeus 1942]
          Length = 264

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 165/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLENGEIKGDRTGTGTISTFGYQMRFNLQEGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQI+ +V  ++
Sbjct: 61  WFLKGETNVKYLQDNGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQITRLVHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGEIDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ ++QL+R  R LP++     +  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHTEQVNMQLTRDVRPLPKLRFAREVDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF +  Y+PH  I   VSV
Sbjct: 241 DFTFDDFIVEDYDPHPHIKGAVSV 264


>gi|288801490|ref|ZP_06406942.1| thymidylate synthase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331571|gb|EFC70057.1| thymidylate synthase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 264

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 174/264 (65%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H+I  G+ + DRTG GT+S FGYQMRF+L  GFPLLTTKK+H KS++HELL
Sbjct: 1   MKAYLDLLQHIINNGATKGDRTGTGTKSVFGYQMRFNLEDGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSWP+Y G  IDQI+ +V  ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGHQWRSWPNYKGGTIDQITQVVDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN A +D+MALPPCHCLFQFYV N KLS QLYQRS D FLG+PFNIAS
Sbjct: 121 NNPNSRRMIVTAWNPAEVDEMALPPCHCLFQFYVANNKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLL MM+A V G++ GEF++T GD HLY NH EQA LQL R+PRTLP+M INP++ D+ 
Sbjct: 181 YSLLLMMVAQVTGYEPGEFVYTTGDTHLYLNHLEQAQLQLQRTPRTLPKMRINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDFTL  Y P+  I A+VSV
Sbjct: 241 SFKYEDFTLEDYNPYDHIKAQVSV 264


>gi|7766859|pdb|1EV5|A Chain A, Crystal Structure Analysis Of Ala167 Mutant Of Escherichia
           Coli
          Length = 264

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 200/263 (76%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRAXDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|224471861|sp|Q2W7P4|TYSY_MAGMM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 264

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 165/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQYLDLLR +   G  + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H +S+  ELL
Sbjct: 1   MHQYLDLLRRIQAEGVTKTDRTGTGTTSVFGHQMRFDLSRGFPLVTTKKLHTRSIFVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L  + VSIWDEWAD +G+LGP+YG QWRSW   DG+ +DQI+ +V+ +R
Sbjct: 61  WFLRGDTNIGWLKDNKVSIWDEWADANGDLGPVYGKQWRSWACPDGSTVDQITQVVEMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A I+ MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G F+HT GD HLY+NH EQA LQLSR+P  LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQVTGLEVGAFVHTFGDAHLYSNHMEQAALQLSRAPLPLPRLELNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D  +  Y+ HA I A V+V
Sbjct: 241 AFTMDDIKVVDYQCHAHIAAPVAV 264


>gi|56477943|ref|YP_159532.1| thymidylate synthase [Aromatoleum aromaticum EbN1]
 gi|62901201|sp|Q5P233|TYSY_AZOSE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|56313986|emb|CAI08631.1| Thymidylate synthase [Aromatoleum aromaticum EbN1]
          Length = 264

 Score =  391 bits (1004), Expect = e-107,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV+  G  + DRTG GT S FG+QMRF+L  GFPLLTTKK+H +S++HELL
Sbjct: 1   MKQYLDLMRHVLDHGDRKSDRTGTGTLSIFGWQMRFNLDDGFPLLTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL+ +GVSIWD+WAD++G+LGP+YG QWR W   +G  IDQI+ ++  L+
Sbjct: 61  WFLRGDTNIRYLNENGVSIWDDWADENGDLGPVYGKQWRRWETANGATIDQIAQLIDGLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRH+VSAWN   +  MALPPCH LFQFYV   +LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRHLVSAWNPGEVAGMALPPCHALFQFYVAGDRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + G+F+ T GD HLY NH +QA LQLSR PR LP+MI+NP + D+ 
Sbjct: 181 YALLTLMVAQVCGLRAGDFVWTGGDCHLYLNHLDQARLQLSRQPRALPRMIVNPGVTDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+EDF L  Y+PH  I A+V+V
Sbjct: 241 GFRFEDFRLEGYDPHPHIKAEVAV 264


>gi|114319533|ref|YP_741216.1| thymidylate synthase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312527|sp|Q0ABR1|TYSY_ALHEH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|114225927|gb|ABI55726.1| thymidylate synthase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 264

 Score =  391 bits (1004), Expect = e-107,   Method: Composition-based stats.
 Identities = 165/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+ HV   G+ + DRTG GT S FG+QMRFDLS+GFP++TTKK+H +S++HELL
Sbjct: 1   MQAYLDLMAHVRHHGTPKSDRTGTGTLSVFGHQMRFDLSRGFPVVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GDSN++YL  +GVSIWDEWAD++G+LGPIYGVQWRSWP  DG  +DQ++ +++ LR
Sbjct: 61  WFLSGDSNIAYLKANGVSIWDEWADENGDLGPIYGVQWRSWPTPDGRRVDQLAQVLRDLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRRH+VSAWNV  +  MALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 EHPDSRRHLVSAWNVGELPNMALPPCHTLFQFYVAEGRLSCQLYQRSADIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + GEFI T GD HLY NH EQAD QL R P  LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQVCDLKPGEFIWTGGDCHLYTNHLEQADRQLQREPLPLPRLRLNPEVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYED  L  Y+ H  I A V+V
Sbjct: 241 AFRYEDIALEGYQHHPPIKAPVAV 264


>gi|319903078|ref|YP_004162806.1| thymidylate synthase [Bacteroides helcogenes P 36-108]
 gi|319418109|gb|ADV45220.1| thymidylate synthase [Bacteroides helcogenes P 36-108]
          Length = 264

 Score =  391 bits (1004), Expect = e-107,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF++ +GFP LTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLNRVLTEGAEKNDRTGTGTVSIFGHQMRFNMEEGFPCLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD++G+LG IYG QWRSWPDY G  IDQIS  V++++
Sbjct: 61  WFLKGDTNIKYLQDNGVRIWNEWADENGDLGHIYGYQWRSWPDYKGGFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ++ M LPPCH  FQFYV NGKLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLNNMNLPPCHAFFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL +M+A V G Q G+FIHTLGD H+Y NH EQ  LQL+R+P+ LP M INP++ ++ 
Sbjct: 181 YALLLLMMAQVTGLQAGDFIHTLGDAHIYLNHIEQVKLQLTRNPKPLPLMNINPDVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y PH  I  KV++
Sbjct: 241 DFKYEDFELVNYNPHPHIAGKVAI 264


>gi|51597348|ref|YP_071539.1| thymidylate synthase [Yersinia pseudotuberculosis IP 32953]
 gi|153947420|ref|YP_001399968.1| thymidylate synthase [Yersinia pseudotuberculosis IP 31758]
 gi|170023285|ref|YP_001719790.1| thymidylate synthase [Yersinia pseudotuberculosis YPIII]
 gi|186896455|ref|YP_001873567.1| thymidylate synthase [Yersinia pseudotuberculosis PB1/+]
 gi|62901276|sp|Q667F9|TYSY_YERPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166991232|sp|A7FFE0|TYSY_YERP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|51590630|emb|CAH22271.1| thymidylate synthase [Yersinia pseudotuberculosis IP 32953]
 gi|152958915|gb|ABS46376.1| thymidylate synthase [Yersinia pseudotuberculosis IP 31758]
 gi|169749819|gb|ACA67337.1| Thymidylate synthase [Yersinia pseudotuberculosis YPIII]
 gi|186699481|gb|ACC90110.1| thymidylate synthase [Yersinia pseudotuberculosis PB1/+]
          Length = 264

 Score =  391 bits (1004), Expect = e-107,   Method: Composition-based stats.
 Identities = 151/264 (57%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G+LGPIYG QWR+W   DG  IDQ+S++V  L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGDLGPIYGKQWRAWGAADGRKIDQLSNVVNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH +Q  LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQTHLQLSREPRALPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH  I A +++
Sbjct: 241 DYHFDDFDIEGYDPHPGIKAPIAI 264


>gi|163753075|ref|ZP_02160199.1| Thymidylate synthase [Kordia algicida OT-1]
 gi|161326807|gb|EDP98132.1| Thymidylate synthase [Kordia algicida OT-1]
          Length = 274

 Score =  390 bits (1003), Expect = e-107,   Method: Composition-based stats.
 Identities = 158/277 (57%), Positives = 211/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS++HELL
Sbjct: 1   MRQYLDLVKHVLEHGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWR+W   +   IDQ+S ++++L+
Sbjct: 61  WFIKGDTNIKYLQENGVRIWNEWADENGDLGPVYGHQWRNW---NSESIDQLSEVIETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMMVSAWNPSVLPNTKVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLTMM+A V G++YG+FIHT GD H+Y+NHFEQ  LQL+R P  L
Sbjct: 178 ADVFLGVPFNIASYALLTMMMAQVCGYEYGDFIHTFGDAHIYSNHFEQVKLQLTREPYPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP I  +  F +EDF L +Y+ H  I   V++
Sbjct: 238 PTMKINPEIKSIFDFTFEDFELVNYQHHPRIKGAVAI 274


>gi|312129644|ref|YP_003996984.1| thymidylate synthase [Leadbetterella byssophila DSM 17132]
 gi|311906190|gb|ADQ16631.1| thymidylate synthase [Leadbetterella byssophila DSM 17132]
          Length = 260

 Score =  390 bits (1003), Expect = e-107,   Method: Composition-based stats.
 Identities = 157/264 (59%), Positives = 205/264 (77%), Gaps = 4/264 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLRH++K G+ + DRTG GT S FGYQMRFDLSKGFPL+TTKK+H KS++HELL
Sbjct: 1   MQQYQDLLRHILKEGTQKTDRTGTGTLSVFGYQMRFDLSKGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ GD+N+ YL  +GVSIWDEWA+++G+LGP+YG QWR+W D     IDQ+  ++ +++
Sbjct: 61  WFINGDTNIKYLKDNGVSIWDEWANENGDLGPVYGKQWRAWND----EIDQLKEVINTIK 116

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV+ + +MAL PCH LFQFYV + KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 117 HNPDSRRMIVSAWNVSDLPRMALMPCHALFQFYVADNKLSCQLYQRSADVFLGVPFNIAS 176

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G + G+F+ T GD HLY NH EQ + QL R+P+ LP M +NP++  + 
Sbjct: 177 YALLTMMIAQECGLELGDFVWTGGDTHLYLNHLEQVNKQLERTPKALPIMKLNPDVKSVF 236

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+P+  I A V+V
Sbjct: 237 DFKFEDFELVNYDPYPGIKAPVAV 260


>gi|207743702|ref|YP_002260094.1| thymidylate synthase (ts) (tsase) protein [Ralstonia solanacearum
           IPO1609]
 gi|206595101|emb|CAQ62028.1| thymidylate synthase (ts) (tsase) protein [Ralstonia solanacearum
           IPO1609]
          Length = 276

 Score =  390 bits (1003), Expect = e-107,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV + G+D+ DRTG GTRS FG+QMRFDL +GFPL+TTKKVH KS+V+ELL
Sbjct: 13  MQPYLDLMRHVYEHGTDKADRTGTGTRSVFGHQMRFDLQQGFPLVTTKKVHIKSIVYELL 72

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L  +GV+IWDEWAD DGELGPIYG QWRSWP   G  IDQI+ ++  ++
Sbjct: 73  WFLQGATNVRWLQDNGVTIWDEWADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIK 132

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +M LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 133 RNPDSRRLIVSAWNVGDIPRMKLPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 192

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A       G+F+ T GD HLYNNHFEQ + QL+R+P  LP++ I      + 
Sbjct: 193 YALLTHMIAQQTSLDVGDFVWTGGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIF 252

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +++EDF +  Y+ HAAI A V+V
Sbjct: 253 DYQFEDFEIVGYQSHAAIKAPVAV 276


>gi|255038746|ref|YP_003089367.1| thymidylate synthase [Dyadobacter fermentans DSM 18053]
 gi|254951502|gb|ACT96202.1| thymidylate synthase [Dyadobacter fermentans DSM 18053]
          Length = 273

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 167/273 (61%), Positives = 201/273 (73%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLRH++K G  + DRTG GT S FGYQMRFDL KGFPL+TTKKVH KS++HELL
Sbjct: 1   MQQYHDLLRHILKEGVRKTDRTGTGTISVFGYQMRFDLKKGFPLVTTKKVHTKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  H VSIWDEWAD++G+LGP+YG QWRSW   DG  +DQ+  +++ L+
Sbjct: 61  WFLQGDTNIGYLKEHNVSIWDEWADENGDLGPVYGKQWRSWAGPDGKSVDQLQEVLKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLYQRSGDVF 171
             P SRR IVSAWN A + +M L PCH LFQFYV          NGKLSCQLYQRS DVF
Sbjct: 121 NSPDSRRIIVSAWNPAELPQMKLHPCHALFQFYVAPPDTGAGETNGKLSCQLYQRSADVF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A       G+F+ T GD H+Y NH EQ + QLSR PR LPQMI
Sbjct: 181 LGVPFNIASYALLTMMIARECDLDLGDFVWTGGDTHIYLNHLEQVETQLSREPRALPQMI 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +NP + ++L FRYEDF L +Y P   I A V+V
Sbjct: 241 LNPGVKNVLDFRYEDFELVNYNPWPGIKAPVAV 273


>gi|282881638|ref|ZP_06290301.1| thymidylate synthase [Prevotella timonensis CRIS 5C-B1]
 gi|281304397|gb|EFA96494.1| thymidylate synthase [Prevotella timonensis CRIS 5C-B1]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 165/264 (62%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+ ++  G ++ DRTG GT+S FG+QMRF++  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MQPYLNLLQRILDEGIEKTDRTGTGTKSIFGHQMRFNMEDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGV IWDEWAD+DG LGP+YG QWRSWPDY+G  IDQI +++  ++
Sbjct: 61  WFLKGDTNIKYLKEHGVRIWDEWADEDGNLGPVYGHQWRSWPDYNGGTIDQIQNVINLIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +V+AWN A I++MALPPCHCLFQFYV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 HHPDSRRMMVTAWNPAEIEQMALPPCHCLFQFYVADGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G Q GEFIHT GD HLY NH EQA LQL+R+PRTLPQM +NP++  L 
Sbjct: 181 YALLLQMMAQVTGLQVGEFIHTTGDTHLYLNHIEQAKLQLTRTPRTLPQMKLNPDVKSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L++Y P   I A V+V
Sbjct: 241 DFQYEDFELQNYNPWPHIKADVAV 264


>gi|198276921|ref|ZP_03209452.1| hypothetical protein BACPLE_03126 [Bacteroides plebeius DSM 17135]
 gi|198270446|gb|EDY94716.1| hypothetical protein BACPLE_03126 [Bacteroides plebeius DSM 17135]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 165/264 (62%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +   G  + DRTG GT S FG+QMRF+L +GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLHRIRTEGVRKEDRTGTGTISVFGHQMRFNLEEGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LG IYG QWRSWP YDG  IDQIS  V++++
Sbjct: 61  WFLQGDTNVKYLQENGVRIWNEWADENGDLGHIYGYQWRSWPGYDGKFIDQISEAVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ++ M LPPCH  FQFYV NG+LS Q+YQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVSAWNVGDLNNMNLPPCHAFFQFYVANGRLSLQMYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + G+FIHTLGD H+Y NH EQ DLQL+R+PR LP M INP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLKAGDFIHTLGDAHIYLNHLEQVDLQLTRTPRPLPTMKINPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF YEDF L +Y+P   I  KVSV
Sbjct: 241 SFHYEDFQLENYDPWPHIAGKVSV 264


>gi|325298388|ref|YP_004258305.1| Thymidylate synthase [Bacteroides salanitronis DSM 18170]
 gi|324317941|gb|ADY35832.1| Thymidylate synthase [Bacteroides salanitronis DSM 18170]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR +   G  + DRTG GT S FG+QMRF+L+ GFPL+TTKK+H KS++HELL
Sbjct: 1   MKQYLDLLRRIRTEGVQKHDRTGTGTISIFGHQMRFNLADGFPLVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L GD+NV YL  +GV IW+EWAD DG LG IYG QWRSWPDY+G VIDQI+  V+++R
Sbjct: 61  WMLSGDTNVHYLQENGVRIWNEWADADGNLGHIYGYQWRSWPDYEGGVIDQIAEAVETIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWNVA +  M LPPCH  FQFYV +GKLS Q+YQRS D FLG+PFNIAS
Sbjct: 121 HNPDSRRIIVNAWNVADLKNMNLPPCHMFFQFYVADGKLSLQMYQRSADCFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHTLGD H+Y NH EQ DLQL+R PR LP+M +NP++ D+ 
Sbjct: 181 YALLLQMMAQVTGLEAGEFIHTLGDAHIYLNHLEQVDLQLTREPRPLPKMRLNPDVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y P   I  KVSV
Sbjct: 241 GFKYEDFELTDYNPWPHIAGKVSV 264


>gi|110634102|ref|YP_674310.1| thymidylate synthase [Mesorhizobium sp. BNC1]
 gi|122965941|sp|Q11HI0|TYSY_MESSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|110285086|gb|ABG63145.1| thymidylate synthase [Chelativorans sp. BNC1]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 172/264 (65%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ G DR DRTG GTR  FGYQMRFDLS GFP+LTTKK+H +S+++ELL
Sbjct: 1   MRQYLDLLAHVLENGIDREDRTGTGTRGVFGYQMRFDLSDGFPVLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI++++  LR
Sbjct: 61  WFLKGDTNIRYLQENGVTIWDEWADENGDLGPVYGAQWRSWPAPDGRHIDQIANLLNGLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +PYSRRHIV+AWN A ID MALPPCHCLFQF+V  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ENPYSRRHIVTAWNPAEIDGMALPPCHCLFQFHVAEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+F+HTLGD HLY NHF+QA  QL+R+P+ LP M INP + DL 
Sbjct: 181 YALLTMMIAQVTGLKPGDFVHTLGDAHLYKNHFDQAREQLTRTPKPLPTMWINPEVDDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F YEDF L  Y     I A ++V
Sbjct: 241 AFGYEDFRLEGYVADPTIRAPIAV 264


>gi|220913475|ref|YP_002488784.1| thymidylate synthase [Arthrobacter chlorophenolicus A6]
 gi|219860353|gb|ACL40695.1| Thymidylate synthase [Arthrobacter chlorophenolicus A6]
          Length = 267

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 155/261 (59%), Positives = 198/261 (75%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GT S FG Q+RFDL++GFPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YEDLLRDVLAQGTHKSDRTGTGTTSVFGRQIRFDLAEGFPLITTKRVHFKSVAVELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV ++   GV+IW+EWAD+DG+LGP+YGVQWRSWP  DG  IDQI+ +V++L+A+P
Sbjct: 67  RGETNVKWMQDQGVTIWNEWADEDGDLGPVYGVQWRSWPTPDGGHIDQIAELVENLKANP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHIVSAWNV+ ++ MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRHIVSAWNVSELNDMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA  +G + GEF+ T GDVH+Y NH +Q   QL R P   PQ+ IN     +  + 
Sbjct: 187 LTYMLAQQVGLEPGEFVWTGGDVHIYENHMDQVLKQLEREPYEYPQLKINRKPASIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            EDF +  Y+ H  I A ++V
Sbjct: 247 LEDFEVVGYKHHPTIKAPIAV 267


>gi|148560322|ref|YP_001259294.1| thymidylate synthase [Brucella ovis ATCC 25840]
 gi|166231694|sp|A5VRE7|TYSY_BRUO2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148371579|gb|ABQ61558.1| thymidylate synthase [Brucella ovis ATCC 25840]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 219/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDHGVDRDDRTGTGTRSAFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 61  WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264


>gi|194364440|ref|YP_002027050.1| thymidylate synthase [Stenotrophomonas maltophilia R551-3]
 gi|194347244|gb|ACF50367.1| Thymidylate synthase [Stenotrophomonas maltophilia R551-3]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKAYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGGEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QLSR PR LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++D  +  Y+PH AI A V+V
Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264


>gi|238783710|ref|ZP_04627730.1| Thymidylate synthase [Yersinia bercovieri ATCC 43970]
 gi|238715423|gb|EEQ07415.1| Thymidylate synthase [Yersinia bercovieri ATCC 43970]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKDDRTGTGTVSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S++V+ L+
Sbjct: 61  WFLNGDTNIGYLKENSVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSNVVKQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP++II      L 
Sbjct: 181 YALLIHMMAQQCDLDVGDFVWTGGDTHLYSNHIEQTHLQLSREPRALPKLIIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH  I A +++
Sbjct: 241 DYHFDDFEIEGYDPHPGIKAPIAI 264


>gi|242240430|ref|YP_002988611.1| thymidylate synthase [Dickeya dadantii Ech703]
 gi|242132487|gb|ACS86789.1| thymidylate synthase [Dickeya dadantii Ech703]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 149/264 (56%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G LGP+YG QWR+W   DG  IDQ+ +++  L+
Sbjct: 61  WFLNGDTNIGYLRDNKVSIWDEWADENGNLGPVYGKQWRAWGAADGRQIDQLQTVLHQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQL R PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHLEQTRLQLGREPRPLPKLVIKRRPESLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF +  Y+PH AI A V++
Sbjct: 241 DYQFDDFDIDGYDPHPAIKAPVAI 264


>gi|1359501|emb|CAA90532.1| thymidylate synthetase [Bacillus amyloliquefaciens]
          Length = 282

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L  GFP+LTTKK+H+KS+ HELL
Sbjct: 19  MKQYKDLCRHVLENGEKKGDRTGTGTISTFGYQMRFNLQGGFPMLTTKKLHFKSIAHELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS ++  ++
Sbjct: 79  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIHDIK 138

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  ID+MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 139 TNPNSRRLIVSAWNVGEIDRMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 198

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HT GDVH+Y NH EQ +LQL+R  R LP++    N+  + 
Sbjct: 199 YALLTMMIAHVTGLEPGEFVHTFGDVHIYQNHVEQVNLQLTRDVRPLPKLRFARNVDSIF 258

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +EDF +  Y+PH  I   VSV
Sbjct: 259 DFAFEDFIIEDYDPHPHIKGAVSV 282


>gi|46203405|ref|ZP_00208952.1| COG0207: Thymidylate synthase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 290

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 160/262 (61%), Positives = 200/262 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL  ++  G  + DRTG GT S FG+QMRFDL++GFPL+TTK++H +S++HELL
Sbjct: 18  MRAYHDLLDRILTEGLRKDDRTGTGTLSVFGHQMRFDLAEGFPLVTTKQLHLRSIIHELL 77

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD DG LGP+YG QWRSW    G  +DQI+ ++  + 
Sbjct: 78  WFLQGDTNIAYLKENGVTIWDEWADADGNLGPVYGKQWRSWEKPSGGTVDQIAWVLGEIA 137

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 138 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 197

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G   G+F+HTLGD HLY NH EQA LQLSR PR LP++ +NP +  L 
Sbjct: 198 YALLTAMMAQVTGLAPGDFVHTLGDAHLYVNHLEQARLQLSREPRALPRLRLNPEVRSLF 257

Query: 241 SFRYEDFTLRSYEPHAAILAKV 262
            FR+ED  +  Y+PH AI A V
Sbjct: 258 DFRFEDIAIEGYDPHPAIKAPV 279


>gi|89100587|ref|ZP_01173446.1| thymidylate synthase [Bacillus sp. NRRL B-14911]
 gi|89084691|gb|EAR63833.1| thymidylate synthase [Bacillus sp. NRRL B-14911]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L RHV++ G+ + DRTG GT STFGYQMRFDL +GFPL+TTKK+H +S++HELL
Sbjct: 1   MEQYLQLCRHVLEKGTIKEDRTGTGTISTFGYQMRFDLKEGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW+EWAD++G LGP+YG QWRSW   DG  +DQIS ++ S++
Sbjct: 61  WFLNGDTNVKYLQDNGVRIWNEWADEEGNLGPVYGHQWRSWTGADGKTVDQISELISSIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IV+AWNV+ I  MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVNAWNVSEIGNMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + GEFIH+ GDVH+Y NH EQ +LQLSR P  LPQ+     + D+ 
Sbjct: 181 YALLTHMVAHVCDLEPGEFIHSFGDVHIYRNHLEQVNLQLSREPFKLPQLKFARKVEDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDF L  YE H  I   VSV
Sbjct: 241 SFKYEDFILEGYESHPHIKGVVSV 264


>gi|16079241|ref|NP_390065.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310096|ref|ZP_03591943.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221323615|ref|ZP_03604909.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|136604|sp|P11044|TYSY2_BACSU RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2;
           AltName: Full=Thymidylate synthase B; Short=TS B;
           Short=TSase B
 gi|143741|gb|AAA22852.1| thymidylate synthase B (thyB) [Bacillus subtilis]
 gi|1256640|gb|AAA96634.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634602|emb|CAB14100.1| thymidylate synthase B [Bacillus subtilis subsp. subtilis str. 168]
          Length = 264

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D  RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDFCRHVLEHGEKKGDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTM++A V G + GEFIHT GDVH+Y NH EQ +LQL R  R LPQ+     +  + 
Sbjct: 181 YALLTMIIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLERDVRPLPQLRFARKVDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF +  Y+PH  I   VSV
Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264


>gi|162139863|ref|YP_412649.2| thymidylate synthase [Nitrosospira multiformis ATCC 25196]
          Length = 264

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G  + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H KS+++ELL
Sbjct: 1   MRQYLDLMQHVLEHGQKKSDRTGTGTLSVFGYQMRFDLSEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ + VSIWDEWAD++G+LGPIYG QWRSWP+  G  IDQI  +V+ +R
Sbjct: 61  WFLKGDTNIRYLNENDVSIWDEWADENGDLGPIYGRQWRSWPNGKGGHIDQIEQVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VS+WNV  + +M L PCH LFQFYV   KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NTPDSRRMLVSSWNVGELQEMKLAPCHALFQFYVAEDKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+MLA     + GEF+HT GD HLY NH EQA  QL R P+ LP M +NP I ++ 
Sbjct: 181 YALLTLMLAQSCDLRAGEFVHTFGDAHLYLNHLEQAREQLERGPKKLPIMKLNPAIRNVF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH +I A ++V
Sbjct: 241 DFRYEDFNLEGYDPHPSIKAPIAV 264


>gi|294054859|ref|YP_003548517.1| thymidylate synthase [Coraliomargarita akajimensis DSM 45221]
 gi|293614192|gb|ADE54347.1| thymidylate synthase [Coraliomargarita akajimensis DSM 45221]
          Length = 264

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR V++ G+ R DRTG GT S FG Q RF LS  FPLLTTKK+H +S++HELL
Sbjct: 1   MKSYLDLLRTVLETGTFRDDRTGTGTYSIFGAQARFSLSPDFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++G++N+ YL  + V IWDEWAD++G+LG +YG QWR W   +G  +DQ++ ++ +++
Sbjct: 61  WFIQGNTNIQYLKDNKVRIWDEWADENGDLGRVYGAQWRDWAAPNGEHVDQLADVIDAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIV AWN   I  MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVCAWNPGEIKHMALPPCHALFQFYVADGELSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   +  EF+HT GD+HLY NH +QA  QLSR PR LPQM +NP++  + 
Sbjct: 181 YALLTMMIAQVCNLKPKEFVHTFGDLHLYANHVDQAKEQLSREPRALPQMKLNPDVHSIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L +Y+PH  I A ++V
Sbjct: 241 DFKFEDFELVNYDPHPTIKAPIAV 264


>gi|83648497|ref|YP_436932.1| thymidylate synthase [Hahella chejuensis KCTC 2396]
 gi|123753522|sp|Q2SA17|TYSY_HAHCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|83636540|gb|ABC32507.1| Thymidylate synthase [Hahella chejuensis KCTC 2396]
          Length = 264

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 158/264 (59%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++RHV + G+ + DRTG GTRS FGYQMRFDL +GFPL+TTKK+H +S+++ELL
Sbjct: 1   MKQYLDMMRHVREQGAVKTDRTGTGTRSVFGYQMRFDLQQGFPLVTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD+ G+LGP+YG QWRSWP  +G  IDQIS+++  ++
Sbjct: 61  WFLNGDTNIKYLKDNGVSIWDEWADESGDLGPVYGYQWRSWPAPNGEHIDQISNVLAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRH+V A+N A +D+MALPPCH +FQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRHMVVAYNPAFVDQMALPPCHAMFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M A       G+FI T GDVHLYNNH +QA  QL R PR LPQ+ I      L 
Sbjct: 181 YALLTHMFAQQCDLDVGDFIWTGGDVHLYNNHLDQAKEQLDREPRPLPQLQIRRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+PH  I A V+V
Sbjct: 241 DYEFEDFEITGYDPHPHIKAPVAV 264


>gi|319899133|ref|YP_004159226.1| Thymidylate synthase [Bartonella clarridgeiae 73]
 gi|319403097|emb|CBI76655.1| Thymidylate synthase [Bartonella clarridgeiae 73]
          Length = 264

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 180/264 (68%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+K G DR DRTGVGTRS FGYQMRF+L  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKAYLDLLFHVLKNGIDRLDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADK+G+LGPIYG QWRSWP  DG  IDQIS+++  ++
Sbjct: 61  WFLKGDTNIAWLKEHGVSIWDEWADKEGDLGPIYGYQWRSWPAPDGRHIDQISNLLTMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALID+MALPPCHCLFQFYV  GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALIDEMALPPCHCLFQFYVAAGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A +   Q G+FIHT GD HLY NHFEQA+ QLSR+P  LP M+INP + DL 
Sbjct: 181 YALLTMMIAQITNLQVGDFIHTFGDAHLYLNHFEQAEQQLSRTPSALPLMLINPAVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF +EDF L +YE    I A V+V
Sbjct: 241 SFTFEDFELLNYEALPHIKAPVAV 264


>gi|221314417|ref|ZP_03596222.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319340|ref|ZP_03600634.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. JH642]
          Length = 267

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D  RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 4   MKQYKDFCRHVLEHGEKKGDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 64  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 123

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 124 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 183

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTM++A V G + GEFIHT GDVH+Y NH EQ +LQL R  R LPQ+     +  + 
Sbjct: 184 YALLTMIIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLERDVRPLPQLRFARKVDSIF 243

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF +  Y+PH  I   VSV
Sbjct: 244 NFAFEDFIIEDYDPHPHIKGAVSV 267


>gi|22127047|ref|NP_670470.1| thymidylate synthase [Yersinia pestis KIM 10]
 gi|45442641|ref|NP_994180.1| thymidylate synthase [Yersinia pestis biovar Microtus str. 91001]
 gi|108806482|ref|YP_650398.1| thymidylate synthase [Yersinia pestis Antiqua]
 gi|108813148|ref|YP_648915.1| thymidylate synthase [Yersinia pestis Nepal516]
 gi|145598984|ref|YP_001163060.1| thymidylate synthase [Yersinia pestis Pestoides F]
 gi|150260199|ref|ZP_01916927.1| thymidylate synthase [Yersinia pestis CA88-4125]
 gi|162419494|ref|YP_001607589.1| thymidylate synthase [Yersinia pestis Angola]
 gi|165924834|ref|ZP_02220666.1| thymidylate synthase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939038|ref|ZP_02227590.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010315|ref|ZP_02231213.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212711|ref|ZP_02238746.1| thymidylate synthase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399795|ref|ZP_02305313.1| thymidylate synthase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418797|ref|ZP_02310550.1| thymidylate synthase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425231|ref|ZP_02316984.1| thymidylate synthase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470394|ref|ZP_02335098.1| thymidylate synthase [Yersinia pestis FV-1]
 gi|218927963|ref|YP_002345838.1| thymidylate synthase [Yersinia pestis CO92]
 gi|229837721|ref|ZP_04457881.1| thymidylate synthetase [Yersinia pestis Pestoides A]
 gi|229840685|ref|ZP_04460844.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842759|ref|ZP_04462913.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903591|ref|ZP_04518704.1| thymidylate synthetase [Yersinia pestis Nepal516]
 gi|270487374|ref|ZP_06204448.1| thymidylate synthase [Yersinia pestis KIM D27]
 gi|294503029|ref|YP_003567091.1| thymidylate synthase [Yersinia pestis Z176003]
 gi|20455349|sp|Q8ZHV1|TYSY_YERPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|122979996|sp|Q1CFB5|TYSY_YERPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123245978|sp|Q1CAR9|TYSY_YERPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231745|sp|A4TLC5|TYSY_YERPP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|21960098|gb|AAM86721.1|AE013918_5 thymidylate synthetase [Yersinia pestis KIM 10]
 gi|45437506|gb|AAS63057.1| thymidylate synthase [Yersinia pestis biovar Microtus str. 91001]
 gi|108776796|gb|ABG19315.1| thymidylate synthase [Yersinia pestis Nepal516]
 gi|108778395|gb|ABG12453.1| thymidylate synthase [Yersinia pestis Antiqua]
 gi|115346574|emb|CAL19455.1| thymidylate synthase [Yersinia pestis CO92]
 gi|145210680|gb|ABP40087.1| thymidylate synthase [Yersinia pestis Pestoides F]
 gi|149289607|gb|EDM39684.1| thymidylate synthase [Yersinia pestis CA88-4125]
 gi|162352309|gb|ABX86257.1| thymidylate synthase [Yersinia pestis Angola]
 gi|165912994|gb|EDR31619.1| thymidylate synthase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165923034|gb|EDR40185.1| thymidylate synthase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990801|gb|EDR43102.1| thymidylate synthase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206003|gb|EDR50483.1| thymidylate synthase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962791|gb|EDR58812.1| thymidylate synthase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050503|gb|EDR61911.1| thymidylate synthase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055631|gb|EDR65415.1| thymidylate synthase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229679361|gb|EEO75464.1| thymidylate synthetase [Yersinia pestis Nepal516]
 gi|229690239|gb|EEO82294.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697051|gb|EEO87098.1| thymidylate synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704098|gb|EEO91110.1| thymidylate synthetase [Yersinia pestis Pestoides A]
 gi|262361065|gb|ACY57786.1| thymidylate synthase [Yersinia pestis D106004]
 gi|262365008|gb|ACY61565.1| thymidylate synthase [Yersinia pestis D182038]
 gi|270335878|gb|EFA46655.1| thymidylate synthase [Yersinia pestis KIM D27]
 gi|294353488|gb|ADE63829.1| thymidylate synthase [Yersinia pestis Z176003]
 gi|320014147|gb|ADV97718.1| thymidylate synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 264

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTPKADRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL  + VSIWDEWAD++G+LGPIYG QWR+W   DG  IDQ+S++V  L+
Sbjct: 61  WFLNGDTNIAYLKENNVSIWDEWADENGDLGPIYGKQWRAWGAADGRKIDQLSNVVNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH +QA LQLSR PR LP+++I      L 
Sbjct: 181 YALLVHMMAQQCDLAVGDFVWTGGDTHLYSNHIDQAHLQLSREPRVLPKLVIKRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF +  Y+PH  I A +++
Sbjct: 241 DYHFDDFDIEGYDPHPGIKAPIAI 264


>gi|321311648|ref|YP_004203935.1| thymidylate synthase [Bacillus subtilis BSn5]
 gi|320017922|gb|ADV92908.1| thymidylate synthase [Bacillus subtilis BSn5]
          Length = 267

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF+L +GFP+LTTKK+H+KS+ HELL
Sbjct: 4   MKQYKDLCRHVLEHGEKKEDRTGTGTISTFGYQMRFNLREGFPMLTTKKLHFKSIAHELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 64  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 123

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 124 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 183

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL R  R LPQ+     +  + 
Sbjct: 184 YALLTMMIAHVTGLESGEFIHTFGDVHIYQNHIEQINLQLERDVRPLPQLRFARKVDSIF 243

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF +  Y+PH  I   VSV
Sbjct: 244 NFAFEDFIIEDYDPHPHIKGAVSV 267


>gi|190572858|ref|YP_001970703.1| thymidylate synthase [Stenotrophomonas maltophilia K279a]
 gi|190010780|emb|CAQ44389.1| putative thymidylate synthase [Stenotrophomonas maltophilia K279a]
          Length = 264

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKAYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGREIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QLSR PR LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++D  +  Y+PH AI A V+V
Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264


>gi|258652990|ref|YP_003202146.1| thymidylate synthase [Nakamurella multipartita DSM 44233]
 gi|258556215|gb|ACV79157.1| thymidylate synthase [Nakamurella multipartita DSM 44233]
          Length = 264

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 214/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  ++  G+ + DRTG GTRS FG+QMRFDLS GFPL+TTKKVH +SV+ ELL
Sbjct: 1   MQQYLDLMDRILTTGAVKSDRTGTGTRSIFGHQMRFDLSAGFPLVTTKKVHTRSVIVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +NV +L   GV+IWDEWAD DGELGP+YG QWRSWP  DG  IDQI+ +V+SLR
Sbjct: 61  WFLQGSTNVHWLQERGVTIWDEWADADGELGPVYGHQWRSWPAPDGRHIDQIAGLVRSLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRRHIVSAWNVA +D+MALPPCH +FQFYV +G LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRHIVSAWNVAEVDQMALPPCHTMFQFYVADGALSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V+G + GEFIHTLGD HLY NH +QA LQL+R+PR LP++ + P++ ++ 
Sbjct: 181 YALLTGMMAQVVGLRPGEFIHTLGDAHLYANHLDQARLQLTRAPRPLPELELKPDVTEID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D  +R+Y+PH AI A ++V
Sbjct: 241 AFTVDDIVIRNYDPHPAIKAPIAV 264


>gi|196249232|ref|ZP_03147931.1| Thymidylate synthase [Geobacillus sp. G11MC16]
 gi|196211461|gb|EDY06221.1| Thymidylate synthase [Geobacillus sp. G11MC16]
          Length = 284

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 150/264 (56%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           + QYL LL  +++ G ++ DRTGVGT S FG Q+RF+L  GFPL+TTKK+H +S+++ELL
Sbjct: 21  LRQYLQLLEDILENGVEKEDRTGVGTLSVFGRQLRFNLQDGFPLVTTKKLHIRSIIYELL 80

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV+IWDEWAD++G+LGP+YG QWRSW   DG  +DQI+S+V+ ++
Sbjct: 81  WFLKGDTNVRYLQENGVTIWDEWADENGDLGPVYGAQWRSWKGADGKTVDQIASVVEEIK 140

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWNVA +DKM LPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 141 RNPNSRRLLVNAWNVAELDKMKLPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 200

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   GE I T GDVHLY NH EQA LQL+R PR LP++++      + 
Sbjct: 201 YALLTHMIAEQCGLDVGELIFTGGDVHLYKNHIEQAKLQLTREPRPLPKLVLKRKPSSIF 260

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF +  Y+PH  I A V+V
Sbjct: 261 DYEYDDFEIVGYDPHPTIKAPVAV 284


>gi|161619346|ref|YP_001593233.1| thymidylate synthase [Brucella canis ATCC 23365]
 gi|189036928|sp|A9M657|TYSY_BRUC2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|161336157|gb|ABX62462.1| Thymidylate synthase [Brucella canis ATCC 23365]
          Length = 264

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 175/264 (66%), Positives = 218/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV+  G DR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MRTYLDLLQHVLDHGVDRDDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV+IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++++ L 
Sbjct: 61  WFLKGDTNIAYLKENGVTIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANLLKMLH 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SR  IVSAWN AL+D+MALPPCHCLFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPQSRSLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHTLGD H+Y+NHFEQA LQL+R+P+ LP M INP++ DL 
Sbjct: 181 YALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+EDF L  YE    I A ++V
Sbjct: 241 AFRFEDFRLDGYEADPTIKAPIAV 264


>gi|297564578|ref|YP_003683550.1| thymidylate synthase [Meiothermus silvanus DSM 9946]
 gi|296849027|gb|ADH62042.1| thymidylate synthase [Meiothermus silvanus DSM 9946]
          Length = 264

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y +L+R+V++ G  + DRTGVGTRS FGYQMRFDL +GFPL+TTKKVHWKSVV+ELL
Sbjct: 1   MQAYHELMRYVLEHGVPKSDRTGVGTRSIFGYQMRFDLQEGFPLVTTKKVHWKSVVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  HGVSIWDEWAD+ GELGPIYG QWRSW    G  +DQI+ ++Q +R
Sbjct: 61  WFLRGDTNIRYLKEHGVSIWDEWADESGELGPIYGKQWRSWEGPGGKTVDQIAWVLQEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + KMAL PCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 RNPDSRRMVVSAWNVADLPKMALAPCHTLFQFYVSGGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEFIHTLGD HLYNNH EQA +QL+R PR LP + +NP + DL 
Sbjct: 181 YALLTLMIAHVSGLEPGEFIHTLGDAHLYNNHLEQARIQLAREPRPLPTVRLNPGLRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYED  L  Y PH  I A V+V
Sbjct: 241 AFRYEDIVLEGYHPHPPIPAPVAV 264


>gi|85059955|ref|YP_455657.1| thymidylate synthase [Sodalis glossinidius str. 'morsitans']
 gi|123738935|sp|Q2NRH3|TYSY_SODGM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|84780475|dbj|BAE75252.1| thymidylate synthase [Sodalis glossinidius str. 'morsitans']
          Length = 264

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V   G+ + DRTG GT S FG+QMRFDL +GF L+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMRRVRAQGTPKADRTGTGTLSIFGHQMRFDLRQGFLLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL ++ VSIWDEWAD +G+LGP+YG QWR+W   DG  IDQ++ +V+ L+
Sbjct: 61  WFLNGDTNIAYLQQNNVSIWDEWADDNGDLGPVYGRQWRAWGTSDGRQIDQLAEVVRQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH LFQFYV NG LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QDPDSRRIIVSAWNVGELDKMALAPCHALFQFYVANGTLSCQLYQRSCDIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  MLA     Q G+F+ T GD HLY+NH +QADLQL+R P  LPQ++I      L 
Sbjct: 181 YALLVHMLAQQCDLQVGDFVWTGGDTHLYSNHLQQADLQLTRDPLPLPQLLIKRRPATLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF L  Y+PH AI A V+V
Sbjct: 241 DYRFEDFELTGYDPHPAIKAPVAV 264


>gi|160900402|ref|YP_001565984.1| thymidylate synthase [Delftia acidovorans SPH-1]
 gi|160365986|gb|ABX37599.1| Thymidylate synthase [Delftia acidovorans SPH-1]
          Length = 274

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 156/262 (59%), Positives = 194/262 (74%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV + G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF
Sbjct: 13  QYEDFMRHVYEHGVSKTDRTGTGTRSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 72

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L   G +IW+EWA +DG+LGP+YGVQWR+WP  DG  IDQI+ +V+ L+++
Sbjct: 73  LRGDSNVRWLQERGCTIWNEWAREDGDLGPVYGVQWRNWPTPDGGHIDQIAEVVKQLKSN 132

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA + +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 133 PDSRRIIVSAWNVADLPQMALMPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIASYA 192

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT MLA     Q G+F+ T GD H+YNNHF Q + QL+R P   P + I      +  +
Sbjct: 193 LLTHMLAQQCDLQVGDFVWTGGDCHIYNNHFAQVETQLARQPFAYPTLQIKRRPDSIFGY 252

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YEDF +  Y+ H  I A V+V
Sbjct: 253 EYEDFEVVGYQHHEPIKAPVAV 274


>gi|261855508|ref|YP_003262791.1| thymidylate synthase [Halothiobacillus neapolitanus c2]
 gi|261835977|gb|ACX95744.1| thymidylate synthase [Halothiobacillus neapolitanus c2]
          Length = 264

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ V++ G DR DRTG GTRS FGYQMRFDL  GFP LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLQKVMEQGVDRGDRTGTGTRSLFGYQMRFDLEAGFPALTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  +GV IWDEWAD +G LGP+YG QWRSW   DG  IDQ+S ++  ++
Sbjct: 61  WFIQGDTNIRYLQENGVRIWDEWADAEGNLGPVYGKQWRSWATPDGRTIDQLSQVIHDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IV+AWN A +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TTPESRRLIVTAWNPADVPNMALPPCHLLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT+M+A V G + GEF+HTLGD H+Y+NHFEQA  QL R+P  LP M INP    + 
Sbjct: 181 YALLTLMIAQVTGLKPGEFVHTLGDAHIYHNHFEQARTQLERTPGKLPTMKINPERRSIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF ++DF L  Y P   I A V+V
Sbjct: 241 SFVFDDFVLEDYAPLPHIAAPVAV 264


>gi|296329488|ref|ZP_06871975.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674812|ref|YP_003866484.1| thymidylate synthase B [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|317412155|sp|E0U0H8|TYSY2_BACPZ RecName: Full=Thymidylate synthase 2; Short=TS 2; Short=TSase 2;
           AltName: Full=Thymidylate synthase B; Short=TS B;
           Short=TSase B
 gi|296153370|gb|EFG94232.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413056|gb|ADM38175.1| thymidylate synthase B [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 264

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLEHGEKKGDRTGTGTISTFGYQMRFHLQEGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL+R  R LP++     I  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLTRDVRPLPKLRFAREIDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF +  Y+PH  I   VSV
Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264


>gi|90019999|ref|YP_525826.1| thymidylate synthase [Saccharophagus degradans 2-40]
 gi|122996594|sp|Q21NW5|TYSY_SACD2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|89949599|gb|ABD79614.1| thymidylate synthase [Saccharophagus degradans 2-40]
          Length = 277

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 163/277 (58%), Positives = 204/277 (73%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RHV   G+ + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL
Sbjct: 1   MKQYLDLMRHVRDTGTKKEDRTGTGTVSVFGYQMRFDLSEGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N  YL  +GV IW+EWA ++G+LGP+YG QWRSWP  DG  +DQ + +V+ ++
Sbjct: 61  WFLKGETNTQYLTDNGVRIWNEWATEEGDLGPVYGAQWRSWPTPDGGSLDQFALLVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRRHI+SAWN AL+              KMALPPCH LFQFYV + KLSCQLYQRS
Sbjct: 121 NKPDSRRHIISAWNPALLPDEGVSPQDNVRNGKMALPPCHTLFQFYVADNKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G + G+F+HT GD HLY NH EQ + QL+R P  L
Sbjct: 181 ADIFLGVPFNIASYALLTMMVAQVTGLELGDFVHTFGDAHLYLNHLEQVETQLAREPLPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP + D+ SF++EDF L  Y+ H  I A +S+
Sbjct: 241 PTMKINPEVKDIFSFKFEDFELVDYQAHPHISAPISI 277


>gi|170750914|ref|YP_001757174.1| thymidylate synthase [Methylobacterium radiotolerans JCM 2831]
 gi|170657436|gb|ACB26491.1| Thymidylate synthase [Methylobacterium radiotolerans JCM 2831]
          Length = 264

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLR ++  G  + DRTG GT S FG+QMRFDLS GFPL+TTK++H +S++HELL
Sbjct: 1   MDAYHDLLRRILDEGVAKDDRTGTGTLSVFGHQMRFDLSAGFPLVTTKRLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+ L  +GV+IWDEWAD +G+LGP+YG QWRSW    G  +DQI+ ++  +R
Sbjct: 61  WFLAGDTNVAALRANGVTIWDEWADANGDLGPVYGRQWRSWERPGGGTVDQIAWVLDEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D+MAL PCHCLFQFYV  G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLIVSAWNPADLDRMALAPCHCLFQFYVSEGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G   G F+HT GD HLY NH EQ    L RSPR LPQ+ +NP + DL 
Sbjct: 181 YALLTHMIAQVTGLGVGAFVHTFGDAHLYRNHLEQTRTLLGRSPRPLPQLRLNPEVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  + +Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIENYDPHPAIAAPVAV 264


>gi|254522948|ref|ZP_05135003.1| thymidylate synthase [Stenotrophomonas sp. SKA14]
 gi|219720539|gb|EED39064.1| thymidylate synthase [Stenotrophomonas sp. SKA14]
          Length = 264

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV++ G+++ DRTG GTRS FG+QMRF+L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLDLLSHVLEHGAEKSDRTGTGTRSVFGWQMRFNLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD++G+LGP+YG QWRSW   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLKDNQVRIWDEWADENGDLGPVYGKQWRSWATADGGAIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVGELSQMALMPCHNLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QLSR PR LP++ +NP++ DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLSREPRALPKLWLNPDVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++D  +  Y+PH AI A V+V
Sbjct: 241 GFQFDDIRIDGYDPHPAIKAPVAV 264


>gi|323344523|ref|ZP_08084748.1| thymidylate synthase [Prevotella oralis ATCC 33269]
 gi|323094650|gb|EFZ37226.1| thymidylate synthase [Prevotella oralis ATCC 33269]
          Length = 264

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 170/264 (64%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++K G  + DRTG GT S FG QMRF+L +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MRQYLDLLDRILKEGVKKGDRTGTGTISIFGNQMRFNLEEGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV +L  HGV IW+EWAD++G+LGP+YG QWRSWPDY G  IDQI +++  +R
Sbjct: 61  WFLKGDTNVRFLQEHGVRIWNEWADENGDLGPVYGHQWRSWPDYKGGTIDQIQNVLNQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A +D MALPPCHCLFQFYV NG+LS QLYQRS D FLG+PFNIAS
Sbjct: 121 QHPDSRRMIVSAWNPAEVDDMALPPCHCLFQFYVANGRLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM+A V G + G+FIHT GD HLY NH EQA LQLSR+PR LP+M++NP++ DL 
Sbjct: 181 YALLLMMMAQVTGLKAGDFIHTTGDTHLYLNHLEQAKLQLSRTPRALPKMLLNPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF L+ Y+P   I A+VSV
Sbjct: 241 AFHFEDFELKDYDPLPHISAQVSV 264


>gi|308069291|ref|YP_003870896.1| thymidylate synthase (TS) (TSase) [Paenibacillus polymyxa E681]
 gi|305858570|gb|ADM70358.1| Thymidylate synthase (TS) (TSase) [Paenibacillus polymyxa E681]
          Length = 264

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL  +++ G  + DRTG GT S FG Q+RFDL+KGFPL+TTK+VH KSV+HELL
Sbjct: 1   MRNYLELLEDILENGVKKEDRTGTGTLSVFGRQLRFDLAKGFPLVTTKRVHLKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD+ G LGP+YG QWRSW   DG  IDQI++++++++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADEQGNLGPVYGSQWRSWETTDGQHIDQIANVIEAIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA I+ M LPPCH +FQFYV  GKLSC L  RS D FLG+PFNIAS
Sbjct: 121 NNPDSRRHIVSAWNVAEIESMKLPPCHFVFQFYVAGGKLSCMLTMRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + GEFI + GDVH+Y+NH +Q   QL R P  LPQ+ I      + 
Sbjct: 181 YALLTHMVAQQCGLEPGEFIWSGGDVHIYSNHMQQVHTQLERDPYPLPQLKILRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF   +YE H  I A V++
Sbjct: 241 DYTYDDFAFENYEYHPGIKAPVAI 264


>gi|120434655|ref|YP_956876.1| thymidylate synthase [Gramella forsetii KT0803]
 gi|166231704|sp|A0LY29|TYSY_GRAFK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|117576805|emb|CAL65274.1| thymidylate synthase [Gramella forsetii KT0803]
          Length = 274

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 165/277 (59%), Positives = 212/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLLKHVLEQGAQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD +G+LGP+YG QWR+W   +G  IDQI  IV SL+
Sbjct: 61  WFLKGDTNIEYLKENGVRIWNEWADDNGDLGPVYGHQWRNW---NGEEIDQIKEIVHSLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 HNPNSRRMLVSAWNPSVLPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQVELQLSREPRQL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP + D+  F++EDFTL  Y+PH  I AKV++
Sbjct: 238 PIMKINPEVKDIFDFKFEDFTLEDYDPHPGIKAKVAI 274


>gi|88855422|ref|ZP_01130086.1| thymidylate synthase [marine actinobacterium PHSC20C1]
 gi|88815329|gb|EAR25187.1| thymidylate synthase [marine actinobacterium PHSC20C1]
          Length = 280

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 153/261 (58%), Positives = 195/261 (74%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR  +  G  + DRTG GTRS FG Q+RF+L++GFPL+TTK+VH+KS+ +ELLWFL
Sbjct: 20  YEDLLRDTLANGVHKSDRTGTGTRSVFGRQLRFNLAEGFPLITTKRVHFKSIAYELLWFL 79

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNVS+L  +GV+IW+EWAD+DGELGP+YGVQWRSWP   G  IDQIS ++  ++ +P
Sbjct: 80  RGESNVSWLRDNGVTIWNEWADEDGELGPVYGVQWRSWPTPSGEQIDQISEVIDQIKTNP 139

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWN A I +MAL PCH  FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 140 DSRRLIVSAWNPADIPQMALAPCHAFFQFYVANGKLSCQLYQRSADLFLGVPFNIASYAL 199

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G + G+F+ T GD H+Y+NH EQ   QL+R P   P++ I+     +  + 
Sbjct: 200 LTHMVAEQTGLEVGDFVWTGGDCHIYDNHIEQVTEQLTREPFGPPRLAISSTPDSVFGYA 259

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +EDF +  YE H AI A V+V
Sbjct: 260 FEDFEIVDYEHHPAIKAPVAV 280


>gi|311940|emb|CAA49350.1| thymidylate synthase B [Bacillus subtilis]
 gi|448267|prf||1916395A thymidylate synthase B
          Length = 264

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 169/264 (64%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL RHV++ G  + DRTG GT STFGYQMRF L +GFP+LTTKK+H+KS+ HELL
Sbjct: 1   MKQYKDLCRHVLEHGEKKGDRTGTGTISTFGYQMRFHLQEGFPMLTTKKLHFKSIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++GELGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 61  WFLKGDTNVRYLQENGVRIWNEWADENGELGPVYGSQWRSWRGADGETIDQISRLIEDIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  IDKMALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNVGEIDKMALPPCHCLFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEFIHT GDVH+Y NH EQ +LQL+R  R LP++     I  + 
Sbjct: 181 YALLTMMIAHVTGLEPGEFIHTFGDVHIYQNHIEQVNLQLTRDLRPLPKLRFAREIDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F +EDF +  Y+PH  I   VSV
Sbjct: 241 NFAFEDFIIEDYDPHPHIKGAVSV 264


>gi|319944036|ref|ZP_08018316.1| thymidylate synthase [Lautropia mirabilis ATCC 51599]
 gi|319742797|gb|EFV95204.1| thymidylate synthase [Lautropia mirabilis ATCC 51599]
          Length = 264

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 158/264 (59%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G  + DRTG GT S FG+QMRF L+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MKTYLDLLDHVLTHGVRKEDRTGTGTLSVFGHQMRFPLADGFPLLTTKKLHTRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD +G LGP+YG QWRSWP  DG  IDQIS +V+ +R
Sbjct: 61  WFLKGDTNIGYLRDNGVTIWDEWADAEGNLGPVYGAQWRSWPTPDGQHIDQISRVVEDIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  +  MALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RSPDSRRLIVSAWNVGELPHMALPPCHALFQFYVAEGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GEFI T GD HLY NH +QA LQLSR+PR LP++ +      + 
Sbjct: 181 YALLTHMVAQQTDLEPGEFIWTGGDCHLYLNHLDQARLQLSRTPRALPRLKLARRPESIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+P   I A ++V
Sbjct: 241 DYRFEDFVIEDYDPWPGIKAPIAV 264


>gi|254447388|ref|ZP_05060854.1| thymidylate synthase [gamma proteobacterium HTCC5015]
 gi|198262731|gb|EDY87010.1| thymidylate synthase [gamma proteobacterium HTCC5015]
          Length = 277

 Score =  388 bits (996), Expect = e-106,   Method: Composition-based stats.
 Identities = 156/277 (56%), Positives = 205/277 (74%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G  + DRTG GT S FG+QMRFDLS+GFP++TTKK+H +S+VHELL
Sbjct: 1   MKQYLELMQRVLDEGVRKDDRTGTGTLSVFGHQMRFDLSQGFPMVTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  +GVSIWDEWA ++G+LGP+YG QWRSW   +G V+DQI  ++  ++
Sbjct: 61  WFLKGETNIAYLKDNGVSIWDEWATEEGDLGPVYGKQWRSWEGPNGEVVDQIEQLIHDIK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN AL+              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 121 TNPDSRRLMVSAWNPALLPDTRKAPHENAADGKQALPPCHTLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GDVFLG+PFNIASY+LLT M+A V   + G+FIHTLGD HLY+NH EQ  LQLSR P  L
Sbjct: 181 GDVFLGVPFNIASYALLTCMVAQVCDLEVGDFIHTLGDAHLYSNHMEQTQLQLSRDPLPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +NP + ++  F ++D  +  Y+ H  I A V+V
Sbjct: 241 PRLKLNPAVKNIFEFTFDDIEVVDYQSHPHIKAPVAV 277


>gi|116671564|ref|YP_832497.1| thymidylate synthase [Arthrobacter sp. FB24]
 gi|171855203|sp|A0JZC7|TYSY_ARTS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116611673|gb|ABK04397.1| thymidylate synthase [Arthrobacter sp. FB24]
          Length = 267

 Score =  388 bits (996), Expect = e-106,   Method: Composition-based stats.
 Identities = 155/261 (59%), Positives = 194/261 (74%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GT S FG QMRFDLS+ FPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YEDLLRDVLANGTHKSDRTGTGTLSVFGRQMRFDLSQSFPLITTKRVHFKSVAVELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV ++   GV+IW+EWAD DGELGP+YGVQWRSWP  DG  IDQI+ +V++L+++P
Sbjct: 67  RGETNVKWMQDQGVTIWNEWADADGELGPVYGVQWRSWPTPDGGHIDQIAELVENLKSNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHIVSAWNVA +  MALPPCH  FQFYV +GKLSCQLYQRS D FLG+PFNIASY+L
Sbjct: 127 DSRRHIVSAWNVAELQDMALPPCHAFFQFYVADGKLSCQLYQRSADTFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA  +G + GEF+ T GDVH+Y+NH +Q   QL R P   PQ+ I      +  + 
Sbjct: 187 LTCMLAQQVGLEPGEFVWTGGDVHIYDNHMDQVLKQLKREPYEYPQLKILRKPDSIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            +DF +  Y+ H  I A ++V
Sbjct: 247 LDDFEVVGYQHHPTIKAPIAV 267


>gi|220920733|ref|YP_002496034.1| thymidylate synthase [Methylobacterium nodulans ORS 2060]
 gi|254790243|sp|B8IF20|TYSY_METNO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219945339|gb|ACL55731.1| thymidylate synthase [Methylobacterium nodulans ORS 2060]
          Length = 264

 Score =  388 bits (996), Expect = e-106,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLR ++  G  + DRTG GT S FG+QMRFDL++GFPL+TTK++H KS++HELL
Sbjct: 1   MRAYHDLLRRILDDGVAKHDRTGTGTLSVFGHQMRFDLAEGFPLVTTKRLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  +GV+IWDEWAD+ G+LGP+YG QWRSW   DG  +DQI+ ++  +R
Sbjct: 61  WFLAGDTNVAYLQSNGVTIWDEWADEHGDLGPVYGRQWRSWAKPDGGSVDQIAWVLDEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWN A +D+MAL PCHCLFQFY+   +LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNPADLDRMALAPCHCLFQFYIAERRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V+  + G+F+HTLGD HLY+NH  QA  QL+R  R LP++ +NP +  L 
Sbjct: 181 YALLTAMMAHVLDLEPGDFVHTLGDAHLYSNHVAQARQQLARDERPLPRLRLNPEVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRY+D  +  Y+PH AI A V+V
Sbjct: 241 DFRYDDVVIEGYDPHPAIRAPVAV 264


>gi|124267240|ref|YP_001021244.1| thymidylate synthase [Methylibium petroleiphilum PM1]
 gi|171769837|sp|A2SHH0|TYSY_METPP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|124260015|gb|ABM95009.1| thymidylate synthase [Methylibium petroleiphilum PM1]
          Length = 283

 Score =  388 bits (996), Expect = e-106,   Method: Composition-based stats.
 Identities = 159/269 (59%), Positives = 193/269 (71%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D LRHV   G  + DRTG GT S FG+QMRFDL +GFPL+TTKKVH KS+V ELLWF
Sbjct: 15  QYEDFLRHVRDHGVVKADRTGTGTTSVFGHQMRFDLREGFPLVTTKKVHLKSIVLELLWF 74

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD N ++L   GV+IWDEWA  DG+LGP+YGVQWRSWP  DG  +DQI+ +V+ L+ +
Sbjct: 75  LRGDGNATWLQERGVTIWDEWAAPDGDLGPVYGVQWRSWPTPDGGHVDQIAEVVKQLKTN 134

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + KMAL PCH  FQFYV         G+LSCQLYQRS D+FLG+P
Sbjct: 135 PDSRRIIVSAWNVADLPKMALMPCHAFFQFYVAPGDSPSARGRLSCQLYQRSADIFLGVP 194

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT MLA     + G+F+ T GD H+Y+NH EQ +LQLSR+PR  P + I   
Sbjct: 195 FNIASYALLTHMLAQQCDLEVGDFVWTGGDCHIYSNHREQVELQLSRAPRPYPTLQIKRR 254

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  + YEDF +  Y+PH AI A V+V
Sbjct: 255 PPSIFDYAYEDFEIIGYDPHPAIKAPVAV 283


>gi|15838923|ref|NP_299611.1| thymidylate synthase [Xylella fastidiosa 9a5c]
 gi|22096234|sp|Q9PB13|TYSY_XYLFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|9107503|gb|AAF85131.1|AE004044_2 thymidylate synthase [Xylella fastidiosa 9a5c]
          Length = 264

 Score =  388 bits (996), Expect = e-106,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N++YL +H V IWDEWAD  GELGP+YG QWR W   DG+ IDQI  +++ ++
Sbjct: 61  WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLLEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA V G   G+F+HTLGD HLY NH EQA +QL R PR  P +++NP + DL 
Sbjct: 181 YALLTHMLAQVTGLAVGDFVHTLGDAHLYANHVEQASVQLERVPRPQPVLMLNPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y+D  +  Y+P+ AI A V+V
Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264


>gi|54295693|ref|YP_128108.1| thymidylate synthase [Legionella pneumophila str. Lens]
 gi|62901230|sp|Q5WSU5|TYSY_LEGPL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|53755525|emb|CAH17024.1| Thymidylate synthase [Legionella pneumophila str. Lens]
          Length = 264

 Score =  388 bits (996), Expect = e-106,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL
Sbjct: 1   MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAKGFPLVTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQ+S +VQ ++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGGTIDQLSDVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A        EFI T GD HLY NH EQA  QL+R P  LP + I      L 
Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQTQLTREPLPLPSLAIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +Y+ H AI A ++V
Sbjct: 241 DYAYEDFEFVNYQSHPAIKAPIAV 264


>gi|83310426|ref|YP_420690.1| thymidylate synthase [Magnetospirillum magneticum AMB-1]
 gi|82945267|dbj|BAE50131.1| Thymidylate synthase [Magnetospirillum magneticum AMB-1]
          Length = 275

 Score =  387 bits (995), Expect = e-106,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           +HQYLDLLR +   G  + DRTG GT S FG+QMRFDLS+GFPL+TTKK+H +S+  ELL
Sbjct: 12  LHQYLDLLRRIQAEGVTKTDRTGTGTTSVFGHQMRFDLSRGFPLVTTKKLHTRSIFVELL 71

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L  + VSIWDEWAD +G+LGP+YG QWRSW   DG+ +DQI+ +V+ +R
Sbjct: 72  WFLRGDTNIGWLKDNKVSIWDEWADANGDLGPVYGKQWRSWACPDGSTVDQITQVVEMIR 131

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A I+ MALPPCHCLFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 132 KSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 191

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G + G F+HT GD HLY+NH EQA LQLSR+P  LP++ +NP + DL 
Sbjct: 192 YALLTHMVAQVTGLEVGAFVHTFGDAHLYSNHMEQAALQLSRAPLPLPRLELNPEVKDLF 251

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D  +  Y+ HA I A V+V
Sbjct: 252 AFTMDDIKVVDYQCHAHIAAPVAV 275


>gi|196249495|ref|ZP_03148192.1| Thymidylate synthase [Geobacillus sp. G11MC16]
 gi|196210789|gb|EDY05551.1| Thymidylate synthase [Geobacillus sp. G11MC16]
          Length = 264

 Score =  387 bits (995), Expect = e-106,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR +++ G +R DRTG GT S FG Q+RFDL KGFPLLTTKK+H +S+++ELL
Sbjct: 1   MKQYLDLLRDILENGIEREDRTGTGTISVFGRQLRFDLQKGFPLLTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L+ +GV+IWDEWAD++G+LG IYG QWR+W   D   IDQI+ +V+ ++
Sbjct: 61  WFLRGDTNIRFLNENGVTIWDEWADENGDLGRIYGAQWRAWRTSDSGTIDQITRVVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  +D+MALPPCH  FQFYV NG+LSC   QRS D FLG+PFNIAS
Sbjct: 121 HNPNSRRLLVSAWNVGELDQMALPPCHYAFQFYVANGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GE I + GDVHLY NH EQA LQL+  PR LP++II      + 
Sbjct: 181 YALLTHMVAQQCDLEVGELIFSGGDVHLYKNHVEQAKLQLTHEPRPLPKLIIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF    Y+PH AI A +SV
Sbjct: 241 DYRYEDFEFVGYDPHPAIKAPISV 264


>gi|289663561|ref|ZP_06485142.1| thymidylate synthase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289670949|ref|ZP_06492024.1| thymidylate synthase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 264

 Score =  387 bits (995), Expect = e-106,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLQGDTNIGYLSNNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NH +QA  QL+R+PR LP + +NP++ DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHVDQAREQLTRTPRALPTLRLNPDVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|307544291|ref|YP_003896770.1| thymidylate synthase [Halomonas elongata DSM 2581]
 gi|307216315|emb|CBV41585.1| thymidylate synthase [Halomonas elongata DSM 2581]
          Length = 284

 Score =  387 bits (995), Expect = e-106,   Method: Composition-based stats.
 Identities = 165/263 (62%), Positives = 215/263 (81%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL+R V++ G +R DRTGVGTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELLW
Sbjct: 22  QPYLDLMRTVLEHGVERDDRTGVGTRSLFGHQMRFDLSRGFPLITTKKLHLRSIIHELLW 81

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL GD+N++YL  +GV IWDEWAD++G+LGP+YG QWRSWPD  G  +DQI+ +++ LR 
Sbjct: 82  FLAGDTNIAYLKENGVRIWDEWADENGDLGPVYGYQWRSWPDPRGGHVDQIAGLLEQLRR 141

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR IVSAWN AL+D+MALPPCHCLFQFYV  G+LSCQLYQRS D+FLG+PFNIASY
Sbjct: 142 NPQSRRLIVSAWNPALVDEMALPPCHCLFQFYVAEGRLSCQLYQRSADIFLGVPFNIASY 201

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A V G + G+F+HT GD HLY NH EQA+LQL+R+PR  P++ ++P++ DL +
Sbjct: 202 ALLTRMIAQVAGLEPGDFVHTFGDAHLYLNHLEQAELQLTRTPRPAPRLTLDPSVDDLFA 261

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           FR+E   +  Y+PH  I A+V+V
Sbjct: 262 FRFEHIAIEDYDPHPHIKAEVAV 284


>gi|325286854|ref|YP_004262644.1| Thymidylate synthase [Cellulophaga lytica DSM 7489]
 gi|324322308|gb|ADY29773.1| Thymidylate synthase [Cellulophaga lytica DSM 7489]
          Length = 274

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/277 (58%), Positives = 212/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+HV + G+ + DRTG GT S FGYQMRFDLSKGFP++TTKK+H KS++HELL
Sbjct: 1   MKQYHDLLKHVQETGNQKGDRTGTGTISVFGYQMRFDLSKGFPMVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV IW+EWAD++G+LGP+YG QWR+W   D   IDQI  ++++L+
Sbjct: 61  WFLKGDTNIAYLQENGVRIWNEWADENGDLGPVYGHQWRNWNSED---IDQIKEVIETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +V+AWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLVTAWNPSVLPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ G+FIHT GD H+YNNH EQ +LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGDFIHTFGDAHIYNNHLEQVELQLSREPRAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+MIINP++ ++  F ++DFTL  Y+PH  I  KV++
Sbjct: 238 PKMIINPDVKNIFDFTFDDFTLEGYDPHPHIKGKVAI 274


>gi|319408804|emb|CBI82461.1| Thymidylate synthase [Bartonella schoenbuchensis R1]
          Length = 264

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 182/264 (68%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRF+L  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKVYLDLLSHVLSNGVDRSDRTGVGTRSIFGYQMRFNLQAGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+++L  HGVSIWDEWADKDG LGPIYG QWRSWP  DG  IDQIS+++ ++ 
Sbjct: 61  WFLRGDTNIAWLKEHGVSIWDEWADKDGNLGPIYGFQWRSWPAPDGRYIDQISNLLDTIN 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN ALI+ MALPPCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNPALIEDMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY NHFEQA  QLSR+P  LP M INP + DL 
Sbjct: 181 YALLTMMIAQVTGLKVGDFIHTLGDAHLYVNHFEQAKQQLSRTPGVLPVMFINPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +YE    I A V+V
Sbjct: 241 SFKFEDFNLLNYEAQPHIKAPVAV 264


>gi|108764037|ref|YP_634079.1| thymidylate synthase [Myxococcus xanthus DK 1622]
 gi|108467917|gb|ABF93102.1| thymidylate synthase [Myxococcus xanthus DK 1622]
          Length = 267

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL HV+  G  + DRTG GT S FG Q+RFDL++GFPLLTTKKVH KS++HELL
Sbjct: 4   MQPYLSLLDHVLHHGVKKGDRTGTGTLSVFGPQLRFDLTQGFPLLTTKKVHTKSILHELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L GD+NV  L   GV+IWDEWA+ DG LGP+YG QWRSW   +G  IDQ+ ++V+ L+
Sbjct: 64  WMLAGDTNVHTLQAQGVTIWDEWANADGSLGPVYGHQWRSWTAPNGEHIDQMKALVEGLK 123

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHI+SAWNVA +  M LPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 124 KNPDSRRHIISAWNVADLPSMKLPPCHVLFQFYVANGRLSCQLYQRSADLFLGLPFNIAS 183

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLTMM+A V G Q  EFIHT+GD HLY NH EQA  QLSR PR LP++ INP + DL 
Sbjct: 184 YSLLTMMVAQVTGLQAHEFIHTVGDAHLYLNHVEQAKTQLSREPRPLPRIHINPEVTDLF 243

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+YEDFTL  Y+PH AI A V+V
Sbjct: 244 AFKYEDFTLEGYDPHPAIKAPVAV 267


>gi|301166943|emb|CBW26522.1| putative thymidylate synthase [Bacteriovorax marinus SJ]
          Length = 257

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 160/257 (62%), Positives = 203/257 (78%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           ++HV+  G ++ DRTG GT S FGYQ R+DLS+GFPL+TTKK H +S++HELLWFL+GD+
Sbjct: 1   MKHVLDNGVEKSDRTGTGTISCFGYQARYDLSEGFPLVTTKKCHLRSIIHELLWFLKGDT 60

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N++YL  + V+IWDEWAD+DG LGP+YG QWR W   DG+ +DQIS++V+ ++ +P SRR
Sbjct: 61  NINYLKENKVTIWDEWADEDGNLGPVYGAQWRKWQRPDGSHVDQISNLVEQIKNNPDSRR 120

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            IVSAWN  +ID+MALPPCH  FQF+V N KLSCQLYQRS D+FLG+PFNIASY+LLTMM
Sbjct: 121 LIVSAWNPGVIDQMALPPCHAFFQFFVANDKLSCQLYQRSADIFLGVPFNIASYALLTMM 180

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A V G + GEFIHTLGD HLY+NH +QA LQLSR PR LPQM INP + ++  F + DF
Sbjct: 181 MAQVTGLEAGEFIHTLGDAHLYSNHLDQAKLQLSRDPRPLPQMKINPEVKNIFEFNFSDF 240

Query: 248 TLRSYEPHAAILAKVSV 264
            L  Y+PH  I A V+V
Sbjct: 241 ELVGYDPHPHIKAPVAV 257


>gi|332140100|ref|YP_004425838.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype']
 gi|332143102|ref|YP_004428840.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550122|gb|AEA96840.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327553124|gb|AEA99842.1| thymidylate synthase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 277

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 163/277 (58%), Positives = 205/277 (74%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL L+RHV   G  ++DRTG GT S FGYQMRF+L +GFPL+TTKK H KS++HELL
Sbjct: 1   MKEYLALMRHVRDTGVKKKDRTGTGTLSVFGYQMRFNLQEGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  HGV IWDEWA  +GELGP+YG QWRSW   DG  +DQI+ +V+ ++
Sbjct: 61  WFLKGETNIAYLKEHGVKIWDEWATDEGELGPVYGHQWRSWDRGDGTSVDQIAEVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVS WN A++              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 121 NNPDSRRLIVSGWNPAVLPDTNYSPKENAAMGKQALPPCHTLFQFYVLDGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GD+FLGIPFNIASY+LLTMM+A V   + G+FIHTLGD HLY+NH EQ +LQLSR P   
Sbjct: 181 GDIFLGIPFNIASYALLTMMIAQVCDLEPGDFIHTLGDAHLYSNHLEQVELQLSREPFER 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP + D+  F ++DFTL++Y+ H  I A V++
Sbjct: 241 PTMEINPEVKDIFGFTFDDFTLKNYQSHPHIKAPVAI 277


>gi|295135495|ref|YP_003586171.1| thymidylate synthase [Zunongwangia profunda SM-A87]
 gi|294983510|gb|ADF53975.1| thymidylate synthase [Zunongwangia profunda SM-A87]
          Length = 274

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/277 (58%), Positives = 211/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL++++  G+++ DRTG GT+S FGYQMRF+LS+GFP++TTKKVH KS+++ELL
Sbjct: 1   MKQYHDLLQYILDHGAEKGDRTGTGTKSVFGYQMRFNLSEGFPMVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD+ G+LGP+YG QWR+W   +   IDQIS I+++L+
Sbjct: 61  WFLKGDTNIKYLQENGVRIWNEWADEHGDLGPVYGHQWRNW---NSEEIDQISEIIETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 TNPNSRRMLVSAWNPSVMPDTAVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+L TMM+A V G++ G+FIHT GDVH+Y+NH EQ  LQLSR+PR L
Sbjct: 178 ADVFLGVPFNIASYALFTMMMAQVCGYEPGDFIHTFGDVHIYSNHMEQVKLQLSRTPRAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP I ++  F +EDF L  Y+PH AI  KV+V
Sbjct: 238 PIMKMNPEITNIFDFSFEDFKLEGYDPHPAIKGKVAV 274


>gi|58583375|ref|YP_202391.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84625200|ref|YP_452572.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|166710720|ref|ZP_02241927.1| thymidylate synthase [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|188575368|ref|YP_001912297.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|62901157|sp|Q5GWB5|TYSY_XANOR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123752707|sp|Q2NZH9|TYSY_XANOM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|58427969|gb|AAW77006.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84369140|dbj|BAE70298.1| Thymidylate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188519820|gb|ACD57765.1| thymidylate synthase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 264

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLQGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHF+QA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFDQARKQLTRTPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|114798205|ref|YP_759189.1| thymidylate synthase [Hyphomonas neptunium ATCC 15444]
 gi|122942752|sp|Q0C504|TYSY_HYPNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|114738379|gb|ABI76504.1| thymidylate synthase [Hyphomonas neptunium ATCC 15444]
          Length = 264

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  LLR +++ G  R DRTGVGT   FG QMRFDLS+GFP++TTK++H +S++ ELL
Sbjct: 1   MQQYQALLRDILENGHKRGDRTGVGTIGVFGRQMRFDLSEGFPMVTTKRLHLRSIIVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  +GVSIWDEWAD++G+LGP+YG QWRSW   +G  IDQI  ++  +R
Sbjct: 61  WFLRGDTNIAYLKENGVSIWDEWADENGDLGPVYGKQWRSWATPNGEAIDQIQWVLNEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++ MALPPCHCLFQF V +GKL+CQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNPADVNDMALPPCHCLFQFNVMDGKLNCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G Q GEF+HT GD HLY NH EQA+LQL+R PR LP + +NP+  DL 
Sbjct: 181 YALLTMMMARATGLQPGEFVHTFGDAHLYLNHLEQAELQLTREPRDLPTIHMNPDKADLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF +  Y PH  I A V+V
Sbjct: 241 GWEYEDFRVDGYAPHPHIKAPVAV 264


>gi|325964203|ref|YP_004242109.1| thymidylate synthase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470290|gb|ADX73975.1| thymidylate synthase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 267

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/261 (58%), Positives = 192/261 (73%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GT S FG QMRFDLSK FPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YEDLLRDVLASGTHKSDRTGTGTTSVFGRQMRFDLSKSFPLITTKRVHFKSVAVELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV ++   GV+IW+EWAD DG+LGP+YGVQWRSWP  DG  IDQI+ ++ SL+++P
Sbjct: 67  RGETNVKWMQDQGVTIWNEWADADGDLGPVYGVQWRSWPTPDGGHIDQIAELMDSLKSNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRH+VSAWNV+ +  MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRHVVSAWNVSELRDMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A  +G + GEF+ T GDVH+Y NH +Q   QL R P   PQ+ I      +  + 
Sbjct: 187 LTCMVAQQVGLEPGEFVWTGGDVHIYENHMDQVLKQLEREPYEYPQLKILRKPASIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            EDF +  Y  H  I A ++V
Sbjct: 247 LEDFEVVGYRHHPTIKAPIAV 267


>gi|189502717|ref|YP_001958434.1| hypothetical protein Aasi_1410 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498158|gb|ACE06705.1| hypothetical protein Aasi_1410 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 264

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL HV+  G +++DRTG GT+S FGYQMRF+L++GFPL+TTKK+H KS+++ELL
Sbjct: 1   MKQYLSLLGHVLHNGQEKKDRTGTGTKSIFGYQMRFNLAEGFPLMTTKKLHMKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL+++GV+IWDEWAD  G LGPIYG QWRSWP  +   +DQI  +++ ++
Sbjct: 61  WFLQGNTNIGYLNQNGVTIWDEWADAQGNLGPIYGYQWRSWPTSNHGKVDQIEQVIKQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A+P SRR +VSAWNV  +DKMALPPCH LFQFYV N KLSCQLYQRS D+FLGIPFNIAS
Sbjct: 121 ANPDSRRLLVSAWNVGELDKMALPPCHVLFQFYVANNKLSCQLYQRSADIFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + GEFIHTLGD HLYNNH EQA LQLSR+PR LP + +N  + D+ 
Sbjct: 181 YALLTTMVAQVCDLEVGEFIHTLGDAHLYNNHIEQAQLQLSRAPRPLPTLKVNSAVKDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F+Y+DF + +Y P+ +I A ++V
Sbjct: 241 AFQYDDFCIENYNPYPSIKAPIAV 264


>gi|121602325|ref|YP_989208.1| thymidylate synthase [Bartonella bacilliformis KC583]
 gi|166231691|sp|A1UTA5|TYSY_BARBK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120614502|gb|ABM45103.1| thymidylate synthase [Bartonella bacilliformis KC583]
          Length = 264

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 179/264 (67%), Positives = 215/264 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G+DR DRTGVGTRS FGYQMRF+L +GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKAYLDLLSHVLNNGTDRSDRTGVGTRSVFGYQMRFNLQEGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADKDG LGP+YG QWRSWP  DG  IDQIS+++  + 
Sbjct: 61  WFLKGDTNIAWLKEHGVSIWDEWADKDGNLGPVYGYQWRSWPSSDGRYIDQISNLLAMIN 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV+AWN ALID+MALPPCHCLFQF V NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPNSRRLIVTAWNPALIDEMALPPCHCLFQFQVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA  QLSR+P  LP + INP + DL 
Sbjct: 181 YALLTMMIAQVTGLKVGDFIHTLGDAHLYSNHFEQAKQQLSRTPGILPLIRINPKVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +YE    I A V+V
Sbjct: 241 SFQFEDFELLNYEAQPHIKAPVAV 264


>gi|124003691|ref|ZP_01688539.1| thymidylate synthase [Microscilla marina ATCC 23134]
 gi|123990746|gb|EAY30213.1| thymidylate synthase [Microscilla marina ATCC 23134]
          Length = 264

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 193/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV++ G  + DRTG GT S FGYQMRF+L+ GFPL+TTKK+H +SV+HELL
Sbjct: 1   MQQYTDLVQHVLENGVRKGDRTGTGTLSVFGYQMRFNLADGFPLVTTKKIHLRSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD DG LG +YG QWRSW    G  +DQI++++  ++
Sbjct: 61  WFLKGDTNIRYLQDNGVTIWDEWADDDGNLGSVYGAQWRSWQTATGETVDQITNLINQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  IDKMALPPCH +FQFYV  GKLSCQLYQRS D+ LGIPFNIAS
Sbjct: 121 RNPNSRRLMVSAWNVGEIDKMALPPCHTMFQFYVAEGKLSCQLYQRSADIGLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHT GD H+Y NH +    Q+ R P  LP++ +N  + DL 
Sbjct: 181 YALLLEMVAQVTGLKAGEFIHTFGDAHIYANHEKALREQIQRKPYALPRLELNSEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YED  +  Y+ H  I   V+V
Sbjct: 241 KFTYEDIKVVDYQYHPMIKLPVAV 264


>gi|264679393|ref|YP_003279300.1| thymidylate synthase [Comamonas testosteroni CNB-2]
 gi|262209906|gb|ACY34004.1| thymidylate synthase [Comamonas testosteroni CNB-2]
          Length = 294

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY   +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF
Sbjct: 32  QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           LRGDSNV +L   G +IWDEWADK  G+LGP+YGVQWRSWP  DG  +DQI+ +V+ L++
Sbjct: 92  LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLKS 151

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR IVSAWNVA +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY
Sbjct: 152 NPDSRRVIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 211

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA   G + G+FI T GD H+YNNHFEQ   QLSR P   P + I      +  
Sbjct: 212 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPASIFD 271

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + YEDF +  Y+ HA I A V+V
Sbjct: 272 YEYEDFEVLDYQHHAGIKAPVAV 294


>gi|319405984|emb|CBI79616.1| Thymidylate synthase [Bartonella sp. AR 15-3]
          Length = 264

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 212/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRF+L  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKAYLDLLFHVLNNGIDRLDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADK G+LGPIYG QWRSWP  DG  IDQI +++  ++
Sbjct: 61  WFLKGDTNIAWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTPDGRNIDQIKNLLAMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A I++MALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QNPDSRRLIVSAWNPAAIEEMALPPCHCLFQFYVAAGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A +   Q G+FIHTLGD HLY NHFEQA+ QLSR+P+ LP M+INP + +L 
Sbjct: 181 YALLTMMIAQITHLQVGDFIHTLGDAHLYLNHFEQAEQQLSRTPKALPSMLINPEVKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF ++DF L +YE    I A V+V
Sbjct: 241 SFTFKDFELLNYEAFPHIKAPVAV 264


>gi|307565583|ref|ZP_07628063.1| thymidylate synthase [Prevotella amnii CRIS 21A-A]
 gi|307345742|gb|EFN91099.1| thymidylate synthase [Prevotella amnii CRIS 21A-A]
          Length = 264

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+ ++K G  R DRTGVGT S FG+QM F++  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYQDLLKRILKEGVKREDRTGVGTLSIFGHQMHFNMEDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LGP+YG QWRSWPDY G  IDQI +++  ++
Sbjct: 61  WFLKGDTNVKYLQEHGVKIWNEWADENGDLGPVYGHQWRSWPDYKGGSIDQIKNVLDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +V+AWN A +D+MALPPCHCLFQFYV  GKLS QLYQRS D FLG+PFNIAS
Sbjct: 121 HSPSSRRMLVTAWNPAEVDEMALPPCHCLFQFYVAEGKLSLQLYQRSADTFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLL  M+A V G + GEFIHT GD H+Y NH EQ  LQL+R+PR LP++IINP++ DL 
Sbjct: 181 YSLLLHMMAQVTGLKVGEFIHTTGDTHIYLNHLEQVKLQLTRTPRPLPKIIINPDVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF Y+DF +  Y P+  I   V+V
Sbjct: 241 SFHYDDFKIEDYNPYPHIPGTVAV 264


>gi|30248582|ref|NP_840652.1| thymidylate synthase [Nitrosomonas europaea ATCC 19718]
 gi|62901360|sp|Q82WU3|TYSY_NITEU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|30180177|emb|CAD84479.1| Thymidylate synthase [Nitrosomonas europaea ATCC 19718]
          Length = 264

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+QYLDL+RHV+++G  + DRTG GT S FGYQMRFDL  GFPL+TTKK H KS++HELL
Sbjct: 1   MYQYLDLMRHVLQYGHKKSDRTGTGTLSVFGYQMRFDLQTGFPLVTTKKCHVKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ YL R+GVSIWDEWAD++G+LGPIYG QWRSW   DG VIDQIS ++Q ++
Sbjct: 61  WFLRGETNIDYLKRNGVSIWDEWADENGDLGPIYGHQWRSWAASDGTVIDQISQVIQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  +DKM L PCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ETPDSRRMIVSAWNVGDLDKMKLAPCHVLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT+M+A     Q GEF+HT GD HLY NH EQA LQL R PR LP M +N  + ++ 
Sbjct: 181 YSLLTLMIAQCCDLQPGEFVHTFGDAHLYLNHLEQARLQLEREPRALPAMQLNSTVRNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YEDFTL  Y+P+  I A V+V
Sbjct: 241 DFGYEDFTLHDYDPYPPIKAPVAV 264


>gi|294626073|ref|ZP_06704681.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292599609|gb|EFF43738.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 264

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  +R
Sbjct: 61  WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWSGPDGVEIDQMQWLVDEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRAPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|115372682|ref|ZP_01459989.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|310823834|ref|YP_003956192.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|115370403|gb|EAU69331.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|309396906|gb|ADO74365.1| Thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 264

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 175/264 (66%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+K G+ R DRTG GT S FG Q+RFDL++GFPLLTTKK+H KS++HELL
Sbjct: 1   MKQYLDLLDRVLKDGTKRGDRTGTGTLSLFGPQLRFDLTQGFPLLTTKKLHLKSILHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W LRGD++V  L   GV+IWDEWAD  G LGP+YG QWRSW    G  IDQ+  +V+SLR
Sbjct: 61  WMLRGDTSVRSLQAQGVTIWDEWADAQGNLGPVYGHQWRSWSGPQGQSIDQMRQVVESLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA +  M LPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPESRRHIVSAWNVADLPAMKLPPCHILFQFYVANGRLSCQLYQRSADLFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G    EFIHTLGD HLY NH EQA  QL+R PR LP+M +NP + DL 
Sbjct: 181 YALLTMMVAQATGLTAHEFIHTLGDAHLYLNHVEQARTQLAREPRPLPRMQLNPEVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FRYEDFTL+ YEPH AI A V+V
Sbjct: 241 AFRYEDFTLQEYEPHPAIKAPVAV 264


>gi|86131361|ref|ZP_01049959.1| Thymidylate synthase [Dokdonia donghaensis MED134]
 gi|85817806|gb|EAQ38974.1| Thymidylate synthase [Dokdonia donghaensis MED134]
          Length = 274

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 160/277 (57%), Positives = 210/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV+  G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLMKHVLAEGNFKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GV IW+EWAD++G+LGP+YG QWR+W   +G+ IDQI  IV++L+
Sbjct: 61  WFLQGDTNVKYLQENGVRIWNEWADENGDLGPVYGYQWRNW---NGDEIDQIKDIVETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 KNPNSRRMLVSAWNPSVMPDTSVSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR  RTL
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQVELQLSREIRTL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + INP + D+  F ++DFTL +Y PH  I   V+V
Sbjct: 238 PTLKINPEVKDIFGFTFDDFTLENYNPHPHIKGAVAV 274


>gi|163793369|ref|ZP_02187344.1| thymidylate synthase [alpha proteobacterium BAL199]
 gi|159181171|gb|EDP65686.1| thymidylate synthase [alpha proteobacterium BAL199]
          Length = 264

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 168/264 (63%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HV+  G+ + DRTG GTRS FG+QMRFDLSKGFP++TTKK+H KS+VHELL
Sbjct: 1   MRQYLDLMTHVLTDGALKGDRTGTGTRSVFGHQMRFDLSKGFPMVTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL   GV IW+EWA  DG+LGP+YG QWRSW   DG+ +DQIS ++  LR
Sbjct: 61  WFLAGDTNVRYLQERGVRIWNEWARPDGDLGPVYGKQWRSWGSPDGSTVDQISVLLDQLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NNPNSRRLIVSAWNVGELDDMALAPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G   GEF+HT GD HLY NH EQA  QL R P  LP++ +NPN+ DL 
Sbjct: 181 YALLTHMIAHVTGLGVGEFVHTFGDAHLYLNHLEQARRQLQREPLPLPRLWLNPNVKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F +ED  +  YE H  I A V+V
Sbjct: 241 EFTFEDVRIDGYEAHPHIAAPVAV 264


>gi|294665699|ref|ZP_06730974.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292604541|gb|EFF47917.1| thymidylate synthase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 347

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 159/263 (60%), Positives = 206/263 (78%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELLW
Sbjct: 85  KPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELLW 144

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++ 
Sbjct: 145 FLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIKR 204

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIASY
Sbjct: 205 NPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIASY 264

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL +
Sbjct: 265 ALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRAPRALPTLRLNPEVTDLFA 324

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           FR+ED  +  Y+PH AI A V+V
Sbjct: 325 FRFEDIAIEGYDPHPAIKAPVAV 347


>gi|126662422|ref|ZP_01733421.1| thymidylate synthetase [Flavobacteria bacterium BAL38]
 gi|126625801|gb|EAZ96490.1| thymidylate synthetase [Flavobacteria bacterium BAL38]
          Length = 274

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 158/277 (57%), Positives = 205/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV++ G+ + DRTG GT S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLVKHVLENGNQKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IWDEWAD++G LGP+YG QWR+W   +   IDQI+ ++++L+
Sbjct: 61  WFLNGDTNIKYLQENGVKIWDEWADENGNLGPVYGHQWRNW---NSEEIDQITELIETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 TNPNSRRMLVSAWNPSVLPDTSVSFAENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V   Q G+FIHT GD H+YNNH EQ +LQLSR  R L
Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCDLQVGDFIHTFGDAHIYNNHMEQVELQLSRDCRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP I ++  F++EDFTL  Y+PH  I   V+V
Sbjct: 238 PTMKLNPEIKNIFDFKFEDFTLEGYDPHPHIKGIVAV 274


>gi|21241612|ref|NP_641194.1| thymidylate synthase [Xanthomonas axonopodis pv. citri str. 306]
 gi|25091469|sp|Q8PP46|TYSY_XANAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|21106971|gb|AAM35730.1| thymidylate synthase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 264

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+HV+  G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLELLQHVLDHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  H V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLSDHQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPSLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|332291421|ref|YP_004430030.1| thymidylate synthase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169507|gb|AEE18762.1| thymidylate synthase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 274

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 160/277 (57%), Positives = 212/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+V+ELL
Sbjct: 1   MKQYHDLIKHVLENGNQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWR+W   +G+ IDQI  IV++L+
Sbjct: 61  WFLQGDTNIKYLQENGVRIWNEWADENGDLGPVYGYQWRNW---NGDEIDQIKDIVETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 TNPNSRRMLVSAWNPSVMPDTSASFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+Y+NH EQ +LQLSR  RTL
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYSNHMEQVELQLSREFRTL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + INP++ D+  F ++DFTL +Y PH  I   V++
Sbjct: 238 PTLKINPDVKDIFGFTFDDFTLENYNPHPHIKGAVAI 274


>gi|325917331|ref|ZP_08179549.1| thymidylate synthase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536465|gb|EGD08243.1| thymidylate synthase [Xanthomonas vesicatoria ATCC 35937]
          Length = 264

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLRHV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLDLLRHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLQGDTNIGYLKDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELSQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY NHF+QA +QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYANHFDQARVQLTRAPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIEGYDPHPAIKAPVAV 264


>gi|118594685|ref|ZP_01552032.1| thymidylate synthase [Methylophilales bacterium HTCC2181]
 gi|118440463|gb|EAV47090.1| thymidylate synthase [Methylophilales bacterium HTCC2181]
          Length = 264

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQYLDLLRHV   G+ ++DRTG GT S FGYQMRFDL++GFPLLTTKK+H KSV++ELL
Sbjct: 1   MHQYLDLLRHVKSNGTVKKDRTGTGTISVFGYQMRFDLNEGFPLLTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV +L  +G+SIWDEWAD  G LGP+YG QWRSW  ++G  IDQI  ++  ++
Sbjct: 61  WFLTGDTNVKFLKDNGISIWDEWADDKGNLGPVYGHQWRSWSSHNGESIDQIKILIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA ID+M LPPCH  FQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 VNPDSRRLIVSAWNVADIDQMKLPPCHAFFQFYVANGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + GEF+HTLGD H+Y NH EQ   QLSR P+TLP M +N +I ++ 
Sbjct: 181 YALLTMMIAQVCGLRLGEFVHTLGDAHIYLNHEEQVTQQLSREPKTLPIMTLNKSIDNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF+L  Y+P   I A V+V
Sbjct: 241 DFTFDDFSLEGYDPEPLIKAPVAV 264


>gi|7766860|pdb|1EV8|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia
           Coli
          Length = 264

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 150/263 (57%), Positives = 198/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL P H  FQFYV +GKLSCQLYQR  DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRCXDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|5542439|pdb|1QQQ|A Chain A, Crystal Structure Analysis Of Ser254 Mutant Of Escherichia
           Coli Thymidylate Synthase
          Length = 264

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 150/263 (57%), Positives = 198/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL P H  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRSXDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+ H  I A V++
Sbjct: 242 YRFEDFEIEGYDSHPGIKAPVAI 264


>gi|52843063|ref|YP_096862.1| thymidylate synthase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|62901244|sp|Q5ZRL3|TYSY_LEGPH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|52630174|gb|AAU28915.1| thymidylate synthase (TS) [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 264

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H+++ G ++ DRTG GT S FGYQMRFDL++GFPL+TTKK+H +S+VHELL
Sbjct: 1   MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAQGFPLVTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQ+S +VQ ++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGRTIDQLSEVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A        EFI T GD HLY NH EQA +QL+R P  LP + I      L 
Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLAIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +Y+ H AI A ++V
Sbjct: 241 DYAYEDFEFLNYQSHPAIKAPIAV 264


>gi|78046451|ref|YP_362626.1| thymidylate synthase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|123744059|sp|Q3BX87|TYSY_XANC5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|78034881|emb|CAJ22526.1| thymidylate synthase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 264

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR+ED  +  Y PH AI A V+V
Sbjct: 241 GFRFEDIAIEGYAPHPAIKAPVAV 264


>gi|226307948|ref|YP_002767908.1| thymidylate synthase [Rhodococcus erythropolis PR4]
 gi|229495127|ref|ZP_04388873.1| thymidylate synthase [Rhodococcus erythropolis SK121]
 gi|226187065|dbj|BAH35169.1| thymidylate synthase [Rhodococcus erythropolis PR4]
 gi|229318058|gb|EEN83933.1| thymidylate synthase [Rhodococcus erythropolis SK121]
          Length = 266

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 162/261 (62%), Positives = 199/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG+QMRFDL+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 7   YEDLLRLVMETGTAKSDRTGTGTRSIFGHQMRFDLADGFPLVTTKKVHLKSIVNELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV++LH HGVSIWDEWAD++GELGP+YGVQWRSWP   G  IDQI+  V++LR++P
Sbjct: 67  RGDSNVAWLHEHGVSIWDEWADENGELGPVYGVQWRSWPTPSGEHIDQITQTVETLRSNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNVA I +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVADIPQMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   GEF+ T GD H+Y+NH +Q   QL R P  LP + +N     +  + 
Sbjct: 187 LTHMMAQQAGLDVGEFVWTGGDCHIYDNHVDQVTEQLGREPLPLPTLKLN-KRDSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y+ H AI A V+V
Sbjct: 246 FEDVEIVDYQHHPAIKAPVAV 266


>gi|71276155|ref|ZP_00652435.1| Thymidylate synthase [Xylella fastidiosa Dixon]
 gi|71900364|ref|ZP_00682498.1| Thymidylate synthase [Xylella fastidiosa Ann-1]
 gi|170730616|ref|YP_001776049.1| thymidylate synthase [Xylella fastidiosa M12]
 gi|71163073|gb|EAO12795.1| Thymidylate synthase [Xylella fastidiosa Dixon]
 gi|71729867|gb|EAO31964.1| Thymidylate synthase [Xylella fastidiosa Ann-1]
 gi|167965409|gb|ACA12419.1| Thymidylate synthase [Xylella fastidiosa M12]
          Length = 264

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N++YL +H V IWDEWAD  GELGP+YG QWR W   DG+ IDQI  +V+ ++
Sbjct: 61  WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA V G   G+F+HTLGD HLY NH EQA +QL R PR  P + +N  + DL 
Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y+D  +  Y+P+ AI A V+V
Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264


>gi|307611741|emb|CBX01446.1| thymidylate synthase [Legionella pneumophila 130b]
          Length = 264

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 163/264 (61%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL
Sbjct: 1   MKTYLQLLEHILQHGVEKSDRTGTGTLSVFGYQMRFDLAKGFPLVTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQ+S +VQ ++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGRTIDQLSDVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +D+MAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGELDQMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A        EFI T GD HLY NH EQA  QL+R P  LP + I      L 
Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQTQLTREPLPLPSLAIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +Y+ H AI A ++V
Sbjct: 241 EYVYEDFEFVNYQSHPAIKAPIAV 264


>gi|28199248|ref|NP_779562.1| thymidylate synthase [Xylella fastidiosa Temecula1]
 gi|182681974|ref|YP_001830134.1| thymidylate synthase [Xylella fastidiosa M23]
 gi|32130273|sp|Q87BT4|TYSY_XYLFT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|28057354|gb|AAO29211.1| thymidylate synthase [Xylella fastidiosa Temecula1]
 gi|182632084|gb|ACB92860.1| Thymidylate synthase [Xylella fastidiosa M23]
 gi|307578239|gb|ADN62208.1| thymidylate synthase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 264

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLELLNDVLVHGIKKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N++YL +H V IWDEWAD  GELGP+YG QWR W   DG+ IDQI  +V+ ++
Sbjct: 61  WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA V G   G+F+HTLGD HLY NH EQA +QL R PR  P + +N  + DL 
Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y+D  +  Y+P+ AI A V+V
Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264


>gi|225011474|ref|ZP_03701912.1| Thymidylate synthase [Flavobacteria bacterium MS024-2A]
 gi|225003977|gb|EEG41949.1| Thymidylate synthase [Flavobacteria bacterium MS024-2A]
          Length = 274

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 160/277 (57%), Positives = 211/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HV+  GS++ DRTG GT+S FGYQMRFDLSKGFPL+TTKK+H+KS+VHELL
Sbjct: 1   MKQYLDLVNHVLATGSEKTDRTGTGTKSVFGYQMRFDLSKGFPLVTTKKIHFKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD+ G LGP+YG QWR+W   +   IDQI  ++ +L+
Sbjct: 61  WFLKGDTNIEYLQENGVRIWNEWADEKGNLGPVYGHQWRNW---NSEGIDQIQEVINTLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 TNPDSRRMLVSAWNPSVLPDTKVSFSKNVANNKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLT+M+A V G++ G+F+H+ GDVH+Y+NHFEQ   QLSR+P+ L
Sbjct: 178 ADVFLGVPFNIASYALLTLMVAQVCGYEPGDFVHSFGDVHIYSNHFEQLKEQLSRAPKAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP I ++  F Y+DF L +Y+P+  I  KV++
Sbjct: 238 PEMHLNPEIKNIFDFTYDDFELINYDPYPLIKGKVAI 274


>gi|71898344|ref|ZP_00680517.1| Thymidylate synthase [Xylella fastidiosa Ann-1]
 gi|71731867|gb|EAO33925.1| Thymidylate synthase [Xylella fastidiosa Ann-1]
          Length = 264

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKK+H +S++HELL
Sbjct: 1   MKQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N++YL +H V IWDEWAD  GELGP+YG QWR W   DG+ IDQI  +V+ ++
Sbjct: 61  WFLRGETNIAYLKKHQVHIWDEWADATGELGPVYGKQWRRWAGADGHEIDQIRWLVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNVA + +MAL PCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA V G   G+F+HTLGD HLY NH EQA +QL R PR  P + +N  + DL 
Sbjct: 181 YALLTHMLAQVTGLVVGDFVHTLGDAHLYANHVEQASVQLGRVPRPQPVLRLNQAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F Y+D  +  Y+P+ AI A V+V
Sbjct: 241 DFTYDDIVIEGYDPYPAIKAPVAV 264


>gi|308799723|ref|XP_003074642.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 /
           DHFR-TS (ISS) [Ostreococcus tauri]
 gi|116000813|emb|CAL50493.1| bifunctional dihydrofolate reductase-thymidylate synthase 2 /
           DHFR-TS (ISS) [Ostreococcus tauri]
          Length = 751

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 133/283 (46%), Positives = 184/283 (65%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYLD++R +I  G+ + DRTG GT STFG QMRFDL + FPLLTTK+V W+ V  ELLW
Sbjct: 469 HQYLDMIREIIDQGAVKGDRTGTGTISTFGNQMRFDLRRSFPLLTTKRVFWRGVAEELLW 528

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G++N + L    ++IWD    ++            G+LGP+YG QWR +        
Sbjct: 529 FVAGETNANKLAEKKINIWDGNGSREYLDSIGLTEREVGDLGPVYGFQWRHFGAEYTNMH 588

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++ +P  RR +++AWN A + +MALPPCH   QFYV NG+LSC
Sbjct: 589 ADYTGKGVDQLAEVINKIKNNPTDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSC 648

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V   + G+F+H  GD H+Y+NH E    QL+
Sbjct: 649 QMYQRSCDMGLGVPFNIASYSLLTCMIAQVCDLKPGDFVHVCGDTHVYSNHVEPLKKQLT 708

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             PR  P + INP   D+ SF ++DF +  Y+PH  I  K++V
Sbjct: 709 CEPRPFPILKINPEKKDIDSFTFDDFEIIGYDPHPKIEMKMAV 751


>gi|319950119|ref|ZP_08024059.1| thymidylate synthase [Dietzia cinnamea P4]
 gi|319436222|gb|EFV91402.1| thymidylate synthase [Dietzia cinnamea P4]
          Length = 266

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 163/261 (62%), Positives = 204/261 (78%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL+ V++ G+ + DRTG GTRS FG+Q+R+DL++GFPL+TTK+VH+KSV +ELLWFL
Sbjct: 7   YEDLLQLVLEQGAPKADRTGTGTRSLFGHQLRYDLAQGFPLITTKRVHFKSVAYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +GV+IWDEWAD DGELGP+YGVQWRSWP  DG  IDQI++ V+ LRADP
Sbjct: 67  RGDSNVGWLRENGVTIWDEWADADGELGPVYGVQWRSWPTPDGAHIDQIAAAVELLRADP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ + +MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 127 DSRRNIVSAWNVSELSEMALPPCHLLFQFYVADGKLSCQLYQRSADLFLGVPFNIASYSL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A  +G + GEFI T GD H+Y+NH EQ   QLSR P   P++ +N     +  + 
Sbjct: 187 LTHMIAQQVGLEVGEFIWTGGDCHIYDNHVEQVRTQLSREPYPYPELRLNRAP-SIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +EDF +  YE H  I A V+V
Sbjct: 246 FEDFEVVGYEHHPGIKAPVAV 266


>gi|297528628|ref|YP_003669903.1| thymidylate synthase [Geobacillus sp. C56-T3]
 gi|297251880|gb|ADI25326.1| thymidylate synthase [Geobacillus sp. C56-T3]
          Length = 264

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR ++K G ++ DRTG GT S FG Q+RFDL KGFPLLTTKK+H +S+++ELL
Sbjct: 1   MKQYLDLLRDILKNGIEKEDRTGTGTISVFGRQLRFDLQKGFPLLTTKKLHIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L+ +GV+IWDEWAD++GELG IYG QWR+W   DG  IDQI+ +++ ++
Sbjct: 61  WFLRGDTNVRFLNENGVTIWDEWADENGELGRIYGAQWRAWRTADGGTIDQITRVIEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WN+  +D+MALPPCH  FQFYV  G+LSC   QRS D FLG+PFNIAS
Sbjct: 121 HNPNSRRLLVSSWNIGELDQMALPPCHYAFQFYVAAGRLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GE I + GDVHLY NH EQA LQL+R P  LP++II      + 
Sbjct: 181 YALLTHMVAQQCDLEVGELIFSGGDVHLYKNHVEQAKLQLTRDPCPLPKLIIKRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF    Y+PH AI A +SV
Sbjct: 241 GYCYEDFEFVGYDPHPAIKAPISV 264


>gi|163786432|ref|ZP_02180880.1| Thymidylate synthase [Flavobacteriales bacterium ALC-1]
 gi|159878292|gb|EDP72348.1| Thymidylate synthase [Flavobacteriales bacterium ALC-1]
          Length = 274

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 159/277 (57%), Positives = 206/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV+  G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLVKHVLAEGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N  YL  +GV IW+EWAD +G+LGP+YG QWR+W       IDQI  ++ +L+
Sbjct: 61  WFLKGDTNTKYLTENGVRIWNEWADDNGDLGPVYGHQWRNWAS---EEIDQIKEVITTLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L T M+A V GF+ G+FIHT GD H+YNNH EQ +LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALFTKMMAQVCGFEAGDFIHTFGDAHIYNNHMEQLELQLSRVPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+MI+NP + D+  F++EDFTL  Y PH  I   V+V
Sbjct: 238 PKMILNPEVKDIFDFKFEDFTLVDYNPHPHIKGVVAV 274


>gi|121593609|ref|YP_985505.1| thymidylate synthase [Acidovorax sp. JS42]
 gi|171769450|sp|A1W5A4|TYSY_ACISJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120605689|gb|ABM41429.1| thymidylate synthase [Acidovorax sp. JS42]
          Length = 277

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/270 (59%), Positives = 193/270 (71%), Gaps = 7/270 (2%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DL+RHV + G+ + DRTG GT+S FG+QMRFDLS+GFPL+TTKKVH KS++ ELLW
Sbjct: 8   HQYEDLMRHVFEHGTAKGDRTGTGTKSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGDSNV +L   G +IWDEWA  DG LGP+YGVQWRSWP  DG  IDQI  ++ +L+ 
Sbjct: 68  FLRGDSNVRWLQERGCTIWDEWARDDGSLGPVYGVQWRSWPTPDGGHIDQIQQVIDTLKT 127

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGI 174
            P SRR IVSAWNVA +D+MAL PCH  FQFYV         GKLSCQLYQRS D+FLG+
Sbjct: 128 HPDSRRIIVSAWNVAELDRMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGV 187

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT M+A     Q G+FI T GD H+Y+NHFEQ   QL+R P   P + I  
Sbjct: 188 PFNIASYALLTHMVAQQCDLQVGDFIWTGGDCHIYSNHFEQVRTQLARQPYAYPTLQIKR 247

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               +  + YEDF +  YE H AI A V+V
Sbjct: 248 RPASIFDYAYEDFEVVGYEHHPAIKAPVAV 277


>gi|170739398|ref|YP_001768053.1| thymidylate synthase [Methylobacterium sp. 4-46]
 gi|168193672|gb|ACA15619.1| Thymidylate synthase [Methylobacterium sp. 4-46]
          Length = 264

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 158/264 (59%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLR ++  G ++ DRTG GT S FG+QMRFDL++GFPL+TTK++H KS++HELL
Sbjct: 1   MRAYHDLLRRILDDGVEKHDRTGTGTLSVFGHQMRFDLAEGFPLVTTKRLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  +GV+IWDEWAD+ G+LGP+YG QWRSW   DG  +DQI+ ++  +R
Sbjct: 61  WFLAGDTNVAYLQSNGVTIWDEWADEHGDLGPVYGKQWRSWAKPDGGSLDQIAWVLDEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWN A +D+MAL PCHCLFQFYV  G+LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNPADLDRMALAPCHCLFQFYVAQGRLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V+    G+F+HTLGD HLY NH  QA  QL+R  R LPQ+ +NP +  L 
Sbjct: 181 YALLTAMMAQVLDLVPGDFVHTLGDAHLYVNHVAQARQQLARDHRPLPQLRLNPQVRSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FR++D  L  Y+PH AI A V+V
Sbjct: 241 DFRHDDVVLEGYDPHPAIRAPVAV 264


>gi|150024438|ref|YP_001295264.1| thymidylate synthase [Flavobacterium psychrophilum JIP02/86]
 gi|166231699|sp|A6GWH3|TYSY_FLAPJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|149770979|emb|CAL42446.1| Thymidylate synthase [Flavobacterium psychrophilum JIP02/86]
          Length = 274

 Score =  384 bits (987), Expect = e-105,   Method: Composition-based stats.
 Identities = 158/277 (57%), Positives = 212/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+++V+  G+ + DRTG GT+S FGYQMRF+L++GFP++TTKK+H KS++HELL
Sbjct: 1   MKQYLDLVKYVLNNGTQKGDRTGTGTKSVFGYQMRFNLAEGFPMVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL ++GV IWD+WAD++GELGP+YG QWR+W   +   IDQI+ ++++L+
Sbjct: 61  WFLKGETNIAYLQQNGVKIWDDWADENGELGPVYGHQWRNW---NNEEIDQITELIETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K+ALPPCH  FQFYV  GKLSCQLYQRS
Sbjct: 118 INPNSRRMLVSAWNPSVLPDTTKSFAENVANAKVALPPCHAFFQFYVSEGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V   Q GEFIHT GD H+YNNHFEQ  LQLSR P+ L
Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCDLQAGEFIHTFGDAHIYNNHFEQVALQLSREPKPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+MI+NP + ++  F++EDF L  YE HA I   V+V
Sbjct: 238 PKMILNPAVKNIFDFKFEDFKLEGYESHAHIKGAVAV 274


>gi|332765782|gb|EGJ95995.1| thymidylate synthase [Shigella flexneri 2930-71]
          Length = 257

 Score =  384 bits (987), Expect = e-105,   Method: Composition-based stats.
 Identities = 147/257 (57%), Positives = 195/257 (75%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           ++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLWFL+GD+
Sbjct: 1   MQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDT 60

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ DP SRR
Sbjct: 61  NIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRR 120

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LL  M
Sbjct: 121 IIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHM 180

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +R+EDF
Sbjct: 181 MAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDF 240

Query: 248 TLRSYEPHAAILAKVSV 264
            +  Y+PH  + A V++
Sbjct: 241 EIEGYDPHPGVKAPVAI 257


>gi|222110329|ref|YP_002552593.1| thymidylate synthase [Acidovorax ebreus TPSY]
 gi|221729773|gb|ACM32593.1| thymidylate synthase [Acidovorax ebreus TPSY]
          Length = 277

 Score =  384 bits (987), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/270 (59%), Positives = 193/270 (71%), Gaps = 7/270 (2%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DL+RHV + G+ + DRTG GTRS FG+QMRFDL++GFPL+TTKKVH KS++ ELLW
Sbjct: 8   HQYEDLMRHVFEHGTAKGDRTGTGTRSVFGHQMRFDLAEGFPLVTTKKVHLKSIILELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGDSNV +L   G +IWDEWA  DG LGP+YGVQWRSWP  DG  IDQI  ++ +L+ 
Sbjct: 68  FLRGDSNVRWLQERGCTIWDEWARDDGSLGPVYGVQWRSWPTPDGGHIDQIQQVIDTLKT 127

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGI 174
            P SRR IVSAWNVA +D+MAL PCH  FQFYV         GKLSCQLYQRS D+FLG+
Sbjct: 128 HPDSRRIIVSAWNVAELDQMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGV 187

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT M+A     Q G+FI T GD H+Y+NHFEQ   QL+R P   P + I  
Sbjct: 188 PFNIASYALLTHMVAQQCDLQVGDFIWTGGDCHIYSNHFEQVQTQLARQPYAYPTLQIMR 247

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               +  + YEDF +  YE H AI A V+V
Sbjct: 248 RPASIFDYAYEDFEVVGYEHHPAIKAPVAV 277


>gi|196231360|ref|ZP_03130219.1| Thymidylate synthase [Chthoniobacter flavus Ellin428]
 gi|196224696|gb|EDY19207.1| Thymidylate synthase [Chthoniobacter flavus Ellin428]
          Length = 264

 Score =  384 bits (987), Expect = e-105,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V+  G  + DRTG GT S FG Q RFDLS GFPLLTTKK+H KS++HELL
Sbjct: 1   MRAYLDLLTLVLDHGRFKPDRTGTGTYSVFGAQARFDLSSGFPLLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL ++GV+IW+EWAD+DG LG +YG QWR W   DG  IDQI +++  ++
Sbjct: 61  WFLAGDTNVRYLQQNGVTIWNEWADEDGNLGRVYGAQWRDWITADGRHIDQIDNVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   +D MALPPCH +FQF+V +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPGEVDTMALPPCHAMFQFFVLDGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G Q G+F+HT GD+HLY NH +QA  QL+R+PR LP M ++P I D+ 
Sbjct: 181 YALLTMMVAQVTGLQPGDFVHTFGDLHLYANHLDQAREQLTRTPRPLPTMTLSPAIRDIH 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+PH AI A ++V
Sbjct: 241 GFRYEDFVLSGYDPHPAIKAPIAV 264


>gi|285019528|ref|YP_003377239.1| thymidylate synthase [Xanthomonas albilineans GPE PC73]
 gi|283474746|emb|CBA17245.1| probable thymidylate synthase protein [Xanthomonas albilineans]
          Length = 264

 Score =  384 bits (987), Expect = e-105,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LLRHV+  G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S+VHELL
Sbjct: 1   MTPYLELLRHVLTHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  + VSIWDEWAD  GELGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGETNIAYLKDNKVSIWDEWADAQGELGPVYGKQWRRWAGADGREIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVVSAWNVAELPQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHF QA  QL+R+PR LP++ +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFAQAREQLARTPRPLPRLRLNPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F Y+D  +  Y+PH AI A V+V
Sbjct: 241 AFTYDDIAIEGYDPHPAIKAPVAV 264


>gi|299530475|ref|ZP_07043895.1| thymidylate synthase [Comamonas testosteroni S44]
 gi|298721451|gb|EFI62388.1| thymidylate synthase [Comamonas testosteroni S44]
          Length = 282

 Score =  384 bits (987), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY   +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF
Sbjct: 20  QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 79

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           LRGDSNV +L   G +IWDEWADK  G+LGP+YGVQWRSWP  DG  +DQI+ +V+ L++
Sbjct: 80  LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLKS 139

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR IVSAWNVA +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY
Sbjct: 140 NPDSRRIIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 199

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA   G + G+FI T GD H+YNNHFEQ   QLSR P   P + I      +  
Sbjct: 200 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPASIFD 259

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + YEDF +  Y+ HA I A V+V
Sbjct: 260 YEYEDFEVLDYQHHAGIKAPVAV 282


>gi|304321193|ref|YP_003854836.1| thymidylate synthase [Parvularcula bermudensis HTCC2503]
 gi|303300095|gb|ADM09694.1| thymidylate synthase [Parvularcula bermudensis HTCC2503]
          Length = 264

 Score =  384 bits (986), Expect = e-105,   Method: Composition-based stats.
 Identities = 165/264 (62%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H++  G  R DRTG GT S FG+QMRF+LS GFPL+TTKKVH KSVVHELL
Sbjct: 1   MQAYLSLLSHLLDNGVLRDDRTGTGTYSVFGHQMRFELSDGFPLVTTKKVHMKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  HGV IWDEWAD++G LGP+YG QWRSWP   G  IDQI+ +   +R
Sbjct: 61  WFLSGDTNIGYLKEHGVRIWDEWADENGNLGPVYGAQWRSWPGPGGKTIDQIAWVQNEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWN   +D+MAL PCHCLFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 HNPTSRRLVVSAWNPGQLDQMALAPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA   G   G+F+H+ GDVHLY NH +QA  QL+R PR LPQ+ + P + D+ 
Sbjct: 181 YALLTHMLAQSTGLGVGDFVHSFGDVHLYTNHVDQAKQQLARQPRDLPQLRLAPEVSDIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYE  T+  Y+PH AI A V+V
Sbjct: 241 DFRYEHITVEGYDPHPAIKAPVAV 264


>gi|163868690|ref|YP_001609902.1| thymidylate synthase [Bartonella tribocorum CIP 105476]
 gi|189036927|sp|A9IW82|TYSY_BART1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|161018349|emb|CAK01907.1| Thymidylate synthase [Bartonella tribocorum CIP 105476]
          Length = 264

 Score =  384 bits (986), Expect = e-105,   Method: Composition-based stats.
 Identities = 177/264 (67%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL HV+  G DR DRTGVGTRS FGYQMRFDL  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKSYLALLSHVLNQGIDRTDRTGVGTRSIFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADK G LGP+YG QWRSWP  DG  IDQI ++++ ++
Sbjct: 61  WFLKGDTNIAWLKEHGVSIWDEWADKQGNLGPVYGYQWRSWPAPDGRHIDQIDNLLRMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN ALI++MALPPCHCLFQFY+D GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 EKPDSRRLIVSAWNPALIEEMALPPCHCLFQFYIDEGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHT GD HLY+NHFEQA  QLSR P  LP M INP + DL 
Sbjct: 181 YALLTMMIAQVSGLKVGDFIHTFGDAHLYSNHFEQAQYQLSRIPNALPCMRINPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +YE H  I A V++
Sbjct: 241 SFKFEDFELLNYEAHPHIKAPVAI 264


>gi|7766861|pdb|1EVF|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia
           Coli
          Length = 264

 Score =  384 bits (986), Expect = e-105,   Method: Composition-based stats.
 Identities = 150/263 (57%), Positives = 199/263 (75%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELLW
Sbjct: 2   KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRXHLRSIIHELLW 61

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ 
Sbjct: 62  FLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKN 121

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNV  +DKMAL P H  FQFYV +GKLSCQLYQR+ DVFLG+PFNIASY
Sbjct: 122 DPDSRRIIVSAWNVGELDKMALAPXHAFFQFYVADGKLSCQLYQRTXDVFLGLPFNIASY 181

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  
Sbjct: 182 ALLVHMMAQQXDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD 241

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+EDF +  Y+PH  I A V++
Sbjct: 242 YRFEDFEIEGYDPHPGIKAPVAI 264


>gi|114706847|ref|ZP_01439747.1| thymidylate synthase [Fulvimarina pelagi HTCC2506]
 gi|114537795|gb|EAU40919.1| thymidylate synthase [Fulvimarina pelagi HTCC2506]
          Length = 264

 Score =  384 bits (986), Expect = e-105,   Method: Composition-based stats.
 Identities = 172/264 (65%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+DR DRTG GTRS FG+QMRFDL +GFPLLTTK++H +S+VHELL
Sbjct: 1   MRQYLDLLARVLGEGTDRPDRTGTGTRSVFGHQMRFDLGEGFPLLTTKRLHIRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV IWDEWAD++G+LGP+YG QWRSWPDYDG  IDQIS ++ +LR
Sbjct: 61  WFLKGDTNIAYLKANGVRIWDEWADENGDLGPVYGAQWRSWPDYDGGTIDQISGVLDTLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P+SRR IVSAWN AL+D MALPPCHCLFQFYV NGKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPHSRRLIVSAWNPALVDTMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY +H EQA LQL R+P  LP + +NP++ DL 
Sbjct: 181 YALLTHMIAQASGLDVGDFVHTLGDAHLYADHLEQARLQLDRTPGPLPVLKLNPDVRDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F + D  + +YE    I A +SV
Sbjct: 241 AFTFADVAIENYEAQPHIAAPISV 264


>gi|254429983|ref|ZP_05043690.1| thymidylate synthase [Alcanivorax sp. DG881]
 gi|196196152|gb|EDX91111.1| thymidylate synthase [Alcanivorax sp. DG881]
          Length = 277

 Score =  384 bits (986), Expect = e-105,   Method: Composition-based stats.
 Identities = 168/277 (60%), Positives = 213/277 (76%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV + G+ + DRTG GT + FGYQMR+DLS+GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLRHVRENGTYKEDRTGTGTYAVFGYQMRYDLSQGFPMLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWD WA  +GELGP+YG QWRSW   DG VIDQIS +++ ++
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDGWATPEGELGPVYGEQWRSWKTPDGGVIDQISEVLEEIK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN A++              K ALPPCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 RNPDSRRLVVSAWNPAVLPDPSISPDANAAAGKQALPPCHCLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GD+FLG+PFNIASY+LLT+M+A V   Q G+F+HTLGD HLY+NH EQAD QL+R+P  L
Sbjct: 181 GDIFLGVPFNIASYALLTLMMAQVCDLQPGDFVHTLGDAHLYSNHLEQADTQLARTPGPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +F ++DFT+ +YEP A I A V++
Sbjct: 241 PTMTLNPAVKDLFAFTFDDFTVSNYEPAAHIKAPVAI 277


>gi|21230261|ref|NP_636178.1| thymidylate synthase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769746|ref|YP_244508.1| thymidylate synthase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188992959|ref|YP_001904969.1| thymidylate synthase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|25091468|sp|Q8PCE7|TYSY_XANCP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|81304300|sp|Q4UR35|TYSY_XANC8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|21111806|gb|AAM40102.1| thymidylate synthase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575078|gb|AAY50488.1| thymidylate synthase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167734719|emb|CAP52929.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 264

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+HV+++G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLELLQHVLEYGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLQGDTNIAYLKDNQVRIWDEWADANGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP++ DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRPLPTLRLNPDVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED  +  Y+PH AI A V+V
Sbjct: 241 AFRFEDIAIDGYDPHPAIKAPVAV 264


>gi|50954682|ref|YP_061970.1| thymidylate synthase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|62901289|sp|Q6AFI0|TYSY_LEIXX RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|50951164|gb|AAT88865.1| thymidylate synthase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 269

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 165/261 (63%), Positives = 197/261 (75%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  GS + DRTG GTRS FG Q+RFDL+ GFPL+TTK+VH+KS+ +ELLWFL
Sbjct: 9   YEDLLRDVLANGSHKSDRTGTGTRSVFGRQLRFDLADGFPLITTKRVHFKSIAYELLWFL 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +GVSIWDEWAD+ GELGP+YGVQWRSWP  DG  IDQI  +V +LR DP
Sbjct: 69  RGDSNVGWLRENGVSIWDEWADERGELGPVYGVQWRSWPSPDGTHIDQIQQVVDTLRRDP 128

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNVA I  MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 129 DSRRIIVSAWNVADIPDMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 188

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT+M+A  +G + GEF+ T GDVH+Y+NH EQ + QLSR+P   P +        +  +R
Sbjct: 189 LTLMVAQQVGLEPGEFVWTGGDVHIYDNHIEQVNEQLSRNPFPAPALRFARRPESVFDYR 248

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YEDF L  Y  H AI A V+V
Sbjct: 249 YEDFVLEGYRHHPAIRAAVAV 269


>gi|212639286|ref|YP_002315806.1| thymidylate synthase [Anoxybacillus flavithermus WK1]
 gi|226713165|sp|B7GI39|TYSY_ANOFW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|212560766|gb|ACJ33821.1| Thymidylate synthase [Anoxybacillus flavithermus WK1]
          Length = 264

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 192/264 (72%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL  +++ G  + DRTG GT S FG Q+RFDL +GFPLLTTKK+H +S++HELL
Sbjct: 1   MKQYLQLLEDILQNGVYKDDRTGTGTLSVFGRQLRFDLREGFPLLTTKKLHIRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV+IWDEWAD+ G+LGP+YG QWRSW   DG  IDQIS +++ ++
Sbjct: 61  WFLSGDTNIRYLKENGVTIWDEWADEKGDLGPVYGAQWRSWRGADGRTIDQISEVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA +D M LPPCH  FQFYV+NG LSC   QRS D FLG+PFNIAS
Sbjct: 121 TNPNSRRLLVSAWNVAELDHMKLPPCHYAFQFYVENGTLSCMWQQRSVDTFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     Q  E I T GDVHLY NH EQA LQL+R PR LP++II      + 
Sbjct: 181 YALLTYMVAQQCDLQPKELIFTGGDVHLYMNHIEQAKLQLTREPRPLPKLIIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y+PH  I A VSV
Sbjct: 241 EYRFEDFEIVDYDPHPHIKADVSV 264


>gi|226361376|ref|YP_002779154.1| thymidylate synthase [Rhodococcus opacus B4]
 gi|226239861|dbj|BAH50209.1| thymidylate synthase [Rhodococcus opacus B4]
          Length = 267

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 156/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR++L+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 8   YEDLLRLVMDTGTPKADRTGTGTRSVFGHQMRWNLADGFPLVTTKKVHLKSIVYELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +GV+IWDEWAD DGELGP+YGVQWRSWP   G  IDQIS  +++L+++P
Sbjct: 68  RGDSNVKWLQDNGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQISQTIETLKSNP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 128 DSRRIIVSAWNVGDIPQMALAPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 187

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G + G+FI T GD H+Y+NH +Q   QLSR P   P + +N     +  + 
Sbjct: 188 LTHMVAQQAGLEPGDFIWTGGDCHIYDNHVDQVAEQLSREPLPYPTLKLNRR-DSIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y  H AI A V+V
Sbjct: 247 FEDVEIVDYRHHPAIKAPVAV 267


>gi|114776706|ref|ZP_01451749.1| thymidylate synthase [Mariprofundus ferrooxydans PV-1]
 gi|114552792|gb|EAU55223.1| thymidylate synthase [Mariprofundus ferrooxydans PV-1]
          Length = 277

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 159/277 (57%), Positives = 201/277 (72%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+RHV   G+ + DRTG GTRS FG+QMRFDLS GFP++TTKKVH KS++HELL
Sbjct: 1   MKSYLDLMRHVRDHGTQKGDRTGTGTRSVFGHQMRFDLSAGFPMVTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N +YL  +GVSIW+EWA +DG LGP+YG QWR+WP   G  IDQIS +++ ++
Sbjct: 61  WFLKGETNTAYLSENGVSIWNEWATEDGSLGPVYGYQWRNWPTPSGESIDQISELIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
           A P SRR IVSAWNVA +              KMAL PCH  FQFYV +GKLSCQLYQRS
Sbjct: 121 ARPNSRRLIVSAWNVADLPDESISPQANVAEGKMALAPCHAFFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V   + G+FIHT GD HLY+NH EQ + QL+R    L
Sbjct: 181 ADIFLGVPFNIASYALLTMMIAQVCELEPGDFIHTFGDAHLYSNHTEQVETQLARECYPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + ++  F Y+DF L  Y+ H  I A +++
Sbjct: 241 PTMKLNPAVKNIFDFTYDDFELSDYQCHPGIRAPIAI 277


>gi|325928230|ref|ZP_08189435.1| thymidylate synthase [Xanthomonas perforans 91-118]
 gi|325541390|gb|EGD12927.1| thymidylate synthase [Xanthomonas perforans 91-118]
          Length = 264

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 158/264 (59%), Positives = 207/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL+HV++ G+++ DRTG GTRS FG+QMRF L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLELLQHVLEHGAEKSDRTGTGTRSVFGWQMRFHLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD +G+LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIGYLSDNQVRIWDEWADDNGDLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NG+LSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGRLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ED ++  Y+PH AI A V+V
Sbjct: 241 AFRFEDISIEGYDPHPAIKAPVAV 264


>gi|257092198|ref|YP_003165839.1| Thymidylate synthase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257044722|gb|ACV33910.1| Thymidylate synthase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 273

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 164/273 (60%), Positives = 209/273 (76%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HV++ G  + DRTG GTRS FG+QMRFDL+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MQQYLDLMHHVLEHGVSKADRTGTGTRSVFGWQMRFDLAAGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL  +GV IWDEWAD++G+LGP+YG QWR W   DG  IDQI+ +V +L+
Sbjct: 61  WFLRGDTNVRYLQENGVRIWDEWADENGDLGPVYGRQWRHWQAADGREIDQIAQLVDNLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV---------DNGKLSCQLYQRSGDVF 171
            +P SRRH+++AWN   +++MALPPCH L QFYV            +LSCQLYQRS D+F
Sbjct: 121 KNPDSRRHLLTAWNPGDVERMALPPCHALCQFYVAPASASATDRRPQLSCQLYQRSADIF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V  ++ G+F+HT GD HLY NHF+QA LQL+R+ R LP M 
Sbjct: 181 LGVPFNIASYALLTMMVAQVCNYRPGDFVHTFGDAHLYGNHFDQARLQLTRATRALPTMR 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +NP + DL +FR+EDFTL  Y+PH  I A V+V
Sbjct: 241 LNPEVDDLFAFRFEDFTLEGYDPHPHIAAAVAV 273


>gi|298372619|ref|ZP_06982609.1| thymidylate synthase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275523|gb|EFI17074.1| thymidylate synthase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 264

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 162/264 (61%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  ++  G++R DRTG GT   FG+QMRFDL +GFPLLTTKK+H KS+++ELL
Sbjct: 1   MKQYHDLLNRILNEGTERSDRTGTGTIGIFGHQMRFDLRQGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  +GVSIW+EWAD +G+LG IYG QWRSW  YDG  IDQIS   ++++
Sbjct: 61  WFLKGDTNVRYLQDNGVSIWNEWADANGDLGHIYGYQWRSWRGYDGETIDQISEAEETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DPYSRR IV+AWNV  +  M LPPCH  FQFYV NGKLS Q+YQRS DVFLG+PFNIAS
Sbjct: 121 NDPYSRRIIVNAWNVGDLKNMNLPPCHTFFQFYVANGKLSLQMYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A   G + GEF+HTLGD H+Y NH EQ  LQL+R PR LP+M IN  +  + 
Sbjct: 181 YALLLQMMAQTTGLEAGEFVHTLGDAHIYKNHLEQVQLQLTREPRPLPKMNINKEVRSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y+P+  I  KV+V
Sbjct: 241 DFRYEDFCLTDYDPYPHIAGKVAV 264


>gi|49474436|ref|YP_032478.1| thymidylate synthase [Bartonella quintana str. Toulouse]
 gi|62901308|sp|Q6FZ91|TYSY_BARQU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|49239940|emb|CAF26342.1| Thymidylate synthase [Bartonella quintana str. Toulouse]
          Length = 264

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 180/264 (68%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRFDL  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKTYLDLLSHVLNKGIDRTDRTGVGTRSVFGYQMRFDLQIGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV++L  HGVSIWDEWAD+ G LGPIYG QWRSWP  DG  IDQIS ++  ++
Sbjct: 61  WFLRGDTNVAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPASDGRYIDQISRLLTMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN ALI++MALPPCHC FQFYV + KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KTPDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADDKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA  QLSR P  LP M+INP++ DL 
Sbjct: 181 YALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRIPNALPSMLINPSVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +YE    I A V+V
Sbjct: 241 SFKFEDFELLNYEAQPHIKAPVAV 264


>gi|88812437|ref|ZP_01127686.1| thymidylate synthase [Nitrococcus mobilis Nb-231]
 gi|88790223|gb|EAR21341.1| thymidylate synthase [Nitrococcus mobilis Nb-231]
          Length = 277

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 164/277 (59%), Positives = 205/277 (74%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LLRHV+  G  + DRTG GT S FGYQMRFDL +G PLLTTK++H +S+VHELL
Sbjct: 1   MKQYLELLRHVLHQGVRKSDRTGTGTLSVFGYQMRFDLQQGLPLLTTKRLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L G+SN+ YL  +GVSIWDEWAD++GELGPIYG QWR WP  DG+ IDQI+ ++  ++
Sbjct: 61  WLLSGESNIGYLKENGVSIWDEWADENGELGPIYGPQWRKWPAQDGSTIDQITDVIDGIK 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRRHIVSAWNVA + +             MALP CH LFQFYV +GKLSCQLYQRS
Sbjct: 121 QNPNSRRHIVSAWNVAYLPEESLSPQANVAQGRMALPACHALFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLT M+A   G   G+F+ T GDVH+Y+NH EQA LQLSR+PR L
Sbjct: 181 CDVFLGVPFNIASYALLTHMIAQECGLAPGDFVWTGGDVHVYSNHLEQARLQLSRAPRPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++II      + ++ Y+DF +  Y+PH AI A ++V
Sbjct: 241 PKLIIKRKPDSIFNYCYDDFEIVGYDPHPAIKAPIAV 277


>gi|146299231|ref|YP_001193822.1| thymidylate synthase [Flavobacterium johnsoniae UW101]
 gi|189036934|sp|A5FJV8|TYSY_FLAJO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|146153649|gb|ABQ04503.1| thymidylate synthase [Flavobacterium johnsoniae UW101]
          Length = 283

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 165/286 (57%), Positives = 210/286 (73%), Gaps = 25/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYLDLVKHVLENGNQKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IWDEWAD +G+LGP+YG QWR+W   +   IDQIS ++  L+
Sbjct: 61  WFLKGDTNIKYLKENGVKIWDEWADSNGDLGPVYGHQWRNW---NSEEIDQISELITELK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVD---------NGK 158
            +P SRR IVSAWN +++              K ALPPCH  FQFYV           GK
Sbjct: 118 TNPNSRRMIVSAWNPSVLPDTKKSFEENVANNKAALPPCHAFFQFYVASPDLEKGETKGK 177

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQLYQRS D+FLG+PFNIASY+LLTMM+A V   + GEFIHT GD H+YNNHFEQ +L
Sbjct: 178 LSCQLYQRSADIFLGVPFNIASYALLTMMIAQVCDLEPGEFIHTFGDAHIYNNHFEQLEL 237

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QLSR P+ LP+MI+NP I ++  F Y+DFTL  Y+PH AI   V+V
Sbjct: 238 QLSREPKPLPKMILNPEIKNIFDFDYDDFTLVDYDPHPAIQGSVAV 283


>gi|255077932|ref|XP_002502546.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Micromonas sp. RCC299]
 gi|226517811|gb|ACO63804.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Micromonas sp. RCC299]
          Length = 523

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 128/282 (45%), Positives = 180/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL++ +++ G+ + DRTG GT S FG QMRFDL + FPLLTTK+V W+ V  EL+WF
Sbjct: 242 QYLDLIKEIMEEGNVKGDRTGTGTISKFGCQMRFDLRRSFPLLTTKRVFWRGVAEELIWF 301

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           ++G ++   L    + IWD                ++G+LGP+YG QWR +         
Sbjct: 302 VKGCTSAKELQDKDIHIWDGNGSREYLDSVGLGHREEGDLGPVYGFQWRHFGAEYKDMHA 361

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ++ ++  ++ +P  RR +++AWN A + +MALPPCH   QFYV NG+LSCQ
Sbjct: 362 DYTGQGVDQLAEVIDKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSCQ 421

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H  GD H+Y+NH E    QL  
Sbjct: 422 MYQRSCDMGLGVPFNIASYSLLTCMVAQVCGLKPGDFVHCCGDTHVYSNHVEPLYKQLEN 481

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P + INP   D+ SF + DF +  Y+PH  I  +++V
Sbjct: 482 EPRPFPTLKINPEKKDIDSFEFSDFEIVDYDPHPKIAMQMAV 523


>gi|325922408|ref|ZP_08184177.1| thymidylate synthase [Xanthomonas gardneri ATCC 19865]
 gi|325547105|gb|EGD18190.1| thymidylate synthase [Xanthomonas gardneri ATCC 19865]
          Length = 264

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 205/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+HV++ G+++ DRTG GTRS FG+QMRFDL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MKPYLDLLQHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNDGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + V IWDEWAD DG LGP+YG QWR W   DG  IDQ+  +V  ++
Sbjct: 61  WFLQGDTNIGYLKDNQVRIWDEWADADGNLGPVYGKQWRRWTGPDGVEIDQMQWLVDEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR ++SAWNV  + +MAL PCH LFQFYV NGKLSCQLYQRSGD+FLG+PFNIAS
Sbjct: 121 RNPDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY+NHFEQA  QL+R+PR LP + +NP + DL 
Sbjct: 181 YALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPTLRLNPEVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +FR+ D  +  Y+PH AI A V+V
Sbjct: 241 AFRFADIAIDGYDPHPAIKAPVAV 264


>gi|54026996|ref|YP_121238.1| thymidylate synthase [Nocardia farcinica IFM 10152]
 gi|62901241|sp|Q5YPL7|TYSY_NOCFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54018504|dbj|BAD59874.1| putative thymidylate synthase [Nocardia farcinica IFM 10152]
          Length = 266

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 166/263 (63%), Positives = 198/263 (75%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY DLLR V+  G+ + DRTG GTRS FG+Q+R+DLS GFPL+TTKKVH KS+V+ELLW
Sbjct: 5   RQYEDLLRLVLDTGTAKGDRTGTGTRSIFGHQLRYDLSAGFPLITTKKVHLKSIVYELLW 64

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGDSNV +L  HGV+IWDEWAD  GELGP+YGVQWRSWP  DG  IDQIS ++Q+LR 
Sbjct: 65  FLRGDSNVGWLREHGVTIWDEWADPQGELGPVYGVQWRSWPTPDGTHIDQISQVLQTLRT 124

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IVSAWNVA +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY
Sbjct: 125 DPDSRRMIVSAWNVAELDRMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASY 184

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A     + GEFI T GD H+Y+NH EQ   QL R P   P++ + P    L  
Sbjct: 185 ALLTHMVAQQTELEPGEFIWTGGDCHIYDNHVEQVTEQLGREPYPFPRLELRPAP-SLFD 243

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           +R+ED T+  Y  H AI A V+V
Sbjct: 244 YRFEDVTVTDYRHHPAIKAPVAV 266


>gi|145588568|ref|YP_001155165.1| thymidylate synthase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189036940|sp|A4SVT7|TYSY_POLSQ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145046974|gb|ABP33601.1| thymidylate synthase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 264

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 151/264 (57%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L++ V+  G  + DRTG GT S FG+QMRF+L+ GFP++TTKK+H KS+V+ELL
Sbjct: 1   MRQYHNLMKEVLAKGVQKSDRTGTGTISVFGHQMRFNLADGFPMVTTKKLHMKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G ++ ++L   GVSIW+EWA  DG+LGPIYG QWRSWP  +G  IDQIS +V++++
Sbjct: 61  WFLKGSTDNNWLKERGVSIWNEWAAPDGDLGPIYGYQWRSWPAPNGQHIDQISEVVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRIIVSAWNVADIPRMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+FI T GD HLY+NH EQ DLQLSR    LP++ I      L 
Sbjct: 181 YALLTHMVAQQCNLEVGDFIWTGGDCHLYSNHLEQVDLQLSRDFLPLPKLNILRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  YE H  I A V++
Sbjct: 241 DYEFEDFEIVGYESHPHIKAPVAI 264


>gi|302529833|ref|ZP_07282175.1| thymidylate synthase [Streptomyces sp. AA4]
 gi|302438728|gb|EFL10544.1| thymidylate synthase [Streptomyces sp. AA4]
          Length = 265

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 161/262 (61%), Positives = 203/262 (77%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL+HV+  G+++ DRTG GTRS FG+Q+R+ L+ GFPL+TTKKVH++S+ +ELLWF
Sbjct: 5   QYEDLLQHVLDTGAEKGDRTGTGTRSIFGHQLRYRLADGFPLITTKKVHFRSIAYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV++L  HGV+IWDEWA  DG+LGP+YGVQWRSWP  DG  +DQIS ++++LR +
Sbjct: 65  LRGDSNVTWLRDHGVTIWDEWAAPDGDLGPVYGVQWRSWPTPDGGHVDQISDVLRTLREN 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  I +MALPPCH  FQFYV NG+LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRIIVSAWNVGDIPQMALPPCHAFFQFYVANGELSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A  +G + G+FI T GD H+Y+NH EQ   QLSR  R  P + + P    L  +
Sbjct: 185 LLTHMIADQVGLRVGDFIWTGGDCHIYDNHVEQVRKQLSRDARPFPTLSLKPA-ESLFDY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           RYEDF+L  Y+PH  I A V+V
Sbjct: 244 RYEDFSLEGYDPHPGIKAPVAV 265


>gi|148361180|ref|YP_001252387.1| thymidylate synthase [Legionella pneumophila str. Corby]
 gi|296108515|ref|YP_003620216.1| thymidylate synthase [Legionella pneumophila 2300/99 Alcoy]
 gi|166231709|sp|A5II41|TYSY_LEGPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148282953|gb|ABQ57041.1| thymidylate synthase (TS) [Legionella pneumophila str. Corby]
 gi|295650417|gb|ADG26264.1| thymidylate synthase [Legionella pneumophila 2300/99 Alcoy]
          Length = 264

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL
Sbjct: 1   MKTYLQLLEHILQQGVEKSDRTGTGTLSVFGYQMRFDLTKGFPLVTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG+ IDQ+S +VQ ++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGHTIDQLSDVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A        EFI T GD HLY NH EQA +QL+R P  LP + I      L 
Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLTIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +Y+ H AI A ++V
Sbjct: 241 DYAYEDFEFVNYQSHPAIKAPIAV 264


>gi|284033838|ref|YP_003383769.1| thymidylate synthase [Kribbella flavida DSM 17836]
 gi|283813131|gb|ADB34970.1| thymidylate synthase [Kribbella flavida DSM 17836]
          Length = 263

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 198/264 (75%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL HV+  G ++ DRTG GT S FG+Q R+DLS GFP++TTKK+H KSVV EL+
Sbjct: 1   MRQYLELLDHVLTHGVEKGDRTGTGTLSVFGHQARYDLSAGFPVVTTKKLHLKSVVGELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G ++V +L  +G+SIWDEWA  DGELGP+YG QWRSWP  DG  +DQI+ +++++R
Sbjct: 61  WFLSGSTSVKWLQENGISIWDEWAGDDGELGPVYGYQWRSWPTPDGRHVDQIAGVIEAIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRH+VSAWNVA +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRHLVSAWNVAELDDMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G   G+F+HTLGD HLY NH +QA LQL+R PR LP + +      + 
Sbjct: 181 YALLTHMVAQQTGLAVGDFVHTLGDAHLYLNHVDQAKLQLTREPRPLPTLRL-RERDSID 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           S+   D  L  Y+PH  I A ++V
Sbjct: 240 SYEIADVELIGYDPHPGIKAPIAV 263


>gi|303275197|ref|XP_003056897.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Micromonas pusilla CCMP1545]
 gi|226461249|gb|EEH58542.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Micromonas pusilla CCMP1545]
          Length = 524

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 132/282 (46%), Positives = 180/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL+R +I+ G+ + DRTG GT S FG  MRFDL + FPLLTTK+V W+ V  ELLWF
Sbjct: 243 QYLDLIRDIIESGNVKGDRTGTGTISKFGTSMRFDLRRSFPLLTTKRVFWRGVAEELLWF 302

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           + G +N   L    + IWD                ++ +LGP+YG QWR +         
Sbjct: 303 VGGRTNAKELQDKDIHIWDGNGSREYLDSVGLSHREEQDLGPVYGFQWRHFGAEYTDMHA 362

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +YDG  +DQ++ ++  ++ +P  RR +++AWN A + +MALPPCH   QFYV NG+LSCQ
Sbjct: 363 NYDGKGVDQLAEVIDKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSCQ 422

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H +GD H+Y+NH E    QL  
Sbjct: 423 MYQRSCDMGLGVPFNIASYSLLTCMIAQVCGLKPGDFVHVMGDTHVYSNHVEPLKKQLLC 482

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P + INP   D+ SF + DFT+  Y+PH  I  K++V
Sbjct: 483 EPRPFPTLKINPAKTDIDSFEFSDFTIEGYDPHPKIEMKMAV 524


>gi|269795625|ref|YP_003315080.1| thymidylate synthase [Sanguibacter keddieii DSM 10542]
 gi|269097810|gb|ACZ22246.1| thymidylate synthase [Sanguibacter keddieii DSM 10542]
          Length = 271

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 154/262 (58%), Positives = 197/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLRHV+  G+ + DRTG GTRS FG+QMRFDLS+GFPL+TTK+VH +SVV ELLWF
Sbjct: 11  QYEDLLRHVMAHGTRKSDRTGTGTRSVFGHQMRFDLSEGFPLVTTKRVHLRSVVGELLWF 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  +GV IW+EWAD DGELGP+YGVQWRSWP  DG  +DQ++ ++++LR +
Sbjct: 71  LRGDSNVGWLQENGVRIWNEWADDDGELGPVYGVQWRSWPTPDGQHVDQVAQVLETLRTN 130

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA +D MAL PCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 131 PDSRRMIVSAWNVADLDAMALMPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYA 190

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A  +G + G+F+ T GD H+Y+NH +Q    L R P   P++ +      L  +
Sbjct: 191 LLTHMVAQQVGLEVGDFVWTGGDCHVYDNHVDQVAELLGREPYPFPRLEL-RQAASLFDY 249

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            ++D T+  Y+ H  I A V+V
Sbjct: 250 TFDDVTVEGYQHHPTIPAPVAV 271


>gi|171463169|ref|YP_001797282.1| Thymidylate synthase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192707|gb|ACB43668.1| Thymidylate synthase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 264

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 149/264 (56%), Positives = 192/264 (72%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ V+  G  + DRTG GT S FG+QMRF+L  GFP++TTKK+H KS+++ELL
Sbjct: 1   MRQYHDLMKEVLTKGVQKSDRTGTGTVSVFGHQMRFNLLDGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N ++L   GVSIW+EWA  DG+LGPIYG QWRSWP  +G  IDQIS +V++++
Sbjct: 61  WFLKGSTNNNWLKERGVSIWNEWAAPDGDLGPIYGYQWRSWPTPNGQHIDQISEVVETIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFN AS
Sbjct: 121 KNPDSRRIIVSAWNVADIPRMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNTAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT ++A     + G+FI T GD HLY+NH EQ DLQLSR    LP++ I      + 
Sbjct: 181 YALLTHIMAQQCNLEVGDFIWTGGDCHLYSNHLEQVDLQLSRDFFPLPKLNILRKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  YE H  I A V++
Sbjct: 241 EYEFEDFEITGYESHPHIKAPVAI 264


>gi|329911715|ref|ZP_08275594.1| Thymidylate synthase [Oxalobacteraceae bacterium IMCC9480]
 gi|327545812|gb|EGF30934.1| Thymidylate synthase [Oxalobacteraceae bacterium IMCC9480]
          Length = 264

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD +RHV + G+++ DRTG GTRS FGYQMRF L  GFPLLTTKK+H KS++HEL+
Sbjct: 1   MRQYLDFMRHVQQHGTEKTDRTGTGTRSVFGYQMRFALQDGFPLLTTKKLHLKSILHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N++YL  +GVSIWD+WAD DG LGPIYG QWRSWP  DG+ IDQI+ ++  ++
Sbjct: 61  WFLNGATNIAYLKENGVSIWDDWADADGNLGPIYGYQWRSWPTPDGSHIDQITQVMDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNVA I  M LPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPDSRRMIVSAWNVADIPNMKLPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + G+F+ T GD HLY+NH EQ DLQL+R+P+ LP ++I      + 
Sbjct: 181 YALLTHMMAQQAGLEVGDFVWTGGDCHLYSNHMEQVDLQLTRTPQALPTLVIKRKPASIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R+EDF +  Y P A I A V+V
Sbjct: 241 DYRFEDFEITGYTPDAHIKAPVAV 264


>gi|254292830|ref|YP_003058853.1| thymidylate synthase [Hirschia baltica ATCC 49814]
 gi|254041361|gb|ACT58156.1| thymidylate synthase [Hirschia baltica ATCC 49814]
          Length = 264

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 204/264 (77%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ V+  G +R DRTG GT+  FG QMRFDLS+ FP+LTTKK+H +S++ ELL
Sbjct: 1   MRQYLDLLQDVLDNGVERGDRTGTGTKGVFGRQMRFDLSETFPILTTKKLHLRSIIIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSW   DG VIDQIS ++  ++
Sbjct: 61  WFLKGDTNIKYLTDNKVSIWDEWADENGDLGPVYGKQWRSWAAPDGRVIDQISWVLNEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPNSRRLIVSAWNPADVNDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A   G + GEF+H+ GD HLY NH EQA LQL+R  + LP M +NP+  DL 
Sbjct: 181 YALLTMMMARATGLEAGEFVHSFGDAHLYMNHIEQAKLQLTRDTKQLPIMTLNPDKTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDFTL  YE H  I A ++V
Sbjct: 241 GWDYEDFTLHGYEAHPTIKAPIAV 264


>gi|312138557|ref|YP_004005893.1| thymidylate synthase [Rhodococcus equi 103S]
 gi|311887896|emb|CBH47208.1| thymidylate synthase [Rhodococcus equi 103S]
          Length = 273

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 156/261 (59%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR+DL++GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 14  YEDLLRLVMDTGTAKADRTGTGTRSVFGHQMRWDLAEGFPLITTKKVHLKSIVYELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  HGV+IWDEWAD DGELGP+YGVQWRSWP   G  IDQI+ ++++L+ +P
Sbjct: 74  RGESNVKWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITKVIETLKTNP 133

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNVA +D MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 134 DSRRIIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 193

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A     + G+FI T GD H+Y+NH +Q   QLSR P   P + +N     +  + 
Sbjct: 194 LTHMVAQQADLEVGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLN-KRDSIFDYT 252

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y  H AI A V+V
Sbjct: 253 FEDVEIVDYRHHPAIKAPVAV 273


>gi|302383585|ref|YP_003819408.1| thymidylate synthase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194213|gb|ADL01785.1| thymidylate synthase [Brevundimonas subvibrioides ATCC 15264]
          Length = 288

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 165/262 (62%), Positives = 201/262 (76%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LLR ++  G  R DRTG GT   FG QMRFDLSKGFPLLTTKK+H +S++ ELLWF
Sbjct: 28  QYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPLLTTKKLHLRSIIVELLWF 87

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG++N+ +L  +G SIWDEWAD+ GELGP+YG QWRSW   +G  IDQI+ +++ L+ +
Sbjct: 88  LRGETNIRWLKDNGCSIWDEWADESGELGPVYGKQWRSWAAPNGESIDQIARLIEGLKTN 147

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRRHIVSAWN A I+ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 148 PNSRRHIVSAWNPADIEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 207

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLTMM+A V+G + G+F+HT GD HLY+NH EQA LQL+R P  LP M I P   DL +F
Sbjct: 208 LLTMMVAEVVGLEPGDFVHTFGDAHLYSNHIEQAQLQLTRQPLALPTMTIAPK-RDLFAF 266

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
              DF L  YE H  I A V++
Sbjct: 267 EPGDFVLSGYEAHPHIKAAVAI 288


>gi|229496508|ref|ZP_04390222.1| thymidylate synthase [Porphyromonas endodontalis ATCC 35406]
 gi|229316405|gb|EEN82324.1| thymidylate synthase [Porphyromonas endodontalis ATCC 35406]
          Length = 265

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 176/265 (66%), Positives = 210/265 (79%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+ ++  G+ R DRTG GT+S FG+QMRFDL  GFPLLTTKK+H KS+++ELL
Sbjct: 1   MRQYLELLQKIMDEGTLRSDRTGTGTKSIFGHQMRFDLEDGFPLLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD-GNVIDQISSIVQSL 119
           WFLRGDSNV+YL  HGVSIWDEWAD +G LGPIYGVQWRSWP Y+ G   DQI+ +V+ +
Sbjct: 61  WFLRGDSNVAYLQEHGVSIWDEWADPEGNLGPIYGVQWRSWPSYNQGEAYDQIAQVVEDI 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWNVA ID+MALPPCHCL QFYV NG+LS QLYQRSGDVFLG+PFNIA
Sbjct: 121 RTSPDSRRLMVSAWNVAQIDQMALPPCHCLMQFYVANGRLSLQLYQRSGDVFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LL MM+A V G + G F+HTLGD HLY NH EQ  LQL+RSPRTLP M +NP + +L
Sbjct: 181 SYALLLMMVAQVTGLKPGTFVHTLGDAHLYCNHLEQTALQLTRSPRTLPTMQLNPEVRNL 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F++EDF L  Y PH  I A ++V
Sbjct: 241 EDFKFEDFKLLDYTPHPHIAAPIAV 265


>gi|319407478|emb|CBI81128.1| Thymidylate synthase [Bartonella sp. 1-1C]
          Length = 264

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 177/264 (67%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRF+L  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKAYLDLLFHVLNDGIDRFDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADK G+LGPIYG QWRSWP  DG  IDQI +++  ++
Sbjct: 61  WFLKGDTNITWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTPDGRHIDQIKNLLAMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +PYSRR IVSAWN A I++MALPPCHCLFQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPYSRRLIVSAWNPAAIEEMALPPCHCLFQFYVAAGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A +   Q G+FIHTLGD HLY NHFEQA+ QLSR+P+ LP M+INP + +L 
Sbjct: 181 YALLTMMIAQINHLQVGDFIHTLGDAHLYLNHFEQAEQQLSRTPKALPTMLINPEVKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF ++DF L +YE    I A V+V
Sbjct: 241 SFTFKDFELLNYEAFPHIKAPVAV 264


>gi|49475832|ref|YP_033873.1| thymidylate synthase [Bartonella henselae str. Houston-1]
 gi|62901309|sp|Q6G2S8|TYSY_BARHE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|49238640|emb|CAF27884.1| Thymidylate synthase [Bartonella henselae str. Houston-1]
          Length = 264

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 178/264 (67%), Positives = 209/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRFDL  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKTYLDLLSHVLNKGIDRTDRTGVGTRSVFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+++L  HGVSIWDEWAD+ G LGPIYG QWRSWP  DG  IDQIS+++  ++
Sbjct: 61  WFLRGDTNIAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPAPDGRHIDQISNLLMMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A I +MALPPCHC FQFYV +GKLSCQLYQRS D+FLGIPFNIAS
Sbjct: 121 KTPDSRRLIVSAWNPASIKEMALPPCHCFFQFYVADGKLSCQLYQRSADIFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA  QLSR P  LP M INP + DL 
Sbjct: 181 YALLTMMIAQVSGLKVGDFIHTLGDAHLYSNHFEQAQHQLSRIPNALPFMRINPAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +Y+    I A ++V
Sbjct: 241 SFKFEDFELLNYDAQPHIKAPIAV 264


>gi|254784598|ref|YP_003072026.1| thymidylate synthase [Teredinibacter turnerae T7901]
 gi|259550813|sp|C5BMA3|TYSY_TERTT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|237686344|gb|ACR13608.1| thymidylate synthase [Teredinibacter turnerae T7901]
          Length = 277

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 162/277 (58%), Positives = 201/277 (72%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+RHV   G  + DRTG GT S FGYQMRFDLS+GFPL+TTKK H KS++HELL
Sbjct: 1   MKQYLELMRHVRDNGVRKEDRTGTGTVSVFGYQMRFDLSQGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N++YL+ +GV IWD WA + G+LGPIYG QWRSWP  +G  +DQIS +++ ++
Sbjct: 61  WFLNGETNIAYLNNNGVKIWDAWATESGDLGPIYGAQWRSWPAQNGETLDQISQLIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR I+SAWN AL+              KMALPPCH LFQFYV  G+LSCQLYQRS
Sbjct: 121 HKPDSRRLIISAWNPALLPDESISPQDNVRNGKMALPPCHTLFQFYVLEGRLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G   G+F+HT GD HLY NH EQ D QL R P  L
Sbjct: 181 ADIFLGVPFNIASYALLTMMIAQVTGLAPGDFVHTFGDAHLYLNHLEQVDTQLQRQPLPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP + D+  F ++DF L++Y+ H  I A +SV
Sbjct: 241 PTMAINPAVKDIFGFCFDDFELQNYQAHPHIAAPISV 277


>gi|333029205|ref|ZP_08457266.1| Thymidylate synthase [Bacteroides coprosuis DSM 18011]
 gi|332739802|gb|EGJ70284.1| Thymidylate synthase [Bacteroides coprosuis DSM 18011]
          Length = 264

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ V   G+ + DRTG GT S FG+QMRF+++ GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLQRVKSEGAKKEDRTGTGTISVFGHQMRFNMADGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV+YL  HGV IW+EWAD +G LGPIYG QWRSWP Y+G   DQI   ++ ++
Sbjct: 61  WFLNGDTNVTYLQDHGVRIWNEWADSNGNLGPIYGYQWRSWPGYNGETFDQIKEAIRMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWNV  I +M LPPCH LFQFYV NGKLS QLYQRS D+FLG+PFNIAS
Sbjct: 121 ETPDSRRILVSAWNVGCISEMKLPPCHILFQFYVANGKLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G + GEFIHTLGD H+YNNH EQ DLQL+R PR LP+M INP + ++ 
Sbjct: 181 YALLLQMVAQVTGLEAGEFIHTLGDAHIYNNHLEQVDLQLTREPRKLPKMHINPRVKEID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y P+  I  KVSV
Sbjct: 241 QFKFEDFELTDYNPYPHIPGKVSV 264


>gi|319404485|emb|CBI78092.1| Thymidylate synthase [Bartonella rochalimae ATCC BAA-1498]
          Length = 264

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 174/264 (65%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRF+L  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKAYLDLLFHVLNNGIDRFDRTGVGTRSVFGYQMRFNLQDGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+++L  HGVSIWDEWADK G+LGPIYG QWRSWP  DG  IDQI +++  ++
Sbjct: 61  WFLKGDTNITWLKEHGVSIWDEWADKKGDLGPIYGYQWRSWPTSDGRHIDQIKNLLAMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DPYSRR +VSAWN A I++MALPPCHCLFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KDPYSRRLVVSAWNPAAIEEMALPPCHCLFQFYVAAGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A +   Q G+FIHT+GD HLY NHFEQA  QLSR+P+ LP M+INP + +L 
Sbjct: 181 YALLTMMIAQINHLQVGDFIHTIGDAHLYLNHFEQAKQQLSRTPKALPTMLINPEVKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+++DF L +YE    I A V+V
Sbjct: 241 SFKFKDFELLNYEAFPHIKAPVAV 264


>gi|16126363|ref|NP_420927.1| thymidylate synthase [Caulobacter crescentus CB15]
 gi|221235145|ref|YP_002517581.1| thymidylate synthase [Caulobacter crescentus NA1000]
 gi|25091488|sp|Q9A6H0|TYSY_CAUCR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|13423613|gb|AAK24095.1| thymidylate synthase [Caulobacter crescentus CB15]
 gi|220964317|gb|ACL95673.1| thymidylate synthase [Caulobacter crescentus NA1000]
          Length = 279

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 165/263 (62%), Positives = 206/263 (78%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL LL  +++ G  R DRTG GT   FG Q+RFDL+KGFP+LTTKK+H +S++ ELLW
Sbjct: 18  RQYLTLLADILENGVQRGDRTGTGTLGVFGRQIRFDLAKGFPVLTTKKLHLRSIIIELLW 77

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+GD+N++YL  +GV IWDEWAD++G+LGP+YG QWRSW   DG VIDQIS++V++L+A
Sbjct: 78  FLKGDTNIAYLKDNGVRIWDEWADENGDLGPVYGKQWRSWATPDGRVIDQISALVENLKA 137

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRRHIV+AWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 138 NPNSRRHIVTAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASY 197

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT+M+A V+G + GEF+HT GD HLY NH +QA  QL+R P   P M I  +  DL  
Sbjct: 198 ALLTLMVAKVVGLEPGEFVHTFGDAHLYLNHLDQAREQLTREPFDFPTMKIA-DKRDLFG 256

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           F YEDFTL  Y+ H  I A+VSV
Sbjct: 257 FEYEDFTLEGYQAHPHIKAEVSV 279


>gi|54298860|ref|YP_125229.1| thymidylate synthase [Legionella pneumophila str. Paris]
 gi|62901234|sp|Q5X119|TYSY_LEGPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|53752645|emb|CAH14080.1| Thymidylate synthase [Legionella pneumophila str. Paris]
          Length = 264

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 199/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL H+++ G ++ DRTG GT S FGYQMRFDL+KGFPL+TTKK+H +S+VHELL
Sbjct: 1   MKTYLQLLEHILQQGVEKSDRTGTGTLSVFGYQMRFDLTKGFPLVTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+SYL  +GV+IWDEWAD +G+LGP+YG QWRSWP  DG+ IDQ+S +VQ ++
Sbjct: 61  WFLRGDTNISYLKENGVTIWDEWADNNGDLGPVYGKQWRSWPTADGHTIDQLSDVVQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IVSAWNV  +DKMAL PCH LFQFYV N KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLIVSAWNVGELDKMALMPCHALFQFYVANNKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A        EFI T GD HLY NH EQA +QL+R P  LP + I      L 
Sbjct: 181 YSLLTHMVAQQCNLDVAEFIWTGGDCHLYLNHLEQAQIQLTREPLPLPSLTIKRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YEDF   +Y+ H AI A ++V
Sbjct: 241 DYAYEDFEFLNYQSHPAIKAPIAV 264


>gi|332519885|ref|ZP_08396349.1| thymidylate synthase [Lacinutrix algicola 5H-3-7-4]
 gi|332044444|gb|EGI80638.1| thymidylate synthase [Lacinutrix algicola 5H-3-7-4]
          Length = 274

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 154/277 (55%), Positives = 210/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHELVKHVLENGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GV IW+ WAD+ G+LGP+YG QWR+W   +   +DQI+ ++++L+
Sbjct: 61  WFLKGDTNINYLTENGVKIWNSWADEKGDLGPVYGHQWRNWNSDE---VDQITEVIETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G+Q GEFIHT GD H+YNNH EQ +LQ++R  R L
Sbjct: 178 ADIFLGVPFNIASYALFTMMIAQVCGYQAGEFIHTFGDAHIYNNHVEQLELQMTRDCRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP + D+  F++EDFTL  Y PH  I   V+V
Sbjct: 238 PKMKLNPEVKDIFEFKFEDFTLEDYNPHPHIKGAVAV 274


>gi|167647347|ref|YP_001685010.1| thymidylate synthase [Caulobacter sp. K31]
 gi|167349777|gb|ABZ72512.1| Thymidylate synthase [Caulobacter sp. K31]
          Length = 283

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 158/263 (60%), Positives = 201/263 (76%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+LL  +++ G +R DRTG GT+  FG Q+RFDLS+GFP+LTTKK+H +S++ ELLW
Sbjct: 22  RQYLNLLADILENGVERGDRTGTGTKGVFGRQIRFDLSQGFPVLTTKKLHLRSIIVELLW 81

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGD+NV YL  +G  IWDEWAD++G+LGP+YG QWRSW   +G  IDQI ++++ L+ 
Sbjct: 82  FLRGDTNVKYLQDNGCKIWDEWADENGDLGPVYGKQWRSWATPNGQSIDQIQNLIEGLKT 141

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRRHIVSAWN A ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 142 NPNSRRHIVSAWNPADVEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASY 201

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT+M+A V+G + GEF+HT GD HLY NH +QA  QL R P+  P + +  N  DL +
Sbjct: 202 ALLTLMVAQVVGLKPGEFVHTFGDAHLYMNHLDQAREQLQREPKPFPTLKMA-NKRDLFA 260

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           F Y DF L  YE H  I A V+V
Sbjct: 261 FEYADFQLEGYEAHPHIKAAVAV 283


>gi|332527154|ref|ZP_08403229.1| thymidylate synthase [Rubrivivax benzoatilyticus JA2]
 gi|332111580|gb|EGJ11562.1| thymidylate synthase [Rubrivivax benzoatilyticus JA2]
          Length = 273

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 159/262 (60%), Positives = 192/262 (73%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT+S FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF
Sbjct: 12  QYEDFMRHVDTTGVHKSDRTGTGTKSVFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD N  +L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  +DQI+  V+ L+ D
Sbjct: 72  LRGDGNARWLQERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHVDQIAEAVRLLKTD 131

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNVA + KMAL PCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 132 PDSRRIVVSAWNVAELPKMALMPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIASYA 191

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLTMM+A     Q G+FI T GD HLY+NH EQ   QL+R+P   P M I      +  +
Sbjct: 192 LLTMMMAQQCDLQLGDFIWTGGDCHLYSNHAEQVRTQLARTPFPYPTMEIRRRPASIFDY 251

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YEDF L  Y+ H AI A V+V
Sbjct: 252 EYEDFVLHDYQHHPAIKAPVAV 273


>gi|254780956|ref|YP_003065369.1| thymidylate synthase [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040633|gb|ACT57429.1| thymidylate synthase [Candidatus Liberibacter asiaticus str. psy62]
          Length = 264

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 264/264 (100%), Positives = 264/264 (100%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL
Sbjct: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR
Sbjct: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS
Sbjct: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL
Sbjct: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFRYEDFTLRSYEPHAAILAKVSV
Sbjct: 241 SFRYEDFTLRSYEPHAAILAKVSV 264


>gi|111019241|ref|YP_702213.1| thymidylate synthase [Rhodococcus jostii RHA1]
 gi|123046371|sp|Q0SEI1|TYSY_RHOSR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|110818771|gb|ABG94055.1| thymidylate synthase [Rhodococcus jostii RHA1]
          Length = 266

 Score =  381 bits (978), Expect = e-104,   Method: Composition-based stats.
 Identities = 154/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GT+S FG+QMR++L+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 7   YEDLLRLVMDTGTPKADRTGTGTKSVFGHQMRWNLADGFPLITTKKVHLKSIVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +GV+IWDEWAD DGELGP+YGVQWRSWP   G  IDQI+  +++L+++P
Sbjct: 67  RGDSNVKWLQDNGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITQTIETLKSNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGDIPQMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G + G+FI T GD H+Y+NH +Q   QLSR P   P + +N     +  + 
Sbjct: 187 LTHMVAQQAGLEPGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLN-KRESIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y  H AI A V+V
Sbjct: 246 FEDVEIVDYRHHPAIKAPVAV 266


>gi|325676379|ref|ZP_08156058.1| thymidylate synthase [Rhodococcus equi ATCC 33707]
 gi|325552940|gb|EGD22623.1| thymidylate synthase [Rhodococcus equi ATCC 33707]
          Length = 264

 Score =  381 bits (978), Expect = e-104,   Method: Composition-based stats.
 Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR+DL++GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 5   YEDLLRLVMDTGTAKADRTGTGTRSVFGHQMRWDLAEGFPLITTKKVHLKSIVYELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  HGV+IWDEWAD DGELGP+YGVQWRSWP   G  IDQI+ +V++L+ +P
Sbjct: 65  RGESNVKWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPSGEHIDQITKVVETLKTNP 124

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNVA +D MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 125 DSRRIIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 184

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A     + G+FI T GD H+Y+NH +Q   QLSR P   P + +N     +  + 
Sbjct: 185 LTHMVAQQADLEVGDFIWTGGDCHIYDNHVDQVTEQLSREPLPYPTLKLN-KRDSIFDYT 243

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y  H AI A V+V
Sbjct: 244 FEDVEIVDYRHHPAIKAPVAV 264


>gi|89901757|ref|YP_524228.1| thymidylate synthase [Rhodoferax ferrireducens T118]
 gi|122996836|sp|Q21U56|TYSY_RHOFD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|89346494|gb|ABD70697.1| thymidylate synthase [Rhodoferax ferrireducens T118]
          Length = 277

 Score =  380 bits (977), Expect = e-104,   Method: Composition-based stats.
 Identities = 160/269 (59%), Positives = 190/269 (70%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D LRHV   G  + DRTG GT S FGYQMRFDL++GFPL+TTKKV  K++V ELLWF
Sbjct: 9   QYEDFLRHVSTHGVFKADRTGTGTTSVFGYQMRFDLNEGFPLVTTKKVFLKAIVLELLWF 68

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L   G +IWDEWA  DG+LGP+YGVQWRSWP  DG  IDQI+  +++L+ +
Sbjct: 69  LRGDSNVKWLQERGCTIWDEWARPDGDLGPVYGVQWRSWPTPDGGHIDQIAEAIKTLKTN 128

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA +DKMAL PCH  FQFYV         GKLSCQLYQRS D+FLG+P
Sbjct: 129 PDSRRIIVSAWNVAELDKMALMPCHAFFQFYVAPAQTPGGKGKLSCQLYQRSADIFLGVP 188

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A       G+FI T GD H+Y+NH EQ  LQLSR+P   P + I   
Sbjct: 189 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHVYSNHAEQVALQLSRTPFAYPTLSIKRK 248

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  + YEDF +  YE H AI A V+V
Sbjct: 249 PASIFDYAYEDFEVLGYECHPAIKAPVAV 277


>gi|240850869|ref|YP_002972269.1| thymidylate synthase ThyA [Bartonella grahamii as4aup]
 gi|240267992|gb|ACS51580.1| thymidylate synthase ThyA [Bartonella grahamii as4aup]
          Length = 264

 Score =  380 bits (977), Expect = e-104,   Method: Composition-based stats.
 Identities = 179/264 (67%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTGVGTRS FGYQMRFDL  GFPLLTTKK+H +S+++ELL
Sbjct: 1   MKIYLDLLSHVLNNGIDRTDRTGVGTRSIFGYQMRFDLQAGFPLLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+++L  HGVSIWDEWAD+ G LGPIYG QWRSWP  DG  IDQIS ++  ++
Sbjct: 61  WFLRGDTNIAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPAPDGRHIDQISHLLTMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN ALI++MALPPCHC FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ETPDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V G + G+FIHTLGD HLY+NHFEQA  QLSR P  LP M+IN  + DL 
Sbjct: 181 YALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRIPNALPLMLINSAVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF++EDF L +YE    I A V+V
Sbjct: 241 SFKFEDFELLNYEAQPHIKAPVAV 264


>gi|110835205|ref|YP_694064.1| thymidylate synthase [Alcanivorax borkumensis SK2]
 gi|123345289|sp|Q0VM06|TYSY_ALCBS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|110648316|emb|CAL17792.1| thyA [Alcanivorax borkumensis SK2]
          Length = 277

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 166/277 (59%), Positives = 212/277 (76%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV + G+ + DRTG GT + FGYQMR+DLS+GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLRHVREHGTYKEDRTGTGTYAVFGYQMRYDLSQGFPMLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWD WA  +GELGP+YG QWRSW   DG VIDQI+ +++ ++
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDGWATPEGELGPVYGEQWRSWKTADGGVIDQITEVLKEIK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN A++              K ALPPCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 RNPDSRRLVVSAWNPAVLPDPSISPDANAAAGKQALPPCHCLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GD+FLG+PFNIASY+LLT+M+A V   Q G+F+HTLGD HLY+NH EQAD QL+R+P  L
Sbjct: 181 GDIFLGVPFNIASYALLTLMMAQVCDLQPGDFVHTLGDAHLYSNHLEQADTQLARTPGPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +F ++DFT+ +Y P A I A V++
Sbjct: 241 PTMTLNPAVKDLFAFTFDDFTVSNYNPDAHIKAPVAI 277


>gi|323356765|ref|YP_004223161.1| thymidylate synthase [Microbacterium testaceum StLB037]
 gi|323273136|dbj|BAJ73281.1| thymidylate synthase [Microbacterium testaceum StLB037]
          Length = 269

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 153/261 (58%), Positives = 191/261 (73%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G  + DRTG GT S FG Q+RFDL++GFPL+TTK+VH KS+V+ELLWFL
Sbjct: 9   YEDLLRDVLETGVHKSDRTGTGTTSVFGRQIRFDLAEGFPLITTKRVHLKSIVYELLWFL 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  +GV+IWDEWAD +GELGP+YGVQWRSWP  DG  IDQIS +++ +R DP
Sbjct: 69  RGESNVGWLKDNGVTIWDEWADGEGELGPVYGVQWRSWPTADGGTIDQISQVIEQIRRDP 128

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWN A I  MAL PCH LFQFYV  GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 129 DSRRLIVSAWNPADIPDMALAPCHALFQFYVAEGKLSCQLYQRSADMFLGVPFNIASYAL 188

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT+M+A   G + G+F+ T GD H+Y+NH EQ   QL+R P   P +        +  + 
Sbjct: 189 LTLMVAQQTGLEPGDFVWTGGDCHVYDNHREQVQEQLTREPYPYPTLRFARTPESIFDYT 248

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y+D  +  Y+ H AI   V+V
Sbjct: 249 YDDILVEDYQHHPAIRGAVAV 269


>gi|323137414|ref|ZP_08072492.1| thymidylate synthase [Methylocystis sp. ATCC 49242]
 gi|322397401|gb|EFX99924.1| thymidylate synthase [Methylocystis sp. ATCC 49242]
          Length = 268

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 159/268 (59%), Positives = 205/268 (76%), Gaps = 4/268 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +++ G  + DRTG GT S FG+QMRFDL++GFPL+TTK+VH KS++HELL
Sbjct: 1   MRQYLDLLDKILREGVRKEDRTGTGTLSIFGHQMRFDLAQGFPLVTTKRVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  +GV+IWDEWAD+ G+LGP+YG QWR+WP   G  IDQIS +V+ ++
Sbjct: 61  WFLRGDTNIAYLRENGVTIWDEWADESGDLGPVYGRQWRAWPTPGGETIDQISWLVEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN----GKLSCQLYQRSGDVFLGIPF 176
             P+SRR IVSAWNVA ID+MAL PCHCLFQF+V       +LSCQLYQRS DVFLG+PF
Sbjct: 121 KSPFSRRLIVSAWNVAEIDRMALAPCHCLFQFHVAEIDGQKRLSCQLYQRSADVFLGVPF 180

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           N+ASY+LLT M+A V G   G+F+H+ GD HLY NH EQA  QL+R P+ LP++ +NP+I
Sbjct: 181 NVASYALLTQMVAQVTGCVPGDFVHSFGDAHLYLNHLEQARTQLAREPKPLPRLRLNPSI 240

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  F+YED  +  YE   A+ A ++V
Sbjct: 241 TSLFDFKYEDIAIEGYESWPALAAPIAV 268


>gi|145346608|ref|XP_001417778.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578006|gb|ABO96071.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 499

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 132/283 (46%), Positives = 186/283 (65%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++R +I  G+ + DRTG GT STFG QMRFDL + FPLLTTK+V W+ V  ELLW
Sbjct: 217 YQYLEMIREIIDQGAVKGDRTGTGTISTFGNQMRFDLRRSFPLLTTKRVFWRGVAEELLW 276

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G++N + L    ++IWD    ++            G+LGP+YG QWR +        
Sbjct: 277 FVAGETNANKLAEKKINIWDGNGSREYLDSIGLTEREVGDLGPVYGFQWRHFGAEYTNMH 336

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++ +P  RR +++AWN A + +MALPPCH   QFYV NG+LSC
Sbjct: 337 ADYTGKGVDQLAEVIHKIKNNPNDRRILLTAWNPAALKEMALPPCHMFCQFYVANGELSC 396

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H  GD H+Y+NH E  + QL+
Sbjct: 397 QMYQRSCDMGLGVPFNIASYSLLTCMIAQVCGLKPGDFVHCCGDTHVYSNHVEPLEKQLA 456

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             PR  P + INP   D+ SF ++DF +  Y+PH  I  K++V
Sbjct: 457 CEPRPFPILKINPEKKDIDSFTFDDFEIVGYDPHPKIEMKMAV 499


>gi|119961084|ref|YP_948699.1| thymidylate synthase [Arthrobacter aurescens TC1]
 gi|171704616|sp|A1R8Y7|TYSY_ARTAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119947943|gb|ABM06854.1| thymidylate synthase [Arthrobacter aurescens TC1]
          Length = 267

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 158/261 (60%), Positives = 193/261 (73%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YEDLLRDVMANGTHKSDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVAVELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV ++   GVSIWDEWAD DGELGP+YGVQWRSWP  DG  IDQIS ++ +L A+P
Sbjct: 67  RGDSNVKWMQDQGVSIWDEWADADGELGPVYGVQWRSWPTPDGGHIDQISELMTNLAANP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHIVSAWNV+ +  MALPPCH  FQFYV +GKLSCQLYQRS D FLG+PFNIASY+L
Sbjct: 127 DSRRHIVSAWNVSELKDMALPPCHAFFQFYVADGKLSCQLYQRSADTFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A  +G + GEF+ T GDVH+Y+NH +Q   QLSR P   PQ+ I      +  + 
Sbjct: 187 LTRMVAQQLGLEPGEFVWTGGDVHVYDNHVDQVAEQLSREPYEYPQLKILRKPDSIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            +DF +  Y  H  I A ++V
Sbjct: 247 LDDFEVVDYRHHPTIKAPIAV 267


>gi|83858879|ref|ZP_00952401.1| thymidylate synthase [Oceanicaulis alexandrii HTCC2633]
 gi|83853702|gb|EAP91554.1| thymidylate synthase [Oceanicaulis alexandrii HTCC2633]
          Length = 279

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 156/261 (59%), Positives = 195/261 (74%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDLL  +++ G D+ DRTG GTR  FG Q+R DLS GFPLLTTKKVH+KS+  ELLWF+
Sbjct: 19  YLDLLHEIMETGEDQTDRTGTGTRGVFGRQIRCDLSDGFPLLTTKKVHFKSIAVELLWFI 78

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G +NV +L   GVSIWDEWAD++GELGP+YG QWR W   DG  IDQ++ +++ +R  P
Sbjct: 79  KGITNVKWLQERGVSIWDEWADENGELGPVYGKQWRRWEGPDGREIDQLAGLIEQIRQSP 138

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHI+SAWN A +  MALPPCH LFQF V  G+L  QLYQRS D+FLG+PFNIASY+L
Sbjct: 139 DSRRHIISAWNPADVPSMALPPCHTLFQFKVLGGRLHLQLYQRSADMFLGVPFNIASYAL 198

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           L  M+A   G++ GE++HT GD H+Y+NHF+Q   QLSR PR LP + +NP I DL +F 
Sbjct: 199 LLAMVAQATGYEPGEYVHTFGDAHIYSNHFDQVREQLSRDPRPLPTLKLNPEITDLFAFE 258

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED TL  Y+PHA I A V+V
Sbjct: 259 YEDITLEGYDPHARISAPVAV 279


>gi|300785995|ref|YP_003766286.1| thymidylate synthase [Amycolatopsis mediterranei U32]
 gi|299795509|gb|ADJ45884.1| thymidylate synthase [Amycolatopsis mediterranei U32]
          Length = 265

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 156/262 (59%), Positives = 203/262 (77%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLRHV+  G+ + DRTG GTRS FG+Q+R+ LS+GFPL+TTKKVH++S+ +ELLWF
Sbjct: 5   QYEDLLRHVLDTGARKGDRTGTGTRSIFGHQLRYRLSEGFPLITTKKVHFRSIAYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD+NVS+L  HGV+IWDEWA +DG+LGP+YGVQWRSWP  DG  +DQI+ ++++LR +
Sbjct: 65  LRGDANVSWLREHGVTIWDEWAAEDGDLGPVYGVQWRSWPTPDGGHVDQIAEVLRTLREN 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA I +MALPPCH  FQF+V +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRIIVSAWNVADIPRMALPPCHAFFQFHVADGKLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT ++A+ +G   G+FI T GD H+Y+NH +Q   QL+R  R  P + + P    L  +
Sbjct: 185 LLTHLIAAQVGLGVGDFIWTGGDCHIYDNHVDQVRTQLAREARPFPTLGLKPA-DSLFEY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YE F++  Y+PH  I A V+V
Sbjct: 244 TYEHFSVEGYDPHPGIKAPVAV 265


>gi|302532527|ref|ZP_07284869.1| thymidylate synthase [Streptomyces sp. C]
 gi|302441422|gb|EFL13238.1| thymidylate synthase [Streptomyces sp. C]
          Length = 265

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 161/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLRHV+  G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH KS+V+ELLWF
Sbjct: 5   QYEDLLRHVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLKSIVYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  HGV+IWDEWAD DGELGP+YGVQWRSWP  DG  +DQI+ ++ +LR D
Sbjct: 65  LRGDSNVGWLQEHGVTIWDEWADADGELGPVYGVQWRSWPTPDGRHVDQITEVLDTLRRD 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV+ + +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRMIVSAWNVSELSRMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A   G + G+FI T GD H+Y+NH EQ   QLSR+P   P++ +      L  +
Sbjct: 185 LLTHMVAQQTGLEPGDFIWTGGDCHIYDNHVEQVTEQLSRTPYEFPRLNL-RQADSLFDY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            Y D  +  Y  H AI A V+V
Sbjct: 244 AYSDVEVLDYRHHPAIKAPVAV 265


>gi|260063783|ref|YP_003196863.1| thymidylate synthase [Robiginitalea biformata HTCC2501]
 gi|88783228|gb|EAR14401.1| thymidylate synthase [Robiginitalea biformata HTCC2501]
          Length = 274

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 168/277 (60%), Positives = 212/277 (76%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLRHV+K G ++ DRTG GT S FGYQMRFDLS+GFPL+TTKK+H KSV+HELL
Sbjct: 1   MKQYHDLLRHVLKEGLEKTDRTGTGTVSVFGYQMRFDLSEGFPLVTTKKIHVKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N++YL  +GV IW+EWAD++G+LGP+YG QWR+W   +   +DQI+ +V+++R
Sbjct: 61  WFLRGDTNIAYLKENGVRIWNEWADENGDLGPVYGHQWRNW---NSEGLDQIAQVVETIR 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +V+AWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPDSRRMLVAAWNPSVLPDTSRTFAENVADGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLT+M+A V   Q GEFIHT GD H+YNNH EQ  LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALLTLMVAQVCNLQPGEFIHTFGDAHIYNNHREQIRLQLSREPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +FRYEDFTL +Y+PH  I  +V+V
Sbjct: 238 PTMELNPEVTDLFAFRYEDFTLHNYDPHPLIRGRVAV 274


>gi|332994533|gb|AEF04588.1| thymidylate synthase [Alteromonas sp. SN2]
          Length = 277

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 162/277 (58%), Positives = 204/277 (73%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL L+RHV   G  + DRTG GT S FGYQMRFDL +GFPL+TTKK H KS++HELL
Sbjct: 1   MKEYLALMRHVRDTGVKKEDRTGTGTLSVFGYQMRFDLQQGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G+SN++YL  +GVSIWD WA ++GELGP+YG QWRSW + DG  IDQI+ +++ ++
Sbjct: 61  WFLKGESNIAYLKENGVSIWDGWATEEGELGPVYGKQWRSWDNGDGTTIDQIADVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH +FQFYV +GKLSCQLYQRS
Sbjct: 121 TNPDSRRLIVSAWNPSVLPDTQYSPRENASMGKQALPPCHTMFQFYVLDGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GD+FLGIPFNIASY+LLTMM+A V   + G+FI TLGD HLY+NH EQ DLQLSR P   
Sbjct: 181 GDIFLGIPFNIASYALLTMMIAQVCDLEPGDFILTLGDAHLYSNHLEQVDLQLSREPFAP 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +N ++ D+  F +EDFTL+ Y  H  I A V++
Sbjct: 241 PVMELNKSVKDIFDFSFEDFTLKGYHSHPHIKAPVAI 277


>gi|289163528|ref|YP_003453666.1| Thymidylate synthase [Legionella longbeachae NSW150]
 gi|288856701|emb|CBJ10512.1| Thymidylate synthase [Legionella longbeachae NSW150]
          Length = 264

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 157/264 (59%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL H++K G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H +S+VHELL
Sbjct: 1   MKTYLNLLEHILKNGTRKTDRTGTGTLSIFGYQMRFDLSQGFPLLTTKKLHTRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N++YL+ +GV+IWDEWAD +G+LGPIYG QWRSWP  DG  IDQ++ +VQ ++
Sbjct: 61  WFLSGNTNIAYLNENGVTIWDEWADSNGDLGPIYGKQWRSWPTSDGRTIDQLNEVVQEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR +VSAWNV  +++MAL PCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 SNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNILSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A     Q G+FI T GD HLY NH EQA  QL+R P  L  + I      L 
Sbjct: 181 YSLLTHMVAEQCNLQVGDFIWTGGDCHLYLNHLEQARTQLTREPLPLATLNIKRKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF   +Y+ H AI A ++V
Sbjct: 241 EYTFDDFEFLNYQSHPAIKAPIAV 264


>gi|256824789|ref|YP_003148749.1| thymidylate synthase [Kytococcus sedentarius DSM 20547]
 gi|256688182|gb|ACV05984.1| thymidylate synthase [Kytococcus sedentarius DSM 20547]
          Length = 264

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 160/264 (60%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L  V++ G+   DRTG GT S FG Q R+DL+ GFPL+TTKKV+ + VV ELL
Sbjct: 1   MRQYLDWLTDVLENGTPTEDRTGTGTLSVFGRQTRYDLAAGFPLVTTKKVYRRGVVGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L    + IWDEWAD++G+LGP+YG QWRSWP  DG  +DQI+ +V+SLR
Sbjct: 61  WFLRGDTNVRWLQERKIHIWDEWADENGDLGPVYGAQWRSWPRPDGGTVDQIAKVVESLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A P SRRHIVSAWN A +D MALPPCH LFQF+V  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 AHPASRRHIVSAWNPAEVDDMALPPCHALFQFHVSGGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + GEF+HT+GD+HLY+NH EQA  QL+R PR LP++ +NP + +L 
Sbjct: 181 YALLTHMVAHVTDLEVGEFVHTVGDLHLYSNHLEQAREQLAREPRPLPRLELNPAVRELD 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D T   Y+PH AI A ++V
Sbjct: 241 AFDLDDVTFHGYDPHPAISAPIAV 264


>gi|221066060|ref|ZP_03542165.1| Thymidylate synthase [Comamonas testosteroni KF-1]
 gi|220711083|gb|EED66451.1| Thymidylate synthase [Comamonas testosteroni KF-1]
          Length = 276

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 161/263 (61%), Positives = 197/263 (74%), Gaps = 1/263 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY   +RHV + G+ + DRTG GTRS FGYQMRF+L++GFPL+TTKKVH KS++ ELLWF
Sbjct: 14  QYETFMRHVYEHGASKTDRTGTGTRSVFGYQMRFNLNEGFPLVTTKKVHLKSIILELLWF 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           LRGDSNV +L   G +IWDEWADK  G+LGP+YGVQWRSWP  DG  +DQI+ +V+ L++
Sbjct: 74  LRGDSNVKWLQERGCTIWDEWADKQTGDLGPVYGVQWRSWPKADGTHVDQIAEVVKQLQS 133

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR IVSAWNVA +D+MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY
Sbjct: 134 NPDSRRIIVSAWNVAELDQMALMPCHSFFQFYVADGKLSCQLYQRSADIFLGVPFNIASY 193

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA   G + G+FI T GD H+YNNHFEQ   QLSR P   P + I      +  
Sbjct: 194 ALLTHMLAQQCGLEVGDFIWTGGDCHIYNNHFEQVQTQLSRQPFAYPTLNIKRKPDSIFG 253

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + YEDF +  Y+ HA I A V+V
Sbjct: 254 YEYEDFEVLDYQHHAGIKAPVAV 276


>gi|319953673|ref|YP_004164940.1| thymidylate synthase [Cellulophaga algicola DSM 14237]
 gi|319422333|gb|ADV49442.1| thymidylate synthase [Cellulophaga algicola DSM 14237]
          Length = 274

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 155/277 (55%), Positives = 209/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+HV++ G+ + DRTG GT+S FGYQMRFDLSKGFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLLQHVLETGNQKGDRTGTGTKSVFGYQMRFDLSKGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW++WAD++G+LGP+YG QWR+W   +   IDQI   V++L+
Sbjct: 61  WFLKGDTNIDYLKENGVRIWNDWADENGDLGPVYGHQWRNW---NSEEIDQIKDAVETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR ++SAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLISAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A   G++ G+FIHT GD H+YNNH +Q +LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQACGYEAGDFIHTFGDAHIYNNHMDQVELQLSRDPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M++NP + ++  F++EDFTL  Y PH  I   V++
Sbjct: 238 PKMVLNPEVKNIFDFKFEDFTLVDYNPHPHIKGVVAI 274


>gi|172057750|ref|YP_001814210.1| thymidylate synthase [Exiguobacterium sibiricum 255-15]
 gi|171990271|gb|ACB61193.1| Thymidylate synthase [Exiguobacterium sibiricum 255-15]
          Length = 264

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/264 (53%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L + ++  G  + DRTG GT S FG+QMRF L  GFP++TTKK+H KS++HEL+
Sbjct: 1   MKQYHQLCQEILTNGVKKEDRTGTGTISIFGHQMRFSLQDGFPMVTTKKLHMKSIIHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ G++N+SYL  +GV IW+EWAD++G LGP+YG QWRS+P  DG  +DQ++ +++ ++
Sbjct: 61  WFISGETNISYLQENGVRIWNEWADENGNLGPVYGAQWRSFPKPDGTTVDQLADVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN   +++MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 VNPDSRRLIVSAWNPGQLEEMALPPCHLLFQFYVADGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V   + G+F+HTLGD H+Y+NH +Q +LQLSR+P+ LP +     +  + 
Sbjct: 181 YALLTHMIAHVCKLEVGDFVHTLGDSHIYSNHLDQVNLQLSRNPKPLPTIRFAREVERIE 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++D  +  Y+P   I   V+V
Sbjct: 241 DFTFDDIIIEGYDPDPHIKGVVAV 264


>gi|270158215|ref|ZP_06186872.1| thymidylate synthase [Legionella longbeachae D-4968]
 gi|269990240|gb|EEZ96494.1| thymidylate synthase [Legionella longbeachae D-4968]
          Length = 269

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 157/264 (59%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL H++K G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKK+H +S+VHELL
Sbjct: 6   MKTYLNLLEHILKNGTRKTDRTGTGTLSIFGYQMRFDLSQGFPLLTTKKLHTRSIVHELL 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G++N++YL+ +GV+IWDEWAD +G+LGPIYG QWRSWP  DG  IDQ++ +VQ ++
Sbjct: 66  WFLSGNTNIAYLNENGVTIWDEWADSNGDLGPIYGKQWRSWPTSDGRTIDQLNEVVQEIK 125

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR +VSAWNV  +++MAL PCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 126 SNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNILSCQLYQRSADVFLGVPFNIAS 185

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A     Q G+FI T GD HLY NH EQA  QL+R P  L  + I      L 
Sbjct: 186 YSLLTHMVAEQCNLQVGDFIWTGGDCHLYLNHLEQARTQLTREPLPLATLNIKRKPQSLF 245

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + ++DF   +Y+ H AI A ++V
Sbjct: 246 EYTFDDFEFLNYQSHPAIKAPIAV 269


>gi|217976787|ref|YP_002360934.1| Thymidylate synthase [Methylocella silvestris BL2]
 gi|254790244|sp|B8ELI3|TYSY_METSB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|217502163|gb|ACK49572.1| Thymidylate synthase [Methylocella silvestris BL2]
          Length = 269

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 159/269 (59%), Positives = 198/269 (73%), Gaps = 5/269 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+  +++ G  + DRTG GT S FGYQMRFDL  GFPL+TTKK+HWKS+VHEL+
Sbjct: 1   MQAYLDLIDKILREGVRKPDRTGTGTLSIFGYQMRFDLGAGFPLVTTKKLHWKSIVHELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  +GV IWDEWAD  G+LGP+YG QWRSW   DG  IDQI++++  ++
Sbjct: 61  WFLRGDTNIGYLKDNGVGIWDEWADDSGDLGPVYGRQWRSWQAPDGRTIDQIANVIDEIQ 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-----GKLSCQLYQRSGDVFLGIP 175
            DP+SRR +VSAWN A +  MAL PCHCLFQF V +      +L  QLYQRSGD FLG P
Sbjct: 121 RDPFSRRLLVSAWNPADLPAMALAPCHCLFQFNVRDDSTGTRRLDLQLYQRSGDAFLGAP 180

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT ++ASV G   G+F+HT GD HLY NH +QA LQLSR PR LP++ IN N
Sbjct: 181 FNIASYALLTELVASVCGLTPGDFVHTFGDAHLYLNHIDQAKLQLSRDPRPLPRLRINGN 240

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  L   R+ED +L +Y+PH  I A V+V
Sbjct: 241 VKSLFDIRFEDLSLENYDPHPVIKAPVAV 269


>gi|213962407|ref|ZP_03390670.1| thymidylate synthase [Capnocytophaga sputigena Capno]
 gi|213955073|gb|EEB66392.1| thymidylate synthase [Capnocytophaga sputigena Capno]
          Length = 274

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 171/277 (61%), Positives = 210/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLRH+++ G  + DRTG GT S FGYQMRFDLSKGFPL+TTKK+H KSV++ELL
Sbjct: 1   MKVYHDLLRHILENGYSKDDRTGTGTTSVFGYQMRFDLSKGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGV IW+EWAD++G+LGP+YG QWR+W   +G  IDQI  ++++L+
Sbjct: 61  WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRNW---NGEAIDQIKMVIETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 118 HNPESRRIIVSAWNPSVLPDTGKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLTMMLA V   Q G+F+HT GDVH+YNNH EQ  LQLSR PR L
Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQVGDFVHTFGDVHIYNNHREQVALQLSRIPREL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +F YEDF L  Y+P+ AI A+VSV
Sbjct: 238 PTMHLNPAVKDLFAFDYEDFRLEGYDPYPAIKAQVSV 274


>gi|114331021|ref|YP_747243.1| thymidylate synthase [Nitrosomonas eutropha C91]
 gi|122314079|sp|Q0AHA4|TYSY_NITEC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|114308035|gb|ABI59278.1| thymidylate synthase [Nitrosomonas eutropha C91]
          Length = 264

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 171/264 (64%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MH YLDL+RHV+++G  + DRTG GT S FGYQMRFDL +GFPL+TTK+ H KS++HELL
Sbjct: 1   MHPYLDLMRHVLQYGHKKTDRTGTGTLSIFGYQMRFDLQQGFPLVTTKQCHVKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL ++G+SIW+EWADK GELGP+YG QWRSW       IDQI+ ++Q ++
Sbjct: 61  WFLRGDTNIDYLKKNGISIWNEWADKSGELGPVYGHQWRSWTVSGDKSIDQIAQVIQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           A P SRR I+SAWNV  +DKMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ATPDSRRMIISAWNVGDLDKMALAPCHVLFQFYVVDGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT+M+A     + GEFIHT GD HLY NH EQA LQL+R P++LP M +NP I ++L
Sbjct: 181 YSLLTLMIAQCCNLKPGEFIHTFGDAHLYLNHLEQARLQLTREPKSLPIMELNPAIRNIL 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDFTL +Y+PH  I A V+V
Sbjct: 241 DFRYEDFTLHNYDPHPPIKAPVAV 264


>gi|303257367|ref|ZP_07343381.1| thymidylate synthase [Burkholderiales bacterium 1_1_47]
 gi|302860858|gb|EFL83935.1| thymidylate synthase [Burkholderiales bacterium 1_1_47]
          Length = 267

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 160/262 (61%), Positives = 196/262 (74%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY   +R V + G ++ DRTGVGTRS FGYQMRF+L +GFPL+TTKK+H +S++HELLWF
Sbjct: 6   QYETFMRDVFEHGVEKSDRTGVGTRSMFGYQMRFNLQEGFPLVTTKKLHLRSIIHELLWF 65

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L GDSNV YLH + V+IWDEWAD +G+LGPIYGVQWR W   DG  IDQIS+++  ++ +
Sbjct: 66  LHGDSNVKYLHDNKVTIWDEWADANGDLGPIYGVQWRHWKTSDGGYIDQISNLIHQIKTN 125

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNV  IDKMALPPCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIASYS
Sbjct: 126 PDSRRLVVSAWNVGEIDKMALPPCHMFFQFYVAQGKLSCQLYQRSCDIFLGVPFNIASYS 185

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A       G+FI T GD H+YNNHFEQ  LQLSR PR  P++II      +  +
Sbjct: 186 LLTHMIAQQCDLDVGDFIWTGGDCHIYNNHFEQVKLQLSREPRPYPKLIIKRRPDSIFDY 245

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            +EDF +  Y+P  AI A ++V
Sbjct: 246 NFEDFEIVDYDPWPAIKAPIAV 267


>gi|298209224|ref|YP_003717403.1| thymidylate synthase [Croceibacter atlanticus HTCC2559]
 gi|83849151|gb|EAP87020.1| thymidylate synthase [Croceibacter atlanticus HTCC2559]
          Length = 274

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 159/277 (57%), Positives = 208/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+RHV+K G  + DRTG GT+S FGYQMRF+LS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLMRHVLKAGVQKGDRTGTGTKSVFGYQMRFNLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWR+W   +   IDQI  I+ +L+
Sbjct: 61  WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGHQWRNW---NSEEIDQIKDIIDTLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV  GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLVSAWNPSVMPNTSESFSENVAKGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+YNNHFEQ +LQLSR  R L
Sbjct: 178 ADIFLGVPFNIASYALLTMMIAQVCGYEAGDFIHTFGDAHIYNNHFEQVELQLSRECRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M IN ++ D+  F+++DFTL +Y PH  I   V++
Sbjct: 238 PKMQINKDVKDIFGFKFDDFTLINYNPHPHIKGAVAI 274


>gi|119716538|ref|YP_923503.1| thymidylate synthase [Nocardioides sp. JS614]
 gi|166231720|sp|A1SJ31|TYSY_NOCSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119537199|gb|ABL81816.1| thymidylate synthase [Nocardioides sp. JS614]
          Length = 273

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 158/273 (57%), Positives = 201/273 (73%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+ V+  G  + DRTG GT S FG+QMRFDL  GFPL+TTKKVH +SV  ELL
Sbjct: 1   MRAYLDLLQRVVDEGVPKGDRTGTGTLSVFGHQMRFDLRAGFPLVTTKKVHTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L   G++IWDEWAD+ G+LGP+YG QWRSWP  DG  +DQI+ +V+ +R
Sbjct: 61  WFLRGDTNVKWLQDRGITIWDEWADEQGDLGPVYGYQWRSWPTPDGRHVDQIAQVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLYQRSGDVF 171
             P SRRH+VSAWNVA I  MAL PCH +FQFYV           G+LSCQLYQRS DVF
Sbjct: 121 DSPDSRRHVVSAWNVADIPDMALAPCHTMFQFYVAPPGPGEESGPGRLSCQLYQRSADVF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLT M+A V G + G+F+HTLGD HLY+NH +QA LQL+R PR LP+++
Sbjct: 181 LGVPFNIASYALLTHMVAQVTGLEVGDFVHTLGDAHLYSNHLDQARLQLTREPRPLPRLV 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           ++ ++ +L +F  E   +  Y+PH  I A ++V
Sbjct: 241 LDSSVTELDAFDLEHIAVEGYDPHPGIKAPIAV 273


>gi|327538952|gb|EGF25590.1| thymidylate synthase [Rhodopirellula baltica WH47]
          Length = 301

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL  V+  G DR DRTGVGTRS FG QMRFDL++GFPLLTTKK+H +S++HELL
Sbjct: 38  MQGYLQLLDEVLHDGIDRDDRTGVGTRSLFGRQMRFDLAEGFPLLTTKKLHIRSILHELL 97

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  + VSIWDEWAD+ G+LGP+YG QWRSW   +G+ +DQI+ +   +R
Sbjct: 98  WFLRGDTNIGYLKENKVSIWDEWADEAGDLGPVYGHQWRSWEGANGDTVDQIAWVENEIR 157

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + KMALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 158 TNPRSRRLVVSAWNVADVPKMALPPCHLLFQFYVSGGRLSCQLYQRSADLFLGVPFNIAS 217

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y++LT M+A V G + GEF+HTLGDVHLY+NHF+QA  QLSR+PR LP   I  ++  + 
Sbjct: 218 YAMLTSMMAHVTGLKPGEFVHTLGDVHLYSNHFDQAREQLSRTPRPLPTFHIKRDVASVT 277

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++DF L +Y+PH  I A V+V
Sbjct: 278 DFQFDDFELTNYDPHPHIKAPVAV 301


>gi|254495239|ref|ZP_05108163.1| Thymidylate synthase [Polaribacter sp. MED152]
 gi|85819592|gb|EAQ40749.1| Thymidylate synthase [Polaribacter sp. MED152]
          Length = 274

 Score =  377 bits (969), Expect = e-103,   Method: Composition-based stats.
 Identities = 155/277 (55%), Positives = 209/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+V+ELL
Sbjct: 1   MKQYHDLVKHVLENGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+NV YL  +GV IW+EWAD++G+LGP+YG QWR+W   +   +DQ+  ++ +L+
Sbjct: 61  WFIKGDTNVKYLQENGVRIWNEWADENGDLGPVYGHQWRNWNSDE---VDQLKEVIATLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
           ++P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 SNPNSRRMLVSAWNPSVLPDTSKSFSENVANGKAALPPCHAFFQFYVSDGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+YNNH EQ +LQLSR  R L
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYNNHVEQLELQLSRDIRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +N  I ++  F ++DF L+ Y PH  I  KV+V
Sbjct: 238 PKMKLNTAITNIEDFTFDDFELQDYNPHPHIKGKVAV 274


>gi|120610137|ref|YP_969815.1| thymidylate synthase [Acidovorax citrulli AAC00-1]
 gi|171769177|sp|A1TM53|TYSY_ACIAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120588601|gb|ABM32041.1| thymidylate synthase [Acidovorax citrulli AAC00-1]
          Length = 279

 Score =  377 bits (969), Expect = e-103,   Method: Composition-based stats.
 Identities = 163/269 (60%), Positives = 195/269 (72%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GTRS FGYQMRFDL++GFPL+TTKKVH KS++ ELLWF
Sbjct: 11  QYEDFMRHVYTHGVAKGDRTGTGTRSVFGYQMRFDLNEGFPLVTTKKVHLKSIITELLWF 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G S+  +L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS +V++LR  
Sbjct: 71  LTGSSSNHWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISQVVETLRTH 130

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA +DKMAL PCH  FQFYV         GKLSCQLYQRS D+FLG+P
Sbjct: 131 PDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPPQAAGERGKLSCQLYQRSADIFLGVP 190

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A     + G+FI T GD H+Y+NHFEQ +LQLSR+P   P + I   
Sbjct: 191 FNIASYALLTHMMAQQCNLEVGDFIWTGGDCHIYSNHFEQVELQLSRAPHPYPTLHILRR 250

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              L  +R+EDF +R Y  H AI A V+V
Sbjct: 251 PDSLFDYRFEDFEVRDYAHHPAIKAPVAV 279


>gi|32477613|ref|NP_870607.1| thymidylate synthase [Rhodopirellula baltica SH 1]
 gi|62901353|sp|Q7UID0|TYSY_RHOBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|32448167|emb|CAD77684.1| thymidylate synthase [Rhodopirellula baltica SH 1]
          Length = 264

 Score =  377 bits (969), Expect = e-103,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 206/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL  V+  G DR DRTGVGTRS FG QMRFDL++GFPLLTTKK+H +S++HELL
Sbjct: 1   MQGYLQLLDEVLHDGIDRDDRTGVGTRSLFGRQMRFDLAEGFPLLTTKKLHIRSILHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  + VSIWDEWAD+ G+LGP+YG QWRSW   +G+ +DQI+ +   +R
Sbjct: 61  WFLRGDTNIGYLKENKVSIWDEWADEAGDLGPVYGHQWRSWEGANGDTVDQIAWVENEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNVA + KMALPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TNPRSRRLVVSAWNVADVPKMALPPCHLLFQFYVSGGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y++LT M+A V G + GEF+HTLGDVHLY+NHF+QA  QLSR+PR LP   I  ++  + 
Sbjct: 181 YAMLTSMMAHVTGLKPGEFVHTLGDVHLYSNHFDQAREQLSRTPRPLPTFHIKRDVASVT 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+++DF L +Y+PH  I A V+V
Sbjct: 241 DFQFDDFELTNYDPHPHIKAPVAV 264


>gi|239918228|ref|YP_002957786.1| thymidylate synthase [Micrococcus luteus NCTC 2665]
 gi|289705051|ref|ZP_06501462.1| thymidylate synthase [Micrococcus luteus SK58]
 gi|239839435|gb|ACS31232.1| thymidylate synthase [Micrococcus luteus NCTC 2665]
 gi|289558214|gb|EFD51494.1| thymidylate synthase [Micrococcus luteus SK58]
          Length = 276

 Score =  377 bits (969), Expect = e-103,   Method: Composition-based stats.
 Identities = 156/267 (58%), Positives = 193/267 (72%), Gaps = 6/267 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  V+  G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV  ELLWFL
Sbjct: 10  YEDLLADVMAHGAVKTDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVALELLWFL 69

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQI+ +V+ +R +P
Sbjct: 70  RGDSNVRWLQERGVRIWNEWADEDGELGPVYGVQWRSWPTPDGGHIDQIAKVVEQIRTNP 129

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFN 177
            SRRHIV+AWN A +D+MALPPCH LFQFYV        G+LSCQLYQRS D+FLG+PFN
Sbjct: 130 DSRRHIVTAWNPAEVDEMALPPCHALFQFYVSPGQDGAPGRLSCQLYQRSADLFLGVPFN 189

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           IASY+LLT+M+A   G   GEF+ T GDVH+Y NH EQ   QLSR P   P++ +     
Sbjct: 190 IASYALLTVMVAQQTGLTPGEFVWTGGDVHIYANHEEQVREQLSREPYPYPRLRLRRTPA 249

Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +  + YEDF +  Y  H  I A ++V
Sbjct: 250 SIFDYDYEDFEVLDYRHHPTITAPIAV 276


>gi|330999206|ref|ZP_08322924.1| thymidylate synthase [Parasutterella excrementihominis YIT 11859]
 gi|329575272|gb|EGG56820.1| thymidylate synthase [Parasutterella excrementihominis YIT 11859]
          Length = 267

 Score =  377 bits (969), Expect = e-103,   Method: Composition-based stats.
 Identities = 159/262 (60%), Positives = 196/262 (74%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY   +R V + G ++ DRTGVGTRS FGYQMRF+L +GFPL+TTKK+H +S++HELLWF
Sbjct: 6   QYETFMRDVFEHGVEKSDRTGVGTRSMFGYQMRFNLQEGFPLVTTKKLHLRSIIHELLWF 65

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L GDSN+ YLH + V+IWDEWAD +G+LGPIYGVQWR W   DG  IDQIS+++  ++ +
Sbjct: 66  LHGDSNIKYLHDNKVTIWDEWADANGDLGPIYGVQWRHWKTSDGGYIDQISNLIHQIKTN 125

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNV  IDKMALPPCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIASYS
Sbjct: 126 PDSRRLVVSAWNVGEIDKMALPPCHMFFQFYVAQGKLSCQLYQRSCDIFLGVPFNIASYS 185

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A       G+FI T GD H+YNNHFEQ  LQLSR PR  P++II      +  +
Sbjct: 186 LLTHMIAQQCDLDVGDFIWTGGDCHIYNNHFEQVKLQLSREPRPYPKLIIKRRPDSIFDY 245

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            +EDF +  Y+P  AI A ++V
Sbjct: 246 NFEDFEIVDYDPWPAIKAPIAV 267


>gi|309812530|ref|ZP_07706278.1| thymidylate synthase [Dermacoccus sp. Ellin185]
 gi|308433508|gb|EFP57392.1| thymidylate synthase [Dermacoccus sp. Ellin185]
          Length = 264

 Score =  377 bits (969), Expect = e-103,   Method: Composition-based stats.
 Identities = 168/264 (63%), Positives = 210/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  LLR ++  G+ + DRTG GT S FG+QMRFDLS+GFP+LTTKK+H +S+  ELL
Sbjct: 1   MEQYHALLRRILDEGTRKDDRTGTGTLSVFGHQMRFDLSQGFPVLTTKKLHLRSIFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV++LH   +SIWDEWAD DG+LGPIYG QWRSWP  +G  IDQI+ +V+S+R
Sbjct: 61  WFLRGDTNVAWLHERKISIWDEWADPDGDLGPIYGHQWRSWPTPNGETIDQIARVVESVR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA +D MALPPCH +FQFYV +GKLSCQLYQRSGDVFLG+PFNIAS
Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHTMFQFYVADGKLSCQLYQRSGDVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A V G   G+F+HTLGD HLY NH +QA LQL+R+P+TLP +++NP++  L 
Sbjct: 181 YALLTHMVAQVTGLAVGDFVHTLGDAHLYVNHLDQARLQLTRTPKTLPTLVLNPDVTALD 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F  +D  L  YE   AI A+V+V
Sbjct: 241 AFELDDIRLDGYEADPAIKAQVAV 264


>gi|254419110|ref|ZP_05032834.1| thymidylate synthase [Brevundimonas sp. BAL3]
 gi|196185287|gb|EDX80263.1| thymidylate synthase [Brevundimonas sp. BAL3]
          Length = 307

 Score =  377 bits (969), Expect = e-103,   Method: Composition-based stats.
 Identities = 166/263 (63%), Positives = 199/263 (75%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+LLR ++  G  R DRTG GT   FG QMRFDLSKGFP+LTTKK+H +S++ ELLW
Sbjct: 46  RQYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPVLTTKKLHLRSIIVELLW 105

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRG++N+ +L  +GV IWDEWAD +GELGP+YG QWRSW   DG  IDQI  +V  L+ 
Sbjct: 106 FLRGETNIGWLKDNGVRIWDEWADAEGELGPVYGKQWRSWTAPDGRSIDQIEKLVHGLKT 165

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRRHIV+AWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 166 NPNSRRHIVTAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASY 225

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT+MLA V+G + G+F+HT GD HLY NH EQA+LQL+R P  LP M I P   DL +
Sbjct: 226 ALLTLMLAQVVGLEPGDFVHTFGDAHLYLNHLEQAELQLTREPLPLPVMHIAPK-TDLFA 284

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           F   DFTL  YE    I A V+V
Sbjct: 285 FELSDFTLEGYEAWPHIKAAVAV 307


>gi|281415580|ref|ZP_06247322.1| thymidylate synthase [Micrococcus luteus NCTC 2665]
          Length = 273

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 156/267 (58%), Positives = 193/267 (72%), Gaps = 6/267 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  V+  G+ + DRTG GTRS FG Q+RFDL++ FPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YEDLLADVMAHGAVKTDRTGTGTRSVFGRQLRFDLAESFPLITTKRVHFKSVALELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQI+ +V+ +R +P
Sbjct: 67  RGDSNVRWLQERGVRIWNEWADEDGELGPVYGVQWRSWPTPDGGHIDQIAKVVEQIRTNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFN 177
            SRRHIV+AWN A +D+MALPPCH LFQFYV        G+LSCQLYQRS D+FLG+PFN
Sbjct: 127 DSRRHIVTAWNPAEVDEMALPPCHALFQFYVSPGQDGAPGRLSCQLYQRSADLFLGVPFN 186

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           IASY+LLT+M+A   G   GEF+ T GDVH+Y NH EQ   QLSR P   P++ +     
Sbjct: 187 IASYALLTVMVAQQTGLTPGEFVWTGGDVHIYANHEEQVREQLSREPYPYPRLRLRRTPA 246

Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +  + YEDF +  Y  H  I A ++V
Sbjct: 247 SIFDYDYEDFEVLDYRHHPTITAPIAV 273


>gi|223937832|ref|ZP_03629732.1| Thymidylate synthase [bacterium Ellin514]
 gi|223893438|gb|EEF59899.1| Thymidylate synthase [bacterium Ellin514]
          Length = 264

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  LL+ V++ G  + DRTG GT + FG Q RF L+ GFP++TTKK+H KS+++ELL
Sbjct: 1   MIQYHQLLKLVLEQGKFKPDRTGTGTYAVFGAQARFPLADGFPVVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YL+ +GV+IWDEWAD +G LG +YG QW  W   DG  I+QI  ++  ++
Sbjct: 61  WFLRGDTNVKYLNENGVTIWDEWADTEGNLGRVYGAQWCDWRTADGRSINQIDEVIAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRRHIVSAWNV  I++MALPPCH LFQF+V +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KTPDSRRHIVSAWNVGEIERMALPPCHALFQFFVQDGELSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   + G F+HT GD+HLY+NH EQA LQLSR P+ LPQM +NP I ++ 
Sbjct: 181 YALLTMMVAQVCDLKPGTFVHTFGDLHLYSNHLEQAKLQLSREPKQLPQMKLNPAIKNIH 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF L  Y+PH  I A ++V
Sbjct: 241 EFKFEDFQLAGYDPHPGIKAPIAV 264


>gi|209363794|ref|YP_001423860.2| thymidylate synthase [Coxiella burnetii Dugway 5J108-111]
 gi|207081727|gb|ABS77420.2| thymidylate synthase [Coxiella burnetii Dugway 5J108-111]
          Length = 296

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 149/264 (56%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+ ++  G  + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL
Sbjct: 33  MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 92

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W   DG  +DQ+  +++ ++
Sbjct: 93  WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 152

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS
Sbjct: 153 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 212

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A     + GEFI + GD H+YN H +Q   QLSR PR LPQ+IIN +   L 
Sbjct: 213 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 272

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + + DF++ +Y PH AI A V+V
Sbjct: 273 DYNFNDFSIVNYHPHPAIKAPVAV 296


>gi|296118294|ref|ZP_06836875.1| thymidylate synthase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968852|gb|EFG82096.1| thymidylate synthase [Corynebacterium ammoniagenes DSM 20306]
          Length = 270

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 150/261 (57%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL+ V++ G+++ DRTG GTRS FG+Q+R+DL++ FPLLTTKKV++  V+ ELLWFL
Sbjct: 11  YEELLKKVLETGAEKSDRTGTGTRSLFGHQLRYDLNESFPLLTTKKVYFHGVIGELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNVS+L  + + IW+EWAD +GELGP+YGVQWRSWP  DG  IDQI +++  L+ +P
Sbjct: 71  RGESNVSWLQENKIRIWNEWADANGELGPVYGVQWRSWPTPDGQHIDQIETVMDQLKNNP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +DKMAL PCH LFQ YV  GKLS Q+YQRS D+FLG+PFNIASY+ 
Sbjct: 131 DSRRILVSAWNVSELDKMALMPCHLLFQLYVAEGKLSMQVYQRSADMFLGVPFNIASYAA 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GE I T GDVH+YNNH EQ   QL+R+PR  PQ+ +N     +  + 
Sbjct: 191 LTHMFAQQAGLEVGELIWTGGDVHIYNNHIEQVKEQLARTPRAYPQLKLN-KAKSIFDYN 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++DF L  Y+PH  I A VSV
Sbjct: 250 FDDFELEGYDPHPTIKAPVSV 270


>gi|38233422|ref|NP_939189.1| thymidylate synthase [Corynebacterium diphtheriae NCTC 13129]
 gi|62901324|sp|Q6NIF2|TYSY_CORDI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|38199682|emb|CAE49341.1| thymidylate synthase [Corynebacterium diphtheriae]
          Length = 270

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 154/261 (59%), Positives = 194/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ GS + DRTG GT S FG QMRFDL++ FPL+TTKKV+WK V+ ELLWFL
Sbjct: 11  YEDLLRTILEQGSHKDDRTGTGTTSLFGQQMRFDLTEAFPLITTKKVYWKGVIGELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G SNV +L +  + IWDEWA ++GELGP+YGVQWRSWP  DG  +DQI+  +  L+ +P
Sbjct: 71  QGSSNVRWLQKRNIHIWDEWASEEGELGPVYGVQWRSWPTPDGQHVDQIAQALDILKNNP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNVA ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYS 
Sbjct: 131 DSRRNIVSAWNVADLNNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSA 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA   G + GEFI T GD H+Y+NH EQ   QLSR PR  PQ+ +      +  + 
Sbjct: 191 LTHMLAQQAGLKVGEFIWTGGDCHIYDNHREQVLTQLSREPRPYPQLTL-RKASSIFDYD 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++DFT+  Y+PH AI  +V+V
Sbjct: 250 FDDFTIEGYDPHPAIRGEVAV 270


>gi|310287943|ref|YP_003939202.1| Thymidylate synthase [Bifidobacterium bifidum S17]
 gi|309251880|gb|ADO53628.1| Thymidylate synthase [Bifidobacterium bifidum S17]
          Length = 311

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 149/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL
Sbjct: 48  YEDLVRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFL 107

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119
           +G SNV +L  H V IWD+WAD++G+LGP+YGVQWRSWP          IDQI +++  +
Sbjct: 108 KGSSNVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIGNVLDLI 167

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIA
Sbjct: 168 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIA 227

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   P++ I      L
Sbjct: 228 SYSLLTMMIAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEI-RKADSL 286

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDFT+  Y  H  I A V+V
Sbjct: 287 FDYQYEDFTIVDYRHHPTIKAPVAV 311


>gi|308178169|ref|YP_003917575.1| thymidylate synthase [Arthrobacter arilaitensis Re117]
 gi|307745632|emb|CBT76604.1| thymidylate synthase [Arthrobacter arilaitensis Re117]
          Length = 267

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 159/261 (60%), Positives = 189/261 (72%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  LLR V++ G+ + DRTG GT S FG Q+RFDL   FPL+TTK+VH+KSV  ELLWFL
Sbjct: 7   YETLLRDVLENGTAKEDRTGTGTLSVFGRQIRFDLQDSFPLITTKRVHFKSVAAELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L   GV IW+EWAD+DGELGP+YGVQWRSWP  +G  IDQIS +V SLR +P
Sbjct: 67  RGESNVKWLQDQGVRIWNEWADEDGELGPVYGVQWRSWPTPEGGYIDQISQLVDSLRNNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHIVSAWNVA I  MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRHIVSAWNVAEIQNMALPPCHVFFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA  +  + GEFI T GDVH+Y NH EQ   QLSR P   P +  N     +  + 
Sbjct: 187 LTAMLAHQLDLEPGEFIWTGGDVHIYTNHVEQVKEQLSRDPYPYPTLSFNSKPDSIFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            EDF++  Y+ H  I   V+V
Sbjct: 247 LEDFSINDYQHHPTIKGTVAV 267


>gi|315225492|ref|ZP_07867305.1| thymidylate synthase [Capnocytophaga ochracea F0287]
 gi|314944590|gb|EFS96626.1| thymidylate synthase [Capnocytophaga ochracea F0287]
          Length = 274

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 169/277 (61%), Positives = 208/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLRH++  G  + DRTG GT S FGYQMRFDL+KGFPL+TTKK+H KSV++ELL
Sbjct: 1   MQTYHDLLRHILDNGYSKDDRTGTGTTSVFGYQMRFDLNKGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGV IW+EWAD++G+LGP+YG QWR W   +G  IDQI ++V++L+
Sbjct: 61  WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRHW---NGEAIDQIKTVVETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 118 QNPESRRIIVSAWNPSVLPDTGKSFTENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLTMMLA V   Q G+F+HT GDVH+YNNH EQ  LQLSR+PR L
Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +N  + DL +F YEDF L  Y+P+  I A+VSV
Sbjct: 238 PTMHLNRAVKDLFAFDYEDFRLEGYDPYPTIKAQVSV 274


>gi|332531037|ref|ZP_08406956.1| thymidylate synthase [Hylemonella gracilis ATCC 19624]
 gi|332039518|gb|EGI75925.1| thymidylate synthase [Hylemonella gracilis ATCC 19624]
          Length = 283

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 158/269 (58%), Positives = 195/269 (72%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT S FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF
Sbjct: 15  QYEDFMRHVHTHGVAKSDRTGTGTTSVFGHQMRFDLNEGFPLVTTKKVHLKSIILELLWF 74

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G SN ++L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS ++++L+++
Sbjct: 75  LTGSSNNNWLKDRGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKSN 134

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + KMAL PCH  FQFYV         GKLSCQLYQRS D+FLG+P
Sbjct: 135 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPSQVAGEPGKLSCQLYQRSADIFLGVP 194

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A   G   G+FI T GD H+Y+NH EQ +LQLSR P   P + I   
Sbjct: 195 FNIASYALLTHMVAQQCGLGVGDFIWTGGDCHIYSNHHEQVELQLSRQPYPYPVLHIKRQ 254

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  ++YEDF +R Y+ H AI A V+V
Sbjct: 255 PDSIFDYQYEDFEVRDYQCHPAIKAPVAV 283


>gi|302556750|ref|ZP_07309092.1| thymidylate synthase [Streptomyces griseoflavus Tu4000]
 gi|302474368|gb|EFL37461.1| thymidylate synthase [Streptomyces griseoflavus Tu4000]
          Length = 265

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 156/262 (59%), Positives = 193/262 (73%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL+ V+  G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH KS+V+ELLWF
Sbjct: 5   QYEDLLQLVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLKSIVYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  HGV+IWDEWAD +G+LGP+YG QWRSWP  DG  IDQI  ++ +LR D
Sbjct: 65  LRGDSNVRWLQEHGVTIWDEWADDNGDLGPVYGAQWRSWPTPDGRHIDQIEEVLGTLRRD 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV+ + KMAL PCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRMIVSAWNVSELSKMALAPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A   G + G+FI T GD H+Y+NH  Q   QLSR+P   P + +      L  +
Sbjct: 185 LLTHMVAQQSGLEPGDFIWTGGDCHIYDNHVAQVTEQLSRTPFAFPALEL-RRADSLFDY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            Y D  +  Y  H AI A V+V
Sbjct: 244 SYSDVQVAGYRHHPAIKAPVAV 265


>gi|325981748|ref|YP_004294150.1| thymidylate synthase [Nitrosomonas sp. AL212]
 gi|325531267|gb|ADZ25988.1| thymidylate synthase [Nitrosomonas sp. AL212]
          Length = 264

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 201/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++HVI  G  + DRTG+GT S FG+QMRFDL+ GFPL+TTKK H KS++HELL
Sbjct: 1   MRQYLELMQHVIDHGFQKTDRTGIGTLSIFGHQMRFDLNDGFPLVTTKKCHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RGD+NV YLH++GVSIWDEWAD +G LGPIYG QWRSW   DG  IDQ+  +++ + 
Sbjct: 61  WFIRGDTNVRYLHKYGVSIWDEWADVNGNLGPIYGQQWRSWMSADGQKIDQLQQVIKQII 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VS+WNV  + +M LPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 DTPDSRRMLVSSWNVGELHRMRLPPCHALFQFYVADNKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V     GEF+HTLGD HLY NH EQA  QLSR PR LP M +NP I  + 
Sbjct: 181 YALLTMMIAQVSNLGVGEFVHTLGDAHLYLNHLEQAREQLSRQPRPLPVMRLNPMIRTIS 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F YEDF L +Y+PH  I A V+V
Sbjct: 241 EFEYEDFVLENYDPHPPIKAPVAV 264


>gi|330720247|gb|EGG98613.1| Thymidylate synthase [gamma proteobacterium IMCC2047]
          Length = 277

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/266 (56%), Positives = 192/266 (72%), Gaps = 2/266 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V+  G D+ DRTGVGTRS FG Q+RFDL  GFPL+TTK  H KS++HELL
Sbjct: 12  MQQYLDLMQDVLDNGVDKSDRTGVGTRSVFGRQLRFDLGAGFPLVTTKNCHLKSIIHELL 71

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV+IWDEWAD+ G LGP+YG QWR+W   DG  +DQIS +V +L+
Sbjct: 72  WFLQGDTNIRYLKENGVTIWDEWADEKGNLGPVYGEQWRAWRKPDGGTVDQISKLVHNLK 131

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V A+N  + D+MALPPCH LFQFYV NG+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 132 HNPDSRRLLVVAYNPGVADEMALPPCHSLFQFYVANGRLSCQLYQRSADLFLGVPFNIAS 191

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ--ADLQLSRSPRTLPQMIINPNIVD 238
           Y++LT MLA       GEF+HT GD HLY+NH        QL R PR LP++ I      
Sbjct: 192 YAILTHMLAQQADLDVGEFVHTFGDCHLYHNHLTDDIVHEQLRRKPRKLPKLKIKRKPQS 251

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  + YEDF +  Y+P+  I A ++V
Sbjct: 252 MFDYCYEDFEIEGYDPYPTIKAPIAV 277


>gi|304309792|ref|YP_003809390.1| Thymidylate synthase [gamma proteobacterium HdN1]
 gi|301795525|emb|CBL43723.1| Thymidylate synthase [gamma proteobacterium HdN1]
          Length = 277

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 171/277 (61%), Positives = 206/277 (74%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLRHV   G  + DRTG GT S FGYQMRFDL+ GFPL+TTKKVH KS++HELL
Sbjct: 1   MKQYLDLLRHVRDHGVRKSDRTGTGTLSVFGYQMRFDLAAGFPLVTTKKVHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ YL  HGVSIW+EWA + GELGP+YG QWRSW    G  +DQI+ ++  +R
Sbjct: 61  WFLRGETNIQYLTDHGVSIWNEWATESGELGPVYGKQWRSWDGPHGETVDQIAWLIDEIR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN AL+                ALPPCHCLFQFYV  GKLSCQLYQRS
Sbjct: 121 NNPDSRRMVVSAWNPALLPDTRVSPRQNAANGLQALPPCHCLFQFYVAEGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           GDVFLG+PFNIASY+LLT+M+A V G Q GEF+H+ GDVHLY NH EQA+ QL+R+P  L
Sbjct: 181 GDVFLGVPFNIASYALLTLMVAQVTGLQPGEFVHSFGDVHLYLNHLEQAETQLARAPLAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP I ++  FRY+DFTL  Y P+  I A V+V
Sbjct: 241 PKMQLNPAITNVFDFRYDDFTLTDYAPYDPIRAPVAV 277


>gi|254464749|ref|ZP_05078160.1| thymidylate synthase [Rhodobacterales bacterium Y4I]
 gi|206685657|gb|EDZ46139.1| thymidylate synthase [Rhodobacterales bacterium Y4I]
          Length = 277

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 150/277 (54%), Positives = 194/277 (70%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD LRH++  G    DRTG GT S FG Q R+ L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYLDQLRHILDNGVPSDDRTGTGTLSCFGMQARYSLADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P              Y   
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRRFPKLELAEGTTGDEPLYRAG 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQI+ +V+ +R  P SRR IVSAWN   +  MALPPCH L+Q  V  GK+  QLYQRS
Sbjct: 121 SVDQIADLVEMIRKSPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRVAGGKMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LL  MLA V G++ G+F+HT+GD H+Y+NH EQ  LQLSRSP+ L
Sbjct: 181 ADMFLGVPFNIASYALLLAMLAHVTGYEAGDFVHTMGDAHIYSNHVEQVRLQLSRSPKPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PQ+ I   +  +  F+YEDF + +Y+P  AI A V+V
Sbjct: 241 PQLRIKRQVSSIFDFKYEDFEILNYDPDPAIKAPVAV 277


>gi|291394174|ref|XP_002713484.1| PREDICTED: thymidylate synthase [Oryctolagus cuniculus]
          Length = 310

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 134/282 (47%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 29  QYLGQIEHILRCGFRKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 88

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD  A +D            G+LGP+YG QWR +         
Sbjct: 89  IKGSTNAKELSSKGVKIWDANASRDFLDSLGFSTRQEGDLGPVYGFQWRHFGAEYKDKDS 148

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 149 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 208

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E    QL R
Sbjct: 209 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHIYLNHIEPLKTQLQR 268

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF L  Y PH  I  +++V
Sbjct: 269 EPRPFPKLKILRKVETIDDFKAEDFQLEGYNPHPTIKMEMAV 310


>gi|91215934|ref|ZP_01252903.1| thymidylate synthase [Psychroflexus torquis ATCC 700755]
 gi|91185911|gb|EAS72285.1| thymidylate synthase [Psychroflexus torquis ATCC 700755]
          Length = 274

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 157/277 (56%), Positives = 205/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+ H++  G  + DRTG GT+S FGYQMRFDL++GFPL+T+KK+H KS+++ELL
Sbjct: 1   MKQYHDLISHILNNGIQKGDRTGTGTKSVFGYQMRFDLNEGFPLVTSKKIHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+SYL  +GV IW+EWA++DG+LGP+YG QWR+W   D   IDQI  ++ +L+
Sbjct: 61  WFLKGDTNISYLKENGVKIWNEWANEDGDLGPVYGHQWRNWNSED---IDQIKELIHTLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV  GKLSCQLYQRS
Sbjct: 118 TNPNSRRMMVSAWNPSVMPDTSASFDDNIANGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+L TMM+A V G + G+FIHT GD H+YNNH EQ DLQLSR+   L
Sbjct: 178 ADVFLGVPFNIASYALFTMMVAQVCGLKLGDFIHTFGDAHIYNNHLEQVDLQLSRTEIPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP +  +  F++EDFTL +Y+PH  I  KV++
Sbjct: 238 PTMKLNPEVNSIFDFKFEDFTLENYDPHPHIKGKVAI 274


>gi|149924822|ref|ZP_01913162.1| thymidylate synthase [Plesiocystis pacifica SIR-1]
 gi|149814302|gb|EDM73904.1| thymidylate synthase [Plesiocystis pacifica SIR-1]
          Length = 273

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 171/273 (62%), Positives = 206/273 (75%), Gaps = 9/273 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LL  V++ G+ + DRTG GT+S FG Q+RFDL++GFPL+TTKKVH +S++HELL
Sbjct: 1   MRAYLELLDRVLREGTTKTDRTGTGTKSLFGPQLRFDLAQGFPLVTTKKVHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG---------NVIDQ 111
           WFLRG++N++YLH + VSIWDEWAD DGELGPIYG QWRSWP++             IDQ
Sbjct: 61  WFLRGETNLAYLHENKVSIWDEWADNDGELGPIYGEQWRSWPNHRADGSADSSQPQTIDQ 120

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           +S +V  LR +P SRR ++SAWNVA +  MAL PCHCLFQFYV  GKLSCQLYQRS D+F
Sbjct: 121 MSWLVDELRRNPDSRRLVISAWNVADLPHMALAPCHCLFQFYVAEGKLSCQLYQRSADLF 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLTMM+A V+G +YGEF+HT GD HLY NH EQA LQLSR PR LP M 
Sbjct: 181 LGVPFNIASYALLTMMIAKVVGLEYGEFVHTFGDAHLYLNHLEQAQLQLSREPRPLPTMH 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           I+     L  F YEDF L  YEPH  I A V+V
Sbjct: 241 IDRVPDSLFEFCYEDFRLEGYEPHPRIKAPVAV 273


>gi|256820074|ref|YP_003141353.1| thymidylate synthase [Capnocytophaga ochracea DSM 7271]
 gi|256581657|gb|ACU92792.1| thymidylate synthase [Capnocytophaga ochracea DSM 7271]
          Length = 274

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 168/277 (60%), Positives = 208/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLRH++  G  + DRTG GT S FGYQMRFDL+KGFPL+TTKK+H KSV++ELL
Sbjct: 1   MQTYHDLLRHILDNGYSKDDRTGTGTTSVFGYQMRFDLNKGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGV IW+EWAD++G+LGP+YG QWR W   +G  IDQI ++V++L+
Sbjct: 61  WFLKGDTNIKYLTDHGVRIWNEWADENGDLGPVYGAQWRHW---NGEAIDQIKTVVETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 118 QNPESRRIIVSAWNPSVLPDTGKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLTMMLA V   Q G+F+HT GDVH+YNNH EQ  LQLSR+PR L
Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +N  + DL +F Y+DF L  Y+P+  I A+VSV
Sbjct: 238 PTMHLNRAVKDLFAFDYDDFRLEGYDPYPTIKAQVSV 274


>gi|239814670|ref|YP_002943580.1| thymidylate synthase [Variovorax paradoxus S110]
 gi|239801247|gb|ACS18314.1| thymidylate synthase [Variovorax paradoxus S110]
          Length = 289

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 154/269 (57%), Positives = 191/269 (71%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH +S++ ELLWF
Sbjct: 21  QYEDFMRHVDTHGVHKSDRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLRSIIQELLWF 80

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G SN ++L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS ++++L+ +
Sbjct: 81  LTGSSNNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKTN 140

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + KMAL PCH  FQFYV         GKLSCQLYQRS D+FLG+P
Sbjct: 141 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPPQAPGERGKLSCQLYQRSADIFLGVP 200

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A       G+FI T GD H+Y+NH EQ  LQLSR+P   P + I   
Sbjct: 201 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVALQLSRTPYPYPTLHIKRK 260

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  ++YEDF +  Y  H  I A V+V
Sbjct: 261 PASIFDYQYEDFEVLDYRHHDPIKAPVAV 289


>gi|254496004|ref|ZP_05108907.1| thymidylate synthase [Legionella drancourtii LLAP12]
 gi|254354753|gb|EET13385.1| thymidylate synthase [Legionella drancourtii LLAP12]
          Length = 264

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 196/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+ YL LL+H+++ G+++ DRTG GT S FGYQMRFDL +GFPL+TTKK+H +S+VHELL
Sbjct: 1   MNTYLHLLKHILQQGTEKTDRTGTGTLSVFGYQMRFDLRQGFPLVTTKKLHMRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  +GVSIWDEWAD +G LGP+YG QWR+WP  DG  IDQ+S++V  ++
Sbjct: 61  WFLKGDTNIAYLKENGVSIWDEWADNNGNLGPVYGKQWRNWPTADGRHIDQLSAVVAQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWNV  +++MAL PCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPDSRRLLVSAWNVGELEQMALMPCHALFQFYVANNTLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+FI T GD HLY NH EQA  QL R P  L  + I      L 
Sbjct: 181 YALLTHMVAQQCNLEVGDFIWTGGDCHLYLNHLEQARTQLQREPLPLATLNIQRKPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF   +Y+ H AI A ++V
Sbjct: 241 EYVYDDFEFANYQSHPAIKAPIAV 264


>gi|309389314|gb|ADO77194.1| thymidylate synthase [Halanaerobium praevalens DSM 2228]
          Length = 263

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 204/264 (77%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL + +H++  G DR DRTG GTRS FGYQ+RF+L KGFPLLTTKK++WK++VHELL
Sbjct: 1   MKKYLKMCQHILDNGVDREDRTGTGTRSVFGYQLRFNLKKGFPLLTTKKIYWKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ + V IWDEWAD+ G+LG IYG QWR+W   DG  IDQIS +++ ++
Sbjct: 61  WFLKGDTNIKYLNDNNVHIWDEWADEHGDLGHIYGHQWRNWEGKDG-TIDQISEVIEQIK 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +V+AWNV  ++ MALPPCH LFQFYV +GKLSCQLYQRS D FLG+PFNIAS
Sbjct: 120 TNPNSRRLLVNAWNVGDLENMALPPCHLLFQFYVADGKLSCQLYQRSCDTFLGVPFNIAS 179

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A V+G + G+FI + GDVH+Y+NHFEQ   QL R PR L Q+ +NP I +L 
Sbjct: 180 YSLLTHMIAQVVGLEVGDFIWSGGDVHIYHNHFEQIKKQLKRKPRDLAQIKLNPKINNLF 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YED  L +Y PH  I  KVSV
Sbjct: 240 DFKYEDIKLLNYNPHPLIKGKVSV 263


>gi|152968378|ref|YP_001364162.1| Thymidylate synthase [Kineococcus radiotolerans SRS30216]
 gi|189036937|sp|A6WGF9|TYSY_KINRD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|151362895|gb|ABS05898.1| Thymidylate synthase [Kineococcus radiotolerans SRS30216]
          Length = 268

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 156/262 (59%), Positives = 201/262 (76%), Gaps = 2/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLRHV+  G+ + DRTG GTRS FG+Q+R+DLS GFPL+TTK+VH+KS+  ELLWF
Sbjct: 9   QYEDLLRHVLATGTPKSDRTGTGTRSVFGHQLRYDLSAGFPLVTTKRVHFKSIALELLWF 68

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGD NV +L   GV+IWDEWAD++G+LGP+YGVQWRSWP  DG  +DQI+ ++ +LR D
Sbjct: 69  LRGDGNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGRHVDQIAQVLHTLRTD 128

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNVA +D+MAL PCH  FQF+V +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 129 PDSRRMVVSAWNVAELDRMALAPCHAFFQFHVADGKLSCQLYQRSADLFLGVPFNIASYA 188

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT ++A+ +G + G+F+ T GDVH+Y+NH EQ   QL+R+P   P++ + P    L   
Sbjct: 189 LLTHLVAAEVGLEVGDFVWTGGDVHVYDNHVEQVTEQLTRTPYPFPRLAVRPAG--LFEH 246

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YEDF +  Y  H AI A V+V
Sbjct: 247 EYEDFEVLDYRHHPAIKAPVAV 268


>gi|260220887|emb|CBA28903.1| Thymidylate synthase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 296

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 153/270 (56%), Positives = 195/270 (72%), Gaps = 8/270 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH +S++ ELLWF
Sbjct: 27  QYEDFMRHVHTTGVFKSDRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLRSIIQELLWF 86

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           L G SN ++L   GV+IWDEWA+ + G+LGP+YGVQWRSWP  DG  IDQI+ ++++L++
Sbjct: 87  LTGSSNNNWLKERGVTIWDEWANPETGDLGPVYGVQWRSWPTPDGGHIDQIADVIKTLKS 146

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGI 174
           +P SRR IVSAWNVA + KMAL PCH  FQFYV         G+LSCQLYQRS D+FLG+
Sbjct: 147 NPDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPATEPGGKGRLSCQLYQRSADIFLGV 206

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT M+A       G+FI T GD H+Y+NH EQ +LQLSR+P   P + I  
Sbjct: 207 PFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHTEQVELQLSRAPMAYPTLNIKR 266

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               +  +++EDF +  YE H AI A V+V
Sbjct: 267 KPESIFDYQFEDFEVLGYECHPAIKAPVAV 296


>gi|91787702|ref|YP_548654.1| thymidylate synthase [Polaromonas sp. JS666]
 gi|123165061|sp|Q12CI6|TYSY_POLSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|91696927|gb|ABE43756.1| thymidylate synthase [Polaromonas sp. JS666]
          Length = 284

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 155/269 (57%), Positives = 192/269 (71%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH KS+V ELLWF
Sbjct: 16  QYEDFMRHVDAHGVFKADRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLKSIVQELLWF 75

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G S+ ++L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS ++++L+ +
Sbjct: 76  LTGSSDNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISEVIKTLKTN 135

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + KMAL PCH  FQFYV         GKLSCQLYQRS D+FLG+P
Sbjct: 136 PDSRRIIVSAWNVADLSKMALMPCHAFFQFYVAPATEAGGKGKLSCQLYQRSADIFLGVP 195

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNI SY+LLT M+A       G+FI T GD H+Y+NH EQ  LQLSR+P   P + I   
Sbjct: 196 FNIGSYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVALQLSRAPFPYPTLHIKRK 255

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  ++++DF    Y+ HAAI A V+V
Sbjct: 256 PESIFDYQFDDFEFLDYQHHAAIKAPVAV 284


>gi|262274909|ref|ZP_06052720.1| thymidylate synthase [Grimontia hollisae CIP 101886]
 gi|262221472|gb|EEY72786.1| thymidylate synthase [Grimontia hollisae CIP 101886]
          Length = 279

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 148/279 (53%), Positives = 191/279 (68%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G+DR DRTGVGTRS FG QMRFDLS+GFPLLTTKK++ ++++HELL
Sbjct: 1   MKQYLDLMQDILDNGTDRGDRTGVGTRSVFGRQMRFDLSEGFPLLTTKKLYTRAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  + V+IWDEWA + G+LGP+YG QWRSW   DG+ +DQI+ +++ ++
Sbjct: 61  WFLNGDTNVKYLQDNKVTIWDEWATETGDLGPVYGAQWRSWACPDGSTVDQIAELIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRRHI++AWN A +              KMAL PCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 TKPNSRRHIITAWNPADLPDESISPQANAEQGKMALAPCHCLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ--ADLQLSRSPR 225
            D FLG+PFNIASY+L T M+A       GEF+HT GDVHLY+NH        QL R P 
Sbjct: 181 ADYFLGVPFNIASYALFTHMIAQQCDLDVGEFVHTFGDVHLYHNHLTDDIVYEQLKREPG 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             P + I      +  ++ EDF +  YE    I A +++
Sbjct: 241 KRPTLKIKRKPASIFDYKLEDFEIEGYEAQPTIKAPIAI 279


>gi|257070033|ref|YP_003156288.1| thymidylate synthase [Brachybacterium faecium DSM 4810]
 gi|256560851|gb|ACU86698.1| thymidylate synthase [Brachybacterium faecium DSM 4810]
          Length = 267

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 153/261 (58%), Positives = 192/261 (73%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G  + DRTG GTRS FG Q+RFDLS+GFPL+TTK+VH +S++ ELLWFL
Sbjct: 7   YEDLLREVMETGHAKGDRTGTGTRSLFGKQIRFDLSQGFPLITTKRVHTRSIILELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+NV +L   GVSIWDEWAD++G+LGP+YG QWRSWP  DG VIDQI+ +V+ +R +P
Sbjct: 67  RGDTNVRWLQERGVSIWDEWADENGDLGPVYGAQWRSWPTPDGGVIDQITDVVEQIRTNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWN A I +MAL PCH LFQF V +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRLIVSAWNPADIPQMALAPCHALFQFEVHDGKLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A     + G+F+ T GD H+Y+NH EQ   QLSR P   P++ I      +L + 
Sbjct: 187 LTHMVAQQTDLEVGDFVWTGGDCHIYDNHHEQVQRQLSREPFPSPRLRIARRPESILDYE 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            ED  +  Y+ H  I A V+V
Sbjct: 247 LEDIEILDYQHHKGIKAPVAV 267


>gi|118467946|ref|YP_887007.1| thymidylate synthase [Mycobacterium smegmatis str. MC2 155]
 gi|166231713|sp|A0QVR9|TYSY_MYCS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|118169233|gb|ABK70129.1| thymidylate synthase [Mycobacterium smegmatis str. MC2 155]
          Length = 266

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 166/261 (63%), Positives = 202/261 (77%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V + G+ + DRTG GTRS FG+QMR+DLS GFPL+TTKKVH KSV++ELLWFL
Sbjct: 7   YEDLLRLVTERGTPKSDRTGTGTRSLFGHQMRYDLSAGFPLITTKKVHTKSVIYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  HGV+IWDEWA + G+LGPIYGVQWRSWP   G  IDQISS ++ L++DP
Sbjct: 67  RGDSNVRWLQEHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISSALELLKSDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ  LQLSR PR  P++++ P    +  + 
Sbjct: 187 LTHMMAAQAGLDVGEFIWTGGDCHIYDNHTEQVALQLSREPRPYPELVLAPR-DSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  + +Y+PH AI A V+V
Sbjct: 246 YEDIAIVNYDPHPAIKAPVAV 266


>gi|296139474|ref|YP_003646717.1| thymidylate synthase [Tsukamurella paurometabola DSM 20162]
 gi|296027608|gb|ADG78378.1| thymidylate synthase [Tsukamurella paurometabola DSM 20162]
          Length = 265

 Score =  374 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 156/261 (59%), Positives = 198/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ R DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KS+ +ELLWFL
Sbjct: 6   YEDLLRDVLANGTHRPDRTGTGTRSVFGRQLRYDLSEGFPLITTKRVHMKSIAYELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  HGV+IWDEWAD +GELGP+YGVQWRSWP  +G  IDQI++ ++ L+ DP
Sbjct: 66  RGDSNVRWLQEHGVTIWDEWADANGELGPVYGVQWRSWPTPNGEHIDQIATAIELLKTDP 125

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ I+ MALPPCH  FQFY  +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 126 SSRRNIVSAWNVSEIENMALPPCHAFFQFYAADGKLSCQLYQRSADLFLGVPFNIASYAL 185

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+ +G + G+F+ T GD H+Y+NH EQ   QLSR P   P++ +      +  + 
Sbjct: 186 LTHMVAAQVGLEPGDFVWTGGDCHIYDNHVEQVTEQLSREPYPYPRLELAERP-SIFDYE 244

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y D T+  Y+ H AI A V+V
Sbjct: 245 YGDITVHDYQHHPAIKAPVAV 265


>gi|297625969|ref|YP_003687732.1| Thymidylate synthase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921734|emb|CBL56292.1| Thymidylate synthase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 270

 Score =  374 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 157/270 (58%), Positives = 202/270 (74%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G D+ DRTGVGTRS FG+QMRF L+ GFPL+TTKK++ + V  ELL
Sbjct: 1   MRQYLDLLTRVMDEGIDKSDRTGVGTRSVFGHQMRFHLADGFPLVTTKKIYTRGVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +LHR+ V IWDEWAD++G+LGP+YG QWRSWP   G  +DQ++ ++  ++
Sbjct: 61  WFLRGDTNIGWLHRNNVHIWDEWADENGDLGPVYGHQWRSWPVPGGGHVDQLAKVIDQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------NGKLSCQLYQRSGDVFLGI 174
            DP SRR +VSAWNVA +D MALPPCH LFQFYV        GKLSC LYQRS D+FLG+
Sbjct: 121 NDPNSRRLVVSAWNVAEVDDMALPPCHLLFQFYVTPGEDGQPGKLSCGLYQRSADLFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT M+A V G   G+F+HTLGD H+Y+NHF+Q   QLSR+P+ LP++ +NP
Sbjct: 181 PFNIASYALLTHMVAQVCGLGVGDFVHTLGDAHIYHNHFDQVAEQLSRTPKALPRLALNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            + ++  F   D T+  YEP  AI A ++V
Sbjct: 241 QVRNIDEFELSDITVEGYEPDPAIKAPIAV 270


>gi|108799079|ref|YP_639276.1| thymidylate synthase [Mycobacterium sp. MCS]
 gi|119868194|ref|YP_938146.1| thymidylate synthase [Mycobacterium sp. KMS]
 gi|126434685|ref|YP_001070376.1| thymidylate synthase [Mycobacterium sp. JLS]
 gi|123070298|sp|Q1BA64|TYSY_MYCSS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231714|sp|A3PYA8|TYSY_MYCSJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231715|sp|A1UEU8|TYSY_MYCSK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|108769498|gb|ABG08220.1| thymidylate synthase [Mycobacterium sp. MCS]
 gi|119694283|gb|ABL91356.1| thymidylate synthase [Mycobacterium sp. KMS]
 gi|126234485|gb|ABN97885.1| thymidylate synthase [Mycobacterium sp. JLS]
          Length = 266

 Score =  374 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 161/261 (61%), Positives = 199/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V + G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KSVV+ELLWFL
Sbjct: 7   YEDLLRLVFERGTPKSDRTGTGTRSLFGHQMRYDLAAGFPLITTKKVHLKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  HGV+IWDEWA + GELGP+YGVQWRSWP   G  +DQIS+ V  LR DP
Sbjct: 67  RGESNVRWLQEHGVTIWDEWASETGELGPVYGVQWRSWPTPSGGHVDQISAAVDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ   QLSR PR  P++++      +  + 
Sbjct: 187 LTHMMAAQAGLGVGEFVWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAQR-DSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++Y+PH AI A V+V
Sbjct: 246 YEDVVVKNYDPHPAIKAPVAV 266


>gi|149371858|ref|ZP_01891177.1| thymidylate synthetase [unidentified eubacterium SCB49]
 gi|149354998|gb|EDM43559.1| thymidylate synthetase [unidentified eubacterium SCB49]
          Length = 274

 Score =  374 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 159/277 (57%), Positives = 209/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+HV+K G+ + DRTG GT+S FGYQMRFDLS+GFP++TTKKVH KS+++ELL
Sbjct: 1   MKQYHDLLKHVLKEGTLKADRTGTGTKSVFGYQMRFDLSEGFPMVTTKKVHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD++G LGP+YG QWR+W   +   IDQI+ I+++L+
Sbjct: 61  WFLKGDTNIEYLKENGVRIWNEWADENGNLGPVYGHQWRNW---NSEGIDQIADIIETLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPDSRRMMVSAWNPSVMPDTSKPFSENVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G++ G+FIHT GD H+Y+NH EQ +LQLSR  R L
Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGYEAGDFIHTFGDAHIYSNHMEQIELQLSRDIRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP+I D+  F ++ FTL  Y PH  I   V++
Sbjct: 238 PKMTLNPDIKDIFGFTFDSFTLTDYNPHPHIKGAVAI 274


>gi|15609901|ref|NP_217280.1| thymidylate synthase [Mycobacterium tuberculosis H37Rv]
 gi|31793939|ref|NP_856432.1| thymidylate synthase [Mycobacterium bovis AF2122/97]
 gi|121638643|ref|YP_978867.1| thymidylate synthase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148662606|ref|YP_001284129.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra]
 gi|167968591|ref|ZP_02550868.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra]
 gi|215428196|ref|ZP_03426115.1| thymidylate synthase [Mycobacterium tuberculosis T92]
 gi|219558774|ref|ZP_03537850.1| thymidylate synthase [Mycobacterium tuberculosis T17]
 gi|224991135|ref|YP_002645824.1| thymidylate synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|254232862|ref|ZP_04926189.1| thymidylate synthase thyA [Mycobacterium tuberculosis C]
 gi|254365415|ref|ZP_04981460.1| thymidylate synthase thyA [Mycobacterium tuberculosis str. Haarlem]
 gi|289444308|ref|ZP_06434052.1| thymidylate synthase [Mycobacterium tuberculosis T46]
 gi|289448420|ref|ZP_06438164.1| thymidylate synthase thyA [Mycobacterium tuberculosis CPHL_A]
 gi|289570943|ref|ZP_06451170.1| thymidylate synthase thyA [Mycobacterium tuberculosis T17]
 gi|289575461|ref|ZP_06455688.1| thymidylate synthase thyA [Mycobacterium tuberculosis K85]
 gi|289746567|ref|ZP_06505945.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987]
 gi|289751421|ref|ZP_06510799.1| thymidylate synthase thyA [Mycobacterium tuberculosis T92]
 gi|289754869|ref|ZP_06514247.1| thymidylate synthase [Mycobacterium tuberculosis EAS054]
 gi|289758891|ref|ZP_06518269.1| thymidylate synthase [Mycobacterium tuberculosis T85]
 gi|298526231|ref|ZP_07013640.1| thymidylate synthase thyA [Mycobacterium tuberculosis 94_M4241A]
 gi|308377122|ref|ZP_07441195.2| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu008]
 gi|308405964|ref|ZP_07494573.2| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu012]
 gi|54039796|sp|P67045|TYSY_MYCBO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54042282|sp|P67044|TYSY_MYCTU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231712|sp|A1KMA6|TYSY_MYCBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231716|sp|A5U6B7|TYSY_MYCTA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790245|sp|C1AFM7|TYSY_MYCBT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|2624286|emb|CAA15560.1| PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|31619533|emb|CAD94971.1| PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) [Mycobacterium
           bovis AF2122/97]
 gi|121494291|emb|CAL72769.1| Probable thymidylate synthase thyA [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601921|gb|EAY60931.1| thymidylate synthase thyA [Mycobacterium tuberculosis C]
 gi|134150928|gb|EBA42973.1| thymidylate synthase thyA [Mycobacterium tuberculosis str. Haarlem]
 gi|148506758|gb|ABQ74567.1| thymidylate synthase [Mycobacterium tuberculosis H37Ra]
 gi|224774250|dbj|BAH27056.1| thymidylate synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289417227|gb|EFD14467.1| thymidylate synthase [Mycobacterium tuberculosis T46]
 gi|289421378|gb|EFD18579.1| thymidylate synthase thyA [Mycobacterium tuberculosis CPHL_A]
 gi|289539892|gb|EFD44470.1| thymidylate synthase thyA [Mycobacterium tuberculosis K85]
 gi|289544697|gb|EFD48345.1| thymidylate synthase thyA [Mycobacterium tuberculosis T17]
 gi|289687095|gb|EFD54583.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987]
 gi|289692008|gb|EFD59437.1| thymidylate synthase thyA [Mycobacterium tuberculosis T92]
 gi|289695456|gb|EFD62885.1| thymidylate synthase [Mycobacterium tuberculosis EAS054]
 gi|289714455|gb|EFD78467.1| thymidylate synthase [Mycobacterium tuberculosis T85]
 gi|298496025|gb|EFI31319.1| thymidylate synthase thyA [Mycobacterium tuberculosis 94_M4241A]
 gi|308348858|gb|EFP37709.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu008]
 gi|308364984|gb|EFP53835.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu012]
 gi|326904379|gb|EGE51312.1| thymidylate synthase thyA [Mycobacterium tuberculosis W-148]
          Length = 263

 Score =  374 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 202/264 (76%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELL
Sbjct: 1   MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSN+ +LH HGV+IWDEWA   GELGPIYGVQWRSWP   G  IDQIS+ +  LR
Sbjct: 61  WFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  I++MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A+  G   GEFI T GD H+Y+NH EQ  LQLSR PR  P++++  +   + 
Sbjct: 181 YALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIF 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YED  +++Y+PH AI A V+V
Sbjct: 240 EYTYEDIVVKNYDPHPAIKAPVAV 263


>gi|260886113|ref|ZP_05736540.2| thymidylate synthase [Prevotella tannerae ATCC 51259]
 gi|260850704|gb|EEX70573.1| thymidylate synthase [Prevotella tannerae ATCC 51259]
          Length = 340

 Score =  374 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  +   G+ + DRTG GT+S FG+QMRF ++ GFPLLTTKK+H KS++HELL
Sbjct: 77  MKQYLDLLNEINTHGTVKHDRTGTGTKSIFGHQMRFQMADGFPLLTTKKLHVKSIIHELL 136

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RG++N+  L   GVSIWDEWAD++G+LGPIYG QWR WPD  G  IDQ++  V+ ++
Sbjct: 137 WFIRGETNIKSLKEAGVSIWDEWADENGDLGPIYGYQWRHWPDGRGGEIDQLAQAVELIK 196

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  I++M LPPCH LFQ+YV +G+LS QLYQRS D FLG+PFNIAS
Sbjct: 197 HKPDSRRIIVSAWNVGDIERMKLPPCHILFQYYVADGRLSLQLYQRSADTFLGVPFNIAS 256

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL MM A V   + G+FI+T GD HLY NH EQA LQL+R+P  LP M +NP    L 
Sbjct: 257 YALLLMMTAQVTDLEPGDFIYTTGDTHLYLNHLEQARLQLTRTPGLLPTMRLNPERRRLE 316

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y P   I A VSV
Sbjct: 317 DFRYEDFELIDYNPQPHIAAPVSV 340


>gi|326432420|gb|EGD77990.1| thymidylate synthase [Salpingoeca sp. ATCC 50818]
          Length = 293

 Score =  374 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 136/283 (48%), Positives = 187/283 (66%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           H+YL L++ ++  G  R DRTG GT S FG QMRF L +GFPLLTTK+V W+ V+ ELLW
Sbjct: 11  HEYLRLVQRILDTGKTRSDRTGTGTISLFGAQMRFSLREGFPLLTTKRVFWRGVLEELLW 70

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F+ GD+N ++L    V IWD                ++G+LGP+YG QWR +        
Sbjct: 71  FIAGDTNANHLAEKKVHIWDANGSKEFLEQRGLGHREEGDLGPVYGFQWRHFGAQYTDMH 130

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQI+++++ ++ +P SRR I+SAWN   +  MALPPCH L QFYV +G+LSC
Sbjct: 131 ADYQGKGVDQIANVIEQIKTNPDSRRIIMSAWNPVDLPHMALPPCHVLAQFYVQDGELSC 190

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT+M+A V G + G+F+HT+GD H+Y+NH +    QL+
Sbjct: 191 QLYQRSADMGLGVPFNIASYSLLTVMIAHVCGLRPGDFVHTIGDAHVYSNHVDALKEQLT 250

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P + I  ++  +  F+ EDF L  Y+PH  I  K++V
Sbjct: 251 REPRPFPTLNIKRDVTSIDDFKAEDFELVGYKPHGKIAMKMAV 293


>gi|224046130|ref|XP_002194568.1| PREDICTED: thymidylate synthetase [Taeniopygia guttata]
          Length = 393

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 138/283 (48%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL  +RH+++ G  R DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLW
Sbjct: 111 QQYLQQVRHILQHGHRREDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLW 170

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F++G +N   L   GV IWD                ++G+LGP+YG QWR +        
Sbjct: 171 FIKGSTNAKELSAKGVKIWDANGSREFLDKQGFSTREEGDLGPVYGFQWRHFGAEYKDMH 230

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    +DQ+  ++++++ +P  RR I+ AWN   I  MALPPCH L QFYV NG+LSC
Sbjct: 231 TDYSNQGVDQLQKVIETIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSC 290

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E   +QL 
Sbjct: 291 QLYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQ 350

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P++ I   I D+ +F+ EDF +  Y PH  I  +++V
Sbjct: 351 REPRPFPKLKILREIKDISNFKAEDFQIEDYNPHPPIKMEMAV 393



 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 37  DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD----------- 85
           + S  FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD               
Sbjct: 31  NESNQFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSAKGVKIWDANGSREFLDKHRFST 90

Query: 86  -KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
            +DG+LGP+     R  P  +   + Q+  I+Q
Sbjct: 91  REDGDLGPVXXXXXRPEPG-EQQYLQQVRHILQ 122


>gi|326316306|ref|YP_004233978.1| thymidylate synthase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373142|gb|ADX45411.1| thymidylate synthase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 279

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 160/269 (59%), Positives = 195/269 (72%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GTRS FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF
Sbjct: 11  QYEDFMRHVYTHGIAKGDRTGTGTRSVFGHQMRFDLNEGFPLVTTKKVHLKSIITELLWF 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G S+  +L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS +V++LR +
Sbjct: 71  LTGSSSNHWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISQVVETLRTN 130

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA +DKMAL PCH  FQFYV         G+LSCQLYQRS D+FLG+P
Sbjct: 131 PDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPPQAAGERGRLSCQLYQRSADIFLGVP 190

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A       G+FI T GD H+Y+NHFEQ +LQL+R+P   P + I   
Sbjct: 191 FNIASYALLTHMMAQQCNLDVGDFIWTGGDCHIYSNHFEQVELQLARAPHPYPTLHILRR 250

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              L  +R+EDF +R Y  H AI A V+V
Sbjct: 251 PDSLFDYRFEDFEVRDYAHHPAIKAPVAV 279


>gi|184200215|ref|YP_001854422.1| thymidylate synthase [Kocuria rhizophila DC2201]
 gi|183580445|dbj|BAG28916.1| thymidylate synthase [Kocuria rhizophila DC2201]
          Length = 273

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 150/266 (56%), Positives = 189/266 (71%), Gaps = 5/266 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GT S FG Q+R+DLS  FPLLTTK+VH++S+  ELLWFL
Sbjct: 8   YEDLLRDVLEHGTPKTDRTGTGTLSVFGRQIRYDLSHSFPLLTTKRVHFRSLALELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            G SNV +L   GVSIWDEWAD++G+LGP+YGVQWRSWP   G  IDQI+ +V+S+R  P
Sbjct: 68  SGSSNVRWLQERGVSIWDEWADENGDLGPVYGVQWRSWPAGHGETIDQIARVVESIRTTP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVFLGIPFNI 178
            SRRHIV+AWN A +D+MALPPCH LFQFYV   +     LSCQLYQRS D+FLG+PFNI
Sbjct: 128 DSRRHIVTAWNPAEVDRMALPPCHALFQFYVQPREDGPDALSCQLYQRSADLFLGVPFNI 187

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           ASY+LLT+M+A       GEF+ T GD H+Y NH EQ   QL+R P   P + +      
Sbjct: 188 ASYALLTVMVAQQCDLVPGEFVWTGGDCHIYTNHLEQVRTQLAREPYPYPTLRLTRRPDS 247

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  +R+EDF +  Y+ H  I A V+V
Sbjct: 248 IFDYRFEDFAVEGYQHHPGIKAPVAV 273


>gi|326917497|ref|XP_003205035.1| PREDICTED: LOW QUALITY PROTEIN: thymidylate synthase-like
           [Meleagris gallopavo]
          Length = 397

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 135/280 (48%), Positives = 177/280 (63%), Gaps = 20/280 (7%)

Query: 5   LDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR 64
           L  +RH+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF++
Sbjct: 118 LQQVRHILQHGXPKEDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWFIK 177

Query: 65  GDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP--------DY 104
           G +N   L   GV IWD              + ++G+LGP+YG QWR +         DY
Sbjct: 178 GSTNAKELSAKGVKIWDANGSREFLDKQGFCSREEGDLGPVYGFQWRHFGAEYKDMHTDY 237

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
               +DQ+  +++ ++ +P  RR I+ AWN   I  MALPPCH L QFYV NG+LSCQLY
Sbjct: 238 SNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQLY 297

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E   +QL R P
Sbjct: 298 QRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQREP 357

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R LP++ I   + D+  F+ EDF +  Y PH  I  +++V
Sbjct: 358 RPLPKLKILRKVEDISDFKAEDFQIEDYNPHPPIKMEMAV 397


>gi|118617725|ref|YP_906057.1| thymidylate synthase [Mycobacterium ulcerans Agy99]
 gi|166231717|sp|A0PQG7|TYSY_MYCUA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|118569835|gb|ABL04586.1| thymidylate synthase ThyA [Mycobacterium ulcerans Agy99]
          Length = 266

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 162/261 (62%), Positives = 198/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG Q+R+DL  GFPLLTTKKVH+KSVV+ELLWFL
Sbjct: 7   YEDLLRRVLETGTAKSDRTGTGTRSLFGQQIRYDLGCGFPLLTTKKVHFKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L +HGV+IWDEWA + G+LGPIYGVQWRSWP   G  IDQIS+ ++ LR DP
Sbjct: 67  RGDSNVGWLQQHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISAALELLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGQIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ   QL R PR  P++ ++     +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVTEQLRREPRPYPKLSLSQR-DSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  ++ Y+PH AI A V+V
Sbjct: 246 YEDVVVQDYDPHPAIKAPVAV 266


>gi|168335169|ref|ZP_02693275.1| thymidylate synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 259

 Score =  374 bits (960), Expect = e-102,   Method: Composition-based stats.
 Identities = 146/264 (55%), Positives = 196/264 (74%), Gaps = 5/264 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+++++  G  + DRTGVGT STFGYQMRF+L++GFPL+T K+ ++K + HELL
Sbjct: 1   MKQYKDLVQYIMDNGVYKEDRTGVGTISTFGYQMRFNLAEGFPLVTLKRTYFKGIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL    V IWDEWAD++G+LGP+YG QWRS+       +DQI+ +++ ++
Sbjct: 61  WFLSGXTNIKYLVDKNVHIWDEWADENGDLGPVYGAQWRSFS-----GVDQIAHVIEEIK 115

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++P SRR IV+AWNV  I+KMALPPCH  FQFYV  GKLSCQ+YQRS D FLG+PFNIAS
Sbjct: 116 SNPDSRRLIVTAWNVPEIEKMALPPCHMFFQFYVAEGKLSCQMYQRSADTFLGVPFNIAS 175

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLL  M+A+V   + G+F+HT+GD H+Y NH +Q  L L R P++LP++ I   +  + 
Sbjct: 176 YSLLVHMIAAVTDLEVGDFVHTIGDAHIYTNHLQQVKLMLKREPKSLPKIRILRKVDSIF 235

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRYEDF L  Y PH AI A+V+V
Sbjct: 236 DFRYEDFELLDYNPHKAIKAEVAV 259


>gi|319792495|ref|YP_004154135.1| thymidylate synthase [Variovorax paradoxus EPS]
 gi|315594958|gb|ADU36024.1| thymidylate synthase [Variovorax paradoxus EPS]
          Length = 280

 Score =  374 bits (960), Expect = e-102,   Method: Composition-based stats.
 Identities = 154/269 (57%), Positives = 190/269 (70%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY D +RHV   G  + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH KS++ ELLWF
Sbjct: 12  QYEDFMRHVDTHGVFKSDRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLKSIIQELLWF 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G SN ++L   GV+IWDEWA +DG+LGP+YGVQWRSWP  DG  IDQIS ++++L+ +
Sbjct: 72  LTGSSNNNWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQISDVIKTLKTN 131

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + KMAL PCH  FQFYV         GKLSCQLYQRS D+FLG+P
Sbjct: 132 PDSRRIIVSAWNVAELSKMALMPCHAFFQFYVAPPQAEGERGKLSCQLYQRSADIFLGVP 191

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A       G+FI T GD H+Y+NH EQ  LQLSR P   P + I   
Sbjct: 192 FNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHAEQVKLQLSRDPYPYPTLNIKRK 251

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  ++YEDF +  Y+    I A V+V
Sbjct: 252 PDSIFDYQYEDFEVLDYKHGDPIKAPVAV 280


>gi|308235845|ref|ZP_07666582.1| thymidylate synthase [Gardnerella vaginalis ATCC 14018]
 gi|311114431|ref|YP_003985652.1| thymidylate synthase [Gardnerella vaginalis ATCC 14019]
 gi|310945925|gb|ADP38629.1| thymidylate synthase [Gardnerella vaginalis ATCC 14019]
          Length = 290

 Score =  374 bits (960), Expect = e-102,   Method: Composition-based stats.
 Identities = 150/265 (56%), Positives = 190/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG Q+RFDLSK FPL+TTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILMEGTLKSDRTGTGTISLFGQQIRFDLSKSFPLITTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119
           +G SNV +L  +GV IWDEWAD++G+LGP+YGVQWRSWP          IDQI+++++ +
Sbjct: 87  KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTQENPNRTIDQIANVMELI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNHPDSRRMIVSAWNPAEVENMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   PQ+ I      +
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEI-RKADSI 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
            S+ Y DF +  Y+ H  I A V+V
Sbjct: 266 FSYDYSDFKVVDYKHHPTIKAPVAV 290


>gi|297242824|ref|ZP_06926762.1| thymidylate synthase [Gardnerella vaginalis AMD]
 gi|296889035|gb|EFH27769.1| thymidylate synthase [Gardnerella vaginalis AMD]
          Length = 290

 Score =  374 bits (960), Expect = e-102,   Method: Composition-based stats.
 Identities = 148/265 (55%), Positives = 188/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----NVIDQISSIVQSL 119
           +G SNV +L  +GV IWDEWAD++G+LGP+YGVQWRSWP          IDQI++++  +
Sbjct: 87  KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   PQ+ I      +
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEI-RKADSI 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y+ H  I A V+V
Sbjct: 266 FDYDYSDFKVVDYKHHPTIKAPVAV 290


>gi|315122502|ref|YP_004062991.1| thymidylate synthase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495904|gb|ADR52503.1| thymidylate synthase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 264

 Score =  374 bits (960), Expect = e-102,   Method: Composition-based stats.
 Identities = 234/264 (88%), Positives = 249/264 (94%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LLRHVI  GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH KSV++ELL
Sbjct: 1   MRQYLNLLRHVITSGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G SN+SYLH+HGVSIWDEWA KDG+LGPIYGVQWRSWPDYDGN IDQISSI++SLR
Sbjct: 61  WFLKGGSNISYLHQHGVSIWDEWASKDGDLGPIYGVQWRSWPDYDGNTIDQISSIIRSLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD+GKLSCQLYQRSGDVFLGIPFNIAS
Sbjct: 121 TDPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDDGKLSCQLYQRSGDVFLGIPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLTMMLASVIGF+YGEFIHTLGDVHLYNNHFEQA LQLSRSP+  P MIINPN+VDL 
Sbjct: 181 YSLLTMMLASVIGFRYGEFIHTLGDVHLYNNHFEQAHLQLSRSPKKTPHMIINPNVVDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SF+YEDFTL SYEPHAAI AKV+V
Sbjct: 241 SFQYEDFTLESYEPHAAIPAKVTV 264


>gi|296274222|ref|YP_003656853.1| thymidylate synthase [Arcobacter nitrofigilis DSM 7299]
 gi|296098396|gb|ADG94346.1| thymidylate synthase [Arcobacter nitrofigilis DSM 7299]
          Length = 287

 Score =  374 bits (960), Expect = e-102,   Method: Composition-based stats.
 Identities = 153/287 (53%), Positives = 198/287 (68%), Gaps = 23/287 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++HV++ G+ + DRTG GT+S FGYQMRFDLS+GFPL+TTKK H K+++ ELL
Sbjct: 1   MKQYLDLMKHVLENGTLKEDRTGTGTKSVFGYQMRFDLSEGFPLVTTKKCHLKAIISELL 60

Query: 61  WFLRGDSNVSYLHRH-----------GVSIWDEWADKDG------------ELGPIYGVQ 97
           WFL G ++   L                ++W   AD  G            ELGP+YG Q
Sbjct: 61  WFLEGSTDERRLAEIHYGDKAENIIGKKTVWTANADNQGVALGYENSDTVKELGPVYGSQ 120

Query: 98  WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
           WRSW   DG  IDQ+S +++ ++ +P SRR I+SAWNVA I+KMALPPCH  FQFYV NG
Sbjct: 121 WRSWKTNDGKAIDQVSELIEQIKNNPDSRRLILSAWNVAEIEKMALPPCHTFFQFYVANG 180

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           KLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V   + G+F+HT GD HLY+NH EQA+
Sbjct: 181 KLSCQLYQRSADIFLGVPFNIASYALLTMMVAQVCDLEVGDFVHTFGDAHLYSNHLEQAN 240

Query: 218 LQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           LQ++R P   P M INP+I ++  F+ EDF L +Y+ H  I   ++V
Sbjct: 241 LQITREPFPKPTMKINPDIKNIFDFKMEDFELSNYQAHEHIKGVMAV 287


>gi|315444918|ref|YP_004077797.1| thymidylate synthase [Mycobacterium sp. Spyr1]
 gi|315263221|gb|ADT99962.1| thymidylate synthase [Mycobacterium sp. Spyr1]
          Length = 266

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 160/261 (61%), Positives = 198/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 7   YEDLLRLVLDTGTPKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV+IWDEWA   G+LGP+YGVQWRSWP   G  IDQIS+ +  L+ DP
Sbjct: 67  RGDSNVRWLQERGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGEHIDQISAALDLLKHDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ   QLSR PR  P++++ P    +  + 
Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAPR-DSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++YEPH AI A V++
Sbjct: 246 YEDVVIKNYEPHPAIKAPVAI 266


>gi|294084290|ref|YP_003551048.1| thymidylate synthase protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663863|gb|ADE38964.1| thymidylate synthase protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 264

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 202/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G DR DRTG GTR+ FG+QMRFDL+ GFP+LTTKK+H KS++HELL
Sbjct: 1   MQQYLDLLARVMDEGIDRDDRTGTGTRAVFGHQMRFDLADGFPVLTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR W   DG  IDQ++ +++ +R
Sbjct: 61  WFISGDTNIRYLQDNGVSIWDEWADENGDLGPVYGQQWRRWKTPDGAEIDQLAELIRMIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR ++SAWN A I  MALPPCHCLFQF V +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 ETPTSRRLMLSAWNPADIPNMALPPCHCLFQFQVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A +   + G F+HTLGD H+Y NHF+QA LQL+R+P  LP+++I+    D+ 
Sbjct: 181 YALLTHMIAVICDLEAGTFVHTLGDAHIYANHFDQARLQLTRTPGALPKLLIHNRPKDID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDF +  Y   A I A ++V
Sbjct: 241 GFKFEDFEIIDYNAQAHISAPIAV 264


>gi|154507538|ref|ZP_02043180.1| hypothetical protein ACTODO_00017 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799327|gb|EDN81747.1| hypothetical protein ACTODO_00017 [Actinomyces odontolyticus ATCC
           17982]
          Length = 267

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 149/263 (56%), Positives = 191/263 (72%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY DLL  +++ G+ + DRTG GTRS FG Q+R+DLSKGFPL+TTK+VH KSVV ELLW
Sbjct: 6   RQYEDLLARIMREGTPKGDRTGTGTRSLFGAQLRYDLSKGFPLITTKRVHLKSVVGELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL G SNVS+L  +G+ IW+EWADKDGELGP+YGVQWRSW   DG  IDQIS ++++L+ 
Sbjct: 66  FLSGSSNVSWLQDNGIRIWNEWADKDGELGPVYGVQWRSWNAGDGRHIDQISQVLETLKT 125

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR +VSAWNV  + +MAL PCH  FQ YV +G+LS QLYQRS D+FLG+PFNIASY
Sbjct: 126 NPDSRRMVVSAWNVGDLPQMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASY 185

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           SLLT M A   G + G+FI T GD H+Y+NH EQ   QLSR P   P++ +      +  
Sbjct: 186 SLLTHMFAQQAGLEVGDFIWTGGDCHIYSNHTEQVTEQLSREPYPFPRLELA-KAPSMFE 244

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + ++D ++  Y+ H  I A V+V
Sbjct: 245 YSFDDISVMDYQHHPTIKAPVAV 267


>gi|213964887|ref|ZP_03393086.1| thymidylate synthase [Corynebacterium amycolatum SK46]
 gi|213952423|gb|EEB63806.1| thymidylate synthase [Corynebacterium amycolatum SK46]
          Length = 278

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 160/261 (61%), Positives = 200/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GTRS FG Q+RFDLS+GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 19  YEDLLREILADGAAKSDRTGTGTRSVFGRQLRFDLSEGFPLITTKKVHLKSIVYELLWFL 78

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV+IWDEWAD DG+LGP+YGVQWRSWP  DG+ IDQI+  +++L+++P
Sbjct: 79  RGDSNVRWLQDRGVTIWDEWADDDGDLGPVYGVQWRSWPTPDGHHIDQIAQALETLKSNP 138

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 139 DSRRNIVSAWNVSEISNMALPPCHLLFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 198

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   GEFI T GD H+Y+NH EQ +LQ+SR PR  P + +      +  + 
Sbjct: 199 LTHMMAQQAGLDVGEFIWTGGDCHIYDNHIEQCELQVSREPRPYPTLKL-RKADSIFDYA 257

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +  Y+PH  I  +V+V
Sbjct: 258 YEDIEVIGYDPHPLIRGQVAV 278


>gi|296171672|ref|ZP_06852886.1| thymidylate synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894033|gb|EFG73796.1| thymidylate synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 270

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 160/261 (61%), Positives = 200/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG+Q+R+DLS GFPLLTTKKVH KSVV+ELLWFL
Sbjct: 11  YEDLLRLVLERGTAKSDRTGTGTRSLFGHQLRYDLSAGFPLLTTKKVHLKSVVYELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV++LH HGV+IWDEWA + G+LGPIYGVQWRSWP   G  +DQIS+ ++ LR DP
Sbjct: 71  RGDSNVAWLHEHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHVDQISAALELLRTDP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +M LPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 131 NSRRIIVSAWNVGEIPQMVLPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ   QL R PR  P++++      +  + 
Sbjct: 191 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRTQLGREPRPYPELVLAQR-DSIFDYT 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y+D  +++Y+PH AI A V+V
Sbjct: 250 YDDVVIKNYDPHPAIKAPVAV 270


>gi|145224587|ref|YP_001135265.1| thymidylate synthase [Mycobacterium gilvum PYR-GCK]
 gi|189036939|sp|A4TCI9|TYSY_MYCGI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145217073|gb|ABP46477.1| thymidylate synthase [Mycobacterium gilvum PYR-GCK]
          Length = 266

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 160/261 (61%), Positives = 198/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 7   YEDLLRLVLDTGTPKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV+IWDEWA   G+LGP+YGVQWRSWP   G  IDQIS+ +  L+ DP
Sbjct: 67  RGDSNVRWLQERGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGEHIDQISAALDLLKRDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ   QLSR PR  P++++ P    +  + 
Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAPR-DSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++YEPH AI A V++
Sbjct: 246 YEDVVIKNYEPHPAIKAPVAI 266


>gi|319442559|ref|ZP_07991715.1| thymidylate synthase [Corynebacterium variabile DSM 44702]
          Length = 270

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/261 (59%), Positives = 200/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  +++ G  + DRTG GTRS F  QMRFDL++GFPL+TTKKVH  S+V ELLWFL
Sbjct: 11  YEDLLAEILEHGVHKDDRTGTGTRSLFARQMRFDLAEGFPLITTKKVHLHSIVGELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSN+++LH + VSIWDEWAD+DGELGP+YGVQWRSWP  DG  IDQI++ +++L+ +P
Sbjct: 71  RGDSNIAWLHENKVSIWDEWADEDGELGPVYGVQWRSWPTPDGRHIDQITAALETLKNNP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY++
Sbjct: 131 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAI 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEF+ T GD H+Y+NH +Q  LQLSR  R  P + ++    DL S+R
Sbjct: 191 LTHMFAQQAGLEVGEFVWTGGDCHIYDNHVDQVALQLSREARPYPTLNLH-KAADLFSYR 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y+PH  I A V+V
Sbjct: 250 FDDIEVIGYDPHPGIKAPVAV 270


>gi|293189215|ref|ZP_06607938.1| thymidylate synthase [Actinomyces odontolyticus F0309]
 gi|292821678|gb|EFF80614.1| thymidylate synthase [Actinomyces odontolyticus F0309]
          Length = 267

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 148/263 (56%), Positives = 190/263 (72%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY DLL  +++ G+ + DRTG GTRS FG Q+R+DLSKGFPL+TTK+VH KSVV ELLW
Sbjct: 6   RQYEDLLARIMREGTPKGDRTGTGTRSLFGAQLRYDLSKGFPLITTKRVHLKSVVGELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL G SNVS+L  +G+ IW+EWAD+DGELGP+YGVQWRSW   DG  IDQIS ++++L+ 
Sbjct: 66  FLSGSSNVSWLQDNGIRIWNEWADEDGELGPVYGVQWRSWNAGDGRHIDQISQVLETLKT 125

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR +VSAWNV  + +MAL PCH  FQ YV +G+LS QLYQRS D+FLG+PFNIASY
Sbjct: 126 NPDSRRMVVSAWNVGDLPQMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASY 185

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           SLLT M A   G + G+FI T GD H+Y+NH EQ   QLSR P   P++ +      +  
Sbjct: 186 SLLTHMFAQQAGLEVGDFIWTGGDCHIYSNHTEQVTEQLSREPYPFPRLELA-KAPSMFE 244

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + ++D ++  Y  H  I A V+V
Sbjct: 245 YSFDDISVTDYRHHPTIKAPVAV 267


>gi|148823952|ref|YP_001288706.1| thymidylate synthase [Mycobacterium tuberculosis F11]
 gi|254551823|ref|ZP_05142270.1| thymidylate synthase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|289553451|ref|ZP_06442661.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 605]
 gi|289762936|ref|ZP_06522314.1| thymidylate synthase thyA [Mycobacterium tuberculosis GM 1503]
 gi|297635373|ref|ZP_06953153.1| thymidylate synthase [Mycobacterium tuberculosis KZN 4207]
 gi|148722479|gb|ABR07104.1| thymidylate synthase thyA [Mycobacterium tuberculosis F11]
 gi|289438083|gb|EFD20576.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 605]
 gi|289710442|gb|EFD74458.1| thymidylate synthase thyA [Mycobacterium tuberculosis GM 1503]
 gi|328457927|gb|AEB03350.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 4207]
          Length = 263

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 166/264 (62%), Positives = 201/264 (76%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELL
Sbjct: 1   MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGDSN+ +LH HGV+IWDEWA   GELGPIYGVQWRSWP   G  IDQIS+ +  LR
Sbjct: 61  WFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  I++MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 TDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A+  G   GEFI   GD H+Y+NH EQ  LQLSR PR  P++++  +   + 
Sbjct: 181 YALLTHMMAAQAGLSVGEFIWAGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIF 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + YED  +++Y+PH AI A V+V
Sbjct: 240 EYTYEDIVVKNYDPHPAIKAPVAV 263


>gi|29654838|ref|NP_820530.1| thymidylate synthase [Coxiella burnetii RSA 493]
 gi|161831612|ref|YP_001597383.1| thymidylate synthase [Coxiella burnetii RSA 331]
 gi|165919218|ref|ZP_02219304.1| thymidylate synthase [Coxiella burnetii RSA 334]
 gi|62901362|sp|Q83BG2|TYSY_COXBU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036931|sp|A9KF61|TYSY_COXBN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036932|sp|A9N980|TYSY_COXBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|29542106|gb|AAO91044.1| thymidylate synthase [Coxiella burnetii RSA 493]
 gi|161763479|gb|ABX79121.1| thymidylate synthase [Coxiella burnetii RSA 331]
 gi|165917079|gb|EDR35683.1| thymidylate synthase [Coxiella burnetii RSA 334]
          Length = 264

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 149/264 (56%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+ ++  G  + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL
Sbjct: 1   MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W   DG  +DQ+  +++ ++
Sbjct: 61  WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A     + GEFI + GD H+YN H +Q   QLSR PR LPQ+IIN +   L 
Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + + DF++ +Y PH AI A V+V
Sbjct: 241 DYNFNDFSIVNYHPHPAIKAPVAV 264


>gi|15842302|ref|NP_337339.1| thymidylate synthase [Mycobacterium tuberculosis CDC1551]
 gi|215404733|ref|ZP_03416914.1| thymidylate synthase [Mycobacterium tuberculosis 02_1987]
 gi|215412578|ref|ZP_03421306.1| thymidylate synthase [Mycobacterium tuberculosis 94_M4241A]
 gi|215431705|ref|ZP_03429624.1| thymidylate synthase [Mycobacterium tuberculosis EAS054]
 gi|215447016|ref|ZP_03433768.1| thymidylate synthase [Mycobacterium tuberculosis T85]
 gi|260187781|ref|ZP_05765255.1| thymidylate synthase [Mycobacterium tuberculosis CPHL_A]
 gi|260201893|ref|ZP_05769384.1| thymidylate synthase [Mycobacterium tuberculosis T46]
 gi|260206075|ref|ZP_05773566.1| thymidylate synthase [Mycobacterium tuberculosis K85]
 gi|294994142|ref|ZP_06799833.1| thymidylate synthase [Mycobacterium tuberculosis 210]
 gi|306777045|ref|ZP_07415382.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu001]
 gi|306780947|ref|ZP_07419284.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu002]
 gi|306785575|ref|ZP_07423897.1| thymidylate synthase [Mycobacterium tuberculosis SUMu003]
 gi|306790170|ref|ZP_07428492.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu004]
 gi|306798672|ref|ZP_07436974.1| thymidylate synthase [Mycobacterium tuberculosis SUMu006]
 gi|306807432|ref|ZP_07444100.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu007]
 gi|306968827|ref|ZP_07481488.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu009]
 gi|306973160|ref|ZP_07485821.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu010]
 gi|307080869|ref|ZP_07490039.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu011]
 gi|13882597|gb|AAK47153.1| thymidylate synthase [Mycobacterium tuberculosis CDC1551]
 gi|308214556|gb|EFO73955.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu001]
 gi|308326203|gb|EFP15054.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu002]
 gi|308329758|gb|EFP18609.1| thymidylate synthase [Mycobacterium tuberculosis SUMu003]
 gi|308333365|gb|EFP22216.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu004]
 gi|308341052|gb|EFP29903.1| thymidylate synthase [Mycobacterium tuberculosis SUMu006]
 gi|308346162|gb|EFP35013.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu007]
 gi|308353578|gb|EFP42429.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu009]
 gi|308357422|gb|EFP46273.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu010]
 gi|308361374|gb|EFP50225.1| thymidylate synthase thyA [Mycobacterium tuberculosis SUMu011]
 gi|323718611|gb|EGB27775.1| thymidylate synthase thyA [Mycobacterium tuberculosis CDC1551A]
          Length = 266

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 166/261 (63%), Positives = 201/261 (77%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELLWFL
Sbjct: 7   YEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSN+ +LH HGV+IWDEWA   GELGPIYGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I++MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ  LQLSR PR  P++++  +   +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIFEYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++Y+PH AI A V+V
Sbjct: 246 YEDIVVKNYDPHPAIKAPVAV 266


>gi|183981970|ref|YP_001850261.1| thymidylate synthase ThyA [Mycobacterium marinum M]
 gi|183175296|gb|ACC40406.1| thymidylate synthase ThyA [Mycobacterium marinum M]
          Length = 266

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG Q+R+DL  GFPLLTTKKVH+KSVV+ELLWFL
Sbjct: 7   YEDLLRRVLETGTAKSDRTGTGTRSLFGQQIRYDLGCGFPLLTTKKVHFKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L +HGV+IWDEWA + G+LGPIYGVQWRSWP   G  IDQIS+ ++ LR DP
Sbjct: 67  RGDSNVGWLQQHGVTIWDEWASETGDLGPIYGVQWRSWPTPSGEHIDQISAALELLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGQIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y NH EQ   QL R PR  P++ ++     +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFIWTGGDCHIYGNHVEQVTEQLRREPRPYPKLSLSQR-DSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  ++ Y+PH AI A V+V
Sbjct: 246 YEDVVVQDYDPHPAIKAPVAV 266


>gi|329889820|ref|ZP_08268163.1| thymidylate synthase [Brevundimonas diminuta ATCC 11568]
 gi|328845121|gb|EGF94685.1| thymidylate synthase [Brevundimonas diminuta ATCC 11568]
          Length = 285

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 164/262 (62%), Positives = 198/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+LLR ++  G  R DRTG GT   FG QMRFDLSKGFPLLTTKK+H +S+  ELLWF
Sbjct: 25  QYLNLLRDILDNGVRRDDRTGTGTLGVFGRQMRFDLSKGFPLLTTKKLHTRSIFIELLWF 84

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG++N+++L  +GVSIWDEWAD DG+LGP+YG QWRSW   +G  IDQI  +V  L+ +
Sbjct: 85  LRGETNIAWLKDNGVSIWDEWADADGDLGPVYGKQWRSWAAPNGASIDQIQKLVHGLKTN 144

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRRHIVSAWN A +D MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 145 PNSRRHIVSAWNPADVDDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASYA 204

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT MLA V+G + G+F+HT GD HLY NH EQA+LQLSR+P  LP + +  +  DL  F
Sbjct: 205 LLTYMLAKVVGLEPGDFVHTFGDAHLYLNHLEQAELQLSRAPLPLPTLSVA-DKDDLFGF 263

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
              DF L  Y+    I A V+V
Sbjct: 264 ELSDFVLNDYQSWPHIKAPVAV 285


>gi|148705312|gb|EDL37259.1| thymidylate synthase, isoform CRA_a [Mus musculus]
          Length = 318

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 37  QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 96

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 97  IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 156

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 157 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 216

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 217 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 276

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 277 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 318


>gi|271966278|ref|YP_003340474.1| Thymidylate synthase [Streptosporangium roseum DSM 43021]
 gi|270509453|gb|ACZ87731.1| Thymidylate synthase [Streptosporangium roseum DSM 43021]
          Length = 265

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 161/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLR V+  G+ + DRTG GTRS FG+Q+R+DLS+GFPL+TTKKVH +S+V+ELLWF
Sbjct: 5   QYEDLLRLVLTSGTAKADRTGTGTRSVFGHQLRYDLSQGFPLVTTKKVHLRSIVYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSN+ +LH+HGV+IWDEWAD +GELGP+YG QWRSWP  DG  IDQ+S ++ +LR D
Sbjct: 65  LRGDSNIGWLHKHGVTIWDEWADANGELGPVYGAQWRSWPAPDGRHIDQVSEVLDTLRRD 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA +DKMAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRMIVSAWNVAELDKMALAPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A   G + G+FI T GD H+Y+NH EQ   QLSR+P   P + +      L  +
Sbjct: 185 LLTHMVAQQAGLKPGDFIWTGGDCHIYDNHVEQVTEQLSRTPFEFPGLRL-RQADSLFDY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            Y D  +  Y  H AI A V+V
Sbjct: 244 AYADVEVLDYRHHPAIKAPVAV 265


>gi|84496920|ref|ZP_00995774.1| thymidylate synthase [Janibacter sp. HTCC2649]
 gi|84383688|gb|EAP99569.1| thymidylate synthase [Janibacter sp. HTCC2649]
          Length = 263

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 168/264 (63%), Positives = 205/264 (77%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL  ++  G D+ DRTG GTRS FG+QMRFDLS GFP++TTKKVH KS++ ELL
Sbjct: 1   MRQYHDLLNRILDEGVDKSDRTGTGTRSVFGHQMRFDLSDGFPVVTTKKVHLKSIIGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L   G+SIWDEWAD++G+LGP+YG QWRSWP  DG  +DQI+ +++ +R
Sbjct: 61  WFLRGDTNVRWLQERGISIWDEWADENGDLGPVYGHQWRSWPTPDGRQVDQIAKVIEGIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRRHIVSAWNVA +D MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHALFQFYVSDGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A +   + GEF+HTLGD HLY+NH EQA LQL+R PR LP M I P    + 
Sbjct: 181 YALLTMMVAQLTDLEPGEFVHTLGDAHLYSNHLEQARLQLTREPRDLPTMRIAPK-TAID 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F  +DF L  Y+PH  I A ++V
Sbjct: 240 DFDLDDFELVGYDPHPGIKAPIAV 263


>gi|227546560|ref|ZP_03976609.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|227212877|gb|EEI80756.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC
           55813]
          Length = 290

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 151/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP          IDQIS+++  +
Sbjct: 87  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P + I      L
Sbjct: 207 SYSLLTMMMAQQTGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEI-RKADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290


>gi|297153967|gb|ADI03679.1| thymidylate synthase [Streptomyces bingchenggensis BCW-1]
          Length = 265

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 160/262 (61%), Positives = 198/262 (75%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLR V+  G+ + DRTG GTRS FG+Q+R+DL++GFPL+TTKKVH +S+V+ELLWF
Sbjct: 5   QYEDLLRLVLTSGTAKADRTGTGTRSVFGHQLRYDLAQGFPLITTKKVHLRSIVYELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  HG++IWDEWAD +GELGP+YGVQWRSWP  DG  IDQIS ++ +LR D
Sbjct: 65  LRGDSNVGWLREHGITIWDEWADANGELGPVYGVQWRSWPAPDGRHIDQISQVLDTLRRD 124

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNVA + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+
Sbjct: 125 PDSRRMIVSAWNVAELPKMALAPCHALFQFYVADGKLSCQLYQRSADLFLGVPFNIASYA 184

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A   G + G+F+ T GD H+Y+NH +Q   QLSR+P   P + +      L ++
Sbjct: 185 LLTHMVAQQAGLEPGDFVWTGGDCHIYDNHIKQVTEQLSRTPFEFPGLRL-RQADSLFAY 243

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            Y D  L  Y  H AI A V+V
Sbjct: 244 AYADVELLDYRHHPAIKAPVAV 265


>gi|296222340|ref|XP_002757144.1| PREDICTED: thymidylate synthase-like isoform 1 [Callithrix jacchus]
          Length = 313

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYRDMDS 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNGELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFKVEGYNPHPTIKMEMAV 313


>gi|262375002|ref|ZP_06068236.1| thymidylate synthase [Acinetobacter lwoffii SH145]
 gi|262310015|gb|EEY91144.1| thymidylate synthase [Acinetobacter lwoffii SH145]
          Length = 280

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 161/280 (57%), Positives = 200/280 (71%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+H++  G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL
Sbjct: 1   MRQYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + VSIWDEWA           +GELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGASKNADNSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V NGKLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVHNGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V   + G+F+ T GD HLY+NHFEQA LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLEVGDFVWTGGDTHLYSNHFEQAQLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I DL  F++ED  +  YE H  I A V+V
Sbjct: 241 LGLCQLKLNPEIKDLFDFKFEDIEIVGYESHPGIKAPVAV 280


>gi|219883095|ref|YP_002477705.1| thymidylate synthase [Arthrobacter chlorophenolicus A6]
 gi|219862101|gb|ACL42442.1| thymidylate synthase [Arthrobacter chlorophenolicus A6]
          Length = 276

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/269 (57%), Positives = 192/269 (71%), Gaps = 8/269 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  V   G+ + DRTG GT S FG Q+RFDLS+GFPL+ TKKVHW SV +ELLWFL
Sbjct: 8   YEDLLAEVAALGAAKGDRTGTGTTSVFGRQIRFDLSEGFPLIWTKKVHWPSVANELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV +L   GV IWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+S+R +P
Sbjct: 68  RGETNVRWLQERGVKIWDEWADENGDLGPVYGSQWRSWPTPDGGQIDQIANVVESIRNNP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------NGKLSCQLYQRSGDVFLGIPFN 177
            SRRHIV+AWN A +D MALPPCH LFQFYV        GKLSCQLYQRS D+FLG+PFN
Sbjct: 128 NSRRHIVTAWNPAEVDNMALPPCHALFQFYVAPGTDGGPGKLSCQLYQRSADMFLGVPFN 187

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPN 235
           IASY+LLT M+A   G   GEFI T GDVH+Y+NH +Q   QL R    R  P++  N  
Sbjct: 188 IASYALLTHMVAQQTGLDVGEFIWTGGDVHIYDNHTDQVAEQLGRLDEVRAYPELKFNRV 247

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  + +EDF +  Y+PH  I A V+V
Sbjct: 248 PDSIFDYTFEDFEVVGYDPHPLIKAPVAV 276


>gi|326384524|ref|ZP_08206204.1| thymidylate synthase [Gordonia neofelifaecis NRRL B-59395]
 gi|326196869|gb|EGD54063.1| thymidylate synthase [Gordonia neofelifaecis NRRL B-59395]
          Length = 268

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 152/261 (58%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG+QMRFDLS+GFP++TTKKVH KS+++ELLWFL
Sbjct: 9   YEDLLRLVLETGTPKADRTGTGTRSVFGHQMRFDLSEGFPVITTKKVHLKSIIYELLWFL 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV+IWDEWA  +GELGP+YGVQWR+WP   G  +DQI+  +++LR+DP
Sbjct: 69  RGDSNVRWLQDRGVTIWDEWASPEGELGPVYGVQWRNWPTPSGEHVDQIAVALETLRSDP 128

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV  GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 129 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVAGGKLSCQLYQRSADLFLGVPFNIASYAL 188

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G + G+F+ T GD H+Y+NH EQ   QLSR     P + +      +  + 
Sbjct: 189 LTHMMAQQAGLEVGDFVWTGGDCHIYDNHVEQVREQLSRDALPYPTLRL-RKADSIFDYD 247

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y  H AI A V+V
Sbjct: 248 FDDVEVVDYHSHPAIKAPVAV 268


>gi|218754505|ref|ZP_03533301.1| thymidylate synthase [Mycobacterium tuberculosis GM 1503]
 gi|253798154|ref|YP_003031155.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 1435]
 gi|297732371|ref|ZP_06961489.1| thymidylate synthase [Mycobacterium tuberculosis KZN R506]
 gi|313659703|ref|ZP_07816583.1| thymidylate synthase [Mycobacterium tuberculosis KZN V2475]
 gi|253319657|gb|ACT24260.1| thymidylate synthase thyA [Mycobacterium tuberculosis KZN 1435]
          Length = 266

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 165/261 (63%), Positives = 200/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG QMR+DLS GFPLLTTKKVH+KSV +ELLWFL
Sbjct: 7   YEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSN+ +LH HGV+IWDEWA   GELGPIYGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I++MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI   GD H+Y+NH EQ  LQLSR PR  P++++  +   +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFIWAGGDCHIYDNHVEQVRLQLSREPRPYPKLLLA-DRDSIFEYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++Y+PH AI A V+V
Sbjct: 246 YEDIVVKNYDPHPAIKAPVAV 266


>gi|332879843|ref|ZP_08447532.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332682220|gb|EGJ55128.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 274

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 166/277 (59%), Positives = 207/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLLRH++  G  + DRTG GT S FGYQMRFDL++GFPL+TTKK+H KSV++ELL
Sbjct: 1   MKIYQDLLRHILANGYSKDDRTGTGTTSVFGYQMRFDLNEGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ HGV IW+EWAD +G+LGP+YG QWR+W   +G  IDQ+ ++V +L+
Sbjct: 61  WFLKGDTNIGYLNEHGVRIWNEWADPNGDLGPVYGAQWRNW---NGEAIDQLKAVVDTLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH LFQFYV +GKLSCQLYQRS
Sbjct: 118 HNPESRRIIVSAWNPSVLPDTRKSFAENVANGKAALPPCHALFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+LLTMMLA V   Q G+F+HT GDVH+YNNH EQ  LQLSR+PR L
Sbjct: 178 ADVFLGVPFNIASYALLTMMLAQVCDLQLGDFVHTFGDVHIYNNHREQVALQLSRTPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +F Y DF L  Y+P+  I A V+V
Sbjct: 238 PTMHLNPAVKDLFAFNYTDFRLEGYDPYPTIKAAVAV 274


>gi|227487755|ref|ZP_03918071.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227542399|ref|ZP_03972448.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227092257|gb|EEI27569.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227181597|gb|EEI62569.1| thymidylate synthase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 266

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 160/261 (61%), Positives = 196/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ G+ + DRTG GT S FG QMRF L++ FPL+TTKKVHWKSVV ELLWFL
Sbjct: 7   YEDLLREILEEGAHKDDRTGTGTTSLFGKQMRFHLAEAFPLITTKKVHWKSVVGELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV++LH +GVSIWDEWAD++GELGPIYGVQWRSWP  +G  IDQI+  ++ L+ DP
Sbjct: 67  RGDSNVAWLHENGVSIWDEWADENGELGPIYGVQWRSWPTPNGQHIDQIAGALELLKKDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 127 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVADGKLSCQLYQRSCDMFLGVPFNIASYSL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G   G+F+ T GD H+Y+NH EQ   QLSR PR  P++ +      +  + 
Sbjct: 187 LTHMFAQQAGLDVGDFVWTGGDCHIYDNHREQVREQLSREPRPYPRLDLTRAP-SMFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +E   L  Y+PH  I A V+V
Sbjct: 246 FEHINLVGYDPHPTIKAPVAV 266


>gi|311064820|ref|YP_003971546.1| thymidylate synthase [Bifidobacterium bifidum PRL2010]
 gi|310867140|gb|ADP36509.1| ThyA Thymidylate synthase [Bifidobacterium bifidum PRL2010]
          Length = 290

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 149/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119
           +G SNV +L  H V IWD+WAD++G+LGP+YGVQWRSWP          IDQI +++  +
Sbjct: 87  KGSSNVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIGNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIA
Sbjct: 147 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   P++ I      L
Sbjct: 207 SYSLLTMMIAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEI-RKADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDFT+  Y  H  I A V+V
Sbjct: 266 FDYQYEDFTIVDYRHHPTIKAPVAV 290


>gi|238898972|ref|YP_002924654.1| thymidylate synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259550788|sp|C4K7G3|TYSY_HAMD5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|229466732|gb|ACQ68506.1| thymidylate synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 264

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++ V+  G+++ DRTG GT S FG+QMRF+L +GFPL+TTKK H +S++HELL
Sbjct: 1   MKQYLHLMKKVLNEGTEKEDRTGTGTVSIFGHQMRFNLKEGFPLVTTKKCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + VSIW+EWADK G LGPIYG QWR+W   DG+ +DQ+S  ++ L+
Sbjct: 61  WFLKGDTNIAYLRENQVSIWEEWADKTGSLGPIYGKQWRAWGTPDGHQVDQLSQTLELLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +DKMAL PCH  FQFYV    LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPDSRRMIVSAWNVGELDKMALAPCHAFFQFYVVKKTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLL  M+A    F  G+F+ T GD+HLY+NH +QA LQL+R PR+LP ++IN     L 
Sbjct: 181 YSLLMHMIAQQCDFFLGDFVWTGGDIHLYSNHLDQAHLQLTREPRSLPHLLINRKPDSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF+L  Y P+ AI A V++
Sbjct: 241 DYHFEDFSLEKYNPYPAIKAPVAI 264


>gi|298253462|ref|ZP_06977254.1| thymidylate synthase [Gardnerella vaginalis 5-1]
 gi|297532857|gb|EFH71743.1| thymidylate synthase [Gardnerella vaginalis 5-1]
          Length = 290

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 148/265 (55%), Positives = 188/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----NVIDQISSIVQSL 119
           +G SNV +L  +GV IWDEWAD++G+LGP+YGVQWRSWP          IDQI++++  +
Sbjct: 87  KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   PQ+ I      +
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEI-RKADSI 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y+ H  I A V+V
Sbjct: 266 FDYDYSDFKVVEYKHHPTIKAPVAV 290


>gi|169630173|ref|YP_001703822.1| thymidylate synthase (ThyA) [Mycobacterium abscessus ATCC 19977]
 gi|169242140|emb|CAM63168.1| Thymidylate synthase (ThyA) [Mycobacterium abscessus]
          Length = 266

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/261 (59%), Positives = 196/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG+Q+R+ L  GFPL+TTKKVH KSV++ELLWFL
Sbjct: 7   YEDLLRLVLEEGTPKADRTGTGTRSVFGHQLRYRLEDGFPLITTKKVHLKSVIYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L   GV+IWDEWA + GELGP+YGVQWR+WP   G  IDQIS+ +  LR +P
Sbjct: 67  RGESNVRWLQERGVTIWDEWASEAGELGPVYGVQWRAWPTPSGEHIDQISAALDLLRTNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   G+F+ T GD H+Y+NH EQ   QLSR P   P +++      +  +R
Sbjct: 187 LTHMMAAQAGLGVGDFVWTGGDCHIYDNHVEQVTEQLSRDPYPYPTLVLAQR-DSIFDYR 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED T+ +Y+ HAAI A V+V
Sbjct: 246 YEDITVENYQHHAAIKAPVAV 266


>gi|189218127|ref|YP_001938769.1| thymidylate synthase [Methylacidiphilum infernorum V4]
 gi|189184985|gb|ACD82170.1| Thymidylate synthase [Methylacidiphilum infernorum V4]
          Length = 275

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 153/264 (57%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL  V+ FG  ++DRTG+GT S FG Q++FDL+ GFPLLTTKK++WK++V+ELL
Sbjct: 12  MQLYLQLLEKVLNFGIPKKDRTGIGTYSLFGEQLKFDLTLGFPLLTTKKLYWKAIVYELL 71

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH++GV+IWDEWAD++G LG IYG QWRSW   +G  +DQI+ ++  ++
Sbjct: 72  WFLKGDTNVAYLHQNGVTIWDEWADENGNLGRIYGAQWRSWRGANGRTVDQIAWVIDQIK 131

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWN A +++MALPPCH LFQFYV    LSC+LYQRS D+FLG+PFNIAS
Sbjct: 132 KDPDSRRLIVSAWNPAELEEMALPPCHVLFQFYVHYPYLSCKLYQRSADIFLGVPFNIAS 191

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A V G    EFIH+ GD+HLY +H  QA LQL R+P+ LP + INP +  + 
Sbjct: 192 YSLLTHLVAQVTGLIPKEFIHSFGDIHLYASHLSQARLQLERTPKALPSLFINPKVKSID 251

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
              +ED  L+ Y+PH  I A V+V
Sbjct: 252 DISFEDIELKGYDPHPPIKAAVAV 275


>gi|154486823|ref|ZP_02028230.1| hypothetical protein BIFADO_00651 [Bifidobacterium adolescentis
           L2-32]
 gi|154084686|gb|EDN83731.1| hypothetical protein BIFADO_00651 [Bifidobacterium adolescentis
           L2-32]
          Length = 266

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 146/265 (55%), Positives = 188/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRF+L + FPLLTTK V +K + +ELLWFL
Sbjct: 3   YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFNLKESFPLLTTKTVFFKGLAYELLWFL 62

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L  H V IWDEWAD++G+LGP+YG QWRSWP    D     IDQIS+++  +
Sbjct: 63  KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 123 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G + GEF+ T GD H+Y+NH +Q   QLSR+P   PQ+ I      L
Sbjct: 183 SYSLLTLMMAQQTGLEPGEFVWTGGDCHVYDNHIDQVLEQLSRTPYPYPQIRI-RKADSL 241

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF + +Y+ H  I A V+V
Sbjct: 242 FDYDYSDFEIVNYQHHPTIKAPVAV 266


>gi|322689847|ref|YP_004209581.1| thymidylate synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|320461183|dbj|BAJ71803.1| thymidylate synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 290

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 151/265 (56%), Positives = 189/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP          IDQIS+++  +
Sbjct: 87  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P + I      L
Sbjct: 207 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEI-RKADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290


>gi|283782899|ref|YP_003373653.1| thymidylate synthase [Gardnerella vaginalis 409-05]
 gi|283441780|gb|ADB14246.1| thymidylate synthase [Gardnerella vaginalis 409-05]
          Length = 290

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 148/265 (55%), Positives = 189/265 (71%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R+++  G+ + DRTG GT S FG Q+RFD+SK FPL+TTK V +K + +ELLWFL
Sbjct: 27  YEDLVRNILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----NVIDQISSIVQSL 119
           +G SNV +L  +GV IWDEWAD++G+LGP+YGVQWRSWP          IDQI++++  +
Sbjct: 87  KGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLM 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNHPDSRRMIVSAWNPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   PQ+ I      +
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEI-RKADSI 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y+ H  I A V+V
Sbjct: 266 FDYDYSDFKVVEYKHHPTIKAPVAV 290


>gi|89889399|ref|ZP_01200910.1| thymidylate synthase [Flavobacteria bacterium BBFL7]
 gi|89517672|gb|EAS20328.1| thymidylate synthase [Flavobacteria bacterium BBFL7]
          Length = 274

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 164/277 (59%), Positives = 210/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+H++  G+D+ DRTG GTRS FGYQMRF+L +GFP++TTKK+H KS++HELL
Sbjct: 1   MKQYHDLLQHILDHGTDKGDRTGTGTRSIFGYQMRFNLEEGFPMVTTKKLHLKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW+EWA+ +G+LGP+YG QWR+W + D   IDQI  IV++L+
Sbjct: 61  WFLTGDTNVKYLQDNGVRIWNEWANDNGDLGPVYGHQWRNWNNED---IDQIKDIVKTLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV + KLSCQLYQRS
Sbjct: 118 DNPNSRRMMVSAWNPSVMPDTSISFSENVANGKAALPPCHAFFQFYVSDNKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+L TMM+A V GF+YG+FIHT GDVH+Y+NH EQ  LQLSR  R L
Sbjct: 178 ADVFLGVPFNIASYALFTMMMAQVCGFEYGDFIHTFGDVHIYSNHMEQVALQLSRETRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M INP++ D+ +F++EDFTL +Y PH AI   V++
Sbjct: 238 PTMKINPDVKDIFNFKFEDFTLDNYNPHPAIKGAVAI 274


>gi|78484917|ref|YP_390842.1| thymidylate synthase [Thiomicrospira crunogena XCL-2]
 gi|123769134|sp|Q31I55|TYSY_THICR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|78363203|gb|ABB41168.1| thymidylate synthase [Thiomicrospira crunogena XCL-2]
          Length = 277

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 154/277 (55%), Positives = 193/277 (69%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+H+ + G  + DRTG GTRS FGYQMRF+L +GFPL+TTKK+H KS+V+ELL
Sbjct: 1   MKQYLDLLKHITETGVAKGDRTGTGTRSVFGYQMRFNLEEGFPLVTTKKLHLKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  YL  HGV IWDEWA + G+LGPIYG QW +W   +G+ I+QI  ++Q+L+
Sbjct: 61  WFLNGDTNNQYLKEHGVRIWDEWATETGDLGPIYGRQWVAWEKPNGDTINQIEEVIQTLK 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN A +               MAL  CH  FQFYV NGKLSCQLYQRS
Sbjct: 121 KNPNSRRMLVSAWNPADLPDESMSPQENVKQGRMALATCHAFFQFYVANGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASY+LLT M+A     + GEF+ T GDVHLYNN  EQA+LQ+SR+P  L
Sbjct: 181 ADTFLGVPFNIASYALLTHMIAQQTDLEVGEFVWTGGDVHLYNNTLEQAELQMSRTPYAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I      +  + ++DF +  YE H  I A VSV
Sbjct: 241 PKLKIKRKPPSIFDYEFDDFEIEGYESHPHIKAVVSV 277


>gi|118086858|ref|XP_419147.2| PREDICTED: similar to Chain A, Human Thymidylate Synthase Complexed
           With Dump And Raltitrexed, An Antifolate Drug, Is In The
           Closed Conformation [Gallus gallus]
          Length = 298

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 137/282 (48%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  +RH+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 17  QYLQQVRHILQHGHRKEDRTGTGTISVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 76

Query: 63  LRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD                ++G+LGP+YG QWR +         
Sbjct: 77  IKGSTNAKELSAKGVKIWDANGSREFLDKQGFCTREEGDLGPVYGFQWRHFGADYKDMHT 136

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY    +DQ+  +++ ++ +P  RR I+ AWN   I  MALPPCH L QFYV NG+LSCQ
Sbjct: 137 DYSNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQ 196

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E   +QL R
Sbjct: 197 LYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDAHIYLNHVEPLKVQLQR 256

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR LP++ I   + D+  F+ EDF +  Y PH  I  +++V
Sbjct: 257 EPRPLPKLRILRKVEDISDFKAEDFQIEDYNPHPPIKMEMAV 298


>gi|18044897|gb|AAH20139.1| Tyms protein [Mus musculus]
          Length = 307

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 26  QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 86  IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 266 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307


>gi|46358062|ref|NP_067263.1| thymidylate synthase [Mus musculus]
 gi|136614|sp|P07607|TYSY_MOUSE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|285803264|pdb|3IHH|A Chain A, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803265|pdb|3IHH|B Chain B, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803266|pdb|3IHH|C Chain C, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803267|pdb|3IHH|D Chain D, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803268|pdb|3IHH|E Chain E, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803269|pdb|3IHH|F Chain F, Crystal Structure Of Mouse Thymidylate Synthase In Complex
           With Dump
 gi|285803270|pdb|3IHI|A Chain A, Crystal Structure Of Mouse Thymidylate Synthase
 gi|285803271|pdb|3IHI|B Chain B, Crystal Structure Of Mouse Thymidylate Synthase
 gi|202030|gb|AAA40439.1| thymidylate synthase (EC 2.1.1.45) [Mus musculus]
 gi|202050|gb|AAA40444.1| thymidylate synthase [Mus musculus]
 gi|26330828|dbj|BAC29144.1| unnamed protein product [Mus musculus]
 gi|148705313|gb|EDL37260.1| thymidylate synthase, isoform CRA_b [Mus musculus]
          Length = 307

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 26  QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 86  IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 266 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307


>gi|315498745|ref|YP_004087549.1| thymidylate synthase [Asticcacaulis excentricus CB 48]
 gi|315416757|gb|ADU13398.1| thymidylate synthase [Asticcacaulis excentricus CB 48]
          Length = 268

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 159/263 (60%), Positives = 205/263 (77%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLDL+R ++  G  R DRTG GT+  FG Q+RFDL++GFPLLTTKKVH+KSV  ELLW
Sbjct: 7   YQYLDLVRDIMANGVTRMDRTGTGTKGVFGRQIRFDLAEGFPLLTTKKVHFKSVAVELLW 66

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGD+N+ YL  HGVSIWDEWAD++G+LGP+YG QWRSW   DG VIDQ+S ++++L+ 
Sbjct: 67  FLRGDTNIKYLKDHGVSIWDEWADENGDLGPVYGKQWRSWAAPDGRVIDQMSQLIENLKT 126

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P+SRRH++SAWN + ++ MALPPCHCLFQF+V +GKLSCQLYQRS DVFLG+PFNIASY
Sbjct: 127 NPHSRRHVISAWNPSEVEDMALPPCHCLFQFFVADGKLSCQLYQRSADVFLGVPFNIASY 186

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A  +G + G+F+H+ GDVHLY NH EQA  QLSR P + P + +     +L +
Sbjct: 187 ALLTHMVAQAVGLEVGDFVHSFGDVHLYLNHVEQAQTQLSRDPMSFPTLKLAAK-TNLFA 245

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           F Y D  L  Y+ H A+ A V+V
Sbjct: 246 FDYADIELIGYQSHGALKAPVAV 268


>gi|315606206|ref|ZP_07881233.1| thymidylate synthase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312094|gb|EFU60184.1| thymidylate synthase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 267

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 149/263 (56%), Positives = 189/263 (71%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY DLL  ++  G+ + DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KSVV ELLW
Sbjct: 6   RQYEDLLARIMSEGTPKGDRTGTGTRSVFGAQLRYDLSRGFPLITTKRVHVKSVVGELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL G SNVS+L  HG+ IW+EWAD +G+LGP+YGVQWRSW   DG  IDQISS++++LR 
Sbjct: 66  FLSGSSNVSWLQEHGIRIWNEWADGNGDLGPVYGVQWRSWNAGDGRRIDQISSVLETLRT 125

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV  + +MAL PCH  FQ YV +G+LS QLYQRS D+FLG+PFNIASY
Sbjct: 126 DPDSRRMVVSAWNVGDLKEMALEPCHAFFQLYVADGRLSLQLYQRSADMFLGVPFNIASY 185

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           SLLT M A   G + G+F+ T GD H+Y+NH EQ   QLSR P   P++ +      +  
Sbjct: 186 SLLTHMFAQQAGLEVGDFVWTGGDCHIYSNHTEQVREQLSRDPYPFPRLELI-KARSMFD 244

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + +ED +   Y+ H  I A V+V
Sbjct: 245 YSFEDISFAGYQHHPTIKAPVAV 267


>gi|88802703|ref|ZP_01118230.1| thymidylate synthase [Polaribacter irgensii 23-P]
 gi|88781561|gb|EAR12739.1| thymidylate synthase [Polaribacter irgensii 23-P]
          Length = 274

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 154/277 (55%), Positives = 207/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++HV++ G+++ DRTG GT+S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MKQYHDLVKHVLESGNEKGDRTGTGTKSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL  +GV IW+ WAD++G+LGP+YG QWR+W   D   IDQ+  ++ +L+
Sbjct: 61  WFIKGDTNIKYLQDNGVKIWNSWADENGDLGPVYGHQWRNWNSDD---IDQLKEVITTLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +V+AWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 TNPNSRRMMVAAWNPSVMPDTAASFSDNVANGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ GEFIHT GD H+YNNH EQ +LQLSR  R L
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEAGEFIHTFGDAHIYNNHIEQLELQLSREIRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +N  I D+ +F +EDF L  Y PH  I  KV++
Sbjct: 238 PKMKLNAAIEDIENFTFEDFELLEYNPHPHIKGKVAI 274


>gi|227501444|ref|ZP_03931493.1| thymidylate synthase [Corynebacterium accolens ATCC 49725]
 gi|227077469|gb|EEI15432.1| thymidylate synthase [Corynebacterium accolens ATCC 49725]
          Length = 275

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 152/261 (58%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++  VV ELLWFL
Sbjct: 16  YEDLLRRVLESGTAKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHGVVGELLWFL 75

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  + V IW+EWAD++G+LGP+YGVQWRSWP  DG+ IDQI   + +L+ +P
Sbjct: 76  RGDSNVKFLQDNNVRIWNEWADENGDLGPVYGVQWRSWPTPDGSHIDQIQQALDTLKNNP 135

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNV+ +D+MAL PCH LFQ YV N  LS Q+YQRS D+FLG+PFNIASY+ 
Sbjct: 136 DSRRNLVSAWNVSELDQMALMPCHLLFQLYVANDTLSLQVYQRSADMFLGVPFNIASYAA 195

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + G+ I T GD H+YNNH EQ   QLSR PR  PQ+ +N    DL S+ 
Sbjct: 196 LTHMFAQQAGLKVGDLIWTGGDCHIYNNHIEQVQEQLSREPREYPQLKLN-KAKDLFSYD 254

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + DF ++ Y+PH AI A+VSV
Sbjct: 255 FADFEVQGYDPHPAIKAQVSV 275


>gi|254821236|ref|ZP_05226237.1| thymidylate synthase [Mycobacterium intracellulare ATCC 13950]
          Length = 266

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 164/261 (62%), Positives = 198/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG Q+R+DLS GFPLLTTKKVH KSVV+ELLWFL
Sbjct: 7   YEDLLRLVLDEGTAKSDRTGTGTRSLFGRQLRYDLSAGFPLLTTKKVHLKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV++LH HGV+IWDEWA   G+LGPIYGVQWRSWP   G  +DQIS+ +  LR DP
Sbjct: 67  RGDSNVAWLHEHGVTIWDEWASDAGDLGPIYGVQWRSWPTPTGEHVDQISAALDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 NSRRIIVSAWNVGEIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ  LQLSR PR  P++++      +  + 
Sbjct: 187 LTHMMAAQSGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELVLG-ERDSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y D  +R+Y+PH AI A V+V
Sbjct: 246 YGDVVVRNYDPHPAIKAPVAV 266


>gi|121610113|ref|YP_997920.1| thymidylate synthase [Verminephrobacter eiseniae EF01-2]
 gi|121554753|gb|ABM58902.1| thymidylate synthase [Verminephrobacter eiseniae EF01-2]
          Length = 298

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 157/268 (58%), Positives = 188/268 (70%), Gaps = 7/268 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+RHV + G  + DRTG GT+S FG+QMRFDL  GFPL+TTK+VH KS++ ELLWFL
Sbjct: 31  YEDLMRHVFRHGVHKSDRTGTGTKSLFGHQMRFDLRGGFPLVTTKRVHLKSIIEELLWFL 90

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            G  N  +L + GVSIWDEWA  DG+LGP+YGVQWRSWP  DG  IDQI S++ +L+ +P
Sbjct: 91  AGSGNNRWLQQRGVSIWDEWARADGDLGPVYGVQWRSWPRPDGGHIDQIGSVIATLKTNP 150

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIPF 176
            SRR IVSAWNVA +DKMAL PCH LFQFYV         G LSCQLYQRS D+FLG+PF
Sbjct: 151 DSRRIIVSAWNVAELDKMALQPCHILFQFYVAPAQTPGGRGTLSCQLYQRSADIFLGLPF 210

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           NIASY+LLT M+A       GEFI T GD H+Y+NH  Q   QL+RSP   PQ+ I    
Sbjct: 211 NIASYALLTHMVAQQCELDVGEFIWTGGDCHIYDNHHAQVQTQLARSPYPYPQLRIRRRP 270

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             +  +RYEDF +  Y  H AI A V+V
Sbjct: 271 DSIFDYRYEDFEVLDYRCHPAIKAPVAV 298


>gi|292493864|ref|YP_003529303.1| thymidylate synthase [Nitrosococcus halophilus Nc4]
 gi|291582459|gb|ADE16916.1| thymidylate synthase [Nitrosococcus halophilus Nc4]
          Length = 264

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 158/264 (59%), Positives = 198/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  G +R DRTG GT S FG+QMRFDL +GFPL+TTKK+H +S+  ELL
Sbjct: 1   MKPYLDLIQKILDTGVERDDRTGTGTWSIFGHQMRFDLQQGFPLVTTKKLHVRSIFIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP  DG  +DQIS +++ +R
Sbjct: 61  WFLRGDTNVQYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGRHLDQISKVLEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +PYSRRH+V A+N + +D+MALPPCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 HNPYSRRHMVVAYNPSNVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT ++A     + GEFI T GDVHLY NH E A LQL+R P   P++ +      L 
Sbjct: 181 YALLTHLMAQQCDLEVGEFIWTGGDVHLYRNHLELARLQLTREPLPPPRLRLKRKPPSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++YED  +  Y+ H  I A+VSV
Sbjct: 241 EYQYEDLEVVGYQSHPHIKAEVSV 264


>gi|167752654|ref|ZP_02424781.1| hypothetical protein ALIPUT_00910 [Alistipes putredinis DSM 17216]
 gi|167659723|gb|EDS03853.1| hypothetical protein ALIPUT_00910 [Alistipes putredinis DSM 17216]
          Length = 299

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 163/298 (54%), Positives = 195/298 (65%), Gaps = 35/298 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR + K G  + DRTG GTRS FGYQMRFDL  GFPLLTTKKV  K V++ELL
Sbjct: 1   MQQYLDLLRKIRKDGIVKSDRTGTGTRSIFGYQMRFDLEAGFPLLTTKKVFLKGVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD--------------------------------- 87
           WFL+GD+N+ YL  HGV IWD  A +                                  
Sbjct: 61  WFLQGDTNIKYLLDHGVHIWDNDAYRYYNELCVRHGVLPLEREAFLDAVRREEPSSIDGY 120

Query: 88  --GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
             G+L  +YG QWRSWP  DG  IDQI  ++  ++  P SRR +VSAWNVA +D MALPP
Sbjct: 121 RPGDLNHVYGYQWRSWPRPDGGCIDQIRQVIDQIKHSPDSRRMLVSAWNVAEVDDMALPP 180

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           CH LFQFYV  G+LSCQLYQRS D FLG+PFNIASY+LLTMM+A   G + G+F+HTLGD
Sbjct: 181 CHVLFQFYVAGGRLSCQLYQRSADTFLGVPFNIASYALLTMMIAQECGLRPGDFVHTLGD 240

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            HLY NH +Q   QLSR+PR LP + +NP +  +  FRYEDFTL +Y+P  AI A +S
Sbjct: 241 AHLYLNHADQVAEQLSRTPRPLPTLRLNPAVRSVFDFRYEDFTLENYDPWPAIKAPMS 298


>gi|291457285|ref|ZP_06596675.1| thymidylate synthase [Bifidobacterium breve DSM 20213]
 gi|291381120|gb|EFE88638.1| thymidylate synthase [Bifidobacterium breve DSM 20213]
          Length = 290

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 151/265 (56%), Positives = 191/265 (72%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +L+R ++  G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL
Sbjct: 27  YENLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSQYFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP          IDQIS+++  +
Sbjct: 87  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR +VSAWN A ++KMALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNHPDSRRMVVSAWNPAEVEKMALPPCHALFQFYVANGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   P + I      L
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHVYDNHVDQFLEQLSRDPYPYPTIEI-RKADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDFT+  Y+ H  I A V+V
Sbjct: 266 FDYQYEDFTIVGYQHHPTIKAPVAV 290


>gi|169797290|ref|YP_001715083.1| thymidylate synthase [Acinetobacter baumannii AYE]
 gi|213155900|ref|YP_002317945.1| thymidylate synthase [Acinetobacter baumannii AB0057]
 gi|215484727|ref|YP_002326962.1| thymidylate synthase [Acinetobacter baumannii AB307-0294]
 gi|301346589|ref|ZP_07227330.1| thymidylate synthase [Acinetobacter baumannii AB056]
 gi|301511036|ref|ZP_07236273.1| thymidylate synthase [Acinetobacter baumannii AB058]
 gi|301595085|ref|ZP_07240093.1| thymidylate synthase [Acinetobacter baumannii AB059]
 gi|332851207|ref|ZP_08433280.1| thymidylate synthase [Acinetobacter baumannii 6013150]
 gi|332866061|ref|ZP_08436789.1| thymidylate synthase [Acinetobacter baumannii 6013113]
 gi|226713163|sp|B7H0P4|TYSY_ACIB3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|226713164|sp|B7I4U0|TYSY_ACIB5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|169150217|emb|CAM88113.1| thymidylate synthase (TS) (TSase) [Acinetobacter baumannii AYE]
 gi|213055060|gb|ACJ39962.1| thymidylate synthase [Acinetobacter baumannii AB0057]
 gi|213986584|gb|ACJ56883.1| thymidylate synthase [Acinetobacter baumannii AB307-0294]
 gi|332730087|gb|EGJ61414.1| thymidylate synthase [Acinetobacter baumannii 6013150]
 gi|332734807|gb|EGJ65900.1| thymidylate synthase [Acinetobacter baumannii 6013113]
          Length = 280

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/280 (55%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA           + ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP + D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|213692995|ref|YP_002323581.1| Thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213524456|gb|ACJ53203.1| Thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320459175|dbj|BAJ69796.1| thymidylate synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 290

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 150/265 (56%), Positives = 188/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP          IDQI +++  +
Sbjct: 87  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQIFNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++KMALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P + I      L
Sbjct: 207 SYSLLTMMMAQQTGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEI-RKADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290


>gi|227504242|ref|ZP_03934291.1| thymidylate synthase [Corynebacterium striatum ATCC 6940]
 gi|227199197|gb|EEI79245.1| thymidylate synthase [Corynebacterium striatum ATCC 6940]
          Length = 265

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 150/266 (56%), Positives = 193/266 (72%), Gaps = 3/266 (1%)

Query: 1   MHQ--YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
           M Q  Y DLLR V++ G+++ DRTG GTRS FG Q+R++L+  FPLLTTKKV++  V+ E
Sbjct: 1   MIQTPYEDLLRKVLEEGAEKGDRTGTGTRSIFGAQLRYNLADSFPLLTTKKVYFHGVIGE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
           LLWFL+GDSNV +L  + V IW+EWAD DGELGP+YGVQWRSWP  DG  +DQI   + +
Sbjct: 61  LLWFLKGDSNVKWLQDNNVRIWNEWADADGELGPVYGVQWRSWPTPDGTHVDQIQQALDT 120

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           L+ +P SRR++VSAWNVA +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFN+
Sbjct: 121 LQNNPDSRRNLVSAWNVAELDKMALMPCHLLFQLYVADGKLSLQVYQRSADMFLGVPFNL 180

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           ASY+ L  M A   G + GE I T GD H+YN+H EQ   QLSR PR  PQ+ ++     
Sbjct: 181 ASYAALAHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSREPRPYPQLKLH-KADS 239

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           L  + ++DF +  Y+PH  I A+VSV
Sbjct: 240 LFDYTFDDFEVVGYDPHPTIKAQVSV 265


>gi|294788691|ref|ZP_06753933.1| thymidylate synthase [Simonsiella muelleri ATCC 29453]
 gi|294483568|gb|EFG31253.1| thymidylate synthase [Simonsiella muelleri ATCC 29453]
          Length = 264

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 173/264 (65%), Positives = 213/264 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L+++V++ G+D+ DRTG GTRS FGYQMRFDL+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MQTYLNLIQYVLEHGTDKSDRTGTGTRSVFGYQMRFDLANGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  + VSIWDEWAD++G+LG +YG QWRSW   +G  IDQIS I+Q ++
Sbjct: 61  WFLKGETNIKYLKDNNVSIWDEWADENGDLGRVYGAQWRSWQTPNGKSIDQISQIIQQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QNPDSRRLIVSAWNPAEVDNMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   Q GEFIHTLGD H+YNNHFEQA LQL+R PR LP++ IN  I DL 
Sbjct: 181 YALLTMMMAQVCKLQAGEFIHTLGDAHIYNNHFEQAKLQLTREPRRLPEIKINDKIKDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L +Y PH  I A+VSV
Sbjct: 241 EFKYEDFELINYNPHPHIKAEVSV 264


>gi|306835604|ref|ZP_07468615.1| thymidylate synthase [Corynebacterium accolens ATCC 49726]
 gi|304568537|gb|EFM44091.1| thymidylate synthase [Corynebacterium accolens ATCC 49726]
          Length = 275

 Score =  371 bits (952), Expect = e-101,   Method: Composition-based stats.
 Identities = 150/261 (57%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV+++ V+ ELLWFL
Sbjct: 16  YEDLLRRVLEEGTAKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFRGVIGELLWFL 75

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  + V IW+EWAD++G+LGP+YGVQWRSWP  DG+ IDQI   + +L+ +P
Sbjct: 76  RGDSNVKFLQDNNVHIWNEWADENGDLGPVYGVQWRSWPTPDGSHIDQIQQALDTLKNNP 135

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNV+ +D+MAL PCH LFQ YV N  LS Q+YQRS D+FLG+PFNIASY+ 
Sbjct: 136 DSRRNLVSAWNVSELDQMALMPCHLLFQLYVANDTLSLQVYQRSADMFLGVPFNIASYAA 195

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + G+ I T GD H+YNNH EQ   QL R PR  PQ+ +N    DL S+ 
Sbjct: 196 LTHMFAQQAGLKVGDLIWTGGDCHIYNNHVEQVQEQLFREPREYPQLKLN-KAKDLFSYD 254

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + DF ++ Y+PH AI A+VSV
Sbjct: 255 FADFEVQGYDPHPAIKAQVSV 275


>gi|255321180|ref|ZP_05362346.1| thymidylate synthase [Acinetobacter radioresistens SK82]
 gi|255301734|gb|EET80985.1| thymidylate synthase [Acinetobacter radioresistens SK82]
          Length = 280

 Score =  371 bits (952), Expect = e-101,   Method: Composition-based stats.
 Identities = 161/280 (57%), Positives = 201/280 (71%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+H+++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRQYLDLLQHILEHGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP---DYDG-- 106
           WFL+GD+NV YL  + V+IWDEWA  +         GELGP+YG QWR++    + DG  
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPTGELGPVYGHQWRNFGATQNEDGSY 120

Query: 107 --NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             N  DQIS ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V NGKLSCQLY
Sbjct: 121 QQNGFDQISWLINEIKTNPNSRRLIVSGWNPKEASQVALPPCHTLFQFFVQNGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V   Q G+F+ T GD HLY NHFEQA LQL R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLQVGDFVWTGGDTHLYANHFEQARLQLGRDP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP +  +  F++ED  + +Y  H AI A V+V
Sbjct: 241 LELCQLKLNPEVKSIFDFKFEDIEIINYHSHPAIKAPVAV 280


>gi|184156788|ref|YP_001845127.1| thymidylate synthase [Acinetobacter baumannii ACICU]
 gi|239500809|ref|ZP_04660119.1| thymidylate synthase [Acinetobacter baumannii AB900]
 gi|332873201|ref|ZP_08441158.1| thymidylate synthase [Acinetobacter baumannii 6014059]
 gi|183208382|gb|ACC55780.1| Thymidylate synthase [Acinetobacter baumannii ACICU]
 gi|322506680|gb|ADX02134.1| thyA [Acinetobacter baumannii 1656-2]
 gi|323516555|gb|ADX90936.1| thymidylate synthase [Acinetobacter baumannii TCDC-AB0715]
 gi|332738713|gb|EGJ69583.1| thymidylate synthase [Acinetobacter baumannii 6014059]
          Length = 280

 Score =  371 bits (952), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA           + ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP++ D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|260556178|ref|ZP_05828397.1| thymidylate synthase [Acinetobacter baumannii ATCC 19606]
 gi|193076274|gb|ABO10913.2| thymidylate synthase [Acinetobacter baumannii ATCC 17978]
 gi|260410233|gb|EEX03532.1| thymidylate synthase [Acinetobacter baumannii ATCC 19606]
          Length = 280

 Score =  371 bits (952), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA           + ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLDVGDFVWTGGDTHLYANHFEQAKLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP++ D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|121998826|ref|YP_001003613.1| thymidylate synthase [Halorhodospira halophila SL1]
 gi|166231707|sp|A1WYP9|TYSY_HALHL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|121590231|gb|ABM62811.1| thymidylate synthase [Halorhodospira halophila SL1]
          Length = 264

 Score =  371 bits (952), Expect = e-101,   Method: Composition-based stats.
 Identities = 155/264 (58%), Positives = 189/264 (71%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++HV++ G  + DRTG GT S FG+QMRFDL  GFPL+TTK+V W+ V  ELL
Sbjct: 1   MRAYLDLVQHVLEHGHRKEDRTGTGTLSVFGHQMRFDLEAGFPLVTTKRVFWRGVAEELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RG +N   L   GV IW  WAD DGELGP+YG QWRSW   DG  IDQ+  ++  LR
Sbjct: 61  WFIRGSTNARELEDKGVRIWSPWADPDGELGPVYGAQWRSWRAADGREIDQLQQVLTELR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRRH+VSAWNV  +++M LPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 QRPDSRRHLVSAWNVGELERMNLPPCHLLFQFYVAEGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A  +G + GEFI T GD HLY NH  QA  QLSR+PR LP + I+P + DL 
Sbjct: 181 YSLLTHLVARHVGLEVGEFIWTGGDCHLYLNHLAQAREQLSRAPRPLPTLHIDPGVTDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           + RYE   L  Y+PH  + A V+V
Sbjct: 241 AVRYEHLRLAGYDPHPKLTAPVAV 264


>gi|256394947|ref|YP_003116511.1| thymidylate synthase [Catenulispora acidiphila DSM 44928]
 gi|256361173|gb|ACU74670.1| thymidylate synthase [Catenulispora acidiphila DSM 44928]
          Length = 277

 Score =  370 bits (951), Expect = e-101,   Method: Composition-based stats.
 Identities = 155/262 (59%), Positives = 195/262 (74%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL+ V+  G+ + DRTGVGTRS FG+Q+R+ L  GFPL+TTKKVH+KSV +ELLWF
Sbjct: 17  QYEDLLQRVLTSGTVKADRTGVGTRSLFGHQLRYRLQDGFPLITTKKVHFKSVAYELLWF 76

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG+ NV +L  HGVSIWDEWAD +G+LGP+YGVQWRSWP  DG  +DQI+ +++ LR D
Sbjct: 77  LRGEGNVRWLQEHGVSIWDEWADAEGDLGPVYGVQWRSWPTPDGRHVDQIAEVLRLLRTD 136

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNV  +  MALPPCH  FQFYV +G LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 137 PDSRRIVVSAWNVGELTNMALPPCHAFFQFYVADGALSCQLYQRSADMFLGVPFNIASYA 196

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A+  G   G+ + T GD+H+Y+NH EQA L L+R  R  P + + P    L  +
Sbjct: 197 LLTHMIAAQTGLAVGDLVWTGGDIHIYDNHVEQARLLLTREARLFPTLELKPA-DSLFDY 255

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YED  +  Y+PH AI A V+V
Sbjct: 256 SYEDIAVLGYDPHPAIKAPVAV 277


>gi|149377241|ref|ZP_01894988.1| Thymidylate synthase [Marinobacter algicola DG893]
 gi|149358429|gb|EDM46904.1| Thymidylate synthase [Marinobacter algicola DG893]
          Length = 279

 Score =  370 bits (951), Expect = e-101,   Method: Composition-based stats.
 Identities = 152/279 (54%), Positives = 188/279 (67%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ V+  G DR DRTGVGTRS FG Q+RFDL  GFPL+TTKKVH +S++ ELL
Sbjct: 1   MKAYLDLMKDVVDNGMDRGDRTGVGTRSVFGRQIRFDLQGGFPLVTTKKVHLRSIIQELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G ++ ++L    VSIW+EWA ++G+LGPIYG QWRSW   DG+ +DQIS +++ +R
Sbjct: 61  WFLQGSTDNNWLKERNVSIWNEWALENGDLGPIYGKQWRSWHCPDGSTVDQISEVIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWN A +               MAL PCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 NKPNSRRLIVSAWNPAELPDESIGPQDNVRQGRMALAPCHCLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLSRSPR 225
            D+FLG+PFNIASY+LLT M+A       GEF+HT GD HLY NH        QL R PR
Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLGVGEFVHTFGDCHLYQNHLTDNIVFEQLKREPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LPQ++I      +  +  EDF    YEPH  I A ++V
Sbjct: 241 ALPQLVIKRKPSSIFEYELEDFEFDGYEPHPGIKAPIAV 279


>gi|119025406|ref|YP_909251.1| thymidylate synthase [Bifidobacterium adolescentis ATCC 15703]
 gi|118764990|dbj|BAF39169.1| thymidylate synthase [Bifidobacterium adolescentis ATCC 15703]
          Length = 266

 Score =  370 bits (951), Expect = e-101,   Method: Composition-based stats.
 Identities = 146/265 (55%), Positives = 187/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRF+L   FPLLTTK V +K + +ELLWFL
Sbjct: 3   YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFNLKDSFPLLTTKTVFFKGLAYELLWFL 62

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L  H V IWDEWAD++G+LGP+YG QWRSWP    D     IDQIS+++  +
Sbjct: 63  KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 123 RNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDIFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G + GEF+ T GD H+Y+NH +Q   QLSR+P   PQ+ I      L
Sbjct: 183 SYSLLTLMMAQQTGLEPGEFVWTGGDCHVYDNHIDQVLEQLSRTPYPYPQIRI-RKADSL 241

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF + +Y+ H  I A V+V
Sbjct: 242 FDYDYSDFEIVNYQHHPTIKAPVAV 266


>gi|269957617|ref|YP_003327406.1| thymidylate synthase [Xylanimonas cellulosilytica DSM 15894]
 gi|269306298|gb|ACZ31848.1| thymidylate synthase [Xylanimonas cellulosilytica DSM 15894]
          Length = 272

 Score =  370 bits (951), Expect = e-101,   Method: Composition-based stats.
 Identities = 159/261 (60%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LLR V+  G+ + DRTG GT S FG Q+R+DLS+GFPL+TTK+VH KSVV+ELLWFL
Sbjct: 13  YENLLRDVLAHGTHKDDRTGTGTTSVFGRQLRYDLSQGFPLITTKRVHLKSVVYELLWFL 72

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  HGVSIWDEWA   GELGP+YGVQWRSWP  DG  +DQIS +V  LR +P
Sbjct: 73  RGESNVRWLQEHGVSIWDEWASPAGELGPVYGVQWRSWPTPDGAHVDQISQVVDQLRTNP 132

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRHIVSAWNVA I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 133 DSRRHIVSAWNVAEIKNMALPPCHLLFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 192

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH  Q   QLSR P    ++ + P    +  + 
Sbjct: 193 LTHMVAAQTGLDVGEFVWTGGDCHIYDNHLAQVTEQLSRDPYPYARLELAPR-DSIFDYT 251

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y+D  +  Y+ H AI A V+V
Sbjct: 252 YDDVVVHDYQHHPAIKAAVAV 272


>gi|172041200|ref|YP_001800914.1| thymidylate synthase [Corynebacterium urealyticum DSM 7109]
 gi|171852504|emb|CAQ05480.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 273

 Score =  370 bits (951), Expect = e-101,   Method: Composition-based stats.
 Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  ++  G+ + DRTG GT S FG Q+RF+L++ FPL+TTK VH KSVV ELLWFL
Sbjct: 14  YEDLLSKILAEGAKKDDRTGTGTTSLFGQQIRFNLAESFPLITTKSVHVKSVVGELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            GDSNV +L  +G+ IW+EWAD+DG+LGP+YGVQWRSWP  DG  IDQIS  ++ L+ +P
Sbjct: 74  SGDSNVRWLQDNGIRIWNEWADEDGDLGPVYGVQWRSWPTPDGRHIDQISQALEMLKQNP 133

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 134 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 193

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEFI T GD H+Y+NH EQ +LQLSR PR  PQ+ +     D+ S+ 
Sbjct: 194 LTHMFAQQTGLEVGEFIWTGGDCHIYDNHREQVELQLSREPRPYPQLEL-TKAKDMFSYG 252

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED     Y+PH  I AKV+V
Sbjct: 253 FEDVNFVGYDPHPVIKAKVAV 273


>gi|313159542|gb|EFR58905.1| thymidylate synthase [Alistipes sp. HGB5]
          Length = 299

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 167/298 (56%), Positives = 195/298 (65%), Gaps = 35/298 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLLR +   G  R DRTG GT+  FG+QMRFDL++GFPLLTTKKV  K V+HELL
Sbjct: 1   MKQYLDLLRRIKTEGVVRGDRTGTGTKGVFGHQMRFDLAEGFPLLTTKKVFLKGVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------------D 85
           WFL GD+N+ YL  +GV IWD  A                                    
Sbjct: 61  WFLAGDTNIKYLVDNGVHIWDNDAFRYYNELCVRHGVLPVDRDTFLRAAQEGVESPVEGY 120

Query: 86  KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
           K G+L  +YG QWRSWP  DG V+DQI+  V  +R++P SRR +VSAWNVA ++ MALPP
Sbjct: 121 KFGDLNHVYGYQWRSWPKPDGTVVDQIAQAVGLIRSNPESRRILVSAWNVAEVEDMALPP 180

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           CH LFQFYV  GKLSCQLYQRS D FLG+PFNIASY+LLT+M A V G Q GEF+HTLGD
Sbjct: 181 CHVLFQFYVAEGKLSCQLYQRSADTFLGVPFNIASYALLTLMTAQVCGLQPGEFVHTLGD 240

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            HLY NH EQ D QL+R PR LP M +NP +  L  FRY DFTL  Y+P  AI A +S
Sbjct: 241 THLYLNHLEQVDEQLAREPRPLPVMRLNPAVKSLFDFRYGDFTLEGYDPWPAIKAPMS 298


>gi|163735032|ref|ZP_02142469.1| thymidylate synthase [Roseobacter litoralis Och 149]
 gi|161391814|gb|EDQ16146.1| thymidylate synthase [Roseobacter litoralis Och 149]
          Length = 277

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 147/277 (53%), Positives = 204/277 (73%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D LR +++FG +  DRTG GT S FG QMR+ LS GFPL+TTKK+H +S+ HELL
Sbjct: 1   MQQYHDALRTILEFGEESTDRTGTGTTSYFGMQMRYRLSDGFPLVTTKKLHLRSIFHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-------------PDYDGN 107
           WFL GD+N+ YL  +GV IWDEWAD++G+LGP+YG QWR++             P + G 
Sbjct: 61  WFLSGDTNIRYLQENGVKIWDEWADENGDLGPVYGHQWRAFSAGAQTGDVKDDEPLHIGR 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQ+++++ ++++ P SRR IVSAWN A + +MALPPCH L+Q  V NG++  QLYQRS
Sbjct: 121 GVDQVANLIDTIKSSPDSRRLIVSAWNPADVPRMALPPCHALWQVRVLNGRMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASYS+L +MLA V G++ G+F+HTLGD H+Y+NH +Q +LQL+R+P+ L
Sbjct: 181 ADMFLGVPFNIASYSMLLVMLAHVTGYEPGDFVHTLGDAHIYSNHMDQVNLQLTRTPKPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ IN ++  +  FRYEDF +  Y+P  AI A V+V
Sbjct: 241 PKLRINRDVSSIFDFRYEDFEVIGYDPDPAIRAPVAV 277


>gi|262374153|ref|ZP_06067430.1| thymidylate synthase [Acinetobacter junii SH205]
 gi|262311164|gb|EEY92251.1| thymidylate synthase [Acinetobacter junii SH205]
          Length = 280

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 162/280 (57%), Positives = 200/280 (71%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRTYLDLLQHILDNGGDKDDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP---DYDG-- 106
           WFL+GD+NV YL  + V+IWDEWA           +GELGP+YG QWR++    + DG  
Sbjct: 61  WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGASQNEDGSY 120

Query: 107 --NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             N  DQI  +V  ++ +P SRR IVS WN     K+ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 QQNGFDQIKWLVNEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVHDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLDVGDFVWTGGDTHLYANHFEQAKLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP+I D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPDIKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|153208297|ref|ZP_01946676.1| thymidylate synthase [Coxiella burnetii 'MSU Goat Q177']
 gi|212219260|ref|YP_002306047.1| thymidylate synthase [Coxiella burnetii CbuK_Q154]
 gi|120576081|gb|EAX32705.1| thymidylate synthase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013522|gb|ACJ20902.1| thymidylate synthase [Coxiella burnetii CbuK_Q154]
          Length = 264

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/264 (56%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+ ++  G  + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL
Sbjct: 1   MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W   DG  +DQ+  +++ ++
Sbjct: 61  WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A     + GEFI + GD H+YN H +Q   QLSR PR LPQ+IIN +   L 
Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINCDPSSLY 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + + DF++ +Y PH AI A V+V
Sbjct: 241 DYNFNDFSIVNYHPHPAIKAPVAV 264


>gi|311744165|ref|ZP_07717970.1| thymidylate synthase [Aeromicrobium marinum DSM 15272]
 gi|311312520|gb|EFQ82432.1| thymidylate synthase [Aeromicrobium marinum DSM 15272]
          Length = 269

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 151/269 (56%), Positives = 201/269 (74%), Gaps = 5/269 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLD++R ++  G ++ DRTG GT S FG+Q R+DL  GFPL+TTK++H  SVV ELL
Sbjct: 1   MQAYLDIIRRILDEGVEKSDRTGTGTLSVFGHQTRYDLRAGFPLVTTKRIHLPSVVGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ GD+N ++L  HGV+IWDEWAD++G+LGP+YG QWRSWP   G  +DQ++++VQ L 
Sbjct: 61  WFVSGDTNTAFLREHGVTIWDEWADENGDLGPVYGHQWRSWPTPSGQHVDQLAAVVQQLG 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-----NGKLSCQLYQRSGDVFLGIP 175
            DP SRRH+VSAWNVA +D MAL PCH LFQFYV+      G+LSCQLYQRS DVFLG+P
Sbjct: 121 VDPDSRRHLVSAWNVADLDAMALAPCHALFQFYVEPRTDGPGRLSCQLYQRSADVFLGVP 180

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT M+A V G + G+F+HTLGD HLY NH +QA  QL+R+PR LP + ++P 
Sbjct: 181 FNIASYALLTHMVAQVAGLEVGDFVHTLGDAHLYLNHLDQAREQLTRAPRPLPDLWLDPQ 240

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  +  F ++   +  Y+PH +I A ++V
Sbjct: 241 VDSIDGFGFDSIKVTGYDPHPSIKAPIAV 269


>gi|260579743|ref|ZP_05847601.1| thymidylate synthase [Corynebacterium jeikeium ATCC 43734]
 gi|258602129|gb|EEW15448.1| thymidylate synthase [Corynebacterium jeikeium ATCC 43734]
          Length = 273

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/261 (60%), Positives = 197/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ G+ + DRTG GT S FG Q+R+DLS GFPL+TTK VH KSVV ELLWFL
Sbjct: 14  YEDLLREILETGTPKGDRTGTGTTSLFGRQIRYDLSAGFPLITTKSVHVKSVVGELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +G+ IW+EWAD++G+LGP+YGVQWRSWP  +G  IDQI+  +++LR +P
Sbjct: 74  RGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPNGQHIDQIAGALETLRTNP 133

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 134 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 193

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEFI T GD H+Y+NH EQ  LQLSR  R  PQ+ +N    D+ S+ 
Sbjct: 194 LTHMFAQQSGLEVGEFIWTGGDCHIYDNHVEQVQLQLSRDARPYPQLKLN-KAADMFSYD 252

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + D     Y+PH  I AKV+V
Sbjct: 253 FSDIEFTGYDPHPVIKAKVAV 273


>gi|30690081|ref|NP_195183.2| THY-2 (thymidylate synthase 2); dihydrofolate reductase/
           thymidylate synthase [Arabidopsis thaliana]
 gi|150421542|sp|Q05763|DRTS2_ARATH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase 2; Short=DHFR-TS 2; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|110743754|dbj|BAE99713.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
 gi|332660994|gb|AEE86394.1| thymidylate synthase [Arabidopsis thaliana]
          Length = 565

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/281 (46%), Positives = 174/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L++ +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 285 YLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 344

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD  A             ++G+LGP+YG QWR +         D
Sbjct: 345 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 404

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 405 YTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 464

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT +LA V     G+FIH +GD H+Y NH      QL   
Sbjct: 465 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 524

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   D+ SF  +DF L  Y+PH  I  K++V
Sbjct: 525 PKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 565


>gi|300858051|ref|YP_003783034.1| thymidylate synthase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685505|gb|ADK28427.1| Thymidylate synthase [Corynebacterium pseudotuberculosis FRC41]
 gi|302205773|gb|ADL10115.1| thymidylate synthase [Corynebacterium pseudotuberculosis C231]
 gi|302330331|gb|ADL20525.1| thymidylate synthase [Corynebacterium pseudotuberculosis 1002]
 gi|308276007|gb|ADO25906.1| thymidylate synthase [Corynebacterium pseudotuberculosis I19]
          Length = 265

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/261 (60%), Positives = 194/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  GS + DRTG GT S F  QMRFDLS+ FPL+TTKKV+W+ VV ELLWFL
Sbjct: 6   YEDLLRKILSEGSHKDDRTGTGTTSLFAQQMRFDLSESFPLITTKKVYWRGVVGELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G SN+++L  + + IWDEWA +DGELGPIYGVQWRSWP   G  +DQIS  +  L+ +P
Sbjct: 66  QGSSNITWLQDNNIHIWDEWASEDGELGPIYGVQWRSWPTPHGAHVDQISGALDMLKNNP 125

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNVA +D MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYS 
Sbjct: 126 DSRRNIVSAWNVAELDNMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSA 185

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEFI T GD H+Y+NH EQ ++QLSR PR  PQ+ +     DL S+ 
Sbjct: 186 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHREQVEIQLSREPRPYPQLELA-KAKDLFSYD 244

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + DF +  Y+PH AI A+V+V
Sbjct: 245 FADFQVIGYDPHPAIRAEVAV 265


>gi|156406767|ref|XP_001641216.1| predicted protein [Nematostella vectensis]
 gi|156228354|gb|EDO49153.1| predicted protein [Nematostella vectensis]
          Length = 306

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 133/283 (46%), Positives = 184/283 (65%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLD++R++++ G+ + DRTG GT+S FG QMRF L  G FPLLTTK+V W+ V  ELLW
Sbjct: 24  QYLDMIRYIMENGTVKTDRTGTGTKSVFGAQMRFSLRDGVFPLLTTKRVFWRGVAEELLW 83

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F++G +N   L    + IWD                ++G+LGP+YG QWR +        
Sbjct: 84  FVKGCTNAKVLADKNIHIWDANGSRGFLDRQGLSHREEGDLGPVYGFQWRHFGAKYVDMH 143

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++ +P  RR I+ AWN + I  MALPPCH   QFYV NG+LSC
Sbjct: 144 TDYTGQGVDQLAQVIDKIKNNPDDRRIIMLAWNPSDIPLMALPPCHAFVQFYVANGELSC 203

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFNIASYSLLT M+A V G + G+F+H+LGD H+Y NHFE  + QL 
Sbjct: 204 QLYQRSGDMGLGVPFNIASYSLLTYMIAHVCGLKPGDFVHSLGDAHVYLNHFEALEEQLK 263

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P ++I   + D+  F ++DF +  Y+PH  I  +++V
Sbjct: 264 REPRAFPSLVIKRQVDDIDQFTFDDFEIVGYKPHPKIKMEMAV 306


>gi|212716385|ref|ZP_03324513.1| hypothetical protein BIFCAT_01304 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660638|gb|EEB21213.1| hypothetical protein BIFCAT_01304 [Bifidobacterium catenulatum DSM
           16992]
          Length = 303

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/265 (56%), Positives = 186/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL
Sbjct: 40  YEDLVRRILTEGTLKSDRTGTGTISLFGQQMRFDLSEYFPLLTTKTVFFKGLAYELLWFL 99

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L  H V IWDEWAD++G+LGP+YG QWRSWP    D     IDQIS+++  +
Sbjct: 100 KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLV 159

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 160 KNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 219

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G Q GEF+ T GD H+Y+NH +Q   QLSR P   P + IN     L
Sbjct: 220 SYSLLTLMIAQQAGLQPGEFVWTGGDCHVYDNHIDQVLEQLSRDPYPYPHIRIN-KAASL 278

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y  H  I A V+V
Sbjct: 279 FDYDYSDFEIVDYRHHPTIKAPVAV 303


>gi|169822911|gb|ACA96515.1| thymidylate synthase [Expression vector pYB100]
          Length = 325

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 44  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 103

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 104 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 163

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 164 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 223

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 224 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 283

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 284 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 325


>gi|192362015|ref|YP_001980991.1| thymidylate synthase [Cellvibrio japonicus Ueda107]
 gi|190688180|gb|ACE85858.1| thymidylate synthase [Cellvibrio japonicus Ueda107]
          Length = 282

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/279 (53%), Positives = 190/279 (68%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R V++ G  R DRTG GTRS FG Q+RFDL++GFPL+TTK VH KSV+ ELL
Sbjct: 4   MKQYLDLMRDVVENGVTRGDRTGTGTRSVFGRQLRFDLARGFPLVTTKTVHLKSVIVELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G ++V++L   G SIW+EWA + G+LGP+YG QWRSW   DG+ IDQIS +++ ++
Sbjct: 64  WFLQGRTDVTWLQERGCSIWNEWAAESGDLGPVYGKQWRSWACPDGSTIDQISQVIEQIK 123

Query: 121 ADPYSRRHIVSAWNVALIDKMALPP-------------CHCLFQFYVDNGKLSCQLYQRS 167
           A P SRR IVSAWN A +   AL P             CH LFQFYV +GKLSCQLYQRS
Sbjct: 124 AKPNSRRLIVSAWNPADLPDEALSPQENVRQGRMALAACHTLFQFYVADGKLSCQLYQRS 183

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ--ADLQLSRSPR 225
            D+FLG+PFNIASY+LLT M+A       G+F+HT GD HLYNNH        QL+R PR
Sbjct: 184 ADLFLGVPFNIASYALLTHMIAQQCDLGVGDFVHTFGDCHLYNNHITDDIVYEQLTREPR 243

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP++II      +  +  EDF    Y+P+  I A ++V
Sbjct: 244 NLPRLIIRRRPSSIFDYELEDFEFEGYQPYPRIAAPIAV 282


>gi|294649226|ref|ZP_06726664.1| thymidylate synthase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824893|gb|EFF83658.1| thymidylate synthase [Acinetobacter haemolyticus ATCC 19194]
          Length = 280

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 162/280 (57%), Positives = 199/280 (71%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP---DYDG-- 106
           WFL+GD+NV YL  + V+IWDEWA           +GELGP+YG QWR++    + DG  
Sbjct: 61  WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGATQNEDGSY 120

Query: 107 --NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             N  DQI  ++  ++ +P SRR IVS WN     K+ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 QQNGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSRDP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEITDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|162464289|ref|NP_001104916.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea
           mays]
 gi|6685381|sp|O81395|DRTS_MAIZE RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|3309066|gb|AAC26003.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea
           mays]
          Length = 521

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/283 (47%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L+  +I+ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW
Sbjct: 239 YQYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRKNFPLLTTKRVFWRGVVEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F+ G +N   L   G+ IWD                ++G+LGPIYG QWR +        
Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASREYLNSVGLAHREEGDLGPIYGFQWRHFGAEYTDMH 358

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ DP  RR I+SAWN + + KMALPPCH   QFYV+NG+LSC
Sbjct: 359 ADYTGKGFDQLMDVIDKIKNDPEDRRIILSAWNPSDLKKMALPPCHMFAQFYVENGELSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     G+F+H +GD H+Y NH    + Q+ 
Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRNHVRALEEQIQ 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP+  D+ SF   DF L  Y+PH  I  K++V
Sbjct: 479 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKIEMKMAV 521


>gi|332670062|ref|YP_004453070.1| thymidylate synthase [Cellulomonas fimi ATCC 484]
 gi|332339100|gb|AEE45683.1| thymidylate synthase [Cellulomonas fimi ATCC 484]
          Length = 281

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/261 (58%), Positives = 191/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+Q+RFDLS+GFPL+TTK+VH +SVV ELLWFL
Sbjct: 22  YEDLLRLVMATGTPKSDRTGTGTRSVFGHQLRFDLSQGFPLVTTKRVHLRSVVQELLWFL 81

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L   GV+IWDEWAD DGELGP+YGVQWRSWP  DG  +DQI+ +V++LR DP
Sbjct: 82  RGESNVRWLREQGVTIWDEWADADGELGPVYGVQWRSWPTPDGGAVDQITQLVENLRRDP 141

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRH+VSAWNVA I  MAL PCH  FQ YV +G+LS Q+YQRS D+FLG+PFN+ASY+L
Sbjct: 142 DSRRHLVSAWNVAAIPDMALAPCHAFFQAYVADGRLSLQVYQRSADLFLGVPFNLASYAL 201

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA     + G+ + T GD H+Y+NH +Q   QLSR P   P + +      +L +R
Sbjct: 202 LTHMLAQQTDLEVGDLVWTGGDCHVYDNHVDQVREQLSREPYAPPTLRL-RRAPSILEYR 260

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  +  Y  H  I A V+V
Sbjct: 261 FEDVEVVDYRHHPTIKAPVAV 281


>gi|50083753|ref|YP_045263.1| thymidylate synthase [Acinetobacter sp. ADP1]
 gi|62901304|sp|Q6FER7|TYSY_ACIAD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|49529729|emb|CAG67441.1| thymidylate synthase (TS) (TSase) [Acinetobacter sp. ADP1]
          Length = 280

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 160/280 (57%), Positives = 198/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL
Sbjct: 1   MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  H VSIWDEWA           +GELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDHKVSIWDEWATAEQTARFGRPEGELGPVYGHQWRNFGATQNSDGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V +GKLSCQLY
Sbjct: 121 KNDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I DL  F++ED  +  Y+ H AI A V+V
Sbjct: 241 LPLCQLKLNPEITDLFDFKFEDIEIVDYQSHPAIKAPVAV 280


>gi|171057945|ref|YP_001790294.1| thymidylate synthase [Leptothrix cholodnii SP-6]
 gi|170775390|gb|ACB33529.1| Thymidylate synthase [Leptothrix cholodnii SP-6]
          Length = 282

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 156/269 (57%), Positives = 190/269 (70%), Gaps = 7/269 (2%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           Q+ DL+R V   G  + DRTG GTRS FG+QMRFDLS+GFPL+TTKKVH KS++ ELLWF
Sbjct: 14  QFEDLMRLVHTTGVAKGDRTGTGTRSLFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWF 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG+ NV +L   G +IWDEWA  DG+LGP+YGVQWRSWP  DG  IDQI+ +VQ LR++
Sbjct: 74  LRGERNVRWLQERGCTIWDEWARDDGDLGPVYGVQWRSWPTADGGHIDQIAEVVQQLRSN 133

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIP 175
           P SRR IVSAWNVA + +MAL PCH LFQFYV         GKLSCQLYQRS D+FLG+P
Sbjct: 134 PDSRRIIVSAWNVAELPQMALMPCHALFQFYVAPATHEGGRGKLSCQLYQRSADIFLGVP 193

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNIASY+LLT MLA       G+FI T GD HLY+NH  Q + QL+R+P   P + I   
Sbjct: 194 FNIASYALLTHMLAQQCDLDVGDFIWTGGDCHLYDNHTTQVETQLARTPFAYPTLHIKRR 253

Query: 236 IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +  +  +DF +  Y+ H AI A V+V
Sbjct: 254 PASIFDYACDDFEVLDYQHHPAIKAPVAV 282


>gi|225350958|ref|ZP_03741981.1| hypothetical protein BIFPSEUDO_02537 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158414|gb|EEG71656.1| hypothetical protein BIFPSEUDO_02537 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 303

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/265 (56%), Positives = 186/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLS+ FPLLTTK V +K + +ELLWFL
Sbjct: 40  YEDLVRKILTEGTLKSDRTGTGTVSLFGQQMRFDLSEYFPLLTTKTVFFKGLAYELLWFL 99

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L    V IWDEWAD++G+LGP+YG QWRSWP    D     IDQIS+++  +
Sbjct: 100 KGSTNVRWLQERNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLV 159

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
              P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 160 ENHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 219

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G Q GEF+ T GD H+Y+NH +Q   QLSR P   PQ+ IN     L
Sbjct: 220 SYSLLTLMIAQQAGLQPGEFVWTGGDCHVYDNHIDQVLEQLSRDPYPYPQIRIN-KADSL 278

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y+ H  I A V+V
Sbjct: 279 FDYDYSDFEIVGYQHHPTIKAPVAV 303


>gi|261338193|ref|ZP_05966077.1| thymidylate synthase [Bifidobacterium gallicum DSM 20093]
 gi|270276839|gb|EFA22693.1| thymidylate synthase [Bifidobacterium gallicum DSM 20093]
          Length = 289

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 153/265 (57%), Positives = 195/265 (73%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S FG QMRFDL++GFPLLTTK+V  K + +ELLWFL
Sbjct: 26  YEDLLRKILMEGNLKSDRTGTGTISLFGQQMRFDLTQGFPLLTTKRVFLKGITYELLWFL 85

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  H V IWDEWAD+ G+LGP+YGVQWRSWP    D     IDQIS++++ +
Sbjct: 86  KGSSNVRWLQEHNVHIWDEWADEHGDLGPVYGVQWRSWPAPTADDPNRTIDQISNVLELI 145

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R +P SRR +VSAWN A +++MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIA
Sbjct: 146 RTNPDSRRMVVSAWNPAEVEQMALPPCHALFQFYVANGKLSCQLYQRSCDMFLGVPFNIA 205

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYS+LTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   PQ+ I      L
Sbjct: 206 SYSMLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPQLEI-RKADSL 264

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + ++DFT+++Y+ H  I A ++V
Sbjct: 265 FEYDWDDFTIQNYQYHPTIKAPIAV 289


>gi|262369944|ref|ZP_06063271.1| thymidylate synthase [Acinetobacter johnsonii SH046]
 gi|262314983|gb|EEY96023.1| thymidylate synthase [Acinetobacter johnsonii SH046]
          Length = 280

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/280 (56%), Positives = 199/280 (71%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLS+GFPLLTTKKVH++S+V ELL
Sbjct: 1   MKTYLDLLQHILDHGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWPD-------Y 104
           WFL+GD+NV YL  + VSIWDEW+           +GELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLQDNKVSIWDEWSTAEQTARFGRPEGELGPVYGHQWRNFGATKKADGLY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI+ +V  ++ +P SRR IVS WN     ++ALPPCH LFQF+V NGKLSCQLY
Sbjct: 121 EKDGFDQIAWLVNEIKTNPNSRRLIVSGWNPQEAGQVALPPCHTLFQFFVHNGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP + D+  F++ED  +  YE H  I A V+V
Sbjct: 241 LGLCQLKLNPAVKDIFDFKFEDIEIVGYESHPGIKAPVAV 280


>gi|110679164|ref|YP_682171.1| thymidylate synthase [Roseobacter denitrificans OCh 114]
 gi|123172620|sp|Q168V8|TYSY_ROSDO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|109455280|gb|ABG31485.1| thymidylate synthase [Roseobacter denitrificans OCh 114]
          Length = 277

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/277 (53%), Positives = 201/277 (72%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D LR +++ G +  DRTG GT S FG QMR+ LS GFPL+TTKK+H +S+ HELL
Sbjct: 1   MQQYHDALRTILECGEESTDRTGTGTISYFGMQMRYPLSDGFPLVTTKKLHLRSIFHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-------------PDYDGN 107
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR++             P Y G 
Sbjct: 61  WFLSGDTNIRYLQDNGVSIWDEWADENGDLGPVYGHQWRAFSALSPTEEVKDGEPLYLGR 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQ+++++  +++ P SRR IVSAWN A + +MALPPCH L+Q  V NG++  QLYQRS
Sbjct: 121 GVDQVTNLIDMIKSSPDSRRMIVSAWNPADVPRMALPPCHALWQVRVLNGRMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASYSLL +MLA V G++ G+F+HTLGD H+Y+NH +Q +LQL+R+P+ L
Sbjct: 181 ADMFLGVPFNIASYSLLLVMLAHVTGYEPGDFVHTLGDAHIYSNHMDQVNLQLTRTPKPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + IN  +  +  FRYEDF +  Y+P  AI A V+V
Sbjct: 241 PTLRINRQVSSIFDFRYEDFEVIGYDPDPAIRAPVAV 277


>gi|226951963|ref|ZP_03822427.1| thymidylate synthase [Acinetobacter sp. ATCC 27244]
 gi|226837301|gb|EEH69684.1| thymidylate synthase [Acinetobacter sp. ATCC 27244]
          Length = 300

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/280 (57%), Positives = 198/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 21  MRTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 80

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW---------ADKDGELGPIYGVQWRSWP---DYDG-- 106
           WFL+GD+NV YL  + V+IWDEW            +GELGP+YG QWR++    + DG  
Sbjct: 81  WFLKGDTNVQYLKDNKVTIWDEWATAEQTARFDRPEGELGPVYGHQWRNFGATQNEDGSY 140

Query: 107 --NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             N  DQI  ++  ++ +P SRR IVS WN     K+ALPPCH LFQF+V + KLSCQLY
Sbjct: 141 QQNGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGKVALPPCHTLFQFFVQDNKLSCQLY 200

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQLSR P
Sbjct: 201 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLSRDP 260

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I D+  F++ED  +  YE H AI A V+V
Sbjct: 261 LPLCQLKLNPEITDIFDFKFEDIEIVGYESHPAIKAPVAV 300


>gi|68535511|ref|YP_250216.1| thymidylate synthase [Corynebacterium jeikeium K411]
 gi|123761908|sp|Q4JX59|TYSY_CORJK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|68263110|emb|CAI36598.1| thyA [Corynebacterium jeikeium K411]
          Length = 273

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/261 (60%), Positives = 197/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ G+ + DRTG GT S FG Q+R+DLS GFPL+TTK VH KSVV ELLWFL
Sbjct: 14  YEDLLREILETGTPKGDRTGTGTTSLFGRQIRYDLSAGFPLITTKSVHVKSVVGELLWFL 73

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  +G+ IW+EWAD++G+LGP+YGVQWRSWP  +G  IDQI+  +++L+ +P
Sbjct: 74  RGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPNGQHIDQIAGALETLQTNP 133

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ +D MALPPCH LFQ YV NGKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 134 DSRRNIVSAWNVSELDNMALPPCHLLFQLYVANGKLSCQLYQRSADMFLGVPFNIASYSL 193

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEFI T GD H+Y+NH EQ  LQLSR  R  PQ+ +N    D+ S+ 
Sbjct: 194 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHVEQVKLQLSRDARPYPQLKLN-KAADMFSYD 252

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + D     Y+PH  I AKV+V
Sbjct: 253 FSDIEFTGYDPHPVIKAKVAV 273


>gi|120403371|ref|YP_953200.1| thymidylate synthase [Mycobacterium vanbaalenii PYR-1]
 gi|166231718|sp|A1T7P4|TYSY_MYCVP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119956189|gb|ABM13194.1| thymidylate synthase [Mycobacterium vanbaalenii PYR-1]
          Length = 266

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+QMR+DL+ GFPL+TTKKVH KS+V+ELLWFL
Sbjct: 7   YEDLLRLVLDTGTTKSDRTGTGTRSLFGHQMRYDLNAGFPLITTKKVHTKSIVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  HGV+IWDEWA   G+LGP+YGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNVRWLQEHGVTIWDEWASPTGDLGPVYGVQWRSWPTPSGAHIDQISAALDLLRRDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV  G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVSGGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEFI T GD H+Y+NH EQ   QLSR PR  P++++      L  + 
Sbjct: 187 LTHMMAAQAGLGVGEFIWTGGDCHIYDNHVEQVTEQLSREPRPYPELVLAQR-DSLFDYI 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +++Y+PH AI A V+V
Sbjct: 246 YEDVVIKNYDPHPAIKAPVAV 266


>gi|46190148|ref|ZP_00206347.1| COG0207: Thymidylate synthase [Bifidobacterium longum DJO10A]
 gi|189440651|ref|YP_001955732.1| thymidylate synthase [Bifidobacterium longum DJO10A]
 gi|296454779|ref|YP_003661923.1| Thymidylate synthase [Bifidobacterium longum subsp. longum JDM301]
 gi|312133956|ref|YP_004001295.1| thya [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482133|ref|ZP_07941157.1| thymidylate synthase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322691787|ref|YP_004221357.1| thymidylate synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|189429086|gb|ACD99234.1| Thymidylate synthase [Bifidobacterium longum DJO10A]
 gi|291516397|emb|CBK70013.1| thymidylate synthase [Bifidobacterium longum subsp. longum F8]
 gi|296184211|gb|ADH01093.1| Thymidylate synthase [Bifidobacterium longum subsp. longum JDM301]
 gi|311773253|gb|ADQ02741.1| ThyA [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916492|gb|EFV37890.1| thymidylate synthase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456643|dbj|BAJ67265.1| thymidylate synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 290

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/265 (56%), Positives = 188/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP          IDQIS+++  +
Sbjct: 87  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++KMALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADDKLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P + I      L
Sbjct: 207 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEI-RKADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 266 FDYQYEDFKVVGYQHHPTIKAPVAV 290


>gi|189095969|pdb|2RD8|A Chain A, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016200|pdb|2RDA|A Chain A, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016201|pdb|2RDA|B Chain B, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016202|pdb|2RDA|C Chain C, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016203|pdb|2RDA|D Chain D, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016204|pdb|2RDA|E Chain E, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|190016205|pdb|2RDA|F Chain F, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
 gi|295982231|pdb|3H9K|A Chain A, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|295982232|pdb|3H9K|B Chain B, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|295982233|pdb|3H9K|C Chain C, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|295982234|pdb|3H9K|D Chain D, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|295982235|pdb|3H9K|E Chain E, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|296863446|pdb|3HB8|A Chain A, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|296863447|pdb|3HB8|B Chain B, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|296863448|pdb|3HB8|C Chain C, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|296863449|pdb|3HB8|D Chain D, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|296863450|pdb|3HB8|E Chain E, Structures Of Thymidylate Synthase R163k With Substrates
           And Inhibitors Show Subunit Asymmetry
 gi|315364512|pdb|3OB7|A Chain A, Human Thymidylate Synthase R163k With Cys 195 Covalently
           Modified By Glutathione
 gi|315364513|pdb|3OB7|B Chain B, Human Thymidylate Synthase R163k With Cys 195 Covalently
           Modified By Glutathione
 gi|315364514|pdb|3OB7|C Chain C, Human Thymidylate Synthase R163k With Cys 195 Covalently
           Modified By Glutathione
 gi|315364515|pdb|3OB7|D Chain D, Human Thymidylate Synthase R163k With Cys 195 Covalently
           Modified By Glutathione
 gi|315364516|pdb|3OB7|E Chain E, Human Thymidylate Synthase R163k With Cys 195 Covalently
           Modified By Glutathione
          Length = 313

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|241765073|ref|ZP_04763065.1| Thymidylate synthase [Acidovorax delafieldii 2AN]
 gi|241365310|gb|EER60132.1| Thymidylate synthase [Acidovorax delafieldii 2AN]
          Length = 286

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 153/273 (56%), Positives = 187/273 (68%), Gaps = 11/273 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DL+RHV   G D+ DRTG GT+S FG+QMRFDL +GFPL+TTKKVH KS++ ELLWF
Sbjct: 14  QYEDLMRHVFTHGVDKGDRTGTGTKSVFGHQMRFDLREGFPLVTTKKVHLKSIIVELLWF 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQS 118
           L G S+  +L   GV+IWDEWA KDG+LGP+YGVQWRSWP          IDQI  ++ +
Sbjct: 74  LTGSSSNLWLKERGVTIWDEWARKDGDLGPVYGVQWRSWPAPTPENPRGHIDQIQQVIDT 133

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVF 171
           L+ +P SRR IVSAWNVA +DKMAL PCH  FQFYV         G LSCQLYQRS D+F
Sbjct: 134 LKTNPDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPAQEPGGRGTLSCQLYQRSADIF 193

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLT M+A       G+FI T GD H+Y+NH EQ   QL R+P   P + 
Sbjct: 194 LGVPFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHHEQVRTQLERAPYPYPTLR 253

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           I      +  ++YEDF +  Y+ H AI A V+V
Sbjct: 254 IKRRPDSIFDYQYEDFEVLDYQCHPAIKAPVAV 286


>gi|260549117|ref|ZP_05823338.1| thymidylate synthase [Acinetobacter sp. RUH2624]
 gi|260407845|gb|EEX01317.1| thymidylate synthase [Acinetobacter sp. RUH2624]
          Length = 280

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/280 (55%), Positives = 196/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA           + ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLGVGDFVWTGGDTHLYANHFEQAKLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP + D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|323253293|gb|EGA37122.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
          Length = 252

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 145/249 (58%), Positives = 187/249 (75%)

Query: 16  SDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRH 75
               D TG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH +
Sbjct: 4   HRENDGTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHEN 63

Query: 76  GVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
            V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ DP SRR IVSAWNV
Sbjct: 64  NVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNV 123

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
             +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LL  M+A      
Sbjct: 124 GELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLD 183

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPH 255
            G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L  +R++DF +  Y+PH
Sbjct: 184 VGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPH 243

Query: 256 AAILAKVSV 264
             I A V++
Sbjct: 244 PGIKAPVAI 252


>gi|99081570|ref|YP_613724.1| thymidylate synthase [Ruegeria sp. TM1040]
 gi|123378854|sp|Q1GFV4|TYSY_SILST RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|99037850|gb|ABF64462.1| thymidylate synthase [Ruegeria sp. TM1040]
          Length = 277

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 146/277 (52%), Positives = 194/277 (70%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D L+H++  G +  DRTG GT S FG Q R+DL++GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYHDALQHILDHGVETTDRTGTGTLSCFGMQQRYDLAEGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P              Y   
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGYQWRKFPRLELAEGTLGDEPLYRAG 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQIS ++  +R  P SRR IV+AWN   +  MALPPCH L+Q  +  GK+  QLYQRS
Sbjct: 121 TVDQISELLDMIRKSPDSRRLIVTAWNPGDVPDMALPPCHSLWQLRILGGKMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LL  MLA V G++ G F+HT+GD H+Y+NH EQ  LQLSRSP++L
Sbjct: 181 ADMFLGVPFNIASYALLLHMLAHVTGYEVGSFVHTMGDAHIYSNHMEQVKLQLSRSPKSL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PQ+ I  ++  +  F+YEDF +  Y+P   I A V+V
Sbjct: 241 PQLRIARDVSSIFDFKYEDFEILGYDPDPVIKAPVAV 277


>gi|15988336|pdb|1JU6|A Chain A, Human Thymidylate Synthase Complex With Dump And Ly231514,
           A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988337|pdb|1JU6|B Chain B, Human Thymidylate Synthase Complex With Dump And Ly231514,
           A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988338|pdb|1JU6|C Chain C, Human Thymidylate Synthase Complex With Dump And Ly231514,
           A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988339|pdb|1JU6|D Chain D, Human Thymidylate Synthase Complex With Dump And Ly231514,
           A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988342|pdb|1JUJ|A Chain A, Human Thymidylate Synthase Bound To Dump And Ly231514, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988343|pdb|1JUJ|B Chain B, Human Thymidylate Synthase Bound To Dump And Ly231514, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988344|pdb|1JUJ|C Chain C, Human Thymidylate Synthase Bound To Dump And Ly231514, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
 gi|15988345|pdb|1JUJ|D Chain D, Human Thymidylate Synthase Bound To Dump And Ly231514, A
           Pyrrolo(2,3-D)pyrimidine-Based Antifolate
          Length = 313

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G ++ DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVEKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|297702332|ref|XP_002828137.1| PREDICTED: thymidylate synthase-like isoform 1 [Pongo abelii]
 gi|297702334|ref|XP_002828138.1| PREDICTED: thymidylate synthase-like isoform 2 [Pongo abelii]
          Length = 313

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|30584493|gb|AAP36499.1| Homo sapiens thymidylate synthetase [synthetic construct]
 gi|60826011|gb|AAX36743.1| thymidylate synthetase [synthetic construct]
 gi|61365335|gb|AAX42692.1| thymidylate synthetase [synthetic construct]
 gi|61371785|gb|AAX43730.1| thymidylate synthetase [synthetic construct]
 gi|61371791|gb|AAX43731.1| thymidylate synthetase [synthetic construct]
          Length = 314

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|4507751|ref|NP_001062.1| thymidylate synthase [Homo sapiens]
 gi|136611|sp|P04818|TYSY_HUMAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|37479|emb|CAA26178.1| unnamed protein product [Homo sapiens]
 gi|220136|dbj|BAA00472.1| thymidylate synthase [Homo sapiens]
 gi|12803483|gb|AAH02567.1| Thymidylate synthetase [Homo sapiens]
 gi|15530267|gb|AAH13919.1| Thymidylate synthetase [Homo sapiens]
 gi|21104406|dbj|BAB93473.1| thymidylate synthetase [Homo sapiens]
 gi|30582461|gb|AAP35457.1| thymidylate synthetase [Homo sapiens]
 gi|53733365|gb|AAH83512.1| TYMS protein [Homo sapiens]
 gi|60655085|gb|AAX32106.1| thymidylate synthetase [synthetic construct]
 gi|60814259|gb|AAX36293.1| thymidylate synthetase [synthetic construct]
 gi|61355304|gb|AAX41125.1| thymidylate synthetase [synthetic construct]
 gi|119622126|gb|EAX01721.1| thymidylate synthetase, isoform CRA_f [Homo sapiens]
 gi|123982668|gb|ABM83075.1| thymidylate synthetase [synthetic construct]
 gi|189054310|dbj|BAG36830.1| unnamed protein product [Homo sapiens]
 gi|307685173|dbj|BAJ20517.1| thymidylate synthetase [synthetic construct]
          Length = 313

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|290560090|pdb|3EF9|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560119|pdb|3GH0|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|290560086|pdb|3EDW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560094|pdb|3EJL|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560095|pdb|3EJL|B Chain B, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560096|pdb|3EJL|C Chain C, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560097|pdb|3EJL|D Chain D, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|114672489|ref|XP_001150437.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
 gi|114672491|ref|XP_001150499.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
 gi|114672493|ref|XP_001150558.1| PREDICTED: thymidylate synthase isoform 5 [Pan troglodytes]
          Length = 313

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++++P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKSNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|229079406|ref|ZP_04211948.1| Thymidylate synthase [Bacillus cereus Rock4-2]
 gi|228703939|gb|EEL56383.1| Thymidylate synthase [Bacillus cereus Rock4-2]
          Length = 318

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/313 (47%), Positives = 196/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ YL +H  +IW                                         
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE+++K G LG +YG QWR+W    G   DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETFDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED  +  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLKIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|149721010|ref|XP_001492275.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Equus
           caballus]
          Length = 312

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R++L   FPLLTTK+V WK V+ ELLWF
Sbjct: 31  QYLGQIEHILRSGFRKEDRTGTGTLSVFGLQARYNLRDEFPLLTTKRVFWKGVLEELLWF 90

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N + L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 91  IKGSTNANELSCKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYKDMDS 150

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 151 DYSGQGVDQLQKVINTIKTNPDDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 210

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH +    QL R
Sbjct: 211 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIDPLKTQLQR 270

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF L  Y PH  I  +++V
Sbjct: 271 EPRPFPKLKILRKVETIDDFKAEDFQLEGYHPHPTIRMEMAV 312


>gi|327269847|ref|XP_003219704.1| PREDICTED: thymidylate synthase-like [Anolis carolinensis]
          Length = 307

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+ ++ +++FG  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 26  QYLNQIQQILRFGHKKEDRTGTGTLSLFGMQARYSLRDDFPLLTTKRVFWKGVLEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IW+                ++G+LGP+YG QWR +         
Sbjct: 86  IKGSTNAKELSTKGVKIWEANGSRQFLDQQGFLSREEGDLGPVYGFQWRHFGAEYKDMNT 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ ++R +P  RR I+ AWN   I  MALPPCH L QFYV NG+LSCQ
Sbjct: 146 DYTGQGVDQLQQVIDTIRNNPDDRRIIMCAWNPKDISAMALPPCHALCQFYVVNGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E   +QL R
Sbjct: 206 LYQRSGDMGLGVPFNIASYSLLTSMIAHVTGLKPGEFIHTLGDAHIYLNHIEPLKIQLQR 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   + ++  F+ +DF +  Y PH  I  +++V
Sbjct: 266 QPRPFPKLKILRKVENINDFKADDFEIEGYNPHPTIKMEMAV 307


>gi|320094077|ref|ZP_08025892.1| thymidylate synthase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978968|gb|EFW10496.1| thymidylate synthase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 265

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/263 (56%), Positives = 186/263 (70%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY DLL  V+  G  + DRTG GTRS FG Q+R+DLS+GFPL+TTK+VH KSVV ELLW
Sbjct: 4   RQYEDLLARVMAEGVAKGDRTGTGTRSVFGAQLRYDLSRGFPLITTKRVHLKSVVGELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL G SNV +L  HG+ IW+EWAD+ GELGP+YGVQWRSW    G  IDQIS+++++LR 
Sbjct: 64  FLSGSSNVGWLQEHGIRIWNEWADEGGELGPVYGVQWRSWNAGGGTRIDQISNVLETLRT 123

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV  + +MAL PCH  FQ Y  +G+LS QLYQRS D+FLG+PFNIASY
Sbjct: 124 DPDSRRMVVSAWNVGDLPQMALEPCHAFFQLYAAHGRLSLQLYQRSADLFLGVPFNIASY 183

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           SLLT M A   G Q G+FI T GD H+Y+NH EQ   QLSR P   P++ +      +  
Sbjct: 184 SLLTHMFAQQAGLQVGDFIWTGGDCHIYSNHTEQVAEQLSREPYPFPRLELA-KAPSMFD 242

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + ++D ++  Y+ H  I A V+V
Sbjct: 243 YSFDDVSVEGYQHHPTIKAPVAV 265


>gi|242068437|ref|XP_002449495.1| hypothetical protein SORBIDRAFT_05g016730 [Sorghum bicolor]
 gi|241935338|gb|EES08483.1| hypothetical protein SORBIDRAFT_05g016730 [Sorghum bicolor]
          Length = 521

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L+  +I+ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW
Sbjct: 239 YQYLNLVEDIIRSGAQKNDRTGTGTMSKFGCQMRFNLRKNFPLLTTKRVFWRGVVEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F+ G +N   L   G+ IWD                ++G+LGP+YG QWR +        
Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN + + KMALPPCH   QFYV+NG+LSC
Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIIMSAWNPSDLKKMALPPCHMFAQFYVENGELSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     G+F+H +GD H+Y  H    + Q+ 
Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRTHVRALEEQIQ 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP+  D+ SF   DF L  Y+PH  I  K++V
Sbjct: 479 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKIEMKMAV 521


>gi|229017549|ref|ZP_04174449.1| Thymidylate synthase [Bacillus cereus AH1273]
 gi|229023767|ref|ZP_04180256.1| Thymidylate synthase [Bacillus cereus AH1272]
 gi|228737564|gb|EEL88071.1| Thymidylate synthase [Bacillus cereus AH1272]
 gi|228743774|gb|EEL93876.1| Thymidylate synthase [Bacillus cereus AH1273]
          Length = 318

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ YL +H  +IW                                         
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE++ K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKSVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|308048436|ref|YP_003912002.1| thymidylate synthase [Ferrimonas balearica DSM 9799]
 gi|307630626|gb|ADN74928.1| thymidylate synthase [Ferrimonas balearica DSM 9799]
          Length = 277

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/277 (55%), Positives = 188/277 (67%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL HV+  G DR DRTG GTRS FG+QMRFDL +GFP+LTTKK+HWKS+VHE+L
Sbjct: 1   MKAYLDLLNHVMTNGVDRDDRTGTGTRSVFGHQMRFDLGEGFPMLTTKKLHWKSIVHEML 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV YL  +GV IW+EWA ++GELGP+YGVQWR W   DG  IDQI+ +++ L+
Sbjct: 61  WFLSGDTNVRYLQENGVRIWNEWATEEGELGPVYGVQWRHWKTPDGQEIDQIAKVIEDLK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWN A +              KMAL PCH   QFYV NGKLSC L QRS
Sbjct: 121 VRPNSRRIIVSAWNPADLPDETCSPAANAEAGKMALAPCHAFIQFYVANGKLSCMLTQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+ FNI SY+LLT M+A   G + GEFI + GDVH+Y NHFEQ   QL R P  L
Sbjct: 181 VDCFLGLAFNIPSYALLTHMVAQQTGLEVGEFIWSGGDVHIYKNHFEQVATQLQRQPGAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I      +  +R+EDF L  Y+    I A V++
Sbjct: 241 PKLEILRRPDSIFDYRFEDFALHDYQAQPHIPAPVAI 277


>gi|262202109|ref|YP_003273317.1| thymidylate synthase [Gordonia bronchialis DSM 43247]
 gi|262085456|gb|ACY21424.1| thymidylate synthase [Gordonia bronchialis DSM 43247]
          Length = 270

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 153/261 (58%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  V++ G+ + DRTG GTRS FG+Q+R+DL+ GFPL+TTKKVH KS+++ELLWFL
Sbjct: 11  YEDLLALVLETGTPKDDRTGTGTRSLFGHQLRYDLAAGFPLITTKKVHLKSIIYELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L   GV+IWDEWAD +GELGP+YGVQWRSWP   G  IDQI+  ++ LR DP
Sbjct: 71  RGDSNVRWLQERGVTIWDEWADDNGELGPVYGVQWRSWPTPSGEHIDQIAGALRLLRTDP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  I +MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 131 DSRRNIVSAWNVGEIPQMALPPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   GEF+ T GD H+Y+NH +Q  LQLSR P   P++ +  +   +  + 
Sbjct: 191 LTHMMAQQAGLGVGEFVWTGGDCHIYDNHVDQVRLQLSRDPYPYPKLEL-RHRDSIFGYE 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y  H  I A V+V
Sbjct: 250 FDDIAVVDYRSHPPIKAPVAV 270


>gi|9507217|ref|NP_062052.1| thymidylate synthase [Rattus norvegicus]
 gi|1174841|sp|P45352|TYSY_RAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|4558189|pdb|1RTS|A Chain A, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|4558190|pdb|1RTS|B Chain B, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|4558226|pdb|2TSR|A Chain A, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|4558227|pdb|2TSR|B Chain B, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|4558228|pdb|2TSR|C Chain C, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|4558229|pdb|2TSR|D Chain D, Thymidylate Synthase From Rat In Ternary Complex With Dump
           And Tomudex
 gi|207328|gb|AAA92340.1| thymidylate synthase [Rattus norvegicus]
 gi|117558487|gb|AAI26094.1| Thymidylate synthetase [Rattus norvegicus]
 gi|149036310|gb|EDL90969.1| thymidylate synthase [Rattus norvegicus]
 gi|1095492|prf||2109225A thymidylate synthase
          Length = 307

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 26  QYLRQVEHIMRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 86  IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGADYKDMDS 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 266 EPRPFPKLRILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307


>gi|13096425|pdb|1HW4|A Chain A, Structure Of Thymidylate Synthase Suggests Advantages Of
           Chemotherapy With Noncompetitive Inhibitors
          Length = 355

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 74  QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 133

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 134 IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 193

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 194 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPCHALXQFYVVNSELSCQ 253

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 254 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 313

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 314 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 355


>gi|229190322|ref|ZP_04317323.1| Thymidylate synthase [Bacillus cereus ATCC 10876]
 gi|228593106|gb|EEK50924.1| Thymidylate synthase [Bacillus cereus ATCC 10876]
          Length = 318

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 151/313 (48%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ YL +H  +IW                                         
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE+++K G LG +YG QWRSW    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRSWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|219111327|ref|XP_002177415.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411950|gb|EEC51878.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 495

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/284 (46%), Positives = 178/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYLDL RH++  G  R DRTG GT S FG QMRF L  G  PLLTTK+V W+ V  ELL
Sbjct: 212 RQYLDLCRHILDHGVRRGDRTGTGTLSQFGTQMRFSLRDGTLPLLTTKRVFWRGVAEELL 271

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+ G++N + L    + IWD    +D            G+LGP+YG QWR +       
Sbjct: 272 WFVAGNTNANDLAAKDIRIWDGNGSRDFLDSRGLGHREVGDLGPVYGFQWRHFGATYGTM 331

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ++  +  ++ +P  RR I+SAWN A ++ MALPPCH   QFYV    LS
Sbjct: 332 HDDYTGKGVDQLAECIDKIKNNPEDRRIILSAWNPADLELMALPPCHMFCQFYVRTASLS 391

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH +    QL
Sbjct: 392 CQMYQRSADMGLGVPFNIASYALLTHMIAHVTGRKPGDFVHTIGDAHVYLNHVDALQTQL 451

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+PR  P++ INP+  ++  F + DFT+  Y+PH  I  +++V
Sbjct: 452 ERTPRAFPKLQINPDKQNIDDFVFADFTVVGYQPHKTIKMEMAV 495


>gi|306774132|ref|NP_001182436.1| thymidylate synthase [Macaca mulatta]
          Length = 313

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRGEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|23466213|ref|NP_696816.1| thymidylate synthase [Bifidobacterium longum NCC2705]
 gi|239621560|ref|ZP_04664591.1| thymidylate synthase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|62901377|sp|Q8G3T9|TYSY_BIFLO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|23326956|gb|AAN25452.1| thymidylate synthase [Bifidobacterium longum NCC2705]
 gi|239515435|gb|EEQ55302.1| thymidylate synthase [Bifidobacterium longum subsp. infantis CCUG
           52486]
          Length = 266

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/265 (56%), Positives = 188/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG QMRFDLSK FPLLTTK V +K + +ELLWFL
Sbjct: 3   YEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFDLSKYFPLLTTKTVFFKGLAYELLWFL 62

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP          IDQIS+++  +
Sbjct: 63  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPEDPNRTIDQISNVLDLI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++KMALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIA
Sbjct: 123 KHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVADDKLSCQLYQRSCDMFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P + I      L
Sbjct: 183 SYSLLTMMMAQQAGLKPGEFVWTGGDCHVYDNHVDQFLEQLGRKPYPYPTIEI-RKADSL 241

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 242 FDYQYEDFKVVGYQHHPTIKAPVAV 266


>gi|293610254|ref|ZP_06692555.1| thymidylate synthase [Acinetobacter sp. SH024]
 gi|292827486|gb|EFF85850.1| thymidylate synthase [Acinetobacter sp. SH024]
          Length = 280

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + VSIWDEWA           + ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQARLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP + DL  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEVKDLFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|229196462|ref|ZP_04323208.1| Thymidylate synthase [Bacillus cereus m1293]
 gi|228587032|gb|EEK45104.1| Thymidylate synthase [Bacillus cereus m1293]
          Length = 318

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 151/313 (48%), Positives = 199/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESEEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++I+NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLILNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|163940030|ref|YP_001644914.1| thymidylate synthase [Bacillus weihenstephanensis KBAB4]
 gi|163862227|gb|ABY43286.1| Thymidylate synthase [Bacillus weihenstephanensis KBAB4]
          Length = 318

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ YL +H  +IW                                         
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE++ K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|14277914|pdb|1HZW|A Chain A, Crystal Structure Of Human Thymidylate Synthase
 gi|14277915|pdb|1HZW|B Chain B, Crystal Structure Of Human Thymidylate Synthase
 gi|14277916|pdb|1I00|A Chain A, Crystal Structure Of Human Thymidylate Synthase, Ternary
           Complex With Dump And Tomudex
 gi|14277917|pdb|1I00|B Chain B, Crystal Structure Of Human Thymidylate Synthase, Ternary
           Complex With Dump And Tomudex
          Length = 290

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 9   QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 68

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 69  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 128

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 129 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 188

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 189 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 248

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 249 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 290


>gi|307826303|ref|ZP_07656510.1| thymidylate synthase [Methylobacter tundripaludum SV96]
 gi|307732659|gb|EFO03529.1| thymidylate synthase [Methylobacter tundripaludum SV96]
          Length = 277

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/277 (54%), Positives = 199/277 (71%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL ++I+ GS + DRTG GT S FG+QMRF L++GFPL+TTKK+H KS+++EL+
Sbjct: 1   MKPYLQLLDNIIQQGSPKGDRTGSGTLSIFGHQMRFPLAEGFPLVTTKKIHLKSIIYELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+S+LH++ V+IW+EWAD++GELGP+YG QWRSWP  DG  IDQI  +++ L+
Sbjct: 61  WFLKGETNLSFLHQYNVNIWNEWADQNGELGPVYGHQWRSWPTPDGRHIDQIQQVIEQLK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWNVA +              KMAL PCH  FQFYV +GKLSCQLYQRS
Sbjct: 121 NTPNSRRIIVSAWNVADLPDESISPQQNVALGKMALAPCHAFFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASY+LLT M+A     + G+F+ T GDVHLY NH +QA+LQL+R P  L
Sbjct: 181 CDTFLGLPFNIASYALLTHMVAQQCDLEVGDFVWTGGDVHLYLNHQQQANLQLTRKPYAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF +  Y+ H  I A +SV
Sbjct: 241 PTLRIKRRPESIFDYQYEDFEVIDYQAHEHIKAPISV 277


>gi|240129500|gb|ACS44779.1| thymidylate synthase [Litopenaeus vannamei]
          Length = 289

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 135/284 (47%), Positives = 184/284 (64%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLDL+R +++ G+ + DRTG GT S FG QMR+ L  G FPLLTTK+V W+ V  ELL
Sbjct: 6   YQYLDLIRQIMRTGNRKGDRTGTGTISMFGAQMRYSLRDGIFPLLTTKRVFWRGVAEELL 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+RG +N   L    + IWD  + K+            G+LGP+YG QWR +       
Sbjct: 66  WFVRGSTNAKELQEKDIHIWDGNSSKEFLNKMGFHDREEGDLGPVYGFQWRHFGAPYADM 125

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+  ++ +++ +P  RR I+ AWN   + KMALPPCHCL QFYV NG+LS
Sbjct: 126 HTDYTGQGVDQLQQVIDTIKNNPDDRRIIMCAWNPVDVPKMALPPCHCLCQFYVANGELS 185

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V   + G+F+HTLGD H+Y+NH E  + QL
Sbjct: 186 CQLYQRSADMGLGVPFNIASYALLTYMIAHVTDLKPGDFVHTLGDAHVYSNHCEALEEQL 245

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P + I   + ++  F++EDF L  Y+PH  I  +++V
Sbjct: 246 KREPRPFPSLKIKRKVENISDFKFEDFELDGYKPHPKIKMEMAV 289


>gi|62898305|dbj|BAD97092.1| thymidylate synthetase variant [Homo sapiens]
          Length = 313

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PF+IASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFDIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|290560115|pdb|3GG5|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560116|pdb|3GG5|B Chain B, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560117|pdb|3GG5|C Chain C, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
 gi|290560118|pdb|3GG5|D Chain D, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|229161214|ref|ZP_04289201.1| Thymidylate synthase [Bacillus cereus R309803]
 gi|228622310|gb|EEK79149.1| Thymidylate synthase [Bacillus cereus R309803]
          Length = 318

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|171914370|ref|ZP_02929840.1| thymidylate synthase [Verrucomicrobium spinosum DSM 4136]
          Length = 264

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 164/264 (62%), Positives = 211/264 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +Y  LL+ V++ G+ R+DRTGVG  S FG Q R+DLS GFP+LTTKK+H +S++HELL
Sbjct: 1   MLEYQRLLKKVLEHGNFRQDRTGVGAYSVFGEQSRYDLSAGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YLH + V+IWDEWAD++G LGP+YG QWR W   DG V DQI+ ++ S++
Sbjct: 61  WFLKGDTNIKYLHENKVTIWDEWADEEGNLGPVYGAQWRRWQGADGLVHDQIADVIASIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +PYSRRHIVSAWNVA I +MALPPCH +FQF+VD G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPYSRRHIVSAWNVARIGEMALPPCHLMFQFFVDQGRLSCQLYQRSADLFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLTMM+A V   Q GEF+HT GD+HLY NH +QA LQL R PR+LP M INP + D+ 
Sbjct: 181 YALLTMMVAQVCDLQPGEFVHTFGDLHLYANHLDQARLQLEREPRSLPVMKINPEVRDID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F++EDFTL +Y+P  AI A+++V
Sbjct: 241 GFKFEDFTLENYDPWPAIKAEIAV 264


>gi|290560120|pdb|3GH2|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|169634445|ref|YP_001708181.1| thymidylate synthase [Acinetobacter baumannii SDF]
 gi|169153237|emb|CAP02337.1| thymidylate synthase (TS) (TSase) [Acinetobacter baumannii]
          Length = 280

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 156/280 (55%), Positives = 198/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + V+IWDEWA           + ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD+HLY NHFEQA LQL R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDIHLYANHFEQAKLQLMREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP++ D+  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|121605666|ref|YP_982995.1| thymidylate synthase [Polaromonas naphthalenivorans CJ2]
 gi|166231723|sp|A1VQZ6|TYSY_POLNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120594635|gb|ABM38074.1| thymidylate synthase [Polaromonas naphthalenivorans CJ2]
          Length = 276

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/270 (57%), Positives = 193/270 (71%), Gaps = 7/270 (2%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DL+R V   G+ + DRTG GT+S FG+QMRFDL++GFPL+TTKKVH KS++ ELLW
Sbjct: 7   HQYEDLMRLVATQGAFKADRTGTGTKSVFGHQMRFDLNEGFPLVTTKKVHLKSIIQELLW 66

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL G S+  +L   GV+IW+EWA  DG+LGP+YGVQWRSWP  DG  IDQI+ ++++L+ 
Sbjct: 67  FLTGSSSNHWLTERGVTIWNEWARADGDLGPVYGVQWRSWPTPDGGHIDQIAEVIKTLKT 126

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGI 174
           +P SRR IVSAWNVA +DKMAL PCH LFQFYV         GKLSCQLYQRS D+FLG+
Sbjct: 127 NPDSRRIIVSAWNVADLDKMALMPCHALFQFYVAPATEAGGKGKLSCQLYQRSADIFLGV 186

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT M+A       G+FI T GD H+Y+NH EQ  LQL R+P   P + I  
Sbjct: 187 PFNIASYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHQEQVALQLGRAPFAYPLLHIRR 246

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               +  +++EDF    Y+ H AI A V+V
Sbjct: 247 KPDSIFDYQFEDFEFLDYQHHPAIKAPVAV 276


>gi|227832620|ref|YP_002834327.1| Thymidylate synthase [Corynebacterium aurimucosum ATCC 700975]
 gi|262182896|ref|ZP_06042317.1| thymidylate synthase [Corynebacterium aurimucosum ATCC 700975]
 gi|254790235|sp|C3PEY5|TYSY_CORA7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|227453636|gb|ACP32389.1| Thymidylate synthase [Corynebacterium aurimucosum ATCC 700975]
          Length = 268

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/261 (57%), Positives = 192/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GT S FG Q+R++L++ FPLLTTKKV++  V+ ELLWFL
Sbjct: 9   YEDLLRRVLEEGAPKGDRTGTGTLSLFGAQLRYNLAESFPLLTTKKVYFHGVIGELLWFL 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  + V IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQI   + +L+ +P
Sbjct: 69  RGDSNVKWLQENKVRIWNEWADEDGELGPVYGVQWRSWPTPDGQHIDQIQVALDTLKNNP 128

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNV+ +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFN+ASY+ 
Sbjct: 129 DSRRNLVSAWNVSELDKMALMPCHLLFQLYVADGKLSMQVYQRSADMFLGVPFNLASYAA 188

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GE I T GD H+YN+H EQ   QLSR PR  PQ+ ++     L  + 
Sbjct: 189 LTHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSRQPREYPQLKLH-KAESLFDYD 247

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++DF +  Y+PH  I A+VSV
Sbjct: 248 FDDFEVIGYDPHPTIKAQVSV 268


>gi|30020325|ref|NP_831956.1| thymidylate synthase [Bacillus cereus ATCC 14579]
 gi|206972712|ref|ZP_03233650.1| thymidylate synthase [Bacillus cereus AH1134]
 gi|218231958|ref|YP_002366936.1| thymidylate synthase [Bacillus cereus B4264]
 gi|228952578|ref|ZP_04114654.1| Thymidylate synthase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228958506|ref|ZP_04120226.1| Thymidylate synthase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229043979|ref|ZP_04191671.1| Thymidylate synthase [Bacillus cereus AH676]
 gi|229069766|ref|ZP_04203051.1| Thymidylate synthase [Bacillus cereus F65185]
 gi|229091229|ref|ZP_04222449.1| Thymidylate synthase [Bacillus cereus Rock3-42]
 gi|229109679|ref|ZP_04239265.1| Thymidylate synthase [Bacillus cereus Rock1-15]
 gi|229127635|ref|ZP_04256624.1| Thymidylate synthase [Bacillus cereus BDRD-Cer4]
 gi|229144831|ref|ZP_04273228.1| Thymidylate synthase [Bacillus cereus BDRD-ST24]
 gi|229178605|ref|ZP_04305969.1| Thymidylate synthase [Bacillus cereus 172560W]
 gi|296502804|ref|YP_003664504.1| thymidylate synthase [Bacillus thuringiensis BMB171]
 gi|33301701|sp|Q81E05|TYSY_BACCR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|29895876|gb|AAP09157.1| Thymidylate synthase [Bacillus cereus ATCC 14579]
 gi|206732367|gb|EDZ49551.1| thymidylate synthase [Bacillus cereus AH1134]
 gi|218159915|gb|ACK59907.1| thymidylate synthase [Bacillus cereus B4264]
 gi|228604763|gb|EEK62220.1| Thymidylate synthase [Bacillus cereus 172560W]
 gi|228638553|gb|EEK94986.1| Thymidylate synthase [Bacillus cereus BDRD-ST24]
 gi|228655712|gb|EEL11561.1| Thymidylate synthase [Bacillus cereus BDRD-Cer4]
 gi|228673720|gb|EEL28978.1| Thymidylate synthase [Bacillus cereus Rock1-15]
 gi|228692127|gb|EEL45866.1| Thymidylate synthase [Bacillus cereus Rock3-42]
 gi|228713387|gb|EEL65277.1| Thymidylate synthase [Bacillus cereus F65185]
 gi|228725361|gb|EEL76626.1| Thymidylate synthase [Bacillus cereus AH676]
 gi|228801133|gb|EEM48030.1| Thymidylate synthase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228807044|gb|EEM53587.1| Thymidylate synthase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|296323856|gb|ADH06784.1| thymidylate synthase [Bacillus thuringiensis BMB171]
          Length = 318

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ YL +H  +IW                                         
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE+++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|297798456|ref|XP_002867112.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312948|gb|EFH43371.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 565

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 129/281 (45%), Positives = 173/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L++ +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 285 YLNLVKEIISNGNLKGDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 344

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD  A             ++G+LGP+YG QWR +         D
Sbjct: 345 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 404

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV +G+LSCQ+
Sbjct: 405 YTGQGFDQLLDVIHKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVADGELSCQM 464

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT +LA V     G+FIH +GD H+Y NH      QL   
Sbjct: 465 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 524

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + I P   D+ SF  +DF L  Y+PH  I  K++V
Sbjct: 525 PKPFPVLKIKPEKKDIDSFVSDDFELIGYDPHKKIDMKMAV 565


>gi|227548298|ref|ZP_03978347.1| thymidylate synthase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079616|gb|EEI17579.1| thymidylate synthase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 266

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/261 (59%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ GS + DRTG GT S FG Q+R+DLS+ FPLLTTKKV++K VV ELLWFL
Sbjct: 7   YEDLLRDILENGSPKGDRTGTGTLSVFGRQLRYDLSQSFPLLTTKKVYFKGVVGELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  + + IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQIS  ++ LR DP
Sbjct: 67  RGESNVRWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISESLRLLREDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNV+ +DKMAL PCH LFQ YV +G+LS Q+YQRS D+FLG+PFNIASYSL
Sbjct: 127 ESRRNLVSAWNVSELDKMALMPCHLLFQLYVADGRLSMQVYQRSADMFLGVPFNIASYSL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT+M A   G   GE I T GD H+YNNH EQ   QLSR PR  PQ+ +      L  + 
Sbjct: 187 LTLMFAQQAGLTVGELIWTGGDCHIYNNHIEQVKEQLSREPRPYPQLEL-RKAPSLFEYS 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y+PH  I A+V+V
Sbjct: 246 FDDIKVVGYDPHPTITAEVAV 266


>gi|228997327|ref|ZP_04156949.1| Thymidylate synthase [Bacillus mycoides Rock3-17]
 gi|229004952|ref|ZP_04162679.1| Thymidylate synthase [Bacillus mycoides Rock1-4]
 gi|228756300|gb|EEM05618.1| Thymidylate synthase [Bacillus mycoides Rock1-4]
 gi|228762419|gb|EEM11344.1| Thymidylate synthase [Bacillus mycoides Rock3-17]
          Length = 318

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL ++  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQNNNNIWNEWAFKSWVESDAYEGPDMTDFGLRSQQDEEFKKQYDEQMD 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        ++ G LG +YG QWR+W    G  IDQ+  +++ ++  P SRR +VS
Sbjct: 126 LFKKNVLEDDDFANQYGYLGDVYGKQWRAWKTTAGETIDQLKDVIEMIKKTPDSRRLLVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P + +NP++  +  F  ED TL  
Sbjct: 246 CGLEAGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSVFDFEMEDLTLEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229059909|ref|ZP_04197284.1| Thymidylate synthase [Bacillus cereus AH603]
 gi|228719454|gb|EEL71057.1| Thymidylate synthase [Bacillus cereus AH603]
          Length = 318

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ YL +H  +IW                                         
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKRYDEQME 125

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE++ K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|212212099|ref|YP_002303035.1| thymidylate synthase [Coxiella burnetii CbuG_Q212]
 gi|212010509|gb|ACJ17890.1| thymidylate synthase [Coxiella burnetii CbuG_Q212]
          Length = 264

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/264 (56%), Positives = 200/264 (75%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+ ++  G  + DRTG+GT+S FGY+MRF+L +GFPL+TTKK+H KSV++ELL
Sbjct: 1   MKEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREGFPLVTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +L+ +GV+IWDEWAD++G+LGPIYG QWR W   DG  +DQ+  +++ ++
Sbjct: 61  WFLRGDTNIQFLNDNGVTIWDEWADENGDLGPIYGKQWRRWHCPDGRTVDQMQRLIREIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  +D+MALPPCH LFQFYV +G LSC+L QRS D FLG+PFNIAS
Sbjct: 121 TNPDSRRLIVSAWNVGELDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT ++A     + GEFI + GD H+YN H +Q   QLSR PR LPQ+IIN +   L 
Sbjct: 181 YSLLTHLIARQCNLKAGEFIWSGGDCHIYNTHQDQVSTQLSREPRALPQLIINRDPSSLY 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + + DF++ +Y PH AI A V+V
Sbjct: 241 DYNFNDFSIVNYHPHLAIKAPVAV 264


>gi|289195|gb|AAA32789.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
 gi|3096926|emb|CAA18836.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
 gi|7270407|emb|CAB80174.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
 gi|27808622|gb|AAO24591.1| At4g34570 [Arabidopsis thaliana]
          Length = 518

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/281 (46%), Positives = 174/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L++ +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 238 YLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRNFPLLTTKRVFWRGVVEELLWFI 297

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD  A             ++G+LGP+YG QWR +         D
Sbjct: 298 SGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 357

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 358 YTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 417

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT +LA V     G+FIH +GD H+Y NH      QL   
Sbjct: 418 YQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAHVYKNHVRPLQEQLENP 477

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   D+ SF  +DF L  Y+PH  I  K++V
Sbjct: 478 PKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 518


>gi|118465321|ref|YP_882829.1| thymidylate synthase [Mycobacterium avium 104]
 gi|254776088|ref|ZP_05217604.1| thymidylate synthase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|166231711|sp|A0QIU1|TYSY_MYCA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|118166608|gb|ABK67505.1| thymidylate synthase [Mycobacterium avium 104]
          Length = 266

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 164/261 (62%), Positives = 199/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH KSVV+ELLWFL
Sbjct: 7   YEDLLRLVLDRGTAKSDRTGTGTRSLFGQQLRYDLSAGFPLITTKKVHLKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +LHRHGV+IWDEWA   G+LGPIYGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNVDWLHRHGVTIWDEWASDTGDLGPIYGVQWRSWPTPSGEHIDQISAALDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGEIPRMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ  LQLSR PR  P++++  +   +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELVLA-HRDSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y+D  + +Y+PH AI A V+V
Sbjct: 246 YDDVVVHNYDPHPAIKAPVAV 266


>gi|88706383|ref|ZP_01104088.1| Thymidylate synthase [Congregibacter litoralis KT71]
 gi|88699319|gb|EAQ96433.1| Thymidylate synthase [Congregibacter litoralis KT71]
          Length = 277

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 145/277 (52%), Positives = 182/277 (65%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLR +++ G  + DRTG GT S FG Q R +L+ GFPLLTTKKVH +S+++EL+
Sbjct: 1   MRQYHDLLRDILENGVRKEDRTGTGTLSVFGRQFRHNLADGFPLLTTKKVHLRSIINELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV++L  HGVSIW+EWA + G+LGP+YG QWR+WP  DG  +DQI  ++  LR
Sbjct: 61  WFLNGDTNVAWLQEHGVSIWNEWATETGDLGPVYGKQWRAWPTQDGGEVDQIEYVLDCLR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR +  AWNV  +               MALPPCH L+QFYV  GKLS QLY RS
Sbjct: 121 HRPDSRRILFHAWNVEYLPDESLSPQENARAGRMALPPCHLLYQFYVAEGKLSAQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFN+AS ++L MMLA     + GE + + GD HLY NH EQ   QLSR PR L
Sbjct: 181 SDSFLGLPFNMASLAVLVMMLAQQADLEPGEIVVSTGDSHLYLNHMEQVQEQLSREPRPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  +R+EDF L  Y PH AI A V+V
Sbjct: 241 PTLAILRKPDSIYDYRFEDFELSGYNPHPAIPAPVAV 277


>gi|229085186|ref|ZP_04217431.1| Thymidylate synthase [Bacillus cereus Rock3-44]
 gi|228698123|gb|EEL50863.1| Thymidylate synthase [Bacillus cereus Rock3-44]
          Length = 318

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 151/313 (48%), Positives = 196/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL ++  +IW+EWA K+                                  
Sbjct: 66  FMKGDTNIRYLLQNNNNIWNEWAFKNWVESDAYEGPDMTDFGLRSQQDEEFKAQYDEQME 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR+W    G  IDQ+  +++ ++  P SRR +VS
Sbjct: 126 LFKKNVLENDAFANQYGYLGDVYGKQWRAWKTTVGETIDQLKDVIEMIKKTPDSRRLLVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P + +NP++     F  ED TL  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSAFDFEMEDLTLEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|164564740|dbj|BAF98221.1| CM0216.390.nc [Lotus japonicus]
          Length = 528

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/283 (46%), Positives = 175/283 (61%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL L++ +I  G+ + DRTG GT S FG QMRF+L + FPLLTTKKV W+ VV ELLW
Sbjct: 246 YKYLRLVQEIISEGTVKDDRTGTGTLSKFGCQMRFNLRRSFPLLTTKKVFWRGVVEELLW 305

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G ++   L   G+ IWD  A             ++G+LGP+YG QWR +        
Sbjct: 306 FISGSTSAKVLQEKGIHIWDGNASREYLDSIGLTEREEGDLGPVYGFQWRHFGARYTNMH 365

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV NG+LSC
Sbjct: 366 DDYSGKGFDQLLDVINKIKHNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSC 425

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT M+A V     G+FIH +GD H+Y NH +    QL 
Sbjct: 426 QMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVKPLQEQLQ 485

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             PR  P + INP   D+ SF   DF L  Y+PH  I  K++V
Sbjct: 486 NLPRPFPILKINPKKKDIDSFEATDFKLIGYDPHQKIQMKMAV 528


>gi|325124433|gb|ADY83956.1| thyA; thymidylate synthase (Ts) (TSase) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 280

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + VSIWDEWA           + ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR I+S WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I DL  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEIKDLFDFKFEDIEIVGYESHPAIKAPVAV 280


>gi|86141845|ref|ZP_01060369.1| thymidylate synthase [Leeuwenhoekiella blandensis MED217]
 gi|85831408|gb|EAQ49864.1| thymidylate synthase [Leeuwenhoekiella blandensis MED217]
          Length = 283

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 157/286 (54%), Positives = 204/286 (71%), Gaps = 25/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++H++  G+ + DRTG GT S FGYQMRFDLS+GFP++TTKK+H KS+++ELL
Sbjct: 1   MQQYHDLVKHILNNGAQKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  HGV IW+EWAD+DG LGP+YG QWR+W   +   IDQI  +++SL+
Sbjct: 61  WFLKGDTNIEYLKEHGVRIWNEWADEDGNLGPVYGHQWRNW---NSEEIDQIKEVIESLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNG---------K 158
            +P SRR +VSAWN +++              K ALPPCH  FQFYV  G         K
Sbjct: 118 NNPNSRRMLVSAWNPSVMPDTSKSFAENVANGKAALPPCHAFFQFYVAPGDPEAEDKRPK 177

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQLYQRS DVFLG+PFNIASY+L TMM+A V  +  G+FIHT GD H+YNNH EQ +L
Sbjct: 178 LSCQLYQRSADVFLGVPFNIASYALFTMMMAQVCDYAPGDFIHTFGDAHIYNNHIEQLNL 237

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL+R  R LP M +NP + D+ SF ++DF L +Y+PH  I  KV++
Sbjct: 238 QLTREIRKLPTMTLNPEVKDIFSFSFDDFKLENYDPHPHIKGKVAI 283


>gi|262380134|ref|ZP_06073289.1| thymidylate synthase [Acinetobacter radioresistens SH164]
 gi|262298328|gb|EEY86242.1| thymidylate synthase [Acinetobacter radioresistens SH164]
          Length = 280

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 160/280 (57%), Positives = 203/280 (72%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+H+++ G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRQYLDLLQHILEHGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP---DYDG-- 106
           WFL+GD+NV YL  + V+IWDEWA  +         GELGP+YG QWR++    + DG  
Sbjct: 61  WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPAGELGPVYGHQWRNFGATQNEDGSY 120

Query: 107 --NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             N +DQIS ++  ++ +P SRR IVS WN     ++ALPPCH LFQF+V NGKLSCQLY
Sbjct: 121 QKNGVDQISWLINEIKTNPNSRRLIVSGWNPKEASQVALPPCHTLFQFFVQNGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V   Q G+F+ T GD HLY NHF+QA LQL R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCDLQVGDFVWTGGDTHLYANHFDQARLQLGRDP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP +  +  F++ED  + +Y  H+AI A V+V
Sbjct: 241 LELCQLKLNPEVKSIFDFKFEDIEIINYHSHSAIKAPVAV 280


>gi|30262250|ref|NP_844627.1| thymidylate synthase [Bacillus anthracis str. Ames]
 gi|47527532|ref|YP_018881.1| thymidylate synthase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185093|ref|YP_028345.1| thymidylate synthase [Bacillus anthracis str. Sterne]
 gi|49477562|ref|YP_036349.1| thymidylate synthase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|65319542|ref|ZP_00392501.1| COG0207: Thymidylate synthase [Bacillus anthracis str. A2012]
 gi|118477668|ref|YP_894819.1| thymidylate synthase [Bacillus thuringiensis str. Al Hakam]
 gi|165872246|ref|ZP_02216884.1| thymidylate synthase [Bacillus anthracis str. A0488]
 gi|167633020|ref|ZP_02391346.1| thymidylate synthase [Bacillus anthracis str. A0442]
 gi|167641064|ref|ZP_02399320.1| thymidylate synthase [Bacillus anthracis str. A0193]
 gi|170686448|ref|ZP_02877669.1| thymidylate synthase [Bacillus anthracis str. A0465]
 gi|170708449|ref|ZP_02898892.1| thymidylate synthase [Bacillus anthracis str. A0389]
 gi|177650834|ref|ZP_02933731.1| thymidylate synthase [Bacillus anthracis str. A0174]
 gi|190567905|ref|ZP_03020816.1| thymidylate synthase [Bacillus anthracis Tsiankovskii-I]
 gi|196033812|ref|ZP_03101223.1| thymidylate synthase [Bacillus cereus W]
 gi|196042313|ref|ZP_03109590.1| thymidylate synthase [Bacillus cereus NVH0597-99]
 gi|196046931|ref|ZP_03114152.1| thymidylate synthase [Bacillus cereus 03BB108]
 gi|218903379|ref|YP_002451213.1| thymidylate synthase [Bacillus cereus AH820]
 gi|225864217|ref|YP_002749595.1| thymidylate synthase [Bacillus cereus 03BB102]
 gi|227814947|ref|YP_002814956.1| thymidylate synthase [Bacillus anthracis str. CDC 684]
 gi|228914838|ref|ZP_04078446.1| Thymidylate synthase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228927305|ref|ZP_04090366.1| Thymidylate synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228945857|ref|ZP_04108201.1| Thymidylate synthase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|229121792|ref|ZP_04251013.1| Thymidylate synthase [Bacillus cereus 95/8201]
 gi|229184465|ref|ZP_04311670.1| Thymidylate synthase [Bacillus cereus BGSC 6E1]
 gi|229604628|ref|YP_002866591.1| thymidylate synthase [Bacillus anthracis str. A0248]
 gi|254684819|ref|ZP_05148679.1| thymidylate synthase [Bacillus anthracis str. CNEVA-9066]
 gi|254722227|ref|ZP_05184015.1| thymidylate synthase [Bacillus anthracis str. A1055]
 gi|254737265|ref|ZP_05194969.1| thymidylate synthase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254743548|ref|ZP_05201233.1| thymidylate synthase [Bacillus anthracis str. Kruger B]
 gi|254751581|ref|ZP_05203618.1| thymidylate synthase [Bacillus anthracis str. Vollum]
 gi|254759096|ref|ZP_05211123.1| thymidylate synthase [Bacillus anthracis str. Australia 94]
 gi|301053768|ref|YP_003791979.1| thymidylate synthase [Bacillus anthracis CI]
 gi|33301703|sp|Q81R23|TYSY_BACAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901310|sp|Q6HJC7|TYSY_BACHK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231689|sp|A0RDL9|TYSY_BACAH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|30256881|gb|AAP26113.1| thymidylate synthase [Bacillus anthracis str. Ames]
 gi|47502680|gb|AAT31356.1| thymidylate synthase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179020|gb|AAT54396.1| thymidylate synthase [Bacillus anthracis str. Sterne]
 gi|49329118|gb|AAT59764.1| thymidylate synthase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|118416893|gb|ABK85312.1| thymidylate synthase [Bacillus thuringiensis str. Al Hakam]
 gi|164712039|gb|EDR17578.1| thymidylate synthase [Bacillus anthracis str. A0488]
 gi|167510962|gb|EDR86352.1| thymidylate synthase [Bacillus anthracis str. A0193]
 gi|167531832|gb|EDR94497.1| thymidylate synthase [Bacillus anthracis str. A0442]
 gi|170126688|gb|EDS95572.1| thymidylate synthase [Bacillus anthracis str. A0389]
 gi|170669524|gb|EDT20266.1| thymidylate synthase [Bacillus anthracis str. A0465]
 gi|172083295|gb|EDT68356.1| thymidylate synthase [Bacillus anthracis str. A0174]
 gi|190560960|gb|EDV14934.1| thymidylate synthase [Bacillus anthracis Tsiankovskii-I]
 gi|195993492|gb|EDX57449.1| thymidylate synthase [Bacillus cereus W]
 gi|196022306|gb|EDX60992.1| thymidylate synthase [Bacillus cereus 03BB108]
 gi|196026858|gb|EDX65488.1| thymidylate synthase [Bacillus cereus NVH0597-99]
 gi|218539044|gb|ACK91442.1| thymidylate synthase [Bacillus cereus AH820]
 gi|225789076|gb|ACO29293.1| thymidylate synthase [Bacillus cereus 03BB102]
 gi|227004156|gb|ACP13899.1| thymidylate synthase [Bacillus anthracis str. CDC 684]
 gi|228599009|gb|EEK56624.1| Thymidylate synthase [Bacillus cereus BGSC 6E1]
 gi|228661708|gb|EEL17327.1| Thymidylate synthase [Bacillus cereus 95/8201]
 gi|228813839|gb|EEM60116.1| Thymidylate synthase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228832381|gb|EEM77957.1| Thymidylate synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228844809|gb|EEM89852.1| Thymidylate synthase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229269036|gb|ACQ50673.1| thymidylate synthase [Bacillus anthracis str. A0248]
 gi|300375937|gb|ADK04841.1| thymidylate synthase [Bacillus cereus biovar anthracis str. CI]
          Length = 318

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ YL +H  +IW                                         
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMIDFGLRSQQDEEFKVQYDEQME 125

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE+++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|259418355|ref|ZP_05742273.1| thymidylate synthase [Silicibacter sp. TrichCH4B]
 gi|259345750|gb|EEW57594.1| thymidylate synthase [Silicibacter sp. TrichCH4B]
          Length = 277

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/277 (54%), Positives = 194/277 (70%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D L+H++  G +  DRTG GT S FG Q R+DL+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYHDALQHILDHGVETTDRTGTGTLSCFGMQQRYDLADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P              Y   
Sbjct: 61  WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGYQWRKFPRLELAEGTLGDEPLYRAG 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQIS +V+ +R  P SRR IV+AWN A +  MALPPCH L+Q  V  GK+  QLYQRS
Sbjct: 121 TVDQISDLVKMIRNSPDSRRLIVTAWNPADVPDMALPPCHSLWQVRVLGGKMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LL  MLA V G++ G F+HT+GD H+Y+NH EQ  LQLSR+P+ L
Sbjct: 181 ADMFLGVPFNIASYALLLQMLAHVTGYEIGTFVHTMGDAHIYSNHMEQVKLQLSRTPKQL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PQ+ I  N+  L  F+YEDF +  Y+P   I A V+V
Sbjct: 241 PQIRIARNVTSLFDFKYEDFEVIGYDPDPTIKAPVAV 277


>gi|296129374|ref|YP_003636624.1| thymidylate synthase [Cellulomonas flavigena DSM 20109]
 gi|296021189|gb|ADG74425.1| thymidylate synthase [Cellulomonas flavigena DSM 20109]
          Length = 278

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/261 (53%), Positives = 184/261 (70%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG+Q+R+DL  GFPL+TTK+V ++ V  EL WFL
Sbjct: 19  YEDLLRLVLATGTPKSDRTGTGTRSVFGHQLRYDLRAGFPLVTTKRVFFRGVAEELFWFL 78

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SN++ L    V IWDEWAD+ GELGP+YGVQWRSWP  DG  +DQ+  ++  LRA+P
Sbjct: 79  RGESNIASLLERNVHIWDEWADEHGELGPVYGVQWRSWPTPDGGHVDQLERLLGELRANP 138

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRRH+VSAWNVA +D+MAL PCH  FQ YV +G+LS Q+YQRS D+FLG+PFN+ASY+L
Sbjct: 139 DSRRHLVSAWNVAELDRMALVPCHAFFQLYVADGRLSLQVYQRSADLFLGVPFNLASYAL 198

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A  +G + G+ + T GD H+Y+NH EQ   QLSR P   P + +      L  + 
Sbjct: 199 LTHMIAQQVGLEVGDLVWTGGDCHIYDNHVEQVREQLSREPYPYPTLEL-REAPSLFDYA 257

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y  H  I A V+V
Sbjct: 258 WDDVEVVGYRHHPTIAAPVAV 278


>gi|158258677|dbj|BAF85309.1| unnamed protein product [Homo sapiens]
          Length = 313

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRS D+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSRDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|301609223|ref|XP_002934168.1| PREDICTED: thymidylate synthase-like [Xenopus (Silurana)
           tropicalis]
          Length = 308

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/282 (46%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 27  QYLDQIKHILEHGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 86

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD                ++G+LGP+YG QWR +         
Sbjct: 87  IKGCTNSKELSAKGVKIWDANGSREFLDKQGFSNREEGDLGPVYGFQWRHFGAEYKDTYT 146

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+ +++++++ +P  RR I+ +WN   I  MALPPCH L QFYV + +LSCQ
Sbjct: 147 DYSGQGVDQLRNVIETIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVIDKELSCQ 206

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E   LQL R
Sbjct: 207 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHTEPLKLQLQR 266

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   + ++  F  +DF +  Y PH +I  +++V
Sbjct: 267 TPRPFPKLKILRKVENIDDFTADDFLIEGYNPHPSIKMEMAV 308


>gi|42781330|ref|NP_978577.1| thymidylate synthase [Bacillus cereus ATCC 10987]
 gi|206978240|ref|ZP_03239119.1| thymidylate synthase [Bacillus cereus H3081.97]
 gi|217959749|ref|YP_002338301.1| thymidylate synthase [Bacillus cereus AH187]
 gi|228907968|ref|ZP_04071819.1| Thymidylate synthase [Bacillus thuringiensis IBL 200]
 gi|228939370|ref|ZP_04101961.1| Thymidylate synthase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228972248|ref|ZP_04132862.1| Thymidylate synthase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228978863|ref|ZP_04139231.1| Thymidylate synthase [Bacillus thuringiensis Bt407]
 gi|62901335|sp|Q738X7|TYSY_BACC1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|42737252|gb|AAS41185.1| thymidylate synthase [Bacillus cereus ATCC 10987]
 gi|206743541|gb|EDZ54969.1| thymidylate synthase [Bacillus cereus H3081.97]
 gi|217064386|gb|ACJ78636.1| thymidylate synthase [Bacillus cereus AH187]
 gi|228780885|gb|EEM29095.1| Thymidylate synthase [Bacillus thuringiensis Bt407]
 gi|228787498|gb|EEM35463.1| Thymidylate synthase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228820330|gb|EEM66364.1| Thymidylate synthase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228851727|gb|EEM96530.1| Thymidylate synthase [Bacillus thuringiensis IBL 200]
 gi|326939942|gb|AEA15838.1| thymidylate synthase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 318

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|290560083|pdb|3EAW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALXQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|52143217|ref|YP_083612.1| thymidylate synthase [Bacillus cereus E33L]
 gi|62901260|sp|Q63BV5|TYSY_BACCZ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|51976686|gb|AAU18236.1| thymidylate synthase [Bacillus cereus E33L]
          Length = 318

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDKQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|227494604|ref|ZP_03924920.1| thymidylate synthase [Actinomyces coleocanis DSM 15436]
 gi|226832338|gb|EEH64721.1| thymidylate synthase [Actinomyces coleocanis DSM 15436]
          Length = 267

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 145/261 (55%), Positives = 190/261 (72%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G+ + DRTG GT S FG Q+R+DLS+GFPL+TTK+VH KSVV EL+WFL
Sbjct: 8   YEDLLREVLETGAVKEDRTGTGTVSVFGRQLRYDLSQGFPLITTKRVHLKSVVGELIWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            G SNV +L  +G+ IW+EWAD++G+LGP+YGVQWRSWP  DG  IDQ++ I++++R++P
Sbjct: 68  NGSSNVKWLQDNGIRIWNEWADENGDLGPVYGVQWRSWPTPDGEHIDQLTQILETVRSNP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNVA +DKMAL PCH  FQ YV +GKLS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 128 DSRRMLVSAWNVAELDKMALAPCHSFFQLYVVDGKLSLQIYQRSADLFLGVPFNIASYAL 187

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A     Q G+ + T GD H+Y+NHFEQ   QLSR     P + +      L  ++
Sbjct: 188 LTHMIAQQCDLQVGDLVWTGGDCHIYSNHFEQVQEQLSRKAYPFPTLEL-RKAESLFDYQ 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            ED  +  Y+ H  I A V+V
Sbjct: 247 IEDVAVHDYQHHPTIKAPVAV 267


>gi|300932648|ref|ZP_07147904.1| thymidylate synthase [Corynebacterium resistens DSM 45100]
          Length = 278

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/261 (59%), Positives = 199/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +++ G+ + DRTG GT S FG Q+R+DL +GFPL+TTKKVH KSVV ELLWFL
Sbjct: 19  YEDLLREILETGAPKGDRTGTGTSSLFGRQIRYDLQQGFPLITTKKVHVKSVVGELLWFL 78

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +GDSNV +L  +G+ IW+EWAD++G+LGP+YGVQWRSWP  DG  +DQI++ +++L+A+P
Sbjct: 79  KGDSNVRWLQENGIRIWNEWADENGDLGPVYGVQWRSWPTPDGRHVDQIAAALETLKANP 138

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASYSL
Sbjct: 139 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYSL 198

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G   GEFI T GD H+Y+NH EQ + QL+R PR  P + +N    D+ S+ 
Sbjct: 199 LTHMFAQQAGLDVGEFIWTGGDCHIYDNHREQVETQLTRDPRPYPTLELN-KAADMFSYD 257

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + D     Y+PH  I A+V+V
Sbjct: 258 FSDIHFAGYDPHPTIKAQVAV 278


>gi|41408967|ref|NP_961803.1| thymidylate synthase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|62901338|sp|Q73VZ2|TYSY_MYCPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|41397326|gb|AAS05186.1| ThyA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 266

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 165/261 (63%), Positives = 199/261 (76%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH KSVV+ELLWFL
Sbjct: 7   YEDLLRLVLDRGTAKSDRTGTGTRSLFGQQLRYDLSAGFPLITTKKVHLKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +LHRHGV+IWDEWA   G+LGPIYGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNVDWLHRHGVTIWDEWASDTGDLGPIYGVQWRSWPTPSGEHIDQISAALDLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGEIPRMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ  LQLSR PR  P++I+  +   +  + 
Sbjct: 187 LTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELILA-HRDSIFDYT 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           Y+D  + +Y+PH AI A V+V
Sbjct: 246 YDDVVVHNYDPHPAIKAPVAV 266


>gi|229133069|ref|ZP_04261908.1| Thymidylate synthase [Bacillus cereus BDRD-ST196]
 gi|228650392|gb|EEL06388.1| Thymidylate synthase [Bacillus cereus BDRD-ST196]
          Length = 318

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLS GFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSNGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229096735|ref|ZP_04227706.1| Thymidylate synthase [Bacillus cereus Rock3-29]
 gi|229115714|ref|ZP_04245119.1| Thymidylate synthase [Bacillus cereus Rock1-3]
 gi|228667856|gb|EEL23293.1| Thymidylate synthase [Bacillus cereus Rock1-3]
 gi|228686941|gb|EEL40848.1| Thymidylate synthase [Bacillus cereus Rock3-29]
          Length = 318

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQMD 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|126321851|ref|XP_001368094.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase)
           [Monodelphis domestica]
          Length = 335

 Score =  367 bits (943), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/283 (46%), Positives = 177/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL  + H++++GS + DRTG GT S FG Q R++L   FPLLTTK+V WK V+ ELLW
Sbjct: 53  KQYLQQIEHILQYGSKKNDRTGTGTMSVFGMQARYNLRGEFPLLTTKRVFWKGVLEELLW 112

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+RG +N   L   GV IWD                ++G+LGP+YG QWR +        
Sbjct: 113 FIRGCTNGKELSAKGVKIWDANGSREFLDNLGLTQREEGDLGPVYGFQWRHFGAEYKEMN 172

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++  ++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSC
Sbjct: 173 TDYSGQGVDQLQKVIDKIKTNPDDRRLIMCAWNPKDLPLMALPPCHALCQFYVANGELSC 232

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFNIASYSLLT M+A + G + G+F+H+LGD H+Y NH E   +QL 
Sbjct: 233 QLYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFVHSLGDAHVYMNHIEPLKIQLQ 292

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P++ I   +  +  F+ EDF +  Y PH  I   ++V
Sbjct: 293 REPRPFPKLKILRKVESIDDFKAEDFLIEGYNPHPTIKMDMAV 335


>gi|229102840|ref|ZP_04233535.1| Thymidylate synthase [Bacillus cereus Rock3-28]
 gi|228680579|gb|EEL34761.1| Thymidylate synthase [Bacillus cereus Rock3-28]
          Length = 318

 Score =  367 bits (942), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVRYDEQMD 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|300118030|ref|ZP_07055778.1| thymidylate synthase [Bacillus cereus SJ1]
 gi|298724341|gb|EFI65035.1| thymidylate synthase [Bacillus cereus SJ1]
          Length = 318

 Score =  367 bits (942), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWIESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|228991229|ref|ZP_04151187.1| Thymidylate synthase [Bacillus pseudomycoides DSM 12442]
 gi|228768453|gb|EEM17058.1| Thymidylate synthase [Bacillus pseudomycoides DSM 12442]
          Length = 318

 Score =  367 bits (942), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL ++  +IW+EWA                                     
Sbjct: 66  FMKGDTNIRYLLQNNNNIWNEWAFKSWVESDAYEGPDMTDFGLRSQQDEEFKKQYDEQMD 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        ++ G LG +YG QWR+W    G  IDQ+  +++ ++  P SRR +VS
Sbjct: 126 LFKKNVLEDDDFANQYGYLGDVYGKQWRAWKTTAGETIDQLKDVIEMIKKTPDSRRLLVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P + +NP++  +  F  +D TL  
Sbjct: 246 CGLEAGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPTLKLNPDVKSVFDFEMDDLTLEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|260783288|ref|XP_002586708.1| hypothetical protein BRAFLDRAFT_77468 [Branchiostoma floridae]
 gi|229271831|gb|EEN42719.1| hypothetical protein BRAFLDRAFT_77468 [Branchiostoma floridae]
          Length = 294

 Score =  367 bits (942), Expect = e-100,   Method: Composition-based stats.
 Identities = 135/283 (47%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLDL+RH++  G  + DRTG GT S FG Q R+ L   FPLLTTK+V W+ V  ELLW
Sbjct: 12  YQYLDLVRHILDCGQRKDDRTGTGTLSVFGAQCRYSLRGQFPLLTTKRVFWRGVAEELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG +N   L    V IWD    +D            G+LGP+YG QWR +        
Sbjct: 72  FVRGCTNGKELSDKKVHIWDANGSRDFLDKRGLSHYEEGDLGPVYGFQWRHFGAEYKDRY 131

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++ +++ DP +RR I+SAWN   + KMALPPCH   QFYV NG+LSC
Sbjct: 132 TDYTGQGVDQLAQVIHTIKTDPDNRRIIMSAWNPPDLPKMALPPCHAFVQFYVCNGELSC 191

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD  LG+PFNIASYSLLT M+A + G + G+F+HTLGD H+Y NH +    QL 
Sbjct: 192 QLYQRSGDTGLGVPFNIASYSLLTYMIAHITGLKPGDFVHTLGDAHVYVNHVDALKEQLK 251

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P + I   + ++  F+ EDF +  Y+PH  I  +++V
Sbjct: 252 REPRPFPTLNIKRQVENIDDFKMEDFEIVGYKPHPKISMEMAV 294


>gi|119713736|gb|ABL97785.1| thymidylate synthase [uncultured marine bacterium HF10_29C11]
          Length = 257

 Score =  367 bits (942), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 148/257 (57%), Positives = 196/257 (76%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           +RH++  G ++ DRTG GT S FGYQMRFDLS+GFP++TTKK+H +S+VHELLWFL+GD+
Sbjct: 1   MRHILDNGVEKGDRTGTGTLSVFGYQMRFDLSEGFPMVTTKKLHLRSIVHELLWFLKGDT 60

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           NV YL  +GV IW+EWAD++G+LGP+YG QWR+W   DG +IDQ+   ++ ++ +P SRR
Sbjct: 61  NVKYLQENGVRIWNEWADENGDLGPVYGKQWRNWEAKDGRIIDQVERAIEQIKNNPNSRR 120

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            IVSAWNV  +D+MAL PCH  FQF+V +GKL+CQLYQRS DVFLG+PFNIASY+LLT M
Sbjct: 121 IIVSAWNVGELDEMALMPCHAFFQFHVADGKLNCQLYQRSADVFLGVPFNIASYALLTHM 180

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A V G + G F+HTLGD HLY NH +QA  Q+SR P  LP + ++ +I D+ +F +E  
Sbjct: 181 MAQVCGLEAGTFVHTLGDAHLYMNHLDQAREQISREPLPLPVLKLDQSIADIDAFTFEHI 240

Query: 248 TLRSYEPHAAILAKVSV 264
            +  YE H  I A +SV
Sbjct: 241 EIIGYEHHPHISAPISV 257


>gi|229821345|ref|YP_002882871.1| thymidylate synthase [Beutenbergia cavernae DSM 12333]
 gi|229567258|gb|ACQ81109.1| thymidylate synthase [Beutenbergia cavernae DSM 12333]
          Length = 275

 Score =  367 bits (942), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 157/262 (59%), Positives = 192/262 (73%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLL  V+  G+ + DRTG GTRS FG Q+R+DL   FPL+TTK+VH KS+VHELLWF
Sbjct: 15  QYEDLLAEVLADGAHKSDRTGTGTRSVFGRQLRYDLRHSFPLVTTKRVHVKSLVHELLWF 74

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRG+SNV YL  +GV IW+EWAD DGELGP+YGVQWRSWP  DG  IDQI+ +V++LR D
Sbjct: 75  LRGESNVRYLQENGVRIWNEWADDDGELGPVYGVQWRSWPTPDGGHIDQIARVVENLRTD 134

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRRHIVSAWNVA +D MAL PCH LFQFYV NG+LSCQLYQRS D+FLG+PFN+ASYS
Sbjct: 135 PDSRRHIVSAWNVAELDDMALAPCHALFQFYVANGELSCQLYQRSADLFLGVPFNVASYS 194

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A   G   G+F+ T GD H+Y+NH EQ   QL+R P   P + +      +  +
Sbjct: 195 LLTHMVAQQTGLAVGDFVWTGGDCHIYDNHTEQVREQLARDPYPFPTLAL-RQAPSIFDY 253

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            Y D  +  Y+ HA I A ++V
Sbjct: 254 AYADVEVVGYQHHAPIAAPIAV 275


>gi|13096294|pdb|1HVY|A Chain A, Human Thymidylate Synthase Complexed With Dump And
           Raltitrexed, An Antifolate Drug, Is In The Closed
           Conformation
 gi|13096295|pdb|1HVY|B Chain B, Human Thymidylate Synthase Complexed With Dump And
           Raltitrexed, An Antifolate Drug, Is In The Closed
           Conformation
 gi|13096296|pdb|1HVY|C Chain C, Human Thymidylate Synthase Complexed With Dump And
           Raltitrexed, An Antifolate Drug, Is In The Closed
           Conformation
 gi|13096297|pdb|1HVY|D Chain D, Human Thymidylate Synthase Complexed With Dump And
           Raltitrexed, An Antifolate Drug, Is In The Closed
           Conformation
          Length = 288

 Score =  367 bits (942), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 7   QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 66

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 67  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 126

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 127 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 186

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 187 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 246

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 247 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 288


>gi|262280883|ref|ZP_06058666.1| thymidylate synthase [Acinetobacter calcoaceticus RUH2202]
 gi|262257783|gb|EEY76518.1| thymidylate synthase [Acinetobacter calcoaceticus RUH2202]
          Length = 280

 Score =  367 bits (942), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 157/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + VSIWDEWA           + ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR I+S WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYVNHFEQAQLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP + DL  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEVKDLFDFKFEDVEIVGYESHPAIKAPVAV 280


>gi|300781716|ref|ZP_07091570.1| thymidylate synthase [Corynebacterium genitalium ATCC 33030]
 gi|300533423|gb|EFK54484.1| thymidylate synthase [Corynebacterium genitalium ATCC 33030]
          Length = 274

 Score =  367 bits (942), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 152/261 (58%), Positives = 189/261 (72%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G  + DRTG GT S FG Q+R+DLS  FPLLTTKKV++K VV ELLWFL
Sbjct: 15  YEDLLREILDTGVAKEDRTGTGTVSVFGKQLRYDLSDSFPLLTTKKVYFKGVVGELLWFL 74

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +GDSNV +L  +G+ IW+EWA+ +GELGP+YGVQWRSWP  DG  IDQI + +  L+ DP
Sbjct: 75  KGDSNVKWLQDNGIRIWNEWANDNGELGPVYGVQWRSWPTPDGQHIDQIQNALDLLKQDP 134

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNV+ +DKMAL PCH LFQ YV +GKLS Q+YQRS D+FLG+PFNIASYSL
Sbjct: 135 ESRRNVVSAWNVSELDKMALMPCHLLFQLYVADGKLSMQVYQRSADMFLGVPFNIASYSL 194

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GE I T GD H+YN+H EQ   QLSR PR  PQ+ +      +  + 
Sbjct: 195 LTHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSREPRPYPQLELA-KAESIFDYG 253

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  Y+PH  I AKVSV
Sbjct: 254 FDDIAVTGYDPHPTIAAKVSV 274


>gi|226500582|ref|NP_001152378.1| LOC100286018 [Zea mays]
 gi|195655695|gb|ACG47315.1| bifunctional dihydrofolate reductase-thymidylate synthase [Zea
           mays]
          Length = 523

 Score =  367 bits (942), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 132/283 (46%), Positives = 180/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L+  +I+FG+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW
Sbjct: 241 YQYLNLVEDIIRFGAQKNDRTGTGTLSKFGCQMRFNLRKIFPLLTTKRVFWRGVVEELLW 300

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F+ G +N   L   G+ IWD                ++G+LGP+YG QWR +        
Sbjct: 301 FISGSTNAKVLQEKGIHIWDGNASREYLDRIGLAHREEGDLGPVYGFQWRHFGAEYTDMH 360

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN + + KMALPPCH   QFYV+NG+LSC
Sbjct: 361 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVENGELSC 420

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     G+F+H +GD H+Y NH    + Q+ 
Sbjct: 421 QMYQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRNHVRALEEQIQ 480

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP+  D+ SF   DF L  Y+PH  +  K++V
Sbjct: 481 KMPKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKLEMKMAV 523


>gi|228985327|ref|ZP_04145488.1| Thymidylate synthase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229155822|ref|ZP_04283925.1| Thymidylate synthase [Bacillus cereus ATCC 4342]
 gi|228627666|gb|EEK84390.1| Thymidylate synthase [Bacillus cereus ATCC 4342]
 gi|228774423|gb|EEM22828.1| Thymidylate synthase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 318

 Score =  366 bits (941), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPELTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229167077|ref|ZP_04294821.1| Thymidylate synthase [Bacillus cereus AH621]
 gi|228616430|gb|EEK73511.1| Thymidylate synthase [Bacillus cereus AH621]
          Length = 318

 Score =  366 bits (941), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ YL +H  +IW                                         
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKKQYDEQME 125

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE++ K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSTKFGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR+ P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRSFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|228920949|ref|ZP_04084287.1| Thymidylate synthase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228838738|gb|EEM84041.1| Thymidylate synthase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 318

 Score =  366 bits (941), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ YL +H  +IW                                         
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE+++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
              + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CDLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229172934|ref|ZP_04300487.1| Thymidylate synthase [Bacillus cereus MM3]
 gi|228610557|gb|EEK67826.1| Thymidylate synthase [Bacillus cereus MM3]
          Length = 318

 Score =  366 bits (941), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 199/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKNWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDNDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A+ 
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIANE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQIEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|290560085|pdb|3ED7|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 295

 Score =  366 bits (941), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 14  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 74  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 133

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 134 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 193

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 194 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 253

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 254 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 295


>gi|324326272|gb|ADY21532.1| thymidylate synthase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 318

 Score =  366 bits (941), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKIQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTVGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|229029956|ref|ZP_04186024.1| Thymidylate synthase [Bacillus cereus AH1271]
 gi|228731383|gb|EEL82297.1| Thymidylate synthase [Bacillus cereus AH1271]
          Length = 318

 Score =  366 bits (941), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 199/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKIPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A+ 
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIANE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|299771659|ref|YP_003733685.1| thymidylate synthase [Acinetobacter sp. DR1]
 gi|298701747|gb|ADI92312.1| thymidylate synthase [Acinetobacter sp. DR1]
          Length = 280

 Score =  366 bits (941), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 158/280 (56%), Positives = 197/280 (70%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+H++  G D+ DRTG GTRS FG+QMRFDLSKGFPLLTTKKVH++S+V ELL
Sbjct: 1   MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DY 104
           WFL+GD+NV YL  + VSIWDEWA           + ELGP+YG QWR++         Y
Sbjct: 61  WFLKGDTNVQYLKDNKVSIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGSY 120

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           + +  DQI  ++  ++ +P SRR I+S WN     ++ALPPCH LFQF+V + KLSCQLY
Sbjct: 121 NQDGFDQIKWLINEIKTNPNSRRLIISGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V G   G+F+ T GD HLY NHFEQA LQL+R P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L Q+ +NP I DL  F++ED  +  YE H AI A V+V
Sbjct: 241 LPLCQLKLNPEIKDLFDFKFEDVEIVGYESHPAIKAPVAV 280


>gi|311740900|ref|ZP_07714727.1| thymidylate synthase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304420|gb|EFQ80496.1| thymidylate synthase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 275

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 148/261 (56%), Positives = 192/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++ +V+ ELLWFL
Sbjct: 16  YEDLLRRVLDKGTPKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHAVLGELLWFL 75

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G+SN+ +L  + V IW+EWAD +GELGP+YGVQWRSWP  DG  IDQI   + +L+ +P
Sbjct: 76  KGESNIKFLQDNKVRIWNEWADDNGELGPVYGVQWRSWPTPDGQHIDQIQQALDTLKNNP 135

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNVA +DKMAL PCH LFQ YV +G LS Q+YQRS D+FLG+PFNIASY+ 
Sbjct: 136 DSRRNLVSAWNVAELDKMALMPCHLLFQLYVADGTLSMQVYQRSADMFLGVPFNIASYAA 195

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GE I T GD H+YN+H EQ   QLSR PR  PQ+ ++    D+ S+ 
Sbjct: 196 LTHMFAQQAGLKVGELIWTGGDCHIYNDHVEQVKEQLSREPRPYPQLNLH-KAEDMFSYD 254

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + DF +  Y+PH  I A+VSV
Sbjct: 255 FADFEIEGYDPHPTIKAQVSV 275


>gi|329848571|ref|ZP_08263599.1| thymidylate synthase [Asticcacaulis biprosthecum C19]
 gi|328843634|gb|EGF93203.1| thymidylate synthase [Asticcacaulis biprosthecum C19]
          Length = 288

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 160/263 (60%), Positives = 203/263 (77%), Gaps = 1/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+LLR  ++ G  R DRTG GT   FG Q+RFDLS+GFPLLTTKKVH+KSV  ELLW
Sbjct: 27  YQYLNLLRDCLENGVRRDDRTGTGTYGLFGRQIRFDLSQGFPLLTTKKVHFKSVAVELLW 86

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGD+NV YL  HGV+IWDEWAD DG LGP+YG QWRSW   DG VIDQ++ +V++L+ 
Sbjct: 87  FLRGDTNVKYLQDHGVTIWDEWADDDGNLGPVYGKQWRSWAAPDGRVIDQMAQLVENLKT 146

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRRH++SAWN A ++ MALPPCHCLFQF+V +G+LSCQLYQRS D+FLG+PFNIASY
Sbjct: 147 NPNSRRHVISAWNPAEVEDMALPPCHCLFQFFVADGRLSCQLYQRSADIFLGVPFNIASY 206

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A  +G + G+F+H+ GDVHLY+NH EQA  Q+ R+P   P + + P   DL  
Sbjct: 207 ALLTHMVAQAVGLKPGDFVHSFGDVHLYSNHIEQAKTQMERTPFAFPVLELAPK-TDLFG 265

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           F Y D T+ +Y+ H A+ A V+V
Sbjct: 266 FDYADLTIANYQSHGALKAPVAV 288


>gi|221124392|ref|XP_002161436.1| PREDICTED: similar to Thymidylate synthase [Hydra magnipapillata]
          Length = 265

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 8/265 (3%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           +RHV   G  + DRTG GT+S FGYQMRFDL++GFPL+TTKKVH +S++ ELLWFL G S
Sbjct: 1   MRHVHTTGVFKSDRTGTGTKSVFGYQMRFDLNEGFPLVTTKKVHLRSIIQELLWFLTGSS 60

Query: 68  NVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126
           N ++L   GV+IWDEWA+ + G+LGP+YGVQWRSWP  DG  IDQI+ ++++L+++P SR
Sbjct: 61  NNNWLKERGVTIWDEWANPETGDLGPVYGVQWRSWPTPDGGHIDQIADVIKTLKSNPDSR 120

Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLGIPFNIA 179
           R IVSAWNVA + KMAL PCH  FQFYV         G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 121 RIIVSAWNVAELSKMALMPCHAFFQFYVAPATEPGGKGRLSCQLYQRSADIFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LLT M+A       G+FI T GD H+Y+NH EQ +LQLSR+P   P + I      +
Sbjct: 181 SYALLTHMVAQQCDLDVGDFIWTGGDCHIYSNHTEQVELQLSRAPMAYPTLNIKRKPESI 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             +++EDF +  YE H AI A V+V
Sbjct: 241 FDYQFEDFEVLGYECHPAIKAPVAV 265


>gi|157073887|ref|NP_001096659.1| thymidylate synthase [Xenopus laevis]
 gi|120538084|gb|AAI29728.1| Ts protein [Xenopus laevis]
          Length = 309

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 129/282 (45%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD ++++++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 28  QYLDQIKYILEHGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 87

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD                ++G+LGP+YG QWR +         
Sbjct: 88  VKGCTNSKELSAKGVKIWDANGSREFLDKQGFSTREEGDLGPVYGFQWRHFGAEYKDTHT 147

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ +WN   I  MALPPCH L QFYV + +LSCQ
Sbjct: 148 DYSGQGVDQLQHVIDTIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVVDKELSCQ 207

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E   +QL R
Sbjct: 208 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHMEPLKIQLQR 267

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           SPR  P++ I   + ++  F  +DF +  Y+PH  I  +++V
Sbjct: 268 SPRPFPKLKILRQVENIDDFTADDFLIEGYDPHPPIKMEMAV 309


>gi|268315914|ref|YP_003289633.1| thymidylate synthase [Rhodothermus marinus DSM 4252]
 gi|262333448|gb|ACY47245.1| thymidylate synthase [Rhodothermus marinus DSM 4252]
          Length = 283

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 160/283 (56%), Positives = 194/283 (68%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY + LR++++ G+ R DRTG GT S FGYQMRFDL +GFPL+TTKK+H KSVVHELL
Sbjct: 1   MRQYHEFLRYILERGTRREDRTGTGTISVFGYQMRFDLQEGFPLVTTKKIHIKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YLH HGV+IWDEWA ++GELGPIYG QWR W   DG  IDQI+ +V+S+R
Sbjct: 61  WFLRGDTNLRYLHEHGVTIWDEWATEEGELGPIYGKQWRRWLAPDGREIDQIAEVVRSIR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNG------KLSC 161
             P+SRRH+VSAWNVA +               MAL PCH LFQFYV         +LSC
Sbjct: 121 ERPWSRRHVVSAWNVADLPDERLSPQENVRRGRMALAPCHVLFQFYVAERPEWERPRLSC 180

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D FLG+PFNIASYSLLT M+A       GEFI T GD H+Y NH EQ +  LS
Sbjct: 181 QLYQRSADAFLGVPFNIASYSLLTHMIAQQTDLDVGEFIWTGGDCHIYLNHLEQVEELLS 240

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P  LP+++I      +  +RYEDF   +Y  H  I A ++V
Sbjct: 241 REPYPLPKLVIKRRPPSIFDYRYEDFEFVNYRHHPPIKAPIAV 283


>gi|118403890|ref|NP_001072852.1| thymidylate synthase [Xenopus (Silurana) tropicalis]
 gi|114107689|gb|AAI22925.1| thymidylate synthetase [Xenopus (Silurana) tropicalis]
          Length = 308

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 130/282 (46%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 27  QYLDQIKHILERGHRKEDRTGTGTVSVFGMQARYSLRDQFPLLTTKRVFWKGVLEELLWF 86

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD                ++G+LGP+YG QWR +         
Sbjct: 87  IKGCTNSKELSAKGVKIWDANGSREFLDKQGFSNREEGDLGPVYGFQWRHFGAEYKDTYT 146

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+ +++++++ +P  RR I+ +WN   I  MALPPCH L QFYV + +LSCQ
Sbjct: 147 DYSGQGVDQLRNVIETIKNNPDDRRIIMCSWNPKDISLMALPPCHTLCQFYVIDKELSCQ 206

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH E   LQL R
Sbjct: 207 LYQRSGDMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYLNHTEPLKLQLQR 266

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   + ++  F  +DF +  Y PH +I  +++V
Sbjct: 267 TPRPFPKLKILRKVENIDDFTADDFLIEGYNPHPSIKMEMAV 308


>gi|222095834|ref|YP_002529891.1| thymidylate synthase [Bacillus cereus Q1]
 gi|221239892|gb|ACM12602.1| thymidylate synthase [Bacillus cereus Q1]
          Length = 318

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP +  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPGVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|294340056|emb|CAZ88424.1| thymidylate synthase (TS) (TSase) [Thiomonas sp. 3As]
          Length = 279

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 159/272 (58%), Positives = 192/272 (70%), Gaps = 11/272 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+RHV   G D+ DRTG GTRS FG+QMRFDLS GFPL+TTK+VH+KS+ +ELLWFL
Sbjct: 8   YEDLMRHVFTHGQDKTDRTGTGTRSVFGHQMRFDLSAGFPLITTKRVHFKSIAYELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           RG+SNV +L  HGV+IWDEWA +DGELGP+YGVQWRSWP    D     IDQIS +++ L
Sbjct: 68  RGESNVRWLQEHGVTIWDEWAREDGELGPVYGVQWRSWPAPTADDPHRSIDQISEVLRQL 127

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-------GKLSCQLYQRSGDVFL 172
           R  P SRR IVSAWNV  I +MALPPCH  FQFYV         G+LSCQLYQRS D+FL
Sbjct: 128 RTQPDSRRIIVSAWNVGQIAEMALPPCHAFFQFYVAPPRQPGGPGRLSCQLYQRSADIFL 187

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G+PFNIASY+LLT+M+A       G+F+ T GD HLY+NHF Q   QLSR+P   P +  
Sbjct: 188 GVPFNIASYALLTLMIAQQTDLLPGDFVWTGGDCHLYSNHFAQVQEQLSRAPYPYPTLEF 247

Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                 L  + ++DF L  Y+ H AI A V+V
Sbjct: 248 ARKPESLFDYTFDDFVLSHYQHHPAIKAPVAV 279


>gi|306823471|ref|ZP_07456846.1| thymidylate synthase [Bifidobacterium dentium ATCC 27679]
 gi|309802582|ref|ZP_07696686.1| thymidylate synthase [Bifidobacterium dentium JCVIHMP022]
 gi|304553178|gb|EFM41090.1| thymidylate synthase [Bifidobacterium dentium ATCC 27679]
 gi|308220646|gb|EFO76954.1| thymidylate synthase [Bifidobacterium dentium JCVIHMP022]
          Length = 290

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 143/265 (53%), Positives = 185/265 (69%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG Q+RFDL  GFPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRRILTEGTLKSDRTGTGTISLFGQQIRFDLKDGFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L  H V IWDEWAD++G+LGP+YG QWRSWP    D     IDQI++++  +
Sbjct: 87  KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQITNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMVVSAWNPAEVEHMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P++ I+     L
Sbjct: 207 SYSLLTLMMAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLGREPYPYPKIRIH-EAESL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y  H  I A V+V
Sbjct: 266 FDYDYSDFEIVDYRHHPTIKAPVAV 290


>gi|149635254|ref|XP_001508361.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase)
           [Ornithorhynchus anatinus]
          Length = 313

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 136/282 (48%), Positives = 180/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  +RH+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQVRHILRSGCKKEDRTGTGTVSVFGLQARYSLRDQFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSAKGVRIWDANGSRDFLDKHGFTSREEGDLGPVYGFQWRHFGAEYKEMNT 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++A+P  RR I+ AWN   I  MALPPCH L QFYV NG+LSCQ
Sbjct: 152 DYAGQGVDQLQKVIDTIKANPDDRRIIMCAWNPKDIPLMALPPCHALCQFYVLNGELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASYSLLT M+A + G + G+F+HTLGD H+Y NH E  ++QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLEVQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH AI  +++V
Sbjct: 272 EPRPFPRLKILRQVETIDDFKAEDFQIEDYNPHPAIKMEMAV 313


>gi|323490213|ref|ZP_08095431.1| thymidylate synthase [Planococcus donghaensis MPA1U2]
 gi|323396142|gb|EGA88970.1| thymidylate synthase [Planococcus donghaensis MPA1U2]
          Length = 314

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 144/314 (45%), Positives = 190/314 (60%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL  H++  G+ + DRTG GT S FG+QMRFDL++GFPL+TTKK  ++ +V ELL
Sbjct: 1   MKQYLDLCEHILHNGAKKEDRTGTGTLSVFGHQMRFDLTQGFPLMTTKKTAFRLIVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WF++GD+NV  L +    IWDEWA                                    
Sbjct: 61  WFIKGDTNVRALLQDNNHIWDEWAFAQWVESDEYTGPDMTDFGRRAQKDPEFAELYKQQM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K G+LGP+YG QWRSW   +G  IDQ+ ++++S++ +P SRRH+V
Sbjct: 121 QIFQQKVMDNPVFASKYGDLGPVYGKQWRSWATTEGGTIDQLKNVIESIKKNPDSRRHLV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           +AWN   ID MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A 
Sbjct: 181 TAWNPEFIDDMALPPCHIMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
               + G+F+HT GD HLY+NH  Q   QL+R P+ LP + IN  +  +      D T+ 
Sbjct: 241 ECKLEVGDFVHTTGDTHLYSNHLSQVQEQLTREPKPLPTLHINEEVESIFDLTLADITIE 300

Query: 251 SYEPHAAILAKVSV 264
            Y+PH  I A V+V
Sbjct: 301 GYDPHPRIKAPVAV 314


>gi|229074920|ref|ZP_04207929.1| Thymidylate synthase [Bacillus cereus Rock4-18]
 gi|228708257|gb|EEL60421.1| Thymidylate synthase [Bacillus cereus Rock4-18]
          Length = 318

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWIESDEYTGPDMTDFGLRSQQDEEFKVQYDEQMD 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEIEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|19552071|ref|NP_600073.1| thymidylate synthase [Corynebacterium glutamicum ATCC 13032]
 gi|62389734|ref|YP_225136.1| thymidylate synthase [Corynebacterium glutamicum ATCC 13032]
 gi|145295015|ref|YP_001137836.1| thymidylate synthase [Corynebacterium glutamicum R]
 gi|25091465|sp|Q8NS38|TYSY_CORGL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172044395|sp|A4QCI7|TYSY_CORGB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|21323610|dbj|BAB98237.1| Thymidylate synthase [Corynebacterium glutamicum ATCC 13032]
 gi|41325069|emb|CAF19550.1| PROBABLE THYMIDYLATE SYNTHASE [Corynebacterium glutamicum ATCC
           13032]
 gi|140844935|dbj|BAF53934.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 266

 Score =  366 bits (939), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR + + GS + DRTG GT S FG Q+RFDL++GFPLLTTKKVH+ SVV ELLWFL
Sbjct: 7   YEDLLRKIAEEGSHKDDRTGTGTTSLFGQQIRFDLNEGFPLLTTKKVHFHSVVGELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +GDSNV +L  + + IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQIS  +++LR +P
Sbjct: 67  QGDSNVKWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISGALETLRNNP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GEFI T GD H+Y+NH EQ   QLSR  R  P + +N     +  + 
Sbjct: 187 LTHMFAQQAGLEVGEFIWTGGDCHIYDNHKEQVAEQLSREARPYPTLELN-KAASMFEYS 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D T+  Y+PH  I  KV+V
Sbjct: 246 FDDITVSGYDPHPLIRGKVAV 266


>gi|229011512|ref|ZP_04168700.1| Thymidylate synthase [Bacillus mycoides DSM 2048]
 gi|228749803|gb|EEL99640.1| Thymidylate synthase [Bacillus mycoides DSM 2048]
          Length = 318

 Score =  366 bits (939), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVEGDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R P   P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPHPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|12847560|dbj|BAB27620.1| unnamed protein product [Mus musculus]
          Length = 307

 Score =  366 bits (939), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 131/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 26  QYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 86  IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 146 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 206 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR   ++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 266 EPRPFQKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 307


>gi|296135862|ref|YP_003643104.1| thymidylate synthase [Thiomonas intermedia K12]
 gi|295795984|gb|ADG30774.1| thymidylate synthase [Thiomonas intermedia K12]
          Length = 279

 Score =  366 bits (939), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 159/272 (58%), Positives = 192/272 (70%), Gaps = 11/272 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+RHV   G D+ DRTG GTRS FG+QMRFDLS GFPL+TTK+VH+KS+ +ELLWFL
Sbjct: 8   YEDLMRHVFTHGQDKTDRTGTGTRSVFGHQMRFDLSAGFPLITTKRVHFKSIAYELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           RG+SNV +L  HGV+IWDEWA +DGELGP+YGVQWRSWP    D     IDQIS +++ L
Sbjct: 68  RGESNVRWLQEHGVTIWDEWAREDGELGPVYGVQWRSWPAPTADDPHRSIDQISEVLRQL 127

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-------GKLSCQLYQRSGDVFL 172
           R  P SRR IVSAWNV  I +MALPPCH  FQFYV         G+LSCQLYQRS D+FL
Sbjct: 128 RTQPDSRRIIVSAWNVGQIAEMALPPCHAFFQFYVAPPRQPGEPGRLSCQLYQRSADIFL 187

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G+PFNIASY+LLT+M+A       G+F+ T GD HLY+NHF Q   QLSR+P   P +  
Sbjct: 188 GVPFNIASYALLTLMIAQQTDLLPGDFVWTGGDCHLYSNHFAQVQEQLSRAPYPYPTLEF 247

Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                 L  + ++DF L  Y+ H AI A V+V
Sbjct: 248 ARKPESLFDYTFDDFVLSHYQHHPAIKAPVAV 279


>gi|313140945|ref|ZP_07803138.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133455|gb|EFR51072.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171]
          Length = 260

 Score =  366 bits (939), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 146/261 (55%), Positives = 186/261 (71%), Gaps = 5/261 (1%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           +R ++  G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL+G S
Sbjct: 1   MRRIMLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFLKGSS 60

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADP 123
           NV +L  H V IWD+WAD++G+LGP+YGVQWRSWP          IDQI +++  +R  P
Sbjct: 61  NVRWLQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTSEDPNRTIDQIGNVLDLIRNHP 120

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIASYSL
Sbjct: 121 DSRRMVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIASYSL 180

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LTMM+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   P++ I      L  ++
Sbjct: 181 LTMMIAQQTGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEI-RKADSLFDYQ 239

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YEDFT+  Y  H  I A V+V
Sbjct: 240 YEDFTIVDYRHHPTIKAPVAV 260


>gi|323448689|gb|EGB04584.1| hypothetical protein AURANDRAFT_38942 [Aureococcus anophagefferens]
          Length = 510

 Score =  366 bits (939), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 129/284 (45%), Positives = 178/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
            QYLDL+  ++  G  R DRTG GT S FG +M F L    FPLLTTK+V W+ V  EL+
Sbjct: 227 KQYLDLIAEILDRGVRRGDRTGTGTISIFGARMSFSLRNDRFPLLTTKRVFWRGVAEELV 286

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WF+ G +N   L   G+ IWD                ++ +LGP+YG QWR +       
Sbjct: 287 WFVSGSTNGKLLADKGIHIWDGNGSREFLDRRGLGHREEMDLGPVYGFQWRHFGAKYVDM 346

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+++ V++++ DP SRR ++SAWN A +D+MALPPCH   QFYV NG+LS
Sbjct: 347 HKDYAGEGVDQLAACVETIKQDPNSRRIVLSAWNPADLDEMALPPCHMFCQFYVANGELS 406

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFNIASY+LLT M+A   G + G+F+H +GD H+Y+NH +   +QL
Sbjct: 407 CQMYQRSADMGLGVPFNIASYALLTRMVAQATGLKPGDFVHVIGDAHVYSNHVDALKVQL 466

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P + INP    +  F + DFT+  Y+P+  I  K++V
Sbjct: 467 QREPRPFPTLTINPAKTGIDDFEFADFTVEGYKPYPKIDMKMAV 510


>gi|120555343|ref|YP_959694.1| thymidylate synthase [Marinobacter aquaeolei VT8]
 gi|166231710|sp|A1U3D8|TYSY_MARAV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|120325192|gb|ABM19507.1| thymidylate synthase [Marinobacter aquaeolei VT8]
          Length = 279

 Score =  366 bits (939), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 149/279 (53%), Positives = 189/279 (67%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ V+  G D+ DRTGVGTRS FG QMRF+L  GFPL+TTKKVH +S+++ELL
Sbjct: 1   MKAYLDLMQDVVDNGFDKGDRTGVGTRSVFGRQMRFNLQDGFPLVTTKKVHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G ++ ++L    VSIW+EWA ++G+LGPIYG QWRSW  +DG VIDQIS +++ +R
Sbjct: 61  WFLKGSTDNTWLAERKVSIWNEWALENGDLGPIYGKQWRSWQCHDGRVIDQISEVIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWN A +               MAL PCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 TKPNSRRLIVSAWNPAELPDESISPQDNVREGRMALAPCHCLFQFYVADGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLSRSPR 225
            D+FLG+PFNIASY+LLT M+A       GEF+HT GD HLY NH        QL R PR
Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYRNHLTDDIVFEQLRREPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP+++I      +  +  EDF    Y+P   I A +++
Sbjct: 241 ALPKLVIKRKPESIFGYELEDFEFEGYDPSPVIKAPIAI 279


>gi|218897205|ref|YP_002445616.1| thymidylate synthase [Bacillus cereus G9842]
 gi|218544363|gb|ACK96757.1| thymidylate synthase [Bacillus cereus G9842]
          Length = 318

 Score =  365 bits (938), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 148/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKGWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYALLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +N ++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|25027475|ref|NP_737529.1| thymidylate synthase [Corynebacterium efficiens YS-314]
 gi|259507119|ref|ZP_05750019.1| thymidylate synthase [Corynebacterium efficiens YS-314]
 gi|29337062|sp|Q8FR47|TYSY_COREF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|23492757|dbj|BAC17729.1| putative thymidylate synthase [Corynebacterium efficiens YS-314]
 gi|259165397|gb|EEW49951.1| thymidylate synthase [Corynebacterium efficiens YS-314]
          Length = 267

 Score =  365 bits (938), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 155/261 (59%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR +   G+ + DRTG GT S FG Q+R++L +GFPLLTTKKVH+ SVV ELLWFL
Sbjct: 8   YEDLLRTIRDEGAHKDDRTGTGTTSLFGQQIRYNLQEGFPLLTTKKVHFHSVVGELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV +L  + + IW+EWAD+DGELGP+YGVQWRSWP  DG  IDQIS  ++ L+ +P
Sbjct: 68  RGDSNVRWLQDNNIRIWNEWADEDGELGPVYGVQWRSWPTPDGRHIDQISRALEMLKNNP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV+ ++ MALPPCH LFQ YV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 128 DSRRNIVSAWNVSELENMALPPCHLLFQLYVADGKLSCQLYQRSADMFLGVPFNIASYAL 187

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A     + GEFI T GD H+Y+NH EQ D QLSR+ R  P + +N     L  + 
Sbjct: 188 LTHMFAQQADLEVGEFIWTGGDCHIYDNHTEQVDEQLSRAARPYPTLELN-KAASLFDYT 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           +ED  + +Y+PH  I  KV+V
Sbjct: 247 FEDIAVSNYDPHPLIRGKVAV 267


>gi|228965208|ref|ZP_04126302.1| Thymidylate synthase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228794442|gb|EEM41954.1| Thymidylate synthase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 318

 Score =  365 bits (938), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTSGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +N ++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|256032572|pdb|3EHI|X Chain X, Crystal Structure Of Human Thymidyalte Synthase M190k With
           Loop 181-197 Stabilized In The Inactive Conformation
          Length = 313

 Score =  365 bits (938), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +   ALPPCH L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLKALPPCHALXQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|219682928|ref|YP_002469311.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis AD011]
 gi|219620578|gb|ACL28735.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis AD011]
          Length = 266

 Score =  365 bits (938), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL
Sbjct: 3   YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 62

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  H V IWDEWAD++G+LGP+YGVQWRSWP    D     IDQIS++++ +
Sbjct: 63  KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 123 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   P+M I      L
Sbjct: 183 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEI-RKADSL 241

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++Y +F +  Y  H  I A ++V
Sbjct: 242 FDYQYSNFHIADYRYHPTIKAPIAV 266


>gi|240171163|ref|ZP_04749822.1| thymidylate synthase [Mycobacterium kansasii ATCC 12478]
          Length = 266

 Score =  365 bits (938), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 162/261 (62%), Positives = 196/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ GS + DRTG GTRS FG Q+R+DLS GFPLLTTKKVH+KSV +ELLWFL
Sbjct: 7   YEDLLRLVLETGSAKSDRTGTGTRSLFGQQIRYDLSAGFPLLTTKKVHFKSVAYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSN+ +LH+HGV+IWDEWA + G+LGPIYGVQWRSWP   G  IDQIS+ +  LR DP
Sbjct: 67  RGDSNIGWLHQHGVTIWDEWASETGDLGPIYGVQWRSWPAPSGEHIDQISAALNLLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGDIPQMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+      GEFI T GD H+Y+NH EQ   QL R PR  P++++      +  + 
Sbjct: 187 LTHMMAAQSDLDVGEFIWTGGDCHIYDNHVEQVRQQLRREPRPYPKLVLVQR-DSIFDYA 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  + +Y PH AI A V+V
Sbjct: 246 YEDIHVENYHPHPAIKAPVAV 266


>gi|237785076|ref|YP_002905781.1| Thymidylate synthase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237757988|gb|ACR17238.1| Thymidylate synthase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 275

 Score =  365 bits (937), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 159/261 (60%), Positives = 189/261 (72%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++K G+ R DRTG GT S FG QMRFDLS+ FPLLTTKKV  + +  EL WFL
Sbjct: 16  YEDLLREILKDGNHRDDRTGTGTTSLFGKQMRFDLSEYFPLLTTKKVFMRGLSEELFWFL 75

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SN+  L    V IWDEWAD+DG LGPIYGVQWRSWP  DG  IDQIS  +  ++ +P
Sbjct: 76  RGESNIHSLLEKNVHIWDEWADEDGNLGPIYGVQWRSWPTPDGGTIDQISQALDMIKNNP 135

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNVA +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 136 TSRRIIVSAWNVADVPSMALPPCHLLFQFYVADGKLSCQLYQRSADMFLGVPFNIASYAL 195

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   GEFI T GD H+Y+NH +Q DLQLSR PR  P + +     DL S+ 
Sbjct: 196 LTHMMAQQAGLDVGEFIWTGGDCHIYDNHRDQIDLQLSRDPRPYPTLSL-TKAADLFSYT 254

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  + +Y PH AI A V+V
Sbjct: 255 WDDVDILNYNPHPAIKAPVAV 275


>gi|254515777|ref|ZP_05127837.1| thymidylate synthase [gamma proteobacterium NOR5-3]
 gi|219675499|gb|EED31865.1| thymidylate synthase [gamma proteobacterium NOR5-3]
          Length = 277

 Score =  365 bits (937), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 145/277 (52%), Positives = 181/277 (65%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLLR ++  G  + DRTG GT S FG Q R DL+ GFPLLTTKK+H +S+V+EL+
Sbjct: 1   MQQYQDLLRDILDNGVRKEDRTGTGTLSVFGRQFRHDLADGFPLLTTKKLHLRSIVNELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV++L  HGVSIW+EWA   G+LGP+YG QWR+WP  DG  I+QI  ++  L+
Sbjct: 61  WFLNGDTNVAWLQEHGVSIWNEWATDTGDLGPVYGKQWRAWPTKDGGEINQIDYVLDCLK 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR +  AWNV  +               MALPPCH L+QFYV NG+LS QLY RS
Sbjct: 121 NRPDSRRILFHAWNVEYLPDESLSPQENAAAGRMALPPCHLLYQFYVANGRLSAQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFN AS ++L MMLA   G + GE I + GD HLY NH EQ   QLSR PR L
Sbjct: 181 SDTFLGLPFNTASLAVLVMMLAQQTGLEPGEIIISTGDSHLYLNHMEQVREQLSREPRPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +      +  +R+EDF L  Y PH  I A V+V
Sbjct: 241 PKLALLRRPESIYDYRFEDFELSDYNPHPHIPAPVAV 277


>gi|229150461|ref|ZP_04278677.1| Thymidylate synthase [Bacillus cereus m1550]
 gi|228632954|gb|EEK89567.1| Thymidylate synthase [Bacillus cereus m1550]
          Length = 318

 Score =  365 bits (937), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ YL +H  +IW                                         
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE+++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
              + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CRLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|326334727|ref|ZP_08200934.1| thymidylate synthase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325693177|gb|EGD35109.1| thymidylate synthase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 274

 Score =  365 bits (937), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 160/277 (57%), Positives = 199/277 (71%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL H++  G  + DRTG GT S FGYQ R +L +GFPLLTTKK+H KSV++ELL
Sbjct: 1   MQAYKDLLNHILTHGHSKDDRTGTGTISVFGYQFRCNLQEGFPLLTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  HGV IW+EWAD+ G+LGPIYG QWR+W   +   IDQI+ ++ +L+
Sbjct: 61  WFLRGDTNIHYLTEHGVRIWNEWADEKGDLGPIYGAQWRNW---NNEGIDQIAQVLHTLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH LFQFYV  GKLSCQLYQRS
Sbjct: 118 TNPDSRRMVVSAWNPSVMPDTSVSFAENVAHNKAALPPCHALFQFYVMEGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASY+LLT M+A V G Q G+F+H+ GD+H+Y NH EQ +LQLSR PR L
Sbjct: 178 ADAFLGVPFNIASYALLTQMMAHVTGLQVGDFVHSFGDLHIYKNHLEQVELQLSREPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +NP + DL +F Y DFTL  Y+P+  I  KVSV
Sbjct: 238 PTMKLNPQVKDLFAFDYPDFTLEGYDPYPTIKGKVSV 274


>gi|229818169|ref|ZP_04448451.1| hypothetical protein BIFANG_03464 [Bifidobacterium angulatum DSM
           20098]
 gi|229784420|gb|EEP20534.1| hypothetical protein BIFANG_03464 [Bifidobacterium angulatum DSM
           20098]
          Length = 266

 Score =  365 bits (937), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 148/265 (55%), Positives = 188/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R +   G+ + DRTG GT S FG QMRFDL + FPLLTTK V +K + +ELLWFL
Sbjct: 3   YEDLVRKIFAEGTLKSDRTGTGTISLFGQQMRFDLGEYFPLLTTKTVFFKGLAYELLWFL 62

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSL 119
           +G SN+++L  H V IWDEWAD++G+LGP+YGVQWRSWP          IDQIS+++  +
Sbjct: 63  KGSSNINWLLEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTPQDPNRTIDQISNVLDLI 122

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR +VSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 123 KNHPDSRRMVVSAWNPAEVENMALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIA 182

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G + GEF+ T GD H+Y+NH EQ   QL R P   PQ+ I+     L
Sbjct: 183 SYSLLTLMMAQQAGLEPGEFVWTGGDCHIYDNHVEQFIEQLGREPYPYPQIQIDKEP-SL 241

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF +  Y+ H  I A V+V
Sbjct: 242 FDYKYEDFHILGYQHHPTIKAPVAV 266


>gi|187736511|ref|YP_001878623.1| Thymidylate synthase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426563|gb|ACD05842.1| Thymidylate synthase [Akkermansia muciniphila ATCC BAA-835]
          Length = 271

 Score =  365 bits (937), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 158/271 (58%), Positives = 196/271 (72%), Gaps = 7/271 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL  V+  G+ R DRTG GT   FG Q R+DL  GFP LTTKK+H +S+++ELL
Sbjct: 1   MKQYLALLEDVLSNGAGREDRTGTGTIGVFGRQSRYDLRDGFPCLTTKKLHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ +L  +GVSIWDEWAD++G+LGP+YG QWR WP  DG  IDQI+ +V  L+
Sbjct: 61  WFLKGETNIKFLKDNGVSIWDEWADENGDLGPVYGAQWRCWPGNDGKPIDQIARLVDGLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-------DNGKLSCQLYQRSGDVFLG 173
            +P+SRRHIVSAWNVAL+D MALPPCH LFQF V           LS QLYQRS D+FLG
Sbjct: 121 HNPWSRRHIVSAWNVALVDDMALPPCHSLFQFCVIPAQPGEKKHGLSLQLYQRSADLFLG 180

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +PFNIASY+LL +M A V G++  EFIHT GD+HLY NH +QA  QLSR+PR LP M +N
Sbjct: 181 VPFNIASYALLLLMTAQVCGYEAREFIHTFGDLHLYRNHLDQAREQLSRTPRPLPVMKLN 240

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P +  +  F YEDF L  Y+P   I A +SV
Sbjct: 241 PEVKTIDGFHYEDFELVGYDPLPHIKAPISV 271


>gi|75764380|ref|ZP_00743896.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228900828|ref|ZP_04065043.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222]
 gi|74488132|gb|EAO51832.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228858754|gb|EEN03199.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222]
          Length = 318

 Score =  365 bits (937), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +N ++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNSDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|171741175|ref|ZP_02916982.1| hypothetical protein BIFDEN_00247 [Bifidobacterium dentium ATCC
           27678]
 gi|283455458|ref|YP_003360022.1| thyA Thymidylate synthase [Bifidobacterium dentium Bd1]
 gi|171276789|gb|EDT44450.1| hypothetical protein BIFDEN_00247 [Bifidobacterium dentium ATCC
           27678]
 gi|283102092|gb|ADB09198.1| thyA Thymidylate synthase [Bifidobacterium dentium Bd1]
          Length = 290

 Score =  364 bits (936), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 143/265 (53%), Positives = 185/265 (69%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R ++  G+ + DRTG GT S FG Q+RFDL  GFPLLTTK V +K + +ELLWFL
Sbjct: 27  YEDLVRRIMTEGTLKSDRTGTGTISLFGQQIRFDLKDGFPLLTTKTVFFKGLAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G +NV +L  H V IWDEWAD++G+LGP+YG QWRSWP    D     IDQI++++  +
Sbjct: 87  KGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQWRSWPAPTPDDPNRTIDQITNVLDLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR +VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHHPDSRRMVVSAWNPAEVEHMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT+M+A   G + GEF+ T GD H+Y+NH +Q   QL R P   P++ I+     L
Sbjct: 207 SYSLLTLMMAQQAGLEPGEFVWTGGDCHVYDNHVDQVLEQLGREPYPYPKIRIH-EAESL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             + Y DF +  Y  H  I A V+V
Sbjct: 266 FDYDYSDFEIVDYRHHPTIKAPVAV 290


>gi|326501368|dbj|BAJ98915.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 516

 Score =  364 bits (936), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 180/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +++ G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ V+ ELLW
Sbjct: 234 YQYLNLVQDILRTGARKNDRTGTGTISKFGCQMRFNLRKNFPLLTTKRVFWRGVLEELLW 293

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G +N   L    + IWD  A             ++G+LGP+YG QWR +        
Sbjct: 294 FISGSTNAKVLQEKNIRIWDGNASREYLDSIGLSQREEGDLGPVYGFQWRHFGAEYSDMH 353

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ++ ++  ++ +P  RR I+SAWN   + KMALPPCH   QFYV+NG+LSC
Sbjct: 354 ADYTGKGFDQLADVINKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 413

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     GEF+H +GD H+Y+ H +  + QL 
Sbjct: 414 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGEFVHVIGDAHVYSTHVQALEEQLQ 473

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP   D+ SF   DF L  Y+PH  I  K++V
Sbjct: 474 KQPKPFPILKINPLKKDIDSFVASDFKLACYDPHQKIEMKMAV 516


>gi|90419201|ref|ZP_01227111.1| thymidylate synthase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336138|gb|EAS49879.1| thymidylate synthase [Aurantimonas manganoxydans SI85-9A1]
          Length = 264

 Score =  364 bits (936), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 176/264 (66%), Positives = 217/264 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V++ GSDR DRTG GTRS FG+QMRFDL+ GFP+LTTKK+HWKSVVHELL
Sbjct: 1   MRQYLDLLTRVMETGSDRPDRTGTGTRSVFGHQMRFDLADGFPMLTTKKLHWKSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL+ +GV IWDEWAD+ G+LGP+YG QWRSWPDYDG  IDQI+ +V+++R
Sbjct: 61  WFLKGDTNIAYLNANGVRIWDEWADEHGDLGPVYGAQWRSWPDYDGGHIDQIAKVVEAIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR +VSAWN AL+D+MALPPCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 RTPQSRRLVVSAWNPALVDEMALPPCHCLFQFYVADGRLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A   G + G+F+HTLGD HLY+NH EQA LQL+R+P  LP + +NP I DL 
Sbjct: 181 YALLTAMVAQATGLKPGDFVHTLGDAHLYSNHVEQAQLQLTRTPLPLPTLTLNPAIDDLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +F ++D  L  YE H  I AKV+V
Sbjct: 241 AFGFDDIALEGYEAHPHIKAKVAV 264


>gi|119475457|ref|ZP_01615810.1| Thymidylate synthase [marine gamma proteobacterium HTCC2143]
 gi|119451660|gb|EAW32893.1| Thymidylate synthase [marine gamma proteobacterium HTCC2143]
          Length = 279

 Score =  364 bits (936), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 154/279 (55%), Positives = 194/279 (69%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ VI  G+D+ DRTGVGTRS FG QMRFDLS+GFPL+TTKK+H KS+++EL+
Sbjct: 1   MQQYLDLMQDVIDNGTDKGDRTGVGTRSVFGRQMRFDLSEGFPLVTTKKIHLKSIIYELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G ++ ++L   GVSIWD+WA  DG+LGPIYG QWRSW   DG+ IDQI+ +VQ + 
Sbjct: 61  WFLNGSTDNNWLKERGVSIWDDWALADGDLGPIYGKQWRSWDCPDGSTIDQIADLVQMIN 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVS WN A +                ALPPCH LFQFYV NG+LSCQLYQRS
Sbjct: 121 KSPDSRRLIVSGWNPADLPDESIDPRANVEQGRAALPPCHTLFQFYVANGRLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF--EQADLQLSRSPR 225
            D+FLG+PFNIASYSLLT M+A     + GEF+HTLGD HLY+NH   +    QL R PR
Sbjct: 181 ADLFLGVPFNIASYSLLTHMIAQQCDLEVGEFVHTLGDCHLYSNHLTSDIVYKQLQREPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LPQ+ +      +  +++EDF   +Y+P   I A ++V
Sbjct: 241 ELPQLRLKRRPASIFDYQFEDFEFANYDPLPLIKAPIAV 279


>gi|307108201|gb|EFN56442.1| hypothetical protein CHLNCDRAFT_30873 [Chlorella variabilis]
          Length = 508

 Score =  364 bits (936), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL+++  V+  G  R DRTG GT S FG  MRF+L   FPLLTTK+V W+ V  ELLW
Sbjct: 226 HQYLEMIEDVMANGVFRGDRTGTGTYSKFGATMRFNLRHSFPLLTTKRVFWRGVAEELLW 285

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F+ G +N   L   G+ IWD                ++ +LGP+YG QWR +        
Sbjct: 286 FVSGCTNARVLMDKGIHIWDGNGSREYLDSIGLSHREEMDLGPVYGFQWRHFGAEYTDMH 345

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++ +P  RR ++SAWN A +  MALPPCH   QFYV +G+LSC
Sbjct: 346 ADYGGKGVDQLAELIHKIKTNPNDRRLVLSAWNPAALTDMALPPCHMFCQFYVADGELSC 405

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V G + G+F+H LGD H+Y NH      QL 
Sbjct: 406 QMYQRSCDLGLGVPFNIASYSLLTCMVAQVCGLRPGDFVHVLGDAHVYANHVGPLRDQLK 465

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +PR  P+++INP   D+ SF ++DF L  Y+PH AI  +++V
Sbjct: 466 NAPRHFPRLLINPAKTDIDSFVFDDFQLEGYQPHKAIKMQMAV 508


>gi|299821697|ref|ZP_07053585.1| thymidylate synthase [Listeria grayi DSM 20601]
 gi|299817362|gb|EFI84598.1| thymidylate synthase [Listeria grayi DSM 20601]
          Length = 314

 Score =  364 bits (935), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 151/314 (48%), Positives = 191/314 (60%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L + V++ G+ + DRTG GT STFGYQMRFDL+KGFP+LTTK+V ++ VV ELL
Sbjct: 1   MKQYLELEKFVLEHGTQKGDRTGTGTISTFGYQMRFDLAKGFPILTTKRVAFRLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK---------------------------------- 86
           WFL GD+N+ YL +H  +IW+EWA +                                  
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERYVKSEAYKGPDMTDFGLRAEKDAAFREVYKQEM 120

Query: 87  ----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                            GELG IYG QWR W    G  IDQ+  ++++++  P SRR IV
Sbjct: 121 EAFKQAILTDEAFAATYGELGNIYGKQWREWKTSSGETIDQLKEVIEAIKKTPDSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDVPTMALPPCHTMFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G + GEFIHT+GD HLYNNH EQ   QLSR P+ LP + +      +  F   D +L 
Sbjct: 241 ETGLEVGEFIHTMGDAHLYNNHIEQVKEQLSREPKALPTLRLAEEPASIFDFEVADISLE 300

Query: 251 SYEPHAAILAKVSV 264
            YEPH AI A +SV
Sbjct: 301 GYEPHPAIKAPISV 314


>gi|183602019|ref|ZP_02963388.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis HN019]
 gi|241190505|ref|YP_002967899.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241195911|ref|YP_002969466.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218904|gb|EDT89546.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis HN019]
 gi|240248897|gb|ACS45837.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250465|gb|ACS47404.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295793492|gb|ADG33027.1| thymidylate synthase [Bifidobacterium animalis subsp. lactis V9]
          Length = 290

 Score =  364 bits (935), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL
Sbjct: 27  YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  H V IWDEWAD++G+LGP+YGVQWRSWP    D     IDQIS++++ +
Sbjct: 87  KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   P+M I      L
Sbjct: 207 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEI-RKADSL 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++Y +F +  Y  H  I A ++V
Sbjct: 266 FDYQYSNFHIADYRYHPTIKAPIAV 290


>gi|317508366|ref|ZP_07966039.1| thymidylate synthase [Segniliparus rugosus ATCC BAA-974]
 gi|316253323|gb|EFV12720.1| thymidylate synthase [Segniliparus rugosus ATCC BAA-974]
          Length = 270

 Score =  364 bits (935), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 155/261 (59%), Positives = 193/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G +R DRTG GT S FG+Q+R+DL+KGFPL+TTKKVH KS+V+ELLWFL
Sbjct: 11  YEDLLRLVLEQGVERSDRTGTGTLSVFGHQLRYDLAKGFPLITTKKVHLKSIVYELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+NV +L   GV+IWDEWA +DG LGP+YG QWRSWP  DG V+DQI+  +  LR DP
Sbjct: 71  RGDTNVRWLQERGVTIWDEWAREDGGLGPVYGAQWRSWPAPDGAVVDQIAQALHLLRTDP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
           +SRR +VSAWNV  + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 131 HSRRILVSAWNVGELPKMALAPCHILFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G + G+F+ T GD HLY NH +QA  QL+R P   P++ +      +    
Sbjct: 191 LTHMMAQQAGLEAGDFVWTGGDCHLYLNHVDQAREQLARDPFPYPRLELAERP-SVFEHE 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +  Y+ H AI A V+V
Sbjct: 250 YEDVRILGYQSHPAIKAPVAV 270


>gi|15827801|ref|NP_302064.1| thymidylate synthase [Mycobacterium leprae TN]
 gi|221230278|ref|YP_002503694.1| thymidylate synthase [Mycobacterium leprae Br4923]
 gi|15214323|sp|Q9CBW0|TYSY_MYCLE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|13093353|emb|CAC30470.1| thymidylate synthase [Mycobacterium leprae]
 gi|219933385|emb|CAR71614.1| thymidylate synthase [Mycobacterium leprae Br4923]
          Length = 266

 Score =  364 bits (935), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 162/261 (62%), Positives = 197/261 (75%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V+  G  + DRTG GTRS FG Q+R+DLS GFPL+TTKKVH+KSVV+ELLWFL
Sbjct: 7   YEDLLRLVLDCGVAKMDRTGTGTRSLFGQQLRYDLSVGFPLVTTKKVHFKSVVYELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGDSNV++LH HGV+IWDEWA   G+LGPIYGVQWRSWP   G+ IDQIS+ +  LR +P
Sbjct: 67  RGDSNVAWLHEHGVNIWDEWASSTGDLGPIYGVQWRSWPTSSGDYIDQISTALDLLRTEP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR IVSAWNV  I +MALPPCH  FQFYV  G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRIIVSAWNVGEIPQMALPPCHAFFQFYVAQGRLSCQLYQRSADMFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A+  G   GEF+ T GD H+Y+NH EQ  LQLSR PR  P++ +      +  + 
Sbjct: 187 LTHMMAAQSGLLVGEFVWTGGDCHIYDNHVEQVQLQLSREPRAYPELFLAQR-DSIFDYV 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  + +Y+PH AI A V++
Sbjct: 246 YEDVVVTNYDPHPAIKAPVAI 266


>gi|47570165|ref|ZP_00240821.1| thymidylate synthase [Bacillus cereus G9241]
 gi|47553184|gb|EAL11579.1| thymidylate synthase [Bacillus cereus G9241]
          Length = 318

 Score =  364 bits (935), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRQFPELTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|228933544|ref|ZP_04096395.1| Thymidylate synthase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228826142|gb|EEM71924.1| Thymidylate synthase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
          Length = 318

 Score =  364 bits (935), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 147/313 (46%), Positives = 195/313 (62%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +   +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQQNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++  P SRR IVS
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + G F+HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  
Sbjct: 246 CGLEVGAFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I A V+V
Sbjct: 306 YDPHPVIKAPVAV 318


>gi|304382975|ref|ZP_07365456.1| thymidylate synthase [Prevotella marshii DSM 16973]
 gi|304335894|gb|EFM02143.1| thymidylate synthase [Prevotella marshii DSM 16973]
          Length = 282

 Score =  364 bits (934), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 167/264 (63%), Positives = 203/264 (76%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  ++  G+ + DRTG GT S FG+QMRF +  GFPLLTTK++H KS+++ELL
Sbjct: 19  MKQYLDLLHLLLTEGTKKGDRTGTGTLSVFGHQMRFRMEDGFPLLTTKRLHLKSIIYELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGVSIWDEWAD +G+LGP+YG QWRSW    G  IDQI  ++  LR
Sbjct: 79  WFLKGDTNVRYLQEHGVSIWDEWADANGDLGPVYGHQWRSWAGPKGETIDQIQGVLNQLR 138

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN A +D MALPPCHCLFQFYV  G+LS QLYQRS D FLG+PFNIAS
Sbjct: 139 QNPDSRRMIVSAWNPAEVDSMALPPCHCLFQFYVAEGRLSLQLYQRSADTFLGVPFNIAS 198

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL +M+A V G + G+F++T GD HLY NH EQA LQL+R+PR LP M +NP+I DL 
Sbjct: 199 YALLLLMMAQVTGLRAGDFVYTTGDTHLYLNHTEQARLQLTRTPRPLPTMKLNPDIADLF 258

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           SFRYEDF L +Y+P+  I A VSV
Sbjct: 259 SFRYEDFQLSNYDPYDHIKADVSV 282


>gi|299469759|emb|CBN76613.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 581

 Score =  364 bits (934), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 128/283 (45%), Positives = 176/283 (62%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYL+L+  ++  G  R DRTG GT S FG QMRF L +  FPLLTTK+V W+ V  ELLW
Sbjct: 299 QYLNLVEDILDNGVRRGDRTGTGTLSKFGVQMRFSLREERFPLLTTKRVFWRGVAEELLW 358

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G +N + L   G+ IWD                ++G+LGP+YG QWR +        
Sbjct: 359 FVAGCTNANVLKERGIHIWDGNGSREFLDGLGLTEREEGDLGPVYGFQWRHFGAEYTDMH 418

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++  +Q ++ +P  RR ++SAWN A + KMALPPCH   QFYV  G+LSC
Sbjct: 419 ADYTGKGVDQLAECIQKIKTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSC 478

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT ++A   G + G+F+HT+GD H+Y NH +    QL 
Sbjct: 479 QMYQRSADMGLGVPFNIASYALLTRLVAQACGLKAGDFVHTIGDAHVYVNHVDALREQLK 538

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P + IN +  D+ SF Y+   ++ Y P+  I  K++V
Sbjct: 539 RKPRPFPTLSINTDETDIDSFEYKHLEVKGYSPYKTIKMKMAV 581


>gi|297571008|ref|YP_003696782.1| thymidylate synthase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931355|gb|ADH92163.1| thymidylate synthase [Arcanobacterium haemolyticum DSM 20595]
          Length = 266

 Score =  364 bits (934), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 144/264 (54%), Positives = 186/264 (70%), Gaps = 2/264 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY DLL  V+  G+ + DRTG GT S FG Q+R+DLS+GFP +TTK V  K+V  ELLW
Sbjct: 4   RQYEDLLADVLANGTVKGDRTGTGTLSVFGRQLRYDLSQGFPRITTKFVAMKAVKGELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGD+N+S+L   G+SIWDEWA+ DG+LGP+YG QWRSWP   G  IDQI++++  ++ 
Sbjct: 64  FLRGDTNISWLRERGISIWDEWANDDGDLGPVYGYQWRSWPAPSGEHIDQIANVIDQIKN 123

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR IVSAWNVA +D MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY
Sbjct: 124 NPDSRRLIVSAWNVADLDAMALQPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASY 183

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A   G   G+F+ + GD H+Y NH EQ   Q+SR P   P + +     D+ S
Sbjct: 184 ALLTHMVAQQTGLDVGDFVWSGGDCHIYLNHLEQVREQISREPYPFPTLAL-TKAPDIFS 242

Query: 242 FRYEDFT-LRSYEPHAAILAKVSV 264
           +  +D +    Y+ H A+ A V+V
Sbjct: 243 YTMDDISAADGYQHHPALHAPVAV 266


>gi|195576199|ref|XP_002077964.1| GD22790 [Drosophila simulans]
 gi|194189973|gb|EDX03549.1| GD22790 [Drosophila simulans]
          Length = 321

 Score =  364 bits (934), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 141/286 (49%), Positives = 184/286 (64%), Gaps = 23/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+ YLDLLRH+I  G  R DRT VGT S FG QMRFD+   FPLLTTK+V +++V  ELL
Sbjct: 37  MN-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+ G ++   L    V IWD  + ++            G+LGP+YG QWR +       
Sbjct: 96  WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158
             DY G  IDQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QFYV    G+
Sbjct: 156 DDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGE 215

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    
Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R+PR  P++II   + D+  FR+EDF +  Y PH  I  +++V
Sbjct: 276 QLERTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPHPKIKMEMAV 321


>gi|289178234|gb|ADC85480.1| Thymidylate synthase [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 297

 Score =  364 bits (934), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 150/265 (56%), Positives = 192/265 (72%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S FG QMRFDL+KGFPLLTTK+V +K + +ELLWFL
Sbjct: 34  YEDLLRKILMEGNLKNDRTGTGTISLFGQQMRFDLAKGFPLLTTKRVFFKGIAYELLWFL 93

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  H V IWDEWAD++G+LGP+YGVQWRSWP    D     IDQIS++++ +
Sbjct: 94  KGSSNVHWLQEHNVHIWDEWADENGDLGPVYGVQWRSWPAPTADDPDRTIDQISNVLELI 153

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           + +P SRR +V+AWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNIA
Sbjct: 154 KHNPDSRRMVVTAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFLGVPFNIA 213

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLTMM+A   G + GEF+ T GD H+Y+NH EQ   QLSR P   P+M I      L
Sbjct: 214 SYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHVEQVLEQLSREPYPYPRMEI-RKADSL 272

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++Y +F +  Y  H  I A ++V
Sbjct: 273 FDYQYSNFHIADYRYHPTIKAPIAV 297


>gi|118602621|ref|YP_903836.1| thymidylate synthase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166231728|sp|A1AWQ8|TYSY_RUTMC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|118567560|gb|ABL02365.1| thymidylate synthase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 264

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD LR V   G+++ DRTG+GT S FGYQMRFDLS GFPL+TTK+VH  SVVHELL
Sbjct: 1   MKQYLDFLRLVKNTGTNKTDRTGIGTTSLFGYQMRFDLSDGFPLITTKRVHLPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL  +GV IW+EWADK+G+LGPIYGVQWR+W +  G  IDQI  +++ ++
Sbjct: 61  WFLSGATNIKYLQENGVRIWNEWADKNGDLGPIYGVQWRNWQNVRGESIDQIMQVIEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  ++ MALPPCH  FQFYV  GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NTPDSRRIIVSAWNVGELENMALPPCHAFFQFYVALGKLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + G+FI + GD H+Y+NH +Q ++QL+R+P+TL  + IN     + 
Sbjct: 181 YALLTHMMAQQCDLEVGDFIWSGGDCHIYSNHTKQVEIQLARTPKTLATLKINNKPDSIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF   +Y   A I A V++
Sbjct: 241 DYNFEDFEFINYVFDAYIKATVAI 264


>gi|311693477|gb|ADP96350.1| thymidylate synthase [marine bacterium HP15]
          Length = 279

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 147/279 (52%), Positives = 189/279 (67%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ V+  G D+ DRTGVGTRS FG Q+RF+L +GFPL+TTKKVH +S+++ELL
Sbjct: 1   MKAYLDLMQDVVDNGFDKGDRTGVGTRSVFGRQIRFNLQEGFPLVTTKKVHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG ++ ++L    VSIW+EWA ++G+LGPIYG QWRSW   +G V+DQIS +++ +R
Sbjct: 61  WFLRGSTDNTWLQERKVSIWNEWALENGDLGPIYGKQWRSWQCPNGEVVDQISEVIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWN A +               MAL PCHCLFQFYV +GKLSCQLYQRS
Sbjct: 121 TKPNSRRLIVSAWNPAELPDESIGPQDNVREGRMALAPCHCLFQFYVVDGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLSRSPR 225
            D+FLG+PFNIASY+LLT M+A       GEF+HT GD HLY NH        QL R PR
Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYQNHLTDDIVFEQLKREPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP ++I      +  +  EDF    Y+P+  I A +++
Sbjct: 241 ALPTLVIKRKPASIFEYELEDFDFEGYDPYPGIKAPIAI 279


>gi|228471682|ref|ZP_04056455.1| thymidylate synthase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276835|gb|EEK15530.1| thymidylate synthase [Capnocytophaga gingivalis ATCC 33624]
          Length = 274

 Score =  363 bits (933), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 157/277 (56%), Positives = 199/277 (71%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DLL H++ +G  + DRTG GT S FGYQ+R +L +GFPLLTTKK+H KSV++ELL
Sbjct: 1   MQAYKDLLNHILTYGHSKDDRTGTGTISVFGYQLRHNLQEGFPLLTTKKIHLKSVIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL  HGV IW+EWAD+ G+LGP+YG QWR+W   +G  IDQI+ ++ +L+
Sbjct: 61  WFLRGDTNIHYLTEHGVRIWNEWADEQGDLGPVYGAQWRNW---NGEGIDQITEVLHTLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH LFQFYV  G+LSCQLYQRS
Sbjct: 118 TNPDSRRMVVSAWNPSVMPDTSLSFAENVANNKAALPPCHALFQFYVMEGRLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASY+LLT M+A V G Q G+F+H+ GD+H+Y NH EQ  LQLSR PR L
Sbjct: 178 ADAFLGVPFNIASYALLTQMMAHVTGLQVGDFVHSFGDLHIYKNHLEQVKLQLSREPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P M +N  + DL +F Y DF L  Y+P+  I  KVSV
Sbjct: 238 PTMKLNEKVTDLFAFDYSDFILEGYDPYPTIKGKVSV 274


>gi|189095970|pdb|2RD8|B Chain B, Human Thymidylate Synthase Stabilized In Active
           Conformation By R163k Mutation: Asymmetry And Reactivity
           Of Cys195
          Length = 313

 Score =  363 bits (932), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPP H L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPXHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|53803146|ref|YP_115128.1| thymidylate synthase [Methylococcus capsulatus str. Bath]
 gi|62901250|sp|Q603S2|TYSY_METCA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|53756907|gb|AAU91198.1| thymidylate synthase [Methylococcus capsulatus str. Bath]
          Length = 260

 Score =  363 bits (932), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 145/264 (54%), Positives = 181/264 (68%), Gaps = 4/264 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  + DRTG GT S FG  MRFDLS+G PL+TTKK+H  S++HELL
Sbjct: 1   MRPYLDLLRDILDHGCPKGDRTGTGTLSVFGRMMRFDLSRGLPLVTTKKLHLPSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+ G +NV  L RHGV+IWDEWAD +GELGP+YG QWR+W       IDQ++ +V+ LR
Sbjct: 61  WFVSGSTNVRDLQRHGVTIWDEWADDNGELGPVYGRQWRNWN----GAIDQLAGLVEQLR 116

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VSAWN + +D MALPPCH  FQ +V +G+LS     RS DVFLG+PFNIA 
Sbjct: 117 RNPGSRRLLVSAWNPSDLDAMALPPCHYAFQCHVADGRLSLMFQMRSADVFLGLPFNIAG 176

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA   G++ GE I   GDVHLY NH EQA LQL+R P   P + +      L 
Sbjct: 177 YALLTHMLAQQTGYEPGELIWCGGDVHLYLNHLEQARLQLTREPYPPPTLKLARKPGSLF 236

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +RYEDF +  Y+ H  I A V+V
Sbjct: 237 DYRYEDFVVEDYQAHPHIKAAVAV 260


>gi|197104285|ref|YP_002129662.1| thymidylate synthase [Phenylobacterium zucineum HLK1]
 gi|196477705|gb|ACG77233.1| thymidylate synthase [Phenylobacterium zucineum HLK1]
          Length = 286

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 169/268 (63%), Positives = 203/268 (75%), Gaps = 6/268 (2%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+LL  +++ G+ R DRTG GT   FG QMRFDLS+GFPLLTTKK+H KS++ ELLW
Sbjct: 20  RQYLNLLADILETGAARGDRTGTGTLGVFGRQMRFDLSQGFPLLTTKKLHRKSIILELLW 79

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FLRGD+NV +L   GVSIWDEWAD DGELGP+YG QWRSW   DG VIDQIS +V SL+ 
Sbjct: 80  FLRGDTNVRWLQERGVSIWDEWADADGELGPVYGKQWRSWAAPDGRVIDQISGVVNSLKT 139

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVFLGIPF 176
           +P SRRHIVSAWN A ++ MALPPCHCLFQF+V        +LSCQLYQRS DVFLG+PF
Sbjct: 140 NPESRRHIVSAWNPAEVEDMALPPCHCLFQFFVAPDRDGVKRLSCQLYQRSADVFLGVPF 199

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           NIASY+LLT+M+A V G+  GEF+HTLGD HLY NH EQA +QL+R P  LP M +  + 
Sbjct: 200 NIASYALLTLMMAKVTGYAPGEFVHTLGDAHLYLNHVEQARIQLAREPMPLPVMHVA-DR 258

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            DL +F YEDF L  Y+ H +I A ++V
Sbjct: 259 DDLFAFAYEDFKLEGYQAHPSIPAPIAV 286


>gi|258544418|ref|ZP_05704652.1| thymidylate synthase [Cardiobacterium hominis ATCC 15826]
 gi|258520307|gb|EEV89166.1| thymidylate synthase [Cardiobacterium hominis ATCC 15826]
          Length = 258

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 159/264 (60%), Positives = 198/264 (75%), Gaps = 6/264 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLRH+++ G+ + DRTG GTRS FGYQMRFDL++GFPLLTTK+VH+KSV +ELL
Sbjct: 1   MQTYLDLLRHILEHGAPKADRTGTGTRSVFGYQMRFDLTRGFPLLTTKRVHFKSVAYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ +LH HGVSIWDEWAD  G+LGP+YG QWR W        DQI++++  LR
Sbjct: 61  WFLRGDTNIHWLHEHGVSIWDEWADARGDLGPVYGKQWRDWGGC-----DQIANVLDLLR 115

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  + +MAL PCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 116 TDPDSRRMIVSAWNVGELPQMALAPCHALFQFYVAGGRLSCQLYQRSADVFLGVPFNIAS 175

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q GE + T GDVHLYNNH  QA+ QL+R P  LP + +  +   + 
Sbjct: 176 YALLIHMMAQQANLQPGELVWTGGDVHLYNNHLAQAETQLAREPYPLPTLAL-RHAPSID 234

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           +++Y D TL++Y+ H AI A V+V
Sbjct: 235 AYQYSDITLQNYQSHPAIPAPVAV 258


>gi|254474624|ref|ZP_05088010.1| thymidylate synthase [Ruegeria sp. R11]
 gi|214028867|gb|EEB69702.1| thymidylate synthase [Ruegeria sp. R11]
          Length = 277

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 141/277 (50%), Positives = 189/277 (68%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY + L  ++  G    DRTG GT S FG Q R+ L+ GFPL+TTKK+H +S++HELL
Sbjct: 1   MRQYHEALEQILTHGEASSDRTGTGTISYFGMQTRYPLADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P              Y   
Sbjct: 61  WFLSGDTNIRYLKENGVSIWDEWADENGDLGPVYGHQWRHFPRLELAEGTTGDEPLYRAG 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQI+ +V+ +   P SRR IVSAWN A +  MALPPCH L+Q  V   K+  QLYQRS
Sbjct: 121 SVDQIADLVRMIETSPDSRRLIVSAWNPADVPDMALPPCHTLWQVRVQGRKMHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LL  MLA V G++ G+F+HT+GD H+Y+NH +Q  LQLSR+P+ L
Sbjct: 181 ADMFLGVPFNIASYALLLKMLAHVTGYEAGDFVHTIGDAHIYSNHMDQVKLQLSRTPKPL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I  ++  +  F YEDF + +Y+P   I A V+V
Sbjct: 241 PELHIKRDVPSIFDFTYEDFEVVNYDPDPVIKAPVAV 277


>gi|296394396|ref|YP_003659280.1| thymidylate synthase [Segniliparus rotundus DSM 44985]
 gi|296181543|gb|ADG98449.1| thymidylate synthase [Segniliparus rotundus DSM 44985]
          Length = 270

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 156/261 (59%), Positives = 195/261 (74%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR V++ G++R DRTG GT S FG+Q+R+DL+KGFPL+TTKKVH KS+VHELLWFL
Sbjct: 11  YEDLLRLVLERGAERPDRTGTGTLSLFGHQLRYDLAKGFPLVTTKKVHLKSIVHELLWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+NV +L   GV+IWDEWA +DG LGP+YG QWRSWP  DG V+DQI   V+ LR+DP
Sbjct: 71  RGDTNVRWLQERGVTIWDEWAREDGSLGPVYGAQWRSWPTPDGEVVDQIDQAVRLLRSDP 130

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
           +SRR +VSAWNV  + KMAL PCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 131 HSRRIVVSAWNVGELSKMALAPCHILFQFYVADGKLSCQLYQRSADLFLGVPFNIASYAL 190

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   G+F+ T GD HLY NH +QA  Q++R+P   P++ +      +  + 
Sbjct: 191 LTHMMAQQAGLHVGDFVWTGGDCHLYRNHLDQAREQIARTPYPYPRLEL-RQRPSVFEYE 249

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           YED  +  Y  H AI A V+V
Sbjct: 250 YEDIQIVDYRSHPAIKAPVAV 270


>gi|84687905|ref|ZP_01015772.1| thymidylate synthase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664099|gb|EAQ10596.1| thymidylate synthase [Rhodobacterales bacterium HTCC2654]
          Length = 272

 Score =  363 bits (931), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 146/272 (53%), Positives = 193/272 (70%), Gaps = 8/272 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L+ V+  G    DRTG GT S FG Q R+ L++GFPL+TTKK+H +S+VHELL
Sbjct: 1   MRQYLDALKTVLDQGVPSTDRTGTGTTSYFGMQCRYPLAEGFPLVTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGN--------VIDQI 112
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P  D           +DQI
Sbjct: 61  WFLSGDTNIGYLKENGVSIWDEWADENGDLGPVYGHQWRHFPKIDRGADGAPVIGEVDQI 120

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
           + +V+ +R  P SRR IVSAWN   +  MALPPCH L+Q  +  GKL  QLYQRS D+FL
Sbjct: 121 ADLVEQIRRSPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRIIGGKLHLQLYQRSADMFL 180

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G+PFNIASY+LL +MLA V G++ G+F+H++GD H+Y+NH +Q   QLSR+PR LPQ+ I
Sbjct: 181 GVPFNIASYALLQVMLAHVTGYEPGDFVHSIGDAHIYSNHMDQVHEQLSRTPRPLPQIEI 240

Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             ++  +  F+Y+DF    Y+P  AI A V+V
Sbjct: 241 KRHVGSIFDFKYDDFAFPGYDPAPAIKAPVAV 272


>gi|257082535|ref|ZP_05576896.1| thymidylate synthase [Enterococcus faecalis E1Sol]
 gi|256990565|gb|EEU77867.1| thymidylate synthase [Enterococcus faecalis E1Sol]
          Length = 315

 Score =  363 bits (931), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LEVGEFVHTLGDAHLYKNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|312373107|gb|EFR20923.1| hypothetical protein AND_18288 [Anopheles darlingi]
          Length = 295

 Score =  363 bits (931), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 139/282 (49%), Positives = 179/282 (63%), Gaps = 21/282 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL L+R ++  G+ R DRTGVGT S FG Q+R+ L  G FPLLTTKKV ++ +  ELLWF
Sbjct: 14  YLQLIRDIVSKGNKRSDRTGVGTLSIFGTQLRYSLRDGTFPLLTTKKVFFRGIAEELLWF 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102
           +RG +N   L   GV IWD  +             ++G+LGP+YG QWR +         
Sbjct: 74  IRGSTNAKELQAKGVRIWDGNSTREFLDSCGFTDREEGDLGPVYGFQWRHFGATYGTCHD 133

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G   DQ++ I+  L+ +P  RR I+SAWN   I  MALPPCHCL QFYV NG+LSCQ
Sbjct: 134 DYTGKGKDQLAEIIDKLKNNPTDRRIILSAWNPVDIPIMALPPCHCLVQFYVANGELSCQ 193

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS DV LG+PFNIASYSLLT M+A V G + GEFIHT+GD H+Y NH +    QL R
Sbjct: 194 MYQRSADVGLGVPFNIASYSLLTHMIAHVTGLKAGEFIHTMGDTHIYLNHVDALKEQLQR 253

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P+  P + I   +  +  F+YEDF +  Y PH AI  +++V
Sbjct: 254 EPKPFPTLTIKRQVASIDDFQYEDFAINDYNPHPAIKMEMAV 295


>gi|290560084|pdb|3EBU|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
           Its Kinetic Properties And Intracellular Stability
          Length = 313

 Score =  362 bits (930), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPP H L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPXHALCQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|94676836|ref|YP_588974.1| thymidylate synthase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|122988104|sp|Q1LSU0|TYSY_BAUCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|94219986|gb|ABF14145.1| thymidylate synthase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 264

 Score =  362 bits (929), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 197/264 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+R V   G  + DRT  GT S FG+QMRF+LS GFPL+TTK+ H +S+++ELL
Sbjct: 1   MKQYLELMRLVRTQGISKVDRTNTGTLSIFGHQMRFNLSHGFPLITTKRCHLRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N++YL +H V+IWDEW ++ G+LGPIYG QWR+W   DG+ IDQ+S ++  L+
Sbjct: 61  WFLNGDTNINYLRKHHVTIWDEWINEKGDLGPIYGRQWRAWGTADGSYIDQLSDVMLQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  I +MAL PCH LFQFYV NG LSCQLYQRS D+FLG+PFNI+S
Sbjct: 121 HNPDSRRIIVSAWNVGEIKQMALAPCHVLFQFYVANGVLSCQLYQRSCDMFLGLPFNISS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     Q GEFI T GD+HLY NH +Q DLQL R+PR LPQ+II      L 
Sbjct: 181 YALLIHMVAQQCDLQLGEFIWTGGDIHLYRNHLKQTDLQLKRNPRPLPQLIIKRRPASLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++++DF L  Y+PH AI A+V+V
Sbjct: 241 QYQFDDFYLSGYDPHPAIKAQVAV 264


>gi|29376139|ref|NP_815293.1| thymidylate synthase [Enterococcus faecalis V583]
 gi|227518767|ref|ZP_03948816.1| thymidylate synthase [Enterococcus faecalis TX0104]
 gi|227553378|ref|ZP_03983427.1| thymidylate synthase [Enterococcus faecalis HH22]
 gi|229550000|ref|ZP_04438725.1| thymidylate synthase [Enterococcus faecalis ATCC 29200]
 gi|255972782|ref|ZP_05423368.1| thymidylate synthase [Enterococcus faecalis T1]
 gi|256619078|ref|ZP_05475924.1| thymidylate synthase [Enterococcus faecalis ATCC 4200]
 gi|256762514|ref|ZP_05503094.1| thymidylate synthase [Enterococcus faecalis T3]
 gi|256965110|ref|ZP_05569281.1| thymidylate synthase [Enterococcus faecalis HIP11704]
 gi|257089900|ref|ZP_05584261.1| thymidylate synthase [Enterococcus faecalis CH188]
 gi|257416108|ref|ZP_05593102.1| thymidylate synthase [Enterococcus faecalis AR01/DG]
 gi|257419311|ref|ZP_05596305.1| thymidylate synthase [Enterococcus faecalis T11]
 gi|257422604|ref|ZP_05599594.1| thymidylate synthase [Enterococcus faecalis X98]
 gi|307273209|ref|ZP_07554455.1| thymidylate synthase [Enterococcus faecalis TX0855]
 gi|307274946|ref|ZP_07556109.1| thymidylate synthase [Enterococcus faecalis TX2134]
 gi|312900775|ref|ZP_07760072.1| thymidylate synthase [Enterococcus faecalis TX0470]
 gi|312903323|ref|ZP_07762503.1| thymidylate synthase [Enterococcus faecalis TX0635]
 gi|312951509|ref|ZP_07770405.1| thymidylate synthase [Enterococcus faecalis TX0102]
 gi|62901361|sp|Q834R3|TYSY_ENTFA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|29343601|gb|AAO81363.1| thymidylate synthase [Enterococcus faecalis V583]
 gi|227073762|gb|EEI11725.1| thymidylate synthase [Enterococcus faecalis TX0104]
 gi|227177483|gb|EEI58455.1| thymidylate synthase [Enterococcus faecalis HH22]
 gi|229304913|gb|EEN70909.1| thymidylate synthase [Enterococcus faecalis ATCC 29200]
 gi|255963800|gb|EET96276.1| thymidylate synthase [Enterococcus faecalis T1]
 gi|256598605|gb|EEU17781.1| thymidylate synthase [Enterococcus faecalis ATCC 4200]
 gi|256683765|gb|EEU23460.1| thymidylate synthase [Enterococcus faecalis T3]
 gi|256955606|gb|EEU72238.1| thymidylate synthase [Enterococcus faecalis HIP11704]
 gi|256998712|gb|EEU85232.1| thymidylate synthase [Enterococcus faecalis CH188]
 gi|257157936|gb|EEU87896.1| thymidylate synthase [Enterococcus faecalis ARO1/DG]
 gi|257161139|gb|EEU91099.1| thymidylate synthase [Enterococcus faecalis T11]
 gi|257164428|gb|EEU94388.1| thymidylate synthase [Enterococcus faecalis X98]
 gi|306508394|gb|EFM77501.1| thymidylate synthase [Enterococcus faecalis TX2134]
 gi|306510194|gb|EFM79218.1| thymidylate synthase [Enterococcus faecalis TX0855]
 gi|310630475|gb|EFQ13758.1| thymidylate synthase [Enterococcus faecalis TX0102]
 gi|310633199|gb|EFQ16482.1| thymidylate synthase [Enterococcus faecalis TX0635]
 gi|311292256|gb|EFQ70812.1| thymidylate synthase [Enterococcus faecalis TX0470]
 gi|315147280|gb|EFT91296.1| thymidylate synthase [Enterococcus faecalis TX4244]
 gi|315150521|gb|EFT94537.1| thymidylate synthase [Enterococcus faecalis TX0012]
 gi|315152468|gb|EFT96484.1| thymidylate synthase [Enterococcus faecalis TX0031]
 gi|315155746|gb|EFT99762.1| thymidylate synthase [Enterococcus faecalis TX0043]
 gi|315158088|gb|EFU02105.1| thymidylate synthase [Enterococcus faecalis TX0312]
 gi|315169020|gb|EFU13037.1| thymidylate synthase [Enterococcus faecalis TX1341]
 gi|315169743|gb|EFU13760.1| thymidylate synthase [Enterococcus faecalis TX1342]
 gi|315172296|gb|EFU16313.1| thymidylate synthase [Enterococcus faecalis TX1346]
 gi|315575852|gb|EFU88043.1| thymidylate synthase [Enterococcus faecalis TX0309B]
 gi|315577691|gb|EFU89882.1| thymidylate synthase [Enterococcus faecalis TX0630]
 gi|315580504|gb|EFU92695.1| thymidylate synthase [Enterococcus faecalis TX0309A]
 gi|327535148|gb|AEA93982.1| thymidylate synthase [Enterococcus faecalis OG1RF]
          Length = 315

 Score =  362 bits (929), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|313246913|emb|CBY35764.1| unnamed protein product [Oikopleura dioica]
          Length = 294

 Score =  362 bits (929), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 137/284 (48%), Positives = 184/284 (64%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLD+ R++I  G  + DRTG GTRS FG QMRF L+   FPLLTTKK   + +  ELL
Sbjct: 11  QQYLDICRNIIDNGHQKGDRTGTGTRSIFGGQMRFSLADNAFPLLTTKKTFLRGITEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------ 102
           WF+RG +N   L    V IWD                ++ +LGP+YG QWR +       
Sbjct: 71  WFIRGSTNAKELSDKKVRIWDANGSRAFLDSRGLHNREEWDLGPVYGFQWRHFGAKYGTM 130

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+  +++++R +P  RR ++ AWN   +D+MALPPCHCL QFYV NGKLS
Sbjct: 131 HDDYTGKGVDQLQKVIETIRNNPNDRRMLMVAWNPVDLDEMALPPCHCLCQFYVANGKLS 190

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+L+T+M+A V   + G+F+HTLGD H+YNNH +Q + Q+
Sbjct: 191 CQLYQRSCDMGLGVPFNIASYALMTIMIAHVTNLEPGDFVHTLGDAHVYNNHIDQLEEQI 250

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +R PR  P+M I   + D+ SF+ EDF L  YEP+ AI   ++V
Sbjct: 251 ARVPRKFPKMKITRKVEDIESFKMEDFELSEYEPYPAIKMPMAV 294


>gi|152975426|ref|YP_001374943.1| thymidylate synthase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189036926|sp|A7GP90|TYSY_BACCN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|152024178|gb|ABS21948.1| Thymidylate synthase [Bacillus cytotoxicus NVH 391-98]
          Length = 318

 Score =  362 bits (929), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 193/313 (61%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   YEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL +H  +IW+EWA K+                                  
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKNWVESDEYKGPDMTNFGLRSQEDEAFKTQYDEQME 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR+W    G  IDQ+  +++ ++  P SRR IVS
Sbjct: 126 IFKKNVLEDDEFARKYGYLGDVYGKQWRAWKTAAGETIDQLKDVIEMIKKTPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A  
Sbjct: 186 AWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G   GEF+HT+GD H+Y NHFEQ   QL+R PR  P + +N ++  +  F   D T+  
Sbjct: 246 CGLAVGEFVHTIGDAHIYTNHFEQVKKQLAREPRPFPTLKLNSDVKSVFDFEMGDLTIEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 306 YDPHPAIKAPVAV 318


>gi|77550896|gb|ABA93693.1| Bifunctional dihydrofolate reductase-thymidylate synthase,
           putative, expressed [Oryza sativa Japonica Group]
          Length = 521

 Score =  362 bits (929), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 129/283 (45%), Positives = 176/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL+L+  +I+ G+ + DRTG GT S FG QMRF+L   FPLLTTKKV W+ VV ELLW
Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F+ G ++   L   G+ IWD                ++G+LGP+YG QWR +        
Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN + + KMALPPCH   QFYV++G+LSC
Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVESGELSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V G   GEF+H +GD H+Y  H    + Q+ 
Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAHVCGLSPGEFVHVIGDAHVYRTHVRALEEQIQ 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP   D+ SF   DF L  Y+PH  I  K+++
Sbjct: 479 KLPKPFPVLKINPLKKDIDSFVASDFKLVGYDPHQKIEMKMAI 521


>gi|255264088|ref|ZP_05343430.1| thymidylate synthase [Thalassiobium sp. R2A62]
 gi|255106423|gb|EET49097.1| thymidylate synthase [Thalassiobium sp. R2A62]
          Length = 268

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 146/268 (54%), Positives = 197/268 (73%), Gaps = 4/268 (1%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D L  +++ G    DRTG GT S FG Q R+ ++ GFPL+TTKK+H +S++HELL
Sbjct: 1   MQQYHDALATILETGIRSSDRTGTGTISCFGMQQRYAMADGFPLVTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV----IDQISSIV 116
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR +P  D       +DQI+ +V
Sbjct: 61  WFLSGDTNIKYLKDNGVSIWDEWADENGDLGPVYGRQWRQFPRIDPQGGIASVDQITDLV 120

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
            ++RA P SRR IVSAWN   +  MALPPCH L+Q  + +GKL  QLYQRS D+FLG+PF
Sbjct: 121 DAIRATPDSRRLIVSAWNPGDVPDMALPPCHTLWQVRILDGKLHLQLYQRSADMFLGVPF 180

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           NIASY+LL +MLA V G++ G+F+HTLGD H+Y+NH EQ +LQLSR+P+TLP + +  ++
Sbjct: 181 NIASYALLQLMLAHVTGYEVGDFVHTLGDAHIYSNHMEQVELQLSRTPKTLPIIRLTRDV 240

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             +  F++EDF +  Y+PH AI A V+V
Sbjct: 241 GSIFDFKFEDFEVVGYDPHPAIRAPVAV 268


>gi|256961912|ref|ZP_05566083.1| thymidylate synthase [Enterococcus faecalis Merz96]
 gi|257085168|ref|ZP_05579529.1| thymidylate synthase [Enterococcus faecalis Fly1]
 gi|293382980|ref|ZP_06628898.1| thymidylate synthase [Enterococcus faecalis R712]
 gi|293389531|ref|ZP_06633988.1| thymidylate synthase [Enterococcus faecalis S613]
 gi|312907549|ref|ZP_07766540.1| thymidylate synthase [Enterococcus faecalis DAPTO 512]
 gi|312910167|ref|ZP_07769014.1| thymidylate synthase [Enterococcus faecalis DAPTO 516]
 gi|256952408|gb|EEU69040.1| thymidylate synthase [Enterococcus faecalis Merz96]
 gi|256993198|gb|EEU80500.1| thymidylate synthase [Enterococcus faecalis Fly1]
 gi|291079645|gb|EFE17009.1| thymidylate synthase [Enterococcus faecalis R712]
 gi|291081148|gb|EFE18111.1| thymidylate synthase [Enterococcus faecalis S613]
 gi|310626577|gb|EFQ09860.1| thymidylate synthase [Enterococcus faecalis DAPTO 512]
 gi|311289440|gb|EFQ67996.1| thymidylate synthase [Enterococcus faecalis DAPTO 516]
          Length = 315

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDAILNDEEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|229545808|ref|ZP_04434533.1| thymidylate synthase [Enterococcus faecalis TX1322]
 gi|256853140|ref|ZP_05558510.1| thymidylate synthase [Enterococcus faecalis T8]
 gi|300861235|ref|ZP_07107322.1| thymidylate synthase [Enterococcus faecalis TUSoD Ef11]
 gi|307291981|ref|ZP_07571850.1| thymidylate synthase [Enterococcus faecalis TX0411]
 gi|229309120|gb|EEN75107.1| thymidylate synthase [Enterococcus faecalis TX1322]
 gi|256711599|gb|EEU26637.1| thymidylate synthase [Enterococcus faecalis T8]
 gi|295112995|emb|CBL31632.1| thymidylate synthase [Enterococcus sp. 7L76]
 gi|300850274|gb|EFK78024.1| thymidylate synthase [Enterococcus faecalis TUSoD Ef11]
 gi|306496979|gb|EFM66527.1| thymidylate synthase [Enterococcus faecalis TX0411]
 gi|315029370|gb|EFT41302.1| thymidylate synthase [Enterococcus faecalis TX4000]
 gi|315145054|gb|EFT89070.1| thymidylate synthase [Enterococcus faecalis TX2141]
 gi|315160429|gb|EFU04446.1| thymidylate synthase [Enterococcus faecalis TX0645]
          Length = 315

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|319941408|ref|ZP_08015736.1| thymidylate synthase [Sutterella wadsworthensis 3_1_45B]
 gi|319805028|gb|EFW01858.1| thymidylate synthase [Sutterella wadsworthensis 3_1_45B]
          Length = 266

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 151/263 (57%), Positives = 197/263 (74%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QY  LL+ + + G+ + DRTG GTRS FG QMRF L+ GFPL+TTKK+H +S+++ELLW
Sbjct: 4   NQYETLLKDIYERGAHKSDRTGTGTRSLFGCQMRFPLADGFPLVTTKKLHLRSIIYELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL G +N+ YLH H V+IWDEWAD++GELGP+YG QWR+WP  DG  IDQIS +++ ++ 
Sbjct: 64  FLSGSTNIKYLHDHKVTIWDEWADENGELGPVYGRQWRAWPTSDGRTIDQISEVLERIKK 123

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P SRR +V+AWN A +DKMALPPCHCLFQFYV +G+LSCQLYQRS D+FLG+PFNIASY
Sbjct: 124 NPDSRRLLVTAWNPAEVDKMALPPCHCLFQFYVADGRLSCQLYQRSCDMFLGVPFNIASY 183

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT M+A     + G+F+ T GD H+Y+NH EQ  LQLSR PR  P+++I      L  
Sbjct: 184 ALLTHMVAQQCDLEPGDFVWTGGDCHIYDNHLEQTALQLSREPRPYPKLVIKRRPASLFE 243

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + YEDF    Y+P   I A V+V
Sbjct: 244 YEYEDFEFEGYDPWPGIKAPVAV 266


>gi|313224867|emb|CBY20659.1| unnamed protein product [Oikopleura dioica]
          Length = 294

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 135/284 (47%), Positives = 184/284 (64%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLD+ R++I  G  + DRTG GTRS FG QMRF L+   FPLLTTKK   + +  ELL
Sbjct: 11  QQYLDICRNIIDNGHQKGDRTGTGTRSIFGGQMRFSLADNAFPLLTTKKTFLRGITEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------ 102
           WF+RG +N   L    V IWD                ++ +LGP+YG QWR +       
Sbjct: 71  WFIRGSTNAKELSDKKVRIWDANGSRAFLDSRGLHNREEWDLGPVYGFQWRHFGAKYGTM 130

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+  ++++++ +P  RR ++ AWN   +D+MALPPCHCL QFYV NGKLS
Sbjct: 131 HDDYTGKGVDQLQKVIETIKNNPNDRRMLMVAWNPVDLDEMALPPCHCLCQFYVANGKLS 190

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+L+T+M+A V   + G+F+HTLGD H+YNNH +Q + Q+
Sbjct: 191 CQLYQRSCDMGLGVPFNIASYALMTIMIAHVTNLEPGDFVHTLGDAHVYNNHIDQLEEQI 250

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +R PR  P+M I   + D+ +F+ EDF L  YEP+ AI   ++V
Sbjct: 251 ARVPRKFPKMKITRKVEDIENFKMEDFELSEYEPYPAIKMPMAV 294


>gi|300113048|ref|YP_003759623.1| thymidylate synthase [Nitrosococcus watsonii C-113]
 gi|299538985|gb|ADJ27302.1| thymidylate synthase [Nitrosococcus watsonii C-113]
          Length = 264

 Score =  361 bits (928), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 156/264 (59%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  G ++ DRTG GT S FG+QMRFDL +GFPL+TT+K+H +S+  ELL
Sbjct: 1   MKPYLDLIQKILATGVEQDDRTGTGTWSIFGHQMRFDLRQGFPLVTTRKLHVRSIFIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP  DG  +DQ++ +   +R
Sbjct: 61  WFLRGETNVKYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGGYLDQMAKVSTQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P+SRRHIV A+N A +D+MALPPCH LFQFYV  G+LSCQLYQRS DVFLG PFNIAS
Sbjct: 121 HYPHSRRHIVVAYNPACVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGTPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT ++A   G   GEFI T GDVHLY NH E A LQL+R P  LP++ I      L 
Sbjct: 181 YALLTHLMAQQCGLGVGEFIWTGGDVHLYRNHLEAARLQLTREPLPLPRLQIKRRPSSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++Y+D  +  Y+ + AI A VSV
Sbjct: 241 EYQYDDLEIVDYQSYPAIKAAVSV 264


>gi|13096424|pdb|1HW3|A Chain A, Structure Of Human Thymidylate Synthase Suggests
           Advantages Of Chemotherapy With Noncompetitive
           Inhibitors
 gi|66361120|pdb|1YPV|A Chain A, Structure Of Human Thymidylate Synthase At Low Salt
           Conditions
 gi|146387619|pdb|2ONB|A Chain A, Human Thymidylate Synthase At Low Salt Conditions With
           Pdpa Bound
          Length = 313

 Score =  361 bits (927), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPP H L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMALPPXHALXQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|163745997|ref|ZP_02153356.1| Thymidylate synthase [Oceanibulbus indolifex HEL-45]
 gi|161380742|gb|EDQ05152.1| Thymidylate synthase [Oceanibulbus indolifex HEL-45]
          Length = 277

 Score =  361 bits (927), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 149/277 (53%), Positives = 196/277 (70%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY D LR V+  G    DRTG GT S FG Q R+ ++ GFPL+TTKK+H KS+VHELL
Sbjct: 1   MKQYHDALREVLDQGVTSTDRTGTGTISHFGMQQRYRMADGFPLVTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-------------YDGN 107
           WFL GD+N++YL ++GVSIW+EWAD+DG+LGP+YG QWR +P              +   
Sbjct: 61  WFLAGDTNIAYLRQNGVSIWNEWADEDGDLGPVYGHQWRRFPMVGEPMPQPDGTVLHRAG 120

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQI+ +V ++RA P SRR IVSAWN   +D+MALPPCH L+Q  +  GKL  QLYQRS
Sbjct: 121 QVDQIAKLVDAIRATPDSRRLIVSAWNPGEVDQMALPPCHTLWQVRIAGGKLHLQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LL  MLA V G+  G+F+H++GD H+Y+NH EQ   QL+R+P+ L
Sbjct: 181 ADMFLGVPFNIASYALLLEMLAHVTGYAPGDFVHSMGDAHIYSNHVEQVQTQLARTPKAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ IN  +  +  FRYEDFT   Y+P+ AI A V+V
Sbjct: 241 PKLRINRKVSSIFDFRYEDFTFDGYDPNPAIKAPVAV 277


>gi|195342137|ref|XP_002037658.1| GM18183 [Drosophila sechellia]
 gi|194132508|gb|EDW54076.1| GM18183 [Drosophila sechellia]
          Length = 321

 Score =  361 bits (927), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 140/286 (48%), Positives = 183/286 (63%), Gaps = 23/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+ YLDLLRH+I  G  R DRT VGT S FG QMRFD+   FPLLTTK+V +++V  ELL
Sbjct: 37  MN-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+ G ++   L    V IWD  + ++            G+LGP+YG QWR +       
Sbjct: 96  WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRVVGDLGPVYGFQWRHFGAQYGTC 155

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158
             +Y G  IDQ+  ++ ++R  P  RR I+SAWN   I KMALPPCHCL QFYV    G+
Sbjct: 156 DDNYSGKGIDQLRQVIDTIRNKPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGE 215

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    
Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R+PR  P++II   + D+  FR+EDF +  Y PH  I  +++V
Sbjct: 276 QLQRTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPHPKIKMEMAV 321


>gi|222617018|gb|EEE53150.1| hypothetical protein OsJ_35972 [Oryza sativa Japonica Group]
          Length = 521

 Score =  361 bits (927), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L + FPLLTTK+V W+ V+ ELLW
Sbjct: 239 YQYLNLVQDIIRNGAKKNDRTGTGTVSKFGCQMRFNLRRNFPLLTTKRVFWRGVLEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G +N   L   G+ IWD  A             ++G+LGP+YG QWR +        
Sbjct: 299 FISGSTNAKVLQEKGIHIWDGNASRQYLDSIGLTQREEGDLGPVYGFQWRHFGAEYTDMH 358

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN   + KMALPPCH   QFYV+NG+LSC
Sbjct: 359 ADYVGKGFDQLMDVIDKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     G+F+H +GD H+Y  H E  + Q+ 
Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGDFVHVIGDAHVYRTHVEALEEQMR 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP   D+ SF   DF L  Y+PH  I  K++V
Sbjct: 479 KQPKPFPILKINPVKKDIDSFVTSDFKLVRYDPHHKIEMKMAV 521


>gi|327332419|gb|EGE74155.1| thymidylate synthase [Propionibacterium acnes HL097PA1]
          Length = 270

 Score =  361 bits (926), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 160/270 (59%), Positives = 200/270 (74%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG  IDQI+ +V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDGGTIDQIAKVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV          LSCQLYQRSGD FLG+
Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270


>gi|118497833|ref|YP_898883.1| thymidylate synthase [Francisella tularensis subsp. novicida U112]
 gi|134301752|ref|YP_001121720.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|187931486|ref|YP_001891470.1| thymidylate synthase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|194323806|ref|ZP_03057582.1| thymidylate synthase [Francisella tularensis subsp. novicida FTE]
 gi|208779897|ref|ZP_03247241.1| thymidylate synthase [Francisella novicida FTG]
 gi|254373190|ref|ZP_04988679.1| thymidylate synthase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254374644|ref|ZP_04990125.1| thymidylate synthase [Francisella novicida GA99-3548]
 gi|166231701|sp|A0Q7B4|TYSY_FRATN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231702|sp|A4IXE8|TYSY_FRATW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|118423739|gb|ABK90129.1| thymidylate synthase [Francisella novicida U112]
 gi|134049529|gb|ABO46600.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|151570917|gb|EDN36571.1| thymidylate synthase [Francisella novicida GA99-3549]
 gi|151572363|gb|EDN38017.1| thymidylate synthase [Francisella novicida GA99-3548]
 gi|187712395|gb|ACD30692.1| thymidylate synthase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|194322170|gb|EDX19652.1| thymidylate synthase [Francisella tularensis subsp. novicida FTE]
 gi|208744352|gb|EDZ90652.1| thymidylate synthase [Francisella novicida FTG]
 gi|332678547|gb|AEE87676.1| Thymidylate synthase [Francisella cf. novicida Fx1]
          Length = 274

 Score =  361 bits (926), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 150/277 (54%), Positives = 186/277 (67%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++ + G  + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLKYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL+ + V IW+EWA  DGELGPIYG QWR +   +G  IDQI+ ++Q L+
Sbjct: 61  WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWRDF---NGQGIDQIADVIQMLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN  ++                ALPPCH +FQFYV N KLSC L QRS
Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF   +Y  H AI AK+SV
Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274


>gi|257867789|ref|ZP_05647442.1| thymidylate synthase [Enterococcus casseliflavus EC30]
 gi|257874116|ref|ZP_05653769.1| thymidylate synthase [Enterococcus casseliflavus EC10]
 gi|257801872|gb|EEV30775.1| thymidylate synthase [Enterococcus casseliflavus EC30]
 gi|257808280|gb|EEV37102.1| thymidylate synthase [Enterococcus casseliflavus EC10]
          Length = 315

 Score =  361 bits (926), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 149/315 (47%), Positives = 186/315 (59%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL R ++  G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V +  +  EL
Sbjct: 1   MEQAYLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86
           LWFL+GD+N+ YL  H   IWDEWA +                                 
Sbjct: 61  LWFLKGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHE 120

Query: 87  -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                             G+LG +YG QWR W    G  IDQI  ++  ++  P SRR I
Sbjct: 121 LKLFCEKILADDAFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIDMIKTTPDSRRLI 180

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV  G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A
Sbjct: 181 VSAWNPEDVPTMALPPCHTMFQFYVHKGRLSCQLYQRSADVFLGVPFNIASYALLTHLIA 240

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G + G+F+HTLGD HLY+NH EQ   QL+RS R  P + +NP    +  F  ED TL
Sbjct: 241 HETGLEVGDFVHTLGDAHLYSNHMEQMKEQLTRSVRPAPTLQLNPEKQSIFDFEMEDITL 300

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I A ++V
Sbjct: 301 AGYDPHPTIKAPIAV 315


>gi|56708291|ref|YP_170187.1| thymidylate synthase [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110670762|ref|YP_667319.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457413|ref|ZP_03665886.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370775|ref|ZP_04986780.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875112|ref|ZP_05247822.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|62901196|sp|Q5NFK5|TYSY_FRATT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123063432|sp|Q14H07|TYSY_FRAT1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54113189|gb|AAV29228.1| NT02FT1259 [synthetic construct]
 gi|56604783|emb|CAG45862.1| thymidylate synthase [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110321095|emb|CAL09245.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569018|gb|EDN34672.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254841111|gb|EET19547.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159521|gb|ADA78912.1| thymidylate synthase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 274

 Score =  361 bits (926), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 150/277 (54%), Positives = 186/277 (67%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++ + G  + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H  SVVHELL
Sbjct: 1   MQEYLNFLKYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL+ + V IW+EWA  DGELGPIYG QWR +   +G  IDQI+ ++Q L+
Sbjct: 61  WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWRDF---NGQGIDQIADVIQMLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN  ++                ALPPCH +FQFYV N KLSC L QRS
Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTNMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF   +Y  H AI AK+SV
Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274


>gi|18859519|ref|NP_571835.1| thymidylate synthase [Danio rerio]
 gi|9795378|gb|AAF97476.1| thymidylate synthase [Danio rerio]
          Length = 319

 Score =  361 bits (926), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 126/281 (44%), Positives = 175/281 (62%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+  +++ G+ + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 39  YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
           +G +N   L   GV IWD                ++G+LGP+YG QWR +         D
Sbjct: 99  KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 158

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++ +++++P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQL
Sbjct: 159 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 218

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E    Q+ R 
Sbjct: 219 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 278

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR  P++ I   +  +  F  EDF +  Y+PH  I  +++V
Sbjct: 279 PRPFPKLRIKRKVEQINDFCAEDFEIYDYDPHPTIKMQMAV 319


>gi|257876680|ref|ZP_05656333.1| thymidylate synthase [Enterococcus casseliflavus EC20]
 gi|257810846|gb|EEV39666.1| thymidylate synthase [Enterococcus casseliflavus EC20]
          Length = 315

 Score =  360 bits (925), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 149/315 (47%), Positives = 186/315 (59%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL R ++  G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V +  +  EL
Sbjct: 1   MEQAYLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86
           LWFL+GD+N+ YL  H   IWDEWA +                                 
Sbjct: 61  LWFLKGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHE 120

Query: 87  -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                             G+LG +YG QWR W    G  IDQI  ++  ++  P SRR I
Sbjct: 121 LKLFCEKILADDAFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIDMIKTTPDSRRLI 180

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV  G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A
Sbjct: 181 VSAWNPEDVPTMALPPCHTMFQFYVHEGRLSCQLYQRSADVFLGVPFNIASYALLTHLIA 240

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G + G+F+HTLGD HLY+NH EQ   QL+RS R  P + +NP    +  F  ED TL
Sbjct: 241 HETGLEVGDFVHTLGDAHLYSNHMEQMKEQLTRSVRPAPTLQLNPEKQSIFDFEMEDITL 300

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I A ++V
Sbjct: 301 AGYDPHPTIKAPIAV 315


>gi|256032568|pdb|3EGY|X Chain X, Crystal Structure Of Human Thymidyalte Synthase A191k With
           Loop 181-197 Stabilized In The Inactive Conformation
          Length = 313

 Score =  360 bits (925), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 129/282 (45%), Positives = 174/282 (61%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRXGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  M LPP H L QFYV N +LSCQ
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMXAWNPRDLPLMKLPPXHALXQFYVVNSELSCQ 211

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 212 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 271

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 272 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 313


>gi|224283792|ref|ZP_03647114.1| thymidylate synthase [Bifidobacterium bifidum NCIMB 41171]
          Length = 256

 Score =  360 bits (925), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 145/255 (56%), Positives = 182/255 (71%), Gaps = 5/255 (1%)

Query: 14  FGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLH 73
            G+ + DRTG GT S FG QMRFDLS+GFPLLTTK V +K + +ELLWFL+G SNV +L 
Sbjct: 3   EGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFLKGSSNVRWLQ 62

Query: 74  RHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----GNVIDQISSIVQSLRADPYSRRHI 129
            H V IWD+WAD++G+LGP+YGVQWRSWP          IDQI +++  +R  P SRR +
Sbjct: 63  EHNVHIWDDWADENGDLGPVYGVQWRSWPAPTSEDPNRTIDQIGNVLDLIRNHPDSRRMV 122

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN A ++ MALPPCH LFQFYV +G+LSCQLYQRS D+F+G+PFNIASYSLLTMM+A
Sbjct: 123 VSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIASYSLLTMMIA 182

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G + GEF+ T GD H+Y+NH +Q   QLSR P   P++ I      L  ++YEDFT+
Sbjct: 183 QQTGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEI-RKADSLFDYQYEDFTI 241

Query: 250 RSYEPHAAILAKVSV 264
             Y  H  I A V+V
Sbjct: 242 VDYRHHPTIKAPVAV 256


>gi|257086729|ref|ZP_05581090.1| thymidylate synthase [Enterococcus faecalis D6]
 gi|256994759|gb|EEU82061.1| thymidylate synthase [Enterococcus faecalis D6]
 gi|315027251|gb|EFT39183.1| thymidylate synthase [Enterococcus faecalis TX2137]
          Length = 315

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|256958995|ref|ZP_05563166.1| thymidylate synthase [Enterococcus faecalis DS5]
 gi|256949491|gb|EEU66123.1| thymidylate synthase [Enterococcus faecalis DS5]
          Length = 315

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH  FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTTFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|289427821|ref|ZP_06429530.1| thymidylate synthase [Propionibacterium acnes J165]
 gi|295131194|ref|YP_003581857.1| thymidylate synthase [Propionibacterium acnes SK137]
 gi|289159003|gb|EFD07198.1| thymidylate synthase [Propionibacterium acnes J165]
 gi|291375426|gb|ADD99280.1| thymidylate synthase [Propionibacterium acnes SK137]
 gi|313773259|gb|EFS39225.1| thymidylate synthase [Propionibacterium acnes HL074PA1]
 gi|313793458|gb|EFS41509.1| thymidylate synthase [Propionibacterium acnes HL110PA1]
 gi|313801143|gb|EFS42406.1| thymidylate synthase [Propionibacterium acnes HL110PA2]
 gi|313812065|gb|EFS49779.1| thymidylate synthase [Propionibacterium acnes HL083PA1]
 gi|313819227|gb|EFS56941.1| thymidylate synthase [Propionibacterium acnes HL046PA2]
 gi|313821101|gb|EFS58815.1| thymidylate synthase [Propionibacterium acnes HL036PA1]
 gi|313823473|gb|EFS61187.1| thymidylate synthase [Propionibacterium acnes HL036PA2]
 gi|313827024|gb|EFS64738.1| thymidylate synthase [Propionibacterium acnes HL063PA1]
 gi|313829862|gb|EFS67576.1| thymidylate synthase [Propionibacterium acnes HL007PA1]
 gi|313834704|gb|EFS72418.1| thymidylate synthase [Propionibacterium acnes HL056PA1]
 gi|313837927|gb|EFS75641.1| thymidylate synthase [Propionibacterium acnes HL086PA1]
 gi|314925914|gb|EFS89745.1| thymidylate synthase [Propionibacterium acnes HL036PA3]
 gi|314960889|gb|EFT04990.1| thymidylate synthase [Propionibacterium acnes HL002PA2]
 gi|314963347|gb|EFT07447.1| thymidylate synthase [Propionibacterium acnes HL082PA1]
 gi|314974024|gb|EFT18120.1| thymidylate synthase [Propionibacterium acnes HL053PA1]
 gi|314975450|gb|EFT19545.1| thymidylate synthase [Propionibacterium acnes HL045PA1]
 gi|314979451|gb|EFT23545.1| thymidylate synthase [Propionibacterium acnes HL072PA2]
 gi|314984210|gb|EFT28302.1| thymidylate synthase [Propionibacterium acnes HL005PA1]
 gi|314988435|gb|EFT32526.1| thymidylate synthase [Propionibacterium acnes HL005PA2]
 gi|314988646|gb|EFT32737.1| thymidylate synthase [Propionibacterium acnes HL005PA3]
 gi|315079373|gb|EFT51371.1| thymidylate synthase [Propionibacterium acnes HL053PA2]
 gi|315079992|gb|EFT51968.1| thymidylate synthase [Propionibacterium acnes HL078PA1]
 gi|315083399|gb|EFT55375.1| thymidylate synthase [Propionibacterium acnes HL027PA2]
 gi|315086806|gb|EFT58782.1| thymidylate synthase [Propionibacterium acnes HL002PA3]
 gi|315089453|gb|EFT61429.1| thymidylate synthase [Propionibacterium acnes HL072PA1]
 gi|315097776|gb|EFT69752.1| thymidylate synthase [Propionibacterium acnes HL038PA1]
 gi|327325399|gb|EGE67204.1| thymidylate synthase [Propionibacterium acnes HL096PA2]
 gi|327328262|gb|EGE70026.1| thymidylate synthase [Propionibacterium acnes HL096PA3]
 gi|327443692|gb|EGE90346.1| thymidylate synthase [Propionibacterium acnes HL043PA1]
 gi|327449229|gb|EGE95883.1| thymidylate synthase [Propionibacterium acnes HL043PA2]
 gi|327450177|gb|EGE96831.1| thymidylate synthase [Propionibacterium acnes HL013PA2]
 gi|327451241|gb|EGE97895.1| thymidylate synthase [Propionibacterium acnes HL092PA1]
 gi|328756767|gb|EGF70383.1| thymidylate synthase [Propionibacterium acnes HL020PA1]
 gi|328761041|gb|EGF74593.1| thymidylate synthase [Propionibacterium acnes HL099PA1]
 gi|332676071|gb|AEE72887.1| thymidylate synthase [Propionibacterium acnes 266]
          Length = 270

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+ +V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV          LSCQLYQRSGD FLG+
Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270


>gi|148244715|ref|YP_001219409.1| thymidylate synthase [Candidatus Vesicomyosocius okutanii HA]
 gi|166231742|sp|A5CWK3|TYSY_VESOH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|146326542|dbj|BAF61685.1| thymidylate synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 264

 Score =  360 bits (924), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 148/264 (56%), Positives = 190/264 (71%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L+ V   G  + DRT  GT S FGYQMRFDLSKGFPL+TTK VH  SVV+ELL
Sbjct: 1   MKQYLDFLKLVKNIGVYKTDRTNTGTTSMFGYQMRFDLSKGFPLVTTKHVHLPSVVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GV IW+EWAD++G+LGP+YG QWR W +     IDQIS +V+ ++
Sbjct: 61  WFLNGDTNIKYLQDNGVRIWNEWADENGDLGPVYGTQWRHWKNIKDKSIDQISKVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWNV  ++ MALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 NTPNSRRIIVSAWNVGELENMALPPCHVFFQFYVADGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A     + G+FI + GD H+Y+NH++Q ++QLSR+P+ L  + I     ++ 
Sbjct: 181 YSLLTHMMAQQCDLEVGDFIWSGGDCHIYSNHYKQVEIQLSRTPKALATLKIKRKPENIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF   +Y   A I A V++
Sbjct: 241 DYSFEDFEFVNYIFDAPIKAPVAI 264


>gi|29124532|gb|AAH49026.1| Tyms protein [Danio rerio]
          Length = 319

 Score =  360 bits (924), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 126/281 (44%), Positives = 175/281 (62%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+  +++ G+ + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 39  YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
           +G +N   L   GV IWD                ++G+LGP+YG QWR +         D
Sbjct: 99  KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 158

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++ +++++P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQL
Sbjct: 159 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 218

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E    Q+ R 
Sbjct: 219 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 278

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR  P++ I   +  +  F  EDF +  Y+PH  I  +++V
Sbjct: 279 PRPFPKLRIKRKVEQINDFCAEDFEIYDYDPHPTIKMQMAV 319


>gi|307271003|ref|ZP_07552286.1| thymidylate synthase [Enterococcus faecalis TX4248]
 gi|307289121|ref|ZP_07569077.1| thymidylate synthase [Enterococcus faecalis TX0109]
 gi|306499830|gb|EFM69191.1| thymidylate synthase [Enterococcus faecalis TX0109]
 gi|306512501|gb|EFM81150.1| thymidylate synthase [Enterococcus faecalis TX4248]
 gi|315036993|gb|EFT48925.1| thymidylate synthase [Enterococcus faecalis TX0027]
 gi|315164030|gb|EFU08047.1| thymidylate synthase [Enterococcus faecalis TX1302]
 gi|323480739|gb|ADX80178.1| thymidylate synthase [Enterococcus faecalis 62]
          Length = 315

 Score =  360 bits (924), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|294790621|ref|ZP_06755779.1| thymidylate synthase [Scardovia inopinata F0304]
 gi|294458518|gb|EFG26871.1| thymidylate synthase [Scardovia inopinata F0304]
          Length = 290

 Score =  360 bits (924), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 148/265 (55%), Positives = 187/265 (70%), Gaps = 5/265 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL+R +++ GS + DRTG GT S FG QMRF+L   FPLLTTK V ++ + +ELLWFL
Sbjct: 27  YEDLVRLILETGSLKSDRTGTGTISLFGRQMRFNLEDSFPLLTTKTVFFRGIAYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQSL 119
           +G SNV +L  + V IWDEWAD DG LGP+YGVQWRSWP    D     IDQIS+++  +
Sbjct: 87  KGSSNVRWLQENRVHIWDEWADADGNLGPVYGVQWRSWPAPTADNPNRTIDQISTVLNLI 146

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           +  P SRR IVSAWN A ++ MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIA
Sbjct: 147 KNQPDSRRMIVSAWNPAEVENMALPPCHTLFQFYVADGKLSCQLYQRSADMFLGVPFNIA 206

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYSLLT M+A     + GEF+ T GD H+Y+NH +Q   QLSR P   PQ+ I+     +
Sbjct: 207 SYSLLTAMMAQQADLKPGEFVWTGGDCHIYDNHVDQVLEQLSRQPYPYPQLKID-KADTI 265

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++YEDF + +Y+ H  I A V+V
Sbjct: 266 FDYKYEDFHILNYQHHPKITAPVAV 290


>gi|110808211|sp|Q2QRX6|DRTS_ORYSJ RecName: Full=Putative bifunctional dihydrofolate
           reductase-thymidylate synthase; Short=DHFR-TS; Includes:
           RecName: Full=Dihydrofolate reductase; Includes:
           RecName: Full=Thymidylate synthase
 gi|108862630|gb|ABA98037.2| Bifunctional dihydrofolate reductase-thymidylate synthase,
           putative, expressed [Oryza sativa Japonica Group]
 gi|215769248|dbj|BAH01477.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186783|gb|EEC69210.1| hypothetical protein OsI_38205 [Oryza sativa Indica Group]
          Length = 494

 Score =  360 bits (924), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L + FPLLTTK+V W+ V+ ELLW
Sbjct: 212 YQYLNLVQDIIRNGAKKNDRTGTGTVSKFGCQMRFNLRRNFPLLTTKRVFWRGVLEELLW 271

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G +N   L   G+ IWD  A             ++G+LGP+YG QWR +        
Sbjct: 272 FISGSTNAKVLQEKGIHIWDGNASRQYLDSIGLTQREEGDLGPVYGFQWRHFGAEYTDMH 331

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN   + KMALPPCH   QFYV+NG+LSC
Sbjct: 332 ADYVGKGFDQLMDVIDKIKNNPDDRRIILSAWNPTDLKKMALPPCHMFAQFYVENGELSC 391

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V     G+F+H +GD H+Y  H E  + Q+ 
Sbjct: 392 QMYQRSADMGLGVPFNIASYSLLTCMIAQVCDLSPGDFVHVIGDAHVYRTHVEALEEQMR 451

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + P+  P + INP   D+ SF   DF L  Y+PH  I  K++V
Sbjct: 452 KQPKPFPILKINPVKKDIDSFVTSDFKLVRYDPHHKIEMKMAV 494


>gi|255324809|ref|ZP_05365922.1| thymidylate synthase [Corynebacterium tuberculostearicum SK141]
 gi|255298109|gb|EET77413.1| thymidylate synthase [Corynebacterium tuberculostearicum SK141]
          Length = 267

 Score =  360 bits (924), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 147/261 (56%), Positives = 192/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL+ V++ G+ + DRTG GTRS FG Q+R++L++ FPLLTTKKV++ +V+ ELLWFL
Sbjct: 8   YEDLLKKVLETGTPKGDRTGTGTRSIFGAQLRYNLAESFPLLTTKKVYFHAVLGELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G+SN+ +L  + V IW+EWAD +GELGP+YGVQWRSWP  DG  IDQI   + +L  +P
Sbjct: 68  KGESNIKFLQDNKVRIWNEWADDNGELGPVYGVQWRSWPTPDGQHIDQIQQALDTLNNNP 127

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR++VSAWNVA +DKMAL PCH LFQ YV +G LS Q+YQRS D+FLG+PFNIASY+ 
Sbjct: 128 DSRRNLVSAWNVADLDKMALMPCHLLFQLYVADGTLSMQVYQRSADMFLGVPFNIASYAA 187

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M A   G + GE I T GD H+YN+H EQ   QLSR PR  PQ+ ++    D+ S+ 
Sbjct: 188 LTHMFAQQAGLKVGELIWTGGDCHIYNDHVEQVKEQLSREPRPYPQLNLH-KAEDMFSYD 246

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + DF +  Y+PH  I A+VSV
Sbjct: 247 FADFEIEGYDPHPTIKAQVSV 267


>gi|241106587|ref|XP_002410061.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
 gi|215492873|gb|EEC02514.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
          Length = 301

 Score =  360 bits (924), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 137/284 (48%), Positives = 182/284 (64%), Gaps = 25/284 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLD L H++K G  + DRTG GT S FG Q R+ L+ G  PLLTTK+V W+ VV ELL
Sbjct: 22  YQYLDTLAHILKNGRQKGDRTGTGTISIFGAQCRYSLADGTMPLLTTKRVFWRGVVEELL 81

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG +N   L   GV IWD                ++G+LGP+YG QWR +       
Sbjct: 82  WFLRGSTNAKELSERGVRIWDGNGSRQFLDSLGFVDREEGDLGPVYGFQWRHFGAPYRTM 141

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    +DQI +++++++ +P  RR I+ +WN A + KMALPPCHCL QFYV   +LS
Sbjct: 142 RTDYGDEGVDQIKNLIETIKTNPNDRRMILCSWNPADLGKMALPPCHCLAQFYVYEDELS 201

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+Y NH +     L
Sbjct: 202 CQLYQRSADMGLGVPFNIASYALLTHMVAKVTGKRPGDFVHTLGDAHIYLNHVDA----L 257

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I  ++ D+  FR+EDF +  Y PH AI  ++SV
Sbjct: 258 EREPRPFPKLHIKRDVKDIFDFRFEDFEIVDYHPHPAIKMEMSV 301


>gi|41351139|gb|AAH65845.1| Tyms protein [Danio rerio]
          Length = 318

 Score =  360 bits (924), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 126/281 (44%), Positives = 174/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+  +++ G+ + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 38  YLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRDQFPLLTTKRVFWKGILEELLWFI 97

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
           +G +N   L   GV IWD                ++G+LGP+YG QWR +         D
Sbjct: 98  KGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTD 157

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++ +++++P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQL
Sbjct: 158 YSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYVSNGELSCQL 217

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E    Q+ R 
Sbjct: 218 YQRSGDIGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYTNHIEPLKEQIQRE 277

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR  P++ I   +  +  F  EDF +  Y PH  I  +++V
Sbjct: 278 PRPFPKLRIKRKVEQINDFCAEDFEIYDYNPHPTIKMQMAV 318


>gi|256832262|ref|YP_003160989.1| thymidylate synthase [Jonesia denitrificans DSM 20603]
 gi|256685793|gb|ACV08686.1| thymidylate synthase [Jonesia denitrificans DSM 20603]
          Length = 266

 Score =  359 bits (923), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 154/261 (59%), Positives = 190/261 (72%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL   ++ G+ + DRTG GT S FG+QMRFDL +GFPL+TTKKVH KSVV ELLWFL
Sbjct: 7   YEDLLALTLQHGTPKNDRTGTGTTSIFGHQMRFDLREGFPLITTKKVHLKSVVGELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG+SNV +L  HG+ IW+EWAD  GELGP+YGVQWRSWP  DG+ IDQ+S +V +LR DP
Sbjct: 67  RGESNVQWLQDHGIRIWNEWADARGELGPVYGVQWRSWPTPDGHHIDQLSQVVDTLRTDP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ + KMAL PCH  FQFYV +G LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRMLVSAWNVSELHKMALAPCHAFFQFYVADGTLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A       GEFI T GD H+Y+NH  Q + QL+R  R  P++ +N     L  + 
Sbjct: 187 LTHMVAQQTDLAVGEFIWTGGDCHIYDNHRSQVNEQLTRDVRPFPRLELNRA-DSLFDYC 245

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           ++D  +  YEPH  I A V+V
Sbjct: 246 FDDVVVHDYEPHPTIRASVAV 266


>gi|332185611|ref|ZP_08387359.1| thymidylate synthase [Sphingomonas sp. S17]
 gi|332014589|gb|EGI56646.1| thymidylate synthase [Sphingomonas sp. S17]
          Length = 264

 Score =  359 bits (923), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 149/264 (56%), Positives = 183/264 (69%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G  + DRTG GT S FG+QMRFDL++GFP+LTTKK+H +S++ ELL
Sbjct: 1   MRQYLDLMDRVLTQGVQQMDRTGTGTLSVFGHQMRFDLAQGFPVLTTKKLHLRSIIVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L    VSIWDEWAD+ G+LGP+YG QWR W   DG  IDQI+ +++ +R
Sbjct: 61  WFLRGDTNVRWLQEQKVSIWDEWADEAGDLGPVYGKQWRDWATADGRHIDQIAELIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN   +  MAL PCHCLFQ +V NG+LS QLYQRS D+FLG+PFNIAS
Sbjct: 121 TQPASRRQIVSAWNPGDLHAMALAPCHCLFQTHVANGRLSLQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT MLA     + GEFI T GD HLY NH EQA  QL R P  LP++ I      + 
Sbjct: 181 YALLTHMLAQQCDLEVGEFIWTGGDCHLYLNHLEQARTQLGREPGALPRLEITRKPDAID 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +  EDF L  Y     I A V++
Sbjct: 241 GYALEDFVLHDYVAQRHIKAVVAI 264


>gi|325571013|ref|ZP_08146585.1| thymidylate synthase [Enterococcus casseliflavus ATCC 12755]
 gi|325156098|gb|EGC68284.1| thymidylate synthase [Enterococcus casseliflavus ATCC 12755]
          Length = 315

 Score =  359 bits (923), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 150/315 (47%), Positives = 188/315 (59%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL R ++  G+D+ DRTG GTRS FG+QMRFDLS+GFPLLTTK+V +  +  EL
Sbjct: 1   MEQAYLDLGRKILAEGNDKSDRTGTGTRSVFGHQMRFDLSQGFPLLTTKRVPFGLIKSEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86
           LWFL+GD+N+ YL  H   IWDEWA +                                 
Sbjct: 61  LWFLKGDTNIRYLLEHNNHIWDEWAFERYIKSDAYTGPDMTDFGRRSLVDEAFNEQYQHE 120

Query: 87  -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                             G+LG +YG QWR W    G  IDQI  +++ ++  P SRR I
Sbjct: 121 LKQFCEKILSDDTFAETFGDLGHVYGYQWRHWEKSTGGFIDQIKEVIEMIKTTPDSRRLI 180

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV +G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A
Sbjct: 181 VSAWNPEDVPTMALPPCHTMFQFYVHDGRLSCQLYQRSADVFLGVPFNIASYALLTHLIA 240

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G + G+FIHTLGD HLY+NH EQ   QL+RS R  P + +NP    +  F  ED TL
Sbjct: 241 HETGLEVGDFIHTLGDAHLYSNHIEQMKEQLTRSVRPAPSLQLNPEKQSIFDFEMEDITL 300

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I A ++V
Sbjct: 301 AGYDPHPTIKAPIAV 315


>gi|255975838|ref|ZP_05426424.1| thymidylate synthase [Enterococcus faecalis T2]
 gi|307278059|ref|ZP_07559143.1| thymidylate synthase [Enterococcus faecalis TX0860]
 gi|255968710|gb|EET99332.1| thymidylate synthase [Enterococcus faecalis T2]
 gi|306505456|gb|EFM74642.1| thymidylate synthase [Enterococcus faecalis TX0860]
          Length = 315

 Score =  359 bits (923), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 187/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLTKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K GELG IYG QWR W   DG+ IDQ++++++ ++ +P SRR IVSAW
Sbjct: 125 CDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+
Sbjct: 245 LAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYD 304

Query: 254 PHAAILAKVSV 264
           PH  I A ++V
Sbjct: 305 PHPTIKAPIAV 315


>gi|321468779|gb|EFX79762.1| hypothetical protein DAPPUDRAFT_304293 [Daphnia pulex]
          Length = 292

 Score =  359 bits (922), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 137/284 (48%), Positives = 186/284 (65%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL+L++++++ G+ + DRTG GTRS FG QMRF L  G FPLLTTK+V W+ ++ ELL
Sbjct: 9   HQYLNLIKNLLQNGNVKGDRTGTGTRSIFGAQMRFSLRSGRFPLLTTKRVFWRGLMEELL 68

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF+RG +N + L    + IWD  +             ++G+LGPIYG QWR +       
Sbjct: 69  WFVRGSTNANELREKDIHIWDGNSSREFLDSLGLKDREEGDLGPIYGFQWRHFGANYDNM 128

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    +DQ+ +++ ++R +P  RR I++AWN + +  MALPPCHCL QFYV NG+LS
Sbjct: 129 HSDYSCQGVDQLKNLINTIRTNPDDRRMILTAWNPSALPLMALPPCHCLAQFYVANGELS 188

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFNIASYSLLT M+A V G   GEFIHTLGD H+YNNH    + QL
Sbjct: 189 CQMYQRSADMGLGVPFNIASYSLLTCMIAHVTGLNPGEFIHTLGDAHVYNNHISALEKQL 248

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P + I   + D+  F+ +DF L  Y+PH  I   ++V
Sbjct: 249 ERQPRPFPTLKIIRKVSDIDDFKADDFVLEGYDPHPKIPMDMAV 292


>gi|254369108|ref|ZP_04985120.1| hypothetical protein FTAG_00039 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122058|gb|EDO66198.1| hypothetical protein FTAG_00039 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 274

 Score =  359 bits (922), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 149/277 (53%), Positives = 185/277 (66%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++ + G  + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLKYIKENGVLKNDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL+ + V IW+EWA  DGELGPIYG QWR +   +G  IDQI+ ++Q L+
Sbjct: 61  WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWRDF---NGQGIDQIADVIQMLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +V AWN  ++                ALPPCH +FQFYV N KLSC L QRS
Sbjct: 118 TNPNSRRILVLAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF   +Y  H AI AK+SV
Sbjct: 238 PTLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274


>gi|313808492|gb|EFS46957.1| thymidylate synthase [Propionibacterium acnes HL087PA2]
          Length = 270

 Score =  359 bits (922), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+ +V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNSIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV          LSCQLYQRSGD FLG+
Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270


>gi|241668230|ref|ZP_04755808.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254876765|ref|ZP_05249475.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842786|gb|EET21200.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 274

 Score =  359 bits (921), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 146/277 (52%), Positives = 189/277 (68%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++   G+++ DRTG GT S FGYQMRFDL +GFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLKYIKDNGTNKGDRTGTGTTSIFGYQMRFDLQQGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +NV YL+ + V IW+EWA ++GELGPIYG QWR +   +G  IDQI+ +++ L+
Sbjct: 61  WFLSGSTNVKYLNDNKVRIWNEWATEEGELGPIYGKQWRDF---NGEGIDQIAEVIEMLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN  ++                ALPPCH +FQFYV + KLSC L QRS
Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVAKGNSALPPCHAMFQFYVADNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMIAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF  ++Y+ H AI AK+SV
Sbjct: 238 PTLKILRKPSSIFDYKYEDFEFQNYKHHPAIKAKISV 274


>gi|317420036|emb|CBN82072.1| Thymidylate synthase [Dicentrarchus labrax]
          Length = 325

 Score =  359 bits (921), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 127/281 (45%), Positives = 175/281 (62%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLD + ++++ G  + DRTG G  S FG Q R++L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 45  YLDQIEYIMEHGRRKGDRTGTGVVSVFGTQARYNLRDQFPLLTTKRVFWKGILEELLWFI 104

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103
           +G +N   L   GV IWD    +D            G+LGP+YG QWR +         D
Sbjct: 105 KGSTNAKELSAKGVKIWDANGSRDFLDNLGFTDREEGDLGPVYGFQWRHFGAEYTNMHAD 164

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV + +LSCQL
Sbjct: 165 YTGQGVDQLQKVIDTIKKNPEDRRIIMCAWNPKDMPNMALPPCHALCQFYVCDSELSCQL 224

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R 
Sbjct: 225 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYINHIEPLKVQLQRE 284

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R  P++ I   +  +  FR EDF +  Y PH AI  +++V
Sbjct: 285 IRPFPKLKILRKVESIDDFRAEDFEICDYNPHPAIKMQMAV 325


>gi|302797080|ref|XP_002980301.1| hypothetical protein SELMODRAFT_233517 [Selaginella moellendorffii]
 gi|300151917|gb|EFJ18561.1| hypothetical protein SELMODRAFT_233517 [Selaginella moellendorffii]
          Length = 509

 Score =  359 bits (921), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 125/282 (44%), Positives = 173/282 (61%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +I+ G+ + DRTG GT S FG QMRF+L   FPLLTTK+V W+ VV ELLW
Sbjct: 227 YQYLNLIKDIIETGNTKSDRTGTGTISKFGCQMRFNLRNSFPLLTTKRVFWRGVVEELLW 286

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G +N   L   G+ IW                 ++ +LGP+YG QWR +        
Sbjct: 287 FISGSTNAKVLEDKGIHIWKGNGSREYLDSIGLSEREENDLGPVYGFQWRHFGARYSTMH 346

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++  P  RR ++S+WN A + +MALPPCH   QFYV NG+LSC
Sbjct: 347 DDYTGQGVDQLAEVIDKIKNKPDDRRIVLSSWNPADLKQMALPPCHMFAQFYVSNGELSC 406

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT M+A V     G+F+H LGD H+Y NH +    QL 
Sbjct: 407 QMYQRSCDMGLGVPFNIASYALLTCMIAHVCDLAPGDFVHVLGDAHVYTNHVDPLKEQLE 466

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
             P+  P + I  +  D+ SF  +DF L  YE H  I  K++
Sbjct: 467 NVPKPFPILKIATSNKDIDSFTAKDFQLVDYESHQRIAMKMA 508


>gi|289425008|ref|ZP_06426787.1| thymidylate synthase [Propionibacterium acnes SK187]
 gi|289154707|gb|EFD03393.1| thymidylate synthase [Propionibacterium acnes SK187]
          Length = 270

 Score =  359 bits (921), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDKGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+ +V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDGGGTIDQIAKVVEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV          LSCQLYQRSGD FLG+
Sbjct: 121 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 181 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 241 NVRDIDGFELSDITLTGYDPYPALPAPIAV 270


>gi|306818997|ref|ZP_07452714.1| thymidylate synthase [Mobiluncus mulieris ATCC 35239]
 gi|304648190|gb|EFM45498.1| thymidylate synthase [Mobiluncus mulieris ATCC 35239]
          Length = 266

 Score =  359 bits (921), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 136/263 (51%), Positives = 184/263 (69%), Gaps = 2/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DLLR +++ G  + DRTG GTRS F  Q+R+DLS+GFP +TTK ++W  VV ELLW
Sbjct: 6   HQYEDLLREILREGVPKDDRTGTGTRSLFARQLRYDLSQGFPAITTKSLYWHGVVGELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G++N ++L  + + IWDEWAD DG LGP+YG QWR+WP   G  +DQI+ ++++L+ 
Sbjct: 66  FLQGNTNATWLQENNIHIWDEWADTDGNLGPVYGHQWRAWPTEAG-TVDQIAGLIETLKT 124

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV+ + +MAL PCH  FQ +V  G+LS Q+YQRS D+FLG+PFNIASY
Sbjct: 125 DPSSRRMVVSAWNVSDLPRMALAPCHMFFQCWVGAGRLSLQIYQRSCDMFLGVPFNIASY 184

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA   G + GE + T GD H+YNNH  Q   QLSR P   P +I++     +  
Sbjct: 185 ALLTHMLAQQSGLEVGELVWTGGDCHIYNNHVNQVQEQLSRDPYPFPTLILD-QAQSIDD 243

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + +E   L +Y+ H  I A V+V
Sbjct: 244 YTFEMIRLENYQHHPRISAPVAV 266


>gi|148654128|ref|YP_001281221.1| thymidylate synthase [Psychrobacter sp. PRwf-1]
 gi|172048593|sp|A5WHY0|TYSY_PSYWF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148573212|gb|ABQ95271.1| thymidylate synthase [Psychrobacter sp. PRwf-1]
          Length = 286

 Score =  358 bits (920), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 148/277 (53%), Positives = 194/277 (70%), Gaps = 16/277 (5%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL+R+V   G+++ DRTG GTRS FG Q+RFDL  GFPLLTTKKVH KS+ +EL WFL
Sbjct: 10  YLDLIRYVRDHGTEKGDRTGTGTRSHFGAQLRFDLKDGFPLLTTKKVHMKSITYELFWFL 69

Query: 64  RGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP-------DYDGN 107
           +GD++V YL  HGV IW+EW+           +GELGPIYG QWR++         Y+ +
Sbjct: 70  KGDTHVKYLQDHGVRIWNEWSTAEQTARFGRPEGELGPIYGHQWRNYGATKAEDGRYNQD 129

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQ+  +++ ++++P SRR IVS WN A   ++ALPPCH LFQF+V +GKLSCQLYQRS
Sbjct: 130 GVDQVVEVIEQIKSNPNSRRLIVSGWNPAEATQVALPPCHTLFQFFVADGKLSCQLYQRS 189

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASYSLLT M+A V   + GEFI T GD HLY NH +Q + QLSR    L
Sbjct: 190 ADLFLGVPFNIASYSLLTHMIAQVCDLEVGEFIWTGGDCHLYQNHIDQVNEQLSREAYEL 249

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +NP I D+  F ++D  +  Y+ H AI A V+V
Sbjct: 250 PKLWLNPEIKDIFDFTFDDIRVEGYQSHPAIKAPVAV 286


>gi|331006117|ref|ZP_08329451.1| Thymidylate synthase [gamma proteobacterium IMCC1989]
 gi|330420096|gb|EGG94428.1| Thymidylate synthase [gamma proteobacterium IMCC1989]
          Length = 277

 Score =  358 bits (920), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 137/277 (49%), Positives = 178/277 (64%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  ++  G  + DRTG GT S FG Q R +L  GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKAYLDLLDDILSNGVQKGDRTGTGTLSVFGRQYRHNLQDGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N  +L  +GVSIWDEWAD++G+LGP+YG QW +WP  DG  I+QI  +V  L+
Sbjct: 61  WFLKGDTNTQWLKENGVSIWDEWADENGDLGPLYGKQWTAWPTKDGGSINQIDYVVDCLK 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +               MALPPCH L+QFYV N +LS QLY RS
Sbjct: 121 NNPDSRRILFHGWNVEYLPDESVSPQENVKQGRMALPPCHLLYQFYVANNRLSAQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+P+N AS +LL  MLA       GE I + GD H+Y+NH EQ + QLSR PR L
Sbjct: 181 SDSFLGLPYNTASLALLVHMLAQQCDLDVGEVIVSTGDSHIYSNHLEQVNTQLSREPRAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PQ+ I      +  + ++DF +  Y+ H AI A V+V
Sbjct: 241 PQLTIKRKPASIYDYTFDDFEIIGYDAHPAIKAPVAV 277


>gi|297836680|ref|XP_002886222.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332062|gb|EFH62481.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis lyrata
           subsp. lyrata]
          Length = 515

 Score =  358 bits (920), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 128/281 (45%), Positives = 169/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+++  +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 235 YLNMVEDIISNGNAKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 294

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD  A             ++G+LGP+YG QWR +         D
Sbjct: 295 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 354

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV  G+LSCQ+
Sbjct: 355 YTGQGFDQLLDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 414

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT MLA V     G+FIH +GD H+Y  H      QL   
Sbjct: 415 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVIGDAHVYKTHVRPLQEQLQNP 474

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP    + SF   DF L  Y+PH  I  K++V
Sbjct: 475 PKPFPVLKINPEKKQIDSFVAADFDLTGYDPHKKIEMKMAV 515


>gi|289209065|ref|YP_003461131.1| thymidylate synthase [Thioalkalivibrio sp. K90mix]
 gi|288944696|gb|ADC72395.1| thymidylate synthase [Thioalkalivibrio sp. K90mix]
          Length = 272

 Score =  358 bits (920), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 155/277 (55%), Positives = 196/277 (70%), Gaps = 18/277 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+RH+   G DR DRTG GTRS FGYQMRFDL+ GFPL+TTK+ H +SV+HELL
Sbjct: 1   MQQYLDLVRHIRAHGIDRPDRTGTGTRSVFGYQMRFDLAAGFPLVTTKRTHLRSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF+RG++N+ YL  H V IWDEWA + G+LGPIYG QWR+W  +     DQ++ +V +L+
Sbjct: 61  WFIRGETNIGYLKEHKVRIWDEWATEGGDLGPIYGAQWRNWAGH-----DQLAELVSNLK 115

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             PYSRRHI+SAWNVA +               MAL PCH LFQFYV +G+LSCQLYQRS
Sbjct: 116 NRPYSRRHIISAWNVADLPDESISPQENANAGRMALAPCHTLFQFYVADGRLSCQLYQRS 175

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIASY+L T MLA V   + G+F+HT GD HLY+NH +Q D  L R P  L
Sbjct: 176 ADVFLGVPFNIASYALFTHMLAQVADLEPGDFVHTFGDAHLYHNHEQQVDELLGREPLPL 235

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + +NP + DL +F ++D  +R Y+ H  I A V++
Sbjct: 236 PTLHLNPEVTDLFAFTFDDIEVRDYQSHPPIKAPVAI 272


>gi|262341260|ref|YP_003284115.1| thymidylate synthase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272597|gb|ACY40505.1| thymidylate synthase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 264

 Score =  358 bits (920), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 151/264 (57%), Positives = 208/264 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL++V+K G  R+DRTG+GT S FG+QMRF+L KGFPLLTTKK++ +S+++ELL
Sbjct: 1   MKQYLNLLKNVLKNGIKRKDRTGIGTISIFGHQMRFNLEKGFPLLTTKKLNIRSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  H VSIW+EWAD++GELGPIYG+QWR WP Y+G+ IDQI+++++ ++
Sbjct: 61  WFLKGDTNIQYLKDHQVSIWNEWADQNGELGPIYGLQWRKWPTYNGHFIDQIANLIEEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVS+WNV +I  MALPPCH LFQFYV   KLS  LYQRS D+F+G+PFNIAS
Sbjct: 121 FNPNSRRLIVSSWNVGMIQNMALPPCHLLFQFYVSEKKLSLLLYQRSADIFIGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  MLA ++  +  E IH +GD H+YNNH +Q  LQ+ RSPR LP++I+NP++ ++ 
Sbjct: 181 YALLLTMLAKILNLKEKELIHIIGDAHIYNNHIQQVKLQMKRSPRPLPKIILNPSVKNIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F ++DF L++Y P   I   V++
Sbjct: 241 EFCFDDFQLKNYNPFPHIKGDVAI 264


>gi|261749228|ref|YP_003256913.1| thymidylate synthase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497320|gb|ACX83770.1| thymidylate synthase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 279

 Score =  358 bits (920), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 153/265 (57%), Positives = 209/265 (78%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL++V+K G  + DRTG+GT+S FG QMRF+L KGFPLLTTKK+  +S+++ELL
Sbjct: 15  MEQYLDLLKNVLKNGIKKMDRTGIGTKSLFGSQMRFNLKKGFPLLTTKKLSIRSIIYELL 74

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G +N+ YL  + VSIW+EWA+++G+LGPIYG+QWR WP YDG+ IDQI+++++ ++
Sbjct: 75  WFLKGYTNIQYLKENKVSIWNEWANENGDLGPIYGLQWRKWPAYDGHFIDQITNLIKEIK 134

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSCQLYQRSGDVFLGIPFNIA 179
           ++P+SRR IVS+WNV +I +M LPPCH LFQFYV   K LS QLYQRS D+FLG+PFNIA
Sbjct: 135 SNPHSRRLIVSSWNVGMIQEMRLPPCHLLFQFYVSEKKQLSLQLYQRSADIFLGLPFNIA 194

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LL  M+A  + F   EFIHT+GD H+YNNH EQ  LQ+ R P+ LP++++NP++ ++
Sbjct: 195 SYALLLTMVAKTLNFIAKEFIHTIGDAHIYNNHIEQVKLQIQRPPKPLPKILLNPSVKNV 254

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
           L F +EDF L +Y PH  I   V+V
Sbjct: 255 LDFSFEDFKLINYNPHPHIKGDVAV 279


>gi|313886932|ref|ZP_07820635.1| thymidylate synthase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923629|gb|EFR34435.1| thymidylate synthase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 265

 Score =  358 bits (919), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 158/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G++R DRTG GT   FG+QM FDL+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119
           WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G  IDQ+   +  +
Sbjct: 61  WFLKGDTNLQYLHDNKVSIWDEWADETGDLGPIYGAQWRHWFDPHTGQTIDQMQQAIDLI 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWNVA +  M L PCHCL Q+YV   KL  QLYQRS D+FLG+PFNIA
Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGNKLDLQLYQRSADIFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M +      L
Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F Y+DFTL  Y P+  I A VSV
Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSV 265


>gi|332184365|gb|AEE26619.1| Thymidylate synthase [Francisella cf. novicida 3523]
          Length = 274

 Score =  358 bits (919), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 149/277 (53%), Positives = 186/277 (67%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L ++ + G  + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLNYIKENGVLKGDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL+ + V IW+EWA  DGELGPIYG QWR +   +G  IDQI+ ++Q L+
Sbjct: 61  WFLSGSTNIKYLNDNNVRIWNEWATSDGELGPIYGKQWRDF---NGQGIDQIADVIQMLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN  ++                ALPPCH +FQFYV N +LSC L QRS
Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNRLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I      +  ++YEDF   +Y  H AI AK+SV
Sbjct: 238 PKLKILRKPNSIFDYKYEDFEFENYNHHPAIKAKISV 274


>gi|221110571|ref|XP_002155565.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 329

 Score =  358 bits (919), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 136/283 (48%), Positives = 181/283 (63%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +I+ G  + DRTG GT S FG QMRF+L + FPLLTTK+V WK VV ELLW
Sbjct: 47  YQYLNLVKRIIETGYSKADRTGTGTLSIFGGQMRFNLRESFPLLTTKRVFWKGVVEELLW 106

Query: 62  FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------- 102
           F+ G ++ + L + GV IW+                + G+LGPIYG QWR +        
Sbjct: 107 FISGSTDGNILAQKGVQIWNSNGTREFLDKCNLHHREVGDLGPIYGFQWRHFGAKYVDKH 166

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  IDQ++ I+ +++ +P  RR I+SAWN   I  MALPPCH   QFYV NG+LSC
Sbjct: 167 ADYTGQGIDQLAQIIHTIKTNPDDRRMIMSAWNPVDIPLMALPPCHSFCQFYVANGELSC 226

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LGIPFNIASYSLLT ++A V   + G+FIHTLGD H+YNNH      Q+ 
Sbjct: 227 QMYQRSCDMGLGIPFNIASYSLLTYIIAHVCNLKPGDFIHTLGDAHVYNNHVSALKEQIG 286

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           RSPR  P++ I   + ++  F+ +DF L  Y PH  I   ++V
Sbjct: 287 RSPRPFPKLNIKRKVENIDDFKSDDFELIGYNPHQKIKMAMAV 329


>gi|9628075|ref|NP_042669.1| thymidylate synthase [Equid herpesvirus 2]
 gi|6686067|sp|Q89940|TYSY_EHV2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|695245|gb|AAC13860.1| thymidylate synthase [Equid herpesvirus 2]
          Length = 289

 Score =  358 bits (918), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 140/283 (49%), Positives = 184/283 (65%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL+ +R ++  G  R DRTGVGT S FG Q ++ L   FPLLTTK+V W+ V+ ELLW
Sbjct: 7   HQYLNTVREILANGVRRGDRTGVGTLSVFGDQAKYSLRGQFPLLTTKRVFWRGVLEELLW 66

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG ++ + L   GV IWD    +D            G+LGP+YG QWR +        
Sbjct: 67  FIRGSTDSNELSARGVKIWDANGSRDFLARAGLGHREPGDLGPVYGFQWRHFGAAYVDSK 126

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++  ++ +P SRR +++AWN A +  MALPPCH L QFYV  G+LSC
Sbjct: 127 TDYRGQGVDQLRDLIGEIKRNPESRRLVLTAWNPADLPAMALPPCHLLCQFYVAGGELSC 186

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFNIASYSLLT M+A + G + G+FIH LGD H+Y NH E   LQL+
Sbjct: 187 QLYQRSGDMGLGVPFNIASYSLLTYMVAHLTGLEPGDFIHVLGDAHVYLNHVEPLKLQLT 246

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           RSPR  P++ I   + D+  FR EDF L  Y PHAAI  +++V
Sbjct: 247 RSPRPFPRLRILRRVEDIDDFRAEDFALEGYHPHAAIPMEMAV 289


>gi|326572961|gb|EGE22940.1| thymidylate synthase [Moraxella catarrhalis CO72]
          Length = 280

 Score =  358 bits (918), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 152/280 (54%), Positives = 194/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++     +    
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
                DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFDFGFDDIQIADYQAHPAIKAPVAV 280


>gi|189236060|ref|XP_970584.2| PREDICTED: similar to bifunctional dihydrofolate
           reductase-thymidylate synthase [Tribolium castaneum]
          Length = 303

 Score =  358 bits (918), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 135/284 (47%), Positives = 178/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL  ++ +I  G  + DRTGVGT S FG QMR+ L    FPLLTTK+V W+ VV ELL
Sbjct: 20  YQYLSHIKLIIDKGVKKSDRTGVGTFSIFGAQMRYSLRDNVFPLLTTKRVFWRGVVEELL 79

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +N + L    V IWD  +             ++G+LGP+YG QWR +       
Sbjct: 80  WFIKGSTNANELKEKNVHIWDANSTREFLDSVGLNEREEGDLGPVYGFQWRHFGAEYKGM 139

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    IDQ++ +++++R  P  RR I+ AWN   I +MALPPCHCL QF+V NG+LS
Sbjct: 140 HWDYANQGIDQLAHVIETIRNKPNDRRIIMCAWNPVDIPEMALPPCHCLVQFFVANGELS 199

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E    QL
Sbjct: 200 CLLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHVYLNHVEPLQEQL 259

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+PR  P + I   +  +  F ++DF L  YEPH  +   ++V
Sbjct: 260 KRTPRPFPTLKIKRQVSSIEDFVFDDFELSGYEPHPKLSMPMAV 303


>gi|17137556|ref|NP_477367.1| Ts [Drosophila melanogaster]
 gi|13959716|sp|O76511|TYSY_DROME RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|7295876|gb|AAF51176.1| Ts [Drosophila melanogaster]
 gi|19528437|gb|AAL90333.1| RE18955p [Drosophila melanogaster]
 gi|220948118|gb|ACL86602.1| CG3181-PA [synthetic construct]
 gi|220957368|gb|ACL91227.1| Ts-PA [synthetic construct]
          Length = 321

 Score =  358 bits (918), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 142/286 (49%), Positives = 183/286 (63%), Gaps = 23/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MH YLDLLRH+I  G  R DRT VGT S FG QMRFD+   FPLLTTK+V +++V  ELL
Sbjct: 37  MH-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+ G ++   L    V IWD  + ++            G+LGP+YG QWR +       
Sbjct: 96  WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158
             DY G  IDQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QFYV    G+
Sbjct: 156 DDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGE 215

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    
Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R+PR  P++II   + D+  FR+EDF +  Y PH  I   ++V
Sbjct: 276 QLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321


>gi|281350922|gb|EFB26506.1| hypothetical protein PANDA_011650 [Ailuropoda melanoleuca]
          Length = 276

 Score =  358 bits (918), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 128/276 (46%), Positives = 171/276 (61%), Gaps = 20/276 (7%)

Query: 9   RHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSN 68
            H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF++G +N
Sbjct: 1   EHILRCGVRKDDRTGTGTLSVFGLQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTN 60

Query: 69  VSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------DYDGNV 108
              L   GV IWD    +D            G+LGP+YG QWR +         DY G  
Sbjct: 61  AKELSSKGVKIWDANGSRDFLDSLGFCSREEGDLGPVYGFQWRHFGAEYKDMDSDYSGQG 120

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           IDQ+  ++ +++ +P  RR I+  WN   +  MALPPCH L QFYV NG+LSCQLYQRSG
Sbjct: 121 IDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSG 180

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R PR  P
Sbjct: 181 DMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKMQLQREPRPFP 240

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           ++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 241 KLKILRKVETIDDFKAEDFQIEGYCPHPTIKMEMAV 276


>gi|160872451|ref|ZP_02062583.1| thymidylate synthase [Rickettsiella grylli]
 gi|159121250|gb|EDP46588.1| thymidylate synthase [Rickettsiella grylli]
          Length = 264

 Score =  358 bits (918), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 161/264 (60%), Positives = 191/264 (72%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLD L H++K G  + DRTG GT STFGYQMRFDL++GFPLLTTKK+H KSV+HELL
Sbjct: 1   MRVYLDFLHHILKKGQPKIDRTGTGTLSTFGYQMRFDLNRGFPLLTTKKIHLKSVIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+ YL+ H VSIWDEWAD  G LGPIYG QWRSWP  +   IDQ+S+++Q + 
Sbjct: 61  WFLRGDTNIHYLNAHQVSIWDEWADSKGNLGPIYGKQWRSWPTTNDQSIDQLSTLIQQIN 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWNV  + KMALPPCH LFQFYV N +LSCQLYQRS D FLG+PFNIAS
Sbjct: 121 VNPDSRRLIVSAWNVGELKKMALPPCHLLFQFYVANDQLSCQLYQRSADAFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT M+A     + GEFI T GD H+Y NH EQ   QL+R P   PQ+ I      L 
Sbjct: 181 YALLTQMIAQQCHLKVGEFIWTGGDCHIYCNHLEQVHCQLARQPYLAPQLKILRKPKTLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + Y+DF +  Y  H AI A V+V
Sbjct: 241 DYVYDDFLVTDYHYHPAIKAPVAV 264


>gi|313835878|gb|EFS73592.1| thymidylate synthase [Propionibacterium acnes HL037PA2]
 gi|314927122|gb|EFS90953.1| thymidylate synthase [Propionibacterium acnes HL044PA1]
 gi|314970765|gb|EFT14863.1| thymidylate synthase [Propionibacterium acnes HL037PA3]
 gi|328906030|gb|EGG25805.1| thymidylate synthase [Propionibacterium sp. P08]
          Length = 270

 Score =  358 bits (918), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 160/270 (59%), Positives = 201/270 (74%), Gaps = 6/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL+ ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLQRILDEGVRREDRTGTGTLSVFGHQMIFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+ V +LH + + IWDEWAD++G+LGPIYG QWRSWPD DG  IDQI+ +++ +R
Sbjct: 61  WFLRGDTTVGWLHDNAIHIWDEWADENGDLGPIYGRQWRSWPDGDGGTIDQIAKVIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA +D+MALPPCH LFQFYV          LSCQLYQRSGD FLG+
Sbjct: 121 TNPWSRRHIVSAWNVAEVDEMALPPCHTLFQFYVTPDDRGEPTWLSCQLYQRSGDTFLGV 180

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD HLY NH +QA  QL R PR LP + +NP
Sbjct: 181 PFNIASYALLTYLVASVTGLKPLRFVHTLGDAHLYLNHLDQAHEQLKREPRHLPTLTVNP 240

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 241 NVRDIDGFELSDLTLTGYDPYPALPAPIAV 270


>gi|302759210|ref|XP_002963028.1| hypothetical protein SELMODRAFT_404548 [Selaginella moellendorffii]
 gi|300169889|gb|EFJ36491.1| hypothetical protein SELMODRAFT_404548 [Selaginella moellendorffii]
          Length = 502

 Score =  358 bits (918), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 126/282 (44%), Positives = 173/282 (61%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L++ +I+ G+ R DRTG GT S FG QMRF+L   FPLLTTK+V W+ VV ELLW
Sbjct: 220 YQYLNLIKDIIETGNTRSDRTGTGTISKFGCQMRFNLRNSFPLLTTKRVFWRGVVEELLW 279

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G +N   L   G+ IW                 ++ +LGP+YG QWR +        
Sbjct: 280 FISGSTNAKVLEDKGIHIWKGNGSREYLDSIGLSEREENDLGPVYGFQWRHFGARYSTMH 339

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++  P  RR ++S+WN A + +MALPPCH   QFYV NG+LSC
Sbjct: 340 DDYTGQGVDQLAEVIDKIKNKPDDRRIVLSSWNPADLKQMALPPCHMFAQFYVSNGELSC 399

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT M+A V     G+F+H LGD H+Y NH +    QL 
Sbjct: 400 QMYQRSCDMGLGVPFNIASYALLTCMIAHVCDLAPGDFVHVLGDAHVYTNHVDPLKEQLE 459

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
             P+  P + I  +  D+ SF  +DF L  YE H  I  K++
Sbjct: 460 NVPKPFPILKIATSNKDIDSFTAKDFQLVDYESHQRIAMKMA 501


>gi|227875722|ref|ZP_03993850.1| thymidylate synthase [Mobiluncus mulieris ATCC 35243]
 gi|269976729|ref|ZP_06183705.1| thymidylate synthase [Mobiluncus mulieris 28-1]
 gi|307700267|ref|ZP_07637307.1| thymidylate synthase [Mobiluncus mulieris FB024-16]
 gi|227843664|gb|EEJ53845.1| thymidylate synthase [Mobiluncus mulieris ATCC 35243]
 gi|269935094|gb|EEZ91652.1| thymidylate synthase [Mobiluncus mulieris 28-1]
 gi|307614478|gb|EFN93707.1| thymidylate synthase [Mobiluncus mulieris FB024-16]
          Length = 266

 Score =  358 bits (918), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 135/263 (51%), Positives = 184/263 (69%), Gaps = 2/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DLLR +++ G  + DRTG GTRS F  Q+R+DLS+GFP +TTK ++W  VV ELLW
Sbjct: 6   HQYEDLLREILREGVPKDDRTGTGTRSLFARQLRYDLSQGFPAITTKSLYWHGVVGELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G++N ++L  + + IWDEWAD DG LGP+YG QWR+WP   G  +DQI+ ++++L+ 
Sbjct: 66  FLQGNTNATWLQENNIHIWDEWADTDGNLGPVYGHQWRAWPTEAG-TVDQIAGLIETLKT 124

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV+ + +MAL PCH  FQ +V  G+LS Q+YQRS D+FLG+PFNIASY
Sbjct: 125 DPSSRRMVVSAWNVSDLPRMALAPCHMFFQCWVGAGRLSLQIYQRSCDMFLGVPFNIASY 184

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA   G + GE + T GD H+YNNH  Q   QLSR P   P +I++     +  
Sbjct: 185 ALLTHMLAQQSGLEVGELVWTGGDCHIYNNHVNQVQEQLSRDPYPFPTLILD-QAQSIDD 243

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + ++   L +Y+ H  I A V+V
Sbjct: 244 YTFDMIRLENYQHHPRISAPVAV 266


>gi|167627658|ref|YP_001678158.1| thymidylate synthase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|189036935|sp|B0TYI1|TYSY_FRAP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|167597659|gb|ABZ87657.1| Thymidylate synthase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 274

 Score =  358 bits (918), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 145/277 (52%), Positives = 188/277 (67%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++   G+ + DRTG GT S FGYQMRFDL +GFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLKYIKDNGTKKGDRTGTGTTSIFGYQMRFDLQQGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +NV YL+ + V IW+EWA ++GELGPIYG QWR +   +G  IDQI+ +++ L+
Sbjct: 61  WFLSGSTNVKYLNDNKVRIWNEWATEEGELGPIYGKQWRDF---NGEGIDQIAEVIEMLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN  ++                ALPPCH +FQFY+ + KLSC L QRS
Sbjct: 118 TNPNSRRILVSAWNPCVVPSEKISPQENVAKGNSALPPCHAMFQFYIADNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GEFI + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMIAQQCDLDVGEFIWSGGDCHIYNNHIEQVNEQLSREPLDL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF  ++Y+ H AI AK+SV
Sbjct: 238 PTLKILRKPSSIFDYKYEDFEFQNYKHHPAIKAKISV 274


>gi|77163769|ref|YP_342294.1| thymidylate synthase [Nitrosococcus oceani ATCC 19707]
 gi|254436106|ref|ZP_05049613.1| thymidylate synthase [Nitrosococcus oceani AFC27]
 gi|123595153|sp|Q3JEI2|TYSY_NITOC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|76882083|gb|ABA56764.1| thymidylate synthase [Nitrosococcus oceani ATCC 19707]
 gi|207089217|gb|EDZ66489.1| thymidylate synthase [Nitrosococcus oceani AFC27]
          Length = 264

 Score =  357 bits (917), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 152/264 (57%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L++ ++  G +R DRTG GT S FG+QMRFDL +GFPL+TTKK+H +++  ELL
Sbjct: 1   MKPYLELIQKILDTGVERDDRTGTGTWSIFGHQMRFDLRQGFPLITTKKLHIRAIFIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++NV YLH HGV+IWDEWAD+ GELGPIYG QWRSWP  DG  +DQ++  +  +R
Sbjct: 61  WFLRGETNVKYLHDHGVTIWDEWADEQGELGPIYGYQWRSWPLPDGGYLDQMAKTLTQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P+SRRH+V A+N A +D+MALPPCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NHPHSRRHVVVAYNPACVDEMALPPCHALFQFYVAQGRLSCQLYQRSADVFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT ++A       GEF+ T GDVHLY NH E A LQL+R P +LP + I      L 
Sbjct: 181 YALLTHLIAQQCDLDVGEFVWTGGDVHLYRNHLEPARLQLTREPLSLPHLRIKRRPPSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            ++Y+D  +  Y+ + AI A +SV
Sbjct: 241 EYQYDDLEIVDYQSYPAIKAAISV 264


>gi|1706522|sp|P51820|DRTS_SOYBN RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|999190|gb|AAB34317.1| dihydrofolate reductase-thymidylate synthase [Glycine max]
 gi|1096144|prf||2111237A dihydrofolate reductase-thymidylate synthase
          Length = 530

 Score =  357 bits (917), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 133/281 (47%), Positives = 170/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L++ +I  G+ + DRTG GT S FG QMRF+L   FPLLTTKKV W+ VV ELLWF+
Sbjct: 250 YLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVEELLWFI 309

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW--------PD 103
            G +N   L   G+ IWD  A             ++G+LGP+YG QWR +         D
Sbjct: 310 SGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFGARYTDMHHD 369

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN   +  MALPPCH   QFYV +G+LSCQ+
Sbjct: 370 YSGQGFDQLLDVINKIKRNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVAHGELSCQM 429

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LGIPFNIASY+LLT M+A V     G+FIH +GD H+Y NH      QL   
Sbjct: 430 YQRSADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPLQEQLHNQ 489

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   D+ SF   DF L  Y+PH  I  K+SV
Sbjct: 490 PKPFPTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLSV 530


>gi|297744418|emb|CBI37680.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  357 bits (917), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 133/281 (47%), Positives = 170/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+  +I  G  R DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 328 YLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFI 387

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD  A +D            G+LGPIYG QWR +         D
Sbjct: 388 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHAD 447

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV +G+LSCQ+
Sbjct: 448 YTGQGFDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQM 507

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT M+A V     G+FIH +GD H+Y  H      QL + 
Sbjct: 508 YQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKL 567

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   ++ SF   DF L  Y+PH  I  K++V
Sbjct: 568 PKPFPILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 608


>gi|195470923|ref|XP_002087756.1| GE14974 [Drosophila yakuba]
 gi|194173857|gb|EDW87468.1| GE14974 [Drosophila yakuba]
          Length = 321

 Score =  357 bits (917), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 138/284 (48%), Positives = 182/284 (64%), Gaps = 22/284 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLLR +I  G  R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V  ELLWF
Sbjct: 38  QYLDLLRQIIANGEQRMDRTQVGTLSLFGSQMRFDMRQSFPLLTTKRVFFRAVAEELLWF 97

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           + G ++   L    V IWD  + ++            G+LGP+YG QWR +         
Sbjct: 98  VAGKTDAKLLQAKNVHIWDGNSTREFLDKLGFTERAVGDLGPVYGFQWRHFGAEYATCDD 157

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKLS 160
           DY G  IDQ+  ++ +++ +P  RR I+SAWN   I KMALPPCHCL QFYV    G+LS
Sbjct: 158 DYSGKGIDQLRQVIDTIKNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGELS 217

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    QL
Sbjct: 218 CQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQL 277

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+PR  P++II   + D+  FR+EDF +  Y P+  I   ++V
Sbjct: 278 QRTPRPFPKLIIKRQVQDIEDFRFEDFEIVDYNPYPKIKMDMAV 321


>gi|21672690|ref|NP_660757.1| thymidylate synthase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25091456|sp|Q8K9C3|TYSY_BUCAP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|21623330|gb|AAM67968.1| thymidylate synthase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 264

 Score =  357 bits (917), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 151/264 (57%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ +IK G+ ++DRTG GT S FG+ M+FDL KGFPL+TTKK H  S++HELL
Sbjct: 1   MKQYLDLIKKIIKNGNSKKDRTGTGTLSIFGHHMKFDLKKGFPLITTKKCHIPSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG++N+ YL+ + +SIWD WADK G+LGPIYG QWRSW   +G  IDQI ++++ ++
Sbjct: 61  WFLRGETNIKYLNENKISIWDNWADKFGDLGPIYGKQWRSWDTSNGKKIDQIKNVLKQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR +VS+WNV  IDKM+L PCH LFQFYV   KLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 EDPDSRRILVSSWNVGEIDKMSLAPCHILFQFYVLKKKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y++L  M+A     Q GEF+ T GDVHLY NH E A  Q+ R P+ LP++II      L 
Sbjct: 181 YAILIHMIAQQCNLQVGEFLWTGGDVHLYKNHVELAKKQILRIPKKLPELIILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y+P++ I  K+SV
Sbjct: 241 QYSFEDFKIVGYKPYSLIKGKISV 264


>gi|89256104|ref|YP_513466.1| thymidylate synthase [Francisella tularensis subsp. holarctica LVS]
 gi|115314578|ref|YP_763301.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502122|ref|YP_001428187.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010790|ref|ZP_02275721.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367429|ref|ZP_04983455.1| thymidylate synthase [Francisella tularensis subsp. holarctica 257]
 gi|290954512|ref|ZP_06559133.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312028|ref|ZP_06802843.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|122325397|sp|Q0BMM0|TYSY_FRATO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123401607|sp|Q2A486|TYSY_FRATH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231700|sp|A7NB78|TYSY_FRATF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|89143935|emb|CAJ79154.1| thymidylate synthase [Francisella tularensis subsp. holarctica LVS]
 gi|115129477|gb|ABI82664.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253245|gb|EBA52339.1| thymidylate synthase [Francisella tularensis subsp. holarctica 257]
 gi|156252725|gb|ABU61231.1| thymidylate synthase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 274

 Score =  357 bits (917), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 148/277 (53%), Positives = 184/277 (66%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+ L+++ + G  + DRTG GTRS FGYQMRFDL KGFPL+TTKK+H  SVVHELL
Sbjct: 1   MREYLNFLKYIKENGVLKNDRTGTGTRSIFGYQMRFDLQKGFPLVTTKKIHIPSVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G +N+ YL+ + V IW+EWA  DGELGPIYG QWR +   +G  IDQI+ ++Q L+
Sbjct: 61  WFLSGSTNIKYLNDNNVRIWNEWATVDGELGPIYGKQWRDF---NGQGIDQIADVIQMLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +V AWN  ++                ALPPCH +FQFYV N KLSC L QRS
Sbjct: 118 TNPNSRRILVLAWNPCVVPSEKISPQENVVKGNSALPPCHAMFQFYVANNKLSCMLTQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIASYSLLT M+A       GE I + GD H+YNNH EQ + QLSR P  L
Sbjct: 178 ADAFLGVPFNIASYSLLTHMVAQQCNLDVGELIWSGGDCHIYNNHIEQVNEQLSREPLAL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  ++YEDF   +Y  H AI AK+SV
Sbjct: 238 PTLKILRKSNSIFDYKYEDFEFENYNHHPAIKAKISV 274


>gi|3342458|gb|AAC27622.1| thymidylate synthase [Drosophila melanogaster]
          Length = 321

 Score =  357 bits (917), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 141/286 (49%), Positives = 183/286 (63%), Gaps = 23/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MH YLDLLRH+I  G  R DRT VGT S FG QMRFD+   FPLLTTK+V +++V  ELL
Sbjct: 37  MH-YLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMRNSFPLLTTKRVFFRAVAEELL 95

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+ G ++   L    V IWD  + ++            G+LGP+YG QWR +       
Sbjct: 96  WFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRAVGDLGPVYGFQWRHFGAQYGTC 155

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158
             DY G  IDQ+  ++ ++R +P  RR I+SAWN   + KMALPPCHCL QFYV    G+
Sbjct: 156 DDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDMPKMALPPCHCLAQFYVSEKRGE 215

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    
Sbjct: 216 LSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKE 275

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R+PR  P++II   + D+  FR+EDF +  Y PH  I   ++V
Sbjct: 276 QLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321


>gi|289193|gb|AAA32788.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
          Length = 519

 Score =  357 bits (917), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 129/281 (45%), Positives = 169/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+++  +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 239 YLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 298

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD  A             ++G+LGP+YG QWR +         D
Sbjct: 299 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 358

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV  G+LSCQ+
Sbjct: 359 YTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 418

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT MLA V     G+FIH LGD H+Y  H      QL   
Sbjct: 419 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYKTHVRPLQEQLLNP 478

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP    + SF   DF L  Y+PH  I  K++V
Sbjct: 479 PKPFPVLKINPEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 519


>gi|288941276|ref|YP_003443516.1| thymidylate synthase [Allochromatium vinosum DSM 180]
 gi|288896648|gb|ADC62484.1| thymidylate synthase [Allochromatium vinosum DSM 180]
          Length = 279

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 153/279 (54%), Positives = 194/279 (69%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR V+  G D+ DRTGVGTR+ FG Q+RFDL+ GFPLLTTK+VH+KSVV ELL
Sbjct: 1   MQVYLDLLRDVVANGQDQADRTGVGTRAVFGRQVRFDLAAGFPLLTTKRVHFKSVVGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL G ++  +L  HG+ IWDEWA +   LGPIYG QWR+WP  DG  IDQ++ +V ++R
Sbjct: 61  WFLSGSTDNGWLRAHGIRIWDEWATEHDALGPIYGAQWRAWPAPDGRAIDQLAELVATIR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P+SRR +VSAWN A +               MAL PCHCLFQF+V NG+LSCQLYQRS
Sbjct: 121 TRPHSRRLVVSAWNPADLPDETLSPQDNVRAGRMALAPCHCLFQFHVANGRLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF--EQADLQLSRSPR 225
            D+FLG+PFNIASY+LLT ++A     + GEFIHT GD+HLY NH   E    QL R+PR
Sbjct: 181 ADLFLGVPFNIASYALLTHLIAQQCDLEPGEFIHTFGDLHLYRNHLTSEIVHAQLGRAPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP++++      L  + +ED  L+ Y+PH AI A ++V
Sbjct: 241 PLPRLVLKRRPETLFDYGFEDIELQGYDPHPAIRAPIAV 279


>gi|15227185|ref|NP_179230.1| THY-1 (THYMIDYLATE SYNTHASE 1); dihydrofolate reductase/
           thymidylate synthase [Arabidopsis thaliana]
 gi|21264432|sp|Q05762|DRTS1_ARATH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase 1; Short=DHFR-TS 1; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|4544392|gb|AAD22302.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
 gi|17381024|gb|AAL36324.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis
           thaliana]
 gi|21281275|gb|AAM45080.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis
           thaliana]
 gi|330251395|gb|AEC06489.1| thymidylate synthase [Arabidopsis thaliana]
          Length = 519

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 130/281 (46%), Positives = 169/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+++  +I  G+ + DRTG GT S FG QM+F+L + FPLLTTK+V W+ VV ELLWF+
Sbjct: 239 YLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLWFI 298

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD  A             ++G+LGP+YG QWR +         D
Sbjct: 299 SGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHAD 358

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV  G+LSCQ+
Sbjct: 359 YTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSCQM 418

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASYSLLT MLA V     G+FIH LGD H+Y  H      QL   
Sbjct: 419 YQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYKTHVRPLQEQLLNL 478

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P M INP    + SF   DF L  Y+PH  I  K++V
Sbjct: 479 PKPFPVMKINPEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 519


>gi|294781666|ref|ZP_06747001.1| thymidylate synthase [Enterococcus faecalis PC1.1]
 gi|294451218|gb|EFG19685.1| thymidylate synthase [Enterococcus faecalis PC1.1]
 gi|315033984|gb|EFT45916.1| thymidylate synthase [Enterococcus faecalis TX0017]
 gi|329571685|gb|EGG53366.1| thymidylate synthase [Enterococcus faecalis TX1467]
          Length = 317

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 147/313 (46%), Positives = 187/313 (59%), Gaps = 52/313 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L + +++ G  + DRTG GT S FGYQMRFDL+KGFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL      IWDEWA                                       
Sbjct: 65  KGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEEHQKF 124

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNV--IDQISSIVQSLRADPYSRRHIVS 131
                      +K GELG IYG QWR W   DGN   IDQ++++++ ++ +P SRR IVS
Sbjct: 125 CDTILNDAEFAEKYGELGNIYGAQWRHWETKDGNGSFIDQLANVIEMIKTNPDSRRLIVS 184

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A  
Sbjct: 185 AWNPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHE 244

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G   GEF+HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  
Sbjct: 245 TGLAVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEG 304

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I A ++V
Sbjct: 305 YDPHPTIKAPIAV 317


>gi|228469308|ref|ZP_04054334.1| thymidylate synthase [Porphyromonas uenonis 60-3]
 gi|228309207|gb|EEK17809.1| thymidylate synthase [Porphyromonas uenonis 60-3]
          Length = 265

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 158/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G++R DRTG GT   FG+QM FDL+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119
           WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G  IDQ+   +  +
Sbjct: 61  WFLKGDTNLQYLHDNKVSIWDEWADEAGDLGPIYGAQWRHWFDPHTGQTIDQMQQALDLI 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWNVA +  M L PCHCL Q+YV   KL  QLYQRS D+FLG+PFNIA
Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGDKLDLQLYQRSADIFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M +      L
Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F Y+DFTL  Y P+  I A VSV
Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSV 265


>gi|326571344|gb|EGE21361.1| thymidylate synthase [Moraxella catarrhalis BC8]
          Length = 280

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 152/280 (54%), Positives = 194/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++     +    
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
                DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPSSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFDFGFDDIQIADYQAHPAIKAPVAV 280


>gi|301774490|ref|XP_002922670.1| PREDICTED: thymidylate synthase-like [Ailuropoda melanoleuca]
          Length = 324

 Score =  356 bits (915), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 128/275 (46%), Positives = 171/275 (62%), Gaps = 20/275 (7%)

Query: 10  HVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNV 69
           H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF++G +N 
Sbjct: 50  HILRCGVRKDDRTGTGTLSVFGLQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNA 109

Query: 70  SYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------DYDGNVI 109
             L   GV IWD    +D            G+LGP+YG QWR +         DY G  I
Sbjct: 110 KELSSKGVKIWDANGSRDFLDSLGFCSREEGDLGPVYGFQWRHFGAEYKDMDSDYSGQGI 169

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++ +++ +P  RR I+  WN   +  MALPPCH L QFYV NG+LSCQLYQRSGD
Sbjct: 170 DQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSGD 229

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R PR  P+
Sbjct: 230 MGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKMQLQREPRPFPK 289

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 290 LKILRKVETIDDFKAEDFQIEGYCPHPTIKMEMAV 324


>gi|194758475|ref|XP_001961487.1| GF14907 [Drosophila ananassae]
 gi|190615184|gb|EDV30708.1| GF14907 [Drosophila ananassae]
          Length = 340

 Score =  356 bits (915), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 136/285 (47%), Positives = 180/285 (63%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+LLR +I  G  R DRT VGT S FG QMRF L   FPLLTTK+V +++V  ELLW
Sbjct: 56  KQYLNLLRSIINTGERRMDRTEVGTLSIFGSQMRFSLRGCFPLLTTKRVFFRAVAEELLW 115

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G ++   L    V IWD  + ++            G+LGP+YG QWR +        
Sbjct: 116 FVAGKTDAKLLQAKNVHIWDGNSTREFLDKLGHTDRAVGDLGPVYGFQWRHFGAEYTTCD 175

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGKL 159
            DY G  IDQ+  ++ +++ +P  RR I+SAWN   I KMALPPCHCL QFYV  + G+L
Sbjct: 176 DDYRGKGIDQLKHVIDTIKKNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQERGEL 235

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    Q
Sbjct: 236 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLQEQ 295

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R PR  P+++I   + D+  FRYEDF +  Y P+  I   +++
Sbjct: 296 LEREPRPFPKLVIKRQVQDIEDFRYEDFEIVDYNPYPKIKMDMAI 340


>gi|326563467|gb|EGE13730.1| thymidylate synthase [Moraxella catarrhalis 103P14B1]
 gi|326573777|gb|EGE23734.1| thymidylate synthase [Moraxella catarrhalis 101P30B1]
          Length = 280

 Score =  356 bits (915), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 152/280 (54%), Positives = 194/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++     +    
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
                DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQITDYQAHPAIKAPVAV 280


>gi|223646840|gb|ACN10178.1| Thymidylate synthase [Salmo salar]
 gi|223672701|gb|ACN12532.1| Thymidylate synthase [Salmo salar]
          Length = 333

 Score =  356 bits (915), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 123/281 (43%), Positives = 173/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+   ++++ G  + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 53  YLNQCEYILQHGHRKGDRTGTGVISVFGSQTRYSLRDQFPLLTTKRVFWKGILEELLWFI 112

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
           +G +N   L   GV IWD                ++G+LGP+YG QWR +         D
Sbjct: 113 KGSTNAKELTEKGVRIWDANGSRQFLDKMGFTDREEGDLGPVYGFQWRHYGAEYSDMHKD 172

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++ +++ +P  RR I+ AWN   +  M LPPCH L QFYV +G+LSCQL
Sbjct: 173 YTGQGVDQLQKVIDTIKTNPEDRRIIMCAWNPKDLPHMVLPPCHALCQFYVIDGELSCQL 232

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y+NH E   +QL R 
Sbjct: 233 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYSNHIEPLKVQLQRE 292

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R  P++ +   +  +  FR EDF +  Y PH  I  +++V
Sbjct: 293 IRPFPKLKLLRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 333


>gi|270005647|gb|EFA02095.1| hypothetical protein TcasGA2_TC007732 [Tribolium castaneum]
          Length = 330

 Score =  356 bits (915), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 135/284 (47%), Positives = 178/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL  ++ +I  G  + DRTGVGT S FG QMR+ L    FPLLTTK+V W+ VV ELL
Sbjct: 47  YQYLSHIKLIIDKGVKKSDRTGVGTFSIFGAQMRYSLRDNVFPLLTTKRVFWRGVVEELL 106

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +N + L    V IWD  +             ++G+LGP+YG QWR +       
Sbjct: 107 WFIKGSTNANELKEKNVHIWDANSTREFLDSVGLNEREEGDLGPVYGFQWRHFGAEYKGM 166

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    IDQ++ +++++R  P  RR I+ AWN   I +MALPPCHCL QF+V NG+LS
Sbjct: 167 HWDYANQGIDQLAHVIETIRNKPNDRRIIMCAWNPVDIPEMALPPCHCLVQFFVANGELS 226

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH E    QL
Sbjct: 227 CLLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHVYLNHVEPLQEQL 286

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+PR  P + I   +  +  F ++DF L  YEPH  +   ++V
Sbjct: 287 KRTPRPFPTLKIKRQVSSIEDFVFDDFELSGYEPHPKLSMPMAV 330


>gi|251796664|ref|YP_003011395.1| thymidylate synthase [Paenibacillus sp. JDR-2]
 gi|247544290|gb|ACT01309.1| thymidylate synthase [Paenibacillus sp. JDR-2]
          Length = 320

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 156/312 (50%), Positives = 193/312 (61%), Gaps = 50/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL LLRHV++ G  + DRTG GT STFGYQMRFDL+KGFP+LTTK+V +K +V ELLWF
Sbjct: 9   EYLQLLRHVLENGVKKEDRTGTGTISTFGYQMRFDLAKGFPILTTKRVPFKLIVSELLWF 68

Query: 63  LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84
           ++GDSN+ YL +H   IWDEWA                                      
Sbjct: 69  IKGDSNIRYLLKHKNHIWDEWAFKRWVESTDYNGPDMTNFGLRSQTDEAFNVVYQEQMDK 128

Query: 85  ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                       +K G+LG +YG QWR W    G  IDQ+  I+ +++ +P SRR IVSA
Sbjct: 129 FTNLVLTDDAFAEKYGDLGNVYGKQWREWRTTQGETIDQLKGIIDTIKKNPDSRRLIVSA 188

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH +FQFYV NGKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A   
Sbjct: 189 WNPEDVPSMALPPCHTMFQFYVINGKLSCQLYQRSGDIFLGIPFNIASYALLTHLIAQEC 248

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G   GEFIHTLGD H+Y NH EQ D+QL R  R LP + INP++  +     ED  L +Y
Sbjct: 249 GLGVGEFIHTLGDAHIYLNHLEQIDIQLQRDMRELPVLAINPDVSSIFDAEVEDIKLENY 308

Query: 253 EPHAAILAKVSV 264
           +PH  I A V+V
Sbjct: 309 QPHPTIKAPVAV 320


>gi|257869664|ref|ZP_05649317.1| thymidylate synthase [Enterococcus gallinarum EG2]
 gi|257803828|gb|EEV32650.1| thymidylate synthase [Enterococcus gallinarum EG2]
          Length = 315

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 147/315 (46%), Positives = 189/315 (60%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL + +++ G+ + DRTG GT+S FG+QMRFDLS+GFPLLTTK+V +  +  EL
Sbjct: 1   MEQAYLDLGKKILETGNVKGDRTGTGTKSIFGHQMRFDLSQGFPLLTTKRVPFGLIKSEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84
           LWFL+GD+N+ +L +H   IWDEWA                                   
Sbjct: 61  LWFLKGDTNIRFLLQHKNHIWDEWAFERYIKSEDYTGPDMTDFGRRSLIDEEFNASYQEE 120

Query: 85  ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                          +K G+LG +YG QWR W    G  IDQI  +++ ++  P SRR I
Sbjct: 121 LQKFCERILNDEAFAEKFGDLGHVYGYQWRHWETTKGEFIDQIKEVIEMIKTTPDSRRLI 180

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV  G+LSCQLYQRS DVFLG+PFNIASY+LLT ++A
Sbjct: 181 VSAWNPEDVPTMALPPCHTMFQFYVHEGRLSCQLYQRSADVFLGVPFNIASYALLTHLIA 240

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G Q GEFIHTLGD HLY+NH EQ   QLSR+ R+ P + +NP    +  F   D T+
Sbjct: 241 HETGLQVGEFIHTLGDAHLYSNHMEQMKEQLSRTIRSAPTLHLNPEKQSIFDFEMGDITI 300

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I A ++V
Sbjct: 301 EGYDPHPTIKAPIAV 315


>gi|225428412|ref|XP_002280254.1| PREDICTED: similar to Bifunctional dihydrofolate
           reductase-thymidylate synthase [Vitis vinifera]
          Length = 524

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 133/281 (47%), Positives = 170/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+  +I  G  R DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 244 YLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFI 303

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD  A +D            G+LGPIYG QWR +         D
Sbjct: 304 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHAD 363

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV +G+LSCQ+
Sbjct: 364 YTGQGFDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQM 423

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT M+A V     G+FIH +GD H+Y  H      QL + 
Sbjct: 424 YQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKL 483

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   ++ SF   DF L  Y+PH  I  K++V
Sbjct: 484 PKPFPILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 524


>gi|296113703|ref|YP_003627641.1| thymidylate synthase [Moraxella catarrhalis RH4]
 gi|295921397|gb|ADG61748.1| thymidylate synthase [Moraxella catarrhalis RH4]
 gi|326562443|gb|EGE12762.1| thymidylate synthase [Moraxella catarrhalis 7169]
 gi|326562812|gb|EGE13107.1| thymidylate synthase [Moraxella catarrhalis 46P47B1]
 gi|326570637|gb|EGE20673.1| thymidylate synthase [Moraxella catarrhalis BC7]
 gi|326574801|gb|EGE24735.1| thymidylate synthase [Moraxella catarrhalis O35E]
          Length = 280

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 151/280 (53%), Positives = 194/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++     +    
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
                DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEAAEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT ++A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHVVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQIADYQAHPAIKAPVAV 280


>gi|325068281|ref|ZP_08126954.1| thymidylate synthase [Actinomyces oris K20]
          Length = 299

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 139/264 (52%), Positives = 178/264 (67%), Gaps = 4/264 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL  V+  G+ + DRTG GTRS F  Q+R+DL +GFP +TTK V  K+V  ELLWFL
Sbjct: 37  YENLLAEVLTNGTAKSDRTGTGTRSLFARQLRYDLQRGFPRITTKFVAMKAVKGELLWFL 96

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV +L   G++IWDEWAD  GELGP+YG QWRSWP  DG  IDQI+ ++ +LR DP
Sbjct: 97  RGETNVRWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGAIDQIAGLIDTLRTDP 156

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +  MAL PCH  FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 157 DSRRMLVSAWNVSELGSMALAPCHAFFQCYVADGRLSLQIYQRSADLFLGVPFNIASYAL 216

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDLLS 241
           LT MLA     + GE I T GD H+Y+NH EQ   QLSR P     P + +      + +
Sbjct: 217 LTHMLAQQTDLEPGELIWTGGDCHIYDNHIEQVRTQLSRVPSAHPFPTLRLERA-ESIDA 275

Query: 242 FRYEDFTL-RSYEPHAAILAKVSV 264
           +  +D    + YE H  I A V+V
Sbjct: 276 YDMDDIDASQGYEHHPTIKAPVAV 299


>gi|313812335|gb|EFS50049.1| thymidylate synthase [Propionibacterium acnes HL025PA1]
          Length = 269

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 7/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD  G  IDQI+ +V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPD-GGGTIDQIAKVVEQIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA ID+MALPPCH LFQFYV          LSCQLYQRSGD FLG+
Sbjct: 120 TNPWSRRHIVSAWNVAEIDQMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           N+ D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 240 NVRDIDGFELSDITLTGYDPYPALPAPIAV 269


>gi|329895892|ref|ZP_08271220.1| Thymidylate synthase [gamma proteobacterium IMCC3088]
 gi|328922110|gb|EGG29469.1| Thymidylate synthase [gamma proteobacterium IMCC3088]
          Length = 277

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 145/277 (52%), Positives = 185/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G D+ DRTG GTRS F  Q R DLS+GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKVYLDLLRDIMAHGVDKSDRTGTGTRSVFARQFRHDLSEGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N ++L  +GVSIWDEWA ++G+LGPIYG QWRSWP  DG  I+QI  ++  L+
Sbjct: 61  WFLRGDTNTAWLRENGVSIWDEWATEEGDLGPIYGAQWRSWPTADGGAINQIDYVIDCLK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR +   WNV  +              KMALPPCH L+QFYV NG+LS QLY RS
Sbjct: 121 HKPDSRRILFHGWNVEYLPDETLSPQENVRQGKMALPPCHLLYQFYVANGRLSAQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+P+N+AS +LLT ML      + GE I + GD H+Y+NHFEQ + QL R PR L
Sbjct: 181 SDSFLGLPYNLASLALLTHMLCQQCELEPGEVIISTGDSHIYSNHFEQVETQLEREPRAL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  + ++DF L  YEPHA I   V++
Sbjct: 241 PTLRIKRKPESIYDYCFDDFELVGYEPHAHIAGAVAI 277


>gi|118781473|ref|XP_311491.3| AGAP010457-PA [Anopheles gambiae str. PEST]
 gi|116129966|gb|EAA07160.3| AGAP010457-PA [Anopheles gambiae str. PEST]
          Length = 302

 Score =  356 bits (913), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/284 (48%), Positives = 182/284 (64%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
             YL L+R +I  GS R DRTGVGT S FG QMRF L  G  PLLTTKKV ++ V  ELL
Sbjct: 19  QAYLQLIRDIINKGSKRLDRTGVGTLSIFGAQMRFSLRDGIIPLLTTKKVFFRGVAEELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +NV  L   GV IWD  +             ++G+LGP+YG QWR +       
Sbjct: 79  WFIKGSTNVKDLQAKGVRIWDGNSTREYLDSCGFTDREEGDLGPVYGFQWRHFGATYKTC 138

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ++ ++  ++ +PY RR I+ AWN + I  MALPPCHCL QF+V +G+LS
Sbjct: 139 HDDYTGQGIDQLAEVIDKIKNNPYDRRIIMCAWNPSDIPNMALPPCHCLAQFFVSDGELS 198

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS DV LG+PFNIASYSLLT M+A V G + GEFIHT GD H+Y NH +    Q+
Sbjct: 199 CQMYQRSADVGLGVPFNIASYSLLTHMIAHVTGLKAGEFIHTTGDTHIYLNHVDGLREQI 258

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+P+  P ++    +  + +F Y+DF + +Y P +AI  K++V
Sbjct: 259 ERTPKKFPTLVFKRKVESIDNFTYDDFEILNYNPQSAIKMKMAV 302


>gi|284992331|ref|YP_003410885.1| thymidylate synthase [Geodermatophilus obscurus DSM 43160]
 gi|284065576|gb|ADB76514.1| thymidylate synthase [Geodermatophilus obscurus DSM 43160]
          Length = 272

 Score =  356 bits (913), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 149/262 (56%), Positives = 193/262 (73%), Gaps = 1/262 (0%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QY DLLR V++ G+ ++DRTG GT S FG ++R+DL++ FPL+TTK VH++S+ +ELLWF
Sbjct: 12  QYEDLLRRVLEQGTPKQDRTGTGTVSLFGERLRYDLAERFPLITTKSVHFRSIAYELLWF 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           LRGDSNV +L  + VSIWDEWA  +GELGP+YGVQWRSWP   G  +DQI+ ++++LR D
Sbjct: 72  LRGDSNVRWLQENRVSIWDEWASPEGELGPVYGVQWRSWPTPGGEHVDQIAGVLETLRTD 131

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR +VSAWNVA +  MAL PCH LFQF+V +G+LSCQLYQRS D+FLG+PFNIASY+
Sbjct: 132 PDSRRMVVSAWNVAALPDMALAPCHALFQFHVADGRLSCQLYQRSADMFLGVPFNIASYA 191

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT M+A+ +G   G+ I   GD H+Y+NH +Q   QLSR     P + + P    L  +
Sbjct: 192 LLTRMVAAQVGLAPGDCIWVGGDCHVYSNHVDQVREQLSREVLPFPTLDLAPAP-SLFDY 250

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
            YE FTLR Y  H AI A V+V
Sbjct: 251 TYEHFTLRDYRHHPAIRAAVAV 272


>gi|326563217|gb|EGE13485.1| thymidylate synthase [Moraxella catarrhalis 12P80B1]
          Length = 280

 Score =  356 bits (913), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 152/280 (54%), Positives = 194/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++     +    
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
                DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPNSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQIADYQAHPAIKAPVAV 280


>gi|225010453|ref|ZP_03700924.1| Thymidylate synthase [Flavobacteria bacterium MS024-3C]
 gi|225005282|gb|EEG43233.1| Thymidylate synthase [Flavobacteria bacterium MS024-3C]
          Length = 274

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 164/277 (59%), Positives = 208/277 (75%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL HV+K G  + DRTG GT S FGYQMRF+LSKGFP++TTKK+H KS+V+ELL
Sbjct: 1   MKQYHDLLNHVLKNGVQKGDRTGTGTLSVFGYQMRFNLSKGFPMVTTKKLHLKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GV IW+EWAD +G+LGP+YG QWR+W   +G  IDQI  ++QS++
Sbjct: 61  WFLKGDTNIGYLQENGVRIWNEWADSNGDLGPVYGKQWRNW---NGEEIDQIKEVIQSIK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR IVSAWN +++              K ALPPCH  FQFYV  GKLSCQLYQRS
Sbjct: 118 ENPNSRRMIVSAWNPSVLPDPKTSFEENVAKGKAALPPCHAFFQFYVAEGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+LLTMM+A V G + G+FIHT GD H+YNNH EQ +LQLSR+P+ L
Sbjct: 178 ADIFLGVPFNIASYALLTMMMAQVCGLEAGDFIHTFGDAHIYNNHMEQIELQLSRTPKDL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M +NP I D+  F +EDFTL +Y+PH  I   V++
Sbjct: 238 PKMTLNPEIKDIFDFDFEDFTLENYDPHPHIKGAVAI 274


>gi|194855206|ref|XP_001968495.1| GG24473 [Drosophila erecta]
 gi|190660362|gb|EDV57554.1| GG24473 [Drosophila erecta]
          Length = 304

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  ++  G  R DRT VGT S FG QMRF++ + FPLLTTK+V +++V  ELLWF
Sbjct: 22  QYLDLLSEILANGEQRMDRTEVGTLSMFGCQMRFNMRESFPLLTTKRVFFRAVAEELLWF 81

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           + G ++   L    V IWD  + ++            G+LGP+YG QWR +         
Sbjct: 82  VAGKTDAKLLQAKNVHIWDGNSSREFLDSLGLTERSVGDLGPVYGFQWRHFGAEYATCDD 141

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGKLSC 161
           DY G  IDQ+  ++ +++ +P  RR I+SAWN   + KM LPPCHCL QF+V   G+LSC
Sbjct: 142 DYSGKGIDQLRRVIDTIKNNPSDRRIILSAWNPVDMPKMVLPPCHCLAQFFVSTRGELSC 201

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    QL 
Sbjct: 202 QLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLK 261

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P++ I   + D+  FR+EDF +  Y P+  I   ++V
Sbjct: 262 RTPRPFPKLNIKRQVQDIDDFRFEDFEIVDYNPYPKIKMDMAV 304


>gi|326569151|gb|EGE19213.1| thymidylate synthase [Moraxella catarrhalis BC1]
          Length = 280

 Score =  355 bits (912), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 152/280 (54%), Positives = 194/280 (69%), Gaps = 16/280 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL+H++  G+D++DRTG GTRS FGYQMRF+L++GFPLLTTKKVH KS++HELL
Sbjct: 1   MKQYLELLQHILNHGTDKQDRTGTGTRSVFGYQMRFNLAEGFPLLTTKKVHMKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWPDYDGN---- 107
           WFL+G++N SYL  + V+IW+EWA  +         GELGPIYG QWR++     +    
Sbjct: 61  WFLKGETNTSYLTDNQVTIWNEWATAEQTARFGRAEGELGPIYGHQWRNFGASKKSDGSY 120

Query: 108 ---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
                DQI+ ++  +  +P SRR IVS WN     ++ALPPCH LFQF+V  GKLSCQLY
Sbjct: 121 HDDGFDQIAWLINEINTNPSSRRLIVSGWNPTEATEVALPPCHTLFQFFVSQGKLSCQLY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LLT M+A V     GEFI T GD HLY NHFEQ  LQLSR P
Sbjct: 181 QRSADVFLGVPFNIASYALLTHMVAQVCHLDVGEFIWTGGDTHLYQNHFEQVKLQLSREP 240

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             L  + +NP +  +  F ++D  +  Y+ H AI A V+V
Sbjct: 241 LPLCSLRLNPKVRSIFEFGFDDIQITDYQAHPAIKAPVAV 280


>gi|227551179|ref|ZP_03981228.1| thymidylate synthase [Enterococcus faecium TX1330]
 gi|227179647|gb|EEI60619.1| thymidylate synthase [Enterococcus faecium TX1330]
          Length = 324

 Score =  355 bits (912), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 150/315 (47%), Positives = 184/315 (58%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  EL
Sbjct: 10  MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84
           LWFL+GD+N+ YL ++   IWDEWA                                   
Sbjct: 70  LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLTDPEFNEEYKKQ 129

Query: 85  ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                          +K G LG IYG QWR W   DG  IDQI  ++++++  P SRR I
Sbjct: 130 SKLFCEKILTDDSFAEKYGNLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLI 189

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A
Sbjct: 190 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 249

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G + GEF+HTLGD HLY NH EQ   QLSR  R  P + +N     +  F  ED  L
Sbjct: 250 HETGLEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQL 309

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I A ++V
Sbjct: 310 EGYDPHPTIKAPIAV 324


>gi|332300790|ref|YP_004442711.1| Thymidylate synthase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177853|gb|AEE13543.1| Thymidylate synthase [Porphyromonas asaccharolytica DSM 20707]
          Length = 265

 Score =  355 bits (912), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 157/265 (59%), Positives = 190/265 (71%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+  V+  G++R DRTG GT   FG+QM FDL+ GFPLLTTKK+H +S++HELL
Sbjct: 1   MQQYLDLIERVLTEGNERTDRTGTGTVGVFGHQMTFDLADGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSL 119
           WFL+GD+N+ YLH + VSIWDEWAD+ G+LGPIYG QWR W D + G  IDQ+   +  +
Sbjct: 61  WFLKGDTNLQYLHDNKVSIWDEWADETGDLGPIYGAQWRHWFDPHTGQTIDQMQQALDLI 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           R  P SRR +VSAWNVA +  M L PCHCL Q+YV   KL  QLYQRS D+FLG+PFNIA
Sbjct: 121 RHQPDSRRIVVSAWNVADLPLMHLSPCHCLMQYYVVGNKLDLQLYQRSADIFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SY+LL MM A V G + G FIHTLGD HLY NH EQA LQL+R+PR LP M +      L
Sbjct: 181 SYALLLMMTAQVTGLRPGRFIHTLGDAHLYKNHLEQARLQLTRTPRPLPTMTLRDRGQSL 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F Y+DFTL  Y P+  I A VS+
Sbjct: 241 FDFVYDDFTLTDYNPYPHIPAPVSI 265


>gi|302848723|ref|XP_002955893.1| hypothetical protein VOLCADRAFT_66296 [Volvox carteri f.
           nagariensis]
 gi|300258861|gb|EFJ43094.1| hypothetical protein VOLCADRAFT_66296 [Volvox carteri f.
           nagariensis]
          Length = 483

 Score =  355 bits (912), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+L+R +I  G+ R DRTG GT S FG   R++L   FPLLT+K+V WK V  ELLWF
Sbjct: 202 QYLELVRELITSGTFRPDRTGTGTYSRFGRTARYNLRHTFPLLTSKRVFWKGVAEELLWF 261

Query: 63  LRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP-------- 102
           +RG +N + L    + IWD                + G+LGP+YG QWR +         
Sbjct: 262 IRGSTNANLLRDKNIHIWDGNSTREYLDSRGLHHREVGDLGPVYGFQWRHFGAAYKDMHT 321

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+ +I++ +R DP  RR I+SAWN A +++MALPPCH   QFYV +G+LSC 
Sbjct: 322 DYTGQGVDQLKAIIEQIRKDPNDRRMIMSAWNPAALNEMALPPCHMFCQFYVADGELSCL 381

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS DV LG+PFNIASY+LLT ++A V G + G+FIH +GD H+Y NH E    QL  
Sbjct: 382 MYQRSCDVGLGVPFNIASYALLTRLVAQVTGLRAGDFIHVMGDTHVYANHVEPLKEQLKN 441

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P + INP   D+ SF +EDF L  Y+PH  I  K++V
Sbjct: 442 TPRHFPILNINPAKTDIDSFVFEDFELVDYQPHQTIKMKMAV 483


>gi|159484697|ref|XP_001700389.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158272276|gb|EDO98078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 478

 Score =  355 bits (912), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 176/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L+R +I  G  R DRTG GT S FG   R++L   FPLLT+K+V WK V  ELLW
Sbjct: 196 QQYLELVRELITSGVFRPDRTGTGTYSRFGRTSRYNLRHTFPLLTSKRVFWKGVAEELLW 255

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G +N + L    + IWD  + ++            G+LGP+YG QWR +        
Sbjct: 256 FISGATNANLLRDKNIHIWDGNSSREFLDGRGLGHREVGDLGPVYGFQWRHFGAEYKDMH 315

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  I+ +L+ DP  RR ++SAWN A + +MALPPCH   QFYV +G+LSC
Sbjct: 316 TDYTGKGVDQLRYIIDTLKKDPNDRRMVMSAWNPAALAEMALPPCHMFCQFYVADGELSC 375

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS DV LG+PFNIASY+LLT ++A V G + GE +H +GD H+Y NH E    QL 
Sbjct: 376 LMYQRSCDVGLGVPFNIASYALLTRLVAQVTGLRAGELVHVMGDTHVYANHVEPLREQLK 435

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +PR  P + INP+  D+ SF +EDF L  Y PH  I  +++V
Sbjct: 436 NTPRHFPTLRINPDKKDIDSFVFEDFELVDYNPHKTIKMQMAV 478


>gi|213511040|ref|NP_001134715.1| Thymidylate synthase [Salmo salar]
 gi|209735384|gb|ACI68561.1| Thymidylate synthase [Salmo salar]
          Length = 333

 Score =  355 bits (912), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 123/281 (43%), Positives = 172/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+   ++++ G  + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 53  YLNQCEYILQHGHRKGDRTGTGVISVFGSQTRYSLRDQFPLLTTKRVFWKGILEELLWFI 112

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
           +G +N   L   GV IWD                ++G+LGP+YG QWR +         D
Sbjct: 113 KGSTNAKELTEKGVRIWDANGSRQFLDKMGFTDREEGDLGPVYGFQWRHYGAEYSDMRKD 172

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+  ++  ++ +P  RR I+ AWN   +  M LPPCH L QFYV +G+LSCQL
Sbjct: 173 YTGQGVDQLQKVIDIIKTNPEDRRIIMCAWNPKDLPHMVLPPCHALCQFYVIDGELSCQL 232

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y+NH E   +QL R 
Sbjct: 233 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYSNHIEPLKVQLQRE 292

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R  P++ +   +  +  FR EDF +  Y PH  I  +++V
Sbjct: 293 IRPFPKLKLLRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 333


>gi|257898835|ref|ZP_05678488.1| thymidylate synthase [Enterococcus faecium Com15]
 gi|293570261|ref|ZP_06681330.1| thymidylate synthase [Enterococcus faecium E980]
 gi|257836747|gb|EEV61821.1| thymidylate synthase [Enterococcus faecium Com15]
 gi|291609668|gb|EFF38929.1| thymidylate synthase [Enterococcus faecium E980]
          Length = 315

 Score =  355 bits (912), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 150/315 (47%), Positives = 185/315 (58%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  EL
Sbjct: 1   MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84
           LWFL+GD+N+ YL ++   IWDEWA                                   
Sbjct: 61  LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLADPEFNEEYKKQ 120

Query: 85  ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                          +K G+LG IYG QWR W   DG  IDQI  ++++++  P SRR I
Sbjct: 121 SKLFCEKILTDDSFAEKYGDLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLI 180

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A
Sbjct: 181 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 240

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G + GEF+HTLGD HLY NH EQ   QLSR  R  P + +N     +  F  ED  L
Sbjct: 241 HETGLEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQL 300

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I A ++V
Sbjct: 301 EGYDPHPTIKAPIAV 315


>gi|126665225|ref|ZP_01736208.1| Thymidylate synthase [Marinobacter sp. ELB17]
 gi|126630595|gb|EBA01210.1| Thymidylate synthase [Marinobacter sp. ELB17]
          Length = 279

 Score =  355 bits (911), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 146/279 (52%), Positives = 191/279 (68%), Gaps = 15/279 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL++ ++  GS+R DRTGVGTRS FG Q+RF+L +GFPL+TTKK+H +S++ ELL
Sbjct: 1   MRAYLDLMQDIVDNGSNRGDRTGVGTRSVFGRQVRFNLQQGFPLVTTKKIHLRSIIQELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G ++ ++L    V+IW+EWA  +G+LGPIYG QWRSW   DG VIDQIS ++  +R
Sbjct: 61  WFLQGSTDNNWLTERKVNIWNEWALDNGDLGPIYGKQWRSWQCQDGRVIDQISDLIDQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR IVSAWN A +               MAL PCHCLFQFYV++GKLSCQLYQRS
Sbjct: 121 QKPNSRRLIVSAWNPAELPDESIGPQDNVRQGRMALAPCHCLFQFYVNDGKLSCQLYQRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD--LQLSRSPR 225
            D+FLG+PFNIASY+LLT M+A       GEF+HT GD HLY+NH        QL R PR
Sbjct: 181 ADLFLGVPFNIASYALLTHMIAQQCDLDVGEFVHTFGDCHLYSNHLTDDIVFEQLKREPR 240

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP+++I      +  +  +DF  + YEP+  I A +++
Sbjct: 241 ALPKLVIKRKPNSIFEYNLDDFAFKGYEPYPGIKAPIAI 279


>gi|314968970|gb|EFT13068.1| thymidylate synthase [Propionibacterium acnes HL037PA1]
          Length = 269

 Score =  355 bits (911), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 7/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG  IDQI+++V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPD-DGGTIDQIANVVEQIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA I +MALPPCH LFQFYV          LSCQLYQRSGD FLG+
Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269


>gi|195997697|ref|XP_002108717.1| hypothetical protein TRIADDRAFT_18453 [Trichoplax adhaerens]
 gi|190589493|gb|EDV29515.1| hypothetical protein TRIADDRAFT_18453 [Trichoplax adhaerens]
          Length = 317

 Score =  355 bits (911), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 124/284 (43%), Positives = 177/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L++ ++  G+ + DRTG GT+S FG QMRF L     PLLTTK+  W+ +  ELL
Sbjct: 34  YQYLRLIQRIMNEGNFKGDRTGTGTKSIFGAQMRFSLRDNQMPLLTTKRTFWRGIAEELL 93

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF++G +N + L+  G+  W+    ++            G+LGPIYG QWR +       
Sbjct: 94  WFVKGSTNANQLNEKGIKFWNANGSREFLDSRGLHEREVGDLGPIYGFQWRHFGAKYTNM 153

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ++ ++  ++  P  RR I+SAWN   + +MALPPCH   QFYV +G+LS
Sbjct: 154 HADYTGQGVDQLAEVIHKIKTSPNDRRIILSAWNPPDLPEMALPPCHAFVQFYVCDGRLS 213

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGD+ LG+PFNIASYSLLT M+A +   +  +F+HT+GD H+Y NHF+    QL
Sbjct: 214 CQLYQRSGDMGLGVPFNIASYSLLTHMIAHICDLEAEDFVHTIGDAHVYLNHFDALQEQL 273

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P+  P++     I D+  F+YEDF L+ Y+ H  I   ++V
Sbjct: 274 MREPKKFPKLNFKRKISDIDDFKYEDFELQDYQFHPTIKMDMAV 317


>gi|126650266|ref|ZP_01722494.1| thymidylate synthase [Bacillus sp. B14905]
 gi|126592916|gb|EAZ86898.1| thymidylate synthase [Bacillus sp. B14905]
          Length = 325

 Score =  355 bits (911), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 146/318 (45%), Positives = 186/318 (58%), Gaps = 57/318 (17%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V  ELLWF+
Sbjct: 8   YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL +H   IWDEWA                                       
Sbjct: 68  KGDTNIRYLLQHNNHIWDEWAFKKWVESDDYTGPDMTDFGRRCLVDDAFNTLYQQELASF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K GELG +YG QWR W    G  IDQ+  ++  ++ +P SRR IV+AW
Sbjct: 128 CERVLADDDFAQKYGELGNVYGKQWRHWTTSTGESIDQLQDVIHQIKHNPDSRRIIVNAW 187

Query: 134 NVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           N   +        K ALPPCH +FQFYV NGKLSCQL QRS D  LG PFNIASY+LLT 
Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVSNGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246
           ++A   G + GEFIH++GD H+Y NH EQ   QL+R P+ LP + INPN   +     ED
Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLAREPKELPTLHINPNKASIFDIELED 307

Query: 247 FTLRSYEPHAAILAKVSV 264
            ++  Y+PH AI A ++V
Sbjct: 308 LSIEGYDPHPAIKAPIAV 325


>gi|299537230|ref|ZP_07050533.1| thymidylate synthase [Lysinibacillus fusiformis ZC1]
 gi|298727471|gb|EFI68043.1| thymidylate synthase [Lysinibacillus fusiformis ZC1]
          Length = 325

 Score =  355 bits (911), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 147/318 (46%), Positives = 186/318 (58%), Gaps = 57/318 (17%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V  ELLWF+
Sbjct: 8   YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADK------------------------------------- 86
           +GD+N+ YL +H   IWDEWA K                                     
Sbjct: 68  KGDTNIRYLLQHNNHIWDEWAFKKWVESDEYTGPDMTDFGRRCLVDESFNALYQKELASF 127

Query: 87  -------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W   DG  +DQ+  ++  ++  P SRR IV+AW
Sbjct: 128 CERVLTDDDFAQQYGDLGNVYGKQWRHWTTSDGESLDQLQDVIHQIKHQPDSRRIIVNAW 187

Query: 134 NVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           N   +        K ALPPCH +FQFYV NGKLSCQL QRS D  LG PFNIASY+LLT 
Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVANGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246
           ++A   G + GEFIH++GD H+Y NH EQ   QLSR PR LP + INPN   +     ED
Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLSREPRNLPTLHINPNKASIFDIELED 307

Query: 247 FTLRSYEPHAAILAKVSV 264
            ++  Y+PH AI A ++V
Sbjct: 308 LSIEGYDPHPAIKAPIAV 325


>gi|90961685|ref|YP_535601.1| thymidylate synthase [Lactobacillus salivarius UCC118]
 gi|227890773|ref|ZP_04008578.1| thymidylate synthase [Lactobacillus salivarius ATCC 11741]
 gi|301300762|ref|ZP_07206946.1| thymidylate synthase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|123391358|sp|Q1WU17|TYSY_LACS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|90820879|gb|ABD99518.1| Thymidylate synthase [Lactobacillus salivarius UCC118]
 gi|227867182|gb|EEJ74603.1| thymidylate synthase [Lactobacillus salivarius ATCC 11741]
 gi|300214485|gb|ADJ78901.1| Thymidylate synthase (TS) (TSase) [Lactobacillus salivarius CECT
           5713]
 gi|300851612|gb|EFK79312.1| thymidylate synthase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 318

 Score =  355 bits (911), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 143/311 (45%), Positives = 190/311 (61%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+R +++ G ++ DRTG GT+S FGYQMRF+L++GFPLLTTKKV +  +  ELLWFL
Sbjct: 8   YLQLIRDILEKGHEKSDRTGTGTKSLFGYQMRFNLAEGFPLLTTKKVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L  H   IWDEWA                                       
Sbjct: 68  RGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRAQEDDNFNKVYQDEKKKF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      +K G LG +YG QWR W   +G  IDQI  ++++++ +P SRR IV+AW
Sbjct: 128 CQKIVEDQEFANKFGNLGDVYGAQWRHWQTRNGETIDQIKDVIETIKNNPDSRRMIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV++GKLSCQLYQRS DVFLG+PFNIASY+LLT M+A   G
Sbjct: 188 NPEDVPLSALPPCHTLFQFYVNDGKLSCQLYQRSADVFLGVPFNIASYALLTHMIARETG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y NH +Q + QL R P   P + +NP   +++ F  ED  +++Y 
Sbjct: 248 LEVGEFVHTLGDAHIYLNHLDQVNEQLQRKPNDAPTLWLNPEKKNIMDFEMEDIKVKNYH 307

Query: 254 PHAAILAKVSV 264
            H+AI A V+V
Sbjct: 308 SHSAIKAPVAV 318


>gi|195116595|ref|XP_002002839.1| GI10845 [Drosophila mojavensis]
 gi|193913414|gb|EDW12281.1| GI10845 [Drosophila mojavensis]
          Length = 310

 Score =  354 bits (910), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 134/285 (47%), Positives = 182/285 (63%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL++ +I+ G +R DRT VGTRS FG QMRF+L   FPLLTTK+V ++ V  EL+W
Sbjct: 26  EQYLDLIKRIIENGDERMDRTKVGTRSIFGAQMRFNLRDSFPLLTTKRVFFRGVAEELIW 85

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G ++   L    + IWD  + ++            G+LGP+YG QWR +        
Sbjct: 86  FIAGQTDAKILQEKNIHIWDGNSTREFLDKCGHTDREVGDLGPVYGFQWRHFGAKYGKCT 145

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159
            DY G  IDQ+  ++ ++R DP  RR I+SAWN   I +MALPPCHCL QFYV    G+L
Sbjct: 146 DDYTGQGIDQLKQVIDTIRNDPADRRIIMSAWNPLDIPQMALPPCHCLAQFYVSQSRGEL 205

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HTLGD H+YNNH      Q
Sbjct: 206 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTLGDAHVYNNHVNPLLEQ 265

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + R PR  P+++    + ++  FRYEDF +  Y P+  I  +++V
Sbjct: 266 MKREPRPFPKLVFKRQVTNIEDFRYEDFEIVGYNPYGKIQMEMAV 310


>gi|200003972|ref|YP_002221554.1| putatitve thymidylate synthase [Bacteroides phage B40-8]
 gi|198209669|gb|ACH81952.1| putatitve thymidylate synthase [Bacteroides phage B40-8]
          Length = 265

 Score =  354 bits (910), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 144/265 (54%), Positives = 180/265 (67%), Gaps = 1/265 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+  + +G  R DRTG GT S FG Q  +DL  GFPL+TTKKV  K ++HELL
Sbjct: 1   MKQYLDLLKETLNYGEKRSDRTGTGTISLFGLQRSYDLRDGFPLVTTKKVFTKGIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L+GD+N+ YL+ +GV IWD+WA   G+LG IYG QWR W       +DQI S++  ++
Sbjct: 61  WMLKGDTNIKYLNENGVHIWDDWAKPSGDLGRIYGKQWRDWRINSKMKVDQIDSVIDMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNIA 179
            +P SRR IVSAWNV  I  MALPPCHC FQFYV   G L  +LYQRS D+FLG+PFNIA
Sbjct: 121 FNPESRRLIVSAWNVGEIHMMALPPCHCFFQFYVSESGYLDLKLYQRSADLFLGVPFNIA 180

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           SYS+L  M A V G +   FIHT+GD H+Y NH EQ   QLSR P  LP++ +NPN+ ++
Sbjct: 181 SYSILLSMAAQVCGLKPRRFIHTIGDGHIYLNHVEQVKEQLSREPFALPKLELNPNVRNI 240

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F+YED  +  Y  H AI   V+V
Sbjct: 241 FDFKYEDIKIVDYNCHPAIKGDVAV 265


>gi|315640698|ref|ZP_07895800.1| thymidylate synthase [Enterococcus italicus DSM 15952]
 gi|315483453|gb|EFU73947.1| thymidylate synthase [Enterococcus italicus DSM 15952]
          Length = 315

 Score =  354 bits (910), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 148/315 (46%), Positives = 187/315 (59%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL R ++  G+ + DRTG GT+S FG+QMRFDLS+GFPLLTTK+V +  +  EL
Sbjct: 1   MEQAYLDLGRKILTEGNSKSDRTGTGTKSIFGHQMRFDLSEGFPLLTTKRVPFGLIKSEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84
           LWF++GD+N+ YL +H   IWDEWA                                   
Sbjct: 61  LWFIKGDTNIRYLLQHNNHIWDEWAFEKYVASDSYHGPDMTNFGRRSLEDDAFNEVYQNE 120

Query: 85  ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                          D+ G+LG IYG QWR W    G  IDQ+  ++  ++  P SRR I
Sbjct: 121 LAQFCERIVNDERFADEFGDLGHIYGYQWRHWDTAQGGFIDQLQDVIHQIKHTPDSRRMI 180

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV  GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A
Sbjct: 181 VSAWNPEDVPSMALPPCHTMFQFYVHEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIA 240

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
                Q GEF+HTLGD HLY NHF+Q   QL+RS R  P++++NP    +  F   D TL
Sbjct: 241 HETNLQVGEFVHTLGDAHLYMNHFDQMTEQLTRSVRPAPKLVLNPEKQSIFDFDVADITL 300

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I A ++V
Sbjct: 301 EGYDPHPTIKAPIAV 315


>gi|322383990|ref|ZP_08057720.1| thymidylate synthase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151467|gb|EFX44654.1| thymidylate synthase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 318

 Score =  354 bits (910), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 188/313 (60%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YL+L RHV++ G  + DRTG GT S FGYQMRF+L +GFPLLTTK++ ++ +V ELLW
Sbjct: 6   QAYLELCRHVLEHGEIKEDRTGTGTVSLFGYQMRFNLQEGFPLLTTKRIPFRLIVSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL  H   IWDEWA K                                   
Sbjct: 66  FIKGDTNIRYLLEHNNHIWDEWAFKHYVESSSYQGPDMTDFGLRSQRDEAFLIQYEEQMN 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G+LG +YG QWR+W   +G  IDQ+  I+ +++ +P SRR IVS
Sbjct: 126 KFTERILKDPQFALEFGDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  M LPPCH LFQFYV  G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 186 AWNPEDIPSMVLPPCHTLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHTLGD H+Y+NH +Q  LQLSR P+ LP + INP +  +      D  L  
Sbjct: 246 CGIEAGEFIHTLGDAHVYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+PH +I A V+V
Sbjct: 306 YDPHPSIKAPVAV 318


>gi|21702230|emb|CAD38046.1| dihydrofolate reductase-thymidylate synthase [Pisum sativum]
          Length = 530

 Score =  354 bits (910), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 130/283 (45%), Positives = 174/283 (61%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL+L++ +I  G+ + DRTG GT S FG QMRF+L +GFPLLTTK+V W+ VV ELLW
Sbjct: 248 YMYLNLVQEIISQGTSKGDRTGTGTLSKFGCQMRFNLRRGFPLLTTKRVFWRGVVEELLW 307

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G +N   L   G+ IWD+ A             ++G+LGP+YG QWR +        
Sbjct: 308 FISGSTNAKVLQEKGIHIWDDNASREFLDSIGLSEREEGDLGPVYGFQWRHFGARYTNMH 367

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++  ++ +P  RR I+SAWN A +  MALPPCH   QFYV NG+LSC
Sbjct: 368 NDYAGQGVDQLLDVINKVKHNPDDRRIILSAWNPADLKLMALPPCHMSAQFYVANGELSC 427

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+ QRS D+ LG+PFNIASY+LLT M+A +     G+FIH LGD H+Y  H      QL 
Sbjct: 428 QMNQRSADMGLGVPFNIASYALLTCMIAHICELVPGDFIHVLGDAHVYQTHVRPLQEQLH 487

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             P+  P + IN    D+ SF   DF L  Y+PH  I  K++V
Sbjct: 488 NLPKPFPTLKINSKKKDIDSFVATDFKLIDYDPHQKIEMKMAV 530


>gi|195454454|ref|XP_002074244.1| GK18389 [Drosophila willistoni]
 gi|194170329|gb|EDW85230.1| GK18389 [Drosophila willistoni]
          Length = 340

 Score =  354 bits (910), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 133/285 (46%), Positives = 183/285 (64%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDLLR +I+ G  R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V  ELLW
Sbjct: 56  EQYLDLLRSIIERGETRIDRTRVGTLSIFGSQMRFDMRESFPLLTTKRVFFRAVAEELLW 115

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F++G ++   L    V IWD  + ++            G+LGP+YG QWR +        
Sbjct: 116 FIKGKTDAKILQDKNVHIWDGNSTREFLDNLGFTDRAVGDLGPVYGFQWRHFGAEYRTCQ 175

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159
            DY G  +DQ+  ++++++ +P  RR I+SAWN   I KMALPPCHCL QFYV    G+L
Sbjct: 176 DDYTGQGVDQLRQVIETIKTNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQSRGEL 235

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y +H E    Q
Sbjct: 236 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLSHVEPIKEQ 295

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R+PR  P++     + D+  F YED  + +Y P+  I  +++V
Sbjct: 296 LKRTPRPFPKLAFKRQVTDIEDFTYEDIEVVNYNPYPKIQMEMAV 340


>gi|257887704|ref|ZP_05667357.1| thymidylate synthase [Enterococcus faecium 1,141,733]
 gi|257896198|ref|ZP_05675851.1| thymidylate synthase [Enterococcus faecium Com12]
 gi|293377199|ref|ZP_06623407.1| thymidylate synthase [Enterococcus faecium PC4.1]
 gi|257823758|gb|EEV50690.1| thymidylate synthase [Enterococcus faecium 1,141,733]
 gi|257832763|gb|EEV59184.1| thymidylate synthase [Enterococcus faecium Com12]
 gi|292644219|gb|EFF62321.1| thymidylate synthase [Enterococcus faecium PC4.1]
          Length = 315

 Score =  354 bits (909), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 150/315 (47%), Positives = 184/315 (58%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  EL
Sbjct: 1   MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84
           LWFL+GD+N+ YL ++   IWDEWA                                   
Sbjct: 61  LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSTDYNGPDMTDFGHRSLTDPEFNEEYKKQ 120

Query: 85  ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                          +K G LG IYG QWR W   DG  IDQI  ++++++  P SRR I
Sbjct: 121 SKLFCEKILTDDSFAEKYGNLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLI 180

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A
Sbjct: 181 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 240

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G + GEF+HTLGD HLY NH EQ   QLSR  R  P + +N     +  F  ED  L
Sbjct: 241 HETGLEVGEFVHTLGDAHLYINHIEQMKEQLSREVRAFPTLALNQEKQSVFDFEMEDIQL 300

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH  I A ++V
Sbjct: 301 EGYDPHPTIKAPIAV 315


>gi|168012488|ref|XP_001758934.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690071|gb|EDQ76440.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 520

 Score =  354 bits (909), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 133/283 (46%), Positives = 173/283 (61%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L+  +IK G+ + DRTG GT S FG QMRF+L K FPLLTTK+V W+ VV ELLW
Sbjct: 238 YQYLNLIDDIIKTGAVKGDRTGTGTISKFGCQMRFNLRKSFPLLTTKRVFWRGVVEELLW 297

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G +N   LH  GV IWD                ++G+LGP+YG QWR +        
Sbjct: 298 FISGSTNAKVLHDKGVKIWDGNGSREYLDKQGLTEREEGDLGPVYGFQWRHFGAKYVDMH 357

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ DP  RR ++SAWN A +  MALPPCH   QFYV NG+LSC
Sbjct: 358 ADYTGQGYDQLKDVINKIKTDPDDRRILLSAWNPADLKLMALPPCHMFAQFYVANGELSC 417

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT +LA V     G+F+H LGD H+Y NH E    QL 
Sbjct: 418 QMYQRSCDMGLGVPFNIASYALLTCILAHVCDLVPGDFVHVLGDAHVYKNHVEPLQEQLQ 477

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +P   P++ I     D+ SF   DF L  Y+ H  I   ++V
Sbjct: 478 NTPMPFPRLRIKTANRDIDSFVAADFELIGYKAHQKINMIMAV 520


>gi|315226195|ref|ZP_07867983.1| thymidylate synthase [Parascardovia denticolens DSM 10105]
 gi|315120327|gb|EFT83459.1| thymidylate synthase [Parascardovia denticolens DSM 10105]
          Length = 291

 Score =  354 bits (909), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 151/266 (56%), Positives = 193/266 (72%), Gaps = 6/266 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL R ++  GS + DRTG GT S FG QMRFDLS+ FPL+TTK V +K V +ELLWFL
Sbjct: 27  YEDLAREILMTGSLKSDRTGTGTISLFGKQMRFDLSRSFPLITTKSVWFKGVSYELLWFL 86

Query: 64  RGDSNVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQS 118
           +G SNV +L  + V IWDEWAD + GELGP+YGVQWRSWP    D     IDQI++++Q 
Sbjct: 87  KGSSNVRWLQENKVHIWDEWADPETGELGPVYGVQWRSWPAPTKDDSHRTIDQIANVLQM 146

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           ++ +P SRR IVSAWN A +++MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNI
Sbjct: 147 IKDNPDSRRMIVSAWNPAEVERMALPPCHALFQFYVADGRLSCQLYQRSADMFLGVPFNI 206

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           ASYSLLT M+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   PQ++++     
Sbjct: 207 ASYSLLTCMMAQQTGLEPGEFVWTGGDCHIYDNHVDQFLEQLSRQPYPYPQLVMD-KADS 265

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           L  ++YEDF + +Y+  A I A V+V
Sbjct: 266 LFDYQYEDFHVLNYQHGAKIAAPVAV 291


>gi|169828204|ref|YP_001698362.1| thymidylate synthase [Lysinibacillus sphaericus C3-41]
 gi|168992692|gb|ACA40232.1| Thymidylate synthase [Lysinibacillus sphaericus C3-41]
          Length = 325

 Score =  354 bits (909), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 146/318 (45%), Positives = 186/318 (58%), Gaps = 57/318 (17%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+LL+H+++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V +K V  ELLWF+
Sbjct: 8   YLNLLQHILENGTKKEDRTGTGTYSVFGYQMRFDLSKGFPLLTTKRVPFKLVASELLWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL +H   IWDEWA                                       
Sbjct: 68  KGDTNIRYLLQHNNHIWDEWAFKRWVESDDYTGPDMTDFGRRCLVDDAFNTMYQQELASF 127

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K GELG +YG QWR W    G  IDQ+  ++  ++ +P SRR IV+AW
Sbjct: 128 CERVLADDDFAQKYGELGNVYGKQWRHWSTSTGESIDQLQDVIHQIKHNPDSRRIIVNAW 187

Query: 134 NVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           N   +        K ALPPCH +FQFYV NGKLSCQL QRS D  LG PFNIASY+LLT 
Sbjct: 188 NPEDVINAGAKGSKAALPPCHVMFQFYVSNGKLSCQLMQRSLDTLLGCPFNIASYALLTH 247

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246
           ++A   G + GEFIH++GD H+Y NH EQ   QL+R P+ LP + INPN   +     ED
Sbjct: 248 LIAHECGLEVGEFIHSIGDAHIYANHVEQVKEQLAREPKDLPTLHINPNKTSIFDIELED 307

Query: 247 FTLRSYEPHAAILAKVSV 264
            ++  Y+PH AI A ++V
Sbjct: 308 LSIEGYDPHPAIKAPIAV 325


>gi|225023101|ref|ZP_03712293.1| hypothetical protein CORMATOL_03149 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944324|gb|EEG25533.1| hypothetical protein CORMATOL_03149 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 272

 Score =  354 bits (908), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 155/261 (59%), Positives = 192/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S F  Q+RFDL++ FPL+TTK+VH+ SVV ELLWFL
Sbjct: 13  YEDLLRKILAEGTHKNDRTGTGTTSLFAQQLRFDLAESFPLITTKQVHFHSVVGELLWFL 72

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            G SNV++L  +G+ IW+EWAD  GELGP+YGVQWRSWP  DG  +DQIS+ +  LRADP
Sbjct: 73  SGSSNVAWLQENGIRIWNEWADDQGELGPVYGVQWRSWPTPDGRYVDQISASLAMLRADP 132

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  + KMALPPCH LFQ YV + +LSCQ+YQRS D+FLG+PFNIASYSL
Sbjct: 133 DSRRNIVSAWNVGELPKMALPPCHLLFQLYVADNRLSCQVYQRSADMFLGVPFNIASYSL 192

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           L  MLA   G + GE I T GD H+Y+NH EQ  LQL+R PR  PQ+ +     DL S+ 
Sbjct: 193 LAHMLAQQAGLRVGELIWTGGDCHIYDNHREQVALQLTRDPRPYPQLEL-RKAADLFSYT 251

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + D  +R Y+PH  I A+VSV
Sbjct: 252 FSDVVVRGYDPHPRIPARVSV 272


>gi|332373384|gb|AEE61833.1| unknown [Dendroctonus ponderosae]
          Length = 320

 Score =  354 bits (908), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 134/284 (47%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL+ ++ +++ G    DRTGVGT S FG QMR+ L    FPLLTTK+V W++VV ELL
Sbjct: 37  HQYLNHIKLILEKGVKTADRTGVGTYSIFGAQMRYSLRDNIFPLLTTKRVFWRAVVEELL 96

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF+RG +N   L    V IWD  +             ++G+LGPIYG QWR +       
Sbjct: 97  WFIRGSTNAFELKDKNVHIWDANSTREFLDSVSLKDREEGDLGPIYGFQWRHFGAEYKGM 156

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    IDQ++ ++ ++R  P  RR I+ AWN   I +MALPPCHCL QFYV NG+LS
Sbjct: 157 RADYKNKGIDQLAHVINTIRNKPTDRRMIMCAWNPVDIPEMALPPCHCLVQFYVANGELS 216

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A +   Q GEFIH+LGD H+Y NH E    Q+
Sbjct: 217 CQLYQRSADMGLGVPFNIASYALLTYMIAHITNLQPGEFIHSLGDSHVYLNHVEPLKEQI 276

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P + I   +  +  F  EDF +  Y PH  +   ++V
Sbjct: 277 EREPRPFPTLQIKRKVETIEDFTAEDFEIVGYNPHPKLSMVMAV 320


>gi|163791087|ref|ZP_02185507.1| thymidylate synthase [Carnobacterium sp. AT7]
 gi|159873643|gb|EDP67727.1| thymidylate synthase [Carnobacterium sp. AT7]
          Length = 315

 Score =  353 bits (907), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 139/312 (44%), Positives = 190/312 (60%), Gaps = 50/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL+L R V++ G+++ DRTG GT+S FG+QMRF+L +GFPLLTTK+V +  +  ELLWF
Sbjct: 4   EYLNLARKVLEVGNEKTDRTGTGTKSLFGHQMRFNLQEGFPLLTTKRVPFSLIKSELLWF 63

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK------------------------------------ 86
           ++G++N+ YL +H   IWDEWA +                                    
Sbjct: 64  IKGNTNIRYLLQHNNHIWDEWAFERFVKSEDYKGPDMTNFGRKSLIDSEFNTLYLKEKEA 123

Query: 87  --------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                          GELG +YG QWR W    G  IDQ+  +++ ++  P SRR +VSA
Sbjct: 124 FCTRILEDETFALQYGELGNVYGAQWRKWKTTQGETIDQLKDVIKLIKTSPDSRRMLVSA 183

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   
Sbjct: 184 WNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAHET 243

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEF+HTLGD HLY+NH EQ + QL+R P+ LP +I+N +   +  F  +D  +  Y
Sbjct: 244 GLEVGEFVHTLGDAHLYSNHIEQINKQLAREPKELPTLILNSSKTSIFDFEMDDIKIEGY 303

Query: 253 EPHAAILAKVSV 264
           +PH  I A ++V
Sbjct: 304 DPHPGIKAPIAV 315


>gi|195161930|ref|XP_002021809.1| GL26706 [Drosophila persimilis]
 gi|194103609|gb|EDW25652.1| GL26706 [Drosophila persimilis]
          Length = 330

 Score =  353 bits (907), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 136/285 (47%), Positives = 182/285 (63%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL++++I  G  R DRT VGT S FG Q+RFD+   FPLLTTK+V +++VV EL+W
Sbjct: 46  QQYLDLIQYIIGNGERRIDRTNVGTLSVFGSQLRFDMRLSFPLLTTKRVFFRAVVEELIW 105

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G ++   L    V IWD  + ++            G+LGP+YG QWR +        
Sbjct: 106 FVGGKTDAKLLQAKNVHIWDGNSTREYLDKLGHTDRAVGDLGPVYGFQWRHFGAEYGTCD 165

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159
            DY G  IDQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QFYV    G+L
Sbjct: 166 DDYSGKGIDQLRQVIDTIRHNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGEL 225

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+FIHT+GD H+Y NH +    Q
Sbjct: 226 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKTGDFIHTMGDAHVYLNHVDPLKEQ 285

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R PR  P++ I   + ++  FRYEDF +  YEP+  I   ++V
Sbjct: 286 LKRKPRPFPKLNIKRQVENIEDFRYEDFEIIGYEPYPKIKMDMAV 330


>gi|294786608|ref|ZP_06751862.1| thymidylate synthase [Parascardovia denticolens F0305]
 gi|294485441|gb|EFG33075.1| thymidylate synthase [Parascardovia denticolens F0305]
          Length = 289

 Score =  353 bits (907), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 151/266 (56%), Positives = 193/266 (72%), Gaps = 6/266 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL R ++  GS + DRTG GT S FG QMRFDLS+ FPL+TTK V +K V +ELLWFL
Sbjct: 25  YEDLAREILMTGSLKSDRTGTGTISLFGKQMRFDLSRSFPLITTKSVWFKGVSYELLWFL 84

Query: 64  RGDSNVSYLHRHGVSIWDEWAD-KDGELGPIYGVQWRSWP----DYDGNVIDQISSIVQS 118
           +G SNV +L  + V IWDEWAD + GELGP+YGVQWRSWP    D     IDQI++++Q 
Sbjct: 85  KGSSNVRWLQENKVHIWDEWADPETGELGPVYGVQWRSWPAPTKDDSHRTIDQIANVLQM 144

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           ++ +P SRR IVSAWN A +++MALPPCH LFQFYV +G+LSCQLYQRS D+FLG+PFNI
Sbjct: 145 IKDNPDSRRMIVSAWNPAEVERMALPPCHALFQFYVADGRLSCQLYQRSADMFLGVPFNI 204

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           ASYSLLT M+A   G + GEF+ T GD H+Y+NH +Q   QLSR P   PQ++++     
Sbjct: 205 ASYSLLTCMMAQQTGLEPGEFVWTGGDCHIYDNHVDQFLEQLSRQPYPYPQLVMD-KADS 263

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           L  ++YEDF + +Y+  A I A V+V
Sbjct: 264 LFDYQYEDFHVLNYQHGAKIAAPVAV 289


>gi|305681854|ref|ZP_07404658.1| thymidylate synthase [Corynebacterium matruchotii ATCC 14266]
 gi|305658327|gb|EFM47830.1| thymidylate synthase [Corynebacterium matruchotii ATCC 14266]
          Length = 272

 Score =  353 bits (907), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 156/261 (59%), Positives = 192/261 (73%), Gaps = 1/261 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLLR ++  G+ + DRTG GT S F  Q+RFDL++ FPL+TTK+VH+ SVV ELLWFL
Sbjct: 13  YEDLLRKILAEGTHKNDRTGTGTTSLFAQQLRFDLAESFPLITTKQVHFHSVVGELLWFL 72

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            G SNV++L  +G+ IW+EWAD  GELGP+YGVQWRSWP  DG  +DQIS+ +  LRADP
Sbjct: 73  SGSSNVAWLQENGIRIWNEWADDQGELGPVYGVQWRSWPTPDGGYVDQISASLAMLRADP 132

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR+IVSAWNV  + KMALPPCH LFQ YV + +LSCQ+YQRS D+FLG+PFNIASYSL
Sbjct: 133 DSRRNIVSAWNVGELPKMALPPCHLLFQLYVADNRLSCQVYQRSADMFLGVPFNIASYSL 192

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT MLA   G + GE I T GD H+Y+NH EQ  LQL+R PR  PQ+ +     DL S+ 
Sbjct: 193 LTHMLAQQAGLRVGELIWTGGDCHIYDNHREQVALQLTRDPRPYPQLEL-RKAADLFSYT 251

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
           + D  +R Y PH  I A+VSV
Sbjct: 252 FSDVAVRGYNPHPRIPARVSV 272


>gi|50843135|ref|YP_056362.1| thymidylate synthase [Propionibacterium acnes KPA171202]
 gi|282855010|ref|ZP_06264342.1| thymidylate synthase [Propionibacterium acnes J139]
 gi|62901287|sp|Q6A761|TYSY_PROAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|50840737|gb|AAT83404.1| thymidylate synthase [Propionibacterium acnes KPA171202]
 gi|282581598|gb|EFB86983.1| thymidylate synthase [Propionibacterium acnes J139]
 gi|313763382|gb|EFS34746.1| thymidylate synthase [Propionibacterium acnes HL013PA1]
 gi|313814694|gb|EFS52408.1| thymidylate synthase [Propionibacterium acnes HL059PA1]
 gi|313828240|gb|EFS65954.1| thymidylate synthase [Propionibacterium acnes HL063PA2]
 gi|314914540|gb|EFS78371.1| thymidylate synthase [Propionibacterium acnes HL005PA4]
 gi|314917608|gb|EFS81439.1| thymidylate synthase [Propionibacterium acnes HL050PA1]
 gi|314919636|gb|EFS83467.1| thymidylate synthase [Propionibacterium acnes HL050PA3]
 gi|314930291|gb|EFS94122.1| thymidylate synthase [Propionibacterium acnes HL067PA1]
 gi|314956850|gb|EFT01004.1| thymidylate synthase [Propionibacterium acnes HL027PA1]
 gi|314957647|gb|EFT01750.1| thymidylate synthase [Propionibacterium acnes HL002PA1]
 gi|314967396|gb|EFT11495.1| thymidylate synthase [Propionibacterium acnes HL082PA2]
 gi|314982115|gb|EFT26208.1| thymidylate synthase [Propionibacterium acnes HL110PA3]
 gi|315090354|gb|EFT62330.1| thymidylate synthase [Propionibacterium acnes HL110PA4]
 gi|315093637|gb|EFT65613.1| thymidylate synthase [Propionibacterium acnes HL060PA1]
 gi|315098007|gb|EFT69983.1| thymidylate synthase [Propionibacterium acnes HL059PA2]
 gi|315102647|gb|EFT74623.1| thymidylate synthase [Propionibacterium acnes HL046PA1]
 gi|315104462|gb|EFT76438.1| thymidylate synthase [Propionibacterium acnes HL050PA2]
 gi|315106205|gb|EFT78181.1| thymidylate synthase [Propionibacterium acnes HL030PA1]
 gi|315110462|gb|EFT82438.1| thymidylate synthase [Propionibacterium acnes HL030PA2]
 gi|327325477|gb|EGE67281.1| thymidylate synthase [Propionibacterium acnes HL103PA1]
 gi|327451226|gb|EGE97880.1| thymidylate synthase [Propionibacterium acnes HL087PA3]
 gi|327452583|gb|EGE99237.1| thymidylate synthase [Propionibacterium acnes HL083PA2]
 gi|328754777|gb|EGF68393.1| thymidylate synthase [Propionibacterium acnes HL087PA1]
          Length = 269

 Score =  353 bits (907), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 159/270 (58%), Positives = 199/270 (73%), Gaps = 7/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG  IDQI+++V+ +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVEQIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA I +MALPPCH LFQFYV          LSCQLYQRSGD FLG+
Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269


>gi|116492833|ref|YP_804568.1| thymidylate synthase [Pediococcus pentosaceus ATCC 25745]
 gi|122265703|sp|Q03F96|TYSY_PEDPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116102983|gb|ABJ68126.1| thymidylate synthase [Pediococcus pentosaceus ATCC 25745]
          Length = 316

 Score =  353 bits (907), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 144/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R+V++ G  + DRT  GT STFGYQMRFDLS+GFPLLTTK+V +  +  ELLW
Sbjct: 4   EQYLNLERYVLENGHLKGDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FL+GD+N+ YL +H   IWDEW                                      
Sbjct: 64  FLKGDTNIRYLLQHNNHIWDEWAFKKWVESDEYQGPDMTDFGHRSLTDPEFNELYKIEKQ 123

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       + K G+LG +YG QWR+W    G  IDQIS+++  ++ +P SRR IVS
Sbjct: 124 RFTEQILEDDTFSAKYGDLGNVYGSQWRAWKTSTGETIDQISNVIDMIKNNPNSRRMIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTSALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYALLTELIAKA 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT+GD H+Y+NH +Q   QL R+PR  P++        +  +   D  +  
Sbjct: 244 TGLEVGEFIHTIGDAHIYSNHLDQVKEQLERTPRPAPKLKFKQVHDSIFDYEPGDIVVEG 303

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I A V+V
Sbjct: 304 YDPHPTIKAPVAV 316


>gi|237748057|ref|ZP_04578537.1| thymidylate synthetase [Oxalobacter formigenes OXCC13]
 gi|229379419|gb|EEO29510.1| thymidylate synthetase [Oxalobacter formigenes OXCC13]
          Length = 277

 Score =  353 bits (907), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 145/276 (52%), Positives = 196/276 (71%), Gaps = 14/276 (5%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+LL+ ++  G D+ DRTG GTR+ FG  MR DL  G PLLTTK++H +S++HELLW
Sbjct: 3   RQYLNLLQEILDCGIDKGDRTGTGTRAVFGRMMRHDLKNGLPLLTTKRLHIRSIIHELLW 62

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G +NV YL+ + V+IWDEWA ++GELGPIYG QWR+W   DG +IDQ++ ++ S+R 
Sbjct: 63  FLQGGTNVQYLNENKVTIWDEWATENGELGPIYGAQWRAWEGSDGRIIDQVAGVIDSIRT 122

Query: 122 DPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +P SRRHI+SAWNVAL+              KMAL PCH ++QF V  G+LSC + QRSG
Sbjct: 123 NPDSRRHIISAWNVALLPSEKMSPQENVRAGKMALAPCHVMYQFQVAAGRLSCMMTQRSG 182

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+FLGIP+N AS + LT M+A     + GE IH++GD+HLY NHF+QA LQLSR PR LP
Sbjct: 183 DIFLGIPYNTASTAFLTHMIAQQCDLEPGEIIHSIGDLHLYTNHFDQAKLQLSREPRALP 242

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            + ++     +  +R+EDF +  Y+PH AI A ++V
Sbjct: 243 TLKLD-KKPSIFDYRFEDFEVIGYDPHPAIAAPIAV 277


>gi|71066565|ref|YP_265292.1| thymidylate synthase [Psychrobacter arcticus 273-4]
 gi|71039550|gb|AAZ19858.1| thymidylate synthase [Psychrobacter arcticus 273-4]
          Length = 300

 Score =  353 bits (906), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 148/279 (53%), Positives = 199/279 (71%), Gaps = 16/279 (5%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLLR V+  G+++ DRTG GT S FG Q+RFDL+ GFPLLTTKKVH+KS+++ELLW
Sbjct: 22  QAYLDLLRLVLSEGTEKGDRTGTGTVSHFGAQLRFDLADGFPLLTTKKVHFKSIIYELLW 81

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP-------DYD 105
           FL G ++V YL ++GV IW+EWA  +         G+LGPIYG QWR++         YD
Sbjct: 82  FLSGSTHVDYLQQNGVRIWNEWATAEQTARFKRLAGDLGPIYGHQWRNYGATKVEDGSYD 141

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            +  DQIS +++ ++ +P SRR IVS WN    +++ALPPCH +FQF+V + KLSCQLYQ
Sbjct: 142 NDGFDQISQVIEQIKTNPNSRRLIVSGWNPGEAEQVALPPCHTMFQFFVADNKLSCQLYQ 201

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D+FLG+PFNIASY+LLT M+A V   + GEFI T GD H+Y NH EQ +LQL+R   
Sbjct: 202 RSADLFLGVPFNIASYALLTHMVAQVCDLEVGEFIWTGGDCHIYQNHREQVELQLTRELY 261

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           TLP + +NP++ D+ +F Y+D ++  YE H AI A+V+V
Sbjct: 262 TLPTLTLNPDVQDIFAFNYDDISVNGYESHPAIKAQVAV 300


>gi|295396869|ref|ZP_06806997.1| thymidylate synthase [Aerococcus viridans ATCC 11563]
 gi|294974895|gb|EFG50594.1| thymidylate synthase [Aerococcus viridans ATCC 11563]
          Length = 317

 Score =  353 bits (906), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 148/313 (47%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLD L+H++  G D+ DRTGVGTRS FGYQMRFDLS+GFPLLTTKKV +  +  ELLW
Sbjct: 5   KQYLDFLQHILDNGQDKSDRTGVGTRSVFGYQMRFDLSEGFPLLTTKKVPFGLIKSELLW 64

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL+GD+N+ YL  +   IWDEWA                                     
Sbjct: 65  FLKGDTNIRYLLENNNHIWDEWAFKRWVESDAYQGPDMTDFGLRADADPEFKKVYQEVKQ 124

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         + GELG +YG QWR W   +G+ IDQI++I+  L+ +P SRR I+S
Sbjct: 125 AFCQRVLEDDDFAREFGELGNVYGKQWRHWETREGDSIDQIANIIDQLKHNPDSRRIILS 184

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH + QFYV +GKLSCQLYQRSGD FLG+PFNIASY+LLT +LA  
Sbjct: 185 AWNPEDVPDMALPPCHTMSQFYVQDGKLSCQLYQRSGDAFLGVPFNIASYALLTHLLARE 244

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + G+++HT GD H+YNNHF Q   QLSR P  LP + I      +     +D  ++ 
Sbjct: 245 AGLEVGDYVHTFGDAHIYNNHFNQVYEQLSRQPLDLPTLEIGGEGKSIFDLEKDDIKVKG 304

Query: 252 YEPHAAILAKVSV 264
           Y+ H AI A V+V
Sbjct: 305 YKAHDAIKAPVAV 317


>gi|225717296|gb|ACO14494.1| Thymidylate synthase [Esox lucius]
          Length = 319

 Score =  353 bits (906), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 125/281 (44%), Positives = 173/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+   ++++ G  + DRTG G  S FG Q R+ L   FPLLTTK+V WK ++ ELLWF+
Sbjct: 39  YLNQCEYILQHGHRKGDRTGTGVISVFGSQARYSLRDQFPLLTTKRVFWKGILEELLWFI 98

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103
           +G +N   L   GV IWD    +D            G+LGP+YG QW  +         D
Sbjct: 99  KGSTNAKGLSEKGVKIWDANGSRDFLDKMGFTDREEGDLGPVYGFQWWHFGAEYSNMHTD 158

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G  +DQ+ +++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV +G+LSCQL
Sbjct: 159 YTGKGVDQLQNVIDTIKTNPEDRRIIMCAWNPKDLPHMALPPCHALCQFYVIDGELSCQL 218

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R 
Sbjct: 219 YQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYINHVEPLKVQLQRE 278

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R  P++ I   +  +  FR EDF +  Y PH  I  +++V
Sbjct: 279 IRPFPKLKILRTVEKIDDFRAEDFEIVDYNPHPTIKMQMAV 319


>gi|69246745|ref|ZP_00604093.1| Thymidylate synthase [Enterococcus faecium DO]
 gi|314938020|ref|ZP_07845330.1| thymidylate synthase [Enterococcus faecium TX0133a04]
 gi|314941994|ref|ZP_07848855.1| thymidylate synthase [Enterococcus faecium TX0133C]
 gi|314948753|ref|ZP_07852125.1| thymidylate synthase [Enterococcus faecium TX0082]
 gi|314951771|ref|ZP_07854810.1| thymidylate synthase [Enterococcus faecium TX0133A]
 gi|314991822|ref|ZP_07857280.1| thymidylate synthase [Enterococcus faecium TX0133B]
 gi|314995863|ref|ZP_07860950.1| thymidylate synthase [Enterococcus faecium TX0133a01]
 gi|68195099|gb|EAN09559.1| Thymidylate synthase [Enterococcus faecium DO]
 gi|313589967|gb|EFR68812.1| thymidylate synthase [Enterococcus faecium TX0133a01]
 gi|313593633|gb|EFR72478.1| thymidylate synthase [Enterococcus faecium TX0133B]
 gi|313596050|gb|EFR74895.1| thymidylate synthase [Enterococcus faecium TX0133A]
 gi|313599246|gb|EFR78091.1| thymidylate synthase [Enterococcus faecium TX0133C]
 gi|313642595|gb|EFS07175.1| thymidylate synthase [Enterococcus faecium TX0133a04]
 gi|313644819|gb|EFS09399.1| thymidylate synthase [Enterococcus faecium TX0082]
          Length = 324

 Score =  353 bits (906), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 150/315 (47%), Positives = 185/315 (58%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  EL
Sbjct: 10  MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86
           LWFL+GD+N+ YL ++   IWDEWA +                                 
Sbjct: 70  LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQ 129

Query: 87  -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                             G+LG IYG QWR W   DG  IDQI  ++++++  P SRR I
Sbjct: 130 SKLFCEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKQVIEAIKKTPDSRRLI 189

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A
Sbjct: 190 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 249

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G   GEF+HTLGD HLY NH EQ   QLSR  R  P +++N     +  F  ED  L
Sbjct: 250 HETGLAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQL 309

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH AI A ++V
Sbjct: 310 EGYDPHPAIKAPIAV 324


>gi|305664605|ref|YP_003860892.1| thymidylate synthase [Maribacter sp. HTCC2170]
 gi|88708622|gb|EAR00858.1| thymidylate synthase [Maribacter sp. HTCC2170]
          Length = 274

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 160/277 (57%), Positives = 206/277 (74%), Gaps = 16/277 (5%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DLL+ V+K G  + DRTG GT S FG+QMRFDLS+GFP++TTKK+H KS+VHELL
Sbjct: 1   MKQYHDLLKQVLKDGCQKGDRTGTGTLSVFGHQMRFDLSEGFPMVTTKKLHLKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N++YL  +GV IW+EWAD+ G+LGP+YG QWR+W   +   IDQI  +V SL+
Sbjct: 61  WFLKGETNIAYLQENGVRIWNEWADEKGDLGPVYGHQWRNW---NSEEIDQIKEVVHSLK 117

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +VSAWN +++              K ALPPCH  FQFYV +GKLSCQLYQRS
Sbjct: 118 NNPNSRRMLVSAWNPSVLPDTSKSFSENVGNGKAALPPCHAFFQFYVADGKLSCQLYQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG+PFNIASY+L TMM+A V G++ GEFIH  GD H+YNNH EQ +LQLSR PR L
Sbjct: 178 ADIFLGVPFNIASYALFTMMMAQVCGYEPGEFIHAFGDAHIYNNHMEQVELQLSREPRPL 237

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+M+INP + D+  F+++DF+L  Y PH  I   V+V
Sbjct: 238 PKMVINPEVKDIFDFKFDDFSLVDYNPHPHIKGVVAV 274


>gi|93007138|ref|YP_581575.1| thymidylate synthase [Psychrobacter cryohalolentis K5]
 gi|123264366|sp|Q1Q8B2|TYSY_PSYCK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|92394816|gb|ABE76091.1| thymidylate synthase [Psychrobacter cryohalolentis K5]
          Length = 290

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 151/279 (54%), Positives = 198/279 (70%), Gaps = 16/279 (5%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLLR V+  G+++ DRTG GT S FG Q+RF+L+ GFPLLTTKKVH KS+ +ELLW
Sbjct: 12  QAYLDLLRLVLNEGTEKGDRTGTGTLSHFGAQLRFNLADGFPLLTTKKVHLKSITYELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP---DYDGN-- 107
           FL G ++V YL ++GV IW+EWA  +         G+LGPIYG QWR++      DG   
Sbjct: 72  FLNGSTHVDYLQQNGVRIWNEWATSEQTARFNRPAGDLGPIYGHQWRNYGATTTADGQYN 131

Query: 108 --VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI+ +V+ ++ +P SRR IVS WN    D++ALPPCH LFQF+V + KLSCQLYQ
Sbjct: 132 SDGVDQIAQVVEQIKTNPNSRRLIVSGWNPGEADQVALPPCHTLFQFFVADNKLSCQLYQ 191

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D+FLG+PFNIASY++LT M+A V   + GEFI T GD H+Y NH EQ +LQL+RS  
Sbjct: 192 RSADLFLGVPFNIASYAMLTHMVAQVCNLEVGEFIWTGGDCHIYQNHREQVELQLTRSLY 251

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           TLP + +NPN+ D+ +F YED ++  YE H AI A+V+V
Sbjct: 252 TLPTLALNPNVKDIFAFNYEDISVDGYESHPAIKAQVAV 290


>gi|157135461|ref|XP_001663452.1| bifunctional dihydrofolate reductase-thymidylate synthase [Aedes
           aegypti]
 gi|108870229|gb|EAT34454.1| bifunctional dihydrofolate reductase-thymidylate synthase [Aedes
           aegypti]
          Length = 313

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 130/283 (45%), Positives = 174/283 (61%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYL+ ++ +I  G  R DRTGVGT S FG QMR+ L     PLLTTK+V ++ V  ELLW
Sbjct: 31  QYLEAIQRIIDTGDKRVDRTGVGTLSIFGTQMRYSLRDNVIPLLTTKRVFFRGVAEELLW 90

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG +N   L    V IWD  + ++            G+LGP+YG QWR +        
Sbjct: 91  FIRGSTNAKDLQAKNVHIWDGNSTREFLDASGFTDRDEGDLGPVYGFQWRHFGAKYKTCN 150

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  IDQ++ ++  ++ +P  RR I+SAWN   I +MALPPCHCL QF+V NG+LSC
Sbjct: 151 DDYTGQGIDQLAEVINRIKTNPTDRRIIMSAWNPIDIPQMALPPCHCLAQFFVANGELSC 210

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASY+LLT M+A V G + GEFIHT GD H+Y NH E    QL 
Sbjct: 211 QLYQRSADMGLGVPFNIASYALLTHMMAHVTGLKAGEFIHTTGDTHVYLNHVEPLKEQLQ 270

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P+  P +    ++  +  F   DF +  Y+P+  I  +++V
Sbjct: 271 RVPKRFPTLQFKRHVQSIDEFEMGDFEVCGYDPYPTIKMQMAV 313


>gi|314924266|gb|EFS88097.1| thymidylate synthase [Propionibacterium acnes HL001PA1]
          Length = 269

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 159/270 (58%), Positives = 198/270 (73%), Gaps = 7/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +LH + + IWDEWAD++G+LGP+YG QWRSWPD DG  IDQI+++V  +R
Sbjct: 61  WFLRGDTNVGWLHDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVDQIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA I +MALPPCH LFQFYV          LSCQLYQRSGD FLG+
Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269


>gi|241781388|ref|XP_002400276.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
 gi|215510710|gb|EEC20163.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
          Length = 287

 Score =  353 bits (905), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 136/284 (47%), Positives = 181/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL  L+H+++ G  ++DRTGVGT S FG Q R+ L  G  PLLTTK+V W+ VV ELL
Sbjct: 4   YQYLKTLKHILENGKKKKDRTGVGTMSIFGVQCRYSLRNGTMPLLTTKRVFWRGVVEELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG ++   L   G+ IWD+               ++G+LGP+YG QWR +       
Sbjct: 64  WFLRGSTDAKELSERGIHIWDQNGSRRFLDSLGFFDREEGDLGPVYGFQWRHFGATYRNS 123

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    +DQI+ +V+ ++ DP  RR I+ +WN   I KM LPPCHCL QFYVD+ +LS
Sbjct: 124 HTDYGNEGVDQITRLVEIIKNDPNDRRMILCSWNPTDIKKMVLPPCHCLAQFYVDDDELS 183

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V G + GEF+H LGD H+Y NH E    QL
Sbjct: 184 CQLYQRSADMGLGVPFNIASYALLTHMMAKVTGKRPGEFVHNLGDAHIYLNHVESVKQQL 243

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I  ++ D+  FR +DF L  Y P+  I  ++SV
Sbjct: 244 EREPRPFPKLRIRRDVTDIFDFRCDDFELIDYNPYPKIKMEMSV 287


>gi|313618225|gb|EFR90295.1| thymidylate synthase [Listeria innocua FSL S4-378]
          Length = 314

 Score =  353 bits (905), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKARILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|257884869|ref|ZP_05664522.1| thymidylate synthase [Enterococcus faecium 1,231,501]
 gi|261207592|ref|ZP_05922277.1| thymidylate synthase [Enterococcus faecium TC 6]
 gi|289565104|ref|ZP_06445557.1| thymidylate synthase [Enterococcus faecium D344SRF]
 gi|293556751|ref|ZP_06675314.1| thymidylate synthase [Enterococcus faecium E1039]
 gi|294614834|ref|ZP_06694729.1| thymidylate synthase [Enterococcus faecium E1636]
 gi|294617513|ref|ZP_06697144.1| thymidylate synthase [Enterococcus faecium E1679]
 gi|257820707|gb|EEV47855.1| thymidylate synthase [Enterococcus faecium 1,231,501]
 gi|260077975|gb|EEW65681.1| thymidylate synthase [Enterococcus faecium TC 6]
 gi|289163111|gb|EFD10958.1| thymidylate synthase [Enterococcus faecium D344SRF]
 gi|291592296|gb|EFF23910.1| thymidylate synthase [Enterococcus faecium E1636]
 gi|291596253|gb|EFF27515.1| thymidylate synthase [Enterococcus faecium E1679]
 gi|291601083|gb|EFF31372.1| thymidylate synthase [Enterococcus faecium E1039]
          Length = 315

 Score =  353 bits (905), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 150/315 (47%), Positives = 185/315 (58%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  EL
Sbjct: 1   MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86
           LWFL+GD+N+ YL ++   IWDEWA +                                 
Sbjct: 61  LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQ 120

Query: 87  -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                             G+LG IYG QWR W   DG  IDQI  ++++++  P SRR I
Sbjct: 121 SKLFCEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKEVIEAIKKTPDSRRLI 180

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A
Sbjct: 181 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 240

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G   GEF+HTLGD HLY NH EQ   QLSR  R  P +++N     +  F  ED  L
Sbjct: 241 HETGLAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQL 300

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH AI A ++V
Sbjct: 301 EGYDPHPAIKAPIAV 315


>gi|257878008|ref|ZP_05657661.1| thymidylate synthase [Enterococcus faecium 1,230,933]
 gi|257881206|ref|ZP_05660859.1| thymidylate synthase [Enterococcus faecium 1,231,502]
 gi|257889793|ref|ZP_05669446.1| thymidylate synthase [Enterococcus faecium 1,231,410]
 gi|257892270|ref|ZP_05671923.1| thymidylate synthase [Enterococcus faecium 1,231,408]
 gi|258616504|ref|ZP_05714274.1| thymidylate synthase [Enterococcus faecium DO]
 gi|260559058|ref|ZP_05831244.1| thymidylate synthase [Enterococcus faecium C68]
 gi|293563409|ref|ZP_06677858.1| thymidylate synthase [Enterococcus faecium E1162]
 gi|293568067|ref|ZP_06679405.1| thymidylate synthase [Enterococcus faecium E1071]
 gi|294622290|ref|ZP_06701333.1| thymidylate synthase [Enterococcus faecium U0317]
 gi|257812236|gb|EEV40994.1| thymidylate synthase [Enterococcus faecium 1,230,933]
 gi|257816864|gb|EEV44192.1| thymidylate synthase [Enterococcus faecium 1,231,502]
 gi|257826153|gb|EEV52779.1| thymidylate synthase [Enterococcus faecium 1,231,410]
 gi|257828649|gb|EEV55256.1| thymidylate synthase [Enterococcus faecium 1,231,408]
 gi|260074815|gb|EEW63131.1| thymidylate synthase [Enterococcus faecium C68]
 gi|291589288|gb|EFF21098.1| thymidylate synthase [Enterococcus faecium E1071]
 gi|291598182|gb|EFF29280.1| thymidylate synthase [Enterococcus faecium U0317]
 gi|291604670|gb|EFF34155.1| thymidylate synthase [Enterococcus faecium E1162]
          Length = 315

 Score =  353 bits (905), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 150/315 (47%), Positives = 185/315 (58%), Gaps = 51/315 (16%)

Query: 1   MHQ-YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q YLDL R +++ G  + DRTG GT S FGYQMRFDL KGFPLLTTK+V +  +  EL
Sbjct: 1   MEQAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK--------------------------------- 86
           LWFL+GD+N+ YL ++   IWDEWA +                                 
Sbjct: 61  LWFLKGDTNIRYLLQNKNHIWDEWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQ 120

Query: 87  -----------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                             G+LG IYG QWR W   DG  IDQI  ++++++  P SRR I
Sbjct: 121 SKLFCEKILTDDSFAETYGDLGHIYGYQWRHWETKDGGFIDQIKQVIEAIKKTPDSRRLI 180

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH +FQFYV  G+LSCQLYQRSGDVFLG+PFNIASY+LLT ++A
Sbjct: 181 VSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALLTHLIA 240

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G   GEF+HTLGD HLY NH EQ   QLSR  R  P +++N     +  F  ED  L
Sbjct: 241 HETGLAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQL 300

Query: 250 RSYEPHAAILAKVSV 264
             Y+PH AI A ++V
Sbjct: 301 EGYDPHPAIKAPIAV 315


>gi|257453633|ref|ZP_05618923.1| thymidylate synthase [Enhydrobacter aerosaccus SK60]
 gi|257449091|gb|EEV24044.1| thymidylate synthase [Enhydrobacter aerosaccus SK60]
          Length = 286

 Score =  353 bits (905), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 150/279 (53%), Positives = 194/279 (69%), Gaps = 16/279 (5%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ V+  G  + DRTG GT S FG QMRFDL +GFPLLTTKK+H KSV++ELLW
Sbjct: 8   QAYLDLLKLVLDNGIQKGDRTGTGTISYFGAQMRFDLQEGFPLLTTKKIHTKSVIYELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA---------DKDGELGPIYGVQWRSWPDYDG------ 106
           FL+GD++V YL  +GV IW+EWA           +GELG +YG QWR++           
Sbjct: 68  FLKGDTHVQYLQDNGVRIWNEWATAEQTARFGKPEGELGAVYGHQWRNFGASKKADGSYH 127

Query: 107 -NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            +  DQIS +V  ++ +P SRR IVS WN    +++ALPPCH LFQF+V +GKLSCQLYQ
Sbjct: 128 SDGFDQISWVVNEIKNNPNSRRLIVSGWNPLEANEVALPPCHTLFQFFVADGKLSCQLYQ 187

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D+FLG+PFNIASY+LLT M+A V G   GEF+ T GD H+YNNH +Q D QLSR P 
Sbjct: 188 RSADLFLGVPFNIASYALLTHMIAHVTGLGVGEFVWTGGDCHIYNNHLQQVDEQLSREPF 247

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP++ +NP+I D+ +F + D  + +Y+ HA I A+VSV
Sbjct: 248 ALPKLWLNPDITDIFAFDFNDIKIENYQSHATIKAEVSV 286


>gi|313123489|ref|YP_004033748.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280052|gb|ADQ60771.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|325684319|gb|EGD26489.1| thymidylate synthase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 318

 Score =  353 bits (905), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V +  +  ELLW
Sbjct: 6   QAYLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQ 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   DG  IDQI+ +++ ++ +P SRR IV+
Sbjct: 126 KFCQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHF Q + QL R+P   P + +NP    +  F   D  L +
Sbjct: 246 TGLEVGEFVHTIGDAHIYKNHFAQVEEQLKRTPFDAPTLWLNPEKKKVADFEMADIKLVN 305

Query: 252 YEPHAAILAKVSV 264
           Y+  + I A V+V
Sbjct: 306 YQHGSTIKAPVAV 318


>gi|16801054|ref|NP_471322.1| thymidylate synthase [Listeria innocua Clip11262]
 gi|22096226|sp|Q92AD4|TYSY_LISIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|16414489|emb|CAC97218.1| lin1988 [Listeria innocua Clip11262]
          Length = 314

 Score =  352 bits (904), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|224080379|ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
 gi|222849082|gb|EEE86629.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
          Length = 528

 Score =  352 bits (904), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 126/281 (44%), Positives = 172/281 (61%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL +++ +I  G+ + DRTG GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 248 YLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFPLLTTKKVFWRGVVEELLWFI 307

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G ++   L   G+ IWD  A             ++G+LGP+YG QWR +         D
Sbjct: 308 SGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGARYTDMHAD 367

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I+SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 368 YTGQGFDQLLDVIDKIKNNPNDRRIIISAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 427

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT ++A V     G+F+H +GD H+Y+ H      QL + 
Sbjct: 428 YQRSADMGLGVPFNIASYALLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQEQLRKL 487

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + IN    D+ +F   DF L  Y+PH  I  K++V
Sbjct: 488 PKPFPILKINSEKKDIDTFVAADFKLIGYDPHQKIEMKMAV 528


>gi|296473671|gb|DAA15786.1| thymidylate synthase [Bos taurus]
          Length = 354

 Score =  352 bits (904), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 175/320 (54%), Gaps = 58/320 (18%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  R DRTG GT S FG Q R++L   FPLLTTK+V WK V+ ELLWF
Sbjct: 35  QYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRDEFPLLTTKRVFWKGVLEELLWF 94

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 95  IKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWRHFGAEYKDMDS 154

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 155 EYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 214

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ--- 219
           LYQRSGD+ LG+PFNIASY+LLT M+A +   + G+F+HTLGD H+Y NH E    Q   
Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQALM 274

Query: 220 -----------------------------------LSRSPRTLPQMIINPNIVDLLSFRY 244
                                              L R PR  P++ I   +  +  F+ 
Sbjct: 275 ELRGQSSRSLDGDGQAGTSRWAPVATDTERDRCCELQREPRPFPKLKILRKVETIDDFQA 334

Query: 245 EDFTLRSYEPHAAILAKVSV 264
           EDF +  Y PH  I  +++V
Sbjct: 335 EDFQIEGYNPHPTIKMEMAV 354


>gi|328751979|gb|EGF65595.1| thymidylate synthase [Propionibacterium acnes HL025PA2]
          Length = 269

 Score =  352 bits (904), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 158/270 (58%), Positives = 199/270 (73%), Gaps = 7/270 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR ++  G  R DRTG GT S FG+QM FDL +GFPL+TTKK++ +SV  ELL
Sbjct: 1   MQIYLDLLRRILDEGVRREDRTGTGTVSVFGHQMVFDLREGFPLVTTKKIYTRSVFGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L+ + + IWDEWAD++G+LGP+YG QWRSWPD DG  IDQI+++V+ +R
Sbjct: 61  WFLRGDTNVGWLYDNNIHIWDEWADENGDLGPVYGHQWRSWPDDDG-TIDQIANVVEQIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGI 174
            +P+SRRHIVSAWNVA I +MALPPCH LFQFYV          LSCQLYQRSGD FLG+
Sbjct: 120 TNPWSRRHIVSAWNVAEIKEMALPPCHTLFQFYVTPDDRGTPTWLSCQLYQRSGDTFLGV 179

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT ++ASV G +   F+HTLGD H+Y NH +Q   QL R PR  P + +NP
Sbjct: 180 PFNIASYALLTHLVASVTGLKPLRFVHTLGDAHVYLNHLDQVHEQLKRKPRHRPTLTVNP 239

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I D+  F   D TL  Y+P+ A+ A ++V
Sbjct: 240 GIRDIDGFELSDITLTGYDPYPALPAPIAV 269


>gi|269219953|ref|ZP_06163807.1| thymidylate synthase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210693|gb|EEZ77033.1| thymidylate synthase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 267

 Score =  352 bits (904), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 139/262 (53%), Positives = 179/262 (68%), Gaps = 2/262 (0%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DLL  V++ G+++ DRTG GT S FG Q+R+ L++GFP +TTK V  K+V  ELLWFL
Sbjct: 7   YEDLLADVLENGAEKGDRTGTGTLSVFGRQIRYRLAEGFPRITTKFVAMKAVKGELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
            GD+NV +L   G++IWDEWAD  GELGP+YG QWRSWP  DG  IDQI  ++  LRA P
Sbjct: 67  SGDTNVRWLQERGITIWDEWADDAGELGPVYGYQWRSWPTPDGRHIDQIEQVLGELRAHP 126

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWN A +DKMAL PCH +FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+L
Sbjct: 127 DSRRLVVSAWNPADLDKMALQPCHAMFQFYVADGRLSCQLYQRSADLFLGVPFNIASYAL 186

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A   G   G+F+ T GD H+Y NH +Q   QL+R P   P + +      +  + 
Sbjct: 187 LTHMMAQQAGLDVGDFVWTGGDCHIYLNHVKQVKEQLTREPYPFPTLRL-RKAPSIFEYA 245

Query: 244 YEDFTL-RSYEPHAAILAKVSV 264
            +D    + Y  H  + A V+V
Sbjct: 246 MDDIDASQGYRHHPKLHAPVAV 267


>gi|300812535|ref|ZP_07092956.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496492|gb|EFK31593.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 318

 Score =  352 bits (903), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 183/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V +  +  ELLW
Sbjct: 6   QAYLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQ 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   DG  IDQI+ +++ ++ +P SRR IV+
Sbjct: 126 KFCQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHF Q + QL R P   P + +NP    +  F   D  L +
Sbjct: 246 TGLEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPEKKKVADFEMADIKLVN 305

Query: 252 YEPHAAILAKVSV 264
           Y+  + I A V+V
Sbjct: 306 YQHGSTIKAPVAV 318


>gi|328957378|ref|YP_004374764.1| thymidylate synthase [Carnobacterium sp. 17-4]
 gi|328673702|gb|AEB29748.1| thymidylate synthase [Carnobacterium sp. 17-4]
          Length = 316

 Score =  352 bits (903), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 143/312 (45%), Positives = 187/312 (59%), Gaps = 50/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL+L + V++ G  + DRTG GT+S FGYQMR+DL KGFPLLTTK+V +  +  ELLWF
Sbjct: 5   EYLNLGKKVLEDGHVKTDRTGTGTKSLFGYQMRYDLQKGFPLLTTKRVPFGLIKSELLWF 64

Query: 63  LRGDSNVSYLHRHGVSIWDEWA-------------------------------------- 84
           ++G++N+ YL +H   IWDEWA                                      
Sbjct: 65  IKGNTNIRYLLQHNNHIWDEWAFERFVKSEEYVGPDMTDFGRRALVDEEFKAVYDVEKEA 124

Query: 85  ------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                        K GELG +YG QWR W    G  IDQ+  ++Q ++  P SRR +VSA
Sbjct: 125 FCTRILEDDAFAAKYGELGNVYGAQWRRWKTTQGETIDQLKDVIQQIKTTPDSRRMLVSA 184

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  +
Sbjct: 185 WNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAHEV 244

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEF+HTLGD HLY+NHFEQ   QL+R PR  P + +N +   +  F  ED  +  Y
Sbjct: 245 GLEVGEFVHTLGDAHLYSNHFEQMKKQLAREPRDFPTIALNESKNSIFDFEMEDIQIEGY 304

Query: 253 EPHAAILAKVSV 264
           +PH  I A ++V
Sbjct: 305 DPHPGIKAPIAV 316


>gi|125984772|ref|XP_001356150.1| GA16493 [Drosophila pseudoobscura pseudoobscura]
 gi|54644469|gb|EAL33210.1| GA16493 [Drosophila pseudoobscura pseudoobscura]
          Length = 330

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 135/285 (47%), Positives = 181/285 (63%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLD ++++I  G  R DRT VGT S FG Q+RFD+   FPLLTTK+V +++VV EL+W
Sbjct: 46  QQYLDFIQYIIGNGERRIDRTNVGTLSVFGSQLRFDMRLSFPLLTTKRVFFRAVVEELIW 105

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G ++   L    V IWD  + ++            G+LGP+YG QWR +        
Sbjct: 106 FVGGKTDAKLLQAKNVHIWDGNSTREYLDKLGHTDRAVGDLGPVYGFQWRHFGAEYGTCD 165

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159
            DY G  IDQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QFYV    G+L
Sbjct: 166 DDYSGKGIDQLRQVIDTIRHNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSQTRGEL 225

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQLYQRS D+ LG+PFNIASY+LLT M+A V G + G+FIHT+GD H+Y NH +    Q
Sbjct: 226 SCQLYQRSADMGLGVPFNIASYALLTYMIAHVTGLKTGDFIHTMGDAHVYLNHVDPLKEQ 285

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R PR  P++ I   + ++  FRYEDF +  YEP+  I   ++V
Sbjct: 286 LKRKPRPFPKLNIKRQVENIEDFRYEDFEIIGYEPYPKIKMDMAV 330


>gi|170051025|ref|XP_001861577.1| thymidylate synthase [Culex quinquefasciatus]
 gi|167872454|gb|EDS35837.1| thymidylate synthase [Culex quinquefasciatus]
          Length = 310

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 180/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61
           QYL+L R +I  G+ R DRTGVGT S FG QMR++L     PLLTTK+V ++ V  ELLW
Sbjct: 28  QYLELTRRIIAKGNKRLDRTGVGTLSIFGSQMRYNLRNNTLPLLTTKRVFFRGVAEELLW 87

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+RG +N   L +  + IWD  +             ++G+LGP+YG QWR +        
Sbjct: 88  FIRGRTNAKDLQQKNIHIWDGNSTREFLDSAGFTDREEGDLGPVYGFQWRHFGAKYKTCD 147

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  IDQ++ ++  ++ +P  RR I+SAWN   I +MALPPCHCL QF+V +G+LSC
Sbjct: 148 DDYTGEGIDQLAEVINRIKTNPTDRRIIMSAWNPVDIPQMALPPCHCLAQFFVSDGELSC 207

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASY+LLT M+A V G Q G+F+HT GD H+Y NH E    QL 
Sbjct: 208 QLYQRSADMGLGVPFNIASYALLTHMIAHVTGLQPGDFVHTTGDTHVYLNHVEPLQAQLM 267

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P+  P +     +  +  F++EDF +R Y+P+  I  +++V
Sbjct: 268 RKPKPFPTLHFKRVVQSIDDFQFEDFDVRGYDPYPTIKMQMAV 310


>gi|46908107|ref|YP_014496.1| thymidylate synthase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093257|ref|ZP_00231029.1| thymidylate synthase [Listeria monocytogenes str. 4b H7858]
 gi|254826083|ref|ZP_05231084.1| thymidylate synthase [Listeria monocytogenes FSL J1-194]
 gi|254852778|ref|ZP_05242126.1| thymidylate synthase [Listeria monocytogenes FSL R2-503]
 gi|254931955|ref|ZP_05265314.1| thymidylate synthase [Listeria monocytogenes HPB2262]
 gi|254992225|ref|ZP_05274415.1| thymidylate synthase [Listeria monocytogenes FSL J2-064]
 gi|255521581|ref|ZP_05388818.1| thymidylate synthase [Listeria monocytogenes FSL J1-175]
 gi|300763815|ref|ZP_07073812.1| thymidylate synthase [Listeria monocytogenes FSL N1-017]
 gi|62901328|sp|Q71YE1|TYSY_LISMF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|46881377|gb|AAT04673.1| thymidylate synthase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018389|gb|EAL09150.1| thymidylate synthase [Listeria monocytogenes str. 4b H7858]
 gi|258606105|gb|EEW18713.1| thymidylate synthase [Listeria monocytogenes FSL R2-503]
 gi|293583507|gb|EFF95539.1| thymidylate synthase [Listeria monocytogenes HPB2262]
 gi|293595324|gb|EFG03085.1| thymidylate synthase [Listeria monocytogenes FSL J1-194]
 gi|300515551|gb|EFK42601.1| thymidylate synthase [Listeria monocytogenes FSL N1-017]
 gi|328466226|gb|EGF37383.1| thymidylate synthase [Listeria monocytogenes 1816]
 gi|328473593|gb|EGF44430.1| thymidylate synthase [Listeria monocytogenes 220]
          Length = 314

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|330967045|gb|EGH67305.1| thymidylate synthase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 277

 Score =  351 bits (902), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 137/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V++ G+ + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+
Sbjct: 1   MKSYLDLLGDVLENGAQKGDRTGTGTISVFGRQFRHDLSKGFPLLTTKKLHFKSIVNELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV +L+ +GV IW+EWA ++G+LGP+YG QW +WP  DG  I+QI  +V +L+
Sbjct: 61  WFLGGDTNVKWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              KMALPPCH L+QFYV + KLS  L+ RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENARQGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+P+N AS + LT MLA       GE + +L DVH+Y+NH EQ   QL+R PR L
Sbjct: 181 SDTFLGLPYNTASLACLTHMLAQQCDLDVGEIVISLSDVHIYSNHMEQVKTQLTREPRQL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +      +  +++EDF +  Y+PH  I A VS+
Sbjct: 241 PELKLLRKPASIYDYKFEDFEVVGYDPHPHIAAPVSI 277


>gi|313623197|gb|EFR93452.1| thymidylate synthase [Listeria innocua FSL J1-023]
          Length = 314

 Score =  351 bits (902), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDETFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|332312316|gb|EGJ25411.1| Thymidylate synthase [Listeria monocytogenes str. Scott A]
          Length = 317

 Score =  351 bits (902), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 4   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 64  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 123

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 124 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 183

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 184 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 243

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 244 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 303

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 304 GYNPDPAIKAPISV 317


>gi|118349035|ref|XP_001033394.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Tetrahymena thermophila]
 gi|89287743|gb|EAR85731.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Tetrahymena thermophila SB210]
          Length = 485

 Score =  351 bits (902), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 136/285 (47%), Positives = 179/285 (62%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+L+  +IK G  + DRTG GT S FG  MRFDLSK FPLLTTK V W+ VV EL+W
Sbjct: 201 YQYLELIDEIIKNGHVKTDRTGTGTISQFGKLMRFDLSKSFPLLTTKNVFWRGVVEELIW 260

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F++G +N   L   GV IWD                ++G+LGP+YG QWR +        
Sbjct: 261 FIKGSTNSKILSEKGVKIWDGNGSREFLDQLGFKNREEGDLGPVYGFQWRHFGAEYKDMH 320

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y G  +DQ+  ++ +++ +P SRR I++AWNV  +  MALPPCH + QFYV++ KLSC
Sbjct: 321 TNYKGKGVDQLQDLINTIKKNPDSRRMIMNAWNVKDLPLMALPPCHVMSQFYVNDNKLSC 380

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LGIPFNIASY+LLT M+A V   Q GEFIH LGD H+Y+NH +Q  +QL 
Sbjct: 381 MMYQRSCDMGLGIPFNIASYALLTHMIAQVTNMQVGEFIHVLGDAHVYSNHVDQLKIQLE 440

Query: 222 RSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+P   P + IN N     +  F  EDF L  Y  H  I  K++V
Sbjct: 441 RAPYPFPLLKINNNKQYNSIEDFTLEDFELIGYNYHPKIQMKMAV 485


>gi|326774199|ref|ZP_08233481.1| thymidylate synthase [Actinomyces viscosus C505]
 gi|326636338|gb|EGE37242.1| thymidylate synthase [Actinomyces viscosus C505]
          Length = 275

 Score =  351 bits (902), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 139/264 (52%), Positives = 177/264 (67%), Gaps = 4/264 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL  V+  G+ + DRTG GTRS F  Q+R+DL +GFP +TTK V  K+V  ELLWFL
Sbjct: 13  YENLLAEVLTNGTAKSDRTGTGTRSLFARQLRYDLRRGFPRITTKFVAMKAVKGELLWFL 72

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RG++NV +L   G++IWDEWAD  GELGP+YG QWRSWP  DG  IDQI+ ++ +LR DP
Sbjct: 73  RGETNVRWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGAIDQITGLIDTLRTDP 132

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +  MAL PCH  FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 133 DSRRMLVSAWNVSELGSMALAPCHAFFQCYVADGRLSLQIYQRSADLFLGVPFNIASYAL 192

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDLLS 241
           L  MLA     + GE I T GD H+Y+NH EQ   QLSR P     P + +      + S
Sbjct: 193 LAHMLAQQTDLEPGELIWTGGDCHIYDNHIEQVRTQLSRVPNAHPFPTLRLERA-ESIDS 251

Query: 242 FRYEDFTL-RSYEPHAAILAKVSV 264
           +  +D    + YE H  I A V+V
Sbjct: 252 YDMDDIDASQGYEHHPTIKAPVAV 275


>gi|329945997|ref|ZP_08293684.1| thymidylate synthase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528445|gb|EGF55423.1| thymidylate synthase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 296

 Score =  351 bits (902), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 140/264 (53%), Positives = 178/264 (67%), Gaps = 4/264 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL  V+  G+ + DRTG GT S F  Q+R+DL++GFP +TTK V  K+V  ELLWFL
Sbjct: 34  YENLLADVLTNGALKSDRTGTGTHSLFARQLRYDLARGFPRITTKFVAMKAVKGELLWFL 93

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+NV +L   G++IWDEWAD  GELGP+YG QWRSWP  DG  IDQI+ ++ +LR DP
Sbjct: 94  RGDTNVRWLQERGITIWDEWADNAGELGPVYGSQWRSWPTCDGGAIDQIAGLINTLRTDP 153

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +  MAL PCH  FQ Y  +G+LS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 154 DSRRMLVSAWNVSDLSSMALAPCHAFFQCYAADGRLSLQIYQRSADLFLGVPFNIASYAL 213

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDLLS 241
           LT MLA   G   GE + T GD H+YNNH EQ   QLSR P     P + +      + +
Sbjct: 214 LTHMLAQQAGLDPGELVWTGGDCHIYNNHVEQVRTQLSRVPSAYPFPTLRLERA-ASIDA 272

Query: 242 FRYEDFTL-RSYEPHAAILAKVSV 264
           +  +D    + YE H AI A V+V
Sbjct: 273 YDMDDIDASQGYEHHPAIKAPVAV 296


>gi|304385033|ref|ZP_07367379.1| thymidylate synthase [Pediococcus acidilactici DSM 20284]
 gi|304329227|gb|EFL96447.1| thymidylate synthase [Pediococcus acidilactici DSM 20284]
          Length = 323

 Score =  351 bits (902), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 144/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R+V++ G  + DRT  GT STFGYQMRFDLS+GFPLLTTK+V +  +  EL+W
Sbjct: 11  EQYLNLERYVLENGHQKSDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELMW 70

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL+GD+N+ YL +H   IWDEWA                                     
Sbjct: 71  FLKGDTNIRYLLQHKNHIWDEWAFKKWVESAEYDGPDMTNFGHRSLIDSDFNAQYQVQKD 130

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IV+
Sbjct: 131 RFTKLILEDDAFAAKYGDLGNVYGSQWRAWKTSTGETIDQIENVIDLIKNHPDSRRMIVT 190

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLT M+A  
Sbjct: 191 AWNPEDVPTAALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGVPFNIASYALLTAMIAKT 250

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y+NH  Q   QL+R PR  P++  N    ++  +   D  +  
Sbjct: 251 CGLEVGEFVHTLGDAHIYSNHIAQVKEQLTRDPRPAPRLKFNQVHENIFDYEPADIVVEG 310

Query: 252 YEPHAAILAKVSV 264
           Y+PH AI A V+V
Sbjct: 311 YDPHPAIKAPVAV 323


>gi|260583621|ref|ZP_05851369.1| thymidylate synthase [Granulicatella elegans ATCC 700633]
 gi|260158247|gb|EEW93315.1| thymidylate synthase [Granulicatella elegans ATCC 700633]
          Length = 314

 Score =  351 bits (902), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 149/314 (47%), Positives = 188/314 (59%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  + + G ++ DRTG GT+S FGYQMRFDL+KGFP+LTTK+V +  +  ELL
Sbjct: 1   MKQYLELLEKIKQEGIEKSDRTGTGTKSIFGYQMRFDLTKGFPILTTKRVPFGLIKSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WF++GD+N+ YL +H   IWDEWA                                    
Sbjct: 61  WFIKGDTNIRYLLQHNNHIWDEWAFKRYVESPDYTGEDMTDFGRRSLQDPVFKEVYEKEL 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ L+  P SRR +V
Sbjct: 121 ETFCQRILNEDDFAAKYGELGNIYGSQWRHWKTTQGETIDQLAQVIEMLKTSPDSRRLLV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A+
Sbjct: 181 SAWNPEDVPSMALPPCHTMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAN 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + GEF+HTLGD HLY NH EQ DLQLSR P  LPQ+++      L      D  L 
Sbjct: 241 EVGLEVGEFVHTLGDAHLYLNHLEQVDLQLSREPFELPQLVLKHPEKSLYDLEVADVVLE 300

Query: 251 SYEPHAAILAKVSV 264
            YE H  I A ++V
Sbjct: 301 GYECHPTIKAPIAV 314


>gi|226224478|ref|YP_002758585.1| thymidylate synthase [Listeria monocytogenes Clip81459]
 gi|259550791|sp|C1KWH4|TYSY_LISMC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|225876940|emb|CAS05649.1| Putative thymidylate synthase [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
          Length = 314

 Score =  351 bits (902), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDSAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPKDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|323339894|ref|ZP_08080163.1| thymidylate synthase [Lactobacillus ruminis ATCC 25644]
 gi|323092767|gb|EFZ35370.1| thymidylate synthase [Lactobacillus ruminis ATCC 25644]
          Length = 319

 Score =  351 bits (901), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 147/311 (47%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+R ++  G  + DRT  GT S FGYQMRFDL KGFPLLTTKKV    +  ELLWFL
Sbjct: 9   YLQLIRDILDHGHRKDDRTKTGTISLFGYQMRFDLGKGFPLLTTKKVPLGLIKSELLWFL 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
            GD+N+ YL +H   IWDEWA                                       
Sbjct: 69  NGDTNIQYLLKHKNHIWDEWAFKKWVESDEYEGPDMTDFGLRCQKDPEFDKVYREQMKLF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W   +G  IDQI ++++ ++ +P SRR IV+AW
Sbjct: 129 CDRMVNDDEFAKKYGDLGNVYGAQWRHWKTSNGETIDQIKNVIEEIKTNPDSRRLIVTAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV+NGKLSCQLYQRSGDVFLG+PFNIASYSLLT ++A   G
Sbjct: 189 NPEDVPTSALPPCHSLFQFYVNNGKLSCQLYQRSGDVFLGVPFNIASYSLLTHLIARECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HTLGD H+Y+NH EQ   QL R+P+  P + +NP    L  F  +D  +  Y+
Sbjct: 249 LEVGEFVHTLGDAHIYSNHIEQVKEQLKRTPKKAPTLWLNPEKKHLEDFDVDDIKVIDYD 308

Query: 254 PHAAILAKVSV 264
           P  AI A V+V
Sbjct: 309 PAPAIKAPVAV 319


>gi|254831525|ref|ZP_05236180.1| thymidylate synthase [Listeria monocytogenes 10403S]
          Length = 314

 Score =  351 bits (901), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  +I A +SV
Sbjct: 301 GYNPDPSIKAPISV 314


>gi|217963973|ref|YP_002349651.1| thymidylate synthase [Listeria monocytogenes HCC23]
 gi|254790241|sp|B8DDM8|TYSY_LISMH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|217333243|gb|ACK39037.1| thymidylate synthase [Listeria monocytogenes HCC23]
 gi|307571457|emb|CAR84636.1| thyA [Listeria monocytogenes L99]
          Length = 314

 Score =  351 bits (901), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 195/314 (62%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|156551994|ref|XP_001603103.1| PREDICTED: similar to Tyms protein [Nasonia vitripennis]
          Length = 316

 Score =  351 bits (901), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 133/282 (47%), Positives = 177/282 (62%), Gaps = 21/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61
           QYL L+R ++  G+ + DRTGVGT S FG QMRF L  G  PLLTTK+V W++V  EL W
Sbjct: 34  QYLKLIRLILDKGAVKDDRTGVGTHSVFGTQMRFSLRDGTLPLLTTKRVFWRAVAEELFW 93

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+RG +N   L   GV IWD  A             ++G+LGP+YG QWR +        
Sbjct: 94  FIRGSTNAKELSAKGVKIWDANASREFLDTCGFQDREEGDLGPVYGFQWRHFGAKYVDMH 153

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ++ ++  ++ +P  RR I+SAWN   I KMALPPCH L QFYV +G+LSC
Sbjct: 154 TDYSGQGFDQLADVIDKVKNNPDDRRIIMSAWNPVDIPKMALPPCHSLAQFYVYDGELSC 213

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQR+GD+ LG+PFNIASYSLLT+M+A V   + GEF+HT+GD H+Y NH +    Q+ 
Sbjct: 214 HLYQRAGDMGLGVPFNIASYSLLTIMIAHVANLKPGEFVHTMGDTHVYRNHVDAVKEQIK 273

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R PR  P++ I   + D+  F++ DF L  Y PH  I   ++
Sbjct: 274 REPRPFPKLRIKRQVTDIDDFQFSDFELEGYNPHPKIDMSMA 315


>gi|161870554|ref|YP_001599726.1| thymidylate synthase [Neisseria meningitidis 053442]
 gi|161596107|gb|ABX73767.1| thymidylate synthase [Neisseria meningitidis 053442]
          Length = 231

 Score =  351 bits (901), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 155/231 (67%), Positives = 189/231 (81%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           MRFDL KGFPLLTTKK+H +S++HELLWFL+GD+N+ YL  + VSIWDEWAD++G+LGP+
Sbjct: 1   MRFDLGKGFPLLTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPV 60

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG QWR+WP  DG  IDQI+++++ ++ +P SRR IVSAWN AL+D+MALPPCH LFQFY
Sbjct: 61  YGYQWRNWPAPDGRHIDQIANVLEQIKKNPDSRRLIVSAWNPALVDEMALPPCHTLFQFY 120

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V +GKLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G + GEF+HT GD HLY NHF
Sbjct: 121 VADGKLSCQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHF 180

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           EQA LQL R PR LP M INP + DL SF++EDF L  Y+PH  I A VSV
Sbjct: 181 EQAALQLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV 231


>gi|317125309|ref|YP_004099421.1| thymidylate synthase [Intrasporangium calvum DSM 43043]
 gi|315589397|gb|ADU48694.1| thymidylate synthase [Intrasporangium calvum DSM 43043]
          Length = 271

 Score =  351 bits (901), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 157/271 (57%), Positives = 198/271 (73%), Gaps = 7/271 (2%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV+  G ++ DRTG GT S FG+QMRFDL+ GFP +TTK++H +S++ ELL
Sbjct: 1   MRQYLDLLDHVLTHGQEKSDRTGTGTLSVFGHQMRFDLADGFPAMTTKRLHLRSIIGELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+NV +L   G++IWDEWAD  G+LGPIYG QWRSWP  DG  +DQI+ +++ +R
Sbjct: 61  WFLRGDTNVRWLQERGITIWDEWADAKGDLGPIYGYQWRSWPTPDGRRVDQIARVIEQIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-------NGKLSCQLYQRSGDVFLG 173
            +P SRRHIVSAWNVA +D MALPPCH +FQFYV          +LSCQLYQRS D+FLG
Sbjct: 121 TNPDSRRHIVSAWNVADVDDMALPPCHTMFQFYVHPATESGGPRRLSCQLYQRSADIFLG 180

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +PFNIASY+LLT M+A +   + GEF+HTLGD HLY NH +QA LQL+R+P  LP M I 
Sbjct: 181 VPFNIASYALLTQMIAQLTDLEPGEFVHTLGDAHLYLNHLDQARLQLTRTPHPLPTMRIT 240

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P   D+ +F  +DF L  Y     I A ++V
Sbjct: 241 PGKKDIDAFDIDDFVLEDYVADPGIKAPIAV 271


>gi|315282890|ref|ZP_07871198.1| thymidylate synthase [Listeria marthii FSL S4-120]
 gi|313613464|gb|EFR87300.1| thymidylate synthase [Listeria marthii FSL S4-120]
          Length = 314

 Score =  351 bits (901), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAESDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 AQFKKRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|116873310|ref|YP_850091.1| thymidylate synthase [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|123463950|sp|A0AJY0|TYSY_LISW6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116742188|emb|CAK21312.1| thymidylate synthase [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 314

 Score =  351 bits (900), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSADYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EQFKTRILEDEGFANKYGELGNIYGKQWREWKTSQGETIDQLADVIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPTTIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYHPDPAIKAPISV 314


>gi|284802320|ref|YP_003414185.1| thymidylate synthase [Listeria monocytogenes 08-5578]
 gi|284995462|ref|YP_003417230.1| thymidylate synthase [Listeria monocytogenes 08-5923]
 gi|284057882|gb|ADB68823.1| thymidylate synthase [Listeria monocytogenes 08-5578]
 gi|284060929|gb|ADB71868.1| thymidylate synthase [Listeria monocytogenes 08-5923]
          Length = 314

 Score =  351 bits (900), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRVERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  +I A +SV
Sbjct: 301 GYNPDPSIKAPISV 314


>gi|47096916|ref|ZP_00234494.1| thymidylate synthase [Listeria monocytogenes str. 1/2a F6854]
 gi|224500227|ref|ZP_03668576.1| thymidylate synthase [Listeria monocytogenes Finland 1988]
 gi|254827241|ref|ZP_05231928.1| thymidylate synthase [Listeria monocytogenes FSL N3-165]
 gi|254899429|ref|ZP_05259353.1| thymidylate synthase [Listeria monocytogenes J0161]
 gi|254912432|ref|ZP_05262444.1| thymidylate synthase [Listeria monocytogenes J2818]
 gi|254936759|ref|ZP_05268456.1| thymidylate synthase [Listeria monocytogenes F6900]
 gi|47014729|gb|EAL05684.1| thymidylate synthase [Listeria monocytogenes str. 1/2a F6854]
 gi|258599624|gb|EEW12949.1| thymidylate synthase [Listeria monocytogenes FSL N3-165]
 gi|258609355|gb|EEW21963.1| thymidylate synthase [Listeria monocytogenes F6900]
 gi|293590413|gb|EFF98747.1| thymidylate synthase [Listeria monocytogenes J2818]
          Length = 314

 Score =  351 bits (900), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRIIEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  +I A +SV
Sbjct: 301 GYNPDPSIKAPISV 314


>gi|104773868|ref|YP_618848.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116513875|ref|YP_812781.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122275355|sp|Q04B29|TYSY_LACDB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123077296|sp|Q1GAP2|TYSY_LACDA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|103422949|emb|CAI97614.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116093190|gb|ABJ58343.1| thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|325125534|gb|ADY84864.1| Thymidylate synthase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 318

 Score =  350 bits (899), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 183/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G+D+ DRTG GTRS FG QMRFDLS+GFP+LTTK+V +  +  ELLW
Sbjct: 6   QAYLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQ 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   DG  IDQI+ +++ ++ +P SRR IV+
Sbjct: 126 KFCQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV +GKLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT+GD H+Y NHF Q + QL R P   P + +NP    +  F   D  L +
Sbjct: 246 TGLEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPGKKKVADFEMADIKLVN 305

Query: 252 YEPHAAILAKVSV 264
           Y+  + I A V+V
Sbjct: 306 YQHGSTIKAPVAV 318


>gi|224004314|ref|XP_002295808.1| possible thymidylate synthase [Thalassiosira pseudonana CCMP1335]
 gi|209585840|gb|ACI64525.1| possible thymidylate synthase [Thalassiosira pseudonana CCMP1335]
          Length = 516

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 123/287 (42%), Positives = 173/287 (60%), Gaps = 25/287 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61
           QYL++ R +I+ G  R DRTG GT S FG QMR+ L     PLLTTK+  W+ V  ELLW
Sbjct: 230 QYLEICRDIIENGVRRGDRTGTGTLSKFGVQMRYSLRDNTLPLLTTKRTFWRGVAEELLW 289

Query: 62  FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------- 102
           F++G +N + L    + IWD                ++G+LGP+YG QWR +        
Sbjct: 290 FVKGSTNANELADKNIHIWDGNGSREFLDSRGLQHREEGDLGPVYGFQWRHFGAEYKDMH 349

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--L 159
            DY G  +DQ++  +  +  +P  RR ++SAWN   +D MALPPCH   QFYVD  +  +
Sbjct: 350 ADYTGQGVDQLADCIDKIINNPEDRRIVMSAWNPKDLDVMALPPCHMFCQFYVDTDRNEV 409

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQ+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH +    Q
Sbjct: 410 SCQMYQRSADMGLGVPFNIASYALLTHMIAKVTGRKAGDFVHTIGDAHVYLNHVDALKEQ 469

Query: 220 LSRSPRTLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R PR  P++ +    +  D+  F ++DF +  Y+PH  I  K++V
Sbjct: 470 LERKPRAFPKLKMKDGKDFNDIDGFEFDDFEVVGYKPHKTIKMKMAV 516


>gi|320163301|gb|EFW40200.1| thymidylate synthase [Capsaspora owczarzaki ATCC 30864]
          Length = 337

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 131/284 (46%), Positives = 179/284 (63%), Gaps = 22/284 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL+R +I+ G +R DRTG GTRS FG QMRF L  G  PLLTTK+V W+ V  ELLW
Sbjct: 54  QYLDLIRAIIENGDERLDRTGTGTRSIFGAQMRFSLRDGVMPLLTTKRVFWRGVAEELLW 113

Query: 62  FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------- 102
           F+ G++N + L    + IWD                ++G+LGP+YG QWR +        
Sbjct: 114 FVAGNTNATALSDKDIHIWDANGSRAFLDGRGLQHREEGDLGPVYGFQWRHFGAPYTTMH 173

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LS 160
            DY+G  +DQ+  ++++++ +P  RR I+SAWN   I  MALPPCH + QF+V + K LS
Sbjct: 174 ADYEGKGVDQLKHVIETIKTNPNDRRLIISAWNPVDIPNMALPPCHMMCQFHVSSKKELS 233

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C +YQRS D+ LG+PFNIASY+LLT+M+A V G   GE +HT+GD H+Y NH +    QL
Sbjct: 234 CLMYQRSADMGLGVPFNIASYALLTIMVAEVTGLTPGELVHTIGDAHVYLNHIDPLKEQL 293

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P   +N  + ++  FR+EDF +  Y PHA I   ++V
Sbjct: 294 KREPRPFPTFKLNRKVTEIDDFRFEDFVITGYNPHAKIEMDMAV 337


>gi|255543751|ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Ricinus communis]
 gi|223547949|gb|EEF49441.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Ricinus communis]
          Length = 528

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 130/281 (46%), Positives = 170/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L++ +I  G  + DRTG GT S FG Q+RF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 248 YLRLVQEIISDGILKDDRTGTGTLSKFGCQVRFNLRKTFPLLTTKKVFWRGVVEELLWFI 307

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD  A +D            G+LGP+YG QWR +         D
Sbjct: 308 SGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKNREEGDLGPVYGFQWRHFGARYTDMHAD 367

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  +V  ++ +P  RR I+SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 368 YTGQGFDQLLDVVNKIKNNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSCQM 427

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY LLT ++A V     G+F+H +GD H+Y  H      QL + 
Sbjct: 428 YQRSADMGLGVPFNIASYGLLTCIIAHVCDLVPGDFVHVIGDTHVYRTHVRPLQEQLQKL 487

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   ++ SF   DF L  Y+PH  I  K++V
Sbjct: 488 PKPFPILKINPEKKNIDSFVAADFKLIGYDPHHKIEMKMAV 528


>gi|16803914|ref|NP_465399.1| thymidylate synthase [Listeria monocytogenes EGD-e]
 gi|224501326|ref|ZP_03669633.1| thymidylate synthase [Listeria monocytogenes FSL R2-561]
 gi|22096224|sp|Q8Y626|TYSY_LISMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|16411328|emb|CAC99952.1| lmo1874 [Listeria monocytogenes EGD-e]
          Length = 314

 Score =  350 bits (898), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 151/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRIIEDEAFATKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  +I A +SV
Sbjct: 301 GYNPDPSIKAPISV 314


>gi|332638740|ref|ZP_08417603.1| thymidylate synthase [Weissella cibaria KACC 11862]
          Length = 318

 Score =  350 bits (898), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 140/313 (44%), Positives = 184/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V++ G  + DRTG GTRS FG QMRFD+++GFPLLTTK+V +  +  ELLW
Sbjct: 6   QAYLDLAQEVLETGHAKGDRTGTGTRSLFGRQMRFDMAEGFPLLTTKRVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FL+G++N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLQGNTNIRFLLEHNNHIWDEWAFKNWIESADYTGPDMTDFGRRSLVDEAFKAQYDEQHQ 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           GELG +YG QWR W    G  IDQI  +V  ++ +P SRR IV+
Sbjct: 126 LFVDRILADDAFAKQYGELGDVYGAQWRHWRKVQGGFIDQIDDVVNQIKTNPNSRRLIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV +GKLS QLYQRS D+FLG+PFNIASYSLL  M+A+ 
Sbjct: 186 AWNPEDVPSQALPPCHTLFQFYVADGKLSLQLYQRSADIFLGVPFNIASYSLLLHMVAAQ 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y+NH  Q   QLSR    LPQ+++NP++  +  +  +D  +  
Sbjct: 246 TGLEAGEFVHTLGDAHIYSNHIAQVTEQLSREMVELPQLVLNPDVKSIFDYTMDDIKVEG 305

Query: 252 YEPHAAILAKVSV 264
           Y+P  +I A V+V
Sbjct: 306 YKPAKSIKAPVAV 318


>gi|296422006|ref|XP_002840554.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636772|emb|CAZ84745.1| unnamed protein product [Tuber melanosporum]
          Length = 306

 Score =  350 bits (898), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 134/291 (46%), Positives = 184/291 (63%), Gaps = 28/291 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +QYLDL+R+++  G  R DRTG GT S F   Q+RF+L    FPLLTTK++  K+++HEL
Sbjct: 16  YQYLDLVRNILTNGEHRPDRTGTGTISLFAPPQLRFNLKNHTFPLLTTKRLFHKAILHEL 75

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP----- 102
           LWF+ G ++ + L   GV IW+    +            +G+LGP+YG QWR +      
Sbjct: 76  LWFISGSTSNAPLSAVGVKIWEGNGSRAYLDSIGLTERAEGDLGPVYGFQWRHFGAKYVD 135

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ++ ++  L+ +PY RR I+SAWN A + KMALPPCH   QFYV     
Sbjct: 136 CHTDYSGQGVDQLADVIYKLKNNPYDRRIIMSAWNPADLAKMALPPCHMFAQFYVSYKEG 195

Query: 156 --NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
              G LSC LYQRS D+ LG+PFNIASY+LLT+M+A V G + GEFIHT+GD H+Y +H 
Sbjct: 196 KGMGALSCVLYQRSCDMGLGVPFNIASYALLTIMIAHVCGLEPGEFIHTMGDAHVYADHA 255

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +    QL R+PR  P + IN  + D+  F++EDF L  Y+PH +I   +SV
Sbjct: 256 DALKGQLERAPREFPTLKINRQVDDIDDFKFEDFELVGYDPHPSIKMNMSV 306


>gi|116333431|ref|YP_794958.1| thymidylate synthase [Lactobacillus brevis ATCC 367]
 gi|122269882|sp|Q03S95|TYSY_LACBA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116098778|gb|ABJ63927.1| thymidylate synthase [Lactobacillus brevis ATCC 367]
          Length = 316

 Score =  350 bits (898), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 145/311 (46%), Positives = 192/311 (61%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + V+  G ++ DRTG GT S FGYQMRF+L +GFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLAKTVLTTGHEKTDRTGTGTISLFGYQMRFNLQEGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 66  RGDTNIRFLLQHHNHIWDEWAFQRYVDSPEYHGPDMTDFGRRSLVDADFNQRYQAEKKAF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                      D  G+LG +YG QWR+W  + G  IDQ+++++++LR  P SRR IVSAW
Sbjct: 126 CDRIVTDQAFGDHFGDLGLVYGSQWRAWQGHQGETIDQLANVIETLRTHPDSRRMIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N A +  MALPPCH LFQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  +G
Sbjct: 186 NPADVPSMALPPCHTLFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTSLIAKEVG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + G+F+HTLGD H+Y+NH EQ   QL+R+P   PQ+ +NP+   +  +   D  +  Y+
Sbjct: 246 LEVGDFVHTLGDAHIYSNHVEQIKTQLARTPHAAPQLWLNPDKSSIFDYEMSDIKVTGYD 305

Query: 254 PHAAILAKVSV 264
           P  AI A V+V
Sbjct: 306 PEPAIKAPVAV 316


>gi|241854848|ref|XP_002415983.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
 gi|215510197|gb|EEC19650.1| dihydrofolate reductase-thymidylate synthase, putative [Ixodes
           scapularis]
          Length = 287

 Score =  349 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 135/284 (47%), Positives = 179/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL  L+H+++ G  + DRTGVGT   FG Q R+ L  G  PLLTTK+V W+ VV ELL
Sbjct: 4   YQYLKTLKHILENGKKKEDRTGVGTMLIFGVQCRYSLRNGTMPLLTTKRVFWRGVVEELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG ++   L   G+ IWD+               ++G+LGP+YG QWR +       
Sbjct: 64  WFLRGSTDAKELSERGIHIWDQNGSRRFLDSLGFFDREEGDLGPVYGFQWRHFGATYRNS 123

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    +DQI+ +V+ ++ DP  RR I+ +WN   I KM LPPCHCL QFYVD+ +LS
Sbjct: 124 HTDYGNEGVDQITRLVEIIKNDPNDRRMILCSWNPTDIKKMVLPPCHCLAQFYVDDDELS 183

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT M+A V G + GEF+H LGD H+Y NH E    QL
Sbjct: 184 CQLYQRSADMGLGVPFNIASYALLTHMMAKVTGKRPGEFVHNLGDAHIYLNHVESVKQQL 243

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I  ++ D+  FR +DF L  Y P+  I  ++SV
Sbjct: 244 EREPRPFPKLRIRRDVTDIFDFRCDDFELIDYNPYPKIKMEMSV 287


>gi|270291285|ref|ZP_06197507.1| thymidylate synthase [Pediococcus acidilactici 7_4]
 gi|270280131|gb|EFA25967.1| thymidylate synthase [Pediococcus acidilactici 7_4]
          Length = 316

 Score =  349 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 143/313 (45%), Positives = 185/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R+V++ G  + DRT  GT STFGYQMRFDLS+GFPLLTTK+V +  +  EL+W
Sbjct: 4   EQYLNLERYVLENGHQKSDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELMW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL+GD+N+ YL +H   IWDEWA                                     
Sbjct: 64  FLKGDTNIRYLLQHKNHIWDEWAFKKWVESAEYDGPDMTNFGHRSLIDSDFNAQYQVQKD 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IV+
Sbjct: 124 RFTKLILEDDAFAAKYGDLGNVYGSQWRAWKTSTGETIDQIENVIDLIKNHPDSRRMIVT 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLT M+A  
Sbjct: 184 AWNPEDVPTAALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGVPFNIASYALLTAMIAKT 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y+NH  Q   QL+R PR  P++  N    ++  +   D  +  
Sbjct: 244 CGLEVGEFVHTLGDAHIYSNHIAQVKEQLARDPRPAPRLKFNQVHENIFDYEPADIVVEG 303

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I A V+V
Sbjct: 304 YDPHPTIKAPVAV 316


>gi|320533091|ref|ZP_08033824.1| thymidylate synthase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320134706|gb|EFW26921.1| thymidylate synthase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 297

 Score =  349 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 141/264 (53%), Positives = 177/264 (67%), Gaps = 4/264 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL  V+  G+ + DRTG GTRS F  Q+R+DL +GFP +TTK V  K+V  ELLWFL
Sbjct: 35  YENLLADVLTNGTSKSDRTGTGTRSLFARQLRYDLGRGFPRITTKFVAMKAVKGELLWFL 94

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+NV +L   G++IWDEWAD  GELGP+YG QWRSWP  DG VIDQIS ++ +LR DP
Sbjct: 95  RGDTNVGWLQERGITIWDEWADDSGELGPVYGSQWRSWPTRDGGVIDQISGLIDTLRTDP 154

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +  MAL PCH  FQ Y   G+LS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 155 DSRRMLVSAWNVSELGSMALAPCHAFFQCYAAEGRLSLQIYQRSADLFLGVPFNIASYAL 214

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDLLS 241
           LT MLA     + GE I T GD H+Y+NH EQ   QLSR P     P + +      + +
Sbjct: 215 LTHMLAQQADLEPGELIWTGGDCHIYDNHVEQVRTQLSRVPSAHPFPTLRLERA-ESIDA 273

Query: 242 FRYEDFTL-RSYEPHAAILAKVSV 264
           +  +D    + YE H  I A V+V
Sbjct: 274 YDMDDIDASQGYEHHPTIKAPVAV 297


>gi|162447551|ref|YP_001620683.1| thymidylate synthase [Acholeplasma laidlawii PG-8A]
 gi|189036925|sp|A9NG27|TYSY_ACHLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|161985658|gb|ABX81307.1| thymidylate synthase [Acholeplasma laidlawii PG-8A]
          Length = 288

 Score =  349 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 152/293 (51%), Positives = 196/293 (66%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL RH+++ G+ + DRTG GT+S FGYQM FDL  GFPLLTTKK   K ++HELL
Sbjct: 1   MKQYLDLARHIMENGTLKSDRTGTGTKSIFGYQMFFDLKDGFPLLTTKKTFLKGIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIW-----------------------------DEWADKDGELG 91
           WF++GD+N+ YL  + V IW                             DE+A K G+LG
Sbjct: 61  WFIKGDTNIKYLVDNNVGIWTDWPYKNYMNSSEYQGESIKEFSDKIRQSDEFAKKWGDLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++     N +DQI  I+ +L+ +P SRR ++SAWN A I +M LPPCH L Q
Sbjct: 121 PVYGSQWRNF-----NGVDQIEYIINTLKTNPDSRRMVLSAWNPAEIGQMMLPPCHTLIQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV + KLS QLYQRSGDVFLGIPFNIASY++  MM+A V GF+ G F+HT+GD H+Y N
Sbjct: 176 FYVVDNKLSLQLYQRSGDVFLGIPFNIASYAVFLMMVAQVTGFELGSFVHTIGDAHIYTN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           HF+Q +LQL+R+PR LP + IN +I  L  F+YEDF L  Y+P+  I   V+V
Sbjct: 236 HFDQINLQLTRTPRRLPILKINKSITRLEDFKYEDFELVGYDPYPPIKGVVAV 288


>gi|148550243|ref|YP_001270345.1| thymidylate synthase [Pseudomonas putida F1]
 gi|166231726|sp|A5WAK1|TYSY_PSEP1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148514301|gb|ABQ81161.1| thymidylate synthase [Pseudomonas putida F1]
          Length = 277

 Score =  349 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 138/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V++ GS + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+
Sbjct: 1   MKSYLDLLTDVLENGSVKGDRTGTGTISVFGRQYRHDLSKGFPLLTTKKLHFKSIVNELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ +L+ +GV IW+EWA ++G+LGP+YG QW +WP  DG  I+QI  +V +L+
Sbjct: 61  WFLSGDTNIKWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              KMALPPCH L+QFYV + KLS  L+ RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENAENGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+P+N AS + LT MLA       GE + +L DVH+Y+NH EQ   Q+SR PR L
Sbjct: 181 SDSFLGLPYNTASLACLTHMLAQQCDMGVGEIVISLSDVHIYSNHMEQVKTQISREPRKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +      +  +++EDF L  Y+PH  I A VS+
Sbjct: 241 PELKLLRKPESIYDYKFEDFELVGYDPHPHIAAPVSI 277


>gi|237746462|ref|ZP_04576942.1| thymidylate synthase,TS [Oxalobacter formigenes HOxBLS]
 gi|229377813|gb|EEO27904.1| thymidylate synthase,TS [Oxalobacter formigenes HOxBLS]
          Length = 277

 Score =  349 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 144/276 (52%), Positives = 194/276 (70%), Gaps = 14/276 (5%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+LL+ +++ G+D+ DRTG GTR+ FG  MR DL  G PLLTTK++H +S++ ELLW
Sbjct: 3   RQYLNLLKEILETGADKGDRTGTGTRAVFGRMMRHDLKNGLPLLTTKRLHIRSIICELLW 62

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G +NV YLH + V+IWDEWA + G+LGPIYG QWRSW   DG   DQ+++++ S+R 
Sbjct: 63  FLQGGTNVRYLHENKVTIWDEWATETGDLGPIYGAQWRSWEGSDGKRYDQVAAVIDSIRE 122

Query: 122 DPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +P SRRHI+SAWNVAL+              KMAL PCH ++QF V  G+LSC + QRSG
Sbjct: 123 NPDSRRHIISAWNVALLPSEKKSPQDNVKDGKMALAPCHVMYQFQVAAGRLSCMMTQRSG 182

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+FLGIP+N AS +LLT M+A   G + GE IH++GD+HLY NHF+QA LQLSR PR LP
Sbjct: 183 DIFLGIPYNTASTALLTHMIARQCGLEPGEVIHSIGDLHLYKNHFDQARLQLSREPRALP 242

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            + +      +  +  +DF +  Y+PH AI A ++V
Sbjct: 243 GLKLKNKP-SIFDYTLDDFEITGYDPHPAIAAPIAV 277


>gi|283457486|ref|YP_003362064.1| thymidylate synthase [Rothia mucilaginosa DY-18]
 gi|283133479|dbj|BAI64244.1| thymidylate synthase [Rothia mucilaginosa DY-18]
          Length = 293

 Score =  349 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 151/285 (52%), Positives = 190/285 (66%), Gaps = 24/285 (8%)

Query: 4   YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           Y DLLR +++   D       R DRTG GT   FG QMRFDL + FPL+TTK+VH+KSV 
Sbjct: 9   YEDLLREILEENKDAIAADAQRSDRTGTGTFGVFGRQMRFDLRESFPLITTKRVHFKSVA 68

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            ELLWFLRG SNV +L   GV+IWDEWAD++G+LGP+YGVQWRSWP  DG  IDQI+ ++
Sbjct: 69  IELLWFLRGSSNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 128

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVF 171
           +SL+ +P SRRHIV+AWN A +D MALPPCH LFQFYV        +LSCQLYQRS D+F
Sbjct: 129 ESLKNNPSSRRHIVTAWNPAEVDSMALPPCHALFQFYVHERADGVKELSCQLYQRSADMF 188

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT----- 226
           LG+PFNIASY+LLT ++A  +G + GEFI T GD H+Y+NH EQ   QL           
Sbjct: 189 LGVPFNIASYALLTYLIAQEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGTDPEGNPY 248

Query: 227 -------LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                   P+++I      +  + YEDF L  Y+ H  I A ++V
Sbjct: 249 PPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGIAAPIAV 293


>gi|326803555|ref|YP_004321373.1| thymidylate synthase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650675|gb|AEA00858.1| thymidylate synthase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 313

 Score =  349 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 155/314 (49%), Positives = 193/314 (61%), Gaps = 51/314 (16%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL+ +++ G D+ DRTGVGTRS FGYQMRFDL +GFP+LTTKKV +  +  ELL
Sbjct: 1   MKQYLDLLQTILEKGHDKSDRTGVGTRSIFGYQMRFDLREGFPILTTKKVAFGLIKSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFLRGD+N+ YL  +   IWDEWA                                    
Sbjct: 61  WFLRGDTNIRYLLENNNHIWDEWAFENWVNSEDYQGPDMTNFGLRAEKDPEFKAEYLKVK 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG +YG QWR W   DG  IDQI++I++ LR +P SRR I+
Sbjct: 121 ADFCQKILNDEDFAKKYGELGNVYGKQWRDWETRDGGSIDQIANILEQLRNNPDSRRIIL 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH L QFYV++GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDVPNMALPPCHTLSQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G + G+F+HT GDVH+YNNHF+Q   QLSR P  LPQ+ I  +   +     +D  L 
Sbjct: 241 EVGLEVGDFVHTFGDVHIYNNHFDQVKEQLSRQPGQLPQLEIKSD-KSMFDLEKDDIVLN 299

Query: 251 SYEPHAAILAKVSV 264
           +Y P   I A V+V
Sbjct: 300 NYHPQTPIKAPVAV 313


>gi|330899097|gb|EGH30516.1| thymidylate synthase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 277

 Score =  349 bits (896), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 136/277 (49%), Positives = 184/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V++ G+ + DRTG GT S FG Q R DLSKGFPLLTTKK+H+KS+V+EL+
Sbjct: 1   MKSYLDLLGDVLENGAQKGDRTGTGTISVFGRQFRHDLSKGFPLLTTKKLHFKSIVNELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+NV +L+ +GV IW+EWA ++G+LGP+YG QW +WP  DG  I+QI  +V +L+
Sbjct: 61  WFLGGDTNVRWLNENGVKIWNEWATEEGDLGPVYGKQWTAWPTKDGGTINQIDYVVNALK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              KMALPPCH L+QFYV + KLS  L+ RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDEKVSPQENARQGKMALPPCHLLYQFYVVDNKLSAHLFIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+P+N AS + LT MLA       GE + +L DVH+Y+NH EQ   Q++R PR L
Sbjct: 181 SDTFLGLPYNTASLACLTHMLAQQCDLDVGEIVISLSDVHIYSNHMEQVKTQIAREPRQL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ +      +  +++EDF +  Y+PH  I A VS+
Sbjct: 241 PELKLLRKPASIYDYKFEDFEVVGYDPHPHIAAPVSI 277


>gi|255326790|ref|ZP_05367866.1| thymidylate synthase [Rothia mucilaginosa ATCC 25296]
 gi|255296007|gb|EET75348.1| thymidylate synthase [Rothia mucilaginosa ATCC 25296]
          Length = 293

 Score =  349 bits (896), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 151/285 (52%), Positives = 189/285 (66%), Gaps = 24/285 (8%)

Query: 4   YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           Y DLLR +++   D       R DRTG GT   FG QMRFDL + FPL+TTK+VH+KSV 
Sbjct: 9   YEDLLREILEENKDAIAADAQRSDRTGTGTFGVFGRQMRFDLRESFPLITTKRVHFKSVA 68

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            ELLWFLRG SNV +L   GV+IWDEWAD++G+LGP+YGVQWRSWP  DG  IDQI+ ++
Sbjct: 69  IELLWFLRGSSNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 128

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVF 171
            SL+ +P SRRHIVSAWN A +D MALPPCH LFQFYV        +LSCQLYQRS D+F
Sbjct: 129 DSLKNNPGSRRHIVSAWNPAEVDNMALPPCHALFQFYVHERADGVKELSCQLYQRSADMF 188

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT----- 226
           LG+PFNIASY+LLT ++A  +G + GEF+ T GD H+Y+NH EQ   QL           
Sbjct: 189 LGVPFNIASYALLTYLIAQEVGMEPGEFVWTGGDCHIYSNHLEQVKKQLGYGTDPEGNPY 248

Query: 227 -------LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                   P+++I      +  + YEDF L  Y+ H  I A ++V
Sbjct: 249 PPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGIAAPIAV 293


>gi|255027643|ref|ZP_05299629.1| thymidylate synthase [Listeria monocytogenes FSL J2-003]
          Length = 314

 Score =  349 bits (896), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRIIEDEAFATKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|195031079|ref|XP_001988286.1| GH10649 [Drosophila grimshawi]
 gi|193904286|gb|EDW03153.1| GH10649 [Drosophila grimshawi]
          Length = 329

 Score =  349 bits (896), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 135/285 (47%), Positives = 178/285 (62%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDLL+ +IK G  R DRT VGT S FG QMRFDL   FPLLTTK+V ++ V  ELLW
Sbjct: 45  QQYLDLLKRIIKTGDQRIDRTAVGTLSIFGTQMRFDLRDSFPLLTTKRVFFRGVAEELLW 104

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G +N   L    V IWD  + ++            G+LGP+YG QWR +        
Sbjct: 105 FVAGKTNAKLLQAKKVHIWDFNSTREFLDKCGHTDRDEGDLGPVYGFQWRHFGAEYRGCD 164

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159
            DY G  +DQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QF+V    G+L
Sbjct: 165 DDYTGQGVDQLQQVIDTIRNNPADRRIIMSAWNPLDIPKMALPPCHCLVQFFVSQSRGEL 224

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQ+YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH E    Q
Sbjct: 225 SCQMYQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLQEQ 284

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + R PR  P++ I   +  +  F Y+DF +  Y P+  I  K++V
Sbjct: 285 MKRVPRPFPKLRIKRQVEKIEDFCYDDFEVVDYNPYEKIQMKMAV 329


>gi|313608068|gb|EFR84144.1| thymidylate synthase [Listeria monocytogenes FSL F2-208]
          Length = 317

 Score =  349 bits (896), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 4   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 64  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 123

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 124 EKFKTRILEDEAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 183

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 184 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 243

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 244 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISLD 303

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 304 GYNPDPAIKAPISV 317


>gi|327440143|dbj|BAK16508.1| thymidylate synthase [Solibacillus silvestris StLB046]
          Length = 325

 Score =  349 bits (896), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 138/320 (43%), Positives = 186/320 (58%), Gaps = 57/320 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           H YL+LL++++  G+D+ DRTG GTRS FGYQMRF+L +GFPLLTTK+V +K V  ELLW
Sbjct: 6   HTYLNLLQYILDNGTDKSDRTGTGTRSVFGYQMRFNLQEGFPLLTTKRVPFKLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL ++   IWDEWA                                     
Sbjct: 66  FIKGDTNIRYLLQNNNHIWDEWAFKKWVESEEYGGPDMSDFGRRSLIDEAFNVQYQKELS 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W   +G  IDQ+   +  ++ +P SRR IV+
Sbjct: 126 TFCERVLQDDEFASKYGDLGNVYGKQWRNWTTSEGESIDQLQDAIDLIKHNPDSRRIIVN 185

Query: 132 AWNVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           AWN   +        K ALPPCH +FQFYV  GKLSC L QRS D FLG+PFNIASY+LL
Sbjct: 186 AWNPEDVIDAGGKGSKAALPPCHAMFQFYVAEGKLSCMLTQRSADTFLGVPFNIASYALL 245

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRY 244
           T ++A   G + GEF+H++ D H+Y+NH EQ   QL+R P+ LP + +N     +  F  
Sbjct: 246 THLIAHECGLEVGEFVHSMADTHIYSNHLEQVKEQLAREPKQLPTLKLNLEKQSIFDFEM 305

Query: 245 EDFTLRSYEPHAAILAKVSV 264
           ED +L  Y PH +I A ++V
Sbjct: 306 EDISLEGYHPHPSIKAPIAV 325


>gi|109706879|gb|ABG43014.1| thymidilate synthase [Candida glabrata]
 gi|109706881|gb|ABG43015.1| thymidilate synthase [Candida glabrata]
 gi|109706883|gb|ABG43016.1| thymidilate synthase [Candida glabrata]
          Length = 298

 Score =  349 bits (896), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 135/290 (46%), Positives = 174/290 (60%), Gaps = 27/290 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL   +IK G  R DRTG GT S F   Q+RF L    FPLLTTKKV  K ++ EL
Sbjct: 9   KQYLDLCERIIKEGEFRPDRTGTGTYSLFAPPQLRFSLKDDTFPLLTTKKVFTKGIILEL 68

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+    ++            G+LGP+YG QWR +      
Sbjct: 69  LWFIAGCTDAKKLSDQGVKIWEGNGSREYLDKMGFVDRREGDLGPVYGFQWRHFGAEYKT 128

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK- 158
              DY G  +DQ+  ++  L+ +PY RR I+SAWN     KMALPPCH   QFYV+  K 
Sbjct: 129 CEDDYTGQGVDQLKEVIHKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFSQFYVNFPKD 188

Query: 159 ----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
               LSC LYQRS D+ LG+PFNIASY+LLT M+A V   + GEFIHTLGD H+Y +H +
Sbjct: 189 GKPQLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVCDMEPGEFIHTLGDAHVYKDHVD 248

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               Q+SR+PR  P++ IN  + D+  F++EDF L  Y+PH  I   +SV
Sbjct: 249 ALKEQISRTPRDFPKLRINRKVSDIDDFKFEDFVLEEYDPHPRIQMNMSV 298


>gi|9626026|ref|NP_040272.1| thymidylate synthase [Saimiriine herpesvirus 2]
 gi|136610|sp|P06854|TYSY_SHV21 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|66442|pir||SYBEHS thymidylate synthase (EC 2.1.1.45) - saimiriine herpesvirus 1
 gi|60391|emb|CAA45693.1| thymidylate synthase [Saimiriine herpesvirus 2]
 gi|330999|gb|AAA46146.1| thymidylate synthase [Saimiriine herpesvirus 2]
 gi|331075|gb|AAA46175.1| dTMP synthase [Saimiriine herpesvirus 2]
          Length = 294

 Score =  349 bits (895), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 132/283 (46%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL  ++H++ +GS + DRTG GT S FG Q RF L   FPLLTTK+V W+ VV ELLW
Sbjct: 12  HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102
           F+RG ++   L   GV IWD    +            +G+LGP+YG QWR +        
Sbjct: 72  FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYKGVG 131

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++ +++ +P  RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC
Sbjct: 132 RDYKGEGVDQLKQLIDTIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT M+A V     GEFIHT+GD H+Y +H +   +QL+
Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVPGEFIHTIGDAHIYVDHIDALKMQLT 251

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P +    N+  +  F+ +D  L +Y PH  I   ++V
Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294


>gi|66556831|ref|XP_624369.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase [Apis mellifera]
          Length = 305

 Score =  348 bits (894), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 138/284 (48%), Positives = 177/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+L+  +IK G+ + DRTGVGT S FG QMRF+L    FPLLTTK+V WK VV ELL
Sbjct: 22  YQYLNLIEKIIKDGTRKDDRTGVGTLSIFGTQMRFNLRNNIFPLLTTKRVFWKGVVEELL 81

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +N   L    V IWD  +             ++G+LGPIYG QWR +       
Sbjct: 82  WFIKGSTNAKKLSEKDVHIWDANSSREFLDSCGFIDREEGDLGPIYGFQWRHFGATYKDM 141

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY+G  IDQ+  ++  +R  P  RR I++AWN   I KMALPPCHC  QFYV N +LS
Sbjct: 142 YKDYNGEGIDQLKEVIDKIRYSPNDRRIIMTAWNPIDIPKMALPPCHCFVQFYVSNEELS 201

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASYSLL  +LA +   + GEFIHT+GD H+Y NH      Q+
Sbjct: 202 CQLYQRSADMGLGVPFNIASYSLLIYILAHITNLKPGEFIHTMGDCHVYLNHISALKEQI 261

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P+  P + I  N+ D+  F   DF L  Y+PHA I   ++V
Sbjct: 262 KRVPKPFPYLKIIRNVEDINDFTANDFELIGYDPHAKISMPMAV 305


>gi|50302825|ref|XP_451349.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640480|emb|CAH02937.1| KLLA0A07843p [Kluyveromyces lactis]
          Length = 312

 Score =  348 bits (894), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 134/292 (45%), Positives = 173/292 (59%), Gaps = 29/292 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
            QYLDL   +I  G  R DRTG GT S F   Q+RF+LS   FPLLTTK+V  K ++ EL
Sbjct: 21  QQYLDLCERIINEGEFRPDRTGTGTYSLFAPPQLRFNLSNDTFPLLTTKRVFTKGIILEL 80

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+    ++            G+LGP+YG QWR +      
Sbjct: 81  LWFVAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYKT 140

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154
              DY G  +DQ+  I+  L+ +PY RR I+SAWN     KMALPPCH   QFYV     
Sbjct: 141 CDDDYSGQGVDQLKEIIHKLKTNPYDRRIILSAWNPPDFPKMALPPCHVFSQFYVSFPKG 200

Query: 155 --DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                +LSC LYQRS D+ LG+PFNIASY+LLT M+A V   + GEFIHTLGD H+Y +H
Sbjct: 201 EGAKPRLSCVLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMEPGEFIHTLGDAHVYKDH 260

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +    Q++R PR  P++ I  N+ D+  F+YEDF +  Y PH  I  K+SV
Sbjct: 261 VDALRTQIAREPRAFPKLKIKRNVSDIDDFKYEDFEITDYNPHGKIQMKMSV 312


>gi|290892999|ref|ZP_06555988.1| thymidylate synthase [Listeria monocytogenes FSL J2-071]
 gi|290557359|gb|EFD90884.1| thymidylate synthase [Listeria monocytogenes FSL J2-071]
          Length = 314

 Score =  348 bits (893), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 152/314 (48%), Positives = 194/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         +K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKTRILEDDAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVTDISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P  AI A +SV
Sbjct: 301 GYNPDPAIKAPISV 314


>gi|259149556|emb|CAY86360.1| Cdc21p [Saccharomyces cerevisiae EC1118]
 gi|323302856|gb|EGA56660.1| Cdc21p [Saccharomyces cerevisiae FostersB]
 gi|323307154|gb|EGA60437.1| Cdc21p [Saccharomyces cerevisiae FostersO]
          Length = 304

 Score =  348 bits (893), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 31/294 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV  + ++ EL
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWFL GD++ + L   GV IWD    ++            G+LGP+YG QWR +      
Sbjct: 71  LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  IDQ+  ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV     
Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190

Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  +LSC LYQRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y 
Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H +    Q+SR+PR  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 251 DHIDALKEQISRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304


>gi|83716002|ref|NP_001032905.1| thymidylate synthase [Bos taurus]
 gi|122144944|sp|Q2TA32|TYSY_BOVIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|83406125|gb|AAI11140.1| Thymidylate synthetase [Bos taurus]
          Length = 354

 Score =  348 bits (893), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 175/320 (54%), Gaps = 58/320 (18%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  R DRTG GT S FG Q R++L   FPLLTTK+V WK V+ ELLWF
Sbjct: 35  QYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRDEFPLLTTKRVFWKGVLEELLWF 94

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 95  IKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWRHFGAEYKDMDS 154

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 155 EYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 214

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ--- 219
           LYQRSGD+ LG+PFNIASY+LLT M+A +   + G+F+HTLGD H+Y NH E    Q   
Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQALM 274

Query: 220 -----------------------------------LSRSPRTLPQMIINPNIVDLLSFRY 244
                                              L R PR  P++ I   +  +  F+ 
Sbjct: 275 ELRGQSSRSLDGDGQAGTSRWAPVATDTERDRCCELQREPRPFPKLKILRKVETIDDFQA 334

Query: 245 EDFTLRSYEPHAAILAKVSV 264
           EDF +  Y P+  I  +++V
Sbjct: 335 EDFQIEGYNPNPTIKMEMAV 354


>gi|148544000|ref|YP_001271370.1| thymidylate synthase [Lactobacillus reuteri DSM 20016]
 gi|184153394|ref|YP_001841735.1| thymidylate synthase [Lactobacillus reuteri JCM 1112]
 gi|227364913|ref|ZP_03848958.1| thymidylate synthase [Lactobacillus reuteri MM2-3]
 gi|325682462|ref|ZP_08161979.1| thymidylate synthase [Lactobacillus reuteri MM4-1A]
 gi|172048237|sp|A5VJK9|TYSY_LACRD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148531034|gb|ABQ83033.1| thymidylate synthase [Lactobacillus reuteri DSM 20016]
 gi|183224738|dbj|BAG25255.1| thymidylate synthase [Lactobacillus reuteri JCM 1112]
 gi|227070060|gb|EEI08438.1| thymidylate synthase [Lactobacillus reuteri MM2-3]
 gi|324978301|gb|EGC15251.1| thymidylate synthase [Lactobacillus reuteri MM4-1A]
          Length = 320

 Score =  348 bits (893), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL+R+V+  G  + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV +  +  ELLW
Sbjct: 8   EQYLDLIRYVLANGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIRFLLQHKNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W    G+ IDQI++++Q ++  P SRR IVS
Sbjct: 128 AFCQRILEDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NH +Q   QL+R+P   P++I+      +  +   D  L  
Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307

Query: 252 YEPHAAILAKVSV 264
           Y    AI A V+V
Sbjct: 308 YTHEPAIKAPVAV 320


>gi|139472812|ref|YP_001129361.1| ORF70 [Human herpesvirus 8]
 gi|6686050|sp|P90463|TYSY_HHV8P RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|1718263|gb|AAC57092.1| ORF 70 [Human herpesvirus 8 type M]
 gi|1778600|gb|AAC56948.1| thymidylate synthase homolog [Human herpesvirus 8]
 gi|2246548|gb|AAB62673.1| ORF 70 [Human herpesvirus 8]
 gi|3551759|gb|AAC34940.1| thymidylate synthase [Human herpesvirus 8]
 gi|87196833|gb|ABD28859.1| ORF70 [Human herpesvirus 8]
 gi|261853484|gb|ACY00406.1| ORF70 [Human herpesvirus 8]
 gi|312275152|gb|ADQ57889.1| ORF70 protein [Human herpesvirus 8]
          Length = 337

 Score =  348 bits (893), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 143/282 (50%), Positives = 182/282 (64%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  LR ++  GSDR DRTG+GT S FG Q R+ L   FPLLTTK+V W+ VV ELLWF
Sbjct: 56  QYLRQLREILCRGSDRLDRTGIGTLSLFGMQARYSLRDHFPLLTTKRVFWRGVVQELLWF 115

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           L+G ++   L R GV IWD+               ++G+LGP+YG QWR +         
Sbjct: 116 LKGSTDSRELSRTGVKIWDKNGSREFLAGRGLAHRREGDLGPVYGFQWRHFGAAYVDADA 175

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G   DQ+S IV  ++ +P+ RR I+ AWN A +  MALPPCH L QFYV +G+LSCQ
Sbjct: 176 DYTGQGFDQLSYIVDLIKNNPHDRRIIMCAWNPADLSLMALPPCHLLCQFYVADGELSCQ 235

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASYSLLT MLA V G + GEFIHTLGD H+Y  H E   LQL+R
Sbjct: 236 LYQRSGDMGLGVPFNIASYSLLTYMLAHVTGLRPGEFIHTLGDAHIYKTHIEPLRLQLTR 295

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I  ++  +  F  +DF L  Y PH  I  +++V
Sbjct: 296 TPRPFPRLEILRSVSSMEEFTPDDFRLVDYCPHPTIRMEMAV 337


>gi|156849051|ref|XP_001647406.1| hypothetical protein Kpol_1018p80 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118092|gb|EDO19548.1| hypothetical protein Kpol_1018p80 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 305

 Score =  348 bits (892), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 135/290 (46%), Positives = 177/290 (61%), Gaps = 28/290 (9%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
           QYL+L + +I  G DR DRTG GT S F   Q+RFDLS   FPLLTTKKV  K ++ ELL
Sbjct: 16  QYLNLCQRIIDEGEDRPDRTGTGTYSIFAPPQLRFDLSGDKFPLLTTKKVFTKGIILELL 75

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+ G ++   L   GV IW+    ++            G+LGP+YG QWR +       
Sbjct: 76  WFIAGCTDGKKLSEQGVKIWEGNGSREYLDSLGLTDRREGDLGPVYGFQWRHFGAEYKTC 135

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD----- 155
             DY G  +DQ+  I+  ++ +PY RR I+SAWN     KMALPPCH   QFYV+     
Sbjct: 136 EDDYTGKGVDQLQEIIYKIKNNPYDRRIIMSAWNPPDFPKMALPPCHVFCQFYVNFPKDG 195

Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
              KLSC LYQRS D+ LG+PFNIASY+LLT M+A +   + GEFIHT+GD H+Y +H E
Sbjct: 196 SKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHICDMEAGEFIHTMGDAHVYKDHIE 255

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               Q+SR+PR  P++ I  +I D+  F++EDF +  Y PH  I  K+SV
Sbjct: 256 ALQEQMSRTPREFPKLKIKRDIKDINDFKFEDFEIVDYHPHGKIQMKMSV 305


>gi|16117371|gb|AAL14421.1|AF188480_3 thymidylate synthase [Macropodid herpesvirus 1]
          Length = 316

 Score =  348 bits (892), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 136/282 (48%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  +  +++ G  + DRTG GT S FG Q R++L   FPLLTTK+V+WK VV ELLWF
Sbjct: 35  QYLYQVARILREGYRKGDRTGTGTLSVFGTQARYNLRGEFPLLTTKRVYWKGVVEELLWF 94

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           +RG +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 95  VRGATNTKELSSRGVKIWDAHGSRDFLDKRGFPSREEGDLGPVYGFQWRHFGAEYRGSEA 154

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G   DQ+  ++ +L+ +P  RR ++ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 155 DYSGQGADQLQYVIDTLKRNPDDRRIVMCAWNPKDLPLMALPPCHTLCQFYVANGELSCQ 214

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V+G   GE +HTLGD H+Y NH E+  +QL R
Sbjct: 215 LYQRSGDMGLGVPFNIASYALLTYMIAHVVGLVPGELVHTLGDAHIYLNHIERLRIQLQR 274

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  PQ+ I   +  +  FR EDF L  Y PH+A+  +++V
Sbjct: 275 EPRPFPQLKIIRAVTSIDYFRSEDFVLEGYRPHSALKMELAV 316


>gi|9631261|ref|NP_048042.1| thymidylate synthase [Ateline herpesvirus 3]
 gi|4019297|gb|AAC95595.1| thymidylate synthase [Ateline herpesvirus 3]
          Length = 290

 Score =  348 bits (892), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 133/283 (46%), Positives = 176/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL  ++H++  G+ + DRTGVGT S FG Q R+ L K FPLLTTK+V W+ VV ELLW
Sbjct: 8   HQYLSQVKHILNCGNFKHDRTGVGTLSVFGMQSRYSLEKDFPLLTTKRVFWRGVVEELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSW-------- 101
           F+RG ++   L   GV IWD                ++G+LGP+YG QWR +        
Sbjct: 68  FIRGSTDSKELAASGVHIWDANGSRSYLDKLGFCDREEGDLGPVYGFQWRHFGAEYQGLK 127

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y G  +DQ+  I+ ++  +P  RR ++ AWNV  + KMALPPCH L QFYV +GKLSC
Sbjct: 128 HNYGGEGVDQLKQIINTIHTNPTDRRMLMCAWNVLDVPKMALPPCHVLSQFYVCDGKLSC 187

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT M+A V     GEFIHTLGD H+Y NH +    QL+
Sbjct: 188 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTDLVPGEFIHTLGDAHIYVNHIDALTEQLT 247

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P +     I  +  F+  D  L +Y P+ +I   ++V
Sbjct: 248 RTPRPFPTLKFARKIASIDDFKANDIILENYNPYPSIKMPMAV 290


>gi|81428612|ref|YP_395612.1| thymidylate synthase [Lactobacillus sakei subsp. sakei 23K]
 gi|123755841|sp|Q38WX8|TYSY_LACSS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|78610254|emb|CAI55303.1| Thymidylate synthase [Lactobacillus sakei subsp. sakei 23K]
          Length = 316

 Score =  348 bits (892), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 145/311 (46%), Positives = 186/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R +++ G  + DRT  GT S FGYQMRF+L +GFPLLTTKK+ +  +  ELLWFL
Sbjct: 6   YLDLARTILEEGHYKGDRTNTGTYSLFGYQMRFNLQEGFPLLTTKKMPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADK------------------------------------- 86
           +GDSN+ YL +H   IWDEWA +                                     
Sbjct: 66  KGDSNIRYLLQHNNHIWDEWAFERFVKSTDYTGPDMTDFSHRAQDDADFKVVYQEQMRLF 125

Query: 87  -------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         GELG IYG QWR+W    G  IDQI ++++ ++ +P SRR IVSAW
Sbjct: 126 NDRILADEGFAKQYGELGDIYGKQWRAWQTRSGETIDQIKNVIEMIKTNPDSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV++GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHTLGD H+Y+NH  Q   QL+RS    P++ +NP+   +  F   D  + +YE
Sbjct: 246 LEVGEFIHTLGDAHIYSNHVTQVKTQLARSMHAAPKLWLNPDKKSIFDFDVADIKVENYE 305

Query: 254 PHAAILAKVSV 264
              AI A V+V
Sbjct: 306 SEPAIKAPVAV 316


>gi|298345140|ref|YP_003717827.1| thymidylate synthase [Mobiluncus curtisii ATCC 43063]
 gi|315656496|ref|ZP_07909385.1| thymidylate synthase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|298235201|gb|ADI66333.1| thymidylate synthase [Mobiluncus curtisii ATCC 43063]
 gi|315493055|gb|EFU82657.1| thymidylate synthase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 272

 Score =  348 bits (892), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 134/263 (50%), Positives = 183/263 (69%), Gaps = 2/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DLL  ++  G ++ DRTG GTRS FG Q+R+DLS+GFP +TTK ++W  VV ELLW
Sbjct: 12  HQYEDLLADIMSHGVEKPDRTGTGTRSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G +N  +L  + + IWDEWAD+ G+LGPIYG QWR+WP   G  +DQ+  ++++L+ 
Sbjct: 72  FLQGGTNNRWLQENNIHIWDEWADESGDLGPIYGHQWRAWPTAAG-PVDQVKKLLETLQN 130

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV+ +D+MAL PCH  FQ +V  G+LS Q+YQRS D+FLG+PFNIASY
Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA     Q GE + T GD H+Y+NH +Q  LQLSR P   P + ++     +  
Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFPILELD-KAESIDG 249

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + ++   L +Y+ H  I A V+V
Sbjct: 250 YTFDMIRLANYQHHPKISAPVAV 272


>gi|136609|sp|P12462|TYSY_HSVAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|331064|gb|AAA46170.1| thymidylate synthase [Ateline herpesvirus 2]
          Length = 290

 Score =  348 bits (892), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 132/283 (46%), Positives = 176/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL  ++H++  G+ + DRTGVGT S FG Q R+ L K FPLLTTK+V W+ VV ELLW
Sbjct: 8   HQYLSQVKHILNCGNFKHDRTGVGTLSVFGMQSRYSLEKDFPLLTTKRVFWRGVVEELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW-------- 101
           F+RG ++   L   GV IWD                ++G+LGP+YG QWR +        
Sbjct: 68  FIRGSTDSKELAASGVHIWDANGSRSYLDKLGLFDREEGDLGPVYGFQWRHFGAEYQGLK 127

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y G  +DQ+  I+ ++  +P  RR ++ AWNV  + KMALPPCH L QFYV +GKLSC
Sbjct: 128 HNYGGEGVDQLKQIINTIHTNPTDRRMLMCAWNVLDVPKMALPPCHVLSQFYVCDGKLSC 187

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT M+A V     GEFIHTLGD H+Y NH +    QL+
Sbjct: 188 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTDLVPGEFIHTLGDAHVYVNHVDALTEQLT 247

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P +     +  +  F+  D  L +Y P+ +I   ++V
Sbjct: 248 RTPRPFPTLKFARKVASIDDFKANDIILENYNPYPSIKMPMAV 290


>gi|323331459|gb|EGA72874.1| Cdc21p [Saccharomyces cerevisiae AWRI796]
          Length = 302

 Score =  348 bits (892), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 135/294 (45%), Positives = 176/294 (59%), Gaps = 31/294 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV  + ++ EL
Sbjct: 9   EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 68

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWFL GD++ + L   GV IWD    ++            G+LGP+YG QWR +      
Sbjct: 69  LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 128

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  IDQ+  ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV     
Sbjct: 129 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 188

Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  +LSC LYQRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y 
Sbjct: 189 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 248

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H +    Q++R+PR  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 249 DHIDALKEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 302


>gi|289435221|ref|YP_003465093.1| hypothetical protein lse_1858 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171465|emb|CBH28009.1| thyA [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 314

 Score =  348 bits (892), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 149/314 (47%), Positives = 192/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L  GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 ESFKIRILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G   GEF+HT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L 
Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P A+I A +SV
Sbjct: 301 GYNPDASIKAPISV 314


>gi|30348576|emb|CAC84368.1| thymidylate synthase [Saimiriine herpesvirus 2]
          Length = 294

 Score =  348 bits (892), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 132/283 (46%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL  ++H++ +GS + DRTG GT S FG Q RF L   FPLLTTK+V W+ VV ELLW
Sbjct: 12  HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102
           F+RG ++   L   GV IWD    +            +G+LGP+YG QWR +        
Sbjct: 72  FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYRGSK 131

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++ +++ +P  RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC
Sbjct: 132 RDYKGEGVDQLKQLIATIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT M+A V     GEFIHT+GD H+Y +H +   +QL+
Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVPGEFIHTIGDAHIYVDHIDALKMQLT 251

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P +    N+  +  F+ +D  L +Y PH  I   ++V
Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294


>gi|7330001|gb|AAF59990.1|AF210726_11 thymidylate synthetase [Rhesus monkey rhadinovirus H26-95]
          Length = 333

 Score =  348 bits (892), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  L  +IK G  R DRTGVGTRS FG Q R++L   FPLLTTK+V W+ VV ELLWF
Sbjct: 52  QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP-------- 102
           +RG ++ + L R GV IWD    +            +G+LGP+YG QWR +         
Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y+G  +DQ+  +V  +   P+ RR ++ AWN A + +MALPPCH L QFYV  G+LSCQ
Sbjct: 172 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRS D+ LG+PFNIASY+LLT ++A V G   G+F+HTLGD H+YNNH +   LQL R
Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 291

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   +  L  F   D +L  Y+PH  I  +++V
Sbjct: 292 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 333


>gi|83578104|ref|NP_014717.2| Cdc21p [Saccharomyces cerevisiae S288c]
 gi|136618|sp|P06785|TYSY_YEAST RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName:
           Full=Cell division cycle protein 21; AltName:
           Full=Constitutive RNR3 transcription protein 9
 gi|172990|gb|AAA60940.1| thymidylate synthase [Saccharomyces cerevisiae]
 gi|2104886|emb|CAA94559.1| YOR29-25 [Saccharomyces cerevisiae]
 gi|190407409|gb|EDV10676.1| thymidylate synthase [Saccharomyces cerevisiae RM11-1a]
 gi|256270905|gb|EEU06037.1| Cdc21p [Saccharomyces cerevisiae JAY291]
 gi|285814960|tpg|DAA10853.1| TPA: Cdc21p [Saccharomyces cerevisiae S288c]
 gi|323352068|gb|EGA84605.1| Cdc21p [Saccharomyces cerevisiae VL3]
          Length = 304

 Score =  348 bits (892), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 135/294 (45%), Positives = 176/294 (59%), Gaps = 31/294 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV  + ++ EL
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWFL GD++ + L   GV IWD    ++            G+LGP+YG QWR +      
Sbjct: 71  LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  IDQ+  ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV     
Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190

Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  +LSC LYQRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y 
Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H +    Q++R+PR  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 251 DHIDALKEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304


>gi|313632688|gb|EFR99662.1| thymidylate synthase [Listeria seeligeri FSL N1-067]
          Length = 314

 Score =  347 bits (891), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 150/314 (47%), Positives = 192/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L  GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 ESFKTRILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G   GEF+HT+GD HLYNNH EQ   QLSR+P  LP++I++     +  F   D +L 
Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLILSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P A+I A +SV
Sbjct: 301 GYNPDASIKAPISV 314


>gi|331073|gb|AAA46174.1| thymidylate synthase [Saimiriine herpesvirus 2]
          Length = 294

 Score =  347 bits (891), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 132/283 (46%), Positives = 178/283 (62%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQYL  ++H++ +GS + DRTG GT S FG Q RF L   FPLLTTK+V W+ VV ELLW
Sbjct: 12  HQYLSQVQHILNYGSFKNDRTGTGTLSIFGTQSRFSLENEFPLLTTKRVFWRGVVEELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102
           F+RG ++   L   GV IWD    +            +G+LGP+YG QWR +        
Sbjct: 72  FIRGSTDSKELSAAGVHIWDANGSRSFLDKLGFYDRDEGDLGPVYGFQWRHFGAEYKGVG 131

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++ +++ +P  RR ++ AWNV+ I KM LPPCH L QFYV +GKLSC
Sbjct: 132 RDYKGEGVDQLKQLIDTIKTNPTDRRMLMCAWNVSDIPKMVLPPCHVLSQFYVCDGKLSC 191

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRS D+ LG+PFNIASYSLLT M+A V     GEFIHT+GD H+Y +H +   +QL+
Sbjct: 192 QLYQRSADMGLGVPFNIASYSLLTCMIAHVTNLVLGEFIHTIGDAHIYVDHIDALKMQLT 251

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P +    N+  +  F+ +D  L +Y PH  I   ++V
Sbjct: 252 RTPRPFPTLRFARNVSCIDDFKADDIILENYNPHPIIKMHMAV 294


>gi|18653820|ref|NP_570754.1| thymidylate synthase [Macacine herpesvirus 5]
 gi|5823015|gb|AAD53009.1|AF087411_2 thymidylate synthase [Macacine herpesvirus 5]
 gi|4494918|gb|AAD21340.1| thymidylate synthase [Macaca mulatta rhadinovirus 17577]
          Length = 333

 Score =  347 bits (891), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  L  +IK G  R DRTGVGTRS FG Q R++L   FPLLTTK+V W+ VV ELLWF
Sbjct: 52  QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP-------- 102
           +RG ++ + L R GV IWD    +            +G+LGP+YG QWR +         
Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y+G  +DQ+  +V  +   P+ RR ++ AWN A + +MALPPCH L QFYV  G+LSCQ
Sbjct: 172 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRS D+ LG+PFNIASY+LLT ++A V G   G+F+HTLGD H+YNNH +   LQL R
Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 291

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   +  L  F   D +L  Y+PH  I  +++V
Sbjct: 292 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 333


>gi|256851235|ref|ZP_05556624.1| thymidylate synthase [Lactobacillus jensenii 27-2-CHN]
 gi|260660659|ref|ZP_05861574.1| thymidylate synthase [Lactobacillus jensenii 115-3-CHN]
 gi|282934702|ref|ZP_06339945.1| thymidylate synthase [Lactobacillus jensenii 208-1]
 gi|297206102|ref|ZP_06923497.1| thymidylate synthase [Lactobacillus jensenii JV-V16]
 gi|256616297|gb|EEU21485.1| thymidylate synthase [Lactobacillus jensenii 27-2-CHN]
 gi|260548381|gb|EEX24356.1| thymidylate synthase [Lactobacillus jensenii 115-3-CHN]
 gi|281301277|gb|EFA93578.1| thymidylate synthase [Lactobacillus jensenii 208-1]
 gi|297149228|gb|EFH29526.1| thymidylate synthase [Lactobacillus jensenii JV-V16]
          Length = 318

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 148/313 (47%), Positives = 181/313 (57%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+++++ G D+ DRTG GTRS FG QMRFDLS+GFPLLTTKKV +  +  ELLW
Sbjct: 6   QPYLDLLKNIMETGHDKTDRTGTGTRSRFGAQMRFDLSEGFPLLTTKKVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L  H   IWDEWA                                     
Sbjct: 66  FLRGDTNIKFLLEHNNHIWDEWAFKKWVNSDDYHGPDMTDFGLRSQADSEFKKQYDEQMQ 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G LG +YG QWR W    G  IDQI  ++  L   P SRR IVS
Sbjct: 126 IFTKRILEDADFAKKFGNLGDVYGAQWRHWKKRSGGSIDQIQEVLNQLTIHPDSRRMIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV + KLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDVPTSALPPCHTLFQFYVADNKLSLQLYQRSGDMFLGVPFNIASYSLLLSLVARQ 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q + QLSR P   P++ +NP   D+  F  ED  +  
Sbjct: 246 TGLEVGEFVHTLGDAHIYKNHFDQVEKQLSRDPFDSPKLWLNPAKKDISDFEMEDIKVVD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YKHHGVIKAPVAV 318


>gi|304390727|ref|ZP_07372679.1| thymidylate synthase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304325610|gb|EFL92856.1| thymidylate synthase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 272

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 134/263 (50%), Positives = 183/263 (69%), Gaps = 2/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DLL  ++  G ++ DRTG GTRS FG Q+R+DLS+GFP +TTK ++W  VV ELLW
Sbjct: 12  HQYEDLLADIMSHGVEKSDRTGTGTRSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G +N  +L  + + IWDEWAD+ G+LGPIYG QWR+WP   G  +DQ+  ++++L+ 
Sbjct: 72  FLQGGTNNRWLQENNIHIWDEWADESGDLGPIYGHQWRAWPTAAG-PVDQVKKLLETLQN 130

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV+ +D+MAL PCH  FQ +V  G+LS Q+YQRS D+FLG+PFNIASY
Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA     Q GE + T GD H+Y+NH +Q  LQLSR P   P + ++     +  
Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFPILELD-KAESIDG 249

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + ++   L +Y+ H  I A V+V
Sbjct: 250 YTFDMIRLANYQHHPKISAPVAV 272


>gi|332666783|ref|YP_004449571.1| Thymidylate synthase [Haliscomenobacter hydrossis DSM 1100]
 gi|332335597|gb|AEE52698.1| Thymidylate synthase [Haliscomenobacter hydrossis DSM 1100]
          Length = 301

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 163/306 (53%), Positives = 200/306 (65%), Gaps = 47/306 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  LL+H++K G  + DRTG GT S FGYQ+RFDL+ GFPL+TTKKVH KS++HELL
Sbjct: 1   MQQYHTLLQHILKNGVRKHDRTGTGTISVFGYQVRFDLNDGFPLITTKKVHIKSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL+GD+N+ YL R+GV IW+EW                                     
Sbjct: 61  WFLKGDTNIQYLVRNGVGIWNEWPFQFWLQNENPDLAQTKYSPAWKDKLSEFVERIKTDD 120

Query: 85  ---DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
               + G LGP+YG QWR++       +DQI  +V  +R  P SRR +VSAWN   I  M
Sbjct: 121 DFATQWGNLGPVYGQQWRNF-----EGVDQIVQVVNDIRRSPDSRRLLVSAWNPKEIPVM 175

Query: 142 ---ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
               LPPCH LFQFYV  GKLSCQLYQRS DVFLG+PFNIASY+LLT+M+A V G Q GE
Sbjct: 176 VKSGLPPCHALFQFYVAEGKLSCQLYQRSADVFLGVPFNIASYALLTLMMAQVCGLQPGE 235

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           FIH+ GD HLY NH EQA +QLSR PR+LPQM +NP + ++  F+YEDFTL  Y+P+ AI
Sbjct: 236 FIHSFGDAHLYLNHLEQAQIQLSRQPRSLPQMKLNPAVREIFDFQYEDFTLSDYDPYPAI 295

Query: 259 LAKVSV 264
            A+VSV
Sbjct: 296 KAEVSV 301


>gi|227543427|ref|ZP_03973476.1| thymidylate synthase [Lactobacillus reuteri CF48-3A]
 gi|300910094|ref|ZP_07127554.1| thymidylate synthase [Lactobacillus reuteri SD2112]
 gi|227186579|gb|EEI66650.1| thymidylate synthase [Lactobacillus reuteri CF48-3A]
 gi|300892742|gb|EFK86102.1| thymidylate synthase [Lactobacillus reuteri SD2112]
          Length = 320

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL+R+V+  G  + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV +  +  ELLW
Sbjct: 8   EQYLDLIRYVLTNGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIRFLLQHKNHIWDEWAFKKWVESAEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W    G+ IDQI++++Q ++  P SRR IVS
Sbjct: 128 AFCQRILEDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NH +Q   QL+R+P   P++I+      +  +   D  L  
Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307

Query: 252 YEPHAAILAKVSV 264
           Y    AI A V+V
Sbjct: 308 YTYEPAIKAPVAV 320


>gi|90415501|ref|ZP_01223435.1| thymidylate synthase [marine gamma proteobacterium HTCC2207]
 gi|90332824|gb|EAS47994.1| thymidylate synthase [marine gamma proteobacterium HTCC2207]
          Length = 301

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 149/306 (48%), Positives = 196/306 (64%), Gaps = 47/306 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++H+   G  + DRT  GT+S FG+QMRFDLS+GFPL+TTKKVH KS++HELL
Sbjct: 1   MKQYLDLIKHIRDHGVKKEDRTATGTQSIFGHQMRFDLSQGFPLVTTKKVHLKSILHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIW---------------------------------------D 81
           WF+RGD+N+ YL  +GV IW                                       D
Sbjct: 61  WFIRGDTNIRYLVENGVGIWNDWPYQSWLRETDQEADFPMYSPEWKAKMKEFIQRIKDDD 120

Query: 82  EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           E+A + G+LGP+YG QWR++       +DQ++ +V+ ++++P SRR IVSAWN   I  M
Sbjct: 121 EFAQQYGDLGPVYGHQWRNF-----EGVDQLAQVVEDIKSNPDSRRLIVSAWNPKDIPVM 175

Query: 142 ---ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
               LPPCH LFQFYV  G+LSCQLYQRS DVFLG+PFNIASY++LT+M+A V G + G+
Sbjct: 176 VKSGLPPCHSLFQFYVTEGRLSCQLYQRSADVFLGVPFNIASYAILTLMIAQVTGLEPGD 235

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           F+HT GD HLY+NH +Q +  LSR    LP + INP + +L  F +EDF L  Y+ H  I
Sbjct: 236 FVHTFGDAHLYSNHMDQVEELLSRETYPLPTLAINPAVDNLFDFVFEDFELLDYQSHGPI 295

Query: 259 LAKVSV 264
            A V+V
Sbjct: 296 SAPVAV 301


>gi|300742119|ref|ZP_07072140.1| thymidylate synthase [Rothia dentocariosa M567]
 gi|300381304|gb|EFJ77866.1| thymidylate synthase [Rothia dentocariosa M567]
          Length = 302

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 151/285 (52%), Positives = 191/285 (67%), Gaps = 24/285 (8%)

Query: 4   YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           Y DLLR ++    D       R+DRTG GT   FG QMRFDL   FPL+TTK+VH+KSV 
Sbjct: 18  YEDLLREILDENRDAIAADAQRKDRTGTGTFGVFGRQMRFDLRDSFPLITTKRVHFKSVA 77

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            ELLWFLRG SN+ +L   GV+IWDEWAD++G+LGP+YGVQWRSWP  DG  IDQI+ ++
Sbjct: 78  VELLWFLRGSSNIRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 137

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVF 171
           +SL+ +P SRRHIVSAWN A +D+MALPPCH +FQFYV        +LSCQLYQRS D+F
Sbjct: 138 ESLKTNPSSRRHIVSAWNPAEVDEMALPPCHAMFQFYVHERPDGVKELSCQLYQRSADMF 197

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SRSPR---- 225
           LG+PFNIASY+LLT ++A  +G + GEFI T GD H+Y+NH EQ   QL     P     
Sbjct: 198 LGVPFNIASYALLTYLIAHEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGNDPEGNPY 257

Query: 226 ------TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                   P+++I      +  + YEDF L  Y+ H  I A ++V
Sbjct: 258 PPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGISAPIAV 302


>gi|300361883|ref|ZP_07058060.1| thymidylate synthase [Lactobacillus gasseri JV-V03]
 gi|300354502|gb|EFJ70373.1| thymidylate synthase [Lactobacillus gasseri JV-V03]
          Length = 327

 Score =  346 bits (889), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 143/313 (45%), Positives = 183/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRF+LS GFP+LTTK+V +  +  ELLW
Sbjct: 15  QPYLDLLNKIMTEGHDKEDRTGTGTRSLFGAQMRFNLSDGFPILTTKRVPFGLIKSELLW 74

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 75  FLRGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDTKFKKVYQEEMK 134

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVS
Sbjct: 135 RFGERILADQDFAAKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 194

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 195 AWNPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQE 254

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHTLGD H+Y NHF+Q    L+R P   P++ +NP+   +  F   D  L +
Sbjct: 255 TGLKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVN 314

Query: 252 YEPHAAILAKVSV 264
           Y+ H+ I A V+V
Sbjct: 315 YKHHSTIKAPVAV 327


>gi|323335494|gb|EGA76779.1| Cdc21p [Saccharomyces cerevisiae Vin13]
 gi|323346516|gb|EGA80803.1| Cdc21p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 304

 Score =  346 bits (889), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 135/294 (45%), Positives = 175/294 (59%), Gaps = 31/294 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV  + ++ EL
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWFL GD++ + L   GV IWD    ++            G+LGP+YG QWR +      
Sbjct: 71  LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  IDQ+  ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV     
Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKE 190

Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  +LSC LYQRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y 
Sbjct: 191 GEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYK 250

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H +    Q+ R+PR  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 251 DHIDALKEQIXRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304


>gi|227498216|ref|ZP_03928387.1| thymidylate synthase [Actinomyces urogenitalis DSM 15434]
 gi|226832398|gb|EEH64781.1| thymidylate synthase [Actinomyces urogenitalis DSM 15434]
          Length = 295

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 140/264 (53%), Positives = 181/264 (68%), Gaps = 4/264 (1%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +LL  V+  G+ + DRTG GTRS F  Q+R+DLS+GFP +TTK V  K+V  ELLWFL
Sbjct: 33  YEELLAEVLLDGAPKGDRTGTGTRSLFARQLRYDLSQGFPRVTTKFVAMKAVKGELLWFL 92

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           +G SN+++LH  G++IWDEWAD+ GELGP+YGVQWRSWP   G  IDQI+ ++ +LR DP
Sbjct: 93  QGASNIAWLHEQGITIWDEWADEHGELGPVYGVQWRSWPSRRGEAIDQITQLIHTLRHDP 152

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
            SRR +VSAWNV+ +  MAL PCH  FQ YV +G+LS Q+YQRS D+FLG+PFNIASY+L
Sbjct: 153 DSRRMLVSAWNVSELGAMALAPCHAFFQCYVADGRLSLQVYQRSADLFLGVPFNIASYAL 212

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDLLS 241
           LT MLA   G + GE + T GD H+Y+NH  Q   QLSR P     P + +  +   + S
Sbjct: 213 LTHMLAQQAGLEPGELVWTGGDCHIYDNHLAQVREQLSRVPQAYAFPTLRL-RHAESIDS 271

Query: 242 FRYEDFTLR-SYEPHAAILAKVSV 264
           +  ED      Y+ H  I A V+V
Sbjct: 272 YTMEDIDASAGYQHHPVIKAPVAV 295


>gi|149601|gb|AAA25255.1| thymidylate synthase [Lactobacillus casei]
          Length = 329

 Score =  346 bits (888), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 17  QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 76

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 77  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 136

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 137 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 196

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 197 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 256

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 257 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 316

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 317 YDPYPAIKAPVAV 329


>gi|91093359|ref|XP_969294.1| PREDICTED: similar to thymidylate synthase [Tribolium castaneum]
 gi|270015300|gb|EFA11748.1| hypothetical protein TcasGA2_TC004238 [Tribolium castaneum]
          Length = 313

 Score =  346 bits (888), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 130/283 (45%), Positives = 178/283 (62%), Gaps = 21/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL  +R +++ G  R DRT +GT S FG QMR+ L    FPLLTTK+V W++VV ELL
Sbjct: 30  YQYLSHIRQILEKGVQRMDRTRIGTLSIFGVQMRYSLRDNVFPLLTTKRVFWRAVVEELL 89

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +N + L    V IWD  +             ++G+LGPIYG QWR +       
Sbjct: 90  WFIKGSTNSNDLKEKNVHIWDANSSRAFLDSVGLEEYEEGDLGPIYGFQWRHFGAEYKGV 149

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    +DQ++ ++ ++R +P  RR I+SAWN   + KMALPPCHCL QF+V  G+LS
Sbjct: 150 QGDYTNEGVDQLARVIHTIRTNPNDRRIIMSAWNPKDLHKMALPPCHCLAQFFVAEGELS 209

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQR+GD+ LG+PFNIASY+LLT M+A V G + GEFIH++GD H+Y NH E    QL
Sbjct: 210 CLLYQRAGDMGLGVPFNIASYALLTRMIAHVTGLKPGEFIHSIGDSHVYLNHVEPIKEQL 269

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           +R PR  P + I   +  +  F +EDF L  Y PH  +   ++
Sbjct: 270 TRVPRAFPTLNIKRPVSSIDDFTFEDFELVGYNPHPKLYLPMA 312


>gi|212550867|ref|YP_002309184.1| thymidylate synthase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
 gi|212549105|dbj|BAG83773.1| thymidylate synthase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
          Length = 256

 Score =  346 bits (888), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 146/264 (55%), Positives = 188/264 (71%), Gaps = 8/264 (3%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL   V+  G  ++DRT  GT S FGY M F+L  GFPLLTTKK+H K ++HELL
Sbjct: 1   MKQYLDLCNRVLSEGVKKKDRTCTGTVSIFGYHMHFNLKDGFPLLTTKKLHVKPIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WF++GD+N+ YL+ HGV IWD+WA+K+G+LGPIYG QW           +Q+ + V +++
Sbjct: 61  WFIKGDTNIKYLNDHGVYIWDKWANKNGDLGPIYGKQWNFK--------NQLRTAVDNIK 112

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IV++WNV  +  MALPPCH LFQFY+ NG+LS Q+YQRS D+FLG+PFNIAS
Sbjct: 113 NNPDSRRIIVNSWNVKDLTSMALPPCHVLFQFYISNGELSLQMYQRSADIFLGLPFNIAS 172

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLL  M+A V   + G+FIH LGD H+Y NH EQ  LQL+RSP+TLP M IN  +  + 
Sbjct: 173 YSLLLKMVAQVTNLKEGKFIHVLGDAHIYLNHLEQIQLQLTRSPKTLPIMKINSEVKSIF 232

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            F+YEDF L  Y P+  I  +VSV
Sbjct: 233 DFKYEDFELERYTPYPHIKGEVSV 256


>gi|315303800|ref|ZP_07874296.1| thymidylate synthase [Listeria ivanovii FSL F6-596]
 gi|313627829|gb|EFR96466.1| thymidylate synthase [Listeria ivanovii FSL F6-596]
          Length = 314

 Score =  346 bits (888), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 151/314 (48%), Positives = 193/314 (61%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL  GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQAGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSSDYTGEDMTDFGLRAEKDPAFKEVYQTEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 EKFKARILEEEEFASKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   I  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
            +G   GEFIHT+GD HLYNNH EQ   QL+R+P  LP+++++     +  F   D +L 
Sbjct: 241 EVGLDVGEFIHTMGDAHLYNNHIEQVKEQLTRTPHALPKLVLSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P +AI A +SV
Sbjct: 301 GYNPDSAIKAPISV 314


>gi|199598695|ref|ZP_03212109.1| thymidylate synthase [Lactobacillus rhamnosus HN001]
 gi|258508392|ref|YP_003171143.1| thymidylate synthase [Lactobacillus rhamnosus GG]
 gi|199590383|gb|EDY98475.1| thymidylate synthase [Lactobacillus rhamnosus HN001]
 gi|257148319|emb|CAR87292.1| Thymidylate synthase [Lactobacillus rhamnosus GG]
 gi|259649706|dbj|BAI41868.1| thymidylate synthase [Lactobacillus rhamnosus GG]
          Length = 316

 Score =  346 bits (888), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHKNHIWDEWAFEKWVKSDEYRGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|262198580|ref|YP_003269789.1| thymidylate synthase [Haliangium ochraceum DSM 14365]
 gi|262081927|gb|ACY17896.1| thymidylate synthase [Haliangium ochraceum DSM 14365]
          Length = 262

 Score =  346 bits (887), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 141/264 (53%), Positives = 173/264 (65%), Gaps = 2/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL+R +++ G  R DRTG GT S FG Q+R+DL +GFPLLTTKKV + +VVHELL
Sbjct: 1   MTPYLDLVRRILEHGERREDRTGTGTLSLFGAQLRYDLREGFPLLTTKKVLFSAVVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRG +N+         IW+ WAD  GELGPIYG QWRSW   DG+ IDQI   +  +R
Sbjct: 61  WFLRGATNIHDGLAEHTPIWNAWADDSGELGPIYGAQWRSWRGPDGDSIDQIQGALDLIR 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  + +MALPPCH LFQFYV    L CQLYQRS D+ LG+PFNIAS
Sbjct: 121 TDPGSRRIIVSAWNVGELARMALPPCHLLFQFYVSGRHLDCQLYQRSADMALGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A     +   FIHTLGD H+Y NH +  + QL R+P   P++ I      L 
Sbjct: 181 YALLLSMMAQSCDLEPRYFIHTLGDAHVYLNHVDGLERQLERTPYARPRVRIAD--KSLF 238

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
              +ED  L  Y+ H  I  +V+V
Sbjct: 239 ELGFEDIELEGYQHHPFIKFEVAV 262


>gi|46519351|gb|AAS99999.1| JM22 [Macaca fuscata rhadinovirus]
          Length = 333

 Score =  346 bits (887), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 135/282 (47%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  L  +I+ G  R DRTGVGTRS FG Q R++L   FPLLTTK+V W+ VV ELLWF
Sbjct: 52  QYLAHLDLIIRHGVQRDDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 111

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP-------- 102
           +RG ++ + L R GV IWD    +            +G+LGP+YG QWR +         
Sbjct: 112 IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 171

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY+G  +DQ+  +V  +   P+ RR ++ AWN A + +MALPPCH L QFYV  G+LSCQ
Sbjct: 172 DYEGQGVDQLRYVVDLIVRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 231

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRS D+ LG+PFNIASY+LLT ++A V G   G+F+HTLGD H+YNNH     LQL R
Sbjct: 232 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVGPLLLQLGR 291

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   +  L  F   D +L  Y+PH  I  +++V
Sbjct: 292 TPRPFPRLKILRKVTRLEDFTRADLSLEGYDPHPHIEMEMAV 333


>gi|229552189|ref|ZP_04440914.1| thymidylate synthase [Lactobacillus rhamnosus LMS2-1]
 gi|229314491|gb|EEN80464.1| thymidylate synthase [Lactobacillus rhamnosus LMS2-1]
          Length = 325

 Score =  345 bits (886), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 13  QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 72

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 73  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 132

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 133 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 192

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 193 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 252

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 253 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 312

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 313 YDPYPAIKAPVAV 325


>gi|256075176|ref|XP_002573896.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Schistosoma mansoni]
 gi|238659087|emb|CAZ30129.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Schistosoma mansoni]
          Length = 577

 Score =  345 bits (886), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 130/281 (46%), Positives = 179/281 (63%), Gaps = 21/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHELLWF 62
           YL+LLR+++  G +RRDRT  GT   FG Q+RF L    +PLLTTK V ++ +V ELLWF
Sbjct: 296 YLNLLRYILANGVERRDRTDTGTFGVFGPQLRFSLRNHEYPLLTTKTVFFRGIVEELLWF 355

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRS--------WP 102
           +RG +N   L    V  WD                ++G+LGP+YG QWR           
Sbjct: 356 IRGSTNSRELAEKNVHFWDANGSREFLDGLGFTEREEGDLGPVYGFQWRHSGAEYVDCQT 415

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ++ +++ +R  P+ RR ++ AWNV  + KMALPPCHCL QFYV N +LSCQ
Sbjct: 416 DYTGQGVDQLADVIKLIRERPWDRRIMIVAWNVKDLRKMALPPCHCLVQFYVANDELSCQ 475

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E    Q+ R
Sbjct: 476 LYQRSGDMGLGVPFNIASYALLTCMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKR 535

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            PR  P++ I   + ++  F++EDF L  Y+P+  I  K++
Sbjct: 536 VPRPFPKLEIIREVKNIDDFKFEDFKLIDYKPYPKIPMKMA 576


>gi|306921962|dbj|BAJ17638.1| dihydrofolate reductase [Neospora caninum]
          Length = 612

 Score =  345 bits (886), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 135/285 (47%), Positives = 178/285 (62%), Gaps = 23/285 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL+  +I  G+   DRTGVG  S FG  MRF L K FPLLTTK+V WK V+ ELLWF
Sbjct: 328 QYLDLIADIINNGATMDDRTGVGVISKFGCTMRFSLDKAFPLLTTKRVFWKGVLEELLWF 387

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           +RGD+N ++L   GV IWD+   ++            G++GP YG QWR +         
Sbjct: 388 IRGDTNANHLSEKGVKIWDKNVTREFLDSRNLSHREVGDIGPGYGFQWRHFGATYKDMHT 447

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ+  ++  LR +P  RR +++AWN A +D+MALPPCH L QFYV+N + LSC
Sbjct: 448 DYTGQGVDQLKKVINMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVENDRDLSC 507

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS DV LG+PFNIASYSLLT+M+A V   +  EFIH +G+ H+Y+NH E    QL 
Sbjct: 508 VMYQRSCDVGLGVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYSNHVEALKEQLR 567

Query: 222 RSPRTLPQMII--NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P + I     I ++  F  EDF +  Y PH  I  +++V
Sbjct: 568 REPRPFPIVNILNKERIQEIDDFTAEDFEVVGYVPHGRIQMEMAV 612


>gi|312795490|ref|YP_004028412.1| Thymidylate synthase [Burkholderia rhizoxinica HKI 454]
 gi|312167265|emb|CBW74268.1| Thymidylate synthase (EC 2.1.1.45) [Burkholderia rhizoxinica HKI
           454]
          Length = 278

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 150/274 (54%), Positives = 195/274 (71%), Gaps = 13/274 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL +L+ +++ G+ + DRTG GTRS FG   R DLS GFPLLTTKK+H +S++HELLWFL
Sbjct: 5   YLSILKDLLERGTLKSDRTGTGTRSLFGVSYRHDLSTGFPLLTTKKLHVRSILHELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
           RGD+N+ YLH +GV+IWDEWA  DGELGP+YG QWRSW + DG   DQ+ +++ SLR  P
Sbjct: 65  RGDTNIRYLHENGVTIWDEWATPDGELGPVYGAQWRSWRNPDGTRTDQVQALLDSLRTKP 124

Query: 124 YSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
            SRRHI++AWNV+ +               M+LPPCH L+QFY+  GKLSC L QRSGD 
Sbjct: 125 DSRRHILNAWNVSFLPDESKSPEQNALEGRMSLPPCHILYQFYIAEGKLSCMLTQRSGDW 184

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
           FLGIP+N AS + LT M+A  +G Q GE +H++GD HLY NH EQA LQL+R+PR LP++
Sbjct: 185 FLGIPYNCASVAFLTHMIAQQLGLQPGEIVHSIGDAHLYLNHVEQARLQLTRTPRPLPRL 244

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           II      L  +R+EDF +  Y+PH  I A ++V
Sbjct: 245 IIKREPDTLFDYRFEDFEIAGYDPHPHIAAPIAV 278


>gi|238852637|ref|ZP_04643047.1| thymidylate synthase [Lactobacillus gasseri 202-4]
 gi|238834783|gb|EEQ27010.1| thymidylate synthase [Lactobacillus gasseri 202-4]
          Length = 318

 Score =  345 bits (885), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V +  +  ELLW
Sbjct: 6   QPYLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVS
Sbjct: 126 KFDERILADQDFAVKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHTLGD H+Y NHF+Q    L+R P   P++ +NP+   +  F   D  L  
Sbjct: 246 TGLKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YKHHGTIKAPVAV 318


>gi|116629487|ref|YP_814659.1| thymidylate synthase [Lactobacillus gasseri ATCC 33323]
 gi|311110868|ref|ZP_07712265.1| thymidylate synthase [Lactobacillus gasseri MV-22]
 gi|122273575|sp|Q044A1|TYSY_LACGA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116095069|gb|ABJ60221.1| thymidylate synthase [Lactobacillus gasseri ATCC 33323]
 gi|311066022|gb|EFQ46362.1| thymidylate synthase [Lactobacillus gasseri MV-22]
          Length = 318

 Score =  345 bits (885), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V +  +  ELLW
Sbjct: 6   QPYLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVS
Sbjct: 126 KFDERILADRDFAVKFGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHTLGD H+Y NHF+Q    L+R P   P++ +NP+   +  F   D  L  
Sbjct: 246 TGLKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YKHHGTIKAPVAV 318


>gi|156552231|ref|XP_001606421.1| PREDICTED: similar to ENSANGP00000013700 [Nasonia vitripennis]
          Length = 313

 Score =  345 bits (885), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 128/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L+  +I  G+ + DRTGVGT   FG QMRF L  G FPLLTTK V W++VV ELL
Sbjct: 30  YQYLKLIERIIAKGAVKTDRTGVGTHFIFGTQMRFSLRDGIFPLLTTKNVLWRAVVEELL 89

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +N   L   GV IW+  +             ++G+LGP+YG QWR +       
Sbjct: 90  WFIKGSTNAKELADKGVKIWNANSSREFLDSCGFTDREEGDLGPVYGFQWRHFGAKYVNM 149

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+  ++  ++  P  RR I+ AWN   I  MALPPCH L QF V +G+LS
Sbjct: 150 HTDYTGQGVDQLQDVINKIKNKPDDRRIIMCAWNPVDIPIMALPPCHALVQFCVADGELS 209

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASYSLLT M+A +   + G+F+HT+GD H+Y NH      Q+
Sbjct: 210 CQLYQRSADMGLGVPFNIASYSLLTCMIAHITNLKPGDFVHTMGDCHVYRNHVPALKEQI 269

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +R P+  P + I   + ++  F+  DF L +Y+PHA I   ++V
Sbjct: 270 ARKPKPFPTLKITRKVENIDDFKSTDFELNNYKPHAKIYMPMAV 313


>gi|311112042|ref|YP_003983264.1| thymidylate synthase [Rothia dentocariosa ATCC 17931]
 gi|310943536|gb|ADP39830.1| thymidylate synthase [Rothia dentocariosa ATCC 17931]
          Length = 302

 Score =  345 bits (885), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 151/285 (52%), Positives = 190/285 (66%), Gaps = 24/285 (8%)

Query: 4   YLDLLRHVIKFGSD-------RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           Y DLLR ++    D       R DRTG GT   FG QMRFDL   FPL+TTK+VH+KSV 
Sbjct: 18  YEDLLREILDENRDAIAADAQRADRTGTGTFGVFGRQMRFDLRDSFPLITTKRVHFKSVA 77

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            ELLWFLRG SN+ +L   GV+IWDEWAD++G+LGP+YGVQWRSWP  DG  IDQI+ ++
Sbjct: 78  VELLWFLRGSSNIRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVI 137

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVF 171
           +SL+ +P SRRHIVSAWN A +D+MALPPCH +FQFYV        +LSCQLYQRS D+F
Sbjct: 138 ESLKTNPSSRRHIVSAWNPAEVDEMALPPCHAMFQFYVHERPDGVKELSCQLYQRSADMF 197

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SRSPR---- 225
           LG+PFNIASY+LLT ++A  +G + GEFI T GD H+Y+NH EQ   QL     P     
Sbjct: 198 LGVPFNIASYALLTYLIAHEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGNDPEGNPY 257

Query: 226 ------TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                   P+++I      +  + YEDF L  Y+ H  I A ++V
Sbjct: 258 PPREPYPYPKLVIKTKKPSVFDYEYEDFELVDYKHHPGISAPIAV 302


>gi|225458199|ref|XP_002281129.1| PREDICTED: similar to Bifunctional dihydrofolate
           reductase-thymidylate synthase [Vitis vinifera]
          Length = 580

 Score =  345 bits (885), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 129/281 (45%), Positives = 169/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL  L+ +I  G+ + D+TG GT S FG QMRF+L   FPLLTTK+V W+ VV ELLWF+
Sbjct: 300 YLRQLKEIISSGAHKADKTGTGTVSKFGCQMRFNLRLSFPLLTTKRVFWRGVVEELLWFI 359

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G +N   L +  + IWD  A             ++G+LGPIYG QWR +         D
Sbjct: 360 SGSTNAKVLQKKDIHIWDGNASREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTNMHAD 419

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++  P  RR I+S+WN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 420 YMGKGFDQLLDVIDKIKNKPDDRRIILSSWNPSDLKLMALPPCHMFAQFYVANGELSCQM 479

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT M+A V G   G+FI  +GD H+Y  H    + QL + 
Sbjct: 480 YQRSADMGLGVPFNIASYALLTCMIAHVCGILPGDFILIIGDAHIYKTHIRPLEEQLQKL 539

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   D+ SF   DF L  Y PH  I  K+SV
Sbjct: 540 PKPFPILKINPQKKDIESFVAADFELIGYNPHQKIEMKMSV 580


>gi|237835909|ref|XP_002367252.1| bifunctional dihydrofolate reductase / thymidylate synthase
           [Toxoplasma gondii ME49]
 gi|729370|sp|Q07422|DRTS_TOXGO RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|295357|gb|AAB00163.1| dihydrofolate reductase-thymidylate synthase [Toxoplasma gondii]
 gi|211964916|gb|EEB00112.1| bifunctional dihydrofolate reductase / thymidylate synthase
           [Toxoplasma gondii ME49]
 gi|221484873|gb|EEE23163.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Toxoplasma gondii GT1]
 gi|221506073|gb|EEE31708.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Toxoplasma gondii VEG]
          Length = 610

 Score =  345 bits (885), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 134/285 (47%), Positives = 178/285 (62%), Gaps = 23/285 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL+  +I  G    DRTGVG  S FG  MR+ L + FPLLTTK+V WK V+ ELLWF
Sbjct: 326 QYLDLIADIINNGRTMDDRTGVGVISKFGCTMRYSLDQAFPLLTTKRVFWKGVLEELLWF 385

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           +RGD+N ++L   GV IWD+   ++            G++GP YG QWR +         
Sbjct: 386 IRGDTNANHLSEKGVKIWDKNVTREFLDSRNLPHREVGDIGPGYGFQWRHFGAAYKDMHT 445

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ+ +++Q LR +P  RR +++AWN A +D+MALPPCH L QFYV++ K LSC
Sbjct: 446 DYTGQGVDQLKNVIQMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVNDQKELSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS DV LG+PFNIASYSLLT+M+A V   +  EFIH +G+ H+Y NH E    QL 
Sbjct: 506 IMYQRSCDVGLGVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYTNHVEALKEQLR 565

Query: 222 RSPRTLPQMII--NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P + I     I ++  F  EDF +  Y PH  I  +++V
Sbjct: 566 REPRPFPIVNILNKERIKEIDDFTAEDFEVVGYVPHGRIQMEMAV 610


>gi|119503469|ref|ZP_01625552.1| Thymidylate synthase [marine gamma proteobacterium HTCC2080]
 gi|119460531|gb|EAW41623.1| Thymidylate synthase [marine gamma proteobacterium HTCC2080]
          Length = 277

 Score =  345 bits (885), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 143/277 (51%), Positives = 182/277 (65%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLLR +   G+ R DRTG GTRS FG Q+RFDL  GFPLLTTKKVH+KSV +EL+
Sbjct: 1   MRAYLDLLRDIRDHGAVRTDRTGTGTRSLFGRQLRFDLKDGFPLLTTKKVHFKSVANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N ++L  HGVSIWDEWA + G+LGP+YG QWR WP  DG  IDQ++ ++  L+
Sbjct: 61  WFLKGDTNTAWLKEHGVSIWDEWATEQGDLGPLYGAQWRRWPTQDGREIDQLAYVLDCLK 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR +   WNV  +               MALPPCH L+QFYV +GKLS  L+ RS
Sbjct: 121 NRPDSRRILFHGWNVEYLPDETLSPQENVRAGRMALPPCHLLYQFYVVDGKLSTLLFIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D FLG+PFNIAS +LLT MLA   G    E + ++GD H+Y+NH +Q ++QL+RSP   
Sbjct: 181 SDTFLGLPFNIASVALLTHMLAQQSGLGVSEVVVSIGDAHIYSNHVDQVEVQLARSPAPP 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + +      L  + YEDF L  Y P A I A V++
Sbjct: 241 PTLKLLRQPDSLFDYCYEDFALEGYSPQAHISAPVAI 277


>gi|254281872|ref|ZP_04956840.1| thymidylate synthase [gamma proteobacterium NOR51-B]
 gi|219678075|gb|EED34424.1| thymidylate synthase [gamma proteobacterium NOR51-B]
          Length = 277

 Score =  344 bits (884), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 147/277 (53%), Positives = 183/277 (66%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+LLR +   G DR DRTG GTRS FG Q+RFDL +GFPLLTTKK+H+KSVV+EL+
Sbjct: 1   MRAYLELLRDIRDHGVDRGDRTGTGTRSVFGRQLRFDLREGFPLLTTKKIHFKSVVNELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N  +L  +GVSIWDEWA +DG+LGP+YG QW +WP  DG  I+QI  ++  LR
Sbjct: 61  WFLSGDTNTRWLKENGVSIWDEWATEDGDLGPLYGAQWHAWPTRDGGSINQIDYVLDCLR 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
             P SRR +  AWNV  +               MALPPCH L+QFYV NG LS QLY RS
Sbjct: 121 NRPESRRILFHAWNVEYLPDESMTPQDNVAAGRMALPPCHLLYQFYVANGALSAQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+PFNIAS +LLT MLA        E I +LGD H+Y+NH  Q + QL+R P + 
Sbjct: 181 SDVFLGLPFNIASLALLTHMLAQQADLSVAEVIVSLGDAHIYSNHQRQVETQLAREPGSA 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + I      +  +R+EDF+L  Y+P   I A V+V
Sbjct: 241 PTLAIGRRPDTIYDYRFEDFSLHDYDPQPPIPAPVAV 277


>gi|194467928|ref|ZP_03073914.1| Thymidylate synthase [Lactobacillus reuteri 100-23]
 gi|194452781|gb|EDX41679.1| Thymidylate synthase [Lactobacillus reuteri 100-23]
          Length = 320

 Score =  344 bits (884), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 188/313 (60%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL+R+V+  G  + DRTG GT+S FGYQMRFDLSKGFP+LTTKKV +  +  ELLW
Sbjct: 8   EQYLDLIRYVLANGHQKGDRTGTGTKSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIRFLLQHKNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLKDPEFKQVYLQEKK 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W    G+ IDQI++++Q ++  P SRR IVS
Sbjct: 128 SFCQRILDDDDFAQKYGDLGLVYGSQWRKWKTSQGDTIDQIANVIQQIKTTPDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NH +Q   QL+R+P   P++I+      +  +   D  L  
Sbjct: 248 CGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEG 307

Query: 252 YEPHAAILAKVSV 264
           Y   +AI A V+V
Sbjct: 308 YTHESAIKAPVAV 320


>gi|227529200|ref|ZP_03959249.1| thymidylate synthase [Lactobacillus vaginalis ATCC 49540]
 gi|227350875|gb|EEJ41166.1| thymidylate synthase [Lactobacillus vaginalis ATCC 49540]
          Length = 320

 Score =  344 bits (884), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL L ++V+  G  + DRTG GT+S FGYQMRF+L +GFPLLTTKKV +  +  ELLW
Sbjct: 8   QQYLSLAQYVLDHGHTKSDRTGTGTKSVFGYQMRFNLEEGFPLLTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIQFLLKHKNHIWDEWAFKKWVESDEYHGPDMTDFGHRWLKDPEFKKAYLKEKR 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W   +G  IDQI++++  ++  P SRR IVS
Sbjct: 128 DFCERIVNDDEFAKKYGDLGLVYGSQWRHWKTSNGQTIDQIANVIDQIKTTPDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDISSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q G+F+HTLGD H+Y NH  Q   QLSR+P   P++I+      +  +   D  L  
Sbjct: 248 CGLQVGDFVHTLGDAHIYLNHLSQIKEQLSRTPHKAPKLILPDEPKPIDEYEMSDIKLEG 307

Query: 252 YEPHAAILAKVSV 264
           Y    AI A V+V
Sbjct: 308 YTHEPAIKAPVAV 320


>gi|240848723|ref|NP_001155666.1| thymidylate synthase-like [Acyrthosiphon pisum]
 gi|239790855|dbj|BAH71962.1| ACYPI006453 [Acyrthosiphon pisum]
          Length = 299

 Score =  344 bits (884), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 131/284 (46%), Positives = 180/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLD ++ +++ G  + DRT VGT S FG QMR++L  G FPLLTTK+V W+ VV ELL
Sbjct: 16  QQYLDHIKKILEKGHKKMDRTRVGTLSLFGIQMRYNLMDGVFPLLTTKRVFWRGVVEELL 75

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +N   L    V +WD  +             ++G+LGP+YG QWR +       
Sbjct: 76  WFIKGSTNSKELSEKDVKVWDANSTRSYLDSIGLTDREEGDLGPVYGFQWRHYGAEYVDV 135

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+ +++ +++ +P  RR ++ AWN   + KMALPPCHCL QF+V +G LS
Sbjct: 136 HTDYSGKGIDQLQNVINTIKTNPDDRRMLMIAWNPCDVPKMALPPCHCLVQFFVADGYLS 195

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFNIASYSLLT M+A V G + GEFIHTLGD H+Y NH +   +QL
Sbjct: 196 CQMYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFIHTLGDSHIYLNHVDALKIQL 255

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P+  P + IN  +  +  F + DFTL  Y P+  I   ++V
Sbjct: 256 QRKPKQFPTLTINREVKSIDDFNFSDFTLSGYVPYPKISMDMAV 299


>gi|301066434|ref|YP_003788457.1| thymidylate synthase [Lactobacillus casei str. Zhang]
 gi|300438841|gb|ADK18607.1| Thymidylate synthase [Lactobacillus casei str. Zhang]
          Length = 316

 Score =  344 bits (884), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 189/313 (60%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLS+GFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSEGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLRGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q G+FIHT GD HLY NH +Q   QL+R+PR  P +++NP+  D+  F  +D  L +
Sbjct: 244 CGLQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|136612|sp|P00469|TYSY_LACCA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157831773|pdb|1LCA|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And Cb3717
 gi|157831774|pdb|1LCB|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dtmp And H2folate
 gi|157831775|pdb|1LCE|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And Ch2thf
 gi|157832141|pdb|1NJE|A Chain A, Thymidylate Synthase With 2'-Deoxycytidine
           5'-Monophosphate (Dcmp)
 gi|157833951|pdb|1THY|A Chain A, Refined Structures Of Substrate-Bound And Phosphate-Bound
           Thymidylate Synthase From Lactobacillus Casei
 gi|157834017|pdb|1TSL|A Chain A, L. Casei Thymidylate Synthase With Species Specific
           Inhibitor
 gi|157834018|pdb|1TSM|A Chain A, L. Casei Thymidylate Synthase With Species Specific
           Inhibitor
 gi|157836379|pdb|2TDM|A Chain A, Structure Of Thymidylate Synthase
 gi|157837001|pdb|4TMS|A Chain A, Plastic Adaptation Toward Mutations In Proteins:
           Structural Comparison Of Thymidylate Synthases
 gi|218681751|pdb|3BNZ|A Chain A, Crystal Structure Of Thymidylate Synthase Ternary Complex
           With Dump And 8a Inhibitor
 gi|221046605|pdb|3BYX|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And The Phtalimidic Derivative C00 In Multiple
           Binding Modes
 gi|221046606|pdb|3BZ0|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And The Phtalimidic Derivative C00
 gi|221046647|pdb|3C06|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And The Phtalimidic Derivative 14c In Multiple
           Binding Modes-Mode 1
 gi|221046648|pdb|3C0A|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And The Phtalimidic Derivative 14c In Multiple
           Binding Modes-Mode 2
 gi|302566074|pdb|3IJZ|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex
           With Dump And Pthalimidic Derivative 15c
 gi|302566075|pdb|3IK0|A Chain A, Lactobacillus Casei Thymidylate Synthase In Ternary
           Complex With Dump And The Phtalimidic Derivative 7c1
 gi|302566076|pdb|3IK1|A Chain A, Lactobacillus Casei Thymidylate Synthase In Ternary
           Complex With Dump And The Phtalimidic Derivative 20c
 gi|208731|gb|AAA72795.1| thymidylate synthase (EC 2.1.1.45) [synthetic construct]
          Length = 316

 Score =  344 bits (883), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|239631533|ref|ZP_04674564.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239525998|gb|EEQ64999.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 316

 Score =  344 bits (883), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 148/313 (47%), Positives = 190/313 (60%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKVH+  +  ELLW
Sbjct: 4   QPYLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVHFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLRGDTNIRFLLQHKNHIWDEWAFEKWVTSPDYHGPDMTDFGHRSQKDPEFAASYREQMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q G+FIHT GD HLY NH +Q   QL+R+PR  P +++NP+  D+  F  +D  L +
Sbjct: 244 CGLQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|241896672|ref|ZP_04783968.1| thymidylate synthase [Weissella paramesenteroides ATCC 33313]
 gi|241870153|gb|EER73904.1| thymidylate synthase [Weissella paramesenteroides ATCC 33313]
          Length = 318

 Score =  344 bits (883), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 142/311 (45%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL + ++  G+ + DRTG GTRS FG Q+RFD+S+GFPLLTTK+V +  +  ELLWFL
Sbjct: 8   YLDLAQDILDNGAVKGDRTGTGTRSVFGRQLRFDMSEGFPLLTTKRVPFGLIKSELLWFL 67

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           RGD+N+ +L  H   IWDEWA K+                                    
Sbjct: 68  RGDTNIKFLLEHKNHIWDEWAFKNWIESAEYDGPDMTDFGRRSLVDDAFKAQYDEQHAIF 127

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         GELG +YG QWR W    G  IDQI  ++  ++ +P SRR IV+AW
Sbjct: 128 VDRILNDDEFAQKYGELGDVYGAQWRHWRRVQGGFIDQIKDVIDQIKTNPNSRRLIVTAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +   ALPPCH LFQFYV +GKLS QLYQRS DVFLG+PFNIASYSLL  M+A+  G
Sbjct: 188 NPEDVPTQALPPCHTLFQFYVADGKLSLQLYQRSADVFLGVPFNIASYSLLLHMVAAQTG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + G+F+HT GD H+Y+NH EQ   QL R  R LP + +NP++ D+  +   D  + +Y 
Sbjct: 248 LEPGKFVHTFGDTHIYSNHIEQVTEQLQREMRELPTITLNPDVKDIAEYTMADIKINNYN 307

Query: 254 PHAAILAKVSV 264
           PHA+I A V+V
Sbjct: 308 PHASIKAPVAV 318


>gi|116494873|ref|YP_806607.1| thymidylate synthase [Lactobacillus casei ATCC 334]
 gi|122263709|sp|Q039F7|TYSY_LACC3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116105023|gb|ABJ70165.1| thymidylate synthase [Lactobacillus casei ATCC 334]
          Length = 316

 Score =  344 bits (883), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 147/313 (46%), Positives = 189/313 (60%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLRGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q G+FIHT GD HLY NH +Q   QL+R+PR  P +++NP+  D+  F  +D  L +
Sbjct: 244 CGLQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|282850793|ref|ZP_06260167.1| thymidylate synthase [Lactobacillus gasseri 224-1]
 gi|282557745|gb|EFB63333.1| thymidylate synthase [Lactobacillus gasseri 224-1]
          Length = 318

 Score =  344 bits (883), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 181/313 (57%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRF+LS+GFP+LTTK+V +  +  ELLW
Sbjct: 6   QPYLDLLNKIMIEGHDKEDRTGTGTRSIFGAQMRFNLSEGFPILTTKRVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVESDEYHGPDMTNFGLRSQEDAKFKQVYQEEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +Y  QWR W   +G  IDQI +++  ++  PYSRR IVS
Sbjct: 126 KFDERILADRDFAVKFGNLGDVYAAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDVPNSALPPCHVLFQFYVNDGRLSVQLYQRSGDMFLGVPFNIASYSLLVNLIAQE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHTLGD H+Y NHF+Q    L+R P   P++ +NP+   +  F   D  L  
Sbjct: 246 TGLKPGEFIHTLGDAHIYRNHFDQVKELLTRKPYDSPKLWLNPDKKKIEDFEMSDIKLVD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YKHHGTIKAPVAV 318


>gi|219682346|ref|YP_002468730.1| thymidylate synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|254790233|sp|B8D7X0|TYSY_BUCAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219622079|gb|ACL30235.1| thymidylate synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|311086743|gb|ADP66824.1| thymidylate synthase [Buchnera aphidicola str. TLW03 (Acyrthosiphon
           pisum)]
 gi|311087836|gb|ADP67915.1| thymidylate synthase [Buchnera aphidicola str. JF98 (Acyrthosiphon
           pisum)]
          Length = 264

 Score =  344 bits (883), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 145/264 (54%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H  S+++ELL
Sbjct: 1   MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W   +G+ IDQI +++  L+
Sbjct: 61  WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  IDKM LPPCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YS+L  M+A     + G+F+ T GDVHLYNNH E A  Q+ R PRTLP++ I      L 
Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y P+ AI  ++S+
Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264


>gi|327183411|gb|AEA31858.1| thymidylate synthase [Lactobacillus amylovorus GRL 1118]
          Length = 318

 Score =  344 bits (883), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 6   QPYLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   DG  IDQI ++++ ++  P SRR IV+
Sbjct: 126 KFDQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL  M+A  
Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q    LSR P   PQ+ +NP    +  F+ +D  +  
Sbjct: 246 TGLEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YKHHGTIKAPVAV 318


>gi|219681791|ref|YP_002468177.1| thymidylate synthase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471493|ref|ZP_05635492.1| thymidylate synthase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
 gi|254790232|sp|B8D9L8|TYSY_BUCA5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219624634|gb|ACL30789.1| thymidylate synthase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 264

 Score =  344 bits (883), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 146/264 (55%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H  S+++ELL
Sbjct: 1   MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W   +G+ IDQI +++  L+
Sbjct: 61  WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  IDKM LPPCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YS+L  M+A     + G+F+ T GDVHLYNNH E A  Q+ R PRTLP++ I      L 
Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y P+ AI  K+S+
Sbjct: 241 QYCFEDFKIIGYHPYPAIKGKISI 264


>gi|191638380|ref|YP_001987546.1| thymidylate synthase [Lactobacillus casei BL23]
 gi|190712682|emb|CAQ66688.1| Thymidylate synthase (TS) (TSase) [Lactobacillus casei BL23]
 gi|327382408|gb|AEA53884.1| Thymidylate synthase [Lactobacillus casei LC2W]
 gi|327385609|gb|AEA57083.1| Thymidylate synthase [Lactobacillus casei BD-II]
          Length = 316

 Score =  344 bits (882), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 147/313 (46%), Positives = 189/313 (60%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVRFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLRGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q G+FIHT GD HLY NH +Q   QL+R+PR  P +++NP+  D+  F  +D  L +
Sbjct: 244 CGLQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|195446571|ref|XP_002070828.1| GK18710 [Drosophila willistoni]
 gi|194166913|gb|EDW81814.1| GK18710 [Drosophila willistoni]
          Length = 354

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 128/281 (45%), Positives = 179/281 (63%), Gaps = 22/281 (7%)

Query: 6   DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRG 65
           DLLR +I+ G  R DRT VGT S FG QMRFD+ + FPLLTTK+V +++V  ELLWF++G
Sbjct: 74  DLLRSIIERGETRIDRTRVGTLSIFGSQMRFDMRESFPLLTTKRVFFRAVAEELLWFIKG 133

Query: 66  DSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------DYD 105
            ++   L    V IWD  + ++            G+LGP+YG QWR +         DY 
Sbjct: 134 KTDAKILQDKNVHIWDGNSTREFLDNLGFTDRAVGDLGPVYGFQWRHFGAEYRTCQDDYT 193

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKLSCQL 163
           G  +DQ+  ++++++ +P  RR I+SAWN   + KMALPPCHCL QFYV     +LSCQL
Sbjct: 194 GQGVDQLRQVIETIKTNPSDRRIIMSAWNPLDLPKMALPPCHCLAQFYVSQSRNELSCQL 253

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y +H E    QL R+
Sbjct: 254 YQRSADMGLGVPFNIASYALLTYMIAHVTGLKPGDFVHTMGDTHVYLSHVEPIKEQLKRT 313

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR  P++     + D+  F YED  + +Y P+  I  +++V
Sbjct: 314 PRPFPKLAFKRQVTDIEDFTYEDIEIVNYNPYPKIQMEMAV 354


>gi|195398227|ref|XP_002057724.1| GJ18288 [Drosophila virilis]
 gi|194141378|gb|EDW57797.1| GJ18288 [Drosophila virilis]
          Length = 348

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 135/285 (47%), Positives = 178/285 (62%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL  +  +IK G  R DRT VGT S FG QMRFDL K FPLLTTK+V ++ V  ELLW
Sbjct: 64  KQYLLFIERIIKNGDKRVDRTRVGTLSIFGAQMRFDLRKSFPLLTTKRVFFRGVAEELLW 123

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G ++   L    V IWD  + ++            G+LGP+YG QWR +        
Sbjct: 124 FIAGKTDAKILQAKKVHIWDANSTREFLDNCGHTDRAVGDLGPVYGFQWRHFGAEYRTCD 183

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKL 159
            DY G  +DQ+  ++ ++R +P  RR I+SAWN   I KMALPPCHCL QF+V    G+L
Sbjct: 184 DDYTGQGVDQLQQVIHTIRTNPSDRRIIMSAWNPMDIPKMALPPCHCLVQFFVSQSKGEL 243

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           SCQLYQRS D+ LG+PFNIASY+LLT ++A V G + GEFIHT+GD H+Y NH E    Q
Sbjct: 244 SCQLYQRSADMGLGVPFNIASYALLTYLIAHVTGLKPGEFIHTIGDAHVYLNHIEPLQQQ 303

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + RSP+  P++ I   + ++  F YEDF +  Y P  AI  +++V
Sbjct: 304 IKRSPKPFPKLNIKRQVTNIEDFCYEDFEIVGYNPDKAIPMEMAV 348


>gi|311087331|gb|ADP67411.1| thymidylate synthase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
          Length = 264

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 145/264 (54%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H  S+++ELL
Sbjct: 1   MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL+ + +SIW+ WA++ G++GPIYG QWR+W   +G+ IDQI +++  L+
Sbjct: 61  WFLKGDTNIAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTLEGHEIDQIKNVLIQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  IDKM LPPCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YS+L  M+A     + G+F+ T GDVHLYNNH E A  Q+ R PRTLP++ I      L 
Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y P+ AI  ++S+
Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264


>gi|15617039|ref|NP_240252.1| thymidylate synthase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11387178|sp|P57515|TYSY_BUCAI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|25285999|pir||B84981 thymidylate synthase (EC 2.1.1.45) [imported] - Buchnera sp.
           (strain APS)
 gi|10039104|dbj|BAB13138.1| thymidylate synthase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 264

 Score =  343 bits (881), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 146/264 (55%), Positives = 195/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H  S+++ELL
Sbjct: 1   MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+SYL+ + +SIW+ WA++ G++GPIYG QWR+W   +G+ IDQI +++  L+
Sbjct: 61  WFLKGDTNISYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  IDKM LPPCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YS+L  M+A     + G+F+ T GDVHLYNNH E A  Q+ R PRTLP++ I      L 
Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y P+ AI  ++S+
Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264


>gi|157832139|pdb|1NJC|A Chain A, Thymidylate Synthase, Mutation, N229d With
           2'-Deoxycytidine 5'-Monophosphate (Dcmp)
 gi|157832140|pdb|1NJD|A Chain A, Thymidylate Synthase, Mutation, N229d With 2'-Deoxyuridine
           5'-Monophosphate (Dump)
          Length = 316

 Score =  343 bits (881), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF+IASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFDIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|259046573|ref|ZP_05736974.1| thymidylate synthase [Granulicatella adiacens ATCC 49175]
 gi|259036738|gb|EEW37993.1| thymidylate synthase [Granulicatella adiacens ATCC 49175]
          Length = 315

 Score =  343 bits (881), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 141/313 (45%), Positives = 178/313 (56%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY +LL  +++ G+ + DRTG GT+S FGYQMRFDL KGFPLLTTK+V +  +  ELLW
Sbjct: 3   KQYKELLTKILEEGTTKTDRTGTGTKSIFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLW 62

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ YL  H   IWDEWA                                     
Sbjct: 63  FLHGDTNIKYLLEHNNHIWDEWAFERYVSSPKYTGPDMTDFGRRCLQDEAFNEVYQEVKK 122

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         + GELG IYG QWR W    G  IDQI  ++  L+  P SRR IVS
Sbjct: 123 DFCEKILSDDAFAAEFGELGNIYGSQWRHWKTSKGETIDQIEDLLNLLKNSPDSRRMIVS 182

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A+ 
Sbjct: 183 AWNPEDVPSMALPPCHTMFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTHLIANE 242

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
           +G + GEF+HTLGD H+Y NH EQ   QL+R    LP +++      +      D  +  
Sbjct: 243 VGLEVGEFVHTLGDAHIYLNHMEQVKTQLAREEMALPTLVLKHPEKSMFDIDVTDVVVEG 302

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A ++V
Sbjct: 303 YQSHPTIKAPIAV 315


>gi|315038135|ref|YP_004031703.1| thymidylate synthase [Lactobacillus amylovorus GRL 1112]
 gi|312276268|gb|ADQ58908.1| thymidylate synthase [Lactobacillus amylovorus GRL 1112]
          Length = 318

 Score =  343 bits (881), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 6   QPYLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFSLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   DG  IDQI ++++ ++  P SRR IV+
Sbjct: 126 KFDQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL  M+A  
Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q    LSR P   PQ+ +NP    +  F+ +D  +  
Sbjct: 246 TGLEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YKHHGTIKAPVAV 318


>gi|47458869|ref|YP_015731.1| thymidylate synthase [Mycoplasma mobile 163K]
 gi|62901312|sp|Q6KIQ6|TYSY_MYCMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|47458197|gb|AAT27520.1| thymidylate synthase [Mycoplasma mobile 163K]
          Length = 288

 Score =  343 bits (881), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 148/293 (50%), Positives = 193/293 (65%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL+ +++ G  + DRT  GT S FG Q R+DLSKGFPL+TTKKVH KS++ ELL
Sbjct: 1   MEQYLSLLKEILEKGQKKEDRTNTGTISYFGTQRRYDLSKGFPLVTTKKVHLKSIIFELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91
           WF++GD+N+ YL  +GV+IW+EW                               K GELG
Sbjct: 61  WFIKGDTNIKYLVDNGVNIWNEWPYETFKKSKDFNGESLADFVLKIKSDTLFAKKYGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++     N  DQ+   +++++ +P SRR IVSAW    I KMALPPCH  FQ
Sbjct: 121 PVYGKQWRNF-----NGTDQLFDAIETIKKNPDSRRIIVSAWAANEISKMALPPCHAFFQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV+N KLS QLYQRSGD FLG+PFNIASYS+L  M+A +  ++ GEFIHT+GD H+Y N
Sbjct: 176 FYVNNNKLSLQLYQRSGDTFLGVPFNIASYSILLAMVAQITNYEVGEFIHTIGDTHIYLN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ + QLSR P  LP++++N  I ++  F+YED  +  YE H AI AKV+V
Sbjct: 236 HLEQVEEQLSRKPLKLPKLVLNKKIKNIDDFKYEDIEIIDYESHPAIKAKVAV 288


>gi|261329761|emb|CBH12743.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei
           gambiense DAL972]
          Length = 527

 Score =  343 bits (881), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 131/284 (46%), Positives = 174/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  +I  G  + DRTGVGTRS FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102
           WFLRG++N   L   G+ IWD    +            + +LGP+YG QWR +       
Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             D +G  +DQI++IV+SL  +P  RR I +AWN A + +MALPPCH + QFYV NG+LS
Sbjct: 364 KVDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT ++A   G + GE +HTLGD H+Y+NH E    QL
Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++   +   L  F+  D  +  Y P+  I  +++V
Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527


>gi|72391754|ref|XP_846171.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei
           TREU927]
 gi|62358404|gb|AAX78868.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei]
 gi|70802707|gb|AAZ12612.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
          Length = 527

 Score =  343 bits (881), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 131/284 (46%), Positives = 174/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  +I  G  + DRTGVGTRS FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102
           WFLRG++N   L   G+ IWD    +            + +LGP+YG QWR +       
Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             D +G  +DQI++IV+SL  +P  RR I +AWN A + +MALPPCH + QFYV NG+LS
Sbjct: 364 KEDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT ++A   G + GE +HTLGD H+Y+NH E    QL
Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++   +   L  F+  D  +  Y P+  I  +++V
Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527


>gi|157831561|pdb|1JMI|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
 gi|157834041|pdb|1TVW|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
          Length = 316

 Score =  343 bits (881), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF+IASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFSIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|2833337|sp|Q27783|DRTS_TRYBB RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|799175|gb|AAA91362.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma brucei]
          Length = 527

 Score =  343 bits (880), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 131/284 (46%), Positives = 174/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  +I  G  + DRTGVGTRS FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 244 EQYLNLVGRIIDEGCTKCDRTGVGTRSLFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 303

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102
           WFLRG++N   L   G+ IWD    +            + +LGP+YG QWR +       
Sbjct: 304 WFLRGETNAKLLSDKGIHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGADYISC 363

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             D +G  +DQI++IV+SL  +P  RR I +AWN A + +MALPPCH + QFYV NG+LS
Sbjct: 364 KVDSEGKGVDQIANIVKSLIENPDDRRMICTAWNPAALPRMALPPCHMMAQFYVSNGELS 423

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT ++A   G + GE +HTLGD H+Y+NH E    QL
Sbjct: 424 CMLYQRSCDMGLGVPFNIASYALLTFLMAKASGLRPGELVHTLGDAHVYSNHVEPCRKQL 483

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++   +   L  F+  D  +  Y P+  I  +++V
Sbjct: 484 KRVPRPFPFIVFKQDKEFLEDFQESDIEVIDYSPYPVISMEMAV 527


>gi|312869138|ref|ZP_07729312.1| thymidylate synthase [Lactobacillus oris PB013-T2-3]
 gi|311095384|gb|EFQ53654.1| thymidylate synthase [Lactobacillus oris PB013-T2-3]
          Length = 320

 Score =  343 bits (880), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 147/313 (46%), Positives = 188/313 (60%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL R+V++ G ++ DRTG GTRS FGYQMRFDL+KGFP+LTTKKV +  +  ELLW
Sbjct: 8   QQYLDLARYVLENGHEKTDRTGTGTRSVFGYQMRFDLAKGFPILTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIRFLLQHHNHIWDEWAFKKWVESDEYQGPDMTDFGHRWLVDEDFKKQYLAEKK 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W   +G  IDQI++++  ++    SRR IVS
Sbjct: 128 AFCQRIIDDADFAKKYGDLGLVYGSQWRHWKTSNGETIDQIANVIHQIKTTSDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q G+F+HTLGD H+Y NH +Q   QLSR+P   P++I+      +  +  ED  L  
Sbjct: 248 CGLQVGDFVHTLGDAHIYLNHLDQIKEQLSRTPHEAPRLILPAEPKLIDQYEMEDIKLEG 307

Query: 252 YEPHAAILAKVSV 264
           Y   AAI A V+V
Sbjct: 308 YTHEAAIKAPVAV 320


>gi|238854701|ref|ZP_04645031.1| thymidylate synthase [Lactobacillus jensenii 269-3]
 gi|260663934|ref|ZP_05864787.1| thymidylate synthase [Lactobacillus jensenii SJ-7A-US]
 gi|282932908|ref|ZP_06338305.1| thymidylate synthase [Lactobacillus jensenii 208-1]
 gi|313472235|ref|ZP_07812727.1| thymidylate synthase [Lactobacillus jensenii 1153]
 gi|238832491|gb|EEQ24798.1| thymidylate synthase [Lactobacillus jensenii 269-3]
 gi|239529621|gb|EEQ68622.1| thymidylate synthase [Lactobacillus jensenii 1153]
 gi|260561820|gb|EEX27789.1| thymidylate synthase [Lactobacillus jensenii SJ-7A-US]
 gi|281302943|gb|EFA95148.1| thymidylate synthase [Lactobacillus jensenii 208-1]
          Length = 318

 Score =  343 bits (880), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+++++ G D+ DRTG GTRS FG QMRFDLS+GFPL+TTKKV +  +  ELLW
Sbjct: 6   QPYLDLLKNIMETGHDKTDRTGTGTRSKFGAQMRFDLSQGFPLVTTKKVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L  H   IWDEWA                                     
Sbjct: 66  FLRGDTNIKFLLEHKNHIWDEWAFKNWVNSPEYQGPDMNDFGLRSQKDADFKKLYDEQMK 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR W    G  IDQI  ++  L+  P SRR IVS
Sbjct: 126 LFTERILSDEAFAEKYGNLGDVYGAQWRHWKKRSGGSIDQIQDVLNQLQTHPDSRRMIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV + KLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDVPTSALPPCHTLFQFYVADNKLSLQLYQRSGDMFLGVPFNIASYSLLLSLVARQ 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            GF+ GEF+HTLGD H+Y NHF+Q + QL+R P   P++ +N    ++  F  ED  +  
Sbjct: 246 TGFEVGEFVHTLGDAHIYKNHFDQVEKQLARDPFDSPKLWLNSAKKNISDFEMEDIKVLD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YKHHGVIKAPVAV 318


>gi|227535130|ref|ZP_03965179.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187175|gb|EEI67242.1| thymidylate synthase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 328

 Score =  343 bits (880), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 189/313 (60%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLS+GFPLLTTKKV +  +  ELLW
Sbjct: 16  QPYLDLAQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSEGFPLLTTKKVPYGLIKSELLW 75

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 76  FLRGDTNIRFLLQHKNHIWDEWAFEKWVASPDYHGPDMTDFGHRSQKDPEFAASYREQMA 135

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 136 KFDERILTDESFAAKYGDLGLVYGSQWRAWHTSRGDTIDQLGDVIEQIKTHPYSRRLIVS 195

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH LFQFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 196 AWNPEDVPTMALPPCHTLFQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 255

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q G+FIHT GD HLY NH +Q   QL+R+PR  P +++NP+  D+  F  +D  L +
Sbjct: 256 CGLQVGDFIHTFGDAHLYVNHLDQIKEQLTRTPRQAPTLVLNPDKHDIFDFDMQDIKLLN 315

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 316 YDPYPAIKAPVAV 328


>gi|325956588|ref|YP_004292000.1| thymidylate synthase [Lactobacillus acidophilus 30SC]
 gi|325333153|gb|ADZ07061.1| thymidylate synthase [Lactobacillus acidophilus 30SC]
          Length = 318

 Score =  343 bits (880), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTG GTRS FG QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 6   QPYLDLLQKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKKVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVTSAEYQGPDMTDFGLRSQSDPEFNKVYQAEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   DG  IDQI ++++ ++  P SRR IV+
Sbjct: 126 KFDQRILDDEDFAKRYGNLGDVYGAQWRHWQKRDGGFIDQIDNVIKQIKETPDSRRMIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL  M+A  
Sbjct: 186 AWNPEDVSTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q    LSR P   PQ+ +NP    +  F+ +D  +  
Sbjct: 246 TGLEVGEFVHTLGDAHIYRNHFDQVKELLSRKPYDSPQLWLNPEKKHIEDFKMKDIKVVD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YKHHGTIKAPVAV 318


>gi|2625048|gb|AAC58691.1| thymidylate synthase homolog [rhesus monkey rhadinovirus H26-95]
          Length = 282

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  L  +IK G  R DRTGVGTRS FG Q R++L   FPLLTTK+V W+ VV ELLWF
Sbjct: 1   QYLAHLDLIIKHGVQREDRTGVGTRSVFGLQARYNLRDEFPLLTTKRVFWRGVVEELLWF 60

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP-------- 102
           +RG ++ + L R GV IWD    +            +G+LGP+YG QWR +         
Sbjct: 61  IRGSTDSTELSRRGVKIWDAHGSRAFLAAQGFGDRREGDLGPVYGFQWRHFGAEYRGADA 120

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y+G  +DQ+  +V  +   P+ RR ++ AWN A + +MALPPCH L QFYV  G+LSCQ
Sbjct: 121 NYEGQGVDQLRYVVDLINRRPHDRRIVMCAWNPADLARMALPPCHVLCQFYVARGELSCQ 180

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRS D+ LG+PFNIASY+LLT ++A V G   G+F+HTLGD H+YNNH +   LQL R
Sbjct: 181 LYQRSADMGLGVPFNIASYALLTYLIAHVTGLTPGDFVHTLGDAHVYNNHVDPLLLQLRR 240

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +PR  P++ I   +  L  F   D +L  Y+PH  I  +++V
Sbjct: 241 TPRPFPRLKILRKVARLEDFTRADLSLEGYDPHPHIEMEMAV 282


>gi|332686569|ref|YP_004456343.1| thymidylate synthase [Melissococcus plutonius ATCC 35311]
 gi|332370578|dbj|BAK21534.1| thymidylate synthase [Melissococcus plutonius ATCC 35311]
          Length = 315

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L R ++  G  + DRTG GT S FGYQMRF+LS GFPLLTTK+V +  +  ELLWFL
Sbjct: 5   YLALGREILTNGEAKEDRTGTGTLSIFGYQMRFNLSTGFPLLTTKRVPFGLIKSELLWFL 64

Query: 64  RGDSNVSYLHRHGVSIWDEWADK------------------------------------- 86
           +GD+N+ +L  +   IWDEWA +                                     
Sbjct: 65  KGDTNIRFLLENNNHIWDEWAFERYTKSPDYIGPDMTNFGQRVLTDSKFSEIYQEQHQLF 124

Query: 87  -------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         GELG IYG QWR W    G  IDQ++ +++ ++  P SRR IVSAW
Sbjct: 125 CNKILTDDEFAQQYGELGNIYGAQWRRWQTKSGKFIDQLTQVIEMIKKTPDSRRLIVSAW 184

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I  MALPPCH LFQFYV + KLSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 185 NPEEIPSMALPPCHTLFQFYVSHNKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAHETG 244

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GDVHLY NH +Q + QL+R P+ LP +++N     +  F   D  + +Y+
Sbjct: 245 LEVGEFVHTFGDVHLYKNHIDQMNEQLTRKPKQLPTLVLNTTKTSIFDFDMADIKVENYQ 304

Query: 254 PHAAILAKVSV 264
           P+ AI A ++V
Sbjct: 305 PYPAIKAPIAV 315


>gi|15384270|gb|AAK96220.1|AF406808_1 thymidylate synthase [Trichinella spiralis]
 gi|13096100|gb|AAF80470.2| thymidylate synthase [Trichinella spiralis]
 gi|316977369|gb|EFV60479.1| thymidylate synthase [Trichinella spiralis]
          Length = 307

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 128/282 (45%), Positives = 178/282 (63%), Gaps = 21/282 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL+ L+ +I  G  + DRTG+GT STFG Q R+ L    FPLLTTK+V W+ VV ELLWF
Sbjct: 26  YLNQLKDIIDHGVRKNDRTGIGTLSTFGTQSRYCLRDDIFPLLTTKRVFWRGVVEELLWF 85

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102
           + G +N   L    V+IWD  +             ++G+LGP+YG QWR +         
Sbjct: 86  ISGSTNAKQLSEKNVNIWDGNSSREFLDSRGLYNYEEGDLGPVYGFQWRHFGCPYSSMTA 145

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G   DQ+   ++ +R +P SRR I++AWN   ++K+ALPPCHC  QFYV +G+LSCQ
Sbjct: 146 DYKGKGYDQLQQCIKMIREEPESRRIIMTAWNPCDLEKVALPPCHCFVQFYVADGELSCQ 205

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS D+ LG+PFNIASYSLLT M+A +   + G FIHT+GD H+Y  H +   +Q+ R
Sbjct: 206 MYQRSADMGLGVPFNIASYSLLTRMIAHITSLKPGFFIHTIGDAHVYLTHVDALKVQMER 265

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I  N+ ++  FR EDF L +Y+P+  I   ++V
Sbjct: 266 KPRPFPKLKILRNVENIDDFRAEDFELINYKPYPKISMPMAV 307


>gi|311086170|gb|ADP66252.1| thymidylate synthase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
          Length = 264

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 145/264 (54%), Positives = 194/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY+ L++ +I+ G+ ++DRTG GT S FGY M+FDL KGFPLLTTKK H  S+++ELL
Sbjct: 1   MKQYIKLIKKIIRVGNQKKDRTGTGTLSIFGYNMKFDLKKGFPLLTTKKCHIASIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N +YL+ + +SIW+ WA++ G++GPIYG QWR+W   +G+ IDQI +++  L+
Sbjct: 61  WFLKGDTNTAYLNENKISIWNNWANESGDVGPIYGKQWRNWSTPEGHEIDQIKNVLIQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  IDKM LPPCH LFQFYV N  LSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 KNPDSRRMLVSSWNVGDIDKMRLPPCHVLFQFYVFNNTLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YS+L  M+A     + G+F+ T GDVHLYNNH E A  Q+ R PRTLP++ I      L 
Sbjct: 181 YSILIHMIAQQCDLKVGDFLWTGGDVHLYNNHIELAKKQILRIPRTLPKLTILKKPQSLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            + +EDF +  Y P+ AI  ++S+
Sbjct: 241 QYCFEDFKIIGYHPYPAIKGEISI 264


>gi|293364092|ref|ZP_06610828.1| thymidylate synthase [Mycoplasma alligatoris A21JP2]
 gi|292552582|gb|EFF41356.1| thymidylate synthase [Mycoplasma alligatoris A21JP2]
          Length = 289

 Score =  343 bits (879), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 153/294 (52%), Positives = 198/294 (67%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++ V+  G  RRDRTGVGT   FG Q R+DL KGFPLLTTKK+ WK++V ELL
Sbjct: 1   MKQYLKLIKTVLNEGMVRRDRTGVGTIGIFGTQTRYDLRKGFPLLTTKKMAWKAIVIELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91
           WFL+GD+N+ YL  + V+IW+EW                               K G+LG
Sbjct: 61  WFLKGDTNIKYLVDNNVNIWNEWPYEKFKKSSDFKNETLEQFIQKIKTDDDFAQKHGDLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +     N +DQI+ I+Q L+  P+SRR IV+AWN AL+D+MALPPCH LFQ
Sbjct: 121 PVYGKQWRDF-----NGVDQITKIIQELKEKPFSRRMIVNAWNPALVDQMALPPCHALFQ 175

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           FYV  N +LS QLYQRSGD+FLG+PFNIASYSLL  M+A V G + GEF+HT+GD H+Y+
Sbjct: 176 FYVSSNDELSLQLYQRSGDLFLGVPFNIASYSLLLHMVAQVTGLRVGEFVHTIGDAHIYS 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH+EQ + QL+R P  LP + +N  I ++  F+YED  +  Y+ HA I A+V+V
Sbjct: 236 NHYEQVNEQLARRPFKLPTLSLNKEIKNIFDFKYEDIKIEDYKSHAKIKAEVAV 289


>gi|157834186|pdb|1VZB|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Binary Complex
           With Dump
 gi|157834187|pdb|1VZC|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Binary Complex
           With Fdump
 gi|157834188|pdb|1VZD|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Ternary Complex
           With Fdump And Cb3717
 gi|157834189|pdb|1VZE|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Ternary Complex
           With Dump And Cb3717
          Length = 316

 Score =  343 bits (879), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  +LLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSQLLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKAPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|323466728|gb|ADX70415.1| Thymidylate synthase [Lactobacillus helveticus H10]
          Length = 318

 Score =  343 bits (879), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 144/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTG GTRS FG QMRFDLS+GFPLLTTKKV +  +  ELLW
Sbjct: 6   QPYLDLLQKIMSEGHDKDDRTGTGTRSYFGAQMRFDLSQGFPLLTTKKVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVNSSEYQGPDMTDFGLRSQSDPEFNKIYQAEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   +G  IDQI+ +++ ++  P SRR IV+
Sbjct: 126 KFDQRILDDEDFAKKYGNLGDVYGAQWRHWEKREGGFIDQIADVIKQIKETPDSRRMIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNLIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q GEFIHTLGD H+Y NH +Q +  LSR P   PQ+ +NP   ++  F  +D  +  
Sbjct: 246 TGLQVGEFIHTLGDAHIYRNHLKQVEELLSRKPYDSPQLWLNPEKKNIADFEMKDIKVVD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YQHHGTIKAPVAV 318


>gi|307195505|gb|EFN77391.1| Thymidylate synthase [Harpegnathos saltator]
          Length = 302

 Score =  343 bits (879), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 135/284 (47%), Positives = 178/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L+  VIK G+ + +RTGV T S FG Q+RF L  G FPLLTTK+V WK+VV ELL
Sbjct: 19  YQYLRLIEKVIKSGTRKGNRTGVDTYSIFGTQLRFGLRDGVFPLLTTKRVFWKAVVEELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +N   L   G+ IWD+               ++G+LGP+YG QWR +       
Sbjct: 79  WFIKGSTNSKELADKGIHIWDKNGSRAFLDSCGFSDREEGDLGPVYGFQWRHYGAEYKDM 138

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+  ++  ++  P  RR I+SAWN   I KMALPPCH   QFYV NG+LS
Sbjct: 139 HTDYAGQGIDQLKEVIHKIKHSPDDRRIIMSAWNPTDIPKMALPPCHNFIQFYVSNGELS 198

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            QLYQRS D+ LG+PFNIASYSLL  ++A V G + GEF+HT+GD H+Y NH    + Q+
Sbjct: 199 AQLYQRSADMGLGVPFNIASYSLLIYIIAHVTGLKPGEFVHTMGDCHVYINHVSALEEQI 258

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I   I D+  F  EDF L  Y PH+ +  +++V
Sbjct: 259 QRKPRNFPKLKIIREIKDIDDFVAEDFELIDYNPHSKLYMEMAV 302


>gi|157834185|pdb|1VZA|A Chain A, Thymidylate Synthase E60d Mutant Binary Complex With 2'-
           Deoxyuridine 5'-Monophosphate (Dump)
          Length = 316

 Score =  343 bits (879), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  +LLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSDLLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKAPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|307166222|gb|EFN60452.1| Thymidylate synthase [Camponotus floridanus]
          Length = 298

 Score =  343 bits (879), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 135/284 (47%), Positives = 179/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L+  VI+ G+ R +RTGV T S FG Q+RF L  G FPLLTTK+V W++VV ELL
Sbjct: 15  YQYLRLVEKVIRTGAKRNNRTGVDTYSIFGTQIRFSLRDGVFPLLTTKRVFWRAVVEELL 74

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +N   L   GV IWDE               ++G+LGP+YG QWR +       
Sbjct: 75  WFIKGSTNSKELSDKGVHIWDENGSRAFLDSCGFTDREEGDLGPVYGFQWRHFGAEYKDI 134

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+  ++  ++  P  RR I+S WN   I +MALPPCH L QFYV+NG+LS
Sbjct: 135 RTDYTGQGIDQLKEVIHKIKHCPDDRRIIMSNWNPVDIPEMALPPCHVLVQFYVNNGELS 194

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH    + Q+
Sbjct: 195 AQLYQRSADIGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEEQI 254

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I   I ++  F  ED  L  Y+P+  +  K++V
Sbjct: 255 KREPREFPKLRIVREIKNIDDFVAEDLELIDYKPYPKLYMKMAV 298


>gi|323167835|gb|EFZ53526.1| thymidylate synthase [Shigella sonnei 53G]
 gi|323951715|gb|EGB47590.1| thymidylate synthase [Escherichia coli H252]
          Length = 231

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 136/231 (58%), Positives = 177/231 (76%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           MRF+L  GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+
Sbjct: 1   MRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG QWR+WP  DG  IDQI++++  L+ DP SRR IVSAWNV  +DKMAL PCH  FQFY
Sbjct: 61  YGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V +GKLSCQLYQRS DVFLG+PFNIASY+LL  M+A     + G+F+ T GD HLY+NH 
Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHM 180

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +Q  LQLSR PR LP++II      +  +R+EDF +  Y+PH  I A V++
Sbjct: 181 DQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 231


>gi|45188092|ref|NP_984315.1| ADR219Cp [Ashbya gossypii ATCC 10895]
 gi|44982909|gb|AAS52139.1| ADR219Cp [Ashbya gossypii ATCC 10895]
          Length = 340

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 133/291 (45%), Positives = 171/291 (58%), Gaps = 28/291 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
            QYLDL + +I+ G  R DRTG GT S F   Q+RFDLS   FPLLTTKKV  + ++ EL
Sbjct: 50  QQYLDLCKRIIEHGEFRPDRTGTGTYSLFAPPQLRFDLSGDKFPLLTTKKVFTRGIILEL 109

Query: 60  LWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+                ++G+LGP+YG QWR +      
Sbjct: 110 LWFIAGCTDGKKLSEQGVKIWEGNGSREYLDGLGLHDRREGDLGPVYGFQWRHFGAEYGT 169

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-- 157
              DY G  +DQ+  ++  ++  PY RR I+SAWN A   KMALPPCH L QFYV  G  
Sbjct: 170 CDDDYTGKGVDQLRELIDKIKNKPYDRRIILSAWNPADFPKMALPPCHVLSQFYVSFGPE 229

Query: 158 ----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
               KLSCQLYQRS D+ LG+PFNIASY+LLT M+A V     GEFIHT+GD H+Y++H 
Sbjct: 230 GSRPKLSCQLYQRSCDMGLGVPFNIASYALLTKMIAMVCDMDAGEFIHTMGDAHVYSDHI 289

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                Q+ R PR  P + I   + D+  F  +DF +  Y PH  I   +SV
Sbjct: 290 AALKEQIERVPREFPNLRIKRKVTDIDDFTLDDFEITDYNPHPRIQMNMSV 340


>gi|325183269|emb|CCA17727.1| bifunctional dihydrofolate reductasethymidylate synthase 2 putative
           [Albugo laibachii Nc14]
 gi|325183915|emb|CCA18373.1| bifunctional dihydrofolate reductasethymidylate synthase 2 putative
           [Albugo laibachii Nc14]
          Length = 494

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 134/286 (46%), Positives = 184/286 (64%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
           +QYL+L+R+++  G +++DRTGVGT+S FG QMRF+L     PLLTTKKV W+ V  ELL
Sbjct: 209 YQYLNLIRNIVANGVEKQDRTGVGTKSIFGVQMRFNLRNDMFPLLTTKKVFWRGVAEELL 268

Query: 61  WFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------ 102
           WF+ G++N   L    V IWD                ++G+LGPIYG QWR +       
Sbjct: 269 WFISGNTNAKTLQDRKVRIWDGNGSSAYLKSIGLHHREEGDLGPIYGFQWRHFGAKYTDM 328

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G   DQ++ ++  L+ DP  RR I+SAWN   +++MALPPCH + QFYV  G+LS
Sbjct: 329 HADYTGQGFDQLADVILKLKTDPNGRRIILSAWNPNDLNEMALPPCHLMCQFYVAKGQLS 388

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFNIASY+LLT M+A V     GEF+H +GD H+Y NH E   LQL
Sbjct: 389 CQMYQRSADMGLGVPFNIASYALLTKMIAHVTYLTPGEFVHVIGDAHIYLNHLEPLKLQL 448

Query: 221 SRSPRTLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+PR  P ++I P  ++  +  F + DF L++YEP+ AI   ++V
Sbjct: 449 ERTPRPFPTLLIRPRNDLRTIDDFEFTDFELQNYEPYMAIKMAMAV 494


>gi|58337204|ref|YP_193789.1| thymidylate synthase [Lactobacillus acidophilus NCFM]
 gi|227903787|ref|ZP_04021592.1| thymidylate synthase [Lactobacillus acidophilus ATCC 4796]
 gi|62901151|sp|Q5FKL6|TYSY_LACAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|58254521|gb|AAV42758.1| thymidylate synthase [Lactobacillus acidophilus NCFM]
 gi|227868674|gb|EEJ76095.1| thymidylate synthase [Lactobacillus acidophilus ATCC 4796]
          Length = 318

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 146/313 (46%), Positives = 183/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL+  ++  G D+ DRTG GTRS FG QMRFDLSKGFP+LTTKKV +  +  ELLW
Sbjct: 6   QPYLDLINKIMIEGHDKNDRTGTGTRSYFGAQMRFDLSKGFPILTTKKVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHKNHIWDEWAFKNWVNSDEYTGPDMTDFGLRSQSDPEFNKIYQAELK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   DG+ IDQI ++++ ++ +P SRR IV+
Sbjct: 126 KFDRRILDDENFAKKYGNLGDVYGAQWRHWQKRDGSFIDQIENVIEQIKNNPDSRRMIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL  M+A  
Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q GEFIHTLGD H+Y+NHF Q    LSR P   PQ+ +NP    +  F  +D  L  
Sbjct: 246 TGLQVGEFIHTLGDAHIYSNHFSQVKEMLSRKPYESPQLWLNPEKKHIEDFDMQDIKLVD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YKHHGTIKAPVAV 318


>gi|6729993|pdb|1BO8|A Chain A, Thymidylate Synthase R178t Mutant
          Length = 316

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYS R IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSTRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|157831558|pdb|1JMF|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
 gi|157834039|pdb|1TVU|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
          Length = 316

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFAIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|178847032|pdb|2H2Q|A Chain A, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate
           Reductase-Thymidylate Synthase
 gi|178847033|pdb|2H2Q|B Chain B, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate
           Reductase-Thymidylate Synthase
 gi|219689203|pdb|3CL9|A Chain A, Structure Of Bifunctional Tcdhfr-Ts In Complex With Mtx
 gi|219689204|pdb|3CLB|A Chain A, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
 gi|219689205|pdb|3CLB|B Chain B, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
 gi|219689206|pdb|3CLB|C Chain C, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
 gi|219689207|pdb|3CLB|D Chain D, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
 gi|237824093|pdb|3HBB|A Chain A, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
           Of Trypanosoma Cruzi In The Folate-Free State And In
           Complex With Two Antifolate Drugs, Trimetrexate And
           Methotrexate
 gi|237824094|pdb|3HBB|B Chain B, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
           Of Trypanosoma Cruzi In The Folate-Free State And In
           Complex With Two Antifolate Drugs, Trimetrexate And
           Methotrexate
 gi|237824095|pdb|3HBB|C Chain C, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
           Of Trypanosoma Cruzi In The Folate-Free State And In
           Complex With Two Antifolate Drugs, Trimetrexate And
           Methotrexate
 gi|237824096|pdb|3HBB|D Chain D, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
           Of Trypanosoma Cruzi In The Folate-Free State And In
           Complex With Two Antifolate Drugs, Trimetrexate And
           Methotrexate
 gi|297787629|pdb|3KJS|A Chain A, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
           D Inhibitors: Dq1 Inhibitor Complex
 gi|297787630|pdb|3KJS|B Chain B, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
           D Inhibitors: Dq1 Inhibitor Complex
 gi|297787631|pdb|3KJS|C Chain C, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
           D Inhibitors: Dq1 Inhibitor Complex
 gi|297787632|pdb|3KJS|D Chain D, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
           D Inhibitors: Dq1 Inhibitor Complex
 gi|20270967|gb|AAM18488.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|322825519|gb|EFZ30453.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma
           cruzi]
          Length = 521

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 129/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++       L  +   D  +  Y P+  I  K++V
Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521


>gi|157831559|pdb|1JMG|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
          Length = 316

 Score =  342 bits (877), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFGIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|313637263|gb|EFS02769.1| thymidylate synthase [Listeria seeligeri FSL S4-171]
          Length = 314

 Score =  342 bits (877), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 148/314 (47%), Positives = 190/314 (60%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL ++V++ G+ + DRTG GT STFGYQMRF+L  GFP++TTK+V +K VV ELL
Sbjct: 1   MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFNLQDGFPIMTTKRVPFKLVVSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL GD+N+ YL +H  +IW+EWA                                    
Sbjct: 61  WFLHGDTNIRYLLQHKNNIWNEWAFERFVKSADYKGEDMTNFGLRAESDPAFKEVYQAEM 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                          K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IV
Sbjct: 121 ESFKTHILEDADFAKKYGELGNIYGKQWREWKTSQGETIDQLADVIELIKTNPNSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+L   ++A 
Sbjct: 181 SAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALXXXLIAR 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G   GEF+HT+GD HLYNNH EQ   QLSR+P  LP++I++     +  F   D +L 
Sbjct: 241 ETGLDVGEFVHTMGDAHLYNNHIEQVKEQLSRTPHALPKLILSDKPATIFDFDVADISLD 300

Query: 251 SYEPHAAILAKVSV 264
            Y P A+I A +SV
Sbjct: 301 GYNPDASIKAPISV 314


>gi|157834024|pdb|1TSY|A Chain A, Thymidylate Synthase R179k Mutant
 gi|157834025|pdb|1TSZ|A Chain A, Thymidylate Synthase R179k Mutant
          Length = 316

 Score =  342 bits (877), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR+ IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRKLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|161507385|ref|YP_001577339.1| thymidylate synthase [Lactobacillus helveticus DPC 4571]
 gi|260101724|ref|ZP_05751961.1| thymidylate synthase [Lactobacillus helveticus DSM 20075]
 gi|172048271|sp|A8YUW0|TYSY_LACH4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|160348374|gb|ABX27048.1| Thymidylate synthase [Lactobacillus helveticus DPC 4571]
 gi|260084460|gb|EEW68580.1| thymidylate synthase [Lactobacillus helveticus DSM 20075]
 gi|328467983|gb|EGF39009.1| thymidylate synthase [Lactobacillus helveticus MTCC 5463]
          Length = 318

 Score =  342 bits (877), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G  + DRTG GTRS FG QMRFDLS+GFPLLTTKKV +  +  ELLW
Sbjct: 6   QPYLDLLQKIMSEGHGKDDRTGTGTRSYFGAQMRFDLSQGFPLLTTKKVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVNSSEYQGPDMTDFGLRSQSDPEFNKIYQAEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   +G  IDQI+ +++ ++  P SRR IV+
Sbjct: 126 KFDQRILDDEDFAKKYGNLGDVYGAQWRHWEKREGGFIDQIADVIKQIKETPDSRRMIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNLIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q GEFIHTLGD H+Y NH +Q +  LSR P   PQ+ +NP   ++  F  +D  +  
Sbjct: 246 TGLQVGEFIHTLGDAHIYRNHLKQVEELLSRKPYDSPQLWLNPEKKNIADFEMKDIKVVD 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YQHHGTIKAPVAV 318


>gi|331701412|ref|YP_004398371.1| Thymidylate synthase [Lactobacillus buchneri NRRL B-30929]
 gi|329128755|gb|AEB73308.1| Thymidylate synthase [Lactobacillus buchneri NRRL B-30929]
          Length = 316

 Score =  342 bits (877), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL R+V++ G  + DRT  GT STFGYQMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLDLARYVLENGHKKTDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ +L +H   IWDEWA                                       
Sbjct: 66  KGDTNIQFLLKHKNHIWDEWAFEKFVASNDYTGPDMTDFSHRAQKDPEFNKVYQEQKMLF 125

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IVSAW
Sbjct: 126 CDRIVNDDDFAKKYGDLGLVYGSQWRAWKTSTGGTIDQIQNVIDLIKTHPDSRRMIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV++GKLSCQLYQRSGD+FLG+P+NIASY+LLT M+A   G
Sbjct: 186 NPEDVPTMALPPCHTLFQFYVNDGKLSCQLYQRSGDIFLGVPYNIASYALLTSMIARECG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + G+F+HT GD H+Y NH +Q +  LSR PR  P++ +NP    L  F   D  +++Y+
Sbjct: 246 LEVGDFVHTFGDAHIYLNHIDQVEELLSRKPRQAPELWLNPEKKHLDEFEMADIKVKNYD 305

Query: 254 PHAAILAKVSV 264
           P+  I A V+V
Sbjct: 306 PYPVIKAPVAV 316


>gi|330983977|gb|EGH82080.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 277

 Score =  341 bits (876), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 135/277 (48%), Positives = 178/277 (64%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  VI  G  + DRTG GT++ FG Q R +L+ GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKAYLDLLTDVITNGVVKGDRTGTGTKAVFGRQFRHNLADGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L G++NV++L  +GVSIW+EWA +DG LGP+YG QW +WP  DG  I+QI  ++  L+
Sbjct: 61  WMLSGNTNVNWLKENGVSIWNEWATEDGYLGPLYGEQWTAWPTKDGGTINQIDYVINMLK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              KMALPPCH L+QFYV + KLS  LY RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDESMSPQENARNGKMALPPCHLLYQFYVADNKLSSHLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+ LG P+N+AS SLLT MLA        E I T GD H Y NH +Q   QLSR+PR L
Sbjct: 181 SDLLLGNPYNLASVSLLTHMLAQQCDLIPHEVIITTGDTHAYLNHMDQIHEQLSRTPRKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I      +  +R+EDF +  Y+P+ +I A V+V
Sbjct: 241 PELKILRKPDSIYDYRFEDFEIVGYDPYPSIKAPVAV 277


>gi|20270965|gb|AAM18487.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 521

 Score =  341 bits (876), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 129/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++       L  +   D  +  Y P+  I  K++V
Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521


>gi|71653378|ref|XP_815327.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi
           strain CL Brener]
 gi|2833338|sp|Q27793|DRTS_TRYCR RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|301598498|pdb|3INV|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph, Dump And C-448 Antifolate
 gi|301598499|pdb|3INV|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph, Dump And C-448 Antifolate
 gi|301598500|pdb|3IRM|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Cycloguanil
 gi|301598501|pdb|3IRM|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Cycloguanil
 gi|301598502|pdb|3IRM|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Cycloguanil
 gi|301598503|pdb|3IRM|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Cycloguanil
 gi|301598504|pdb|3IRN|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Cycloguanil
 gi|301598505|pdb|3IRN|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Cycloguanil
 gi|301598506|pdb|3IRN|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Cycloguanil
 gi|301598507|pdb|3IRN|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Cycloguanil
 gi|301598508|pdb|3IRO|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Q-8 Antifolate
 gi|301598509|pdb|3IRO|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Q-8 Antifolate
 gi|301598510|pdb|3IRO|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Q-8 Antifolate
 gi|301598511|pdb|3IRO|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
           Synthase Complexed With Nadph And Q-8 Antifolate
 gi|1899001|gb|AAB49898.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|70880375|gb|EAN93476.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma
           cruzi]
          Length = 521

 Score =  341 bits (876), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 129/284 (45%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 418 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++       L  +   D  +  Y P+  I  K++V
Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521


>gi|315655589|ref|ZP_07908487.1| thymidylate synthase [Mobiluncus curtisii ATCC 51333]
 gi|315489653|gb|EFU79280.1| thymidylate synthase [Mobiluncus curtisii ATCC 51333]
          Length = 272

 Score =  341 bits (876), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 133/263 (50%), Positives = 183/263 (69%), Gaps = 2/263 (0%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           HQY DLL  ++  G D+ DRTG GT S FG Q+R+DLS+GFP +TTK ++W  VV ELLW
Sbjct: 12  HQYEDLLADIMSQGIDKSDRTGTGTHSIFGRQLRYDLSQGFPAITTKSLYWHGVVGELLW 71

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           FL+G +N  +L  + + IWDEWA++ G+LGPIYG QWR+WP   G  +DQ+  ++++L+ 
Sbjct: 72  FLQGGTNNHWLQENNIHIWDEWANESGDLGPIYGHQWRAWPTAAG-PVDQVKKLLETLQN 130

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR +VSAWNV+ +D+MAL PCH  FQ +V  G+LS Q+YQRS D+FLG+PFNIASY
Sbjct: 131 DPSSRRMLVSAWNVSDLDQMALAPCHAFFQCWVGQGRLSLQIYQRSADMFLGVPFNIASY 190

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS 241
           +LLT MLA     Q GE + T GD H+Y+NH +Q  LQLSR P   P + ++     +  
Sbjct: 191 ALLTHMLAQQSNLQVGELVWTGGDCHIYSNHVDQVSLQLSREPYPFPILELD-KADSIDG 249

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           + ++   L++Y+ H  I A V+V
Sbjct: 250 YTFDMIRLKNYQHHPKISAPVAV 272


>gi|259503404|ref|ZP_05746306.1| thymidylate synthase [Lactobacillus antri DSM 16041]
 gi|259168649|gb|EEW53144.1| thymidylate synthase [Lactobacillus antri DSM 16041]
          Length = 320

 Score =  341 bits (876), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 189/313 (60%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R+V+K G ++ DRTG GTRS FGYQMRFDLSKGFP+LTTKKV +  +  ELLW
Sbjct: 8   QQYLELARYVLKHGHEKTDRTGTGTRSVFGYQMRFDLSKGFPILTTKKVPFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIRFLLQHHNHIWDEWAFKKWVESDEYHGPDMTDFGHRWLVDADFKQQYLAEKK 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W   +G  IDQI++++  ++  P SRR IVS
Sbjct: 128 AFCQRIVDDEDFAKKYGDLGLVYGSQWRHWKTSNGQTIDQIANVIHQIKTTPDSRRMIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q G+F+HTLGD H+Y NH +Q   QLSR+PR  PQ+I+      +  +   D  L  
Sbjct: 248 CGLQVGDFVHTLGDAHIYLNHLDQVKEQLSRTPREAPQLILPAEPKPIDQYEMTDIKLAG 307

Query: 252 YEPHAAILAKVSV 264
           Y   AAI A V+V
Sbjct: 308 YTHEAAIKAPVAV 320


>gi|157833915|pdb|1TDA|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal
           Deletion: Role Of The C-Terminus In Alignment Of DUMP
           AND Ch2h4folate
 gi|157833916|pdb|1TDB|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal
           Deletion: Role Of The C-Terminus In Alignment Of DUMP
           AND Ch2h4folate
 gi|157833917|pdb|1TDC|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal
           Deletion: Role Of The C-Terminus In Alignment Of DUMP
           AND Ch2h4folate
 gi|157836378|pdb|2TDD|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal
           Deletion: Role Of The C-Terminus In Alignment Of DUMP
           AND Ch2h4folate
          Length = 315

 Score =  341 bits (876), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 145/312 (46%), Positives = 186/312 (59%), Gaps = 50/312 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVS 263
           Y+P+ AI A V+
Sbjct: 304 YDPYPAIKAPVA 315


>gi|157832137|pdb|1NJA|A Chain A, Thymidylate Synthase, Mutation, N229c With
           2'-Deoxycytidine 5'-Monophosphate (Dcmp)
 gi|157832138|pdb|1NJB|A Chain A, Thymidylate Synthase
 gi|157834040|pdb|1TVV|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
          Length = 316

 Score =  341 bits (876), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFCIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|146329360|ref|YP_001209479.1| thymidylate synthase [Dichelobacter nodosus VCS1703A]
 gi|166231696|sp|A5EVG5|TYSY_DICNV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|146232830|gb|ABQ13808.1| thymidylate synthase [Dichelobacter nodosus VCS1703A]
          Length = 258

 Score =  341 bits (876), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 156/250 (62%), Positives = 193/250 (77%), Gaps = 6/250 (2%)

Query: 15  GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74
           G D+ DRTGVGTRS FGYQMRFDL+ GFPLLTTKK+H+KS+V+ELLWFL G++N++YL++
Sbjct: 15  GVDKSDRTGVGTRSLFGYQMRFDLAAGFPLLTTKKMHFKSIVYELLWFLSGNTNIAYLNQ 74

Query: 75  HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           +GVSIWDEWADK+G+LGPIYG QWR+W        DQI  ++ SL+ +P SRR +VS+WN
Sbjct: 75  NGVSIWDEWADKNGDLGPIYGKQWRNWAGR-----DQIHQVLTSLKTNPDSRRMLVSSWN 129

Query: 135 VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
           VA +++MALPPCH LFQFYV NG+LSCQLYQRS DVFLG+PFNIASY+LLTMM+A     
Sbjct: 130 VAQLEEMALPPCHVLFQFYVANGRLSCQLYQRSADVFLGVPFNIASYALLTMMMAQQADL 189

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
           + G+F+ T GDVHLY NHF QA  QL R P  LP+M I      +  + +EDF L  Y  
Sbjct: 190 ELGDFVWTGGDVHLYRNHFAQAQEQLKRQPYPLPKMHIKRA-KSIDDYVFEDFLLVDYRC 248

Query: 255 HAAILAKVSV 264
           HAAI A V+V
Sbjct: 249 HAAIKAPVAV 258


>gi|227877073|ref|ZP_03995156.1| thymidylate synthase [Lactobacillus crispatus JV-V01]
 gi|256850330|ref|ZP_05555759.1| thymidylate synthase [Lactobacillus crispatus MV-1A-US]
 gi|262045992|ref|ZP_06018956.1| thymidylate synthase [Lactobacillus crispatus MV-3A-US]
 gi|227863321|gb|EEJ70757.1| thymidylate synthase [Lactobacillus crispatus JV-V01]
 gi|256712967|gb|EEU27959.1| thymidylate synthase [Lactobacillus crispatus MV-1A-US]
 gi|260573951|gb|EEX30507.1| thymidylate synthase [Lactobacillus crispatus MV-3A-US]
          Length = 318

 Score =  341 bits (876), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV +  +  ELLW
Sbjct: 6   QPYLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWIESAEYQGADMTDFGLRSQSDPEFNQVYQAEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W    G  IDQI+++++ ++  P SRR IV+
Sbjct: 126 KFDQRILDDPAFAQKYGNLGDVYGAQWRHWEKRSGGFIDQIANVIKQIKETPDSRRMIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  M+A  
Sbjct: 186 AWNPEDIPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF Q    LSR+P   P++ +NP    +  F  +D  + +
Sbjct: 246 TGLKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLN 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YQHHGTIKAPVAV 318


>gi|13242405|ref|NP_077428.1| thymidylate synthase [Cercopithecine herpesvirus 9]
 gi|11036557|gb|AAG27186.1|AF275348_6 thymidylate synthetase [Cercopithecine herpesvirus 9]
          Length = 295

 Score =  341 bits (876), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 126/283 (44%), Positives = 175/283 (61%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+ +  ++  G  + DRTG GT S FG Q R++L   FPLLTTK+V WK VV ELLW
Sbjct: 13  YQYLEQVNFILHNGVQKTDRTGTGTLSVFGMQSRYNLRNEFPLLTTKRVFWKGVVEELLW 72

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102
           F++G +N + L   GV IW     K            +G+LGP+YG QWR +        
Sbjct: 73  FIKGSTNSTELVEKGVKIWSAHGSKQFLHSNGFDNRQEGDLGPVYGFQWRHFGAEYVDMN 132

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y G  +DQ+ +++  ++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSC
Sbjct: 133 TNYFGQGVDQLQNVINLIKTNPNDRRIILCAWNAKDVPLMALPPCHMLCQFYVANNELSC 192

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT M+A V   + G+ +HT+GD H+Y NH E   LQL+
Sbjct: 193 QMYQRSADMGLGVPFNIASYALLTYMIAHVTDLKTGDLVHTIGDAHIYLNHIEPLKLQLT 252

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P+  P + I   + D+  F+ +DF L  Y PH +I  ++SV
Sbjct: 253 RQPKQFPTLRITRTVKDINDFKADDFVLEGYNPHNSIPMEMSV 295


>gi|157834021|pdb|1TSV|A Chain A, Thymidylate Synthase R179a Mutant
 gi|157834022|pdb|1TSW|A Chain A, Thymidylate Synthase R179a Mutant
          Length = 316

 Score =  341 bits (876), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR  IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRALIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|87122432|ref|ZP_01078312.1| thymidylate synthetase [Marinomonas sp. MED121]
 gi|86162225|gb|EAQ63510.1| thymidylate synthetase [Marinomonas sp. MED121]
          Length = 277

 Score =  341 bits (876), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 135/277 (48%), Positives = 190/277 (68%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y+ LL  V++ G  + DRTG GT S FG Q+R+DL++GFPLLTTKK+H +S++HELL
Sbjct: 1   MLPYIQLLNDVLENGQFKGDRTGTGTYSVFGRQVRYDLAEGFPLLTTKKLHIRSILHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+G++N+ YL  +GV+IWDEWA K+GELGP+YG QWRSW   DG   DQ+++++ SL+
Sbjct: 61  WFLKGETNIQYLSDNGVTIWDEWATKEGELGPVYGAQWRSWKGEDGKEYDQVTALINSLK 120

Query: 121 ADPYSRRHIVSAWNVALIDK-------------MALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRRHI++ WNVA +               MALPPCH L+QFYV + KLS  LY RS
Sbjct: 121 NNPNSRRHIINGWNVACLPDESKAPDVNAAEGRMALPPCHVLYQFYVCDNKLSASLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+FLG P+N AS + LT MLA       GE + ++GD HLY+NH EQA +Q+ R+P+ L
Sbjct: 181 NDLFLGNPYNTASLAFLTHMLAQQCDLDVGEIVISIGDCHLYSNHIEQAKIQVQRTPKKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++ I+     +  +++EDF +  Y+P   I A +++
Sbjct: 241 PKLKIHRKPESIFDYKFEDFEILDYDPEPHISAPIAI 277


>gi|6729992|pdb|1BO7|A Chain A, Thymidylate Synthase R179t Mutant
          Length = 316

 Score =  341 bits (875), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR  IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRTLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|308180682|ref|YP_003924810.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308046173|gb|ADN98716.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 316

 Score =  341 bits (875), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
            GD+N+ YL +H   IWDEWA K+                                    
Sbjct: 66  HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFASIYQAQMQTF 125

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W    G  IDQI+++++ ++  P SRR IVSAW
Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD H+Y NH EQ   QL+R PR  PQ+ ++     +  ++  D  L  Y+
Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305

Query: 254 PHAAILAKVSV 264
           P  AI A V++
Sbjct: 306 PAPAIKAPVAI 316


>gi|254556739|ref|YP_003063156.1| thymidylate synthase [Lactobacillus plantarum JDM1]
 gi|254045666|gb|ACT62459.1| thymidylate synthase [Lactobacillus plantarum JDM1]
          Length = 316

 Score =  341 bits (875), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
            GD+N+ YL +H   IWDEWA K+                                    
Sbjct: 66  HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFAPIYQAQIQAF 125

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W    G  IDQI+++++ ++  P SRR IVSAW
Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD H+Y NH EQ   QL+R PR  PQ+ ++     +  ++  D  L  Y+
Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305

Query: 254 PHAAILAKVSV 264
           P  AI A V++
Sbjct: 306 PAPAIKAPVAI 316


>gi|256847163|ref|ZP_05552609.1| thymidylate synthase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715827|gb|EEU30802.1| thymidylate synthase [Lactobacillus coleohominis 101-4-CHN]
          Length = 320

 Score =  341 bits (875), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 144/313 (46%), Positives = 185/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL R+V++ G  + DRTG GTRS FGYQMRFDL KGFP+LTTKKV +  +  ELLW
Sbjct: 8   QQYLDLARYVLENGHLKGDRTGTGTRSIFGYQMRFDLQKGFPILTTKKVAFGLIKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEWA                                     
Sbjct: 68  FLRGDTNIRFLLQHNNHIWDEWAFKKWVTSAEYQGPDMTDFGHRWLSDPDFKEQYLAEKK 127

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWRSW    G+ IDQI +++  ++ +P SRR IVS
Sbjct: 128 QFCQRVLNDDEFAKKYGDLGLVYGSQWRSWRTSRGDTIDQIQNVINEIKKNPNSRRLIVS 187

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH +FQFYV++GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 188 AWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIARE 247

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
              + G+F+HTLGD H+YNNH +Q   QL R   + P++I       L  +  +D  L  
Sbjct: 248 CQLEVGDFVHTLGDAHIYNNHIKQIKEQLMRQVHSAPKLIFPNGTKSLDEYTVDDIKLDG 307

Query: 252 YEPHAAILAKVSV 264
           Y+   AI A V+V
Sbjct: 308 YQHEPAIKAPVAV 320


>gi|184155363|ref|YP_001843703.1| thymidylate synthase [Lactobacillus fermentum IFO 3956]
 gi|227515167|ref|ZP_03945216.1| thymidylate synthase [Lactobacillus fermentum ATCC 14931]
 gi|183226707|dbj|BAG27223.1| thymidylate synthase [Lactobacillus fermentum IFO 3956]
 gi|227086499|gb|EEI21811.1| thymidylate synthase [Lactobacillus fermentum ATCC 14931]
 gi|299783196|gb|ADJ41194.1| Thymidylate synthase [Lactobacillus fermentum CECT 5716]
          Length = 319

 Score =  341 bits (875), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 188/313 (60%), Gaps = 51/313 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL RHV++FG  + DRTG GT+S FGYQMRF+L +GFP+LTTKKV +  V  ELLW
Sbjct: 8   EQYLDLARHVLEFGDQKGDRTGTGTKSVFGYQMRFNLQEGFPILTTKKVAFGLVKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK----------------------------------- 86
           FLRGD+N+ +L  H   IWDEWA K                                   
Sbjct: 68  FLRGDTNIRFLLEHKNHIWDEWAFKKWVESDEYTGPDMTDFGRRSLVDAAFNEEYKKEKR 127

Query: 87  ---------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWRSW   +G  +DQI  +++ ++ +P SRR IV+
Sbjct: 128 AFCQRILEDDDFAKQYGNLGLVYGSQWRSWQTPNG-PVDQIKKVIEQIKTNPDSRRLIVT 186

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN A +D MALPPCH +FQFYV+NGKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 187 AWNPADVDNMALPPCHTMFQFYVNNGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 246

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NH +Q   QLSR     PQ+I+      +  ++ ED  L  
Sbjct: 247 CGLEVGEFVHTLGDAHIYLNHLDQIKEQLSRPVHQAPQLILPAEAKPIDEYQMEDIKLEG 306

Query: 252 YEPHAAILAKVSV 264
           YE   AI A V+V
Sbjct: 307 YEHEDAIKAPVAV 319


>gi|93279921|pdb|2G86|A Chain A, L. Casei Thymidylate Synthase Y261f In Complex With
           Substrate, Dump
          Length = 316

 Score =  341 bits (875), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HL+ NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLFVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|3097056|emb|CAA05895.1| dihydrofolate reductase-thymidylate synthetase precursor [Daucus
           carota]
          Length = 577

 Score =  341 bits (875), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 128/282 (45%), Positives = 170/282 (60%), Gaps = 21/282 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+ ++I  G  + DRT  GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 296 YLGLVENIISNGVTKNDRTRTGTVSIFGCQMRFNLRKSFPLLTTKKVFWRGVVEELLWFI 355

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G +N   L   GV+IW+                ++G+LGPIYG QWR +         D
Sbjct: 356 SGSTNAKILKEKGVNIWEGNGSREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTDMHAD 415

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 416 YSGQGFDQLLDVISKIKNNPDDRRIIQSAWNPSDLRLMALPPCHMFAQFYVANGELSCQM 475

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSR 222
           YQRS D+ LG+PFNIA+Y+LLT M+A V     G+F+H++GD H+Y+NH     +     
Sbjct: 476 YQRSADMGLGVPFNIAAYALLTCMIAHVCDLVPGDFVHSIGDAHVYSNHLSDLFETSFRM 535

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P+T P + IN    D+ SF   DF L  Y+PH  I  K++V
Sbjct: 536 LPKTFPVLKINSGEKDIDSFEAADFKLIGYDPHQKIEMKMAV 577


>gi|157834023|pdb|1TSX|A Chain A, Thymidylate Synthase R179e Mutant
          Length = 316

 Score =  341 bits (875), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR  IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRELIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|157831560|pdb|1JMH|A Chain A, Contributions Of Orientation And Hydrogen Bonding To
           Catalysis In Asn-229 Mutants Of Thymidylate Synthase
          Length = 316

 Score =  341 bits (874), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PF IASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFIIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|28378525|ref|NP_785417.1| thymidylate synthase [Lactobacillus plantarum WCFS1]
 gi|300767470|ref|ZP_07077382.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|38258752|sp|Q88W05|TYSY_LACPL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|28271361|emb|CAD64266.1| thymidylate synthase [Lactobacillus plantarum WCFS1]
 gi|300495289|gb|EFK30445.1| thymidylate synthase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
          Length = 316

 Score =  341 bits (874), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 146/311 (46%), Positives = 184/311 (59%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L R +++ G+ + DRTG GT S FGYQMRFDLS+GFPLLTTKKV +  +  ELLWFL
Sbjct: 6   YLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
            GD+N+ YL +H   IWDEWA K+                                    
Sbjct: 66  HGDTNIQYLLQHHNHIWDEWAFKNWVTSADYDGPDMTNFEHRRLDDPDFAPIYQAQMQTF 125

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G LG +YG QWR W    G  IDQI+++++ ++  P SRR IVSAW
Sbjct: 126 DDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQGKTIDQIANVIEMIKTHPDSRRLIVSAW 185

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASY+LLT ++A   G
Sbjct: 186 NPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALLTHLIAKETG 245

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
              GEF+HTLGD H+Y NH EQ   QL+R PR  PQ+ ++     +  ++  D  L  Y+
Sbjct: 246 LAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYD 305

Query: 254 PHAAILAKVSV 264
           P  AI A V++
Sbjct: 306 PAPAIKAPVAI 316


>gi|208969084|dbj|BAG74311.1| dihydrofolate reductase-thymidylate synthase [Babesia gibsoni]
          Length = 515

 Score =  341 bits (874), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 133/281 (47%), Positives = 181/281 (64%), Gaps = 20/281 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+L  V+  G+ +++RTG    S FGYQMRFDLSK FPLLTTKKV  +S++ ELLWF
Sbjct: 229 QYLDILADVLSNGTLKQNRTGTDAYSKFGYQMRFDLSKSFPLLTTKKVALRSIIEELLWF 288

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           +RG +N + L    V IW+                ++ +LGP+YG QWR +         
Sbjct: 289 IRGSTNGNDLLAKNVRIWELNGARSFLDNLGFTDREEHDLGPVYGFQWRHFGAKYLDMHA 348

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  IDQ+ ++++ ++ +P  RR IV +WNVA + KMALPPCHC FQFYV +GKLSC 
Sbjct: 349 DYSGQGIDQLKTVIEKIKTNPNDRRLIVCSWNVADLGKMALPPCHCFFQFYVKDGKLSCL 408

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYS+LT M+A V G Q GEF+H L D H+Y +H E   LQ+SR
Sbjct: 409 MHQRSCDLGLGVPFNIASYSILTAMIAQVCGLQLGEFVHNLADAHVYVDHVEPVKLQMSR 468

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            P   PQ+ +NP++ D+  F  +D  + +Y  H  I   +S
Sbjct: 469 VPYPFPQLKLNPDVKDIEGFTIDDIQVVNYVSHPPIKMAMS 509


>gi|1093364|prf||2103303A dihydrofolate reductase/thymidylate synthase
          Length = 521

 Score =  341 bits (874), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 128/284 (45%), Positives = 174/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 238 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 297

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 298 WFLRGETYAKKLSDKGVHIWDDNGSRRFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 357

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 358 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 417

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ L +PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 418 CMLYQRSCDMGLAVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 477

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P ++       L  +   D  +  Y P+  I  K++V
Sbjct: 478 KRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521


>gi|260662124|ref|ZP_05863020.1| thymidylate synthase [Lactobacillus fermentum 28-3-CHN]
 gi|260553507|gb|EEX26399.1| thymidylate synthase [Lactobacillus fermentum 28-3-CHN]
          Length = 319

 Score =  341 bits (874), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 189/313 (60%), Gaps = 51/313 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL RHV++FG  + DRTG GT+S FGYQMRF+L +GFP+LTTKKV +  V  ELLW
Sbjct: 8   EQYLDLARHVLEFGDQKGDRTGTGTKSVFGYQMRFNLQEGFPILTTKKVAFGLVKSELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK----------------------------------- 86
           FLRGD+N+ +L  H   IWDEWA K                                   
Sbjct: 68  FLRGDTNIRFLLEHKNHIWDEWAFKKWVESDEYTGPDMTDFGRRSLVDAAFNEEYKKEKR 127

Query: 87  ---------------DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G+LG +YG QWRSW   +G  +DQI  +++ ++ +P SRR IV+
Sbjct: 128 AFCQRILEDDDFAKQYGDLGLVYGSQWRSWQTPNG-PVDQIKKVIEQIKTNPASRRLIVT 186

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN A +D MALPPCH +FQFYV+NGKLSCQLYQRS D+FLG+PFNIASY+LLT M+A  
Sbjct: 187 AWNPADVDNMALPPCHTMFQFYVNNGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQ 246

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NH +Q   QLSR     PQ+I+      +  ++ ED  L  
Sbjct: 247 CGLEVGEFVHTLGDAHIYLNHLDQIKEQLSRPVHQAPQLILPAEAKPIDEYQMEDIKLEG 306

Query: 252 YEPHAAILAKVSV 264
           YE   AI A V+V
Sbjct: 307 YEHEDAIKAPVAV 319


>gi|242006823|ref|XP_002424244.1| Thymidylate synthase, putative [Pediculus humanus corporis]
 gi|212507613|gb|EEB11506.1| Thymidylate synthase, putative [Pediculus humanus corporis]
          Length = 316

 Score =  340 bits (873), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 129/283 (45%), Positives = 186/283 (65%), Gaps = 20/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QY++ +++++K G + +DRTGVGT S FG QM++ L   FPLLTTK+V WK +V ELLW
Sbjct: 34  YQYINHIKNIMKNGVEMKDRTGVGTLSIFGAQMKWSLKDVFPLLTTKRVFWKGIVEELLW 93

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           FLRG +N   L   GVSIWD  +             ++G+LGP+YG QWR +        
Sbjct: 94  FLRGSTNALELKEKGVSIWDANSSREFLDSLGFYDREEGDLGPVYGFQWRHFGAKYKTMH 153

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    IDQ+ +I+ +++  PY RR I+SAWN   I  MALPPCHCL QF+V NG+L+ 
Sbjct: 154 DDYTNQGIDQLQNIIDTIKKRPYDRRMIMSAWNPVDIPIMALPPCHCLVQFHVANGELNS 213

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V   + G F+H++GD H+Y NH +  ++Q+ 
Sbjct: 214 QMYQRSADMGLGVPFNIASYSLLTYMVAHVTNLKPGVFVHSMGDSHIYLNHLKPLEVQIQ 273

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P++ I   + ++  F+++DF L  Y P+  I  +++V
Sbjct: 274 RTPRPFPKLSIVRQVSNINDFKFDDFKLEGYNPYPKIQMEMAV 316


>gi|256843019|ref|ZP_05548507.1| thymidylate synthase [Lactobacillus crispatus 125-2-CHN]
 gi|312977199|ref|ZP_07788947.1| thymidylate synthase [Lactobacillus crispatus CTV-05]
 gi|256614439|gb|EEU19640.1| thymidylate synthase [Lactobacillus crispatus 125-2-CHN]
 gi|310895630|gb|EFQ44696.1| thymidylate synthase [Lactobacillus crispatus CTV-05]
          Length = 318

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 181/313 (57%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV +  +  ELLW
Sbjct: 6   QPYLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVQSPEYQGPDMTNFGLRSQSDPEFNQVYQAEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W    G  IDQI+ +++ ++  P SRR IV+
Sbjct: 126 KFDQRILDDPAFAQKYGNLGDVYGAQWRHWEKRTGGFIDQIADVIKQIKETPDSRRMIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  M+A  
Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF Q    LSR+P   P++ +NP    +  F  +D  + +
Sbjct: 246 TGLKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLN 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YQHHGTIKAPVAV 318


>gi|320580614|gb|EFW94836.1| Thymidylate synthase [Pichia angusta DL-1]
          Length = 296

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 131/290 (45%), Positives = 175/290 (60%), Gaps = 27/290 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
             YLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV +K ++HEL
Sbjct: 7   QAYLDLCQRIISEGEHRPDRTGTGTYSVFAPPQLRFSLKDNKFPLLTTKKVFFKGILHEL 66

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102
           LWF+ G+++   L   GV IW+                ++G+LGP+YG QWR +      
Sbjct: 67  LWFIAGETDAKKLTEKGVKIWEGNGSREYLDSLGLTHRREGDLGPVYGFQWRHFGAEYVD 126

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK- 158
              DY G   DQ++ I+ +LR +PY RR I+SAWN      MALPPCH   QFYV   K 
Sbjct: 127 CDTDYTGKGYDQLAKIIDTLRTNPYDRRIILSAWNPPAFKDMALPPCHVFCQFYVSFPKN 186

Query: 159 ----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
               LSC +YQRS D+ LG+PFNIASY+LLT M++ V+  + GEFIHT+GD H+Y +H +
Sbjct: 187 SKPQLSCIMYQRSCDMGLGVPFNIASYALLTHMISHVVDMEPGEFIHTMGDSHVYCDHVD 246

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               QL R+PR  P + IN  +  +  FR+EDF ++ YEP+  I  ++SV
Sbjct: 247 ALKEQLKRTPRAFPTLKINRKVTSIDDFRFEDFEVKDYEPYGPIKMQMSV 296


>gi|56753539|gb|AAW24972.1| SJCHGC01067 protein [Schistosoma japonicum]
          Length = 317

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 129/281 (45%), Positives = 182/281 (64%), Gaps = 21/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL+LL++++  G++R DRT  GT + FG Q+RF L    +PLLTTK V ++ +V ELLWF
Sbjct: 36  YLNLLQYILAKGTERNDRTNTGTLAVFGPQLRFSLRNNEYPLLTTKTVFFRGIVEELLWF 95

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRS--------WP 102
           +RG +N   L    V  WD                ++G+LGPIYG QWR           
Sbjct: 96  IRGSTNSRELSEKNVHFWDANGSREFLDGLGFTEREEGDLGPIYGFQWRHSGAEYIDCRT 155

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ++ +++ +R  P+ RR ++ AWNV  + KMALPPCHCL QF+V NG+LSCQ
Sbjct: 156 DYTGQGVDQLADVIKLIRERPWDRRILIVAWNVKDLRKMALPPCHCLVQFFVANGELSCQ 215

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LGIPFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E    Q+ R
Sbjct: 216 LYQRSGDMGLGIPFNIASYALLTYMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKR 275

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           +PR  P++ I   + ++  F++EDF L  Y+P+  +  K++
Sbjct: 276 TPRPFPKLEIVREVENIDDFKFEDFKLIDYKPYPKLSMKMA 316


>gi|93279924|pdb|2G8D|A Chain A, Lactobacillus Casei Thymidylate Synthase Y261w-Dump
           Complex
          Length = 316

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HL+ NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLWVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|301111324|ref|XP_002904741.1| bifunctional dihydrofolate reductase-thymidylate synthase 2
           [Phytophthora infestans T30-4]
 gi|262095071|gb|EEY53123.1| bifunctional dihydrofolate reductase-thymidylate synthase 2
           [Phytophthora infestans T30-4]
          Length = 509

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 128/273 (46%), Positives = 172/273 (63%), Gaps = 23/273 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL+R ++  G+ R DRTG GT S FG QMRF L    FPLLTTK+V W+ V  ELLW
Sbjct: 208 QYLDLIRKILTQGAKREDRTGTGTLSVFGAQMRFSLRNNVFPLLTTKRVFWRGVAEELLW 267

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ GD++   L +  + IWD    ++            G+LGP+YG QWR +        
Sbjct: 268 FISGDTSAHTLQQKDIHIWDGNGSREYLDSRGLQHREVGDLGPVYGFQWRHFGAKYTDMH 327

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  LR +P  RR ++SAWN + +++MALPPCH   QFYV NG+LSC
Sbjct: 328 ADYTGKGVDQLAEVIHKLRTNPTDRRIVLSAWNPSDLNEMALPPCHMFCQFYVANGELSC 387

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT ++A V G + GEFIH +GD H+Y NH E    QL+
Sbjct: 388 QMYQRSADMGLGVPFNIASYALLTRLVAQVTGLKPGEFIHVIGDAHVYLNHVEPLQKQLT 447

Query: 222 RSPRTLPQMIINPNIV-DLLSFRYEDFT-LRSY 252
           R+P   P + INP     +  F +EDF  +  Y
Sbjct: 448 RTPCPFPTLHINPEKTSSIDEFTFEDFEWVSDY 480


>gi|1169424|sp|P45350|DRTS_DAUCA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|288615|emb|CAA78954.1| dihydrofolate reductase-thymidylate synthetase [Daucus carota]
          Length = 528

 Score =  340 bits (872), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 128/282 (45%), Positives = 170/282 (60%), Gaps = 21/282 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L+ ++I  G  + DRT  GT S FG QMRF+L K FPLLTTKKV W+ VV ELLWF+
Sbjct: 247 YLGLVENIISNGVTKNDRTRTGTVSIFGCQMRFNLRKSFPLLTTKKVFWRGVVEELLWFI 306

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G +N   L   GV+IW+                ++G+LGPIYG QWR +         D
Sbjct: 307 SGSTNAKILKEKGVNIWEGNGSREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTDMHAD 366

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++ +P  RR I SAWN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 367 YSGQGFDQLLDVISKIKNNPDDRRIIQSAWNPSDLRLMALPPCHMFAQFYVANGELSCQM 426

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSR 222
           YQRS D+ LG+PFNIA+Y+LLT M+A V     G+F+H++GD H+Y+NH     +     
Sbjct: 427 YQRSADMGLGVPFNIAAYALLTCMIAHVCDLVPGDFVHSIGDAHVYSNHLSDLFETSFRM 486

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P+T P + IN    D+ SF   DF L  Y+PH  I  K++V
Sbjct: 487 LPKTFPVLKINSGEKDIDSFEAADFKLIGYDPHQKIEMKMAV 528


>gi|93279922|pdb|2G89|A Chain A, L. Casei Thymidylate Synthase Y261a In Complex With
           Substrate, Dump
          Length = 316

 Score =  340 bits (872), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HL  NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLAVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|224103383|ref|XP_002313034.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
 gi|222849442|gb|EEE86989.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
          Length = 414

 Score =  340 bits (872), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 125/281 (44%), Positives = 165/281 (58%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L++ +I  G+ +  R G GT S FG QMRF+L K FP LTTKKV W+ VV ELLWF+
Sbjct: 134 YLRLVQDIITDGNLKDGRAGTGTLSKFGCQMRFNLRKTFPFLTTKKVFWRGVVEELLWFI 193

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------D 103
            G +N   L   G+ IWD  A +D            G+LGP YG QWR +         D
Sbjct: 194 SGSTNAKVLQEKGIHIWDGNASRDYLDSVGLKDREEGDLGPFYGFQWRHFGARYTDMHAD 253

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  +R +P  R  ++SAWN   +  M LPPCH   QFYV NG+LSCQ+
Sbjct: 254 YTGQGFDQLLDVIDKIRNNPNDRGIVLSAWNPTDLKLMVLPPCHMFVQFYVANGELSCQM 313

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PF+IASY+LLT ++A V     G+FIH +GD H+Y+ H      QL + 
Sbjct: 314 YQRSADMGLGVPFSIASYALLTHIIAHVCDLVPGDFIHVIGDAHVYHTHIRPLQEQLHKL 373

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + IN    D+ SF   DF L  Y+PH  I  K++V
Sbjct: 374 PKPFPILKINSEKKDIDSFVAADFELIGYDPHQKIEMKMAV 414


>gi|322788931|gb|EFZ14449.1| hypothetical protein SINV_05432 [Solenopsis invicta]
          Length = 302

 Score =  340 bits (872), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 139/284 (48%), Positives = 180/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L+  VIK G+ R +RTGV T S FG QMRF L  G FPLLTTK+V W++VV ELL
Sbjct: 19  YQYLRLIEKVIKTGAKRGNRTGVDTYSIFGAQMRFSLRDGVFPLLTTKRVFWRAVVEELL 78

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +N   L   G+ IWDE               ++G+LGP+YG QWR +       
Sbjct: 79  WFIKGSTNSKELTDKGIHIWDENGSRAFLDSYGFTNREEGDLGPVYGFQWRHFGAEYKDM 138

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    IDQ+  ++  ++  P  RR I+SAWN   I KMALPPCH   QFYV+NG+LS
Sbjct: 139 HTDYTRQGIDQLKEVIHKVKHSPEDRRIIMSAWNPVDIPKMALPPCHTFVQFYVNNGELS 198

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH    + Q+
Sbjct: 199 AQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEEQV 258

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I   I D+  F  EDF L  Y+P+A +  K++V
Sbjct: 259 KREPREFPKLKIVREIKDIDDFIAEDFELIDYKPYAKLYMKMAV 302


>gi|31544250|ref|NP_852828.1| thymidylate synthase [Mycoplasma gallisepticum str. R(low)]
 gi|33860236|sp|Q9XC19|TYSY_MYCGA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|31541094|gb|AAP56396.1| Thymidylate synthase [Mycoplasma gallisepticum str. R(low)]
 gi|284930289|gb|ADC30228.1| Thymidylate synthase [Mycoplasma gallisepticum str. R(high)]
 gi|284931056|gb|ADC30994.1| Thymidylate synthase [Mycoplasma gallisepticum str. F]
          Length = 289

 Score =  340 bits (872), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 144/294 (48%), Positives = 193/294 (65%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V+  G  ++DRT  GT S FG Q R+DL +GFPLLTTKK+ WK++ HELL
Sbjct: 1   MKTYLDLLEKVMTKGEVKKDRTNTGTISYFGTQSRYDLREGFPLLTTKKMAWKAICHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91
           WFL+GD+N+ YL  H V+IW+EW  +                              G+LG
Sbjct: 61  WFLKGDTNIKYLVDHNVNIWNEWPYEAFKKSNDFKGESLQDFVEKIKTDNQFAQQYGKLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +     N +DQI  ++  ++ +P+SRR IVSAWN   I +MALPPCH  FQ
Sbjct: 121 PVYGKQWRDF-----NGVDQIEWVINEIKTNPFSRRLIVSAWNPGEIKEMALPPCHSFFQ 175

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           F+V+   ++S QLYQRSGD+FLG+PFNIASYSLL +M+A V G +  EFIHT+GD H+Y+
Sbjct: 176 FFVNEKYEISLQLYQRSGDLFLGVPFNIASYSLLLLMVAQVTGLKPAEFIHTIGDTHIYS 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH EQ  +QL R P+ LP++ +NP+I ++  FR+ED +L +YE H  I  KV+V
Sbjct: 236 NHLEQVKIQLQREPKKLPKVTLNPDIKNIFDFRFEDISLENYEHHDPIKGKVAV 289


>gi|322643701|gb|EFY40253.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|323226466|gb|EGA10674.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
          Length = 231

 Score =  339 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 136/231 (58%), Positives = 177/231 (76%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+
Sbjct: 1   MRFNLQEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG QWR+WP  DG  IDQI++++  L+ DP SRR IVSAWNV  +DKMAL PCH  FQFY
Sbjct: 61  YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V +GKLSCQLYQRS DVFLG+PFNIASY+LL  M+A       G+F+ T GD HLY+NH 
Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHM 180

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           EQ  LQLSR PR LP+++I      L  +R++DF +  Y+PH  I A V++
Sbjct: 181 EQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 231


>gi|23099195|ref|NP_692661.1| thymidylate synthase [Oceanobacillus iheyensis HTE831]
 gi|33301729|sp|Q8EQG0|TYSY_OCEIH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|22777423|dbj|BAC13696.1| thymidylate synthase [Oceanobacillus iheyensis HTE831]
          Length = 317

 Score =  339 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 144/313 (46%), Positives = 187/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + + K G  R DRT  GT S FG+Q+RFDL+KGFPLLTTK+V ++ V  ELLW
Sbjct: 5   QAYLDLCKQIFKTGEQRGDRTNTGTHSIFGHQIRFDLNKGFPLLTTKRVPFRLVASELLW 64

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL +H  +IW+EWA                                     
Sbjct: 65  FIKGDTNIRYLLKHNNNIWNEWAFEKWVNSADYQGPDMANFGLRSQKDENFNKQYQEQME 124

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        DK G+LG +YG QWR+W       IDQ+  ++ S++ +P SRRHIVS
Sbjct: 125 LFKTRILEDDSFADKYGDLGSVYGKQWRNWKTTQNETIDQLKDVIHSIKTNPNSRRHIVS 184

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  MALPPCH LFQFYV NGKLSCQLYQRS DVFLG+PFNIASY+LLT ++A  
Sbjct: 185 AWNPEDIPTMALPPCHTLFQFYVSNGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHE 244

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + G+F+HT GD H+Y+NH EQ + QL R  R  PQ+IIN +   +     +D  + +
Sbjct: 245 CGLEVGDFVHTFGDAHIYSNHVEQVETQLEREIRDFPQLIINKDKNSIFEMDLDDLVIEN 304

Query: 252 YEPHAAILAKVSV 264
           Y PH +I A ++V
Sbjct: 305 YNPHPSIKAPIAV 317


>gi|302142537|emb|CBI19740.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  339 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 129/281 (45%), Positives = 169/281 (60%), Gaps = 20/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL  L+ +I  G+ + D+TG GT S FG QMRF+L   FPLLTTK+V W+ VV ELLWF+
Sbjct: 189 YLRQLKEIISSGAHKADKTGTGTVSKFGCQMRFNLRLSFPLLTTKRVFWRGVVEELLWFI 248

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP--------D 103
            G +N   L +  + IWD  A             ++G+LGPIYG QWR +         D
Sbjct: 249 SGSTNAKVLQKKDIHIWDGNASREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTNMHAD 308

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQ+  ++  ++  P  RR I+S+WN + +  MALPPCH   QFYV NG+LSCQ+
Sbjct: 309 YMGKGFDQLLDVIDKIKNKPDDRRIILSSWNPSDLKLMALPPCHMFAQFYVANGELSCQM 368

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+LLT M+A V G   G+FI  +GD H+Y  H    + QL + 
Sbjct: 369 YQRSADMGLGVPFNIASYALLTCMIAHVCGILPGDFILIIGDAHIYKTHIRPLEEQLQKL 428

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  P + INP   D+ SF   DF L  Y PH  I  K+SV
Sbjct: 429 PKPFPILKINPQKKDIESFVAADFELIGYNPHQKIEMKMSV 469


>gi|241759128|ref|ZP_04757237.1| thymidylate synthase [Neisseria flavescens SK114]
 gi|241320624|gb|EER56894.1| thymidylate synthase [Neisseria flavescens SK114]
          Length = 235

 Score =  339 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 160/231 (69%), Positives = 191/231 (82%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL+RHV+  G D+ DRTG GTRS FGYQMRFDLS+GFPLLTTKK+H +S++HELL
Sbjct: 1   MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWRSWP  DG  IDQI+++V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR IVSAWN AL+D+MALPPCH LFQFYV NGKLSCQLYQRS D+FLG+PFNIAS
Sbjct: 121 KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           Y+LLTMM+A V G   GEFIHT GD HLY+NH EQA LQLSR  R+LP M 
Sbjct: 181 YALLTMMMAQVCGLGAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRSLPAMK 231


>gi|93279923|pdb|2G8A|A Chain A, Lactobacillus Casei Y261m In Complex With Substrate, Dump
          Length = 316

 Score =  339 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HL  NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLMVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|57100565|ref|XP_533309.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Canis
           familiaris]
          Length = 325

 Score =  339 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 127/269 (47%), Positives = 167/269 (62%), Gaps = 20/269 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H++  G+ + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 33  QYLGQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 92

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGPIYG QWR +         
Sbjct: 93  IKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREEGDLGPIYGFQWRHFGAEYKDKDS 152

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+  WN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 153 DYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQ 212

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 213 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 272

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            PR  P++ I   +  +  F+ EDF +  
Sbjct: 273 EPRPFPKLRILRRVEKIDDFKAEDFQIEG 301


>gi|73961995|ref|XP_849163.1| PREDICTED: similar to Thymidylate synthase (TS) (TSase) [Canis
           familiaris]
          Length = 325

 Score =  339 bits (870), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 127/269 (47%), Positives = 167/269 (62%), Gaps = 20/269 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H++  G+ + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 33  QYLRQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 92

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGPIYG QWR +         
Sbjct: 93  IKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREEGDLGPIYGFQWRHFGAEYKDKDS 152

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+  WN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 153 DYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKDLPLMALPPCHALCQFYVVNGELSCQ 212

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 213 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 272

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            PR  P++ I   +  +  F+ EDF +  
Sbjct: 273 EPRPFPKLRILRRVEKIDDFKAEDFQIEG 301


>gi|227893421|ref|ZP_04011226.1| thymidylate synthase [Lactobacillus ultunensis DSM 16047]
 gi|227864836|gb|EEJ72257.1| thymidylate synthase [Lactobacillus ultunensis DSM 16047]
          Length = 318

 Score =  339 bits (870), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 144/313 (46%), Positives = 182/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRFDLSKGFPLLTTK+V +  +  ELLW
Sbjct: 6   QPYLDLLNKIMTEGHDKSDRTGTGTRSYFGAQMRFDLSKGFPLLTTKRVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHHNHIWDEWAFKNWVTSEEYDGPDMTDFGLRSQSDPEFNKIYQTEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W   DG  IDQI+++++ ++  P SRR IV+
Sbjct: 126 KFDQRILDDEAFAVKYGNLGDVYGAQWRHWQKRDGGFIDQIANVIKQIKETPDSRRMIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASY+LL  M+A  
Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARK 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF Q    LSR P   PQ+ +NP+   +  F  +D  +  
Sbjct: 246 TGLKVGEFVHTLGDAHIYRNHFNQVKELLSRKPYDSPQLWLNPDKKHIEDFEMQDIKVID 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YKHHGTIKAPVAV 318


>gi|254577775|ref|XP_002494874.1| ZYRO0A11704p [Zygosaccharomyces rouxii]
 gi|238937763|emb|CAR25941.1| ZYRO0A11704p [Zygosaccharomyces rouxii]
          Length = 310

 Score =  339 bits (870), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 133/290 (45%), Positives = 174/290 (60%), Gaps = 27/290 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
            QYLDL++ ++  G  R DRTG GT S F   Q+RFDLS   FPLLTTKKV  K ++ EL
Sbjct: 21  QQYLDLIQRILDEGEFRPDRTGTGTYSIFAPPQLRFDLSNDRFPLLTTKKVFTKGIILEL 80

Query: 60  LWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+                ++G+LGP+YG QWR +      
Sbjct: 81  LWFISGCTDGKKLSEQGVKIWEGNGSREYLDKIGLHDRREGDLGPVYGFQWRHFGAKYRT 140

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ+  ++  L+ +PY RR I+SAWN      MALPPCH   QFYV     
Sbjct: 141 CDDDYTGQGFDQLHEVIHKLKNNPYDRRIIMSAWNPPDFPLMALPPCHVFSQFYVSFPKE 200

Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
              KLSC LYQRS D+ LG+PFNIASYSLLT M+A V   + GEFIHT+GD H+Y +H +
Sbjct: 201 GKPKLSCLLYQRSCDMGLGVPFNIASYSLLTKMIAHVCDMEPGEFIHTMGDAHIYKDHID 260

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               QLSR+P+  PQ+ I   + ++ +F+YEDF + +Y PH  I   +SV
Sbjct: 261 ALKEQLSRTPKDFPQLKIARKMDNIDNFKYEDFKIENYHPHGRIQMNMSV 310


>gi|6729893|pdb|1BPJ|A Chain A, Thymidylate Synthase R178t, R179t Double Mutant
          Length = 316

 Score =  339 bits (870), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 144/313 (46%), Positives = 185/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYS   IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSTTLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|227513328|ref|ZP_03943377.1| thymidylate synthase [Lactobacillus buchneri ATCC 11577]
 gi|227083201|gb|EEI18513.1| thymidylate synthase [Lactobacillus buchneri ATCC 11577]
          Length = 317

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 147/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L ++V++ G  + DRT  GT STFGYQMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 7   YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 67  RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYIGPDMTNFSHRAQEDPDFNDLYQEQKKRF 126

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IVSAW
Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV++GKLSCQLYQRSGD+FLG+PFNIASY+LLT ++A    
Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGVPFNIASYALLTSLIARECN 246

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEF+HTLGD H+Y NH +Q   QLSR P   PQ+ +NP    L  F   D  +++Y+
Sbjct: 247 LQPGEFVHTLGDAHIYLNHVKQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306

Query: 254 PHAAILAKVSV 264
           P+ +I A V+V
Sbjct: 307 PYPSIKAPVAV 317


>gi|329766967|ref|ZP_08258495.1| thymidylate synthase [Gemella haemolysans M341]
 gi|328837692|gb|EGF87317.1| thymidylate synthase [Gemella haemolysans M341]
          Length = 310

 Score =  339 bits (869), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 143/313 (45%), Positives = 200/313 (63%), Gaps = 56/313 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            +YL L +H++  G ++ DRTGVGT+S FGYQM+FDLS+GFPLLTTKKV++  V  ELLW
Sbjct: 4   KEYLKLCQHILDNGIEKEDRTGVGTKSVFGYQMKFDLSEGFPLLTTKKVNFNLVWSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ +L  +  +IW+EW                                      
Sbjct: 64  FIKGDTNIKFLLENKNNIWNEWAFKKWIESEKYTGPDMTDFGHRTLVDEEFSKQYKEQMA 123

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       ++K G+LG +YG QWR++     N IDQ+ ++V+ ++ +P SRR IVS
Sbjct: 124 IFKERVLTDESFSEKYGDLGNVYGKQWRNF-----NGIDQLKNVVEQIKTNPSSRRLIVS 178

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           +WN A +D MALPPCH LFQFYV++GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A  
Sbjct: 179 SWNPAEVDTMALPPCHSLFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKE 238

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q   Q+SR+P +LP++ +N +   +   + ED  + +
Sbjct: 239 CGLEVGEFVHTLGDAHIYKNHFDQVKEQMSRTPYSLPELKVN-DFESIFDLKIEDVEVVN 297

Query: 252 YEPHAAILAKVSV 264
           YE H  I A ++V
Sbjct: 298 YESHPFIKAPIAV 310


>gi|6980894|pdb|1BP0|A Chain A, Thymidylate Synthase R23i Mutant
          Length = 316

 Score =  339 bits (869), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 186/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + D T  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDITHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|227524472|ref|ZP_03954521.1| thymidylate synthase [Lactobacillus hilgardii ATCC 8290]
 gi|227088342|gb|EEI23654.1| thymidylate synthase [Lactobacillus hilgardii ATCC 8290]
          Length = 317

 Score =  339 bits (869), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 148/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L ++V++ G  + DRT  GT STFGYQMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 7   YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 67  RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYIGPDMTNFSHRAQENPDFNDLYQEQKKRF 126

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IVSAW
Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV++GKLSCQLYQRSGD+FLGIPFNIASY+LLT ++A    
Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGIPFNIASYALLTSLIARECN 246

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEF+HTLGD H+Y NH +Q   QLSR P   PQ+ +NP    L  F   D  +++Y+
Sbjct: 247 LQPGEFVHTLGDAHIYLNHVKQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306

Query: 254 PHAAILAKVSV 264
           P+ +I A V+V
Sbjct: 307 PYPSIKAPVAV 317


>gi|213428469|ref|ZP_03361219.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
          Length = 231

 Score =  339 bits (869), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 136/231 (58%), Positives = 177/231 (76%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+
Sbjct: 1   MRFNLLEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG QWR+WP  DG  IDQI++++  L+ DP SRR IVSAWNV  +DKMAL PCH  FQFY
Sbjct: 61  YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFY 120

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V +GKLSCQLYQRS DVFLG+PFNIASY+LL  M+A       G+F+ T GD HLY+NH 
Sbjct: 121 VADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHM 180

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           EQ  LQLSR PR LP+++I      L  +R++DF +  Y+PH  I A V++
Sbjct: 181 EQTHLQLSREPRALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 231


>gi|293380554|ref|ZP_06626614.1| thymidylate synthase [Lactobacillus crispatus 214-1]
 gi|290922892|gb|EFD99834.1| thymidylate synthase [Lactobacillus crispatus 214-1]
          Length = 318

 Score =  338 bits (868), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 181/313 (57%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV +  +  ELLW
Sbjct: 6   QPYLDLLEKIMTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L  H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLEHNNYIWDEWAFKNWIESAEYQGADMTDFGLRSQSDPEFNQVYQAEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G LG +YG QWR W    G  IDQI+ +++ ++  P SRR IV+
Sbjct: 126 KFDQRILDDPAFAQKYGNLGDVYGAQWRHWKKRTGGFIDQIADVIKQIKETPDSRRMIVT 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  M+A  
Sbjct: 186 AWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF Q    LSR+P   P++ +NP    +  F  +D  + +
Sbjct: 246 TGLKVGEFVHTLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLN 305

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A V+V
Sbjct: 306 YQHHGTIKAPVAV 318


>gi|71894413|ref|YP_278521.1| thymidylate synthase [Mycoplasma synoviae 53]
 gi|123747941|sp|Q4A611|TYSY_MYCS5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|71851201|gb|AAZ43810.1| thymidylate synthase [Mycoplasma synoviae 53]
          Length = 289

 Score =  338 bits (868), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 150/294 (51%), Positives = 194/294 (65%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL H+   G+ ++DRT +GT S FG Q R++L +GFPLLTTKK+ WK++ HELL
Sbjct: 1   MKQYLHLLEHIKTSGTFKKDRTNIGTISLFGLQARYNLKEGFPLLTTKKMAWKAICHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91
           WFL+GD+N+ YL  + V+IW+EW                               K GELG
Sbjct: 61  WFLKGDTNIKYLVDNNVNIWNEWPYEIFKKSNDYQGESLKEFSQKIKEDSSFAQKYGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +       +DQIS ++  ++ +P SRR IVSAWNVA IDKMALPPCH  FQ
Sbjct: 121 PVYGKQWRDFF-----GVDQISQVINDIKNNPTSRRLIVSAWNVAQIDKMALPPCHAFFQ 175

Query: 152 FYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           FYV DN +LS  LYQRSGD+FLG+PFNIASYSLL  M+A V   + GEFIHT+GD H+Y+
Sbjct: 176 FYVNDNNELSLHLYQRSGDMFLGVPFNIASYSLLLSMVAQVTNLKVGEFIHTIGDAHIYS 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH +Q + QL R+P  LP++I+N NI ++  F +ED  L +Y  H  I AKV+V
Sbjct: 236 NHIDQVNTQLERAPYKLPKLILNKNIKNIFDFTFEDIELENYISHETIKAKVAV 289


>gi|68482174|ref|XP_714971.1| hypothetical protein CaO19.11033 [Candida albicans SC5314]
 gi|68482301|ref|XP_714908.1| hypothetical protein CaO19.3549 [Candida albicans SC5314]
 gi|1174838|sp|P12461|TYSY_CANAL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|7537304|gb|AAA34374.2| thymidylate synthase precursor [Candida albicans]
 gi|46436507|gb|EAK95868.1| hypothetical protein CaO19.3549 [Candida albicans SC5314]
 gi|46436572|gb|EAK95932.1| hypothetical protein CaO19.11033 [Candida albicans SC5314]
 gi|238882292|gb|EEQ45930.1| thymidylate synthase [Candida albicans WO-1]
          Length = 315

 Score =  338 bits (868), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 133/306 (43%), Positives = 174/306 (56%), Gaps = 43/306 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
             YLDL + +I  G  R DRTG GT+S F   Q+RFDLS   FPLLTTKKV  K ++HEL
Sbjct: 10  QAYLDLCKRIIDEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+                ++G+LGP+YG QWR +      
Sbjct: 70  LWFVAGSTDAKILSEKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKD 129

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ+  +++ L+ +PY RR I+SAWN     KMALPPCH   QFYV+    
Sbjct: 130 CDSDYTGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPTS 189

Query: 156 -------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
                          KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+    GEFIHT
Sbjct: 190 SPDPNNPKQAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHT 249

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMII----NPNIVDLLSFRYEDFTLRSYEPHAAI 258
           LGD H+Y +H +    Q  R P+  P+++I       I  +  F++EDF +  YEP+  I
Sbjct: 250 LGDAHVYLDHIDALKEQFERIPKQFPKLVIKEERKNEIKSIDDFKFEDFEIVGYEPYPPI 309

Query: 259 LAKVSV 264
             K+SV
Sbjct: 310 KMKMSV 315


>gi|27904867|ref|NP_777993.1| thymidylate synthase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29428168|sp|P59427|TYSY_BUCBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|27904265|gb|AAO27098.1| thymidylate synthase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 264

 Score =  338 bits (867), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 146/264 (55%), Positives = 193/264 (73%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL LL+ ++K GS+R+DRTG+GT S FGY M F+L  GFPL+TTKK H+ ++VHELL
Sbjct: 1   MKSYLVLLKKILKEGSNRKDRTGIGTLSVFGYHMEFNLKLGFPLITTKKCHFPAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL+ H +SIW+ WAD+ G LGPIYG QWRSW   DG VIDQI +++  ++
Sbjct: 61  WFLKGDTNIKYLNDHNISIWNPWADERGYLGPIYGEQWRSWKTKDGRVIDQIDNVIHLIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  + KMAL PCH LFQF+V +  L CQLYQRS DVFLG+PFNIAS
Sbjct: 121 NNPNSRRIVVSSWNVGDLHKMALLPCHVLFQFHVVDHVLHCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           YSLLT M+A     + G FI T GDVHLY NH +QA  Q+ R P  LP+++IN     + 
Sbjct: 181 YSLLTHMIAQQCNLKVGNFIWTGGDVHLYKNHIKQAKKQILRRPYLLPKLVINRKPTQIF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           ++  +DF L +Y+ H +I AK+++
Sbjct: 241 NYLLQDFNLLNYKYHPSIHAKIAI 264


>gi|294878205|ref|XP_002768310.1| dihydrofolate reductase-thymidylate synthase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239870558|gb|EER01028.1| dihydrofolate reductase-thymidylate synthase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 492

 Score =  338 bits (867), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 129/286 (45%), Positives = 175/286 (61%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           ++YL L+  +I+ G D  DRTGVGT++ F   MRF L  G FPLLTTK+V W+ VV ELL
Sbjct: 207 YEYLRLIEEIIENGEDADDRTGVGTKTIFSCHMRFSLRDGVFPLLTTKRVFWRGVVEELL 266

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWPDY---- 104
           WF+RGD+N  +L   GV IWD                ++G+LGP+YG QWR +       
Sbjct: 267 WFIRGDTNAKHLSDQGVKIWDLNGTREFLDGRGLTHREEGDLGPVYGFQWRHFGADYVDM 326

Query: 105 -----DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGK 158
                    +DQ++ +++ L+ +P  RR I++AWN   +  MALPPCH + QFYV+   +
Sbjct: 327 HADYSKSGGVDQLAEVIRQLKENPMDRRIIMTAWNPTALPLMALPPCHMMCQFYVNSKQE 386

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC +YQRS D+ LG+PFNIASY+LLT MLA V G + GEF H LG+ H+YNNH E    
Sbjct: 387 LSCAMYQRSADMGLGVPFNIASYALLTCMLAQVCGLKPGEFCHHLGNTHVYNNHIEPLRQ 446

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R+PR  P + INPN+  +   +  DF L  Y P   I  +++V
Sbjct: 447 QLKRTPRPFPLLKINPNVKTIDDIKSSDFELIGYNPWGKIAMEMAV 492


>gi|227510321|ref|ZP_03940370.1| thymidylate synthase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227189973|gb|EEI70040.1| thymidylate synthase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 317

 Score =  338 bits (867), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 148/311 (47%), Positives = 188/311 (60%), Gaps = 50/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L ++V++ G  + DRT  GT STFGYQMRFDLSKGFPLLTTKKV +  +  ELLWFL
Sbjct: 7   YLNLEKYVLENGHKKPDRTHTGTISTFGYQMRFDLSKGFPLLTTKKVPFGLIKSELLWFL 66

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           RGD+N+ +L +H   IWDEWA                                       
Sbjct: 67  RGDTNIKFLLQHKNHIWDEWAFEKYVKSNDYTGPDMTNFSHRAQEDPDFNNLYQEQKKRF 126

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W    G  IDQI +++  ++  P SRR IVSAW
Sbjct: 127 CQLVLDDDTFAQKYGDLGLVYGSQWRAWKTSTGETIDQIQNVIDMIKTHPDSRRLIVSAW 186

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   +  MALPPCH +FQFYV++GKLSCQLYQRSGD+FLG+PFNIASY+LLT ++A    
Sbjct: 187 NPEDVPTMALPPCHTMFQFYVNDGKLSCQLYQRSGDIFLGVPFNIASYALLTSLIARECH 246

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            Q GEF+HTLGD H+Y NH EQ   QLSR P   PQ+ +NP    L  F   D  +++Y+
Sbjct: 247 LQPGEFVHTLGDAHIYLNHVEQVKEQLSRKPHDAPQLWLNPEKKHLSDFNMTDIKVKNYD 306

Query: 254 PHAAILAKVSV 264
           P+ +I A V+V
Sbjct: 307 PYPSIKAPVAV 317


>gi|254460113|ref|ZP_05073529.1| thymidylate synthase [Rhodobacterales bacterium HTCC2083]
 gi|206676702|gb|EDZ41189.1| thymidylate synthase [Rhodobacteraceae bacterium HTCC2083]
          Length = 250

 Score =  338 bits (867), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 140/247 (56%), Positives = 180/247 (72%), Gaps = 1/247 (0%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVS 78
            DRTG GT S FG Q R+ ++ GFPL+TTKK+H KS++HELLWFL GD+N+ YL  +GVS
Sbjct: 4   TDRTGTGTTSHFGLQCRYPMADGFPLVTTKKLHLKSIIHELLWFLAGDTNIKYLKDNGVS 63

Query: 79  IWDEWADKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           IWDEWAD++G+LGP+YG QWR WP   D   IDQI+ +V++++  P SRR IVSAWN A 
Sbjct: 64  IWDEWADENGDLGPVYGSQWRRWPSGTDMGPIDQITDLVEAIKKTPDSRRLIVSAWNPAE 123

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           +  MALPPCH L+Q  +  GKL  QLYQRS D+FLG+PFNIASY+LL  MLA V G + G
Sbjct: 124 VPDMALPPCHTLWQVRIAGGKLHLQLYQRSADMFLGVPFNIASYALLLHMLAHVTGHEPG 183

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           +FIH++GD H+Y+NH EQ   QL+RSP+ L Q+ I   +  L  F Y+DF +  Y+P A 
Sbjct: 184 DFIHSIGDAHIYSNHMEQVQTQLARSPKALSQLKIKRQVSSLFDFTYDDFEIIGYDPDAG 243

Query: 258 ILAKVSV 264
           I A V+V
Sbjct: 244 IKAPVAV 250


>gi|222615976|gb|EEE52108.1| hypothetical protein OsJ_33908 [Oryza sativa Japonica Group]
          Length = 574

 Score =  338 bits (866), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 125/273 (45%), Positives = 168/273 (61%), Gaps = 20/273 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL+L+  +I+ G+ + DRTG GT S FG QMRF+L   FPLLTTKKV W+ VV ELLW
Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F+ G ++   L   G+ IWD                ++G+LGP+YG QWR +        
Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMH 358

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  ++ +P  RR I+SAWN + + KMALPPCH   QFYV++G+LSC
Sbjct: 359 ADYTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVESGELSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT M+A V G   GEF+H +GD H+Y  H    + Q+ 
Sbjct: 419 QMYQRSADMGLGVPFNIASYSLLTYMIAHVCGLSPGEFVHVIGDAHVYRTHVRALEEQIQ 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
           + P+  P + INP   D+ SF   DF L    P
Sbjct: 479 KLPKPFPVLKINPLKKDIDSFVASDFKLVGLSP 511



 Score = 85.7 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 33/61 (54%)

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
            ++G   GEF+H +GD H+Y  H    + Q+ + P+  P + INP   D+ SF   DF L
Sbjct: 505 KLVGLSPGEFVHVIGDAHVYRTHVRALEEQIQKLPKPFPVLKINPLKKDIDSFVASDFKL 564

Query: 250 R 250
            
Sbjct: 565 V 565


>gi|22001023|gb|AAM82248.1| dihydrofolate reductase/thymidylate synthase [Leishmania infantum]
 gi|321398942|emb|CAM65520.2| dihydrofolate reductase-thymidylate synthase [Leishmania infantum
           JPCM5]
          Length = 520

 Score =  338 bits (866), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 128/286 (44%), Positives = 170/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI SIV++++A+P  RR + +AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH      
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH  I  +++V
Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520


>gi|295426056|ref|ZP_06818726.1| thymidylate synthase [Lactobacillus amylolyticus DSM 11664]
 gi|295064225|gb|EFG55163.1| thymidylate synthase [Lactobacillus amylolyticus DSM 11664]
          Length = 319

 Score =  338 bits (866), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 146/314 (46%), Positives = 185/314 (58%), Gaps = 51/314 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTG GT+S FG QMRFDLSKGFPLLTTK+V +  +  ELLW
Sbjct: 6   QPYLDLLQKIMTEGHDKSDRTGTGTKSLFGAQMRFDLSKGFPLLTTKRVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L +H   IWDEWA K+                                  
Sbjct: 66  FLRGDTNIRFLLQHKNHIWDEWAFKNWVNSDEYQGPDMTDFGLRCQSDPDFNKIYQEEMK 125

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNV-IDQISSIVQSLRADPYSRRHIV 130
                           G LG +YG QWR W   DGN  IDQI ++++ ++  P SRR IV
Sbjct: 126 RFDQRILDDEDFAKKYGNLGDVYGAQWRHWEKRDGNGFIDQIHNVIEQIKHTPDSRRMIV 185

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           +AWN   +   ALPPCH +FQFY+ +GKLS QLYQRSGD+FLG+PFNIASYSLL  M+A 
Sbjct: 186 TAWNPEDVPNSALPPCHVMFQFYIADGKLSVQLYQRSGDMFLGVPFNIASYSLLLNMIAR 245

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G + GEFIHTLGD H+Y NHF+Q +  LSR P   PQ+ +NP+   +  F   D  + 
Sbjct: 246 ETGLEVGEFIHTLGDAHIYRNHFKQVEELLSRKPYDSPQLWLNPDKKKIEDFEMSDIKVL 305

Query: 251 SYEPHAAILAKVSV 264
            Y+ H  I A V+V
Sbjct: 306 DYKHHDTIKAPVAV 319


>gi|322496602|emb|CBZ31672.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 520

 Score =  337 bits (865), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 128/286 (44%), Positives = 170/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI SIV++++A+P  RR + +AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH      
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH  I  +++V
Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520


>gi|22121984|gb|AAM88576.1| dhfr-ts [Leishmania chagasi]
          Length = 520

 Score =  337 bits (865), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 128/286 (44%), Positives = 170/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI SIV++++A+P  RR + +AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH      
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH  I  +++V
Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 520


>gi|241951452|ref|XP_002418448.1| thymidylate synthase, putative [Candida dubliniensis CD36]
 gi|223641787|emb|CAX43749.1| thymidylate synthase, putative [Candida dubliniensis CD36]
          Length = 315

 Score =  337 bits (865), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 133/306 (43%), Positives = 174/306 (56%), Gaps = 43/306 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
             YLDL + +I  G  R DRTG GT+S F   Q+RFDLS   FPLLTTKKV  K ++HEL
Sbjct: 10  QAYLDLCKKIIDEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+                ++G+LGP+YG QWR +      
Sbjct: 70  LWFVAGSTDAKILSEKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKD 129

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ+  +++ L+ +PY RR I+SAWN     KMALPPCH   QFYV+    
Sbjct: 130 CDSDYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPTS 189

Query: 156 -------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
                          KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+    GEFIHT
Sbjct: 190 QPDSNNPKQAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHT 249

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINP----NIVDLLSFRYEDFTLRSYEPHAAI 258
           LGD H+Y +H +    Q  R P+  P+++I       I  +  F++EDF +  YEP+  I
Sbjct: 250 LGDAHVYLDHIDALKEQFERIPKQFPKLVIKEERKAEIKSIDDFKFEDFEIIGYEPYPPI 309

Query: 259 LAKVSV 264
             K+SV
Sbjct: 310 KMKMSV 315


>gi|84996883|ref|XP_953163.1| bifunctional dihydrofolate reductase/thymidilate synthase
           [Theileria annulata strain Ankara]
 gi|65304159|emb|CAI76538.1| bifunctional dihydrofolate reductase/thymidilate synthase, putative
           [Theileria annulata]
          Length = 523

 Score =  337 bits (865), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 123/281 (43%), Positives = 179/281 (63%), Gaps = 20/281 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL++L  ++  G  +++RTGV   + FGYQMRFDLS+ FPLLTTKKV  + ++ EL+WF
Sbjct: 242 QYLEILADILNNGYHKKNRTGVDCIAKFGYQMRFDLSQSFPLLTTKKVFLRGIIEELIWF 301

Query: 63  LRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP-------- 102
           +RG +N + L +  V IW+             +  ++ +LGP+YG QWR +         
Sbjct: 302 IRGSTNGNELLKKNVRIWELNGARSFLDNLGFYDREEQDLGPVYGFQWRHFGAKYIDMHA 361

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY    IDQ+S +++ ++ +P +RR IV +WNVA + KMALPPCH LFQF+V +G LSC 
Sbjct: 362 DYTDQGIDQLSLVIERIKNNPDNRRLIVCSWNVADLSKMALPPCHLLFQFFVADGTLSCM 421

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYSLLT M+A + G + GEF+H LGD H+YNNH +    Q+SR
Sbjct: 422 MHQRSCDMGLGVPFNIASYSLLTYMIAHICGLKPGEFVHNLGDAHIYNNHIDAIKEQISR 481

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            P   P + +N  I  +  F  +D  + +Y  H  I  +++
Sbjct: 482 VPYPFPTLKLNKEITRIEDFTIDDIKVENYRCHPLIKMEMA 522


>gi|294155965|ref|YP_003560349.1| thymidylate synthase [Mycoplasma crocodyli MP145]
 gi|291599860|gb|ADE19356.1| thymidylate synthase [Mycoplasma crocodyli MP145]
          Length = 289

 Score =  337 bits (865), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 149/294 (50%), Positives = 189/294 (64%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL LL+ V+  G  RRDRTG GT   FG Q R+DL KGFPLLTTKK+ WKS+V ELL
Sbjct: 1   MTQYLKLLKTVLNTGMVRRDRTGTGTIGVFGTQTRYDLRKGFPLLTTKKMAWKSIVVELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91
           WFL+G++N+ YL    V+IW+EW                               K G LG
Sbjct: 61  WFLKGETNIKYLVDRNVNIWNEWPYEIYKRSTDFQGETIEEFINKIKNDNEFAIKHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +     N +DQI  ++  LR  P+SRR +VSAWN   +DKMALPPCH LFQ
Sbjct: 121 PVYGRQWRDF-----NGVDQIKYVINELRTKPFSRRILVSAWNPEEVDKMALPPCHALFQ 175

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           FYV  N +LS QLYQRSGD+FLG+PFNIASY+LL  M+A V   + GEFIHT+GD H+Y+
Sbjct: 176 FYVSSNDELSLQLYQRSGDLFLGVPFNIASYALLLHMVAQVTNLRVGEFIHTIGDAHIYS 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH +Q   QL+R P  LP +I+N  + ++  F +ED  L+ Y+ H+ I A+VSV
Sbjct: 236 NHVDQVTEQLTRRPFKLPTIILNKKVKEIFDFEFEDIELKDYKSHSRIKAEVSV 289


>gi|300120673|emb|CBK20227.2| Thymidylate synthase [Blastocystis hominis]
          Length = 495

 Score =  337 bits (865), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 179/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYL+L+R+++  G+ R DRT  GTRS FG QMRF L+ G  PLLTTKKV W+ +V ELLW
Sbjct: 203 QYLNLIRYILDHGALRTDRTNTGTRSVFGTQMRFLLANGVIPLLTTKKVFWRGIVEELLW 262

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F+RG ++   L    + IWD               +++ +LGPIYG QWR +        
Sbjct: 263 FIRGCTDGRVLKEKNIHIWDGNGTRSFLDSVGLTQNEEDDLGPIYGFQWRHFGAAYEGRD 322

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    +DQ+  ++  L+ DPY+RR I+SAWN A + KMALPPCH + QFYV NG LSC
Sbjct: 323 KDYSNQGVDQLKEVIHLLKTDPYNRRIILSAWNPADLRKMALPPCHVMSQFYVQNGYLSC 382

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASYSLLT++LA + G + GEF+H++GD H+Y NH E    Q+ 
Sbjct: 383 QMYQRSADMGLGVPFNIASYSLLTILLAHITGLKPGEFVHSIGDTHVYVNHEEALLQQIE 442

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P + I     ++  + + DF L  Y PH  +  K+++
Sbjct: 443 REPRPFPTLRITKQSENIEEYTFADFELVGYNPHETLKMKMAI 485


>gi|298694721|gb|ADI97943.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED133]
          Length = 318

 Score =  337 bits (864), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYNEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVGYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|126730946|ref|ZP_01746755.1| thymidylate synthase [Sagittula stellata E-37]
 gi|126708662|gb|EBA07719.1| thymidylate synthase [Sagittula stellata E-37]
          Length = 263

 Score =  336 bits (863), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 154/264 (58%), Positives = 195/264 (73%), Gaps = 1/264 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD LR V+K G+D  DRTG GTRS FG Q R+ L+ GFPL+TTKK+H +S+VHELL
Sbjct: 1   MQQYLDALRTVLKEGTDTTDRTGTGTRSHFGLQCRYPLADGFPLVTTKKLHLRSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWR WP   G  IDQI++++  +R
Sbjct: 61  WFLSGDTNIGYLKDNGVSIWDEWADENGDLGPVYGHQWRHWPSRKGE-IDQIATLLDMIR 119

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             P SRR IVSAWN A +  MALPPCH L+Q  +  GKL  QLYQRS D+FLG+PFNIAS
Sbjct: 120 TAPDSRRLIVSAWNPADVPDMALPPCHTLWQVRIAGGKLHLQLYQRSADMFLGVPFNIAS 179

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A V G++ G+FIHT+GD H+Y+NH +Q  LQLSR+PR LP +     + DL 
Sbjct: 180 YALLQHMIAHVTGYEPGDFIHTMGDAHIYSNHMDQVALQLSRTPRPLPTLRFTREVTDLF 239

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            FRY+DF   +Y+P   I A V+V
Sbjct: 240 DFRYDDFAFDNYDPAPGIKAPVAV 263


>gi|329667138|gb|AEB93086.1| thymidylate synthase [Lactobacillus johnsonii DPC 6026]
          Length = 318

 Score =  336 bits (863), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 180/313 (57%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ +  +  ELLW
Sbjct: 6   QPYLDLLSKIMNEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L  H   IWDEWA                                     
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVESSEYQGPDMTNFGLRSQEDPEFKKIYQEEME 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVS
Sbjct: 126 KFDQKVLADQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL  ++A  
Sbjct: 186 AWNPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLIARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHTLGD H+Y NHF Q    L+RS    P + +NP+   +  F  +D  L +
Sbjct: 246 TGLKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLIN 305

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 306 YRHHGTIKAPVAV 318


>gi|283470641|emb|CAQ49852.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ST398]
          Length = 318

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLELGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|302333040|gb|ADL23233.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 318

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDNTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|71028992|ref|XP_764139.1| dihydrofolate reductase-thymidylate synthase [Theileria parva
           strain Muguga]
 gi|68351093|gb|EAN31856.1| dihydrofolate reductase-thymidylate synthase, putative [Theileria
           parva]
          Length = 522

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 122/281 (43%), Positives = 179/281 (63%), Gaps = 20/281 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL++L  ++  G  +++RTGV   + FGYQMRFDLS+ FPLLTTKKV  + ++ EL+WF
Sbjct: 241 QYLEILADILNTGYHKKNRTGVDCIAKFGYQMRFDLSESFPLLTTKKVFLRGIIEELIWF 300

Query: 63  LRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP-------- 102
           ++G +N + L +  V IW+             +  ++ +LGP+YG QWR +         
Sbjct: 301 IKGSTNGNELLKKNVRIWELNGARSFLDNLGFFDREEHDLGPVYGFQWRHFGAKYVDMHT 360

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY    IDQ+S ++  ++ +P +RR IV +WNVA + KMALPPCH LFQF+V +G LSC 
Sbjct: 361 DYSNQGIDQLSLVIDRIKNNPDNRRLIVCSWNVADLSKMALPPCHLLFQFFVADGTLSCM 420

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYSLLT M+A + G + GEF+H LGD H+YNNH +    Q+SR
Sbjct: 421 MHQRSCDMGLGVPFNIASYSLLTYMIAQICGLKPGEFVHNLGDAHIYNNHIDAIKEQISR 480

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            P   P + +N +I  +  F  +D  + +Y  H  I  +++
Sbjct: 481 VPYPFPTLRLNKDITRIEDFTIDDIKVENYRSHPVIKMEMA 521


>gi|282916694|ref|ZP_06324452.1| thymidylate synthase [Staphylococcus aureus subsp. aureus D139]
 gi|283770498|ref|ZP_06343390.1| thymidylate synthase [Staphylococcus aureus subsp. aureus H19]
 gi|282319181|gb|EFB49533.1| thymidylate synthase [Staphylococcus aureus subsp. aureus D139]
 gi|283460645|gb|EFC07735.1| thymidylate synthase [Staphylococcus aureus subsp. aureus H19]
          Length = 318

 Score =  336 bits (862), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 141/311 (45%), Positives = 187/311 (60%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  + +YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVNYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|213409892|ref|XP_002175716.1| thymidylate synthase [Schizosaccharomyces japonicus yFS275]
 gi|212003763|gb|EEB09423.1| thymidylate synthase [Schizosaccharomyces japonicus yFS275]
          Length = 619

 Score =  336 bits (862), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 130/295 (44%), Positives = 172/295 (58%), Gaps = 32/295 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKGF-PLLTTKKVHWKSVVHEL 59
            QYLDL++ +++ G  R DRTG GTRS F   Q+RF LS    PLLTTKKV  + V+ EL
Sbjct: 325 QQYLDLIKRILETGELRNDRTGTGTRSIFAPPQLRFSLSNNTLPLLTTKKVFLRGVLQEL 384

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWFLRGD+N  +L    + IWD    ++            G+LGP+YG QWR +      
Sbjct: 385 LWFLRGDTNAKHLTEKDIHIWDGNGSREFLDKMGFFDRAEGDLGPVYGFQWRHFGAKYTD 444

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ++ +V  L+ +P  RR I+SAWN A I +MALPPCH L QFYV     
Sbjct: 445 CNADYTGQGVDQLAQVVHQLKNNPNDRRIIMSAWNPAAIPQMALPPCHLLCQFYVSAPAQ 504

Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                +LSC +YQRS D+ LG+PFNIASYSLLT MLA    ++  EFIH +GD H+Y +H
Sbjct: 505 PGGRPRLSCMMYQRSADMGLGVPFNIASYSLLTHMLAHYCNYEAHEFIHVMGDCHIYIDH 564

Query: 213 FEQADLQLSRSPRTLPQMIIN---PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL+R P   P++        +  +  + Y+DF +  Y P   I  K+SV
Sbjct: 565 IEALRTQLARKPLPFPKIHFRRSPREVGSIDGYEYDDFVVEGYNPWGPIKMKMSV 619


>gi|283481329|emb|CAZ69445.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Emiliania huxleyi virus 99B1]
          Length = 480

 Score =  336 bits (862), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 125/282 (44%), Positives = 169/282 (59%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL L+  V++ G  R DRTG GT S FG  MRF+LS  FPLLTTK+ +WK +V ELLW
Sbjct: 198 YQYLQLISKVLEHGEYRSDRTGTGTVSLFGETMRFNLSTHFPLLTTKRTYWKGIVEELLW 257

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F+RG +N + L    V IWD               +++G+LGP+YG QWR +        
Sbjct: 258 FIRGSTNANELAAKNVKIWDGNGSRDFLDSVGLVDNEEGDLGPVYGFQWRHFGADYKTMH 317

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             YD    DQ+ +++  ++ +P SRR I+SAWN   ++KMALPPCH + QFYV +G LSC
Sbjct: 318 DSYDSQGTDQLQNVIDQIKNNPTSRRIIMSAWNPNALEKMALPPCHIMCQFYVHDGMLSC 377

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT ++A     + GEFIH +GD H+Y NH +    QL 
Sbjct: 378 QMYQRSADIGLGVPFNIASYALLTCLIAHFTNLKPGEFIHVIGDAHVYTNHIDALKTQLK 437

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + IN     +     +D  L  Y+ H  I   +S
Sbjct: 438 RKPYDFPTIHINNMPKTIFDVTSDDIILNDYKCHPKIHMDMS 479


>gi|73852583|ref|YP_293867.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Emiliania huxleyi virus 86]
 gi|72415299|emb|CAI65536.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Emiliania huxleyi virus 86]
          Length = 480

 Score =  336 bits (862), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 125/282 (44%), Positives = 169/282 (59%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL L+  V++ G  R DRTG GT S FG  MRF+LS  FPLLTTK+ +WK +V ELLW
Sbjct: 198 YQYLQLISKVLEHGEYRSDRTGTGTVSLFGETMRFNLSTHFPLLTTKRTYWKGIVEELLW 257

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------- 102
           F+RG +N + L    V IWD               +++G+LGP+YG QWR +        
Sbjct: 258 FIRGSTNANELAAKNVKIWDGNGSRDFLDSVGLVDNEEGDLGPVYGFQWRHFGADYKTMH 317

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             YD    DQ+ +++  ++ +P SRR I+SAWN   ++KMALPPCH + QFYV +G LSC
Sbjct: 318 DSYDSQGTDQLQNVIDQIKNNPTSRRIIMSAWNPNALEKMALPPCHLMCQFYVHDGMLSC 377

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIASY+LLT ++A     + GEFIH +GD H+Y NH +    QL 
Sbjct: 378 QMYQRSADIGLGVPFNIASYALLTCLIAHFTNLKPGEFIHVIGDAHVYTNHIDALKTQLK 437

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + IN     +     +D  L  Y+ H  I   +S
Sbjct: 438 RKPYDFPTIHINNMPKTIFDVTSDDIILNDYKCHPKIHMDMS 479


>gi|255724850|ref|XP_002547354.1| thymidylate synthase [Candida tropicalis MYA-3404]
 gi|240135245|gb|EER34799.1| thymidylate synthase [Candida tropicalis MYA-3404]
          Length = 303

 Score =  336 bits (862), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 31/294 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
             YLDL   +IK G  R DRTG GT+S F   Q+RFDLS   FPLLTTKKV  K ++HEL
Sbjct: 10  QAYLDLCERIIKEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSKGIIHEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+                ++G+LGP+YG QWR +      
Sbjct: 70  LWFIAGSTDAKILTNKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKD 129

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ+  I++ L+ +PY RR I+SAWN    DKMALPPCH   QFYV+    
Sbjct: 130 CDADYTGQGYDQLQDIIKKLKTNPYDRRIIMSAWNPPDFDKMALPPCHVFCQFYVNFPEN 189

Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
              KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+    GEFIHT+GD H+Y +H +
Sbjct: 190 AKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTMGDAHVYLDHVD 249

Query: 215 QADLQLSRSPRTLPQMIINPN----IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               QL R P+  P+++I  +    I  +  F +EDF +  YEP+  I  K+SV
Sbjct: 250 ALKEQLERIPKQFPKLVIKEDRKDEIKSIDDFEFEDFQIVGYEPYPPIKMKMSV 303


>gi|49483618|ref|YP_040842.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|57650383|ref|YP_186311.1| thymidylate synthase [Staphylococcus aureus subsp. aureus COL]
 gi|82751018|ref|YP_416759.1| thymidylate synthase [Staphylococcus aureus RF122]
 gi|87160328|ref|YP_494017.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195159|ref|YP_499960.1| thymidylate synthase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221550|ref|YP_001332372.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509594|ref|YP_001575253.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142068|ref|ZP_03566561.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|257425491|ref|ZP_05601916.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428151|ref|ZP_05604549.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257430782|ref|ZP_05607164.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433541|ref|ZP_05609899.1| thymidylate synthase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436382|ref|ZP_05612429.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M876]
 gi|258422540|ref|ZP_05685448.1| thymidylate synthase [Staphylococcus aureus A9635]
 gi|258451086|ref|ZP_05699121.1| thymidylate synthase [Staphylococcus aureus A5948]
 gi|262050396|ref|ZP_06023236.1| thymidylate synthase [Staphylococcus aureus D30]
 gi|282904009|ref|ZP_06311897.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C160]
 gi|282905774|ref|ZP_06313629.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908744|ref|ZP_06316562.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911007|ref|ZP_06318809.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282914217|ref|ZP_06322004.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M899]
 gi|282919139|ref|ZP_06326874.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C427]
 gi|282924322|ref|ZP_06331996.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C101]
 gi|282927524|ref|ZP_06335141.1| thymidylate synthase [Staphylococcus aureus A9765]
 gi|283958192|ref|ZP_06375643.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024427|ref|ZP_06378825.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 132]
 gi|293501243|ref|ZP_06667094.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510204|ref|ZP_06668912.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M809]
 gi|293526798|ref|ZP_06671482.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M1015]
 gi|294850751|ref|ZP_06791469.1| thymidylate synthase [Staphylococcus aureus A9754]
 gi|295427938|ref|ZP_06820570.1| thymidylate synthase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297591097|ref|ZP_06949735.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MN8]
 gi|304380994|ref|ZP_07363651.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|56749740|sp|Q6GGY0|TYSY_STAAR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901166|sp|Q5HFZ6|TYSY_STAAC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123291799|sp|Q2FYK5|TYSY_STAA8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123763295|sp|Q2FH11|TYSY_STAA3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123768559|sp|Q2YY40|TYSY_STAAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172048885|sp|A6QGX8|TYSY_STAAE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036949|sp|A8Z406|TYSY_STAAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|49241747|emb|CAG40437.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|57284569|gb|AAW36663.1| thymidylate synthase [Staphylococcus aureus subsp. aureus COL]
 gi|82656549|emb|CAI80971.1| thymidylate synthase [Staphylococcus aureus RF122]
 gi|87126302|gb|ABD20816.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202717|gb|ABD30527.1| thymidylate synthase, putative [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374350|dbj|BAF67610.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368403|gb|ABX29374.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257271948|gb|EEV04086.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257274992|gb|EEV06479.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278910|gb|EEV09529.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281634|gb|EEV11771.1| thymidylate synthase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284664|gb|EEV14784.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M876]
 gi|257847297|gb|EEV71303.1| thymidylate synthase [Staphylococcus aureus A9635]
 gi|257861141|gb|EEV83954.1| thymidylate synthase [Staphylococcus aureus A5948]
 gi|259161515|gb|EEW46117.1| thymidylate synthase [Staphylococcus aureus D30]
 gi|269940922|emb|CBI49306.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TW20]
 gi|282313709|gb|EFB44102.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C101]
 gi|282316949|gb|EFB47323.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C427]
 gi|282322285|gb|EFB52609.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M899]
 gi|282324702|gb|EFB55012.1| thymidylate synthase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282327008|gb|EFB57303.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331066|gb|EFB60580.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282592064|gb|EFB97090.1| thymidylate synthase [Staphylococcus aureus A9765]
 gi|282595627|gb|EFC00591.1| thymidylate synthase [Staphylococcus aureus subsp. aureus C160]
 gi|283790341|gb|EFC29158.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920356|gb|EFD97420.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096248|gb|EFE26509.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467148|gb|EFF09666.1| thymidylate synthase [Staphylococcus aureus subsp. aureus M809]
 gi|294822391|gb|EFG38842.1| thymidylate synthase [Staphylococcus aureus A9754]
 gi|295128296|gb|EFG57930.1| thymidylate synthase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575983|gb|EFH94699.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MN8]
 gi|302751257|gb|ADL65434.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340470|gb|EFM06407.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312438170|gb|ADQ77241.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195323|gb|EFU25710.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315195862|gb|EFU26230.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140327|gb|EFW32184.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142672|gb|EFW34475.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323438443|gb|EGA96197.1| thymidylate synthase [Staphylococcus aureus O11]
 gi|323444081|gb|EGB01692.1| thymidylate synthase [Staphylococcus aureus O46]
 gi|329314104|gb|AEB88517.1| Thymidylate synthase [Staphylococcus aureus subsp. aureus T0131]
 gi|329730552|gb|EGG66938.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21189]
          Length = 318

 Score =  336 bits (862), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQYKEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|15924417|ref|NP_371951.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927008|ref|NP_374541.1| thymidylate synthase [Staphylococcus aureus subsp. aureus N315]
 gi|21283046|ref|NP_646134.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486268|ref|YP_043489.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|148267914|ref|YP_001246857.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393977|ref|YP_001316652.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979746|ref|YP_001442005.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253315250|ref|ZP_04838463.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732066|ref|ZP_04866231.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733326|ref|ZP_04867491.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255006216|ref|ZP_05144817.2| thymidylate synthase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795518|ref|ZP_05644497.1| thymidylate synthase [Staphylococcus aureus A9781]
 gi|258413327|ref|ZP_05681603.1| thymidylate synthase [Staphylococcus aureus A9763]
 gi|258420567|ref|ZP_05683509.1| thymidylate synthase [Staphylococcus aureus A9719]
 gi|258434662|ref|ZP_05688736.1| thymidylate synthase [Staphylococcus aureus A9299]
 gi|258444762|ref|ZP_05693091.1| thymidylate synthase [Staphylococcus aureus A8115]
 gi|258447404|ref|ZP_05695548.1| thymidylate synthase [Staphylococcus aureus A6300]
 gi|258449245|ref|ZP_05697348.1| thymidylate synthase [Staphylococcus aureus A6224]
 gi|258454623|ref|ZP_05702587.1| thymidylate synthase [Staphylococcus aureus A5937]
 gi|269203049|ref|YP_003282318.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED98]
 gi|282892921|ref|ZP_06301156.1| thymidylate synthase [Staphylococcus aureus A8117]
 gi|282927952|ref|ZP_06335561.1| thymidylate synthase [Staphylococcus aureus A10102]
 gi|295406371|ref|ZP_06816178.1| thymidylate synthase [Staphylococcus aureus A8819]
 gi|296275287|ref|ZP_06857794.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207915|ref|ZP_06924348.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297244600|ref|ZP_06928483.1| thymidylate synthase [Staphylococcus aureus A8796]
 gi|300911999|ref|ZP_07129442.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH70]
 gi|54039797|sp|P67047|TYSY_STAAN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54039798|sp|P67048|TYSY_STAAW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54042283|sp|P67046|TYSY_STAAM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|56749711|sp|Q6G9D4|TYSY_STAAS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231737|sp|A7X2B3|TYSY_STAA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036947|sp|A6U1P7|TYSY_STAA2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036948|sp|A5ISV8|TYSY_STAA9 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|13701225|dbj|BAB42520.1| thymidylate synthase [Staphylococcus aureus subsp. aureus N315]
 gi|14247198|dbj|BAB57589.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204485|dbj|BAB95182.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244711|emb|CAG43146.1| thymidylate synthase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|147740983|gb|ABQ49281.1| thymidylate synthase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946429|gb|ABR52365.1| Thymidylate synthase [Staphylococcus aureus subsp. aureus JH1]
 gi|156721881|dbj|BAF78298.1| thymidylate synthase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253724199|gb|EES92928.1| thymidylate synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728678|gb|EES97407.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257789490|gb|EEV27830.1| thymidylate synthase [Staphylococcus aureus A9781]
 gi|257839891|gb|EEV64359.1| thymidylate synthase [Staphylococcus aureus A9763]
 gi|257843515|gb|EEV67922.1| thymidylate synthase [Staphylococcus aureus A9719]
 gi|257849023|gb|EEV73005.1| thymidylate synthase [Staphylococcus aureus A9299]
 gi|257850255|gb|EEV74208.1| thymidylate synthase [Staphylococcus aureus A8115]
 gi|257853595|gb|EEV76554.1| thymidylate synthase [Staphylococcus aureus A6300]
 gi|257857233|gb|EEV80131.1| thymidylate synthase [Staphylococcus aureus A6224]
 gi|257863006|gb|EEV85770.1| thymidylate synthase [Staphylococcus aureus A5937]
 gi|262075339|gb|ACY11312.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ED98]
 gi|282590249|gb|EFB95329.1| thymidylate synthase [Staphylococcus aureus A10102]
 gi|282764918|gb|EFC05043.1| thymidylate synthase [Staphylococcus aureus A8117]
 gi|285817105|gb|ADC37592.1| Thymidylate synthase [Staphylococcus aureus 04-02981]
 gi|294968959|gb|EFG44981.1| thymidylate synthase [Staphylococcus aureus A8819]
 gi|296887489|gb|EFH26389.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178630|gb|EFH37876.1| thymidylate synthase [Staphylococcus aureus A8796]
 gi|300886245|gb|EFK81447.1| thymidylate synthase [Staphylococcus aureus subsp. aureus TCH70]
 gi|312829821|emb|CBX34663.1| thymidylate synthase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129137|gb|EFT85132.1| thymidylate synthase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329727369|gb|EGG63825.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21172]
 gi|329733414|gb|EGG69746.1| thymidylate synthase [Staphylococcus aureus subsp. aureus 21193]
          Length = 318

 Score =  336 bits (862), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIKSDEYNGPDMTDFGHRALSDPEFNEQYKEQMKQF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVSAW
Sbjct: 129 KQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSD-KSIFDINYEDLEIVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|6729892|pdb|1BP6|A Chain A, Thymidylate Synthase R23i, R179t Double Mutant
          Length = 316

 Score =  336 bits (861), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 144/313 (46%), Positives = 185/313 (59%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDL + V+  G  + D T  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELLW
Sbjct: 4   QPYLDLAKKVLDEGHFKPDITHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FL GD+N+ +L +H   IWDEWA                                     
Sbjct: 64  FLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEMA 123

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR  IVS
Sbjct: 124 KFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRTLIVS 183

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 184 AWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHE 243

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L +
Sbjct: 244 CGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLN 303

Query: 252 YEPHAAILAKVSV 264
           Y+P+ AI A V+V
Sbjct: 304 YDPYPAIKAPVAV 316


>gi|149247396|ref|XP_001528110.1| thymidylate synthase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146448064|gb|EDK42452.1| thymidylate synthase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 312

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 134/303 (44%), Positives = 178/303 (58%), Gaps = 40/303 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
             YLDL   +I  G  R DRTG GT+S F   Q+RFDLS   FPLLTTK+V  K ++HEL
Sbjct: 10  QAYLDLCERIINEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKRVFSKGIIHEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+                ++G+LGP+YG QWR +      
Sbjct: 70  LWFIAGSTDAKILSDKGVKIWEGNGLREFLDKLGLTHRREGDLGPVYGFQWRHFGAEYKD 129

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ+  +++ L+ +PY RR I+SAWN     KMALPPCH   QFYV+    
Sbjct: 130 CDADYTGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPSN 189

Query: 156 ----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
                       KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+    GEFIHTLGD
Sbjct: 190 KNDEQNSEKSRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLGD 249

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPN----IVDLLSFRYEDFTLRSYEPHAAILAK 261
            H+Y +H E    Q +R+P+  P+++I  +    I ++  F++EDF +  YEP+ AI  K
Sbjct: 250 AHVYLDHVEALQEQFTRTPKQFPKLVIKEDRREEIKNIDDFKFEDFEIVGYEPYPAIKMK 309

Query: 262 VSV 264
           +SV
Sbjct: 310 MSV 312


>gi|31790281|gb|AAP57962.1| dihydrofolate reductase/thymidilate synthase [Babesia bovis]
          Length = 511

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 131/281 (46%), Positives = 179/281 (63%), Gaps = 20/281 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+L  V+  G  + +RTG    S FGYQMRFDLS+ FPLLTTKKV  +S++ ELLWF
Sbjct: 230 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 289

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSWP-------- 102
           ++G +N + L    V IW+     E+ DK+G       +LGPIYG QWR +         
Sbjct: 290 IKGSTNGNDLLAKNVRIWELNGRREFLDKNGFTEREEHDLGPIYGFQWRHFGAEYLDMHA 349

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  IDQ++ I+  ++ +P  RR IV +WNV+ + KMALPPCHC FQFYV + KLSC 
Sbjct: 350 DYTGKGIDQLAEIINRIKTNPNDRRMIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 409

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYS+LT M+A V G   GEF+H L D H+Y +H +    Q++R
Sbjct: 410 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 469

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            P   P++ +NP+I ++  F  +D  +  Y  H AI   +S
Sbjct: 470 IPYPFPRLRLNPDIKNIEDFTIDDIVVEDYVSHPAIPMAMS 510


>gi|145535888|ref|XP_001453677.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|2833339|sp|Q27828|DRTS_PARTE RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|434592|gb|AAC47025.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
 gi|124421399|emb|CAK86280.1| unnamed protein product [Paramecium tetraurelia]
          Length = 462

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 135/283 (47%), Positives = 174/283 (61%), Gaps = 21/283 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLD++  ++K G  + DRTGVGT S FG  MRF+L++ FPLLTTKKV ++ VV ELLW
Sbjct: 181 NQYLDMITKIMKEGVSKDDRTGVGTMSIFGQTMRFNLAQSFPLLTTKKVFFRGVVEELLW 240

Query: 62  FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP------- 102
           FLRG++N   L   GV IW+                ++ +LGP+YG QWR +        
Sbjct: 241 FLRGNTNGKLLLDKGVKIWEGNGTREYLDTIGLQHRQEHDLGPVYGFQWRHFGAKYKDCQ 300

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    +DQ+  I+Q L+ +P SRR I+SAWN   + +MALPPCH + QF+V NGKLSC
Sbjct: 301 TDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMALPPCHVMSQFFVANGKLSC 360

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D  LGIPFNIASY+LLT MLA       GEF+H LGD H+Y+NH E    Q+ 
Sbjct: 361 MMYQRSCDFGLGIPFNIASYALLTYMLAKECNLNLGEFVHVLGDTHIYSNHVEALKKQIE 420

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + I  N   L  + YEDF L  Y  H  I  K++V
Sbjct: 421 RVPYPFPLLKIKGN-KSLFDYTYEDFELVGYNAHDKIEMKMAV 462


>gi|167756640|ref|ZP_02428767.1| hypothetical protein CLORAM_02177 [Clostridium ramosum DSM 1402]
 gi|167702815|gb|EDS17394.1| hypothetical protein CLORAM_02177 [Clostridium ramosum DSM 1402]
          Length = 292

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 135/295 (45%), Positives = 187/295 (63%), Gaps = 34/295 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD+ ++V++ G +R DRTG GTRS FGYQ R+DL  GFPL+TTKK+  + +  ELL
Sbjct: 1   MKQYLDMCKYVLENGENREDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFLRPIAEELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91
           WF++GD+N+ YL    V IW+EW                               K G+LG
Sbjct: 61  WFIKGDTNIKYLVDRNVKIWNEWPYEDFKKSPDFNGETIEEFVEKIKTDDEFAKKHGDLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +   +   +DQ++ +V SL  +P+SRRHI+ AWN A +D MALPPCH   Q
Sbjct: 121 PVYGAQWRDF---NYEGVDQLAKLVDSLTNNPFSRRHIICAWNPAQVDNMALPPCHAFLQ 177

Query: 152 FYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           FYV   K  LSCQLYQRS D+FLG+PFNIASY+L+T MLA   G++  EFIHT+GD H+Y
Sbjct: 178 FYVSADKKYLSCQLYQRSADIFLGVPFNIASYALMTEMLARTCGYEAKEFIHTIGDAHIY 237

Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +HFE    Q++R P    ++++NP++  +  ++ ED  +  Y+ H  ++ KVSV
Sbjct: 238 KDHFEVVKQQIAREPLPKCKLVLNPDVKSIFDYKIEDIKIEDYQSHGKLVGKVSV 292


>gi|331017946|gb|EGH98002.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 277

 Score =  335 bits (860), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 131/277 (47%), Positives = 178/277 (64%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LLR VI+ GS++ DRTG GT + FG Q R +L+ GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKQYLELLRDVIENGSEKGDRTGTGTTAVFGRQFRHNLADGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L G +N  +L+ +GV+IWDEWA +DG+LGP+YG QW  WP  DG  I+QI  +V  L+
Sbjct: 61  WMLSGSTNTKWLNENGVTIWDEWATEDGDLGPVYGAQWTGWPTKDGGKINQIDYMVDCLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPP-------------CHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WN   +    L P             CH L+Q +V +GKLS QLY RS
Sbjct: 121 NNPNSRRILFHGWNTEYLPDEKLSPQENVKNGKQALAVCHLLYQAFVADGKLSMQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+P+N A+ +LLT MLA        E I +LGD H Y NH +Q + QL R+P+ L
Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVSLGDAHAYANHRDQINTQLLRAPKKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PQ+IIN     +  +++EDF +  YE   +I A V++
Sbjct: 241 PQLIINRRPSSIYDYKFEDFEVVGYEADPSIRAPVAI 277


>gi|4039150|gb|AAC97508.1| thymidylate synthase [Caenorhabditis elegans]
          Length = 315

 Score =  335 bits (860), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 120/284 (42%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           ++YL  +  +++ G+ R DRTG GT S FG Q ++ L  G  PLLTTK+V+WK V+ ELL
Sbjct: 32  YKYLKQVEQILREGTRRDDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRVYWKGVLEELL 91

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF+ G ++   L    V IW++  D            ++G+LGP+YG QWR +       
Sbjct: 92  WFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDC 151

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ++ +++ ++  P SRR I+SAWN + + +M LPPCH + QFYVDNG+LS
Sbjct: 152 HTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSDLGQMVLPPCHTMCQFYVDNGELS 211

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGD+ LG+PFN+ASY LLT M+A V G + G  +HTLGD H+Y+NH +   +QL
Sbjct: 212 CQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPGTLVHTLGDAHVYSNHVDALKIQL 271

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P   P++    ++  +  F  +   L  Y+ H  I   ++V
Sbjct: 272 DREPYAFPKIRFTRDVASIDDFTSDMIALDDYKCHPKIPMDMAV 315


>gi|71993377|ref|NP_491532.3| hypothetical protein Y110A7A.4 [Caenorhabditis elegans]
 gi|7331734|gb|AAF60422.1| Hypothetical protein Y110A7A.4 [Caenorhabditis elegans]
          Length = 312

 Score =  335 bits (860), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 120/284 (42%), Positives = 175/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           ++YL  +  +++ G+ R DRTG GT S FG Q ++ L  G  PLLTTK+V+WK V+ ELL
Sbjct: 29  YKYLKQVEQILREGTRRDDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRVYWKGVLEELL 88

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF+ G ++   L    V IW++  D            ++G+LGP+YG QWR +       
Sbjct: 89  WFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDC 148

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ++ +++ ++  P SRR I+SAWN + + +M LPPCH + QFYVDNG+LS
Sbjct: 149 HTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSDLGQMVLPPCHTMCQFYVDNGELS 208

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGD+ LG+PFN+ASY LLT M+A V G + G  +HTLGD H+Y+NH +   +QL
Sbjct: 209 CQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKPGTLVHTLGDAHVYSNHVDALKIQL 268

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P   P++    ++  +  F  +   L  Y+ H  I   ++V
Sbjct: 269 DREPYAFPKIRFTRDVASIDDFTSDMIALDDYKCHPKIPMDMAV 312


>gi|66356564|ref|XP_625460.1| dihydrofolate reductase-thymidylate synthase [Cryptosporidium
           parvum Iowa II]
 gi|46226446|gb|EAK87446.1| dihydrofolate reductase-thymidylate synthase [Cryptosporidium
           parvum Iowa II]
          Length = 531

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 127/283 (44%), Positives = 179/283 (63%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  +S+  EL+WF
Sbjct: 249 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 308

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           ++GD+N ++L    V IW                 ++ +LGPIYG QWR +         
Sbjct: 309 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 368

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 369 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 428

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 429 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 488

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I  +++V
Sbjct: 489 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMEMAV 531


>gi|241889739|ref|ZP_04777037.1| thymidylate synthase [Gemella haemolysans ATCC 10379]
 gi|241863361|gb|EER67745.1| thymidylate synthase [Gemella haemolysans ATCC 10379]
          Length = 310

 Score =  335 bits (859), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 141/313 (45%), Positives = 197/313 (62%), Gaps = 56/313 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            +YL L  H+++ G ++ DRTGVGT+S FGYQM+F+LS+GFPLLTTKKV++  V  ELLW
Sbjct: 4   KEYLKLCNHILENGIEKEDRTGVGTKSIFGYQMKFNLSEGFPLLTTKKVNFNLVWSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ +L  +  +IW+EW                                      
Sbjct: 64  FIKGDTNIKFLLENKNNIWNEWAFKKWIESDEYTGPDMTDFGHRTLVDEKFSKQYKEQMT 123

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       + K G+LG +YG QWR +     N IDQ+ ++V+ ++ +P SRR IVS
Sbjct: 124 IFKERILSDEEFSKKFGDLGNVYGKQWRDF-----NGIDQLKNVVEQIKTNPSSRRLIVS 178

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           +WN A +D MALPPCH LFQFYV++GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A  
Sbjct: 179 SWNPAEVDTMALPPCHSLFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKE 238

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q   Q+SR+P +LP++ +  +   +   + ED  + +
Sbjct: 239 CGLEVGEFVHTLGDAHIYKNHFDQVKEQMSRTPYSLPELKVK-DFESIFDLKIEDVEIVN 297

Query: 252 YEPHAAILAKVSV 264
           YE H  I A ++V
Sbjct: 298 YESHPFIKAPIAV 310


>gi|323464469|gb|ADX76622.1| thymidylate synthase [Staphylococcus pseudintermedius ED99]
          Length = 317

 Score =  335 bits (859), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 139/311 (44%), Positives = 187/311 (60%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL + +++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  EL+WF+
Sbjct: 8   YHDLCKEILEIGNQRDDRTATGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELIWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEW---------------------------------------- 83
           RGD+N+ YL ++  +IW+EW                                        
Sbjct: 68  RGDTNLRYLLQYNNNIWNEWAFEKYVQSEDYTGPDMTDFGHRAQSDAAFAETYREEMTKF 127

Query: 84  ----------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W   DG   DQ+ ++++ ++ +P SRRHI+SAW
Sbjct: 128 KQQILTDDDFMKKHGDLGNVYGKQWRNWVSADGQQYDQLKALIEQIKTNPNSRRHIISAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I+ MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIASYSLLT ++A   G
Sbjct: 188 NPTEIETMALPPCHTLFQFYVQDNKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKECG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+RS    P++ IN +   +    YED  + +YE
Sbjct: 248 LEVGEFVHTFGDAHIYSNHLDAVKTQLARSSFAPPELKINTD-RSIFDIEYEDLEIVNYE 306

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 307 SHPAIKAPIAV 317


>gi|126274226|ref|XP_001387889.1| Thymidylate synthase [Scheffersomyces stipitis CBS 6054]
 gi|126213759|gb|EAZ63866.1| Thymidylate synthase [Pichia stipitis CBS 6054]
          Length = 316

 Score =  334 bits (858), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 132/307 (42%), Positives = 176/307 (57%), Gaps = 44/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
             YLDL   +I  G  R DRTG GT+S F   Q+RFDLS   FPLLTTKKV  + ++HEL
Sbjct: 10  QAYLDLCEKIINEGEFRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSRGIIHEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+                ++G+LGP+YG QWR +      
Sbjct: 70  LWFVAGSTDAKLLSEKGVKIWEGNGSREFLDNLGLTHRREGDLGPVYGFQWRHFGAEYKD 129

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ++ +++ L+ +PY RR I+SAWN     KMALPPCH   QF+V     
Sbjct: 130 CDADYTGQGYDQLADVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFFVSFPST 189

Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
                           KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++    GEFIH
Sbjct: 190 NPESNTSKQAKAETRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIH 249

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMII----NPNIVDLLSFRYEDFTLRSYEPHAA 257
           TLGD H+Y +H +    QL+R+P+  P+++I       I  +  FR+EDF +  YEP+  
Sbjct: 250 TLGDAHVYLDHIDAIKEQLTRTPKDFPKLLIKEERKDKITSIDDFRFEDFEIVGYEPYPP 309

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 310 IKMKMSV 316


>gi|157864294|ref|XP_001680857.1| dihydrofolate reductase-thymidylate synthase [Leishmania major]
 gi|118936|sp|P07382|DRTS_LEIMA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|9546|emb|CAA36019.1| unnamed protein product [Leishmania major]
 gi|159310|gb|AAA29232.1| dihydrofolate reductase-thymidylate synthase (EC 1.5.1.3 and EC
           2.1.1.45) [Leishmania major]
 gi|68124149|emb|CAJ02132.1| dihydrofolate reductase-thymidylate synthase [Leishmania major
           strain Friedlin]
          Length = 520

 Score =  334 bits (858), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 128/286 (44%), Positives = 171/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG+++   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETSAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI  IV++++ +P  RR +V+AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIKLIVETIKTNPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH +    
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P +I       L  +   D  +  Y PH AI  +++V
Sbjct: 475 QLERVPHAFPTLIFKEERQYLEDYELTDMEVIDYVPHPAIKMEMAV 520


>gi|118935|sp|P16126|DRTS_LEIAM RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|9471|emb|CAA36020.1| unnamed protein product [Leishmania amazonensis]
          Length = 520

 Score =  334 bits (858), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 125/286 (43%), Positives = 169/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIAKEDRTGVGTLSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD    ++             +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENTEMDLGPVYGFQWRHFGAEYRGL 354

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-- 158
             +YDG  +DQI  IV++++A+P  RR + +AWN   + KMALPPCH L QFYV+  K  
Sbjct: 355 EANYDGEGVDQIKFIVETIKANPNDRRLLFTAWNPCALHKMALPPCHLLAQFYVNTEKSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y +H +    
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRSHIDALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH  I  +++V
Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELMDMEVIDYVPHPPIKMEMAV 520


>gi|197107400|pdb|3DL5|A Chain A, Crystal Structure Of The A287f Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|197107401|pdb|3DL5|B Chain B, Crystal Structure Of The A287f Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|197107402|pdb|3DL5|C Chain C, Crystal Structure Of The A287f Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|197107403|pdb|3DL5|D Chain D, Crystal Structure Of The A287f Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|197107404|pdb|3DL5|E Chain E, Crystal Structure Of The A287f Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
          Length = 521

 Score =  334 bits (858), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 127/283 (44%), Positives = 178/283 (62%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  +S+  EL+WF
Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVFIRSIFEELIWF 298

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           ++GD+N ++L    V IW                 ++ +LGPIYG QWR +         
Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I   ++V
Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521


>gi|297342898|pdb|3HJ3|A Chain A, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site
           Mut
 gi|297342899|pdb|3HJ3|B Chain B, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site
           Mut
 gi|297342900|pdb|3HJ3|C Chain C, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site
           Mut
 gi|297342901|pdb|3HJ3|D Chain D, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site
           Mut
          Length = 521

 Score =  334 bits (858), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 127/283 (44%), Positives = 178/283 (62%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  +S+  EL+WF
Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           ++GD+N ++L    V IW                 ++ +LGPIYG QWR +         
Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I   ++V
Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521


>gi|319892428|ref|YP_004149303.1| Thymidylate synthase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162124|gb|ADV05667.1| Thymidylate synthase [Staphylococcus pseudintermedius HKU10-03]
          Length = 317

 Score =  334 bits (858), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 140/311 (45%), Positives = 188/311 (60%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL + +++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  EL+WF+
Sbjct: 8   YHDLCKEILEIGNQRDDRTATGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELIWFI 67

Query: 64  RGDSNVSYLHRHGVSIWDEW---------------------------------------- 83
           RGD+N+ YL ++  +IW+EW                                        
Sbjct: 68  RGDTNLRYLLQYNNNIWNEWAFEKYVQSEDYTGPDMTDFGHRAQSDAAFAETYREEMTKF 127

Query: 84  ----------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR+W   DG   DQ+ ++++ ++A+P SRRHI+SAW
Sbjct: 128 KQQILTDDDFMKKHGDLGNVYGKQWRNWVSADGQQYDQLKALIEQIKANPNSRRHIISAW 187

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   I+ MALPPCH LFQFYV + KLSCQLYQRS D+FLG+PFNIASYSLLT ++A   G
Sbjct: 188 NPTEIETMALPPCHTLFQFYVQDNKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKECG 247

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +    QL+RS    P++ IN +   +    YED  + +YE
Sbjct: 248 LEVGEFVHTFGDAHIYSNHLDAVKTQLARSSFAPPELKINTD-RSIFDIEYEDLEIVNYE 306

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 307 SHPAIKAPIAV 317


>gi|99082913|gb|ABF66630.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  334 bits (858), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNKKLFHREVNDLGPIYGFQWRHFGAGYTNMH 455

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617


>gi|197107405|pdb|3DL6|A Chain A, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF
           Ts-Dhfr From Cryptosporidium Hominis
 gi|197107406|pdb|3DL6|B Chain B, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF
           Ts-Dhfr From Cryptosporidium Hominis
 gi|197107407|pdb|3DL6|C Chain C, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF
           Ts-Dhfr From Cryptosporidium Hominis
 gi|197107408|pdb|3DL6|D Chain D, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF
           Ts-Dhfr From Cryptosporidium Hominis
 gi|197107409|pdb|3DL6|E Chain E, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF
           Ts-Dhfr From Cryptosporidium Hominis
          Length = 521

 Score =  334 bits (858), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 126/283 (44%), Positives = 177/283 (62%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  + +  EL+WF
Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVFIRGIFEELIWF 298

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           ++GD+N ++L    V IW                 ++ +LGPIYG QWR +         
Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I   ++V
Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521


>gi|67594753|ref|XP_665866.1| chain A, crystal structure of Dhfr [Cryptosporidium hominis TU502]
 gi|39654756|pdb|1QZF|A Chain A, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis
 gi|39654757|pdb|1QZF|B Chain B, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis
 gi|39654758|pdb|1QZF|C Chain C, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis
 gi|39654759|pdb|1QZF|D Chain D, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis
 gi|39654760|pdb|1QZF|E Chain E, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis
 gi|49258971|pdb|1SEJ|A Chain A, Crystal Structure Of Dihydrofolate Reductase-Thymidylate
           Synthase From Cryptosporidium Hominis Bound To
           1843u89NADPHDUMP
 gi|49258972|pdb|1SEJ|B Chain B, Crystal Structure Of Dihydrofolate Reductase-Thymidylate
           Synthase From Cryptosporidium Hominis Bound To
           1843u89NADPHDUMP
 gi|49258973|pdb|1SEJ|C Chain C, Crystal Structure Of Dihydrofolate Reductase-Thymidylate
           Synthase From Cryptosporidium Hominis Bound To
           1843u89NADPHDUMP
 gi|49258974|pdb|1SEJ|D Chain D, Crystal Structure Of Dihydrofolate Reductase-Thymidylate
           Synthase From Cryptosporidium Hominis Bound To
           1843u89NADPHDUMP
 gi|49258975|pdb|1SEJ|E Chain E, Crystal Structure Of Dihydrofolate Reductase-Thymidylate
           Synthase From Cryptosporidium Hominis Bound To
           1843u89NADPHDUMP
 gi|1480451|gb|AAC47230.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Cryptosporidium parvum]
 gi|54656722|gb|EAL35637.1| chain A, crystal structure of Dhfr [Cryptosporidium hominis]
          Length = 521

 Score =  334 bits (858), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 127/283 (44%), Positives = 178/283 (62%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  +S+  EL+WF
Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           ++GD+N ++L    V IW                 ++ +LGPIYG QWR +         
Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I   ++V
Sbjct: 479 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521


>gi|99030329|gb|ABF61430.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
 gi|99082911|gb|ABF66629.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  334 bits (857), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617


>gi|156098099|ref|XP_001615082.1| bifunctional dihydrofolate reductase-thymidylate synthase 1
           [Plasmodium vivax SaI-1]
 gi|148803956|gb|EDL45355.1| bifunctional dihydrofolate reductase-thymidylate synthase 1,
           putative [Plasmodium vivax]
          Length = 624

 Score =  334 bits (857), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKIAMEMA 623


>gi|227890206|ref|ZP_04008011.1| thymidylate synthase [Lactobacillus johnsonii ATCC 33200]
 gi|227849208|gb|EEJ59294.1| thymidylate synthase [Lactobacillus johnsonii ATCC 33200]
          Length = 318

 Score =  334 bits (857), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 141/313 (45%), Positives = 180/313 (57%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ +  +  ELLW
Sbjct: 6   QPYLDLLSKIMNEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L  H   IWDEWA                                     
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVESSEYQGPDMTNFGLRSQEDPEFKRIYQEEMQ 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVS
Sbjct: 126 KFDQKVLEDQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL  +++  
Sbjct: 186 AWNPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLISRE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHTLGD H+Y NHF Q    L+RS    P + +NP+   +  F  +D  L +
Sbjct: 246 TGLKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLIN 305

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 306 YRHHGTIKAPVAV 318


>gi|152149198|pdb|2OIP|A Chain A, Crystal Structure Of The S290g Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|152149199|pdb|2OIP|B Chain B, Crystal Structure Of The S290g Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|152149200|pdb|2OIP|C Chain C, Crystal Structure Of The S290g Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|152149201|pdb|2OIP|D Chain D, Crystal Structure Of The S290g Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
 gi|152149202|pdb|2OIP|E Chain E, Crystal Structure Of The S290g Active Site Mutant Of Ts-
           Dhfr From Cryptosporidium Hominis
          Length = 519

 Score =  334 bits (857), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 126/283 (44%), Positives = 177/283 (62%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  + +  EL+WF
Sbjct: 237 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRGIFEELIWF 296

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           ++GD+N ++L    V IW                 ++ +LGPIYG QWR +         
Sbjct: 297 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 356

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 357 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 416

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 417 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 476

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  PQ+     + ++  F++ED  L  Y P+  I   ++V
Sbjct: 477 RTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 519


>gi|329770535|ref|ZP_08261913.1| thymidylate synthase [Gemella sanguinis M325]
 gi|328836284|gb|EGF85953.1| thymidylate synthase [Gemella sanguinis M325]
          Length = 310

 Score =  334 bits (857), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 198/313 (63%), Gaps = 56/313 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            +YLDL +H++  G +++DRTGVGT+S FGYQM+FDL+ GFPLLTTKKV++  V  ELLW
Sbjct: 4   KEYLDLCKHILDNGIEKKDRTGVGTKSIFGYQMKFDLNNGFPLLTTKKVNFNLVWSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIW----------------------------------------- 80
           F++GD+N+ +L ++  +IW                                         
Sbjct: 64  FIKGDTNIRFLLQNNNNIWNEWAFKKWVESDEYNGPDMTDFGHRTLVDEDFAKDYKEQMK 123

Query: 81  ---------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                    DE+++K G+LG +YG QWR++     N +DQ+ ++++ ++ +P SRR IVS
Sbjct: 124 FFKEKILTDDEFSNKYGDLGNVYGKQWRNF-----NGVDQLKNVIEQIKENPSSRRLIVS 178

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           +WN A +D MALPPCH LFQFYV +GKLSCQLYQRSGDVFLG+PFNIASYSLLT+++A  
Sbjct: 179 SWNPAEVDTMALPPCHSLFQFYVSDGKLSCQLYQRSGDVFLGVPFNIASYSLLTILIAKE 238

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
              + GEF+HTLGD H+YNNHF+Q + Q+SR+P  LP + IN     +   +  D  L +
Sbjct: 239 CNLEVGEFVHTLGDAHIYNNHFDQVNEQISRTPYDLPSLKIN-EFQSIFDLKISDVELVN 297

Query: 252 YEPHAAILAKVSV 264
           YE H  I A ++V
Sbjct: 298 YESHPFIKAPIAV 310


>gi|22003398|gb|AAM88660.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
          Length = 520

 Score =  334 bits (857), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 128/285 (44%), Positives = 170/285 (59%), Gaps = 23/285 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETNARLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI  IV++++A+P  RR +V+AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIRFIVETIKANPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH +    
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           QL R P   P +I       L  +   D  +  Y PH  I  +++
Sbjct: 475 QLERVPHAFPTLIFKAERQFLEDYELTDMEVIDYVPHPPIKMEMA 519


>gi|110004417|emb|CAK98755.1| putative thymidylate synthase transmembrane protein [Spiroplasma
           citri]
          Length = 298

 Score =  334 bits (857), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 146/294 (49%), Positives = 197/294 (67%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL + R +++ G ++ DRT  GT S FGYQMRF+LS+GFP+LTTKK+H+KS+V+ELL
Sbjct: 10  MEQYLKMARFILEHGQEKDDRTNTGTISYFGYQMRFNLSEGFPILTTKKIHFKSIVYELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91
           WF++GD+N+ YL  H V IW+EW  K+                             G+LG
Sbjct: 70  WFIKGDTNIKYLVDHDVRIWNEWPYKNYQASSKYNNETLAEFVEKIKTDANFAAEFGDLG 129

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++     N +DQ++ ++++L+ +PYSRRHI+SAWN A +D+MALPPCH L Q
Sbjct: 130 PVYGKQWRNF-----NGVDQLAKLLENLKKNPYSRRHIISAWNPAEVDEMALPPCHTLIQ 184

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           FYV  + KLSCQLYQRS DVFLG+PFNIASY+LLT ++A V+G   G+F+HTLGD H+Y 
Sbjct: 185 FYVSKDNKLSCQLYQRSADVFLGVPFNIASYALLTHLIAQVVGLDAGDFVHTLGDCHIYK 244

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH  Q   QL RS   LP + +N  I  L  F++ED  L +Y+P   I   V+V
Sbjct: 245 NHLSQIKEQLRRSLGKLPTLKLNQTISSLFDFKFEDIMLENYDPAPLIKGTVAV 298


>gi|186702041|gb|ACC91332.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
 gi|186702043|gb|ACC91333.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
 gi|186702045|gb|ACC91334.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
 gi|186702051|gb|ACC91337.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 624

 Score =  334 bits (857), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 623


>gi|99082915|gb|ABF66631.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  334 bits (857), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617


>gi|159404|gb|AAA29272.1| thymidylate synthase-dihydrofolate reductase (EC 2.1.1.45; EC
           1.5.1.3) [Leishmania tropica]
          Length = 520

 Score =  334 bits (856), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 127/286 (44%), Positives = 171/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG+++   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETSAQLLTDKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI  IV++++ +P  RR +V+AWN   + KMA+PPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIKLIVETIKTNPNDRRLLVTAWNPCALQKMAVPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH +    
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P +I       L  +   D  +  Y PH AI  +++V
Sbjct: 475 QLERVPHAFPTLIFKEERQYLEDYELTDMEVIDYVPHPAIKMEMAV 520


>gi|186702047|gb|ACC91335.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 624

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 623


>gi|5565933|gb|AAD45276.1|AF152114_4 thymidylate synthase [Mycoplasma gallisepticum]
          Length = 289

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 143/294 (48%), Positives = 192/294 (65%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDLL  V+  G  ++DRT  GT S FG Q R+DL +GFPLLTTKK+ WK++ HELL
Sbjct: 1   MKTYLDLLEKVMTKGEVKKDRTNTGTISYFGTQSRYDLREGFPLLTTKKMAWKAICHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91
           WFL+GD+N+ YL  H V+IW+EW  +                              G+LG
Sbjct: 61  WFLKGDTNMKYLVDHNVNIWNEWPYEAFKKSNDFKGESLQDFVEKIKTDNQFAQQYGKLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +     N +DQI  ++  ++ +P+SRR IVSAWN   I +MALPPCH  FQ
Sbjct: 121 PVYGKQWRDF-----NGVDQIEWVINEIKTNPFSRRLIVSAWNPGEIKEMALPPCHSFFQ 175

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           F+V+   ++S QLYQRSGD+FLG+PFNIASYSLL +M+A V   +  EFIHT+GD H+Y+
Sbjct: 176 FFVNEKYEISLQLYQRSGDLFLGVPFNIASYSLLLLMVAQVTWLKPAEFIHTIGDTHIYS 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH EQ  +QL R P+ LP++ +NP+I ++  FR+ED +L +YE H  I  KV+V
Sbjct: 236 NHLEQVKIQLQREPKKLPKVTLNPDIKNIFDFRFEDISLENYEHHDPIKGKVAV 289


>gi|186702049|gb|ACC91336.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 630

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 408 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 467

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 468 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 588 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 629


>gi|255717360|ref|XP_002554961.1| KLTH0F17864p [Lachancea thermotolerans]
 gi|238936344|emb|CAR24524.1| KLTH0F17864p [Lachancea thermotolerans]
          Length = 328

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 132/292 (45%), Positives = 172/292 (58%), Gaps = 29/292 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTF-GYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
            QYLDL + +I+ G  R DRTG GT S F   Q+RFDLS   FPLLTTK+V  K ++ EL
Sbjct: 37  QQYLDLCQRIIEEGDFRPDRTGTGTYSLFVPPQLRFDLSNDRFPLLTTKRVFTKGIILEL 96

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+    ++            G+LGP+YG QWR +      
Sbjct: 97  LWFISGCTDGKKLSEQGVKIWEGNGSREYLDKLGLTDRREGDLGPVYGFQWRHFGADYKT 156

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154
              DY     DQ+  I+  ++ +P  RR I+SAWN     KMALPPCH   QFYV     
Sbjct: 157 CEDDYTNQGFDQLEDIIHRIKTNPTDRRIIMSAWNPPDFAKMALPPCHVFSQFYVTLPKK 216

Query: 155 --DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
             +  KLSC LYQRS D+ LG+PFNIASY+LLT M+A V   + GEFIHT+GD H+Y +H
Sbjct: 217 EGERPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVCEMEPGEFIHTMGDAHVYKDH 276

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +    Q+ R PR  P++ I  N+ D+  F+YEDF +  Y PH  I  K+SV
Sbjct: 277 IDALKEQIQRFPRDFPKLKIKRNVADINDFKYEDFEISEYNPHGKIQMKMSV 328


>gi|9625888|ref|NP_040136.1| thymidylate synthase [Human herpesvirus 3]
 gi|136617|sp|P09249|TYSY_VZVD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|259550834|sp|Q4JQW2|TYSY_VZVO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|60002|emb|CAA27896.1| thymidylate synthase [Human herpesvirus 3 strain Dumas]
 gi|46981424|gb|AAT07695.1| thymidylate synthase [Human herpesvirus 3]
 gi|46981495|gb|AAT07771.1| thymidylate synthase [Human herpesvirus 3]
 gi|66865982|gb|AAY57630.1| ORF13 [Human herpesvirus 3]
 gi|66866054|gb|AAY57701.1| ORF13 [Human herpesvirus 3]
 gi|83721821|emb|CAI44856.1| thymidylate synthase [Human herpesvirus 3]
 gi|90992812|gb|ABE03031.1| thymidylate synthase [Human herpesvirus 3]
 gi|91980314|gb|ABE67121.1| thymidylate synthase [Human herpesvirus 3]
 gi|94481811|gb|ABF21513.1| thymidylate synthase [Human herpesvirus 3]
 gi|94481885|gb|ABF21586.1| thymidylate synthase [Human herpesvirus 3]
 gi|94481959|gb|ABF21659.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482033|gb|ABF21732.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482107|gb|ABF21805.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482181|gb|ABF21878.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482255|gb|ABF21951.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482329|gb|ABF22024.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482403|gb|ABF22097.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482477|gb|ABF22170.1| thymidylate synthase [Human herpesvirus 3]
 gi|94482551|gb|ABF22243.1| thymidylate synthase [Human herpesvirus 3]
 gi|111184746|gb|ABH08454.1| thymidylate synthase [Human herpesvirus 3]
 gi|157965782|gb|ABW06928.1| thymidylate synthase [Human herpesvirus 3]
          Length = 301

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 125/281 (44%), Positives = 180/281 (64%), Gaps = 20/281 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  +  ++++G  +RDRTG+GT S FG Q R++L   FPLLTTK+V W++VV ELLWF
Sbjct: 20  QYLKQVDDILRYGVRKRDRTGIGTLSLFGMQARYNLRNEFPLLTTKRVFWRAVVEELLWF 79

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102
           +RG ++   L    + IWD +                G+LGPIYG QWR +         
Sbjct: 80  IRGSTDSKELAAKDIHIWDIYGSSKFLNRNGFHKRHTGDLGPIYGFQWRHFGAEYKDCQS 139

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y    IDQ+ +++ +++ +P SRR I+S+WN   I  M LPPCH L QFYV NG+LSCQ
Sbjct: 140 NYLQQGIDQLQTVIDTIKTNPESRRMIISSWNPKDIPLMVLPPCHTLCQFYVANGELSCQ 199

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRSGD+ LG+PFNIA Y+LLT ++A V G + G+ IHT+GD H+Y NH +   +QL+R
Sbjct: 200 VYQRSGDMGLGVPFNIAGYALLTYIVAHVTGLKTGDLIHTMGDAHIYLNHIDALKVQLAR 259

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           SP+  P + I  N+ D+  F+++DF L  Y PH  +  +++
Sbjct: 260 SPKPFPCLKIIRNVTDINDFKWDDFQLDGYNPHPPLKMEMA 300


>gi|186702037|gb|ACC91330.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 624

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 623


>gi|319935855|ref|ZP_08010281.1| thymidylate synthase [Coprobacillus sp. 29_1]
 gi|319809122|gb|EFW05603.1| thymidylate synthase [Coprobacillus sp. 29_1]
          Length = 295

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 142/298 (47%), Positives = 191/298 (64%), Gaps = 37/298 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L +H+++ G DR DRTG GTRS FGYQ R+DL +GFPLLTTKK+  + +  ELL
Sbjct: 1   MKQYLELCKHILENGEDRDDRTGTGTRSVFGYQTRYDLREGFPLLTTKKMFLRPIAEELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD--------------------------------KDG 88
           WF++GD+N+ YL    V IW+EW                                  K G
Sbjct: 61  WFIKGDTNIKYLVDRNVRIWNEWPYEIFKKSEDFHGETLEEFVEKIKELSADDPFVIKYG 120

Query: 89  ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           ELGP+YG QWR++   +   IDQ+S +V SL+ +PYSRRHI+ AWN A +D+MALPPCH 
Sbjct: 121 ELGPVYGRQWRNF---NNEGIDQVSKLVDSLKNNPYSRRHIICAWNPAEVDEMALPPCHS 177

Query: 149 LFQFYV--DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206
             QFYV  D   LSCQLYQRS D FLG+PFNIASY+L T MLA V G++  EFIHT+GD 
Sbjct: 178 FLQFYVSNDQKYLSCQLYQRSADTFLGVPFNIASYALFTAMLAQVCGYEAKEFIHTIGDA 237

Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H+Y +HF+    Q+SR P +L Q+++N ++  +  F  +D  + +Y+ +  ++ KVSV
Sbjct: 238 HIYKDHFDVVKEQMSREPLSLCQLVLNKDVKSIFDFTIDDIKIENYQSYGKLVGKVSV 295


>gi|314933617|ref|ZP_07840982.1| thymidylate synthase [Staphylococcus caprae C87]
 gi|313653767|gb|EFS17524.1| thymidylate synthase [Staphylococcus caprae C87]
          Length = 318

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 141/313 (45%), Positives = 186/313 (59%), Gaps = 51/313 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLW
Sbjct: 7   KAYHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLW 66

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL ++  +IW+EWA ++                                  
Sbjct: 67  FIKGDTNIQYLLKYNNNIWNEWAFENYVNSEDYQGPDMTNFGHRSQEDPEFNEQYKKEMK 126

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVS
Sbjct: 127 KFKERILNDDEFARQYGDLGNVYGKQWRDWEDKDGNHYDQLKTVIEQIKTNPNSRRHIVS 186

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I+ MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 187 AWNPTEIETMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKE 246

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT GD H+Y+NH    + QLSR     P + IN +   +    YED  +  
Sbjct: 247 CGLEVGEFVHTFGDAHIYSNHMSAIETQLSRESYKAPTLQINSD-KSIFDINYEDLEIVD 305

Query: 252 YEPHAAILAKVSV 264
           YE H AI A ++V
Sbjct: 306 YESHPAIKAPIAV 318


>gi|186702039|gb|ACC91331.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 624

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 342 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 401

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 402 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 461

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 462 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 521

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 522 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 581

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 582 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 623


>gi|114053279|ref|NP_001040281.1| thymidylate synthase isoform 1 [Bombyx mori]
 gi|87248619|gb|ABD36362.1| thymidylate synthase isoform 1 [Bombyx mori]
          Length = 298

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 134/284 (47%), Positives = 176/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELL 60
           +QYL L+  +IK G  R DRTGVGT S FG   R+ L +   PLLTTK+V  + V+ ELL
Sbjct: 15  YQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIEELL 74

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS-------- 100
           W + G ++   L   GV IWD    ++            G+LGP+YG QWR         
Sbjct: 75  WMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKYIDC 134

Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+ S++ S++ +P  RR ++ AWN + + KMALPPCHCL QFYV +GKLS
Sbjct: 135 QTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFYVADGKLS 194

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASYSLLT M+A V G+Q GEFIHT GD H+Y NH E   +QL
Sbjct: 195 CLLYQRSADMGLGVPFNIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPLKIQL 254

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P+  P +     I  +  F+YEDF ++ Y+PH  I  +++V
Sbjct: 255 QREPKQFPTLEFARKIESIDDFKYEDFIIKDYKPHPKIEMEMAV 298


>gi|303387989|ref|XP_003072229.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Encephalitozoon intestinalis ATCC 50506]
 gi|303388249|ref|XP_003072359.1| thymidylate synthase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301368|gb|ADM10869.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Encephalitozoon intestinalis ATCC 50506]
 gi|303301498|gb|ADM10999.1| thymidylate synthase [Encephalitozoon intestinalis ATCC 50506]
          Length = 294

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 138/285 (48%), Positives = 185/285 (64%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDL+ H+++ G  R+DRTG GT S FG  MRF L    FPLLTTK+V +K +V ELL
Sbjct: 10  HQYLDLIAHILEKGVKRQDRTGTGTLSIFGASMRFSLEDNTFPLLTTKRVFYKGIVEELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWRSWP------- 102
           +FLR  ++ + L + GV IW +   K           +G+LGPIYG QWR +        
Sbjct: 70  FFLRAQTDSAILEKKGVMIWKKNGSKQFLQSMGLDREEGDLGPIYGFQWRHFGAEYQTSS 129

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  IDQI  +++S++ +P SRR +V AWN   + KMALPPCH LFQF V +GKL+C
Sbjct: 130 SDYKGQGIDQIRDVIESIKNNPESRRMVVCAWNPLALPKMALPPCHVLFQFNVMDGKLNC 189

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRSGD+ LG+PFNIASYSLLT+++A + G + GEF+H LGD H+Y +H +   LQL 
Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTIIIAHLTGLRPGEFVHFLGDAHVYLDHIDSLRLQLQ 249

Query: 222 RSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+PR  P++ +NP     ++  F +EDF L  Y PH  I   +SV
Sbjct: 250 RTPREFPKLFVNPKGTRVEIEDFEFEDFELVGYNPHPPIQMNMSV 294


>gi|6226856|sp|O02604|DRTS_PLAVI RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|2266747|emb|CAA66805.1| dihydrofolate reductase-thymidylate synthetase [Plasmodium vivax]
          Length = 623

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 341 YQYLGIIYDIIMNGNKQGDRTGVGVMSNFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 400

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 401 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 460

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 461 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 520

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 521 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 580

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 581 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 622


>gi|300508797|pdb|3NRR|A Chain A, Co-Crystal Structure Of Dihydrofolate
           Reductase-Thymidylate Synthase From Babesia Bovis With
           Dump, Raltitrexed And Nadp
 gi|300508798|pdb|3NRR|B Chain B, Co-Crystal Structure Of Dihydrofolate
           Reductase-Thymidylate Synthase From Babesia Bovis With
           Dump, Raltitrexed And Nadp
          Length = 515

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 129/281 (45%), Positives = 178/281 (63%), Gaps = 20/281 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+L  V+  G  + +RTG    S FGYQMRFDLS+ FPLLTTKKV  +S++ ELLWF
Sbjct: 234 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 293

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSWP-------- 102
           ++G +N + L    V IW+     ++ DK+G       +LGPIYG QWR +         
Sbjct: 294 IKGSTNGNDLLAKNVRIWELNGRRDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHA 353

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  IDQ++ I+  ++ +P  RR IV +WNV+ + KMALPPCHC FQFYV + KLSC 
Sbjct: 354 DYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 413

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYS+LT M+A V G   GEF+H L D H+Y +H +    Q++R
Sbjct: 414 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 473

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            P   P++ +NP+I ++  F  +D  +  Y  H  I   +S
Sbjct: 474 IPHPFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMS 514


>gi|294655762|ref|XP_002770180.1| DEHA2C06094p [Debaryomyces hansenii CBS767]
 gi|199430584|emb|CAR65545.1| DEHA2C06094p [Debaryomyces hansenii]
          Length = 316

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 131/307 (42%), Positives = 178/307 (57%), Gaps = 44/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
             YLDL   +I  G  R DRTG GT+S F   Q+RF+LS   FPLLTTKKV  ++++HEL
Sbjct: 10  QTYLDLCERIINEGEHRPDRTGTGTKSLFAPPQLRFNLSDDTFPLLTTKKVFSRAIIHEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF++G ++   L   GV IW+    ++            G+LGP+YG QWR +      
Sbjct: 70  LWFVQGCTDAKKLSEKGVKIWEGNGSREYLDSIGLTDRREGDLGPVYGFQWRHFGAEYKD 129

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ+  +++ L+ +PY RR I+SAWN     KMALPPCH   QFYV+    
Sbjct: 130 CDADYSGQGVDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPNE 189

Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
                           KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++    GEFIH
Sbjct: 190 TPDSNTNKQQKTSSRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIH 249

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMII----NPNIVDLLSFRYEDFTLRSYEPHAA 257
           TLGD H+Y +H +    QL R+P+  P++II       I  +  F++EDF +  Y+P+  
Sbjct: 250 TLGDAHVYLDHVDALKEQLVRTPKDFPKLIIKEERKDEIKSIDDFKFEDFEIIGYDPYGP 309

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 310 IKMKMSV 316


>gi|322488320|emb|CBZ23567.1| dihydrofolate reductase-thymidylate synthase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 520

 Score =  333 bits (854), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 126/286 (44%), Positives = 168/286 (58%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIAKEDRTGVGTLSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD    ++             +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENTEMDLGPVYGFQWRHFGAEYRGL 354

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-- 158
             +YDG  +DQI  IV++++A+P  RR + +AWN   + KMALPPCH L QFYV+  K  
Sbjct: 355 EANYDGEGVDQIKFIVETIKANPNDRRLLFTAWNPCALHKMALPPCHLLAQFYVNTEKSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y +H      
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRSHIGALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH AI   ++V
Sbjct: 475 QLERVPHAFPTLVFKEERQFLEDYELMDMEVIDYVPHPAIKMDMAV 520


>gi|22003396|gb|AAM88659.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
          Length = 520

 Score =  333 bits (854), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 128/285 (44%), Positives = 170/285 (59%), Gaps = 23/285 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 235 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 294

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 295 WFLRGETNAXLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 354

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI  IV++++A+P  RR +V+AWN   + KMALPPCH L QFYV  D  +
Sbjct: 355 EANYDGEGVDQIRFIVETIKANPNDRRLLVTAWNPCALQKMALPPCHLLAQFYVNTDTSE 414

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH +    
Sbjct: 415 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVDALKA 474

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           QL R P   P +I       L  +   D  +  Y PH  I  +++
Sbjct: 475 QLERVPHAFPTLIFKAERQFLEDYELTDMEVIDYVPHPPIKMEMA 519


>gi|42519343|ref|NP_965273.1| thymidylate synthase [Lactobacillus johnsonii NCC 533]
 gi|62901341|sp|Q74IU3|TYSY_LACJO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|41583631|gb|AAS09239.1| thymidylate synthase [Lactobacillus johnsonii NCC 533]
          Length = 318

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 179/313 (57%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRFDL+ GFP+LTTKK+ +  +  ELLW
Sbjct: 6   QPYLDLLSKIMSEGHDKEDRTGTGTRSLFGAQMRFDLNDGFPILTTKKIPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L  H   IWDEWA                                     
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVESNEYQGPDMTNFGLRSQQDPEFKRIYQEEMK 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR W   +G  IDQI +++  ++  PYSRR IVS
Sbjct: 126 KFDQKVLEDQTFAEKYGNLGDVYGAQWRHWQKREGGFIDQIQNVIDQIKKTPYSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV++G LS QLYQRSGD+FLG+PFNIASY+LL  ++A  
Sbjct: 186 AWNPEDVPTSALPPCHVLFQFYVNDGCLSLQLYQRSGDMFLGVPFNIASYALLVNLVARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHTLGD H+Y NHF Q    L+RS    P + +NP+   +  F  +D  L +
Sbjct: 246 TGLKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLIN 305

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 306 YRHHGTIKAPVAV 318


>gi|146071663|ref|XP_001463169.1| dihydrofolate reductase-thymidylate synthase [Leishmania infantum]
          Length = 395

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 128/286 (44%), Positives = 170/286 (59%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 110 RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 169

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 170 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 229

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI SIV++++A+P  RR + +AWN   + KMALPPCH L QFYV  D  +
Sbjct: 230 EANYDGEGVDQIRSIVETIKANPNDRRLLFTAWNPCALQKMALPPCHLLAQFYVNTDTSE 289

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH      
Sbjct: 290 LSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRNHVGALKS 349

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R P   P ++       L  +   D  +  Y PH  I  +++V
Sbjct: 350 QLERVPHAFPTLVFKEERQFLEDYELTDMEVIDYVPHPPIKMEMAV 395


>gi|268319281|ref|YP_003292937.1| hypothetical protein FI9785_796 [Lactobacillus johnsonii FI9785]
 gi|262397656|emb|CAX66670.1| thyA [Lactobacillus johnsonii FI9785]
          Length = 318

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 141/313 (45%), Positives = 179/313 (57%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL  ++  G D+ DRTG GTRS FG QMRFDL+ GFP+LTTK++ +  +  ELLW
Sbjct: 6   QPYLDLLSKIMNEGHDKEDRTGTGTRSLFGVQMRFDLNDGFPILTTKEIPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L  H   IWDEWA                                     
Sbjct: 66  FLRGDTNIRFLLEHNNHIWDEWAFKNWVESSDYQGPDMTNFGLRSQEDPEFKKIYQEEMK 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G LG +YG QWR W    G  IDQI +++  ++  PYSRR IVS
Sbjct: 126 KFDEKVLADQTFAEKYGNLGDVYGAQWRHWQKRGGGFIDQIQNVIDQIKTTPYSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   +   ALPPCH LFQFYV++G+LS QLYQRSGD+FLG+PFNIASY+LL  ++A  
Sbjct: 186 AWNPEDVPTSALPPCHVLFQFYVNDGRLSLQLYQRSGDMFLGVPFNIASYALLVNLIACE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEFIHTLGD H+Y NHF Q    L+RS    P + +NP+   +  F  +D  L +
Sbjct: 246 TGLKPGEFIHTLGDAHIYKNHFNQVKELLNRSAYDAPMLWLNPDKKLVQDFEMKDIKLIN 305

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 306 YRHHGTIKAPVAV 318


>gi|330684989|gb|EGG96664.1| thymidylate synthase [Staphylococcus epidermidis VCU121]
          Length = 318

 Score =  333 bits (853), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 143/311 (45%), Positives = 187/311 (60%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   ++  G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILNIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIKYLLQYNNNIWNEWAFENYINSEDYHGPDMTNFGHRSLQDSEFNELYKAEMKKF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN  DQ+ ++++ ++  P SRRHIVSAW
Sbjct: 129 KENILNDDAFAQKYGDLGNVYGKQWRDWEDKDGNHFDQLKTVIEQIKQHPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH +  + QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFVHTFGDAHIYSNHMDAVETQLSRDSFNPPQIKINTD-KSIFDIEYEDIELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|328352748|emb|CCA39146.1| thymidylate synthase [Pichia pastoris CBS 7435]
          Length = 296

 Score =  333 bits (853), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 130/290 (44%), Positives = 175/290 (60%), Gaps = 27/290 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
             YLDL   +IK G  R DRTG GT S F   Q+RF+L  G FPLLTTKK   K ++HEL
Sbjct: 7   QAYLDLCVRIIKEGEHRPDRTGTGTYSLFAPPQLRFNLRDGQFPLLTTKKTFVKGIIHEL 66

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+    ++            G+LGP+YG QWR +      
Sbjct: 67  LWFVEGCTDGKKLSEKGVRIWEGNGSREYLDSLGLKDREVGDLGPVYGFQWRHFGAQYKD 126

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ+S ++++LR +PY RR I+SAWN    +KMALPPCH    FYV     
Sbjct: 127 CKTDYTGQGFDQLSRVIETLRTNPYDRRIIMSAWNPPDFEKMALPPCHVFCHFYVSFPKD 186

Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
              +LSC +YQRS D+ LG+PFN+ASY+LLT M+A V+    G+FIHT+GD H+Y +H +
Sbjct: 187 KKPELSCLMYQRSCDMGLGVPFNVASYALLTKMIAHVVDMDCGDFIHTMGDAHVYLDHVD 246

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +Q  R P+  P + IN N  D+  F++EDF + +Y+PH  I  K+SV
Sbjct: 247 ALKVQAERIPKKFPTLRINTNTKDIDGFKFEDFQIDNYDPHPPIKMKMSV 296


>gi|223043144|ref|ZP_03613191.1| thymidylate synthase [Staphylococcus capitis SK14]
 gi|222443355|gb|EEE49453.1| thymidylate synthase [Staphylococcus capitis SK14]
          Length = 318

 Score =  333 bits (853), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 140/313 (44%), Positives = 185/313 (59%), Gaps = 51/313 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLW
Sbjct: 7   KAYHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLW 66

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           F++GD+N+ YL ++  +IW+EWA ++                                  
Sbjct: 67  FIKGDTNIQYLLKYNNNIWNEWAFENYVNSEDYQGPDMTNFGHRSQEDPEFNEQYKEEMK 126

Query: 88  ----------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                           G+LG +YG QWR W D DGN  DQ+ ++++ ++ +P SRRHIVS
Sbjct: 127 KFKERILNDDEFARQYGDLGNVYGKQWRDWEDKDGNHFDQLKTVIEQIKTNPNSRRHIVS 186

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I+ MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  
Sbjct: 187 AWNPTEIETMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKE 246

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
              + GEF+HT GD H+Y+NH    + QLSR     P + IN +   +    YED  +  
Sbjct: 247 CELEVGEFVHTFGDAHIYSNHMSAIETQLSRESYKAPTLQINSD-KSIFDINYEDLEIVD 305

Query: 252 YEPHAAILAKVSV 264
           YE H AI A ++V
Sbjct: 306 YESHPAIKAPIAV 318


>gi|268568852|ref|XP_002640365.1| Hypothetical protein CBG20269 [Caenorhabditis briggsae]
 gi|187023537|emb|CAP37322.1| hypothetical protein CBG_20269 [Caenorhabditis briggsae AF16]
          Length = 315

 Score =  333 bits (853), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 120/283 (42%), Positives = 174/283 (61%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELLW 61
           +YL  +  +++ GS R DRTG GT S FG Q ++ L     PLLTTK+V+WK V+ ELLW
Sbjct: 33  KYLKQVEQILQEGSRRDDRTGTGTISIFGMQSKYSLRNDTIPLLTTKRVYWKGVLEELLW 92

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G ++   L    V IW++  D            ++G+LGP+YG QWR +        
Sbjct: 93  FISGSTDGKLLMAKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQWRHFGAKYVDCH 152

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  IDQ++ +++ ++ +P SRR I+SAWN + + +M LPPCH + QFYVDNG+LSC
Sbjct: 153 TDYTGQGIDQLAEVIRQIKEEPDSRRIILSAWNPSELGQMVLPPCHTMCQFYVDNGELSC 212

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFN+ASY LLT M+A V G + G  +HTLGD H+Y+NH +    Q+ 
Sbjct: 213 QLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLKAGTLVHTLGDAHVYSNHVDALKTQME 272

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P++    ++  +  F  +   L  Y+ H  I+  ++V
Sbjct: 273 REPYAFPKIRFTRDVSSIDDFTSDMIVLEDYKCHGKIVMDMAV 315


>gi|332016288|gb|EGI57201.1| Thymidylate synthase [Acromyrmex echinatior]
          Length = 513

 Score =  333 bits (853), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 134/284 (47%), Positives = 180/284 (63%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL L+  VI+ G+ + +RT + T S FG QMRF L  G FPLLTTK+V W++V+ ELL
Sbjct: 230 YQYLRLIEKVIQSGAKKSNRTAMDTYSIFGAQMRFSLRDGVFPLLTTKQVFWRAVIEELL 289

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF++G +N   L   G+ IWDE               ++G+LGP+YG QWR +       
Sbjct: 290 WFIKGSTNSKELSDKGIHIWDENGSRAFLDSCDFTDREEGDLGPVYGFQWRHFGAEYKDM 349

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+  ++  ++  P  RR I+SAWN   I KMALPPCH L QFYV+NG+LS
Sbjct: 350 HTDYTGQGIDQLKEVIHKVKHSPEDRRIIISAWNPIDIPKMALPPCHTLVQFYVNNGELS 409

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            QLYQRS D+ LG+PFNIASYSLLT M+A V G + GEF+HT+GD H+Y NH    + Q+
Sbjct: 410 TQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLKPGEFVHTMGDCHVYVNHISALEKQV 469

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I   + D+  F  EDF L  Y P++ +  K++V
Sbjct: 470 KREPREFPKLRIVREVKDIDDFITEDFKLIDYNPYSKLYMKMAV 513


>gi|254572255|ref|XP_002493237.1| Thymidylate synthase, required for de novo biosynthesis of
           pyrimidine deoxyribonucleotides [Pichia pastoris GS115]
 gi|238033035|emb|CAY71058.1| Thymidylate synthase, required for de novo biosynthesis of
           pyrimidine deoxyribonucleotides [Pichia pastoris GS115]
          Length = 298

 Score =  333 bits (853), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 130/290 (44%), Positives = 175/290 (60%), Gaps = 27/290 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
             YLDL   +IK G  R DRTG GT S F   Q+RF+L  G FPLLTTKK   K ++HEL
Sbjct: 9   QAYLDLCVRIIKEGEHRPDRTGTGTYSLFAPPQLRFNLRDGQFPLLTTKKTFVKGIIHEL 68

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+    ++            G+LGP+YG QWR +      
Sbjct: 69  LWFVEGCTDGKKLSEKGVRIWEGNGSREYLDSLGLKDREVGDLGPVYGFQWRHFGAQYKD 128

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G   DQ+S ++++LR +PY RR I+SAWN    +KMALPPCH    FYV     
Sbjct: 129 CKTDYTGQGFDQLSRVIETLRTNPYDRRIIMSAWNPPDFEKMALPPCHVFCHFYVSFPKD 188

Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
              +LSC +YQRS D+ LG+PFN+ASY+LLT M+A V+    G+FIHT+GD H+Y +H +
Sbjct: 189 KKPELSCLMYQRSCDMGLGVPFNVASYALLTKMIAHVVDMDCGDFIHTMGDAHVYLDHVD 248

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              +Q  R P+  P + IN N  D+  F++EDF + +Y+PH  I  K+SV
Sbjct: 249 ALKVQAERIPKKFPTLRINTNTKDIDGFKFEDFQIDNYDPHPPIKMKMSV 298


>gi|224541512|ref|ZP_03682051.1| hypothetical protein CATMIT_00682 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525549|gb|EEF94654.1| hypothetical protein CATMIT_00682 [Catenibacterium mitsuokai DSM
           15897]
          Length = 286

 Score =  333 bits (853), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 139/289 (48%), Positives = 187/289 (64%), Gaps = 34/289 (11%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           + R++++ G DR DRTG GTRS FGYQ R+DL +GFPLLTTKK++ + +  ELLWF++GD
Sbjct: 1   MCRYILEHGEDRPDRTGTGTRSVFGYQTRYDLREGFPLLTTKKMYLRPIAEELLWFIKGD 60

Query: 67  SNVSYLHRHGVSIWDEWA-----------------------------DKDGELGPIYGVQ 97
           +N+ YL    V IW+EW                               K G LGP+YG Q
Sbjct: 61  TNIKYLVDRNVKIWNEWPYEDFKKSEDFNGETLEEFVEKIKNDDDFAKKHGNLGPVYGAQ 120

Query: 98  WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
           WR++   +    DQ+  ++ SL+ +P+SRRHI+SAWN + +D+MALPPCH L QFYV + 
Sbjct: 121 WRNF---NNEGTDQLMKLIDSLKNNPFSRRHIISAWNPSQVDEMALPPCHTLMQFYVSSD 177

Query: 158 K--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
           K  LSCQLYQRS D FLG+PFNIASY+LLT MLA V G++  EFIHT+GD H+Y NHF+ 
Sbjct: 178 KKYLSCQLYQRSADTFLGVPFNIASYALLTCMLAQVCGYEPKEFIHTIGDAHIYKNHFDV 237

Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              Q+ R P  LP++++N +I +L  F+ ED  L  Y+ H  +  KVSV
Sbjct: 238 VKTQIEREPLPLPRLVLNKDIDNLFDFKIEDIKLEGYQSHGPLKGKVSV 286


>gi|146231201|gb|ABQ12770.1| unknown [Shrimp white spot syndrome virus]
          Length = 289

 Score =  333 bits (853), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 133/285 (46%), Positives = 180/285 (63%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL+L+R +++ G  + DRTG GT S FG QMRF L     P+LTTKK+ W+ VV ELL
Sbjct: 5   HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELL 64

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+RG+++   L +  + IW+    ++            G+LGP+YG QWR +       
Sbjct: 65  WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGSQWRHFGAEYDTC 124

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+++I+++LR +P  RR I++AWN   +  MALPPCH   QFYV NG+LS
Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGDV LG+P NIASYSLLT ++AS+ G + GEFI TLGD H+YN H E    QL
Sbjct: 185 CQLYQRSGDVGLGVPSNIASYSLLTHLMASMAGLKPGEFILTLGDAHIYNTHIEVLKKQL 244

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA-ILAKVSV 264
            R PR  P++ I      +  F  + F L  Y+PH+  +  K++V
Sbjct: 245 CRVPRPFPKLRILMAPKKIEDFTIDMFYLEGYQPHSGNLQMKMAV 289


>gi|1674210|gb|AAB96164.1| thymidylate synthase [Mycoplasma pneumoniae M129]
          Length = 328

 Score =  333 bits (853), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 137/293 (46%), Positives = 189/293 (64%), Gaps = 35/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL R+V++ G  R +RT       FGYQM FD+SK FPLLTTKKVHWKS+VHELL
Sbjct: 42  MQQYLDLARYVLEHGKYRPNRTDTAGIGVFGYQMHFDISKHFPLLTTKKVHWKSIVHELL 101

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91
           WF++GD+N+ YL  + V+IW+EW  +                              G LG
Sbjct: 102 WFIKGDTNIKYLVDNKVNIWNEWPYESFKKSPHFNGESQKEFIERIRQDAKFAQQFGNLG 161

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +     N +DQ+  ++  ++ +P+SRR IVS+WN   +D+M LPPCH L+Q
Sbjct: 162 PVYGKQWRDF-----NGVDQLKKVIAQIKVNPFSRRLIVSSWNPNEVDQMLLPPCHSLYQ 216

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV +G+LSCQLYQRSGD+FLGIPFNIASYSLL  ++A     + G F+HT+GD H+Y N
Sbjct: 217 FYVQDGQLSCQLYQRSGDIFLGIPFNIASYSLLVYLVAKETNLKPGSFVHTIGDAHIYEN 276

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ  LQL+R P+ LP++++  +   +  ++++D  L  Y+ H  I  +V+V
Sbjct: 277 HLEQIKLQLTRQPKPLPKVVLKSD-KSIFDYQFDDIELVDYDHHPTIKGEVAV 328


>gi|156084246|ref|XP_001609606.1| dihydrofolate reductase/thymidilate synthase [Babesia bovis]
 gi|256032857|pdb|3I3R|A Chain A, X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE
           SYNTHASE From Babesia Bovis At 2.35a Resolution
 gi|256032858|pdb|3I3R|B Chain B, X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE
           SYNTHASE From Babesia Bovis At 2.35a Resolution
 gi|261278903|pdb|3K2H|A Chain A, Co-Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE
           Synthase From Babesia Bovis With Dump, Pemetrexed And
           Nadp
 gi|261278904|pdb|3K2H|B Chain B, Co-Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE
           Synthase From Babesia Bovis With Dump, Pemetrexed And
           Nadp
 gi|268612472|pdb|3KJR|A Chain A, Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE
           SYN Babesia Bovis Determined Using Slipchip Based
           Microfluidics
 gi|268612473|pdb|3KJR|B Chain B, Crystal Structure Of Dihydrofolate ReductaseTHYMIDYLATE
           SYN Babesia Bovis Determined Using Slipchip Based
           Microfluidics
 gi|154796858|gb|EDO06038.1| dihydrofolate reductase/thymidylate synthase [Babesia bovis]
          Length = 511

 Score =  333 bits (853), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 129/281 (45%), Positives = 178/281 (63%), Gaps = 20/281 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+L  V+  G  + +RTG    S FGYQMRFDLS+ FPLLTTKKV  +S++ ELLWF
Sbjct: 230 QYLDILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWF 289

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDG-------ELGPIYGVQWRSWP-------- 102
           ++G +N + L    V IW+     ++ DK+G       +LGPIYG QWR +         
Sbjct: 290 IKGSTNGNDLLAKNVRIWELNGRRDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHA 349

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  IDQ++ I+  ++ +P  RR IV +WNV+ + KMALPPCHC FQFYV + KLSC 
Sbjct: 350 DYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKMALPPCHCFFQFYVSDNKLSCM 409

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRS D+ LG+PFNIASYS+LT M+A V G   GEF+H L D H+Y +H +    Q++R
Sbjct: 410 MHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIAR 469

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            P   P++ +NP+I ++  F  +D  +  Y  H  I   +S
Sbjct: 470 IPHPFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMS 510


>gi|99030335|gb|ABF61433.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  332 bits (852), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 121/282 (42%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTG G  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGAGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKSVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLENVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617


>gi|17158171|ref|NP_477589.1| wsv067 [Shrimp white spot syndrome virus]
 gi|15021446|gb|AAK77723.1|AF369029_54 ORF54, putative thymidylate synthase [shrimp white spot syndrome
           virus]
 gi|17016465|gb|AAL33071.1| wsv067 [shrimp white spot syndrome virus]
          Length = 289

 Score =  332 bits (852), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 134/285 (47%), Positives = 182/285 (63%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL+L+R +++ G  + DRTG GT S FG QMRF L     P+LTTKK+ W+ VV ELL
Sbjct: 5   HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELL 64

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+RG+++   L +  + IW+    ++            G+LGP+YG QWR +       
Sbjct: 65  WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGFQWRHFGAEYDTC 124

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+++I+++LR +P  RR I++AWN   +  MALPPCH   QFYV NG+LS
Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGDV LG+PFNIASYSLLT ++AS++G + GEFI TLGD H+YN H E    QL
Sbjct: 185 CQLYQRSGDVGLGVPFNIASYSLLTHLMASMVGLKPGEFILTLGDAHIYNTHIEVLKKQL 244

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA-ILAKVSV 264
            R PR  P++ I      +  F  + F L  Y+PH+  +  K++V
Sbjct: 245 CRVPRPFPKLRILMAPEKIEDFTIDMFYLEGYQPHSGNLQMKMAV 289


>gi|239636892|ref|ZP_04677891.1| thymidylate synthase [Staphylococcus warneri L37603]
 gi|239597566|gb|EEQ80064.1| thymidylate synthase [Staphylococcus warneri L37603]
          Length = 318

 Score =  332 bits (852), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 145/311 (46%), Positives = 189/311 (60%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   ++K G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILKIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIKYLLQYNNNIWNEWAFENYINSEDYHGPDMTNFGHRSLQDSEFNELYKAEMKKF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DGN +DQ+ ++++ ++  P SRRHIVSAW
Sbjct: 129 KENILNDDTFAQKYGDLGNVYGKQWRDWEDKDGNHVDQLKTVIEQIKQHPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +  + QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAVETQLSRDSFNPPQIKINTD-KSIFDINYEDIELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|154331155|ref|XP_001562017.1| dihydrofolate reductase-thymidylate synthase [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134059339|emb|CAM37041.1| dihydrofolate reductase-thymidylate synthase [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 521

 Score =  332 bits (851), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 125/286 (43%), Positives = 173/286 (60%), Gaps = 23/286 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVG  S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 236 RQYLELIDRIMKTGIAKEDRTGVGILSLFGAQMRFSLRDNRLPLLTTKRVFWRGVCEELL 295

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD              A+K+ +LGP+YG QWR +       
Sbjct: 296 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTANKEMDLGPVYGFQWRHFGAQYKGF 355

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV--DNGK 158
             +YDG  +DQI SIV++++ +P  RR +++AWN   + +MALPPCH L QFYV  D  +
Sbjct: 356 EANYDGEGVDQIKSIVETIKVNPNDRRLLLTAWNPCALHEMALPPCHLLAQFYVNTDAKE 415

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y NH +   +
Sbjct: 416 LSCMLYQRSCDMGLGVPFNIASYALLTILMAKATGLRPGELVHTLGDAHVYRNHIDALKV 475

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           QL R+P   P ++       L  +   D  +  Y P+  I  +++V
Sbjct: 476 QLERTPNAFPTLVFKREREFLEDYELSDMEVIDYAPYPPIKMEMAV 521


>gi|99030331|gb|ABF61431.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  332 bits (851), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  +  + ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGKIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617


>gi|99082919|gb|ABF66633.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  332 bits (851), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 121/282 (42%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MAL PCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALLPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617


>gi|116617576|ref|YP_817947.1| thymidylate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272223|sp|Q03YZ8|TYSY_LEUMM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116096423|gb|ABJ61574.1| thymidylate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 322

 Score =  332 bits (851), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 133/317 (41%), Positives = 178/317 (56%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + ++  GS + DRTG GTRS FG QMRF+L++GFPLLTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAQKILDEGSHKGDRTGTGTRSLFGTQMRFNLAEGFPLLTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L  H   IWDEW                                      
Sbjct: 66  FLRGDNNIRFLLEHNNHIWDEWAFKKWIESDKYTGPDMTNFGLRSQTDENFAKIYKEQKD 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127
                        ++ G +G +YG  WRSW           +DQ++ ++  ++  P SRR
Sbjct: 126 IFVNNILNDDEFKEEFGYIGNVYGKLWRSWETNSLTAGDETVDQVARLIDQIKETPNSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS Q+YQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSLQMYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ GEFIHT+GD H+YNNH +Q   QLSR    LP++ +NP +  L  +  +D 
Sbjct: 246 VAAQTGYEVGEFIHTIGDTHIYNNHVDQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  Y+   AI A V+V
Sbjct: 306 KILDYDSEPAIKAPVAV 322


>gi|227432568|ref|ZP_03914549.1| thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351676|gb|EEJ41921.1| thymidylate synthase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 322

 Score =  331 bits (850), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 133/317 (41%), Positives = 179/317 (56%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL ++++  GS + DRTG GTRS FG QMRF+L++GFPLLTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAQNILDEGSHKGDRTGTGTRSLFGTQMRFNLAEGFPLLTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L  H   IWDEW                                      
Sbjct: 66  FLRGDNNIRFLLEHNNHIWDEWAFKKWIESDKYTGPDMTNFGLRSQTDENFAKIYKEQKD 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127
                        ++ G +G +YG  WRSW           +DQ++ ++  ++  P SRR
Sbjct: 126 IFVNNILNDDEFKEEFGYIGNVYGKLWRSWETNSLTAGDETVDQVARLIDQIKETPNSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS Q+YQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSLQMYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ GEFIHT+GD H+YNNH +Q   QLSR    LP++ +NP +  L  +  +D 
Sbjct: 246 VAAQTGYEVGEFIHTIGDTHIYNNHVDQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  Y+   AI A V+V
Sbjct: 306 KILDYDSEPAIKAPVAV 322


>gi|295798079|emb|CAX68899.1| Thymidylate synthase [uncultured bacterium]
          Length = 271

 Score =  331 bits (850), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 135/273 (49%), Positives = 177/273 (64%), Gaps = 11/273 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G  + DRTG GT S FGYQ ++DL +GFP+LTTKKV + +VV ELL
Sbjct: 1   MKQYLDLVRDILTHGEKKEDRTGTGTISLFGYQSKYDLRQGFPILTTKKVLFDAVVWELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD---------YDGNVIDQ 111
           WFLRG +N++   +    IW+ WAD  GELGP+YG QWR W           Y    IDQ
Sbjct: 61  WFLRGSTNINDDLKAHTPIWNAWADAQGELGPVYGYQWRKWEKFVWDEKARAYQKKHIDQ 120

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           I+ ++++++ +P SRR IVSAWNV+ ID+MALPPCH  FQFYV NG+L CQLYQRS DV 
Sbjct: 121 ITEVIETIKKNPNSRRLIVSAWNVSDIDRMALPPCHAFFQFYVVNGRLDCQLYQRSADVA 180

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LL  ++A       G F HTLGD H+Y NH +    QL R+P+ L  + 
Sbjct: 181 LGVPFNIASYALLMSLVAKECSLTPGIFTHTLGDAHIYLNHIDGIKQQLERAPKPLALLQ 240

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +      +L  R+ED  L  Y+    I   ++V
Sbjct: 241 L--ACKRVLECRFEDIKLIGYQHDPFIKFPIAV 271


>gi|260950885|ref|XP_002619739.1| thymidylate synthase [Clavispora lusitaniae ATCC 42720]
 gi|238847311|gb|EEQ36775.1| thymidylate synthase [Clavispora lusitaniae ATCC 42720]
          Length = 317

 Score =  331 bits (850), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 133/308 (43%), Positives = 173/308 (56%), Gaps = 45/308 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
             YLDL + +I+ G  R DRTG GTRS F   Q+RFDLS   FPLLTTK+V  K ++HEL
Sbjct: 10  QAYLDLCQKIIEEGEFRPDRTGTGTRSLFAPPQLRFDLSNDTFPLLTTKRVFSKGIIHEL 69

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IW+    ++            G+LGP+YG QWR +      
Sbjct: 70  LWFVEGCTDAKKLSAKGVRIWEGNGSREYLDKMGLTDRREGDLGPVYGFQWRHFGAEYKT 129

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154
              DY G   DQ+  +++ L+ +PY RR I+SAWN     KMALPPCH   QFYV     
Sbjct: 130 CDDDYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFCQFYVSFPQP 189

Query: 155 --------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
                            KLSC LYQRS D+ LG+PFNIASY+LLT M+A V+    GEFI
Sbjct: 190 SSPEPYAPKSTKSQARPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFI 249

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMII----NPNIVDLLSFRYEDFTLRSYEPHA 256
           HTLGD H+Y +H +    QL R+P+  P++ I       I  +  F ++DF +  YEP  
Sbjct: 250 HTLGDAHVYLDHIDALKTQLERTPKQFPKLFIKESRKDEIRSIDDFTFDDFEIVGYEPLP 309

Query: 257 AILAKVSV 264
           AI   +SV
Sbjct: 310 AIKMNMSV 317


>gi|309807223|ref|ZP_07701195.1| thymidylate synthase [Lactobacillus iners LactinV 03V1-b]
 gi|312875520|ref|ZP_07735523.1| thymidylate synthase [Lactobacillus iners LEAF 2053A-b]
 gi|315653456|ref|ZP_07906377.1| thymidylate synthase [Lactobacillus iners ATCC 55195]
 gi|325911481|ref|ZP_08173892.1| thymidylate synthase [Lactobacillus iners UPII 143-D]
 gi|325912868|ref|ZP_08175246.1| thymidylate synthase [Lactobacillus iners UPII 60-B]
 gi|329921037|ref|ZP_08277562.1| thymidylate synthase [Lactobacillus iners SPIN 1401G]
 gi|308166361|gb|EFO68568.1| thymidylate synthase [Lactobacillus iners LactinV 03V1-b]
 gi|311089031|gb|EFQ47472.1| thymidylate synthase [Lactobacillus iners LEAF 2053A-b]
 gi|315489147|gb|EFU78788.1| thymidylate synthase [Lactobacillus iners ATCC 55195]
 gi|325476681|gb|EGC79836.1| thymidylate synthase [Lactobacillus iners UPII 143-D]
 gi|325477861|gb|EGC80995.1| thymidylate synthase [Lactobacillus iners UPII 60-B]
 gi|328935107|gb|EGG31592.1| thymidylate synthase [Lactobacillus iners SPIN 1401G]
          Length = 318

 Score =  331 bits (850), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V +  +  ELLW
Sbjct: 6   QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L  H   IWDEW                                      
Sbjct: 66  FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMK 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       + K G+LG +YG QWR W    G+ IDQ+ ++++ ++ +P SRR IVS
Sbjct: 126 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q + QLSR+    P + +NP    +L F  +D  L  
Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLID 305

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 306 YNHHGTIKAPVAV 318


>gi|309809295|ref|ZP_07703164.1| thymidylate synthase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170408|gb|EFO72432.1| thymidylate synthase [Lactobacillus iners SPIN 2503V10-D]
          Length = 318

 Score =  331 bits (850), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 143/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V +  +  ELLW
Sbjct: 6   QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L  H   IWDEW                                      
Sbjct: 66  FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMK 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       + K G+LG +YG QWR W    G+ IDQ+ ++++ ++ +P SRR IVS
Sbjct: 126 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q + QLSR+    P + +NP    +L F  +D  L  
Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLID 305

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 306 YNHHGTIKAPVAV 318


>gi|302191399|ref|ZP_07267653.1| thymidylate synthase [Lactobacillus iners AB-1]
 gi|309805343|ref|ZP_07699393.1| thymidylate synthase [Lactobacillus iners LactinV 09V1-c]
 gi|309807682|ref|ZP_07701621.1| thymidylate synthase [Lactobacillus iners LactinV 01V1-a]
 gi|312873927|ref|ZP_07733963.1| thymidylate synthase [Lactobacillus iners LEAF 2052A-d]
 gi|308165343|gb|EFO67576.1| thymidylate synthase [Lactobacillus iners LactinV 09V1-c]
 gi|308169056|gb|EFO71135.1| thymidylate synthase [Lactobacillus iners LactinV 01V1-a]
 gi|311090476|gb|EFQ48884.1| thymidylate synthase [Lactobacillus iners LEAF 2052A-d]
          Length = 318

 Score =  331 bits (850), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V +  +  ELLW
Sbjct: 6   QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L  H   IWDEW                                      
Sbjct: 66  FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMN 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       + K G+LG +YG QWR W    G+ IDQ+ ++++ ++ +P SRR IVS
Sbjct: 126 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q + QLSR+    P + +NP    +L F  +D  L  
Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLID 305

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 306 YNHHGTIKAPVAV 318


>gi|259500709|ref|ZP_05743611.1| thymidylate synthase [Lactobacillus iners DSM 13335]
 gi|259168093|gb|EEW52588.1| thymidylate synthase [Lactobacillus iners DSM 13335]
          Length = 329

 Score =  331 bits (849), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 142/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLS+GFP++TTK V +  +  ELLW
Sbjct: 17  QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSEGFPIITTKHVPFGLIKSELLW 76

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L  H   IWDEW                                      
Sbjct: 77  FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMN 136

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       + K G+LG +YG QWR W    G+ IDQ+ ++++ ++ +P SRR IVS
Sbjct: 137 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVS 196

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 197 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 256

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q + QLSR+    P + +NP    +L F  +D  L  
Sbjct: 257 TGLELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLID 316

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 317 YNHHGTIKAPVAV 329


>gi|229593185|ref|YP_002875304.1| thymidylate synthase [Pseudomonas fluorescens SBW25]
 gi|259550806|sp|C3K3Q8|TYSY_PSEFS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|229365051|emb|CAY53232.1| thymidylate synthase [Pseudomonas fluorescens SBW25]
          Length = 277

 Score =  331 bits (849), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 127/277 (45%), Positives = 179/277 (64%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GT++ F  Q R +L+ GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKQYLELLNDVVTNGLTKGDRTGTGTKAVFARQYRHNLADGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L G++N+ +L+ +GV IWDEWA +DG+LGP+YG QW +WP  DG  I+QI  +V +L+
Sbjct: 61  WMLSGNTNIKWLNENGVKIWDEWATEDGDLGPVYGEQWTAWPTKDGGTINQIDYMVHTLK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              K ALPPCH L+Q +V +G LS QLY RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDETKSPQENARNGKQALPPCHLLYQAFVHDGHLSMQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+P+N A+ +LLT MLA        E I T GD H Y+NH EQ   QL+R+P+ L
Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVTTGDTHAYSNHMEQIRTQLARTPKKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+++I      +  +++EDF +  Y+   +I A V++
Sbjct: 241 PELVIKRKPASIYDYKFEDFEIVGYDADPSIKADVAI 277


>gi|309803972|ref|ZP_07698055.1| thymidylate synthase [Lactobacillus iners LactinV 11V1-d]
 gi|308163974|gb|EFO66238.1| thymidylate synthase [Lactobacillus iners LactinV 11V1-d]
          Length = 318

 Score =  331 bits (849), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 143/313 (45%), Positives = 184/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V +  +  ELLW
Sbjct: 6   QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L  H   IWDEW                                      
Sbjct: 66  FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQTDELFNIKYQEQMK 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       + K G+LG +YG QWR W    G+ IDQ+ ++++ ++ +P SRR IVS
Sbjct: 126 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNVIEQIKTNPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHF+Q + QLSR+    P + +NP    +L F  +D  L  
Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFDQVNKQLSRNAYDSPTLWLNPLKHRVLDFEMKDIKLID 305

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 306 YNHHGTIKAPVAV 318


>gi|221053708|ref|XP_002258228.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Plasmodium knowlesi strain H]
 gi|193808061|emb|CAQ38765.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Plasmodium knowlesi strain H]
          Length = 626

 Score =  331 bits (849), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 121/282 (42%), Positives = 180/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L +  V IW+    ++             +LGPIYG QWR +        
Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKIAMEMA 625


>gi|99082907|gb|ABF66627.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  331 bits (849), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMELA 617


>gi|224476558|ref|YP_002634164.1| thymidylate synthase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222421165|emb|CAL27979.1| thymidylate synthase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 317

 Score =  331 bits (848), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 138/313 (44%), Positives = 191/313 (61%), Gaps = 51/313 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             Y DL + +++ G++R DRT  GT S FG+Q+RFDLS+GFPLLTTKKV +K +  EL+W
Sbjct: 6   KAYHDLCKEILEIGNERDDRTHTGTISKFGHQLRFDLSEGFPLLTTKKVSFKLLATELVW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL ++  +IW+EWA                                     
Sbjct: 66  FIKGDTNIKYLLQYNNNIWNEWAFEKYIQSEDYTGPDMTNFGHRALQDLEFNERYQEEMD 125

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                        +K G+LG +YG QWR W   DG   DQ++++++ ++  P SRRHIVS
Sbjct: 126 KFKKKILNDDAFAEKHGDLGNVYGKQWRDWVGADGKHYDQLATVIKQIKKHPTSRRHIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN + ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASYSLLT ++A  
Sbjct: 186 AWNPSEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYSLLTHLVAKE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT GD H+Y+NH +  + QLSR     PQ+ IN +   +   +YED  + +
Sbjct: 246 CGLEVGEFVHTFGDAHIYSNHIDAIEKQLSRDSYAPPQLKINTD-KSIFEIQYEDLEIVN 304

Query: 252 YEPHAAILAKVSV 264
           Y+ H  I A ++V
Sbjct: 305 YQSHPGIKAPIAV 317


>gi|99082909|gb|ABF66628.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  331 bits (848), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREANDLGPIYGFQWRHFGAEYTNMH 455

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLVKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHADSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617


>gi|99082917|gb|ABF66632.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  331 bits (848), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 121/282 (42%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S  GY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKCGYMMKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617


>gi|312871389|ref|ZP_07731484.1| thymidylate synthase [Lactobacillus iners LEAF 3008A-a]
 gi|311093042|gb|EFQ51391.1| thymidylate synthase [Lactobacillus iners LEAF 3008A-a]
          Length = 318

 Score =  331 bits (848), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 184/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V +  +  ELLW
Sbjct: 6   QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L  H   IWDEW                                      
Sbjct: 66  FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQNDELFNIKYQEQMK 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       + K G+LG +YG QWR W    G+ IDQ+ +I++ ++ +P SRR IVS
Sbjct: 126 IFTEKILSDATFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNIIEQIKTNPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHFEQ + QLSR+    P + +NP    +L F  +D  L  
Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFEQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLID 305

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 306 YNHHGTIKAPVAV 318


>gi|310799823|gb|EFQ34716.1| thymidylate synthase [Glomerella graminicola M1.001]
          Length = 325

 Score =  331 bits (848), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 125/304 (41%), Positives = 172/304 (56%), Gaps = 41/304 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R +++ G  R DRTG GT S F    ++F L+K      PLLTTK+V  ++V+
Sbjct: 22  YQYLDLVREILEEGEHRPDRTGTGTYSIFAPAPLKFSLNKNGKPLLPLLTTKRVFLRAVI 81

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102
            ELLWF+ G+++   L   GV IWD    ++            G+LGP+YG QWR +   
Sbjct: 82  AELLWFVEGNTSSLPLSEAGVKIWDGNGSREFLDSVGLSHREVGDLGPVYGFQWRHFGAE 141

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQ++ ++  L+ +PY RR ++SAWN A + KMALPPCH   QFYV  
Sbjct: 142 YVDAKTDYTGQGVDQLAEVIHKLKTNPYDRRILLSAWNPADLKKMALPPCHMFAQFYVSY 201

Query: 156 -------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
                         G L CQLYQRS D+ LG+PFNIASY+LLT M+A       G   H 
Sbjct: 202 PRARSAPADGEKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIARACDLVPGSLTHV 261

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV--DLLSFRYEDFTLRSYEPHAAILA 260
           +GD H+Y +H +   +QL R PR  P + IN       +  +R EDF ++ Y+PH  I  
Sbjct: 262 MGDAHVYADHVDALKVQLEREPRDFPLLEINNREAGCSIDGWRVEDFVVKGYDPHKTIAM 321

Query: 261 KVSV 264
           K+SV
Sbjct: 322 KMSV 325


>gi|73662621|ref|YP_301402.1| thymidylate synthase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123734223|sp|Q49XN8|TYSY_STAS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|72495136|dbj|BAE18457.1| thymidylate synthase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 318

 Score =  331 bits (848), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 140/313 (44%), Positives = 183/313 (58%), Gaps = 51/313 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             Y  L   +++ G  + DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K +  ELLW
Sbjct: 7   QAYHQLCEEILEIGKQKNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLW 66

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           F++GD+N+ YL ++  +IW+EWA                                     
Sbjct: 67  FIKGDTNIKYLLQYNNNIWNEWAFEKFVQSKDYNGPDMTDFGHRAQKDESFNLIYKDEMN 126

Query: 85  -------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                         K G+LG +YG QWR W D  GN  DQ+ +++  ++ +P SRRHIVS
Sbjct: 127 QFKKRILNDDDFAKKYGDLGNVYGKQWRDWEDKYGNHYDQLKTVINQIKTNPNSRRHIVS 186

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASYSLLT ++A  
Sbjct: 187 AWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYSLLTHLIAKE 246

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HT GD H+Y+NH E  + QL+R     P + IN +   +    YED  +  
Sbjct: 247 CGLEVGEFVHTFGDAHIYSNHIEAIETQLARESYNPPTLNINSD-ASIFDIDYEDLEIVD 305

Query: 252 YEPHAAILAKVSV 264
           YE H AI A ++V
Sbjct: 306 YESHPAIKAPIAV 318


>gi|312963676|ref|ZP_07778157.1| Thymidylate synthase [Pseudomonas fluorescens WH6]
 gi|311282185|gb|EFQ60785.1| Thymidylate synthase [Pseudomonas fluorescens WH6]
          Length = 277

 Score =  331 bits (848), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 128/277 (46%), Positives = 179/277 (64%), Gaps = 13/277 (4%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+LL  V+  G  + DRTG GT++ F  Q R +L+ GFPLLTTKK+H+KS+ +EL+
Sbjct: 1   MKQYLELLNDVVTNGLTKGDRTGTGTKAVFARQYRHNLADGFPLLTTKKLHFKSIANELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W L G++N+ +L+ +GV IWDEWA +DG+LGP+YG QW +WP  DG  I+QI  +V +L+
Sbjct: 61  WMLSGNTNIKWLNENGVRIWDEWATEDGDLGPVYGEQWTAWPTKDGGTINQIDYMVHTLK 120

Query: 121 ADPYSRRHIVSAWNVALID-------------KMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +P SRR +   WNV  +              K ALPPCH L+Q +V +G LS QLY RS
Sbjct: 121 TNPNSRRILFHGWNVEYLPDETKSPQENARNGKQALPPCHLLYQAFVHDGHLSMQLYIRS 180

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DVFLG+P+N A+ +LLT MLA        E I T GD H Y+NH EQ   QL+R+P+ L
Sbjct: 181 SDVFLGLPYNTAALALLTHMLAQQCDLIPHEIIVTTGDTHAYSNHMEQIRTQLARTPKKL 240

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+++I      +  +++EDF +  YE   +I A V++
Sbjct: 241 PELVIKRKPESIYDYKFEDFEIVGYEADPSIKADVAI 277


>gi|146412684|ref|XP_001482313.1| thymidylate synthase [Meyerozyma guilliermondii ATCC 6260]
 gi|146393077|gb|EDK41235.1| thymidylate synthase [Meyerozyma guilliermondii ATCC 6260]
          Length = 302

 Score =  331 bits (848), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 132/294 (44%), Positives = 177/294 (60%), Gaps = 31/294 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
             YLDL  H+I  G  R DRTG GT+S F   Q+RFDLS   FPLLTTKKV  K+++HEL
Sbjct: 9   QAYLDLCSHIITHGEHRPDRTGTGTKSVFAPPQLRFDLSNDSFPLLTTKKVFSKAIIHEL 68

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ GD++ ++L   GV IW+    ++            G+LGP+YG QWR +      
Sbjct: 69  LWFVAGDTDANHLSEKGVKIWEGNGSREYLDKLGLTDRRVGDLGPVYGFQWRHFGAQYKT 128

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              +Y G   DQ+  +++ L+ +PY RR I+SAWN     +MALPPCH   QFYV     
Sbjct: 129 CDDNYSGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAQMALPPCHVFCQFYVSFPDA 188

Query: 156 -NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
              KLSC LYQRS D+ LG+PFNIASY+LLT M+A ++    GEFIHT+GD H+YN+H +
Sbjct: 189 GRPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHIVDMDCGEFIHTMGDAHVYNDHID 248

Query: 215 QADLQLSRSPRTLPQMIINPN----IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               QL R+PR  P++ I       I  +  F + DF +  Y+P+  I  K+SV
Sbjct: 249 ALKEQLQRTPREFPKLYIKEERKHQITSIDDFTFSDFEIVDYDPYGPIKMKMSV 302


>gi|294441235|gb|ADE75019.1| dihydrofolate reductase-thymidylate synthase [Plasmodium knowlesi]
          Length = 626

 Score =  330 bits (847), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 121/282 (42%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L +  V IW+    ++             +LGPIYG QWR +        
Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I   ++
Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKISMDMA 625


>gi|312872324|ref|ZP_07732394.1| thymidylate synthase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092147|gb|EFQ50521.1| thymidylate synthase [Lactobacillus iners LEAF 2062A-h1]
          Length = 318

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 184/313 (58%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLL+ ++  G D+ DRTGVGTRS FG QM FDLSKGFP++TTK V +  +  ELLW
Sbjct: 6   QPYLDLLQKIMLEGHDKSDRTGVGTRSIFGAQMHFDLSKGFPIITTKHVPFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L  H   IWDEW                                      
Sbjct: 66  FLRGDTNIKFLLEHKNHIWDEWAFKNWVSSTEYNGPDMTNFGLRQQNDELFNIKYQEQMK 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       + K G+LG +YG QWR W    G+ IDQ+ +I++ ++ +P SRR IVS
Sbjct: 126 IFTEKILSDVTFSKKYGDLGNVYGAQWRRWQTSRGDTIDQLGNIIEQIKTNPDSRRLIVS 185

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN   I  +ALPPCH LFQFYV++ KLS QLYQRSGD+FLG+PFNIASYSLL  ++A  
Sbjct: 186 AWNPEDIPNVALPPCHVLFQFYVNDNKLSLQLYQRSGDMFLGVPFNIASYSLLLNLVARE 245

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHFEQ + QLSR+    P + +NP    +L F  +D  L  
Sbjct: 246 TGLELGEFVHTLGDAHIYKNHFEQVNKQLSRNAYDSPTLWLNPLKHKVLDFEMKDIKLID 305

Query: 252 YEPHAAILAKVSV 264
           Y  H  I A V+V
Sbjct: 306 YNHHGTIKAPVAV 318


>gi|314936430|ref|ZP_07843777.1| thymidylate synthase [Staphylococcus hominis subsp. hominis C80]
 gi|313655049|gb|EFS18794.1| thymidylate synthase [Staphylococcus hominis subsp. hominis C80]
          Length = 318

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K +  ELLWF+
Sbjct: 9   YHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKVSFKLIATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIKYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQKDENFNKMYQQEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D  GN  DQ+ +++Q ++ +P SRRHIVSAW
Sbjct: 129 KEKVLNDDTFAKKYGDLGHVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH E    QLSR     P + IN     +    YED  L  Y+
Sbjct: 249 LEVGEFIHTFGDAHIYSNHIEAIKTQLSRESFAPPTLKINSE-QSIFDINYEDLELVDYQ 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|99030333|gb|ABF61432.1| dihydrofolate reductase-thymidylate synthase [Plasmodium vivax]
          Length = 618

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 120/282 (42%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY ++F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 336 YQYLGIIYDIIMNGNKQGDRTGVGVMSKFGYMVKFNLSEYFPLLTTKKLFLRGIIEELLW 395

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG+++ + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 396 FIRGETDGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 455

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 456 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 515

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 516 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHVDSLKVQLN 575

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I  +++
Sbjct: 576 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKITMEMA 617


>gi|294441233|gb|ADE75018.1| dihydrofolate reductase-thymidylate synthase [Plasmodium knowlesi]
          Length = 626

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 121/282 (42%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 344 YQYLSIIYDIIMNGNKQGDRTGVGVMSKFGYMMKFNLNEYFPLLTTKKLFLRGIIEELLW 403

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L +  V IW+    ++             +LGPIYG QWR +        
Sbjct: 404 FIRGETNGNTLLKKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 463

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +++  ++ +P SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 464 DNYEDKGVDQLKNVIHLIKNEPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 523

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 524 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 583

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP + ++  F   DFT+ +Y  H  I   ++
Sbjct: 584 RIPYPFPTLKLNPEVKNIEDFTISDFTIENYVHHDKISMDMA 625


>gi|19481716|gb|AAL88992.1| WSSV124 [shrimp white spot syndrome virus]
          Length = 289

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 133/285 (46%), Positives = 181/285 (63%), Gaps = 22/285 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL+L+R +++ G  + DRTG GT S FG QMRF L     P+LTTKK+ W+ VV EL 
Sbjct: 5   HQYLNLVREILERGVKKDDRTGTGTLSIFGPQMRFSLRDDTIPVLTTKKIFWRGVVEELS 64

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+RG+++   L +  + IW+    ++            G+LGP+YG QWR +       
Sbjct: 65  WFIRGNTDAKELAKKKIHIWNANGSREFLDSRGLYDRAEGDLGPVYGFQWRHFGAEYDTC 124

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  IDQ+++I+++LR +P  RR I++AWN   +  MALPPCH   QFYV NG+LS
Sbjct: 125 SSDYTGKGIDQLANILKTLRENPDDRRMIMTAWNPMDLHLMALPPCHMTAQFYVANGELS 184

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGDV LG+PFNIASYSLLT ++AS++G + GEFI TLGD H+YN H E    QL
Sbjct: 185 CQLYQRSGDVGLGVPFNIASYSLLTHLMASMVGLKPGEFILTLGDAHIYNTHIEVLKKQL 244

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA-ILAKVSV 264
            R PR  P++ I      +  F  + F L  Y+PH+  +  K++V
Sbjct: 245 CRVPRPFPKLRILMAPEKIEDFTIDMFYLEGYQPHSGNLQMKMAV 289


>gi|152002501|dbj|BAF73525.1| thymidylate synthase [Onion yellows phytoplasma OY-W]
          Length = 288

 Score =  330 bits (846), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 147/293 (50%), Positives = 198/293 (67%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+ YLDL R +++ GS R DRT  GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL
Sbjct: 1   MNTYLDLCRFILQKGSFRNDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD-----------------------------KDGELG 91
           WFL+GD+N+ YL ++ V+IW+EW                               K G LG
Sbjct: 61  WFLKGDTNICYLVQNNVNIWNEWPYQKYQQSAFFQNETLKEFVEKIKNDPLFAIKHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +     N +DQI  ++  ++ +P SRR I+++WN  L+++MALPPCH L Q
Sbjct: 121 PVYGKQWRDF-----NGVDQIKFLISEIKTNPNSRRLILNSWNPPLLNQMALPPCHVLIQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV  GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V   Q  EFIHTLGD H+Y+N
Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H  Q   Q+ R+P+ LPQMI+NP+I ++  F++ DFTL++Y+    +   ++V
Sbjct: 236 HLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFSDFTLQNYQCDGILKGDIAV 288


>gi|39938779|ref|NP_950545.1| thymidylate synthase [Onion yellows phytoplasma OY-M]
 gi|62901327|sp|Q6YQT0|TYSY_ONYPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|39721888|dbj|BAD04378.1| thymidylate synthase [Onion yellows phytoplasma OY-M]
          Length = 288

 Score =  330 bits (846), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 147/293 (50%), Positives = 198/293 (67%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+ YLDL R +++ GS R DRT  GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL
Sbjct: 1   MNTYLDLCRFILQKGSFRNDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD-----------------------------KDGELG 91
           WFL+GD+N+ YL ++ V+IW+EW                               K G LG
Sbjct: 61  WFLKGDTNICYLVQNNVNIWNEWPYQKYQQSAFFQNETLKEFLEKIKNDPLFAIKHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +     N +DQI  ++  ++ +P SRR I+++WN  L+++MALPPCH L Q
Sbjct: 121 PVYGKQWRDF-----NGVDQIKFLISEIKTNPNSRRLILNSWNPPLLNQMALPPCHVLIQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV  GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V   Q  EFIHTLGD H+Y+N
Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H  Q   Q+ R+P+ LPQMI+NP+I ++  F++ DFTL++Y+    +   ++V
Sbjct: 236 HLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFSDFTLQNYQCDGILKGDIAV 288


>gi|229822730|ref|ZP_04448800.1| hypothetical protein GCWU000282_00018 [Catonella morbi ATCC 51271]
 gi|229787543|gb|EEP23657.1| hypothetical protein GCWU000282_00018 [Catonella morbi ATCC 51271]
          Length = 313

 Score =  329 bits (845), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 146/314 (46%), Positives = 185/314 (58%), Gaps = 51/314 (16%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY +L+R ++  G  + DRTGVGT+S FGYQMRFDLS GFP++TTK+V +  +  ELL
Sbjct: 1   MQQYQELVRKILAEGHVKTDRTGVGTKSLFGYQMRFDLSHGFPMVTTKRVPFGLIKSELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFLRGD+NV YL  H   IWDEWA                                    
Sbjct: 61  WFLRGDTNVRYLLEHNNHIWDEWAFKRYVESPDYHGPDMTDFGLRAVADPDFNEIYQQEL 120

Query: 85  --------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                         ++ G LG +YG QWRSWP  +G  +DQIS ++  ++  P SRR IV
Sbjct: 121 AAFNERVLTDDDFAERYGNLGNVYGAQWRSWPLRNGETLDQISQLIDMIKHSPDSRRLIV 180

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH LFQFYV +GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A 
Sbjct: 181 SAWNPEDVPSMALPPCHTLFQFYVYDGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAK 240

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
               + G+F+HTLGD HLY NH E A+  LSR P+ LPQ+ I+ +         +   L+
Sbjct: 241 ECDLEVGDFVHTLGDAHLYLNHLEAAETLLSREPKPLPQLEID-DFEQFDQVSTDQIRLQ 299

Query: 251 SYEPHAAILAKVSV 264
            YEP   I A ++V
Sbjct: 300 GYEPWPTIKAPIAV 313


>gi|167957301|ref|ZP_02544375.1| Thymidylate synthase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 312

 Score =  329 bits (845), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 144/312 (46%), Positives = 185/312 (59%), Gaps = 48/312 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD+LR+V   G  + +RTG GT   FG Q R++L  GFP +TTKK+++ SV HELL
Sbjct: 1   MRQYLDILRYVRNNGIQKSNRTGTGTTEIFGAQTRYNLEDGFPAVTTKKLYFNSVAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA------------------------------------ 84
           WFL+G  N+ YL ++GV IWDEW                                     
Sbjct: 61  WFLKGTGNIEYLAQNGVHIWDEWPYKNYLEKTGQRIPEINGDEWCAGMKQFIGRIATDHA 120

Query: 85  --DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK-- 140
             ++ G+LGP+YGVQWR WPD  G  IDQI + +  ++ +P SRR+IVSAWNVA ID   
Sbjct: 121 FAEEWGDLGPVYGVQWRKWPDGKGGTIDQIQNAIDMIKNNPMSRRNIVSAWNVAEIDDIA 180

Query: 141 --MALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
               LPPCH +FQF V  G      KL   L QRS D+FLG+PFNIASY+LL  M+A V 
Sbjct: 181 RAGGLPPCHTIFQFNVRPGENGEKDKLDLTLTQRSADIFLGVPFNIASYALLLSMIAQVT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G Q GEF+HTL   H+YNNH  Q D QLSR P  LP++ +NP+I ++  F  +D  L  Y
Sbjct: 241 GKQPGEFVHTLNSAHIYNNHRVQVDEQLSRHPLPLPKLWLNPDIKNIDDFTIKDIRLEGY 300

Query: 253 EPHAAILAKVSV 264
           E H+ I A ++V
Sbjct: 301 ESHSPIKAPIAV 312


>gi|161723289|ref|NP_110008.2| thymidylate synthase [Mycoplasma pneumoniae M129]
 gi|2501428|sp|P78029|TYSY_MYCPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|301633474|gb|ADK87028.1| thymidylate synthase [Mycoplasma pneumoniae FH]
          Length = 287

 Score =  329 bits (845), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 137/293 (46%), Positives = 189/293 (64%), Gaps = 35/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL R+V++ G  R +RT       FGYQM FD+SK FPLLTTKKVHWKS+VHELL
Sbjct: 1   MQQYLDLARYVLEHGKYRPNRTDTAGIGVFGYQMHFDISKHFPLLTTKKVHWKSIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91
           WF++GD+N+ YL  + V+IW+EW  +                              G LG
Sbjct: 61  WFIKGDTNIKYLVDNKVNIWNEWPYESFKKSPHFNGESQKEFIERIRQDAKFAQQFGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +     N +DQ+  ++  ++ +P+SRR IVS+WN   +D+M LPPCH L+Q
Sbjct: 121 PVYGKQWRDF-----NGVDQLKKVIAQIKVNPFSRRLIVSSWNPNEVDQMLLPPCHSLYQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV +G+LSCQLYQRSGD+FLGIPFNIASYSLL  ++A     + G F+HT+GD H+Y N
Sbjct: 176 FYVQDGQLSCQLYQRSGDIFLGIPFNIASYSLLVYLVAKETNLKPGSFVHTIGDAHIYEN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ  LQL+R P+ LP++++  +   +  ++++D  L  Y+ H  I  +V+V
Sbjct: 236 HLEQIKLQLTRQPKPLPKVVLKSD-KSIFDYQFDDIELVDYDHHPTIKGEVAV 287


>gi|169351012|ref|ZP_02867950.1| hypothetical protein CLOSPI_01789 [Clostridium spiroforme DSM 1552]
 gi|169292074|gb|EDS74207.1| hypothetical protein CLOSPI_01789 [Clostridium spiroforme DSM 1552]
          Length = 295

 Score =  329 bits (844), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 131/298 (43%), Positives = 186/298 (62%), Gaps = 37/298 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL++ ++V++ G DR DRTG GTRS FGYQ R+DL  GFPL+TTKK+  + +  ELL
Sbjct: 1   MKQYLEMCKYVLENGEDRSDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFIRPIAEELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD--------------------------------G 88
           WF++GD+N+ YL    V IW+EW  ++                                G
Sbjct: 61  WFIKGDTNIKYLVDRNVKIWNEWPYENYKKSKDYQGETIEEFIEKIKNLPEDDSFVLKYG 120

Query: 89  ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           +LGP+YG QWR++   +   +DQ++ +V SL+ DP+SRRHI+ AWN A +D M LPPCH 
Sbjct: 121 DLGPVYGAQWRNF---NYEGVDQLAKLVDSLKNDPFSRRHIICAWNPAQVDNMTLPPCHA 177

Query: 149 LFQFYVDNGK--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206
             QFYV   K  LSCQLYQRS D+FLG+PFNIASY+L+  MLA   G++  EF+HT+GD 
Sbjct: 178 FLQFYVSADKKYLSCQLYQRSADIFLGVPFNIASYALMVEMLARTCGYEAKEFVHTIGDA 237

Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H+Y +HF+    QL R P    ++++NP +  +  ++ ED  +  Y+ +  ++ KVSV
Sbjct: 238 HIYKDHFDVVKQQLERKPLPKCKLVLNPEVKSIFDYKIEDIKIEDYQSYGKLVGKVSV 295


>gi|294441237|gb|ADE75020.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 639

 Score =  329 bits (843), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I ++  F   DFT+ +Y  H  I   ++
Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKIAMDMA 638


>gi|166164543|gb|ABY83770.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
 gi|166164545|gb|ABY83771.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 639

 Score =  329 bits (843), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I ++  F   DFT+ +Y  H  I   ++
Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKITMDMA 638


>gi|166164549|gb|ABY83773.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 641

 Score =  328 bits (842), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 359 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 418

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 419 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 478

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 479 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 538

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 539 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 598

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I ++  F   DFT+ +Y  H  I   ++
Sbjct: 599 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKIAMDMA 640


>gi|242373739|ref|ZP_04819313.1| thymidylate synthase [Staphylococcus epidermidis M23864:W1]
 gi|242348559|gb|EES40161.1| thymidylate synthase [Staphylococcus epidermidis M23864:W1]
          Length = 318

 Score =  328 bits (842), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 139/311 (44%), Positives = 184/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   V++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K +  ELLWF+
Sbjct: 9   YHSLCEEVLEIGNQRDDRTHTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------------------------------ 87
           +GD+N+ YL ++  +IW+EWA ++                                    
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYIQSNDYQGPDMTDFGHRSQQDPEFNELYKEEMKKF 128

Query: 88  --------------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                         G+LG +YG QWR W D DG   DQ+ +++  ++ +P SRRHIVSAW
Sbjct: 129 KQRILNDDDFARQYGDLGNVYGKQWRDWEDKDGRHFDQLKTVIDQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECH 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +  + QL+R     P + IN +   +    YED  +  YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAIETQLARESYQAPTLKINTD-KSIFDINYEDLEVVDYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|50365237|ref|YP_053662.1| thymidylate synthase [Mesoplasma florum L1]
 gi|62901302|sp|Q6F145|TYSY_MESFL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|50363793|gb|AAT75778.1| thymidylate synthase [Mesoplasma florum L1]
          Length = 288

 Score =  328 bits (842), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 132/294 (44%), Positives = 178/294 (60%), Gaps = 36/294 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+  ++K G  R DRT  GT S FG Q R+DL +GFPLLTTKKV +K++ HE+L
Sbjct: 1   MKQYLELVNEILKDGEKREDRTNTGTISKFGVQKRYDLREGFPLLTTKKVFYKAIFHEML 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------------------------ADKDGELG 91
           WF++GD+N+ YL  + V IW+EW                              +K G+LG
Sbjct: 61  WFIKGDTNIKYLVENNVKIWNEWPYENFKKSSEFNNETLQEFVERLKNDNEFCNKWGDLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +       IDQ + ++  ++ +P+SRRHIVSAWN A +D M LPPCH  +Q
Sbjct: 121 PVYGKQWRDF-----GGIDQFAKLINDIKKNPFSRRHIVSAWNPAEVDNMLLPPCHSFWQ 175

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
            YV  +G L  QLYQRSGDVFLG+PFNIASY+LL  ++A     +   F+HT+GD H+Y 
Sbjct: 176 VYVSKDGWLDLQLYQRSGDVFLGVPFNIASYALLMELIAKECNLKARYFVHTIGDAHIYL 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH EQ + QL R P  L ++ IN     +    +ED  +  YE HA I  +V+V
Sbjct: 236 NHLEQINEQLKRKPLPLCKIKINSE-KSIFDIAFEDIEIEGYESHAKITGEVAV 288


>gi|166164547|gb|ABY83772.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
 gi|294441239|gb|ADE75021.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 639

 Score =  328 bits (842), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 357 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 416

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 417 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 476

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 477 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 536

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 537 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 596

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I ++  F   DFT+ +Y  H  I   ++
Sbjct: 597 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKITMDMA 638


>gi|228476137|ref|ZP_04060845.1| thymidylate synthase [Staphylococcus hominis SK119]
 gi|228269960|gb|EEK11440.1| thymidylate synthase [Staphylococcus hominis SK119]
          Length = 318

 Score =  328 bits (841), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 141/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K +  ELLWF+
Sbjct: 9   YHDLCNDILEIGNQRDDRTHTGTISKFGHQIRFDLTKGFPLLTTKKVSFKLIATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIKYLLKYNNNIWNEWAFEKYIQSEDYHGPDMTNFGHRSQKDENFNKMYQQEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D  GN  DQ+ +++Q ++ +P SRRHIVSAW
Sbjct: 129 KEKVLNDDTFAKKYGDLGHVYGKQWRDWVDQYGNHFDQLKTVIQQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH E    QLSR     P + I+     +    YED  L  Y+
Sbjct: 249 LEVGEFIHTFGDAHIYSNHIEAIKTQLSRESFAPPTLKISSE-QSIFDINYEDLELVDYQ 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|19115217|ref|NP_594305.1| thymidylate synthase (predicted) [Schizosaccharomyces pombe 972h-]
 gi|74665572|sp|Q9UTI7|TYSY_SCHPO RecName: Full=Probable thymidylate synthase; Short=TS; Short=TSase
 gi|5725409|emb|CAB52423.1| thymidylate synthase (predicted) [Schizosaccharomyces pombe]
          Length = 625

 Score =  328 bits (841), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 126/295 (42%), Positives = 176/295 (59%), Gaps = 32/295 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKGF-PLLTTKKVHWKSVVHEL 59
            QYL+L+R++++ G  R DRTG GTRS F   Q+RF L     PLLTTK+V  + V+ EL
Sbjct: 331 EQYLNLIRYILENGQSRPDRTGTGTRSVFAPPQLRFSLRNNTLPLLTTKRVFLRGVLEEL 390

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ GD+N ++L   G+ IWD    ++            G+LGPIYG QWR +      
Sbjct: 391 LWFIHGDTNANHLSEKGIHIWDGNGSREFLDSRGLTDRKVGDLGPIYGFQWRHFGAQYVD 450

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY    +DQ++ ++ +L+ +PY RR I+SAWN   I +MALPPCH   QFYV     
Sbjct: 451 CDTDYTNKGVDQLAQVISTLKLNPYDRRIILSAWNPLAIPEMALPPCHIFCQFYVSEPCK 510

Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                +LS  +YQRS D+ LG+PFNIASYSLLT M+A + G++  EF+H +GD H+YN+H
Sbjct: 511 PGGKPQLSSMMYQRSADMGLGVPFNIASYSLLTHMIAHMCGYEAAEFVHVMGDCHIYNDH 570

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL R P+  P++    +  D   + SF  +DF +  Y P+  I  K+SV
Sbjct: 571 LEALQTQLERVPKAFPKLFFKRDAKDIGSIDSFSVDDFAVEGYNPYGPIKMKMSV 625


>gi|209878892|ref|XP_002140887.1| thymidylate synthase family protein [Cryptosporidium muris RN66]
 gi|209556493|gb|EEA06538.1| thymidylate synthase family protein [Cryptosporidium muris RN66]
          Length = 549

 Score =  327 bits (840), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 182/283 (64%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLD+L +V++ G  R +RTG+ T S FG  MRFDL + FPLLTTK V  + +  EL+WF
Sbjct: 267 QYLDMLSNVLQNGHYRENRTGINTYSIFGASMRFDLRESFPLLTTKNVALRIIFEELMWF 326

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++GD+N ++L    V IW     K+             +LGPIYG QWR +         
Sbjct: 327 IKGDTNGNHLLDKKVFIWAGNGSKEYLNKVGLGYREENDLGPIYGFQWRHFNAEYKTMHD 386

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-KLSC 161
           +Y+G  +DQ++++++SL+ +PY RRHI+SAWN + +  MALPPCH L QFYVDN  +LSC
Sbjct: 387 NYNGQGVDQLANLIESLKKNPYDRRHILSAWNPSAVKYMALPPCHILSQFYVDNNNRLSC 446

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASYSLL +M+A + G++ GEFIH +GDVH+Y NH EQ   Q+ 
Sbjct: 447 SLYQRSCDLGLGCPFNIASYSLLCVMIAHICGYEPGEFIHFIGDVHIYENHVEQLKQQIK 506

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  PQ+ +   +  +  F +ED  +  Y PH  I  +++V
Sbjct: 507 RLPRPFPQLRLKRKVDKVEDFIWEDIEIIGYYPHPTIRMEMAV 549


>gi|170017673|ref|YP_001728592.1| thymidylate synthase [Leuconostoc citreum KM20]
 gi|169804530|gb|ACA83148.1| Thymidylate synthase [Leuconostoc citreum KM20]
          Length = 319

 Score =  327 bits (840), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 138/314 (43%), Positives = 178/314 (56%), Gaps = 51/314 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + ++  G  + DRTG GT S FG QMRF+L +GFPLLTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAQKILDEGHLKGDRTGTGTHSLFGSQMRFNLQEGFPLLTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L +H   IWDEW                                      
Sbjct: 66  FLRGDNNIRFLLQHNNHIWDEWAFKNWVSSEEYSGPDMTNFSHRAQEDADFAAAYQAQKA 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDG-NVIDQISSIVQSLRADPYSRRHIV 130
                        +K G +G +YG  WR W    G N IDQ++ +V  ++A P SRR I+
Sbjct: 126 IFVDNILNDDDFMEKFGYIGDVYGKLWRGWETISGENAIDQVNRLVNQIKATPDSRRLIL 185

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           +AWN     +  LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL  M+A+
Sbjct: 186 TAWNAETTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHMVAA 245

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G++ G+FIHT+GD H+YNNH EQ   QLSR    LP++ +NP +  L  +  +D  + 
Sbjct: 246 QTGYEVGDFIHTIGDTHIYNNHIEQITEQLSRPMHHLPKLWLNPEVKSLFDYTMDDIKVL 305

Query: 251 SYEPHAAILAKVSV 264
            YE   AI A V+V
Sbjct: 306 DYESEPAIKAPVAV 319


>gi|315658331|ref|ZP_07911203.1| thymidylate synthase [Staphylococcus lugdunensis M23590]
 gi|315496660|gb|EFU84983.1| thymidylate synthase [Staphylococcus lugdunensis M23590]
          Length = 318

 Score =  327 bits (839), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 143/311 (45%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL   ++  G ++ DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHDLCEDILAIGKNKDDRTQTGTVSKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL +H  +IW+EWA                                       
Sbjct: 69  KGDTNIRYLLQHNNNIWNEWAFEKYIKSSDYHGPDMTNFGHRSLVDDHFKAQYKEEMARF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D  GN  DQ+ ++++ ++  P SRRHI+SAW
Sbjct: 129 KENILIDDAFAKKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIEQIKTHPNSRRHIISAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N A +D MALPPCH +FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPAEVDTMALPPCHTMFQFYVQNGKLSCQLYQRSADIFLGVPFNIASYALLTHLVAKECD 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSRS    P + IN +   +    YED  L +Y+
Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAVHTQLSRSSFEPPTIRINTD-KSIFDISYEDIELINYQ 307

Query: 254 PHAAILAKVSV 264
            HAAI A ++V
Sbjct: 308 SHAAIKAPIAV 318


>gi|70726480|ref|YP_253394.1| thymidylate synthase [Staphylococcus haemolyticus JCSC1435]
 gi|123776140|sp|Q4L6D7|TYSY_STAHJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|68447204|dbj|BAE04788.1| thymidylate synthase [Staphylococcus haemolyticus JCSC1435]
          Length = 318

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 140/311 (45%), Positives = 183/311 (58%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G+ R DRT  GT S FG+Q+RFDLSKGFPLLTTKKV +K +  ELLWF+
Sbjct: 9   YHALCEEILEIGNQRDDRTHTGTFSKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFEKYVQSNDYHGPDMTNFGHRALQDDEFNELYKEEMSKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D +GN  DQ+ ++++ ++  P SRRHIVSAW
Sbjct: 129 KQHILNDDSFAKKYGDLGNVYGKQWRDWVDKEGNHFDQLKTVIEQIKNSPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV +G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQDGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECN 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEF+HT GD H+Y+NH E    QLSR+    P + IN N   +    YED  L  Y 
Sbjct: 249 LEVGEFVHTFGDAHIYSNHIEAIKTQLSRNSFDPPTLKINSN-ASIFDINYEDLELIGYN 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|289550834|ref|YP_003471738.1| Thymidylate synthase [Staphylococcus lugdunensis HKU09-01]
 gi|289180366|gb|ADC87611.1| Thymidylate synthase [Staphylococcus lugdunensis HKU09-01]
          Length = 318

 Score =  327 bits (838), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 144/311 (46%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y DL   ++  G ++ DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHDLCEDILAIGKNKDDRTQTGTVSKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL +H  +IW+EWA                                       
Sbjct: 69  KGDTNIRYLLQHNNNIWNEWAFEKYIKSSDYHGPDMTNFGHRSLVDDHFKAQYKEEMTRF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G+LG +YG QWR W D  GN  DQ+ ++++ ++  P SRRHIVSAW
Sbjct: 129 KENILTDDAFARKYGDLGNVYGKQWRDWVDQYGNHFDQLKTVIEQIKTHPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N A +D MALPPCH +FQFYV NGKLSCQLYQRS D+FLG+PFNIASY+LLT ++A    
Sbjct: 189 NPAEVDTMALPPCHTMFQFYVQNGKLSCQLYQRSADIFLGVPFNIASYALLTHLVAKECD 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSRS    P + IN +   +    YED  L +Y+
Sbjct: 249 LEVGEFIHTFGDAHIYSNHIDAVHTQLSRSSFEPPTIRINTD-KSIFDISYEDIELINYQ 307

Query: 254 PHAAILAKVSV 264
            HAAI A ++V
Sbjct: 308 SHAAIKAPIAV 318


>gi|145567018|gb|ABP81859.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
          Length = 621

 Score =  327 bits (838), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I  +  F   DFT+++Y  H  I   ++
Sbjct: 579 RIPYPFPTLKLNPEIKSIEDFTISDFTIQNYVHHDKITMDMA 620


>gi|145567020|gb|ABP81860.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
          Length = 621

 Score =  326 bits (837), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 459 ANYENKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I ++  F   DFT+++Y  H  I   ++
Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKITMDMA 620


>gi|50548459|ref|XP_501699.1| YALI0C10901p [Yarrowia lipolytica]
 gi|49647566|emb|CAG82008.1| YALI0C10901p [Yarrowia lipolytica]
          Length = 296

 Score =  326 bits (837), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 131/288 (45%), Positives = 175/288 (60%), Gaps = 27/288 (9%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61
           YLDL   VI+ G  R DRTG GT S F   Q+RFDLS    PLLTTK+V ++ V+ ELLW
Sbjct: 9   YLDLCARVIEEGESRDDRTGTGTLSLFAPPQLRFDLSNDILPLLTTKRVFYRGVLEELLW 68

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G ++   L    + IWD    K+            G+LGP+YG QWR +        
Sbjct: 69  FVAGCTDGKKLSEKNIHIWDGNGSKEFLEKAGLGHRREGDLGPVYGFQWRHFGAEYKNCD 128

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-----DN 156
            DY G  +DQ+  ++ +LR +P+ RR I+SAWN A + KMALPPCH   QFYV     + 
Sbjct: 129 TDYTGQGVDQLKQVIHTLRTNPHDRRIILSAWNPADLPKMALPPCHMFCQFYVSYKNSER 188

Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           G+LSCQLYQRS D+ LG+PFNIASY+LLT M+A V     GE IHT+GD H+Y +H +  
Sbjct: 189 GRLSCQLYQRSCDLGLGVPFNIASYALLTRMIAQVTDLDCGELIHTMGDAHVYKDHVDAL 248

Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             Q++R+P   P++    +I D+  F YEDF L  Y+P + I  ++SV
Sbjct: 249 KQQIARTPGQFPKLTFARDIKDIDGFNYEDFVLEGYKPQSKIEMQMSV 296


>gi|209965294|ref|YP_002298209.1| thymidylate synthase [Rhodospirillum centenum SW]
 gi|209958760|gb|ACI99396.1| thymidylate synthase [Rhodospirillum centenum SW]
          Length = 302

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 128/278 (46%), Positives = 175/278 (62%), Gaps = 28/278 (10%)

Query: 15  GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74
           G+ R DRTGVGT + FG QMRFDLS+GFPLLTTK++ +K+ +HELLWFL GD+ +  L +
Sbjct: 25  GARREDRTGVGTLALFGRQMRFDLSRGFPLLTTKRIFYKAAIHELLWFLSGDTRLRPLLQ 84

Query: 75  HGVSIW----------------------------DEWADKDGELGPIYGVQWRSWPDYDG 106
           +GV IW                            D +A + G+LGP+YG QWR+W   DG
Sbjct: 85  NGVRIWTDWPLARYRRETGESIDQETFERRVLEDDAFAARWGDLGPVYGKQWRAWETADG 144

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
            V+DQI+ +V  +R +P SRR + + WNV  +++MALPPCH  +Q++V +G+LS  LYQR
Sbjct: 145 RVVDQIAQLVDGIRGNPTSRRLLFTGWNVGELERMALPPCHMTYQYFVADGRLSGILYQR 204

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S D  LG+P+N+   +LL  MLA     + GE + T  DVHLY NH EQA  QL R PR 
Sbjct: 205 SADTLLGLPWNLCEAALLIHMLAQQCDLEPGELVWTGADVHLYLNHVEQARQQLGREPRP 264

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           LP+++I      L  +R+EDF +  Y+PH  I A+V+V
Sbjct: 265 LPRLVIRRRPESLFGYRFEDFAIEGYDPHPHIRAEVAV 302


>gi|145567022|gb|ABP81861.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
          Length = 621

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 123/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+Y+NH +   +QL+
Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYSNHIDSLKVQLN 578

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I ++  F   DFT+++Y  H  I   ++
Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKITMDMA 620


>gi|166164553|gb|ABY83775.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 637

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 126/282 (44%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 355 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 414

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 415 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 474

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 475 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 534

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 535 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 594

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I ++  F   DFT+ +Y  H  I   ++
Sbjct: 595 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKITMDMA 636


>gi|319400786|gb|EFV89005.1| thymidylate synthase [Staphylococcus epidermidis FRI909]
          Length = 318

 Score =  326 bits (836), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYVQSADYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G LG +YG QWR W D +GN  DQ+ S++Q ++ +P SRRHIVSAW
Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKNNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV  GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRESYLPPQLKINTD-KSIFDINYEDLELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|145567024|gb|ABP81862.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           brasilianum]
          Length = 621

 Score =  326 bits (836), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I ++  F   DFT+++Y  H  I   ++
Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKISMDMA 620


>gi|300172851|ref|YP_003772016.1| thymidylate synthase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887229|emb|CBL91197.1| Thymidylate synthase [Leuconostoc gasicomitatum LMG 18811]
          Length = 322

 Score =  326 bits (836), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 139/317 (43%), Positives = 183/317 (57%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + V+  G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV++  +  ELLW
Sbjct: 6   QQYLDLAKKVLDEGTQKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVYFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L +H   IWDEWA K+                                  
Sbjct: 66  FLRGDNNIRFLLQHNNHIWDEWAFKNWIESDQYTGPDMTNFGHRAQKDTAFALAYKEQKD 125

Query: 88  ----------------GELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127
                           G +G +YG  WR+W       D + IDQ+S +V+ ++ +P SRR
Sbjct: 126 IFVDKILNDDEFMETFGYVGDVYGKLWRNWETSSLTADTDTIDQVSRLVEQIKTNPDSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNAEKTPQAPLPSCHVLSQFYVADGKLSVQLYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ G+F+HT+GD H+YNNH EQ   QLSR    LP++ +NP +  L  +  +D 
Sbjct: 246 VAAQTGYEVGDFVHTIGDTHIYNNHTEQITEQLSRPMHKLPKLWLNPEVKSLFDYTMDDI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  YE   AI A V+V
Sbjct: 306 KVLDYESEPAIKAPVAV 322


>gi|62240520|gb|AAX77434.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
 gi|62240522|gb|AAX77435.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
 gi|145700343|gb|ABP94173.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
 gi|145700345|gb|ABP94174.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
 gi|145700347|gb|ABP94175.1| dihydrofolate reductase-thymidylate synthase [Plasmodium malariae]
          Length = 621

 Score =  326 bits (836), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL ++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 339 YQYLSIIYDIIMNGNKQNDRTGVGVLSKFGYIMKFNLNQYFPLLTTKKLFLRGIIEELLW 398

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 399 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 458

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 459 ANYEDKGVDQLKNIIHLIKNDPTSRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 518

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 519 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKVQLN 578

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I ++  F   DFT+++Y  H  I   ++
Sbjct: 579 RIPYPFPTLKLNPEIKNIEDFTISDFTIQNYVHHDKITMDMA 620


>gi|170586742|ref|XP_001898138.1| thymidylate synthase [Brugia malayi]
 gi|158594533|gb|EDP33117.1| thymidylate synthase, putative [Brugia malayi]
          Length = 306

 Score =  326 bits (836), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 135/283 (47%), Positives = 172/283 (60%), Gaps = 21/283 (7%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61
           +YLD +R+++K G    DRTGVGT S FG    + L  G  P+LTTK+V+WK VV ELLW
Sbjct: 24  KYLDQVRYILKNGERIDDRTGVGTISVFGMHSVYSLRNGVVPVLTTKRVYWKGVVEELLW 83

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------- 102
           F+RGD+N  +L   GV IWD    +            +G+LGPIYG QWR          
Sbjct: 84  FIRGDTNAKHLSEKGVRIWDANGSRQFLDQCGFSDRSEGDLGPIYGFQWRHCGAEYRGMD 143

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    IDQ+S I+  ++ +P+SRR I+SAWNV  +  MALPPCH L QF V NG+LSC
Sbjct: 144 TDYTNQGIDQLSEIIDLIKNEPHSRRIILSAWNVKDLKLMALPPCHTLAQFAVRNGELSC 203

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFN+ASY LLT M+A V G + G   H LGD H+Y NH +    QL 
Sbjct: 204 QLYQRSGDMGLGVPFNLASYGLLTHMIAHVCGLKTGHLCHVLGDAHVYMNHVDALQEQLK 263

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P +    NI  +  F YE   L +Y+P  AI   ++V
Sbjct: 264 RQPRQFPTVRFIGNIKTIDDFTYESIVLENYQPMPAIKMAMAV 306


>gi|326692446|ref|ZP_08229451.1| thymidylate synthase [Leuconostoc argentinum KCTC 3773]
          Length = 322

 Score =  326 bits (835), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 132/317 (41%), Positives = 178/317 (56%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + ++  G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAQKILAEGNLKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L +H   IWDEW                                      
Sbjct: 66  FLRGDNNIRFLLQHNNHIWDEWAFKNWVESNDYTGPDMTNFGHRAETDSEFAAVYQAQKA 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127
                        +K G +G +YG  WR W           +DQ++ +V+ ++  P SRR
Sbjct: 126 IFVDKILNDDAFMEKFGYVGDVYGKLWRGWETSSVTAGTETVDQVARLVEEIKTTPDSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNADTTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ G+F+HT+GD H+YNNH +Q   QLSR    LP++ +NP++  +  +  +D 
Sbjct: 246 MAAQTGYEVGDFVHTIGDTHIYNNHVDQITEQLSRPMHPLPKLWLNPDVKSIFDYTMDDI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  YE  A I A V+V
Sbjct: 306 KVLDYESEAPIKAPVAV 322


>gi|325120559|emb|CBZ56113.1| Bifunctional dihydrofolate reductase-thymidylate synthase, related
           [Neospora caninum Liverpool]
          Length = 690

 Score =  326 bits (835), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 135/334 (40%), Positives = 178/334 (53%), Gaps = 72/334 (21%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL+  +I  G+   DRTGVG  S FG  MRF L K FPLLTTK+V WK V+ ELLWF
Sbjct: 357 QYLDLIADIINNGATMDDRTGVGVISKFGCTMRFSLDKAFPLLTTKRVFWKGVLEELLWF 416

Query: 63  LRGDSNVSYLHRHGVS-------------------------------------------- 78
           +RGD+N ++L   GV                                             
Sbjct: 417 IRGDTNANHLSEKGVKASLQAPLLSFRLLRRLGAFLRGVTPPRLHAYIECTRLSSRPSAA 476

Query: 79  -----IWDEWADKD------------GELGPIYGVQWRSWP--------DYDGNVIDQIS 113
                IWD+   ++            G++GP YG QWR +         DY G  +DQ+ 
Sbjct: 477 FAGPRIWDKNVTREFLDSRNLSHREVGDIGPGYGFQWRHFGATYKDMHTDYTGQGVDQLK 536

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSCQLYQRSGDVFL 172
            ++  LR +P  RR +++AWN A +D+MALPPCH L QFYV+N + LSC +YQRS DV L
Sbjct: 537 KVINMLRTNPTDRRMLMTAWNPAALDEMALPPCHLLCQFYVENDRDLSCVMYQRSCDVGL 596

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G+PFNIASYSLLT+M+A V   +  EFIH +G+ H+Y+NH E    QL R PR  P + I
Sbjct: 597 GVPFNIASYSLLTLMVAHVCNLKPKEFIHFMGNTHVYSNHVEALKEQLRREPRPFPIVNI 656

Query: 233 --NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                I ++  F  EDF +  Y PH  I  +++V
Sbjct: 657 LNKERIQEIDDFTAEDFEVVGYVPHGRIQMEMAV 690


>gi|295692816|ref|YP_003601426.1| thymidylate synthase [Lactobacillus crispatus ST1]
 gi|295030922|emb|CBL50401.1| Thymidylate synthase [Lactobacillus crispatus ST1]
          Length = 303

 Score =  326 bits (835), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 137/303 (45%), Positives = 175/303 (57%), Gaps = 50/303 (16%)

Query: 12  IKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSY 71
           +  G D+ DRTG GTRS FG QMRFDL++GFPLLTTKKV +  +  ELLWFLRGD+N+ +
Sbjct: 1   MTEGHDKDDRTGTGTRSYFGAQMRFDLTQGFPLLTTKKVPFGLIKSELLWFLRGDTNIRF 60

Query: 72  LHRHGVSIWDEWADKD-------------------------------------------- 87
           L  H   IWDEWA K+                                            
Sbjct: 61  LLEHNNHIWDEWAFKNWIESAEYQGPDMTNFGLRSQSDPEFNQVYQAEMRKFNQRILDDP 120

Query: 88  ------GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
                 G LG +YG QWR W    G  IDQI+ +++ ++  P SRR IV+AWN   +   
Sbjct: 121 AFAQKYGNLGDVYGAQWRHWEKRTGGFIDQIADVIKQIKETPDSRRMIVTAWNPEDVPTS 180

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
           ALPPCH +FQFYV +GK+S QLYQRSGD+FLG+PFNIASYSLL  M+A   G + GEF+H
Sbjct: 181 ALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYSLLLNMIARETGLKVGEFVH 240

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
           TLGD H+Y NHF Q    LSR+P   P++ +NP    +  F  +D  + +Y+ H  I A 
Sbjct: 241 TLGDAHIYRNHFSQVKELLSRTPYDSPELWLNPEKKHIEDFEMKDIKVLNYQHHGTIKAP 300

Query: 262 VSV 264
           V+V
Sbjct: 301 VAV 303


>gi|222086396|ref|YP_002544930.1| thymidylate synthase protein [Agrobacterium radiobacter K84]
 gi|254790227|sp|B9JH03|TYSY_AGRRK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|221723844|gb|ACM27000.1| thymidylate synthase protein [Agrobacterium radiobacter K84]
          Length = 307

 Score =  326 bits (835), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 132/301 (43%), Positives = 174/301 (57%), Gaps = 38/301 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLDL+ H+++ G  R DRTGVGT S  G  MRFDLSKG  P+ TTK+V+WK  V E+L
Sbjct: 7   YQYLDLMAHLLENGDRRIDRTGVGTLSGLGAMMRFDLSKGQLPVFTTKRVYWKLAVKEML 66

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL GD+N+  L +  V IW +W                             +  G+LGP
Sbjct: 67  WFLTGDTNIRNLLKQNVRIWTDWPLAAYRKATGEAISQEDFEARILADEAFAETWGDLGP 126

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W D DG V DQI++++  LR +P SRR I  AWNV  +  MALPPCH ++QF
Sbjct: 127 VYGKQWRQWRDADGQVHDQIATVIDQLRHNPSSRRMIFHAWNVGELAGMALPPCHMVYQF 186

Query: 153 YVDN---------GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           +V N          +LS  +YQRS D+FLG PFNI   ++L  M+A  +    GE +   
Sbjct: 187 HVSNLPSPGETKRPRLSLMVYQRSCDLFLGNPFNICQQAVLLAMVAQQVDMDVGELVWAG 246

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           GDVH+Y NH +    QLSR PR  P + +      +  +R EDF +  YEPHAAI A+V+
Sbjct: 247 GDVHIYLNHLDAIREQLSREPRPFPTLRLLRRPDSIDDYRIEDFEVSDYEPHAAIAAEVA 306

Query: 264 V 264
           V
Sbjct: 307 V 307


>gi|242242714|ref|ZP_04797159.1| thymidylate synthase [Staphylococcus epidermidis W23144]
 gi|242233850|gb|EES36162.1| thymidylate synthase [Staphylococcus epidermidis W23144]
          Length = 318

 Score =  326 bits (835), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYVQSNDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G LG +YG QWR W D +GN  DQ+ S++Q ++ +P SRRHIVSAW
Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKNNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV  GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRESYLPPQLKINTD-KSIFDINYEDLELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|22788864|ref|NP_690528.1| thymidylate synthase [Heliothis zea virus 1]
 gi|20452159|gb|AAM22072.1|AF264019_1 thymidylate synthase [Heliothis zea virus 1]
          Length = 291

 Score =  326 bits (835), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 126/284 (44%), Positives = 176/284 (61%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL+ +R +I+ G+ R DRT VGT S FG   R+ L     PLLTTK V  K V+ ELL
Sbjct: 8   HQYLNTIRSIIETGNRRMDRTKVGTLSHFGVMHRYSLRDNSLPLLTTKTVFVKGVIEELL 67

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRS-------- 100
           W + G +N   L R GV IW   + +            +G+LGP+YG QWR         
Sbjct: 68  WMISGSTNAKELSRKGVHIWSGNSSRSVLDSLGFTDRQEGDLGPVYGFQWRHSGTKYVDC 127

Query: 101 WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ+ +I+ +L+ +P  RR ++ +WN A + +MALPPCHCL QFY  +GKLS
Sbjct: 128 ETDYSGQGVDQLQTIIDTLKTNPTDRRIVMCSWNPADLHQMALPPCHCLAQFYSYDGKLS 187

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C +YQRS D+ LG+PFNIASYS+LT M+A + G +  EF+HT+GD H+Y NH E   +QL
Sbjct: 188 CLMYQRSADMGLGVPFNIASYSMLTHMIAHITGLKAHEFVHTIGDAHVYLNHIEPLKVQL 247

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++     + ++ SF+YEDF ++ Y+P+  I   ++V
Sbjct: 248 EREPRPFPKLEFARKVENIDSFKYEDFIIKGYDPYPKIPMVLAV 291


>gi|15829009|ref|NP_326369.1| thymidylate synthase [Mycoplasma pulmonis UAB CTIP]
 gi|25091481|sp|Q98Q31|TYSY_MYCPU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|14089953|emb|CAC13711.1| THYMIDYLATE SYNTHASE (TS) (TSASE) [Mycoplasma pulmonis]
          Length = 286

 Score =  325 bits (833), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 136/293 (46%), Positives = 184/293 (62%), Gaps = 36/293 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L+ V++ G  + +RT V T S FGYQMRFDLSKGFPL+TTKK ++ ++ HELL
Sbjct: 1   MKQYLDFLKWVLEKGKHKENRTSVDTISAFGYQMRFDLSKGFPLVTTKKTNFSAIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91
           WF++GD+N+ YL  + V+IW++W                               K G LG
Sbjct: 61  WFIKGDTNIKYLVDNKVNIWNQWPYESYKKSQDFQSESLKEFIQKIKDDNEFAQKHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +       IDQ+  +++ ++ +P SRR IVS+WN + ID M LPPCH LFQ
Sbjct: 121 PVYGKQWRDFL-----GIDQLKKVIEQIKNNPNSRRLIVSSWNPSEIDTMLLPPCHTLFQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV++ KLSC LYQRS D FLGIPFNIASY+LLT +LA     + G+F+H++GD H+Y N
Sbjct: 176 FYVNDNKLSCHLYQRSADAFLGIPFNIASYALLTFLLAQETNLEVGDFVHSIGDAHIYVN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ   QL R+P+ LP++II     ++    +ED  L  YE    I  +V+V
Sbjct: 236 HLEQVKTQLKRNPKELPKLIIKN--KNIFEINFEDIELVDYEFDPIIKGEVAV 286


>gi|324519207|gb|ADY47314.1| Thymidylate synthase [Ascaris suum]
          Length = 312

 Score =  325 bits (833), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 128/284 (45%), Positives = 168/284 (59%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            +YL  ++H+I  G    DRTGVGT S FG    + L  G  PLLTTK+V+WK VV ELL
Sbjct: 29  RKYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEELL 88

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF++GD++   L   GV IWD    ++            G+LGPIYG QWR +       
Sbjct: 89  WFIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYHGT 148

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ++ +++ ++ +P SRR I++AWNV  + +MALPPCH L QF V NG+LS
Sbjct: 149 DADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVRNGELS 208

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGD+ LG+PFN+ASY LLT M+A V   + G   H LGD H+Y NH +    QL
Sbjct: 209 CQLYQRSGDMGLGVPFNLASYGLLTHMIAHVCALKTGFLHHVLGDAHVYLNHIDALKEQL 268

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           SR PR  P +     I  +  F  E   L  Y P A I   ++V
Sbjct: 269 SRDPRPFPTVHFEGRIDSIDDFTAESIILNGYNPMAPIKMPMAV 312


>gi|136615|sp|P13100|TYSY_PNECA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|7767148|pdb|1CI7|A Chain A, Ternary Complex Of Thymidylate Synthase From Pneumocystis
           Carinii
 gi|7767149|pdb|1CI7|B Chain B, Ternary Complex Of Thymidylate Synthase From Pneumocystis
           Carinii
 gi|14488434|pdb|1F28|A Chain A, Crystal Structure Of Thymidylate Synthase From
           Pneumocystis Carinii Bound To Dump And Bw1843u89
 gi|14488435|pdb|1F28|B Chain B, Crystal Structure Of Thymidylate Synthase From
           Pneumocystis Carinii Bound To Dump And Bw1843u89
 gi|14488436|pdb|1F28|C Chain C, Crystal Structure Of Thymidylate Synthase From
           Pneumocystis Carinii Bound To Dump And Bw1843u89
 gi|14488437|pdb|1F28|D Chain D, Crystal Structure Of Thymidylate Synthase From
           Pneumocystis Carinii Bound To Dump And Bw1843u89
 gi|169430|gb|AAA33802.1| thymidylate synthase [Pneumocystis carinii]
          Length = 297

 Score =  325 bits (833), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 130/291 (44%), Positives = 180/291 (61%), Gaps = 28/291 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYL+L++++I  G DR DRTG GT S F    ++F L    FPLLTTK+V  + V+ EL
Sbjct: 7   QQYLNLVQYIINHGEDRPDRTGTGTLSVFAPSPLKFSLRNKTFPLLTTKRVFIRGVIEEL 66

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+RG+++   L    + IWD    ++            G+LGPIYG QWR +      
Sbjct: 67  LWFIRGETDSLKLREKNIHIWDANGSREYLDSIGLTKRQEGDLGPIYGFQWRHFGAEYID 126

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              +Y G  +DQ+++I+Q +R  PY RR I+SAWN A ++KMALPPCH   QFYV     
Sbjct: 127 CKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALPPCHMFCQFYVHIPSN 186

Query: 156 --NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
               +LSCQLYQRS D+ LG+PFNIASY+LLT M+A V     G+FIH +GD H+Y +H 
Sbjct: 187 NHRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVMGDCHIYKDHI 246

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           E    QL+RSPR  P + +N +I D+  F  +DF +++Y P+  I  K+S+
Sbjct: 247 EALQQQLTRSPRPFPTLSLNRSITDIEDFTLDDFNIQNYHPYETIKMKMSI 297


>gi|169784213|ref|XP_001826568.1| thymidylate synthase [Aspergillus oryzae RIB40]
 gi|238508715|ref|XP_002385543.1| thymidylate synthase [Aspergillus flavus NRRL3357]
 gi|83775313|dbj|BAE65435.1| unnamed protein product [Aspergillus oryzae]
 gi|220688435|gb|EED44788.1| thymidylate synthase [Aspergillus flavus NRRL3357]
          Length = 333

 Score =  325 bits (833), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 132/305 (43%), Positives = 173/305 (56%), Gaps = 42/305 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 29  HQYLNLIRTILASGEYRPDRTGTGTRSIFAPPQLRFSLSKPAPNPADDPIPVLPLLTTKR 88

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++VV ELLWF+ G ++   L   GV IWD    ++            G+LGP+YG Q
Sbjct: 89  VFLRAVVAELLWFISGCTSSLPLSDQGVKIWDGNGSREFLDKVGLDHREVGDLGPVYGFQ 148

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ +V  L+ +P+ RR I+SAWN A + KMALPPCH  
Sbjct: 149 WRHFGAEYVDAKTDYTGQGVDQLAEVVHKLKNNPFDRRIIMSAWNPADLKKMALPPCHMF 208

Query: 150 FQFYVD-------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
            QFYV         G L CQLYQRS DV LG+PFNIASY+LLT M+A  +    G F+H 
Sbjct: 209 AQFYVSYPNGQDQKGHLHCQLYQRSCDVALGVPFNIASYALLTHMIAHAVDLHPGTFVHA 268

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAIL 259
           +GD H+Y +H E    QL R P   P++ I  +      +  ++ EDF +  Y PH AI 
Sbjct: 269 MGDTHVYLDHVEPLQEQLVREPTEFPELKIRRDDRGSGVVDGWKPEDFEVVGYNPHKAIK 328

Query: 260 AKVSV 264
            K+SV
Sbjct: 329 MKMSV 333


>gi|330719294|ref|ZP_08313894.1| thymidylate synthase [Leuconostoc fallax KCTC 3537]
          Length = 324

 Score =  325 bits (833), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 133/319 (41%), Positives = 176/319 (55%), Gaps = 56/319 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + +++ G+ + DRTG GTRS FG QMRF+L +GFP+LTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAKTILETGTHKSDRTGTGTRSLFGAQMRFNLQEGFPILTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L ++   IWDEW                                      
Sbjct: 66  FLRGDNNIRFLLQNNNHIWDEWAFKNWVTSSEYTGPDMTDFGLRAQSDPEFNQIYQEQKS 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGN------VIDQISSIVQSLRADPYS 125
                        +K G +G +YG  WR W + D          DQI +++  ++  P S
Sbjct: 126 LFVDKILNDDDFMEKFGYIGEVYGKLWRDWENQDPMDQNATLHTDQIQNLIDGIKTTPDS 185

Query: 126 RRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLT 185
           RR IVSAWN        LP CH L QFYV +GKLS QLYQRS D+FLG+PFNIASYSLL 
Sbjct: 186 RRLIVSAWNAGSTPNAPLPSCHVLSQFYVADGKLSAQLYQRSADIFLGVPFNIASYSLLI 245

Query: 186 MMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYE 245
            M+A+  G+  G+F+HTLGD H+YNNH  Q + QLSR    LP++ +NP +  +  +  +
Sbjct: 246 HMIAAQTGYAVGDFVHTLGDAHIYNNHVAQIETQLSRPMHPLPKLWLNPEVKSIFDYTMD 305

Query: 246 DFTLRSYEPHAAILAKVSV 264
           D  L  Y    AI A V+V
Sbjct: 306 DIKLIDYTSEPAIKAPVAV 324


>gi|241762107|ref|ZP_04760190.1| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|283856542|ref|YP_163490.2| thymidylate synthase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|59803072|sp|Q9Z671|TYSY_ZYMMO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|241373357|gb|EER62957.1| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|283775549|gb|AAV90379.2| Thymidylate synthase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 296

 Score =  324 bits (832), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 127/293 (43%), Positives = 177/293 (60%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL L+  +++ G  R DRTGVGT S FG  MRFDLSKG  P+LTTKKV ++  + E+L
Sbjct: 4   HQYLRLVSDILEKGDQRHDRTGVGTLSLFGAMMRFDLSKGRIPILTTKKVSYRLAIREML 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL GD+N+  L   GVSIW +W                              K G+LGP
Sbjct: 64  WFLSGDTNIRPLVEQGVSIWSDWPLARYQAETGALLSKKEFEAKILADTEFAKKWGDLGP 123

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG V DQI++++++L+++P SRR +   WNVA +  MALPPCH ++Q+
Sbjct: 124 VYGRQWRRWQGSDGQVYDQIATLIETLKSNPSSRRMLFHGWNVAELKDMALPPCHMVYQY 183

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS DVFLG+PFN+   + L  MLA   G   G+ + T GDVH+Y N
Sbjct: 184 HVTSDGRLNSLLYQRSADVFLGLPFNLVGAAALQAMLADQAGLALGDLVWTGGDVHIYRN 243

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +Q   QL+R PR  P++ +  +   +  ++ EDF +  Y+PH  I   V+V
Sbjct: 244 HIDQMKEQLAREPRAFPRLELTRHPNSITDYKIEDFAITGYDPHPPIKGAVAV 296


>gi|260753698|ref|YP_003226591.1| thymidylate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258553061|gb|ACV76007.1| thymidylate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 296

 Score =  324 bits (832), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 128/293 (43%), Positives = 178/293 (60%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL L+  +++ G  R DRTGVGT S FG  MRFDLSKG  P+LTTKKV ++  + E+L
Sbjct: 4   HQYLRLVSDILEKGDQRHDRTGVGTLSLFGAMMRFDLSKGRIPILTTKKVSYRLAIREML 63

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL GD+N+  L   GVSIW +W                              K G+LGP
Sbjct: 64  WFLSGDTNIRPLVEQGVSIWSDWPLARYQAETGALLSKKEFEAKILADTEFAKKWGDLGP 123

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG V DQI++++++L+++P SRR +   WNVA +  MALPPCH ++Q+
Sbjct: 124 VYGRQWRRWQGSDGQVYDQIATLIETLKSNPSSRRMLFHGWNVAELKDMALPPCHMVYQY 183

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS DVFLG+PFN+   + L  MLA   G   G+ + T GDVH+Y N
Sbjct: 184 HVTSDGRLNSLLYQRSADVFLGLPFNLVGAAALQAMLADQAGLALGDLVWTGGDVHIYRN 243

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +Q   QL+R PRT P++ +  +   +  ++ EDF +  Y+PH  I   V+V
Sbjct: 244 HIDQMKEQLAREPRTFPRLELMRHPNSITDYKIEDFAITGYDPHPPIKGAVAV 296


>gi|317495262|ref|ZP_07953632.1| thymidylate synthase [Gemella moribillum M424]
 gi|316914684|gb|EFV36160.1| thymidylate synthase [Gemella moribillum M424]
          Length = 310

 Score =  324 bits (832), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 138/313 (44%), Positives = 190/313 (60%), Gaps = 56/313 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            +YL+L + +++ G  + DRTGVGT+S FGYQM+FDL+KGFPLLTTKK+++  V  ELLW
Sbjct: 4   KEYLNLCKTILENGITKDDRTGVGTKSIFGYQMKFDLNKGFPLLTTKKINFNLVWSELLW 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ +L  +  +IW+EW                                      
Sbjct: 64  FIKGDTNIKFLLENKNNIWNEWAFKKWIESEEYTGPDMTDFGHRVLKDKDFAEEYKKQMN 123

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
                       + K G+LG +YG QWR++     N IDQ+ ++++ ++ +P SRR IVS
Sbjct: 124 IFKENILNDDNFSTKFGDLGNVYGKQWRNF-----NGIDQLKNVIEQIKINPSSRRLIVS 178

Query: 132 AWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           AWN + +D MALPPCH +FQFYV +GKLSCQLYQRS DVFLG+PFNIASYSLLT+++A  
Sbjct: 179 AWNPSEVDTMALPPCHTMFQFYVSDGKLSCQLYQRSADVFLGVPFNIASYSLLTILIAKE 238

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G + GEF+HTLGD H+Y NHFEQ   Q+SR    LP + +N     + +    D  L  
Sbjct: 239 CGLEVGEFVHTLGDAHIYVNHFEQVKEQMSRDAFKLPSLRLN-EFDSIFNLEISDVELID 297

Query: 252 YEPHAAILAKVSV 264
           YE H  I A ++V
Sbjct: 298 YESHPFIKAPIAV 310


>gi|166164551|gb|ABY83774.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 641

 Score =  324 bits (831), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 177/282 (62%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 359 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 418

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 419 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 478

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++  P SRR I+ AW V  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 479 DNYENKGIDQLKNIINLIKNVPTSRRIILCAWYVKDLDKMALPPCHILCQFYIFDGKLSC 538

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 539 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 598

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP I ++  F   DFT+ +Y  H  I   ++
Sbjct: 599 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHDKISMDMA 640


>gi|197294226|ref|YP_001798767.1| thymidylate synthase [Candidatus Phytoplasma australiense]
 gi|171853553|emb|CAM11419.1| Thymidylate synthase [Candidatus Phytoplasma australiense]
          Length = 288

 Score =  324 bits (831), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 142/293 (48%), Positives = 195/293 (66%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLDL R ++K G ++ DRT  GT+S FGYQMRF+L  GFPLLTTKK+++K+++HELL
Sbjct: 1   MKTYLDLCRFILKKGFNKEDRTKTGTKSVFGYQMRFNLQDGFPLLTTKKMYFKAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91
           WFL+GD+N+SYL ++ V+IW++W  +                              G LG
Sbjct: 61  WFLKGDTNISYLVKNNVNIWNDWPYQKYQKSPHFKNETMEEFIQKIKKDKAFAGLHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +     N  DQI  ++  ++ +P SRR I+S+WN   + +M LPPCH L Q
Sbjct: 121 PVYGKQWRDF-----NGFDQIKFLISEIKNNPDSRRLILSSWNPEQLHQMVLPPCHILMQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV  GKLS QLYQRSGDVFLG+PFNIASY+LL +M+A V   + GEFIHTLGD H+Y+N
Sbjct: 176 FYVLEGKLSLQLYQRSGDVFLGVPFNIASYALLLLMVAQVTNLEVGEFIHTLGDAHIYHN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H  Q  +Q+ R+P+ LPQMI+NP+I D+  F +EDFTL++Y     +   +++
Sbjct: 236 HLNQIKIQIQRTPKKLPQMILNPHIKDIDGFSFEDFTLKNYFCDGTLKGDIAI 288


>gi|118937|sp|P20712|DRTS_PLACH RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|160266|gb|AAA29587.1| dihydrofolate reductase/thymidylate synthase [Plasmodium chabaudi]
          Length = 583

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 127/282 (45%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 301 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLSEYFPLLTTKKLFVRGIIEELLW 360

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 361 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 420

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    +DQ+ +I+  ++ DP  RR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 421 ADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 480

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH E   +QL+
Sbjct: 481 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHVESLKVQLN 540

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R+P   P + +NP I ++  F   DFT+++Y  H  I   ++
Sbjct: 541 RTPYPFPTLKLNPEIKNIEDFTISDFTVQNYVHHDKISMDMA 582


>gi|85057710|ref|YP_456626.1| thymidylate synthase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123738900|sp|Q2NJ46|TYSY_AYWBP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|84789815|gb|ABC65547.1| thymidylate synthase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 288

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 147/293 (50%), Positives = 199/293 (67%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M+ YLDL R + + GS R+DRT  GT+S FGYQMRF+L +GFPLLTTKK++ +S++HELL
Sbjct: 1   MNTYLDLCRFIFQKGSFRKDRTNTGTKSVFGYQMRFNLEEGFPLLTTKKMNLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91
           WFL+GD+N+ YL ++ V+IW+EW                               K G LG
Sbjct: 61  WFLKGDTNIFYLVQNNVNIWNEWPYQKYQQSDFFQNETLKEFVKKIKNDPLFATKHGNLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +     N +DQI  ++  ++A+P SRR I+++WN +L+++MALPPCH L Q
Sbjct: 121 PVYGKQWRDF-----NGVDQIKFLISEIKANPNSRRLILNSWNPSLLNQMALPPCHVLIQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV  GKLS QLYQRSGDVFLGIPFNIASYSLL MM+A V   Q  EFIHTLGD H+Y+N
Sbjct: 176 FYVHQGKLSLQLYQRSGDVFLGIPFNIASYSLLLMMVAQVTNLQPYEFIHTLGDAHIYSN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H  Q   Q+ R+P+ LPQMI+NP+I ++  F++ DF L++Y+    +   ++V
Sbjct: 236 HITQVQTQIQRTPKKLPQMILNPDIKNIDDFKFIDFILKNYQCDGILKGDIAV 288


>gi|329731575|gb|EGG67937.1| thymidylate synthase [Staphylococcus epidermidis VCU144]
          Length = 318

 Score =  323 bits (829), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 144/311 (46%), Positives = 186/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G LG +YG QWR W D +GN  DQ+ +++Q ++ +P SRRHIVSAW
Sbjct: 129 KERILNNDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKTVIQQIKNNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N A ID MALPPCH +FQFYV  GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPAEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLNINTD-KSIFDINYEDLELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|222151325|ref|YP_002560481.1| thymidylate synthase [Macrococcus caseolyticus JCSC5402]
 gi|222120450|dbj|BAH17785.1| thymidylate synthase [Macrococcus caseolyticus JCSC5402]
          Length = 316

 Score =  323 bits (829), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 140/312 (44%), Positives = 190/312 (60%), Gaps = 52/312 (16%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +Y +LL+ +++ G D+ DRT  GT S FG+QMRFDLSKGFPLLTTKKV +K V  EL+WF
Sbjct: 7   EYHNLLKLILETGKDKDDRTNTGTLSVFGHQMRFDLSKGFPLLTTKKVSFKLVATELIWF 66

Query: 63  LRGDSNVSYLHRHGVSIWDEW--------------------------------------- 83
           +RGD+N+ YL  +  +IW+EW                                       
Sbjct: 67  IRGDTNIRYLLEYNNNIWNEWAFLKWIESDEYMGPDMTDFGHRALRDPEFNEQYREQLNI 126

Query: 84  -----------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
                        + G+LG +YG QWR +   D  V DQ+  +++ ++++P+SRRHIVSA
Sbjct: 127 FKEKILTDDDFMQRFGDLGNVYGKQWRQFETKD-RVTDQLKEVIEQIKSNPHSRRHIVSA 185

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   I+ MALPPCH +FQFYV++ KLSCQLYQRS DVFLG+PFNIASYSLLT ++A   
Sbjct: 186 WNPGEIESMALPPCHTMFQFYVNDNKLSCQLYQRSADVFLGVPFNIASYSLLTHLVAREC 245

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + GEFIH++GD H+Y+NH E  + QL RS    P++ IN +  D+ +  YED  +  Y
Sbjct: 246 GLEVGEFIHSMGDAHIYSNHIEAVETQLMRSSYEAPKLQINND-KDIFNIEYEDLEIIDY 304

Query: 253 EPHAAILAKVSV 264
             H AI A ++V
Sbjct: 305 TAHPAIKAPIAV 316


>gi|27468038|ref|NP_764675.1| thymidylate synthase [Staphylococcus epidermidis ATCC 12228]
 gi|33416238|ref|NP_877984.1| thymidylate synthase [Staphylococcus aureus]
 gi|42761440|ref|NP_976285.1| thymidylate synthase [Staphylococcus epidermidis]
 gi|57866926|ref|YP_188580.1| thymidylate synthase [Staphylococcus epidermidis RP62A]
 gi|57867484|ref|YP_189147.1| thymidylate synthase [Staphylococcus epidermidis RP62A]
 gi|221142630|ref|ZP_03567123.1| thymidylate synthase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|226464437|ref|YP_002790944.1| thymidylate synthase [Staphylococcus aureus]
 gi|227519931|ref|ZP_03949980.1| thymidylate synthase [Enterococcus faecalis TX0104]
 gi|251810861|ref|ZP_04825334.1| thymidylate synthase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876133|ref|ZP_06285000.1| thymidylate synthase [Staphylococcus epidermidis SK135]
 gi|282929387|ref|ZP_06336949.1| thymidylate synthase [Staphylococcus aureus A9765]
 gi|293366599|ref|ZP_06613276.1| thymidylate synthase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|302344744|ref|YP_003813114.1| thymidylate synthetase [Staphylococcus aureus]
 gi|59800406|sp|P0A0M5|TYSY_STAAU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901169|sp|Q5HMP6|TYSY_STAEQ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|82583715|sp|P0C0M5|TYSY_STAES RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|27315583|gb|AAO04717.1|AE016747_214 thymidylate synthase [Staphylococcus epidermidis ATCC 12228]
 gi|1762089|gb|AAC18954.1| ThyE [Staphylococcus epidermidis]
 gi|3676410|gb|AAC63226.1| thymidylate synthetase ThyE [Staphylococcus aureus]
 gi|13383308|dbj|BAB39485.1| thymidylate synthetase [Staphylococcus epidermidis]
 gi|33390922|gb|AAQ17128.1| thymidylate synthase [Staphylococcus aureus]
 gi|57637584|gb|AAW54372.1| thymidylate synthase [Staphylococcus epidermidis RP62A]
 gi|57638142|gb|AAW54930.1| thymidylate synthase [Staphylococcus epidermidis RP62A]
 gi|226434324|emb|CAR62446.1| thymidylate synthase ThyE [Staphylococcus aureus]
 gi|227072621|gb|EEI10584.1| thymidylate synthase [Enterococcus faecalis TX0104]
 gi|251805541|gb|EES58198.1| thymidylate synthase [Staphylococcus epidermidis BCM-HMP0060]
 gi|270299881|gb|ACZ68687.1| Thymidylate synthase [Staphylococcus aureus]
 gi|270300524|gb|ACZ69330.1| thymidylate synthase [Staphylococcus aureus]
 gi|281295158|gb|EFA87685.1| thymidylate synthase [Staphylococcus epidermidis SK135]
 gi|281334254|gb|ADA61338.1| Thymidylate synthase [Staphylococcus aureus]
 gi|282166683|gb|ADA80699.1| Thymidylate synthase [Staphylococcus aureus]
 gi|282591819|gb|EFB96873.1| thymidylate synthase [Staphylococcus aureus A9765]
 gi|291319368|gb|EFE59737.1| thymidylate synthase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|300492218|gb|ADK23693.1| thymidylate synthetase [Staphylococcus aureus]
 gi|302751821|gb|ADL65998.1| thymidylate synthase, ThyA_1 [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|329735174|gb|EGG71466.1| thymidylate synthase [Staphylococcus epidermidis VCU045]
 gi|329737184|gb|EGG73438.1| thymidylate synthase [Staphylococcus epidermidis VCU028]
          Length = 318

 Score =  323 bits (829), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 144/311 (46%), Positives = 185/311 (59%), Gaps = 51/311 (16%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L   +++ G+ R DRT  GT S FG+Q+RFDL+KGFPLLTTKKV +K V  ELLWF+
Sbjct: 9   YHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFI 68

Query: 64  RGDSNVSYLHRHGVSIWDEWA--------------------------------------- 84
           +GD+N+ YL ++  +IW+EWA                                       
Sbjct: 69  KGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKF 128

Query: 85  -----------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
                       K G LG +YG QWR W D +GN  DQ+ S++Q ++ +P SRRHIVSAW
Sbjct: 129 KERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAW 188

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   ID MALPPCH +FQFYV  GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A   G
Sbjct: 189 NPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECG 248

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
            + GEFIHT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE
Sbjct: 249 LEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYE 307

Query: 254 PHAAILAKVSV 264
            H AI A ++V
Sbjct: 308 SHPAIKAPIAV 318


>gi|302415413|ref|XP_003005538.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Verticillium albo-atrum VaMs.102]
 gi|261354954|gb|EEY17382.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Verticillium albo-atrum VaMs.102]
          Length = 326

 Score =  323 bits (829), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 126/307 (41%), Positives = 172/307 (56%), Gaps = 44/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56
           HQYLDL+R+++  G  R DRTG GT S F    ++F L++      PLLTTK+V  ++VV
Sbjct: 20  HQYLDLVRNILDNGEHRPDRTGTGTYSIFAPTPLKFSLNQNGEPLLPLLTTKRVFLRAVV 79

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-- 102
            ELLWF++G ++   L   G+ IWD                ++G+LGP+YG QWR +   
Sbjct: 80  AELLWFVQGSTSSIPLSEAGIKIWDGNGSREFLDSVGLSHREEGDLGPVYGFQWRHFGAE 139

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQ++ IV  L+ +PY RR I+SAWN A + KMALPPCH   QFYV  
Sbjct: 140 YVDAKTDYTGQGVDQLAEIVHKLKTNPYDRRIILSAWNPAHLKKMALPPCHMFAQFYVSY 199

Query: 156 -----------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
                             G L CQLYQRS D+ LG+PFNIASY+LLT M+A       G 
Sbjct: 200 PRAKRGNAAVVDAEEKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIARACDLVPGS 259

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAA 257
             H +GD H+Y +H +  + QL R PR  P + +      D+  ++ EDF ++ Y+PH  
Sbjct: 260 LTHVMGDAHVYLDHVDALETQLEREPRAFPLLEMTREAGCDIDGWKAEDFVVKGYDPHKT 319

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 320 IAMKMSV 326


>gi|300871809|ref|YP_003786682.1| thymidylate synthase [Brachyspira pilosicoli 95/1000]
 gi|300689510|gb|ADK32181.1| thymidylate synthase [Brachyspira pilosicoli 95/1000]
          Length = 266

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 138/266 (51%), Positives = 181/266 (68%), Gaps = 2/266 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
           M  YL+LL+ V++ G D +DRTGVGTR  F  Q+RF       P++TTK+V  K V+ EL
Sbjct: 1   MKNYLELLKKVLEEGEDTKDRTGVGTRRIFAPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           LWFL+G +N+ +L  + V IWDEWAD  GELGP+YG QWR+W   +GN IDQIS++V +L
Sbjct: 61  LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNVVNTL 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNI 178
           R +P SRR+I++AWNV  IDKM LPPCH + QF+V+N G +   LYQRS D+FLG+PFNI
Sbjct: 121 RNNPTSRRNILNAWNVGEIDKMHLPPCHMMCQFFVNNEGGIITHLYQRSADLFLGVPFNI 180

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           +SY++LT +LA   G +  E I T GD H+YNNH EQ  LQLSR P      +      +
Sbjct: 181 SSYAILTRLLAMHSGLKASELIMTFGDAHIYNNHMEQVKLQLSREPYEQTTELFIEERPN 240

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           + S  YEDF L  Y+ H  I A+V+V
Sbjct: 241 IFSHVYEDFRLEGYKYHPTIKAEVAV 266


>gi|289466115|gb|ADC94828.1| dihydrofolate reductase-thymidylate synthase [Plasmodium billbrayi]
          Length = 608

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 126/282 (44%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIIMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 445

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAEFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607


>gi|289466117|gb|ADC94829.1| dihydrofolate reductase-thymidylate synthase [Plasmodium billbrayi]
          Length = 599

 Score =  322 bits (827), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 126/282 (44%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 318 YQYLNIIYDIIMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 377

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 378 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 437

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 438 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 497

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 498 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAEFIHVLGNAHVYNNHIDSLKIQLN 557

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 558 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 599


>gi|6686065|sp|O96650|TYSY_ASCSU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|4039148|gb|AAC97507.1| thymidylate synthase [Ascaris suum]
          Length = 294

 Score =  322 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 128/284 (45%), Positives = 168/284 (59%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            +YL  ++H+I  G    DRTGVGT S FG    + L  G  PLLTTK+V+WK VV ELL
Sbjct: 11  RKYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF++GD++   L   GV IWD    ++            G+LGPIYG QWR +       
Sbjct: 71  WFIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYHGT 130

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY G  +DQ++ +++ ++ +P SRR I++AWNV  + +MALPPCH L QF V NG+LS
Sbjct: 131 DADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVKNGELS 190

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGD+ LG+PFN+ASY LLT M+A V   + G   H LGD H+Y NH +    QL
Sbjct: 191 CQLYQRSGDMGLGVPFNLASYGLLTHMIAHVCALKTGFLHHVLGDAHVYLNHIDALKEQL 250

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           SR PR  P +     I  +  F  E   L  Y P A I   ++V
Sbjct: 251 SRDPRPFPTVHFEGRIDSIDDFTAESIILNGYNPMAPIKMPMAV 294


>gi|312210825|emb|CBX90911.1| similar to thymidylate synthase [Leptosphaeria maculans]
          Length = 353

 Score =  322 bits (826), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 135/307 (43%), Positives = 173/307 (56%), Gaps = 44/307 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRS-TFGYQMRFDLSK-----------GFPLLTTKK 49
           +QYL L+R ++  G  R DRTG GT +  F  QM+F LSK             PLLTTK+
Sbjct: 47  YQYLSLIREILTNGEHRPDRTGTGTYAAPFPPQMKFALSKPSSDPSQPPIPILPLLTTKR 106

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD                ++GELGP+YG Q
Sbjct: 107 VFLRAVIGELLWFVAGSTHSKPLSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGFQ 166

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  IDQI+ I+  L+  PY RR I+SAWN A I KMALPPCH  
Sbjct: 167 WRHFGAEYKGHDADYTGQGIDQIAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHMF 226

Query: 150 FQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            QFYV             G L   LYQRS D+ LG+PFNIASY+LLT MLA V     G 
Sbjct: 227 AQFYVSFPGHKQGQERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPGT 286

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAA 257
           F HT+GD H+Y +H E   LQL R PR  P++ IN  I   +  ++ +DF +  Y+PHA+
Sbjct: 287 FTHTMGDAHVYADHVEALKLQLQREPREFPELKINREIGGSIDGWKADDFEVVGYKPHAS 346

Query: 258 ILAKVSV 264
           I  K+SV
Sbjct: 347 IAMKMSV 353


>gi|70952417|ref|XP_745378.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Plasmodium chabaudi chabaudi]
 gi|56525682|emb|CAH78219.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Plasmodium chabaudi chabaudi]
          Length = 498

 Score =  322 bits (826), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 127/282 (45%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+F+LS+ FPLLTTKK+  + ++ ELLW
Sbjct: 216 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLSEYFPLLTTKKLFVRGIIEELLW 275

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 276 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 335

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY    +DQ+ +I+  ++ DP  RR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 336 ADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 395

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH E   +QL+
Sbjct: 396 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHVESLKVQLN 455

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R+P   P + +NP I ++  F   DFT+++Y  H  I   ++
Sbjct: 456 RTPYPFPTLKLNPEIKNIEDFTISDFTVQNYVHHDKISMDMA 497


>gi|323342122|ref|ZP_08082355.1| thymidylate synthase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464547|gb|EFY09740.1| thymidylate synthase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 289

 Score =  322 bits (826), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 146/294 (49%), Positives = 196/294 (66%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL++ + V+  GS R DRTG GT   FGYQMRFDLSKGFPLLTTKKVH+ S+  ELL
Sbjct: 1   MKNYLEMCQFVLDEGSRREDRTGTGTTGVFGYQMRFDLSKGFPLLTTKKVHFPSLAKELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA-----------------------------DKDGELG 91
           WF+ GD+N+ +L  + V IW+EW                               K GELG
Sbjct: 61  WFVSGDTNIKWLVENKVRIWNEWPYELFKKSDDYNGETMDEFIARIVADDLFAQKYGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR +       +DQI++++++++ +PYSRR I+SAWN   +D+MALPPCH   Q
Sbjct: 121 PVYGKQWRDF-----GGVDQINNVIETIKTNPYSRRIIMSAWNPTEVDQMALPPCHAFMQ 175

Query: 152 FYV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           FYV ++ KLS QLYQRS DVFLG+PFNIASY+LL  M+A V   + GEF+HT GD+H+YN
Sbjct: 176 FYVSNDRKLSLQLYQRSADVFLGVPFNIASYALLLHMIAKVCDLEVGEFVHTFGDLHIYN 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H++   +QL+R P++LPQ+II+ N   +  F++EDF +  Y+PH  I AKVSV
Sbjct: 236 DHYDAVQMQLAREPKSLPQLIIHGNQEKITDFKFEDFEVVGYDPHPLIKAKVSV 289


>gi|322639437|gb|EFY36125.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
          Length = 220

 Score =  322 bits (826), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 128/220 (58%), Positives = 167/220 (75%)

Query: 45  LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY 104
           +TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  
Sbjct: 1   MTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTP 60

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           DG  IDQI++++  L+ DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLY
Sbjct: 61  DGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLY 120

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DVFLG+PFNIASY+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR P
Sbjct: 121 QRSCDVFLGLPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREP 180

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R LP+++I      L  +R++DF +  Y+PH  I A V++
Sbjct: 181 RALPKLVIKRKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 220


>gi|259483658|tpe|CBF79227.1| TPA: hypothetical protein similar to thymidylate synthase (Broad)
           [Aspergillus nidulans FGSC A4]
          Length = 674

 Score =  322 bits (825), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 127/310 (40%), Positives = 174/310 (56%), Gaps = 47/310 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F    MRF LSK             PLLTTK+
Sbjct: 365 HQYLNLIRQILAEGEHRPDRTGTGTRSIFAPNPMRFSLSKPSPTNPSTKIPILPLLTTKR 424

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG Q
Sbjct: 425 VFLRAVLAELLWFISGSTSSIPLSEAGIKIWDGNGSREFLDKVGLSHREVGDLGPVYGFQ 484

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ IV+ ++  P+ RR I+SAWN A + KMALPPCH  
Sbjct: 485 WRHFGAEYVDAHTDYTGQGVDQLADIVRKIKETPFDRRIIMSAWNPADLKKMALPPCHMF 544

Query: 150 FQFYVD------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
            Q+YV              G+LSC LYQRS D+ LG+PFNIASY+LLT ++A       G
Sbjct: 545 AQYYVSYPEGIEDGKGKGKGELSCLLYQRSCDMGLGVPFNIASYALLTHIIAHATDLNPG 604

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEP 254
           + IHT+GD H+Y +H E  + QL+R P   P++ I         +  ++ E+F +  Y P
Sbjct: 605 KLIHTMGDAHVYLDHVEALEEQLTREPTDFPELKIKREDRGSGVIDGWKEEEFEVIGYAP 664

Query: 255 HAAILAKVSV 264
           H AI  K+SV
Sbjct: 665 HKAIKMKMSV 674


>gi|67541729|ref|XP_664632.1| hypothetical protein AN7028.2 [Aspergillus nidulans FGSC A4]
 gi|40742484|gb|EAA61674.1| hypothetical protein AN7028.2 [Aspergillus nidulans FGSC A4]
          Length = 654

 Score =  322 bits (825), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 127/310 (40%), Positives = 174/310 (56%), Gaps = 47/310 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F    MRF LSK             PLLTTK+
Sbjct: 345 HQYLNLIRQILAEGEHRPDRTGTGTRSIFAPNPMRFSLSKPSPTNPSTKIPILPLLTTKR 404

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG Q
Sbjct: 405 VFLRAVLAELLWFISGSTSSIPLSEAGIKIWDGNGSREFLDKVGLSHREVGDLGPVYGFQ 464

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ IV+ ++  P+ RR I+SAWN A + KMALPPCH  
Sbjct: 465 WRHFGAEYVDAHTDYTGQGVDQLADIVRKIKETPFDRRIIMSAWNPADLKKMALPPCHMF 524

Query: 150 FQFYVD------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
            Q+YV              G+LSC LYQRS D+ LG+PFNIASY+LLT ++A       G
Sbjct: 525 AQYYVSYPEGIEDGKGKGKGELSCLLYQRSCDMGLGVPFNIASYALLTHIIAHATDLNPG 584

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEP 254
           + IHT+GD H+Y +H E  + QL+R P   P++ I         +  ++ E+F +  Y P
Sbjct: 585 KLIHTMGDAHVYLDHVEALEEQLTREPTDFPELKIKREDRGSGVIDGWKEEEFEVIGYAP 644

Query: 255 HAAILAKVSV 264
           H AI  K+SV
Sbjct: 645 HKAIKMKMSV 654


>gi|290972164|ref|XP_002668828.1| predicted protein [Naegleria gruberi]
 gi|284082356|gb|EFC36084.1| predicted protein [Naegleria gruberi]
          Length = 535

 Score =  321 bits (824), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 126/286 (44%), Positives = 182/286 (63%), Gaps = 24/286 (8%)

Query: 3   QYLDLLRH-VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           QYLD+++  ++   + R +RTGVGT S FGYQM++ L    FPLLTTK+V WK V  EL 
Sbjct: 250 QYLDIIKELILSDINVREERTGVGTVSKFGYQMKYSLRNNVFPLLTTKRVFWKGVAKELF 309

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF+ G +N   L    + IWD                ++ +LGP+YG QWR W       
Sbjct: 310 WFISGSTNAKILSEQDIHIWDGNGSREYLDSLGFENREEMDLGPVYGFQWRHWGSSYENM 369

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GK 158
             DY    +DQ+   +++L+ +P +RR I+SAWNV+ +  MALPPCH + QF+VD    +
Sbjct: 370 HTDYTNKGVDQLKKCIETLKNNPTNRRIILSAWNVSDLPNMALPPCHLMCQFWVDTDTNE 429

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           LSCQ+YQRS D+ LG+PFNIASY+LLT ++A V   + G+FIHTLGD H+Y NH E    
Sbjct: 430 LSCQMYQRSCDMGLGVPFNIASYALLTRLMAQVCNLKPGDFIHTLGDTHVYKNHIEPLKK 489

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Q+ R P+  P ++++P+I ++  F++E  TL++YEPHA I  +++V
Sbjct: 490 QIERDPKHFPLLLLDPSITNIDDFKFEHLTLQNYEPHATIKMEMAV 535


>gi|312077491|ref|XP_003141327.1| thymidylate synthase [Loa loa]
 gi|307763509|gb|EFO22743.1| thymidylate synthase [Loa loa]
          Length = 305

 Score =  321 bits (824), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 132/284 (46%), Positives = 170/284 (59%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
           ++YLD +RH++K G    DRTGVGT S FG    + L  G  P+LTTK+V+WK VV ELL
Sbjct: 22  NKYLDQIRHILKNGERIDDRTGVGTISVFGMHSVYSLRNGVVPVLTTKRVYWKGVVEELL 81

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102
           WF+RGD+N  +L   GV IWD    +            +G+LGP+YG QWR         
Sbjct: 82  WFIRGDTNAKHLSEKGVRIWDANGSRQFLDQCGFNDRSEGDLGPVYGFQWRHCGAEYRGM 141

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             DY    IDQ+S I+  ++ +P+SRR I+SAWNV  +  M LPPCH L QF V N +LS
Sbjct: 142 DADYTNRGIDQLSEIIDLIKNEPHSRRIILSAWNVKDLKLMVLPPCHTLAQFAVRNDELS 201

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRSGD+ LG+PFN+ASY LLT M+A + G + G   H LGD H+Y NH +    QL
Sbjct: 202 CQLYQRSGDMGLGVPFNLASYGLLTHMIAHICGLKAGYLCHVLGDAHVYVNHVDALQEQL 261

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PRT P +    NI  +  F YE   L +Y P   I   ++V
Sbjct: 262 RRQPRTFPTVRFVGNIKTIDDFTYESIILENYRPMPTIKMAMAV 305


>gi|124505475|ref|XP_001351479.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Plasmodium falciparum 3D7]
 gi|1655965|gb|AAC53680.1| dihydrofolate reductase-thymidylate synthase [synthetic construct]
 gi|23498237|emb|CAD49208.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Plasmodium falciparum 3D7]
 gi|156067086|gb|ABU43153.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|156067088|gb|ABU43154.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|156067090|gb|ABU43155.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|156067092|gb|ABU43156.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|195957246|gb|ACG59401.1| dihydrofolate reductase/thymidylate synthase [Plasmodium
           falciparum]
          Length = 608

 Score =  321 bits (822), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607


>gi|160262|gb|AAA29585.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|623444|gb|AAB59212.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
          Length = 608

 Score =  321 bits (822), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607


>gi|301598514|pdb|3JSU|A Chain A, Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate
           Synthase(Pfdhfr-Ts) Complexed With Qn254, Nadph, And
           Dump
 gi|301598515|pdb|3JSU|B Chain B, Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate
           Synthase(Pfdhfr-Ts) Complexed With Qn254, Nadph, And
           Dump
          Length = 608

 Score =  321 bits (822), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607


>gi|160264|gb|AAA29586.1| dihydrofolate reductase-thymidylate synthase (EC 1.5.1.3) (EC
           2.1.1.45) [Plasmodium falciparum]
          Length = 608

 Score =  321 bits (822), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607


>gi|156067082|gb|ABU43151.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|156067084|gb|ABU43152.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
          Length = 608

 Score =  321 bits (822), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607


>gi|118938|sp|P13922|DRTS_PLAFK RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|160260|gb|AAA29580.1| dihydrofolate reductase-thymidylate synthetase [Plasmodium
           falciparum]
 gi|195957244|gb|ACG59400.1| dihydrofolate reductase/thymidylate synthase [Plasmodium
           falciparum]
          Length = 608

 Score =  320 bits (821), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 326 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 385

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 386 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 445

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 446 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 505

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 506 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 565

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 566 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607


>gi|289466113|gb|ADC94827.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           billcollinsi]
          Length = 607

 Score =  320 bits (821), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 126/282 (44%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 325 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 384

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    +D             +LGPIYG QWR +        
Sbjct: 385 FIRGETNGNTLLNKNVRIWEANGTRDFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMH 444

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +IV  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 445 DNYENKGVDQLKNIVDLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 504

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 505 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 564

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 565 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 606


>gi|198423472|ref|XP_002121808.1| PREDICTED: similar to Thymidylate synthase (TSase) (TS), partial
           [Ciona intestinalis]
          Length = 261

 Score =  320 bits (821), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 120/260 (46%), Positives = 155/260 (59%), Gaps = 20/260 (7%)

Query: 24  VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83
            GT+S FG QMRFDL   FPLLTTK+V W+ V  ELLWF+RG +N   L    V IWD  
Sbjct: 1   TGTKSIFGCQMRFDLRTSFPLLTTKRVFWRGVAEELLWFIRGSTNAKELADKNVHIWDAN 60

Query: 84  AD------------KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADP 123
                         ++ +LGP+YG QWR +         DY    +DQ+  ++ ++R +P
Sbjct: 61  GSRKFLDNIGLTEREEFDLGPVYGFQWRHYGAEYKDMHSDYTNQGVDQLKKVIDTIRTNP 120

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSL 183
             RR I+ AWN   + KMALPPCH   QFYV NG+LSCQLYQRS D+ LG+PFNIASYSL
Sbjct: 121 NDRRIIMCAWNPVDLPKMALPPCHAFAQFYVCNGELSCQLYQRSADMGLGVPFNIASYSL 180

Query: 184 LTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
           LT M+A V G + G+F+HTLGD H+Y NH E    QL R PR  P +    ++  +    
Sbjct: 181 LTCMIAHVTGLKPGDFVHTLGDAHVYLNHIEPLKEQLKREPRPFPTLKFKRDVNSIDEIT 240

Query: 244 YEDFTLRSYEPHAAILAKVS 263
            ED  L  Y+PH  I  +++
Sbjct: 241 MEDLVLEGYKPHKKIQMEMA 260


>gi|119486915|ref|XP_001262377.1| thymidylate synthase [Neosartorya fischeri NRRL 181]
 gi|119410534|gb|EAW20480.1| thymidylate synthase [Neosartorya fischeri NRRL 181]
          Length = 344

 Score =  320 bits (821), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 128/305 (41%), Positives = 175/305 (57%), Gaps = 42/305 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 40  HQYLNLIRTILSEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATPSSDPIPVLPLLTTKR 99

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG Q
Sbjct: 100 VFLRAVIAELLWFISGCTSSIPLSEAGIKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 159

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ +V+ L+  P+ RR I+SAWN A + KMALPPCH  
Sbjct: 160 WRHFGAEYIDAKTDYTGQGVDQLAEVVRKLKETPFDRRIIMSAWNPADLKKMALPPCHMF 219

Query: 150 FQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
            QFYV       + G LSC LYQRS D+ LG+PFNIASY+LLT +LA V     G  IHT
Sbjct: 220 AQFYVSYPNGLDNKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHVTDLNPGTLIHT 279

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAIL 259
           +GD H+Y +H +  + QL R P   P++ I  +      +  ++ E+F +  Y+PH AI 
Sbjct: 280 MGDAHVYLDHVDALNEQLKREPTEFPELRIKRDDRGSGVVDGWKEEEFEVVGYQPHKAIK 339

Query: 260 AKVSV 264
             +SV
Sbjct: 340 MNMSV 344


>gi|237733928|ref|ZP_04564409.1| thymidylate synthase [Mollicutes bacterium D7]
 gi|229383009|gb|EEO33100.1| thymidylate synthase [Coprobacillus sp. D7]
          Length = 286

 Score =  320 bits (821), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 130/289 (44%), Positives = 182/289 (62%), Gaps = 34/289 (11%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           + ++V++ G +R DRTG GTRS FGYQ R+DL  GFPL+TTKK+  + +  ELLWF++GD
Sbjct: 1   MCKYVLENGENREDRTGTGTRSVFGYQTRYDLRDGFPLMTTKKMFLRPIAEELLWFIKGD 60

Query: 67  SNVSYLHRHGVSIWDEWA-----------------------------DKDGELGPIYGVQ 97
           +N+ YL    V IW+EW                               K G+LGP+YG Q
Sbjct: 61  TNIKYLVDRNVKIWNEWPYEDFKKSPDFNGETIEEFVEKIKTDDEFAKKHGDLGPVYGAQ 120

Query: 98  WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
           WR +   +   +DQ++ +V SL  +P+SRRHI+ AWN A +D MALPPCH   QFYV   
Sbjct: 121 WRDF---NYEGVDQLAKLVDSLTNNPFSRRHIICAWNPAQVDNMALPPCHAFLQFYVSAD 177

Query: 158 K--LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
           K  LSCQLYQRS D+FLG+PFNIASY+L+T MLA   G++  EFIHT+GD H+Y +HFE 
Sbjct: 178 KKYLSCQLYQRSADIFLGVPFNIASYALMTEMLARTCGYEAKEFIHTIGDAHIYKDHFEV 237

Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              Q++R P    ++++NP++  +  ++ ED  +  Y+ H  ++ KVSV
Sbjct: 238 VKQQIAREPLPKCKLVLNPDVKSIFDYKIEDIKIEDYQSHGKLVGKVSV 286


>gi|85373857|ref|YP_457919.1| thymidylate synthase [Erythrobacter litoralis HTCC2594]
 gi|84786940|gb|ABC63122.1| thymidylate synthase [Erythrobacter litoralis HTCC2594]
          Length = 327

 Score =  320 bits (821), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 134/305 (43%), Positives = 177/305 (58%), Gaps = 43/305 (14%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL+R +   GS+R DRTGVGTRS FG Q+RFDL+ G  PLLTTK+V+WK+   E+LW
Sbjct: 23  QYLDLMRRIWAEGSERVDRTGVGTRSVFGAQLRFDLADGAMPLLTTKRVYWKTATREMLW 82

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93
           FL GD+N+  L   GV IW+EW                             ++ G+LGP+
Sbjct: 83  FLTGDTNIRPLVLQGVKIWNEWPHARYVNETGEDIALDDFIQRIADDEAFAERWGDLGPV 142

Query: 94  YGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144
           YG QW  WP Y             I+QI+ +V+SL+ +P SRRHI+  WNVA +D+MALP
Sbjct: 143 YGKQWVDWPTYRYRKDGLYEKSEGINQIAEVVESLKTNPGSRRHIIEGWNVAELDRMALP 202

Query: 145 PCHCLFQFYVDNG-----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
           PCH  +QF+V        +L+C LYQRS DV LG+PFN+ S +LL  M+A     + GE 
Sbjct: 203 PCHKTYQFHVAKDDQGRDRLNCLLYQRSCDVALGLPFNLWSAALLQRMMAQQTDLEPGEL 262

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           +   GD HLY NH      QL+R P+  P + I      +  +R EDF + +YEPH  I 
Sbjct: 263 VWMGGDTHLYLNHEHLITEQLNREPQGHPTLEIVRRPDSIFDYRIEDFVVHNYEPHPPIK 322

Query: 260 AKVSV 264
           A V+V
Sbjct: 323 APVAV 327


>gi|225619118|ref|YP_002720344.1| thymidylate synthase [Brachyspira hyodysenteriae WA1]
 gi|254790229|sp|C0QWM9|TYSY_BRAHW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|225213937|gb|ACN82671.1| thymidylate synthase [Brachyspira hyodysenteriae WA1]
          Length = 266

 Score =  320 bits (820), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 138/266 (51%), Positives = 179/266 (67%), Gaps = 2/266 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
           M  YLDLL+ V++ G + +DRTGVGTR  FG Q+RF       P++TTK+V  K V+ EL
Sbjct: 1   MQNYLDLLKKVLEEGEETKDRTGVGTRRIFGPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           LWFL+G +N+ +L  + V IWDEWAD  GELGP+YG QWR+W   +GN IDQIS+IV +L
Sbjct: 61  LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNIVNTL 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNI 178
           R +P SRR I++AWNV  ID+M LPPCH + QF V+  G +   LYQRS D+FLG+PFNI
Sbjct: 121 RNNPASRRIILNAWNVGEIDQMHLPPCHMMCQFSVNSKGGIITHLYQRSADLFLGVPFNI 180

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           +SY++LT +LA   G    E I T GD H+YNNH EQ  LQLSR P      +   N  +
Sbjct: 181 SSYAILTRLLAMHSGLHASELIMTFGDAHIYNNHIEQVKLQLSREPLEQTTELFIDNRPN 240

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           + S  YEDF L  Y+ +  I A+V+V
Sbjct: 241 IFSHVYEDFKLEGYKYYPTIKAEVAV 266


>gi|82540717|ref|XP_724655.1| thymidylate synthase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479372|gb|EAA16220.1| thymidylate synthase, putative [Plasmodium yoelii yoelii]
          Length = 588

 Score =  320 bits (820), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 126/282 (44%), Positives = 180/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 306 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLNQYFPLLTTKKLFVRGIIEELLW 365

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 366 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 425

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y    +DQ+ +I+  ++ DP  RR I+ AWNV  +DKMALPPCH L QFYV +GKLSC
Sbjct: 426 DNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDKMALPPCHILCQFYVFDGKLSC 485

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH E   +QL+
Sbjct: 486 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAEFIHVLGNAHVYNNHIESLKIQLN 545

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R+P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 546 RTPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKISMDMA 587


>gi|12045082|ref|NP_072893.1| thymidylate synthase [Mycoplasma genitalium G37]
 gi|1351340|sp|P47469|TYSY_MYCGE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|3844830|gb|AAC71448.1| thymidylate synthase [Mycoplasma genitalium G37]
 gi|166078915|gb|ABY79533.1| thymidylate synthase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 287

 Score =  320 bits (820), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 135/293 (46%), Positives = 189/293 (64%), Gaps = 35/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL  +V+  G  R++RT   T S FGYQM+FDL+  FPLLTTKKV+WK++VHELL
Sbjct: 1   MKQYLDLASYVLANGKKRKNRTDTDTLSVFGYQMKFDLTNSFPLLTTKKVNWKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91
           WF++GD+N+ YL  +GV+IW+EW  ++                              +LG
Sbjct: 61  WFIKGDTNIKYLVDNGVNIWNEWPYENFKKSPSFQNETLQEFILKVKTDNEFAKQFADLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++     N +DQ+  ++Q ++ +P SRR IVS+WN + ++KMAL PCH LFQ
Sbjct: 121 PVYGKQWRNF-----NGVDQLKKVIQEIKENPNSRRLIVSSWNPSELEKMALAPCHSLFQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV+  KLS QLYQRSGD+FLG+PFNIASY+LL  ++A     + G FIHTLGD H+Y N
Sbjct: 176 FYVEEDKLSLQLYQRSGDIFLGVPFNIASYALLVYLVAHETKLKPGYFIHTLGDAHIYEN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ  LQL+R+    PQ+++  +   + ++ ++D  L  Y  H  I  +V+V
Sbjct: 236 HIEQIKLQLTRTTLDPPQVVLKSD-KSIFAYSFDDIELVGYNYHPFIYGRVAV 287


>gi|39944952|ref|XP_362013.1| hypothetical protein MGG_04458 [Magnaporthe oryzae 70-15]
 gi|145021519|gb|EDK05648.1| hypothetical protein MGG_04458 [Magnaporthe oryzae 70-15]
          Length = 339

 Score =  320 bits (820), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 126/321 (39%), Positives = 172/321 (53%), Gaps = 58/321 (18%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R ++  G  R DRTG GT S F    ++F L+K      PLLTTK+V  ++V+
Sbjct: 19  YQYLDLVREILDNGEHRPDRTGTGTYSIFAPRPLKFSLNKDGTPILPLLTTKRVFSRAVI 78

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102
            ELLWF+ G ++   L   GV IWD    ++            G+LGP+YG QWR +   
Sbjct: 79  LELLWFVSGATSAKPLSDAGVKIWDGNGSREFLDGLGLQHREVGDLGPVYGFQWRHFGAE 138

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQ++ +V  LR +PY RR ++SAWN   +  M LPPCH   QFYV  
Sbjct: 139 YTDCHADYTGQGVDQLAEVVHKLRTNPYDRRMVLSAWNPKDLKLMVLPPCHMFAQFYVSY 198

Query: 156 --------------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
                                      G L CQLYQRS D+ LG+PFNIASY+LLT M+A
Sbjct: 199 PKAGSDSNGNGNTTEGADQTSSPSKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIA 258

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN-PNIVD-----LLSFR 243
              G   G   H +GD H+Y +H +    QL R PR  P++ IN P + +     +  ++
Sbjct: 259 RATGLVPGSLTHVMGDAHVYADHVDALRTQLEREPRPFPELEINRPEVPEGGDGVIDGWK 318

Query: 244 YEDFTLRSYEPHAAILAKVSV 264
            EDF ++ Y+PH AI  K+SV
Sbjct: 319 LEDFVIKGYDPHKAIAMKMSV 339


>gi|296111709|ref|YP_003622091.1| thymidylate synthase [Leuconostoc kimchii IMSNU 11154]
 gi|295833241|gb|ADG41122.1| thymidylate synthase [Leuconostoc kimchii IMSNU 11154]
          Length = 322

 Score =  320 bits (820), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 138/317 (43%), Positives = 180/317 (56%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + V+  G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV++  +  ELLW
Sbjct: 6   QQYLDLAQKVLNEGALKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVYFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD---------------------------------- 87
           FLRGD+N+ +L +H   IWDEWA K+                                  
Sbjct: 66  FLRGDNNIRFLLQHNNHIWDEWAFKNWVESDQYTGPDMTNFGHRAIEDPEFAATYKIQKD 125

Query: 88  ----------------GELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127
                           G +G +YG  WR+W       D   IDQ+S +V  ++  P SRR
Sbjct: 126 IFVDKILNDDDFMATFGYVGDVYGKLWRNWETTSLNADEGTIDQVSRLVHDIKTTPDSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNAETTPQAPLPSCHVLSQFYVADGKLSVQLYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ G+F+HT+GD H+YNNH +Q   QLSR    LP++ +NP +  L  +  +D 
Sbjct: 246 VAAQTGYEVGDFVHTIGDTHIYNNHVDQITEQLSRPMHQLPKIWLNPEVKSLFDYTMDDI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  YE   AI A V+V
Sbjct: 306 KILDYESEPAIKAPVAV 322


>gi|302926083|ref|XP_003054223.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735164|gb|EEU48510.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 326

 Score =  320 bits (820), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 125/302 (41%), Positives = 172/302 (56%), Gaps = 39/302 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56
           HQYLDL++ +++ G  R DRTG GT S F    ++F L+       PLLTTK+V  ++V+
Sbjct: 25  HQYLDLVKEILETGERRPDRTGTGTYSIFAPRPLKFALNNNGTPILPLLTTKRVFTRAVI 84

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102
            ELLWF+ G+++ + L   G+ IWD    ++            G+LGP+YG QWR +   
Sbjct: 85  AELLWFVEGNTSSTSLSEAGIKIWDGNGSREFLDNLGLNHREVGDLGPVYGFQWRHFGAE 144

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQ++ I+  LR +PY RR I+SAWN A + KM LPPCH   QFYV  
Sbjct: 145 YVDAKTDYTGQGVDQLAEIIHKLRTNPYDRRLILSAWNPADLKKMVLPPCHMFAQFYVSY 204

Query: 156 ------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
                        G L CQLYQRS D+ LG+PFNIASY+LLT M+A V     G   H +
Sbjct: 205 PRRKDGDPETKPQGHLHCQLYQRSCDMGLGVPFNIASYALLTHMMAHVCELVPGSLTHVM 264

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKV 262
           GD H+Y +H E  + QL R PR  P++ I       +  ++ EDF ++ Y+PH  I  K+
Sbjct: 265 GDAHVYLDHVEALNTQLEREPRDFPELEITREKGGSIDGWKAEDFVIKGYDPHKTIAMKM 324

Query: 263 SV 264
           SV
Sbjct: 325 SV 326


>gi|121714363|ref|XP_001274792.1| thymidylate synthase [Aspergillus clavatus NRRL 1]
 gi|119402946|gb|EAW13366.1| thymidylate synthase [Aspergillus clavatus NRRL 1]
          Length = 332

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 128/305 (41%), Positives = 173/305 (56%), Gaps = 42/305 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG-----------FPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 28  HQYLNLIRTILAEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATSTADRIPVLPLLTTKR 87

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+YG Q
Sbjct: 88  VFLRAVLAELLWFISGCTSSLPLSEAGVKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 147

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ +V+ L+  P+ RR I+SAWN A + KMALPPCH  
Sbjct: 148 WRHFGAEYVDAKTDYAGQGVDQLAEVVRKLKDTPFDRRIIMSAWNPADLKKMALPPCHMF 207

Query: 150 FQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
            QFYV         G LSC LYQRS D+ LG+PFNIASY+LLT +LA       G  IHT
Sbjct: 208 AQFYVSYPDGLDRKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHATDLNPGTLIHT 267

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAIL 259
           +GD H+Y +H +  + QL R P   P++ I  +      +  ++ E+F +  Y+PH AI 
Sbjct: 268 MGDAHVYLDHVDALEEQLKREPTEFPELRIKRDDRGSGVVDGWKEEEFEVIGYQPHKAIK 327

Query: 260 AKVSV 264
             +SV
Sbjct: 328 MNMSV 332


>gi|212531339|ref|XP_002145826.1| thymidylate synthase [Penicillium marneffei ATCC 18224]
 gi|210071190|gb|EEA25279.1| thymidylate synthase [Penicillium marneffei ATCC 18224]
          Length = 311

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 122/304 (40%), Positives = 167/304 (54%), Gaps = 41/304 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-----QMRFDLSKGFPLLTTKKVHWKSVV 56
           +QYLDL+R ++  G  R DRTG GT S F       Q+  +     PLLTTK+V  ++V+
Sbjct: 8   NQYLDLIREILDHGERRPDRTGTGTLSIFAPRPFKFQLNDNGRPILPLLTTKRVFLRAVI 67

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102
            ELLWF+ G+++   L+  GV IWD    ++            G+LGP+YG QWR +   
Sbjct: 68  AELLWFIEGNTSSIALNEVGVKIWDGNGSREFLDNLGLTHREVGDLGPVYGFQWRHFGAE 127

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQI+ I+  LR +PY RR I++AWN   +  M LPPCH   QFYV  
Sbjct: 128 YKDAKADYTGEGVDQIADIIHKLRNNPYDRRMILTAWNPKDLKLMVLPPCHMFAQFYVSF 187

Query: 156 --------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
                          G L CQLYQRS D+ LG+PFNIASY+LLT MLA V     G   H
Sbjct: 188 PGQGLAETTSENKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGSLTH 247

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILA 260
            +GD H+Y +H +   +QL R PR  P++ I       +  ++ E+F ++ Y+PH AI  
Sbjct: 248 VMGDAHVYLDHVDALKVQLEREPRPFPELEITREKGASIDGWKAEEFVVKGYDPHKAIAM 307

Query: 261 KVSV 264
            +SV
Sbjct: 308 NMSV 311


>gi|15809582|gb|AAK55761.1| dihydrofolate reductase/thymidylate synthase [Plasmodium
           gallinaceum]
          Length = 589

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  VI  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 307 YQYLNIIYDVIMNGNKQGDRTGVGVVSKFGYMMKFNLNQYFPLLTTKKLFIRGIIEELLW 366

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 367 FIRGETNGNTLLNKNVRIWEANGTREFLDKRKLFDREVNDLGPIYGFQWRHFGAEYTNMH 426

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFYV + KLSC
Sbjct: 427 DNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYVFDNKLSC 486

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +    QL+
Sbjct: 487 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQPAQFIHILGNAHVYNNHIDSLKKQLN 546

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F+  DFT+ +Y  H  I   ++
Sbjct: 547 RIPYPFPTLKLNPDIKNIEDFKVSDFTIENYVHHDKISMDMA 588


>gi|169854361|ref|XP_001833855.1| thymidylate synthase [Coprinopsis cinerea okayama7#130]
 gi|116504990|gb|EAU87885.1| thymidylate synthase [Coprinopsis cinerea okayama7#130]
          Length = 319

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 125/295 (42%), Positives = 166/295 (56%), Gaps = 32/295 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59
           +QYL L+R V+  G  R DRTG GT + F     RF L     PLLTTK+   + ++ EL
Sbjct: 25  YQYLSLIRRVLDTGDIRPDRTGTGTIALFAPPSFRFSLLDATLPLLTTKRTFLRGIIEEL 84

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   G+ IWD    K+            G+LGP+YG QWR +      
Sbjct: 85  LWFVHGCTDSKLLSEKGIKIWDGNGSKEFLESRGLGHRREGDLGPVYGFQWRHFGAEYVD 144

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154
              DY G  +DQ+   ++ ++ +P  RR I+SAWN   I +MALPPCH + QFYV     
Sbjct: 145 CDADYTGQGVDQLRECIKKIKENPTDRRIILSAWNPKDIPQMALPPCHMMCQFYVQLPPQ 204

Query: 155 ----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  +LSC +YQRS D+ LGIPFNIASY+LLT M+A V G +  E I  LGD H+Y 
Sbjct: 205 SDPTRKPRLSCLMYQRSADLGLGIPFNIASYALLTHMIAHVTGTEAHELIIQLGDAHVYR 264

Query: 211 NHFEQADLQLSRSPRTLPQMIINPN-IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H E  + QL R PR  P++      IVD+  F+YEDF +  Y PH  I  K+SV
Sbjct: 265 DHVEALEEQLKREPRPFPKIRWAREGIVDIEDFKYEDFVVEGYNPHGPIAMKMSV 319


>gi|296222342|ref|XP_002757145.1| PREDICTED: thymidylate synthase-like isoform 2 [Callithrix jacchus]
          Length = 279

 Score =  319 bits (817), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 120/274 (43%), Positives = 159/274 (58%), Gaps = 38/274 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +   +   +D
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGDLGPVYGFQWRHFGA-EYRDMD 150

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
                                    + +  MALPPCH L QFYV NG+LSCQLYQRSGD+
Sbjct: 151 -------------------------SDLPLMALPPCHALCQFYVVNGELSCQLYQRSGDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG+PFNIASY+LLT M+A + G + G+F+HTLGD H+Y NH E   +QL R PR  P++
Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 246 KILRKVEKIDDFKAEDFKVEGYNPHPTIKMEMAV 279


>gi|26554141|ref|NP_758075.1| thymidylate synthase [Mycoplasma penetrans HF-2]
 gi|38258786|sp|Q8EV81|TYSY_MYCPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|26454149|dbj|BAC44479.1| thymidylate synthase [Mycoplasma penetrans HF-2]
          Length = 289

 Score =  319 bits (817), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 135/294 (45%), Positives = 188/294 (63%), Gaps = 35/294 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +Y DLL+ V+  G  + +RT     + FG Q R+DL+KGFPLLTTKK+ +K++ HELL
Sbjct: 1   MKEYKDLLKLVLDNGIMQENRTDTDAIAYFGTQSRYDLTKGFPLLTTKKMAYKAIFHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91
           WFL+G++N+ YL  + V IW+EW  ++                             GELG
Sbjct: 61  WFLKGETNIKYLVDNNVKIWNEWPYENYKKSPYFKNESIDEFILKIKEDDSFAKQFGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++     N +DQI+++++ ++ + YSRR IVS WN + I  M LPPCHCLFQ
Sbjct: 121 PVYGRQWRNF-----NGVDQITNLIEEIKKNKYSRRLIVSVWNPSEIKNMLLPPCHCLFQ 175

Query: 152 FYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           F+V+   +LSCQLYQRS D+FLG+PFNIASYSLLT M+A V      EF+HT+G  H+YN
Sbjct: 176 FFVNSKNELSCQLYQRSADLFLGVPFNIASYSLLTYMIAQVTNTTAKEFVHTIGVAHIYN 235

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NH +Q   QL+R P  LP +++N NI ++  F+ ED  ++ Y  H AI  KV+V
Sbjct: 236 NHIDQVKEQLTREPLQLPTLVLNKNIKNIFDFKIEDIEIKDYNSHPAIKGKVAV 289


>gi|70982167|ref|XP_746612.1| thymidylate synthase [Aspergillus fumigatus Af293]
 gi|66844235|gb|EAL84574.1| thymidylate synthase [Aspergillus fumigatus Af293]
 gi|159122153|gb|EDP47275.1| thymidylate synthase [Aspergillus fumigatus A1163]
          Length = 344

 Score =  319 bits (817), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 128/305 (41%), Positives = 174/305 (57%), Gaps = 42/305 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 40  HQYLNLIRTILAEGEHRPDRTGTGTRSIFAPPQLRFSLSKPGATPSSDPIPILPLLTTKR 99

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG Q
Sbjct: 100 VFLRAVIAELLWFISGCTSSIPLSEAGIKIWDGNGSREFLDKVGLGHREVGDLGPVYGFQ 159

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQ++ +V+ L+  P+ RR I+SAWN A + KMALPPCH  
Sbjct: 160 WRHFGAEYIDAKTDYTGQGVDQLAEVVRKLKETPFDRRIIMSAWNPADLKKMALPPCHMF 219

Query: 150 FQFYV-------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
            QFYV       + G LSC LYQRS D+ LG+PFNIASY+LLT +LA       G  IHT
Sbjct: 220 AQFYVSYPNGLDNKGSLSCLLYQRSCDMGLGVPFNIASYALLTHILAHATDLNPGTLIHT 279

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAIL 259
           +GD H+Y +H +  + QL R P   P++ I  N      +  ++ E+F +  Y+PH AI 
Sbjct: 280 MGDAHVYLDHVDALNEQLKREPTEFPELRIKRNDRGSGVVDGWKEEEFEVVGYQPHKAIK 339

Query: 260 AKVSV 264
             +SV
Sbjct: 340 MNMSV 344


>gi|32491069|ref|NP_871323.1| thymidylate synthase [Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis]
 gi|30173417|sp|Q8D2N4|TYSY_WIGBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|25166276|dbj|BAC24466.1| thyA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 264

 Score =  319 bits (817), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 142/264 (53%), Positives = 188/264 (71%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YLDLL  ++K G  + DRT  GT S FGYQ+R +L++GFPLLTTK  H+KS+V+ELL
Sbjct: 1   MKEYLDLLNLILKNGYPKIDRTKTGTLSMFGYQIRINLNEGFPLLTTKYCHFKSIVYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFLRGD+N+S+L ++ +SIW++WADK+G LGPIYG QWR+W D   N IDQI   +  L+
Sbjct: 61  WFLRGDTNISFLKKNNISIWNKWADKNGNLGPIYGKQWRAWEDKKNNTIDQIEIALNKLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P SRR +VS+WNV  +D M++PPCH LFQ YV N KLSCQ+YQRS D+FLG+PFNI S
Sbjct: 121 KEPSSRRILVSSWNVGELDLMSIPPCHVLFQLYVINNKLSCQVYQRSCDIFLGLPFNIGS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LLT + A+       + I T GD+HLY NH  QA LQL+RSP  LP++ I     +L 
Sbjct: 181 YALLTHIFANQCDLLVEDLIWTGGDIHLYKNHLNQAKLQLTRSPLPLPKIFIKKKPKNLF 240

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
           ++ + DF L  Y  H  I A +S+
Sbjct: 241 NYAFNDFLLIDYNHHPKIKAPISI 264


>gi|116490829|ref|YP_810373.1| thymidylate synthase [Oenococcus oeni PSU-1]
 gi|290890274|ref|ZP_06553353.1| hypothetical protein AWRIB429_0743 [Oenococcus oeni AWRIB429]
 gi|122276989|sp|Q04FR4|TYSY_OENOB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116091554|gb|ABJ56708.1| thymidylate synthase [Oenococcus oeni PSU-1]
 gi|290480060|gb|EFD88705.1| hypothetical protein AWRIB429_0743 [Oenococcus oeni AWRIB429]
          Length = 319

 Score =  318 bits (816), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 128/314 (40%), Positives = 175/314 (55%), Gaps = 51/314 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R +++ G+ + DRT  GT S FG QMRFDLS+GFPLLT+KKV +  +  ELLW
Sbjct: 6   EQYLNLARRILETGASKMDRTKTGTHSIFGAQMRFDLSEGFPLLTSKKVAFGRIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEW                                      
Sbjct: 66  FLRGDNNIRFLLQHHNHIWDEWPFKKWVESNEYKGPDMTDFGLRTQKDPIFAEQYKEQKK 125

Query: 85  -------------DKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSLRADPYSRRHIV 130
                         K G +G +YG  WR WPD  D   +DQI+ ++  ++ +P SRR I+
Sbjct: 126 IFVDRILNDDEFSKKFGTIGDVYGKLWRHWPDANDDGSVDQITRLINEIKVNPNSRRLIL 185

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           +AW+        LP CH + QFYV +GK+S Q+YQRS D FLG+PFNIASYSLL  M+A+
Sbjct: 186 TAWDPETTPFATLPSCHVMSQFYVVDGKISLQMYQRSADYFLGVPFNIASYSLLLSMVAA 245

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G + GEFIHT+GD H+YNNH +Q   QLS+    LP + +NP++  +  +   D  L 
Sbjct: 246 QTGLEVGEFIHTIGDAHIYNNHVDQIKEQLSKPTHKLPTLKLNPDVKSIFDYEMSDIKLE 305

Query: 251 SYEPHAAILAKVSV 264
           +Y     I A ++V
Sbjct: 306 NYIHEDVIKAPIAV 319


>gi|84501616|ref|ZP_00999788.1| Thymidylate synthase [Oceanicola batsensis HTCC2597]
 gi|84390237|gb|EAQ02796.1| Thymidylate synthase [Oceanicola batsensis HTCC2597]
          Length = 298

 Score =  318 bits (815), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 135/293 (46%), Positives = 180/293 (61%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLDLL  V++ G +R DRTGVGTRS FG  +RFDLS+   P+LTTK+V+WK+ V E+L
Sbjct: 6   YQYLDLLSQVLENGDERTDRTGVGTRSIFGAMVRFDLSEDTVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92
           WFL G +N+  L R  V IW                            D +A + GELGP
Sbjct: 66  WFLTGGTNIQPLLRENVRIWTDWPLATYRRETGEDIGQDVFEQRILEDDAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +V++LR +P SRR +   WNVA +  MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWLGSDGKEHDQIADLVRTLRENPASRRMLFHGWNVAELGGMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+C L+QRS D+ LG PFN    + L +MLA   G + GE +   GDVHLY N
Sbjct: 186 HVTTDGRLNCLLFQRSADLLLGAPFNYVGATSLQLMLAQQAGLRPGELVWVGGDVHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q+SR PR LP+M +      +  +R EDF +  Y PHAAI A+V+V
Sbjct: 246 HLDQAREQMSREPRPLPRMRLLRQAESIDGYRIEDFEVEGYAPHAAIRAEVAV 298


>gi|255538724|ref|XP_002510427.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Ricinus communis]
 gi|223551128|gb|EEF52614.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Ricinus communis]
          Length = 591

 Score =  318 bits (815), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 121/280 (43%), Positives = 159/280 (56%), Gaps = 20/280 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL L   +I  G+ + DRTG GT S FG QM+++L K FPLLTTK+V W  VV ELLW
Sbjct: 306 YMYLRLAEQIISNGTLKDDRTGTGTLSKFGGQMQYNLRKSFPLLTTKRVFWMGVVEELLW 365

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G +N   L   G+ IWD  A +D             +LGPIYG QWR +        
Sbjct: 366 FISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKDIEESDLGPIYGFQWRYFGARYTDMH 425

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G   DQ+  ++  +++ P  R  I+ +WN + +  MA PPCH   QFYV NG+LSC
Sbjct: 426 ADYSGQGFDQLVDVIDKIKSKPDDRCIILRSWNPSDLKLMAFPPCHMFAQFYVANGELSC 485

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           Q+YQRS D+ LG+PFNIA Y+LLT ++A V     G+FIH +GD  +   H      QL 
Sbjct: 486 QMYQRSADIGLGVPFNIAFYALLTCIIAHVCALVPGDFIHLIGDARVCTTHIGPLQKQLQ 545

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
           + P   P + INP   D+ SF   DF L  Y+PH  I  K
Sbjct: 546 KLPTPFPILRINPAKKDIDSFEASDFQLIGYDPHEYIDMK 585


>gi|289466109|gb|ADC94825.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           reichenowi]
          Length = 598

 Score =  318 bits (815), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 317 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 376

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 377 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 436

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 437 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 496

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 497 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 556

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 557 RIPYPFPTLKLNPDIKNIEDFTILDFTIQNYVHHEKISMDMA 598


>gi|126740659|ref|ZP_01756345.1| Thymidylate synthase [Roseobacter sp. SK209-2-6]
 gi|126718174|gb|EBA14890.1| Thymidylate synthase [Roseobacter sp. SK209-2-6]
          Length = 325

 Score =  318 bits (815), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 131/293 (44%), Positives = 182/293 (62%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
           +QYLDL+  V++ G  R DRTGVGTRS FG  +RFDLS G  P+LTTK+V+WK+ + E+L
Sbjct: 33  YQYLDLMEQVLEKGDKRVDRTGVGTRSLFGAMLRFDLSDGTAPILTTKRVYWKTAIKEML 92

Query: 61  WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92
           WFL G +N+  L R  V IW                            D +A + GELGP
Sbjct: 93  WFLTGGTNIQPLLRDNVRIWSDWPLATYRSETGEEISQEDFEQRILEDDAFATRWGELGP 152

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +++SLR  P SRR +   WNVA + +MALPPCH ++Q+
Sbjct: 153 VYGKQWRRWMGADGQEHDQITGLIKSLRETPASRRMLFHGWNVAELSEMALPPCHMVYQY 212

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+C L+QRS D+ LG+PFN    S L +MLA   G + GE +   GDVHLY N
Sbjct: 213 HVTSDGRLNCLLFQRSVDLLLGMPFNCVGASALQLMLAQQAGLRPGELVWVGGDVHLYLN 272

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q++R PR LPQ+ +  +  ++ S++  DF++  Y+PH  I A+V+V
Sbjct: 273 HLDQAREQMAREPRPLPQISLTRHPENIDSYKISDFSVEGYDPHPPIAAEVAV 325


>gi|258577885|ref|XP_002543124.1| thymidylate synthase [Uncinocarpus reesii 1704]
 gi|237903390|gb|EEP77791.1| thymidylate synthase [Uncinocarpus reesii 1704]
          Length = 347

 Score =  318 bits (815), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 129/311 (41%), Positives = 169/311 (54%), Gaps = 48/311 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 37  HQYLNLIRSILTTGEHRPDRTGTGTRSLFAPPQLRFSLSKPGPASSSAPIPILPLLTTKR 96

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+YG Q
Sbjct: 97  VFLRAVILELLWFVSGSTSSIPLSEAGVKIWDGNGSREFLDSVGLSHRDVGDLGPVYGFQ 156

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQI  +V+ L+ +PY RR I+SAWN A + KMALPPCH  
Sbjct: 157 WRHFGAEYVDAKADYTGKGVDQIVEVVRKLKENPYDRRIILSAWNPADLKKMALPPCHMF 216

Query: 150 FQFYVD-------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196
            QFYV               G L C LYQRS D+ LG+PFNIASY++LT MLA       
Sbjct: 217 AQFYVSFAPDANGETGKRQKGTLHCLLYQRSCDMGLGVPFNIASYAILTHMLAHAADLYP 276

Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSYE 253
           G   HT+GD H+Y +H E    QL+R P   P++ I        ++  +   DF +  Y+
Sbjct: 277 GTLTHTMGDAHVYLDHVEALQEQLTREPTAFPELKIKREDRGSGEMDGWEESDFEVIGYK 336

Query: 254 PHAAILAKVSV 264
           PH  I  K+SV
Sbjct: 337 PHKMIKMKMSV 347


>gi|118587059|ref|ZP_01544489.1| thymidylate synthase [Oenococcus oeni ATCC BAA-1163]
 gi|118432469|gb|EAV39205.1| thymidylate synthase [Oenococcus oeni ATCC BAA-1163]
          Length = 331

 Score =  318 bits (815), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 128/314 (40%), Positives = 175/314 (55%), Gaps = 51/314 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L R +++ G+ + DRT  GT S FG QMRFDLS+GFPLLT+KKV +  +  ELLW
Sbjct: 18  EQYLNLARRILETGASKMDRTKTGTHSIFGAQMRFDLSEGFPLLTSKKVAFGRIKSELLW 77

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA------------------------------------- 84
           FLRGD+N+ +L +H   IWDEW                                      
Sbjct: 78  FLRGDNNIRFLLQHHNHIWDEWPFKKWVESNEYKGPDMTDFGLRTQKDPIFAEQYKEQKK 137

Query: 85  -------------DKDGELGPIYGVQWRSWPD-YDGNVIDQISSIVQSLRADPYSRRHIV 130
                         K G +G +YG  WR WPD  D   +DQI+ ++  ++ +P SRR I+
Sbjct: 138 IFVDRILNDDEFSKKFGTIGDVYGKLWRHWPDANDDGSVDQITRLINEIKVNPNSRRLIL 197

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           +AW+        LP CH + QFYV +GK+S Q+YQRS D FLG+PFNIASYSLL  M+A+
Sbjct: 198 TAWDPETTPFATLPSCHVMSQFYVVDGKISLQMYQRSADYFLGVPFNIASYSLLLSMVAA 257

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G + GEFIHT+GD H+YNNH +Q   QLS+    LP + +NP++  +  +   D  L 
Sbjct: 258 QTGLEVGEFIHTIGDAHIYNNHVDQIKEQLSKPTHKLPTLKLNPDVKSIFDYEMSDIKLE 317

Query: 251 SYEPHAAILAKVSV 264
           +Y     I A ++V
Sbjct: 318 NYIHEDVIKAPIAV 331


>gi|269860859|ref|XP_002650147.1| thymidylate synthase [Enterocytozoon bieneusi H348]
 gi|220066420|gb|EED43902.1| thymidylate synthase [Enterocytozoon bieneusi H348]
          Length = 291

 Score =  317 bits (814), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 130/284 (45%), Positives = 177/284 (62%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYL+L++ +++ G    DRTG GTRS FG Q+RF L    FPLLTTK+V  KS++ ELL
Sbjct: 8   HQYLELIKRILRDGIQCNDRTGTGTRSVFGAQLRFSLRNNQFPLLTTKRVAIKSIIGELL 67

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------ADKDGELGPIYGVQWRSWP------- 102
           +F+RG +N   L + G+ IWD               ++ +LGP+YG QWR +        
Sbjct: 68  FFIRGQTNNKILKQQGIHIWDGNSTREFFDKVGIQREEDDLGPVYGFQWRHFGAHYKTCH 127

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ+  ++  ++ +P SRR IVSAWN   +  MALPPCH LFQF V   KLSC
Sbjct: 128 DDYTGEGVDQLKYVIDEIQKNPESRRIIVSAWNPLCLKDMALPPCHTLFQFRVYGNKLSC 187

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRSGDV LGIPFNIASY+LLT+++A +   +  EF+HT+GD H+YN+H E  + Q++
Sbjct: 188 MLYQRSGDVGLGIPFNIASYALLTIIVAQICNLEPDEFVHTIGDAHIYNDHIEALNKQIT 247

Query: 222 RSPRTLPQMII-NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R+P   P++ + N        F  EDF L  Y  H  I+ K+SV
Sbjct: 248 RTPFPFPKLKLANKEYRKFEDFEIEDFILEDYNHHPGIIMKMSV 291


>gi|302496437|ref|XP_003010220.1| hypothetical protein ARB_03572 [Arthroderma benhamiae CBS 112371]
 gi|302655144|ref|XP_003019366.1| hypothetical protein TRV_06595 [Trichophyton verrucosum HKI 0517]
 gi|291173761|gb|EFE29580.1| hypothetical protein ARB_03572 [Arthroderma benhamiae CBS 112371]
 gi|291183083|gb|EFE38721.1| hypothetical protein TRV_06595 [Trichophyton verrucosum HKI 0517]
          Length = 351

 Score =  317 bits (814), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 132/312 (42%), Positives = 172/312 (55%), Gaps = 49/312 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 40  HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG 
Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159

Query: 97  QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ +V+ L+  PY RR I+SAWN A + KMALPPCH 
Sbjct: 160 QWRHFGAEYIDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219

Query: 149 LFQFYVD-------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
             QFYV               G LSC LYQRS D+ LG+PFNIASY+LLT M A      
Sbjct: 220 FAQFYVSFPPQKTGDEGKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSY 252
            G FIHT+GD H+Y +H E    QL+R P   P + IN       ++  ++  DF +  Y
Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339

Query: 253 EPHAAILAKVSV 264
           +PH  I  K+SV
Sbjct: 340 KPHKLIKMKMSV 351


>gi|289466111|gb|ADC94826.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           reichenowi]
          Length = 598

 Score =  317 bits (814), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 123/282 (43%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 316 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 375

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 376 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 435

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV   D+MAL PCH L QFYV +GKLSC
Sbjct: 436 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDFDQMALLPCHILCQFYVFDGKLSC 495

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 496 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 555

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 556 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 597


>gi|330919260|ref|XP_003298539.1| hypothetical protein PTT_09291 [Pyrenophora teres f. teres 0-1]
 gi|311328202|gb|EFQ93363.1| hypothetical protein PTT_09291 [Pyrenophora teres f. teres 0-1]
          Length = 345

 Score =  317 bits (814), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 131/308 (42%), Positives = 174/308 (56%), Gaps = 45/308 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRST-FGYQMRFDLSK------------GFPLLTTK 48
           HQYL L+R++++ G  R DRTG GT +  F  QM+F LS+              PLLTTK
Sbjct: 38  HQYLALIRNILENGEHRPDRTGTGTYALPFPPQMKFALSRPSLDPARQDPDLILPLLTTK 97

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD                ++GELGP+YG 
Sbjct: 98  RVFLRAVIGELLWFVAGSTHSKALSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGF 157

Query: 97  QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ I+  L+  PY RR I+SAWN A I KMALPPCH 
Sbjct: 158 QWRHFGAEYKGHSHDYTGEGVDQLAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHM 217

Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             QFYV             G L   LYQRS D+ LG+PFNIASY+LLT MLA V     G
Sbjct: 218 FAQFYVSFPGHKQGEERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPG 277

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHA 256
            F HT+GD H+Y +H E   +Q+ R PR  P + IN  I   +  ++ E+F +  Y+PHA
Sbjct: 278 TFTHTMGDAHVYLDHVEALKVQVEREPRDFPTLKINREIGGSIDGWKAEEFEVIGYKPHA 337

Query: 257 AILAKVSV 264
           +I  K+SV
Sbjct: 338 SIAMKMSV 345


>gi|321258400|ref|XP_003193921.1| thymidylate synthase [Cryptococcus gattii WM276]
 gi|317460391|gb|ADV22134.1| thymidylate synthase [Cryptococcus gattii WM276]
          Length = 317

 Score =  317 bits (814), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 120/296 (40%), Positives = 165/296 (55%), Gaps = 34/296 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59
           +QYLDL++ +I  G  R DRTG GT + F     RF L+    PLLTTK+V  + V+ EL
Sbjct: 21  YQYLDLIKRIINTGEVRPDRTGTGTVTLFAPPSFRFSLANNTLPLLTTKRVFLRGVIAEL 80

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IWD   +K+            G+LGP+YG QWR +      
Sbjct: 81  LWFVSGCTDAKVLSSQGVGIWDGNGNKEFLEKVGLGHRREGDLGPVYGFQWRHFGAEYTD 140

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              +Y G  +DQ+  ++ +++ +P  RR I+SAWN   +  MALPPCH   QFYV     
Sbjct: 141 ADGNYKGKGVDQLQRVIDTIKNNPTDRRIILSAWNPKDLPLMALPPCHMFCQFYVSLPPA 200

Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  KLSC +YQRS D+ LG+PFNIASY+LLT M+A +   +  EFI  +GD H+Y 
Sbjct: 201 DSPNSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYR 260

Query: 211 NHFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           +H E    QL R PR  P++        I D+  F+ EDF +  Y+P   I  K+S
Sbjct: 261 DHVEPLKTQLEREPREFPKLKWARSKEEIGDIDGFKVEDFEVEGYKPWGKIDMKMS 316


>gi|316933227|ref|YP_004108209.1| thymidylate synthase [Rhodopseudomonas palustris DX-1]
 gi|315600941|gb|ADU43476.1| thymidylate synthase [Rhodopseudomonas palustris DX-1]
          Length = 300

 Score =  317 bits (813), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 132/293 (45%), Positives = 173/293 (59%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDLL  V+  G +R DRTGVGTR+ FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 8   HQYLDLLAQVLARGDERIDRTGVGTRALFGAMVRFDLSDGTVPILTTKRVYWKTAVKEML 67

Query: 61  WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92
           WFL G +N+  L +  V IW                            D +A + G+LGP
Sbjct: 68  WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDPISQDEFEKRIVADDAFAARWGDLGP 127

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +VQ+LR +P SRR +  AWN   +  MALPPCH ++Q+
Sbjct: 128 VYGKQWRRWLGADGREHDQIADLVQTLRNNPASRRMLFHAWNPPELGAMALPPCHMVYQY 187

Query: 153 YVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V   G+L C LYQRS D+ LG PFN    + L +MLA       GE I   GDVHLY N
Sbjct: 188 HVTQGGRLDCLLYQRSCDLLLGAPFNFVGATALQLMLAQQANLTPGELIWVGGDVHLYLN 247

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q++R+PR LP M +      +  ++  DF +  Y+PHAAI A V+V
Sbjct: 248 HLDQAREQIARAPRPLPAMRLMRRPDSIDGYKITDFEVEGYDPHAAIKADVAV 300


>gi|2833336|sp|Q27713|DRTS_PLABA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|555825|gb|AAB60237.1| dihydrofolate reductase thymidylate synthase [Plasmodium berghei]
          Length = 587

 Score =  317 bits (813), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 125/282 (44%), Positives = 180/282 (63%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+ + DRTGVG  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 305 YQYLNIIYDIIMHGNKQDDRTGVGVLSKFGYMMKFNLNEYFPLLTTKKLFIRGIIEELLW 364

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 365 FIRGETNGNTLLEKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTDMH 424

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y    +DQ+ +I+  ++ DP  RR I+ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 425 DNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKNLDQMALPPCHILCQFYVFDGKLSC 484

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH E   +QL+
Sbjct: 485 IMYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQAAEFIHVLGNAHVYNNHIESLKIQLN 544

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R+P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 545 RTPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKINMDMA 586


>gi|325095325|gb|EGC48635.1| thymidylate synthase [Ajellomyces capsulatus H88]
          Length = 369

 Score =  317 bits (813), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 134/323 (41%), Positives = 177/323 (54%), Gaps = 60/323 (18%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46
           HQYL L+R +++ G  R DRTG GTRS F   Q+RF LSK                PLLT
Sbjct: 47  HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+Y
Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166

Query: 95  GVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           G QWR +         DY G  +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC
Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQITEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226

Query: 147 HCLFQFYV----------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           H   QFYV                        G LSCQLYQRS D+ LG+PFNIASY+LL
Sbjct: 227 HMFAQFYVSFPAGDRDDGGEEGEEKNKTEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLS 241
           T MLA  +    G  IHT+GD H+Y +H E    QL+R P   P++II  +      +  
Sbjct: 287 THMLAHAVDLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMDG 346

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           ++ E+F +  Y+PH  I  K+SV
Sbjct: 347 WKEEEFEVVGYKPHKGIKMKMSV 369


>gi|115299508|gb|ABI93724.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
          Length = 369

 Score =  317 bits (813), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 128/267 (47%), Positives = 168/267 (62%), Gaps = 21/267 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLD++R ++K G  + DRTGVGT S FG  MRF+L++ FPLLTTKKV ++ VV ELLW
Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGVVEELLW 163

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           FLRGD+N   L   GV IW+    ++             +LGP+YG QWR +        
Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY+   +DQ+  ++Q L+ +P SRR I+SAWN + + +MALPPCH + QF+V NGKLSC
Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQMALPPCHVMSQFFVANGKLSC 283

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D  LGIPFNIASY+LLT MLA       GEF+H LGD H+Y+NH +    Q+ 
Sbjct: 284 MMYQRSCDFGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFT 248
           R P   P + I      L  + YEDF 
Sbjct: 344 RVPYPFPILKIKSK-KSLFDYTYEDFE 369


>gi|189210649|ref|XP_001941656.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187977749|gb|EDU44375.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 345

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 131/308 (42%), Positives = 174/308 (56%), Gaps = 45/308 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRST-FGYQMRFDLSK------------GFPLLTTK 48
           HQYL L+R++++ G  R DRTG GT +  F  QM+F LS+              PLLTTK
Sbjct: 38  HQYLSLIRNILENGEHRPDRTGTGTYALPFPPQMKFALSQPSSDPTRQDPDLILPLLTTK 97

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD                ++GELGP+YG 
Sbjct: 98  RVFLRAVIGELLWFVAGSTHSKALSDAGIKIWDGNGSREYLDSVGLSHYEEGELGPVYGF 157

Query: 97  QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ I+  L+  PY RR I+SAWN A I KMALPPCH 
Sbjct: 158 QWRHFGAEYKGHSHDYTGEGVDQLAEIIDKLKNKPYDRRIILSAWNPADIKKMALPPCHM 217

Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             QFYV             G L   LYQRS D+ LG+PFNIASY+LLT MLA V     G
Sbjct: 218 FAQFYVSFPGHKQGEERPRGVLHSLLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLTPG 277

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHA 256
            F HT+GD H+Y +H E   +Q+ R PR  P + IN  I   +  ++ E+F +  Y+PHA
Sbjct: 278 TFTHTMGDAHVYLDHVEALKVQVEREPRDFPTLKINREIGGSIDGWKAEEFEVIGYKPHA 337

Query: 257 AILAKVSV 264
           +I  K+SV
Sbjct: 338 SIAMKMSV 345


>gi|46108362|ref|XP_381239.1| hypothetical protein FG01063.1 [Gibberella zeae PH-1]
          Length = 325

 Score =  317 bits (812), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 123/302 (40%), Positives = 172/302 (56%), Gaps = 39/302 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R +++ G  R DRTG GT S F    ++F L+       PLLTTK+V  ++V+
Sbjct: 24  NQYLDLVREILETGERRPDRTGTGTFSIFAPRPLKFALNNNGTPILPLLTTKRVFTRAVI 83

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102
            ELLWF+ G+++   L   G+ IWD    ++            G+LGP+YG QWR +   
Sbjct: 84  AELLWFIEGNTSSKSLSEAGIKIWDGNGSREFLDNLGLQHREVGDLGPVYGFQWRHFGAE 143

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQ++ I+  LR +PY RR ++SAWN A + KM LPPCH   QFYV  
Sbjct: 144 YVDAKTDYTGQGVDQLAEIIHKLRTNPYDRRLVLSAWNPADMKKMVLPPCHMFAQFYVSY 203

Query: 156 ------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
                        G L CQLYQRS D+ LG+PFNIASY+LLT M+A V     G   H +
Sbjct: 204 PRSKDENSEEKPQGHLHCQLYQRSCDMGLGVPFNIASYALLTHMMAHVCELVPGSLTHVM 263

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKV 262
           GD H+Y +H +   +QL R PR  P++ I       +  ++ +DFT++ Y+PH  I  K+
Sbjct: 264 GDAHVYLDHVDALKVQLEREPRNFPELEIAREKGGSIDGWKADDFTVKGYDPHKTIAMKM 323

Query: 263 SV 264
           SV
Sbjct: 324 SV 325


>gi|166164575|gb|ABY83786.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  317 bits (812), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 124/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622


>gi|166164577|gb|ABY83787.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  317 bits (812), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 124/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622


>gi|166164573|gb|ABY83785.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 124/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622


>gi|166164565|gb|ABY83781.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  316 bits (810), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 124/275 (45%), Positives = 175/275 (63%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+    ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVGGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622


>gi|166164569|gb|ABY83783.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  316 bits (810), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 124/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVREIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622


>gi|315039927|ref|XP_003169341.1| thymidylate synthase [Arthroderma gypseum CBS 118893]
 gi|311346031|gb|EFR05234.1| thymidylate synthase [Arthroderma gypseum CBS 118893]
          Length = 345

 Score =  316 bits (810), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 132/310 (42%), Positives = 172/310 (55%), Gaps = 47/310 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 36  HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 95

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG 
Sbjct: 96  RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 155

Query: 97  QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ +V+ L+  PY RR I+SAWN A + KMALPPCH 
Sbjct: 156 QWRHFGAEYVDAKTDYAGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 215

Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             QFYV             G LSC LYQRS D+ LG+PFNIASY+LLT M A       G
Sbjct: 216 FAQFYVSFPPQKEGDERGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPG 275

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSYEP 254
            FIHT+GD H+Y +H E    QL+R P   P + IN       ++  ++  DF +  Y+P
Sbjct: 276 TFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDQGSGEMDGWKDSDFEVLDYKP 335

Query: 255 HAAILAKVSV 264
           H  I  K+SV
Sbjct: 336 HKLIKMKMSV 345


>gi|166164571|gb|ABY83784.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  316 bits (810), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 123/275 (44%), Positives = 175/275 (63%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+  WNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCTWNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622


>gi|327298179|ref|XP_003233783.1| thymidylate synthase [Trichophyton rubrum CBS 118892]
 gi|326463961|gb|EGD89414.1| thymidylate synthase [Trichophyton rubrum CBS 118892]
          Length = 351

 Score =  316 bits (810), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 132/312 (42%), Positives = 172/312 (55%), Gaps = 49/312 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 40  HQYLNLIRTIIGTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG 
Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEGGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159

Query: 97  QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ +V+ L+  PY RR I+SAWN A + KMALPPCH 
Sbjct: 160 QWRHFGAEYIDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219

Query: 149 LFQFYVD-------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
             QFYV               G LSC LYQRS D+ LG+PFNIASY+LLT M A      
Sbjct: 220 FAQFYVSFPLQKAGDEGKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSY 252
            G FIHT+GD H+Y +H E    QL+R P   P + IN       ++  ++  DF +  Y
Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339

Query: 253 EPHAAILAKVSV 264
           +PH  I  K+SV
Sbjct: 340 KPHKLIKMKMSV 351


>gi|166164563|gb|ABY83780.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 620

 Score =  316 bits (810), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 125/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 620


>gi|304373440|ref|YP_003856649.1| Thymidylate synthase 2 [Mycoplasma hyorhinis HUB-1]
 gi|304309631|gb|ADM22111.1| Thymidylate synthase 2 [Mycoplasma hyorhinis HUB-1]
          Length = 286

 Score =  316 bits (809), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 140/293 (47%), Positives = 187/293 (63%), Gaps = 36/293 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+ LRH+++ G  + +RT V + +TFGYQMRFDLS+GFPL+TTKK ++ S+ HELL
Sbjct: 1   MRQYLEFLRHILQKGIKKTNRTIVDSINTFGYQMRFDLSEGFPLVTTKKTNFASIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91
           WF++GD+N+ YL  + V+IW+EW  ++                             GELG
Sbjct: 61  WFIKGDTNIKYLVDNNVNIWNEWPYENYKKSKEFQGESLKEFIVKIKENPSFAKQFGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++       +DQ+  ++Q ++ +P SRR IVSAWN   ID M LPPCH LFQ
Sbjct: 121 PVYGKQWRNFL-----GVDQLKKVIQEIKTNPNSRRLIVSAWNPLEIDSMLLPPCHSLFQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV N KLSCQLYQRS D FLG+PFNIASYSLL  M+A     + GEFIHT+GD H+Y N
Sbjct: 176 FYVANNKLSCQLYQRSADAFLGVPFNIASYSLLVFMIAQECELEVGEFIHTIGDAHIYVN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +Q +LQL+R P  LP++ I          ++ED  L  YE  + I  +V+V
Sbjct: 236 HIDQVNLQLTRIPHKLPKLKITKKP--FFDIQFEDLQLIDYEHDSFIKGEVAV 286


>gi|30749344|pdb|1J3I|C Chain C, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase-
           Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210,
           Nadph, And Dump
 gi|30749345|pdb|1J3I|D Chain D, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase-
           Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210,
           Nadph, And Dump
 gi|30749348|pdb|1J3J|C Chain C, Double Mutant (C59r+s108n) Plasmodium Falciparum
           Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts)
           Complexed With Pyrimethamine, Nadph, And Dump
 gi|30749349|pdb|1J3J|D Chain D, Double Mutant (C59r+s108n) Plasmodium Falciparum
           Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts)
           Complexed With Pyrimethamine, Nadph, And Dump
 gi|30749352|pdb|1J3K|C Chain C, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate Synthase
           (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump
 gi|30749353|pdb|1J3K|D Chain D, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate Synthase
           (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump
 gi|222143068|pdb|3DG8|C Chain C, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate Synthase
           (Pfdhfr-Ts) Complexed With Rjf670, Nadph, And Dump
 gi|222143069|pdb|3DG8|D Chain D, Quadruple Mutant (N51i+c59r+s108n+i164l) Plasmodium
           Falciparum Dihydrofolate Reductase-Thymidylate Synthase
           (Pfdhfr-Ts) Complexed With Rjf670, Nadph, And Dump
 gi|222143072|pdb|3DGA|C Chain C, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase-
           Thymidylate Synthase (Pfdhfr-Ts) Complexed With
           Rjf01302, Nadph, And Dump
 gi|222143073|pdb|3DGA|D Chain D, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase-
           Thymidylate Synthase (Pfdhfr-Ts) Complexed With
           Rjf01302, Nadph, And Dump
          Length = 328

 Score =  315 bits (808), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 20/282 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  ++  G+ + DRTGVG  S FGY M+FDLS+ FPLLTTKK+  + ++ ELLW
Sbjct: 46  YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLW 105

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 106 FIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMY 165

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   +DQ+ +I+  ++ DP SRR ++ AWNV  +D+MALPPCH L QFYV +GKLSC
Sbjct: 166 DNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSC 225

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T M+A V   Q  +FIH LG+ H+YNNH +   +QL+
Sbjct: 226 IMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLN 285

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 286 RIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 327


>gi|242772690|ref|XP_002478088.1| thymidylate synthase [Talaromyces stipitatus ATCC 10500]
 gi|218721707|gb|EED21125.1| thymidylate synthase [Talaromyces stipitatus ATCC 10500]
          Length = 312

 Score =  315 bits (808), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 123/305 (40%), Positives = 167/305 (54%), Gaps = 42/305 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R +   G  R DRTG GT S F     +F L+       PLLTTK+V  ++V+
Sbjct: 8   NQYLDLIRDIFDHGEQRPDRTGTGTLSIFAPRPFKFKLNDNGRPILPLLTTKRVFLRAVI 67

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102
            ELLWF+ G+++   L+  GV IWD    ++            G+LGP+YG QWR +   
Sbjct: 68  AELLWFIEGNTSSIALNEVGVKIWDGNGSREFLDNLGLTHREVGDLGPVYGFQWRHFGAG 127

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY G  +DQI+ I+  LR +PY RR I++AWN   +  M LPPCH   QFYV  
Sbjct: 128 YIDAKADYTGQGVDQIADIIHKLRTNPYDRRMILTAWNPKDLRLMVLPPCHMFAQFYVSF 187

Query: 156 ---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
                           G L CQLYQRS D+ LG+PFNIASY+LLT MLA       G   
Sbjct: 188 PGQGLAKNGTTENKPKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHACDLVPGSLT 247

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMII-NPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           H +GD H+Y +H +   +QL R PR  P++ I +     +  ++ EDF ++ Y+PH AI 
Sbjct: 248 HVMGDAHVYLDHVDALKVQLEREPRPFPELEITHEKGGSIDGWKAEDFVVKGYDPHKAIA 307

Query: 260 AKVSV 264
             +SV
Sbjct: 308 MNMSV 312


>gi|4249575|dbj|BAA74947.1| thymidylate synthase [Oryza sativa]
          Length = 322

 Score =  315 bits (808), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 130/317 (41%), Positives = 173/317 (54%), Gaps = 54/317 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + ++  G+ + DRTG GT S FG QMRFDL +GFPLLTTKKV +  +  ELLW
Sbjct: 6   QQYLDLAQKILAEGNLKGDRTGTGTHSLFGTQMRFDLQEGFPLLTTKKVFFGLIKSELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           FLRGD+N+ +L +H   IWDEW                                      
Sbjct: 66  FLRGDNNIRFLLQHNNHIWDEWAFKNWVESNDYTGPDMTNFGHRAETDPEFAAVYQTQKA 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDY----DGNVIDQISSIVQSLRADPYSRR 127
                        +K G +G +YG  WR W           ++    +V+ ++  P SRR
Sbjct: 126 IFVDKILNDDAFMEKFGYVGDVYGKLWRGWETSSVTAGAETVESSCGLVEEIKTTPDSRR 185

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I++AWN     +  LP CH L QFYV +GKLS QLYQRSGD FLG+PFNIASYSLL  M
Sbjct: 186 LILTAWNADTTPQAPLPSCHVLSQFYVADGKLSLQLYQRSGDFFLGVPFNIASYSLLLHM 245

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDF 247
           +A+  G++ G+F+HT+GD H+YNNH  Q   QLSR    LP++ +NP++  +  +   D 
Sbjct: 246 MAAQTGYEVGDFVHTIGDTHIYNNHVAQITEQLSRPMHPLPKLWLNPDVKSIFDYTMADI 305

Query: 248 TLRSYEPHAAILAKVSV 264
            +  YE  A I A V+V
Sbjct: 306 KVLDYESEAPIKAPVAV 322


>gi|166164559|gb|ABY83778.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 620

 Score =  315 bits (808), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 125/275 (45%), Positives = 175/275 (63%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++  P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 466 DNYDNKGIDQLKNIINLIKNGPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 620


>gi|166164555|gb|ABY83776.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 620

 Score =  315 bits (808), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 125/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 620


>gi|114672495|ref|XP_001150304.1| PREDICTED: thymidylate synthase isoform 2 [Pan troglodytes]
          Length = 279

 Score =  315 bits (807), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 120/274 (43%), Positives = 156/274 (56%), Gaps = 38/274 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  + H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY----- 146

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
                          R         + +  MALPPCH L QFYV N +LSCQLYQRSGD+
Sbjct: 147 ---------------RDME------SDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R PR  P++
Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 246 KILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 279


>gi|146276896|ref|YP_001167055.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17025]
 gi|172046015|sp|A4WQT6|TYSY_RHOS5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145555137|gb|ABP69750.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17025]
          Length = 298

 Score =  315 bits (807), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 129/293 (44%), Positives = 172/293 (58%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
             YLDLL  V+  G  R DRTGVGT S FG  +RFDLSKG  P+LTTKKV+WK+ V E+L
Sbjct: 6   QHYLDLLAQVLARGDRRVDRTGVGTLSLFGAMLRFDLSKGAAPILTTKKVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL G +N+  L +  V IW +W                              + G+LGP
Sbjct: 66  WFLTGGTNIRPLLQQNVRIWTDWPLAAYRRATGEEIGQAEFEARIVADEGFAARWGDLGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ ++++LR +P SRR +  AWNVA + +MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWLGPDGREHDQIAGLIETLRTNPASRRMLFHAWNVAEVGQMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS D+ LG PFN    + L +M+A       GE +   GD HLY N
Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQADLLPGELVWVGGDTHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQA  Q+SR+PR  P+M +      +  +R EDF +  YE H AI A+V+V
Sbjct: 246 HLEQAREQISRAPRDWPRMQLVRRAESIDDYRIEDFAVEGYESHPAIAAEVAV 298


>gi|85690907|ref|XP_965853.1| thymidylate synthase [Encephalitozoon cuniculi GB-M1]
 gi|85691163|ref|XP_965981.1| thymidylate synthase [Encephalitozoon cuniculi GB-M1]
 gi|51704239|sp|O62584|TYS1_ENCCU RecName: Full=Thymidylate synthase 1/2; Short=TS 1/2; Short=TSase
           1/2
 gi|266618852|pdb|3KGB|A Chain A, Crystal Structure Of Thymidylate Synthase 12 FROM
           Encephalitozoon Cuniculi At 2.2 A Resolution
 gi|19068420|emb|CAD24888.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1]
 gi|19068548|emb|CAD25016.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1]
          Length = 294

 Score =  315 bits (807), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 137/284 (48%), Positives = 188/284 (66%), Gaps = 22/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDL++H+++ G+ R DRTG GT S FG  MRF L    FPLLTT++V ++ VV ELL
Sbjct: 10  HQYLDLVKHILENGARRMDRTGTGTLSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------ADKDGELGPIYGVQWRSWP------- 102
           +FLRG+++   L + GV IW++              ++G+LGPIYG QWR +        
Sbjct: 70  FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             Y+G  +DQI+S + ++RA+P SRR +VSAWN   +  MALPPCH LFQF V +GKLSC
Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H +    Q+ 
Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQIQ 249

Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R PR  P++ ++P     +   F+YEDF L  Y+PH AI   +S
Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMS 293


>gi|18150851|dbj|BAB83677.1| thymidylate synthase [Homo sapiens]
 gi|119622121|gb|EAX01716.1| thymidylate synthetase, isoform CRA_a [Homo sapiens]
          Length = 279

 Score =  315 bits (807), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 120/274 (43%), Positives = 157/274 (57%), Gaps = 38/274 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVID 110
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY----- 146

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
                          R         + +  MALPPCH L QFYV N +LSCQLYQRSGD+
Sbjct: 147 ---------------RDME------SDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDM 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R PR  P++
Sbjct: 186 GLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 246 RILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 279


>gi|19173335|ref|NP_597138.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1]
 gi|51702027|sp|Q8SRG2|TYS3_ENCCU RecName: Full=Thymidylate synthase 3; Short=TS 3; Short=TSase 3
 gi|19170924|emb|CAD26314.1| THYMIDYLATE SYNTHASE [Encephalitozoon cuniculi GB-M1]
          Length = 294

 Score =  314 bits (806), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 137/284 (48%), Positives = 188/284 (66%), Gaps = 22/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDL++H+++ G+ R DRTG GT S FG  MRF L    FPLLTT++V ++ VV ELL
Sbjct: 10  HQYLDLVKHILENGARRMDRTGTGTLSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------ADKDGELGPIYGVQWRSWP------- 102
           +FLRG+++   L + GV IW++              ++G+LGPIYG QWR +        
Sbjct: 70  FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             Y+G  +DQI+S + ++RA+P SRR +VSAWN   +  MALPPCH LFQF V +GKLSC
Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H +    Q+ 
Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQVQ 249

Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R PR  P++ ++P     +   F+YEDF L  Y+PH AI   +S
Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMS 293


>gi|296125219|ref|YP_003632471.1| thymidylate synthase [Brachyspira murdochii DSM 12563]
 gi|296017035|gb|ADG70272.1| thymidylate synthase [Brachyspira murdochii DSM 12563]
          Length = 266

 Score =  314 bits (806), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 137/266 (51%), Positives = 178/266 (66%), Gaps = 2/266 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
           M  YL+LL+ V++ G +  DRTGVGTR  F  Q+RF       P++TTK+V  K V+ EL
Sbjct: 1   MKNYLELLKKVLEEGEETLDRTGVGTRRIFAPQLRFKFEGNKIPIITTKRVFMKGVIIEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           LWFL+G +N+ +L  + V IWDEWAD  GELGP+YG QWR+W   +GN IDQIS+IV +L
Sbjct: 61  LWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNIVNTL 120

Query: 120 RADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVFLGIPFNI 178
           R +P SRR+I++AWNV  IDKM LPPCH + QF V+N G +   LYQRS D+FLG+PFNI
Sbjct: 121 RNNPTSRRNILNAWNVGEIDKMHLPPCHMMCQFSVNNKGGIIAHLYQRSADLFLGVPFNI 180

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           +SY++LT +LA   G    E I T GD H+YNNH EQ  LQLSR P      +   N  +
Sbjct: 181 SSYAILTRLLAMHSGLHASELIMTFGDAHIYNNHIEQVKLQLSREPYENTTELFIENRPN 240

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           + S  YEDF L  Y+ +  I  +V+V
Sbjct: 241 IFSHVYEDFRLEGYKYYPTIKGEVAV 266


>gi|328862602|gb|EGG11703.1| hypothetical protein MELLADRAFT_51590 [Melampsora larici-populina
           98AG31]
          Length = 302

 Score =  314 bits (806), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 130/292 (44%), Positives = 172/292 (58%), Gaps = 29/292 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKGF-PLLTTKKVHWKSVVHEL 59
           HQYLDL+R VI  G  R DRTG GTRS F   Q+RF L+    PLLTTKKV  K+++HEL
Sbjct: 11  HQYLDLVRRVIDQGQHRPDRTGTGTRSLFAPPQLRFTLTDSTLPLLTTKKVFTKAIIHEL 70

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP----- 102
           LWF++G ++   L   GV+IW+    K            +G+LGPIYG QWR +      
Sbjct: 71  LWFIKGSTSSLDLSSKGVNIWNGNGSKKYLESIGLDQRSEGDLGPIYGFQWRHFGARYKT 130

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY    IDQ+   ++ ++++P  RR I++AWN + + KMALPPCH   QFYV     
Sbjct: 131 FQDDYTDQGIDQLKECIEKIKSNPTDRRIILTAWNPSDLSKMALPPCHMFCQFYVTLADD 190

Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                +LSC LYQRS D+ LG+PFNIASY+LL  M++ V   +  E I  LGD HLYN+H
Sbjct: 191 QNPKPRLSCILYQRSADIGLGLPFNIASYALLVHMISQVTSTEPYELIIQLGDAHLYNDH 250

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                 QL R PR  P++ +   + D+  F YEDF +  Y+PH  I   +SV
Sbjct: 251 LGPIQTQLDRQPRPFPKIKLREQVHDIDGFVYEDFQISEYDPHPKIEMAMSV 302


>gi|170116608|ref|XP_001889494.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635496|gb|EDQ99802.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 308

 Score =  314 bits (805), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 127/295 (43%), Positives = 168/295 (56%), Gaps = 32/295 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59
            QYL L+R V+  G  R DRTG GT + F    +RF L+    PLLTTK+   + +V EL
Sbjct: 14  QQYLQLIRRVLDAGDIRPDRTGTGTIAIFAPPSLRFSLADSTLPLLTTKRTFMRGIVEEL 73

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP----- 102
           LWF+ G ++ + L + GV IWD    K            +G+LGP+YG QWR +      
Sbjct: 74  LWFVHGSTDSTILSKKGVKIWDGNGSKAFLEGRGLGHRREGDLGPVYGFQWRHFGAEYVD 133

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ+   ++ ++ +P  RR I+SAWN   I +MALPPCH L QFYV     
Sbjct: 134 CDKDYTGQGVDQLRECIKKIKENPTDRRIILSAWNPKDIPQMALPPCHMLCQFYVHLPPA 193

Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  KLSC +YQRS D+ LGIPFNIASY+LLT M+A V G    E I  LGD H+Y 
Sbjct: 194 SDPTQKPKLSCLMYQRSADLGLGIPFNIASYALLTHMIAHVTGTTAHELIIQLGDAHVYR 253

Query: 211 NHFEQADLQLSRSPRTLPQM-IINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +H +  + QL R PR  P++     NI D+  F Y DF +  YEPH +I  K+S+
Sbjct: 254 DHVDALEEQLKREPRPFPKLRWARDNIDDIEDFVYSDFVVEGYEPHPSIAMKMSI 308


>gi|261192532|ref|XP_002622673.1| thymidylate synthase [Ajellomyces dermatitidis SLH14081]
 gi|239589548|gb|EEQ72191.1| thymidylate synthase [Ajellomyces dermatitidis SLH14081]
 gi|239615262|gb|EEQ92249.1| thymidylate synthase [Ajellomyces dermatitidis ER-3]
 gi|327353622|gb|EGE82479.1| thymidylate synthase [Ajellomyces dermatitidis ATCC 18188]
          Length = 363

 Score =  314 bits (805), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 133/316 (42%), Positives = 177/316 (56%), Gaps = 53/316 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK--------------GFPLLT 46
           HQYL+L+R +++ G  R DRTG GTRS F   Q+RF LSK                PLLT
Sbjct: 48  HQYLNLIRSILEAGEYRPDRTGTGTRSLFAPPQLRFSLSKPNTSNSASTSSRTPILPLLT 107

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+Y
Sbjct: 108 TKRVFLRAVLAELLWFISGCTSSLPLSEAGIKIWDGNGSREYLDSVGLSHRPVGDLGPVY 167

Query: 95  GVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           G QWR +         DY G  +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC
Sbjct: 168 GFQWRHFGAEYIDAQTDYAGQGVDQIAEVVRKLKDNPYDRRIILSAWNPADLKKMALPPC 227

Query: 147 HCLFQFYV---------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           H   QFYV                 G LSCQLYQRS D+ LG+PFNIASY+LLT MLA  
Sbjct: 228 HMFAQFYVSFPPGDHGHDGRGEKRKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHA 287

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFT 248
                G  IHT+GD H+Y +H E    QL+R P   P++II  +      +  ++ E+F 
Sbjct: 288 ADLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGVMDGWKEEEFE 347

Query: 249 LRSYEPHAAILAKVSV 264
           +  Y+PH  I  K+SV
Sbjct: 348 VVGYKPHKGIKMKMSV 363


>gi|332558834|ref|ZP_08413156.1| thymidylate synthase [Rhodobacter sphaeroides WS8N]
 gi|332276546|gb|EGJ21861.1| thymidylate synthase [Rhodobacter sphaeroides WS8N]
          Length = 298

 Score =  314 bits (805), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 126/293 (43%), Positives = 173/293 (59%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDLL   ++ G  R DRTGVGT S FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 6   QQYLDLLTQTLERGDRRVDRTGVGTLSLFGAMLRFDLSDGQVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL G +N+  L +  V IW +W                              + GELGP
Sbjct: 66  WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEQISQAAFEQRILEDEAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI++++++LR +P SRR +  AWNVA + +MALPPCH ++Q+
Sbjct: 126 VYGRQWRRWLGPDGREHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS D+ LG PFN    + L +M+A   G   G+ +   GD HLY N
Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWMGGDTHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q  R+PR  P+M +      +  +R EDF +  Y+PH AI A+V+V
Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298


>gi|166164557|gb|ABY83777.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 620

 Score =  314 bits (805), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 125/275 (45%), Positives = 176/275 (64%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 406 FIRGETNGNILLNKNVRIWEANGTREFLDNRNLFDREANDLGPIYGFQWRHFGAEYTNMY 465

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLT 585

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 586 RIPYPFPTLKLNPEIKNVEDFTISDFTIENYVHHD 620


>gi|77463962|ref|YP_353466.1| thymidylate synthase [Rhodobacter sphaeroides 2.4.1]
 gi|123591492|sp|Q3J0W9|TYSY_RHOS4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|77388380|gb|ABA79565.1| thymidylate synthase [Rhodobacter sphaeroides 2.4.1]
          Length = 298

 Score =  314 bits (804), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 126/293 (43%), Positives = 174/293 (59%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDLL   ++ G  R DRTGVGT S FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 6   QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSGGQVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL G +N+  L +  V IW +W                              + GELGP
Sbjct: 66  WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEEISQAAFEQRVLEDEAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG+  DQI++++++LR +P SRR +  AWNVA + +MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWLGPDGHEHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS D+ LG PFN    + L +M+A   G   G+ +   GD HLY N
Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q  R+PR  P+M +      +  +R EDF +  Y+PH AI A+V+V
Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298


>gi|225556281|gb|EEH04570.1| thymidylate synthase [Ajellomyces capsulatus G186AR]
          Length = 369

 Score =  314 bits (804), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 133/323 (41%), Positives = 175/323 (54%), Gaps = 60/323 (18%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46
           HQYL L+R +++ G  R DRTG GTRS F   Q+RF LSK                PLLT
Sbjct: 47  HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+Y
Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166

Query: 95  GVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           G QWR +         DY G  +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC
Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226

Query: 147 HCLFQFYVDNG----------------------KLSCQLYQRSGDVFLGIPFNIASYSLL 184
           H   QFYV                          LSCQLYQRS D+ LG+PFNIASY+LL
Sbjct: 227 HMFAQFYVSFPAGDRDDGGEEGEEKNEKEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLS 241
           T MLA       G  IHT+GD H+Y +H E    QL+R P   P++II  +      +  
Sbjct: 287 THMLAHAADLHPGTLIHTMGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMDG 346

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
           ++ E+F +  Y+PH  I  K+SV
Sbjct: 347 WKEEEFEVVGYKPHKGIKMKMSV 369


>gi|58260182|ref|XP_567501.1| thymidylate synthase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116550|ref|XP_772947.1| hypothetical protein CNBJ2230 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|1174839|sp|P45351|TYSY_CRYNE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|83753957|pdb|2AAZ|A Chain A, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753958|pdb|2AAZ|B Chain B, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753959|pdb|2AAZ|C Chain C, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753960|pdb|2AAZ|D Chain D, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753961|pdb|2AAZ|E Chain E, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753962|pdb|2AAZ|F Chain F, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753963|pdb|2AAZ|G Chain G, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753964|pdb|2AAZ|H Chain H, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753965|pdb|2AAZ|I Chain I, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753966|pdb|2AAZ|J Chain J, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753967|pdb|2AAZ|K Chain K, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753968|pdb|2AAZ|L Chain L, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753969|pdb|2AAZ|M Chain M, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753970|pdb|2AAZ|N Chain N, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753971|pdb|2AAZ|O Chain O, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|83753972|pdb|2AAZ|P Chain P, Cryptococcus Neoformans Thymidylate Synthase Complexed
           With Substrate And An Antifolate
 gi|602128|gb|AAC48931.1| thymidylate synthase [Cryptococcus neoformans var. neoformans]
 gi|50255567|gb|EAL18300.1| hypothetical protein CNBJ2230 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229551|gb|AAW45984.1| thymidylate synthase [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 317

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 121/296 (40%), Positives = 164/296 (55%), Gaps = 34/296 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59
           +QYLDL+R +I  G  R DRTG GT + F     RF L+    PLLTTK+V  + V+ EL
Sbjct: 21  YQYLDLIRRIINVGEVRPDRTGTGTVALFAPPSFRFSLADNTLPLLTTKRVFLRGVIAEL 80

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ G ++   L   GV IWD    K+            G+LGP+YG QWR +      
Sbjct: 81  LWFVSGCTDAKMLSSQGVGIWDGNGSKEFLEKVGLGHRREGDLGPVYGFQWRHFGAEYTD 140

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ+  ++ +++ +P  RR I+SAWN   +  MALPPCH   QF+V     
Sbjct: 141 ADGDYKGKGVDQLQRVIDTIKNNPTDRRIILSAWNPKDLPLMALPPCHMFCQFFVSLPPA 200

Query: 156 -----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
                  KLSC +YQRS D+ LG+PFNIASY+LLT M+A +   +  EFI  +GD H+Y 
Sbjct: 201 DSPGSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYR 260

Query: 211 NHFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           +H E    QL R PR  P++        I D+  F+ EDF +  Y+P   I  K+S
Sbjct: 261 DHVEPLKTQLEREPRDFPKLKWARSKEEIGDIDGFKVEDFVVEGYKPWGKIDMKMS 316


>gi|148556688|ref|YP_001264270.1| thymidylate synthase [Sphingomonas wittichii RW1]
 gi|172048261|sp|A5VCW6|TYSY_SPHWW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148501878|gb|ABQ70132.1| thymidylate synthase [Sphingomonas wittichii RW1]
          Length = 308

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 124/302 (41%), Positives = 167/302 (55%), Gaps = 39/302 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLD +      G +R DRTGVGT+S FG  MRFDLS G  PL+TTKK+ WKS + EL+
Sbjct: 7   QQYLDAMARAWYGGDERVDRTGVGTKSLFGVTMRFDLSDGTVPLITTKKIFWKSAIKELI 66

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL GD+N+  L    V IW +W                              + G+LGP
Sbjct: 67  WFLSGDTNIRPLVMQNVHIWTDWPLDKYRKATGEAIDRDAFERRIVDDPAFAAEWGDLGP 126

Query: 93  IYGVQWRSWPDY----------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
           +YG QW  WP Y          +   ++QI+ +V  LRA+P SRR I + WNV  +  MA
Sbjct: 127 VYGKQWVDWPRYTPAGDGLFRREEKGVNQIAELVGMLRANPSSRRLIFTGWNVPELPGMA 186

Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           LPPCH  +Q++V  G+LS  LYQRS D+ LG PFNI   ++L  MLA     + GE +  
Sbjct: 187 LPPCHMTYQYHVAGGRLSGILYQRSCDLGLGFPFNIFEAAVLIRMLAQQADLEPGELVWM 246

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
             D H+Y+NH    + QLSRSPR  P++ +     D+ S+  +DF +  Y+PH  I A+V
Sbjct: 247 GADTHVYSNHGHLVEEQLSRSPRPFPRLSLARKPADMFSYALDDFVIEGYDPHPHIKAEV 306

Query: 263 SV 264
           +V
Sbjct: 307 AV 308


>gi|12230765|sp|Q9P4T7|TYSY_AGABI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|8918939|emb|CAB96042.1| thymidylate synthase [Agaricus bisporus]
          Length = 296

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 126/291 (43%), Positives = 164/291 (56%), Gaps = 29/291 (9%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           QYL L+R V+  G  R DRTG GT S F    +RF L +   PLLTTK+   + +V ELL
Sbjct: 6   QYLHLIRRVLDTGDLRPDRTGTGTISLFAPPNLRFSLRESTVPLLTTKRTFLRGIVEELL 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP------ 102
           WF  G ++   L   GV IWD    K            +G+LGP+YG QWR +       
Sbjct: 66  WFTNGLTDSKILSDKGVKIWDGNGSKAFLESRGLGHRREGDLGPVYGFQWRHFGAEYEDC 125

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------ 154
             DY G  +DQ+   ++ ++ +P  RR I+SAWN   I  MALPPCH L QFYV      
Sbjct: 126 DADYAGKGVDQLRECIRKIKENPTDRRIILSAWNPKDIPSMALPPCHMLCQFYVHLPADT 185

Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
              +LSC ++QRS D+ LGIPFNIASY+LLT M+A V G    E I  LGD H+Y +H E
Sbjct: 186 AKPELSCLMFQRSADLGLGIPFNIASYALLTHMIAHVTGTTARELIIQLGDAHVYRDHVE 245

Query: 215 QADLQLSRSPRTLPQMIINPN-IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             ++QL R PR  P++    + I D+  F Y DF +  Y PH +I  K+SV
Sbjct: 246 ALEVQLQREPRPFPKLRWARDGITDIEDFEYSDFVIEGYNPHPSIAMKMSV 296


>gi|166164561|gb|ABY83779.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 620

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 124/275 (45%), Positives = 175/275 (63%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 346 YQYLNIIYDVMINGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFIRGIIEELLW 405

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+ G++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 406 FIGGETNGNILLNKNVRIWEANGTREFLDNRNLFDREVNDLGPIYGFQWRHFGAEYTNMY 465

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +YD   IDQ+ +I+  ++ +P SRR I+ AWNV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 466 DNYDNKGIDQLKNIINLIKNEPLSRRIILCAWNVKDLDKMALPPCHILCQFYIFDGKLSC 525

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 526 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 585

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 586 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 620


>gi|221639818|ref|YP_002526080.1| Thymidylate synthase [Rhodobacter sphaeroides KD131]
 gi|221160599|gb|ACM01579.1| Thymidylate synthase [Rhodobacter sphaeroides KD131]
          Length = 298

 Score =  313 bits (803), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 126/293 (43%), Positives = 174/293 (59%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDLL   ++ G  R DRTGVGT S FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 6   QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSGGQVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL G +N+  L +  V IW +W                              + GELGP
Sbjct: 66  WFLAGGTNIRPLLQENVRIWSDWPLAAYRRESGEQISQAAFEQRILEDEAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG+  DQI++++++LR +P SRR +  AWNVA + +MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWLGPDGHEHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS D+ LG PFN    + L +M+A   G   G+ +   GD HLY N
Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q  R+PR  P+M +      +  +R EDF +  Y+PH AI A+V+V
Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRRADSIDDYRIEDFAVEGYDPHPAIAAEVAV 298


>gi|295657856|ref|XP_002789493.1| thymidylate synthase [Paracoccidioides brasiliensis Pb01]
 gi|226283762|gb|EEH39328.1| thymidylate synthase [Paracoccidioides brasiliensis Pb01]
          Length = 360

 Score =  313 bits (803), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 132/313 (42%), Positives = 176/313 (56%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49
           HQYL+L+R ++  G +R DRTG GTRS F   Q+RF LSK             PLLTTK+
Sbjct: 48  HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGFSSPSSRTPILPLLTTKR 107

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG Q
Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSEAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH  
Sbjct: 168 WRYFGAEYIDAQTDYTGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227

Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
            QFYV                 G LSCQLYQRS D+ LG+PFNIASY+LLT MLA     
Sbjct: 228 AQFYVSFPSHGGNSEGGYEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRS 251
             G  IHT+GD H+Y +H E    QL R P   P+++I  +      +  ++ E+F +  
Sbjct: 288 YPGTLIHTMGDAHVYLDHIEALQEQLKREPVDFPELVIKRDDRGSGVMDGWKEEEFEVVG 347

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I  K+S+
Sbjct: 348 YKPHKGIKMKMSI 360


>gi|115299504|gb|ABI93722.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
          Length = 369

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 127/267 (47%), Positives = 168/267 (62%), Gaps = 21/267 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLD++R ++K G  + DRTGVGT S FG  MRF+L++ FPLLTTKKV ++  V ELLW
Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGAVEELLW 163

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           FLRGD+N   L   GV IW+    ++             +LGP+YG QWR +        
Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY+   +DQ+  ++Q L+ +P SRR I+SAWN + +++MALPPCH + QF+V NGKLSC
Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLEQMALPPCHVMSQFFVANGKLSC 283

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LGIPFNIASY+LLT MLA       GEF+H LGD H+Y+NH +    Q+ 
Sbjct: 284 MMYQRSCDLGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFT 248
           R P   P + I      L    YEDF 
Sbjct: 344 RVPYPFPILKIKSQ-KSLFDHTYEDFE 369


>gi|115524163|ref|YP_781074.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
 gi|115518110|gb|ABJ06094.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
          Length = 300

 Score =  313 bits (802), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 135/293 (46%), Positives = 176/293 (60%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDLL  V++ G  R DRTGVGTR+ FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 8   HQYLDLLAQVLEKGDQRIDRTGVGTRALFGAMIRFDLSDGRVPILTTKRVYWKTAVKEML 67

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL G +N+  L +  V IW +W                              + G+LGP
Sbjct: 68  WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDSISQEDFEKRVVEDNAFATRWGDLGP 127

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +VQ+L+++P SRR +  AWN   +  MALPPCH ++Q+
Sbjct: 128 VYGKQWRRWLGADGREYDQIAELVQTLKSNPASRRMLFHAWNPPELGAMALPPCHMVYQY 187

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +GKL+C LYQRS D+ LG  FN A+ S L +MLA       GEFI   GDVHLY N
Sbjct: 188 HVTSSGKLNCILYQRSCDLLLGAAFNYAAASALQLMLAQQADLTPGEFIWFGGDVHLYLN 247

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q+SR+PR  P M +      +  +R  DF +  YEPHAAI A V+V
Sbjct: 248 HLDQAREQISRAPRPFPTMRLTRRPDSIDGYRISDFEVDGYEPHAAIKADVAV 300


>gi|116204425|ref|XP_001228023.1| hypothetical protein CHGG_10096 [Chaetomium globosum CBS 148.51]
 gi|88176224|gb|EAQ83692.1| hypothetical protein CHGG_10096 [Chaetomium globosum CBS 148.51]
          Length = 348

 Score =  313 bits (802), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 127/325 (39%), Positives = 171/325 (52%), Gaps = 62/325 (19%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R ++  G  R DRTG GT S F    ++F L++      PLLTTK+V  K+V+
Sbjct: 24  YQYLDLVREILDEGELRSDRTGTGTYSIFAPRPLKFSLNRDGVPILPLLTTKRVFTKAVI 83

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102
            ELLWF+ GD++   L   GV IWD    ++            G+LGP+YG QWR +   
Sbjct: 84  AELLWFISGDTSSHTLSSQGVKIWDGNGSREFLDKLGLTSRAEGDLGPVYGFQWRHFGAQ 143

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154
                 DY G  +DQ++ IV +LR +P+ RR ++SAWN A +  M LPPCH   QFYV  
Sbjct: 144 YVDSATDYTGKGVDQLARIVHTLRTNPFDRRLVLSAWNPADMPSMVLPPCHMFAQFYVSY 203

Query: 155 ---------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
                                        G L+CQLYQRS D+ LG+PFNIASY+LLT M
Sbjct: 204 PGGARRSHTTTTTTTNPEQTPTPPPAKSKGHLNCQLYQRSCDMGLGVPFNIASYALLTHM 263

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV--------DL 239
           LA V     G   H +GD H+Y NH E    QL R PR  P++ I+             +
Sbjct: 264 LAHVCDLVPGSLTHVMGDAHVYLNHVEALQTQLEREPRPFPELEISEERQGRGPAEERSI 323

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             ++ EDF ++ Y PH  I  ++SV
Sbjct: 324 DGWKAEDFLIKGYNPHKIIPMEMSV 348


>gi|332225955|ref|XP_003262153.1| PREDICTED: thymidylate synthase-like [Nomascus leucogenys]
          Length = 251

 Score =  313 bits (802), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 115/246 (46%), Positives = 153/246 (62%), Gaps = 20/246 (8%)

Query: 39  SKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD----------- 87
           S  FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D           
Sbjct: 6   SDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTRE 65

Query: 88  -GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
            G+LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN   +
Sbjct: 66  EGDLGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDL 125

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
             MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+
Sbjct: 126 PLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGD 185

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           FIHTLGD H+Y NH E   +QL R PR  P++ I   +  +  F+ EDF +  Y PH  I
Sbjct: 186 FIHTLGDAHVYLNHIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFQIEGYNPHPTI 245

Query: 259 LAKVSV 264
             +++V
Sbjct: 246 KMEMAV 251


>gi|224471863|sp|Q07PP0|TYSY_RHOP5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 298

 Score =  313 bits (802), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 135/293 (46%), Positives = 176/293 (60%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDLL  V++ G  R DRTGVGTR+ FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 6   HQYLDLLAQVLEKGDQRIDRTGVGTRALFGAMIRFDLSDGRVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL G +N+  L +  V IW +W                              + G+LGP
Sbjct: 66  WFLTGQTNIQALLKENVRIWSDWPLARYRKETGDSISQEDFEKRVVEDNAFATRWGDLGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +VQ+L+++P SRR +  AWN   +  MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWLGADGREYDQIAELVQTLKSNPASRRMLFHAWNPPELGAMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +GKL+C LYQRS D+ LG  FN A+ S L +MLA       GEFI   GDVHLY N
Sbjct: 186 HVTSSGKLNCILYQRSCDLLLGAAFNYAAASALQLMLAQQADLTPGEFIWFGGDVHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q+SR+PR  P M +      +  +R  DF +  YEPHAAI A V+V
Sbjct: 246 HLDQAREQISRAPRPFPTMRLTRRPDSIDGYRISDFEVDGYEPHAAIKADVAV 298


>gi|61207195|gb|AAX40328.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  312 bits (801), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 166/263 (63%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG+++   L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 289 WFLRGETHAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|320586368|gb|EFW99047.1| thymidylate synthase [Grosmannia clavigera kw1407]
          Length = 316

 Score =  312 bits (801), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 126/306 (41%), Positives = 168/306 (54%), Gaps = 44/306 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R ++  G  R DRTG GT S F     +F LS       PLLTTK+V  + V+
Sbjct: 10  YQYLDLVREILDSGERRPDRTGTGTLSIFAPRPFKFQLSDNGRLVLPLLTTKRVFHRGVI 69

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-- 102
            ELLWF++G+++   L   G+ IWD    ++            G+LGP+YG QWR +   
Sbjct: 70  AELLWFIQGNTSSLALSNAGIKIWDGNGSREFLDSVGLSHRAEGDLGPVYGFQWRHFGAE 129

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD- 155
                 DY    +DQ++ ++  LR DPY+RR I+SAWN   +  MALPPCH   QFYV  
Sbjct: 130 YVDASTDYTSQGVDQLADVIHKLRTDPYNRRIILSAWNPKDLPSMALPPCHMFAQFYVSF 189

Query: 156 -----------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
                             G L CQLYQRS D+ LG+PFNIASY+LLT MLA V     G 
Sbjct: 190 PRQDQGQEDSSKDTQKVKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGS 249

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAA 257
           F H +GD H+Y +H E    QL R PR  PQ+ I  ++   +  ++ EDF ++ Y PH  
Sbjct: 250 FTHVMGDAHIYIDHAEALQTQLEREPREFPQLEIMRDVGGSIDGWKEEDFVIKGYTPHKP 309

Query: 258 ILAKVS 263
           I  K+S
Sbjct: 310 IAMKMS 315


>gi|3097066|emb|CAA06648.1| thymidylate synthase [Encephalitozoon cuniculi]
          Length = 294

 Score =  312 bits (801), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 136/284 (47%), Positives = 187/284 (65%), Gaps = 22/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           HQYLDL++H+++ G+ R DRTG G  S FG  MRF L    FPLLTT++V ++ VV ELL
Sbjct: 10  HQYLDLVKHILENGARRMDRTGTGALSVFGATMRFSLEDNTFPLLTTRRVFYRGVVEELL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW-----------ADKDGELGPIYGVQWRSWP------- 102
           +FLRG+++   L + GV IW++              ++G+LGPIYG QWR +        
Sbjct: 70  FFLRGETDSKVLEKKGVRIWEKNGAKQFLQSVGIDREEGDLGPIYGFQWRHFGARYETSA 129

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
             Y+G  +DQI+S + ++RA+P SRR +VSAWN   +  MALPPCH LFQF V +GKLSC
Sbjct: 130 SSYEGKGVDQIASAIAAIRANPASRRIVVSAWNPTDLGSMALPPCHVLFQFNVTDGKLSC 189

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRSGD+ LG+PFNIASYSLLT+++A + G Q GEF+H LGD H+Y +H +    Q+ 
Sbjct: 190 AMYQRSGDMGLGVPFNIASYSLLTILVAHLTGLQPGEFVHFLGDAHVYLDHVDSLRQQIQ 249

Query: 222 RSPRTLPQMIINPN--IVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           R PR  P++ ++P     +   F+YEDF L  Y+PH AI   +S
Sbjct: 250 RPPRAFPKLFVSPKGPRTEPEHFQYEDFELVGYDPHPAIKMNMS 293


>gi|126640531|ref|YP_001083515.1| thymidylate synthase [Acinetobacter baumannii ATCC 17978]
          Length = 247

 Score =  312 bits (801), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 136/247 (55%), Positives = 173/247 (70%), Gaps = 16/247 (6%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD-------- 85
           MRFDLSKGFPLLTTKKVH++S+V ELLWFL+GD+NV YL  + V+IWDEWA         
Sbjct: 1   MRFDLSKGFPLLTTKKVHFRSIVIELLWFLKGDTNVKYLQDNKVTIWDEWATAEQTARFG 60

Query: 86  -KDGELGPIYGVQWRSWP-------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
             + ELGP+YG QWR++         Y+ +  DQI  ++  ++ +P SRR IVS WN   
Sbjct: 61  RPEHELGPVYGHQWRNFGATKNADGTYNQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNE 120

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             ++ALPPCH LFQF+V + KLSCQLYQRS DVFLG+PFNIASY+LLT M+A V G   G
Sbjct: 121 AGQVALPPCHTLFQFFVQDNKLSCQLYQRSADVFLGVPFNIASYALLTHMIAQVCGLDVG 180

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           +F+ T GD HLY NHFEQA LQL+R P  L Q+ +NP++ D+  F++ED  +  YE H A
Sbjct: 181 DFVWTGGDTHLYANHFEQAKLQLTREPLPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPA 240

Query: 258 ILAKVSV 264
           I A V+V
Sbjct: 241 IKAPVAV 247


>gi|126462805|ref|YP_001043919.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17029]
 gi|171855224|sp|A3PLD1|TYSY_RHOS1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|126104469|gb|ABN77147.1| thymidylate synthase [Rhodobacter sphaeroides ATCC 17029]
          Length = 298

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 126/293 (43%), Positives = 173/293 (59%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDLL   ++ G  R DRTGVGT S FG  +RFDLS G  P+LTTK+V+WK+ V E+L
Sbjct: 6   QQYLDLLAQTLERGDRRVDRTGVGTLSLFGAMLRFDLSDGQVPILTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL G +N+  L +  V IW +W                              + GELGP
Sbjct: 66  WFLTGGTNIRPLLQENVRIWSDWPLAAYRRESGEEISQAAFEQRILEDEAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI++++++LR +P SRR +  AWNVA + +MALPPCH ++Q+
Sbjct: 126 VYGRQWRRWLGPDGREHDQIAALIETLRTNPSSRRMLFHAWNVAEVGQMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+  LYQRS D+ LG PFN    + L +M+A   G   G+ +   GD HLY N
Sbjct: 186 HVTSDGRLNALLYQRSVDLLLGAPFNFVGAAALQLMIAQQAGLVPGDLVWVGGDTHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H +QA  Q  R+PR  P+M +      +  +R EDF +  Y+PH AI A+V+V
Sbjct: 246 HLDQAREQTGRAPRDWPRMRLLRQADGIDDYRIEDFAVEGYDPHPAIAAEVAV 298


>gi|61207219|gb|AAX40340.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  312 bits (799), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 124/263 (47%), Positives = 166/263 (63%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A V G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKVTGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|166164567|gb|ABY83782.1| dihydrofolate reductase-thymidylate synthase [Plasmodium ovale]
          Length = 622

 Score =  312 bits (799), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 123/275 (44%), Positives = 175/275 (63%), Gaps = 20/275 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  V+  G+ + DRTGVG  S FGY M+++L++ FPLLTTKK+  + ++ ELLW
Sbjct: 348 YQYLNIIYDVMMNGNKQDDRTGVGVLSKFGYMMKYNLAEYFPLLTTKKLFVRGIIEELLW 407

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           F+RG++N + L    V IW+    ++             +LGPIYG QWR +        
Sbjct: 408 FIRGETNGNILLNKNVRIWEANGTREFLDNRKLFDREVNDLGPIYGFQWRHFGAEYTNMY 467

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            +Y+   IDQ+ +I+  ++ +P SRR I+ A NV  +DKMALPPCH L QFY+ +GKLSC
Sbjct: 468 DNYENKGIDQLKNIINLIKNEPTSRRIILCARNVKDLDKMALPPCHILCQFYIFDGKLSC 527

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D+ LG+PFNIASYS+ T MLA V   Q  EFIH LG+ H+YNNH +   +QL+
Sbjct: 528 IMYQRSCDLGLGVPFNIASYSIFTYMLAQVCNLQPAEFIHVLGNAHIYNNHIDSLKIQLN 587

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           R P   P + +NP I ++  F   DFT+ +Y  H 
Sbjct: 588 RIPYPFPTLKLNPEIKNIEDFTISDFTIENYVHHD 622


>gi|61207215|gb|AAX40338.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  312 bits (799), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDSGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|115299506|gb|ABI93723.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
          Length = 369

 Score =  312 bits (799), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 127/267 (47%), Positives = 167/267 (62%), Gaps = 21/267 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYLD++R ++K G  + DRTGVGT S FG  MRF+L++ FPLLTTKKV ++ VV ELL 
Sbjct: 104 NQYLDMIRKIMKEGVHKDDRTGVGTISIFGQTMRFNLAESFPLLTTKKVFFRGVVEELLR 163

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------- 102
           FLRGD+N   L   GV IW+    ++             +LGP+YG QWR +        
Sbjct: 164 FLRGDTNGKILLDKGVKIWEGNGTREYLDSIGLSNRQEHDLGPVYGYQWRHFGAEYKDCQ 223

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY+   +DQ+  ++Q L+ +P SRR I+SAWN + + +MALPPCH + QF+V NGKLSC
Sbjct: 224 SDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQMALPPCHVMSQFFVANGKLSC 283

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +YQRS D  LGIPFNIASY+LLT MLA       GEF+H LGD H+Y+NH +    Q+ 
Sbjct: 284 MMYQRSCDFGLGIPFNIASYALLTQMLAKECNLNLGEFVHVLGDTHIYSNHVDALKRQIE 343

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFT 248
           R P   P + I      L  + YEDF 
Sbjct: 344 RVPYPFPILKIKSK-KSLFDYTYEDFE 369


>gi|61207207|gb|AAX40334.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207209|gb|AAX40335.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207211|gb|AAX40336.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207213|gb|AAX40337.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207221|gb|AAX40341.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  311 bits (798), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|14599974|gb|AAK71186.1|AF358968_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma
           vespertilionis]
          Length = 491

 Score =  311 bits (798), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E    QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCKEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490


>gi|14599890|gb|AAK71144.1|AF358926_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599892|gb|AAK71145.1|AF358927_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599894|gb|AAK71146.1|AF358928_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599896|gb|AAK71147.1|AF358929_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599898|gb|AAK71148.1|AF358930_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599900|gb|AAK71149.1|AF358931_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599904|gb|AAK71151.1|AF358933_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599906|gb|AAK71152.1|AF358934_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599908|gb|AAK71153.1|AF358935_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599912|gb|AAK71155.1|AF358937_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599914|gb|AAK71156.1|AF358938_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599916|gb|AAK71157.1|AF358939_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599918|gb|AAK71158.1|AF358940_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599922|gb|AAK71160.1|AF358942_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
          Length = 491

 Score =  311 bits (798), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490


>gi|51869967|ref|YP_073520.1| thymidylate synthase [Lymphocystis disease virus - isolate China]
 gi|51858175|gb|AAU10859.1| thymidylate synthase [Lymphocystis disease virus - isolate China]
          Length = 286

 Score =  311 bits (798), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 124/281 (44%), Positives = 175/281 (62%), Gaps = 21/281 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+ L++++  G  + DRTG GT S FG Q R+DLS  FPL TTK++ W+ +V ELLWFL
Sbjct: 7   YLNQLKYILANGRLKIDRTGTGTLSVFGLQNRYDLST-FPLFTTKRMFWRGIVEELLWFL 65

Query: 64  RGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP--------D 103
           +G +N   L +  V IWD +              ++G+LGPIYG QWR +         +
Sbjct: 66  KGSTNSLNLSKKSVHIWDAYGSKSNLNRLGFNHREEGDLGPIYGFQWRHFGANYINCHTN 125

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y+G  IDQ+  I+  L+ +P  RR +++AWN + ID+  LPPCH L QFY  +  LSCQ 
Sbjct: 126 YEGQGIDQLQIIITKLKTNPNDRRILMTAWNPSDIDQAVLPPCHVLCQFYAIDNILSCQC 185

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFN+ASY+LLT ++A  +  + GEFIHTLGD H+Y +H +    QL+RS
Sbjct: 186 YQRSADMGLGVPFNVASYALLTYLIAQAVDMKPGEFIHTLGDAHIYLDHIKAIKEQLTRS 245

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +  P +I+     +L  F++EDF L  Y PH AI   +S+
Sbjct: 246 IKPSPVVILKKKSDNLCDFKFEDFELLDYNPHPAISLDLSI 286


>gi|296283919|ref|ZP_06861917.1| thymidylate synthase [Citromicrobium bathyomarinum JL354]
          Length = 310

 Score =  311 bits (798), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 129/303 (42%), Positives = 172/303 (56%), Gaps = 40/303 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDL+ H+ + G +R DRTG+GTRS FG Q+R  L+    PLLTTK+V+WK+   E L
Sbjct: 8   QQYLDLMAHIWRTGDERVDRTGIGTRSVFGAQLRCSLTDNAVPLLTTKRVYWKTAARETL 67

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD----------------------------KDGELGP 92
           WFL G +N+  L   GV IW+EW                              + G+LGP
Sbjct: 68  WFLTGATNIRPLVLQGVKIWNEWPHARYVKETGDDLPLDDFVQRIADDESFAARWGDLGP 127

Query: 93  IYGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           +YG QW  WP Y          G  IDQ+S ++ SLR +P SRRHI+  WNVA +D+MAL
Sbjct: 128 VYGKQWVDWPTYRYRPDGLYEKGEGIDQVSQVIDSLRTNPGSRRHIIEGWNVAELDRMAL 187

Query: 144 PPCHCLFQFYV--DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
           PPCH  +QF+V  +  +L+C LYQRS DV LG+PFN+   +LLT M+A     + GE + 
Sbjct: 188 PPCHKTYQFHVGANGTQLNCLLYQRSCDVALGLPFNLFGAALLTRMIAQQTDLEPGELVW 247

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
             GD HLY NH    + QL R PR  P++ I      +  +  EDF++  Y+PH  I A 
Sbjct: 248 MGGDTHLYLNHAHLIEEQLGREPRGAPRLEITRRPPGIFDYAIEDFSVSGYDPHPPIKAP 307

Query: 262 VSV 264
           V+V
Sbjct: 308 VAV 310


>gi|61207201|gb|AAX40331.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207203|gb|AAX40332.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207205|gb|AAX40333.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  311 bits (797), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|161622629|ref|YP_001595355.1| dTMP thymidylate synthase [Enterobacteria phage JS98]
 gi|52139835|gb|AAU29207.1| dTMP thymidylate synthase [Enterobacteria phage JS98]
          Length = 285

 Score =  311 bits (797), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 125/290 (43%), Positives = 171/290 (58%), Gaps = 31/290 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L++ +++ G +  DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G +IWDE  +          GELGP+YG QWR +    
Sbjct: 61  WFLSGSTNVNDLRFRTHGSLIDGKTIWDENYENQAKDLGYHSGELGPVYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ+  I+  ++  P  RR IVSAWN A ID+MALPPCHC +QF V NG L  Q YQ
Sbjct: 117 -GGVDQVVEIIDRIKKMPNDRRQIVSAWNPAEIDQMALPPCHCFYQFNVRNGHLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ + + G+ H+Y+NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 235

Query: 226 TLPQMIINPNIVDL-----------LSFRYEDFTLRSYEPHAAILAKVSV 264
            L ++ IN     +            S +  DF L+ YE H  I AK++V
Sbjct: 236 ELCELEINLPEEFILWDTKTQLSWVDSMKPSDFVLKGYESHPTIKAKMAV 285


>gi|61207183|gb|AAX40322.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207185|gb|AAX40323.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207191|gb|AAX40326.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|61207197|gb|AAX40329.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  311 bits (797), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|115611864|ref|XP_001201855.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115615354|ref|XP_796678.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 432

 Score =  311 bits (797), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 117/256 (45%), Positives = 160/256 (62%), Gaps = 21/256 (8%)

Query: 30  FGYQMRFDLSKGFPLLTTKK-VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD- 87
           F +   F LS  FPLLTTK+ V W+ V  ELLWF++G +N + L    + IWD    KD 
Sbjct: 177 FLFTFIFSLSDQFPLLTTKRRVFWRGVAEELLWFVKGCTNATELRDKNIHIWDANGSKDF 236

Query: 88  -----------GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRH 128
                      G+LGP+YG QWR +         DY G  +DQ ++++++++ +   RR 
Sbjct: 237 LEKRGLGHHKEGDLGPVYGFQWRHFGAEYKDRFTDYTGQGVDQHTNVIKTIKNNSDDRRI 296

Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
           I SAWN   + KMALPPCH   QFYV NG+LSCQLYQRSGD+ LG+PFNIASYSLLT M+
Sbjct: 297 ITSAWNPPDLPKMALPPCHAFVQFYVCNGELSCQLYQRSGDMGLGVPFNIASYSLLTYMI 356

Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFT 248
           A V G + G+F+HTLGD H+Y NH E    QL R PR  P++ I   + ++  F++EDF 
Sbjct: 357 AHVTGLKPGDFVHTLGDAHVYLNHIEPLKDQLKRVPRQFPKLNIKRKVTNIDDFKFEDFE 416

Query: 249 LRSYEPHAAILAKVSV 264
           +  Y+P+  I  +++V
Sbjct: 417 IEGYKPYPKITMQMAV 432


>gi|61207189|gb|AAX40325.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  311 bits (797), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|14599920|gb|AAK71159.1|AF358941_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599924|gb|AAK71161.1|AF358943_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599926|gb|AAK71162.1|AF358944_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599928|gb|AAK71163.1|AF358945_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599930|gb|AAK71164.1|AF358946_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599932|gb|AAK71165.1|AF358947_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599950|gb|AAK71174.1|AF358956_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599954|gb|AAK71176.1|AF358958_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599958|gb|AAK71178.1|AF358960_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599962|gb|AAK71180.1|AF358962_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599966|gb|AAK71182.1|AF358964_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
          Length = 491

 Score =  311 bits (797), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490


>gi|14599956|gb|AAK71177.1|AF358959_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
          Length = 491

 Score =  311 bits (797), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490


>gi|302689813|ref|XP_003034586.1| thymidylate synthase [Schizophyllum commune H4-8]
 gi|300108281|gb|EFI99683.1| thymidylate synthase [Schizophyllum commune H4-8]
          Length = 317

 Score =  311 bits (797), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 126/296 (42%), Positives = 168/296 (56%), Gaps = 33/296 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59
           HQYL+L++ V+  G  R DRTG GT + F    +RF L+    PL+TTK+   + +V EL
Sbjct: 22  HQYLELIQRVMDMGEVRADRTGTGTIALFAPPNLRFSLADSTLPLITTKRTFLRGIVEEL 81

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWF+ G ++ + L R  V+IWD    K+            G+LGP+YG QWR +      
Sbjct: 82  LWFIHGCTDSTVLSRKKVTIWDGNGSKEFLEGRGLGHRREGDLGPVYGFQWRHFGAEYKD 141

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ+   +  ++ +P  RR I+SAWN   I  MALPPCH L QFYV     
Sbjct: 142 ADADYTGQGVDQLRECIHKIKHNPTDRRIIMSAWNPKDIPLMALPPCHLLCQFYVHLPPA 201

Query: 156 ------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
                   KLSC +YQRS D+ LG+PFNIASY+LLT M+A V G    E I  LGD H+Y
Sbjct: 202 GAPDTQKPKLSCLMYQRSADLGLGVPFNIASYALLTHMIAHVTGTDAHELIIQLGDAHVY 261

Query: 210 NNHFEQADLQLSRSPRTLPQMIINP-NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +H E    QL R PR  P++     +I D+  F+YEDF +  Y PH +I  K+SV
Sbjct: 262 RDHVEALQTQLQREPRAFPKLRWGRDDIEDIEDFKYEDFVVEGYNPHPSIPMKMSV 317


>gi|14599934|gb|AAK71166.1|AF358948_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599936|gb|AAK71167.1|AF358949_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599938|gb|AAK71168.1|AF358950_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599940|gb|AAK71169.1|AF358951_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599942|gb|AAK71170.1|AF358952_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599944|gb|AAK71171.1|AF358953_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599946|gb|AAK71172.1|AF358954_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599948|gb|AAK71173.1|AF358955_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599952|gb|AAK71175.1|AF358957_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599960|gb|AAK71179.1|AF358961_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599964|gb|AAK71181.1|AF358963_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599968|gb|AAK71183.1|AF358965_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
          Length = 491

 Score =  311 bits (797), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490


>gi|154317591|ref|XP_001558115.1| hypothetical protein BC1G_03147 [Botryotinia fuckeliana B05.10]
 gi|150844321|gb|EDN19514.1| hypothetical protein BC1G_03147 [Botryotinia fuckeliana B05.10]
          Length = 356

 Score =  311 bits (797), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 126/316 (39%), Positives = 172/316 (54%), Gaps = 53/316 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-----KGFPLLTTKKVHWKSV 55
           +QYLDL+R +++ G  R DRTG GT S F    ++F L+        PLLTTK+V  ++V
Sbjct: 41  YQYLDLIREILETGEHRPDRTGTGTISLFAPAPLKFSLTSPTGTPILPLLTTKRVFLRAV 100

Query: 56  VHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP- 102
           + ELLWF+ G ++   L   G+ IWD    +            +G+LGP+YG QWR +  
Sbjct: 101 LTELLWFISGSTSSLPLSAAGIKIWDGNGSRAYLDSIGLSHRAEGDLGPVYGFQWRHFGA 160

Query: 103 -------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD 155
                  DY G  +DQ++ IV  L+ +P+ RR I+SAWNVA I  MALPPCH   QFYV 
Sbjct: 161 KYIDAETDYTGQGVDQLAEIVWKLKNNPWDRRIILSAWNVADIKLMALPPCHMFAQFYVS 220

Query: 156 NGK------------------------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
             K                        L CQLYQRS D+ LG+PFNIASY+LLT +LA  
Sbjct: 221 FPKSSTASSTSEQNTNPSNPDSKPKGILHCQLYQRSCDMGLGVPFNIASYALLTHILAHA 280

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFT 248
                G F HT+GD H+Y +H +   +QL R PR  P++ I         +  ++ E+F 
Sbjct: 281 CDLTPGTFTHTMGDAHVYVDHVDALKVQLEREPREFPELGILREDQGSGVVDGWKPEEFE 340

Query: 249 LRSYEPHAAILAKVSV 264
           +R Y+PH  I  K+SV
Sbjct: 341 VRGYKPHGKIDMKMSV 356


>gi|85708445|ref|ZP_01039511.1| Thymidylate synthase [Erythrobacter sp. NAP1]
 gi|85689979|gb|EAQ29982.1| Thymidylate synthase [Erythrobacter sp. NAP1]
          Length = 322

 Score =  311 bits (796), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 130/304 (42%), Positives = 176/304 (57%), Gaps = 42/304 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYL+L+R + + GS+R DRTG GTRS  G  +R+DL+ G  PLLTTK+V+WK+   E+LW
Sbjct: 19  QYLNLMREIWERGSERMDRTGTGTRSIAGAMLRYDLADGAMPLLTTKRVYWKTATREMLW 78

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93
           FL G++N+  L   GV IW+EW                              + G+LGP+
Sbjct: 79  FLTGETNIRPLVLQGVKIWNEWPHANYVRETGDEIALEDFVKRIADDEGFAKRWGDLGPV 138

Query: 94  YGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144
           YG QW  WP Y          G  I+Q++ +V+SLR +P SRRHI+  WNVA +D+MALP
Sbjct: 139 YGKQWVDWPTYRYRKDGLYEKGEGINQVAEVVESLRNNPGSRRHIIEGWNVAELDRMALP 198

Query: 145 PCHCLFQFYVD----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
           PCH  +QF+V       +L+C LYQRS DV LG+PFN+ S +LLT M+A   G + GE I
Sbjct: 199 PCHKTYQFHVAGAKGKERLNCLLYQRSCDVALGLPFNLWSAALLTRMMAQQTGLEAGELI 258

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260
              GDVHLY NH    + QL+R P   P++ I      +  ++ EDF +  Y P   I A
Sbjct: 259 WMGGDVHLYLNHAHLIEEQLTREPTGNPRLEITRKPETIFDYKIEDFRVDDYAPLPPIKA 318

Query: 261 KVSV 264
            V+V
Sbjct: 319 PVAV 322


>gi|149186677|ref|ZP_01864988.1| thymidylate synthase [Erythrobacter sp. SD-21]
 gi|148829585|gb|EDL48025.1| thymidylate synthase [Erythrobacter sp. SD-21]
          Length = 313

 Score =  311 bits (796), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 134/306 (43%), Positives = 174/306 (56%), Gaps = 43/306 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDL+R +   G +RRDRTG+GTRS FG Q+RFDL++G  PL+TTK+V+WK+   ELL
Sbjct: 8   QQYLDLMRLIWLEGDERRDRTGIGTRSVFGAQLRFDLAEGAMPLVTTKRVYWKTATRELL 67

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK----------------------------DGELGP 92
           WFL GD+N+  L   GV IW+EW                                G+LGP
Sbjct: 68  WFLTGDTNIRPLVLQGVKIWNEWPHARYVEQTGDEIELEAFVQKIADDQQFAAMWGDLGP 127

Query: 93  IYGVQWRSWPDY---------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           +YG QW  WP Y          G  I+Q++ +V+SL  +P SRRHI+  WNVA + +MAL
Sbjct: 128 VYGKQWVDWPTYQPVKGGLFRKGRGINQVAEVVESLNENPGSRRHIIEGWNVAEVPRMAL 187

Query: 144 PPCHCLFQFYVDNGK-----LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
           PPCH  +Q++V  G      L+  LYQRS DV LG+PFN+ S +LL  M+A  +  Q GE
Sbjct: 188 PPCHKTYQYHVSTGIDGEPLLNGILYQRSCDVALGLPFNLWSGALLLRMIAQQVDMQPGE 247

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           F+   GD HLY NH      QLSR P  LP + I      +  +R EDF +  Y PH  I
Sbjct: 248 FVWMGGDTHLYLNHEHLVKEQLSREPHGLPTLEIVRRPPTIFDYRIEDFAVHDYTPHGPI 307

Query: 259 LAKVSV 264
            A V+V
Sbjct: 308 KAPVAV 313


>gi|14599902|gb|AAK71150.1|AF358932_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
 gi|14599910|gb|AAK71154.1|AF358936_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi]
          Length = 491

 Score =  311 bits (796), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 122/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 347

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+ LT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYAFLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 468 KRVPRAFPYLVFRREREFLEDYE 490


>gi|68073909|ref|XP_678869.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Plasmodium berghei strain ANKA]
 gi|56499470|emb|CAH97634.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           [Plasmodium berghei]
          Length = 585

 Score =  310 bits (795), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 124/281 (44%), Positives = 180/281 (64%), Gaps = 20/281 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL+++  +I  G+++ DRTG G  S FGY M+F+L++ FPLLTTKK+  + ++ ELLW
Sbjct: 305 YQYLNIIYDMIMHGNNQDDRTG-GVLSKFGYMMKFNLNEYFPLLTTKKLFIRGIIEELLW 363

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD-----------GELGPIYGVQWRSWP-------- 102
           F+RG++N + L    V IW+    ++            +LGPIYG QWR +         
Sbjct: 364 FIRGETNGNTLLEKNVRIWEANGTREFLDRKLFHREVNDLGPIYGFQWRHFGAEYTDMHD 423

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           +Y    +DQ+ +I+  ++ DP  RR I+ AWNV  +D+MALPPCH L QFYV +GKLSC 
Sbjct: 424 NYKDKGVDQLKNIINLIKNDPTCRRIILCAWNVKDLDQMALPPCHILCQFYVFDGKLSCI 483

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS D+ LG+PFNIASYS+ T M+A V   Q  EFIH LG+ H+YNNH E   +QL+R
Sbjct: 484 MYQRSCDLGLGVPFNIASYSIFTYMIAQVCNLQAAEFIHVLGNAHVYNNHIESLKIQLNR 543

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           +P   P + +NP+I ++  F   DFT+++Y  H  I   ++
Sbjct: 544 TPYPFPTLKLNPDIKNIEDFTISDFTVQNYVHHDKINMDMA 584


>gi|163839708|ref|YP_001624113.1| thymidylate synthase [Renibacterium salmoninarum ATCC 33209]
 gi|162953184|gb|ABY22699.1| thymidylate synthase [Renibacterium salmoninarum ATCC 33209]
          Length = 208

 Score =  310 bits (795), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 126/207 (60%), Positives = 159/207 (76%)

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           ELLWFLRGDSNV +L  +GV IW+EWAD DGELGP+YGVQWRSWP  DG  IDQI+S+++
Sbjct: 2   ELLWFLRGDSNVHWLQENGVKIWNEWADDDGELGPVYGVQWRSWPTPDGQHIDQIASLIE 61

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
           +L+A+P SRRHIVSAWNVA + KMALPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFN
Sbjct: 62  ALKANPDSRRHIVSAWNVAELSKMALPPCHAFFQFYVADGKLSCQLYQRSADMFLGVPFN 121

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           IASY+LL +M+A  +G + GEFI T GD H+Y++H  Q + QLSR P   P + IN    
Sbjct: 122 IASYALLALMVAQQVGLEPGEFIWTGGDTHIYDDHLAQVEEQLSREPFPYPSLRINRKPT 181

Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +  + +EDF + +Y+ HA I A ++V
Sbjct: 182 SIFDYNFEDFEVLNYQHHATIKAPIAV 208


>gi|299779177|ref|YP_003734371.1| dTMP thymidylate synthase [Enterobacteria phage IME08]
 gi|298105906|gb|ADI55550.1| dTMP thymidylate synthase [Enterobacteria phage IME08]
          Length = 289

 Score =  310 bits (795), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 128/292 (43%), Positives = 172/292 (58%), Gaps = 33/292 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L++ +++ G +  DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL
Sbjct: 3   MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 62

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G +IWDE  +         DGELGP+YG QWR +    
Sbjct: 63  WFLSGSTNVNDLRERTHGSRTEGKTIWDENYENQAISLGYSDGELGPVYGKQWRDF---- 118

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              IDQ+  IV+ ++  P  RR IVSAWN A I+KMALPPCHC +QF V NG L  Q YQ
Sbjct: 119 -GGIDQVVEIVERIKKMPNDRRQIVSAWNPAEINKMALPPCHCFYQFNVRNGHLDLQWYQ 177

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ + + G+ H+Y+NH EQ    L R P+
Sbjct: 178 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 237

Query: 226 TLPQMIINPNIVDLLSFR-------------YEDFTLRSYEPHAAILAKVSV 264
            L ++ I     D   +               EDF L+ YE H  I AK++V
Sbjct: 238 ELCELEIRYWHKDFHEWTTEQQLAWVTGMMYPEDFVLKGYESHPTIKAKMAV 289


>gi|14599970|gb|AAK71184.1|AF358966_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi
           marinkellei]
 gi|14599972|gb|AAK71185.1|AF358967_1 dihydrofolate reductase-thymidylate synthetase [Trypanosoma cruzi
           marinkellei]
          Length = 491

 Score =  310 bits (794), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 165/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 228 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 287

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 288 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGADYTHH 347

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 348 DANYDGQGVDQIKTIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 407

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E    QL
Sbjct: 408 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCKEQL 467

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++ +     L  + 
Sbjct: 468 KRVPRAFPYLVFHREREFLEDYE 490


>gi|296818039|ref|XP_002849356.1| thymidylate synthase [Arthroderma otae CBS 113480]
 gi|238839809|gb|EEQ29471.1| thymidylate synthase [Arthroderma otae CBS 113480]
          Length = 349

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 130/310 (41%), Positives = 171/310 (55%), Gaps = 47/310 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 40  HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFALSKPSSDPSNPDPIPVLPLLTTK 99

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG 
Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159

Query: 97  QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ +V+ L+  PY RR I+SAWN A + KMALPPCH 
Sbjct: 160 QWRHFGAEYVDAKTDYAGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219

Query: 149 LFQFYVD-----------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
             QFYV             G LSC LYQRS D+ LG+PFNIASY+LLT M A       G
Sbjct: 220 FAQFYVSFPPQQEGDKKGKGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPG 279

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFTLRSYEP 254
             IHT+GD H+Y +H E    QL+R P   P + I   +    ++  ++  DF +  Y+P
Sbjct: 280 TLIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKIHRTDRGSGEMDGWKDSDFEVLDYKP 339

Query: 255 HAAILAKVSV 264
           H  I  K+SV
Sbjct: 340 HKLIKMKMSV 349


>gi|86137413|ref|ZP_01055990.1| Thymidylate synthase [Roseobacter sp. MED193]
 gi|85825748|gb|EAQ45946.1| Thymidylate synthase [Roseobacter sp. MED193]
          Length = 298

 Score =  309 bits (793), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 129/293 (44%), Positives = 172/293 (58%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
           +QYLDL+  V++ G +R DRTGVGTRS FG  +RFDLS G  P+ TTK+V+WK+ V E+L
Sbjct: 6   YQYLDLMERVLEQGDERIDRTGVGTRSLFGAMVRFDLSDGTAPIFTTKRVYWKTAVKEML 65

Query: 61  WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92
           WFL G +N+  L +  V IW                            D +A + GELGP
Sbjct: 66  WFLTGQTNIQSLLKDNVRIWTDWPLATYRRETGEDVSQEEFEQRVVNDDAFAARWGELGP 125

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W   DG   DQI+ +V++LR  P SRR +   WNVA + +MALPPCH ++Q+
Sbjct: 126 VYGKQWRRWMGADGREHDQIAGLVRALRETPASRRMLFHGWNVAELGEMALPPCHMVYQY 185

Query: 153 YV-DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           +V  +G+L+C L+QRS D+ LG PFN    S L +MLA       GE +   GDVHLY N
Sbjct: 186 HVTSDGRLNCLLFQRSVDLLLGKPFNCVGASALLLMLAQQADLVPGELVWVGGDVHLYLN 245

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           HFEQA  Q+ R PR  P+M +      +  +   DF +  Y PH  I A+V+V
Sbjct: 246 HFEQAREQIKRQPRPFPKMSLLKRAASIDDYEIGDFQVDGYAPHPPISAEVAV 298


>gi|61207193|gb|AAX40327.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  309 bits (792), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 122/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QW  +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWHHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|163737393|ref|ZP_02144810.1| Thymidylate synthase [Phaeobacter gallaeciensis BS107]
 gi|161388919|gb|EDQ13271.1| Thymidylate synthase [Phaeobacter gallaeciensis BS107]
          Length = 246

 Score =  308 bits (790), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 128/246 (52%), Positives = 172/246 (69%), Gaps = 13/246 (5%)

Query: 32  YQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELG 91
            Q R+ L+ GFPL+TTKK+H +S++HELLWFL GD+N+ YL  +GVSIWDEWAD++G+LG
Sbjct: 1   MQTRYPLADGFPLVTTKKLHLRSIIHELLWFLSGDTNIGYLKDNGVSIWDEWADENGDLG 60

Query: 92  PIYGVQWRSWPD-------------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           P+YG QWR +P              Y    +DQI+++V  +R  P SRR IV+AWN   +
Sbjct: 61  PVYGHQWRHFPRLELAEGTTGEEPLYRAGTVDQIANLVDMIRNSPDSRRLIVTAWNPGDV 120

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
             MALPPCH L+Q  V   ++  QLYQRS D+FLG+PFNIASY+LL  MLA V G++ G+
Sbjct: 121 PDMALPPCHTLWQVRVQGRRMHLQLYQRSADMFLGVPFNIASYALLLKMLAHVTGYEAGD 180

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           FIHT+GD H+Y+NH +Q  LQLSR P+ LP++ IN ++  +  FRYEDF + +Y P   I
Sbjct: 181 FIHTIGDAHIYSNHMDQVKLQLSRRPQPLPELRINRDVSSIFEFRYEDFDVLNYTPDPGI 240

Query: 259 LAKVSV 264
            A V+V
Sbjct: 241 KAPVAV 246


>gi|326475782|gb|EGD99791.1| thymidylate synthase [Trichophyton tonsurans CBS 112818]
          Length = 351

 Score =  308 bits (790), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 131/312 (41%), Positives = 172/312 (55%), Gaps = 49/312 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK------------GFPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 40  HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPLLPLLTTK 99

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+YG 
Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDGNGSREFLDSVGLSHREVGDLGPVYGF 159

Query: 97  QWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ +V+ L+  PY RR I+SAWN A + KMALPPCH 
Sbjct: 160 QWRHFGAEYVDAKTDYTGKGVDQVAEVVRKLKESPYDRRIILSAWNPADLKKMALPPCHM 219

Query: 149 LFQFYVD-------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
             QFYV               G LSC LYQRS D+ LG+PFNIASY+LLT M A      
Sbjct: 220 FAQFYVSFPPQKAGDEGKKGKGILSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLH 279

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSY 252
            G FIHT+GD H+Y +H E    QL+R P   P + IN       ++  ++  DF +  Y
Sbjct: 280 PGTFIHTMGDAHVYLDHIEALQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDY 339

Query: 253 EPHAAILAKVSV 264
           +PH  I  K+S+
Sbjct: 340 KPHKLIKMKMSI 351


>gi|320103743|ref|YP_004179334.1| thymidylate synthase [Isosphaera pallida ATCC 43644]
 gi|319751025|gb|ADV62785.1| thymidylate synthase [Isosphaera pallida ATCC 43644]
          Length = 285

 Score =  308 bits (790), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 151/274 (55%), Positives = 189/274 (68%), Gaps = 13/274 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVG-----TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
           YLDLLR V+  G  +  R  VG       S FG Q+R+DLS  FPL TTK+V + SVVHE
Sbjct: 12  YLDLLRDVLHHGRRQPTRAKVGGEFIDALSVFGRQVRYDLSDRFPLFTTKRVSFHSVVHE 71

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ- 117
           LLWFLRG++NV  L   GV+IWDEWAD+ GELGPIYG QWR+W   DG V DQI +I+  
Sbjct: 72  LLWFLRGETNVRSLQAAGVTIWDEWADEAGELGPIYGRQWRAWNGPDGRVFDQIQAILDG 131

Query: 118 --SLRADPY---SRRHIVSAWNVALIDKMALPPCHCLFQFYVDN-GKLSCQLYQRSGDVF 171
              LR DP     RR I++AWNVA ++KMALPPCHCL QF++D+ G+LSCQLYQRS D+F
Sbjct: 132 LTQLRQDPRASVGRRLILNAWNVADLEKMALPPCHCLAQFHLDDAGRLSCQLYQRSADLF 191

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFN+ASY+LLT ++A V G + GEFIHTLGD H+Y NH +Q   QL R PR LP++ 
Sbjct: 192 LGVPFNVASYALLTRLIAHVQGLEPGEFIHTLGDAHIYVNHLDQVRRQLERDPRPLPRVT 251

Query: 232 INPNIV-DLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  ++   L   R E   L  Y PH A+  +V+V
Sbjct: 252 LAEDLDPTLKKVRREQIVLEGYHPHPALPGEVAV 285


>gi|238695380|ref|YP_002922573.1| dTMP (thymidylate) synthase [Enterobacteria phage JS10]
 gi|220029516|gb|ACL78450.1| dTMP (thymidylate) synthase [Enterobacteria phage JS10]
          Length = 285

 Score =  308 bits (790), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 123/290 (42%), Positives = 171/290 (58%), Gaps = 31/290 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L++ +++ G +  DRTG GT + FG ++RFDL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRFDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G +IWDE  +          GELGP+YG QWR +    
Sbjct: 61  WFLSGSTNVNDLRFRTHGSLIDGKTIWDENYENQAKDLGYHSGELGPVYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ+  I+  ++  P  RR IVSAWN A I++MALPPCHC +QF V NG L  Q YQ
Sbjct: 117 -GGVDQVVEIINRIKKMPNDRRQIVSAWNPAEINQMALPPCHCFYQFNVRNGHLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ + + G+ H+Y+NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCQEVLRREPK 235

Query: 226 TLPQMII-----------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L ++ I              +  + S +  DF L+ YE H  I AK++V
Sbjct: 236 DLCELEIDLPEEFILWDTKTQLSWIDSMKPSDFVLKGYESHPTIKAKMAV 285


>gi|119179951|ref|XP_001241483.1| conserved hypothetical protein [Coccidioides immitis RS]
 gi|303321055|ref|XP_003070522.1| thymidylate synthase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110218|gb|EER28377.1| thymidylate synthase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320036037|gb|EFW17977.1| thymidylate synthase [Coccidioides posadasii str. Silveira]
          Length = 357

 Score =  308 bits (790), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 131/319 (41%), Positives = 172/319 (53%), Gaps = 56/319 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-----------GFPLLTTKK 49
           HQYL+L+R ++  G  R DRTG GT + F   Q+RF LSK             PLLTTK+
Sbjct: 39  HQYLNLIRTILATGEHRPDRTGTGTCAIFAPPQLRFSLSKPGPTPSSTPIPILPLLTTKR 98

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+YG Q
Sbjct: 99  VFLRAVILELLWFISGCTSSLTLSEAGVKIWDGNGSREFLDSVGLSHREVGDLGPVYGFQ 158

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPCH  
Sbjct: 159 WRHFGAEYVDAKADYSGKGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPCHMF 218

Query: 150 FQFYVD---------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
            QFYV                       G L+C LYQRS D+ LG+PFNIASY+LLT ML
Sbjct: 219 AQFYVSFCNAALPEMENGTNEDADKKQKGTLNCLLYQRSCDMGLGVPFNIASYALLTHML 278

Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---DLLSFRYE 245
           A       G  IHT+GD H+Y +H      QL+R P T P++ IN       D+  +   
Sbjct: 279 AHAADLYPGTLIHTMGDAHVYLDHIAALQEQLTREPTTFPELRINRTDRGSGDMDGWAEG 338

Query: 246 DFTLRSYEPHAAILAKVSV 264
           DF +  Y+PH  I  K+SV
Sbjct: 339 DFEVIGYKPHKMIKMKMSV 357


>gi|61207187|gb|AAX40324.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  308 bits (790), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 122/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  + + G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRITREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|225681301|gb|EEH19585.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Paracoccidioides brasiliensis Pb03]
          Length = 360

 Score =  308 bits (790), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 130/313 (41%), Positives = 175/313 (55%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFD-----------LSKGFPLLTTKK 49
           HQYL+L+R ++  G +R DRTG GTRS F   Q+RF             +   PLLTTK+
Sbjct: 48  HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGSSSPSSRTPILPLLTTKR 107

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L + G+ IWD    ++            G+LGP+YG Q
Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSKAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH  
Sbjct: 168 WRHFGAEYIDAQTDYTGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227

Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
            QFYV                 G LSCQLYQRS D+ LG+PFNIASY+LLT MLA     
Sbjct: 228 AQFYVSFPSHGGNTESGHEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRS 251
             G  IHT+GD H+Y +H E    QL R P   P+++I  +      +  ++ E+F +  
Sbjct: 288 YPGTLIHTMGDAHVYLDHIESLQEQLKREPVDFPELVIKRDDRGSGVMDGWKEEEFEVVG 347

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I  K+SV
Sbjct: 348 YKPHKGIKMKMSV 360


>gi|156049499|ref|XP_001590716.1| hypothetical protein SS1G_08456 [Sclerotinia sclerotiorum 1980]
 gi|154692855|gb|EDN92593.1| hypothetical protein SS1G_08456 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 354

 Score =  308 bits (790), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 126/312 (40%), Positives = 172/312 (55%), Gaps = 49/312 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLS-----KGFPLLTTKKVHWKSV 55
           +QYLDL+R +++ G  R DRTG GT S F    ++F L+        PLLTTK+V  ++V
Sbjct: 43  YQYLDLIREILETGEHRPDRTGTGTISLFAPAPLKFSLTSPTGTPILPLLTTKRVFLRAV 102

Query: 56  VHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP- 102
           + ELLWF+ G ++   L   G+ IWD    +            +G+LGP+YG QWR +  
Sbjct: 103 LTELLWFISGSTSSLPLSAAGIKIWDGNGSRTYLDSIGLSHRAEGDLGPVYGFQWRHFGA 162

Query: 103 -------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD 155
                  DY G  +DQ++ IV  L+ +P+ RR I+SAWNVA I  MALPPCH   QFYV 
Sbjct: 163 KYIDAETDYTGQGVDQLAEIVWKLKNNPWDRRIILSAWNVADIKLMALPPCHMFAQFYVS 222

Query: 156 NGK--------------------LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
             K                    L CQLYQRS D+ LG+PFNIASY+LLT +LA      
Sbjct: 223 FPKTPDSSTSEANTNPESKPKGILHCQLYQRSCDMGLGVPFNIASYALLTHILAHACNLT 282

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSY 252
            G F HT+GD H+Y +H +   +QL R PR  P++ I         +  ++ E+F +R Y
Sbjct: 283 PGTFTHTMGDAHVYVDHVDALKIQLEREPREFPELGILREDRGSGVVDGWKGEEFEVRGY 342

Query: 253 EPHAAILAKVSV 264
           +PH  I  K+SV
Sbjct: 343 KPHGKIDMKMSV 354


>gi|61207217|gb|AAX40339.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  308 bits (789), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 122/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S F  QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFDAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|61207199|gb|AAX40330.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 493

 Score =  308 bits (789), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 122/263 (46%), Positives = 164/263 (62%), Gaps = 21/263 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMR  L     PLLTTK+V W+ V  ELL
Sbjct: 229 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRSSLRNNRLPLLTTKRVFWRGVCEELL 288

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 289 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 348

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 349 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 408

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 409 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 468

Query: 221 SRSPRTLPQMIINPNIVDLLSFR 243
            R PR  P ++       L  + 
Sbjct: 469 KRVPRAFPYLVFRREREFLEDYE 491


>gi|163740938|ref|ZP_02148331.1| thymidylate synthase [Phaeobacter gallaeciensis 2.10]
 gi|161385929|gb|EDQ10305.1| thymidylate synthase [Phaeobacter gallaeciensis 2.10]
          Length = 246

 Score =  308 bits (789), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 129/246 (52%), Positives = 174/246 (70%), Gaps = 13/246 (5%)

Query: 32  YQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELG 91
            Q R+ L+ GFPL+TTKK+H +S++HELLWFL GD+N+ YL  +GVSIWDEWAD++G+LG
Sbjct: 1   MQTRYPLADGFPLVTTKKLHLRSIIHELLWFLSGDTNIGYLKDNGVSIWDEWADENGDLG 60

Query: 92  PIYGVQWRSWPD-------------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           P+YG QWR +P              Y    +DQI+++V+ +R  P SRR IV+AWN A +
Sbjct: 61  PVYGHQWRHFPRLELAPGTSGDEPLYRAGTVDQITNLVEMIRNSPDSRRLIVTAWNPADV 120

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
             MALPPCH L+Q  V   ++  QLYQRS D+FLG+PFNIASY+LL  MLA V G++ G+
Sbjct: 121 PDMALPPCHTLWQVRVQGRRMHLQLYQRSADMFLGVPFNIASYALLLKMLAHVTGYEAGD 180

Query: 199 FIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAI 258
           FIHT+GD H+Y+NH +Q  LQLSR P+ LP++ IN ++  +  FRYEDF + +Y P   I
Sbjct: 181 FIHTIGDAHIYSNHMDQVKLQLSRRPQPLPELRINRDVSSIFEFRYEDFDVLNYTPDPGI 240

Query: 259 LAKVSV 264
            A V+V
Sbjct: 241 KAPVAV 246


>gi|51894252|ref|YP_076943.1| thymidylate synthase [Symbiobacterium thermophilum IAM 14863]
 gi|62901280|sp|Q67JQ1|TYSY_SYMTH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|51857941|dbj|BAD42099.1| thymidylate synthase [Symbiobacterium thermophilum IAM 14863]
          Length = 283

 Score =  308 bits (789), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 125/277 (45%), Positives = 174/277 (62%), Gaps = 16/277 (5%)

Query: 3   QYLDLLRHVIKF-------GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSV 55
           QYL+L R ++         G    +RTG+GT   FG  ++ D  +GFP LTTKK+ + SV
Sbjct: 6   QYLELCREILAENEQEIAEGRWTPNRTGMGTVGVFGRMLKHDFKEGFPALTTKKLFFNSV 65

Query: 56  VHELLWFLRGDSNVSYLHRHGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISS 114
             ELLWFL G +++ +LH  G  IWD+ A ++G +LGPIYG QWR+W   DG   DQI+ 
Sbjct: 66  KAELLWFLAGRTDLEFLHERGCHIWDKDAARNGGKLGPIYGKQWRAWEGADGRTYDQIAW 125

Query: 115 IVQSLRA--------DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           ++Q +R          P SRR +VS WNVA +++MALPPCH  FQF+V +G+L   ++QR
Sbjct: 126 VIQQIREIAADPERPHPNSRRLVVSPWNVADLEEMALPPCHGPFQFHVKDGRLHLAVWQR 185

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S D+FLG+PFNIASYSLL  M+A V G   G + H L DVH+Y N  +Q  LQL+R P  
Sbjct: 186 SADLFLGVPFNIASYSLLLHMVAQVTGLAVGTYTHYLNDVHIYRNLLDQVRLQLTREPYP 245

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           LP++ +NP + ++  F  +D  L  Y+ H  I  ++S
Sbjct: 246 LPRLWLNPEVREIDQFTMDDIQLVDYKHHPPIRGELS 282


>gi|194246714|ref|YP_002004353.1| thymidylate synthase [Candidatus Phytoplasma mali]
 gi|254790246|sp|B3QZX0|TYSY_PHYMT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|193807071|emb|CAP18507.1| Thymidylate synthase [Candidatus Phytoplasma mali]
          Length = 288

 Score =  307 bits (788), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 137/293 (46%), Positives = 192/293 (65%), Gaps = 34/293 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL+L R ++ +G  + DRT  GTRS FGYQMRF+L KGFPLLTTKK+++K+++HELL
Sbjct: 1   MQAYLNLCRDILNYGKKKIDRTKTGTRSIFGYQMRFNLEKGFPLLTTKKMNFKAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK-----------------------------DGELG 91
           WF++GD+N+ YL ++ V+IW+EW  +                              G+LG
Sbjct: 61  WFIKGDTNIRYLVQNNVNIWNEWPYQKYCNSNFFQNLTLQEFIDKIIIDEKFAKIHGDLG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           PIYG QWR++       IDQ++ ++  ++ +P+SRR I++AW+  +I  M LPPCH + Q
Sbjct: 121 PIYGHQWRNF-----QGIDQLTDLISEIKKNPHSRRLILTAWDPTVIKDMLLPPCHVMIQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
            YV+  K+S QLYQRSGDVFLGIPFNIASYSLL +++A   G +  EFIHT+GD H+YNN
Sbjct: 176 CYVEKNKISMQLYQRSGDVFLGIPFNIASYSLLLIIIAQCTGLKPFEFIHTIGDAHIYNN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H EQ   Q+ R P+ LP M +NP+I+D+  F + DF L  YE +  +   V+V
Sbjct: 236 HIEQIQKQIKRIPKKLPIMTLNPHIIDINQFTFNDFNLEKYESYGILKGVVAV 288


>gi|255936107|ref|XP_002559080.1| Pc13g06460 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583700|emb|CAP91715.1| Pc13g06460 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 336

 Score =  307 bits (788), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 125/313 (39%), Positives = 172/313 (54%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK----------GFPLLTTKKV 50
           HQYL+L+R ++  G  R DRTG GT+S F   Q+RF LSK            PLLTTK+V
Sbjct: 24  HQYLNLIRTILSEGEHRPDRTGTGTQSIFAPPQLRFSLSKPNPEGGEPIPILPLLTTKRV 83

Query: 51  HWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQW 98
             ++V+ ELLWF+ G ++   L   G+ IWD                ++G+LGP+YG QW
Sbjct: 84  FLRAVLAELLWFISGCTSSLPLSEAGIKIWDGNGSREFLDKSGLGHREEGDLGPVYGFQW 143

Query: 99  RSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150
           R +         DY G  +DQ+  +V  L  +P+ RR I+SAWN A + KMALPPCH   
Sbjct: 144 RHFGAEYVDAKTDYSGQGVDQLKDVVHKLIHNPFDRRIIMSAWNPADLKKMALPPCHMFA 203

Query: 151 QFYV----------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
           QFYV                + G LSC LYQRS D+ LG+PFNIASY+LLT +LA     
Sbjct: 204 QFYVSFPPGMKLDEKTGRPSEKGTLSCVLYQRSCDMGLGVPFNIASYALLTHILAHAADL 263

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRS 251
             G  IHT+GD H+Y +H +  + QL R P   P++ I  +      +  ++ ++F +  
Sbjct: 264 HPGTLIHTMGDAHVYLDHIDALNEQLVREPTEFPELRIKRDDRGAAVVDGWKEDEFEVIG 323

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I  K+SV
Sbjct: 324 YKPHKIIKMKMSV 336


>gi|109290183|ref|YP_656432.1| thymidylate synthetase [Aeromonas phage 25]
 gi|104345856|gb|ABF72756.1| thymidylate synthetase [Aeromonas phage 25]
          Length = 279

 Score =  307 bits (787), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 167/282 (59%), Gaps = 21/282 (7%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+  +I  G  + DRTGVGTRS FG  +RFDLSKGFP  T K++ +  VV ELL
Sbjct: 1   MIQYTDLVCDIITNGRKKTDRTGVGTRSVFGRMLRFDLSKGFPATTRKRLAFVPVVGELL 60

Query: 61  WFLRGDSNVSYLHRHG-------VSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WF++G +NV +L +          +IWD+  +K        DG LGP+YG QWR + + +
Sbjct: 61  WFMQGSTNVEHLRKLTYGENSDRKTIWDDNYNKQAVDLGYSDGYLGPVYGKQWRMFGNKN 120

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ+ +++  ++A+P SRR +V AWN   I+KMALPPCH  FQF V  GKLS    Q
Sbjct: 121 --PVDQLQNVIDQIKANPDSRRLLVVAWNPEDIEKMALPPCHYAFQFEVYEGKLSLMWSQ 178

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DV LG+PFNIASY+LL  ++A +   + GE + +  DVH+Y NH       LSR  R
Sbjct: 179 RSVDVGLGLPFNIASYALLVHIVARICNLEVGELVFSGADVHIYENHLSHLGGMLSREER 238

Query: 226 TLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264
            LP +   P+I  L         DF L  Y+PH  I   ++V
Sbjct: 239 PLPTLSF-PDIGSLSDLRLLEAADFRLDGYDPHPTIKLPMAV 279


>gi|302852458|ref|XP_002957749.1| hypothetical protein VOLCADRAFT_68527 [Volvox carteri f.
           nagariensis]
 gi|300256925|gb|EFJ41181.1| hypothetical protein VOLCADRAFT_68527 [Volvox carteri f.
           nagariensis]
          Length = 294

 Score =  307 bits (786), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 127/290 (43%), Positives = 169/290 (58%), Gaps = 27/290 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             YLDLLRHV++ G  R DRTG GT S FG Q+RFD+S   P+LTTKKV W+ V+ ELLW
Sbjct: 5   QAYLDLLRHVLECGEPREDRTGTGTLSVFGRQLRFDISDCVPVLTTKKVAWQKVIQELLW 64

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDY----- 104
           F+RGD++ + L R GV +WD  + +            +G++G  YG QWR +        
Sbjct: 65  FMRGDTDAAILQRDGVRVWDGNSSRAFLDARGLRHLPEGDIGAGYGHQWRRFGSPYVDCK 124

Query: 105 -------DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN- 156
                  +   +DQ+  ++  LR +P SRR  +SAWN   +DKMALPPCH   QFY D  
Sbjct: 125 TPPRQGAEAGGVDQLQFVLDELRRNPSSRRIFMSAWNPCDLDKMALPPCHVSAQFYADRA 184

Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           G LSC +YQRS DVFLG P+NI SYS+LT +LA+  G +  E I + GD H+Y NH  Q 
Sbjct: 185 GGLSCHMYQRSVDVFLGFPWNILSYSVLTYILAAKAGLKPKELIISTGDTHIYANHVGQV 244

Query: 217 DLQLSRSPRTLPQMIINPNI--VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             QL+R P   P++ ++P +          EDF +  Y  H  I A +SV
Sbjct: 245 RTQLARQPFAWPRLELSPAVAAKAFEDITLEDFRMVGYTSHPYIRADMSV 294


>gi|226288197|gb|EEH43710.1| thymidylate synthase [Paracoccidioides brasiliensis Pb18]
          Length = 360

 Score =  307 bits (786), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 130/313 (41%), Positives = 175/313 (55%), Gaps = 50/313 (15%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFD-----------LSKGFPLLTTKK 49
           HQYL+L+R ++  G +R DRTG GTRS F   Q+RF             +   PLLTTK+
Sbjct: 48  HQYLNLIRSILATGENRSDRTGTGTRSLFAPPQLRFSLSKPGSSSPSSRTPILPLLTTKR 107

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQ 97
           V  ++V+ ELLWF+ G ++   L + G+ IWD    ++            G+LGP+YG Q
Sbjct: 108 VFLRAVLGELLWFISGCTSSLPLSKAGIKIWDGNGSREYLDSVGLSHRAVGDLGPVYGFQ 167

Query: 98  WRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           WR +         DY G  +DQI+ +V+ LR +PY RR I+SAWN A + KMALPPCH  
Sbjct: 168 WRHFGAEYIDAQTDYMGQGVDQIAEVVRKLRENPYDRRIILSAWNPADLKKMALPPCHMF 227

Query: 150 FQFYVD---------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
            QFYV                 G LSCQLYQRS D+ LG+PFNIASY+LLT MLA     
Sbjct: 228 AQFYVSFPSHGGNTESGHEKGKGTLSCQLYQRSCDMGLGVPFNIASYALLTHMLAHAADL 287

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRS 251
             G  IHT+GD H+Y +H E    QL R P   P+++I  +      +  ++ E+F +  
Sbjct: 288 YPGTLIHTMGDAHVYLDHIEALQEQLKREPVDFPELVIKRDDRGSGVMDGWKEEEFEVVG 347

Query: 252 YEPHAAILAKVSV 264
           Y+PH  I  K+SV
Sbjct: 348 YKPHKGIKMKMSV 360


>gi|227822598|ref|YP_002826570.1| thymidylate synthase [Sinorhizobium fredii NGR234]
 gi|254790247|sp|C3MEE8|TYSY_RHISN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|227341599|gb|ACP25817.1| thymidylate synthase [Sinorhizobium fredii NGR234]
          Length = 305

 Score =  307 bits (786), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 126/299 (42%), Positives = 172/299 (57%), Gaps = 36/299 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYLDL+  +++ G  R DRTG GT S FG QMRF LS G  P+ TTKKV+WK+ V E+L
Sbjct: 7   YQYLDLMSELLETGDRRMDRTGEGTLSLFGKQMRFKLSDGTIPIFTTKKVYWKTSVKEML 66

Query: 61  WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92
           WFL G +N+S L R  V IW                            DE+A + G+LGP
Sbjct: 67  WFLTGQTNISSLLRENVRIWTDWPLAKYRKATGETISQEQFEDRIVASDEFASEWGDLGP 126

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR W D DG   DQI++++ +L+ +P SRR +  AWNV  +D+MAL PCH  +QF
Sbjct: 127 VYGKQWRRWVDNDGQEHDQIATVISTLKTNPTSRRILFHAWNVGELDRMALHPCHMTYQF 186

Query: 153 YVD-------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           +V          +LS  ++QRS D+FLG PFNI   ++L  M+A  +    GE +   GD
Sbjct: 187 HVSWPNGQDGRPQLSMMVHQRSCDIFLGAPFNICQQAVLLAMIAQQVDMDRGELVWLGGD 246

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            HLY NH +QA LQLSR P+  P++ I      +  +  +DF +  Y+ H  I A V+V
Sbjct: 247 THLYLNHLDQARLQLSRKPKPFPKLEIKRRPASIDGYTIDDFEVSEYQSHERIEAPVAV 305


>gi|164659149|ref|XP_001730699.1| hypothetical protein MGL_2153 [Malassezia globosa CBS 7966]
 gi|159104596|gb|EDP43485.1| hypothetical protein MGL_2153 [Malassezia globosa CBS 7966]
          Length = 535

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 120/297 (40%), Positives = 168/297 (56%), Gaps = 34/297 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ--MRFDLSKG-FPLLTTKKVHWKSVVHE 58
           +QYL+L+  +I+ G  R DRTG GT + F     ++FDLS G  PLLTTK+V ++ V+ E
Sbjct: 239 YQYLNLVSSIIRHGEIRADRTGTGTIAQFAPTRTLKFDLSGGKLPLLTTKRVFFRGVLEE 298

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP---- 102
           LLWF+ G ++   L    V IWD                ++G+LGPIYG QWR +     
Sbjct: 299 LLWFIAGCTDAKRLSERDVHIWDGNGSLEFLQRRGLSHRREGDLGPIYGFQWRHFGAKYI 358

Query: 103 ----DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--- 155
               DY G  +DQ++ ++  +R +P  RR ++ AWN A +D MALPPCH L QF+V    
Sbjct: 359 DADTDYTGQGVDQLAQVIHQIRHNPADRRILLCAWNPADLDSMALPPCHILCQFFVSMPT 418

Query: 156 --------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVH 207
                     +L CQ+YQRS D+ LG+PFNIASYSLLT  +A+V   +  EF   +GD H
Sbjct: 419 TDAMSKGQRPRLKCQMYQRSCDLGLGVPFNIASYSLLTHFIAAVTDCEAAEFTLVMGDAH 478

Query: 208 LYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +Y +H      QL R+PR  P + I  N+  +   R +D  L +Y PH  I  ++SV
Sbjct: 479 VYLDHVHPLQEQLRRTPRAFPTVHIRRNVTSIDEIRPDDVQLLNYSPHGKINMQMSV 535


>gi|328771286|gb|EGF81326.1| hypothetical protein BATDEDRAFT_10605 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 333

 Score =  306 bits (784), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 135/311 (43%), Positives = 173/311 (55%), Gaps = 49/311 (15%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
           QYLDL+R +I  G  R+DRTG GT S F   Q+RF L+    PLLTTK+   + V  EL+
Sbjct: 23  QYLDLVRQIIGTGDLRKDRTGTGTLSLFAPPQLRFSLADNTLPLLTTKRTFLRPVFEELM 82

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+RG ++   L   GV IWD    ++            G+LGPIYG QWR +       
Sbjct: 83  WFIRGQTDSKILAGKGVHIWDANGSREALDRAGLGHRQEGDLGPIYGFQWRHFGASYENA 142

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG--- 157
             DY G  IDQ+  +++ L ++P  RR I+SAWN   I  MALPPCH L Q YV      
Sbjct: 143 DTDYTGKGIDQLEKVIEQLVSNPTDRRIILSAWNPLAIPDMALPPCHILAQLYVSTPSET 202

Query: 158 ----KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
               +LSCQLYQRS D+ LG+PFNIASYSLLT+MLA V GF+ GEFIH LGD H+Y NH 
Sbjct: 203 HPVPRLSCQLYQRSCDMGLGVPFNIASYSLLTIMLAHVCGFEPGEFIHCLGDTHVYCNHI 262

Query: 214 EQADLQLSRSPRTLPQMIINPN--------------------IVDLLSFRYEDFTLRSYE 253
           +    QL R+PR  P++ I  N                    + ++ +F YE   +  Y 
Sbjct: 263 DALQTQLERTPRPFPKIFIKRNDTGTQSSDTVESTAQKVARLVREMETFEYEHIDVVGYT 322

Query: 254 PHAAILAKVSV 264
           PH  I   +SV
Sbjct: 323 PHNKIAMDMSV 333


>gi|156345471|ref|XP_001621374.1| hypothetical protein NEMVEDRAFT_v1g145132 [Nematostella vectensis]
 gi|156207232|gb|EDO29274.1| predicted protein [Nematostella vectensis]
          Length = 210

 Score =  306 bits (784), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 120/210 (57%), Positives = 152/210 (72%)

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
           ++ ELLWFLRGDSNV +L   G +IW+EWA +DG+LGP+YGVQWR+WP  DG  IDQI+ 
Sbjct: 1   IILELLWFLRGDSNVRWLQERGCTIWNEWAREDGDLGPVYGVQWRNWPTPDGGHIDQIAE 60

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
           +V+ L+++P SRR IVSAWNVA + +MAL PCH  FQFYV +GKLSCQLYQRS D+FLG+
Sbjct: 61  VVKQLKSNPDSRRIIVSAWNVADLPQMALMPCHAFFQFYVADGKLSCQLYQRSADIFLGV 120

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           PFNIASY+LLT MLA     Q G+F+ T GD H+YNNHF Q + QL+R P   P + I  
Sbjct: 121 PFNIASYALLTHMLAQQCDLQVGDFVWTGGDCHIYNNHFAQVETQLARQPFAYPTLQIKR 180

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               +  + YEDF +  Y+ H  I A V+V
Sbjct: 181 RPDSIFGYEYEDFEVVGYQHHEPIKAPVAV 210


>gi|145248694|ref|XP_001400686.1| thymidylate synthase [Aspergillus niger CBS 513.88]
 gi|134081354|emb|CAK41856.1| unnamed protein product [Aspergillus niger]
          Length = 356

 Score =  306 bits (783), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 125/319 (39%), Positives = 171/319 (53%), Gaps = 56/319 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK--------------GFPLLT 46
           HQYL+L+R ++  G  R DRTG GTRS F   QMRF LSK                PLLT
Sbjct: 38  HQYLNLIRRILSEGEHRPDRTGTGTRSIFAPPQMRFSLSKPSTNTTTGIKEYTPILPLLT 97

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   G+ IWD    ++            G+LGP+Y
Sbjct: 98  TKRVFLRAVLAELLWFISGTTSSLPLSEAGIKIWDGNGSREYLDKVGLSHREVGDLGPVY 157

Query: 95  GVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           G QWR +         DY G  +DQ++ +V+ L+ +P+ RR I+SAWN   +  MALPPC
Sbjct: 158 GFQWRHFGAEYVDAKTDYSGQGVDQLAEVVKKLKENPFDRRIIMSAWNPKDMRIMALPPC 217

Query: 147 HCLFQFYVD------------------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
           H   QFYV                    G L C LYQRS D+ LG+PFNIASY+LLT +L
Sbjct: 218 HMFAQFYVRFPDAKRDEEGVVRDGEWGRGHLDCLLYQRSADMGLGVPFNIASYALLTHLL 277

Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYE 245
           A  +    G  +HTLGD H+Y +H +    Q+ R P   P++ I         +  ++ E
Sbjct: 278 AHAVDMVPGTLVHTLGDAHVYLDHVDALKEQIEREPVAFPEVRIKREDRGSGVVDGWKEE 337

Query: 246 DFTLRSYEPHAAILAKVSV 264
           +F +  Y+PH AI  K+SV
Sbjct: 338 EFEVIGYKPHKAIKMKMSV 356


>gi|322701545|gb|EFY93294.1| thymidylate synthase [Metarhizium acridum CQMa 102]
          Length = 335

 Score =  306 bits (783), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 119/315 (37%), Positives = 170/315 (53%), Gaps = 52/315 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56
           +QYLDL+R +++ G  R DRTG GT S F    ++F L++      PLLTTK+V  ++V+
Sbjct: 21  YQYLDLIREILEEGEQRFDRTGTGTISIFAPRPLKFSLNRDGAPILPLLTTKRVFLRAVI 80

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-- 102
            ELLWF+  +++   L   GV IWD                ++G+LGP+YG QWR +   
Sbjct: 81  AELLWFIEANTSSKALSDVGVKIWDGNGSREFLDNLGLTHREEGDLGPVYGFQWRHFGAE 140

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154
                 DY G  +DQ++ ++  L+  PY RR I+SAWN   +  MALPPCH   QFYV  
Sbjct: 141 YVDAKTDYTGQGVDQLADVIDKLKNKPYDRRIIMSAWNARDLHLMALPPCHVFAQFYVSY 200

Query: 155 ------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
                                   + G L CQLYQRS D+ LG+PFNIASY+LLT M+A 
Sbjct: 201 PSRRRRNGKPSSMETNGGPTSTAPEKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIAH 260

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTL 249
           V     G   H +GD H+Y +H +  ++QL R PR  P++ I       +  ++ ED  +
Sbjct: 261 VCDLVPGSLTHVMGDAHVYADHEDALNIQLEREPRQFPEVEIARERGCGIDGWKVEDIIV 320

Query: 250 RSYEPHAAILAKVSV 264
           + Y+PH  I  K++V
Sbjct: 321 KGYDPHKTIAMKMAV 335


>gi|2833319|sp|Q23695|DRTS_CRIFA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|162494|gb|AAA30318.1| dihydrofolate reductase-thymidylate synthetase [Crithidia
           fasciculata]
          Length = 515

 Score =  305 bits (782), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 118/284 (41%), Positives = 164/284 (57%), Gaps = 23/284 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+L+  ++K G  + DRTGVGT S FG QM        PLLTTK+V W+ V  EL+W
Sbjct: 234 RQYLELIDRIMKTGLVKEDRTGVGTISLFGAQMFSLRDNQLPLLTTKRVFWRGVCEELIW 293

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-DYDG-- 106
           FLRG++N   L    + IWD               +K+ +LGP+YG QWR +  DY G  
Sbjct: 294 FLRGETNAHVLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGFD 353

Query: 107 ----NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLS 160
                 +DQI +IV++L+ +   RR +V+AWN   + KMA+ PCH L QFYV+    +LS
Sbjct: 354 ANYDEGVDQIKTIVETLKTN--DRRLLVTAWNPCALHKMAVRPCHLLGQFYVNTQTKELS 411

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQR  D+ LG+PFNIASY+LLT+++A   G + GE +HTLG  H+Y+NH E    QL
Sbjct: 412 CMLYQRCCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGTAHVYSNHVEALKEQL 471

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R P   P ++       L  +   D  +  Y P+  I  +++V
Sbjct: 472 QRVPVAFPVLVFKKEREFLEDYESTDMEVVDYVPYPPIKMEMAV 515


>gi|284156866|gb|ADB79636.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 478

 Score =  305 bits (781), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 122/257 (47%), Positives = 163/257 (63%), Gaps = 21/257 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMIINPNIV 237
            R PR  P ++      
Sbjct: 461 KRVPRAFPYLVFRRERE 477


>gi|284156904|gb|ADB79655.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 477

 Score =  304 bits (780), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 122/257 (47%), Positives = 163/257 (63%), Gaps = 21/257 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMIINPNIV 237
            R PR  P ++      
Sbjct: 461 KRVPRAFPYLVFRRERE 477


>gi|284156914|gb|ADB79660.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 477

 Score =  304 bits (780), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 122/257 (47%), Positives = 163/257 (63%), Gaps = 21/257 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMIINPNIV 237
            R PR  P ++      
Sbjct: 461 KRVPRAFPYLVFRRERE 477


>gi|284156912|gb|ADB79659.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 364

 Score =  304 bits (780), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 122/258 (47%), Positives = 163/258 (63%), Gaps = 21/258 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 107 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 166

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 167 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 226

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 227 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 286

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 287 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 346

Query: 221 SRSPRTLPQMIINPNIVD 238
            R PR  P ++       
Sbjct: 347 KRVPRAFPYLVFRRERES 364


>gi|284156894|gb|ADB79650.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 477

 Score =  304 bits (780), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 122/257 (47%), Positives = 163/257 (63%), Gaps = 21/257 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMIINPNIV 237
            R PR  P ++      
Sbjct: 461 KRVPRAFPYLVFRRERE 477


>gi|284156874|gb|ADB79640.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156878|gb|ADB79642.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156880|gb|ADB79643.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156902|gb|ADB79654.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156906|gb|ADB79656.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156910|gb|ADB79658.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156922|gb|ADB79664.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 476

 Score =  304 bits (780), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 122/255 (47%), Positives = 163/255 (63%), Gaps = 21/255 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMIINPN 235
            R PR  P ++    
Sbjct: 461 KRVPRAFPYLVFRRE 475


>gi|284156876|gb|ADB79641.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156896|gb|ADB79651.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156898|gb|ADB79652.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 477

 Score =  304 bits (780), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 122/257 (47%), Positives = 163/257 (63%), Gaps = 21/257 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMIINPNIV 237
            R PR  P ++      
Sbjct: 461 KRVPRAFPYLVFRRERE 477


>gi|322705675|gb|EFY97259.1| thymidylate synthase [Metarhizium anisopliae ARSEF 23]
          Length = 335

 Score =  304 bits (779), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 118/315 (37%), Positives = 170/315 (53%), Gaps = 52/315 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG----FPLLTTKKVHWKSVV 56
           ++YLDL+R +++ G  R DRTG GT S F    ++F L++      PLLTTK+V  ++V+
Sbjct: 21  YRYLDLIREILEEGEQRPDRTGTGTISIFAPRPLKFSLNQDGTPILPLLTTKRVFLRAVI 80

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-- 102
            ELLWF+  +++   L   GV IWD                ++G+LGP+YG QWR +   
Sbjct: 81  AELLWFIEANTSSKALSDVGVKIWDGNGSREFLDNLGLTHREEGDLGPVYGFQWRHFGAE 140

Query: 103 ------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-- 154
                 DY G  +DQ++ ++  L+  PY RR I+SAWN   +  MALPPCH   QFYV  
Sbjct: 141 YVDAKTDYTGQGVDQLADVIDKLKNKPYDRRIIISAWNARDLHLMALPPCHVFAQFYVSY 200

Query: 155 ------------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
                                   + G L CQLYQRS D+ LG+PFNIASY+LLT M+A 
Sbjct: 201 PSRRRRNGMASSTETNGSATSTAPEKGHLHCQLYQRSCDMGLGVPFNIASYALLTHMIAH 260

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI-VDLLSFRYEDFTL 249
           V     G   H +GD H+Y +H +  ++QL R PR  P++ I       +  ++ ED  +
Sbjct: 261 VCDLVPGSLTHVMGDAHVYADHEDALNIQLEREPRQFPEVEIAREKGCGIDGWKVEDIIV 320

Query: 250 RSYEPHAAILAKVSV 264
           + Y+PH  I  K++V
Sbjct: 321 KGYDPHKTIAMKMAV 335


>gi|284156868|gb|ADB79637.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156870|gb|ADB79638.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156872|gb|ADB79639.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156882|gb|ADB79644.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156884|gb|ADB79645.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156886|gb|ADB79646.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156888|gb|ADB79647.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156890|gb|ADB79648.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156892|gb|ADB79649.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156900|gb|ADB79653.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156908|gb|ADB79657.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156918|gb|ADB79662.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156920|gb|ADB79663.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
 gi|284156928|gb|ADB79667.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 476

 Score =  304 bits (779), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 122/255 (47%), Positives = 163/255 (63%), Gaps = 21/255 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMIINPN 235
            R PR  P ++    
Sbjct: 461 KRVPRAFPYLVFRRE 475


>gi|66392008|ref|YP_238933.1| dTMP (thymidylate) synthase [Aeromonas phage 31]
 gi|62114845|gb|AAX63693.1| td [Aeromonas phage 31]
          Length = 279

 Score =  304 bits (779), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 125/281 (44%), Positives = 170/281 (60%), Gaps = 19/281 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+  VI  G  + DRTGVGTRS FG  +RFDLSKGFP +T K++ WKSVV ELL
Sbjct: 1   MIQYKDLVEDVIANGRRKTDRTGVGTRSVFGRMLRFDLSKGFPAVTCKQLAWKSVVGELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WF+ G +NV +L R          +IWD   ++         G LGP+YG QWR + + +
Sbjct: 61  WFISGSTNVDHLRRITHGPNSDKRTIWDANYEEQAINLGYSGGYLGPVYGKQWRQFGNKN 120

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ+  ++  ++++P SRR +V AWN   ID MALPPCH  FQF V  GKLS    Q
Sbjct: 121 --PVDQLQKVIDQIKSNPDSRRLLVVAWNPEDIDAMALPPCHFAFQFEVYEGKLSLMWSQ 178

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DV LG+PFNIASY+LL  ++A + G + GE + +  DVH+Y NH +       RSPR
Sbjct: 179 RSVDVGLGLPFNIASYALLVHIIAGICGLEVGELVFSGADVHVYENHVDDLVEIFCRSPR 238

Query: 226 TLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP++      N+ +L +   +D+ L  Y+PH  I   ++V
Sbjct: 239 PLPKLAYYDVANLAELRTMTVDDYVLTEYDPHPPIKMPMAV 279


>gi|331242472|ref|XP_003333882.1| thymidylate synthase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309312872|gb|EFP89463.1| thymidylate synthase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 306

 Score =  304 bits (779), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 128/293 (43%), Positives = 177/293 (60%), Gaps = 30/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGF-PLLTTKKVHWKSVVHEL 59
           +QYL+L+RHVI  G  R DRTG GTRS F  Q +RF LS    PL+TTKKVH KS++HEL
Sbjct: 14  YQYLNLIRHVIHHGQLRPDRTGTGTRSCFAPQQLRFTLSDSTLPLITTKKVHTKSIIHEL 73

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSW------ 101
           LWF+R  ++   L   GV IWD                + G LGPIYG QWR +      
Sbjct: 74  LWFIRASTSTQDLSAAGVRIWDPNGSRSYLDSVGLKEYETGTLGPIYGFQWRHFGASYQG 133

Query: 102 --PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---- 155
              DY G  +DQ+ +++ S+   P  RR I++AWN A + +MALPPCH + QFYV     
Sbjct: 134 PNHDYSGQGVDQLKNLIDSIINRPTDRRMILTAWNPAALHEMALPPCHMMCQFYVTLPDE 193

Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                +LS  LYQRS D+ LG+PFNI SY+LL  M+A V   +  E +  LGD H+Y+NH
Sbjct: 194 DHPKPRLSAILYQRSADLGLGLPFNITSYALLVHMIAQVTKTEPFELVIQLGDAHVYSNH 253

Query: 213 FEQA-DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +   ++QL+R+P   P++ +NP++ D+  F++EDF +  Y PH  +  ++SV
Sbjct: 254 IKPLSEVQLTRTPNPFPKIKLNPSVTDIDHFKFEDFQILDYSPHPRVEMEMSV 306


>gi|284156926|gb|ADB79666.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 477

 Score =  304 bits (779), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 122/255 (47%), Positives = 163/255 (63%), Gaps = 21/255 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 222 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 281

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 282 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 341

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 342 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 401

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 402 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 461

Query: 221 SRSPRTLPQMIINPN 235
            R PR  P ++    
Sbjct: 462 KRVPRAFPYLVFRRE 476


>gi|289618154|emb|CBI55370.1| unnamed protein product [Sordaria macrospora]
          Length = 353

 Score =  303 bits (777), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 128/326 (39%), Positives = 166/326 (50%), Gaps = 63/326 (19%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSK-------------------- 40
           +QYLDL+R +   G  R DRTG GT S F    ++F LSK                    
Sbjct: 28  YQYLDLVRQIFDEGELREDRTGTGTYSIFAPTPLKFALSKPSPSASGASADPSSPSYSFE 87

Query: 41  -GFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKD 87
              PLLTTK+V  K+V+ ELLWF+   ++ + L   GV IWD                K+
Sbjct: 88  PILPLLTTKRVFTKAVLLELLWFISASTSSTTLSSQGVKIWDGNGSRAFLDMLGLSHRKE 147

Query: 88  GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           G+LGP+YG QWR +         DY G  +DQ+  I+ +LR +PY RR I+SAWN   + 
Sbjct: 148 GDLGPVYGFQWRHFGAEYVDAETDYTGQGVDQLQRIIDTLRTNPYDRRLILSAWNPKDMS 207

Query: 140 KMALPPCHCLFQFYVD--------------------NGKLSCQLYQRSGDVFLGIPFNIA 179
           +M LPPCH   QFYV                      G L CQLYQRS D+ LG+PFNIA
Sbjct: 208 QMVLPPCHMFAQFYVSYPGSRERTRKEGEPTKQEKPKGHLHCQLYQRSCDMGLGVPFNIA 267

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV-D 238
           SY+LLT MLA V     G   H +GD H+Y NH +    QL R PR  P + I       
Sbjct: 268 SYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQLEREPREFPTLEIKREKRGS 327

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  ++ EDF ++ YEPH  I  ++SV
Sbjct: 328 IDGWKAEDFVVKGYEPHKTIAMEMSV 353


>gi|284156916|gb|ADB79661.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 462

 Score =  303 bits (776), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 122/255 (47%), Positives = 163/255 (63%), Gaps = 21/255 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 207 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 266

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 267 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 326

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 327 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 386

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 387 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 446

Query: 221 SRSPRTLPQMIINPN 235
            R PR  P ++    
Sbjct: 447 KRVPRAFPYLVFRRE 461


>gi|195941079|ref|ZP_03086461.1| thymidylate synthase [Escherichia coli O157:H7 str. EC4024]
          Length = 206

 Score =  302 bits (775), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 128/206 (62%), Positives = 164/206 (79%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV+YLH + VSIWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNVAYLHENNVSIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDV 206
           Y+LL  M+A     + G+F+ T GD 
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGGDT 206


>gi|264685644|dbj|BAI49171.1| hypothetical protein [Bacillus phage phiNIT1]
          Length = 305

 Score =  302 bits (774), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 123/290 (42%), Positives = 177/290 (61%), Gaps = 29/290 (10%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +Y +L++ ++  G+ + DRTG GT S FG QM FDLSKGFP+LTTKK+ ++ +  EL WF
Sbjct: 7   EYFNLVKKIMDEGTFKDDRTGTGTLSLFGPQMEFDLSKGFPMLTTKKLPFRIIAEELFWF 66

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD---------------------GELGPIYGVQWRSW 101
           + GD+++  L    ++IW + A +                       +LGPIYG QWRSW
Sbjct: 67  INGDTDLKTLLDKNINIWTDDAYRFYLDNGGSLTKSGFIQRTKNAGFDLGPIYGKQWRSW 126

Query: 102 P------DYDGNVI--DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
                  D  G  +  DQ+  +++ +  +P SRRHIVSAWNV  ++ MALPPCH LFQFY
Sbjct: 127 GGVVTVGDSMGYQMKHDQLFRVIKDISTNPDSRRHIVSAWNVGDLEYMALPPCHVLFQFY 186

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V NG LSC+LY RS D+FLG PFNIASY+LLT ++A + G + G+ I+++GD H+Y NH 
Sbjct: 187 VVNGTLSCKLYMRSNDIFLGAPFNIASYALLTHIIAKMTGLKVGKLIYSVGDAHIYVNHL 246

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           +    Q+ R P+ +PQ+ +     ++  +  ED  L  Y+ H  I  K+S
Sbjct: 247 DLLKSQMEREPKEMPQLEVKAVHENIEDYTLEDIVLTGYDAHPTIKGKLS 296


>gi|284156924|gb|ADB79665.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi]
          Length = 471

 Score =  302 bits (773), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 21/251 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL L+  +I+ G+ + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 221 EQYLSLVDRIIREGNVKHDRTGVGTLSIFGAQMRFSLRNNRLPLLTTKRVFWRGVCEELL 280

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WFLRG++    L   GV IWD+               ++ +LGP+YG QWR +       
Sbjct: 281 WFLRGETYAKKLSDKGVHIWDDNGSRAFLDSRGLTEYEEMDLGPVYGFQWRHFGAAYTHH 340

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLS 160
             +YDG  +DQI +IV++L+ +P  RR + +AWN + + +MALPPCH L QFYV NG+LS
Sbjct: 341 DANYDGQGVDQIKAIVETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELS 400

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           C LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD H+Y+NH E  + QL
Sbjct: 401 CMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQL 460

Query: 221 SRSPRTLPQMI 231
            R PR  P ++
Sbjct: 461 KRVPRAFPYLV 471


>gi|37651687|ref|NP_932561.1| Td [Aeromonas phage 44RR2.8t]
 gi|34732987|gb|AAQ81524.1| dTMP (thymidylate) synthase [Aeromonas phage 44RR2.8t]
          Length = 279

 Score =  301 bits (772), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 125/281 (44%), Positives = 170/281 (60%), Gaps = 19/281 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+  VI  G  + DRTGVGTRS FG  +RFDLSKGFP +T K++ WKSVV ELL
Sbjct: 1   MIQYKDLVEDVIANGRRKTDRTGVGTRSVFGRMLRFDLSKGFPAVTCKQLAWKSVVGELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WF+ G +NV +L R          +IWD   ++        DG LGP+YG QWR + + +
Sbjct: 61  WFISGSTNVDHLRRITHGPNSDKRTIWDANYEEQAINLGYSDGYLGPVYGKQWRQFGNKN 120

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ+  ++  ++++P SRR +V AWN   ID MALPPCH  FQF V  GKLS    Q
Sbjct: 121 --PVDQLQKVIDQIKSNPDSRRLLVVAWNPEDIDAMALPPCHFAFQFEVYEGKLSLMWSQ 178

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DV LG+PFNIASY+LL  ++A + G + GE + +  DVH+Y NH +       R PR
Sbjct: 179 RSVDVGLGLPFNIASYALLVHIIAGICGLEVGELVFSGADVHVYENHVDDLVEIFWRDPR 238

Query: 226 TLPQMIINP--NIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            LP++      N+ +L +   +D+ L  Y+PH  I   ++V
Sbjct: 239 PLPKLAYYDVANLAELRTMTVDDYVLTEYDPHPPIKMPMAV 279


>gi|42685|emb|CAA27600.1| thyA (C-terminal) [Escherichia coli]
          Length = 202

 Score =  301 bits (771), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 117/202 (57%), Positives = 152/202 (75%)

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 1   LQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKND 60

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 61  PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 120

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A     + G+F+ T GD HLY+NH +Q  LQLSR PR LP++II      +  +
Sbjct: 121 LLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDY 180

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R+EDF +  Y+PH  I A V++
Sbjct: 181 RFEDFEIEGYDPHPGIKAPVAI 202


>gi|32364179|gb|AAP80238.1| dTMP thymidylate synthase [Enterobacteria phage T2]
 gi|32709475|gb|AAP86756.1| thymidylate synthase [Enterobacteria phage T2H]
 gi|113951991|gb|ABI48931.1| Td [Enterobacteria phage T2H]
          Length = 286

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 122/291 (41%), Positives = 167/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DLSKGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLSKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L +Y  H  I  K++V
Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286


>gi|114768942|ref|ZP_01446568.1| thymidylate synthase [alpha proteobacterium HTCC2255]
 gi|114549859|gb|EAU52740.1| thymidylate synthase [alpha proteobacterium HTCC2255]
          Length = 292

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 132/293 (45%), Positives = 180/293 (61%), Gaps = 30/293 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L +++  G +  DRTGVGT S FGYQ+RF+L +GFP +TTKK+ W+S+V ELL
Sbjct: 1   MKQYLDALNYIMDNGEEVSDRTGVGTLSVFGYQIRFNLQEGFPAVTTKKLAWRSIVGELL 60

Query: 61  WFLRGDSNVSYLHR-----------HGVSIWDEWADKDG------------ELGPIYGVQ 97
           WFL G ++   L             H  +IW   AD  G            ELGP+YG Q
Sbjct: 61  WFLEGSTDERRLAELTFNKDRTDLVHKKTIWTANADAQGAELGYENNDLIKELGPVYGHQ 120

Query: 98  WRSWPDYDGN---VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154
           WR +   D +     DQI  ++  ++ +P SRR I+SAWN   I++MALPPCH + QF V
Sbjct: 121 WRHFDGTDKDISLSTDQIIWLINEIKNNPDSRRMILSAWNPNQINEMALPPCHTMAQFRV 180

Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
            NGKLSCQLYQRS D+FLG+PFNIASYSLLT MLA +   + G F+   GD H+Y NH +
Sbjct: 181 MNGKLSCQLYQRSADMFLGVPFNIASYSLLTHMLAQLCDLKVGSFVWVGGDCHIYKNHKK 240

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKVSV 264
           Q   QL R+P++LP + + P+  +L      R   + L++Y+P  +I A +++
Sbjct: 241 QVLEQLKRTPKSLPNLEM-PSFSNLDELLQTRPIGYVLKNYDPMDSIKAPMAI 292


>gi|83816568|ref|YP_444564.1| thymidylate synthase [Salinibacter ruber DSM 13855]
 gi|83757962|gb|ABC46075.1| thymidylate synthase [Salinibacter ruber DSM 13855]
          Length = 355

 Score =  300 bits (768), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 129/296 (43%), Positives = 174/296 (58%), Gaps = 34/296 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L+ ++  G+   DRTG GT   FG Q+RFDL++GFPLLTTK+V  + V  ELL
Sbjct: 62  MRQYLDYLQDILDHGTRHEDRTGTGTIRVFGRQLRFDLTEGFPLLTTKRVWMRGVTEELL 121

Query: 61  WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92
           WFLRG++N+  L +  VSIW                            D +A++ G+LGP
Sbjct: 122 WFLRGETNIQSLVQADVSIWTDWPLQRYRDETGDEISQEAFEERIATDDAFAERWGDLGP 181

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR +   +G  +DQI  +V+ LR  P+SRRH+VSAW+ A I+  ALPPCH  FQ 
Sbjct: 182 VYGTQWRDFEGPEGR-VDQIERLVRGLRETPHSRRHVVSAWHPAQIEDAALPPCHYAFQC 240

Query: 153 YVD----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           +V+    +G+LS    QRS D FLG+PFNIASY+LLT MLA   G    E I   GD H+
Sbjct: 241 FVEGEPGDGRLSLMWQQRSVDSFLGLPFNIASYALLTRMLAQQAGLTPHELIFNGGDCHI 300

Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Y NH EQ + QL+R+P   P + +      +     +D T+  YE H A+ A ++V
Sbjct: 301 YQNHVEQVEEQLTRTPYDRPTLRL-RQRDSIFEHAADDVTIEDYEHHPALTAPIAV 355


>gi|87199994|ref|YP_497251.1| thymidylate synthase [Novosphingobium aromaticivorans DSM 12444]
 gi|87135675|gb|ABD26417.1| thymidylate synthase [Novosphingobium aromaticivorans DSM 12444]
          Length = 316

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 127/301 (42%), Positives = 169/301 (56%), Gaps = 39/301 (12%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL+R + + G +R DRTGVGTRS FG ++RFDLS G  PLLTTK+V+WK+   E LW
Sbjct: 16  QYLDLMRRIWEHGDERVDRTGVGTRSVFGAELRFDLSDGRMPLLTTKRVYWKTATREFLW 75

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93
           FL G++N+  L   GV IW +W                              + G+LGP+
Sbjct: 76  FLTGNTNIRPLCAQGVEIWTDWPLDRYRKETGDDISRKDFSARIVADEAFALRWGDLGPV 135

Query: 94  YGVQWRSWP----------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           YG QW  WP                ++Q++ +V SLR +P SRRHI+  WNVA ID+MAL
Sbjct: 136 YGKQWVDWPVFEPVGDGLFRRREAGVNQVADVVDSLRHNPGSRRHIIEGWNVAEIDRMAL 195

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           PPCH  +QF+V   +L+  LYQRS DV LG+PFN+   +LL  +LA     Q GE +   
Sbjct: 196 PPCHKTYQFHVSGNRLNGLLYQRSCDVALGLPFNLWGAALLVRLLAQQCDLQPGELVWMG 255

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           GD HLY NH +  + QLSR P   P++ I      +  +R EDF +  Y P   + A V+
Sbjct: 256 GDTHLYLNHADLVEAQLSREPEGDPRLAILRRPDSIFGYRIEDFEVTGYAPQGHLSAPVA 315

Query: 264 V 264
           V
Sbjct: 316 V 316


>gi|294506312|ref|YP_003570370.1| thymidylate synthase [Salinibacter ruber M8]
 gi|294342640|emb|CBH23418.1| thymidylate synthase [Salinibacter ruber M8]
          Length = 294

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 129/296 (43%), Positives = 174/296 (58%), Gaps = 34/296 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD L+ ++  G+   DRTG GT   FG Q+RFDL++GFPLLTTK+V  + V  ELL
Sbjct: 1   MRQYLDYLQDILDHGTRHEDRTGTGTIRVFGRQLRFDLTEGFPLLTTKRVWMRGVTEELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIW----------------------------DEWADKDGELGP 92
           WFLRG++N+  L + GVSIW                            D +A++ G+LGP
Sbjct: 61  WFLRGETNIQSLVQAGVSIWTDWPLQRYRDETGDEISQEAFEERIATDDAFAEQWGDLGP 120

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           +YG QWR +   +G  +DQI  +V+ LR  P+SRRH+VSAW+ A I+  ALPPCH  FQ 
Sbjct: 121 VYGTQWRDFEGPEGR-VDQIERLVRGLRETPHSRRHVVSAWHPAQIEDAALPPCHYAFQC 179

Query: 153 YVD----NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           +V+    +G+LS    QRS D FLG+PFNIASY+LLT MLA   G    E I   GD H+
Sbjct: 180 FVEGEPGDGRLSLMWQQRSVDSFLGLPFNIASYALLTRMLAQQAGLTPHELIFNGGDCHI 239

Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Y NH EQ + QL+R+P   P + +      +     +D  +  YE H A+ A ++V
Sbjct: 240 YQNHVEQVEEQLTRTPYDRPTLRL-RQRDSIFEHAADDVAIEDYEHHPALTAPIAV 294


>gi|224471862|sp|Q2G6V6|TYSY_NOVAD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 314

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 127/301 (42%), Positives = 169/301 (56%), Gaps = 39/301 (12%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL+R + + G +R DRTGVGTRS FG ++RFDLS G  PLLTTK+V+WK+   E LW
Sbjct: 14  QYLDLMRRIWEHGDERVDRTGVGTRSVFGAELRFDLSDGRMPLLTTKRVYWKTATREFLW 73

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93
           FL G++N+  L   GV IW +W                              + G+LGP+
Sbjct: 74  FLTGNTNIRPLCAQGVEIWTDWPLDRYRKETGDDISRKDFSARIVADEAFALRWGDLGPV 133

Query: 94  YGVQWRSWP----------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           YG QW  WP                ++Q++ +V SLR +P SRRHI+  WNVA ID+MAL
Sbjct: 134 YGKQWVDWPVFEPVGDGLFRRREAGVNQVADVVDSLRHNPGSRRHIIEGWNVAEIDRMAL 193

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           PPCH  +QF+V   +L+  LYQRS DV LG+PFN+   +LL  +LA     Q GE +   
Sbjct: 194 PPCHKTYQFHVSGNRLNGLLYQRSCDVALGLPFNLWGAALLVRLLAQQCDLQPGELVWMG 253

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           GD HLY NH +  + QLSR P   P++ I      +  +R EDF +  Y P   + A V+
Sbjct: 254 GDTHLYLNHADLVEAQLSREPEGDPRLAILRRPDSIFGYRIEDFEVTGYAPQGHLSAPVA 313

Query: 264 V 264
           V
Sbjct: 314 V 314


>gi|15078937|ref|NP_149688.1| 225R [Invertebrate iridescent virus 6]
 gi|82039411|sp|Q9WBI3|TYSY_IIV6 RecName: Full=Probable thymidylate synthase 225R
 gi|4494906|gb|AAD21329.1| 225R [Invertebrate iridescent virus 6]
          Length = 295

 Score =  299 bits (767), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 126/287 (43%), Positives = 178/287 (62%), Gaps = 25/287 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+LL  V+  G DR DRTG+GT++ FG Q++F+L   FPLLTTKKV WK VV ELLW
Sbjct: 8   KQYLNLLEKVLFQGEDRDDRTGIGTKNVFGEQLKFNLRTSFPLLTTKKVFWKGVVEELLW 67

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSWP------DYDG 106
           F+ G ++VS L++ GV IW++ A+         K  +LGPIYG QWR +       D   
Sbjct: 68  FISGSTDVSVLNQKGVKIWNKNAESFYTQQNLFKKNDLGPIYGFQWRHYGENYIGCDNKY 127

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-----NGKLSC 161
             IDQ+ +I+ +++ +P+ RR I+ AWN     KMALPPCHC+  F V        +LSC
Sbjct: 128 GGIDQLKNIITTIQNEPWDRRMILLAWNPKDNSKMALPPCHCIAHFDVSSKINGKRELSC 187

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIG-----FQYGEFIHTLGDVHLYNNHFEQA 216
            L+QRS D+ LG+PFNIASY+LLT ++A V          G+F+HTL +VH+Y NH +  
Sbjct: 188 HLFQRSADMGLGVPFNIASYALLTHIIAHVSSTNTELIVPGDFVHTLSNVHIYKNHIKAL 247

Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
             Q+SR PR  P + I     ++ +F  +DF L+ Y P+ A+  +++
Sbjct: 248 TEQISRIPRKFPTLEIINKNKNIDAFSSKDFVLKDYNPYPALEMEMA 294


>gi|9631429|ref|NP_048309.1| ORF MSV238 putative thymidylate synthase, similar to Arabidopsis
           thaliana GB:L08594 [Melanoplus sanguinipes
           entomopoxvirus]
 gi|4049782|gb|AAC97742.1| ORF MSV238 putative thymidylate synthase, similar to Arabidopsis
           thaliana GB:L08594 [Melanoplus sanguinipes
           entomopoxvirus]
          Length = 292

 Score =  299 bits (767), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 109/284 (38%), Positives = 164/284 (57%), Gaps = 21/284 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL  +  ++  G   ++RTGV T++ +G  M++ L   FPL TTK + W+ +V ELLW
Sbjct: 9   YQYLKGISEILSNGRITKNRTGVDTKTVYGLTMKYKLDDSFPLFTTKSMFWRGIVEELLW 68

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
           F+ G +N + L   G+ IWDE               K+G+LGP+YG QWR +        
Sbjct: 69  FISGSTNTNILKNKGIHIWDENGSLKYIKKRGFNDRKEGDLGPVYGFQWRHFGAKYIDMD 128

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LS 160
            +Y     DQ++ I+  ++  P SR  I++AWN   ++ M +PPCHC  QF+V N K L+
Sbjct: 129 TNYTNQGFDQLTHIINKIKNKPESRNIILTAWNPIDVENMVIPPCHCFVQFHVINNKYLT 188

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQ+YQRS D+ LG+PFN+ASYSLLT M+A +   +  EFIH +G+ H+Y NH      QL
Sbjct: 189 CQMYQRSADMGLGVPFNVASYSLLTYMIAHLTNLKPYEFIHNIGNAHIYVNHINGLKKQL 248

Query: 221 SRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R+P   P++ I   + ++  F+++DF L  Y     I   + V
Sbjct: 249 ERTPNPFPKLKIKRQVDNIDDFKFDDFELIDYNHLGKIKLDMVV 292


>gi|323941564|gb|EGB37745.1| thymidylate synthase [Escherichia coli E482]
          Length = 219

 Score =  299 bits (765), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 124/204 (60%), Positives = 161/204 (78%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLG 204
           Y+LL  M+A     + G+F+ T  
Sbjct: 181 YALLVHMMAQQCDLEVGDFVWTGA 204


>gi|321468900|gb|EFX79883.1| hypothetical protein DAPPUDRAFT_319193 [Daphnia pulex]
          Length = 255

 Score =  298 bits (764), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 116/243 (47%), Positives = 154/243 (63%), Gaps = 20/243 (8%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGE 89
           FPLLTTK+V W+ ++ ELLWF+RG +N + L    + IWD  +             ++G 
Sbjct: 13  FPLLTTKRVFWRGLMEELLWFVRGSTNANKLREKDIHIWDGNSSREFLDSLGLKDREEGG 72

Query: 90  LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGPIYG QWR +         DY    +DQ+ +++ ++R +P  RR I++AWN + +  M
Sbjct: 73  LGPIYGFQWRHFGANYDNMHSDYSCQGVDQLKNLINTIRTNPDDRRMILTAWNPSALPLM 132

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIH 201
           ALPPCHCL QFYV NG+LSCQ+YQRS DV LG+PFNIASYSLLT M+A V G   GEFIH
Sbjct: 133 ALPPCHCLAQFYVANGELSCQMYQRSADVGLGVPFNIASYSLLTCMIARVTGLNPGEFIH 192

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
           TLGD H+YNNH    + QL R PR  P + I   + D+  F+ +DF L  Y+PH  I   
Sbjct: 193 TLGDAHVYNNHISALEKQLERQPRPFPTLKIIRKVSDIDDFKADDFVLEGYDPHPKIPMD 252

Query: 262 VSV 264
           ++V
Sbjct: 253 MAV 255


>gi|294661477|ref|YP_003579930.1| Td thymidylate synthetase [Klebsiella phage KP15]
 gi|292660638|gb|ADE34886.1| Td thymidylate synthetase [Klebsiella phage KP15]
          Length = 291

 Score =  298 bits (764), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 132/292 (45%), Positives = 176/292 (60%), Gaps = 29/292 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD+++ V+  G +  DRTGVGT   FG Q R+DL++GFP  T KK+ +K   HEL 
Sbjct: 1   MKQYLDIIKLVLDNGVESTDRTGVGTIRIFGAQARWDLNRGFPATTCKKLFFKPCKHELQ 60

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWADKD--------GELGPIYGVQWRSWPD-- 103
           WFL G +NV  L R          +IWD+  +K         G LGPIYG QWRS+    
Sbjct: 61  WFLSGSTNVEELRRMTWGENSDKRTIWDDNYEKQAIDLGYDSGYLGPIYGHQWRSFGSLY 120

Query: 104 ------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
                 Y G+ +DQI+ +++ L++ P  R  IVSAWN   +D MAL PCHC FQF V NG
Sbjct: 121 GDDDSYYGGSGVDQIAKVIEQLKSTPDDRGIIVSAWNPVDLDDMALRPCHCFFQFVVING 180

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           KLS Q YQRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N  EQA 
Sbjct: 181 KLSLQWYQRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAVEQAK 240

Query: 218 LQLS--RSPRTLPQMIINPNIVDLLSFR---YEDFTLRSYEPHAAILAKVSV 264
             L   RSP  LP + + P +  LL      ++  TL  Y  H ++ A+++V
Sbjct: 241 ELLQPNRSPMPLPILKM-PKVNSLLDLDQEFFDSITLEGYHNHGSLKAEMAV 291


>gi|312262725|gb|ADQ53020.1| Td thymidylate synthetase [Aeromonas phage PX29]
          Length = 277

 Score =  298 bits (764), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 123/282 (43%), Positives = 171/282 (60%), Gaps = 23/282 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLD++++VI+ G D  DRTGVGTRS  G   R D++ GFP +TTK + WK+V  ELL
Sbjct: 1   MKYYLDIMKYVIENGEDEMDRTGVGTRSILGQVFRHDMADGFPAVTTKTLAWKAVRGELL 60

Query: 61  WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WF+ G +NV  L    +GV     +IWD+  +         DG+LGP+YG QWR +    
Sbjct: 61  WFMNGFTNVEVLRAMTYGVGSSTKTIWDDNFNHQGVALGYTDGDLGPVYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            N +DQ++  ++ ++ +P  RR+IV AWN A +DKMALPPCH LF+F V  G+L+   YQ
Sbjct: 117 -NGVDQLAKAIERIKTNPECRRNIVCAWNPADLDKMALPPCHVLFRFSVKRGRLNLTWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D+ LGIPFNIASY LL  M+A + G++ G       D H+Y+NHF+Q   QL R P 
Sbjct: 176 RSCDLLLGIPFNIASYGLLLEMVAHITGYKAGILTGMFDDAHIYHNHFDQVQEQLQRVPY 235

Query: 226 TLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264
            LP+++       L        +D  L  Y+ H+AI A ++V
Sbjct: 236 DLPKLVFKKRFTTLEEACNLSLDDIQLEDYKCHSAIKAPMAV 277


>gi|103486818|ref|YP_616379.1| thymidylate synthase [Sphingopyxis alaskensis RB2256]
 gi|98976895|gb|ABF53046.1| thymidylate synthase [Sphingopyxis alaskensis RB2256]
          Length = 320

 Score =  298 bits (763), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 132/302 (43%), Positives = 174/302 (57%), Gaps = 40/302 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61
           QYLDL+R +   G +R DRTGVGTRS FG  MRF L     PLLTTK+V+WK+ + ELLW
Sbjct: 19  QYLDLMRRIWVDGDERVDRTGVGTRSLFGETMRFSLKDDAIPLLTTKRVYWKTALRELLW 78

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93
           FL GD+N+  L   GV IW +W                              K G+LGP+
Sbjct: 79  FLTGDTNIRPLVAQGVKIWTDWPLEKYRKATGEAISATDFEARIVADADFAAKWGDLGPV 138

Query: 94  YGVQWRSWPDYD----------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           YG QW +WP Y+           +  +QI++++ SL+ +P SRRHI + WNVA +D+MAL
Sbjct: 139 YGHQWVNWPRYEPAGGGLFRRADHGYNQIAALIDSLKNNPGSRRHIFTGWNVADLDRMAL 198

Query: 144 PPCHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           PPCH  +QF+V  +G LSC L+QRS D+ LG  FNI   +LLT M+A   G    E + T
Sbjct: 199 PPCHMTYQFHVRSDGGLSCLLFQRSCDLGLGFAFNIFEAALLTRMVAEQCGLYAHEVVWT 258

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
            GDVHLY NH E  + QL+R P   P++ I      +  +R+EDF +  Y P A I A V
Sbjct: 259 GGDVHLYLNHAELVEQQLARVPEGKPRLRILRRPPSIFEYRFEDFVVEDYAPQAHISAPV 318

Query: 263 SV 264
           +V
Sbjct: 319 AV 320


>gi|294011284|ref|YP_003544744.1| thymidylate synthase [Sphingobium japonicum UT26S]
 gi|292674614|dbj|BAI96132.1| thymidylate synthase [Sphingobium japonicum UT26S]
          Length = 311

 Score =  297 bits (762), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 125/302 (41%), Positives = 167/302 (55%), Gaps = 39/302 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDL+RH+   G +R DRTGVGTRS  G  MRF L+    PLLTTK+V+WK    E+L
Sbjct: 10  QQYLDLMRHIWLHGDERIDRTGVGTRSILGATMRFSLADDAVPLLTTKRVYWKVAAREML 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL GD+N+  L R GV IW +W                              + G+LGP
Sbjct: 70  WFLTGDTNIRELVRQGVHIWTDWPLDSYRKATGEEIDRDAFEARIVEDQAFAARWGDLGP 129

Query: 93  IYGVQWRSWPDYDG----------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
           +YG QW +WP Y+              +QI+ +V+++R  P SRR + + WNVA + +MA
Sbjct: 130 VYGAQWVNWPRYEEVGDGLYRRAAQGHNQIADLVEAIRTSPGSRRLLFTGWNVAEVSRMA 189

Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           LPPCH  +QF V NG+L+  L+QRS D+ LG  FNI   S++T MLA     + GE +  
Sbjct: 190 LPPCHMTYQFQVANGRLNGLLFQRSCDLGLGFAFNIFGLSMITRMLAQQCDLEAGEIVWQ 249

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
            GDVHLY NH E  + Q+ R P   P++ IN     +  +R EDF +  Y P   I A V
Sbjct: 250 GGDVHLYLNHAELVEEQIGRIPSGSPKLRINRRPSSIFDYRIEDFEVADYAPQRHIAAPV 309

Query: 263 SV 264
           +V
Sbjct: 310 AV 311


>gi|310722567|ref|YP_003969390.1| dTMP synthase [Aeromonas phage phiAS5]
 gi|306021410|gb|ADM79944.1| dTMP synthase [Aeromonas phage phiAS5]
          Length = 277

 Score =  297 bits (762), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 123/282 (43%), Positives = 170/282 (60%), Gaps = 23/282 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL++ ++  G D  DRTGVGTRS  G  ++FD++ GFP  TTK + WK+V  ELL
Sbjct: 1   MKNYQDLMQDILTHGVDEMDRTGVGTRSVVGRMIQFDMADGFPATTTKTLAWKAVRGELL 60

Query: 61  WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WF+ G +NV  L    +GV     +IWD+  +         DGELGP+YG QWR +    
Sbjct: 61  WFMNGFTNVETLRTMTYGVGSSTKTIWDDNFNNQGVALGYTDGELGPVYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            N +DQ++  ++ ++ +P  RR+IVSAWN   +  MALPPCH LF+F V  G+L+   YQ
Sbjct: 117 -NGVDQLAKAIERIKTNPECRRNIVSAWNPVDLPHMALPPCHVLFRFSVKAGRLNLTWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D FLG+ FNIASY LL  ++A + G++ G     L DVH+YNNHFEQ   QLSR P 
Sbjct: 176 RSVDTFLGLAFNIASYGLLLEIVAKITGYKAGLLTGMLDDVHVYNNHFEQVREQLSREPY 235

Query: 226 TLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264
            LP+++   +   L        +D  L  Y+ H+AI A ++V
Sbjct: 236 ELPKLVFKKDFTTLEEACNLSVDDIQLEDYKCHSAIKAPMAV 277


>gi|32709473|gb|AAP86755.1| thymidylate synthase [Enterobacteria phage RB3]
          Length = 286

 Score =  297 bits (762), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 121/291 (41%), Positives = 168/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DLSKGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLSKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L+ Y+ H  +  K++V
Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286


>gi|32453722|ref|NP_861931.1| dTMP (thymidylate) synthase [Enterobacteria phage RB69]
 gi|32350541|gb|AAP76140.1| dTMP (thymidylate) synthase [Enterobacteria phage RB69]
          Length = 286

 Score =  297 bits (762), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 123/291 (42%), Positives = 172/291 (59%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L+  +++ G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQYLINDILENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WF+ G +NV+ L          G +IWD+  +          GELGPIYG QWR +    
Sbjct: 61  WFMSGSTNVNDLRIRTHGSLIEGKTIWDDNYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ+   +  ++A P  RR IVSAWN A ID+MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQLVKTIDRIKALPNDRRQIVSAWNPAEIDQMALPPCHMFYQFNVRNGHLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ LT ++A +     G+ + + G+ H+Y+NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCKEVLRREPK 235

Query: 226 TLPQMIIN--------PNIVDLL----SFRYEDFTLRSYEPHAAILAKVSV 264
            L  + IN        P  + +     +  + DF L++YE H  I AK++V
Sbjct: 236 ELCSLEINWPSNFENWPTKIQMDWVTGTMTHSDFVLKNYESHPTIKAKMAV 286


>gi|304404471|ref|ZP_07386132.1| thymidylate synthase [Paenibacillus curdlanolyticus YK9]
 gi|304346278|gb|EFM12111.1| thymidylate synthase [Paenibacillus curdlanolyticus YK9]
          Length = 281

 Score =  297 bits (761), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 124/281 (44%), Positives = 170/281 (60%), Gaps = 50/281 (17%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK------- 86
           MRFDL++GFPLLTTK++ ++ +V ELLWF++GD+N+ YL +H  +IW+EWA K       
Sbjct: 1   MRFDLNEGFPLLTTKRIPFRLIVSELLWFMKGDTNIRYLLQHNNNIWNEWAFKRWVESAS 60

Query: 87  -------------------------------------------DGELGPIYGVQWRSWPD 103
                                                       GELG +YG QWR+W  
Sbjct: 61  YEGPDMANFGLRSQTDEDFAASYTEQMNRFKELVLTDDAFAAQFGELGDVYGKQWRAWQT 120

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
             G+ +DQ+  +++ ++ +P SRR IVSAWN   I  MALPPCH LFQFYV +GKLSCQL
Sbjct: 121 TKGDTLDQLHDVIEMIKRNPDSRRLIVSAWNPEDIPLMALPPCHTLFQFYVADGKLSCQL 180

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+FLGIPFNIASY+LLT ++A   G   GEF+HTLGD H+Y NH +Q   QL+R+
Sbjct: 181 YQRSADIFLGIPFNIASYALLTHLIARECGLAVGEFVHTLGDAHIYTNHMDQIQEQLARA 240

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P++LP++ ++ +   +     ED  +  Y+PH  I A V+V
Sbjct: 241 PKSLPKLELSGDWTSVFDAEVEDIAVEGYDPHPTIKAPVAV 281


>gi|213650267|ref|ZP_03380320.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|323222587|gb|EGA06952.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
          Length = 202

 Score =  297 bits (761), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 116/202 (57%), Positives = 151/202 (74%)

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           ++GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+ D
Sbjct: 1   MQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLKND 60

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 61  PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 120

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L  +
Sbjct: 121 LLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDY 180

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R++DF +  Y+PH  I A V++
Sbjct: 181 RFDDFEIEGYDPHPGIKAPVAI 202


>gi|224471864|sp|Q1GTH6|TYSY_SPHAL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 311

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 132/302 (43%), Positives = 174/302 (57%), Gaps = 40/302 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLW 61
           QYLDL+R +   G +R DRTGVGTRS FG  MRF L     PLLTTK+V+WK+ + ELLW
Sbjct: 10  QYLDLMRRIWVDGDERVDRTGVGTRSLFGETMRFSLKDDAIPLLTTKRVYWKTALRELLW 69

Query: 62  FLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGPI 93
           FL GD+N+  L   GV IW +W                              K G+LGP+
Sbjct: 70  FLTGDTNIRPLVAQGVKIWTDWPLEKYRKATGEAISATDFEARIVADADFAAKWGDLGPV 129

Query: 94  YGVQWRSWPDYD----------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           YG QW +WP Y+           +  +QI++++ SL+ +P SRRHI + WNVA +D+MAL
Sbjct: 130 YGHQWVNWPRYEPAGGGLFRRADHGYNQIAALIDSLKNNPGSRRHIFTGWNVADLDRMAL 189

Query: 144 PPCHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           PPCH  +QF+V  +G LSC L+QRS D+ LG  FNI   +LLT M+A   G    E + T
Sbjct: 190 PPCHMTYQFHVRSDGGLSCLLFQRSCDLGLGFAFNIFEAALLTRMVAEQCGLYAHEVVWT 249

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
            GDVHLY NH E  + QL+R P   P++ I      +  +R+EDF +  Y P A I A V
Sbjct: 250 GGDVHLYLNHAELVEQQLARVPEGKPRLRILRRPPSIFEYRFEDFVVEDYAPQAHISAPV 309

Query: 263 SV 264
           +V
Sbjct: 310 AV 311


>gi|3033367|gb|AAC12816.1| thymidylate synthase [Enterobacteria phage T4]
 gi|299780595|gb|ADJ39957.1| dTMP (thymidylate) synthase [Enterobacteria phage T4T]
          Length = 286

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 120/291 (41%), Positives = 167/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L +Y  H  I  K++V
Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286


>gi|9632831|ref|NP_049848.1| dTMP (thymidylate) synthase [Enterobacteria phage T4]
 gi|136606|sp|P00471|TYSY_BPT4 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157833959|pdb|1TIS|A Chain A, Crystal Structure Of Thymidylate Synthase From T4 Phage
 gi|5354455|gb|AAD42662.1|AF158101_249 dTMP (thymidylate) synthase [Enterobacteria phage T4]
 gi|215853|gb|AAA32492.1| thymidylate synthase [Enterobacteria phage T4]
          Length = 286

 Score =  297 bits (760), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 120/291 (41%), Positives = 167/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGSKLRWDLTKGFPAVTTKKLAWKACIAELI 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L +Y  H  I  K++V
Sbjct: 236 ELCELVISGLPYKFRYLSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286


>gi|302876686|ref|YP_003845319.1| thymidylate synthase [Clostridium cellulovorans 743B]
 gi|307687361|ref|ZP_07629807.1| thymidylate synthase [Clostridium cellulovorans 743B]
 gi|302579543|gb|ADL53555.1| thymidylate synthase [Clostridium cellulovorans 743B]
          Length = 263

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 104/266 (39%), Positives = 153/266 (57%), Gaps = 11/266 (4%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLD+++ ++  G   ++RTGV T        +F+L K FP+LTTK V +K+ V ELLW
Sbjct: 6   KQYLDIVQDILDNGYYDQNRTGVATYKLPHKVFQFNLEKEFPILTTKFVAFKTAVKELLW 65

Query: 62  FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
             +  SN V  L    VSIWDEW  +DG +G  YG Q   +         QI  ++++L+
Sbjct: 66  IYKDQSNDVRKLQEQNVSIWDEWMLEDGTIGKAYGYQVAKYK--------QIDKLIEALK 117

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +P  RR +++ WN+  +  MAL PC  L  + V +G+L+C L QRSGD+ LG+PFN+A 
Sbjct: 118 DNPQDRRMMINLWNIDDLKDMALQPCCFLTLWDVTDGRLNCMLVQRSGDIPLGVPFNMAQ 177

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVD 238
           Y++L  ++A V G + G F H + + H+Y N  E   LQL+R       P++ INP I +
Sbjct: 178 YAVLVHLIAQVTGLKPGLFTHVINNAHIYENQVEGMKLQLTRREEAYDAPKIWINPEIKN 237

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
              F+ ED  L  Y+ H  I  +VSV
Sbjct: 238 FYDFKPEDIKLEGYQHHPVIKMEVSV 263


>gi|32709465|gb|AAP86751.1| thymidylate synthase [Enterobacteria phage LZ2]
          Length = 286

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 120/291 (41%), Positives = 168/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L+ Y+ H  +  K++V
Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286


>gi|282174112|ref|YP_003358214.1| ORF75 [Anguillid herpesvirus 1]
 gi|281308955|gb|ADA57838.1| ORF75 [Anguillid herpesvirus 1]
          Length = 301

 Score =  296 bits (758), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 119/296 (40%), Positives = 176/296 (59%), Gaps = 35/296 (11%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGT-RSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           Y++ ++ ++  G +RRDRT VG+    FG+  R++L +GFPL TTK+V W++V  EL+WF
Sbjct: 6   YIEHVKSILTDGVERRDRTSVGSSLVKFGHMGRYNLRRGFPLFTTKRVFWRAVAEELIWF 65

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           L+G ++   L   GV+IW +               ++ +LGP+YG QWR W         
Sbjct: 66  LKGCTDGVKLAEKGVNIWRDNGTRSFLDSRGLTDHREHDLGPVYGFQWRHWGASYVGADA 125

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------- 155
           +Y G   DQI SI+ +L+A   +RR ++SAWNV+ + KMALPPCH   QF++D       
Sbjct: 126 EYSGQGHDQIQSILSNLKARNNNRRLLLSAWNVSDVPKMALPPCHLFAQFHIDFPAGYQH 185

Query: 156 -------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
                    +LSC  YQRS D+ LG+PFN+ASY+LLT ++A +   + GE IH++GD H+
Sbjct: 186 GTITETIKPRLSCLFYQRSADMGLGVPFNVASYALLTHIMAHLADLEVGELIHSIGDAHI 245

Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Y NH  Q +LQ+ R  R  PQ+ INP +  L    +ED T+  Y PH  I  +++V
Sbjct: 246 YTNHVAQLELQVKREIRPPPQLTINPRVKSLEDLTFEDLTITGYNPHPTIKMEMAV 301


>gi|32709471|gb|AAP86754.1| thymidylate synthase [Enterobacteria phage RB27]
          Length = 286

 Score =  296 bits (757), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 121/291 (41%), Positives = 168/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  +V  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHVFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L+ Y+ H  +  K++V
Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286


>gi|291290454|dbj|BAI83249.1| dTMP (thymidylate) synthase [Enterobacteria phage AR1]
          Length = 286

 Score =  296 bits (757), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 121/291 (41%), Positives = 168/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  +V  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPK 235

Query: 226 TLPQMII------------NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            L +++I               +  +L  R +DF L+ Y+ H  +  K++V
Sbjct: 236 ELCELVIGGLPYKFRYLSTKEQLEYILKLRPKDFVLKDYQSHGVLKGKMAV 286


>gi|72073194|ref|XP_797720.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115944415|ref|XP_001195886.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 309

 Score =  296 bits (757), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 124/266 (46%), Positives = 163/266 (61%), Gaps = 31/266 (11%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDL+RH+   G  + DRTG GT+S FG Q R++L   FPLLTTK+V W+ V  ELLWF
Sbjct: 46  QYLDLIRHIQAHGHVKGDRTGTGTKSIFGAQSRYNLRDQFPLLTTKRVFWRGVAEELLWF 105

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N + L    + IWD    KD            G+LGP+YG QWR +         
Sbjct: 106 VKGCTNATELQDKKIHIWDANGSKDFLEKRGLGHYEEGDLGPVYGFQWRHFGAEYKDRFT 165

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+++++++++ +P  RR I+SAWN   + KMALPPCH   QFYV NG+LSCQ
Sbjct: 166 DYTGQGVDQLANVIETIKNNPDDRRIIMSAWNPPDLPKMALPPCHAFVQFYVCNGELSCQ 225

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASYSLLT M+A V G + G+F+HTLGD H+Y NH E    Q+S 
Sbjct: 226 LYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKPGDFVHTLGDAHVYLNHIEPLKEQVS- 284

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFT 248
                     +        F   DF 
Sbjct: 285 ----------DWEYKTSYGFERNDFV 300


>gi|330859629|emb|CBX69968.1| thymidylate synthase [Yersinia enterocolitica W22703]
          Length = 219

 Score =  295 bits (756), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 127/210 (60%), Positives = 160/210 (76%), Gaps = 1/210 (0%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ V++ G+ + DRTG GT S FG+QMRF+L  GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLDLMKKVLEEGTTKDDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL GD+N+ YL  + VSIWDEWAD++G+LGP+YG QWR+W   DG  IDQ+S +VQ L+
Sbjct: 61  WFLNGDTNIGYLKENNVSIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQLSKVVQQLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +D+MAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 121 QDPNSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 180

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           Y+LL  M+A       G+F+ T G +  Y 
Sbjct: 181 YALLVHMMAQQCDLAVGDFVWT-GAIRTYT 209


>gi|66391514|ref|YP_239039.1| Td thymidylate synthetase [Enterobacteria phage RB43]
 gi|62288602|gb|AAX78585.1| Td thymidylate synthetase [Enterobacteria phage RB43]
          Length = 285

 Score =  294 bits (754), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 129/286 (45%), Positives = 171/286 (59%), Gaps = 23/286 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++R V+  G +  DRTGVGT   FG Q R++L++GFP  T+K++ +K   HEL 
Sbjct: 1   MKQYLDIIRLVLANGVESTDRTGVGTIRIFGAQTRWNLAEGFPATTSKQLFFKPCKHELQ 60

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWADK--------DGELGPIYGVQWRSWPD-- 103
           WFL G +NV  L            +IWD+  +          G LGPIYG QWRS+    
Sbjct: 61  WFLSGSTNVDELREMTWGIGSDKRTIWDDNYENQAKSLGYSHGYLGPIYGHQWRSFGGDL 120

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y  + +DQI+ IV  L+  P  R  IVSAWN   +DKMAL PCHC FQF V NGKLS Q 
Sbjct: 121 YGNHSVDQIARIVNELKTTPDDRGIIVSAWNPVDLDKMALRPCHCFFQFVVINGKLSLQW 180

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-- 221
           YQRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N  EQA   L   
Sbjct: 181 YQRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAIEQAKELLKPE 240

Query: 222 RSPRTLPQMIINPNIVDLLSFR---YEDFTLRSYEPHAAILAKVSV 264
           R P  LP + + P +  LL      ++   L+ Y  H ++ A ++V
Sbjct: 241 REPLPLPTLYM-PKVNSLLDLDQEFFDSIHLKDYNHHGSLKAAMAV 285


>gi|71013081|ref|XP_758554.1| hypothetical protein UM02407.1 [Ustilago maydis 521]
 gi|46098212|gb|EAK83445.1| hypothetical protein UM02407.1 [Ustilago maydis 521]
          Length = 554

 Score =  294 bits (754), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 122/295 (41%), Positives = 173/295 (58%), Gaps = 33/295 (11%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ--MRFDLSKGF-PLLTTKKVHWKSVVHEL 59
           QYL+L++ VI  G  R DRTG GT + F  Q  +RFDL+ G  PLLTTK+V ++ V+ EL
Sbjct: 260 QYLELVQRVISTGESRPDRTGTGTLALFAPQPSLRFDLTNGTLPLLTTKRVFFRGVLEEL 319

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP----- 102
           LWF+ G ++   L    V IWD                ++G+LGP+YG QWR +      
Sbjct: 320 LWFVGGKTDAKLLTEKSVHIWDGNGSRAFLDSRGLSHRREGDLGPVYGFQWRHFGATYKD 379

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--- 156
              DY G  +DQ++S++  +R +P  RR ++SAWN A ++ MALPPCH   QF+V N   
Sbjct: 380 CDTDYAGQGVDQLASVIDKIRNNPTDRRILLSAWNPADLELMALPPCHMFAQFFVSNLDA 439

Query: 157 -------GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
                    LSCQ+YQRS D+ LG+PFNIASY+LLT M+A V   +  E I  +GD H+Y
Sbjct: 440 YSKGQGKKHLSCQMYQRSCDLGLGVPFNIASYALLTYMIAKVTDCEPKELILAMGDAHVY 499

Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +H +    QL R P   P++ I  ++ D+  F ++DF ++ Y+ H  I  K+SV
Sbjct: 500 KDHVQPLKAQLERDPLPFPKLKIERDVKDIDDFTFDDFVVQGYKCHGKIDMKMSV 554


>gi|38640245|ref|NP_944201.1| dTMP synthase [Aeromonas phage Aeh1]
 gi|33414930|gb|AAQ17973.1| dTMP synthase [Aeromonas phage Aeh1]
          Length = 277

 Score =  294 bits (754), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 121/282 (42%), Positives = 165/282 (58%), Gaps = 23/282 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YLD++ +  + G D  DRTGVGTRS  G   R D++ GFP +TTK + WK+V  E L
Sbjct: 1   MKAYLDIINYTFENGEDEMDRTGVGTRSVLGQVFRHDMADGFPAVTTKTLAWKAVRGECL 60

Query: 61  WFLRGDSNVSYLHR--HGV-----SIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WF+ G +NV  L    +GV     +IWD+  +         DGELGP+YG QWR +    
Sbjct: 61  WFMNGFTNVEVLRAMTYGVGSSSKTIWDDNFNHQGVALGYTDGELGPVYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
            N +DQ++  ++ ++ +P  RR+IV AWN   +DKMALPPCH LF+F V  G+L+   YQ
Sbjct: 117 -NGVDQLAKAIERIKTNPECRRNIVCAWNPVDLDKMALPPCHVLFRFSVKRGRLNLTWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D FLG+PFNIASY LL  ++A + G++ G     L D H+Y+NHFEQ   QL R P 
Sbjct: 176 RSVDTFLGLPFNIASYGLLLEIVAQITGYKAGILTGMLDDTHIYHNHFEQVQEQLQREPH 235

Query: 226 TLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264
            LP +        L        +D  L  Y+ H+AI A ++V
Sbjct: 236 KLPTLKFKNRFTTLEEACNLSVDDIELEDYKCHSAIKAPMAV 277


>gi|1480449|gb|AAC47229.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Cryptosporidium parvum]
          Length = 499

 Score =  294 bits (753), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 120/261 (45%), Positives = 166/261 (63%), Gaps = 21/261 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYLDLL  V++ G+ R +RTG+ T S FG  MRFD+ + FPLLTTKKV  +S+  EL+WF
Sbjct: 239 QYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEELIWF 298

Query: 63  LRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP-------- 102
           ++GD+N ++L    V IW                 ++ +LGPIYG QWR +         
Sbjct: 299 IKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKTMHD 358

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-LSC 161
           DY G  +DQ++ ++++L+ +P  RRHI++AWN + + +MALPPCH L Q+YV N   LSC
Sbjct: 359 DYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNCLSC 418

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            LYQRS D+ LG PFNIASY++LTMMLA V G++ GE    +GD H+Y NH  Q   QLS
Sbjct: 419 NLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKEQLS 478

Query: 222 RSPRTLPQMIINPNIVDLLSF 242
           R+PR  PQ+     + ++  F
Sbjct: 479 RTPRPFPQLKFKRKVENIEDF 499


>gi|311993229|ref|YP_004010095.1| dTMP thymidylate synthase [Enterobacteria phage CC31]
 gi|284178067|gb|ADB81733.1| dTMP thymidylate synthase [Enterobacteria phage CC31]
          Length = 348

 Score =  293 bits (751), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 121/288 (42%), Positives = 167/288 (57%), Gaps = 32/288 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L++H+   G    DRTG GT + FG Q+RFDL +GFP +TTKK+ WK+ + ELL
Sbjct: 1   MKQYQQLIQHIFDEGYVTDDRTGTGTCAVFGTQLRFDLQEGFPAVTTKKLAWKACIAELL 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L         +G ++WD+  +         DGELGP+YG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLRQHGSPTNGKTVWDDNYENQARSMGYVDGELGPVYGKQWRDFM--- 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ++ ++  ++  P  RR IV+AWN   I KMALPPCH ++QF V NG L  Q YQ
Sbjct: 118 --GVDQLTLVINRIKELPNDRRQIVTAWNPLDIPKMALPPCHMIYQFNVRNGLLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A + G + G  + T G+ H+Y+NH EQ +  L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALIHIVAKMTGLKPGHLVFTGGNTHIYSNHIEQCEEILRREPK 235

Query: 226 TLPQMIIN-----------PNIVDLLSF-RYEDFTLRSYEPHAAILAK 261
            L  + I+             +  +  F   EDF L +YE H  I  K
Sbjct: 236 ELCNLEIDFPIEFERWQTSSQLKWINRFAVIEDFKLVNYESHPTIKGK 283


>gi|304373617|ref|YP_003858362.1| Td thymidylate synthetase [Enterobacteria phage RB16]
 gi|299829573|gb|ADJ55366.1| Td thymidylate synthetase [Enterobacteria phage RB16]
          Length = 284

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 128/285 (44%), Positives = 172/285 (60%), Gaps = 22/285 (7%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++  V+  G++  DRTGVGT   FG Q R++L++GFP  T+K++ +K   HEL 
Sbjct: 1   MKQYLDIVNTVLTHGTESTDRTGVGTLRIFGMQARWNLAEGFPATTSKQLFFKPCKHELQ 60

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WFL G +NV  L +          +IWD+  +          G LGPIYG QWRS+    
Sbjct: 61  WFLEGSTNVETLRKMTWGEDSDKRTIWDDNYENQAKALGYTHGYLGPIYGHQWRSFGAEG 120

Query: 106 G-NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
             + +DQI+ IV+ L+  P  R  IVSAWN   +D MAL PCHC FQF V NGKLS Q Y
Sbjct: 121 SFSGVDQIARIVKELKEKPDDRGIIVSAWNPVDLDDMALRPCHCFFQFVVINGKLSLQWY 180

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SR 222
           QRS DVFLG+PFNIASY+LLT ++A + G++ G+ + T GDVH+Y N  EQA   L   R
Sbjct: 181 QRSVDVFLGLPFNIASYALLTHIIADICGYEVGDLVWTGGDVHIYKNAVEQAKELLKPER 240

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFT---LRSYEPHAAILAKVSV 264
           +P  LP + + P +  LL    E F    L+ Y  H ++ A ++V
Sbjct: 241 APLPLPTLYM-PKVNSLLDLDQEFFDSIHLKDYNHHGSLKAAMAV 284


>gi|85089414|ref|XP_957941.1| thymidylate synthase [Neurospora crassa OR74A]
 gi|28919227|gb|EAA28705.1| thymidylate synthase [Neurospora crassa OR74A]
          Length = 368

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 127/337 (37%), Positives = 167/337 (49%), Gaps = 74/337 (21%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------------- 41
           +QYLDL+R ++  G  R DRTG GT S F    ++F LS+                    
Sbjct: 32  YQYLDLVRQILDEGELREDRTGTGTYSIFAPTPLKFALSRPSSSSPSSGSSSDPSSPDYT 91

Query: 42  ----FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------AD 85
                PLLTTK+V  K+V+ ELLWF+   ++ + L   GV IWD                
Sbjct: 92  YTPILPLLTTKRVFTKAVLLELLWFISASTSSTTLSAQGVKIWDGNGSRAFLDMLGLSHR 151

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           K+G+LGP+YG QWR +         DY G  +DQ+  I+ +LR +PY RR I+SAWN   
Sbjct: 152 KEGDLGPVYGFQWRHFGAEYVDCETDYTGQGVDQLQRIIDTLRNNPYDRRLILSAWNPKD 211

Query: 138 IDKMALPPCHCLFQFYVD-----------------------------NGKLSCQLYQRSG 168
           + +M LPPCH   QFYV                               G L CQLYQRS 
Sbjct: 212 MSQMVLPPCHMFAQFYVSYPGSRTRGGATQTQNKEGELDTPPKEKKPRGHLHCQLYQRSC 271

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+ LG+PFNIASY+LLT MLA V     G   H +GD H+Y NH +    QL R PR  P
Sbjct: 272 DMGLGVPFNIASYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQLEREPREFP 331

Query: 229 QMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            + I       +  ++ EDF ++ YEPH  I  ++SV
Sbjct: 332 TLEIQREKGGSIDGWKAEDFVIKGYEPHKTIAMEMSV 368


>gi|326387810|ref|ZP_08209416.1| thymidylate synthase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207856|gb|EGD58667.1| thymidylate synthase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 315

 Score =  291 bits (745), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 123/305 (40%), Positives = 166/305 (54%), Gaps = 42/305 (13%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDL+  +   G +R DRTGVGTRS FG  +RFDLS G  PLLTTK+++WK+   E L
Sbjct: 11  QQYLDLMARIWSHGDERIDRTGVGTRSIFGTTLRFDLSDGQVPLLTTKRIYWKTATREFL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWA----------------------------DKDGELGP 92
           WFL G++N+  L   GV IW +W                              + GELGP
Sbjct: 71  WFLTGETNIRPLCAQGVEIWTDWPLDRYRRETGDRMTREDFSRRIVEDADFAARWGELGP 130

Query: 93  IYGVQWRSWPDYD-------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           +YG QW  WP Y+                I+Q++ +V+ LR +P  RRHIV  WNVA +D
Sbjct: 131 VYGKQWTDWPVYEADAAAGAGLFRRRERGINQVAELVEGLRRNPGGRRHIVEGWNVAELD 190

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
            MALPPCH  +QF+V +G+LS  +YQRS DV LG+PFN+   +L   MLA       GE 
Sbjct: 191 AMALPPCHKTYQFHVADGRLSGIVYQRSCDVALGLPFNLWGGALFIHMLAQQCDLLPGEL 250

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           +   GD HLY NH +  + QL+R P   P++++      +  +   DFT+  Y P   + 
Sbjct: 251 VWMGGDTHLYLNHGDLVEAQLARQPAGSPRLVLGRRPASIFDYEIGDFTVLDYHPQKHLA 310

Query: 260 AKVSV 264
           A V+V
Sbjct: 311 APVAV 315


>gi|171678407|ref|XP_001904153.1| hypothetical protein [Podospora anserina S mat+]
 gi|170937273|emb|CAP61930.1| unnamed protein product [Podospora anserina S mat+]
          Length = 303

 Score =  291 bits (745), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 115/285 (40%), Positives = 154/285 (54%), Gaps = 41/285 (14%)

Query: 21  RTGVGTRSTFGY-QMRFDLSKGF-----PLLTTKKVHWKSVVHELLWFLRGDSNVSYLHR 74
           RTG GT S F    ++F LS        PLLTTK+V  ++++ ELLWF+ G ++   L  
Sbjct: 19  RTGTGTYSLFAPSPLKFSLSTPTGTPLLPLLTTKRVFTRAIILELLWFISGSTSSLPLSS 78

Query: 75  HGVSIWDEW------------ADKDGELGPIYGVQWRSWP--------DYDGNVIDQISS 114
             V IWD                ++G+LGP+YG QWR +         DY G  +DQ++ 
Sbjct: 79  QNVKIWDGNGSRAFLDSLGLTHREEGDLGPVYGFQWRHFGAEYVDSKTDYTGQGVDQLAR 138

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--------------NGKLS 160
           IVQ+L+ +PY RR I+SAWN   + +M LPPCH   QFYV                G L 
Sbjct: 139 IVQTLKTNPYDRRLILSAWNPKDMSQMVLPPCHMFAQFYVSYPRSRKETEEGREVKGHLH 198

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           CQLYQRS D+ LG+PFNIASY+LLT MLA V     G   H +GD H+Y NH +    QL
Sbjct: 199 CQLYQRSCDMGLGVPFNIASYALLTHMLAHVCDLVPGSLTHVMGDAHVYLNHVDALKTQL 258

Query: 221 SRSPRTLPQMIINPNI-VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            R PR  P++ I       +  ++ EDF ++ Y PH  I  ++SV
Sbjct: 259 EREPREFPELEIKREKGGSIDGWKLEDFEIKGYNPHKVISMEMSV 303


>gi|228861545|ref|YP_002854566.1| thymidylate synthetase [Enterobacteria phage RB14]
 gi|32709463|gb|AAP86750.1| thymidylate synthase [Enterobacteria phage RB14]
 gi|227438561|gb|ACP30874.1| thymidylate synthetase [Enterobacteria phage RB14]
          Length = 286

 Score =  291 bits (745), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 121/291 (41%), Positives = 170/291 (58%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELL 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WF+ G +NV+ L          G +IWD+  +          GELGPIYG QWR +    
Sbjct: 61  WFISGSTNVNDLRLRTHGSLIQGKTIWDDNYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ+   +  ++  P  RR IVSAWN A I++MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQLVETIDRIKKLPTDRRQIVSAWNPAEINQMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ LT ++A +     G+ I + G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLIFSGGNTHIYMNHTEQCKEILRREPK 235

Query: 226 TLPQMIINPNIVD-----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264
            L ++ I+  I             L  + + +DF L +YE H AI  K+++
Sbjct: 236 ELCELKIDWPIEFGNCDTETQLYWLTEYMKPKDFILENYESHPAIKGKMAI 286


>gi|32709477|gb|AAP86757.1| thymidylate synthase [Enterobacteria phage U5]
          Length = 286

 Score =  291 bits (745), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 120/291 (41%), Positives = 169/291 (58%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELL 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WF+ G +NV+ L          G +IWD+  +          GELGPIYG QWR +    
Sbjct: 61  WFISGSTNVNDLRLRTHGSLIQGKTIWDDNYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ+   +  ++  P  RR IVSAWN A I++MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQLVETIDRIKKLPTDRRQIVSAWNPAEINQMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ LT ++A +     G+ I + G+ H+Y NH  Q    L R P+
Sbjct: 176 RSVDVFLGLPFNIASYAALTHIVAKMCNLIPGDLIFSGGNTHIYMNHTAQCKEILRREPK 235

Query: 226 TLPQMIINPNIVD-----------LLSF-RYEDFTLRSYEPHAAILAKVSV 264
            L ++ I+  I             L  + + +DF L +YE H AI  K+++
Sbjct: 236 ELCELKIDWPIEFGNCDTETQLYWLTEYMKPKDFILENYESHPAIKGKMAI 286


>gi|330858750|ref|YP_004415125.1| putative thymidylate synthase [Shigella phage Shfl2]
 gi|327397684|gb|AEA73186.1| putative thymidylate synthase [Shigella phage Shfl2]
          Length = 286

 Score =  291 bits (744), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 120/291 (41%), Positives = 167/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + ELL
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACISELL 60

Query: 61  WFLRGDSNVSYLHRH-------GVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L +        G +IWDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRQRTHGSLIAGKTIWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  +V  ++  P  RR IVSAWN   + +MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIVEVVNRIKTFPNDRRQIVSAWNPVELKQMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ + + G+ H+Y+NH EQ    L+R+P 
Sbjct: 176 RSVDVFLGLPFNIASYAALLHIVADMCELVPGDLVFSGGNTHIYSNHIEQCKEILNRTPM 235

Query: 226 TLPQMIIN-PNIVDLLS-----------FRYEDFTLRSYEPHAAILAKVSV 264
            L ++ IN PN                     DF L+ Y+ H  +  K++V
Sbjct: 236 DLCKLSINWPNGFSQCDTETQMYWLTEYMTARDFVLKDYQSHGVLKGKMAV 286


>gi|15896255|ref|NP_349604.1| thymidylate synthase [Clostridium acetobutylicum ATCC 824]
 gi|25091479|sp|Q97EV3|TYSY_CLOAB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|15026060|gb|AAK80944.1|AE007797_6 Thymidylate synthase [Clostridium acetobutylicum ATCC 824]
 gi|325510410|gb|ADZ22046.1| thymidylate synthase [Clostridium acetobutylicum EA 2018]
          Length = 263

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 105/266 (39%), Positives = 154/266 (57%), Gaps = 11/266 (4%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            +YLD++ ++++ G    +RTG+ T       M+FDLSK FP+LTTK V +K+ V ELLW
Sbjct: 6   EKYLDIIENILENGYYDNNRTGIETYKLPHQIMQFDLSKEFPILTTKFVAFKTSVKELLW 65

Query: 62  FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
             +  SN V  L    V+IWDEW  +DG +G  YG Q   +         QI +++ +L+
Sbjct: 66  IYKDQSNDVRKLQNENVTIWDEWMLEDGTIGKAYGYQVAKFK--------QIDNLIDTLK 117

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR ++S WN+A +  M+L PC     + V NGKL+C L QRSGD+ LG+PFN+  
Sbjct: 118 TDPQSRRMLISLWNIADLKDMSLTPCCYETLWDVQNGKLNCMLVQRSGDMPLGVPFNMCQ 177

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVD 238
           Y++L  ++A V G + G F H + + H+Y N  E   +QL R       P++ INPNI +
Sbjct: 178 YAVLVHLIAQVTGLKPGLFTHVINNAHIYKNQIEGMKIQLKRRDKAYEAPKLWINPNIKN 237

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
              F  +D  L  Y+ H  I  +V+V
Sbjct: 238 FYDFTADDIKLIDYKHHDKIKMEVAV 263


>gi|116326450|ref|YP_803170.1| thymidylate synthetase [Enterobacteria phage RB32]
 gi|32709461|gb|AAP86749.1| thymidylate synthase [Enterobacteria phage RB32]
 gi|115344043|gb|ABI95052.1| thymidylate synthetase [Enterobacteria phage RB32]
          Length = 286

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 119/291 (40%), Positives = 166/291 (57%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIVEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P 
Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235

Query: 226 TLPQMIIN-PNIVDLLS-----------FRYEDFTLRSYEPHAAILAKVSV 264
            L ++ +  P+  D               +  +F L +YE H +I  K++V
Sbjct: 236 DLCELQLKFPDEFDEWDTESQVFWLSQFVKPHNFVLNNYESHPSIKGKMAV 286


>gi|307293290|ref|ZP_07573136.1| thymidylate synthase [Sphingobium chlorophenolicum L-1]
 gi|306881356|gb|EFN12572.1| thymidylate synthase [Sphingobium chlorophenolicum L-1]
          Length = 296

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 118/296 (39%), Positives = 164/296 (55%), Gaps = 39/296 (13%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGD 66
           +RH+ + G +R DRTGVGTRS  G  MRF L+    PLLTTK+V+WK    E+LWFL GD
Sbjct: 1   MRHIWRHGDERIDRTGVGTRSILGATMRFSLADDAVPLLTTKRVYWKVAAREMLWFLTGD 60

Query: 67  SNVSYLHRHGVSIWDEWA----------------------------DKDGELGPIYGVQW 98
           +N+  L R GV IW +W                              + G+LGP+YG QW
Sbjct: 61  TNIRELVRQGVHIWTDWPLDAYRRATGEDIDRDAFEARIVEDEAFAARWGDLGPVYGAQW 120

Query: 99  RSWPDYDG----------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
            +WP Y+              +QI+ +V+ +R +P SRR + + WNVA + +M+LPPCH 
Sbjct: 121 VNWPRYEAVGDGLYRKAAQGHNQIADLVEGIRNNPGSRRLLFTGWNVAEVSRMSLPPCHM 180

Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
            +QF V +G+L+  L+QRS D+ LG  FNI   S++T MLA     + GE +   GDVHL
Sbjct: 181 TYQFQVADGRLNGLLFQRSCDLGLGFAFNIFGLSMITRMLAQQCDLKPGEVVWQGGDVHL 240

Query: 209 YNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Y NH E  + Q+ R+P   P++ IN     +  +R EDF +  Y P   I A V+V
Sbjct: 241 YLNHAELVEEQIGRNPSGAPKLRINRRPSSIFDYRIEDFEVVDYAPQRHIAAPVAV 296


>gi|228861163|ref|YP_002854186.1| thymidylate synthetase [Enterobacteria phage RB51]
 gi|32709467|gb|AAP86752.1| thymidylate synthase [Enterobacteria phage RB61]
 gi|227438837|gb|ACP31149.1| thymidylate synthetase [Enterobacteria phage RB51]
          Length = 286

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 117/292 (40%), Positives = 163/292 (55%), Gaps = 34/292 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ W + + EL+
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWNACIAELI 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  ++  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P 
Sbjct: 176 RSVDVFLGLPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILCREPM 235

Query: 226 TLPQMIINPNIVDLLSFRYE-------------DFTLRSYEPHAAILAKVSV 264
            L ++ +     +   +  E             +F L +YE H  I  K++V
Sbjct: 236 DLCELQLKF-PDEFDEWDTESQVFWLSQFAKPHNFVLNNYESHPPIKGKMAV 286


>gi|32709469|gb|AAP86753.1| thymidylate synthase [Enterobacteria phage RB23]
          Length = 286

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 116/292 (39%), Positives = 163/292 (55%), Gaps = 34/292 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY  L++ +++ G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+
Sbjct: 1   MKQYQFLIKDILENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  ++  ++  P  RR IVSAWN A + +MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIIEVIDRIKKLPNDRRQIVSAWNPAELKQMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  ++A +     G+ I + G+ H+Y NH EQ    L R P 
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIVAKICNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235

Query: 226 TLPQMIINPNIVDLLSFRYE-------------DFTLRSYEPHAAILAKVSV 264
            L ++ +     +   +  E             +F L  Y  H  I  K++V
Sbjct: 236 DLCELQLKF-PDEFDEWDTESQVFWLSQFAKPHNFVLNDYVSHPPIKGKMAV 286


>gi|260889012|ref|ZP_05900275.1| thymidylate synthase [Leptotrichia hofstadii F0254]
 gi|260861072|gb|EEX75572.1| thymidylate synthase [Leptotrichia hofstadii F0254]
          Length = 289

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 121/292 (41%), Positives = 166/292 (56%), Gaps = 31/292 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++++V+  G  + +RTGV T STF Y  + DLS+G+PLLTTKK+++ S++HEL 
Sbjct: 1   MKQYLDMVKYVLDNGIKKENRTGVDTISTFAYSYKVDLSEGYPLLTTKKMYFNSMLHELF 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP------------------ 102
           W+L G+ ++  L +    IWD WAD++G L   YG  WR +P                  
Sbjct: 61  WYLSGEEHIKNLRKK-TKIWDAWADEEGRLETAYGRFWRRYPVPEISLDGEVFADENNPW 119

Query: 103 ---DYDGNVI-DQISSIVQSLR------ADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
              + +G ++ DQI  I+ +L+           RR IV AWN        LPPCH  F F
Sbjct: 120 VTREKNGQLVFDQIQYIIDTLKEMKTNPNHKNGRRMIVLAWNPGNATISKLPPCHYTFAF 179

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            V   KL+C L QRSGD+ LGIPFN+A YSLLTMM+A   G++ GEF HT+ D H+Y NH
Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEAGEFAHTIIDAHIYENH 239

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL+R P  LP++ I           +ED +L  YE H  I  +V+V
Sbjct: 240 IEGLKEQLTREPLKLPKIKIADKP--FNELTFEDISLEDYESHPVIKFEVAV 289


>gi|187935542|ref|YP_001887622.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B]
 gi|187723695|gb|ACD24916.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B]
          Length = 263

 Score =  287 bits (734), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 100/265 (37%), Positives = 148/265 (55%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL++ ++++  G    +RTG+ T       M+F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V IWDEW  +DG +G  YG   + +        DQI  ++ SL+ 
Sbjct: 67  FKDQSNDVKKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIHSLKN 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ W +  +D  AL PC  L  + V +G+L+C L QRSGD  LGIPFN + Y
Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGRLNCMLVQRSGDWPLGIPFNTSQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239
           ++LT ++A V G + G F H + + H+Y N  +    QL R       P++ INP I D 
Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVINNAHIYENQIDGMKTQLERKDQSYDAPKLWINPEIKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L +Y+ H +I   VSV
Sbjct: 239 YDFTPDDIKLENYKHHESIKMPVSV 263


>gi|330723643|gb|AEC46013.1| thymidylate synthase [Mycoplasma hyorhinis MCLD]
          Length = 270

 Score =  287 bits (734), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 133/273 (48%), Positives = 179/273 (65%), Gaps = 34/273 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+ LRH+++ G  + +RT V + +TFGYQMRFDLS+GFPL+TTKK ++ S+ HELL
Sbjct: 1   MRQYLEFLRHILQKGIKKTNRTIVDSINTFGYQMRFDLSEGFPLVTTKKTNFASIAHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD-----------------------------GELG 91
           WF++GD+N+ YL  + V+IW+EW  ++                             GELG
Sbjct: 61  WFIKGDTNIKYLVDNNVNIWNEWPYENYKKSKEFQGESLKEFIVKIKENPSFAKQFGELG 120

Query: 92  PIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
           P+YG QWR++       +DQ+  ++Q ++ +P SRR IVSAWN   ID M LPPCH LFQ
Sbjct: 121 PVYGKQWRNFL-----GVDQLKKVIQEIKTNPNSRRLIVSAWNPLEIDSMLLPPCHSLFQ 175

Query: 152 FYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           FYV N KLSCQLYQRS D FLG+PFNIASYSLL  M+A     + GEFIHT+GD H+Y N
Sbjct: 176 FYVANNKLSCQLYQRSADAFLGVPFNIASYSLLVFMIAQECELEVGEFIHTIGDAHIYVN 235

Query: 212 HFEQADLQLSRSPRTLPQMIINPNIVDLLSFRY 244
           H +Q +LQL+R P  LP++ I  N+  + + + 
Sbjct: 236 HIDQVNLQLTRIPHKLPKLKITKNLFLIFNLKI 268


>gi|32709479|gb|AAP86758.1| thymidylate synthase [Enterobacteria phage T6]
 gi|113952002|gb|ABI48939.1| Td [Enterobacteria phage T6]
          Length = 286

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 118/292 (40%), Positives = 162/292 (55%), Gaps = 34/292 (11%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ + + G +  DRTG GT + FG ++R+DL+KGFP +TTKK+ WK+ + EL+
Sbjct: 1   MKQYQDLIKDIFENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELI 60

Query: 61  WFLRGDSNVSYLH-------RHGVSIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +NV+ L          G ++WDE  +          GELGPIYG QWR +    
Sbjct: 61  WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLGYHSGELGPIYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQI  +V  ++  P  RR IVSAWN A +  MALPPCH  +QF V NG L  Q YQ
Sbjct: 117 -GGVDQIIEVVDRIKKLPNDRRQIVSAWNPAELKYMALPPCHMFYQFNVRNGYLDLQWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PFNIASY+ L  + A +     G+ I + G+ H+Y NH EQ    L R P 
Sbjct: 176 RSVDVFLGLPFNIASYAALVHIAAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPM 235

Query: 226 TLPQMIINPNIVDLLSFRYE-------------DFTLRSYEPHAAILAKVSV 264
            L ++ +     +   +  E             +F L +Y  H  I  K++V
Sbjct: 236 DLCELQLKF-PDEFDEWNTESQVFWLSQFAKPHNFVLNNYVSHPPIKGKMAV 286


>gi|251781262|ref|ZP_04824178.1| thymidylate synthase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243081709|gb|EES47770.1| thymidylate synthase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 263

 Score =  286 bits (732), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 100/265 (37%), Positives = 147/265 (55%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL++ ++++  G    +RTG+ T       M+F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V IWDEW  +DG +G  YG   + +        DQI  ++ SL+ 
Sbjct: 67  FKDQSNDVKKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIDSLKN 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ W +  +D  AL PC  L  + V +GKL+C L QRSGD  LGIPFN + Y
Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGKLNCMLVQRSGDWPLGIPFNTSQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDL 239
           ++LT ++A V G + G F H + + H+Y N  +    QL R       P++ INP I D 
Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVINNAHIYENQIDGMKTQLERKDQAYDAPKLWINPEIKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L  Y+ H +I   VS+
Sbjct: 239 YDFTPDDIKLEDYKHHESIKMPVSI 263


>gi|302309826|ref|XP_448463.2| hypothetical protein [Candida glabrata CBS 138]
 gi|196049169|emb|CAG61424.2| unnamed protein product [Candida glabrata]
          Length = 256

 Score =  285 bits (730), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 112/288 (38%), Positives = 147/288 (51%), Gaps = 65/288 (22%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL   +IK G  R DRTG G                                    
Sbjct: 9   KQYLDLCERIIKEGEFRPDRTGTGC----------------------------------- 33

Query: 62  FLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------- 102
                ++   L   GV IW+                ++G+LGP+YG QWR +        
Sbjct: 34  -----TDAKKLSDQGVKIWEGNGSREYLDKMGFVDRREGDLGPVYGFQWRHFGAEYKTCE 88

Query: 103 -DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK--- 158
            DY G  +DQ+  ++  L+ +PY RR I+SAWN     KMALPPCH   QFYV+  K   
Sbjct: 89  DDYTGQGVDQLKEVIHKLKTNPYDRRIIMSAWNPPDFPKMALPPCHVFSQFYVNFPKDGK 148

Query: 159 --LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
             LSC LYQRS D+ LG+PFNIASY+LLT M+A V   + GEFIHTLGD H+Y +H +  
Sbjct: 149 PQLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVCDMEPGEFIHTLGDAHVYKDHVDAL 208

Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             Q+SR+PR  P++ IN  + D+  F++EDF L  Y+PH  I   +SV
Sbjct: 209 KEQISRTPRDFPKLRINRKVSDIDDFKFEDFVLEEYDPHPRIQMNMSV 256


>gi|188590339|ref|YP_001922592.1| thymidylate synthase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500620|gb|ACD53756.1| thymidylate synthase [Clostridium botulinum E3 str. Alaska E43]
          Length = 263

 Score =  285 bits (730), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 100/265 (37%), Positives = 148/265 (55%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL++ ++++  G    +RTG+ T       M+F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   KYLEIAKNILDNGYYDNNRTGMPTYKIPHQVMQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V IWDEW  +DG +G  YG   + +        DQI  ++ SL+ 
Sbjct: 67  FKDQSNDVRKLQEQNVHIWDEWEMEDGTIGTSYGWVVKKF--------DQIDKLIYSLKN 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ W +  +D  AL PC  L  + V +G+L+C L QRSGD  LGIPFN + Y
Sbjct: 119 NPQDRRMMLNLWQIPYLDGGALCPCCFLTMWDVTDGRLNCMLVQRSGDWPLGIPFNTSQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDL 239
           ++LT ++A V G + G F H + + H+Y N  +    QL R       P++ INP I D 
Sbjct: 179 AVLTHLIAQVTGLKPGLFTHVVNNAHIYENQIDGMKTQLERKDQAYDAPKLWINPEIKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L +Y+ H +I   VSV
Sbjct: 239 YDFTPDDIKLENYKHHESIKMPVSV 263


>gi|148927741|ref|ZP_01811178.1| Thymidylate synthase [candidate division TM7 genomosp. GTL1]
 gi|147886915|gb|EDK72448.1| Thymidylate synthase [candidate division TM7 genomosp. GTL1]
          Length = 280

 Score =  285 bits (730), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 114/269 (42%), Positives = 163/269 (60%), Gaps = 11/269 (4%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QYL L+  ++K G  +  R   G ++ FGYQ+RFD+ +GFPLLTTKK+ +K ++HEL W
Sbjct: 6   YQYLQLMADILKDGRSKPSRGIHGLKAIFGYQIRFDMRQGFPLLTTKKMPFKILLHELFW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK-DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           F+ G S+V YLH H +  WD +  +   +LG +YGVQWR W   DG+  DQ+   ++ ++
Sbjct: 66  FISGSSSVDYLHEHKIHYWDGFLHEGSDDLGRVYGVQWRHWLRPDGSQFDQLQWAIEQIK 125

Query: 121 ADPYSRRHIVSAWN----------VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
            +P S+  IVSAWN                M LPPCH +FQF V  GKL  QLYQRS DV
Sbjct: 126 TNPNSKAIIVSAWNAGELGDKRWNPNDYGDMRLPPCHTMFQFDVTGGKLRMQLYQRSSDV 185

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
           FLG+PFNIA Y++L  M+A +   +  E I ++G  HLY N  E A  Q+ R P   P++
Sbjct: 186 FLGLPFNIAQYAMLLHMVAYLADLEPRELIISIGSAHLYRNQIEPAKEQVRRKPYRFPKL 245

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
            I  ++ D+  F+ ++F+L  Y+ H  I 
Sbjct: 246 TIAGDVKDIDDFKEKNFSLEGYQSHPHIK 274


>gi|29337127|sp|Q9ANR7|TYSY_BACMO RecName: Full=Thymidylate synthase A; Short=TS A; Short=TSase A
 gi|12958589|gb|AAK09364.1|AF321518_1 thymidylate synthase [Bacillus mojavensis]
          Length = 279

 Score =  284 bits (728), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 102/275 (37%), Positives = 153/275 (55%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFG----------SDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ +IK G              D T   T S    QMRFD S+  P+LTTKKV 
Sbjct: 6   KQYNSIIKEIIKNGISDEEFDVRTKWESDGTPAHTLSIITKQMRFDNSE-VPILTTKKVA 64

Query: 52  WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-PDYDGNVI 109
           WK+ + ELLW  +   ++V+ L++ GV IWD+W  +DG +G  YG Q      + +G  +
Sbjct: 65  WKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGSIGHAYGFQLAKKNRNLNGEKV 124

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV  GKL  ++  RS D
Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQWYVKQGKLHLEVRARSND 184

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P+
Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPK 244

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP + D   F  +DF L +Y+    +  +V+V
Sbjct: 245 LWINPEVKDFYDFTIDDFKLINYKHGDRLSFEVAV 279


>gi|150019760|ref|YP_001312014.1| thymidylate synthase [Clostridium beijerinckii NCIMB 8052]
 gi|189036930|sp|A6M378|TYSY_CLOB8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|149906225|gb|ABR37058.1| Thymidylate synthase [Clostridium beijerinckii NCIMB 8052]
          Length = 263

 Score =  284 bits (727), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 99/265 (37%), Positives = 145/265 (54%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL +   +++ G    +RTGV T       M+F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   KYLAIANDILENGYFDNNRTGVKTYKLPHQIMQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V IWDEW  +DG +G  YG   + +        DQI  ++ +L+ 
Sbjct: 67  FKDQSNSVKELQSQNVKIWDEWMMEDGTIGTSYGWIVKKF--------DQIDKLIDALKN 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ W +  +D   L PC  L  + V +GKL+C L QRSGD  LG+PFN + Y
Sbjct: 119 NPQDRRMMINLWQIPYLDSAPLYPCCFLTMWDVTDGKLNCMLVQRSGDWGLGVPFNTSQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239
           ++L  +LA V G + G F H + + H+Y N  +   LQL+R       P++ INP I + 
Sbjct: 179 AVLVHLLAQVTGLKPGLFTHVINNAHIYENQVDGLKLQLTRKNDAYNAPKLWINPEITNF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L  Y+ H +I   VSV
Sbjct: 239 YDFTPDDIKLEDYKHHESIKMDVSV 263


>gi|308814595|ref|YP_003934869.1| thymidylate synthase [Shigella phage SP18]
 gi|308206187|gb|ADO19586.1| thymidylate synthase [Shigella phage SP18]
          Length = 286

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL++ V   G    DRTG GT +TFG ++ +D+S+GFP  T K++ +KSVV ELL
Sbjct: 1   MKNYQDLIQTVFDIGYQTDDRTGTGTIATFGTKVEWDMSEGFPATTVKRLAYKSVVGELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WFL G +NV  L            +IWD+  +         DGELGP+YG QWR +    
Sbjct: 61  WFLEGSTNVERLREITHGAGSDKKTIWDQNFEAQGRALGYVDGELGPVYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ+   ++ ++  P  RR IVSAWN A + +MALPPCH L+QF V +G+L    YQ
Sbjct: 117 -GGVDQLVETIEKVKKVPTDRRQIVSAWNPAELKQMALPPCHLLYQFNVHDGELDLLWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PF+I SY  L  ++A + G + G+ +   G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFDIGSYGTLLHIVAKMTGLKPGKLVFMGGNTHIYLNHIEQCKEVLRREPK 235

Query: 226 TLPQMIIN-PNIVDLLSFRY-----------EDFTLRSYEPHAAILAKVSV 264
           TLP + IN P    L                 DF L +YEPH  I A ++V
Sbjct: 236 TLPTLKINWPEQFHLWDTEMQLYWVTRHMSPADFVLENYEPHPTIAAPMAV 286


>gi|313892946|ref|ZP_07826523.1| thymidylate synthase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442299|gb|EFR60714.1| thymidylate synthase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 263

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 104/265 (39%), Positives = 153/265 (57%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ ++++ G+  ++RTGV T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILEHGTYGQNRTGVATYKLPHQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+ +++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVRVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  +D MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVADGHLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239
           + L  M+A V G + G+F H + + H+Y NH E    QL+R       P++I+NP + D 
Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHVYENHVEALREQLARRDQALPAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V+V
Sbjct: 239 YDFTPEDVTLDGYEHLGKLSMTVAV 263


>gi|46401828|ref|YP_006920.1| putative thymidylate synthase [Enterobacteria phage T5]
 gi|45775006|gb|AAS77138.1| putative thymidylate synthase [Enterobacteria phage T5]
 gi|51512030|gb|AAU05229.1| thymidylate synthase [Enterobacteria phage T5]
 gi|59897229|gb|AAX12024.1| thymidylate synthase [Enterobacteria phage T5]
          Length = 279

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 130/285 (45%), Positives = 171/285 (60%), Gaps = 29/285 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL +L  VI  G  R DRTG GT S F    +FDL +GFP +TTK++ WKSVV ELL
Sbjct: 1   MQQYLKILTDVILLGEPRNDRTGTGTVSIFDSYAKFDLREGFPAVTTKRLAWKSVVGELL 60

Query: 61  WFLRGDSNVSYLHRHGV-------SIWDEWADKD--------GELGPIYGVQWRSWPDYD 105
           WFL G +N+  L            +IW    +          G LGP+YG QWR++    
Sbjct: 61  WFLSGSTNLHDLRVFTFGRDEGQWTIWTPNYEDQAISMGYDKGNLGPVYGKQWRNF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLY 164
               DQI  +++ L+ +P+ RRH+VSAWNVA +DKMALPPCH  FQ YV ++G L  +  
Sbjct: 117 -GGRDQILELIEGLKNNPHGRRHLVSAWNVAELDKMALPPCHYGFQCYVSNDGYLDLKWT 175

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS D FLG+PFNIASY+LLT +LA + G +    I + GD H+YN+H EQ + Q+ R P
Sbjct: 176 QRSVDCFLGLPFNIASYALLTHILAKLTGLKPRYLIFSGGDTHIYNDHMEQVEEQVKRKP 235

Query: 225 RTLPQMIINPNIVDLLSFRYED------FTLRSYEPHAAILAKVS 263
           R LP +++ P  VDL     E+      F L  Y+PH A+ AK+S
Sbjct: 236 RPLPTLVM-PEFVDLYDL-LENNTAAWSFHLEGYDPHPALKAKMS 278


>gi|4388862|pdb|1BKO|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4388863|pdb|1BKO|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4388864|pdb|1BKO|C Chain C, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4388865|pdb|1BKO|D Chain D, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4388866|pdb|1BKP|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4388867|pdb|1BKP|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4389238|pdb|1BSF|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4389239|pdb|1BSF|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4558131|pdb|1BSP|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis
 gi|4558132|pdb|1BSP|B Chain B, Thermostable Thymidylate Synthase A From Bacillus Subtilis
          Length = 278

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 102/275 (37%), Positives = 152/275 (55%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ +I  G              D T   T S    QMRFD S+  P+LTTKKV 
Sbjct: 5   KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVA 63

Query: 52  WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY-DGNVI 109
           WK+ + ELLW  +   ++V+ L+  GV IWD+W  +DG +G  YG Q        +G  +
Sbjct: 64  WKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKV 123

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV +GKL  ++  RS D
Sbjct: 124 DQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSND 183

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P+
Sbjct: 184 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 243

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP + D   F  +DF L +Y+    +L +V+V
Sbjct: 244 LWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 278


>gi|16078831|ref|NP_389651.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309650|ref|ZP_03591497.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221313972|ref|ZP_03595777.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221318895|ref|ZP_03600189.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221323168|ref|ZP_03604462.1| thymidylate synthase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|317412154|sp|P0CI79|TYSY1_BACSU RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1;
           AltName: Full=Thymidylate synthase A; Short=TS A;
           Short=TSase A
 gi|4699624|pdb|1B02|A Chain A, Crystal Structure Of Thymidylate Synthase A From Bacillus
           Subtilis
 gi|607048|emb|CAA55307.1| thymidylate synthetase [Bacillus subtilis]
 gi|2634152|emb|CAB13652.1| thymidylate synthase A [Bacillus subtilis subsp. subtilis str. 168]
          Length = 279

 Score =  282 bits (723), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 102/275 (37%), Positives = 152/275 (55%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ +I  G              D T   T S    QMRFD S+  P+LTTKKV 
Sbjct: 6   KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVA 64

Query: 52  WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY-DGNVI 109
           WK+ + ELLW  +   ++V+ L+  GV IWD+W  +DG +G  YG Q        +G  +
Sbjct: 65  WKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKV 124

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV +GKL  ++  RS D
Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSND 184

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P+
Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 244

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP + D   F  +DF L +Y+    +L +V+V
Sbjct: 245 LWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 279


>gi|269120222|ref|YP_003308399.1| thymidylate synthase [Sebaldella termitidis ATCC 33386]
 gi|268614100|gb|ACZ08468.1| thymidylate synthase [Sebaldella termitidis ATCC 33386]
          Length = 289

 Score =  282 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 118/292 (40%), Positives = 159/292 (54%), Gaps = 31/292 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++++V++ G  + +RTGV T S F Y  R DLS+G+PLLTTKK+++ S++ EL 
Sbjct: 1   MKQYLDMVKYVLENGIKKENRTGVDTISNFAYFYRVDLSEGYPLLTTKKMYFNSMLKELF 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP----DYDGNVI------- 109
           W+L G+ ++  L +    IWD WAD++G L   YG  WR +P      DG V        
Sbjct: 61  WYLSGEEHIKNLRK-DTKIWDAWADEEGRLETAYGRFWRRYPVPETHLDGEVFADESSKW 119

Query: 110 -----------DQISSIVQSLR------ADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
                      DQI  ++ +L+           RR IV AWN        LPPCH  F F
Sbjct: 120 VTRESNGQLVFDQIGYVIDTLKEMKTNPNHKNGRRLIVLAWNPGNAAISKLPPCHYTFAF 179

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            V   KL+C L QRSGD+ LGIPFN+A YSLLTMM+A   G++ GEF HT+ D H+Y NH
Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEPGEFAHTIIDAHIYENH 239

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL R P  L ++ I           ++D  L  Y  H  I  +V+V
Sbjct: 240 IEGLKEQLKREPLKLSKIEIADKP--FDELTFDDVKLVDYVSHPLIKFEVAV 289


>gi|238018729|ref|ZP_04599155.1| hypothetical protein VEIDISOL_00573 [Veillonella dispar ATCC 17748]
 gi|237865200|gb|EEP66490.1| hypothetical protein VEIDISOL_00573 [Veillonella dispar ATCC 17748]
          Length = 263

 Score =  282 bits (722), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ ++++ G+  ++RTGV T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILEHGTYGQNRTGVATYKLPHQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+  ++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVRVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  +D MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVADGHLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239
           + L  M+A V G + G+F H + + H+Y NH E    QL+R  + L  P++I+NP + D 
Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHVYENHVEALREQLARRDQALSAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V+V
Sbjct: 239 YDFTPEDVTLDGYEHLGKLSMTVAV 263


>gi|321311405|ref|YP_004203692.1| thymidylate synthase [Bacillus subtilis BSn5]
 gi|320017679|gb|ADV92665.1| thymidylate synthase [Bacillus subtilis BSn5]
          Length = 279

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 101/275 (36%), Positives = 153/275 (55%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ +I  G              D T   T S    QMRFD S+  P+LTTKKV 
Sbjct: 6   KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVA 64

Query: 52  WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY-DGNVI 109
           WK+ + ELLW  +   ++V+ L++ GV IWD+W  +DG +G  YG Q        +G  +
Sbjct: 65  WKTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKV 124

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRHI   WN   +D M+L PC    Q+YV  GKL  ++  RS D
Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDDLDAMSLTPCVYETQWYVKQGKLHLEVRARSND 184

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P+
Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 244

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP + D  +F  +DF L +Y+    +L +V+V
Sbjct: 245 LWINPEVKDFYNFTIDDFKLINYKHGDKLLFEVAV 279


>gi|257125466|ref|YP_003163580.1| thymidylate synthase [Leptotrichia buccalis C-1013-b]
 gi|257049405|gb|ACV38589.1| thymidylate synthase [Leptotrichia buccalis C-1013-b]
          Length = 289

 Score =  281 bits (720), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 120/292 (41%), Positives = 164/292 (56%), Gaps = 31/292 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLD++++V+  G  + +RTGV T STF Y  + DLS+G+PLLTTKK+++ S++HEL 
Sbjct: 1   MKQYLDMVKYVLDNGVKKENRTGVDTISTFAYSYKVDLSEGYPLLTTKKMYFNSMLHELF 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP------------------ 102
           W+L G+ ++  L +    IWD WAD++G L   YG  WR +P                  
Sbjct: 61  WYLSGEEHIKNLRKK-TKIWDAWADEEGRLQTAYGRFWRRYPVPEISLDGEVFADEDNPW 119

Query: 103 ---DYDGNVI-DQISSIVQSLR------ADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
              + +G ++ DQI  I+ +L+           RR IV AWN        LPPCH  F F
Sbjct: 120 VTREENGQLVFDQIQYIIDTLKEMKTNPNHKNGRRMIVLAWNPGNATISKLPPCHYTFAF 179

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            V   KL+C L QRSGD+ LGIPFN+A YSLLTMM+A   G++ GEF HT+ D H+Y NH
Sbjct: 180 NVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEVGEFAHTIIDAHIYENH 239

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL+R P  L ++ I           +ED  L  YE H  I  +V+V
Sbjct: 240 IEGLKEQLTREPLKLAKIKIVDKP--FNELTFEDIMLEDYESHPVIKFEVAV 289


>gi|296330980|ref|ZP_06873455.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674499|ref|YP_003866171.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|317412153|sp|E0TVT6|TYSY1_BACPZ RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1;
           AltName: Full=Thymidylate synthase A; Short=TS A;
           Short=TSase A
 gi|296151985|gb|EFG92859.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412743|gb|ADM37862.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 279

 Score =  281 bits (720), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 101/275 (36%), Positives = 153/275 (55%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ ++  G              D T   T S    QMRFD S+  P+LTTKKV 
Sbjct: 6   KQYNSIIKDIMNNGISDEEFNVRTKWDSDGTPAHTLSVISKQMRFDNSE-VPILTTKKVA 64

Query: 52  WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-PDYDGNVI 109
           WK+ + ELLW  +   ++V+ L++ GV IWD+W  +DG +G  YG Q      + +G  +
Sbjct: 65  WKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRNLNGEKV 124

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV  GKL  ++  RS D
Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQWYVKQGKLHLEVRARSND 184

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P+
Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 244

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP + D   F  +DF L +Y+    +L +V+V
Sbjct: 245 LWINPEVKDFYDFTIDDFKLFNYKHGDKLLFEVAV 279


>gi|269798443|ref|YP_003312343.1| thymidylate synthase [Veillonella parvula DSM 2008]
 gi|269095072|gb|ACZ25063.1| thymidylate synthase [Veillonella parvula DSM 2008]
          Length = 263

 Score =  281 bits (720), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 102/265 (38%), Positives = 150/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+  ++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  +D MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLDDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239
           + L  M+A V G + G+F H + + H+Y NH +    QL+R       P++I+NP + D 
Sbjct: 179 AALQCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLARRNQALPAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V+V
Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263


>gi|125973742|ref|YP_001037652.1| thymidylate synthase [Clostridium thermocellum ATCC 27405]
 gi|256005544|ref|ZP_05430505.1| thymidylate synthase [Clostridium thermocellum DSM 2360]
 gi|281417898|ref|ZP_06248918.1| thymidylate synthase [Clostridium thermocellum JW20]
 gi|125713967|gb|ABN52459.1| thymidylate synthase [Clostridium thermocellum ATCC 27405]
 gi|255990524|gb|EEU00645.1| thymidylate synthase [Clostridium thermocellum DSM 2360]
 gi|281409300|gb|EFB39558.1| thymidylate synthase [Clostridium thermocellum JW20]
 gi|316940064|gb|ADU74098.1| thymidylate synthase [Clostridium thermocellum DSM 1313]
          Length = 276

 Score =  281 bits (719), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 12/271 (4%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++ + + +++ G             D T   T   FG   R+DLS+ FP+LT +  + K+
Sbjct: 8   FIAMCKDILENGVSSEGEKVRARWADGTPAHTIKKFGVVNRYDLSEEFPILTLRPTNLKA 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            + ELLW  +  SN   +      IWD WAD++G +G  YG Q      Y     DQ+  
Sbjct: 68  AIDELLWIWQKKSN--NIKDLNSHIWDSWADENGSIGKAYGYQLSIKHKYPEGEFDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
           I+  L+ +PYSRR I + +N + + +M L PC     F V   KL+  L QRS DV +  
Sbjct: 126 IIYDLKHNPYSRRIIANMYNHSDLHEMNLYPCAYSITFNVTGRKLNAILNQRSQDVLVAN 185

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
            +N+A Y++L  M A V   + GE +H + D H+Y+ H       + R+P   P++ INP
Sbjct: 186 NWNVAQYAILVHMFAQVCDLEVGELVHVIADAHIYDRHIPLVKELIQRTPYPAPKLWINP 245

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
              D   F+ EDF L  Y+    I    V++
Sbjct: 246 EKKDFYDFKVEDFVLEDYQAGPQIKNIPVAI 276


>gi|311993503|ref|YP_004010368.1| Td dTMP synthase [Acinetobacter phage Acj9]
 gi|295917460|gb|ADG60131.1| Td dTMP synthase [Acinetobacter phage Acj9]
          Length = 320

 Score =  281 bits (719), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 122/320 (38%), Positives = 171/320 (53%), Gaps = 56/320 (17%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M QY DL++ ++  G     +RTG GT S FG Q++FDL+  FP +TTKK+ WK+VV EL
Sbjct: 1   MQQYHDLMQKILDEGDLIETERTGTGTLSIFGEQLKFDLADYFPAITTKKLAWKAVVSEL 60

Query: 60  LWFLRGDSNVSYLH-----------RHGVSIWDEWADK--------DGELGPIYGVQWRS 100
           LWFL+G SN++ L                +IWD   +K        DGE+G IYG QWRS
Sbjct: 61  LWFLKGSSNLNELRAILHGEENRFNEEKKTIWDGNYNKQAKDLGYTDGEMGDIYGAQWRS 120

Query: 101 WP-----------------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI----- 138
           +                  DY+   +DQ+  ++   + +P SRR IV AWN  ++     
Sbjct: 121 FGRKTLQIEDENCKVVCYDDYEVKGVDQVKLVLDEAKRNPSSRRLIVQAWNPDVVWNSKK 180

Query: 139 -----------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
                      ++ ALPPCH ++Q  + NG+L     QRS D+FLG+ FNIASY+LL  +
Sbjct: 181 TKVGHTMIIGGNEAALPPCHLMYQLRIVNGRLDMSWSQRSNDIFLGVCFNIASYALLQHI 240

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF---RY 244
            A ++G + G+    LGD H+Y NH +Q  LQLSR   + PQ+ INP +  L  F     
Sbjct: 241 FARILGLKVGKLTGFLGDCHIYLNHVDQVKLQLSRDHLSKPQLEINPALKTLEDFENATV 300

Query: 245 EDFTLRSYEPHAAILAKVSV 264
           +DF L     H AI A ++V
Sbjct: 301 DDFKLVGLITHGAIKADMAV 320


>gi|313892103|ref|ZP_07825699.1| thymidylate synthase [Dialister microaerophilus UPII 345-E]
 gi|313119495|gb|EFR42691.1| thymidylate synthase [Dialister microaerophilus UPII 345-E]
          Length = 263

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 101/267 (37%), Positives = 156/267 (58%), Gaps = 12/267 (4%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL +++++++ GS   +RTG+         M+FDL K FP+LTTK V +K+ + E+LW
Sbjct: 5   KQYLGIVKNILENGSLGNNRTGMPAYKLPHQIMQFDLEKEFPILTTKFVAFKTSIKEILW 64

Query: 62  FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
             +  SN V  L +    IWDEW  KDG +G  YG Q + +         Q+ +++  L+
Sbjct: 65  IWQKQSNDVRELQKWNCHIWDEWMLKDGTIGKAYGYQLKEYK--------QVDTLLDLLK 116

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIA 179
            +P SRR +V  WNV  + +MAL PC  L  + V  +G+L+C L QRSGD+ LG+PFN+A
Sbjct: 117 NNPESRRMVVDLWNVKDLPEMALYPCAFLTMWDVTSDGRLNCMLVQRSGDMGLGVPFNMA 176

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIV 237
            Y+ LT M+A V G + G F H + + H+Y NH E   +QL+R       P++++N ++ 
Sbjct: 177 QYAALTHMIAQVSGLKAGLFTHVINNAHIYQNHVEALKVQLARLDEAYEAPKIVLNKDVK 236

Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +   F+ ED  L +Y+ H  +   VSV
Sbjct: 237 NFYDFKPEDIVLENYKHHGKLPMAVSV 263


>gi|26353640|dbj|BAC40450.1| unnamed protein product [Mus musculus]
          Length = 222

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 20/222 (9%)

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 1   IKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 60

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 61  DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 120

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 121 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 180

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 181 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 222


>gi|329121533|ref|ZP_08250156.1| thymidylate synthase [Dialister micraerophilus DSM 19965]
 gi|327468832|gb|EGF14305.1| thymidylate synthase [Dialister micraerophilus DSM 19965]
          Length = 263

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 100/267 (37%), Positives = 155/267 (58%), Gaps = 12/267 (4%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL +++++++ GS   +RTG+         M+FDL K FP+LTTK V +K+ + E+LW
Sbjct: 5   KQYLGIVKNILENGSLGNNRTGMSAYKLPHQIMQFDLEKEFPILTTKFVAFKTSIKEILW 64

Query: 62  FLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
             +  SN V  L +    IWDEW   DG +G  YG Q + +         Q+ +++  L+
Sbjct: 65  IWQKQSNDVRELQKWNCHIWDEWMLNDGTIGKAYGYQLKEYK--------QVDTLLDLLK 116

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNIA 179
            +P SRR +V  WNV  + +MAL PC  L  + V  +G+L+C L QRSGD+ LG+PFN+A
Sbjct: 117 NNPESRRMVVDLWNVKDLPEMALYPCAFLTMWDVASDGRLNCMLVQRSGDMGLGVPFNMA 176

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIV 237
            Y+ LT M+A V G + G F H + + H+Y NH E   +QL+R       P++++N ++ 
Sbjct: 177 QYAALTHMIAQVSGLKAGLFTHVINNAHIYQNHVEALKVQLARLDEAYEAPKIVLNKDVK 236

Query: 238 DLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +   F+ ED  L +Y+ H  +   VSV
Sbjct: 237 NFYDFKPEDIVLENYKHHGKLPMAVSV 263


>gi|62901136|sp|Q5D189|TYSY_BACNA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|60280529|gb|AAX18246.1| thymidylate synthase A [Bacillus subtilis subsp. natto]
 gi|291484369|dbj|BAI85444.1| thymidylate synthase [Bacillus subtilis subsp. natto BEST195]
          Length = 279

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 101/275 (36%), Positives = 154/275 (56%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ +I  G              D T   T S    QMRFD S+  P+LTTKKV 
Sbjct: 6   KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMSKQMRFDNSE-VPILTTKKVA 64

Query: 52  WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY-DGNVI 109
           WK+ + ELLW  +   ++V+ L++ GV IWD+W  +DG +G  YG Q        +G  +
Sbjct: 65  WKTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKV 124

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRHI   WN   +D M+L PC    Q+YV +GKL  ++  RS D
Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDDLDAMSLTPCVYETQWYVKHGKLHLEVRARSND 184

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P+
Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 244

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP + D  +F  +DF L +Y+    +L +V+V
Sbjct: 245 LWINPEVKDFYNFTIDDFKLINYKHGDKLLFEVAV 279


>gi|136605|sp|P07606|TYSY_BPPHT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|215473|gb|AAA32353.1| thymidylate synthetase (EC 2.1.1.45) [Bacillus phage phi3T]
 gi|224477|prf||1106183A thymidylate synthetase
          Length = 279

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 102/275 (37%), Positives = 153/275 (55%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ +I  G              D T   T S    QMRFD S+  P+LTTKKV 
Sbjct: 6   KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMSKQMRFDNSE-VPILTTKKVA 64

Query: 52  WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY-DGNVI 109
           WK+ + ELLW  +   ++V+ L++ GV IWD+W  +DG +G  YG Q        +G  +
Sbjct: 65  WKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKV 124

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV  GKL  ++  RS D
Sbjct: 125 DQVDYLLHQLKNNPSSRRHITMLWNPDDLDAMALTPCVYETQWYVKQGKLHLEVRARSND 184

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +Q+ R     P+
Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPE 244

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP + D  +F  +DF L +Y+    +L +V+V
Sbjct: 245 LWINPEVKDFYNFTVDDFKLINYKHGDKLLFEVAV 279


>gi|314121810|ref|YP_004063929.1| dTMP thymidylate synthase [Enterobacteria phage vB_EcoM-VR7]
 gi|313151567|gb|ADR32623.1| dTMP thymidylate synthase [Enterobacteria phage vB_EcoM-VR7]
          Length = 286

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 32/291 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y DL++ V   G    DRTG GT +TFG ++ +D+S+GFP  T K++ +KSVV ELL
Sbjct: 1   MKNYQDLIQTVFDIGYQTDDRTGTGTIATFGTKVEWDMSEGFPATTVKRLAYKSVVGELL 60

Query: 61  WFLRGDSNVSYLHR-------HGVSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WFL G +NV  L            +IWD+  +         DGELGP+YG QWR +    
Sbjct: 61  WFLEGSTNVERLREITHGPDSDKKTIWDQNFEAQGRALGYVDGELGPVYGKQWRDF---- 116

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ+   ++ ++  P  RR IVSAWN A + +MALPPCH L+QF V +G+L    YQ
Sbjct: 117 -GGVDQLVETIEKVKKVPTDRRQIVSAWNPAELKQMALPPCHLLYQFNVHDGELDLLWYQ 175

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DVFLG+PF+I SY  L  ++A +   + G+ I   G+ H+Y NH EQ    L R P+
Sbjct: 176 RSVDVFLGLPFDIGSYGTLLHIVAKMTRLKPGKLIFMGGNTHIYLNHIEQCKEVLRREPK 235

Query: 226 TLPQMIIN-PNIVDLLSFRYE-----------DFTLRSYEPHAAILAKVSV 264
           TLP + IN P    L     +           DF L +YEPH  I A ++V
Sbjct: 236 TLPTLKINWPEQFQLWDTEMQLYWVTRHMSPGDFVLENYEPHPTIPAPMAV 286


>gi|182418738|ref|ZP_02950011.1| thymidylate synthase [Clostridium butyricum 5521]
 gi|237669671|ref|ZP_04529648.1| thymidylate synthase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377432|gb|EDT74988.1| thymidylate synthase [Clostridium butyricum 5521]
 gi|237654745|gb|EEP52308.1| thymidylate synthase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 263

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/265 (35%), Positives = 144/265 (54%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL + + +++ G    +RTG+ T       M+F+L K FP+LTTK V +K+ V ELLW 
Sbjct: 7   KYLSIAKDILENGYYDNNRTGMPTYKLPHQIMQFNLEKEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +   +NV  L    V IWDEW  +DG +G  YG   + +        +QI  ++ +L+ 
Sbjct: 67  FKDQSNNVKDLQAQNVRIWDEWEMEDGTIGTSYGWVVKKF--------NQIDKLIDALKN 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           +P  RR +++ W    +D  AL PC     + V +G+L+C L QRSGD+ LG+PFN + Y
Sbjct: 119 NPQDRRMMLNLWQWEHLDGGALYPCCWATMWDVTDGRLNCMLIQRSGDLPLGVPFNTSQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDL 239
           ++L  +LA V G + G F H + + H+Y N  E    QL+R       P++ INP I + 
Sbjct: 179 AVLVHLLAQVTGLKPGLFTHVINNAHIYENQIEGMKTQLTRKDDAYDAPKLWINPEIKNF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ++  L  Y+ H  I   VSV
Sbjct: 239 YDFTPDNIKLIDYKHHETIKMPVSV 263


>gi|294794647|ref|ZP_06759783.1| thymidylate synthase [Veillonella sp. 3_1_44]
 gi|294454977|gb|EFG23350.1| thymidylate synthase [Veillonella sp. 3_1_44]
          Length = 263

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+  ++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  ++ MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDL 239
           + L  M+  V G + G+F H + + H+Y NH +    QL+R       P++I+NP + D 
Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARREQALPAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V+V
Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263


>gi|303231865|ref|ZP_07318576.1| thymidylate synthase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513472|gb|EFL55503.1| thymidylate synthase [Veillonella atypica ACS-049-V-Sch6]
          Length = 263

 Score =  279 bits (713), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 100/265 (37%), Positives = 148/265 (55%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLNIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+ +++++++ 
Sbjct: 67  WQMQSNDVRKLQDMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  +  MAL PC     + V NG L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLPDMALQPCAYETLWDVGNGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239
           + L  M+A V G + G+F H + + H+Y NH +    QLSR       P++ +N  I D 
Sbjct: 179 AALLCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLSRRDQALPAPKISVNSQITDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L  YE    +   V+V
Sbjct: 239 YDFTPDDIVLEGYEHLGKLAMTVAV 263


>gi|282849967|ref|ZP_06259350.1| thymidylate synthase [Veillonella parvula ATCC 17745]
 gi|282580404|gb|EFB85804.1| thymidylate synthase [Veillonella parvula ATCC 17745]
          Length = 263

 Score =  279 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+  ++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  ++ MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--SPRTLPQMIINPNIVDL 239
           + L  M+  V G + G+F H + + H+Y NH +    QL+R       P++I+NP + D 
Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARRDQALPAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V+V
Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAV 263


>gi|291287305|ref|YP_003504121.1| thymidylate synthase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884465|gb|ADD68165.1| thymidylate synthase [Denitrovibrio acetiphilus DSM 12809]
          Length = 287

 Score =  279 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 118/290 (40%), Positives = 159/290 (54%), Gaps = 29/290 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  Y D++R+V+  G    +RTGV T S F Y  R +L+ G+PLLTTKK+ + S+VHEL 
Sbjct: 1   MQVYKDMVRYVMDNGVYLPNRTGVATYSVFSYFYRVNLADGYPLLTTKKMFFNSMVHELF 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGN------------- 107
           W+L G+ ++  L      IWD WAD++G L   YG  WR +P  +               
Sbjct: 61  WYLSGEEHIKDLRTK-TKIWDAWADEEGLLETAYGRFWRRFPVPEKGLNGENWGKKWTHK 119

Query: 108 -------VIDQISSIVQSLR---ADPYS---RRHIVSAWNVALIDKMALPPCHCLFQFYV 154
                  V DQI  ++ +L+    +P     RR +VSAW+ A   +  LPPCH  + F V
Sbjct: 120 DPETGQMVFDQIQYVIDNLKEVKNNPNCSAQRRLVVSAWHPANAAESKLPPCHYTYCFSV 179

Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
             GKL+C L QRSGD+ LGIPFN++ Y+LLTMMLA   G + GEF HT+ D H+Y NH E
Sbjct: 180 KAGKLNCHLTQRSGDIALGIPFNLSCYALLTMMLAKETGLKVGEFAHTIIDAHIYENHME 239

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               QL R P TLP++ I           + D  L  YE H  I  +V+V
Sbjct: 240 GLKEQLEREPLTLPKVEIADKP--FDQLSFADIKLVDYESHPGIRFEVAV 287


>gi|26353070|dbj|BAC40165.1| unnamed protein product [Mus musculus]
          Length = 222

 Score =  278 bits (712), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 20/222 (9%)

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 1   IKGYTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDS 60

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV NG+LSCQ
Sbjct: 61  DYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 120

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 121 LYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 180

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 181 EPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV 222


>gi|294792888|ref|ZP_06758035.1| thymidylate synthase [Veillonella sp. 6_1_27]
 gi|294456787|gb|EFG25150.1| thymidylate synthase [Veillonella sp. 6_1_27]
          Length = 263

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 99/265 (37%), Positives = 149/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+  ++++++ 
Sbjct: 67  WQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDKLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  ++ MAL PC     + V +G L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP--RTLPQMIINPNIVDL 239
           + L  M+  V G + G+F H + + H+Y NH +    QL+R       P++I+NP + D 
Sbjct: 179 AALQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARREQALPAPKIIVNPEVKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  ED TL  YE    +   V++
Sbjct: 239 YDFTPEDITLDGYEHLGKLSMTVAI 263


>gi|262037574|ref|ZP_06011030.1| thymidylate synthase [Leptotrichia goodfellowii F0264]
 gi|261748396|gb|EEY35779.1| thymidylate synthase [Leptotrichia goodfellowii F0264]
          Length = 289

 Score =  277 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 120/292 (41%), Positives = 162/292 (55%), Gaps = 31/292 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL+L++HV+  G  + +RT V T STF Y  + DLSKGFPLLTTKK+++ S++HEL 
Sbjct: 1   MKEYLELVKHVLDNGVRKENRTEVDTISTFAYTYKVDLSKGFPLLTTKKMYFNSMLHELF 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP------------------ 102
           W+L G+ ++  L      IWD WAD++G L   YG  WR +P                  
Sbjct: 61  WYLTGEEHIKNLRTK-TKIWDAWADEEGRLETAYGRFWRRYPVPEISLDGEVFTDENNKW 119

Query: 103 ---DYDGNVI-DQISSIVQSLR------ADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
              + +G ++ DQI  I+ +L+           RR IV AWN        LPPCH  F F
Sbjct: 120 TKREKNGQLVFDQIQYIIDTLKEMKTNPNHKNGRRLIVLAWNPGNASISKLPPCHYTFAF 179

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            V   +L+C L QRSGD+ LGIPFN+A YSLLTMM+A   G++ GEF HT+ D H+Y NH
Sbjct: 180 NVLGNRLNCHLTQRSGDIALGIPFNLACYSLLTMMIAKECGYEPGEFSHTIIDAHIYENH 239

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            E    QL+R P  L ++ I           +ED  L  YE H  I  +V+V
Sbjct: 240 IEGLKEQLTREPLKLSKITIADKP--FNELTFEDIKLEDYESHPVIKFEVAV 289


>gi|52080405|ref|YP_079196.1| thymidylate synthase [Bacillus licheniformis ATCC 14580]
 gi|52785784|ref|YP_091613.1| thymidylate synthase [Bacillus licheniformis ATCC 14580]
 gi|3122985|sp|Q59212|TYSY_BACLI RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName:
           Full=Thymidylate synthase A; Short=TS A; Short=TSase A
 gi|62901267|sp|Q65J44|TYSY_BACLD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|1359509|emb|CAA90533.1| thymidylate synthetase [Bacillus licheniformis]
 gi|52003616|gb|AAU23558.1| thymidylate synthase A [Bacillus licheniformis ATCC 14580]
 gi|52348286|gb|AAU40920.1| ThyA [Bacillus licheniformis ATCC 14580]
          Length = 279

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 100/275 (36%), Positives = 153/275 (55%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ +I+ G              D T   T S    +MRFD S+  P+LTTKKV 
Sbjct: 6   QQYNAIIQKIIESGISDEEYQVRTKWDSDGTPAHTLSIMSEKMRFDNSE-VPILTTKKVA 64

Query: 52  WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-PDYDGNVI 109
           WK+ + ELLW  +   ++V  L+  GV IWD+W  +DG +G  YG Q        +G  +
Sbjct: 65  WKTAIKELLWIWQLKSNDVQVLNDMGVHIWDQWRLEDGTIGAAYGYQLGKKNRTVNGQKV 124

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRH+   WN   +D MAL PC    Q+YV  GKLS ++  RS D
Sbjct: 125 DQVDYLLHQLKHNPSSRRHLTMLWNPDDLDGMALTPCVYETQWYVKEGKLSLEVRARSND 184

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V+G++ GE+I  +GD H+Y  H +  ++Q+ R     P+
Sbjct: 185 MALGNPFNVFQYNVLQRMIAQVLGYELGEYIFNIGDCHIYTRHIDNLNIQMKREQYEAPK 244

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP+I +   F  +DF L  Y+    +  +V+V
Sbjct: 245 LWINPDIKNFYDFTIDDFKLIDYKHGDKLTFEVAV 279


>gi|319645637|ref|ZP_07999869.1| thymidylate synthase A [Bacillus sp. BT1B_CT2]
 gi|317392523|gb|EFV73318.1| thymidylate synthase A [Bacillus sp. BT1B_CT2]
          Length = 300

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 100/275 (36%), Positives = 153/275 (55%), Gaps = 13/275 (4%)

Query: 2   HQYLDLLRHVIKFGSDRR----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
            QY  +++ +I+ G              D T   T S    +MRFD S+  P+LTTKKV 
Sbjct: 27  QQYNAIIQKIIESGISDEEYQVRTKWDSDGTPAHTLSIMSEKMRFDNSE-VPILTTKKVA 85

Query: 52  WKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW-PDYDGNVI 109
           WK+ + ELLW  +   ++V  L+  GV IWD+W  +DG +G  YG Q        +G  +
Sbjct: 86  WKTAIKELLWIWQLKSNDVQVLNDMGVHIWDQWRLEDGTIGAAYGYQLGKKNRTVNGQKV 145

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+  ++  L+ +P SRRH+   WN   +D MAL PC    Q+YV  GKLS ++  RS D
Sbjct: 146 DQVDYLLHQLKHNPSSRRHLTMLWNPDDLDGMALTPCVYETQWYVKEGKLSLEVRARSND 205

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG PFN+  Y++L  M+A V+G++ GE+I  +GD H+Y  H +  ++Q+ R     P+
Sbjct: 206 MALGNPFNVFQYNVLQRMIAQVLGYELGEYIFNIGDCHIYTRHIDNLNIQMKREQYEAPK 265

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + INP+I +   F  +DF L  Y+    +  +V+V
Sbjct: 266 LWINPDIKNFYDFTIDDFKLIDYKHGDKLTFEVAV 300


>gi|258646536|ref|ZP_05734005.1| thymidylate synthase [Dialister invisus DSM 15470]
 gi|260403948|gb|EEW97495.1| thymidylate synthase [Dialister invisus DSM 15470]
          Length = 264

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/266 (39%), Positives = 156/266 (58%), Gaps = 12/266 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++++++  GS   +RTG+         M+FDL K FP+LTTK V +K+ V E+LW 
Sbjct: 7   QYLGIIKNILDAGSLGDNRTGMPAYKLPHQIMQFDLEKEFPILTTKFVAFKTSVKEILWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L +    +WDEW  +DG +G  YG Q   +         Q+ +++++L+ 
Sbjct: 67  WQKQSNDVRLLQQWNCHVWDEWMQEDGTIGKAYGYQLGKYH--------QVDTLLETLKK 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIAS 180
           DP SRR +V  WNV  +  MAL PC  L  + V D+G+L+C L QRSGD+ LG+PFN+A 
Sbjct: 119 DPQSRRMVVDLWNVKDLPDMALYPCAFLTMWDVSDDGRLNCMLVQRSGDMGLGVPFNMAQ 178

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT--LPQMIINPNIVD 238
           Y+ L  M+A V G + G F H + + H+Y NH +    QL+R P+    P + +NP++ D
Sbjct: 179 YAALVHMIAQVSGLRVGLFTHVINNAHVYRNHVDAMKTQLARLPKAYDAPVLKLNPDVHD 238

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
              F+ ED  L +Y+ H  I  +VSV
Sbjct: 239 FYDFKPEDIVLENYKHHEKIAMEVSV 264


>gi|254490316|ref|ZP_05103505.1| thymidylate synthase [Methylophaga thiooxidans DMS010]
 gi|224464449|gb|EEF80709.1| thymidylate synthase [Methylophaga thiooxydans DMS010]
          Length = 273

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/272 (39%), Positives = 153/272 (56%), Gaps = 37/272 (13%)

Query: 30  FGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS-------NVSYLHRHGVSIW-- 80
           FG  +RFDLS+GFP  TTK+V+WK+   E+LW L+G S       N+  L    V IW  
Sbjct: 2   FGETLRFDLSEGFPAFTTKRVYWKTAFKEMLWMLKGKSKWGTGNPNIRDLLEQNVHIWSE 61

Query: 81  --------------------------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
                                     DE+A + G+LGP+YG QWR+W   DG  IDQ+S 
Sbjct: 62  WPHKKYVDETGDDITLKSFEERVLTDDEFASQWGDLGPVYGKQWRAWKTEDGREIDQVSE 121

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFL 172
           +++ ++ +P SRR I   WNV  +D+MALPPCH  +QF+VD   G +S  L QRS D FL
Sbjct: 122 VLEQIKNNPTSRRIIFEGWNVGELDQMALPPCHKHYQFFVDPVKGTVSGSLVQRSADTFL 181

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
           G+ FN+ + +L+T ++A   G+  GE +    DVH+Y NH +Q   QLSR P+  P+++I
Sbjct: 182 GVAFNVCNLALITTLIAEHTGYMPGEIVWYGLDVHVYLNHLDQVREQLSREPKAFPKLVI 241

Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                 L  +  +D  L  Y+PH AI A V++
Sbjct: 242 KSKKKSLFDYTIDDLGLEGYDPHPAIKAPVAI 273


>gi|303228494|ref|ZP_07315325.1| thymidylate synthase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516852|gb|EFL58763.1| thymidylate synthase [Veillonella atypica ACS-134-V-Col7a]
          Length = 263

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 101/265 (38%), Positives = 151/265 (56%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL+++ +++  G   ++RTG+ T       M+FDL + FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLNIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +  SN V  L    V +WDEW  +DG +G  YG Q   +         Q+ +++++++ 
Sbjct: 67  WQMQSNDVRKLQDMNVHVWDEWMREDGTIGKAYGYQIAKYK--------QLDNLIKTIKE 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP SRR IV+ WN+  +  MAL PC     + V NG L+C L QRSGD+ LG+PFN A Y
Sbjct: 119 DPDSRRMIVTLWNIEDLPDMALQPCAYETLWDVGNGYLNCMLIQRSGDMGLGVPFNTAQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL--PQMIINPNIVDL 239
           + L  M+A V G + G+F H + + H+Y NH +    QLSR  + L  P++ +N +I D 
Sbjct: 179 AALLCMIAQVTGLKPGKFTHVINNAHIYENHVDALREQLSRRDQALRAPKIRVNSDITDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
             F  +D  L  YE    +   V+V
Sbjct: 239 YEFSPDDIVLEGYEHLGKLAMTVAV 263


>gi|151945700|gb|EDN63941.1| thymidylate synthase [Saccharomyces cerevisiae YJM789]
          Length = 259

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 113/280 (40%), Positives = 149/280 (53%), Gaps = 48/280 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + +I  G  R DRTG                    LL+ + V           
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTDAN----------------LLSEQGVK---------- 44

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------DYDGNVIDQIS 113
              G+ +  YL + G         K G+LGP+YG QWR +         DY G  IDQ+ 
Sbjct: 45  IWDGNGSREYLDKMGFK-----DRKVGDLGPVYGFQWRHFGAKYKTCDDDYTGQGIDQLK 99

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLY 164
            ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV            +LSC LY
Sbjct: 100 QVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKEGEGSGKPRLSCLLY 159

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y +H +    Q+SR+P
Sbjct: 160 QRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDALKEQISRNP 219

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 220 RPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 259


>gi|1420229|emb|CAA99267.1| CDC21 [Saccharomyces cerevisiae]
          Length = 259

 Score =  275 bits (704), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/280 (40%), Positives = 149/280 (53%), Gaps = 48/280 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYLDL + +I  G  R DRTG                    LL+ + V           
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTDAN----------------LLSEQGVK---------- 44

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------DYDGNVIDQIS 113
              G+ +  YL + G         K G+LGP+YG QWR +         DY G  IDQ+ 
Sbjct: 45  IWDGNGSREYLDKMGFK-----DRKVGDLGPVYGFQWRHFGAKYKTCDDDYTGQGIDQLK 99

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD---------NGKLSCQLY 164
            ++  L+ +PY RR I+SAWN A  DKMALPPCH   QFYV            +LSC LY
Sbjct: 100 QVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKEGEGSGKPRLSCLLY 159

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS D+ LG+PFNIASY+LLT M+A V+  + GEFIHTLGD H+Y +H +    Q++R+P
Sbjct: 160 QRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDALKEQITRNP 219

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R  P++ I  ++ D+  F+  DF +  Y PH  I  K+SV
Sbjct: 220 RPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 259


>gi|290968843|ref|ZP_06560380.1| thymidylate synthase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781139|gb|EFD93730.1| thymidylate synthase [Megasphaera genomosp. type_1 str. 28L]
          Length = 263

 Score =  274 bits (701), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 99/265 (37%), Positives = 147/265 (55%), Gaps = 11/265 (4%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL ++ +++K G    +RTG+ T       M+FDL++ FP+LTTK V +K+ V ELLW 
Sbjct: 7   QYLTIVENILKNGYYADNRTGIPTYKLPHQVMQFDLAEEFPILTTKFVAFKTAVKELLWI 66

Query: 63  LR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            +   +NV  L      +WDEW   DG +G  YG Q R +         Q  +++ +L+ 
Sbjct: 67  WQLQSNNVHDLQAMNCHVWDEWMRPDGTIGKAYGYQIRKYK--------QTDTLLHTLKT 118

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
           DP +RR IVS WN+  +  MAL PC     + V++G+L+C L QRSGD+ LG+PFN+  Y
Sbjct: 119 DPQNRRMIVSLWNIEDLPDMALEPCAYQTLWDVNDGRLNCLLIQRSGDMGLGVPFNMTQY 178

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR--TLPQMIINPNIVDL 239
           ++L  ++A V G   G F H + + H+Y NH      QL+R       P + IN NI D 
Sbjct: 179 AVLVHLIAQVTGLTPGLFTHVINNAHIYENHVAALQTQLARKELAPAAPTLEINKNIKDF 238

Query: 240 LSFRYEDFTLRSYEPHAAILAKVSV 264
            +F  ED  L  Y+    +  +V+V
Sbjct: 239 YAFTPEDIQLIHYKHLGKLPMEVAV 263


>gi|328912174|gb|AEB63770.1| Thymidylate synthase 1 [Bacillus amyloliquefaciens LL3]
          Length = 279

 Score =  274 bits (701), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 97/248 (39%), Positives = 145/248 (58%), Gaps = 3/248 (1%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGV 77
            D T   T S    QMRFD S+  P+LTTKKV WK+ + ELLW  +   ++V+ L++ GV
Sbjct: 33  TDGTPAHTLSVISKQMRFDNSE-IPILTTKKVAWKTAIKELLWIWQCKSNDVNELNKMGV 91

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDY-DGNVIDQISSIVQSLRADPYSRRHIVSAWNVA 136
            IWD+W  +DG +G  YG Q        +G  +DQ+  ++  L+ +P SRRHI + WN  
Sbjct: 92  HIWDQWKQEDGTIGKAYGYQLGKKNRMLNGEKVDQVDYLIHQLKNNPSSRRHITTLWNPD 151

Query: 137 LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196
            +D MAL PC    Q+ V  GKL  +++ RS D+ LG PFN+  Y++L  M+A V G++ 
Sbjct: 152 ELDSMALTPCVYGTQWLVKGGKLHLEVFCRSNDLALGNPFNVFQYNVLQRMIAQVTGYEL 211

Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           GE+I  +GD H+Y  H +   +Q+ R     P++ INPN+ D   F  +DF L +Y+   
Sbjct: 212 GEYIFNIGDCHVYTRHIDNLKIQMDREQYEAPELWINPNVKDFYDFTIDDFKLINYKHGD 271

Query: 257 AILAKVSV 264
            +  +V+V
Sbjct: 272 KLYFEVAV 279


>gi|312897560|ref|ZP_07756980.1| thymidylate synthase [Megasphaera micronuciformis F0359]
 gi|310621412|gb|EFQ04952.1| thymidylate synthase [Megasphaera micronuciformis F0359]
          Length = 267

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 99/266 (37%), Positives = 150/266 (56%), Gaps = 11/266 (4%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QYL+++ ++++ G   ++RTG+ T       M+FDL K FP+LTTK V +K+ V ELLW
Sbjct: 10  EQYLNIVENILEHGYFDQNRTGIRTYKLPHQMMQFDLEKEFPILTTKFVAFKTAVKELLW 69

Query: 62  FLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
             +   ++V  L +    +WDEW  +DG +G  YG Q R +         Q+ +++  LR
Sbjct: 70  IWQLQSNDVRELQKMNCHVWDEWMREDGTIGKAYGYQIRKYK--------QVDTLLDQLR 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP +RR IVS WN+  +  MAL PC     + V +G+L+C L QRSGD+ LGIPFN+  
Sbjct: 122 TDPQNRRMIVSLWNIEDLPDMALQPCAYQTLWDVSDGRLNCMLVQRSGDMGLGIPFNMTQ 181

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SRSPRTLPQMIINPNIVD 238
           Y++L  ++A  +G + G F H + + H+Y NH E    QL   R     PQ++I+  I D
Sbjct: 182 YAVLVHLIARSVGLRPGLFTHVINNAHIYENHVEALKTQLARRREALPAPQLVIDEGITD 241

Query: 239 LLSFRYEDFTLRSYEPHAAILAKVSV 264
              FR E+  L  Y     +  +V+V
Sbjct: 242 FYEFRPENIRLEGYTHKGKLPMEVAV 267


>gi|213159274|ref|YP_002321317.1| thymidylate synthase/pyrimidine hydroxymethylase-like protein
           [Oryctes rhinoceros virus]
 gi|108515120|gb|ABF93345.1| putative thymidylate synthase [Oryctes rhinoceros virus]
 gi|202073460|gb|ACH96136.1| thymidylate synthase/pyrimidine hydroxymethylase-like protein
           [Oryctes rhinoceros virus]
          Length = 321

 Score =  272 bits (697), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 127/293 (43%), Positives = 177/293 (60%), Gaps = 31/293 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
             YL L+R V+K  S   +RTG+  RS+FG+Q+RFDL  G  PLLTTK + +K+++ EL 
Sbjct: 30  RNYLSLVRTVLKAPSS-PNRTGIDARSSFGHQLRFDLRNGVLPLLTTKPMPFKTILRELF 88

Query: 61  WFLRGDSNVSYLHRHGVSIWD-------------EWADKDGELGPIYGVQWRSWP----- 102
           WFLRG++N   L R  V IW                  +   LGPIYG QWR +      
Sbjct: 89  WFLRGETNQKILERQNVHIWKGNSSREYLDSRGLYDYTEYESLGPIYGFQWRHFGASYVD 148

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD--NG 157
              DY    +DQ+  ++++++ DP SRR I+SAWN   +DKMALPPCH L QF+V+  NG
Sbjct: 149 CNTDYTNKGVDQLQQVIRTIKEDPTSRRIIMSAWNPVDLDKMALPPCHILVQFHVNTVNG 208

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           +LS QLYQRS D+ LG+PFNIASYS+L  ++A + G + G FIH+LGDVH+Y NH   A 
Sbjct: 209 ELSAQLYQRSADLMLGVPFNIASYSILVHLIAKICGLKPGYFIHSLGDVHIYENHVSGAK 268

Query: 218 LQLSRSPRTLPQMIINPNIV-DLLSF----RYEDFTLRSYEPHA-AILAKVSV 264
            QL+R P+  P + I+ +   DL S       + F L +Y+ +   I  +++V
Sbjct: 269 EQLTREPQRQPYLNIDIDPTLDLDSILEQLSCDQFKLVNYKYNPNPIKLEMAV 321


>gi|70733180|ref|YP_262953.1| thymidylate synthase [Pseudomonas fluorescens Pf-5]
 gi|68347479|gb|AAY95085.1| thymidylate synthase [Pseudomonas fluorescens Pf-5]
          Length = 323

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 112/323 (34%), Positives = 166/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HVI  G+ + +RTGV T S  G  +R+DL +GFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVAHVINNGTKQANRTGVNTISFPGAMLRYDLKEGFPAITTRKMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDY---- 104
            FLRG +N +     G  +WD+ A++            D +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGDDDLGEIYGVQWRKWPAYKQIK 120

Query: 105 -----------------------DGNV-------IDQISSIVQSLRADPYSRRHIVSAWN 134
                                  DG         IDQ+   V ++  DP SRR +   WN
Sbjct: 121 TSNQAAIDLALSQGYRQIAAGEEDGQGYVVLYKAIDQVRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V   ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + QL R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPFPMPKLVISERVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  YE HA + A ++V
Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323


>gi|197303683|ref|ZP_03168720.1| hypothetical protein RUMLAC_02412 [Ruminococcus lactaris ATCC
           29176]
 gi|197297203|gb|EDY31766.1| hypothetical protein RUMLAC_02412 [Ruminococcus lactaris ATCC
           29176]
          Length = 301

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 89/279 (31%), Positives = 136/279 (48%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++++ R +I+ G+            D T   T   FG   R+DLSK FP LT ++   
Sbjct: 25  KVFINMCRDIIENGTSTEGEKVRPKWEDGTAAYTIKKFGVVNRYDLSKEFPALTLRRTAI 84

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS V ELLW  +  SN   +H     IWD WAD++G +G  YG Q +    Y   ++DQ+
Sbjct: 85  KSCVDELLWIWQKKSN--NVHELKSHIWDSWADENGSIGKAYGYQMQVKHQYKEGMMDQV 142

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166
             ++  L+ +PYSRR + + +    + +M L PC     F V   +      L+  L QR
Sbjct: 143 DRVLYDLKENPYSRRIMTNLYVHEDLHEMNLYPCAYSMTFNVTKEEGSEQLTLNGILNQR 202

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV     +N+  Y++L  M A V G + GE +H + D H+Y+ H    +  +SR P  
Sbjct: 203 SQDVLTANNWNVCQYAVLLHMFAQVCGMKAGELVHVIADAHIYDRHIPLIEELISREPLP 262

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P+  +NP + D   F  +D  L  YE H  I    V++
Sbjct: 263 APKFWLNPEVKDFYDFTPDDVRLEDYETHPQIKNIPVAI 301


>gi|313501116|gb|ADR62482.1| ThyA [Pseudomonas putida BIRD-1]
          Length = 323

 Score =  272 bits (695), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 109/323 (33%), Positives = 158/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI  G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105
            FLRG  N       G  +WD+ A++              +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  +   + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241
           G+    F + +GD H+Y NH +  + QL R P   P+++I+  +                
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPSFAETGKYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF L  YE HA + A ++V
Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323


>gi|330806918|ref|YP_004351380.1| Thymidylate synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375026|gb|AEA66376.1| Thymidylate synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 323

 Score =  271 bits (694), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 110/323 (34%), Positives = 168/323 (52%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HVIK G+ + +RTGV T S  G  +R+DL  GFP +TT+K+ +KS + E+ 
Sbjct: 1   MKQYLDLVAHVIKNGTKQANRTGVNTISFPGAMLRYDLKDGFPAITTRKMAFKSAIGEMC 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG-- 106
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGEDDLGEIYGVQWRKWPAYKQIP 120

Query: 107 --------------------------------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   V ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEQTLAQGYRQIAEGEENGQAYVVLYKAIDQVRQCVDTIIKDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS---FRYE---- 245
           G+    F + +GD H+Y NH +  + QL+R P  +P+++I+  + +      ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLTREPFPMPKLVISERVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ HA + A ++V
Sbjct: 301 VEPSDFSLEGYQHHAPMTAPMAV 323


>gi|328553060|gb|AEB23552.1| thymidylate synthase [Bacillus amyloliquefaciens TA208]
          Length = 279

 Score =  271 bits (694), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 95/248 (38%), Positives = 145/248 (58%), Gaps = 3/248 (1%)

Query: 19  RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGV 77
            D T   T S    QMRFD S+  P+LTTKKV WK+ + ELLW  +   ++V+ L++ GV
Sbjct: 33  TDGTPAHTLSVISKQMRFDNSE-VPILTTKKVAWKTAIRELLWIWQLKSNDVNELNKMGV 91

Query: 78  SIWDEWADKDGELGPIYGVQWRSWPDY-DGNVIDQISSIVQSLRADPYSRRHIVSAWNVA 136
            IWD+W  +DG +G  YG Q        +G  +DQ+  ++  L+ +P SRRHI + WN  
Sbjct: 92  HIWDQWKQEDGTIGKAYGYQLGKKNRMLNGEKVDQVDYLIHQLKNNPSSRRHITTLWNPD 151

Query: 137 LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196
            +D MAL PC    Q+ +  GKL  +++ RS D+ LG PFN+  Y++L  M+A V G++ 
Sbjct: 152 ELDSMALTPCVYGTQWLIKGGKLHLEVFCRSSDLALGNPFNVFQYNVLQRMIAQVTGYEL 211

Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           GE+I  +GD H+Y  H +   +Q+ R     P++ INP++ D   F  +DF L +Y+   
Sbjct: 212 GEYIFNIGDCHVYTRHIDNLKIQMDREQHEAPELWINPDVKDFYDFTIDDFKLINYKHGD 271

Query: 257 AILAKVSV 264
            +  +V+V
Sbjct: 272 KLYFEVAV 279


>gi|170719511|ref|YP_001747199.1| thymidylate synthase [Pseudomonas putida W619]
 gi|169757514|gb|ACA70830.1| Thymidylate synthase [Pseudomonas putida W619]
          Length = 323

 Score =  271 bits (693), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 110/323 (34%), Positives = 159/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI+ G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIENGTLQENRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105
            FLRG  N       G  +WD+ A++              +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEMAEKAGFRRIAQDEEDGQAFVVLYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V   ++S  LY RS D+ LG PFN+   + L  +   + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP-----------NIVDLLS 241
           G+    F + +GD H+Y NH +  + QL R P   P+++I+                L  
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  YE HA + A ++V
Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323


>gi|77461594|ref|YP_351101.1| thymidylate synthase [Pseudomonas fluorescens Pf0-1]
 gi|77385597|gb|ABA77110.1| thymidylate synthase [Pseudomonas fluorescens Pf0-1]
          Length = 323

 Score =  271 bits (693), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 111/323 (34%), Positives = 166/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+ HVI  G+ + +RTGV T S  G  +RFDL +GFP +TT+K+ +KS + E+ 
Sbjct: 1   MKQYLDLVSHVINNGTKQANRTGVNTISFPGAMLRFDLQEGFPAITTRKMAFKSAIGEMC 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG-- 106
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGEDDLGEIYGVQWRKWPAYKQIP 120

Query: 107 --------------------------------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   V ++  DP SRR +   WN
Sbjct: 121 LSNTAAIEQTLSNGYKQIAQGEEDGQAYVVLYKAIDQVRQCVDTIIKDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS---FRYE---- 245
           G+    F + +GD H+Y NH +  + QL R P  +P++ I+  + +      ++ E    
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPFAMPKLKISDRVPEFAKTGVYQPEWLEL 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  YE HA + A ++V
Sbjct: 301 VEPSDFSLEGYEHHAPMTAPMAV 323


>gi|28872394|ref|NP_795013.1| thymidylate synthase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|62901368|sp|Q87UL4|TYSY_PSESM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|28855649|gb|AAO58708.1| thymidylate synthase [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 323

 Score =  270 bits (692), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG SN +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   + ++  DP SRR +   WN
Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H A+ A ++V
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323


>gi|330987229|gb|EGH85332.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 323

 Score =  270 bits (692), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 106/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEGGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323


>gi|237802256|ref|ZP_04590717.1| thymidylate synthase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025113|gb|EGI05169.1| thymidylate synthase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 323

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/323 (33%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG SN +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323


>gi|213971428|ref|ZP_03399541.1| thymidylate synthase [Pseudomonas syringae pv. tomato T1]
 gi|301382144|ref|ZP_07230562.1| thymidylate synthase [Pseudomonas syringae pv. tomato Max13]
 gi|302060081|ref|ZP_07251622.1| thymidylate synthase [Pseudomonas syringae pv. tomato K40]
 gi|302132390|ref|ZP_07258380.1| thymidylate synthase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213923789|gb|EEB57371.1| thymidylate synthase [Pseudomonas syringae pv. tomato T1]
          Length = 323

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG SN +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   + ++  DP SRR +   WN
Sbjct: 121 TGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFARTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H A+ A ++V
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323


>gi|66048064|ref|YP_237905.1| thymidylate synthase [Pseudomonas syringae pv. syringae B728a]
 gi|63258771|gb|AAY39867.1| Thymidylate synthase [Pseudomonas syringae pv. syringae B728a]
          Length = 323

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLGL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323


>gi|71735199|ref|YP_276964.1| thymidylate synthase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257483848|ref|ZP_05637889.1| thymidylate synthase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289624869|ref|ZP_06457823.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289650714|ref|ZP_06482057.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|289672056|ref|ZP_06492946.1| thymidylate synthase [Pseudomonas syringae pv. syringae FF5]
 gi|298489271|ref|ZP_07007288.1| Thymidylate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|71555752|gb|AAZ34963.1| thymidylate synthase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298156235|gb|EFH97338.1| Thymidylate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320326279|gb|EFW82332.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. B076]
 gi|320331721|gb|EFW87659.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330869197|gb|EGH03906.1| thymidylate synthase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330872473|gb|EGH06622.1| thymidylate synthase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330940592|gb|EGH43640.1| thymidylate synthase [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330982261|gb|EGH80364.1| thymidylate synthase [Pseudomonas syringae pv. aptata str. DSM
           50252]
 gi|331012059|gb|EGH92115.1| thymidylate synthase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 323

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323


>gi|302188010|ref|ZP_07264683.1| thymidylate synthase [Pseudomonas syringae pv. syringae 642]
          Length = 323

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISERVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H A+ A ++V
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323


>gi|127511974|ref|YP_001093171.1| thymidylate synthase [Shewanella loihica PV-4]
 gi|166231732|sp|A3QBR4|TYSY_SHELP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|126637269|gb|ABO22912.1| thymidylate synthase [Shewanella loihica PV-4]
          Length = 283

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58
           M QYL L   +I  G     +RTG    +     + +D++   FPL+TT+K  WK  + E
Sbjct: 1   MKQYLALCERIINEGVWVENERTGKRCLTVINADLEYDVAANEFPLITTRKSFWKGAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +   + G   WD  A++              ++G +YGVQ R+W   DG
Sbjct: 61  LLGYLRGYDNAADFRKLGAKTWDANANENSAWLNNPHRKGHDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
            V+DQ+  I+ +L      R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GVVDQLRKIIDNLSKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL-QLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +        QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFALLSIVAQITGHKPGKAYHKIVNAHIYEDQLPLMQEVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP+I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PSPKLSINPDIKSLEDLETWVTMDDFEVTGYQHHEAIQYPFSV 283


>gi|330972999|gb|EGH73065.1| thymidylate synthase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 323

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H A+ A ++V
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323


>gi|104784144|ref|YP_610642.1| thymidylate synthase [Pseudomonas entomophila L48]
 gi|95113131|emb|CAK17859.1| thymidylate synthase (TS) (TSase) [Pseudomonas entomophila L48]
          Length = 323

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/323 (33%), Positives = 159/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI  G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIDNGTLQENRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105
            FLRG  N       G  +WD+ A++              +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEMAEKAGFRRIAQDEEDGQAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  +   + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP-----------NIVDLLS 241
           G+    F + +GD H+Y NH +  + Q+ R P   P+++I+                L  
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMKREPLAAPKLVISDRVPAFAKTGKYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  YE HA + A ++V
Sbjct: 301 IEPSDFSLEGYEHHAPMTAPMAV 323


>gi|330954749|gb|EGH55009.1| thymidylate synthase [Pseudomonas syringae Cit 7]
          Length = 323

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMNREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 301 IEPSDFTLEGYQHHPAMTAPMAV 323


>gi|26991817|ref|NP_747242.1| thymidylate synthase [Pseudomonas putida KT2440]
 gi|62901369|sp|Q88CN9|TYSY_PSEPK RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|24986931|gb|AAN70706.1|AE016714_4 thymidylate synthase [Pseudomonas putida KT2440]
          Length = 323

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 110/323 (34%), Positives = 158/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI  G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105
            FLRG  N       G  +WD+ A++              +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  +   + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP-----------NIVDLLS 241
           G+    F + +GD H+Y NH +  + QL R P   P+++I+                L  
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF L  YE HA + A ++V
Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323


>gi|167036181|ref|YP_001671412.1| thymidylate synthase [Pseudomonas putida GB-1]
 gi|166862669|gb|ABZ01077.1| Thymidylate synthase [Pseudomonas putida GB-1]
          Length = 323

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 110/323 (34%), Positives = 158/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI+ G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIENGTMQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105
            FLRG  N       G  +WD+ A++              +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNSAAIEMAEKAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+ LG PFN+   + L  +   + 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETKEISLTLYIRSNDLGLGTPFNLTEGAALLSLFGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP-----------NIVDLLS 241
           G+    F + +GD H+Y NH +    QL R P   P+++I+                L  
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLHEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF L  YE HA + A ++V
Sbjct: 301 IEPSDFWLEGYEHHAPMTAPMAV 323


>gi|332289795|ref|YP_004420647.1| thymidylate synthase [Gallibacterium anatis UMN179]
 gi|330432691|gb|AEC17750.1| thymidylate synthase [Gallibacterium anatis UMN179]
          Length = 283

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G    + RTG    +     + ++++   FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLDLCQRIIDEGVWVENQRTGKRCLTVIDASLTYNVADNEFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YGVQ RSW   +G
Sbjct: 61  LLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPYRKGEDDMGRVYGVQGRSWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV  L      R  I++ +N   I++  L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVNDLSKGIDDRGEILTFYNPGEIEQGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +      D QL R P 
Sbjct: 181 SCDVPLGLTFNQIQVFTFLALMAQITGHKPGKAFHKIINAHIYEDQLPLMRDEQLKREPY 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LPQ+ INP+I  L         +DF + +Y+ H AI    SV
Sbjct: 241 PLPQLEINPDIKTLEDLETWVTLDDFKVHNYQCHPAIKYPFSV 283


>gi|300312740|ref|YP_003776832.1| thymidylate synthetase [Herbaspirillum seropedicae SmR1]
 gi|300075525|gb|ADJ64924.1| thymidylate synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 323

 Score =  269 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 108/323 (33%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL++ V++ GS + +RTG+ T S  G  MRFDL KGFP +TTK++ +KSVV EL 
Sbjct: 1   MKQYQDLIQDVLENGSWQDNRTGIRTLSIPGAMMRFDLQKGFPAVTTKRLAFKSVVGELC 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD+ A+++             +LGP+YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDQNANENADWLANPFRSGADDLGPVYGVQWRQWPAYKLID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             +DQ+   + ++  +P SRR +   WN
Sbjct: 121 AAHTTQIEAARSKGFAIVSSLQDEGVEKVLLYKAVDQLRECLDTIVNNPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF      G++S  LY RS D+ LG PFN+A  + L  ++A + 
Sbjct: 181 CAVLDEVALPACHLLYQFLPNQSTGEISLCLYVRSNDIGLGTPFNLAEGAALLHLVARLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241
           G++   F + +GD H+Y NH +    QL+R+P  LPQ+ I   + +              
Sbjct: 241 GYKPRWFSYFVGDAHIYENHIDMVKEQLTRAPYPLPQLEIADRVPEFARTGRYEPQWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L +Y+ HA + A ++V
Sbjct: 301 VEPSDFSLVNYQHHAPLTAPMAV 323


>gi|326483245|gb|EGE07255.1| thymidylate synthase [Trichophyton equinum CBS 127.97]
          Length = 310

 Score =  269 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 115/292 (39%), Positives = 148/292 (50%), Gaps = 50/292 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG------------FPLLTTK 48
           HQYL+L+R +I  G  R DRTG GTRS F   Q+RF LSK              PLLTTK
Sbjct: 40  HQYLNLIRTIISTGEHRPDRTGTGTRSIFAPPQLRFSLSKPSSDPSNPDPVPVLPLLTTK 99

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV 108
           +V  ++V+ ELLWF+ G ++   L   G+ IWD     +G    +  V        D   
Sbjct: 100 RVFLRAVIAELLWFVSGCTSSLPLSEAGIKIWDG----NGSREFLDSVGLSHREVGDLGP 155

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------------- 155
           +                 R I+SAWN A + KMALPPCH   QFYV              
Sbjct: 156 V-----------------RIILSAWNPADLKKMALPPCHMFAQFYVSFPPQKAGDEGKKG 198

Query: 156 NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
            G LSC LYQRS D+ LG+PFNIASY+LLT M A       G FIHT+GD H+Y +H E 
Sbjct: 199 KGTLSCVLYQRSCDMGLGVPFNIASYALLTHMFAHAADLHPGTFIHTMGDAHVYLDHIEA 258

Query: 216 ADLQLSRSPRTLPQMIINPNIV---DLLSFRYEDFTLRSYEPHAAILAKVSV 264
              QL+R P   P + IN       ++  ++  DF +  Y+PH  I  K+S+
Sbjct: 259 LQEQLTREPTDFPTLKINRTDRGSGEMDGWKDSDFEVLDYKPHKLIKMKMSI 310


>gi|330874141|gb|EGH08290.1| thymidylate synthase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 323

 Score =  269 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAQFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQPFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H A+ A ++V
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMAV 323


>gi|225568619|ref|ZP_03777644.1| hypothetical protein CLOHYLEM_04696 [Clostridium hylemonae DSM
           15053]
 gi|225162547|gb|EEG75166.1| hypothetical protein CLOHYLEM_04696 [Clostridium hylemonae DSM
           15053]
          Length = 282

 Score =  268 bits (685), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 97/279 (34%), Positives = 134/279 (48%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++D+ R +I  G+D           D T   T   FG   R+DLSK FP LT ++   
Sbjct: 6   KVFIDMCRDIIDNGTDTKGEKVRPVWEDGTPAYTVKKFGVVNRYDLSKEFPALTLRRTGI 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS   ELLW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   + DQI
Sbjct: 66  KSCTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMGVKHQYKEGMFDQI 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166
             ++  L+ +PYSRR + + +    + +MAL PC     F V   K      L+  L QR
Sbjct: 124 DRVIYDLKHNPYSRRIMTNLYVHQDLHEMALYPCAYSMTFNVTKEKGSDRLTLNGILNQR 183

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV     +N+  YS+L  MLA V G + GEF+H + D H+Y+ H    +  ++R P  
Sbjct: 184 SQDVLAANNWNVCQYSVLLHMLAQVCGMKAGEFVHVIADAHIYDRHIPMIEELIAREPLP 243

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P   +NP I D   F  +D  L  Y  H  I    V+V
Sbjct: 244 APAFWLNPEIKDFYEFTRDDVKLIDYNTHEQIKNIPVAV 282


>gi|88797182|ref|ZP_01112772.1| thymidylate synthase [Reinekea sp. MED297]
 gi|88780051|gb|EAR11236.1| thymidylate synthase [Reinekea sp. MED297]
          Length = 283

 Score =  268 bits (685), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58
           M QYL+L + +I  G     +RTG    +     + +D+    FPL+TT+K ++K+ + E
Sbjct: 1   MKQYLELCQRIIDEGVWVENERTGKRCLTVINADLEYDVEHNQFPLITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+ +             ++G +YGVQ R+W   DG
Sbjct: 61  FLGYIRGYDNAADFRKLGARTWDANANDNQAWLNNPHRNGTDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV  L      R  I+S +N        L PC     F V +GKL    YQR
Sbjct: 121 GSVDQLQKIVDHLSKGMDDRGEILSFYNPGEFHMGCLRPCMHTHTFSVLDGKLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFFFLAIMAQITGLKPGKAYHKIVNAHIYEDQLELMRDVQLKREPY 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P+++INP+I  L         +DF++  Y+ H  I    SV
Sbjct: 241 PSPKLVINPDIRSLKDLETWVTMDDFSVEGYQHHDPIAYPFSV 283


>gi|254252890|ref|ZP_04946208.1| Thymidylate synthase [Burkholderia dolosa AUO158]
 gi|124895499|gb|EAY69379.1| Thymidylate synthase [Burkholderia dolosa AUO158]
          Length = 323

 Score =  267 bits (684), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 104/323 (32%), Positives = 158/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQEGFPAVTTKKLAFKSAIGELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP      
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P+++I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLVIADRVPDYAKTGVYGPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|290563146|ref|NP_001166836.1| thymidylate synthase isoform 2 [Bombyx mori]
 gi|87248621|gb|ABD36363.1| thymidylate synthase isoform 2 [Bombyx mori]
          Length = 255

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/228 (46%), Positives = 140/228 (61%), Gaps = 20/228 (8%)

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS---- 100
            ELLW + G ++   L   GV IWD    ++            G+LGP+YG QWR     
Sbjct: 28  EELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAK 87

Query: 101 ----WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN 156
                 DY G  IDQ+ S++ S++ +P  RR ++ AWN + + KMALPPCHCL QFYV +
Sbjct: 88  YIDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFYVAD 147

Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           GKLSC LYQRS D+ LG+PFNIASYSLLT M+A V G+Q GEFIHT GD H+Y NH E  
Sbjct: 148 GKLSCLLYQRSADMGLGVPFNIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPL 207

Query: 217 DLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +QL R P+  P +     I  +  F+YEDF ++ Y+PH  I  +++V
Sbjct: 208 KIQLQREPKQFPTLEFARKIESIDDFKYEDFIIKDYKPHPKIEMEMAV 255


>gi|284504438|ref|YP_003407153.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Marseillevirus]
 gi|282935876|gb|ADB04191.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Marseillevirus]
          Length = 444

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 110/280 (39%), Positives = 155/280 (55%), Gaps = 20/280 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL LL  V+  G  R+DRTG GTRS FG  + F ++S+ FPL+T K++ W  ++ ELLWF
Sbjct: 164 YLSLLSEVLYSGEKRKDRTGTGTRSLFGRHLLFENISEKFPLITVKRMAWGCILSELLWF 223

Query: 63  LRGDSNVSYLHRHGVSIWDEWADK-----------DGELGPIYGVQWRSWP--------D 103
           L G ++   L     +IW + + +           +G+ GPIYG QWR W         D
Sbjct: 224 LSGSTDSKMLELQNNNIWKKNSSRKFLDGRGLSYREGDCGPIYGFQWRHWGAKYVDCDTD 283

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y G   DQI SI+  ++ +  SRR ++SAWNV+ +DKM LPPCH   QFYV    + C L
Sbjct: 284 YRGQGEDQILSIISEIQNNATSRRLVLSAWNVSDLDKMCLPPCHSFSQFYVRGDFVDCHL 343

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIASY+ L  ++A   G + G    + GDVH+Y  H + A   L R 
Sbjct: 344 YQRSADLALGVPFNIASYACLLSIIAEASGKKAGNLTMSFGDVHIYETHIDNAQKMLERL 403

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           P   P++ +  +   L   +  DF L  Y    A+   ++
Sbjct: 404 PHKTPKLKVKISDNTLFCLKKGDFELDGYSCCGALQFDMA 443


>gi|206590566|emb|CAQ37528.1| probable thymidylate synthase (partial sequence c terminus) protein
           [Ralstonia solanacearum MolK2]
          Length = 415

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/182 (58%), Positives = 132/182 (72%)

Query: 83  WADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
           WAD DGELGPIYG QWRSWP   G  IDQI+ ++  ++ +P SRR IVSAWNV  I +M 
Sbjct: 234 WADADGELGPIYGYQWRSWPTPSGEHIDQIAELIAQIKRNPDSRRLIVSAWNVGDIPRMK 293

Query: 143 LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           LPPCH  FQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT M+A   G   G+F+ T
Sbjct: 294 LPPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAQQTGLDVGDFVWT 353

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
            GD HLYNNHFEQ + QL+R+P  LP++ I      +  +++EDF +  Y+ HAAI A V
Sbjct: 354 GGDCHLYNNHFEQVETQLARTPLPLPKLHIKRKPESIFDYQFEDFEIVGYQSHAAIKAPV 413

Query: 263 SV 264
           +V
Sbjct: 414 AV 415


>gi|145632282|ref|ZP_01788017.1| thymidylate synthase [Haemophilus influenzae 3655]
 gi|145634072|ref|ZP_01789783.1| thymidylate synthase [Haemophilus influenzae PittAA]
 gi|144987189|gb|EDJ93719.1| thymidylate synthase [Haemophilus influenzae 3655]
 gi|145268516|gb|EDK08509.1| thymidylate synthase [Haemophilus influenzae PittAA]
          Length = 283

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|166031149|ref|ZP_02233978.1| hypothetical protein DORFOR_00834 [Dorea formicigenerans ATCC
           27755]
 gi|166028996|gb|EDR47753.1| hypothetical protein DORFOR_00834 [Dorea formicigenerans ATCC
           27755]
          Length = 291

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 18/277 (6%)

Query: 4   YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ R +I  G+D           D+T   T   F    R+DLSK FP LT ++   KS
Sbjct: 17  FIDMCRDIIDNGTDTRGEKVRPVWEDKTPAYTVKKFCVVNRYDLSKEFPALTLRRTAIKS 76

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
              ELLW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   + DQ+  
Sbjct: 77  CTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMSVKHQYKEGMFDQVDR 134

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168
           ++  L+ +PYSRR + + +    + +M L PC     F V   +      L+  L QRS 
Sbjct: 135 VIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKEGHEKLSLNGMLNQRSN 194

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV     +N+  Y++L  MLA V   + GE +H + D H+Y+ H    +  + R P   P
Sbjct: 195 DVLTANNWNVCQYAVLLHMLAQVCDMEVGELVHVIADAHIYDRHIPLVEELIKREPLPAP 254

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           +  +NP + +   F  +D  L  YE H  I    V+V
Sbjct: 255 KFWLNPEVKNFYDFTPDDVKLIDYETHEQIKNIPVAV 291


>gi|269103430|ref|ZP_06156127.1| thymidylate synthase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268163328|gb|EEZ41824.1| thymidylate synthase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 283

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 92/283 (32%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLNLCQRIVDDGVWVENERTGKRCLTVISADLTYDVANNQFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+             D ++G +YGVQ RSW   DG
Sbjct: 61  LLGYIRGYDNAADFRALGTKTWDMNANDNQAWLNNPHRKGDDDMGRVYGVQGRSWRKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  IV  L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 STLDQLRKIVDDLSRGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTLLALMAQITGKKPGQAYHKIINAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ+ INPNI  L         +DF +  YE H  I    SV
Sbjct: 241 PSPQLKINPNIKSLEDLETWVTMDDFEVIGYEHHEPIKYPFSV 283


>gi|229844040|ref|ZP_04464181.1| thymidylate synthase [Haemophilus influenzae 6P18H1]
 gi|229813034|gb|EEP48722.1| thymidylate synthase [Haemophilus influenzae 6P18H1]
          Length = 283

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLMKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|301154747|emb|CBW14210.1| thymidylate synthetase [Haemophilus parainfluenzae T3T1]
          Length = 283

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLSRGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGNKPGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PSPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|56459618|ref|YP_154899.1| thymidylate synthase [Idiomarina loihiensis L2TR]
 gi|62901214|sp|Q5R064|TYSY_IDILO RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|56178628|gb|AAV81350.1| Thymidylate synthase [Idiomarina loihiensis L2TR]
          Length = 283

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G   + +RTG+   +     + +D++   FPL+TT+K ++KS + E
Sbjct: 1   MKQYLQLCQRIVDEGVWVKNERTGINCLTVINADLEYDVANNQFPLITTRKSYYKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG ++ +     G   WD  A+++             ++G +YGVQ RSW   DG
Sbjct: 61  LLGYLRGYNSAAQFRDIGCKTWDANANENQAWLNNPNRKGEDDMGRVYGVQGRSWQKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  ++ +L      R  IV+ +N    +   L PC     F +    L    YQR
Sbjct: 121 SHLDQLKKVINNLSKGIDDRGEIVTFYNPGEFELGCLRPCMHTHNFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y N  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFALLALVAQITGHKPGKAYHKIVNAHIYENQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  Y+ H  I    +V
Sbjct: 241 PSPQLHINPEIKSLEDIETWVSKDDFIVSGYQCHDPIKYPFAV 283


>gi|254670154|emb|CBA05192.1| Thymidylate synthase [Neisseria meningitidis alpha153]
          Length = 189

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 114/185 (61%), Positives = 137/185 (74%), Gaps = 10/185 (5%)

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           WD +   +G +GP            DG  IDQI+++V+ ++ +P SRR IVSAWN AL+D
Sbjct: 15  WDRFTATNGAVGPAP----------DGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVD 64

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
           +MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G + GEF
Sbjct: 65  EMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEF 124

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           IHT GD HLY NHFEQA+LQL R PRTLP M INP + DL SF++EDF L  Y+PH  I 
Sbjct: 125 IHTFGDAHLYRNHFEQAELQLEREPRTLPVMKINPEVKDLFSFKFEDFELEGYDPHPHIK 184

Query: 260 AKVSV 264
           A VSV
Sbjct: 185 AAVSV 189


>gi|148828083|ref|YP_001292836.1| thymidylate synthase [Haemophilus influenzae PittGG]
 gi|166231706|sp|A5UI47|TYSY_HAEIG RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|148719325|gb|ABR00453.1| thymidylate synthase [Haemophilus influenzae PittGG]
          Length = 283

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIVSEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRELGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|145641907|ref|ZP_01797481.1| thymidylate synthase [Haemophilus influenzae R3021]
 gi|145273386|gb|EDK13258.1| thymidylate synthase [Haemophilus influenzae 22.4-21]
          Length = 283

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGIDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGETLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKRAGKAYHKIVNAHIYEDQLELMRDVQLKRKPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKSLEDLETWVTMDDFKVIGYQSHEPIKYPFSV 283


>gi|307730580|ref|YP_003907804.1| thymidylate synthase [Burkholderia sp. CCGE1003]
 gi|307585115|gb|ADN58513.1| thymidylate synthase [Burkholderia sp. CCGE1003]
          Length = 323

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ASASAQLADASARGFQVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   ++L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARREISLCLYIRSNDVGLGTPFNLTEGAVLLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           GF    F + +GD H+Y N  +  + QL+R P   P + I+  + +           L  
Sbjct: 241 GFTPRWFTYFIGDAHIYENQLDMLNQQLTREPYESPTLAISERVPEYAKTGVYAPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|330961919|gb|EGH62179.1| thymidylate synthase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 322

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 105/322 (32%), Positives = 165/322 (51%), Gaps = 59/322 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG SN +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS----------- 241
           G+    F + +GD H+Y NH +  + Q++R P ++P+++I+  + +              
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYSMPKLVISDRVPEFAKTGVYQPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVS 263
               DF+L  Y+ H A+ A ++
Sbjct: 301 IEPSDFSLEGYQHHPAMTAPMA 322


>gi|85713217|ref|ZP_01044245.1| thymidylate synthase [Idiomarina baltica OS145]
 gi|85692960|gb|EAQ30930.1| thymidylate synthase [Idiomarina baltica OS145]
          Length = 283

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 90/283 (31%), Positives = 141/283 (49%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58
           M QYL L + +I  G    + RTG+   +     + +D+    FPL+TT+K ++K+ + E
Sbjct: 1   MKQYLQLCQRIIDEGEWVHNARTGINCLTVINADLEYDVEHNQFPLITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  + +     G + W+  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYLRGYDSAAQFRDIGCNTWNANANENASWLANPHRKGPDDMGRVYGVQGRAWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           +  DQ+  +V  L      R  IV+ +N   +D   L PC     F + NGKL    YQR
Sbjct: 121 SQFDQLQKVVDDLTQGIDDRGEIVTFYNPGELDMGCLRPCMHTHTFSLLNGKLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVARITGHKPGKVFHKIVNAHIYENQLELMRDVQLKREPY 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             PQ+ INP+I  L         +DF++  Y+ H  I    +V
Sbjct: 241 PSPQLHINPDIKTLQDIETWVTKDDFSIEGYQHHPPIKYPFAV 283


>gi|145638274|ref|ZP_01793884.1| thymidylate synthase [Haemophilus influenzae PittII]
 gi|148826451|ref|YP_001291204.1| thymidylate synthase [Haemophilus influenzae PittEE]
 gi|229845956|ref|ZP_04466068.1| thymidylate synthase [Haemophilus influenzae 7P49H1]
 gi|166231705|sp|A5UDH0|TYSY_HAEIE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145272603|gb|EDK12510.1| thymidylate synthase [Haemophilus influenzae PittII]
 gi|148716611|gb|ABQ98821.1| thymidylate synthase [Haemophilus influenzae PittEE]
 gi|229810960|gb|EEP46677.1| thymidylate synthase [Haemophilus influenzae 7P49H1]
 gi|309751428|gb|ADO81412.1| Thymidylate synthetase [Haemophilus influenzae R2866]
 gi|309973598|gb|ADO96799.1| Thymidylate synthetase [Haemophilus influenzae R2846]
          Length = 283

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIVSEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|154505857|ref|ZP_02042595.1| hypothetical protein RUMGNA_03398 [Ruminococcus gnavus ATCC 29149]
 gi|153793875|gb|EDN76295.1| hypothetical protein RUMGNA_03398 [Ruminococcus gnavus ATCC 29149]
          Length = 272

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 90/274 (32%), Positives = 132/274 (48%), Gaps = 18/274 (6%)

Query: 7   LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
           + R +I  G+            D T   T   FG   R+DLSK FP LT ++   KS V 
Sbjct: 1   MCRDIIDNGTSTEGEKVRPVWEDGTSAYTIKKFGIVNRYDLSKEFPALTLRRTGIKSCVD 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E+LW  +  SN   +H     IWD WAD+DG +G  YG Q +    Y   ++DQ+  ++ 
Sbjct: 61  EMLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMQVKHQYKEGMMDQVDRVIY 118

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGDVF 171
            L+ +PYSRR + + +    + +M L PC     F V   K      L+  L QRS DV 
Sbjct: 119 DLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEKDSDKLTLNGILNQRSQDVL 178

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
               +N+  Y++L  MLA V   + GEF+H + D H+Y+ H    +  + R P   P+  
Sbjct: 179 AANNWNVCQYAVLLHMLAQVCDMKVGEFVHVIADAHIYDRHIPMIEELIKREPLPAPKFW 238

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           +NP + D   F  +D  L  YE H  I    ++V
Sbjct: 239 LNPEVKDFYEFTPDDVRLDGYETHPQIKNIPIAV 272


>gi|170700986|ref|ZP_02891968.1| Thymidylate synthase [Burkholderia ambifaria IOP40-10]
 gi|170134126|gb|EDT02472.1| Thymidylate synthase [Burkholderia ambifaria IOP40-10]
          Length = 323

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+ +             +LG +YGVQWR WP      
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRVVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|163858352|ref|YP_001632650.1| thymidylate synthase [Bordetella petrii DSM 12804]
 gi|163262080|emb|CAP44382.1| thyA [Bordetella petrii]
          Length = 323

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 104/323 (32%), Positives = 159/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++ ++  GS + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLSLIQSILDHGSWQENRTGIRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            F+RG  + +     G  +WD+ A+++             +LGP+YGVQWR WP Y    
Sbjct: 61  GFMRGARSAADFRALGCKVWDQNANENANWLANPYREGPDDLGPVYGVQWRRWPAYKLLP 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             +DQ+   + ++ ++P  RR +   WN
Sbjct: 121 LANDAQIRDALGRGYAQVAQLDENGAPHVLLYKAVDQLRQCLDTIHSNPQDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y NH      QL+R P   P+++++  I D           L  
Sbjct: 241 GYTPRWFSYFIGDAHIYENHLPMLREQLTREPYEAPRLVLSDRIPDYAVTGRYEPQWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF L  Y+ H A+ A ++V
Sbjct: 301 VEPTDFALEGYQHHPALTAPMAV 323


>gi|170725592|ref|YP_001759618.1| thymidylate synthase [Shewanella woodyi ATCC 51908]
 gi|169810939|gb|ACA85523.1| Thymidylate synthase [Shewanella woodyi ATCC 51908]
          Length = 283

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   +I  G+    +RTG    +     + ++++   FPL+TT+K  WKS + E
Sbjct: 1   MKQYLDLCNRIIDEGTWIENERTGKRCLTVINADLVYNVADNEFPLITTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  MLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNSHRKGEDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L+     R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GSVDQLRKIVDNLKNGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSMLGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFALLAIVAQITGKKAGMAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
               + INP+I  L         +DF +  Y+ H AI    SV
Sbjct: 241 APASLTINPDIKSLEDLETWVTMDDFEVSGYQHHDAIKYPFSV 283


>gi|257079026|ref|ZP_05573387.1| thymidylate synthase [Enterococcus faecalis JH1]
 gi|256987056|gb|EEU74358.1| thymidylate synthase [Enterococcus faecalis JH1]
          Length = 234

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%)

Query: 82  EWADKDGELGPIYGVQWRSWPDYDGNV--IDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           E+A+K GELG IYG QWR W   DGN   IDQ++++++ ++ +P SRR IVSAWN   + 
Sbjct: 50  EFAEKYGELGNIYGAQWRHWETKDGNGSFIDQLANVIEMIKTNPDSRRLIVSAWNPEDVP 109

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
            MALPPCH +FQFYV+ GKLSCQLYQRS DVFLG+PFNIASY+LLT ++A   G   GEF
Sbjct: 110 SMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETGLAVGEF 169

Query: 200 IHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
           +HTLGD HLY NH EQ   QLSR  R+ P +++NP+   +  F  ED  +  Y+PH  I 
Sbjct: 170 VHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYDPHPTIK 229

Query: 260 AKVSV 264
           A ++V
Sbjct: 230 APIAV 234


>gi|16272842|ref|NP_439065.1| thymidylate synthase [Haemophilus influenzae Rd KW20]
 gi|145628166|ref|ZP_01783967.1| thymidylate synthase [Haemophilus influenzae 22.1-21]
 gi|145629985|ref|ZP_01785767.1| thymidylate synthase [Haemophilus influenzae R3021]
 gi|260579995|ref|ZP_05847825.1| thymidylate synthase [Haemophilus influenzae RdAW]
 gi|260581732|ref|ZP_05849529.1| thymidylate synthase [Haemophilus influenzae NT127]
 gi|319897608|ref|YP_004135805.1| thymidylate synthetase [Haemophilus influenzae F3031]
 gi|1174840|sp|P44420|TYSY_HAEIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|1573924|gb|AAC22564.1| thymidylate synthetase (thyA) [Haemophilus influenzae Rd KW20]
 gi|144979941|gb|EDJ89600.1| thymidylate synthase [Haemophilus influenzae 22.1-21]
 gi|144984266|gb|EDJ91689.1| thymidylate synthase [Haemophilus influenzae R3021]
 gi|260093279|gb|EEW77212.1| thymidylate synthase [Haemophilus influenzae RdAW]
 gi|260095325|gb|EEW79216.1| thymidylate synthase [Haemophilus influenzae NT127]
 gi|317433114|emb|CBY81488.1| thymidylate synthetase [Haemophilus influenzae F3031]
          Length = 283

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|171317124|ref|ZP_02906326.1| Thymidylate synthase [Burkholderia ambifaria MEX-5]
 gi|171097691|gb|EDT42521.1| Thymidylate synthase [Burkholderia ambifaria MEX-5]
          Length = 323

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+ +             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRVVTHFDEGGASKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|332532620|ref|ZP_08408496.1| thymidylate synthase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037836|gb|EGI74285.1| thymidylate synthase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 283

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 139/283 (49%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G    + RTG    +     + +D++   FP++TT+K ++K+ + E
Sbjct: 1   MKQYLELCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL +LRG  + +     G   WD  A+ +             ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDSAAQFREIGCKTWDANANDNNAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+S ++ +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 STLDQLSKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N  E   D+QL+R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKIANAHIYENQLELMRDVQLTREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 ASPQLKINPEIKSLEDIETWVTRDDFEVTGYQCHEAIQYPFSV 283


>gi|68249491|ref|YP_248603.1| thymidylate synthase [Haemophilus influenzae 86-028NP]
 gi|81336082|sp|Q4QM04|TYSY_HAEI8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|68057690|gb|AAX87943.1| thymidylate synthase [Haemophilus influenzae 86-028NP]
          Length = 283

 Score =  265 bits (677), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+ +             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANVNAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|167623004|ref|YP_001673298.1| thymidylate synthase [Shewanella halifaxensis HAW-EB4]
 gi|189036944|sp|B0TIU4|TYSY_SHEHH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|167353026|gb|ABZ75639.1| Thymidylate synthase [Shewanella halifaxensis HAW-EB4]
          Length = 283

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G+   + RTG    +     + +++ K  FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLDLCQRIIDEGTWVENSRTGKRCLTVINADLVYNVDKNEFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G + W+  A+ +             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRKIGCNTWNANANDNQAWLNNPHRKGVDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GTIDQLRKIVDDLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +  E   D+Q+ R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKAGTAFHKIVNAHIYEDQLELMRDVQIKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
           + P+++INP+I  L         +DF +  YE H AI    SV
Sbjct: 241 SSPKLVINPDIKSLEDLETWVTMDDFEVTGYEHHEAIKYPFSV 283


>gi|153816112|ref|ZP_01968780.1| hypothetical protein RUMTOR_02359 [Ruminococcus torques ATCC 27756]
 gi|145846597|gb|EDK23515.1| hypothetical protein RUMTOR_02359 [Ruminococcus torques ATCC 27756]
          Length = 297

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 93/279 (33%), Positives = 132/279 (47%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++D+ R +I  G+            D T   T   FG   R+DLSK FP LT ++   
Sbjct: 21  KVFIDMCRDIIDNGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLSKEFPALTLRRTAI 80

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS V ELLW  +  SN   ++     IWD WAD+ G +G  YG Q      Y    +DQ 
Sbjct: 81  KSCVDELLWIWQKKSN--NVNELKSHIWDSWADETGSIGKAYGYQMGVKHQYKEGRMDQT 138

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166
             ++  L+ +PYSRR + + +    + +M L PC     F V   K      L+  L QR
Sbjct: 139 DRVIFDLKNNPYSRRIMTNIYVHNDLHEMHLYPCAYSMTFNVTKEKDSEKLTLNAILNQR 198

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV     +N+  Y++L  MLA V G + GEF+H + D H+Y+ H    +  +SR P  
Sbjct: 199 SQDVLAANNWNVCQYAVLVHMLAQVCGMKAGEFVHVIADAHIYDRHVPMIEELISREPLP 258

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P   +NP I D   F  +D  L  YE H  I    ++V
Sbjct: 259 APTFWLNPEITDFYDFTPDDVRLDRYETHPQIKNIPIAV 297


>gi|329122919|ref|ZP_08251490.1| thymidylate synthase [Haemophilus aegyptius ATCC 11116]
 gi|301169623|emb|CBW29224.1| thymidylate synthetase [Haemophilus influenzae 10810]
 gi|327471850|gb|EGF17290.1| thymidylate synthase [Haemophilus aegyptius ATCC 11116]
          Length = 283

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKTAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN        +++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLVLMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|115351015|ref|YP_772854.1| thymidylate synthase [Burkholderia ambifaria AMMD]
 gi|115281003|gb|ABI86520.1| thymidylate synthase [Burkholderia ambifaria AMMD]
          Length = 323

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+ +             +LG IYGVQWR WP      
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDIYGVQWRQWPGYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLALVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|317502048|ref|ZP_07960230.1| thymidylate synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090436|ref|ZP_08339317.1| thymidylate synthase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896522|gb|EFV18611.1| thymidylate synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401183|gb|EGG80776.1| thymidylate synthase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 282

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 93/279 (33%), Positives = 132/279 (47%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++D+ R +I  G+            D T   T   FG   R+DLSK FP LT ++   
Sbjct: 6   KVFIDMCRDIIDNGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLSKEFPALTLRRTAI 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS V ELLW  +  SN   ++     IWD WAD+ G +G  YG Q      Y    +DQ 
Sbjct: 66  KSCVDELLWIWQKKSN--NVNELKSHIWDSWADETGSIGKAYGYQMGVKHQYKEGRMDQT 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166
             ++  L+ +PYSRR + + +    + +M L PC     F V   K      L+  L QR
Sbjct: 124 DRVIFDLKNNPYSRRIMTNIYVHNDLHEMHLYPCAYSMTFNVTKEKDSEKLTLNAILNQR 183

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV     +N+  Y++L  MLA V G + GEF+H + D H+Y+ H    +  +SR P  
Sbjct: 184 SQDVLAANNWNVCQYAVLVHMLAQVCGMKAGEFVHVIADAHIYDRHVPMIEELISREPLP 243

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P   +NP I D   F  +D  L  YE H  I    ++V
Sbjct: 244 APTFWLNPEITDFYDFTPDDVRLDRYETHPQIKNIPIAV 282


>gi|170696336|ref|ZP_02887466.1| Thymidylate synthase [Burkholderia graminis C4D1M]
 gi|170138742|gb|EDT06940.1| Thymidylate synthase [Burkholderia graminis C4D1M]
          Length = 323

 Score =  264 bits (676), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 104/323 (32%), Positives = 153/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  GS + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLDLVRTILDTGSWQENRTGIRTISMPGAVLRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AAASAQLADATARGFQVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       QL R P   P + I+  + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLAMLQEQLKREPYESPTLAISDRVPDYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|315127380|ref|YP_004069383.1| thymidylate synthase [Pseudoalteromonas sp. SM9913]
 gi|315015894|gb|ADT69232.1| thymidylate synthase [Pseudoalteromonas sp. SM9913]
          Length = 283

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G    + RTG    +     + +D++   FP++TT+K ++K+ + E
Sbjct: 1   MKQYLELCQRIVDQGQWIENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  +       G   WD  A+++             ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDSAEQFRNIGCKTWDANANENSAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ++ ++ +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKITNAHIYENQLDLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 ASPQLKINPEIKSLEDIETWVTRDDFEVVGYQCHEAIQYPFSV 283


>gi|319775163|ref|YP_004137651.1| thymidylate synthetase [Haemophilus influenzae F3047]
 gi|317449754|emb|CBY85961.1| thymidylate synthetase [Haemophilus influenzae F3047]
          Length = 283

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+ +             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANVNAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKRAGKAYHKIVNAHIYEDQLELMRDVQLKRKPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKSLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|172060020|ref|YP_001807672.1| thymidylate synthase [Burkholderia ambifaria MC40-6]
 gi|171992537|gb|ACB63456.1| Thymidylate synthase [Burkholderia ambifaria MC40-6]
          Length = 323

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+ +             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANDNAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDCAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|33594075|ref|NP_881719.1| putative thymidylate synthase [Bordetella pertussis Tohama I]
 gi|62901354|sp|Q7VUE3|TYSY_BORPE RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|33564149|emb|CAE43421.1| putative thymidylate synthase [Bordetella pertussis Tohama I]
 gi|332383492|gb|AEE68339.1| thymidylate synthase [Bordetella pertussis CS]
          Length = 323

 Score =  264 bits (675), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 106/323 (32%), Positives = 161/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G+ + +RTGV T S  G  +RFDL +GFP +TTKK+ +KS + E++
Sbjct: 1   MKQYLDLVQSILDQGAWQENRTGVRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD+ A+++             +LGP+YGVQWR WP Y    
Sbjct: 61  GFLRATRSAAQFRALGCKVWDQNANENEQWLANPYREGPDDLGPVYGVQWRHWPAYKLLP 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             +DQ+   + ++R  P  RR +   WN
Sbjct: 121 SSAGGQVADALARGYRQVAEVDENGAPHVLLYKAVDQLRQCLDTIRQSPGDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF  + G  ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNAGTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241
           G++   F + +GD H+Y NH      QL+R P   PQ++++  I D              
Sbjct: 241 GYKPRWFSYFIGDAHVYENHLPMLREQLAREPYPAPQLVLSDRIPDFAVTGKYEPQWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ HA + A ++V
Sbjct: 301 VEPGDFTLSGYQHHAPLTAPMAV 323


>gi|119469927|ref|ZP_01612732.1| thymidylate synthase [Alteromonadales bacterium TW-7]
 gi|119446637|gb|EAW27910.1| thymidylate synthase [Alteromonadales bacterium TW-7]
          Length = 283

 Score =  264 bits (675), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G    + RTG    +     + +D++   FP++TT+K ++K+ + E
Sbjct: 1   MKQYLKLCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  +       G   WD  A+ +             ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDSAEQFREIGCKTWDANANDNQAWLNNPNRKGEDDMGRVYGVQGRGWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ++ ++ +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIITFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAYHKIANAHIYENQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             P + INPNI  L         +DF +  Y+ H AI    SV
Sbjct: 241 ESPTLTINPNIKSLEDIETWVTRDDFEVTGYQCHDAIQYPFSV 283


>gi|145636964|ref|ZP_01792628.1| thymidylate synthase [Haemophilus influenzae PittHH]
 gi|145269822|gb|EDK09761.1| thymidylate synthase [Haemophilus influenzae PittHH]
          Length = 283

 Score =  264 bits (675), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIVSEGEWVANERTGKHCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++ G  N +     G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIHGYDNAADFRALGTKTWDANANENAAWLANPHRRGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLTKGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPKLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|325577728|ref|ZP_08148003.1| thymidylate synthase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160473|gb|EGC72599.1| thymidylate synthase [Haemophilus parainfluenzae ATCC 33392]
          Length = 283

 Score =  264 bits (675), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL R ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIVNEGEWVANERTGKRCLTVINADLEYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENAAWLANPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKIVNNLSRGIDDRGEILTFFNPGEFDLGCLRPCMHTHTFSLVGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGNKSGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PSPQLEINPDIKTLEDLETWVTMDDFKVVGYQSHEPIKYPFSV 283


>gi|295677229|ref|YP_003605753.1| thymidylate synthase [Burkholderia sp. CCGE1002]
 gi|295437072|gb|ADG16242.1| thymidylate synthase [Burkholderia sp. CCGE1002]
          Length = 323

 Score =  264 bits (675), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 158/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP      
Sbjct: 61  GFLRASRSAADFRELGCKVWDGNANQNAQWLANPYREGPDDLGDVYGVQWRKWPAYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ASASAQLADAQARGFRVITQFDEDGRSKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTRREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P++ I+  + D           L  
Sbjct: 241 GYTPRWFSYFIGDAHIYENQLDMLQQQLKREPYESPRLAISDRVPDYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ H  + A +++
Sbjct: 301 IEPADFSLVGYQHHEPLTAPMAI 323


>gi|261868754|ref|YP_003256676.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261414086|gb|ACX83457.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 283

 Score =  264 bits (675), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL R +I  G     +RTG    +     + +D+ +  FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCRRIIDEGVWVENERTGKRCLTVINANLTYDVVNNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ RSW   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++ +N    D   L PC     F + +  L    YQR
Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTNTFSLLDDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAFHQIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P + INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PSPTLEINPDIKSLADLETWVTMDDFKVTGYQCHEPIKYPFSV 283


>gi|183597807|ref|ZP_02959300.1| hypothetical protein PROSTU_01136 [Providencia stuartii ATCC 25827]
 gi|188022562|gb|EDU60602.1| hypothetical protein PROSTU_01136 [Providencia stuartii ATCC 25827]
          Length = 283

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + +I  G    + RTGV   +     + +D++   FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLELCQRIIDEGQWVENKRTGVRCLTVINADLEYDVANNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  + +     G + W+  A+++             ++G +YGVQ RSW   DG
Sbjct: 61  LLGYLRGYDSAAQFREIGCNTWNANANENQAWLNNPHRKGEDDMGRVYGVQGRSWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  +V +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 SHLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            LP + INP I  L         +DFTL  Y+ H AI    +V
Sbjct: 241 PLPSLSINPQIKTLEDIETWVSTDDFTLEGYQCHEAIKYPFTV 283


>gi|197334528|ref|YP_002155215.1| thymidylate synthase [Vibrio fischeri MJ11]
 gi|197316018|gb|ACH65465.1| thymidylate synthase [Vibrio fischeri MJ11]
          Length = 283

 Score =  264 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D++ G FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCKRIVDEGTWIENERTGKRCLTVINADLTYDVANGQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDG 106
           ++ ++RG  N     + G   WD                 D ++G +YGVQ R+W   +G
Sbjct: 61  MIGYIRGYDNAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRAWAKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  I+  L      R  I++ +N    D   L PC     F +    L     QR
Sbjct: 121 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G+  H + + H+Y +  E    +QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQNVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 241 QAPIFKINPEIKSLEDLETWVTMDDFEVIGYESHDAIKYPFSV 283


>gi|226327104|ref|ZP_03802622.1| hypothetical protein PROPEN_00969 [Proteus penneri ATCC 35198]
 gi|225204322|gb|EEG86676.1| hypothetical protein PROPEN_00969 [Proteus penneri ATCC 35198]
          Length = 283

 Score =  264 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + +I  G    + RTG    +     + +D++   FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLALCQRIIDEGQWIDNKRTGTRCLTVINADLEYDVANNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           LL +LRG  N       G + W+  A+++G            ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDNAGQFREIGCNTWNANANENGAWLNNPHRKGEDDMGRVYGVQGRQWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           +  DQ+  ++ +L      R  IV+ +N    +   L PC     F +    L    YQR
Sbjct: 121 SHFDQLRKVIDNLTKGIDDRGEIVTFYNPGETELGCLRPCMHTHTFSLVGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAFHKIINAHIYENQLPLMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP + INP I  L         +DFT+  Y+ H AI    +V
Sbjct: 241 PLPTLHINPKIKTLEDIETWVTTDDFTVEGYQCHEAIKYPFTV 283


>gi|197286164|ref|YP_002152036.1| thymidylate synthase [Proteus mirabilis HI4320]
 gi|227357284|ref|ZP_03841641.1| thymidylate synthase [Proteus mirabilis ATCC 29906]
 gi|194683651|emb|CAR44584.1| putative thymidylate synthase [Proteus mirabilis HI4320]
 gi|227162547|gb|EEI47536.1| thymidylate synthase [Proteus mirabilis ATCC 29906]
          Length = 283

 Score =  264 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + +I  G    + RTG    +     + +D++   FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLALCQRIIDEGEWIDNKRTGTRCLTVINADLEYDVANNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+++             ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDNAAQFRAIGCNTWNANANENSAWLNNPHRKGEDDMGRVYGVQGRQWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           +  DQ+  +V +L      R  IV+ +N        L PC     F +   +L    YQR
Sbjct: 121 SHFDQLRKVVDNLTNGIDDRGEIVTFYNPGETALGCLRPCMHTHTFSLLGDRLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKPGKAFHKIVNAHIYENQLPLMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INPNI  L         +DF++  Y+ H AI    +V
Sbjct: 241 PLPKLHINPNIKTLDDIETWVTTDDFSVEGYQCHEAIKYPFTV 283


>gi|167758813|ref|ZP_02430940.1| hypothetical protein CLOSCI_01156 [Clostridium scindens ATCC 35704]
 gi|167663553|gb|EDS07683.1| hypothetical protein CLOSCI_01156 [Clostridium scindens ATCC 35704]
          Length = 282

 Score =  264 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 94/279 (33%), Positives = 131/279 (46%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++D+ R +I  G+D           D T   T   FG   R+DLSK FP LT ++   
Sbjct: 6   KVFIDMCRDIIDHGTDTRGEKVRPVWEDGTPAYTIKKFGVVNRYDLSKEFPALTLRRTAI 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS   ELLW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   + DQ+
Sbjct: 66  KSCTDELLWIWQKKSN--DIHELHSHIWDSWADEDGLIGKAYGYQMGVKHKYKEGMFDQV 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQR 166
             ++  L+ +PYSRR + + +    + +M L PC     F V          L+  L QR
Sbjct: 124 DRVIYDLKHNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEQRSDRLTLNGILNQR 183

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV     +N+  Y++L  MLA V   Q GEF+H + D H+Y+ H    +  + R P  
Sbjct: 184 SNDVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHVPMIEELIKREPLP 243

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P+  +NP I D   F   D  L  YE H  I    V+V
Sbjct: 244 APKFWLNPEIKDFYQFTRNDVKLIGYETHEQIKDIPVAV 282


>gi|293390604|ref|ZP_06634938.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951138|gb|EFE01257.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 283

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R +I  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCRRIIDEGVWVENERTGKRCLTVINANLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ RSW   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++ +N    D   L PC     F + +  L    YQR
Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLDDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAFHQIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P + INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PSPTLEINPDIKSLADLETWVTMDDFKVTGYQCHEPIKYPFSV 283


>gi|167563581|ref|ZP_02356497.1| thymidylate synthase [Burkholderia oklahomensis EO147]
          Length = 323

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDAGTWQNNRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRAKRSAADFRALGCKVWDANANENAQWLANPYRRGEDDLGDVYGVQWRRWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AQADAQIADATSRGFRVVARFEEGGARKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLEIAERVPDCAKTGQYEPEWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|315633683|ref|ZP_07888973.1| thymidylate synthase [Aggregatibacter segnis ATCC 33393]
 gi|315477725|gb|EFU68467.1| thymidylate synthase [Aggregatibacter segnis ATCC 33393]
          Length = 283

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCQRIVNEGVWVENERTGKRCLTVINAGLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ RSW   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRSWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAFHHIVNAHIYEDQLALMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PSPQLEINPDIKSLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283


>gi|325262065|ref|ZP_08128803.1| thymidylate synthase [Clostridium sp. D5]
 gi|324033519|gb|EGB94796.1| thymidylate synthase [Clostridium sp. D5]
          Length = 282

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 93/279 (33%), Positives = 135/279 (48%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++ + R +I+ G+            D     T   FG   R+DL K FP LT ++   
Sbjct: 6   KVFIGMCRDIIENGTSTEGEKVRPVWEDGAPAYTVKRFGVVNRYDLRKEFPALTLRRTGI 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS V ELLW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   ++DQ+
Sbjct: 66  KSCVDELLWIWQKKSN--NIHELNSHIWDSWADEDGSIGKAYGYQMGVKHQYREGMMDQV 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQR 166
             ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QR
Sbjct: 124 DRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKENNSDKLTLNAILNQR 183

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV     +N+  Y++L  MLA V G Q GEF+H + D H+Y+ H    +  +SR P  
Sbjct: 184 SQDVLAANNWNVCQYAVLVHMLAQVCGMQVGEFVHVIADAHIYDRHIPLIEELISREPFP 243

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            PQ  +NP + D   F  +D  L +YE H  I    ++V
Sbjct: 244 APQFWLNPEVKDFYDFTTDDVRLDNYETHPQIKNIPIAV 282


>gi|167570744|ref|ZP_02363618.1| thymidylate synthase [Burkholderia oklahomensis C6786]
          Length = 323

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDAGTWQNNRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRAKRSAADFRALGCKVWDANANENAQWLANPYRRGEDDLGDVYGVQWRCWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRVVARFEEGGARKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLEIAERVPDCAKTGQYEPEWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|157374274|ref|YP_001472874.1| thymidylate synthase [Shewanella sediminis HAW-EB3]
 gi|189036946|sp|A8FSC3|TYSY_SHESH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157316648|gb|ABV35746.1| Thymidylate synthase [Shewanella sediminis HAW-EB3]
          Length = 283

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYL+L   +I  G+    +RTG    +     + +++ +  FPL+TT+K  WKS + E
Sbjct: 1   MKQYLELCNRIIDEGTWIENERTGKRCLTVINADLTYNVGNNEFPLITTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L ++RG  N +     G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  MLGYIRGYDNAADFRALGAKTWDANANENQVWLNNPHRKGVDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L+A    R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GTVDQLKKIVDNLKAGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVYTLLALIAQITGKKPGMAYHKIVNAHIYEDQLALMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
               + INP+I  L         +DF +  Y+ H AI    SV
Sbjct: 241 EPASLSINPDIKSLEDLETWVTMDDFEVSGYQHHEAIKYPFSV 283


>gi|153854663|ref|ZP_01995913.1| hypothetical protein DORLON_01909 [Dorea longicatena DSM 13814]
 gi|149752767|gb|EDM62698.1| hypothetical protein DORLON_01909 [Dorea longicatena DSM 13814]
          Length = 282

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 91/280 (32%), Positives = 136/280 (48%), Gaps = 20/280 (7%)

Query: 2   HQYLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++++ R +I  G+D           D T   T   FG   R+DLSK FP LT ++   
Sbjct: 6   KVFINMCRDIIDNGTDTRGEKVRPVWEDGTPAYTIKKFGVVNRYDLSKEFPALTLRRTAI 65

Query: 53  KSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQ 111
           KS   ELLW  +   +N++ LH     IWD WAD++G +G  YG Q      Y   + DQ
Sbjct: 66  KSCTDELLWIWQQKSNNINDLH---SHIWDSWADENGSIGKAYGYQMGVKHQYKEGMFDQ 122

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQ 165
           +  ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L Q
Sbjct: 123 VDRVIYDLKNNPYSRRIMTNIYVHEDLHEMNLYPCAYSMTFNVTKKPGHDKLTLNAILNQ 182

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DV     +N+  Y++L  MLA V   + GEF+H + D H+Y+ H    +  +SR P 
Sbjct: 183 RSNDVLAANNWNVCQYAVLIHMLAQVCDMEVGEFVHVIADAHIYDRHVPMIEELISRKPL 242

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
             P+  +NP + D   F  +D  L  Y+ H  I    V+V
Sbjct: 243 PAPKFWLNPEVKDFYQFTRDDVKLIDYQTHDQIKNIPVAV 282


>gi|254973707|ref|ZP_05270179.1| thymidylate synthase [Clostridium difficile QCD-66c26]
 gi|255091097|ref|ZP_05320575.1| thymidylate synthase [Clostridium difficile CIP 107932]
 gi|255312752|ref|ZP_05354335.1| thymidylate synthase [Clostridium difficile QCD-76w55]
 gi|255515512|ref|ZP_05383188.1| thymidylate synthase [Clostridium difficile QCD-97b34]
 gi|255648605|ref|ZP_05395507.1| thymidylate synthase [Clostridium difficile QCD-37x79]
 gi|260681823|ref|YP_003213108.1| thymidylate synthase [Clostridium difficile CD196]
 gi|260685420|ref|YP_003216553.1| thymidylate synthase [Clostridium difficile R20291]
 gi|306518729|ref|ZP_07405076.1| thymidylate synthase [Clostridium difficile QCD-32g58]
 gi|260207986|emb|CBA60142.1| thymidylate synthase [Clostridium difficile CD196]
 gi|260211436|emb|CBE01538.1| thymidylate synthase [Clostridium difficile R20291]
          Length = 276

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 12/271 (4%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+  ++++ G             D     T   F    R+DLSK FP+LT +  + K+
Sbjct: 8   FIDMCNNILENGVSSDGEVVRAKWDDGQPAHTIKKFCVVNRYDLSKEFPILTLRPTNLKA 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            + ELLW  +  SN   ++     IWD WAD+ G +G  YG Q      Y     DQI  
Sbjct: 68  AIDELLWIWQKKSN--NINDLNSRIWDSWADETGSIGKAYGYQIGQKHKYKEGEFDQIDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
           ++  L+ +PYSRR I + +N   +++M L PC     F V   +L+  L QRS D+ +  
Sbjct: 126 VIYDLKYNPYSRRIITNIYNHNDLNEMNLYPCAYSMTFNVTGNRLNAILNQRSNDILVAN 185

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
            +N+  Y++L  MLA +   + GE +H + D H+Y+ H       ++R     P++IINP
Sbjct: 186 NWNVTQYAILVHMLAQISDLEVGELVHVIADAHIYDRHIPLVKELINRESYDAPKLIINP 245

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAI-LAKVSV 264
           NI +   FR EDFTL +Y+    I    V++
Sbjct: 246 NIKNFYDFRVEDFTLENYKSGPQIKKIPVAI 276


>gi|161525388|ref|YP_001580400.1| thymidylate synthase [Burkholderia multivorans ATCC 17616]
 gi|189349875|ref|YP_001945503.1| thymidylate synthase [Burkholderia multivorans ATCC 17616]
 gi|221201301|ref|ZP_03574341.1| thymidylate synthase [Burkholderia multivorans CGD2M]
 gi|221206245|ref|ZP_03579258.1| thymidylate synthase [Burkholderia multivorans CGD2]
 gi|221213524|ref|ZP_03586498.1| thymidylate synthase [Burkholderia multivorans CGD1]
 gi|160342817|gb|ABX15903.1| Thymidylate synthase [Burkholderia multivorans ATCC 17616]
 gi|189333897|dbj|BAG42967.1| thymidylate synthase [Burkholderia multivorans ATCC 17616]
 gi|221166313|gb|EED98785.1| thymidylate synthase [Burkholderia multivorans CGD1]
 gi|221173554|gb|EEE05988.1| thymidylate synthase [Burkholderia multivorans CGD2]
 gi|221179151|gb|EEE11558.1| thymidylate synthase [Burkholderia multivorans CGD2M]
          Length = 323

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP      
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AHADAQLADAQRRGFRIVTRFDEDGAQKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P+++I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPRLVIADRVPEYAKTGVYEPEWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|258539604|ref|YP_003174103.1| thymidylate synthase [Lactobacillus rhamnosus Lc 705]
 gi|257151280|emb|CAR90252.1| Thymidylate synthase [Lactobacillus rhamnosus Lc 705]
          Length = 256

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 112/256 (43%), Positives = 148/256 (57%), Gaps = 50/256 (19%)

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWA---------------------------------- 84
           +LWFL GD+N+ +L +H   IWDEWA                                  
Sbjct: 1   MLWFLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHE 60

Query: 85  ----------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128
                            K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR 
Sbjct: 61  EMAKFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRL 120

Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
           IVSAWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++
Sbjct: 121 IVSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLV 180

Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFT 248
           A   G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  
Sbjct: 181 AHECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIK 240

Query: 249 LRSYEPHAAILAKVSV 264
           L +Y+P+ AI A V+V
Sbjct: 241 LLNYDPYPAIKAPVAV 256


>gi|221133983|ref|ZP_03560288.1| thymidylate synthase [Glaciecola sp. HTCC2999]
          Length = 283

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDR-RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QY DL + +I  G     +RTG    +     + ++++   FPL+TT+K  +K+ + E
Sbjct: 1   MRQYEDLCQRIIDEGEWVYNERTGKRCLTLINADLEYNVADNEFPLVTTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+++             ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDNAADFRAIGCNTWNANANENSAWLNNPHRKGEDDMGRVYGVQGRRWMTPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+ SIV  L     SR  I++ +N    +   L PC     F +  GKL    +QR
Sbjct: 121 REIDQLKSIVDDLSKGIDSRGEILTFYNPGEFEYGCLRPCMHTHHFSLLGGKLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S D+ LGI FN     +L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SADIPLGINFNQVQVFVLLALMAQITGHKPGKAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP I  L         +DF +  YE H  I    +V
Sbjct: 241 PAPKLTINPKIKTLADIETWVTTDDFKVEGYECHEPIKYPFAV 283


>gi|90412457|ref|ZP_01220460.1| thymidylate synthase [Photobacterium profundum 3TCK]
 gi|90326494|gb|EAS42900.1| thymidylate synthase [Photobacterium profundum 3TCK]
          Length = 283

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 92/283 (32%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G    + RT     +     + FD++   FPL+TT+K  WKS + E
Sbjct: 1   MKQYLELCQRIVDDGVWIENKRTNKRCLTVVNADLTFDVANNQFPLITTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+ +             ++G +YGVQ RSW   DG
Sbjct: 61  LLGYIRGYDNAADFRALGTKTWDMNANDNLAWLNNPHRKGEDDMGRVYGVQGRSWQKSDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 STIDQLRKIVDNLSEGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +      D+QL+R+P 
Sbjct: 181 SCDVPLGLNFNQVQVYTLLALMAQITGKKPGLAYHKIINAHIYEDQLPLLRDVQLTRTPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++IINP I  L         +DF +  YE H AI    SV
Sbjct: 241 ASPKLIINPKIKSLEDLETWVTMDDFEVIGYEHHEAIKYPFSV 283


>gi|77359700|ref|YP_339275.1| thymidylate synthase [Pseudoalteromonas haloplanktis TAC125]
 gi|123587148|sp|Q3IDN1|TYSY_PSEHT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|76874611|emb|CAI85832.1| thymidylate synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 283

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G    + RTG    +     + +D++   FP++TT+K ++K+ + E
Sbjct: 1   MKQYLQLCQRIVDEGQWVENKRTGTRCLTVINADLEYDVANNQFPMITTRKSYYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  + +     G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYLRGYDSAAQFREIGCKTWDANANENSAWLNNPHRKGEDDMGRVYGVQGRAWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ++ ++ +L+     R  I+S +N    +   L PC     F +    L     QR
Sbjct: 121 STLDQLAKVINNLKNGIDDRGEIISFYNPGEFELGCLRPCMHTHTFSLLGDTLYLTSIQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALVAQITGHKAGKAYHKITNAHIYENQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             PQ+ INPNI  L         +DF +  YE H AI    SV
Sbjct: 241 ASPQLKINPNIKSLNDIETWVTRDDFEVTGYECHEAIQYPFSV 283


>gi|149192450|ref|ZP_01870644.1| thymidylate synthase [Vibrio shilonii AK1]
 gi|148833716|gb|EDL50759.1| thymidylate synthase [Vibrio shilonii AK1]
          Length = 283

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDEGVWIENERTGKRCLTVINADLTYDVANNAFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLSKGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 AAPTFRINPKIKTLEDLETWVTLDDFEVEGYECHEPIRYPFSV 283


>gi|251791893|ref|YP_003006613.1| thymidylate synthase [Aggregatibacter aphrophilus NJ8700]
 gi|247533280|gb|ACS96526.1| thymidylate synthase [Aggregatibacter aphrophilus NJ8700]
          Length = 283

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCQRIVDEGVWIENERTGKRCLTVINASLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNPHRKGTDDMGRVYGVQGRNWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 EHLDQLRKIVNNLSKGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAFHHIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PSPQLEINPDIKSLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283


>gi|167586578|ref|ZP_02378966.1| Thymidylate synthase [Burkholderia ubonensis Bu]
          Length = 323

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 104/323 (32%), Positives = 157/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP      
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPHRQGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AGADAQIADATGRGFRIVARFDEDGAPKVLLYKAIDQLRECLDTIMQDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFVGDAHIYENQLDMLQQQLAREPYESPRLAIADRVPEYAQTGVYAPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|71658760|sp|Q5E7P1|TYSY_VIBF1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 283

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D+  G FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDEGTWIENERTGKRCLTVINADLTYDVENGVFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDG 106
           ++ ++RG  +     + G   WD                 D ++G +YGVQ RSW   +G
Sbjct: 61  MIGYIRGYDSAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRSWAKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  I+  L      R  I++ +N    D   L PC     F +    L     QR
Sbjct: 121 EFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G+  H + + H+Y +  E    +QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQSVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 241 QAPIFKINPEIKSLEDLETWVTMDDFEVIGYESHEAIKYPFSV 283


>gi|33595476|ref|NP_883119.1| putative thymidylate synthase [Bordetella parapertussis 12822]
 gi|33599861|ref|NP_887421.1| putative thymidylate synthase [Bordetella bronchiseptica RB50]
 gi|62901355|sp|Q7W1A9|TYSY_BORPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901356|sp|Q7WP13|TYSY_BORBR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|33565554|emb|CAE40196.1| putative thymidylate synthase [Bordetella parapertussis]
 gi|33567458|emb|CAE31371.1| putative thymidylate synthase [Bordetella bronchiseptica RB50]
          Length = 323

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 160/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G+ + +RTGV T S  G  +RFDL +GFP +TTKK+ +KS + E++
Sbjct: 1   MKQYLDLVQSILDQGAWQENRTGVRTLSLPGAALRFDLQQGFPAVTTKKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD+ A+++             +LGP+YGVQWR WP Y    
Sbjct: 61  GFLRATRSAAQFRALGCKVWDQNANENEQWLANPYREGPDDLGPVYGVQWRHWPAYKLLP 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             +DQ+   + ++   P  RR +   WN
Sbjct: 121 RSAGGQVADALARGYRQVAEVAENGAPHVLLYKAVDQLRQCLDTIHQSPGDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNG--KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF  + G  ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNAGTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241
           G++   F + +GD H+Y NH      QL+R P   PQ++++  I D              
Sbjct: 241 GYKPRWFSYFIGDAHVYENHLPMLREQLTREPYPAPQLVLSDRIPDFAVTGKYEPQWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ HA + A ++V
Sbjct: 301 VEPGDFTLSGYQHHAPLTAPMAV 323


>gi|206561247|ref|YP_002232012.1| thymidylate synthase [Burkholderia cenocepacia J2315]
 gi|198037289|emb|CAR53211.1| putative thymidylate synthase [Burkholderia cenocepacia J2315]
          Length = 323

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 104/323 (32%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  GS + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGSWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP      
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|323526913|ref|YP_004229066.1| thymidylate synthase [Burkholderia sp. CCGE1001]
 gi|323383915|gb|ADX56006.1| thymidylate synthase [Burkholderia sp. CCGE1001]
          Length = 323

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 155/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGAAAQLADASARGFRVVTEFDENGSRKVLLYKAIDQLRQCLDTIMQNPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVARREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P + I+  + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLAREPYDSPTLAISDRVPDYAQTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLIGYRHHEPLTAPMAV 323


>gi|152997743|ref|YP_001342578.1| thymidylate synthase [Marinomonas sp. MWYL1]
 gi|189036938|sp|A6W1R4|TYSY_MARMS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|150838667|gb|ABR72643.1| Thymidylate synthase [Marinomonas sp. MWYL1]
          Length = 283

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G    + RTG    +     + +D+SKG FPL+TT+K +WKS + E
Sbjct: 1   MKQYLDLCNRIVNEGEWVSNERTGKRCLTVINADLTYDVSKGEFPLVTTRKSYWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           ++ +LRG  N +     G   WD  A+++             ++G  YG   R++P  DG
Sbjct: 61  IIGYLRGYDNAADFRALGTKTWDANANENEVWLNSPYRKGEDDMGLCYGAIGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID +  I+  L     +R  I++ ++        L PC     F +    L     QR
Sbjct: 121 GHIDLLKQIIDDLSRGVDNRGEILTFYHPGAFHMACLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVLLAIVAQITGKKPGKAFHKIVNAHIYEDQLELMRDVQLKREPY 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP + INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPTLKINPEIKSLKDIETWVTMDDFEIEGYQFHEPIAYPFSV 283


>gi|167856338|ref|ZP_02479067.1| thymidylate synthase [Haemophilus parasuis 29755]
 gi|167852534|gb|EDS23819.1| thymidylate synthase [Haemophilus parasuis 29755]
          Length = 283

 Score =  262 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G     +RTG    +     + +D++KG FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLTYDVAKGAFPLVTTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P   G
Sbjct: 61  LLGYIRGYDNAADFRQLGTKSWDANANENAAWLANPHRKGEDDMGLVYGAVGRNFPKVGG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++        L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A + G Q G+  H + + H+Y +  E   D+QL R+P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGLQAGQAFHKIVNAHIYEDQLELMRDVQLKRTPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P + INP+I  L          DF +  YE H +I    SV
Sbjct: 241 KAPTLKINPDIKSLEDLETWVTLADFEVEGYEYHPSIQYPFSV 283


>gi|325522963|gb|EGD01399.1| thymidylate synthase [Burkholderia sp. TJI49]
          Length = 323

 Score =  262 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP      
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIIENPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNAAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPDYAKTGVYAPEWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|218133162|ref|ZP_03461966.1| hypothetical protein BACPEC_01024 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992035|gb|EEC58039.1| hypothetical protein BACPEC_01024 [Bacteroides pectinophilus ATCC
           43243]
          Length = 275

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 82/272 (30%), Positives = 132/272 (48%), Gaps = 11/272 (4%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++D+   +I  G             D +   T   FG   R+DLS+ FP++T ++  +
Sbjct: 6   KVFIDMCNDIIDNGYSTEGEKVRPKWDDGSYAYTIKKFGVVNRYDLSREFPIMTLRRTAF 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS + E+LW  +  SN   +      IWDEWAD++G +G  YG Q      Y   ++DQ+
Sbjct: 66  KSCIDEILWIWQKKSN--NIKDLNSHIWDEWADENGSIGKAYGYQLGVRHQYKEGMMDQV 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
             ++  L+ +PYSRR + + +    + +M L PC     F V   KL+  L QRS D+  
Sbjct: 124 DRVLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTGNKLNAILNQRSNDILT 183

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMII 232
              +N+  Y++L  M+A V G + GE +H + D H+Y+ H       + R     P   +
Sbjct: 184 ANNWNVVQYAVLVHMIAQVSGLEAGELVHVIADAHIYDRHIPLVKELIKRQTYDAPVFRM 243

Query: 233 NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           NP++ D   F  +DF L  Y+    I   V+V
Sbjct: 244 NPDVKDFYEFTVDDFELEDYKYGTQIKIPVAV 275


>gi|323492567|ref|ZP_08097713.1| thymidylate synthase [Vibrio brasiliensis LMG 20546]
 gi|323313169|gb|EGA66287.1| thymidylate synthase [Vibrio brasiliensis LMG 20546]
          Length = 283

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N       G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRNLGTKTWDANANQNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 241 KAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDAIKYPFSV 283


>gi|268590564|ref|ZP_06124785.1| thymidylate synthase [Providencia rettgeri DSM 1131]
 gi|291313951|gb|EFE54404.1| thymidylate synthase [Providencia rettgeri DSM 1131]
          Length = 283

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M  YLDL + +I  G    + RTGV   +     + +D+ +  FPL+TT+K  +K+ + E
Sbjct: 1   MKPYLDLCQRIIDEGQWVENKRTGVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+++             ++G +YGVQ RSW   DG
Sbjct: 61  LLGYLRGYDNAAQFREIGCNTWNANANENQAWLNNPYRKGEDDMGRVYGVQGRSWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  +V +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 THLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARISGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             P ++INP I  L         +DFTL  Y+ H AI    +V
Sbjct: 241 ASPSLVINPKIQSLEDLETWVTSDDFTLEGYQCHEAIKYPFTV 283


>gi|71279358|ref|YP_270289.1| thymidylate synthase [Colwellia psychrerythraea 34H]
 gi|123774868|sp|Q47Y31|TYSY_COLP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|71145098|gb|AAZ25571.1| thymidylate synthase [Colwellia psychrerythraea 34H]
          Length = 283

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M  YLDL + +I  G+    +RTG    +     + +++ +  FPL+TT+K  +KS + E
Sbjct: 1   MRAYLDLCQRIIDQGTWVENERTGKRCLTVINADLEYNVGNNEFPLITTRKSFFKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDG 106
            + ++RG  + +   + G   WD                 + ++G +YG+Q R+W   DG
Sbjct: 61  FIGYIRGYDSAADFRKLGTKTWDANANLNDAWLNNTHRKGEDDMGRVYGIQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L+     R  I++ +N        L PC     F +    L    +QR
Sbjct: 121 GTIDQLKKIVDNLKDGIDDRAEIMTFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL-QLSRSPR 225
           S DV LG+ FN     +   ++A + G + G   H + + H+Y +        QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFVFLALMAQITGKKAGMAYHKIVNAHIYEDQLPLMKEVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++IINP I  L         +DF +  YE H AI    +V
Sbjct: 241 ALPKLIINPEIKSLEDLETWVTMDDFKVEGYECHEAIKYPFAV 283


>gi|78065671|ref|YP_368440.1| thymidylate synthase [Burkholderia sp. 383]
 gi|77966416|gb|ABB07796.1| thymidylate synthase [Burkholderia sp. 383]
          Length = 323

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP      
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 AGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLELVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEIAERVPEYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLTAPMAV 323


>gi|90580564|ref|ZP_01236369.1| thymidylate synthase [Vibrio angustum S14]
 gi|90438222|gb|EAS63408.1| thymidylate synthase [Photobacterium angustum S14]
          Length = 286

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 18/280 (6%)

Query: 3   QYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           QY +L + VI  G     +RTG    +     + +DLSK  FPL+TT+K  WKS + E+L
Sbjct: 7   QYENLCKRVIDEGVWIENERTGKRCLTIINADLEYDLSKNEFPLVTTRKAFWKSAIAEML 66

Query: 61  WFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDGNV 108
            +LRG  N +     G   WD                 + ++G +YGVQ R+W   DG  
Sbjct: 67  GYLRGYDNAADFRNIGTKTWDANANLNEAWLNNSHRKGEDDMGRVYGVQGRAWAKPDGGF 126

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           +DQ   I+ +L      R  I+S +NV       L PC     F +    L     QRS 
Sbjct: 127 VDQYKKIIGNLSKGIDDRGEIMSFYNVGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQRSC 186

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV LG+ FN    + L  + A + G + G+  H + + H+Y +  +    Q+ R P + P
Sbjct: 187 DVPLGLVFNQIQVAWLLQITAQICGLKAGKAFHKIVNAHIYEDQLDLMKEQIKREPYSSP 246

Query: 229 QMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
           ++I+NP I  L         +DF +  Y  H  I    +V
Sbjct: 247 KLIMNPKIKSLEDLETWVTVDDFEVIDYRHHEPIKYPFAV 286


>gi|113461755|ref|YP_719824.1| thymidylate synthase [Haemophilus somnus 129PT]
 gi|170718531|ref|YP_001783740.1| thymidylate synthase [Haemophilus somnus 2336]
 gi|123132252|sp|Q0I563|TYSY_HAES1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|189036936|sp|B0UWT7|TYSY_HAES2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|112823798|gb|ABI25887.1| thymidylate synthase [Haemophilus somnus 129PT]
 gi|168826660|gb|ACA32031.1| Thymidylate synthase [Haemophilus somnus 2336]
          Length = 283

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + +I  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MRQYLNLCQRIIDQGHWVENERTGKRCLTVINADLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENQAWLNNPVRKGTDDMGRVYGVQGRRWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++ +N   ID   L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVNNLSKGIDDRGEILTFFNPGEIDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y + FE   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAYHKIINAHIYEDQFELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP+I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PLPRLEINPDIKTLEDLETWVTMDDFKVIGYQCHEAIKYPFSV 283


>gi|212711211|ref|ZP_03319339.1| hypothetical protein PROVALCAL_02283 [Providencia alcalifaciens DSM
           30120]
 gi|212686379|gb|EEB45907.1| hypothetical protein PROVALCAL_02283 [Providencia alcalifaciens DSM
           30120]
          Length = 283

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G    + RT V   +     + +D+ +  FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLELCQRILDEGQWVENKRTNVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+++             ++G +YGVQ RSW   DG
Sbjct: 61  LLGYLRGYDNAAQFREIGCNTWNANANENQAWLDNPHRKGEDDMGRVYGVQGRSWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  +V +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 SHLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL+R P 
Sbjct: 181 SCDVPLGLNFNQVQCFVLLALMARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLTREPY 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P + INP I  L         +DFTL  Y+ H AI    +V
Sbjct: 241 PSPNLTINPEIKTLEDIETWVTTDDFTLEGYQCHEAIKYPFTV 283


>gi|107022163|ref|YP_620490.1| thymidylate synthase [Burkholderia cenocepacia AU 1054]
 gi|116689108|ref|YP_834731.1| thymidylate synthase [Burkholderia cenocepacia HI2424]
 gi|170732396|ref|YP_001764343.1| thymidylate synthase [Burkholderia cenocepacia MC0-3]
 gi|254245954|ref|ZP_04939275.1| Thymidylate synthase [Burkholderia cenocepacia PC184]
 gi|105892352|gb|ABF75517.1| thymidylate synthase [Burkholderia cenocepacia AU 1054]
 gi|116647197|gb|ABK07838.1| thymidylate synthase [Burkholderia cenocepacia HI2424]
 gi|124870730|gb|EAY62446.1| Thymidylate synthase [Burkholderia cenocepacia PC184]
 gi|169815638|gb|ACA90221.1| Thymidylate synthase [Burkholderia cenocepacia MC0-3]
          Length = 323

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP      
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ANADAQIADATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPRLEIAERVPEYAKTGVYAPEWLEQ 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAV 323


>gi|328462355|gb|EGF34425.1| thymidylate synthase [Lactobacillus rhamnosus MTCC 5462]
          Length = 255

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 111/255 (43%), Positives = 147/255 (57%), Gaps = 50/255 (19%)

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWA----------------------------------- 84
           +WFL GD+N+ +L +H   IWDEWA                                   
Sbjct: 1   MWFLHGDTNIRFLLQHKNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEE 60

Query: 85  ---------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
                           K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR I
Sbjct: 61  MAKFDDKVLHDDDFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLI 120

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           VSAWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A
Sbjct: 121 VSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVA 180

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
              G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L
Sbjct: 181 HECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKL 240

Query: 250 RSYEPHAAILAKVSV 264
            +Y+P+ AI A V+V
Sbjct: 241 LNYDPYPAIKAPVAV 255


>gi|254509415|ref|ZP_05121496.1| thymidylate synthase [Vibrio parahaemolyticus 16]
 gi|219547652|gb|EED24696.1| thymidylate synthase [Vibrio parahaemolyticus 16]
          Length = 283

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 132/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + +++ G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVEHGEWIENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INPNI  L         +DF +  YE H AI    SV
Sbjct: 241 KAPTFHINPNIKSLEDLETWVTLDDFWVEGYEHHDAIKYPFSV 283


>gi|89072546|ref|ZP_01159118.1| thymidylate synthase [Photobacterium sp. SKA34]
 gi|89051650|gb|EAR57103.1| thymidylate synthase [Photobacterium sp. SKA34]
          Length = 283

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 90/283 (31%), Positives = 132/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLALCQRIVDEGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+ +             ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDNAAQFRAIGCNTWNANANDNPAWLNNPHRKGEDDMGRVYGVQGRRWQKTDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +  E   D+QL R+P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKRTPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  YE H  I    SV
Sbjct: 241 ASPQLKINPKIKSLEDLETWVTLDDFEVVGYEHHDPIQYPFSV 283


>gi|293607661|ref|ZP_06689993.1| thymidylate synthase [Achromobacter piechaudii ATCC 43553]
 gi|292813946|gb|EFF73095.1| thymidylate synthase [Achromobacter piechaudii ATCC 43553]
          Length = 323

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 156/323 (48%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  GS + +RTG+ T S  G  +RFDL KGFP +TTKK+ +KS + E++
Sbjct: 1   MKQYLDLVQSILDTGSWQENRTGIRTISMPGASLRFDLQKGFPAVTTKKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD+ A+++             +LGP+YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRELGCKVWDQNANENSQWLANPYREGPDDLGPVYGVQWRQWPAYKLLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             +DQ+   + ++   P  RR +   WN
Sbjct: 121 ASRPGQLEDALSRGYSKVADLEEGGVPKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241
           G+    F + +GD H+Y NH      QL+R P   P+++++  I D              
Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTREPYESPRLVLSDRIPDFAVTGRYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  HA + A ++V
Sbjct: 301 VEPSDFSLSGYTHHAPLTAPMAV 323


>gi|238026573|ref|YP_002910804.1| thymidylate synthase [Burkholderia glumae BGR1]
 gi|237875767|gb|ACR28100.1| Thymidylate synthase [Burkholderia glumae BGR1]
          Length = 323

 Score =  261 bits (667), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 154/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  GS + +RTGV T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGSWQENRTGVRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANENAAWLANPYRTGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AQATAQLEDALARGYRIVTRFDEAGAQKLLLHKAIDQLRDCLDTIMRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
              ++++ALP CH L+QF   +   ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PVKLEEIALPACHLLYQFLPNLAKREISLCLYIRSNDVGLGTPFNLAEGAALLELVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+Q   F + +GD H+Y N  +    QL R P   P++ I   + D           L  
Sbjct: 241 GYQPRWFSYFIGDAHIYENQLDMLRQQLEREPYESPRLEIAERVPDYAKTGVYAPEWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  HA + A ++V
Sbjct: 301 IEPADFTLAGYRHHAPLSAPMAV 323


>gi|167522878|ref|XP_001745776.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775577|gb|EDQ89200.1| predicted protein [Monosiga brevicollis MX1]
          Length = 398

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 97/243 (39%), Positives = 137/243 (56%), Gaps = 45/243 (18%)

Query: 66  DSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP--------DYD 105
           ++N + L    V IWD    KD            G+LGP+YG QWR +         DY 
Sbjct: 33  NTNANDLAARDVHIWDANGSKDFLEKQGLGHREEGDLGPVYGFQWRHFGAEYKDMHTDYS 92

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
           G  +DQ++ +++ ++ +P SRR I+SAWN   I KMALPPCH + QFYV +G+LSCQLYQ
Sbjct: 93  GQGVDQLAEVIEQIKTNPDSRRIIMSAWNPLDIPKMALPPCHTMCQFYVCDGELSCQLYQ 152

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS D+ LG+PFNIASY+LLT M+A V G + G+F+HT+GD H+Y NH +  + QL R PR
Sbjct: 153 RSADMGLGVPFNIASYALLTYMIAQVTGLKPGDFVHTIGDAHVYLNHVDALEEQLKREPR 212

Query: 226 TLPQMIINPNIVD-------------------------LLSFRYEDFTLRSYEPHAAILA 260
             P +    +I +                         +  F++EDF L+ Y+PH  I  
Sbjct: 213 PFPTLSFKRDIEEYVHAFGQHVTNPLEHRPTAALLSLGIDDFKFEDFDLQGYKPHNRIAM 272

Query: 261 KVS 263
            ++
Sbjct: 273 DMA 275


>gi|134295116|ref|YP_001118851.1| thymidylate synthase [Burkholderia vietnamiensis G4]
 gi|134138273|gb|ABO54016.1| thymidylate synthase [Burkholderia vietnamiensis G4]
          Length = 323

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 155/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLR   + +     G  +WD  A+ +             +LG +YGVQWR WP      
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANDNAQWLANPYRRGVDDLGDVYGVQWRQWPGYKVLD 120

Query: 103 ---------------------DYDG-------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                D DG         IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ASADAQIADATRRGFRIVTQFDEDGAPKVLLYKAIDQLRQCLDTIIENPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNAAKREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYDSPRLEIAERVPDYAKTGVYAPEWLEL 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPSDFSLVGYRHHEPLSAPMAV 323


>gi|212636535|ref|YP_002313060.1| thymidylate synthase [Shewanella piezotolerans WP3]
 gi|226713172|sp|B8CQK7|TYSY_SHEPW RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|212558019|gb|ACJ30473.1| Thymidylate synthetase (thyA), putative [Shewanella piezotolerans
           WP3]
          Length = 283

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + +I  G+   + RTG    +     + + + K  FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLELCQRIIDEGTWVENSRTGKRCLTVINADLVYHVDKNEFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L ++RG  N +     G   WD  A+ +             ++G +YGVQ R W   DG
Sbjct: 61  MLGYIRGYDNAADFRNIGAKTWDANANDNQAWLNNPHRKGADDMGRVYGVQGRGWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GSIDQLRKIVDNLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +  E    +QL RSP 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGHKAGTAYHKIVNAHIYEDQLELMQSVQLKRSPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP+I  L         +DF +  YE H  I    SV
Sbjct: 241 PSPQLSINPDIKSLEDLETWVTMDDFEVTGYEHHEGIRYPFSV 283


>gi|53720080|ref|YP_109066.1| thymidylate synthase [Burkholderia pseudomallei K96243]
 gi|53724744|ref|YP_102198.1| thymidylate synthase [Burkholderia mallei ATCC 23344]
 gi|67642871|ref|ZP_00441622.1| thymidylate synthase [Burkholderia mallei GB8 horse 4]
 gi|76811492|ref|YP_334325.1| thymidylate synthase [Burkholderia pseudomallei 1710b]
 gi|121599317|ref|YP_993825.1| thymidylate synthase [Burkholderia mallei SAVP1]
 gi|124384034|ref|YP_001026887.1| thymidylate synthase [Burkholderia mallei NCTC 10229]
 gi|126450390|ref|YP_001079826.1| thymidylate synthase [Burkholderia mallei NCTC 10247]
 gi|126454374|ref|YP_001067140.1| thymidylate synthase [Burkholderia pseudomallei 1106a]
 gi|167002756|ref|ZP_02268546.1| thymidylate synthase [Burkholderia mallei PRL-20]
 gi|167739605|ref|ZP_02412379.1| thymidylate synthase [Burkholderia pseudomallei 14]
 gi|167816807|ref|ZP_02448487.1| thymidylate synthase [Burkholderia pseudomallei 91]
 gi|167825213|ref|ZP_02456684.1| thymidylate synthase [Burkholderia pseudomallei 9]
 gi|167846713|ref|ZP_02472221.1| thymidylate synthase [Burkholderia pseudomallei B7210]
 gi|167903685|ref|ZP_02490890.1| thymidylate synthase [Burkholderia pseudomallei NCTC 13177]
 gi|167911934|ref|ZP_02499025.1| thymidylate synthase [Burkholderia pseudomallei 112]
 gi|217421016|ref|ZP_03452521.1| thymidylate synthase [Burkholderia pseudomallei 576]
 gi|237813246|ref|YP_002897697.1| thymidylate synthase [Burkholderia pseudomallei MSHR346]
 gi|242317181|ref|ZP_04816197.1| thymidylate synthase [Burkholderia pseudomallei 1106b]
 gi|254177043|ref|ZP_04883700.1| thymidylate synthase [Burkholderia mallei ATCC 10399]
 gi|254181135|ref|ZP_04887733.1| thymidylate synthase [Burkholderia pseudomallei 1655]
 gi|254191996|ref|ZP_04898496.1| thymidylate synthase [Burkholderia pseudomallei Pasteur 52237]
 gi|254195598|ref|ZP_04902025.1| thymidylate synthase [Burkholderia pseudomallei S13]
 gi|254203878|ref|ZP_04910238.1| thymidylate synthase [Burkholderia mallei FMH]
 gi|254208859|ref|ZP_04915207.1| thymidylate synthase [Burkholderia mallei JHU]
 gi|254259968|ref|ZP_04951022.1| thymidylate synthase [Burkholderia pseudomallei 1710a]
 gi|254295668|ref|ZP_04963126.1| thymidylate synthase [Burkholderia pseudomallei 406e]
 gi|254360085|ref|ZP_04976355.1| thymidylate synthase [Burkholderia mallei 2002721280]
 gi|52210494|emb|CAH36477.1| putative thymidylate synthase [Burkholderia pseudomallei K96243]
 gi|52428167|gb|AAU48760.1| thymidylate synthase [Burkholderia mallei ATCC 23344]
 gi|76580945|gb|ABA50420.1| thymidylate synthase [Burkholderia pseudomallei 1710b]
 gi|121228127|gb|ABM50645.1| thymidylate synthase [Burkholderia mallei SAVP1]
 gi|124292054|gb|ABN01323.1| thymidylate synthase [Burkholderia mallei NCTC 10229]
 gi|126228016|gb|ABN91556.1| thymidylate synthase [Burkholderia pseudomallei 1106a]
 gi|126243260|gb|ABO06353.1| thymidylate synthase [Burkholderia mallei NCTC 10247]
 gi|147745390|gb|EDK52470.1| thymidylate synthase [Burkholderia mallei FMH]
 gi|147750735|gb|EDK57804.1| thymidylate synthase [Burkholderia mallei JHU]
 gi|148029325|gb|EDK87230.1| thymidylate synthase [Burkholderia mallei 2002721280]
 gi|157805557|gb|EDO82727.1| thymidylate synthase [Burkholderia pseudomallei 406e]
 gi|157987818|gb|EDO95583.1| thymidylate synthase [Burkholderia pseudomallei Pasteur 52237]
 gi|160698084|gb|EDP88054.1| thymidylate synthase [Burkholderia mallei ATCC 10399]
 gi|169652344|gb|EDS85037.1| thymidylate synthase [Burkholderia pseudomallei S13]
 gi|184211674|gb|EDU08717.1| thymidylate synthase [Burkholderia pseudomallei 1655]
 gi|217396428|gb|EEC36445.1| thymidylate synthase [Burkholderia pseudomallei 576]
 gi|237504707|gb|ACQ97025.1| thymidylate synthase [Burkholderia pseudomallei MSHR346]
 gi|238524079|gb|EEP87514.1| thymidylate synthase [Burkholderia mallei GB8 horse 4]
 gi|242140420|gb|EES26822.1| thymidylate synthase [Burkholderia pseudomallei 1106b]
 gi|243061578|gb|EES43764.1| thymidylate synthase [Burkholderia mallei PRL-20]
 gi|254218657|gb|EET08041.1| thymidylate synthase [Burkholderia pseudomallei 1710a]
          Length = 323

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGAQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       QL R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323


>gi|83720929|ref|YP_442217.1| thymidylate synthase [Burkholderia thailandensis E264]
 gi|167581100|ref|ZP_02373974.1| thymidylate synthase [Burkholderia thailandensis TXDOH]
 gi|167619181|ref|ZP_02387812.1| thymidylate synthase [Burkholderia thailandensis Bt4]
 gi|257138410|ref|ZP_05586672.1| thymidylate synthase [Burkholderia thailandensis E264]
 gi|83654754|gb|ABC38817.1| thymidylate synthase [Burkholderia thailandensis E264]
          Length = 323

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 155/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAAEFRALGCKVWDANANENAQWLANPYRRGADDLGDVYGVQWRRWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRIVARFEEGGADKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P++ +   + D           L  
Sbjct: 241 GYSPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLELAERVPDYAKTGKYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 VEPSDFTLVGYRHHEPLSAPMAV 323


>gi|126440677|ref|YP_001059852.1| thymidylate synthase [Burkholderia pseudomallei 668]
 gi|167720616|ref|ZP_02403852.1| thymidylate synthase [Burkholderia pseudomallei DM98]
 gi|126220170|gb|ABN83676.1| thymidylate synthase [Burkholderia pseudomallei 668]
          Length = 323

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       QL R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323


>gi|209522037|ref|ZP_03270694.1| Thymidylate synthase [Burkholderia sp. H160]
 gi|209497520|gb|EDZ97718.1| Thymidylate synthase [Burkholderia sp. H160]
          Length = 323

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 100/323 (30%), Positives = 155/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDGNANQNAQWLANPYREGPDDLGDVYGVQWRKWPAYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ASASAQLADAQARGFRVITQFDEEGRSKVLLYKAIDQLRQCLDTIIENPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V   ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNVTRREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P++ I+  + +           L  
Sbjct: 241 GYTPRWFSYFIGDAHIYENQLDMLHQQLKREPYESPRLAISDRVPEYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A +++
Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAI 323


>gi|326536377|ref|YP_004300818.1| Td thymidylate synthase [Acinetobacter phage 133]
 gi|299483458|gb|ADJ19552.1| Td thymidylate synthase [Acinetobacter phage 133]
          Length = 315

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 114/315 (36%), Positives = 159/315 (50%), Gaps = 51/315 (16%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M  YLDL+R+V+  G D  D RTGVGT + FG Q++ DL KGFP +TTK++ +KSV  E+
Sbjct: 1   MKSYLDLMRNVLDNGEDVDDERTGVGTIALFGEQLKIDLRKGFPAVTTKRLAFKSVTAEM 60

Query: 60  LWFLRGDSNVSYLHR-----------HGVSIWDEWADKD---------GELGPIYGVQWR 99
           LWFLRG +++  L                +IWD    +          G +GP+YG  WR
Sbjct: 61  LWFLRGSNDLFELRAITHGESARYDADKKTIWDANYYQQAEKELGYTAGYMGPVYGNVWR 120

Query: 100 SWP-----------------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI---- 138
            +                  +Y+    DQI +++     +P SRR +  AW+   +    
Sbjct: 121 EFGQGTIRIERGDTKVESYDEYEVTGFDQIKAVLNEAIKNPGSRRLLTLAWDPKSVWGHD 180

Query: 139 ------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
                 DK  LPPCH  FQ  ++NG +      RS DVFLG PF+IASY+ L  +   ++
Sbjct: 181 DKYVKQDKPTLPPCHYGFQININNGHIDLLFLMRSVDVFLGKPFDIASYAELCHVFGRIL 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF---RYEDFTL 249
           G      I   G+VH+Y NH +Q   QLSR P+ LP + INP +  L  F     +DF L
Sbjct: 241 GKTPRYLIGQFGNVHIYKNHIDQCLEQLSREPKKLPTLWINPELKTLDDFEKATVDDFKL 300

Query: 250 RSYEPHAAILAKVSV 264
             YE H  I A ++V
Sbjct: 301 IGYESHPNIKADMAV 315


>gi|187477016|ref|YP_785040.1| thymidylate synthase [Bordetella avium 197N]
 gi|115421602|emb|CAJ48112.1| thymidylate synthase [Bordetella avium 197N]
          Length = 323

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 161/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ +I  G+ + +RTGV T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MRQYLDLVQSIIDQGAWQENRTGVRTLSLPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD+ A+++             +LGP+YGVQWR+WP Y    
Sbjct: 61  GFLRSARSAADFRALGCKVWDQNANENSQWLNNPYREGLDDLGPVYGVQWRNWPAYKLLR 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             +DQ+   + ++  +P  RR +   WN
Sbjct: 121 ADRQAQISDALSRGYAKVAELDEAGVPQVLLYKAVDQLRQCLDTIHRNPSDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNASTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS---FRYE---- 245
           G+    F + +GD H+Y NH +    QL R P   P+++++  I D      +  E    
Sbjct: 241 GYTPRWFSYFIGDAHIYENHLDMLREQLKREPHASPRLLLSDRIPDFRQTQRYEPEWLEH 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y+ HA + A ++V
Sbjct: 301 VEPSDFSLEGYQHHAPLTAPMAV 323


>gi|332975745|gb|EGK12627.1| thymidylate synthase [Psychrobacter sp. 1501(2011)]
          Length = 283

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +++ +  FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLDLCQRIVDEGVWVENERTGKRCLTVINADLNYNVGANEFPLVTTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  + +     G + W+  A+++             ++G +YGVQ R W +  G
Sbjct: 61  LLGYLRGYDSAAQFRAIGCNTWNANANENEAWLANPYRKGKDDMGRVYGVQGRRWRNSVG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
              DQ+  I  +LR     R  I++ +N        L PC     F +  GKL     QR
Sbjct: 121 EEFDQLHKIYDNLRNGIDDRGEILTFYNPGEFHMGCLRPCMHTHTFSLLGGKLYLTSSQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG  FN      L  ++A + G + G+  H + + H+Y +  +   D+QL R P 
Sbjct: 181 SCDVPLGQNFNQIQVFTLLALMAQITGHEAGKAYHKIVNAHIYEDQLQLMRDVQLKREPY 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP I  L         +DF +  Y+ H +I    SV
Sbjct: 241 PAPKLHINPEIKSLEDIETWVTLDDFRVEGYQYHESIAYPFSV 283


>gi|225027000|ref|ZP_03716192.1| hypothetical protein EUBHAL_01256 [Eubacterium hallii DSM 3353]
 gi|224955685|gb|EEG36894.1| hypothetical protein EUBHAL_01256 [Eubacterium hallii DSM 3353]
          Length = 276

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 14/272 (5%)

Query: 4   YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+   +I+ G             D T   T   FG   R+DLSK FP +T +K + +S
Sbjct: 8   FIDMCSDIIENGYSTEGEKVRPKWPDGTYAYTIKKFGVVNRYDLSKEFPAITLRKTYIRS 67

Query: 55  VVHELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + E+LW  +   +NV  L      IWDEWAD+DG +G  YG Q      Y    +DQ+ 
Sbjct: 68  AIDEILWIWQKKSNNVHDLS---SHIWDEWADEDGSIGKAYGYQLGKKHKYKEGEMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P+SRR + + +    + +M L PC     F V   +L+  L QRS D+   
Sbjct: 125 RVLFDLKENPFSRRIMTNIYVHEDLHEMNLYPCAYSMTFNVTGNRLNAILNQRSQDILAA 184

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
             +N+  Y+ L MM A V GF+ GE +H + D H+Y+ H       + R     P++ +N
Sbjct: 185 NNWNVVQYAALLMMFAQVSGFEPGELVHVIADAHIYDRHIPIVKELIQRPVYPAPKVTLN 244

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           P + D   F  +DFT+  YE    I    +++
Sbjct: 245 PEVKDFYKFTVDDFTIEDYEAGPQIKNIPIAI 276


>gi|294139696|ref|YP_003555674.1| thymidylate synthase [Shewanella violacea DSS12]
 gi|293326165|dbj|BAJ00896.1| thymidylate synthase [Shewanella violacea DSS12]
          Length = 283

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 85/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L   +I  G+    +RTG    +     + +++    FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLELCNRIIDEGTWIENERTGKRCLTVINADLVYNVENNEFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L ++RG  N +   + G   WD  A+ +             ++G +YGVQ R+W   DG
Sbjct: 61  MLGYIRGFDNAADFRKLGAKTWDANANDNLAWLNNPHRKGQDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L+     R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GTIDQLKKIVDNLKKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGKKPGQAYHKIVNAHIYEDQLDLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
               + INP+I  L         +DF + +Y+ H AI    SV
Sbjct: 241 GPASLSINPDIKSLEDLETWVTMDDFEVSNYQHHDAIKYPFSV 283


>gi|119944280|ref|YP_941960.1| thymidylate synthase [Psychromonas ingrahamii 37]
 gi|166231727|sp|A1SS96|TYSY_PSYIN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|119862884|gb|ABM02361.1| thymidylate synthase [Psychromonas ingrahamii 37]
          Length = 283

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G    + RTG    +     + +D+ +  FP++TT+K  +KS + E
Sbjct: 1   MKQYLGLCQRIVDKGIWIENQRTGKRCLTVINADLEYDVGNNQFPMITTRKSFYKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           L+ +LRG  N +   + G   WD  ++ +             ++G +YG+Q RSW   DG
Sbjct: 61  LIGYLRGYDNAADFRKLGTKTWDANSNLNNAWLNNPYRKGEDDMGRVYGIQGRSWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  +V  L      R  IV+ +N    +   L PC     F +    L    YQR
Sbjct: 121 GFIDQLKKVVDDLSNGIDDRGEIVTFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFALLALMAQITGKKAGMAYHKIVNAHIYEDQLALMRDVQLPRLPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 ASPQLKINPKIKSLQDLETWVTMDDFEVEGYQCHDAIKYPFSV 283


>gi|163752421|ref|ZP_02159613.1| thymidylate synthase [Shewanella benthica KT99]
 gi|161327680|gb|EDP98872.1| thymidylate synthase [Shewanella benthica KT99]
          Length = 283

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L   +I  G     +RTG    +     + +++ K  FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLELCNRIIDEGCWIENERTGKRCLTVINADLVYNVEKNEFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  MLGYIRGFDNAADFRKLGAKTWDANANENQAWLNNPHRKGKDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L+     R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GTIDQLKKIVDNLKKGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGKKPGQAYHKIVNAHIYEDQLELMRDVQLQREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
               + INP+I  L         +DF + +Y+ H AI    SV
Sbjct: 241 GPASLSINPDIKSLEDLETWVTMDDFEVLNYQHHDAIKYPFSV 283


>gi|157960852|ref|YP_001500886.1| thymidylate synthase [Shewanella pealeana ATCC 700345]
 gi|189036945|sp|A8H1B4|TYSY_SHEPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157845852|gb|ABV86351.1| Thymidylate synthase [Shewanella pealeana ATCC 700345]
          Length = 283

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 90/283 (31%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G+   + RTG    +     + + + K  FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLDLCQRLIDEGTWVENSRTGKRCLTVINADLVYHVDKNEFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G + W+  A+ +             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRAIGCNTWNANANDNQAWLDNPHRKGIDDMGRVYGVQGRAWSKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I+S +N        L PC     F +    L    +QR
Sbjct: 121 GCIDQLRKIVDDLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLVGDTLHLTSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL-QLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +  E     QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALMAQITGHKPGTAFHKIVNAHIYEDQLELMQEVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
           T P+++INPNI  L         +DF +  YE H AI    SV
Sbjct: 241 TSPKLVINPNIKSLEDLETWVSIDDFEVTGYEHHEAISYPFSV 283


>gi|148978525|ref|ZP_01814977.1| thymidylate synthase [Vibrionales bacterium SWAT-3]
 gi|145962314|gb|EDK27595.1| thymidylate synthase [Vibrionales bacterium SWAT-3]
          Length = 283

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDNGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  +     + G   WD  ++             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDSAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H L + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEAIKYPFSV 283


>gi|330447405|ref|ZP_08311054.1| thymidylate synthase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491596|dbj|GAA05551.1| thymidylate synthase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 283

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 90/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLALCQRIVDDGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+ +             ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDNAAQFRAIGCNTWNANANDNQAWLNNPHRKGEDDMGRVYGVQGRRWQKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTLLALIAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  YE H  I    SV
Sbjct: 241 ASPQLKINPKIKSLEDLETWVTLDDFEVIGYEHHDVIQYPFSV 283


>gi|134094287|ref|YP_001099362.1| thymidylate synthase [Herminiimonas arsenicoxydans]
 gi|133738190|emb|CAL61235.1| thymidylate synthase (TS) (TSase) [Herminiimonas arsenicoxydans]
          Length = 324

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 104/324 (32%), Positives = 162/324 (50%), Gaps = 60/324 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
           M QYLDL+R V+  G+ + +RTG+ T S  G  +RFDL   GFP +TTK++ +KSV+ EL
Sbjct: 1   MKQYLDLVRTVLDSGTWQENRTGIRTISIPGAMLRFDLQKDGFPAITTKRLAFKSVIGEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD-- 105
           + FLR   + +     G  +WD+ A+++             +LGP+YGVQWR WP Y   
Sbjct: 61  IGFLRASRSAAEFRALGCKVWDQNANENAEWLNNPYRLGEDDLGPVYGVQWRQWPAYKLL 120

Query: 106 --------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAW 133
                                              IDQ+   + ++  +P SRR +   W
Sbjct: 121 DADNKLQIQDAQKRGFRLISAVNDEGIDKVLMYKAIDQLRDCLDTIINNPASRRILFHGW 180

Query: 134 NVALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           N A +D +ALP CH L+QF       ++S  LY RS D+ LG PFN+A  + L  ++  +
Sbjct: 181 NCAELDAIALPACHLLYQFLPNQTTKEISLCLYIRSNDIGLGTPFNLAEAAALLHVVGRL 240

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LL 240
            G+    F + +GD H+Y NH +  + Q++R P   P+++++  I D           L 
Sbjct: 241 TGYTPKWFTYFIGDAHIYENHLDMLNEQMTREPYAAPRLVLSDRIPDYRVTGKYEPEWLE 300

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
                DF+L +Y+ HA + A ++V
Sbjct: 301 KLEPGDFSLENYQHHAPLSAPMAV 324


>gi|219871597|ref|YP_002475972.1| thymidylate synthase [Haemophilus parasuis SH0165]
 gi|254790239|sp|B8F6S2|TYSY_HAEPS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|219691801|gb|ACL33024.1| thymidylate synthase [Haemophilus parasuis SH0165]
          Length = 283

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G     +RTG    +     + +D++KG FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLTYDVAKGEFPLVTTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P   G
Sbjct: 61  LLGYIRGYDNAADFRQLGTKSWDANANENAAWLTNPHRKGEDDMGLVYGAVGRNFPKVGG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++        L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A + G Q G+  H + + H+Y +  E   D+QL R+P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHQAGQAFHKIVNAHIYEDQLELMRDVQLKRTPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P + INP+I  L          DF +  YE H +I    SV
Sbjct: 241 KAPTLKINPDIKSLEDLETWVTLADFEVEGYEYHPSIQYPFSV 283


>gi|86147416|ref|ZP_01065729.1| thymidylate synthase [Vibrio sp. MED222]
 gi|218708561|ref|YP_002416182.1| thymidylate synthase [Vibrio splendidus LGP32]
 gi|254790257|sp|B7VJ78|TYSY_VIBSL RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|85834844|gb|EAQ52989.1| thymidylate synthase [Vibrio sp. MED222]
 gi|218321580|emb|CAV17532.1| Thymidylate synthase [Vibrio splendidus LGP32]
          Length = 283

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVNDGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  ++             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H L + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H AI    SV
Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEAIKYPFSV 283


>gi|254362290|ref|ZP_04978403.1| thymidylate synthase [Mannheimia haemolytica PHL213]
 gi|261492795|ref|ZP_05989342.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494839|ref|ZP_05991317.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153093867|gb|EDN74799.1| thymidylate synthase [Mannheimia haemolytica PHL213]
 gi|261309550|gb|EEY10775.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311477|gb|EEY12633.1| thymidylate synthase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 283

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + +D+ KG FPL+TT++ +WK+ + E
Sbjct: 1   MKQYLDLCNRIVSEGKWVANERTGKHCLTVINADLTYDVEKGEFPLVTTRRSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG SN +   + G   WD  A+++             ++G +YG   R++P  DG
Sbjct: 61  LLGYIRGYSNAADFRQLGTKSWDANANENAQWLANPYRKGEDDMGLVYGAVGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++        L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKKGIDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P++IINP+I  L         +DF +  YE H AI    SV
Sbjct: 241 NAPKLIINPDIKSLEDLETWVSLDDFKVEGYEYHPAIQYPFSV 283


>gi|18000048|gb|AAL54880.1|AF064791_1 thymidylate synthase [Pasteurella multocida]
          Length = 283

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M  YL+L + ++  G     +RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKHYLELCQRIVDEGVWVENERTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENSAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +LR     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVNNLRNGIDDRGEIMTFFNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  +    +QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIINAHIYEDQLDLMKNVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LPQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PLPQLHINPEIKTLEDLETWVTMDDFKVTGYQCHDAIKYPFSV 283


>gi|332308159|ref|YP_004436010.1| thymidylate synthase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175488|gb|AEE24742.1| thymidylate synthase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 283

 Score =  259 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G    + RTG    +     + +D++KG FPL+TT+K  +KS + E
Sbjct: 1   MKQYLDLCQRIVDEGVWVNNERTGKKCLTVINADLTYDVAKGEFPLVTTRKSFYKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           ++ ++RG  N +   + G S WD  A+++             + G IYG   R++P  DG
Sbjct: 61  MIGYIRGYDNAADFRKIGTSTWDANANQNQAWLDNPHRRGEDDCGLIYGKIGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID ++ I+  L+     R  I + ++        L PC     F + +  L     QR
Sbjct: 121 GSIDLLAKIIHDLKNGIDDRGEIFTFYHPGAFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGKKAGKAYHKIVNAHIYEDQLALMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            +P++IINP+I  L         +DF +  YE H AI    SV
Sbjct: 241 GIPKLIINPDIKSLKDLETWVTMDDFNIEGYEHHPAIKYPFSV 283


>gi|59711067|ref|YP_203843.1| thymidylate synthase [Vibrio fischeri ES114]
 gi|59479168|gb|AAW84955.1| thymidylate synthetase [Vibrio fischeri ES114]
          Length = 285

 Score =  259 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 19/282 (6%)

Query: 2   HQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL + ++  G+    +RTG    +     + +D+  G FPL+TT+K  WK+ V E+
Sbjct: 4   KQYLDLCQRIVDEGTWIENERTGKRCLTVINADLTYDVENGVFPLVTTRKSFWKAAVAEM 63

Query: 60  LWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDGN 107
           + ++RG  +     + G   WD                 D ++G +YGVQ RSW   +G 
Sbjct: 64  IGYIRGYDSAEDFRKIGTKTWDANANLNDAWLNNPHRKGDDDMGRVYGVQGRSWAKPNGE 123

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQ+  I+  L      R  I++ +N    D   L PC     F +    L     QRS
Sbjct: 124 FVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDMGCLRPCMYSHHFSLLGDTLYLNSTQRS 183

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPRT 226
            DV LG+ FN+     L  ++A + G + G+  H + + H+Y +  E    +QL R P  
Sbjct: 184 CDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNAHIYEDQLELMQSVQLKREPLQ 243

Query: 227 LPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            P   INP I  L         +DF +  YE H AI    SV
Sbjct: 244 APIFKINPEIKSLEDLETWVTMDDFEVIGYESHEAIKYPFSV 285


>gi|237809696|ref|YP_002894136.1| thymidylate synthase [Tolumonas auensis DSM 9187]
 gi|259550815|sp|C4LD19|TYSY_TOLAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|237501957|gb|ACQ94550.1| thymidylate synthase [Tolumonas auensis DSM 9187]
          Length = 283

 Score =  259 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 132/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G    + RT     +     + +D+    FP++TT+K  WK+ + E
Sbjct: 1   MKQYLDLCQRIIDEGVWIENQRTNKRCLTVINADLVYDVRNNQFPIITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+++             ++G +YGVQ R W  +DG
Sbjct: 61  LLGYIRGYDNAADFRALGTKSWDANANENEAWLKNPARKGLDDMGRVYGVQGRHWKTHDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++  N    +   L PC     F +    L    YQR
Sbjct: 121 TELDQLGKIVANLSKGIDDRGEILTFHNPGEFNLGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTLLALMAQITGNKPGLAYHKIVNAHIYEDQIELMRDVQLKRKPY 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP+I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PSPKLEINPDIKSLKDLETWVTLDDFNVTGYQHHDAIKYPFSV 283


>gi|312884030|ref|ZP_07743747.1| thymidylate synthase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368488|gb|EFP96023.1| thymidylate synthase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 283

 Score =  259 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSK-GFPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G     +RTG    +     + +D++   FPL+TT+K +WK+ V E
Sbjct: 1   MRQYLDLCQRIVQHGEWIENERTGKRCLTVINADLTYDVANHQFPLVTTRKSYWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANQNEAWLKNAYRKGSDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  I++ L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIIEDLARGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+        ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYAFLAIVAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP+I  L         +DF++  YE H  I    SV
Sbjct: 241 KAPSFQINPDIKSLEDLETWVTLDDFSVEGYEHHEPIQYPFSV 283


>gi|187903049|ref|YP_001883340.1| thymidylate synthase [Musca domestica salivary gland hypertrophy
           virus]
 gi|187384698|gb|ACD03471.1| thymidylate synthase [Musca domestica salivary gland hypertrophy
           virus]
          Length = 294

 Score =  259 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 109/284 (38%), Positives = 165/284 (58%), Gaps = 24/284 (8%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKSVVHELLWF 62
           YL L+R V++ G+ + +RTGV T+  FG Q+R+DL      +LTTKKV ++S + ELLWF
Sbjct: 10  YLTLVRRVLRDGTLKSNRTGVDTKYIFGDQLRYDLRDNRIAMLTTKKVFFRSALEELLWF 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP-------- 102
           LRGD+N + L   GV+IW   +             +   LGPIYG QWR +         
Sbjct: 70  LRGDTNQANLAAKGVNIWRGNSTREYLDSRKLPYPEHESLGPIYGFQWRHFGARYIDCHT 129

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN--GKLS 160
           DY G  +DQ++  +  ++ +P SRR I++AWN   +DKM LPPCH   QF V+   G+LS
Sbjct: 130 DYTGQGVDQLAQCMHQIQYEPSSRRMIMTAWNPNDLDKMVLPPCHMSIQFSVNEKLGELS 189

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             + QRS D+ LG+PFN+ SYSL+  +LA   G + GE + + GD+H+Y  H + A  Q+
Sbjct: 190 GHMTQRSADLMLGVPFNLVSYSLMLHILAHKFGLKAGELVTSYGDLHIYVPHIKNAMRQV 249

Query: 221 SRSPRTLPQMIIN-PNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           SR P   PQ+ +       +     +DF +++Y  H+ +  +++
Sbjct: 250 SRLPYASPQIELKFGRDKRVEELTVDDFAVKNYRHHSQLEYEMA 293


>gi|260913764|ref|ZP_05920240.1| thymidylate synthase [Pasteurella dagmatis ATCC 43325]
 gi|260632303|gb|EEX50478.1| thymidylate synthase [Pasteurella dagmatis ATCC 43325]
          Length = 283

 Score =  259 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 85/283 (30%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G    + RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKQYLELCQRIVDEGVWIENKRTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+ +             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANDNEAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  +V +L      R  I++  N    D   L PC     F +    L    YQR
Sbjct: 121 ETIDQLRKVVNNLNKGIDDRGEIITFLNPGEFDLGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E    +QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKPGKAYHKIINAHIYEDQLELMKNVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LPQ+ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PLPQLEINPDIKTLEDLETWVTMDDFKVTGYQCHEPIKYPFSV 283


>gi|311108781|ref|YP_003981634.1| thymidylate synthase [Achromobacter xylosoxidans A8]
 gi|310763470|gb|ADP18919.1| thymidylate synthase [Achromobacter xylosoxidans A8]
          Length = 323

 Score =  259 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 155/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G+ + +RTG+ T S  G  +RFDL KGFP +TTKK+ +KS + E++
Sbjct: 1   MKQYLDLVQSILDTGAWQENRTGIRTLSMPGASLRFDLQKGFPAVTTKKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG-- 106
            FLR   + +     G  +WD+ A+++             +LGP+YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRELGCKVWDQNANENSQWLANPYREGPDDLGPVYGVQWRQWPAYKMLD 120

Query: 107 --------------------------------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             +DQ+   + ++   P  RR +   WN
Sbjct: 121 ASRPAQIADALSRGYAQVAELEEGGVPKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------LS 241
           G+    F + +GD H+Y NH      QL+R P   P ++++  I D              
Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTREPYEAPTLVLSDRIPDFAVTGRYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  HA + A ++V
Sbjct: 301 VEPGDFSLSGYTHHAPLTAAMAV 323


>gi|134276945|ref|ZP_01763660.1| thymidylate synthase [Burkholderia pseudomallei 305]
 gi|134250595|gb|EBA50674.1| thymidylate synthase [Burkholderia pseudomallei 305]
          Length = 323

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGAQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  L+ RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLFIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       QL R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQLEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323


>gi|160946510|ref|ZP_02093719.1| hypothetical protein PEPMIC_00474 [Parvimonas micra ATCC 33270]
 gi|158447626|gb|EDP24621.1| hypothetical protein PEPMIC_00474 [Parvimonas micra ATCC 33270]
          Length = 276

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 12/271 (4%)

Query: 4   YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++ + + +++ G D           D T   T   FG   R++L++ FP LT +K   K 
Sbjct: 8   FISMCKDILENGVDTKGEKVRPVWEDGTKAYTIKKFGVVNRYNLAEEFPALTLRKTAIKL 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
              E+LW  +  SN   +      +WDEWAD++G +G  YG Q      Y   + DQ+  
Sbjct: 68  CTDEMLWIWQKKSN--NIKDLKSHVWDEWADENGSIGKAYGYQLGVKHKYKEGMFDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
           ++  L+ +PYSRR I + +    + +M L PC     F V   KL+  L QRS D+    
Sbjct: 126 VIYDLKNNPYSRRIITNIYVHEDLSEMNLYPCAYSMTFNVTGNKLNAILNQRSQDILTAN 185

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
            +N+  Y++L  MLA     + GE +H + D H+Y+ H       ++R     P++ +NP
Sbjct: 186 NWNVCQYAILIHMLARECNLEVGELVHVIADAHIYDRHVPIIKELITREKFPAPKVTLNP 245

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           ++ +   F  +D  + +Y+    I    +++
Sbjct: 246 DVKNFYDFTSDDVIIENYKCGEQIKDIPIAI 276


>gi|91227678|ref|ZP_01261955.1| thymidylate synthase [Vibrio alginolyticus 12G01]
 gi|262395196|ref|YP_003287050.1| thymidylate synthase [Vibrio sp. Ex25]
 gi|269966616|ref|ZP_06180697.1| thymidylate synthase [Vibrio alginolyticus 40B]
 gi|91188457|gb|EAS74751.1| thymidylate synthase [Vibrio alginolyticus 12G01]
 gi|262338790|gb|ACY52585.1| thymidylate synthase [Vibrio sp. Ex25]
 gi|269828801|gb|EEZ83054.1| thymidylate synthase [Vibrio alginolyticus 40B]
          Length = 283

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV  L      R  I++ +N        L PC     F + +  L     QR
Sbjct: 121 GHVDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 KAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYPFSV 283


>gi|167919927|ref|ZP_02507018.1| thymidylate synthase [Burkholderia pseudomallei BCC215]
          Length = 323

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 153/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       Q  R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQFEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323


>gi|325662312|ref|ZP_08150921.1| thymidylate synthase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471314|gb|EGC74537.1| thymidylate synthase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 282

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 89/279 (31%), Positives = 136/279 (48%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++++ R +I  G+            D +   T   FG   R+DLSK FP LT ++   
Sbjct: 6   KVFIEMCRDIIDNGTSTEGEKVRPKWEDGSYAYTIKKFGVVNRYDLSKEFPALTLRRTGI 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS V E+LW  +  SN   +H     IWD WAD+DG +G  YG Q +    Y   ++DQ+
Sbjct: 66  KSCVDEMLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMQVKHQYREGMMDQV 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166
             ++  L+ +PYSRR + + +    + +M L PC     F V   +      L+  L QR
Sbjct: 124 DRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKREDSEKLVLNGILNQR 183

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV     +N+  Y++L  MLA V   Q GEF+H + D H+Y+ H    +  + R P  
Sbjct: 184 SQDVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHIPLIEELIKREPLP 243

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P+  +NP+I D  +F  ED  L  Y+    I    ++V
Sbjct: 244 APKFWLNPDIKDFYAFTPEDVRLDDYQTGPQIKNIPIAV 282


>gi|152980241|ref|YP_001352883.1| thymidylate synthase [Janthinobacterium sp. Marseille]
 gi|151280318|gb|ABR88728.1| thymidylate synthase [Janthinobacterium sp. Marseille]
          Length = 324

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 104/324 (32%), Positives = 162/324 (50%), Gaps = 60/324 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
           M QYLDL+R V+  G+ + +RTG+ T S  G  +RFDL   GFP +TTK++ +KSV+ EL
Sbjct: 1   MKQYLDLVRTVLDTGTWQENRTGIRTISIPGAMLRFDLQKDGFPAITTKRLAFKSVIGEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD-- 105
           + FLR   + +     G  +WD+ A+++             +LGP+YGVQWR WP Y   
Sbjct: 61  IGFLRATRSAAEFRELGCKVWDQNANENTEWLNNPYRTGPDDLGPVYGVQWRQWPAYKLL 120

Query: 106 --------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAW 133
                                              IDQ+   + ++  +P SRR +   W
Sbjct: 121 DADQQAQIDDAQKRGFRVVSTVNDEGKDKVLLYKAIDQLRDCLDTIIKNPGSRRILFHGW 180

Query: 134 NVALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           N A +D +ALP CH L+QF       ++S  LY RS D+ LG PFN+A  + L  ++  +
Sbjct: 181 NCADLDAIALPACHLLYQFIPNATTKEISLCLYIRSNDIGLGTPFNLAEAAALLHVVGRL 240

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL-----------L 240
            G+    F + +GD H+Y NH +  + Q++R+P   PQ++++  I D             
Sbjct: 241 TGYTPKWFTYFIGDAHIYENHLDMLNEQMTRAPHPAPQLVLSDRIPDFAVTGKYEPEWLE 300

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
                DF+L +Y+ HA + A ++V
Sbjct: 301 KLEPGDFSLENYQHHAPLTAPMAV 324


>gi|295094923|emb|CBK84014.1| thymidylate synthase [Coprococcus sp. ART55/1]
          Length = 276

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 12/271 (4%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ + +I  G             D T   T   FG   R+DLSK FP +T +K + KS
Sbjct: 8   FINMCKDIIDNGYSTEGEKVRPKWEDGTYAYTIKRFGVVNRYDLSKEFPAITLRKTYVKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            + ELLW  +  SN   +H     IWD WAD++G +G  YG Q      Y   ++DQ+  
Sbjct: 68  AIDELLWIWQKKSN--NVHDLKSHIWDSWADENGSIGKAYGYQLGVKHKYKEGMMDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
           ++  L+ +PYSRR + + +    + +M L PC     F V   +L+  L QRS DV    
Sbjct: 126 LIYDLKNNPYSRRMLTNIYVHQDLSEMNLYPCAYSMTFNVTGDRLNAILNQRSQDVLAAN 185

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
            +N+  Y++L  MLA V GF+ GE +H + D H+Y+ H       ++R     P+  +NP
Sbjct: 186 NWNVVQYAVLVHMLAQVTGFKPGELVHVIADAHIYDRHIPIVKELITRPTHPAPRFYMNP 245

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           ++ D   F  +DF +  YE    I    +++
Sbjct: 246 DVKDFYDFTLDDFRIEDYETGPQIKNIPIAI 276


>gi|54307786|ref|YP_128806.1| thymidylate synthase [Photobacterium profundum SS9]
 gi|62901317|sp|Q6LUM1|TYSY_PHOPR RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|46912209|emb|CAG19004.1| putative thymidylate synthetase (thyA) [Photobacterium profundum
           SS9]
          Length = 283

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 92/283 (32%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G    + RT     +     + FD++   FPL+TT+K  WKS + E
Sbjct: 1   MKQYLELCQRIVDDGVWIENKRTNKRCLTVVNADLTFDVANNQFPLITTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+ +             ++G +YGVQ RSW   DG
Sbjct: 61  LLGYIRGYDNAADFRALGTKTWDMNANDNLAWLNNPHRKGEDDMGRVYGVQGRSWQKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + IDQ+  IV +L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 STIDQLRKIVDNLSEGIDDRGEILTFYNPGEFDLGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSRSPR 225
           S DV LG+ FN      L  ++A + G + G   H + + H+Y +      D+QL+R+P 
Sbjct: 181 SCDVPLGLNFNQVQVYTLLALVAQITGKKPGLAYHKIINAHIYEDQLSLLRDVQLTRTPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++IINP I  L         +DF +  YE H AI    SV
Sbjct: 241 AAPKLIINPKIKCLEDLETWVTMDDFDVIGYEHHEAIKYPFSV 283


>gi|115524162|ref|YP_781073.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
 gi|115518109|gb|ABJ06093.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
          Length = 201

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 114/176 (64%), Positives = 143/176 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           MHQY DLL  ++  G+++ DRTG GT S FG+QMRF L  GFP+LTTK++  K++VHELL
Sbjct: 1   MHQYHDLLERILSDGAEKHDRTGTGTLSVFGHQMRFALDAGFPMLTTKRLPLKAIVHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N+ YL  +GVSIWDEWAD +G+LGP+YG QWRSWP  DG  IDQI+ +V+ ++
Sbjct: 61  WFLKGDTNIKYLKDNGVSIWDEWADANGDLGPVYGAQWRSWPTQDGGSIDQIAGVVEMIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
            +P SRR IV+AWN A ++KMALPPCHCLFQFYV NG+LSCQLYQRS DVFLG+ F
Sbjct: 121 RNPDSRRLIVTAWNPAEVEKMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVGF 176


>gi|187924930|ref|YP_001896572.1| thymidylate synthase [Burkholderia phytofirmans PsJN]
 gi|187716124|gb|ACD17348.1| Thymidylate synthase [Burkholderia phytofirmans PsJN]
          Length = 323

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 101/323 (31%), Positives = 153/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ANAGAQLADATARGFQVVTEFEEDGSNKILLYKAIDQLRQCLDTIMHNPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF  +    ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFLPNAVTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P   I+  + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPSFAISERVPEYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAV 323


>gi|307249319|ref|ZP_07531313.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306858613|gb|EFM90675.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 283

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + ++++ G FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVAAGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P  DG
Sbjct: 61  LLGYIRGYDNAADFRKLGTKSWDANANQNSAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++  +     L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A + G + G+  H + + H+Y + FE   D+QL R P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP I  L         +DF +  YE H AI    SV
Sbjct: 241 ASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 283


>gi|37678863|ref|NP_933472.1| thymidylate synthase [Vibrio vulnificus YJ016]
 gi|50401487|sp|Q7MNN6|TYSY_VIBVY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|37197604|dbj|BAC93443.1| thymidylate synthase [Vibrio vulnificus YJ016]
          Length = 283

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             D ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGDDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|167895299|ref|ZP_02482701.1| thymidylate synthase [Burkholderia pseudomallei 7894]
          Length = 323

 Score =  257 bits (658), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 153/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGIDDLGDVYGVQWRRWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AHADAQIADATSRGFRAVARFDEDGVQKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF   V+  ++S  LY RS DV LG PFN+A  + L  ++  + 
Sbjct: 181 PAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N       Q  R P   P++ I   + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLGMLKQQFEREPFDSPRLEIAERVPEYAKTGQYEPQWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y  H  + A ++V
Sbjct: 301 IEPSDFTLVGYRHHEPLSAPMAV 323


>gi|326794010|ref|YP_004311830.1| Thymidylate synthase [Marinomonas mediterranea MMB-1]
 gi|326544774|gb|ADZ89994.1| Thymidylate synthase [Marinomonas mediterranea MMB-1]
          Length = 283

 Score =  257 bits (658), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G    + RTG    +     + +++  G FPL+TT+K +WKS + E
Sbjct: 1   MKQYLDLCQRILDEGVWVDNERTGKRCLTVINADLTYNVGAGEFPLVTTRKSYWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L +LRG  N +   + G   WD  A+++             ++G  YG   R++P  DG
Sbjct: 61  ILGYLRGYDNAADFRQLGTKTWDANANENQVWLNNPYRKGEDDMGLCYGAIGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID +  IV  L+    +R  I++ ++        L PC     F +    L     QR
Sbjct: 121 GSIDLLKQIVHDLKRGVDNRGEILTFYHPGAFHMACLRPCMYSHHFSLLGETLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225
           S DV LG+ FN+    +L  ++A + G + G   H L + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVLLALVAQITGKKAGYAYHKLVNSHIYEDQLAPMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP+I  L         +DF +  YE H AI    SV
Sbjct: 241 EPPRLKINPDIKTLEDIETWVTMDDFEVEGYECHDAIQYPFSV 283


>gi|27363979|ref|NP_759507.1| thymidylate synthase [Vibrio vulnificus CMCP6]
 gi|29611889|sp|Q8DER9|TYSY_VIBVU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|27360096|gb|AAO09034.1| thymidylate synthase [Vibrio vulnificus CMCP6]
          Length = 283

 Score =  257 bits (658), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|28897298|ref|NP_796903.1| thymidylate synthase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363899|ref|ZP_05776647.1| thymidylate synthase [Vibrio parahaemolyticus K5030]
 gi|260876263|ref|ZP_05888618.1| thymidylate synthase [Vibrio parahaemolyticus AN-5034]
 gi|260897576|ref|ZP_05906072.1| thymidylate synthase [Vibrio parahaemolyticus Peru-466]
 gi|260901099|ref|ZP_05909494.1| thymidylate synthase [Vibrio parahaemolyticus AQ4037]
 gi|31077025|sp|Q87SA0|TYSY_VIBPA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|28805507|dbj|BAC58787.1| thymidylate synthase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308084906|gb|EFO34601.1| thymidylate synthase [Vibrio parahaemolyticus Peru-466]
 gi|308092896|gb|EFO42591.1| thymidylate synthase [Vibrio parahaemolyticus AN-5034]
 gi|308107467|gb|EFO45007.1| thymidylate synthase [Vibrio parahaemolyticus AQ4037]
 gi|308112969|gb|EFO50509.1| thymidylate synthase [Vibrio parahaemolyticus K5030]
 gi|328472062|gb|EGF42939.1| thymidylate synthase [Vibrio parahaemolyticus 10329]
          Length = 283

 Score =  257 bits (658), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F + +  L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYPFSV 283


>gi|186475553|ref|YP_001857023.1| thymidylate synthase [Burkholderia phymatum STM815]
 gi|184192012|gb|ACC69977.1| Thymidylate synthase [Burkholderia phymatum STM815]
          Length = 323

 Score =  257 bits (658), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 101/323 (31%), Positives = 154/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  GS + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGSWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRALGCKVWDANANENAQWLANPYREGPDDLGDVYGVQWRRWPAYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ATASAQLEDAASRGYAPVTEFEEDGMRKVLLYKAIDQLRQCLDAIMHNPSDRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A+++++ALP CH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLEEIALPACHLLYQFLPNASKREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   PQ  I+  + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTRDPYESPQFAISERVPDYTKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A +++
Sbjct: 301 VEPSDFSLVGYRHHEPLTAPMAI 323


>gi|32709399|gb|AAP86960.1| tymidylate synthase [Haemophilus parasuis]
          Length = 283

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G     +RTG    +     + +D++KG FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLDLCQRIVEQGKWVENERTGKRCLTVINADLIYDVAKGEFPLVTTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P   G
Sbjct: 61  LLGYIRGYDNAADFRQLGTKSWDANANENAAWLANPHRKGEDDMGLVYGAVGRNFPKVGG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++        L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHLGCLRPCLHSHHFSLLDGTLYLNSIQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A + G Q G+  H + + H+Y +  E   D+QL R+P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHQAGQAFHKIVNAHIYEDQLELMRDVQLKRTPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             P + INP+I  L          DF +  YE H +I    SV
Sbjct: 241 KAPTLKINPDIKSLEDLEIWVTLADFEVEGYEYHPSIQYPFSV 283


>gi|84393972|ref|ZP_00992712.1| thymidylate synthase [Vibrio splendidus 12B01]
 gi|84375416|gb|EAP92323.1| thymidylate synthase [Vibrio splendidus 12B01]
          Length = 283

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVNDGTWIENERTGKRCLTVINADLEYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  ++             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANSNLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H L + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 AGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEVIKYPFSV 283


>gi|295107966|emb|CBL21919.1| thymidylate synthase [Ruminococcus obeum A2-162]
          Length = 282

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 85/277 (30%), Positives = 137/277 (49%), Gaps = 18/277 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ + VI+ G+            D T   T   FG   R+DL + FP LT +K   KS
Sbjct: 8   FINMCKDVIENGTSTEGEKVRPVWEDGTPAYTIKRFGVVNRYDLREEFPALTLRKTALKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            + E+LW  +  SN   +H     IWD WAD++G +G  YG Q +    Y   ++DQ+  
Sbjct: 68  AMDEILWIWQKKSN--NIHDLHSHIWDSWADENGSIGKAYGYQLQVKHQYKEGMMDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSG 168
           ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS 
Sbjct: 126 VLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLTLNAVLNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+     +N+  YS+L MM+A V G + GE +H + D H+Y+ H       +SR+P   P
Sbjct: 186 DILAANNWNVCQYSILLMMIAQVCGMEAGELVHVIADCHIYDRHVPVIKELISRTPYPAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            + +NP I +   F  +D  + +Y+    I    ++V
Sbjct: 246 TVRLNPEIKNFYDFTTDDLIVENYQTWPQIKNIPIAV 282


>gi|126207603|ref|YP_001052828.1| thymidylate synthase [Actinobacillus pleuropneumoniae L20]
 gi|303249819|ref|ZP_07336023.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307251642|ref|ZP_07533547.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307256140|ref|ZP_07537927.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|126096395|gb|ABN73223.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|302651386|gb|EFL81538.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860839|gb|EFM92847.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306865321|gb|EFM97217.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 283

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + ++++ G FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P  DG
Sbjct: 61  LLGYIRGYDNAADFRKLGTKSWDANANQNLAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++  +     L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQLELMRDVQLKRKPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP I  L         +DF +  YE H AI    SV
Sbjct: 241 ASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 283


>gi|320157357|ref|YP_004189736.1| thymidylate synthase [Vibrio vulnificus MO6-24/O]
 gi|319932669|gb|ADV87533.1| thymidylate synthase [Vibrio vulnificus MO6-24/O]
          Length = 283

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL+L R ++  G     +RTG    +     + ++++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCRRIVDEGHWVENERTGKRCLTVINADLTYNVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNAHIYEDQLALMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P   INP I  L         +DF +  YE H  I    SV
Sbjct: 241 QAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|327409969|ref|YP_004347389.1| dihydrofolate reductase-thymidylate synthase [Lausannevirus]
 gi|326785143|gb|AEA07277.1| dihydrofolate reductase-thymidylate synthase [Lausannevirus]
          Length = 446

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 118/283 (41%), Positives = 158/283 (55%), Gaps = 22/283 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL LL  V+ +G +R+DRTG GT+S F   + F ++S+ FPLLT KK +W  ++ ELLWF
Sbjct: 164 YLALLSQVVNYGDERQDRTGTGTKSLFAKTLHFPNVSENFPLLTVKKTNWDKILSELLWF 223

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------WP 102
           L G ++ + L   G  IWD  A K+            G+ GPIY  QWR           
Sbjct: 224 LSGSTDATILKEKGNDIWDGNASKEFQEKVGLSHYEEGDCGPIYPFQWRHAGAKYVDCKK 283

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G   DQI  +V+ ++ DP SRR ++ +WNVA +DKM LPPCH  FQ YV   K+  Q
Sbjct: 284 DYTGEGKDQILEMVRLIQEDPTSRRILLESWNVADLDKMVLPPCHKTFQVYVRGDKIDGQ 343

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +YQRS D+ LG+PFNIASY+ L  +LA   G   G      GDVH+Y NH E A   L R
Sbjct: 344 VYQRSADLALGVPFNIASYACLLSLLAKRTGKSAGNLTLCFGDVHVYKNHMENAQKMLER 403

Query: 223 SPRTLPQMII-NPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            P   P + I N     L      DF L+ Y+ ++A+   ++V
Sbjct: 404 VPHRPPILEIVNIADDTLKKLEPSDFVLKDYKSYSALNFAMAV 446


>gi|261344767|ref|ZP_05972411.1| hypothetical protein PROVRUST_06031 [Providencia rustigianii DSM
           4541]
 gi|282567211|gb|EFB72746.1| thymidylate synthase [Providencia rustigianii DSM 4541]
          Length = 283

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M  YL+L + +I  G    + RTGV   +     + +D+ +  FPL+TT+K  +K+ + E
Sbjct: 1   MKPYLELCQRIIDEGQWVENKRTGVRCLTVINADLEYDVGNNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+++             ++G +YGVQ R+W   DG
Sbjct: 61  LLGYLRGYDNAAQFREIGCNTWNANANENPAWLANPHRKGEDDMGRVYGVQGRTWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  +V +L+     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 THLDQLKKVVNNLKNGIDDRAEIITFYNPGEFEMGCLRPCMHTHTFSLLGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQCFVLLALIARITGHKAGKAYHKIVNAHIYENQLPLMRDVQLKREPY 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP I  L         +DF L  Y+ H AI    +V
Sbjct: 241 PSPRLTINPEIKTLEDLETWVTTDDFMLDGYQCHEAIKYPFTV 283


>gi|221117830|ref|XP_002168778.1| PREDICTED: similar to thymidylate synthase, partial [Hydra
           magnipapillata]
          Length = 197

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 103/241 (42%), Positives = 131/241 (54%), Gaps = 44/241 (18%)

Query: 24  VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83
            GT S FG QMRF+L + FPLLTTK+V WK VV ELLWF+ G ++ + L + GV IW   
Sbjct: 1   TGTLSIFGGQMRFNLRESFPLLTTKRVFWKGVVEELLWFISGSTDGNILAQKGVQIW--- 57

Query: 84  ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
                                                 +    R  +   N   I  MAL
Sbjct: 58  --------------------------------------NSNGTREFLDKCN---IPLMAL 76

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           PPCH   QFYV NG+LSCQ+YQRS D+ LGIPFNIASYSLLT ++A V   + G+FIHTL
Sbjct: 77  PPCHSFCQFYVANGELSCQMYQRSCDMGLGIPFNIASYSLLTYIIAHVCNLKPGDFIHTL 136

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           GD H+YNNH      Q+ RSPR  P++ I   + ++  F+ +DF L  Y PH  I   ++
Sbjct: 137 GDAHVYNNHVSALKEQIGRSPRPFPKLNIKRKVENIDDFKSDDFELIGYNPHQKIKMAMA 196

Query: 264 V 264
           V
Sbjct: 197 V 197


>gi|226323905|ref|ZP_03799423.1| hypothetical protein COPCOM_01680 [Coprococcus comes ATCC 27758]
 gi|225207454|gb|EEG89808.1| hypothetical protein COPCOM_01680 [Coprococcus comes ATCC 27758]
          Length = 282

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/279 (31%), Positives = 130/279 (46%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++++ R +I  G+            D T   T   FG   R+DL K FP LT ++   
Sbjct: 6   KVFIEMCRDIIDNGTSTEGEKVRPRWEDGTPAYTVKKFGVVNRYDLRKEFPALTLRRTGI 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS   ELLW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   ++DQ+
Sbjct: 66  KSCTDELLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMGVKHVYKEGMMDQV 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166
             ++  L+ +PYSRR + + +    + +M L PC     F V   K      L+  L QR
Sbjct: 124 DRVLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEKGSDKLTLNGILNQR 183

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV     +N+  Y++L  MLA V   Q GEF+H + D H+Y+ H    +  +SR    
Sbjct: 184 SQDVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHISLIEELISRETHP 243

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P+  +NP + D   F  +D  L  Y     I    ++V
Sbjct: 244 APKFWLNPEVKDFYQFTPDDVRLDDYVTGPQIKNIPIAV 282


>gi|15601944|ref|NP_245016.1| thymidylate synthase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431942|sp|P57808|TYSY_PASMU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|12720288|gb|AAK02163.1| ThyA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 283

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M  YL+L + ++  G    + RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MKHYLELCQRIVDEGVWVENARTGKRCLTVIDADLTYDVANNQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGTKTWDANANENSAWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +LR     R  I++ +N    +   L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVNNLRNGIDDRGEIMTFFNPGEFELGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  +    +QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGKAYHKIINAHIYEDQLDLMKNVQLKRDPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LPQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PLPQLHINPEIKTLEDLETWVTMDDFKVTGYQCHDAIKYPFSV 283


>gi|152978403|ref|YP_001344032.1| thymidylate synthase [Actinobacillus succinogenes 130Z]
 gi|171704255|sp|A6VMA0|TYSY_ACTSZ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|150840126|gb|ABR74097.1| Thymidylate synthase [Actinobacillus succinogenes 130Z]
          Length = 283

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 83/283 (29%), Positives = 132/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G    + RTG    +     + ++ +   FP++TT+K +WK+ + E
Sbjct: 1   MRQYLDLCQRIVDEGVWLENQRTGKRCLTVINADLTYNAAANEFPIITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGAKTWDANANENQAWLNNPVRKGVDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV  L      R  I++  N    D   L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVDDLSRGIDDRGEILTFLNPGEFDLGCLRPCMYSHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKPGQAYHKIVNAHIYEDQLDLMRDVQLKRRPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP+I  L         +DF +  YE H  I    SV
Sbjct: 241 PSPRLEINPDIKTLEDLETWVTLDDFNVVGYECHEPIKYPFSV 283


>gi|149911436|ref|ZP_01900053.1| thymidylate synthase [Moritella sp. PE36]
 gi|149805467|gb|EDM65474.1| thymidylate synthase [Moritella sp. PE36]
          Length = 283

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + +D++   FPL+TT+K  WKS + E
Sbjct: 1   MKQYLDLCNRIVSEGVWVENERTGKRCLTVINADLTYDVANNEFPLVTTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           ++ ++RG  N +     G   WD  A+ +             ++G +YG   R+W    G
Sbjct: 61  IIGYIRGYDNAADFRALGTKTWDANANDNPAWLANPHRKGKDDMGYVYGACARNWVKPQG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  I+  L     +R  I++ +N    +   L PC     F +    L     QR
Sbjct: 121 GTVDLLRQIIDDLSNGIDNRGEILTFFNPGAFELGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +L  ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVHVLLALVAQITGHKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP++ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 QLPKLHINPKIKTLEDLETWVTMDDFEVTDYQHHDAIKYPFSV 283


>gi|317405520|gb|EFV85827.1| thymidylate synthase [Achromobacter xylosoxidans C54]
          Length = 323

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 161/323 (49%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL++ ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + E++
Sbjct: 1   MKQYLDLVQSILDTGAWQENRTGIRTLSMPGASLRFDLQQGFPAVTTKKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
            FLRG  + +     G  +WD+ A+++             +LGP+YGVQWR WP      
Sbjct: 61  GFLRGVRSAAEFRELGCKVWDQNANENAQWLANPYREGPDDLGPVYGVQWRQWPAYKLLD 120

Query: 103 -DYDG---------------------------NVIDQISSIVQSLRADPYSRRHIVSAWN 134
            D DG                             +DQ+   + ++   P  RR +   WN
Sbjct: 121 ADRDGQIADALGRGYTKVADLQEGGASKVLLYKAVDQLRQCLDTIHERPGDRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A I++MALPPCH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 WAQIEEMALPPCHLLYQFLPNATTREISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLS---FRYE---- 245
           G+    F + +GD H+Y NH      QL+R+P   P++ ++  I D      +  E    
Sbjct: 241 GYTPRWFTYFIGDAHIYENHLPMLREQLTRTPLEAPRLALSDRIPDFAQTGRYEPEWLEK 300

Query: 246 ----DFTLRSYEPHAAILAKVSV 264
               DF+L  Y  HA + A ++V
Sbjct: 301 VEPGDFSLAGYTHHAPLTAPMAV 323


>gi|261250328|ref|ZP_05942904.1| thymidylate synthase [Vibrio orientalis CIP 102891]
 gi|260939444|gb|EEX95430.1| thymidylate synthase [Vibrio orientalis CIP 102891]
          Length = 283

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNADDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
                 INP I  L         +DF +  YE H AI    SV
Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHEAIKYPFSV 283


>gi|91784762|ref|YP_559968.1| thymidylate synthase [Burkholderia xenovorans LB400]
 gi|91688716|gb|ABE31916.1| thymidylate synthase [Burkholderia xenovorans LB400]
          Length = 323

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ ++S V EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFRSAVGELI 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYREGPDDLGDVYGVQWRQWPAYKVLN 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ADASAQLGDATARGFRVVTGFEEDGSRKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFVPNAVRKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL R P   P   I+  + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLKREPYESPAFAISDRVPEYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPADFSLVGYRHHEPLTAPMAV 323


>gi|52424460|ref|YP_087597.1| thymidylate synthase [Mannheimia succiniciproducens MBEL55E]
 gi|62901273|sp|Q65VJ8|TYSY_MANSM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|52306512|gb|AAU37012.1| ThyA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 283

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G    + RTG    +     + +D++   FP++TT+K +WK+ + E
Sbjct: 1   MRQYLDLCQRIVNEGCWIENKRTGKRCLTVINADLTYDVANNRFPIITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
            L ++RG  N +   + G   WD  A+++             ++G +YGVQ R+W   +G
Sbjct: 61  FLGYIRGYDNAADFRKLGAKTWDANANENQVWLNNPHRKGTDDMGRVYGVQGRAWRKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV +L      R  I++  N    D   L PC     F +    L    YQR
Sbjct: 121 ETVDQLRKIVNNLSRGIDDRGEILTFLNPGEFDLGCLRPCMYNHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQIQVFTFLALMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PSPKLEINPDIKTLEDLETWVTMDDFNVVGYQCHEPIKYPFSV 283


>gi|330815938|ref|YP_004359643.1| Thymidylate synthase [Burkholderia gladioli BSR3]
 gi|327368331|gb|AEA59687.1| Thymidylate synthase [Burkholderia gladioli BSR3]
          Length = 323

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 152/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRSILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+ +             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAAEFRALGCKVWDANANDNAAWLANPYRTGLDDLGDVYGVQWRRWPGYKVLD 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 AQATGQLEDALARGYRIVTRFEEEGVQQVLLYKAIDQLRDCLDTIMRDPSSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
              +D++ALP CH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PVKLDEIALPACHLLYQFLPNPVTREISLCLYIRSNDVGLGTPFNLTEGAALLSLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  E  + QL R P   P++ I   + D           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLEMLNQQLEREPYESPRLAIADRVPDYAKTGVYEPEWLER 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  HA + A ++V
Sbjct: 301 IEPADFSLEGYRHHAPLTAPMAV 323


>gi|301768887|ref|XP_002919869.1| PREDICTED: LOW QUALITY PROTEIN: thymidylate synthase-like
           [Ailuropoda melanoleuca]
          Length = 358

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 97/283 (34%), Positives = 148/283 (52%), Gaps = 24/283 (8%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           Q L  ++H++     + + TG      F  Q  + L + FPLLTT +V  K V+ ELLWF
Sbjct: 53  QCLGQIQHILHXRFQKDECTGTSMLWVF-MQAHYSLREEFPLLTTTRVFXKGVLEELLWF 111

Query: 63  LRGDSNVSY-LHRHGVSIWDEWADKD------------GELGPIYGVQWRS----WPDYD 105
           ++G +N  + L   GV IWD  A +D            G+LGP YG QWR     + D D
Sbjct: 112 IKGSTNAKHSLSSKGVKIWDANASRDFLDSLGFSSGVEGDLGPGYGSQWRHLGAEYKDKD 171

Query: 106 ----GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
               G+ +DQ+  +  ++   P  RR I+  WN   +  +AL PCH L       G+ SC
Sbjct: 172 AGDSGHGVDQLQKVFGTIETKPEDRRIILCGWNPKALPLLALLPCHALCXEL--RGEWSC 229

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLY+R+GD+ L +PFN+A  + L  ++A + G + G  + TL D  +Y NH E   +QL 
Sbjct: 230 QLYRRAGDMGLAVPFNLACRTPLAYVIAHITGLKPGNLVRTLXDTRIYLNHVEPLKMQLQ 289

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +  R  P++ I   +  +  F+ EDF ++ Y PH  I  +++V
Sbjct: 290 QETRPFPKLKILQKVEMIHDFKAEDFQIKGYNPHPTIKMEMAV 332


>gi|163815127|ref|ZP_02206508.1| hypothetical protein COPEUT_01283 [Coprococcus eutactus ATCC 27759]
 gi|158449536|gb|EDP26531.1| hypothetical protein COPEUT_01283 [Coprococcus eutactus ATCC 27759]
          Length = 294

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 12/271 (4%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++   +I+ G             D +   T   FG   R+DLSK FP +T +K + KS
Sbjct: 26  FINMCSDIIENGYSTEGEKVRPKWEDGSYAYTIKKFGVVNRYDLSKEFPAITLRKTYIKS 85

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            + ELLW  +  SN   +H     IWD WAD++G +G  YG Q      Y   ++DQ+  
Sbjct: 86  AIDELLWIWQKKSN--NVHDLKSHIWDSWADENGSIGKAYGYQLGVKHQYKEGMMDQVDR 143

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
           ++  L+ +PYSRR + + +    + +M L PC     F V   +L+  L QRS DV    
Sbjct: 144 LLYDLKNNPYSRRMMTNIYVHQDLHEMNLYPCAYSMTFNVTGDRLNAILNQRSQDVLTAN 203

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
            +N+  Y+ L  M+A V GF+ GE +H + D H+Y+ H       + R     P++I+NP
Sbjct: 204 NWNVVQYAALVYMIAQVTGFKPGELVHVIADAHIYDRHIPLVKELIKRPTYPAPKVILNP 263

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           ++ D   F  +DFT+  Y     I    V++
Sbjct: 264 DVKDFYDFTVDDFTIEDYVTGPQIKNIPVAI 294


>gi|322515113|ref|ZP_08068119.1| thymidylate synthase [Actinobacillus ureae ATCC 25976]
 gi|322118891|gb|EFX91076.1| thymidylate synthase [Actinobacillus ureae ATCC 25976]
          Length = 283

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + +D++ G FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYDVANGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+++             ++G +YG   R++P  DG
Sbjct: 61  LLGYIRGYDNAADFRNLGTKSWDVNANQNAAWLANPYRKGEDDMGLVYGAVGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID +  IV  L+    +R  I + ++  +     L PC     F + +G L     QR
Sbjct: 121 GSIDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A +   + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITEHKAGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP I  L         +DF +  YE H +I    +V
Sbjct: 241 GAPKLWINPEIKSLEDLETWVTLDDFKVEDYEYHPSIQYPFAV 283


>gi|296158288|ref|ZP_06841120.1| thymidylate synthase [Burkholderia sp. Ch1-1]
 gi|295891624|gb|EFG71410.1| thymidylate synthase [Burkholderia sp. Ch1-1]
          Length = 323

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 101/323 (31%), Positives = 153/323 (47%), Gaps = 59/323 (18%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T S  G  +RFDL +GFP +TTKK+ +KS V EL+
Sbjct: 1   MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAVGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y    
Sbjct: 61  GFLRASRSAADFRDLGCKVWDANANQNPQWLANPYRQGPDDLGDVYGVQWRQWPAYKVLN 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  +P  RR +  AWN
Sbjct: 121 ADASAQLVDATARGFRVVTEFEEDGSRKVLLYKAIDQLRQCLDTIMQNPADRRILFHAWN 180

Query: 135 VALIDKMALPPCHCLFQF--YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A++D++ALP CH L+QF       ++S  LY RS DV LG PFN+   + L  ++  + 
Sbjct: 181 PAVLDQIALPACHLLYQFVPNAVRKEISLCLYIRSNDVGLGTPFNLTEGAALLHLVGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD-----------LLS 241
           G+    F + +GD H+Y N  +    QL+R P   P   I+  + +           L  
Sbjct: 241 GYTPRWFTYFIGDAHIYENQLDMLQQQLTREPYESPAFAISDRVPEYAKTGVYEPEWLEK 300

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DF+L  Y  H  + A ++V
Sbjct: 301 IEPADFSLVGYRHHDPLTAPMAV 323


>gi|2293408|gb|AAC26324.1| thymidylate synthase [Bacillus subtilis]
          Length = 231

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 92/232 (39%), Positives = 139/232 (59%), Gaps = 3/232 (1%)

Query: 35  RFDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           RFD S+  P+LTTKKV WK+ + ELLW  +   ++V+ L++ GV IWD+W  +DG +G  
Sbjct: 1   RFDNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHA 59

Query: 94  YGVQWRSW-PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           YG Q      + +G  +DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+
Sbjct: 60  YGFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQW 119

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
           YV  GKL  ++  RS D+ LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H
Sbjct: 120 YVKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRH 179

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +   +Q+ R     P++ INP + D   F  +DF L +Y+    +L +V+V
Sbjct: 180 IDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 231


>gi|156973290|ref|YP_001444197.1| thymidylate synthase [Vibrio harveyi ATCC BAA-1116]
 gi|166231743|sp|A7MXJ9|TYSY_VIBHB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|156524884|gb|ABU69970.1| hypothetical protein VIBHAR_00971 [Vibrio harveyi ATCC BAA-1116]
          Length = 283

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ RSW   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRSWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L  D   R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRDVDDRGEILNFYNPGEFHIGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
                 INP I  L         +DF +  YE H  I    SV
Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|89093745|ref|ZP_01166691.1| thymidylate synthase [Oceanospirillum sp. MED92]
 gi|89081875|gb|EAR61101.1| thymidylate synthase [Oceanospirillum sp. MED92]
          Length = 283

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 132/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G     +RTG    +     + +D++KG FP++TT+K  +KS + E
Sbjct: 1   MRQYLDLCQRIIDEGVWVENERTGKRCLTVINADLTYDVAKGEFPMVTTRKTFYKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L +LRG  N +   + G   WD  A+ +             + G IYG   R++P  DG
Sbjct: 61  MLGYLRGYDNAADFRKIGTKTWDANANDNAAWLNNPYRKGEDDCGFIYGKVGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID +  IV  L      R  I + ++        L PC     F +    L     QR
Sbjct: 121 GSIDLLRKIVDDLSQGIDDRGEIYTFYHPGAFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G+  H + + H+Y +  E   D+QL+R P 
Sbjct: 181 SCDVPLGLTFNMIQVYFLLAIMAQITGKKPGKAYHRIVNAHIYEDQVELMRDVQLTREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            LP   INP+I  L         +DF +  YE H AI    SV
Sbjct: 241 PLPTFKINPDIKTLEDLETWVTVDDFEVEGYEHHEAIQYPFSV 283


>gi|269959596|ref|ZP_06173977.1| thymidylate synthase [Vibrio harveyi 1DA3]
 gi|269835654|gb|EEZ89732.1| thymidylate synthase [Vibrio harveyi 1DA3]
          Length = 283

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ RSW   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRSWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
                 INP I  L         +DF +  YE H  I    SV
Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|160892516|ref|ZP_02073306.1| hypothetical protein CLOL250_00045 [Clostridium sp. L2-50]
 gi|156865557|gb|EDO58988.1| hypothetical protein CLOL250_00045 [Clostridium sp. L2-50]
          Length = 276

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 12/271 (4%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R +I+ G             D T   T   FG   R+DLSK FP +T +K + KS
Sbjct: 8   FIEMCRSIIENGYSTEGEKVRPKWEDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTYIKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            + E+LW  +  SN   +H     IWD WAD+DG +G  YG Q      Y   + DQ+  
Sbjct: 68  AIDEILWIWQKKSN--NVHDLKSHIWDSWADEDGSIGKAYGYQMGVKHQYKEGMFDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
           ++  L+ +PYSRR + + +    + +M L PC     F V   +L+  L QRS DV    
Sbjct: 126 LIYDLKHNPYSRRMMTNMYVHEDLHEMNLYPCAYGMTFNVTGDRLNAILNQRSQDVLAAN 185

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
            +N+  Y+ L  M+A V GF+ GE +H + D H+Y+ H       +SR     P+  +NP
Sbjct: 186 NWNVVQYAALVYMIAQVTGFKPGELVHVIADAHIYDRHIPIVKELISRETYPAPKFTMNP 245

Query: 235 NIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           ++ D   F  +DFT+  Y+    +    +++
Sbjct: 246 DVKDFYQFTLDDFTIEDYQTGPQVKNIPIAI 276


>gi|209694165|ref|YP_002262093.1| thymidylate synthase [Aliivibrio salmonicida LFI1238]
 gi|208008116|emb|CAQ78258.1| thymidylate synthase [Aliivibrio salmonicida LFI1238]
          Length = 285

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 86/282 (30%), Positives = 129/282 (45%), Gaps = 19/282 (6%)

Query: 2   HQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL + ++  G+    +RTG    +     + +D++ G FPL+TT+K  WKS V E+
Sbjct: 4   KQYLDLCQRIVSEGTWIENERTGKRCLTVINADLTYDVANGEFPLVTTRKSFWKSAVAEM 63

Query: 60  LWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDGN 107
           + ++RG  N     + G   WD                 + ++G +YGVQ RSW   +G 
Sbjct: 64  IGYIRGYDNAEDFRQIGTKTWDANANLNNAWLNNPHRKGEDDMGRVYGVQGRSWAKPNGE 123

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQ+  I+  L      R  I++ +N    D   L PC     F +    L     QRS
Sbjct: 124 FVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDIGCLRPCMYSHHFSLLGDTLYLNSTQRS 183

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPRT 226
            DV LG+ FN+     L  ++A + G + G+  H + + H+Y +  E   D+QL R P  
Sbjct: 184 CDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNGHIYEDQLELMKDVQLKREPLK 243

Query: 227 LPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            P   INP I  L         +DF +  YE H  I    SV
Sbjct: 244 APVFKINPKITSLEDLETWVTMDDFEVIGYESHEVIKYPFSV 285


>gi|331086111|ref|ZP_08335194.1| thymidylate synthase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330407034|gb|EGG86539.1| thymidylate synthase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 282

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 88/279 (31%), Positives = 136/279 (48%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++++ R +I  G+            D +   T   FG   R+DLSK FP LT ++   
Sbjct: 6   KVFIEMCRDIIDNGTSTEGEKVRPKWEDGSYAYTIKKFGVVNRYDLSKEFPALTLRRTGI 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS V E+LW  +  SN   +H     IWD WAD+DG +G  YG Q +    Y   ++DQ+
Sbjct: 66  KSCVDEMLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQMQVKHQYREGMMDQV 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166
             ++  L+ +PYSRR + + +    + +M L PC     F V   +      L+  L QR
Sbjct: 124 DRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKREDSEKLVLNGILNQR 183

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV     +N+  Y++L  MLA V   Q GEF+H + D H+Y+ H    +  + R P  
Sbjct: 184 SQDVLAANNWNVCQYAVLLHMLAQVCDMQVGEFVHVIADAHIYDRHIPLIEELIKREPLP 243

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P+  +NP+I D  +F  ED  L  Y+    +    ++V
Sbjct: 244 APKFWLNPDIKDFYAFTPEDVRLDDYQTGPQVKNIPIAV 282


>gi|109900136|ref|YP_663391.1| thymidylate synthase [Pseudoalteromonas atlantica T6c]
 gi|123170603|sp|Q15P51|TYSY_PSEA6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|109702417|gb|ABG42337.1| thymidylate synthase [Pseudoalteromonas atlantica T6c]
          Length = 283

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G    + RTG    +     + +++  G FPL+TT+K  +KS + E
Sbjct: 1   MKQYLDLCQRIVDDGKWVNNERTGKKCLTVINADLTYNVGNGEFPLVTTRKSFYKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           ++ ++RG  N +   + G S WD  A+++             + G IYG   R++P  DG
Sbjct: 61  MIGYIRGYDNAADFRKIGTSTWDANANQNQAWLDNPHRKGEDDCGLIYGKIGRNFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             ID ++ I+  L+     R  I + ++        L PC     F + +  L     QR
Sbjct: 121 GSIDLLAKIIYDLKNGIDDRGEIFTFYHPGAFHMGCLRPCMYSHHFSLLDDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+     L  ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYFLLAIVAQITGKKAGMAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
            +P++IINP+I  L         +DF++  Y  H AI    SV
Sbjct: 241 GMPKLIINPDIKSLEDLETWVTMDDFSIEGYAHHPAIKYPFSV 283


>gi|166240844|ref|ZP_02240716.1| Thymidylate synthase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 182

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 97/179 (54%), Positives = 125/179 (69%)

Query: 86  KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
           + G+LG +YG QWR+W   +G  IDQ+  I+ +++ +P SRR IVSAWN   I  M LPP
Sbjct: 4   EFGDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVSAWNPEDIPSMVLPP 63

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           CH LFQFYV  G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A   G + GEFIHTLGD
Sbjct: 64  CHTLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHECGIEAGEFIHTLGD 123

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            H+Y+NH +Q  LQLSR P+ LP + INP +  +      D  L  Y+PH +I A V+V
Sbjct: 124 AHVYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEGYDPHPSIKAPVAV 182


>gi|154484777|ref|ZP_02027225.1| hypothetical protein EUBVEN_02495 [Eubacterium ventriosum ATCC
           27560]
 gi|149734625|gb|EDM50542.1| hypothetical protein EUBVEN_02495 [Eubacterium ventriosum ATCC
           27560]
          Length = 282

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 86/275 (31%), Positives = 130/275 (47%), Gaps = 18/275 (6%)

Query: 6   DLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           D+ R+++  G+D           D +   T   FG   R+DL K FP +T +K  +K+ +
Sbjct: 10  DMCRNILDNGTDTKGEKVRPKWDDGSFAYTIKKFGVVNRYDLKKEFPAITLRKTGFKNCL 69

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            ELLW  +  SN   +H     IWD WAD+ G +G  YG Q      Y    +DQ+  ++
Sbjct: 70  DELLWIWQKKSN--NVHDLNSHIWDAWADETGSIGKAYGYQLGIKHHYKEGDMDQVDRVL 127

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGDV 170
             L+ +PYSRR + + +N   + +M L PC     F V   +      L+  L QRS DV
Sbjct: 128 YDLKHNPYSRRIMTNIYNHEDLHEMNLYPCAYSMTFNVTKNEETGNLVLNGILNQRSQDV 187

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
                +N+  Y+ L  M A V   + GEFIH + D H+Y+ H    +  ++R     P++
Sbjct: 188 LTANNWNVCQYAALIHMFAQVNDMEVGEFIHVIADAHIYDKHVPLIEELITREQHPAPKL 247

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            INP I +   F  +D  L  Y     I    V+V
Sbjct: 248 WINPEIKNFYDFTVDDLKLEDYVTGPQIKNIPVAV 282


>gi|291545325|emb|CBL18433.1| thymidylate synthase [Ruminococcus sp. SR1/5]
          Length = 282

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 88/278 (31%), Positives = 134/278 (48%), Gaps = 20/278 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+ + VI+ G+            D T   T   FG   R+DL K FP LT +K   KS
Sbjct: 8   FIDMCKDVIENGTSTEGEKVRPVWEDGTPAYTIKRFGVVNRYDLRKEFPALTLRKTALKS 67

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + E+LW  +   +N+  LH     IWD WAD++G +G  YG Q      Y   ++DQ+ 
Sbjct: 68  AMDEILWIWQQKSNNIHDLH---SHIWDSWADENGSIGKAYGYQLGVKHQYKEGMMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS
Sbjct: 125 RVLFDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLVLNAVLNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  YSLL MM+A     + GE +H + D H+Y+ H       +SR P   
Sbjct: 185 QDILAANNWNVCQYSLLLMMIAQACDMEAGELVHVIADCHIYDRHIPVIKELISRKPYPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           P + +NP I D   F  +D  + +YE    I    ++V
Sbjct: 245 PTVKLNPEIKDFYKFTTDDLIVENYETWPQIKNIPIAV 282


>gi|240949099|ref|ZP_04753447.1| thymidylate synthase [Actinobacillus minor NM305]
 gi|240296494|gb|EER47126.1| thymidylate synthase [Actinobacillus minor NM305]
          Length = 283

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G    + RTG    +     + +D+ KG FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVSNERTGKRCLTVINADLTYDVEKGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG S+ +     G   WD  A+++             ++G +YG   R++P  +G
Sbjct: 61  LLGYIRGYSSAADFRTLGTKSWDANANENSAWLANPHRKGEDDMGLVYGAIGRNFPKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L     +R  I + ++    +   L PC     F + +GKL     QR
Sbjct: 121 GSVDLLRQIVDDLSRGIDNRGEIYTFYHPGAFELGCLRPCLHSHHFSLLDGKLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHEAGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
           + P++IINP I  L         +DF +  YE H +I    SV
Sbjct: 241 SAPKLIINPKIKSLEDLETWVTLDDFRVEGYEYHPSIQYPFSV 283


>gi|163803536|ref|ZP_02197405.1| thymidylate synthase [Vibrio sp. AND4]
 gi|159172671|gb|EDP57524.1| thymidylate synthase [Vibrio sp. AND4]
          Length = 283

 Score =  254 bits (650), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G+    +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGTWVENERTGKRCLTVINADLSYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEEFRKLGTKTWDANANLNEAWLNNPFRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF-EQADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLAPMRDIQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
                 INP I  L         +DF +  YE H  I    SV
Sbjct: 241 KAATFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIQYPFSV 283


>gi|94501822|ref|ZP_01308334.1| thymidylate synthase [Oceanobacter sp. RED65]
 gi|94426043|gb|EAT11039.1| thymidylate synthase [Oceanobacter sp. RED65]
          Length = 283

 Score =  254 bits (650), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 85/283 (30%), Positives = 126/283 (44%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G    + RTG    +     + + +    FPL+TT+K  +K+ + E
Sbjct: 1   MRQYLDLCQRIIDEGVWINNERTGKRCLTVVNADLEYRVDRNEFPLVTTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWPDYDG 106
            L ++RG  + +     G   WD                 + ++G +YGVQ R W   DG
Sbjct: 61  FLGYIRGYDSAADFRNIGCKTWDANANLNDAWLDNPHRKGEDDMGRVYGVQGRRWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV +L      R  I+S +N        L PC     F +    L    YQR
Sbjct: 121 GHIDQLRKIVDNLSKGIDDRGEIMSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNQVQVYFFLAIMAQITGHKPGVAYHKIVNAHIYEDQLELMRDVQLKRKPY 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++IINP+I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PSPKLIINPDIKSLEDLETWVTVDDFQVEGYQYHDPIAYPFSV 283


>gi|167464449|ref|ZP_02329538.1| Thymidylate synthase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 230

 Score =  254 bits (650), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 97/179 (54%), Positives = 125/179 (69%)

Query: 86  KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
           + G+LG +YG QWR+W   +G  IDQ+  I+ +++ +P SRR IVSAWN   I  M LPP
Sbjct: 52  EFGDLGNVYGKQWRAWKTSNGQTIDQLRDIINTIKINPDSRRLIVSAWNPEDIPSMVLPP 111

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           CH LFQFYV  G+LSCQLYQRS D+FLG+PFNIASY+LLT ++A   G + GEFIHTLGD
Sbjct: 112 CHTLFQFYVTRGRLSCQLYQRSADIFLGVPFNIASYALLTHLIAHECGIEAGEFIHTLGD 171

Query: 206 VHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            H+Y+NH +Q  LQLSR P+ LP + INP +  +      D  L  Y+PH +I A V+V
Sbjct: 172 AHVYSNHVDQVKLQLSREPKQLPSLYINPEVSSVFDAVVGDIRLEGYDPHPSIKAPVAV 230


>gi|114564106|ref|YP_751620.1| thymidylate synthase [Shewanella frigidimarina NCIMB 400]
 gi|122299026|sp|Q07YY3|TYSY_SHEFN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|114335399|gb|ABI72781.1| thymidylate synthase [Shewanella frigidimarina NCIMB 400]
          Length = 283

 Score =  254 bits (650), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G    + RT     +     + +D+ +  FPL+TT+K  WKS + E
Sbjct: 1   MKQYLDLCKRIVDEGEWVNNARTNKKCLTVINADLVYDVGNNQFPLVTTRKSFWKSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L +LRG  N +     G   WD  A+++             ++G IYG   R++P  DG
Sbjct: 61  ILGYLRGYQNAADFRALGTKTWDANANENQAWLDNPNRKGPDDMGLIYGALGRAFPKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L     +R  I++ ++    D   L PC     F +    L     QR
Sbjct: 121 GHVDLLQQIVDDLSNGIDNRGEILTFYHPGAFDLGCLRPCMYEHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA-DLQLSRSPR 225
           S DV LG+ FN+    +L  ++A + G + G+  H + + H+Y +  E   D+QL+R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVLLALMAQITGHKPGKAYHKIVNAHIYEDQLEPMRDVQLAREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++IINP I  L         +DF++  Y+ H AI    +V
Sbjct: 241 ASPKLIINPKIKTLKDIETWVTLDDFSVEDYQHHDAIKYPFAV 283


>gi|223041713|ref|ZP_03611907.1| thymidylate synthase [Actinobacillus minor 202]
 gi|223017457|gb|EEF15874.1| thymidylate synthase [Actinobacillus minor 202]
          Length = 283

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + +D+ KG FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVANERTGKRCLTVINADLTYDVEKGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG S+ +     G   WD  A+++             ++G +YG   R++P  +G
Sbjct: 61  LLGYIRGYSSAADFRALGTKSWDANANENSAWLANPHRKGEDDMGLVYGAIGRNYPKPNG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L     +R  I + ++    +   L PC     F + +GKL     QR
Sbjct: 121 GSVDLLRQIVDDLSRGIDNRGEIYTFYHPGAFELGCLRPCLHSHHFSLLDGKLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHEAGQAFHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
           + P++IINP I  L         +DF +  YE H +I    SV
Sbjct: 241 SAPKLIINPEIKSLEDLETWVTLDDFRVEGYEYHPSIQYPFSV 283


>gi|260771141|ref|ZP_05880068.1| thymidylate synthase [Vibrio furnissii CIP 102972]
 gi|260613738|gb|EEX38930.1| thymidylate synthase [Vibrio furnissii CIP 102972]
 gi|315179253|gb|ADT86167.1| thymidylate synthase [Vibrio furnissii NCTC 11218]
          Length = 283

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDEGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +     G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRALGTKTWDANANLNDAWLNNPHRQGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHVDQLKKIVDDLTRGVDDRGEILNFYNPGEFHLGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAYHKIVNAHIYEDQLALMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INPNI  L         +DF +  YE H  I    SV
Sbjct: 241 AAPQFHINPNIKSLHDLETWVTLDDFDVTGYEFHEPIQYPFSV 283


>gi|190149384|ref|YP_001967909.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307244923|ref|ZP_07527020.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307253877|ref|ZP_07535729.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307258331|ref|ZP_07540072.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|307260572|ref|ZP_07542264.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|307262702|ref|ZP_07544330.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|189914515|gb|ACE60767.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306854088|gb|EFM86296.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306863081|gb|EFM95023.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306867515|gb|EFM99362.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306869649|gb|EFN01434.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306871957|gb|EFN03673.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 283

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + ++++ G FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P  DG
Sbjct: 61  LLGYIRGYDNAADFRKLGTKSWDANANQNSAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++  +     L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A + G + G+  H + + H+Y + FE   D+QL R P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP I  L         +DF + SYE H AI    SV
Sbjct: 241 ASPKLWINPAIKSLEDLETWVTLDDFKVESYEYHPAIQYPFSV 283


>gi|313905071|ref|ZP_07838441.1| thymidylate synthase [Eubacterium cellulosolvens 6]
 gi|313470141|gb|EFR65473.1| thymidylate synthase [Eubacterium cellulosolvens 6]
          Length = 282

 Score =  254 bits (649), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 87/276 (31%), Positives = 129/276 (46%), Gaps = 20/276 (7%)

Query: 6   DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           D+ R +I  G             D T   T   FG   R+DL K FP +T ++   KS  
Sbjct: 10  DMCRDIIDHGCSTEGEKVRPHWEDGTSAYTIKKFGVVNRYDLRKEFPAITLRRTAIKSCT 69

Query: 57  HELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
            ELLW  +   +NV  L      IWD WAD++G +G  YG Q      +    +DQ+  +
Sbjct: 70  DELLWIWQKKSNNVKDLK---SHIWDAWADENGTIGKAYGYQLGVKYKFPEGEMDQVDRL 126

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRSGD 169
           +  L+ +PYSRR + S +N   + +MAL PC     F V          L+  L QRS D
Sbjct: 127 IYDLKNNPYSRRILTSIYNFQDLHEMALYPCAYSMTFNVTKEPGSEKLVLNSILNQRSQD 186

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           +     +N+  Y++LTMM+A   G   GEF+H + D H+Y+ H    +  ++R     P+
Sbjct: 187 ILTANNWNVCQYAILTMMIAQTCGMIPGEFMHVIADAHIYDRHIPLVEELITREQYPAPK 246

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           + +NP I D   F  +D  +  Y     I    V+V
Sbjct: 247 VHLNPEITDFYQFTPDDVIVEDYVTGPQIKNIPVAV 282


>gi|165975571|ref|YP_001651164.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303251939|ref|ZP_07338110.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247098|ref|ZP_07529150.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|165875672|gb|ABY68720.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|302649369|gb|EFL79554.1| thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306856347|gb|EFM88498.1| Thymidylate synthase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 283

 Score =  254 bits (649), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G     +RTG    +     + ++++ G FPL+TT++  WK+ + E
Sbjct: 1   MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R++P  DG
Sbjct: 61  LLGYIRGYDNAADFRKLGTKSWDANANQNLAWLANPYRKGEDDMGLVYGAVGRNFPKADG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L+    +R  I + ++  +     L PC     F + +G L     QR
Sbjct: 121 GSVDLLRQIVDDLKKGVDNRGEIYTFYHPGVFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A + G + G+  H + + H+Y + FE   D+QL R P 
Sbjct: 181 SADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQFELMRDVQLKRKPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P++ INP I  L         +DF + SYE H AI    SV
Sbjct: 241 ASPKLWINPAIKSLEDLETWVTLDDFKVESYEYHPAIQYPFSV 283


>gi|90407304|ref|ZP_01215490.1| putative thymidylate synthetase (thyA) [Psychromonas sp. CNPT3]
 gi|90311587|gb|EAS39686.1| putative thymidylate synthetase (thyA) [Psychromonas sp. CNPT3]
          Length = 283

 Score =  254 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G    + RT     +     + +D+    FP++TT+K  ++S + E
Sbjct: 1   MKQYLDLCKRIVEQGHWIENARTAKRCLTVINADLEYDVGNNKFPMITTRKSFYRSAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
            L ++RG  N +     G   WD  A+ +             ++G +YG+Q RSW ++DG
Sbjct: 61  FLGYIRGYDNAADFRALGTKTWDANANLNKAWLNNPVRKGEDDMGRVYGIQARSWKNHDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  +V +L+     R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 SHLDQLKKVVDNLKQGIDDRAEIITFYNPGEFDLGCLRPCMHTHTFSLIGDTLHLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN         ++A + G + G   H + + H+Y +      D+QL+R P 
Sbjct: 181 SCDVPLGLNFNQVQVFTFLALMAQITGKKAGMAYHKIVNAHIYEDQLALMRDVQLTRQPF 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
             P++IINP I  L         +DF++  Y+ H  I    SV
Sbjct: 241 ASPKLIINPKIQSLEDLETWVSMDDFSIEDYQHHDPIKYPFSV 283


>gi|284008551|emb|CBA75098.1| thymidylate synthase [Arsenophonus nasoniae]
          Length = 283

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 90/283 (31%), Positives = 142/283 (50%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + +I  G    + RTGV   +     + +D++   FPL+TT+K  +K+ + E
Sbjct: 1   MKQYLDLCQRIIDEGQWIENKRTGVRCLTIINADLEYDVANNQFPLITTRKSFYKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG S+ +     G + W+  A+++             ++G +YGVQ RSW   DG
Sbjct: 61  LLGYLRGYSSAAQFRDIGCNTWNANANENQAWLNNPNRKGEDDMGRVYGVQGRSWQRPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  ++ +L      R  I++ +N    +   L PC     F +  G L    YQR
Sbjct: 121 TYLDQLQKVISNLSVGIDDRAEIITFYNPGEFELGCLRPCMHTHTFSLLAGTLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A + G + G+  H + + H+Y N      D+QL R+P 
Sbjct: 181 SCDVPLGLNFNQIQCFVLLALIAQITGHKPGKVYHKIVNAHIYENQLSIMRDIQLKRAPY 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
           +LPQ+ INP+I  L          DF +  Y+ H AI    +V
Sbjct: 241 SLPQLQINPDIKTLKDIETWVSSHDFQVIGYQYHDAIKYPFTV 283


>gi|167745365|ref|ZP_02417492.1| hypothetical protein ANACAC_00056 [Anaerostipes caccae DSM 14662]
 gi|317473091|ref|ZP_07932390.1| thymidylate synthase [Anaerostipes sp. 3_2_56FAA]
 gi|167655086|gb|EDR99215.1| hypothetical protein ANACAC_00056 [Anaerostipes caccae DSM 14662]
 gi|316899429|gb|EFV21444.1| thymidylate synthase [Anaerostipes sp. 3_2_56FAA]
          Length = 282

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 87/278 (31%), Positives = 137/278 (49%), Gaps = 20/278 (7%)

Query: 4   YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R +++ G+            D T   T   FG   R+DLSK FP LT +K   KS
Sbjct: 8   FINMCRDILENGTSTEGEKVRPKWPDGTPAYTIKQFGVVNRYDLSKEFPALTLRKTFVKS 67

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            V ELLW  +   +N+  L      +WDEWAD+DG +G  YG Q R    Y   ++DQ+ 
Sbjct: 68  AVDELLWIWQRKSNNIHDLK---SHVWDEWADEDGSIGKAYGYQMRVKHQYAEGMMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V          L+  L QRS
Sbjct: 125 RVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKPGHEKLVLNGILNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  YS+L  MLA V G + GEF+H + D H+Y+ H    +  + R     
Sbjct: 185 QDILAANNWNVVQYSVLLYMLAQVCGMEPGEFVHVIADAHIYDRHIPIIEELIKRPVYDA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           P+  +NP++ D   F  +DF +  Y+    I    +++
Sbjct: 245 PKFSMNPDVKDFYEFTLDDFKIEDYKAGEQIKDIPIAI 282


>gi|153810935|ref|ZP_01963603.1| hypothetical protein RUMOBE_01325 [Ruminococcus obeum ATCC 29174]
 gi|149832823|gb|EDM87906.1| hypothetical protein RUMOBE_01325 [Ruminococcus obeum ATCC 29174]
          Length = 282

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 85/278 (30%), Positives = 136/278 (48%), Gaps = 20/278 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R VI+ G+            D T   T   FG   R+DL K FP LT ++   KS
Sbjct: 8   FINMCRDVIENGTSTEGEKVRPVWEDGTSAYTIKRFGVVNRYDLRKEFPALTLRRTALKS 67

Query: 55  VVHELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + E+LW  +   +N+  LH     IWD WAD++G +G  YG Q      Y   ++DQ+ 
Sbjct: 68  AMDEILWIWQKKSNNIKDLH---SHIWDSWADENGSIGKAYGYQLGVKHQYKEGMMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS
Sbjct: 125 RVLYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKEPGKDKLTLNAILNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  YS+L MM+A V   + GE +H + D H+Y+ H       +SR+P   
Sbjct: 185 QDILAANNWNVCQYSILLMMIAQVCDMEAGELVHVIADCHIYDRHVPVIKELISRTPYPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           P + +NP I D   F  +D  + +Y+    I    +++
Sbjct: 245 PTVKLNPEIRDFYEFTTDDLIVENYQTWPQIKNIPIAI 282


>gi|332652454|ref|ZP_08418199.1| thymidylate synthase [Ruminococcaceae bacterium D16]
 gi|332517600|gb|EGJ47203.1| thymidylate synthase [Ruminococcaceae bacterium D16]
          Length = 276

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 86/273 (31%), Positives = 134/273 (49%), Gaps = 16/273 (5%)

Query: 4   YLDLLRHVIKFGSDRRDR---------TGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++   + ++  G    DR         T   T   FG   R+DL K FP++T +K   KS
Sbjct: 8   FIQTCQDILSKGVWDTDRPVRPRWEDGTPAHTIKLFGVVNRYDLRKEFPIITVRKQFLKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            V ELLW  +  SN   +H+    IWD WAD++G +G  YG Q      Y    +DQ+  
Sbjct: 68  AVDELLWIWQKKSN--DVHQLSSHIWDAWADENGTIGKAYGYQLGVKHHYPQGDMDQVDK 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
           ++  L+ DP SRR + + +N   + +MAL PC     F V    L+  L QRS D+    
Sbjct: 126 VLWDLKHDPGSRRILTNLYNHHDLSEMALYPCAYSMTFNVSGNTLNGILNQRSQDMLTAN 185

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
            +N+  Y++L  M A V G + GE +H + D H+Y+ H    +  ++R P   P+ I++ 
Sbjct: 186 GWNVMQYAVLLHMFAQVSGLEAGELVHVIADAHIYDRHVPIVEEIIARQPYDAPKFIMDK 245

Query: 235 NIVDLLSFRYEDFTLRSYEPHA---AILAKVSV 264
           ++ D  +F  + F L  Y+ H     I   V+V
Sbjct: 246 SVTDFYAFTKDSFRLEGYQAHPLEEKI--PVAV 276


>gi|311977889|ref|YP_003987009.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Acanthamoeba polyphaga mimivirus]
 gi|82000169|sp|Q5UQG3|DRTS_MIMIV RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase
 gi|55417112|gb|AAV50762.1| thymidylate synthase [Acanthamoeba polyphaga mimivirus]
 gi|308204867|gb|ADO18668.1| bifunctional dihydrofolate reductase-thymidylate synthase
           [Acanthamoeba polyphaga mimivirus]
          Length = 563

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 96/292 (32%), Positives = 166/292 (56%), Gaps = 34/292 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +QY++L++ +++ G  ++ R  + T+S FGYQ+++DLSKG+P+ T K+ + K++  EL+W
Sbjct: 273 NQYIELVKTIMEKGIVKQTRNSI-TKSIFGYQLKYDLSKGYPIQTIKRSYPKAIFEELMW 331

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD-----------GELGPIYGVQWRSWP-------- 102
            +RG ++VS L + GV +WD+ + KD           G++GP YG Q R W         
Sbjct: 332 MIRGQTDVSILQKKGVHVWDKNSSKDFLSKYNLPYEEGDIGPGYGFQMRYWGAEYTDCKT 391

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD------- 155
            Y G  IDQ++  ++S++ +P+ RR +++ WN + +DKMAL PCH  + F VD       
Sbjct: 392 SYQGQGIDQLNKCIESIQNNPHDRRIMINLWNCSDLDKMALAPCHFCYMFGVDLYEVPTT 451

Query: 156 ---NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
               G+L+C L QRS DV LG  +N  + +LLT ++A+      G  +H++ D H+Y +H
Sbjct: 452 SGKKGRLNCHLVQRSWDVLLG--WNTTTAALLTYLIANHCDLDPGILVHSISDAHIYQSH 509

Query: 213 FE--QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
            +       L R  R  P ++I      +  + ++D  + +Y P  +I A++
Sbjct: 510 IDSGAISQLLQRKCRKFPNLVIRNKKEKIDDYEFDDLIIENYYPCPSISAEM 561


>gi|323497789|ref|ZP_08102803.1| thymidylate synthase [Vibrio sinaloensis DSM 21326]
 gi|323317136|gb|EGA70133.1| thymidylate synthase [Vibrio sinaloensis DSM 21326]
          Length = 283

 Score =  252 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGEWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNEAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G+  H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKAGQAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
                 INPNI  L         +DF +  Y  H  I    SV
Sbjct: 241 DAATFHINPNIKSLEDLETWVTLDDFWVEGYAHHDPIQYPFSV 283


>gi|254226521|ref|ZP_04920104.1| thymidylate synthase [Vibrio cholerae V51]
 gi|262190229|ref|ZP_06048504.1| thymidylate synthase [Vibrio cholerae CT 5369-93]
 gi|125620925|gb|EAZ49276.1| thymidylate synthase [Vibrio cholerae V51]
 gi|262033898|gb|EEY52363.1| thymidylate synthase [Vibrio cholerae CT 5369-93]
          Length = 283

 Score =  252 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|260775159|ref|ZP_05884057.1| thymidylate synthase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608860|gb|EEX35022.1| thymidylate synthase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 283

 Score =  252 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58
           M QYLDL + +++ G     +RTG    +     + +D+    FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVEQGEWIENERTGKRCLTVINADLTYDVGHNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  +     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDSAEDFRKLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAIMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             P+  INP+I  L         +DF +  YE H  I    SV
Sbjct: 241 ASPRFHINPDIKSLEDLETWVTLDDFWVEGYEYHDPIQYPFSV 283


>gi|253579644|ref|ZP_04856913.1| thymidylate synthase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849145|gb|EES77106.1| thymidylate synthase [Ruminococcus sp. 5_1_39BFAA]
          Length = 282

 Score =  252 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 18/277 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++ + + +++ G+            D T   T   FG   R+DL K FP +T ++   KS
Sbjct: 8   FIKMCQDILENGTSTEGEKVRPVWEDGTPAYTIKKFGVVNRYDLRKEFPAMTLRRTALKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            + E+LW  +  SN   +H     IWD WAD+ G +G  YG Q      Y   ++DQ+  
Sbjct: 68  AMDEILWIWQKKSN--NIHDLHSHIWDSWADESGSIGKAYGYQLGVKHQYKEGMMDQVDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSG 168
           ++  L+ +P+SRR + + +    + +M L PC     F V      D   L+  L QRS 
Sbjct: 126 VIYDLKNNPFSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTQTPGNDKLTLNAILNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+     +N+  Y+LL MM+A V   + GE +H + D H+Y+ H       + R P   P
Sbjct: 186 DILAANNWNVCQYALLLMMVAQVCDMEAGELLHVVADCHIYDRHIPLIKELIQRKPYPAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            + +NP + D   F  +D  + +YE    I    ++V
Sbjct: 246 VVKLNPEVKDFYQFTTDDLIVENYETWPQIKNIPIAV 282


>gi|121730081|ref|ZP_01682486.1| thymidylate synthase [Vibrio cholerae V52]
 gi|147673512|ref|YP_001216170.1| thymidylate synthase [Vibrio cholerae O395]
 gi|153216952|ref|ZP_01950716.1| thymidylate synthase [Vibrio cholerae 1587]
 gi|153826528|ref|ZP_01979195.1| thymidylate synthase [Vibrio cholerae MZO-2]
 gi|262169974|ref|ZP_06037664.1| thymidylate synthase [Vibrio cholerae RC27]
 gi|172047693|sp|A5F8Y6|TYSY_VIBC3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|3201565|emb|CAA07073.1| thymidylate synthetase [Vibrio cholerae]
 gi|121628168|gb|EAX60695.1| thymidylate synthase [Vibrio cholerae V52]
 gi|124114017|gb|EAY32837.1| thymidylate synthase [Vibrio cholerae 1587]
 gi|146315395|gb|ABQ19934.1| thymidylate synthase [Vibrio cholerae O395]
 gi|149739708|gb|EDM53915.1| thymidylate synthase [Vibrio cholerae MZO-2]
 gi|227012500|gb|ACP08710.1| thymidylate synthase [Vibrio cholerae O395]
 gi|262021708|gb|EEY40419.1| thymidylate synthase [Vibrio cholerae RC27]
          Length = 283

 Score =  252 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|229512935|ref|ZP_04402402.1| thymidylate synthase [Vibrio cholerae TMA 21]
 gi|229350184|gb|EEO15137.1| thymidylate synthase [Vibrio cholerae TMA 21]
          Length = 283

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|153803571|ref|ZP_01958157.1| thymidylate synthase [Vibrio cholerae MZO-3]
 gi|124120895|gb|EAY39638.1| thymidylate synthase [Vibrio cholerae MZO-3]
          Length = 283

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 131/283 (46%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INPN+  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPNVKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|153829174|ref|ZP_01981841.1| thymidylate synthase [Vibrio cholerae 623-39]
 gi|229530480|ref|ZP_04419868.1| thymidylate synthase [Vibrio cholerae 12129(1)]
 gi|148875363|gb|EDL73498.1| thymidylate synthase [Vibrio cholerae 623-39]
 gi|229332253|gb|EEN97741.1| thymidylate synthase [Vibrio cholerae 12129(1)]
          Length = 283

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQVWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|229525326|ref|ZP_04414731.1| thymidylate synthase [Vibrio cholerae bv. albensis VL426]
 gi|229338907|gb|EEO03924.1| thymidylate synthase [Vibrio cholerae bv. albensis VL426]
          Length = 283

 Score =  251 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|262163913|ref|ZP_06031652.1| thymidylate synthase [Vibrio mimicus VM223]
 gi|262027441|gb|EEY46107.1| thymidylate synthase [Vibrio mimicus VM223]
          Length = 283

 Score =  251 bits (641), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLNLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ+ INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 AAPQLHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283


>gi|210616227|ref|ZP_03291007.1| hypothetical protein CLONEX_03226 [Clostridium nexile DSM 1787]
 gi|210149893|gb|EEA80902.1| hypothetical protein CLONEX_03226 [Clostridium nexile DSM 1787]
          Length = 282

 Score =  251 bits (641), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 90/280 (32%), Positives = 133/280 (47%), Gaps = 20/280 (7%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++D+ R +I  G             D +   T   F    R+DLSK FP LT ++   
Sbjct: 6   KVFIDMCRDIIDNGVSTEGEKVRPKWEDGSFAYTLKKFCVVNRYDLSKEFPALTLRRTGI 65

Query: 53  KSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQ 111
           KS V ELLW  +   +NV  L      IWD WAD+DG +G  YG Q      Y   ++DQ
Sbjct: 66  KSCVDELLWIWQRKSNNVHDLK---PHIWDSWADEDGSIGKAYGYQMSVKHQYKEGMMDQ 122

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQ 165
           +  ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L Q
Sbjct: 123 VDRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKNDSDKLVLNGILNQ 182

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DV     +N+  Y++L  MLA V   Q GEF+H + D H+Y+ H    +  +SR P 
Sbjct: 183 RSQDVLAANNWNVCQYAVLMHMLAQVCDMQVGEFVHVIADAHIYDRHIPLVEELISREPL 242

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
             P   +NP + +   F  +D  L +YE  + I    ++V
Sbjct: 243 PAPTFWLNPEVKNFYEFTPDDVRLDNYETGSQIKNIPIAV 282


>gi|15640694|ref|NP_230324.1| thymidylate synthase [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121591333|ref|ZP_01678622.1| thymidylate synthase [Vibrio cholerae 2740-80]
 gi|153820133|ref|ZP_01972800.1| thymidylate synthase [Vibrio cholerae NCTC 8457]
 gi|153823743|ref|ZP_01976410.1| thymidylate synthase [Vibrio cholerae B33]
 gi|227080856|ref|YP_002809407.1| thymidylate synthase [Vibrio cholerae M66-2]
 gi|229505705|ref|ZP_04395215.1| thymidylate synthase [Vibrio cholerae BX 330286]
 gi|229508721|ref|ZP_04398214.1| thymidylate synthase [Vibrio cholerae B33]
 gi|229519529|ref|ZP_04408972.1| thymidylate synthase [Vibrio cholerae RC9]
 gi|229608724|ref|YP_002879372.1| thymidylate synthase [Vibrio cholerae MJ-1236]
 gi|254851007|ref|ZP_05240357.1| thymidylate synthase [Vibrio cholerae MO10]
 gi|255743866|ref|ZP_05417822.1| thymidylate synthase [Vibrio cholera CIRS 101]
 gi|262156085|ref|ZP_06029204.1| thymidylate synthase [Vibrio cholerae INDRE 91/1]
 gi|297580799|ref|ZP_06942725.1| thymidylate synthase [Vibrio cholerae RC385]
 gi|298500789|ref|ZP_07010592.1| thymidylate synthase [Vibrio cholerae MAK 757]
 gi|6686061|sp|O66108|TYSY_VIBCH RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790256|sp|C3LST0|TYSY_VIBCM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|3114981|emb|CAA76645.1| thymidilate synthase [Vibrio cholerae]
 gi|9655113|gb|AAF93840.1| thymidylate synthase [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121546814|gb|EAX56979.1| thymidylate synthase [Vibrio cholerae 2740-80]
 gi|126509325|gb|EAZ71919.1| thymidylate synthase [Vibrio cholerae NCTC 8457]
 gi|126518737|gb|EAZ75960.1| thymidylate synthase [Vibrio cholerae B33]
 gi|227008744|gb|ACP04956.1| thymidylate synthase [Vibrio cholerae M66-2]
 gi|229344218|gb|EEO09193.1| thymidylate synthase [Vibrio cholerae RC9]
 gi|229354245|gb|EEO19175.1| thymidylate synthase [Vibrio cholerae B33]
 gi|229357928|gb|EEO22845.1| thymidylate synthase [Vibrio cholerae BX 330286]
 gi|229371379|gb|ACQ61802.1| thymidylate synthase [Vibrio cholerae MJ-1236]
 gi|254846712|gb|EET25126.1| thymidylate synthase [Vibrio cholerae MO10]
 gi|255738497|gb|EET93886.1| thymidylate synthase [Vibrio cholera CIRS 101]
 gi|262030121|gb|EEY48766.1| thymidylate synthase [Vibrio cholerae INDRE 91/1]
 gi|297535215|gb|EFH74050.1| thymidylate synthase [Vibrio cholerae RC385]
 gi|297540570|gb|EFH76628.1| thymidylate synthase [Vibrio cholerae MAK 757]
 gi|327483475|gb|AEA77882.1| Thymidylate synthase [Vibrio cholerae LMA3894-4]
          Length = 283

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|262172248|ref|ZP_06039926.1| thymidylate synthase [Vibrio mimicus MB-451]
 gi|261893324|gb|EEY39310.1| thymidylate synthase [Vibrio mimicus MB-451]
          Length = 283

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLNLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283


>gi|229520965|ref|ZP_04410387.1| thymidylate synthase [Vibrio cholerae TM 11079-80]
 gi|254291915|ref|ZP_04962697.1| thymidylate synthase [Vibrio cholerae AM-19226]
 gi|150422201|gb|EDN14166.1| thymidylate synthase [Vibrio cholerae AM-19226]
 gi|229342198|gb|EEO07194.1| thymidylate synthase [Vibrio cholerae TM 11079-80]
          Length = 283

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLHDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|258620343|ref|ZP_05715381.1| thymidylate synthase [Vibrio mimicus VM573]
 gi|258587222|gb|EEW11933.1| thymidylate synthase [Vibrio mimicus VM573]
          Length = 283

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWTKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283


>gi|296222344|ref|XP_002757146.1| PREDICTED: thymidylate synthase-like isoform 3 [Callithrix jacchus]
          Length = 230

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 88/192 (45%), Positives = 121/192 (63%), Gaps = 5/192 (2%)

Query: 78  SIWDEWADKDGELGP----IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
            I      KD   G     ++G+Q R S  DY G  +DQ+  ++ +++ +P  RR I+ A
Sbjct: 39  HILRCGVRKDDRTGTGTLSVFGMQARYSLRDYSGQGVDQLQRVIDTIKTNPDDRRIIMCA 98

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH L QFYV NG+LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + 
Sbjct: 99  WNPRDLPLMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHIT 158

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + G+F+HTLGD H+Y NH E   +QL R PR  P++ I   +  +  F+ EDF +  Y
Sbjct: 159 GLKPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFKVEGY 218

Query: 253 EPHAAILAKVSV 264
            PH  I  +++V
Sbjct: 219 NPHPTIKMEMAV 230



 Score = 60.7 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 3  QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK 40
          QYL  + H+++ G  + DRTG GT S FG Q R+ L  
Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRD 69


>gi|258624715|ref|ZP_05719649.1| thymidylate synthase [Vibrio mimicus VM603]
 gi|258583002|gb|EEW07817.1| thymidylate synthase [Vibrio mimicus VM603]
          Length = 283

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283


>gi|2293410|gb|AAC26325.1| thymidylate synthase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 230

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 90/231 (38%), Positives = 138/231 (59%), Gaps = 3/231 (1%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIY 94
           FD S+  P+LTTKKV WK+ + ELLW  +   ++V+ L++ GV IWD+W  +DG +G  Y
Sbjct: 1   FDNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAY 59

Query: 95  GVQWRSW-PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           G Q      + +G  +DQ+  ++  L+ +P SRRHI   W+   +D MAL PC    Q+Y
Sbjct: 60  GFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWSPDELDSMALTPCVYETQWY 119

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V  GKL  ++  RS D+ LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H 
Sbjct: 120 VKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHI 179

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +   +Q+ R     P++ INP + D   F  +DF L +Y+    +L +V+V
Sbjct: 180 DNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLFNYKHGDKLLFEVAV 230


>gi|262401626|ref|ZP_06078192.1| thymidylate synthase [Vibrio sp. RC586]
 gi|262352043|gb|EEZ01173.1| thymidylate synthase [Vibrio sp. RC586]
          Length = 283

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MQQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  +   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLDLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H AI    SV
Sbjct: 241 PAPQFHINPEIKTLHDLETWVTLDDFEVTGYQFHDAIQYPFSV 283


>gi|261212215|ref|ZP_05926501.1| thymidylate synthase [Vibrio sp. RC341]
 gi|260838823|gb|EEX65474.1| thymidylate synthase [Vibrio sp. RC341]
          Length = 283

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYL+L + ++  G     +RT     +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLELCQRIVDQGVWVENERTAKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GQIDQLKKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +      D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGMAYHKIVNAHIYEDQLPLMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP+I  L         +DF +  YE H AI    SV
Sbjct: 241 AAPQFHINPDIKTLHDLETWVTLDDFEVTGYEFHDAIQYPFSV 283


>gi|167766809|ref|ZP_02438862.1| hypothetical protein CLOSS21_01317 [Clostridium sp. SS2/1]
 gi|317498799|ref|ZP_07957087.1| thymidylate synthase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711563|gb|EDS22142.1| hypothetical protein CLOSS21_01317 [Clostridium sp. SS2/1]
 gi|291560612|emb|CBL39412.1| thymidylate synthase [butyrate-producing bacterium SSC/2]
 gi|316893934|gb|EFV16128.1| thymidylate synthase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 282

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 20/278 (7%)

Query: 4   YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++ +   +++ G+            D     T   FG   R+DLSK FP LT +K + KS
Sbjct: 8   FISMCEDILENGTSTEGEKVRPHWPDGESAYTIKQFGVVNRYDLSKEFPALTLRKTYIKS 67

Query: 55  VVHELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + ELLW  +   +NV+ L      IWDEWAD+DG +G  YG Q      Y   ++DQ+ 
Sbjct: 68  AIDELLWIWQKKSNNVNDLK---SHIWDEWADEDGSIGKAYGYQMGVKHQYKEGMMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS
Sbjct: 125 RVIYDLKHNPYSRRIMTNIYVHQDLHEMNLYPCAYSVTFNVTKKPGHDKLTLNAILNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  Y+ L  M+A V   + GE +H + D H+Y+ H       + R     
Sbjct: 185 QDILAANNWNVVQYAALVYMMAQVCDMEPGELVHVIADAHIYDRHIPIIKEMIKRETYPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           P++ +NP + D   F  +DF +  Y+    I    +++
Sbjct: 245 PKVTLNPEVKDFYEFTTDDFKIEDYQAGEQIKDIPIAI 282


>gi|260771789|ref|ZP_05880707.1| thymidylate synthase [Vibrio metschnikovii CIP 69.14]
 gi|260613081|gb|EEX38282.1| thymidylate synthase [Vibrio metschnikovii CIP 69.14]
          Length = 283

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WKS V E
Sbjct: 1   MKQYLDLCQRIVDQGIWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKSAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  + +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDSAADFRQLGTKTWDANANMNAAWLANPYRQGEDDMGRVYGVQGRAWTKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLTRGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLAVMAQITGKKPGLAYHKIVNAHIYEDQLELMRDVQLKRHPL 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
              Q  INP I  L         +DF++  Y+ H  I    SV
Sbjct: 241 PAAQFHINPEIRSLEDLETWVTLDDFSVTDYQHHDPIQYPFSV 283


>gi|302671643|ref|YP_003831603.1| thymidylate synthase ThyA [Butyrivibrio proteoclasticus B316]
 gi|302396116|gb|ADL35021.1| thymidylate synthase ThyA [Butyrivibrio proteoclasticus B316]
          Length = 283

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 83/265 (31%), Positives = 127/265 (47%), Gaps = 17/265 (6%)

Query: 4   YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ + +++ G+            D T   T   FG   R+DLSK FP++T +K   KS
Sbjct: 8   FINMCKDILENGTSTEGEKVRPHWPDGTPAYTIKKFGVVNRYDLSKEFPIMTLRKTALKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
              E+LW  +  SN   +H     IWDEWAD+ G +G  YG Q      Y     DQI  
Sbjct: 68  ATDEILWIYQKKSN--NIHDLNSHIWDEWADETGSIGKAYGYQIGQKSIYKEGEFDQIDR 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168
           ++  L+ +P+SRR + + +  + + +M L PC     + V   K      L+  L QRS 
Sbjct: 126 VIYDLKNNPFSRRIMTNTYVFSDLHEMNLYPCAYSVTYNVTQKKGEDKLTLNAILNQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           DV     +N+  Y++L  MLA V     GE +H + D H+Y+ H       + R P   P
Sbjct: 186 DVLAANNWNVVQYAVLVHMLAQVCDMNVGELVHVIADAHIYDRHVPLIKELIERKPLPAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYE 253
           +  +NP+I D   F   D +L  YE
Sbjct: 246 KFHLNPDIKDFYEFTRNDVSLEGYE 270


>gi|154500728|ref|ZP_02038766.1| hypothetical protein BACCAP_04406 [Bacteroides capillosus ATCC
           29799]
 gi|150270617|gb|EDM97926.1| hypothetical protein BACCAP_04406 [Bacteroides capillosus ATCC
           29799]
          Length = 276

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 12/267 (4%)

Query: 8   LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
            + ++  G+            D     T   FG   R+DL K FP+ T +K+ +KS + E
Sbjct: 12  CKDILAHGTWDTDQAVRPRWDDGASAHTIKLFGVVNRYDLKKEFPVQTIRKMAFKSSLDE 71

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
           LLW  +  SN   +H     IWD WAD++G +G  YG Q      Y     DQ+  ++  
Sbjct: 72  LLWIWQKKSN--NIHDLNSHIWDAWADENGSIGKAYGYQLGVKHVYPEGEFDQVDRVLYD 129

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           L+ +P SRR + + +N   + +MAL PC     F V    L+  L QRS D+     +N+
Sbjct: 130 LKHNPASRRIMTNLYNHHDLHEMALYPCAYSMTFNVTGKTLNAILNQRSQDMLTANGWNV 189

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
             Y+ L  MLA V G + GE +H + D H+Y+ H    +  ++R P   P++ ++  + D
Sbjct: 190 MQYAALVHMLARVSGLEAGELVHVIADAHIYDRHVPIVEEIIARKPYDAPKLWMDTEVDD 249

Query: 239 LLSFRYEDFTLRSYEPHAA-ILAKVSV 264
             +F  +   L  Y+ H   +   V+V
Sbjct: 250 FYAFTRDSLKLEGYQSHPLDVKIPVAV 276


>gi|6707737|sp|O30397|TYSY1_BACAM RecName: Full=Thymidylate synthase 1; Short=TS 1; Short=TSase 1;
           AltName: Full=Thymidylate synthase A; Short=TS A;
           Short=TSase A
 gi|2293412|gb|AAC26326.1| thimidylate synthase [Bacillus amyloliquefaciens]
          Length = 230

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 89/231 (38%), Positives = 136/231 (58%), Gaps = 3/231 (1%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIY 94
           FD S+  P+LTTKK+ WK+ + ELLW  +   ++V+ L++  V IWD+W  +DG +G  Y
Sbjct: 1   FDNSE-VPILTTKKLAWKTAIKELLWIWQLKSNDVNDLNKMSVHIWDQWKQEDGTIGHAY 59

Query: 95  GVQWRSWPDY-DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           G Q        +G  +DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+Y
Sbjct: 60  GFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWY 119

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
           V +GKL  ++  RS D+ LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H 
Sbjct: 120 VKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHI 179

Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +   +Q+ R     P++ INP + D   F  +DF L +Y+    +L +V V
Sbjct: 180 DNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVPV 230


>gi|293115507|ref|ZP_05791824.2| thymidylate synthase [Butyrivibrio crossotus DSM 2876]
 gi|292809488|gb|EFF68693.1| thymidylate synthase [Butyrivibrio crossotus DSM 2876]
          Length = 283

 Score =  247 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++D+ + +++ G             D T   T   FG   R+DLSK FPL+T +K   
Sbjct: 7   KVFIDMCKDILENGVSTEGEKVRPHWEDGTPAYTIKKFGVVNRYDLSKEFPLVTLRKTAL 66

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS   ELLW  +  SN   +H     IWD WAD++G +G  YG Q      Y   ++DQ+
Sbjct: 67  KSATDELLWIWQKKSN--NIHDLHSHIWDAWADENGSIGKAYGYQLGVKHRYKEGMMDQV 124

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166
             ++  L+ +P+SRR + + +    + +M L PC     F V   K      L+  L QR
Sbjct: 125 DRVIYDLKNNPFSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTQKKGEDKLTLNAILNQR 184

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S D+     +N+A Y++L  MLA V   Q GE +H + D H+Y+ H    +  +SR    
Sbjct: 185 SQDILTANNWNVAQYAVLVHMLAQVCDMQVGELVHVIADAHIYDRHIPIVEELISRECYD 244

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P   +NP + D   F  +D ++ +Y     +    V++
Sbjct: 245 APTFHLNPEVKDFYKFTRDDVSVDNYITGPQVTNIPVAI 283


>gi|204789674|gb|ACI02050.1| hypothetical protein [uncultured bacterium]
          Length = 285

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 19/277 (6%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           +++++R ++  G             D T   T   FG   R+DL K  P++T +K   KS
Sbjct: 12  FINMVRDILDNGCSTEGEKVRPHWEDGTSAYTIKKFGVVNRYDLRKECPIITLRKTALKS 71

Query: 55  VVHELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
              ELLW  +   +NV+ L      IWDEWAD+ G +G  YG Q      Y   ++DQ+ 
Sbjct: 72  ATDELLWIWQKKSNNVNELS---SHIWDEWADETGSIGKAYGYQMGVKHQYKEGMMDQVD 128

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRS 167
            ++  L+ +P+SRR + + +    + +M L PC     F V   K      L   L QRS
Sbjct: 129 RVIFDLKNNPFSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTQRKGEDKLTLHAILNQRS 188

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DV     +N+  Y++L  MLA       GEF+H + D H+Y+ H    +  + R     
Sbjct: 189 QDVLTANNWNVVQYAVLVHMLAQCCDMYVGEFMHVIADAHIYDRHIPLVEELIKRPVFDA 248

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P+  +NP+I D   F  +D  +  Y+    I   V++
Sbjct: 249 PKFFMNPDIKDFYKFTKDDVWVEGYQYGEQISIPVAI 285


>gi|114672497|ref|XP_001150227.1| PREDICTED: thymidylate synthetase isoform 1 [Pan troglodytes]
          Length = 230

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 88/192 (45%), Positives = 121/192 (63%), Gaps = 5/192 (2%)

Query: 78  SIWDEWADKDGELGP----IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
            I      KD   G     ++G+Q R S  DY G  +DQ+  ++ +++++P  RR I+ A
Sbjct: 39  HILRCGVRKDDRTGTGTLSVFGMQARYSLRDYSGQGVDQLQRVIDTIKSNPDDRRIIMCA 98

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + 
Sbjct: 99  WNPRDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHIT 158

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + G+FIHTLGD H+Y NH E   +QL R PR  P++ I   +  +  F+ EDF +  Y
Sbjct: 159 GLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLKILRKVEKIDDFKAEDFQIEGY 218

Query: 253 EPHAAILAKVSV 264
            PH  I  +++V
Sbjct: 219 NPHPTIKMEMAV 230



 Score = 60.3 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 3  QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK 40
          QYL  + H+++ G  + DRTG GT S FG Q R+ L  
Sbjct: 32 QYLGQIEHILRCGVRKDDRTGTGTLSVFGMQARYSLRD 69


>gi|322368138|ref|ZP_08042707.1| thymidylate synthase [Haladaptatus paucihalophilus DX253]
 gi|320552154|gb|EFW93799.1| thymidylate synthase [Haladaptatus paucihalophilus DX253]
          Length = 330

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 113/332 (34%), Positives = 157/332 (47%), Gaps = 72/332 (21%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYL L+  V++ G+ + +RTGV T STF      DL +G+PLLTTKK+    W S++H
Sbjct: 1   MKQYLGLVEDVLRDGTYKPNRTGVDTISTFSQHYEVDLREGYPLLTTKKMDGFRWDSMLH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102
           ELLW+L G+ ++  L      IW+EWAD+DG L   YG  WR +P               
Sbjct: 61  ELLWYLSGEEHIRNLREK-TGIWNEWADEDGTLDTAYGRFWRRFPVPEEGLPGESWPEAD 119

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159
                +    DQI  ++  L  +P SRR +VSAW+ A      LPPCH  F   V    L
Sbjct: 120 HRWMNEDGTFDQIQYLIDGLDENPNSRRFVVSAWHPANAAVSTLPPCHYTFVVNVQGDTL 179

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY---------- 209
           +  L QRSGDV LGIPFN+A+Y+LL  +LA   GF+ G+F HT+ D H+Y          
Sbjct: 180 NLHLTQRSGDVALGIPFNVAAYALLATVLARQTGFEVGKFAHTIVDAHVYCGEGDRGEWY 239

Query: 210 --------------------------------------NNHFEQADLQLSRSPRTLPQMI 231
                                                  +H      QLSR+P++ P++ 
Sbjct: 240 RDNLEDLQTRLADVTQKSEYEEVREWLESEAPEEETEAMDHVPGLLTQLSRTPKSRPEIE 299

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           +      +    Y+D  LR Y+ H  I   V+
Sbjct: 300 V--AADSIDELTYDDIVLREYDAHPGIKFSVA 329


>gi|239995918|ref|ZP_04716442.1| thymidylate synthase [Alteromonas macleodii ATCC 27126]
          Length = 182

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 101/181 (55%), Positives = 128/181 (70%), Gaps = 13/181 (7%)

Query: 97  QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID-------------KMAL 143
           QWRSW   DG  +DQI+ +V+ ++ +P SRR IVS WN A++              K AL
Sbjct: 2   QWRSWDRGDGTSVDQIAEVVEQIKNNPDSRRLIVSGWNPAVLPDTNYSPKENAAMGKQAL 61

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           PPCH LFQFYV +GKLSCQLYQRSGD+FLG+PFNIASY+LLTMM+A V   + G+FIHTL
Sbjct: 62  PPCHTLFQFYVLDGKLSCQLYQRSGDIFLGVPFNIASYALLTMMMAQVCDLEPGDFIHTL 121

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           GD HLY+NH EQ +LQLSR P   P M INP + D+  F ++DFTL++Y+ H  I A V+
Sbjct: 122 GDAHLYSNHLEQVELQLSREPFERPTMEINPEVKDIFGFSFDDFTLKNYQSHPHIKAPVA 181

Query: 264 V 264
           +
Sbjct: 182 I 182


>gi|18150849|dbj|BAB83676.1| thymidylate synthase [Homo sapiens]
 gi|119622125|gb|EAX01720.1| thymidylate synthetase, isoform CRA_e [Homo sapiens]
          Length = 230

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 88/192 (45%), Positives = 120/192 (62%), Gaps = 5/192 (2%)

Query: 78  SIWDEWADKDGELGP----IYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
            I      KD   G     ++G+Q R S  DY G  +DQ+  ++ +++ +P  RR I+ A
Sbjct: 39  HILRCGVRKDDRTGTGTLSVFGMQARYSLRDYSGQGVDQLQRVIDTIKTNPDDRRIIMCA 98

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN   +  MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + 
Sbjct: 99  WNPRDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHIT 158

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
           G + G+FIHTLGD H+Y NH E   +QL R PR  P++ I   +  +  F+ EDF +  Y
Sbjct: 159 GLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGY 218

Query: 253 EPHAAILAKVSV 264
            PH  I  +++V
Sbjct: 219 NPHPTIKMEMAV 230



 Score = 60.7 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 3  QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK 40
          QYL  ++H+++ G  + DRTG GT S FG Q R+ L  
Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRD 69


>gi|23343946|gb|AAN16904.1| mutant thymidilate synthetase [Vibrio cholerae]
          Length = 283

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D+ +  FPL+TT+K  WK+ V E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+             + ++G +YGVQ R+W   DG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N        L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV L + FN+    +   ++A + G + G   H + + H+Y +  E   D+QL R P 
Sbjct: 181 SCDVPLWLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             PQ  INP I  L         +DF +  Y+ H  I    SV
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283


>gi|258513542|ref|YP_003189764.1| thymidylate synthase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777247|gb|ACV61141.1| thymidylate synthase [Desulfotomaculum acetoxidans DSM 771]
          Length = 276

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 131/268 (48%), Gaps = 12/268 (4%)

Query: 7   LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
           + + ++  G             D     T   F    R++LS+ FP+LT +  + K+ + 
Sbjct: 11  MCKEILDKGISSEGEEVRAKWTDGMPAHTIKRFAVVNRYNLSEEFPILTLRPTNLKAAID 70

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           ELLW  +  SN   ++    SIWD WA+ +G +G  YG Q      Y     DQ+  I+ 
Sbjct: 71  ELLWIWQKKSN--NINDLNSSIWDSWANDEGSIGKAYGYQLGIKHKYREGEFDQVDRILY 128

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
            LR  PYSRR I + +N + + +M L PC     F V   KL+  L QRS DV +   +N
Sbjct: 129 DLRHTPYSRRIIANMYNHSDLHEMNLYPCAYSMTFNVTGRKLNAILNQRSQDVLVANNWN 188

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           +A Y++L  M A V  F+ GEF+H + D H+Y+ H       + R+    P+++INP+  
Sbjct: 189 VAQYAILIHMFAQVSSFEAGEFVHVIADAHIYDRHIPIIKELIQRTSYPAPRLLINPDKK 248

Query: 238 DLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
               F  +DF L  Y+ +  I    V+V
Sbjct: 249 HFYDFTVDDFLLEGYQTNEQIRNIPVAV 276


>gi|331090655|ref|ZP_08339504.1| thymidylate synthase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330400069|gb|EGG79720.1| thymidylate synthase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 282

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 86/279 (30%), Positives = 130/279 (46%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
             ++++ R +I  G             D +   T   F    R+DLSK FP LT ++   
Sbjct: 6   KVFIEMCRDIIDNGVSTEGEKVRPKWEDGSFAYTMKKFCVVNRYDLSKEFPALTLRRTGI 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS V E+LW  +  SN   ++     IWD WAD+DG +G  YG Q      Y   ++DQ+
Sbjct: 66  KSCVDEMLWIWQKKSN--NINDLNSHIWDSWADEDGSIGKAYGYQMSVKHQYKEGMMDQV 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQR 166
             ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QR
Sbjct: 124 DRVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSVTFNVTKKNDSDKLVLNAILNQR 183

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S DV     +N+  Y++L  MLA V   Q GE +H + D H+Y+ H    +  +SR    
Sbjct: 184 SQDVLAANNWNVCQYAVLVHMLAQVCDMQVGELVHVIADAHIYDRHIPLIEELISRESYP 243

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P   +NP I D   F  +D  L +Y+    I    ++V
Sbjct: 244 APAFWLNPEIKDFYEFTTDDVRLDNYQTGPQIKNIPIAV 282


>gi|257784436|ref|YP_003179653.1| thymidylate synthase [Atopobium parvulum DSM 20469]
 gi|257472943|gb|ACV51062.1| thymidylate synthase [Atopobium parvulum DSM 20469]
          Length = 282

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 20/278 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++D+   +I+ G+            D T   T   FG   R+DL + FP LT ++   KS
Sbjct: 8   FIDMCSDIIENGTTTEGEKVRPTWEDGTSAYTIKKFGVCNRYDLREEFPALTLRRTALKS 67

Query: 55  VVHELLWFLRG-DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + E+LW  +   +NV+ L      IWD WAD+ G +G  YG Q      Y     DQ+ 
Sbjct: 68  AMDEVLWIYQKKSNNVNDL---NSHIWDSWADESGSIGKAYGYQVGQVSHYADGDYDQMD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRS 167
            +++ L+ +P+SRR + + +  A + +M L PC     + V  G       L+  L QRS
Sbjct: 125 RVLKDLKENPFSRRIMTNLYTFADLSEMNLYPCAFNAIYNVTQGAGKNRPTLNLLLVQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  Y++L MM+A V G + GE +H + D H+Y+ H +     +SR     
Sbjct: 185 QDILAANNWNVCQYAILLMMVAQVSGMEAGELVHMIADAHIYDRHVDIVKELISRPTFDA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           P++ +NPNI +   F  +D  +  Y+    +    ++V
Sbjct: 245 PKVSLNPNITNFYDFTTDDLIVEDYQHGPQVKNIPIAV 282


>gi|6686055|sp|O30394|TYSY_BACAT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; AltName:
           Full=Thymidylate synthase A; Short=TS A; Short=TSase A
 gi|2293406|gb|AAC26323.1| thymidylate synthase [Bacillus atrophaeus]
          Length = 227

 Score =  245 bits (625), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 86/226 (38%), Positives = 132/226 (58%), Gaps = 2/226 (0%)

Query: 41  GFPLLTTKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR 99
             P+LTTKK+ WK+ + ELLW  +   ++V+ L++  V IWD+W  +DG +G  YG Q  
Sbjct: 2   EVPILTTKKLAWKTAIKELLWIWQLKSNDVNDLNKMSVHIWDQWKQEDGTIGHAYGFQLG 61

Query: 100 SWPDY-DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK 158
                 +G  +DQ+  ++  L+ +P SRRHI   WN   +D MAL PC    Q+YV +GK
Sbjct: 62  KKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGK 121

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           L  ++  RS D+ LG PFN+  Y++L  M+A V G++ GE+I  +GD H+Y  H +   +
Sbjct: 122 LHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKI 181

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Q+ R     P++ INP + D   F  +DF L +Y+    +L +V V
Sbjct: 182 QMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVRV 227


>gi|239625648|ref|ZP_04668679.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519878|gb|EEQ59744.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 278

 Score =  244 bits (624), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 86/269 (31%), Positives = 127/269 (47%), Gaps = 16/269 (5%)

Query: 8   LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
            R ++  G             D T   T   FG   R+DLSK FP++T ++  +KS V E
Sbjct: 14  CRDILDNGVWDTDYDVRPVWEDGTPAHTIKRFGIVNRYDLSKEFPVITLRRTAFKSAVDE 73

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
           LLW  +  SN   +H     IWD WAD+DG +G  YG Q      Y     DQ+  I+  
Sbjct: 74  LLWIWQKKSN--NIHDLNSHIWDSWADEDGSIGKAYGYQLGVKHHYKEGDFDQVDRILHD 131

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           L+ +P SRR + + +N   + +M L PC     F V    L+  L QRS D+     +N+
Sbjct: 132 LKHNPLSRRIMSNIYNHHDLHEMNLYPCAYSMTFNVSGNTLNGILNQRSQDMLTANSWNV 191

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
             Y++L  M A V G   GE +H + D H+Y+ H    +  L + P   P + ++ +I D
Sbjct: 192 CQYAILLHMFAQVSGLVAGELVHVIADAHIYDRHIPMVEELLKKEPYPGPTLAMDTSITD 251

Query: 239 LLSFRYEDFTLRSYEPHA---AILAKVSV 264
              F    F L +Y+ HA    I   V++
Sbjct: 252 FYQFTTSSFRLENYQYHAFEHKI--PVAI 278


>gi|281335085|gb|ADA62169.1| Thymidylate synthase [Staphylococcus aureus]
          Length = 215

 Score =  244 bits (624), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 101/184 (54%), Positives = 127/184 (69%), Gaps = 1/184 (0%)

Query: 81  DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           D +A K G LG +YG QWR W D +GN  DQ+ S++Q ++ +P SRRHIVSAWN   ID 
Sbjct: 33  DAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAWNPTEIDS 92

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
           MALPPCH +FQFYV  GKL+CQLYQRS D+FLG+PFNIASY+LLT ++A   G + GEFI
Sbjct: 93  MALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECGLEVGEFI 152

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260
           HT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE H AI A
Sbjct: 153 HTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYESHPAIKA 211

Query: 261 KVSV 264
            ++V
Sbjct: 212 PIAV 215


>gi|225572661|ref|ZP_03781416.1| hypothetical protein RUMHYD_00849 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039961|gb|EEG50207.1| hypothetical protein RUMHYD_00849 [Blautia hydrogenotrophica DSM
           10507]
          Length = 324

 Score =  244 bits (624), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 20/278 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++ + + V++ G+            D T   T   FG   R+DL K FP LT +K   KS
Sbjct: 50  FISMCKDVLENGTSTEGEKVRPVWEDGTAAYTIKKFGVVNRYDLRKEFPALTLRKTALKS 109

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
              E+LW  +   +N+  LH     IWD WAD+ G +G  YG Q     +Y   ++DQ+ 
Sbjct: 110 AFDEILWIWQRKSNNIHDLH---SHIWDSWADETGSIGKAYGYQMSVKHEYKEGMMDQVD 166

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V          L+  L QRS
Sbjct: 167 RVLYDLKNNPYSRRIMTNIYVHQDLHEMHLYPCAYSVTFNVTKEPGCEKLTLNAILNQRS 226

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            D+     +N+  Y+LL  M A   G Q GE +H + D H+Y+ H       + R     
Sbjct: 227 QDILAANNWNVCQYALLVHMFAQSCGMQAGELVHVIADCHIYDRHVPVIQELIQRPVYPA 286

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           P + +NP + D   F  +D  + +Y+    +    +++
Sbjct: 287 PTVYLNPEVRDFYQFTVDDLVVENYQAGPQVKNIPIAI 324


>gi|257389045|ref|YP_003178818.1| thymidylate synthase [Halomicrobium mukohataei DSM 12286]
 gi|257171352|gb|ACV49111.1| thymidylate synthase [Halomicrobium mukohataei DSM 12286]
          Length = 334

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 113/336 (33%), Positives = 155/336 (46%), Gaps = 76/336 (22%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYLDL+   ++ G+ + +RTGV T ++F      DL++GFPLLTTK +    W S++H
Sbjct: 1   MQQYLDLVDSTLRGGTYKPNRTGVDTVASFSQHYEVDLAEGFPLLTTKDLSGFRWNSLIH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103
           ELLW+L G+ ++  L      IWD WAD++G L   YG  WR              SWPD
Sbjct: 61  ELLWYLSGEEHIRELREE-TGIWDAWADEEGHLDTAYGRFWRRYPIPDDDARLPGESWPD 119

Query: 104 ------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
                  D    DQ++ ++  L  +P SRR +V+AW+ A      LPPCH  F F V  G
Sbjct: 120 DAHRWVNDDGTFDQLAYVIDQLEENPRSRRLVVNAWHPANATVSTLPPCHYTFVFNVQGG 179

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN------- 210
           +L+  L QRSGD+ LG+PFN+A+YSLL   +A    F+ G F HT+ D H+Y        
Sbjct: 180 RLNVHLTQRSGDIALGVPFNVAAYSLLAQAVAQRTDFELGSFAHTIVDAHVYCGAGARGE 239

Query: 211 -------------------------------------------NHFEQADLQLSRSPRTL 227
                                                      +H      Q +R PR  
Sbjct: 240 WYADNLDGLQERLQHVDAKEDYRAVREWLESTAPAEDDGHEGYDHVPGLLEQCAREPRKR 299

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           P M I      L    Y+DF L  Y+P   I   V+
Sbjct: 300 PTMEIADTP--LDDLTYDDFELHGYDPAPGISFSVA 333


>gi|160938154|ref|ZP_02085510.1| hypothetical protein CLOBOL_03048 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438958|gb|EDP16714.1| hypothetical protein CLOBOL_03048 [Clostridium bolteae ATCC
           BAA-613]
          Length = 287

 Score =  244 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 82/269 (30%), Positives = 128/269 (47%), Gaps = 16/269 (5%)

Query: 8   LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
              +++ G             D T   T   FG   R+DL++ FP++T ++  +KS V E
Sbjct: 23  CNDILEHGVWDTDYDVRPVWEDGTPAHTIKRFGIVNRYDLTREFPVITLRRTAFKSAVDE 82

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
           LLW  +  SN   +H     IWD WAD++G +G  YG Q      Y     DQ+  I+  
Sbjct: 83  LLWIWQKKSN--NIHDLNSHIWDSWADENGSIGKAYGYQLGVKHHYKEGDFDQVDRILYD 140

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           L+ +P SRR + + +N   + +M L PC     F V    L+  L QRS D+     +N+
Sbjct: 141 LKHNPLSRRIMSNIYNHHDLCEMNLYPCAYSMTFNVSGNTLNGILNQRSQDMLTANSWNV 200

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
             Y++L  MLA V G + GE +H + D H+Y+ H    +  L R P   P + ++ +I +
Sbjct: 201 CQYAVLLHMLAQVSGLKPGELVHVIADAHIYDRHIPMVEELLKREPYPGPTLSMDTSIQN 260

Query: 239 LLSFRYEDFTLRSYEPH---AAILAKVSV 264
              F  + F L  Y+ H     I   V++
Sbjct: 261 FYQFTTDSFRLEHYQYHTFSGKI--PVAI 287


>gi|291522853|emb|CBK81146.1| thymidylate synthase [Coprococcus catus GD/7]
          Length = 282

 Score =  244 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 85/278 (30%), Positives = 133/278 (47%), Gaps = 20/278 (7%)

Query: 4   YLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++++ R ++  G             D +   T   FG   R+DLSK FP LT +K   KS
Sbjct: 8   FINMCRDILDNGCSTEGEKVRPKWEDGSYAYTMKKFGVVNRYDLSKEFPALTLRKTAIKS 67

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
              E+LW  +   +N+  L     ++WDEWAD++G +G  YG Q      Y   ++DQ+ 
Sbjct: 68  ATDEMLWIWQRKSNNIHDL---NSTVWDEWADENGSIGKAYGYQMGVKHQYKEGMMDQVD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRS 167
            ++  L+ +PYSRR + + +    + +M L PC     F V      D   L+  L QRS
Sbjct: 125 RVIYDLKNNPYSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTKKPGDDKLVLNAILNQRS 184

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DV     +N+  YS+L  MLA V   Q GE +H + D H+Y+ H    +  +SR     
Sbjct: 185 QDVLAANNWNVVQYSVLMHMLAQVCDMQVGELVHVIADAHIYDRHIPLIEELISRETHPA 244

Query: 228 PQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           P   +NP+I +   F  +D T+ +Y     I    ++V
Sbjct: 245 PIFKLNPDIKNFYDFTTKDITIENYVTGPQIKNIPIAV 282


>gi|319645688|ref|ZP_07999919.1| thymidylate synthase [Bacillus sp. BT1B_CT2]
 gi|317392235|gb|EFV73031.1| thymidylate synthase [Bacillus sp. BT1B_CT2]
          Length = 283

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 85/267 (31%), Positives = 134/267 (50%), Gaps = 11/267 (4%)

Query: 8   LRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
           L  ++  G   +         D T   T   FG    +DL K FP+ T +   +KS + E
Sbjct: 16  LYKILSEGKSDKGQKIRPKWSDDTPAYTLKCFGVLNEYDLQKEFPIATLRPTAFKSGLKE 75

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           +LW  +  SN   L    +GV  W  WA++DG LG  YG Q +    Y     +QI  ++
Sbjct: 76  ILWIYQDKSNDVQLLEEKYGVKYWRSWANEDGNLGLAYGRQMQYKHKYKEGYFNQIDRLI 135

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
             L+ +PYSRR I + +N   +  M L PC  L  +      L+  L QRS D  +    
Sbjct: 136 WDLKNNPYSRRIITNLYNHQDLHGMTLYPCAFLTMWDYGGEFLNMTLVQRSSDYLVAGNI 195

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNI 236
           N+  Y+LL  M+A V G++ G+F H + ++H+Y+ H EQA   ++R   T P+++I+ +I
Sbjct: 196 NVTQYALLQHMIAQVCGYKPGKFHHYINNLHIYDRHIEQAKEIINRESLTAPKLVIDNSI 255

Query: 237 VDLLSFRYEDFTLRSYEPHAAILAKVS 263
            +   ++ E F L  Y PH+ I  +V+
Sbjct: 256 KNFYDYKPEHFILEGYRPHSQIKLEVA 282


>gi|225019180|ref|ZP_03708372.1| hypothetical protein CLOSTMETH_03132 [Clostridium methylpentosum
           DSM 5476]
 gi|224948032|gb|EEG29241.1| hypothetical protein CLOSTMETH_03132 [Clostridium methylpentosum
           DSM 5476]
          Length = 276

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 12/267 (4%)

Query: 8   LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
            R ++  G+            D     T+  FG   R+DLS+ FPLLT +K++ ++ + E
Sbjct: 12  CRSILNDGTWDTEYNVRPRWEDGQPAHTKKQFGIVNRYDLSREFPLLTLRKINTRAAIDE 71

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
           +LW  +  SN   +      IWD WAD+ G +G  YG Q     +Y   + DQ+  ++  
Sbjct: 72  ILWIWQKKSN--NVQDLNSKIWDSWADESGSIGKAYGYQMAVKHEYSDGMFDQVDRVLHD 129

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           L+ +P SRR + + +    + +M L PC     F V   KL+  L QRS D+ +   +NI
Sbjct: 130 LKNNPNSRRMLTNIYVHQDLHEMNLYPCAYSVTFNVSGNKLNAILNQRSQDMLVANGWNI 189

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
             Y+ L  M A V G   GE +H + D H+Y+ H    +  + + P   P++ IN  + D
Sbjct: 190 CQYAALIHMFAQVSGLVAGELVHVIADAHIYDRHIPIIEKLIEQQPFPAPRLEINEEVTD 249

Query: 239 LLSFRYEDFTLRSYEPHAAI-LAKVSV 264
              F  +DF    Y+ H      +V+V
Sbjct: 250 FYRFTPDDFAFPDYQYHPFNQKIEVAV 276


>gi|642840|gb|AAA62156.1| thymidylate synthase [Bacillus phage beta22]
          Length = 292

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 26/286 (9%)

Query: 4   YLDLLRHVIKFGSDRRD---------RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           Y ++++ ++  G   +D          T   T+S    QM+FD  +  P+LT K+V WK+
Sbjct: 8   YSNVVKEILDHGIWDKDQDVRTKWADGTPAYTKSVISTQMKFDNKE-VPILTQKRVAWKT 66

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDG----ELGPIYGVQWRS--------- 100
            + E+L F +  +    Y H+H + IWDEW  KDG     +GP YG Q            
Sbjct: 67  AIKEILAFWKDKEYRFDYFHKHNIHIWDEWEIKDGKWKGTIGPSYGYQMGKLVRKGELLD 126

Query: 101 --WPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK 158
               +    ++DQ+  ++  L  +P SRRHI S WN+  +D+MAL PC    Q+ V  G 
Sbjct: 127 IVHGEPTYKMLDQVDYLLDQLNTNPSSRRHITSLWNIHDLDEMALNPCVWNTQWLVKEGS 186

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           L   +   S D+ LG PFN+  Y +L  M+A V G++ G     + D H+Y  H E  + 
Sbjct: 187 LHLIVGVPSNDMGLGNPFNVFQYYVLQRMIAQVTGYEIGTLTFNINDAHIYERHIEPLEK 246

Query: 219 QLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Q+S      P + INP I +   F  +DF L  YE    I  +V++
Sbjct: 247 QISLPSYPAPILRINPEIKNFYDFTIDDFDLVGYEHGPTISMEVAI 292


>gi|295698569|ref|YP_003603224.1| thymidylate synthase [Candidatus Riesia pediculicola USDA]
 gi|291157314|gb|ADD79759.1| thymidylate synthase [Candidatus Riesia pediculicola USDA]
          Length = 283

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 87/283 (30%), Positives = 142/283 (50%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QY+DL R +I  G   + +RT     +     + +D+    FPL+TT+K+ +KS + E
Sbjct: 1   MKQYIDLCRKIIHEGCWIKNNRTKTRCLTIINADLEYDVENNQFPLITTRKISYKSAISE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDG------------ELGPIYGVQWRSWPDYDG 106
           ++  +RG  +       G ++W+  A+++             +LG IYGVQ RSW  +DG
Sbjct: 61  MIGHIRGYRSAKQFRDLGCNVWEANANQNKSWLSNPYRKGRDDLGRIYGVQGRSWKKHDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
           + +DQ+  ++Q L+     R  I++ +N   I+   L PC     F + + KL    YQR
Sbjct: 121 SHLDQLRKVIQHLKDGIDDRAEIITFYNPGEIEMGCLIPCMHTHTFSILDKKLYLTSYQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ FN     +L  ++A +  ++ G+  H + + H+Y N      D+QL RSP 
Sbjct: 181 SCDVPLGLSFNQIQCFILLALVAQITNYKPGKVYHKIVNAHIYENQLSLMRDVQLKRSPY 240

Query: 226 TLPQMIINPNIVDLLSFR----YEDFTLRSYEPHAAILAKVSV 264
            L ++IINP I  L         +DF + +Y  H  I    +V
Sbjct: 241 PLSKLIINPKIKKLEDIENWVSSDDFKVINYRFHGKISYPFNV 283


>gi|266624663|ref|ZP_06117598.1| thymidylate synthase [Clostridium hathewayi DSM 13479]
 gi|288863469|gb|EFC95767.1| thymidylate synthase [Clostridium hathewayi DSM 13479]
          Length = 276

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 87/267 (32%), Positives = 128/267 (47%), Gaps = 12/267 (4%)

Query: 8   LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
            R ++  G             D T   T   FG   R+DLSK FP+LT ++  +KS + E
Sbjct: 12  CREILSDGVWDTDSLVRPVWEDGTPAHTIKKFGIINRYDLSKEFPILTLRRTAFKSAIDE 71

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
           LLW  +  SN   +H     IWD WAD+ G +G  YG Q      Y     DQ+  ++  
Sbjct: 72  LLWIWQKKSN--NIHDLNSHIWDSWADETGSIGKAYGYQLGIRYQYKEGEFDQVDRVLFD 129

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           L+ +P SRR + + +N   + +M L PC     F V    L+  L QRS D+     +N+
Sbjct: 130 LKHNPLSRRIMTNLYNHQDLHEMNLYPCAYSMTFNVSGNVLNGILNQRSQDMLTANNWNV 189

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
             Y++L  M ASV G Q GE +H + D H+Y+ H       + ++P   P+ I+ P I D
Sbjct: 190 TQYAVLLHMFASVSGLQAGELVHVIADAHIYDRHVPIVKEMIEKTPYDAPKFIMGPEIHD 249

Query: 239 LLSFRYEDFTLRSYEPHA-AILAKVSV 264
             SF  + F L  Y+ HA      V++
Sbjct: 250 FYSFTKDSFRLEDYQYHAFTDKIPVAI 276


>gi|154272075|ref|XP_001536890.1| thymidylate synthase [Ajellomyces capsulatus NAm1]
 gi|150408877|gb|EDN04333.1| thymidylate synthase [Ajellomyces capsulatus NAm1]
          Length = 315

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 113/262 (43%), Positives = 142/262 (54%), Gaps = 57/262 (21%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46
           HQYL L+R +++ G  R DRTG GT S F   Q+RF LSK                PLLT
Sbjct: 47  HQYLRLIRSILETGEHRPDRTGTGTCSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+Y
Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166

Query: 95  GVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           G QWR +         DY G  +DQI+ +V+ L+ +PY RR I+SAWN A + KMALPPC
Sbjct: 167 GFQWRHFGAEYIDAQTDYTGQGVDQIAEVVRKLKENPYDRRIILSAWNPADLKKMALPPC 226

Query: 147 HCLFQFYV----------------------DNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           H   QFYV                        G LSCQLYQRS D+ LG+PFNIASY+LL
Sbjct: 227 HMFAQFYVSFPAGDRDDGGEENEDQNEKEKRKGTLSCQLYQRSCDMGLGVPFNIASYALL 286

Query: 185 TMMLASVIGFQYGEFIHTLGDV 206
           T MLA       G  IHT+GD 
Sbjct: 287 THMLAHAADLHPGTLIHTMGDA 308


>gi|238923626|ref|YP_002937142.1| thymidylate synthase [Eubacterium rectale ATCC 33656]
 gi|238875301|gb|ACR75008.1| thymidylate synthase [Eubacterium rectale ATCC 33656]
 gi|291525685|emb|CBK91272.1| thymidylate synthase [Eubacterium rectale DSM 17629]
 gi|291528190|emb|CBK93776.1| thymidylate synthase [Eubacterium rectale M104/1]
          Length = 282

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 83/274 (30%), Positives = 128/274 (46%), Gaps = 18/274 (6%)

Query: 7   LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
           + + +++ G+            D T   T   FG   R+DLSK FP +T +K + KS   
Sbjct: 11  MCQDILENGTSTEGELVRPHWEDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTYIKSATD 70

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           ELLW  +  SN   +H     +WDEWAD+DG +G  YG Q      Y   ++DQ+  ++ 
Sbjct: 71  ELLWIWQKKSN--NIHDLKSHVWDEWADEDGSIGKAYGYQLGVKHQYKEGMMDQVDRVIY 128

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGDVF 171
            L+  P+SRR + + +    + +M L PC     F V   K      L+  L QRS DV 
Sbjct: 129 DLKHTPFSRRILTNIYVHQDLHEMNLYPCAYSMTFNVTQKKGDDRLTLNGILNQRSQDVL 188

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
               +N+  Y++L  MLA V   + GE +H + D H+Y+ H       + R     P+  
Sbjct: 189 AANNWNVCQYAVLMHMLAQVCDMRVGELVHVIADAHIYDRHVPIVKELIERPQYDAPKFW 248

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           +NP+I D   F  +D  +  Y     I    ++V
Sbjct: 249 LNPDIKDFYQFTTDDIKITDYVTGEQIKDIPIAV 282


>gi|33152142|ref|NP_873495.1| thymidylate synthase [Haemophilus ducreyi 35000HP]
 gi|38372558|sp|Q7VMH2|TYSY_HAEDU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|33148364|gb|AAP95884.1| thymidylate synthase [Haemophilus ducreyi 35000HP]
          Length = 283

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 19/283 (6%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL   ++  G   +  RT     +     + +D++KG FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLDLCHRILNEGKWVKNKRTDKLCLTVINADLTYDVAKGEFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL ++RG  N +   + G   WD  A+++             ++G +YG   R +P  D 
Sbjct: 61  LLGYIRGYDNAADFRQLGTKSWDANANQNADWLANPYRKGVDDMGLVYGAIGRKFPKADH 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +D +  IV  L     +R  I + ++        L PC     F + +G L     QR
Sbjct: 121 GSLDLLKQIVDDLSNGIDNRGEIYTFYHPGAFHMGCLRPCLYSHHFSLLDGTLYLNSTQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPR 225
           S DV LG+ +N+        ++A +   + G+  H + + H+Y +      D+QL R P 
Sbjct: 181 SADVPLGLNWNMVQCYTFLALMAQITNHKAGQVFHKIVNAHIYEDQLALMRDVQLKREPF 240

Query: 226 TLPQMIINPNIVDLLSFRY----EDFTLRSYEPHAAILAKVSV 264
             P + INP I  L         +DF + +Y  H +I    S+
Sbjct: 241 ATPTLTINPAIKSLEDLEIWVTLDDFKVENYFYHPSIQYPFSI 283


>gi|311992725|ref|YP_004009593.1| Td thymidylate synthase [Acinetobacter phage Ac42]
 gi|298684508|gb|ADI96469.1| Td thymidylate synthase [Acinetobacter phage Ac42]
          Length = 291

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 89/286 (31%), Positives = 137/286 (47%), Gaps = 23/286 (8%)

Query: 1   MHQYLDLLRHVIKFG-SDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M  Y + LR ++  G     DRTGVGT + FG   ++D+S+  P+LT +KV WKS+V E+
Sbjct: 7   MRDYDNALRDILDTGFHIDGDRTGVGTIAKFGVNTKYDISERVPVLTKRKVAWKSIVKEV 66

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD---------GELGPIYGVQWRSWP----DYDG 106
           LW++ G SN++ L   G  IW  W  K+         G  G +YG     +     D + 
Sbjct: 67  LWYISGSSNINDLEDMGAKIWTPWKSKEFETKHGLPEGSAGYVYGFNLIHFGADVKDTNP 126

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LS 160
              +Q+  ++ +LRA+P SR+   + W     ++  LP CH  + F V   K      L+
Sbjct: 127 KGFNQLDYVINTLRANPKSRQACFTFWRPDTNNQAILPACHAFYSFIVSPDKNGEMNVLN 186

Query: 161 CQLYQRSGDVFLGIPF-NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
           C L+QRS D  +G+   NI + +L T M+A  +G   G   H+    H+Y N  +     
Sbjct: 187 CHLFQRSADYPIGVGMGNILTATLFTYMIAQQLGMTPGHVYHSGAHCHVYKNAIDATVEY 246

Query: 220 LSRSPRT-LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R      P + +N     +  +  EDF L  Y P   I   ++V
Sbjct: 247 LEREDEPDSPILKLN-KRDSIYDYVPEDFELIDYNPLPPIKFNIAV 291


>gi|119622122|gb|EAX01717.1| thymidylate synthetase, isoform CRA_b [Homo sapiens]
          Length = 165

 Score =  242 bits (618), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 80/162 (49%), Positives = 109/162 (67%)

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  MALPPCH L QFYV N +LSCQ
Sbjct: 4   DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQ 63

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A + G + G+FIHTLGD H+Y NH E   +QL R
Sbjct: 64  LYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQR 123

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PR  P++ I   +  +  F+ EDF +  Y PH  I  +++V
Sbjct: 124 EPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 165


>gi|34419266|ref|NP_899279.1| dTMP (thymidylate) synthase [Vibrio phage KVP40]
 gi|34332947|gb|AAQ64102.1| dTMP (thymidylate) synthase [Vibrio phage KVP40]
          Length = 300

 Score =  242 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 115/300 (38%), Positives = 159/300 (53%), Gaps = 38/300 (12%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M  YL L   ++  G    +RTG  T S    ++R+DLSKGFPLLTTKK+  K++  ELL
Sbjct: 2   MKNYLQLCTEILNEGDFLENRTGTNTVSVISRELRWDLSKGFPLLTTKKMATKAIFGELL 61

Query: 61  WFLRGDSNVSYLHRH------GVSIWDEWADK-------------DGELGPIYGVQWRSW 101
           WFL G   +S L ++         IW +  D+             + +LG +YG  WR  
Sbjct: 62  WFLSGSGLISDLRKYTELSDEDFCIWQQNLDELNERAKKAGIVRNEDDLGYVYGKVWRKR 121

Query: 102 ----PDYDGNVIDQISSIVQSL---RADPYS---RRHIVSAWNV-----ALIDKMALPPC 146
                D +    DQI  ++  +   + DP     RR IV AW+      +    +ALPPC
Sbjct: 122 LSVTADKEVTEFDQIHQLLCDIAAVKEDPTQSAQRRMIVEAWDPYFHTESNSVDVALPPC 181

Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206
           H  FQ +V NGK+S +  QRS D FLG+PFNIASY+LL  +LA + G + GE I + GDV
Sbjct: 182 HYGFQVFVRNGKISLKWNQRSVDTFLGLPFNIASYALLVHILAQLTGLKVGELIFSGGDV 241

Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKVS 263
           H+Y +H  Q   QL R+PR LPQ+ + P    L      R  DF +  Y+P+ A+  K+S
Sbjct: 242 HIYEDHIVQVLKQLRRTPRELPQIQL-PEFDTLSQLLTKRASDFVVYDYDPYPALKGKMS 300


>gi|139436967|ref|ZP_01771127.1| Hypothetical protein COLAER_00100 [Collinsella aerofaciens ATCC
           25986]
 gi|133776614|gb|EBA40434.1| Hypothetical protein COLAER_00100 [Collinsella aerofaciens ATCC
           25986]
          Length = 282

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 18/279 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
            Q++ + R ++  G+            D T   T   FG   R+DL + FP LT ++   
Sbjct: 6   QQFVAMCRDILDHGTTTEGQKVRPVWEDGTPAYTIKNFGVTARYDLREEFPALTLRRTAL 65

Query: 53  KSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           KS + E+LW  +  SN   +H     IWDEWAD+ G +G  YG Q      Y     DQ+
Sbjct: 66  KSAMDEILWIYQKKSN--NVHDLNSHIWDEWADETGSIGKAYGYQIGQKSHYAEGDFDQM 123

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQR 166
             ++  L+  PYSRR + + +  + + +M L PC     + V      D   L+  L QR
Sbjct: 124 DRVLYDLKHTPYSRRIMTNTYVFSDLSEMHLYPCAYSVTYNVTQRPQDDKPTLNMILNQR 183

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S D+     +N+  Y++L MM+A  +    GE +H + D H+Y+ H +     + R    
Sbjct: 184 SQDILAANNWNVCQYAILLMMVAQSVDMIPGELLHVIADAHIYDRHVDIVRELIERPQFA 243

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P++ +NP++ D  +F  +D  +  YE    +    ++V
Sbjct: 244 APKVTLNPDVHDFYAFTTDDLIVEGYEHGPQVKNIPIAV 282


>gi|255994719|ref|ZP_05427854.1| thymidylate synthase [Eubacterium saphenum ATCC 49989]
 gi|255993432|gb|EEU03521.1| thymidylate synthase [Eubacterium saphenum ATCC 49989]
          Length = 276

 Score =  241 bits (615), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 14/270 (5%)

Query: 6   DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           ++   ++  G   +         D T   T   FG    +DLS+ FP LT +    K  V
Sbjct: 10  NMCSKILSQGYSSKGQKVRAKWSDGTPAHTIKMFGIVNEYDLSEEFPALTLRPTAIKLAV 69

Query: 57  HELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
            ELLW  +   +N+  L     SIWDEWAD++G +G  YG Q      +    +DQ+ ++
Sbjct: 70  DELLWIWQRKSNNIKDL---NSSIWDEWADENGSIGKAYGYQMAKKYKFAQGEMDQVDNV 126

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
           +  L+ +PYSRR + + +N + I +M L PC     F V   KL+  L QRS D+     
Sbjct: 127 IWQLKNNPYSRRILTNIYNFSDISEMNLEPCAYSMTFNVTGDKLNGILNQRSQDILAANN 186

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           +N+  YS+L  +L+ V GF+ G+ +H + D H+Y+ H    +  +SR     P+  I+  
Sbjct: 187 WNVVQYSVLLHLLSKVCGFKPGKLVHVIADAHIYDRHIPMIEDLISRKSYDAPKFSIDDG 246

Query: 236 IVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           + D   F  +D  + +Y+    I    +++
Sbjct: 247 VDDFYKFSMDDIKVENYKAGPQITDIPIAI 276


>gi|229829347|ref|ZP_04455416.1| hypothetical protein GCWU000342_01434 [Shuttleworthia satelles DSM
           14600]
 gi|229792510|gb|EEP28624.1| hypothetical protein GCWU000342_01434 [Shuttleworthia satelles DSM
           14600]
          Length = 288

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 91/281 (32%), Positives = 134/281 (47%), Gaps = 24/281 (8%)

Query: 6   DLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           D+   +I  G+            D T   T   FG   R+DLS+ FP +T ++   KS V
Sbjct: 10  DMCEEIINRGTGSQGMEVRPRWEDGTPAHTIKRFGVVNRYDLSREFPAITLRRTAIKSCV 69

Query: 57  HELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR----SWPDYDGN--VID 110
           +E+LW  +  SN   +     S+WDEWAD++G +G  YG Q         D DG+   +D
Sbjct: 70  NEMLWIWQKKSN--NIRDLKSSVWDEWADEEGSIGKAYGYQIGKKYLHHTDADGSPVYMD 127

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG------KLSCQLY 164
           QI +++  LR +P+SRR IV+ +N   + +M L PC     F V          L+  L 
Sbjct: 128 QIDAVLYDLRHNPFSRRIIVNMYNFDDLHEMHLYPCAYSMTFNVTKNPKSGRMVLNAILN 187

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
           QRS DV     +N+  Y++L  MLA V   + GE +H + D H+Y+ H       +SR  
Sbjct: 188 QRSQDVLAANNWNVCQYAVLLHMLAQVCHMEAGELVHVIADAHIYDRHIPLVQELISREQ 247

Query: 225 RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
              P+  +NP I D   F  ED  L  Y+    I    ++V
Sbjct: 248 FPAPKFWLNPEIHDFYQFTEEDIRLDDYQYGPQIKNIPIAV 288


>gi|219123048|ref|XP_002181844.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406445|gb|EEC46384.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 217

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 105/213 (49%), Positives = 132/213 (61%), Gaps = 23/213 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYLDL RH++  G  R DRTG GT S FG QMRF L  G  PLLTTK+V W+ V  ELL
Sbjct: 5   RQYLDLCRHILDHGVHRGDRTGTGTLSQFGTQMRFSLRDGTLPLLTTKRVFWRGVAEELL 64

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP------ 102
           WF+ G++N + L    + IWD     D            G+LGP+YG QWR +       
Sbjct: 65  WFVAGNTNANDLAAKDIRIWDGNGSPDFLDSWGLGHREVGDLGPVYGFQWRHFGATYGTI 124

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK-- 158
             DY G  +DQ++  +  ++ +P  RR I+SAWN A ++ MALPPCH   QFYVD  K  
Sbjct: 125 HDDYTGKGVDQLAECIDKIKNNPEDRRIILSAWNPADLELMALPPCHMFRQFYVDTEKNE 184

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
           LSCQ+YQRS D+ LG+PFNIASY+LLT M+A V
Sbjct: 185 LSCQMYQRSADMGLGVPFNIASYALLTHMIAHV 217


>gi|330891851|gb|EGH24512.1| thymidylate synthase [Pseudomonas syringae pv. mori str. 301020]
          Length = 298

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 97/287 (33%), Positives = 152/287 (52%), Gaps = 48/287 (16%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
            A +D+MALPPCH L+Q + +    ++S  LY RS D+ LG PFN+   + L  ++  + 
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT 240

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDL 239
           G+    F + +GD H+Y NH +  + Q++R P  +P+++I+  + + 
Sbjct: 241 GYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLVISDRVPEF 287


>gi|284164961|ref|YP_003403240.1| thymidylate synthase [Haloterrigena turkmenica DSM 5511]
 gi|284014616|gb|ADB60567.1| thymidylate synthase [Haloterrigena turkmenica DSM 5511]
          Length = 338

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 153/340 (45%), Gaps = 80/340 (23%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYL+L+  V+  G+ + +RTGV T S+F      DL  G+PLLTTK++    W S++H
Sbjct: 1   MRQYLELVDTVLSEGTYKPNRTGVDTISSFSEHYEVDLQDGYPLLTTKQMDGYRWNSMLH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR--------------SWPD 103
           E+ W+L G+ ++  L      IWD WAD +G L   YG  WR              SWPD
Sbjct: 61  EVCWYLSGEEHIRDLREE-TKIWDAWADDEGRLDTAYGRFWRRFPIPEDDAQLEGESWPD 119

Query: 104 YDGN----------VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
                           DQ+  ++ +L   P SRR +V+AW+ A      LPPCH  F F 
Sbjct: 120 ETHQWVTEEADGRRTFDQLQYVIDTLSDSPNSRRLVVNAWHPANAAVSTLPPCHYSFVFN 179

Query: 154 VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY---- 209
               +L+C L QRSGD  LGIPFNIA+Y+LLT ++A   GF+ G F HT+ D H+Y    
Sbjct: 180 AQGDRLNCHLTQRSGDTALGIPFNIAAYALLTKVIAQQTGFKPGTFAHTVVDTHVYCGRG 239

Query: 210 ----------------------------------------------NNHFEQADLQLSRS 223
                                                          +H      QLSR 
Sbjct: 240 DRGEWYADNLETLQSRLNDVEDREDYLEVKSWLESAAPDEAEGDERLDHVPGLLEQLSRE 299

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           P   P + +    V +    YED  L++YE H  I   V+
Sbjct: 300 PLERPTLEVAD--VSIDELAYEDVELKNYESHEGIEFAVA 337


>gi|229815429|ref|ZP_04445761.1| hypothetical protein COLINT_02477 [Collinsella intestinalis DSM
           13280]
 gi|229808962|gb|EEP44732.1| hypothetical protein COLINT_02477 [Collinsella intestinalis DSM
           13280]
          Length = 282

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 18/274 (6%)

Query: 7   LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
           + R ++  G+            D T   T   FG   R+DL + FP LT ++   KS + 
Sbjct: 11  MCRDILDHGTTTEGEKVRPVWEDGTPAYTIKNFGVTNRYDLREEFPALTLRRTALKSAMD 70

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E+LW  +  SN   ++     IWD+WAD+ G +G  YG Q      Y     DQ+  ++ 
Sbjct: 71  EILWIYQKKSN--NINDLNSHIWDQWADETGSIGKAYGYQIAQKSHYKEGDFDQMDRVLY 128

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVF 171
            L   PYSRR + + +  + + +M L PC     + V      D   L+  L QRS D+ 
Sbjct: 129 DLTHTPYSRRIMTNMYTFSDLSEMHLYPCAYSVTYNVTSEPGCDKPVLNMVLMQRSQDIL 188

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
               +N+  Y++L MM+A       GE +H + D H+Y+ H       + R     P++ 
Sbjct: 189 AANNWNVCQYAILLMMVARHCDMIAGELLHVIVDAHIYDRHVNIVRELIERPQYPAPKVS 248

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           +NP + +   F  ED  +  Y     +    ++V
Sbjct: 249 LNPEVTNFYDFTTEDLIVEDYNHGPQVKNIPIAV 282


>gi|325275840|ref|ZP_08141701.1| thymidylate synthase [Pseudomonas sp. TJI-51]
 gi|324099024|gb|EGB97009.1| thymidylate synthase [Pseudomonas sp. TJI-51]
          Length = 306

 Score =  239 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 100/306 (32%), Positives = 146/306 (47%), Gaps = 59/306 (19%)

Query: 18  RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGV 77
           + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++ FLRG  N       G 
Sbjct: 1   QGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMVGFLRGVKNAGEFRELGC 60

Query: 78  SIWDEWADK------------DGELGPIYGVQWRSWPDYD-------------------- 105
            +WD+ A++              +LG IYGVQWR WP Y                     
Sbjct: 61  KVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIPLGNPAAIAMAEQAGFRR 120

Query: 106 --------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
                            IDQ+   + ++  DP SRR +   WN A +D+MALPPCH L+Q
Sbjct: 121 IAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWNCAQLDEMALPPCHLLYQ 180

Query: 152 FY--VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           F+  V+  ++S  LY RS D+ LG PFN+   + L  +   + G+    F + +GD H+Y
Sbjct: 181 FHPNVETREISLTLYIRSNDLGLGTPFNLTEGAALLALFGRLTGYTPRWFTYFIGDAHVY 240

Query: 210 NNHFEQADLQLSRSPRTLPQMIINP-----------NIVDLLSFRYEDFTLRSYEPHAAI 258
            NH +  + QL R P   P+++I+                L      DF L  YE HA +
Sbjct: 241 ENHLDMLNEQLKREPLEAPKLVISDRVPAFAETGKYEPEWLEKIEPSDFWLEGYEHHAPM 300

Query: 259 LAKVSV 264
            A ++V
Sbjct: 301 TAPMAV 306


>gi|310831492|ref|YP_003970135.1| putative bifunctional dihydrofolate reductase/thymidylate synthase
           [Cafeteria roenbergensis virus BV-PW1]
 gi|309386676|gb|ADO67536.1| putative bifunctional dihydrofolate reductase/thymidylate synthase
           [Cafeteria roenbergensis virus BV-PW1]
          Length = 452

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 103/284 (36%), Positives = 153/284 (53%), Gaps = 26/284 (9%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           +YL LL  ++  G  R+ R    T S F   + FD+  GFPLLTTKK+ WK +V ELL+F
Sbjct: 169 KYLHLLSKILNEGEFRQTRN-ANTWSLFNQNLEFDMKDGFPLLTTKKMFWKGIVEELLFF 227

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD-----------GELGPIYGVQWRSWP--------D 103
           +RG +N   L   GV+IW     KD           G++G IYG  WR +         +
Sbjct: 228 IRGHTNSKLLEEKGVNIWKGNTSKDFITKLGLPYEEGDMGKIYGFNWRHFGADYINCNTN 287

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF-QFYVDNG-KLSC 161
           Y G   DQ+  I++ ++ +P SRR ++S ++ A   +  L PCH L  QFYV +   L  
Sbjct: 288 YTGKGFDQLVKIIEEIKTNPSSRRILMSDFDPATSHQGVLYPCHSLVLQFYVRDEDILDV 347

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           ++YQRS D FLG+PFNI+S SLL  +++ +     G+   +LGD H+Y  H +Q   QL 
Sbjct: 348 KMYQRSVDSFLGLPFNISSTSLLLHIISKLTNKTPGKVSLSLGDCHIYETHRDQVIRQLK 407

Query: 222 RSPRTLPQMIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKV 262
           R P   P++I+ P+   L        E++ + +Y  H  I A++
Sbjct: 408 RLPYNFPKLIL-PDFTSLDQVENSTLENYVIENYLHHKGIKAEM 450


>gi|4103865|gb|AAD01867.1| thymidylate synthase [Enterococcus faecalis]
          Length = 153

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 82/153 (53%), Positives = 110/153 (71%)

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           ++++++ ++ +P SRR IVSAWN   +  MALPPCH +FQFYV+ GKLSCQLYQRS DVF
Sbjct: 1   LANVIEMIKTNPDSRRLIVSAWNPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVF 60

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+PFNIASY+LLT ++A   G + GEF+HTLGD HLY NH EQ   QLSR  R+ P ++
Sbjct: 61  LGVPFNIASYALLTHLIAHETGLEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLV 120

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +NP+   +  F  ED  +  Y+PH  I A ++V
Sbjct: 121 LNPDKASVFDFDMEDIKVEGYDPHPTIKAPIAV 153


>gi|313126201|ref|YP_004036471.1| thymidylate synthase [Halogeometricum borinquense DSM 11551]
 gi|312292566|gb|ADQ67026.1| thymidylate synthase [Halogeometricum borinquense DSM 11551]
          Length = 332

 Score =  238 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 111/336 (33%), Positives = 151/336 (44%), Gaps = 78/336 (23%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYLDL+  V+  G  + +RTGV T S F      DL +GFPLLTTK +    W S++H
Sbjct: 1   MRQYLDLVTDVLSNGQHKPNRTGVDTISAFSRHYEVDLQEGFPLLTTKDLSGFRWNSLIH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102
           E +W+L G+ ++  L      IWD WAD++G L   YG  WR +P               
Sbjct: 61  EFVWYLSGEEHIRTLREE-TGIWDAWADEEGRLDTAYGRFWRRFPVPDEGLPGEAWPEDT 119

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159
                D    DQI  ++ +LR +P SRR +V+AW+ A      LPPCH  F F V   KL
Sbjct: 120 HRWMNDEGTFDQIQYVLDTLRENPNSRRMVVNAWHPANAAVSTLPPCHYSFVFNVQGDKL 179

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN--------- 210
           +  L QRSGD+ LGIPFNIA+Y+LL   +A   GF+ G+F HT+ D H+Y          
Sbjct: 180 NLHLTQRSGDIALGIPFNIAAYALLATAVAQRTGFEVGKFAHTVVDAHVYCGEGDRGAWY 239

Query: 211 -----------------------------------------NHFEQADLQLSRSPRTLPQ 229
                                                    +H      Q +R P   P 
Sbjct: 240 GDHLSDLQTRLADVSSRDEYLDVRDWLVEAAPAEAEGKERYDHVPGLLKQCAREPGDRPT 299

Query: 230 MIINPNIVD--LLSFRYEDFTLRSYEPHAAILAKVS 263
           +    ++ D  L    Y+D  L  Y+P   I   V+
Sbjct: 300 I----DVADVPLDELTYDDIELHDYDPDEGIRFAVA 331


>gi|221194598|ref|ZP_03567655.1| thymidylate synthase [Atopobium rimae ATCC 49626]
 gi|221185502|gb|EEE17892.1| thymidylate synthase [Atopobium rimae ATCC 49626]
          Length = 282

 Score =  238 bits (607), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 80/274 (29%), Positives = 130/274 (47%), Gaps = 18/274 (6%)

Query: 7   LLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
           +   +I+ G+            D T   T   FG   R+DL + FP LT ++   KS + 
Sbjct: 11  MCSDIIEHGTTTVGEKVRPHWEDGTPAYTIKKFGVCNRYDLREEFPALTLRRTALKSAMD 70

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E+LW  +  SN   +H     IWD WAD+ G +G  YG Q      Y     DQ+  ++ 
Sbjct: 71  EVLWIYQKKSN--NVHDLNSHIWDAWADESGSIGKAYGYQVGQKSHYAEGDFDQMDRVLY 128

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVF 171
            L+ +P+SRR + + +  A + +M L PC     + V          L+  L QRS D+ 
Sbjct: 129 DLQNNPFSRRIMTNLYTFADLSEMNLYPCAFNAIYNVTQNPGDAKPTLNLLLVQRSQDIL 188

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
               +N+  Y++L MM+A V G Q GE +H + D H+Y+ H +     +SR     P + 
Sbjct: 189 AANNWNVCQYAILLMMVAQVSGMQAGELVHMISDAHIYDRHVDIVRELISRPIFAAPHVS 248

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           +NP++ D  +F  +D  + +YE    +    ++V
Sbjct: 249 LNPDVTDFYAFTTDDLIVENYEHGPQVKNIPIAV 282


>gi|210633178|ref|ZP_03297714.1| hypothetical protein COLSTE_01627 [Collinsella stercoris DSM 13279]
 gi|210159218|gb|EEA90189.1| hypothetical protein COLSTE_01627 [Collinsella stercoris DSM 13279]
          Length = 282

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 18/274 (6%)

Query: 7   LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
           + R ++  G+            D T   T   FG   R+DL + FP LT ++   KS + 
Sbjct: 11  MCRDILDHGTTTEGEKVRPRWEDGTPAYTIKNFGITNRYDLREEFPALTLRRTALKSAMD 70

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E+LW  +  SN   ++     IWD+WAD+ G +G  YG Q      Y     DQ+  ++ 
Sbjct: 71  EILWIYQKKSN--NINDLNSHIWDQWADETGSIGKAYGYQIAQKSHYREGDFDQMDRVLY 128

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVF 171
            L   PYSRR + + +  + + +M L PC     + V      D   L+  L QRS D+ 
Sbjct: 129 DLTHTPYSRRIMTNMYTFSDLSEMHLYPCAYSVTYNVTSEPGCDKPVLNMVLMQRSQDIL 188

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
               +N+  Y++L MM+A       GE +H + D H+Y+ H +     + R     P++ 
Sbjct: 189 AANNWNVCQYAILLMMVARHCDMIAGELLHVIVDAHIYDRHVDIVRELIERPQFPAPKVS 248

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILA-KVSV 264
           +NP + +   F  +D  +  Y     +    ++V
Sbjct: 249 LNPEVTNFYDFTTDDLIVEDYNHGPQVKGIPIAV 282


>gi|289450174|ref|YP_003475119.1| thymidylate synthase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184721|gb|ADC91146.1| thymidylate synthase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 276

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 137/267 (51%), Gaps = 12/267 (4%)

Query: 8   LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
            R++++ G             D T   T  TF    R+DLS+ FPLLT +K+++K+ + E
Sbjct: 12  CRYILEHGISTVGHTVRPHWPDGTPAHTLKTFALVNRYDLSEEFPLLTLRKINFKAALDE 71

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
           +LW  +  SN   +      IWD WA +DG +G  YG Q      Y    +DQ+  ++  
Sbjct: 72  MLWIWQRKSN--KIADLNSKIWDSWAGEDGTIGKAYGYQLGVKHHYPEGDMDQVDRVLYL 129

Query: 119 LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           LR DPYSRR I + +N A +++M L PC     F V   +L+  L QRS D+ +   +N+
Sbjct: 130 LRNDPYSRRIITNIYNHADLNEMNLYPCAYSVTFNVTGNRLNALLNQRSQDMLVANNWNV 189

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD 238
           A Y+ L +M+A + G++ GE +H + D H+Y+ H    +  + +   + P++ +  +  D
Sbjct: 190 AQYAALLLMIAKITGYEPGELVHVIADAHIYDRHIPLVEELIKQPTYSAPKVELKYSGND 249

Query: 239 LLSFRYEDFTLRSYEPHAAILA-KVSV 264
             +   +DF + +Y     +    V++
Sbjct: 250 FYAVNVDDFVVTNYHCGPLLKGIPVAI 276


>gi|289582635|ref|YP_003481101.1| thymidylate synthase [Natrialba magadii ATCC 43099]
 gi|289532188|gb|ADD06539.1| thymidylate synthase [Natrialba magadii ATCC 43099]
          Length = 342

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 156/344 (45%), Gaps = 84/344 (24%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYLDL+   +  G+ + +RTGV T S+F      DL +G+PLLTTK++    W S++H
Sbjct: 1   MQQYLDLVDAALSEGAYKPNRTGVDTISSFSEHYEVDLQEGYPLLTTKQMDGYRWNSMLH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102
           E+ W+L G+ ++  L      IWD WAD++G L   YG  WR +P               
Sbjct: 61  EVCWYLSGEEHIQDLREE-TKIWDAWADEEGHLDTAYGRFWRRFPVPEEPAQLPGESWPD 119

Query: 103 ----------DYDG---NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
                       DG      DQ+  ++ +L   P SRR +V+AW+ A      LPPCH  
Sbjct: 120 ESHQWVTAEETADGETRRTFDQLQYVIDTLSDSPNSRRLVVNAWHPANAAVSTLPPCHYS 179

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           F F V   +L+C L QRSGD+ LGIPFNIA+Y+LLT ++A   GF+ G F HT+ D H+Y
Sbjct: 180 FVFNVQGDRLNCHLTQRSGDIALGIPFNIAAYALLTKLVAKQTGFEPGTFAHTVVDAHVY 239

Query: 210 --------------------------------------------------NNHFEQADLQ 219
                                                              +H      Q
Sbjct: 240 CGRGDRGEWYADNLEALQTRLADVEERTEYREIREWLESEAPAEADGDERLDHVPGLLEQ 299

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           LSR P   P + +  +   +    YED TLR YE H  +   V+
Sbjct: 300 LSREPLERPTLEV--DAATIDDLSYEDVTLREYESHDGLTFGVA 341


>gi|260589792|ref|ZP_05855705.1| thymidylate synthase [Blautia hansenii DSM 20583]
 gi|331083219|ref|ZP_08332335.1| thymidylate synthase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260540032|gb|EEX20601.1| thymidylate synthase [Blautia hansenii DSM 20583]
 gi|330404608|gb|EGG84148.1| thymidylate synthase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 283

 Score =  235 bits (601), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 21/279 (7%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTG--VGTRSTFGYQMRFDLSKGFPLLTTKKVHWK 53
           ++ + + +++ G+D +        + TG    T   FG   R+DL K FP LT +K   K
Sbjct: 8   FIRMCQDILENGTDTQGEKVRPKWEDTGEYAYTIKRFGVVNRYDLRKEFPALTLRKTALK 67

Query: 54  SVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQI 112
           + + E+LW  +   +N+  L+     IWD WAD+DG +G  YG        Y G   DQ+
Sbjct: 68  TCMDEILWIYQRKSNNIHDLNG---HIWDAWADEDGSIGTCYGDVVGRKFLYKGEETDQM 124

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQR 166
             +++ L+ +PYSRR + + +    +   AL PC     + V   K      L+  L QR
Sbjct: 125 DYVLKQLKENPYSRRIMTNLYQFEYLHSGALDPCCYSMTYNVTKEKDSEKLVLNGVLNQR 184

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S D+     +N+  Y++L MM+A V     GE +H + D H+Y+ H       + R    
Sbjct: 185 SQDILAANNWNVCQYAILLMMVAQVNDMIPGELVHVIADAHIYDRHVPVIQELIKRETFP 244

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            P++ +NP + D   F  +D  + +Y+    I    ++V
Sbjct: 245 APKVRLNPEVKDFYQFTTDDLIVENYQAGPQIKDIPIAV 283


>gi|222480576|ref|YP_002566813.1| thymidylate synthase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453478|gb|ACM57743.1| thymidylate synthase [Halorubrum lacusprofundi ATCC 49239]
          Length = 342

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 156/344 (45%), Gaps = 84/344 (24%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYLDL+   +  G+ + +RTGV T +TF  Q   DLS+GFPLLTTKK+    W S++H
Sbjct: 1   MQQYLDLVDDTLSTGTYKPNRTGVDTIATFSGQYTVDLSEGFPLLTTKKMDGYRWNSLIH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----------- 106
           E+LW+L G+ ++  L      IWD WAD +G L   YG  WR +P  DG           
Sbjct: 61  EVLWYLSGEEHIRDLREE-TKIWDAWADDEGRLDTAYGRFWRRFPVPDGVDALPGETWPK 119

Query: 107 -----------------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
                               DQI  ++ +L  +P SRR +V+AW+ A      LPPCH  
Sbjct: 120 DAHRWVTVEEGPEGVERRTFDQIQYVLDTLDENPRSRRMVVNAWHPANAAVSTLPPCHYT 179

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           F   V +G+L+  L QRSGD+ LG+PFNIA+Y+LL   LA   GF+ GEF HT+ D H+Y
Sbjct: 180 FVVNVQDGRLNLHLTQRSGDIALGVPFNIAAYALLANALAQRTGFEIGEFGHTVVDAHIY 239

Query: 210 N--------------------------------------------------NHFEQADLQ 219
                                                              +H      Q
Sbjct: 240 CGRGDRGQWYANNLRYVQDRLATVESKADYLDVKSWVERTAPDEADGEERYDHVPGLLEQ 299

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           LSR PR  P++ I      L    YED  +  Y+    I   V+
Sbjct: 300 LSREPRERPRIEIADKP--LDELTYEDIEVVDYDSADGISFAVA 341


>gi|303232254|ref|ZP_07318953.1| thymidylate synthase [Atopobium vaginae PB189-T1-4]
 gi|302481664|gb|EFL44725.1| thymidylate synthase [Atopobium vaginae PB189-T1-4]
          Length = 282

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 18/274 (6%)

Query: 7   LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
           + +++I+ G+            D T   T   FG   R+DL + FP LT ++   KS V 
Sbjct: 11  MCQNIIEHGTSTEGQKVRPHWEDGTPAYTIKQFGVCNRYDLRQEFPALTLRRTAIKSAVD 70

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E+LW  +  SN   +H     IWD WAD+ G +G  YG Q      Y    +DQ+  ++ 
Sbjct: 71  EILWIYQKKSN--NIHDLKSHIWDSWADETGSIGKAYGYQIAQVSHYPEGDMDQMDRVLF 128

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVF 171
            L  +PYSRR I S +  + + +M L PC     + V          L+  L QRS D+ 
Sbjct: 129 DLTHNPYSRRIITSMYTFSDLSEMHLYPCAYNVIYNVTKTPNEAKPTLNMLLVQRSQDIL 188

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
               +N+  Y++L MM+A       GE +H + D H+Y+ H       +SR     PQ+ 
Sbjct: 189 AANNWNVCQYAVLLMMVAQATNMIPGELVHMIADAHIYDRHIPVVKELISRKEYPAPQVR 248

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           +NP I +   F  +D  + +YE    +    +++
Sbjct: 249 LNPAITNFYDFTPDDVIVENYEHGPQVTNIPIAI 282


>gi|161610422|gb|ABX74967.1| thymidylate synthase-like protein [Retroperitoneal
           fibromatosis-associated herpesvirus]
          Length = 170

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 84/161 (52%), Positives = 109/161 (67%)

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DY G  +DQ++ I+  ++  P  RR ++SAWN   I KMALPPCH L QFYV  G+LSCQ
Sbjct: 9   DYSGRGVDQLAYILDLIKNHPCDRRMVMSAWNPVDIPKMALPPCHVLCQFYVSAGELSCQ 68

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           LYQRSGD+ LG+PFNIASY+LLT M+A V G + GE IH LGD H+Y NH E   +QLSR
Sbjct: 69  LYQRSGDMGLGVPFNIASYALLTYMIAHVSGLKPGELIHVLGDAHIYKNHIEAVKVQLSR 128

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
            PR  P++ I   +  +  F  +DF+L  Y+PH AI   ++
Sbjct: 129 EPRPFPRLHIVRTVSSIEDFTVDDFSLEGYDPHPAIRMDMA 169


>gi|308234518|ref|ZP_07665255.1| thymidylate synthase [Atopobium vaginae DSM 15829]
 gi|328944113|ref|ZP_08241578.1| thymidylate synthase [Atopobium vaginae DSM 15829]
 gi|327492082|gb|EGF23856.1| thymidylate synthase [Atopobium vaginae DSM 15829]
          Length = 282

 Score =  235 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 18/277 (6%)

Query: 4   YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           ++ + + +I+ G+            D T   T   FG   R+DL + FP LT ++   KS
Sbjct: 8   FISMCKDIIEHGTTTQGEKVRPHWEDGTSAYTIKKFGVCNRYDLREEFPALTLRRTALKS 67

Query: 55  VVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            + E+LW  +  SN   +H     IWD WAD+ G +G  YG Q      Y    +DQ+  
Sbjct: 68  AMDEILWIYQKKSN--NIHDLHSHIWDSWADETGSIGKAYGYQIGVKNHYPEGDMDQMDK 125

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSG 168
           ++  L+ +PYSRR + S +  A + +M L PC     + V + +      L+  L QRS 
Sbjct: 126 VLYDLKHNPYSRRIMTSTYTFADLSQMNLYPCAYSAIYNVTHEEGNPQPTLNMLLIQRSQ 185

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+     +N+  Y++L MM+A V   Q GE +H + D H+Y+ H +     ++R     P
Sbjct: 186 DILAANNWNVCQYAILLMMVAQVNHMQAGELVHMISDAHIYDRHVDIVKELITRPTYPAP 245

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILA-KVSV 264
            + +NP+I +   F  +D  + +Y+    +    ++V
Sbjct: 246 LVHLNPDIHNFYEFTTDDLIVENYQHGPQVKGIPIAV 282


>gi|292657031|ref|YP_003536928.1| thymidylate synthase [Haloferax volcanii DS2]
 gi|291372732|gb|ADE04959.1| thymidylate synthase [Haloferax volcanii DS2]
          Length = 332

 Score =  235 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 110/336 (32%), Positives = 155/336 (46%), Gaps = 78/336 (23%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QYLDL+  V+  G  + +RTGV T S F      DL +GFPLLTTK +    W S++H
Sbjct: 1   MRQYLDLVTDVLGTGRHKPNRTGVDTISGFSKHYTVDLQEGFPLLTTKDLSGFRWNSLIH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102
           ELLW+L G+ ++  L      IWD WAD++G L   YG  WR +P               
Sbjct: 61  ELLWYLSGEEHIRTLREE-TGIWDAWADEEGHLDTAYGRFWRRYPVPEEGLAGEAWPDDG 119

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKL 159
                D    DQ++ ++ +L  +P SRR +++AW+ A      LPPCH  F F V   +L
Sbjct: 120 HRWMNDEGTFDQLAYVLDTLDENPNSRRLVINAWHPANAAVSTLPPCHYTFVFNVQGDEL 179

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN--------- 210
           +  L QRSGD+ LG+PFN+A+Y++L  ++A   GF+ G F HT+ D H+Y          
Sbjct: 180 NLHLTQRSGDIALGVPFNLAAYAILAQVVAQRAGFELGSFAHTIVDAHVYCGAGERGAWY 239

Query: 211 -----------------------------------------NHFEQADLQLSRSPRTLPQ 229
                                                    +H     LQ SR PR  P 
Sbjct: 240 GDHLDELQSRLADVQSPDEYLDVREWLLDAAPEEADGEEDYDHVPGLLLQASREPRERPA 299

Query: 230 MIINPNIVD--LLSFRYEDFTLRSYEPHAAILAKVS 263
           +    ++ D  L    +ED  LR Y+P   I   V+
Sbjct: 300 L----DVADVPLEDLSFEDIVLRDYDPADGIRFAVA 331


>gi|291517888|emb|CBK73109.1| thymidylate synthase [Butyrivibrio fibrisolvens 16/4]
          Length = 283

 Score =  234 bits (598), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 21/276 (7%)

Query: 7   LLRHVIKFGSDRRDR--------TG--VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           + R +++ G+D +D         TG    T   FG   ++DL + FP LT +K   KS +
Sbjct: 11  MCRDILENGTDTKDEIVRPTWQDTGEKAYTIKQFGVVNKYDLREEFPALTLRKTALKSCM 70

Query: 57  HELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
            E+LW  +   +N+  L      +WDEWAD++G +G  YG       ++ G +IDQ+  +
Sbjct: 71  DEVLWIYQRKSNNIHDLK---PHVWDEWADENGSIGTAYGYVVGEKFEFKGEMIDQMDYV 127

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGD 169
           ++ L+  PYSRR + + +    +    L PC     + V   K      L+  L QRS D
Sbjct: 128 LKQLKETPYSRRIMTNLYQFHDLATGHLDPCCYSATYNVTKDKNSDKLVLNMVLNQRSQD 187

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           +     +N+  Y++L MM+A V     G+ IH + D H+Y+ H +     L R     P+
Sbjct: 188 ILAANNWNVCQYAILLMMVAQVNDMIPGQLIHVIADAHIYDRHVDAIKELLERPELPAPK 247

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           + +NP + +   F  +D  +  YE    I    ++V
Sbjct: 248 VRLNPEVKNFYDFTTDDLIVEGYEAGEQIRNIPIAV 283


>gi|169835631|ref|ZP_02868819.1| Thymidylate synthase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 205

 Score =  234 bits (598), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 99/193 (51%), Positives = 127/193 (65%), Gaps = 10/193 (5%)

Query: 82  EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK- 140
            +A++ G+LGP+YGVQWR WPD  G  IDQI + +  ++ +P SRR+IVSAWNVA ID  
Sbjct: 13  AFAEEWGDLGPVYGVQWRKWPDGKGGTIDQIQNAIDMIKNNPMSRRNIVSAWNVAEIDDI 72

Query: 141 ---MALPPCHCLFQFYVDNG------KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASV 191
                LPPCH +FQF V  G      KL   L QRS D+FLG+PFNIASY+LL  M+A V
Sbjct: 73  ARAGGLPPCHTIFQFNVRPGENGEKDKLDLTLTQRSADIFLGVPFNIASYALLLSMIAQV 132

Query: 192 IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRS 251
            G Q GEF+HTL   H+YNNH  Q D QLSR P  LP++ +NP+I ++  F  +D  L  
Sbjct: 133 TGKQPGEFVHTLNSAHIYNNHRVQVDEQLSRHPLPLPKLWLNPDIKNIDDFTIKDIRLEG 192

Query: 252 YEPHAAILAKVSV 264
           YE H+ I A ++V
Sbjct: 193 YESHSPIKAPIAV 205


>gi|255281701|ref|ZP_05346256.1| thymidylate synthase [Bryantella formatexigens DSM 14469]
 gi|255267768|gb|EET60973.1| thymidylate synthase [Bryantella formatexigens DSM 14469]
          Length = 281

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 17/274 (6%)

Query: 6   DLLRHVIKFGSDRR--------DRTG--VGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSV 55
           +  R +++ G+D R        + TG    T   FG   R+DL + FP LT +++  KS 
Sbjct: 10  ETCRDILENGTDTRGEKVRPRWEDTGEFAYTIKKFGVVNRYDLRREFPALTLRRIALKSA 69

Query: 56  VHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
           + E+LW  +  SN   +H     IWD+WAD+ G +G  YG   R    Y G   DQ+  +
Sbjct: 70  MDEILWIYQKKSN--NIHDLNSHIWDQWADESGSIGTCYGDVIRRKFLYKGEETDQMDYV 127

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK----LSCQLYQRSGDVF 171
           ++ LR +PYSRR + + +    +   AL PC     + V   +    L+  L QRS D+ 
Sbjct: 128 LRQLRENPYSRRIMTNMYQYEYLHSGALDPCCYSMTYNVTKTEEGLVLNAVLNQRSQDML 187

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
               +N+A Y++L MM+A V     GE +H + D H+Y+ H       L+R     P++ 
Sbjct: 188 AANGWNVAQYAILLMMVAQVNHMIPGELVHIIADAHIYDRHVPVIRELLTREEHPAPKVW 247

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           +NP + D  +F   D  +  YE    I    ++V
Sbjct: 248 LNPEVTDFYAFTTADLHVEDYETGEQIKNIPIAV 281


>gi|161610414|gb|ABX74962.1| thymidylate synthase-like protein [Retroperitoneal
           fibromatosis-associated herpesvirus]
          Length = 170

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 80/163 (49%), Positives = 109/163 (66%)

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            DY G  +DQ++ ++  ++ +P  RR ++SAWN     KMALPPCH L QFYV  G+LSC
Sbjct: 8   TDYSGRGVDQLAYLINLIKNNPCDRRMVMSAWNPVDTPKMALPPCHVLCQFYVAAGELSC 67

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           QLYQRSGD+ LG+PFNIASY+LLT M+A V G + G+ IH LGD H+Y  H +   +QLS
Sbjct: 68  QLYQRSGDMGLGVPFNIASYALLTYMIAHVCGLRPGDLIHVLGDAHIYKTHLDAVKVQLS 127

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R PR  P++ I  ++  +  F  +DF+L  Y PH AI   ++V
Sbjct: 128 REPRPFPRLNIVRSVASIEEFTADDFSLDGYNPHPAIRMDMAV 170


>gi|218280886|ref|ZP_03487510.1| hypothetical protein EUBIFOR_00068 [Eubacterium biforme DSM 3989]
 gi|218217820|gb|EEC91358.1| hypothetical protein EUBIFOR_00068 [Eubacterium biforme DSM 3989]
          Length = 287

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 19/279 (6%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L + +++ G    +RTG+ T          D+SK FP+LTTK++  +  V E+LW  
Sbjct: 8   YCGLCKDILENGVQVHNRTGIDTIKIPSAHFHLDVSKEFPILTTKQLFIRQAVTEMLWIY 67

Query: 64  RGDSN-VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDG------------NVI 109
           +  SN V +L    V IWD+W  ++DG+             D                  
Sbjct: 68  QAQSNDVRWLQERNVHIWDKWEINEDGDWIDENTGNVLKHFDPSFAHTIGTAYGYIVKKY 127

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           D ++ ++ SL+ D   RR ++S W  + +D   LP C    ++ V +GKL+  ++QRS D
Sbjct: 128 DLMNKLLNSLKNDKEDRRRVISLWQDSELDTAVLPSCVWSSEWDVTDGKLNIWVHQRSCD 187

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP----R 225
           V LG+PFN+  Y++L MM+A V G + G    ++ D H+Y N  +    QL+R       
Sbjct: 188 VPLGLPFNVTQYAVLLMMVAQVTGLKPGTIDWSIKDAHIYVNQVDGIKEQLNRYETKGSL 247

Query: 226 TLPQMIINPNIVDLLSFRY-EDFTLRSYEPHAAILAKVS 263
             P++ +NP++ D   F   +D  L  YE    I   ++
Sbjct: 248 PAPELWLNPDVTDFYDFDPTKDVKLNGYEHMGKISFPLA 286


>gi|110668372|ref|YP_658183.1| thymidylate synthase [Haloquadratum walsbyi DSM 16790]
 gi|109626119|emb|CAJ52571.1| thymidylate synthase [Haloquadratum walsbyi DSM 16790]
          Length = 336

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 153/338 (45%), Gaps = 78/338 (23%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           MHQY DL+  V++ G  + +RTGV T S+F      +L  GFPLLTTK +    W S++ 
Sbjct: 1   MHQYRDLVTAVLRSGEHKPNRTGVDTISSFSQHYTINLRDGFPLLTTKDLSGSRWHSLLS 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP--------------- 102
           E +W+L G+ ++  L     SIWD WAD DG L   YG  WR +P               
Sbjct: 61  EFVWYLSGEEHIRSLREE-TSIWDAWADDDGRLETAYGRFWRRYPVPSTDSQLPGEAWPV 119

Query: 103 -----DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
                  D    DQ++  ++ L+ +P SRR ++SAW+ A      LPPCH  F F V N 
Sbjct: 120 DDHRWRNDDGTFDQLAYAIEQLQENPQSRRIVISAWHPANAAISTLPPCHYTFVFNVQNN 179

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN------- 210
           +L+  L QRSGD+ LG+PFNIA+YSLL  ++A       G F H++ D H+Y        
Sbjct: 180 RLNVHLTQRSGDIALGVPFNIAAYSLLATVIAQQTELTPGTFAHSIVDAHIYCGMGDRGA 239

Query: 211 ---------------------------------------------NHFEQADLQLSRSPR 225
                                                        +H      Q +RSPR
Sbjct: 240 WYGEGETLDSLRNRLEAVDNPSEYRDVRSWLLESAPSEPANQSGYDHIPGLLEQCARSPR 299

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           + PQ+ I+   V L     E+  L  Y+P  AI   V+
Sbjct: 300 SKPQVAIDD--VSLDDIGVENIHLSGYDPAPAIRFAVA 335


>gi|76802103|ref|YP_327111.1| thymidylate synthase [Natronomonas pharaonis DSM 2160]
 gi|76557968|emb|CAI49553.1| thymidylate synthase [Natronomonas pharaonis DSM 2160]
          Length = 342

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 156/344 (45%), Gaps = 84/344 (24%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVH 57
           M QY DL+  V+  G+ + +RTGV T ++F +    DL  GFPLLTTK++    W S++H
Sbjct: 1   MQQYHDLVSDVLAGGTHKPNRTGVDTIASFSHHYEVDLGAGFPLLTTKRMDGYRWNSLIH 60

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG----------- 106
           ELLW+L G+ ++  L      IWD WAD +G L   YG  WR +P  D            
Sbjct: 61  ELLWYLSGEEHIRTLREE-TKIWDAWADDEGHLDTAYGRFWRRFPVPDEPARLPGESWPD 119

Query: 107 -----------------NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
                             V DQ++ ++ +L  +P+SRR +V+AW+ A      LPPCH  
Sbjct: 120 DSHRWTTTETTPDGTERQVFDQLAYVLDTLEENPHSRRLVVNAWHPANAAVSTLPPCHYT 179

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           F F V   +L+  L QRSGD+ LG+PFN+A+YSLL   +A+   F+ G F HT+ D H+Y
Sbjct: 180 FVFNVQGDQLNVHLTQRSGDIALGVPFNLAAYSLLAHAVANRTAFEVGSFGHTIVDAHIY 239

Query: 210 --------------------------------------------------NNHFEQADLQ 219
                                                              +H      Q
Sbjct: 240 CGAGDRGAWYADKLPALQDRLNDIDDREEYVDVREWLESEAPAEADDEGGLDHVPGLLTQ 299

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           LSRSPR  P++ +      L    Y+D  L  Y+P   I   V+
Sbjct: 300 LSRSPRDRPEIEVADRP--LDDLEYDDVQLHDYDPAPGISFSVA 341


>gi|269468616|gb|EEZ80260.1| thymidylate synthase [uncultured SUP05 cluster bacterium]
          Length = 284

 Score =  232 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 20/284 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M  Y+D+ + ++  G      RTG  T +  G     DLS G  P++TTKK+ WK+ V E
Sbjct: 1   MKTYIDIGKRILDEGEWVTNTRTGKKTLTIIGATFEHDLSDGTVPVITTKKLFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDY-D 105
           +L ++RG  + +     G + W+  A+++             ++G  YGV  R++P   D
Sbjct: 61  MLGYIRGYRSAAQFRSIGCNTWNANANENQAWLDNPHRLGKDDMGLCYGVIGRAFPGIED 120

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
              +DQ   IV  L      RR I++  +  LI +  LP C     F +    L  + YQ
Sbjct: 121 DEPLDQYKKIVDDLSKGVDDRREILTFNHPNLIHRACLPACMHTHHFNLLGDNLYIESYQ 180

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSP 224
           RS D  LG PFN    + L ++ A + G       H L ++HLY +  +     Q+ R P
Sbjct: 181 RSSDFALGQPFNHFQVAFLLLITAQITGKTPKTMRHHLSNIHLYEDQVDTFKNEQVEREP 240

Query: 225 RTLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             LP+  INP+I  L         +DF L  YE H AI    +V
Sbjct: 241 MALPKFKINPDIKTLEDLETWVTMDDFELIDYEHHPAIKYPFTV 284


>gi|311992971|ref|YP_004009838.1| Td thymidylate synthetase [Acinetobacter phage Acj61]
 gi|295815260|gb|ADG36186.1| Td thymidylate synthetase [Acinetobacter phage Acj61]
          Length = 317

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 89/310 (28%), Positives = 137/310 (44%), Gaps = 47/310 (15%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M +Y   LR +I  G D   DRTGVGT + FG   ++D+S+  P+LT +KV WKS+V E+
Sbjct: 9   MREYDLALRDIIDNGFDIDGDRTGVGTVAKFGINTKYDISERVPVLTKRKVAWKSIVKEV 68

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK---------DGELGPIYGVQWRSWPD------- 103
           LW++ G SN++ L   G  IW  W  K         +G  G +YG     +         
Sbjct: 69  LWYISGSSNINDLEAMGAKIWTPWKSKEFETKHGFVEGSAGYVYGFNLIHFGADVKQVES 128

Query: 104 ---------------------YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
                                      +Q+  ++ +LRA+P SR+   + W     ++  
Sbjct: 129 RRLAEQNPFNNVDEHMLDKIYPKSKGFNQLDYVINTLRANPKSRQACFTFWRPDTNNQAI 188

Query: 143 LPPCHCLFQFYVDNGK------LSCQLYQRSGDVFLGIPF-NIASYSLLTMMLASVIGFQ 195
           LP CH  + F V   +      L+C L+QRS D  +G+   NI + +L T M+A  +G +
Sbjct: 189 LPACHAFYSFIVSPDENGEMNVLNCHLFQRSADYPIGVGMGNIWTATLFTYMIAQQLGMK 248

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRT-LPQMIINPNIVDLLSFRYEDFTLRSYEP 254
            G   H+    H+Y N  +     L R      P + +N     +  +  EDF L  Y P
Sbjct: 249 PGHVYHSGAHCHVYKNAIDATVEYLEREDEPDSPILKLN-KRDSIYDYVPEDFELIDYNP 307

Query: 255 HAAILAKVSV 264
              I   ++V
Sbjct: 308 LPPIKFDIAV 317


>gi|328955412|ref|YP_004372745.1| thymidylate synthase [Coriobacterium glomerans PW2]
 gi|328455736|gb|AEB06930.1| thymidylate synthase [Coriobacterium glomerans PW2]
          Length = 282

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 20/275 (7%)

Query: 7   LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
           +   +++ G+  +         D     T  +FG   R+DL + FP LT ++   KS + 
Sbjct: 11  MCEDILENGTSTQGERVRPRWADGASAYTLKSFGVTARYDLREEFPALTLRRTALKSAMD 70

Query: 58  ELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           E+LW  +   +NV  L      IWD WAD+ G +G  YG Q      Y     DQ+  ++
Sbjct: 71  EVLWIYQRKSNNVHDL---NSHIWDRWADESGSIGKAYGYQIAQLSRYPEGEFDQMDRVL 127

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDV 170
             L   PYSRR + S +  A +  M L PC     + V      D   L+  L QRS DV
Sbjct: 128 YDLSHTPYSRRIMTSTYTFADLSDMHLYPCAYSCTYNVTRCPGDDALTLNMVLMQRSQDV 187

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
                +N+  Y+LL MM+A V G   GE +H + D H+Y+ H E     + R     P++
Sbjct: 188 LAANNWNVCQYALLLMMVAQVSGMIPGELLHVIADAHIYDRHVEIVRELIGRPRHPAPKV 247

Query: 231 IINPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
            +NP++ D  +F  +D  +  Y     I    ++V
Sbjct: 248 ALNPDVTDFYAFTTDDLLVCDYVHGPQIKDIPIAV 282


>gi|182682904|ref|YP_001837028.1| thymidylate synthase [Enterobacteria phage EPS7]
 gi|182630616|gb|ACB97548.1| thymidylate synthase [Enterobacteria phage EPS7]
          Length = 284

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 20/284 (7%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QY++  + +++ G    + RTGV   +       F++  G  PL+TT+K   K  + E
Sbjct: 1   MKQYIETGKRILEEGVWVTNPRTGVRCLTIIDADFTFNVGAGELPLVTTRKAFAKQAIME 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           ++ +LRG  + +     GV+ W+  A+++             ++G +YGVQ R W + DG
Sbjct: 61  MIGYLRGYDSAAQFRAIGVNTWNANANENIAWLGNPFRKGEDDMGRVYGVQGRHWTNSDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
            V DQ++ +  +L+     R  I++        K  L PC    QF +    L    +QR
Sbjct: 121 MVFDQLAKVYHNLKRGIDDRGEILTFGTRGEFRKGCLRPCMHTHQFSILGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSP 224
           S D  LG  FN+     L  ++A + G + G     + ++H+Y + +       Q  R P
Sbjct: 181 SNDFLLGQVFNMVQCYALLAIMAQITGLKPGIARQKIINLHIYEDQYNVLMEHKQFDREP 240

Query: 225 RTLPQMIINPNIVDLLS-FRY---EDFTLRSYEPHAAILAKVSV 264
              P + INPNI  L     +   +DFT+R YE H AI    +V
Sbjct: 241 FAPPTLEINPNIRTLDDVLTWVSKDDFTVRGYEHHPAIAYPFTV 284


>gi|237737848|ref|ZP_04568329.1| thymidylate synthase [Fusobacterium mortiferum ATCC 9817]
 gi|229419728|gb|EEO34775.1| thymidylate synthase [Fusobacterium mortiferum ATCC 9817]
          Length = 274

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54
           Y D++  + K+G            D T    +S  GYQ R D S     L+TT+    K+
Sbjct: 8   YKDIVETIDKYGIWSEGNVRTKYADGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPNKA 67

Query: 55  VVHELLWFL-RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      +NV  L++     WDEW  +DG +G  YG Q             Q+ 
Sbjct: 68  PIRELYWIWIMQSNNVEELNKLKCKFWDEWKMEDGTIGKAYGYQ---IAKQTFGYKSQLD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            I+  ++ +P SRR +   W    +DKMAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 125 YIINEIKKNPNSRRIMTEIWVPEDLDKMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 184

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  + I ++ +VH+Y+ H      Q+ R       + I 
Sbjct: 185 LVANVFQYSVLHKLVAMECGLEPADIIWSIHNVHIYDRHMPVLLEQIKREEFEGAILKI- 243

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  + +Y+    I  +V++
Sbjct: 244 ENFTSIYDFKPDDVVVENYKYGDKISYEVAI 274


>gi|326632978|ref|YP_004306567.1| thymidylate synthase [Enterobacteria phage SPC35]
 gi|321272172|gb|ADW80064.1| thymidylate synthase [Enterobacteria phage SPC35]
          Length = 284

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 20/284 (7%)

Query: 1   MHQYLDLLRHVIKFGSDRRD-RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QY+++ + ++  G    + RTGV   +       F++  G FPL+TT+K   K  + E
Sbjct: 1   MDQYIEVGKRILSDGQWVTNPRTGVRCLTIVDADFTFNVGAGEFPLITTRKAFAKQAIME 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           ++ +LRG  + +     GV+ W+  A+++             ++G +YGVQ R W + DG
Sbjct: 61  MIGYLRGYDSAAQFRAIGVNTWNANANENSAWLDNPYRKGEDDMGRVYGVQGRQWTNSDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
            + DQ++ I  +L+     R  I++ WN     K  L PC    QF +    L    +QR
Sbjct: 121 LMFDQLAKIYHNLKKGIDDRGEILTFWNPGEFSKGCLRPCMHTHQFSILGDTLYLNSFQR 180

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL--QLSRSP 224
           S D  LG  FN+     L  ++A + G + G     + ++H+Y + +       Q  R P
Sbjct: 181 SNDFLLGQVFNMVQCYTLLALMAQITGLKPGIARQKIINLHIYEDQYNVLMEHKQFDRKP 240

Query: 225 RTLPQMIINPNIVDLLS----FRYEDFTLRSYEPHAAILAKVSV 264
              P + INPNI  L         +DFT+R YE H AI    +V
Sbjct: 241 FAPPTLEINPNIRTLEDVLTWVSKDDFTVRGYEHHPAIAYPFTV 284


>gi|262067846|ref|ZP_06027458.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693]
 gi|291378569|gb|EFE86087.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693]
          Length = 275

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 78/279 (27%), Positives = 132/279 (47%), Gaps = 19/279 (6%)

Query: 1   MHQ-----YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLT 46
           M +     Y +++  + + G            D T    +S  GYQ R D S     LLT
Sbjct: 1   MKKSFDEIYKNIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAFLLT 60

Query: 47  TKKVHWKSVVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD 105
           T++  WKS + E+ W      +NV+ L + G   W+E+  KDG +G  YG Q        
Sbjct: 61  TRQCPWKSAIKEIYWIWLLQSNNVNELEKLGCKFWNEFKLKDGTIGKSYGHQL---AKET 117

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQ 165
                Q+  ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ Q
Sbjct: 118 FGYKSQLHYVINELKENPNSRRIMTEIWIPEELHEMALTPCVHLTQWSVIGNKLYLEVRQ 177

Query: 166 RSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           RS DV LG+  N+  YS+L  ++A   G +  E I  + +VH+Y+ H+++   Q+     
Sbjct: 178 RSCDVALGLVANVFQYSVLHKLVALECGLEPAEIIWNIHNVHIYDRHYDKLIKQVDGETF 237

Query: 226 TLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              ++ IN N   +  F+ +D  + +Y+    I  ++++
Sbjct: 238 EPAKIKIN-NFKSIFDFKPDDIEVINYKYGEKINYEIAI 275


>gi|294644847|ref|ZP_06722587.1| thymidylate synthase [Bacteroides ovatus SD CC 2a]
 gi|292639785|gb|EFF58063.1| thymidylate synthase [Bacteroides ovatus SD CC 2a]
          Length = 151

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 96/151 (63%), Positives = 121/151 (80%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL  V+  G+++ DRTG GT S FG+QMRF+L  GFP LTTKK+H KS+++ELL
Sbjct: 1   MKQYLDLLNRVLTEGTEKSDRTGTGTISIFGHQMRFNLDDGFPCLTTKKLHLKSIIYELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+NV YL  HGV IW+EWAD++G+LG +YG QWRSWPDY+G  IDQIS +V++L+
Sbjct: 61  WFLQGDTNVKYLQEHGVRIWNEWADENGDLGHVYGYQWRSWPDYNGGFIDQISEVVETLK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQ 151
            +P SRR IVSAWNVA ++ M LPPCH  FQ
Sbjct: 121 HNPDSRRIIVSAWNVADLNNMNLPPCHAFFQ 151


>gi|15226577|ref|NP_179750.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
           / DHFR-TS, putative [Arabidopsis thaliana]
 gi|4567234|gb|AAD23649.1| putative dihydrofolate reductase-thymidylate synthase [Arabidopsis
           thaliana]
 gi|330252101|gb|AEC07195.1| bifunctional dihydrofolate reductase/thymidylate synthase
           [Arabidopsis thaliana]
          Length = 492

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 22/260 (8%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L++++I  G    +     T S FG QMRF+L K FPLLTTKK+ W  VV E+L  +
Sbjct: 238 YLNLVQNIISSGDMNDN----STLSKFGCQMRFNLRKTFPLLTTKKIFWLGVVEEILQLI 293

Query: 64  RGDSNVSYLHRHGVSIWDEWA-------------DKDGELGPIYGVQWRSWPDYDG-NVI 109
            G +N      +G  IWD                ++DG+   ++G+ W+           
Sbjct: 294 SGSNNPK---ENGSHIWDTDEAKEYLDSFGVNATEEDGDNPFLHGLHWKHCDARFVIQEF 350

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
            Q+S ++  ++ +P+ +R +++A N     K+++ PCH   QFYV NG++SCQ+YQ S +
Sbjct: 351 SQLSDVINKIKNNPHDQRIMLAACNPLDF-KLSVSPCHTFTQFYVANGEVSCQIYQSSTE 409

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
             +GIPF+IA+YSLLT ++A V     G+FIH +G  ++   H +    QL  SP+  P 
Sbjct: 410 ASIGIPFSIATYSLLTCIIAHVCDLGAGDFIHVIGQAYINKAHVKAIQKQLQISPKPFPI 469

Query: 230 MIINPNIVDLLSFRYEDFTL 249
           + INP    + +F   D  L
Sbjct: 470 LKINPEKKKMDNFEASDLEL 489


>gi|302335591|ref|YP_003800798.1| thymidylate synthase [Olsenella uli DSM 7084]
 gi|301319431|gb|ADK67918.1| thymidylate synthase [Olsenella uli DSM 7084]
          Length = 282

 Score =  225 bits (573), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 18/274 (6%)

Query: 7   LLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
           +   +I+ G+            D T   T   FG   R+DL + FP LT ++   +S + 
Sbjct: 11  MCTDIIERGTTTEGQRVRPHWEDGTPAYTIKQFGVCNRYDLREEFPALTLRRTALRSAMD 70

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           E+LW  +  SN   +H     IWDEWAD+ G +G  YG Q      Y    +DQ+  ++ 
Sbjct: 71  EVLWIYQKKSN--NIHDLSSHIWDEWADESGSIGKAYGYQIAQKSHYPEGDMDQMDRVLF 128

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV------DNGKLSCQLYQRSGDVF 171
            LR++PYSRR + S +  A + +M L PC     + V      +   L+  L QRS D+ 
Sbjct: 129 DLRSNPYSRRIMTSTYTFADLSEMNLYPCAFNVIYNVTQTPGEERPSLNMLLVQRSQDIL 188

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
               +N+  Y++L MM+A       GE +H + D H+Y+ H +     ++R     P++ 
Sbjct: 189 AANNWNVCQYAILLMMVAQTNDMVAGELVHMISDAHIYDRHVDIVRELIARPTYPAPKVS 248

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAIL-AKVSV 264
           + P++ D   F  +D  +  Y     +    ++V
Sbjct: 249 LRPDVHDFYDFTTDDLIVCDYNHGPQVKDIPIAV 282


>gi|167751275|ref|ZP_02423402.1| hypothetical protein EUBSIR_02261 [Eubacterium siraeum DSM 15702]
 gi|167655782|gb|EDR99911.1| hypothetical protein EUBSIR_02261 [Eubacterium siraeum DSM 15702]
 gi|291556779|emb|CBL33896.1| thymidylate synthase [Eubacterium siraeum V10Sc8a]
          Length = 275

 Score =  224 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 126/259 (48%), Gaps = 14/259 (5%)

Query: 8   LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
            R +I+ GS            D T   T   F    R++L + FP++T ++++++S + E
Sbjct: 12  CRDIIEHGSWDTNSEVRPRWEDGTPAHTVKKFCVVNRYNLQEEFPVMTLRRIYYRSAIEE 71

Query: 59  LLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           +LW  +  SN V+ L      IWD WAD++G +G  YG Q      Y     DQ+  ++ 
Sbjct: 72  ILWIYQKKSNRVADLS---THIWDSWADENGTIGKAYGWQLGQKSIYPEGEFDQVDKVLY 128

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
            L  +P SRR + + +N   + +M L PC     F V    L+  L QRS D+     +N
Sbjct: 129 DLSHNPASRRIMTNMYNHKDLHEMGLAPCAYSMTFNVTGDTLNAILNQRSQDMLTANNWN 188

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           +  Y+ L +M A   G + GE +H + D H+Y+ H +     + + P   P+M++  +I 
Sbjct: 189 VCQYAALLIMFAKASGLKAGELVHVIADAHIYDRHIDAVKRIIEKEPYPAPEMVV-EDIT 247

Query: 238 DLLSFRYEDFTLRSYEPHA 256
           D   F    FTL+ Y+ H 
Sbjct: 248 DFYKFTKNSFTLKDYKYHD 266


>gi|291531667|emb|CBK97252.1| thymidylate synthase [Eubacterium siraeum 70/3]
          Length = 275

 Score =  224 bits (572), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 126/259 (48%), Gaps = 14/259 (5%)

Query: 8   LRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
            R +I+ GS            D T   T   F    R++L + FP++T ++++++S + E
Sbjct: 12  CRDIIEHGSWDTNSEVRPRWEDGTPAHTVKKFCVVNRYNLQEEFPVMTLRRIYYRSAIEE 71

Query: 59  LLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           +LW  +  SN V+ L      IWD WAD++G +G  YG Q      Y     DQ+  ++ 
Sbjct: 72  ILWIYQKKSNRVADLS---THIWDSWADENGTIGKAYGWQLGQKSIYPEGEFDQVDRVLY 128

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
            L  +P SRR + + +N   + +M L PC     F V    L+  L QRS D+     +N
Sbjct: 129 DLSHNPASRRIMTNMYNHKDLHEMGLAPCAYSMTFNVTGDTLNAILNQRSQDMLTANNWN 188

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
           +  Y+ L +M A   G + GE +H + D H+Y+ H +     + + P   P+M++  +I 
Sbjct: 189 VCQYAALLIMFAKASGLKAGELVHVIADAHIYDRHIDAVKRIIEKEPYPAPEMVV-EDIT 247

Query: 238 DLLSFRYEDFTLRSYEPHA 256
           D   F    FTL+ Y+ H 
Sbjct: 248 DFYKFTKNSFTLKDYKYHD 266


>gi|18466784|ref|NP_569591.1| putative thymidylate synthase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16506100|emb|CAD09986.1| putative thymidylate synthase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
          Length = 371

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 105/349 (30%), Positives = 152/349 (43%), Gaps = 88/349 (25%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           Y  ++  V+  G    DRTG GT+S       + L+ G  PL++ K V+ K ++ EL W+
Sbjct: 23  YAKVVETVLNSGVHAGDRTGTGTKSVSYVPSYYMLTGGSVPLISGKAVNLKPLLVELEWY 82

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----------------- 105
           L+G  N+ +L  +GV IWD WAD++G+LGP+YG QWR W D                   
Sbjct: 83  LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIDTFRER 142

Query: 106 -----------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
                               IDQ+  IV +LR +P  RR +++AWNV  ++ M LPPCH 
Sbjct: 143 GYKVEGYLGVSEDRVVLSREIDQLQRIVHTLRTNPTDRRILLNAWNVGELEDMKLPPCHF 202

Query: 149 LFQFY---------------------------------------------------VDNG 157
           +F  +                                                   +   
Sbjct: 203 VFSLWSRKLDFETRLTMATDIGIQHNRHGHESIYTQMLCLLERDGGITENLLDELGIPKR 262

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
            L+  L QRS D F+G+PFNIA Y +LT  LA + G   G F+H   DVHLY+NH    +
Sbjct: 263 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYDNHMGGVE 322

Query: 218 LQLSRSP--RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             + R P   + P +I      +L  F++E   +  Y P   I   V+V
Sbjct: 323 ELMKREPPKESDPVVIFPHEWAELDDFKWEGVQVCGYSPLPWIKVPVAV 371


>gi|19703585|ref|NP_603147.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|22096218|sp|Q8RGP6|TYSY_FUSNN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|19713687|gb|AAL94446.1| Thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 275

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54
           Y D++  + + G            D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKDIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      +NV  L+  G   WDEW  +DG +G  YG Q             Q+ 
Sbjct: 69  PIRELYWIWILQSNNVDVLNELGCKFWDEWKMQDGTIGKAYGYQ---IAQETFGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELKKNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  E I  + ++H+Y+ H+++   Q++R      ++ IN
Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  +  Y+    +  +V++
Sbjct: 246 -NFKSIFDFKPDDIEIIDYKYGEKVSYEVAI 275


>gi|228904773|ref|ZP_04068827.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222]
 gi|228854787|gb|EEM99391.1| Thymidylate synthase [Bacillus thuringiensis IBL 4222]
          Length = 306

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 30/283 (10%)

Query: 6   DLLRHVI------KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           D L+ ++         +   D + + T+  FG   R+DLSK FP  TT+ +  K++  E+
Sbjct: 30  DTLKLILAQEWIPDNRAVWEDGSPIATKRIFGVVNRYDLSKEFPAPTTRPLPLKTIFDEV 89

Query: 60  LWFLRG-DSNVSYLHRHGVSIWDEWA-----------------DKDGELGPIYGVQWRSW 101
            W  R   +NV+ +      IW++WA                 +K G +G  YG Q    
Sbjct: 90  DWIYRKRSNNVNDMRA---KIWNQWAFKKTRLRFSKTFPFVRLEKKGSIGEAYGYQV--- 143

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
                   +Q+  ++  L+ DP++RR ++  WNV    +M LPPC    QF+ D  K + 
Sbjct: 144 AKPIFGYDNQMDYVLGELKRDPFTRRAVIEMWNVDDTGRMNLPPCAHHLQFWSDGKKTNL 203

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            L QRS D      FN+  Y++L  M+A  IG + GE +H +GD H+YN H E A+  + 
Sbjct: 204 ILKQRSQDFVTANAFNVCEYAILLHMVARHIGQEVGELLHIIGDCHIYNKHLELAEELVK 263

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + INP   D  SF  +DF L +Y+ H  +  +V+V
Sbjct: 264 REPYAAPTLWINPEKTDFYSFTADDFRLENYDKHPQMKIEVAV 306


>gi|255019178|ref|ZP_05291304.1| thymidylate synthase [Listeria monocytogenes FSL F2-515]
          Length = 179

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 94/169 (55%), Positives = 121/169 (71%)

Query: 81  DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           + +A+K GELG IYG QWR W    G  IDQ++ +++ ++ +P SRR IVSAWN   I  
Sbjct: 11  EAFANKYGELGNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIVSAWNPEDIPN 70

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
           MALPPCH LFQFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  +G   GEFI
Sbjct: 71  MALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAREVGLDVGEFI 130

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
           HT+GD HLYNNH EQ   QLSR+P  LP+++++     +  F   D +L
Sbjct: 131 HTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFDVADISL 179


>gi|289812599|ref|ZP_06543228.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 144

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 84/144 (58%), Positives = 102/144 (70%)

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            DP SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIAS
Sbjct: 1   NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS 60

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           Y+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L 
Sbjct: 61  YALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLF 120

Query: 241 SFRYEDFTLRSYEPHAAILAKVSV 264
            +R++DF +  Y+PH  I A V++
Sbjct: 121 DYRFDDFEIEGYDPHPGIKAPVAI 144


>gi|75758390|ref|ZP_00738513.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74494116|gb|EAO57209.1| Thymidylate synthase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 286

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 30/283 (10%)

Query: 6   DLLRHVI------KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           D L+ ++         +   D + + T+  FG   R+DLSK FP  TT+ +  K++  E+
Sbjct: 10  DTLKLILAQEWIPDNRAVWEDGSPIATKRIFGVVNRYDLSKEFPAPTTRPLPLKTIFDEV 69

Query: 60  LWFLRG-DSNVSYLHRHGVSIWDEWA-----------------DKDGELGPIYGVQWRSW 101
            W  R   +NV+ +      IW++WA                 +K G +G  YG Q    
Sbjct: 70  DWIYRKRSNNVNDMRA---KIWNQWAFKKTRLRFSKTFPFVRLEKKGSIGEAYGYQV--- 123

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
                   +Q+  ++  L+ DP++RR ++  WNV    +M LPPC    QF+ D  K + 
Sbjct: 124 AKPIFGYDNQMDYVLGELKRDPFTRRAVIEMWNVDDTGRMNLPPCAHHLQFWSDGKKTNL 183

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            L QRS D      FN+  Y++L  M+A  IG + GE +H +GD H+YN H E A+  + 
Sbjct: 184 ILKQRSQDFVTANAFNVCEYAILLHMVARHIGQEVGELLHIIGDCHIYNKHLELAEELVK 243

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           R P   P + INP   D  SF  +DF L +Y+ H  +  +V+V
Sbjct: 244 REPYAAPTLWINPEKTDFYSFTADDFRLENYDKHPQMKIEVAV 286


>gi|296327655|ref|ZP_06870198.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296155245|gb|EFG96019.1| thymidylate synthase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 275

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54
           Y D++  + + G            D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKDIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      +NV  L+  G   W+EW  +DG +G  YG Q             Q+ 
Sbjct: 69  PIRELYWIWILQSNNVDVLNELGCKFWNEWKMQDGTIGKAYGYQ---IAQETFGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELKKNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  E I  + ++H+Y+ H+++   Q++R      ++ IN
Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  +  Y+    +  +V++
Sbjct: 246 -NFKSIFDFKPDDIEIIDYKYGEKVSYEVAI 275


>gi|34763229|ref|ZP_00144192.1| Thymidylate synthase [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|237741125|ref|ZP_04571606.1| thymidylate synthase [Fusobacterium sp. 4_1_13]
 gi|294784655|ref|ZP_06749944.1| thymidylate synthase [Fusobacterium sp. 3_1_27]
 gi|27887109|gb|EAA24217.1| Thymidylate synthase [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|229430657|gb|EEO40869.1| thymidylate synthase [Fusobacterium sp. 4_1_13]
 gi|294487871|gb|EFG35230.1| thymidylate synthase [Fusobacterium sp. 3_1_27]
          Length = 275

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54
           Y +++  + + G            D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKNIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      +NV  L + G   WDEW  +DG +G  YG Q             Q+ 
Sbjct: 69  PIRELYWIWILQSNNVDVLDKLGCKFWDEWKMQDGTIGKAYGYQ---IAKETFGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELKNNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  E I  + ++H+Y+ H+++   Q++R      ++ IN
Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRKTFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  +  Y+    +  +V++
Sbjct: 246 -NFKSIFDFKPDDIEIIDYKYGEKVSYEVAI 275


>gi|256846261|ref|ZP_05551718.1| thymidylate synthase [Fusobacterium sp. 3_1_36A2]
 gi|256718030|gb|EEU31586.1| thymidylate synthase [Fusobacterium sp. 3_1_36A2]
          Length = 275

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54
           Y +++  + + G            D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKNIVDTIAEKGIWSEGNVRTKYVDGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      +NV  L + G   WDEW  +DG +G  YG Q             Q+ 
Sbjct: 69  PIRELYWIWILQSNNVDVLDKLGCKFWDEWKMQDGTIGKAYGYQ---IAKETFGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELKNNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  E I  + ++H+Y+ H+++   Q++R      ++ IN
Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRKTFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  +  Y+    +  +V++
Sbjct: 246 -NFKSIFDFKPDDIEIIDYKYGEKVSYEVAI 275


>gi|213416590|ref|ZP_03349734.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 142

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 83/142 (58%), Positives = 101/142 (71%)

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           P SRR IVSAWNV  +DKMAL PCH  FQFYV +GKLSCQLYQRS DVFLG+PFNIASY+
Sbjct: 1   PDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYA 60

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I      L  +
Sbjct: 61  LLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIKRKPDSLFDY 120

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
           R++DF +  Y+PH  I A V++
Sbjct: 121 RFDDFEIEGYDPHPGIKAPVAI 142


>gi|293411959|ref|ZP_06654684.1| thymidylate synthase [Escherichia coli B354]
 gi|220980066|emb|CAP72258.1| Thymidylate synthase (EC 2.1.1.45) (TS) (TSase) [Escherichia coli
           LF82]
 gi|291469514|gb|EFF12003.1| thymidylate synthase [Escherichia coli B354]
          Length = 367

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 154/349 (44%), Gaps = 88/349 (25%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           Y  ++  V+K G    DRTG GT ST      + L+ G  PL++ K V+ K ++ EL W+
Sbjct: 19  YAKVIETVLKSGVQADDRTGTGTLSTCYVPSYYMLTGGTVPLISGKAVNLKPLLVELEWY 78

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----------------- 105
           L+G  N+ +L  +GV IWD WAD++G+LGP+YG QWR W D                   
Sbjct: 79  LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIATFRER 138

Query: 106 -----------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
                               IDQ+  IV +LR +P  RR +++AWNV  ++ M LPPCH 
Sbjct: 139 GYKVEGYLGISEDRVVLSREIDQLQRIVDTLRTNPTDRRIMLNAWNVGELEDMKLPPCHF 198

Query: 149 LFQFY---------------------------------------------------VDNG 157
           +F  +                                                   +   
Sbjct: 199 VFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLYDLEMDGSVTEAELDELGIPKR 258

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
            L+  L QRS D F+G+PFNIA Y +LT  LA + G   G F+H   DVHLYNNH E   
Sbjct: 259 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYNNHMEGVC 318

Query: 218 LQLSRS--PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             + R     + P +I      +L  F++++  +  Y+P   I   V+V
Sbjct: 319 ELMKRQAPEHSDPVVIFPHEWSELDDFKWDEVLILGYDPLPWIKVPVAV 367


>gi|317062887|ref|ZP_07927372.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185]
 gi|313688563|gb|EFS25398.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185]
          Length = 276

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54
           Y +++  + K G            D T    +S  GYQ R D S     L+TT+    K+
Sbjct: 10  YKEIVETIDKKGIWSEGNVRTKYADGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPSKA 69

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W     SN V  L++     WDEW  +DG +G  YG Q             Q+ 
Sbjct: 70  PIRELYWIWIMQSNDVDELNKLKCKFWDEWKMEDGTIGKAYGYQ---IAKQTFGYRSQLD 126

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            +V+ L+ +P SRR +   W    +DKMAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 127 YVVEELKKNPNSRRIMTEIWVPEDLDKMALTPCVHLTQWSVIGSKLYLEVRQRSCDVALG 186

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  E I  + +VH+Y+ H  +   Q+ R       + I 
Sbjct: 187 LVANVFQYSILHKLVAMECGLEPAEIIWNIHNVHIYDRHMPELLEQIKRPSINGATVKI- 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  + +Y+    I  +V++
Sbjct: 246 ENFKSIYDFKPDDIVVETYQYGDKISYEVAI 276


>gi|257468630|ref|ZP_05632724.1| thymidylate synthase [Fusobacterium ulcerans ATCC 49185]
          Length = 274

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54
           Y +++  + K G            D T    +S  GYQ R D S     L+TT+    K+
Sbjct: 8   YKEIVETIDKKGIWSEGNVRTKYADGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPSKA 67

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W     SN V  L++     WDEW  +DG +G  YG Q             Q+ 
Sbjct: 68  PIRELYWIWIMQSNDVDELNKLKCKFWDEWKMEDGTIGKAYGYQ---IAKQTFGYRSQLD 124

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            +V+ L+ +P SRR +   W    +DKMAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 125 YVVEELKKNPNSRRIMTEIWVPEDLDKMALTPCVHLTQWSVIGSKLYLEVRQRSCDVALG 184

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  E I  + +VH+Y+ H  +   Q+ R       + I 
Sbjct: 185 LVANVFQYSILHKLVAMECGLEPAEIIWNIHNVHIYDRHMPELLEQIKRPSINGATVKI- 243

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  + +Y+    I  +V++
Sbjct: 244 ENFKSIYDFKPDDIVVETYQYGDKISYEVAI 274


>gi|256028293|ref|ZP_05442127.1| thymidylate synthase [Fusobacterium sp. D11]
 gi|289766222|ref|ZP_06525600.1| thymidylate synthase [Fusobacterium sp. D11]
 gi|289717777|gb|EFD81789.1| thymidylate synthase [Fusobacterium sp. D11]
          Length = 275

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54
           Y +++  + + G   +        D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKNIVDTIAEKGIWSKGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      +NV  L + G   WDEW  +DG +G  YG Q             Q+ 
Sbjct: 69  PIRELYWIWILQSNNVDILDKLGCKFWDEWKMQDGTIGKAYGYQ---IAKETFGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELKNNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  E I  + ++H+Y+ H+++   Q++R      ++ IN
Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  +  Y+    +  +V++
Sbjct: 246 -NFKSIFDFKPDDVEILDYKYGEKVSYEVAI 275


>gi|296417089|ref|XP_002838196.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634113|emb|CAZ82387.1| unnamed protein product [Tuber melanosporum]
          Length = 293

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 89/281 (31%), Positives = 132/281 (46%), Gaps = 21/281 (7%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG--FPLLTTKKVHWKSVVHEL 59
           + YLDL+R+++  G  R D+   GT S F         +    P+L+TK V  K +++EL
Sbjct: 16  YHYLDLVRNMLTNGEQRPDKRRAGTTSLFATPTAPPQPEKPHTPVLSTKHVFQKVILYEL 75

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDGN 107
            WF+ G +N   +   G  I +    +              +LGP+YG Q R        
Sbjct: 76  FWFISGSTNNVPVSAVGAKILEGDGSRAYLDCIGLTERAQRDLGPVYGFQLRHIG---AK 132

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK----LSCQL 163
            +D         +       H+    + +  D +A     C F     +GK    L C L
Sbjct: 133 YVDCHMGYPVQCKHHLRPHHHVRMESDRSGEDGVAAVSHVCQFYVLYKDGKGEGALCCVL 192

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRS D+ LG+PFNIAS  LLT+M+A V G + GEF  T+GD + Y +  +   +QL R+
Sbjct: 193 YQRSCDMGLGVPFNIASSRLLTIMIAHVCGLEPGEFRDTMGDENGYADREDTLKVQLERA 252

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR LP   IN  + D+  F+ EDF    ++PH  I    +V
Sbjct: 253 PRELPTAKINRQVDDIDDFKSEDFKRVGHDPHPGIKMNPAV 293


>gi|323934213|gb|EGB30637.1| thymidylate synthase [Escherichia coli E1520]
          Length = 363

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 154/349 (44%), Gaps = 88/349 (25%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           Y  ++  V+K G    DRTG GT ST      + L+ G  PL++ K V+ K ++ EL W+
Sbjct: 15  YAKVIETVLKSGVQADDRTGTGTLSTCYVPSYYMLTGGTVPLISGKAVNLKPLLVELEWY 74

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----------------- 105
           L+G  N+ +L  +GV IWD WAD++G+LGP+YG QWR W D                   
Sbjct: 75  LKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRWEDTRIVSHSEYLSKIATFRER 134

Query: 106 -----------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
                               IDQ+  IV +LR +P  RR +++AWNV  ++ M LPPCH 
Sbjct: 135 GYKVEGYLGISEDRVVLSREIDQLQRIVDTLRTNPTDRRIMLNAWNVGELEDMKLPPCHF 194

Query: 149 LFQFY---------------------------------------------------VDNG 157
           +F  +                                                   +   
Sbjct: 195 VFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLYDLEMDGSVTEAELDELGIPKR 254

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
            L+  L QRS D F+G+PFNIA Y +LT  LA + G   G F+H   DVHLYNNH E   
Sbjct: 255 ILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMAGAFVHFGFDVHLYNNHMEGVC 314

Query: 218 LQLSRS--PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             + R     + P +I      +L  F++++  +  Y+P   I   V+V
Sbjct: 315 ELMKRQAPEHSDPVVIFPHEWSELDDFKWDEVLILGYDPLPWIKVPVAV 363


>gi|291244011|ref|XP_002741893.1| PREDICTED: thymidylate synthase-like [Saccoglossus kowalevskii]
          Length = 207

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 85/251 (33%), Positives = 121/251 (48%), Gaps = 69/251 (27%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD-------- 85
           +RFD+   FPLLTTK+V W+ V  EL+WF++G +N   L    V IWD            
Sbjct: 6   LRFDMPDQFPLLTTKRVFWRGVAEELIWFIKGSTNAKELSDKNVHIWDANGSREFLDSRG 65

Query: 86  ----KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
               ++G+LGP+YG QWR +         DY    IDQ+++++++++ +P+ RR I++AW
Sbjct: 66  LQEREEGDLGPVYGFQWRHFGAQYKDMHSDYSNQGIDQLANVIETIKTNPHDRRIIMTAW 125

Query: 134 NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG 193
           N   + KMALPPCH   QFYV N +LSCQLYQRS D+                       
Sbjct: 126 NPTDLPKMALPPCHAFVQFYVCNDELSCQLYQRSADMIQR-------------------- 165

Query: 194 FQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYE 253
                                        +PR  P++ I   I ++  FRYEDF L  Y 
Sbjct: 166 -----------------------------TPRPFPKLHIKRKIENIDDFRYEDFELEGYS 196

Query: 254 PHAAILAKVSV 264
           PH  I   ++V
Sbjct: 197 PHPKIPMDMAV 207


>gi|6681717|gb|AAF23264.1|AF124982_1 thymidylate synthase [Haloferax volcanii]
          Length = 342

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 105/331 (31%), Positives = 149/331 (45%), Gaps = 78/331 (23%)

Query: 6   DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV---HWKSVVHELLWF 62
           DL+  V   G  + +RTGV T S F      DL +GFPLLTTK +    W S++HELLW+
Sbjct: 16  DLVTDVFGTGRHKPNRTGVDTISGFSKHYTVDLQEGFPLLTTKDLSGFRWNSLIHELLWY 75

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP------------------DY 104
             G+ ++  L      IWD WAD++G L   YG  WR +P                    
Sbjct: 76  FSGEEHIRTLREE-TGIWDAWADEEGHLDTAYGRFWRRYPVPEEGLAGEAWPDDGHRWMN 134

Query: 105 DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLY 164
           D    DQ++ ++ +L  +P SRR +++AW+ A      LPPCH  F F V   +L+  L 
Sbjct: 135 DEGTFDQLAYVLDTLDENPNSRRLVINAWHPANAAVSTLPPCHYTFVFNVQGDELNLHLT 194

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN-------------- 210
           QRSGD+ LG+PFN+A+Y++L  ++A   GF+ G F HT+ D H+Y               
Sbjct: 195 QRSGDIALGVPFNLAAYAILAQVVAQRAGFELGSFAHTIVDAHVYCGAGERGAWYGDHLD 254

Query: 211 ------------------------------------NHFEQADLQLSRSPRTLPQMIINP 234
                                               +H     LQ SR PR  P +    
Sbjct: 255 ELQSRLADVQSPDEYLDVREWLLDAAPEEADGEEDYDHVPGLLLQASREPRERPAL---- 310

Query: 235 NIVD--LLSFRYEDFTLRSYEPHAAILAKVS 263
           ++ D  L    +ED  LR Y+P   I   V+
Sbjct: 311 DVADVPLEDLSFEDIVLRDYDPADGIRFAVA 341


>gi|260495617|ref|ZP_05815741.1| thymidylate synthase [Fusobacterium sp. 3_1_33]
 gi|260196800|gb|EEW94323.1| thymidylate synthase [Fusobacterium sp. 3_1_33]
          Length = 275

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54
           Y D++  + + G   +        D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKDIVDTIAEKGIWSKGNVRTKYADGTAAYYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      ++V  L + G   WDEW  +DG +G  YG Q             Q+ 
Sbjct: 69  PIRELYWIWILQSNDVDVLDKLGCKFWDEWKMQDGTIGKAYGYQ---IAQETFGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELKNNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  E I  + ++H+Y+ H+++   Q++R      ++ IN
Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  +  Y+    +  +V++
Sbjct: 246 -NFKSIFDFKPDDVEILDYKYGEKVSYEVAI 275


>gi|237745327|ref|ZP_04575808.1| thymidylate synthase [Fusobacterium sp. 7_1]
 gi|229432556|gb|EEO42768.1| thymidylate synthase [Fusobacterium sp. 7_1]
          Length = 275

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 74/271 (27%), Positives = 129/271 (47%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54
           Y +++  + + G   +        D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKNIVDTIAEKGIWSKGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      ++V  L + G   WDEW  +DG +G  YG Q             Q+ 
Sbjct: 69  PIRELYWIWILQSNDVDVLDKLGCKFWDEWKMQDGTIGKAYGYQ---IAQETFGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELKNNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  E I  + ++H+Y+ H+++   Q++R      ++ IN
Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNMHIYDRHYDKLIEQVNRETFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  + +Y     +  +V++
Sbjct: 246 -NFKSIFDFKPDDIEIINYRYGEKVSYEVAI 275


>gi|254302644|ref|ZP_04970002.1| thymidylate synthase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322836|gb|EDK88086.1| thymidylate synthase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 275

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54
           Y D++  + + G            D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKDIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      +NV  L + G   WDEW  +DG +G  YG Q             Q+ 
Sbjct: 69  PIRELYWIWILQSNNVDVLDKLGCKFWDEWKMQDGTIGKAYGYQ---IAQETFGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELKKNPNSRRIMTEIWIPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A   G +  E I  + +VH+Y+ H+++   Q++       ++ IN
Sbjct: 186 LVANVFQYSVLHKLVALECGLEPAEIIWNIHNVHIYDRHYDKLIKQVNGETFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  +  Y+    +  +V++
Sbjct: 246 -NFKSIFDFKPDDIEILDYKYGEKVSYEVAI 275


>gi|253582886|ref|ZP_04860104.1| thymidylate synthase [Fusobacterium varium ATCC 27725]
 gi|251835092|gb|EES63635.1| thymidylate synthase [Fusobacterium varium ATCC 27725]
          Length = 276

 Score =  218 bits (555), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 79/271 (29%), Positives = 122/271 (45%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54
           Y +++  + K G            D T    +S  GYQ R D S     L+TT+    K+
Sbjct: 10  YKEIVEIIDKNGIWSEGNVRTKYADGTPAHYKSYIGYQFRLDNSTDEAHLITTRFAPNKA 69

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W     SN V  L++     WDEW   DG +G  YG Q             Q+ 
Sbjct: 70  PIRELYWIWIMQSNDVDELNKLKCKFWDEWKMNDGTIGKAYGYQ---IAKQTFGYKSQLD 126

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    +DKMAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 127 YVIGELKKNPNSRRIMTEIWVPEDLDKMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 186

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  YS+L  ++A     +  E I  + +VH+Y+ H      Q+ R       + I 
Sbjct: 187 LVANVFQYSILHKLVAMECNLEPAEIIWNIHNVHIYDRHMPDLLEQIKRPSIDGATVKI- 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  + +Y+    I  +V++
Sbjct: 246 ENFKSIYDFKPDDVVVENYQYGEKISYEVAI 276


>gi|332975724|gb|EGK12607.1| thymidylate synthase [Psychrobacter sp. 1501(2011)]
          Length = 211

 Score =  218 bits (555), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 104/190 (54%), Positives = 135/190 (71%), Gaps = 16/190 (8%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL+R+V   G+++ DRTG GTRS FG Q+RFDLS GFPLLTTKKVH KS+ +EL WFL
Sbjct: 11  YLDLIRYVRDHGTEKGDRTGTGTRSHFGAQLRFDLSDGFPLLTTKKVHMKSITYELFWFL 70

Query: 64  RGDSNVSYLHRHGVSIWDEWAD---------KDGELGPIYGVQWRSW-------PDYDGN 107
           +GD++V YL  +GV IW+EW+           +GELGPIYG QWR++         Y+ +
Sbjct: 71  KGDTHVKYLQDNGVRIWNEWSTAEQTARFGRPEGELGPIYGHQWRNYGASKKPDGSYNQD 130

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQI  +++ ++ +P SRR IVS WN A   ++ALPPCH LFQF+V +GKLSCQLYQRS
Sbjct: 131 GVDQIVEVIEQIKNNPNSRRLIVSGWNPAEATQVALPPCHTLFQFFVADGKLSCQLYQRS 190

Query: 168 GDVFLGIPFN 177
            D+FL  P N
Sbjct: 191 ADLFLLYPHN 200


>gi|329939291|ref|ZP_08288627.1| Thymidylate synthase [Streptomyces griseoaurantiacus M045]
 gi|329301520|gb|EGG45414.1| Thymidylate synthase [Streptomyces griseoaurantiacus M045]
          Length = 298

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/285 (31%), Positives = 131/285 (45%), Gaps = 23/285 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV--HWKSVVHEL 59
            QY  +L  +++ G     R G    +     M FDL+ GFP++T + +   W+  + EL
Sbjct: 13  EQYRRILGAILESGIPVPTRQGPEALTLMQQTMSFDLANGFPVITERSLARFWRKPIGEL 72

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK---------DGELGP-IYGVQWRSWPDYDGNVI 109
             F+ G   +  L   G   W  WA +          G+LGP  YG  +  +P  +G   
Sbjct: 73  CAFINGARTLDALAEFGCDWWGPWASEGKTSRRGLPPGDLGPGSYGGAFHDFPTAEGPGF 132

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNV-------ALIDKMALPPCHCLFQFYVDNGKLSCQ 162
           DQ   +V+ LR  P  R H VS W             K  + PCH      V  GKL   
Sbjct: 133 DQFRHLVEQLRELPGDRTHFVSPWIPQYQVRGEGKTPKTTISPCHGWVHVRVLGGKLHLH 192

Query: 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           ++QRSGDV +G+P N+  Y+ L +ML  + G     + HT+ D H+Y +  ++    L R
Sbjct: 193 MFQRSGDVPVGVPSNMIQYAALLLMLEHLTGIPAARYYHTISDAHVYADQVDRVRGMLDR 252

Query: 223 SPRTLPQMIIN---PNIVDLLSFRYEDFTLRSYEPHAAI-LAKVS 263
            PR LP + +N     + D+  FR E F L  Y+PH AI    V+
Sbjct: 253 EPRRLPTVTLNESGRRVKDIHDFRPEHFDLADYDPHPAIGSIPVA 297


>gi|304415491|ref|ZP_07396130.1| thymidylate synthase [Candidatus Regiella insecticola LSR1]
 gi|304282650|gb|EFL91174.1| thymidylate synthase [Candidatus Regiella insecticola LSR1]
          Length = 155

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 83/155 (53%), Positives = 115/155 (74%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL L++ V++ G+ ++DRTG GT S FG+QMRF+L  GFPL+TTK+ + K+++HELL
Sbjct: 1   MQQYLALMKKVLEEGTTKKDRTGTGTLSIFGHQMRFNLQNGFPLVTTKRCYTKAIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YL  + V+IW+EW D+ G+LGP+YG QWRSW   DG  IDQ+  +V  ++
Sbjct: 61  WFLKGDTNIAYLKENDVTIWNEWVDEQGDLGPVYGKQWRSWGTADGRHIDQLDLLVNEIK 120

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD 155
            +P SRR +VSAWNV  +DKMAL PCH  F     
Sbjct: 121 KNPDSRRLVVSAWNVGELDKMALAPCHAFFSILCR 155


>gi|262067031|ref|ZP_06026643.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693]
 gi|291379240|gb|EFE86758.1| thymidylate synthase [Fusobacterium periodonticum ATCC 33693]
          Length = 275

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54
           Y +++  + + G            D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKEIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSGDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      +NV+ L+  G   WDEW  +DG +G  YG Q             Q+ 
Sbjct: 69  PIRELYWIWILQSNNVNILNDLGCKFWDEWKQEDGTIGKAYGYQ---IAQETYGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELKKNPNSRRIMTEIWVPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  Y++L  ++A   G +  + I  + ++H+Y+ H+++   Q++       ++ IN
Sbjct: 186 LVANVFQYAVLHKLVALECGLEAADIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  +  Y+    +  +V++
Sbjct: 246 -NFKSIFDFKPDDVEIVDYKYGEKVSYEVAI 275


>gi|237739981|ref|ZP_04570462.1| thymidylate synthase [Fusobacterium sp. 2_1_31]
 gi|229421998|gb|EEO37045.1| thymidylate synthase [Fusobacterium sp. 2_1_31]
          Length = 275

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLSKGFP-LLTTKKVHWKS 54
           Y +++  + + G            D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKEIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSDDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      +NV+ L+  G   WDEW  +DG +G  YG Q             Q+ 
Sbjct: 69  AIRELYWIWILQSNNVNVLNDLGCKFWDEWKQEDGTIGKAYGYQ---IAQETYGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  LR +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELRKNPNSRRIMTEIWVPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  Y++L  ++A   G +  + I  + ++H+Y+ H+++   Q++       ++ IN
Sbjct: 186 LVANVFQYAVLHKLVALECGLEAADIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  +  Y+    +  +V++
Sbjct: 246 -NFKSIFDFKPDDVEIVDYKYGEKVNYEVAI 275


>gi|294782923|ref|ZP_06748249.1| thymidylate synthase [Fusobacterium sp. 1_1_41FAA]
 gi|294481564|gb|EFG29339.1| thymidylate synthase [Fusobacterium sp. 1_1_41FAA]
          Length = 275

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 14/271 (5%)

Query: 4   YLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKS 54
           Y +++  + + G            D T    +S  GYQ R D S     L+T++    K+
Sbjct: 9   YKEIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSGDEAHLITSRFAPSKA 68

Query: 55  VVHELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + EL W      +NV  L+  G   WDEW  +DG +G  YG Q             Q+ 
Sbjct: 69  AIRELYWIWILQSNNVDVLNDLGCKFWDEWKQEDGTIGKAYGYQ---IAQETYGQKSQLH 125

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            ++  L+ +P SRR +   W    + +MAL PC  L Q+ V   KL  ++ QRS DV LG
Sbjct: 126 YVINELKKNPNSRRIMTEIWVPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSCDVALG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +  N+  Y++L  ++A   G +  + I  + ++H+Y+ H+++   Q++       ++ IN
Sbjct: 186 LVANVFQYAVLHKLVALECGLEAADIIWNIHNMHIYDRHYDKLIKQVNGETFEPAKIKIN 245

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            N   +  F+ +D  +  Y+    +  +V++
Sbjct: 246 -NFKSIFDFKPDDVEIVDYKYGEKVNYEVAI 275


>gi|255025022|ref|ZP_05297008.1| thymidylate synthase [Listeria monocytogenes FSL J1-208]
          Length = 159

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 89/159 (55%), Positives = 113/159 (71%)

Query: 91  GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150
           G IYG QWR W    G  IDQ++ +++ ++ +P SRR IVSAWN   I  MALPPCH LF
Sbjct: 1   GNIYGKQWREWKTSQGETIDQLADLIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLF 60

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYN 210
           QFYV +GKLSCQLYQRS D+FLG+PFNIASY+LLT ++A  +G   GEFIHT+GD HLYN
Sbjct: 61  QFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAREVGLDVGEFIHTMGDAHLYN 120

Query: 211 NHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
           NH EQ   QLSR+P  LP+++++     +  F   D +L
Sbjct: 121 NHIEQVKEQLSRTPHKLPKLVLSDKPATIFDFDVADISL 159


>gi|153840318|ref|ZP_01992985.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810]
 gi|149746021|gb|EDM57151.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810]
          Length = 255

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 111/243 (45%), Gaps = 17/243 (6%)

Query: 39  SKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD------------K 86
           +  FPL+TT+K  WK+ V ELL ++RG  N     + G   WD  A+             
Sbjct: 13  NNQFPLVTTRKSFWKAAVAELLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKG 72

Query: 87  DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           + ++G +YGVQ R+W   DG  IDQ+  IV  L      R  I++ +N        L PC
Sbjct: 73  EDDMGRVYGVQGRAWAKPDGGHIDQLRKIVDDLTRGVDDRGEILNFYNPGEFHMGCLRPC 132

Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206
                F + +  L     QRS DV LG+ FN+    +   ++A + G + G+  H + + 
Sbjct: 133 MYSHHFSLLDDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQAFHKIVNA 192

Query: 207 HLYNNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAK 261
           H+Y +  E   D+QL R P   P   INP I  L         +DF +  YE H  I   
Sbjct: 193 HIYEDQLELMRDVQLKREPLQAPTFHINPEIKSLEDLETWVTLDDFWVEGYEHHDPIRYP 252

Query: 262 VSV 264
            SV
Sbjct: 253 FSV 255


>gi|294917252|ref|XP_002778435.1| dihydrofolate reductase/thymidilate synthase, putative [Perkinsus
           marinus ATCC 50983]
 gi|239886828|gb|EER10230.1| dihydrofolate reductase/thymidilate synthase, putative [Perkinsus
           marinus ATCC 50983]
          Length = 422

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 92/203 (45%), Positives = 126/203 (62%), Gaps = 23/203 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           ++YL L+  +I+ G D  DRTGVGT++ F   MRF L  G FPLLTTK+V W+ VV ELL
Sbjct: 207 YEYLRLIEEIIENGEDADDRTGVGTKTIFSCHMRFSLRDGVFPLLTTKRVFWRGVVEELL 266

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWPDY---- 104
           WF+RGD+N  +L   GV IWD                ++G+LGP+YG QWR +       
Sbjct: 267 WFIRGDTNAKHLSDQGVKIWDLNGTREFLDGRGLTHREEGDLGPVYGFQWRHFGADYVDM 326

Query: 105 -----DGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGK 158
                    +DQ++ +++ L+ +P  RR I++AWN   +  MALPPCH + QFYV+   +
Sbjct: 327 HADYSQSGGVDQLAEVIRQLKENPMDRRIIMTAWNPTALPLMALPPCHMMCQFYVNSKQE 386

Query: 159 LSCQLYQRSGDVFLGIPFNIASY 181
           LSC +YQRS D+ LG+PFNIASY
Sbjct: 387 LSCAMYQRSADMGLGVPFNIASY 409


>gi|4378161|gb|AAD19406.1| thymidylate synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 261

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 99/267 (37%), Positives = 140/267 (52%), Gaps = 41/267 (15%)

Query: 33  QMRFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWA------- 84
            MRFDLSKG  P+LTTKKV ++  + E+LWFL GD+N+  L   GVSIW +W        
Sbjct: 1   MMRFDLSKGRIPILTTKKVSYRLAIREMLWFLSGDTNIRPLVEQGVSIWSDWPLARYQAE 60

Query: 85  ---------------------DKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
                                 K G+LGP+YG QWR W   DG V DQI++++++L+++P
Sbjct: 61  TGALLSKKEFEAKILADTEFAKKWGDLGPVYGRQWRRWQGSDGQVYDQIATLIETLKSNP 120

Query: 124 YSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSGDVFLGIPFNIASYS 182
            SRR +   WNVA +  MALPPCH ++Q++V  +G+L+  LYQRS DVFLG  F      
Sbjct: 121 SSRRMLFHGWNVAELKDMALPPCHMVYQYHVTSDGRLNSLLYQRSADVFLGAAFQFGRRG 180

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
            L  MLA   G   G+ + T GDVH+Y NH +Q    L        ++ +  +   +  +
Sbjct: 181 RLQAMLADQAGLALGDLVWTGGDVHIYRNHIDQMKNSLP-VTSGFSRLELTRHPNSITDY 239

Query: 243 R-----YEDFTLRSYEPHAAILAKVSV 264
           +      +D  L        I   V+V
Sbjct: 240 KSRILRLQDMILI-----PPIKGAVAV 261


>gi|297821349|ref|XP_002878557.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297324396|gb|EFH54816.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 490

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 138/262 (52%), Gaps = 22/262 (8%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL+L++++I  G    +     T + FG QMRF+L K FPLLTTKKV W  VV E+L  +
Sbjct: 236 YLNLIQNIISSGDMNDN----NTLTKFGCQMRFNLRKTFPLLTTKKVFWLGVVEEILQLI 291

Query: 64  RGDSNVSYLHRHGVSIWD-------------EWADKDGELGPIYGVQWRSW-PDYDGNVI 109
            G  N       G +IWD                ++DG+   +YG+QW+           
Sbjct: 292 SGSINP---MEKGSNIWDSDEANEYLNSFGVNATEEDGDHQHLYGLQWKHTDARLIVQKF 348

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
            Q+S ++  ++ +P+++R ++SA N + + K+++ PC    QFYV NG+LS Q+YQ S +
Sbjct: 349 SQLSDVINKIKNNPHNQRIMLSACNPSDL-KLSVSPCQTFAQFYVANGELSSQIYQSSTE 407

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
             + IPF+I +YSLLT ++A V     G+FI+ +G   +     +    QL  SP+  P 
Sbjct: 408 ASIEIPFSITTYSLLTCIIAHVCDLVAGDFIYVIGQARINKARVKAIQKQLQISPKPFPI 467

Query: 230 MIINPNIVDLLSFRYEDFTLRS 251
           + INP    + +F   D  L  
Sbjct: 468 LKINPEKKKMDNFEASDLELLG 489


>gi|124262681|ref|YP_001023151.1| thymidylate synthase [Methylibium petroleiphilum PM1]
 gi|124261927|gb|ABM96916.1| thymidylate synthase [Methylibium petroleiphilum PM1]
          Length = 316

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 81/316 (25%), Positives = 136/316 (43%), Gaps = 56/316 (17%)

Query: 1   MHQYLDLLRHVIKFGSDR-RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHEL 59
           M Q+ D+L+H++  GS +   RTG       GY +RFD++ GFP +TTK++ +K    EL
Sbjct: 1   MQQFHDMLQHILDHGSRQLNARTGEEVLFVPGYTLRFDMADGFPAITTKQLFFKMAKGEL 60

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDG- 106
             F RG ++ +     G ++W++ A+K            + +LG    +QW  W D+   
Sbjct: 61  FGFFRGFTSAAQFREIGCTVWNDNANKTKAWLANPYRQGEDDLGRFGYLQWTDWRDWREA 120

Query: 107 -----------------------------NVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
                                          I+Q+ + + ++  +P  R  I+S WN A 
Sbjct: 121 TTPAQRDEMLAQGYEVRAHDAERGVWILRRSINQLETSLHAVMTNPSDRGIILSGWNPAE 180

Query: 138 IDKMALPPCH--CLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
           ID+ AL  CH   + Q  V  G L   L+QRS D  L   +N+A  ++   ++A + G +
Sbjct: 181 IDQGALRSCHVSYMLQVDVATGTLHLTLWQRSFDAPLA--YNVAIGAMYLEIMARLAGLK 238

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP--------NIVDLL-SFRYED 246
            G F H + D H+Y  H       L+R     P + +           I  +  +     
Sbjct: 239 AGTFTHFISDAHIYAKHIPGVKEMLAREHFPQPTLDLGNIPTLTSAAEIPGIFATLDPNQ 298

Query: 247 FTLRSYEPHAAILAKV 262
             L +Y+ H  I  ++
Sbjct: 299 VKLVNYQHHPKIAFEM 314


>gi|330004215|ref|ZP_08304841.1| thymidylate synthase [Klebsiella sp. MS 92-3]
 gi|328536732|gb|EGF63053.1| thymidylate synthase [Klebsiella sp. MS 92-3]
          Length = 363

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 144/349 (41%), Gaps = 88/349 (25%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVHELLWF 62
           Y  +L      G    +RTG  T  T     ++ L     PL+++K V+ K ++ EL W+
Sbjct: 15  YACVLAEAASSGIKSDNRTGTPTIGTCYVNSQYPLWGAAVPLISSKAVNLKPLLVELEWY 74

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD----------------- 105
           L+G  +V++L  H V IW+ W  +DG LGP+YG QWR W D                   
Sbjct: 75  LKGTGDVAFLREHDVKIWEAWTREDGTLGPVYGKQWRRWNDTRIVDRYDFVKNYQSYLYR 134

Query: 106 -----------------GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
                               IDQ+  IV  LR DP  RR ++SAWNV  ++ MALPPCH 
Sbjct: 135 GYKTEGYIGVEEDRVVLSREIDQLQRIVDKLRRDPTDRRIMMSAWNVGELEDMALPPCHF 194

Query: 149 LFQFY------------------VDNGKLSCQLY-------------------------- 164
           ++  +                  V    L    Y                          
Sbjct: 195 MYHVWSRELGFEERLRQANAIGEVHAKYLHESRYTALLAEIARCGEASEEMLDSLNIPRR 254

Query: 165 -------QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
                  QRS DVF+G+PFNIA Y +LT ++A V       F H   DVH+Y NH    +
Sbjct: 255 ALCSAMIQRSVDVFVGMPFNIAGYGILTSLIAQVTNHMPMMFSHFGLDVHVYENHMSGVN 314

Query: 218 LQLSRS-PRTLPQMIINPN-IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
             + R  P     ++I P    ++  FR++D  +  Y PH  I   V+V
Sbjct: 315 EMMDRDIPENSDPVVIFPESWKEIDDFRWQDVRIEGYAPHPWIKVPVAV 363


>gi|158079499|ref|YP_001504312.1| putative thymidylate synthase [Enterococcus phage phiEF24C]
 gi|157890343|dbj|BAF81471.1| putative thymidylate synthase [Enterococcus phage phiEF24C]
          Length = 315

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/309 (26%), Positives = 135/309 (43%), Gaps = 48/309 (15%)

Query: 4   YLDLLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
           Y DL+  +IK G             D T   T+   G         G PLL +K V  K 
Sbjct: 7   YKDLVMDIIKNGVTELPEGTRAVYADGTPATTKFIEGVNFTITPDMGAPLLRSKHVGIKW 66

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY--------- 104
            + EL W  +  SN VS+L   GV+IWDEW  +DG +G  YG    +   +         
Sbjct: 67  ALTELQWIWQEMSNEVSWLKERGVTIWDEWEQEDGTIGKAYGYALFNKERFIPVYSGDVE 126

Query: 105 -----------------DGNVI----------DQISSIVQSLRADPYSRRHIVSAWNVAL 137
                             G  I          +Q+ ++++ L++ P SRR + + WNV  
Sbjct: 127 LAKNRKAGSLIPKVVPKKGGWIAGTHQPYLKLNQVEAVIEQLKSTPNSRRIMTTLWNVED 186

Query: 138 IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYG 197
           +  M+L PC     + V  GKL+  +  RS DV LG+PFNI  Y  L +++A+ +G + G
Sbjct: 187 LYDMSLEPCVWTTHWTVVEGKLNLHVKARSSDVCLGLPFNIIQYHALQLVMANTVGLELG 246

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRS-PRTLPQMIIN-PNIVDLLSFRYEDFTLRSYEPH 255
               T  + H+Y  H E  + Q++   P  +P++++      +       D ++ +Y+ +
Sbjct: 247 NLYWTSDNAHIYERHLELVEKQVNEPIPEEVPKLVLPWKKGTNFFDSPLSDISVINYKHN 306

Query: 256 AAILAKVSV 264
                +V++
Sbjct: 307 GKFNYEVAI 315


>gi|225377246|ref|ZP_03754467.1| hypothetical protein ROSEINA2194_02892 [Roseburia inulinivorans DSM
           16841]
 gi|225210950|gb|EEG93304.1| hypothetical protein ROSEINA2194_02892 [Roseburia inulinivorans DSM
           16841]
          Length = 265

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 23/258 (8%)

Query: 6   DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           D+ + +++ G+            D T   T   FG   R+DLSK FP +T +K   K+  
Sbjct: 10  DMCKDILENGTSTEGEKVRPHWEDGTSAYTIKKFGVVNRYDLSKEFPAITLRKTAIKTCT 69

Query: 57  HELLWFLR-GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
            E+LW  +   +N+  L     ++WDEWAD+DG +G  YG Q      Y   ++DQ+  +
Sbjct: 70  EEMLWIWQRKSNNIHDL---NSTVWDEWADEDGSIGKAYGYQLGVKHQYKEGMMDQVDRV 126

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK------LSCQLYQRSGD 169
           +  L+ +P+SRR + + +    + +M L PC     F V + +      L+  L QRS D
Sbjct: 127 IYDLKHNPFSRRIMTNIYVHQDLHEMNLYPCAYSMTFNVTHKEGDEKLTLNAILNQRSQD 186

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           V     +N+  Y++L  MLA V   Q GE +H + D H+Y+ H       + R      +
Sbjct: 187 VLAANNWNVCQYAVLMHMLAQVCDMQVGELVHVIADAHIYDRHIPIIKELIGREASGA-K 245

Query: 230 MIINP---NIVDLLSFRY 244
           + I P     + +   RY
Sbjct: 246 IHIKPGNQRFLSVYDKRY 263


>gi|224158660|ref|XP_002191045.1| PREDICTED: similar to thymidylate synthase, partial [Taeniopygia
           guttata]
          Length = 157

 Score =  205 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 75/161 (46%), Positives = 101/161 (62%), Gaps = 4/161 (2%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           Y    +DQ+  ++++++ +P  RR I+ AWN   I  MALPPCH L QFYV NG+LSCQL
Sbjct: 1   YSNQGVDQLQKVIETIKTNPDDRRIIMCAWNPKDISLMALPPCHALCQFYVLNGELSCQL 60

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           YQRSGD+ LG+PFNIASYSLLT M+A V G + G  I  +  + LY         QL R 
Sbjct: 61  YQRSGDMGLGVPFNIASYSLLTYMIAHVTGLKVGYLI--ILFILLYT--VSLLLFQLQRE 116

Query: 224 PRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           PR  P++ I   I D+ +F+ EDF +  Y PH  I  +++V
Sbjct: 117 PRPFPKLKILREIKDISNFKAEDFQIEDYNPHPPIKMEMAV 157


>gi|119622123|gb|EAX01718.1| thymidylate synthetase, isoform CRA_c [Homo sapiens]
          Length = 135

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 71/135 (52%), Positives = 92/135 (68%)

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           + AWN   +  MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A
Sbjct: 1   MCAWNPRDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIA 60

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTL 249
            + G + G+FIHTLGD H+Y NH E   +QL R PR  P++ I   +  +  F+ EDF +
Sbjct: 61  HITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQI 120

Query: 250 RSYEPHAAILAKVSV 264
             Y PH  I  +++V
Sbjct: 121 EGYNPHPTIKMEMAV 135


>gi|229138943|ref|ZP_04267522.1| Thymidylate synthase [Bacillus cereus BDRD-ST26]
 gi|228644568|gb|EEL00821.1| Thymidylate synthase [Bacillus cereus BDRD-ST26]
          Length = 124

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 77/124 (62%), Positives = 96/124 (77%)

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
           MALPPCH LFQFYV +GKLSCQLYQRSGD+FLGIPFNIASYSLLT ++A   G + GEF+
Sbjct: 1   MALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFV 60

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260
           HT+GD H+Y NHFEQ + QL+R PR  P++ +NP++  +  F  ED T+  Y+PH AI A
Sbjct: 61  HTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKA 120

Query: 261 KVSV 264
            V+V
Sbjct: 121 PVAV 124


>gi|256545413|ref|ZP_05472775.1| thymidylate synthase [Anaerococcus vaginalis ATCC 51170]
 gi|256398809|gb|EEU12424.1| thymidylate synthase [Anaerococcus vaginalis ATCC 51170]
          Length = 287

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 21/273 (7%)

Query: 2   HQYLDLLRHVIKFGSDRR-----------DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV 50
            +Y+ + + +++ G D             D     T+      +R++  +  PL++ +K+
Sbjct: 5   EKYIKIAKEILEKGYDEEELNKEVRPVWDDGESAYTKYLPQQVVRYEKGE-LPLISLRKI 63

Query: 51  HWKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSWPD--YDG 106
            WKS + E+LW  +  SN   L   ++ V+ WD W ++DG LG  YG Q          G
Sbjct: 64  AWKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNEDGNLGTAYGYQINKKFKSPETG 123

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
            + +QI  ++  ++ +P +RR I++  +V  +  M L PC  L  + V    L+  L QR
Sbjct: 124 QMTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGEYLNLTLVQR 183

Query: 167 SGDVFLGI---PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--S 221
           SGD          N   Y +L  M+A V G++ G+F+H + + H+Y  H       L   
Sbjct: 184 SGDFLAAAAPGGINAFQYYVLLRMVAQVTGYKAGDFVHFIQNYHIYKKHIPSVKKILEIK 243

Query: 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
              ++ P++ INP+I +   F  +DF L  Y P
Sbjct: 244 VDEKSKPRLEINPDIKEFKDFTIDDFKLIDYYP 276


>gi|324514855|gb|ADY46009.1| Thymidylate synthase [Ascaris suum]
          Length = 195

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 90/194 (46%), Positives = 121/194 (62%), Gaps = 22/194 (11%)

Query: 1   MH-QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M  +YL  ++H+I  G    DRTGVGT S FG    + L  G  PLLTTK+V+WK VV E
Sbjct: 1   MRGKYLRQIKHIIDEGDKVIDRTGVGTLSLFGLHSTYSLRNGVIPLLTTKRVYWKGVVEE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP---- 102
           LLWF++GD++   L   GV IWD    ++            G+LGPIYG QWR +     
Sbjct: 61  LLWFIKGDTDAKRLSAKGVKIWDANGSREFLDSQGFKDRPEGDLGPIYGFQWRHFGAEYH 120

Query: 103 ----DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGK 158
               DY G  +DQ++ +++ ++ +P SRR I++AWNV  + +MALPPCH L QF V NG+
Sbjct: 121 GTDADYKGQGVDQLADVIEQIKNNPNSRRIILNAWNVKDLHQMALPPCHTLAQFAVRNGE 180

Query: 159 LSCQLYQRSGDVFL 172
           LSCQLYQRSGD+ +
Sbjct: 181 LSCQLYQRSGDMVI 194


>gi|325847871|ref|ZP_08170093.1| thymidylate synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480889|gb|EGC83942.1| thymidylate synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 288

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 19/272 (6%)

Query: 2   HQYLDLLRHVIKFGSDRRD---------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51
            +Y+++ +++++ G D              G    + F  Q      KG  PL++ +K+ 
Sbjct: 6   KKYIEIAKNILENGYDEEKLNHEVRAVWEDGESAYTKFLPQEIVRYEKGEVPLISLRKIA 65

Query: 52  WKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSWPD--YDGN 107
           WKS + E+LW  +  SN   L   ++ V+ WD W + +G LG  YG Q          GN
Sbjct: 66  WKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNDEGNLGTAYGYQINKKFKSPETGN 125

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
           + +QI  ++  ++ +P +RR I++  +V  +  M L PC  L  + V    L+  L QRS
Sbjct: 126 MTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGDYLNLTLIQRS 185

Query: 168 GDVFLGI---PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SR 222
           GD          N   Y +L  M+A V G++ G+F+H + + H+Y  H       +    
Sbjct: 186 GDFLAAAAPGGINAFQYYVLLRMIAQVTGYKAGDFVHFIQNYHIYKKHIPIVKKIMEVKV 245

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
             ++ P++ INP+I D   F  +DF L  Y P
Sbjct: 246 DEKSRPRLEINPDIKDFKDFTIDDFKLLDYYP 277


>gi|307243541|ref|ZP_07525689.1| thymidylate synthase [Peptostreptococcus stomatis DSM 17678]
 gi|306493097|gb|EFM65102.1| thymidylate synthase [Peptostreptococcus stomatis DSM 17678]
          Length = 277

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 131/264 (49%), Gaps = 24/264 (9%)

Query: 7   LLRHVIKFGSDR---------RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVV 56
           L   ++  G++           D T   T        R+DLSKG  P++T ++V WKS +
Sbjct: 11  LCNDILNSGNNTLGEKVRPKYADGTPSHTMFVNQVFERYDLSKGELPIVTLRQVAWKSGI 70

Query: 57  HELLWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS 114
            E+LW  +  SN   L R  +G++ WDEW   D  +G  YG   + +   D         
Sbjct: 71  KEILWIYQDQSNNLDLLRDKYGITWWDEWDLGDRTIGQRYGATVKRYKLMD--------K 122

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
           ++++L+  PY RRHI++ +  A +++   L PC    Q+ V +G L   L QRS DV + 
Sbjct: 123 LLENLKNQPYGRRHIINLYQEADLEETAGLYPCAMETQWSVRDGYLDLTLIQRSSDVAVA 182

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP---RTLPQM 230
              N   Y  L MM+A  +G Q G F H + + H+Y+ H +Q    ++R P       ++
Sbjct: 183 NAINKIQYVALQMMVARHVGLQAGVFCHYVNNAHIYDRHIDQIKEMIARDPQEGHESVRL 242

Query: 231 IINPNIVDLLSFRYEDFTLRSYEP 254
           ++NP+  +   F  +DFT+ +Y+P
Sbjct: 243 VLNPDKTNFYDFTLDDFTMENYDP 266


>gi|242216400|ref|XP_002474008.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726873|gb|EED80809.1| predicted protein [Postia placenta Mad-698-R]
          Length = 203

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 22/192 (11%)

Query: 81  DEWADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
           ++   ++G+LGP+YG QWR +         DY G  +DQ++  ++ +R DP  RR I+SA
Sbjct: 26  EDQHRREGDLGPVYGFQWRHFGARYTDCDADYSGQGVDQLAECIRKIREDPTDRRIILSA 85

Query: 133 WNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI 192
           WN A                     +LSC LYQRS D+ LGIPFNIASY+LLT ++A + 
Sbjct: 86  WNPADAPD--------------APRRLSCLLYQRSADLGLGIPFNIASYALLTHLVAHLT 131

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSY 252
             +  E I  LGD H+Y +H +    QL R+PR  P +  N  + D+  F+ ED  +  Y
Sbjct: 132 QTEPHELIIQLGDAHVYRDHVDALKEQLERTPRPFPTLRWNRRVEDVDDFKAEDIAVEGY 191

Query: 253 EPHAAILAKVSV 264
           +P+  I  K+SV
Sbjct: 192 QPYPPIAMKMSV 203


>gi|212697068|ref|ZP_03305196.1| hypothetical protein ANHYDRO_01633 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675843|gb|EEB35450.1| hypothetical protein ANHYDRO_01633 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 288

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 19/272 (6%)

Query: 2   HQYLDLLRHVIKFGSDRRD---------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51
            +Y+++ +++++ G D              G    + F  Q      KG  PL++ +K+ 
Sbjct: 6   KKYIEIAKNILENGYDEEKLNHEVRAVWEDGESAYTKFLPQEIVRYEKGEVPLISLRKIA 65

Query: 52  WKSVVHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSWPD--YDGN 107
           WKS + E+LW  +  SN   L   ++ V+ WD W + +G LG  YG Q          GN
Sbjct: 66  WKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNDEGNLGTAYGYQVNKKFKSPETGN 125

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
           + +QI  ++  ++ +P +RR I++  +V  +  M L PC  L  + V    L+  L QRS
Sbjct: 126 MTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGDYLNLTLIQRS 185

Query: 168 GDVFLGI---PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL--SR 222
           GD          N   Y +L  M+A V G++ G+F+H + + H+Y  H       +    
Sbjct: 186 GDFLAAAAPGGINAFQYYVLLRMIAQVTGYKAGDFVHFIQNYHIYKKHIPIVKKIMEVKV 245

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
             ++ P + INP+I D   F  +DF L  Y P
Sbjct: 246 DEKSRPILEINPDIKDFKDFTIDDFNLVDYYP 277


>gi|38707853|ref|NP_944928.1| Thymidylate synthase [Enterobacteria phage Felix 01]
 gi|33340456|gb|AAQ14807.1| putative thymidylate synthase [Enterobacteria phage Felix 01]
          Length = 299

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 103/297 (34%), Positives = 148/297 (49%), Gaps = 33/297 (11%)

Query: 1   MHQ----YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           M Q    Y ++L HV+  G  R  RTG    +    Q RFD+  GFPLLT+K+V  + V+
Sbjct: 1   MSQADLSYKNILNHVLSVGELRTTRTGDVISAFAPPQFRFDMRTGFPLLTSKQVFTRQVI 60

Query: 57  HELLWFLRGDSNVSYLH-----RHGVSIWDEWADKDGEL----------------GPIYG 95
            E LWFL G++ +S L       +    W  W+D                     G IYG
Sbjct: 61  GEALWFLNGENKLSELRYRTWGENDGERWTIWSDDFKRWLSSNYSSEQDWLEDAGGRIYG 120

Query: 96  VQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFY 153
           VQWR++  ++G V+DQ+ ++V  ++ D   R  +V+AWN A I  + MAL PCH +FQ Y
Sbjct: 121 VQWRNFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVMFQIY 180

Query: 154 VDN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
           + N G++  Q YQRS D FLG+PFNIASY  +  +L  + G+     I   GD  +Y NH
Sbjct: 181 ITNEGEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQNH 240

Query: 213 FEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264
            +Q    ++      P   I      + DL      DF   + +Y+    I A +SV
Sbjct: 241 MKQVYELMNNEEFHAPTFEIGLPLNTLSDLKHLTASDFIGGINNYKHAGKIEAPLSV 297


>gi|269975303|gb|ACZ55527.1| thymidylate synthase [Staphylococcus phage SA1]
          Length = 299

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 103/297 (34%), Positives = 147/297 (49%), Gaps = 33/297 (11%)

Query: 1   MHQ----YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVV 56
           M Q    Y ++L HV+  G  R  RTG    +    Q RFD+  GFPLLT+K+V  + V+
Sbjct: 1   MSQADSSYKNILNHVLSVGELRTTRTGDVISAFAPPQFRFDMRTGFPLLTSKQVFTRQVI 60

Query: 57  HELLWFLRGDSNVSYLH-----RHGVSIWDEWADKDGEL----------------GPIYG 95
            E LWFL G++ +  L       +    W  W+D                     G IYG
Sbjct: 61  GEALWFLNGENKLGELRYRTWDENDGERWTIWSDDFKRWLSSNYSSEQDWLDDAGGRIYG 120

Query: 96  VQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQFY 153
           VQWR++  ++G V+DQ+ ++V  ++ D   R  +V+AWN A I  + MAL PCH LFQ Y
Sbjct: 121 VQWRNFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVLFQIY 180

Query: 154 VDN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
           + N G++  Q YQRS D FLG+PFNIASY  +  +L  + G+     I   GD  +Y NH
Sbjct: 181 ITNEGEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQNH 240

Query: 213 FEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264
            +Q    ++      P   I      + DL      DF   + +Y+    I A +SV
Sbjct: 241 MKQVYELMNNEEFHAPTFEIGIPLNTLSDLKHLTASDFIGGINNYQHAGKIEAPLSV 297


>gi|257451431|ref|ZP_05616730.1| thymidylate synthase [Fusobacterium sp. 3_1_5R]
 gi|257466896|ref|ZP_05631207.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918043|ref|ZP_07914283.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317058011|ref|ZP_07922496.1| thymidylate synthase [Fusobacterium sp. 3_1_5R]
 gi|313683687|gb|EFS20522.1| thymidylate synthase [Fusobacterium sp. 3_1_5R]
 gi|313691918|gb|EFS28753.1| thymidylate synthase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 272

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 17/274 (6%)

Query: 2   HQYLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHW 52
            +Y  L+ ++ + G            D T    +   GYQ R D S K   L+T++K  W
Sbjct: 5   EEYRKLVEYICEKGEMVEGKVRTVYADGTPAYYKQVVGYQFRLDNSGKEAFLITSRKAAW 64

Query: 53  KSVVHELLWFL-RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQ 111
           KS + EL W      +NV  L   G   W+EW  +DG +G  YG Q             Q
Sbjct: 65  KSSIRELYWIWYLQSNNVDELVDLGCKFWNEWKQEDGTIGKAYGYQ---IGKKTFQYKSQ 121

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           +  ++  ++ +P SRR +   W    +DKMAL PC  L Q+ V NGKL  ++ QRS DV 
Sbjct: 122 LDYVIGEIKNNPNSRRILTEIWVPEDLDKMALTPCVHLTQWTVLNGKLYLEVRQRSCDVA 181

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+  N+  Y +L  ++A       G+ I T+ + H+Y+ H E    Q+  +    P + 
Sbjct: 182 LGLVANVFQYQVLHKLVARECNLNCGDLIWTIHNAHIYDRHLEDLQKQVRETGTEKPILD 241

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAI-LAKVSV 264
           +    ++    +    T+ +Y+P       +V++
Sbjct: 242 LGEEGLENFHQK---VTIENYKPLENNYKYEVAI 272


>gi|119622124|gb|EAX01719.1| thymidylate synthetase, isoform CRA_d [Homo sapiens]
          Length = 208

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/128 (53%), Positives = 88/128 (68%)

Query: 137 LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196
            +  MALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + 
Sbjct: 81  DLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKP 140

Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHA 256
           G+FIHTLGD H+Y NH E   +QL R PR  P++ I   +  +  F+ EDF +  Y PH 
Sbjct: 141 GDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHP 200

Query: 257 AILAKVSV 264
            I  +++V
Sbjct: 201 TIKMEMAV 208


>gi|319946995|ref|ZP_08021229.1| thymidylate synthase [Streptococcus australis ATCC 700641]
 gi|319747043|gb|EFV99302.1| thymidylate synthase [Streptococcus australis ATCC 700641]
          Length = 279

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +R +++ G           D T   ++   G  M FDL+KG FP+ T + +  KS + E+
Sbjct: 12  IRRIMEEGVWSEQARPKYKDGTTANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKEM 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   + G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLELLNDKYQVHYWNDWEVGETGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEESEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFEIKAEDFVLEDYDPVKPQLKFDLAI 279


>gi|238801819|ref|YP_002922869.1| thymidylate synthase [Enterobacteria phage WV8]
 gi|216263032|gb|ACJ71900.1| thymidylate synthase [Enterobacteria phage WV8]
          Length = 299

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 104/298 (34%), Positives = 147/298 (49%), Gaps = 35/298 (11%)

Query: 1   MHQ----YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQ-MRFDLSKGFPLLTTKKVHWKSV 55
           M Q    Y ++L HV+  G  R  RTG    S F     RFD+  GFPLLT+K+V  + V
Sbjct: 1   MSQADSSYKNILNHVLSVGELRTTRTG-DVISAFAPPKFRFDMRTGFPLLTSKQVFTRQV 59

Query: 56  VHELLWFLRGDSNVSYLH-----RHGVSIWDEWADKDGEL----------------GPIY 94
           + E LWFL G++ +  L       +    W  W+D                     G IY
Sbjct: 60  IGEALWFLNGENKLGELRYRTWGENDGERWTIWSDDFKRWLSSNYSSEQDWLEDAGGRIY 119

Query: 95  GVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI--DKMALPPCHCLFQF 152
           GVQWR++  ++G V+DQ+ ++V  ++ D   R  +V+AWN A I  + MAL PCH LFQ 
Sbjct: 120 GVQWRNFEGHNGCVVDQLETLVTKMKGDITDRYMLVNAWNAADIAANSMALAPCHVLFQI 179

Query: 153 YVDN-GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           Y+ N G++  Q YQRS D FLG+PFNIASY  +  +L  + G+     I   GD  +Y N
Sbjct: 180 YITNEGEVDLQWYQRSVDTFLGLPFNIASYGFILEVLCKMTGYTPRYLIGVFGDTQIYQN 239

Query: 212 HFEQADLQLSRSPRTLPQMII---NPNIVDLLSFRYEDFT--LRSYEPHAAILAKVSV 264
           H +Q    ++      P   I      + DL      DF   + +Y+    I A +SV
Sbjct: 240 HMKQVYELMNNEEFHAPTFEIGVQLNTLSDLKHLTASDFIGGINNYQHAGKIEAPLSV 297


>gi|289423078|ref|ZP_06424893.1| thymidylate synthase [Peptostreptococcus anaerobius 653-L]
 gi|289156409|gb|EFD05059.1| thymidylate synthase [Peptostreptococcus anaerobius 653-L]
          Length = 277

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 25/276 (9%)

Query: 6   DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSV 55
           +L   ++   +            D +   T        ++DLSKG  P++T ++  WKS 
Sbjct: 10  NLCNEIMTSNNSTEGEKVRPKYADGSPSHTIFVNQVFEKYDLSKGELPIVTLRQTAWKSG 69

Query: 56  VHELLWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
           + E+LW  +  +N   + +  +G++ WDEW   D  +G  YG   + +        D I+
Sbjct: 70  IKEILWIYQDQTNDLDILKDKYGITWWDEWDIGDRTIGQRYGATVKRY--------DLIN 121

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
            ++  L+  PY RRHI++ +  A + +   L PC    Q+   +G L   L QRS D+ +
Sbjct: 122 KLLDGLKNQPYGRRHIINLYQEADLAETKGLHPCAMETQWTARDGYLDMTLIQRSSDLLV 181

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP---Q 229
               N   Y  L MM+A  +G + G F H + + H+Y+ H +QA   +SR P+      +
Sbjct: 182 ANAINKIQYVALQMMVARHVGLEPGVFCHYVNNAHIYDRHIDQAKEIMSRKPQENDESVR 241

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           +++NP   +   F  +DFT+ +Y P    +  ++++
Sbjct: 242 LVLNPEKTNFYDFTIDDFTMENYNPVKPNLKFEMAI 277


>gi|322387374|ref|ZP_08060984.1| thymidylate synthase [Streptococcus infantis ATCC 700779]
 gi|321141903|gb|EFX37398.1| thymidylate synthase [Streptococcus infantis ATCC 700779]
          Length = 279

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++  G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILNEGVFSEQARPKYKDGTVANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  +N   +   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQTNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|306824917|ref|ZP_07458261.1| thymidylate synthase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304433128|gb|EFM36100.1| thymidylate synthase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 279

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DL+KG FP+ T + +  KS + E+
Sbjct: 12  IERILKEGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLEVLNSKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|148989041|ref|ZP_01820441.1| thymidylate synthase [Streptococcus pneumoniae SP6-BS73]
 gi|147925538|gb|EDK76615.1| thymidylate synthase [Streptococcus pneumoniae SP6-BS73]
          Length = 279

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ ++
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+       + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTSFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|254520802|ref|ZP_05132858.1| thymidylate synthase [Clostridium sp. 7_2_43FAA]
 gi|226914551|gb|EEH99752.1| thymidylate synthase [Clostridium sp. 7_2_43FAA]
          Length = 280

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 22/263 (8%)

Query: 6   DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSV 55
           D L  ++  G             D T   T        ++D+SKG FP+ T + V WKS 
Sbjct: 15  DTLNDILTSGVSTEGHKVRPKYKDGTPAHTIYINQVVEKYDISKGEFPITTLRPVAWKSG 74

Query: 56  VHELLWFLRGDSN-VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
           + E+LW  +  SN +S L   G++ W +W  +  G +G  YG   + +        D ++
Sbjct: 75  IKEILWIYQKASNELSVLEEMGITWWGDWEVNGTGTIGQRYGATVKKY--------DLMN 126

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
            ++  L+ +PY+RRHI+  +  A  ++   L PC  L  + V +  L   L+QRS D   
Sbjct: 127 KLLDGLKNEPYTRRHIIDLYQYADFEETPGLNPCAFLTVWSVRDKYLDVTLHQRSSDYCT 186

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMI 231
               N   Y  L MM+A  +G + G F+H + ++H+Y+ H EQA   + R+P    P++I
Sbjct: 187 AGHINKTQYVALMMMVARHVGLKPGVFMHVVDNLHIYDRHVEQAKELIERTPSDKQPKLI 246

Query: 232 INPNIVDLLSFRYEDFTLRSYEP 254
           +     +   F  +DF +  YEP
Sbjct: 247 LKEGKTNFYDFTIDDFEMVDYEP 269


>gi|257464160|ref|ZP_05628541.1| thymidylate synthase [Fusobacterium sp. D12]
 gi|317061676|ref|ZP_07926161.1| thymidylate synthase [Fusobacterium sp. D12]
 gi|313687352|gb|EFS24187.1| thymidylate synthase [Fusobacterium sp. D12]
          Length = 272

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 25/278 (8%)

Query: 2   HQYLDLLRHVIKFGSDRR--------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHW 52
            +Y  L+ ++ + G            D T    +   GYQ R D +     L+T++K  W
Sbjct: 5   EEYRKLVDYICEKGEMVEGKVRTVYADGTPAYYKQIVGYQFRLDNAGDEAFLITSRKAAW 64

Query: 53  KSVVHELLWFL-RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQ 111
           KS + EL W      +NV  L   G   W+EW  +DG +G  YG Q            +Q
Sbjct: 65  KSSIRELYWIWYLQSNNVDELVDLGCKFWNEWKQEDGTIGKAYGYQIAKKT---FQYQNQ 121

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           +  ++  ++ +P SRR +   W    +++MAL PC  L Q+ V NGKL  ++ QRS DV 
Sbjct: 122 LDYVIGEIKNNPNSRRILTEIWIPEELEQMALTPCVHLTQWTVLNGKLYLEVRQRSCDVA 181

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           LG+  N+  Y +L  ++A       G+ I T+ + H+Y+ H E    Q+  + R  P++ 
Sbjct: 182 LGLVANVFQYQVLHKLVARECHLSCGDLIWTIHNAHIYDRHLEDLQKQVKETGREKPRL- 240

Query: 232 INPNIVDLLSFRYEDF----TLRSYEPHAA-ILAKVSV 264
                 DL     E+F     + +Y P       +V++
Sbjct: 241 ------DLGEAGLENFHQKVRVENYHPLDNDYKYEVAI 272


>gi|301793850|emb|CBW36243.1| thymidylate synthase [Streptococcus pneumoniae INV104]
 gi|332204686|gb|EGJ18751.1| thymidylate synthase [Streptococcus pneumoniae GA47901]
          Length = 279

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP++T + +  KS + E+
Sbjct: 12  IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPIITLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ ++
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|15900570|ref|NP_345174.1| thymidylate synthase [Streptococcus pneumoniae TIGR4]
 gi|15902629|ref|NP_358179.1| thymidylate synthase [Streptococcus pneumoniae R6]
 gi|111658670|ref|ZP_01409313.1| hypothetical protein SpneT_02000176 [Streptococcus pneumoniae
           TIGR4]
 gi|116516193|ref|YP_816080.1| thymidylate synthase [Streptococcus pneumoniae D39]
 gi|148992222|ref|ZP_01821945.1| thymidylate synthase [Streptococcus pneumoniae SP9-BS68]
 gi|148997250|ref|ZP_01824904.1| thymidylate synthase [Streptococcus pneumoniae SP11-BS70]
 gi|149002362|ref|ZP_01827304.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS69]
 gi|149010709|ref|ZP_01832080.1| thymidylate synthase [Streptococcus pneumoniae SP19-BS75]
 gi|149020283|ref|ZP_01835175.1| thymidylate synthase [Streptococcus pneumoniae SP23-BS72]
 gi|168482897|ref|ZP_02707849.1| thymidylate synthase [Streptococcus pneumoniae CDC1873-00]
 gi|168488350|ref|ZP_02712549.1| thymidylate synthase [Streptococcus pneumoniae SP195]
 gi|168492256|ref|ZP_02716399.1| thymidylate synthase [Streptococcus pneumoniae CDC0288-04]
 gi|168492827|ref|ZP_02716970.1| thymidylate synthase [Streptococcus pneumoniae CDC3059-06]
 gi|168575339|ref|ZP_02721275.1| thymidylate synthase [Streptococcus pneumoniae MLV-016]
 gi|169833725|ref|YP_001694142.1| thymidylate synthase [Streptococcus pneumoniae Hungary19A-6]
 gi|225856362|ref|YP_002737873.1| thymidylate synthase [Streptococcus pneumoniae P1031]
 gi|225858497|ref|YP_002740007.1| thymidylate synthase [Streptococcus pneumoniae 70585]
 gi|225860660|ref|YP_002742169.1| thymidylate synthase [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650310|ref|ZP_04524562.1| thymidylate synthase [Streptococcus pneumoniae CCRI 1974]
 gi|237821973|ref|ZP_04597818.1| thymidylate synthase [Streptococcus pneumoniae CCRI 1974M2]
 gi|298229819|ref|ZP_06963500.1| thymidylate synthase [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254801|ref|ZP_06978387.1| thymidylate synthase [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502463|ref|YP_003724403.1| thymidylate synthase [Streptococcus pneumoniae TCH8431/19A]
 gi|307067287|ref|YP_003876253.1| thymidylate synthase [Streptococcus pneumoniae AP200]
 gi|54039799|sp|P67050|TYSY_STRR6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54042284|sp|P67049|TYSY_STRPN RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|122279034|sp|Q04LL8|TYSY_STRP2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790250|sp|C1C631|TYSY_STRP7 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790253|sp|C1CJD5|TYSY_STRZP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790254|sp|C1CQE7|TYSY_STRZT RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|14972144|gb|AAK74814.1| thymidylate synthase [Streptococcus pneumoniae TIGR4]
 gi|15458166|gb|AAK99389.1| Thymidylate synthase [Streptococcus pneumoniae R6]
 gi|116076769|gb|ABJ54489.1| thymidylate synthase [Streptococcus pneumoniae D39]
 gi|147756950|gb|EDK63990.1| thymidylate synthase [Streptococcus pneumoniae SP11-BS70]
 gi|147759677|gb|EDK66668.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS69]
 gi|147765190|gb|EDK72119.1| thymidylate synthase [Streptococcus pneumoniae SP19-BS75]
 gi|147928848|gb|EDK79860.1| thymidylate synthase [Streptococcus pneumoniae SP9-BS68]
 gi|147930585|gb|EDK81567.1| thymidylate synthase [Streptococcus pneumoniae SP23-BS72]
 gi|168996227|gb|ACA36839.1| thymidylate synthase [Streptococcus pneumoniae Hungary19A-6]
 gi|172043796|gb|EDT51842.1| thymidylate synthase [Streptococcus pneumoniae CDC1873-00]
 gi|183573208|gb|EDT93736.1| thymidylate synthase [Streptococcus pneumoniae SP195]
 gi|183573554|gb|EDT94082.1| thymidylate synthase [Streptococcus pneumoniae CDC0288-04]
 gi|183576820|gb|EDT97348.1| thymidylate synthase [Streptococcus pneumoniae CDC3059-06]
 gi|183578413|gb|EDT98941.1| thymidylate synthase [Streptococcus pneumoniae MLV-016]
 gi|225721852|gb|ACO17706.1| thymidylate synthase [Streptococcus pneumoniae 70585]
 gi|225726198|gb|ACO22050.1| thymidylate synthase [Streptococcus pneumoniae P1031]
 gi|225726770|gb|ACO22621.1| thymidylate synthase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238058|gb|ADI69189.1| thymidylate synthase [Streptococcus pneumoniae TCH8431/19A]
 gi|306408824|gb|ADM84251.1| Thymidylate synthase [Streptococcus pneumoniae AP200]
 gi|327390399|gb|EGE88740.1| thymidylate synthase [Streptococcus pneumoniae GA04375]
 gi|332074474|gb|EGI84950.1| thymidylate synthase [Streptococcus pneumoniae GA17570]
 gi|332075963|gb|EGI86429.1| thymidylate synthase [Streptococcus pneumoniae GA41301]
 gi|332202546|gb|EGJ16615.1| thymidylate synthase [Streptococcus pneumoniae GA41317]
 gi|332203827|gb|EGJ17894.1| thymidylate synthase [Streptococcus pneumoniae GA47368]
          Length = 279

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ ++
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|149005786|ref|ZP_01829525.1| thymidylate synthase [Streptococcus pneumoniae SP18-BS74]
 gi|307126865|ref|YP_003878896.1| thymidylate synthase [Streptococcus pneumoniae 670-6B]
 gi|147762726|gb|EDK69686.1| thymidylate synthase [Streptococcus pneumoniae SP18-BS74]
 gi|306483927|gb|ADM90796.1| thymidylate synthase [Streptococcus pneumoniae 670-6B]
 gi|332077096|gb|EGI87558.1| thymidylate synthase [Streptococcus pneumoniae GA17545]
          Length = 279

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ ++
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLIQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|182683595|ref|YP_001835342.1| thymidylate synthase [Streptococcus pneumoniae CGSP14]
 gi|303254749|ref|ZP_07340850.1| thymidylate synthase [Streptococcus pneumoniae BS455]
 gi|303259941|ref|ZP_07345915.1| thymidylate synthase [Streptococcus pneumoniae SP-BS293]
 gi|303261347|ref|ZP_07347295.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS292]
 gi|303264013|ref|ZP_07349934.1| thymidylate synthase [Streptococcus pneumoniae BS397]
 gi|303266327|ref|ZP_07352217.1| thymidylate synthase [Streptococcus pneumoniae BS457]
 gi|303268794|ref|ZP_07354582.1| thymidylate synthase [Streptococcus pneumoniae BS458]
 gi|182628929|gb|ACB89877.1| thymidylate synthase [Streptococcus pneumoniae CGSP14]
 gi|301801532|emb|CBW34224.1| thymidylate synthase [Streptococcus pneumoniae INV200]
 gi|302598289|gb|EFL65334.1| thymidylate synthase [Streptococcus pneumoniae BS455]
 gi|302637481|gb|EFL67968.1| thymidylate synthase [Streptococcus pneumoniae SP14-BS292]
 gi|302638860|gb|EFL69321.1| thymidylate synthase [Streptococcus pneumoniae SP-BS293]
 gi|302641659|gb|EFL72018.1| thymidylate synthase [Streptococcus pneumoniae BS458]
 gi|302644138|gb|EFL74395.1| thymidylate synthase [Streptococcus pneumoniae BS457]
 gi|302646418|gb|EFL76644.1| thymidylate synthase [Streptococcus pneumoniae BS397]
          Length = 279

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ ++
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRIDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|322391615|ref|ZP_08065084.1| thymidylate synthase [Streptococcus peroris ATCC 700780]
 gi|321145698|gb|EFX41090.1| thymidylate synthase [Streptococcus peroris ATCC 700780]
          Length = 279

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++  G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILNEGVFSEQARPKYKDGTVANSKYVTGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  +N   +   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQTNSLEVLNDKYSVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|307704483|ref|ZP_07641392.1| thymidylate synthase [Streptococcus mitis SK597]
 gi|307621952|gb|EFO00980.1| thymidylate synthase [Streptococcus mitis SK597]
          Length = 279

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DL+KG FP+ T + +  KS + E+
Sbjct: 12  IERILKEGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ ++
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|306829804|ref|ZP_07462991.1| thymidylate synthase [Streptococcus mitis ATCC 6249]
 gi|304427815|gb|EFM30908.1| thymidylate synthase [Streptococcus mitis ATCC 6249]
          Length = 279

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLEVLNSKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLGREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|293365781|ref|ZP_06612487.1| thymidylate synthase [Streptococcus oralis ATCC 35037]
 gi|307703351|ref|ZP_07640294.1| thymidylate synthase [Streptococcus oralis ATCC 35037]
 gi|291315714|gb|EFE56161.1| thymidylate synthase [Streptococcus oralis ATCC 35037]
 gi|307623087|gb|EFO02081.1| thymidylate synthase [Streptococcus oralis ATCC 35037]
          Length = 279

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLDVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|18656511|gb|AAL77812.1|AF389451_19 thymidylate synthase [Tiger frog virus]
          Length = 124

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 69/124 (55%), Positives = 88/124 (70%)

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
           MA+PPCH + QFYV +G+LSC LYQRSGD+ LG PFNIASYSLLT M+A V G + GEF+
Sbjct: 1   MAIPPCHAMCQFYVSDGELSCHLYQRSGDMGLGAPFNIASYSLLTYMMAHVTGLEPGEFV 60

Query: 201 HTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILA 260
           HTLGD H+Y +H E    QL R PR  P + IN ++  L  F+ EDF+L  Y+PH  I  
Sbjct: 61  HTLGDAHVYLDHVEPLKTQLEREPRPFPTLRINRSVESLDDFKAEDFSLEGYDPHPTIKM 120

Query: 261 KVSV 264
           +++V
Sbjct: 121 RMAV 124


>gi|289803171|ref|ZP_06533800.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 130

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 76/130 (58%), Positives = 106/130 (81%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1   MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           WFL+GD+N++YLH + V+IWDEWAD++G+LGP+YG QWR+WP  DG  IDQI++++  L+
Sbjct: 61  WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQIATVLSQLK 120

Query: 121 ADPYSRRHIV 130
            DP SRR IV
Sbjct: 121 NDPDSRRIIV 130


>gi|307706250|ref|ZP_07643064.1| thymidylate synthase [Streptococcus mitis SK321]
 gi|307618341|gb|EFN97494.1| thymidylate synthase [Streptococcus mitis SK321]
          Length = 279

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DL+KG FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|219681334|ref|YP_002456098.1| putative thymidylate synthase [Erwinia phage phiEa21-4]
 gi|199580601|gb|ACH88988.1| putative thymidylate synthase [Erwinia phage phiEa21-4]
          Length = 311

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 100/310 (32%), Positives = 140/310 (45%), Gaps = 52/310 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRST-FGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
            QY     +++  G  R  R+G  T S  F   +R D+ K FPLLT K V    V  ELL
Sbjct: 6   QQYKAFTANILSNGELRHSRSG-NTISVPFPEDLRIDVRKEFPLLTCKSVPMSLVAGELL 64

Query: 61  WFLRGDSNVSYLHRHGV-------SIWDEWA---------------------------DK 86
           WFL G +++  L  +         +IW                               D 
Sbjct: 65  WFLAGKTDLHSLRMYQFGSDEGQNTIWTADYERYSKAVKSLIRKVQTGESQEKTLRKIDA 124

Query: 87  DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM--ALP 144
             +LG IYG QWR +   D    DQI+ +++ ++ +P SR HIVSAWN   +     ALP
Sbjct: 125 QEDLGMIYGSQWREFESCD-TTCDQITRLIEGIKENPASRYHIVSAWNPVAVANNLGALP 183

Query: 145 PCHCLFQFYVDNG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           PCH  FQ Y   G  +  + YQRS D FLG+PFNIASY+LL  +LA + G+     I + 
Sbjct: 184 PCHMFFQVYASEGGYMDLRWYQRSVDTFLGLPFNIASYALLLRILAQMTGYTARYVIGSF 243

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMII-NPNIVDLLS--------FRYEDFTLRSYEP 254
           GD H+Y NH       +       P + + N ++  L S        F+     L+ Y+ 
Sbjct: 244 GDAHIYENHVPAVMQMMDNPEFDAPTLKLDNLDLSSLDSVLKLNGLVFKN---ALQDYQN 300

Query: 255 HAAILAKVSV 264
              + A +SV
Sbjct: 301 AGVVKAPLSV 310


>gi|322376984|ref|ZP_08051477.1| thymidylate synthase [Streptococcus sp. M334]
 gi|321282791|gb|EFX59798.1| thymidylate synthase [Streptococcus sp. M334]
          Length = 279

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DL+KG FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   R          D I+ ++
Sbjct: 72  LWIYQDQSNSLEMLNDKYNVHYWNDWEVGDTGTIGERYGAVVRKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|322375542|ref|ZP_08050054.1| thymidylate synthase [Streptococcus sp. C300]
 gi|321279250|gb|EFX56291.1| thymidylate synthase [Streptococcus sp. C300]
          Length = 279

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DL+KG FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +  +++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLEVLNNKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    +    L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYEAFEATDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|157151425|ref|YP_001450432.1| thymidylate synthase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189036950|sp|A8AXC2|TYSY_STRGC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|157076219|gb|ABV10902.1| thymidylate synthase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 279

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 80/276 (28%), Positives = 134/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +R ++K G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IRRILKEGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLAANPWNRRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDEDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279


>gi|34485973|gb|AAM75815.2| thymidylate synthase [Corallochytrium limacisporum]
          Length = 207

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 21/167 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYL+L+  +I  GS + DRTG GT S FG QMRF L    FPLLTTK+V W+ V  ELL
Sbjct: 41  RQYLELVEKIINEGSRKGDRTGTGTLSIFGAQMRFSLRDDIFPLLTTKRVFWRGVAEELL 100

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP------ 102
           WF+ GD+N   L    V IWD                ++G+LGP+YG QWR +       
Sbjct: 101 WFVSGDTNAKTLSDKNVKIWDANGSREFLDNRGLTDREEGDLGPVYGFQWRHFGAEYTTM 160

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCH 147
             DY G  +DQ++ ++Q+L+ +P  RR I+SAWN A + KMALPPCH
Sbjct: 161 HDDYTGKGVDQLAEVIQTLQENPNCRRMIISAWNPADLPKMALPPCH 207


>gi|307706041|ref|ZP_07642862.1| thymidylate synthase [Streptococcus mitis SK564]
 gi|307620399|gb|EFN99514.1| thymidylate synthase [Streptococcus mitis SK564]
          Length = 279

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DL+KG FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ ++
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|315613465|ref|ZP_07888373.1| thymidylate synthase [Streptococcus sanguinis ATCC 49296]
 gi|315314461|gb|EFU62505.1| thymidylate synthase [Streptococcus sanguinis ATCC 49296]
          Length = 279

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLS + FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLSKEEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLDVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLGREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|194396733|ref|YP_002037325.1| thymidylate synthase [Streptococcus pneumoniae G54]
 gi|194356400|gb|ACF54848.1| thymidylate synthase [Streptococcus pneumoniae G54]
          Length = 279

 Score =  194 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ + 
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLF 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRIDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|148985252|ref|ZP_01818475.1| thymidylate synthase [Streptococcus pneumoniae SP3-BS71]
 gi|168487239|ref|ZP_02711747.1| thymidylate synthase [Streptococcus pneumoniae CDC1087-00]
 gi|221231485|ref|YP_002510637.1| thymidylate synthase [Streptococcus pneumoniae ATCC 700669]
 gi|225854195|ref|YP_002735707.1| thymidylate synthase [Streptococcus pneumoniae JJA]
 gi|254790251|sp|B8ZMQ1|TYSY_STRPJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|254790252|sp|C1CD36|TYSY_STRZJ RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|147922450|gb|EDK73569.1| thymidylate synthase [Streptococcus pneumoniae SP3-BS71]
 gi|183569880|gb|EDT90408.1| thymidylate synthase [Streptococcus pneumoniae CDC1087-00]
 gi|220673945|emb|CAR68454.1| thymidylate synthase [Streptococcus pneumoniae ATCC 700669]
 gi|225722869|gb|ACO18722.1| thymidylate synthase [Streptococcus pneumoniae JJA]
 gi|301799707|emb|CBW32272.1| thymidylate synthase [Streptococcus pneumoniae OXC141]
          Length = 279

 Score =  194 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IECILKEGVFSEQARPKYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ ++
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR-TLPQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|312863183|ref|ZP_07723421.1| thymidylate synthase [Streptococcus vestibularis F0396]
 gi|322517189|ref|ZP_08070072.1| thymidylate synthase [Streptococcus vestibularis ATCC 49124]
 gi|311100719|gb|EFQ58924.1| thymidylate synthase [Streptococcus vestibularis F0396]
 gi|322124248|gb|EFX95764.1| thymidylate synthase [Streptococcus vestibularis ATCC 49124]
          Length = 286

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/278 (26%), Positives = 132/278 (47%), Gaps = 24/278 (8%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  +++ G           D T   ++   G    +DLS+G FP+ T + +  KS + E+
Sbjct: 12  ITKILEEGVWSEQARPKYKDGTTANSKYITGAFAEYDLSRGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114
            W  +  +N   +    + V  W++W  +D    P      RS     G V+   D I+ 
Sbjct: 72  FWIYQDQTNSLDVLEDKYNVHYWNDWEVEDV---PANNGDKRSIGQRYGAVVKKHDIINR 128

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169
           ++  L A+P++RR+++S W+    ++   L PC     F V     +  L   L QRS D
Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSND 188

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228
           + +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P
Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248

Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++I+N P+  +    + EDF L  Y+P    +   +++
Sbjct: 249 RLILNVPDGTNFFDIKPEDFELVDYDPVKPQLKFDLAI 286


>gi|307708422|ref|ZP_07644888.1| thymidylate synthase [Streptococcus mitis NCTC 12261]
 gi|307615521|gb|EFN94728.1| thymidylate synthase [Streptococcus mitis NCTC 12261]
          Length = 279

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYMTGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ ++
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDKTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|327198463|ref|YP_004327051.1| putative thymidylate synthase [Erwinia phage phiEa104]
 gi|311875159|emb|CBX44419.1| putative thymidylate synthase [Erwinia phage phiEa104]
          Length = 311

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 101/310 (32%), Positives = 140/310 (45%), Gaps = 52/310 (16%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRST-FGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
            QY     +++  G  R  R+G  T S  F   +R D+ K FPLLT K V    V  ELL
Sbjct: 6   QQYKAFTANILSNGELRHSRSG-NTISVPFPEDLRIDVRKEFPLLTCKSVPMSLVAGELL 64

Query: 61  WFLRGDSNVSYLHRHGV-------SIWDEWA---------------------------DK 86
           WFL G +++  L  +         +IW                               D 
Sbjct: 65  WFLAGKTDLHSLRMYQFGSDEGQNTIWTADYERYSKAVKSLIRKVQTGELQEKTLRKIDA 124

Query: 87  DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM--ALP 144
             +LG IYG QWR +   D    DQI+ ++Q ++ +P SR HIVSAWN   +     ALP
Sbjct: 125 QEDLGMIYGSQWREFESCD-TTCDQITRLIQGIKENPASRYHIVSAWNPVAVANNLGALP 183

Query: 145 PCHCLFQFYVDNG-KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           PCH  FQ Y   G  +  + YQRS D FLG+PFNIASY+LL  +LA + G+     I + 
Sbjct: 184 PCHMFFQVYASEGGYMDLRWYQRSVDTFLGLPFNIASYALLLRILAQMTGYTARYVIGSF 243

Query: 204 GDVHLYNNHFEQADLQLSRSPRTLPQMII-NPNIVDLLS--------FRYEDFTLRSYEP 254
           GD H+Y NH       +       P + + N ++  L S        F+     L+ Y+ 
Sbjct: 244 GDAHIYENHVPAVMQMMDNPEFDAPTLKLDNLDLSSLDSVLKLNGLVFKN---ALQDYQN 300

Query: 255 HAAILAKVSV 264
              + A +SV
Sbjct: 301 AGVVKAPLSV 310


>gi|289168310|ref|YP_003446579.1| thymidylate synthase [Streptococcus mitis B6]
 gi|288907877|emb|CBJ22717.1| thymidylate synthase [Streptococcus mitis B6]
          Length = 279

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DL+KG FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ ++
Sbjct: 72  LWIYQDQSNSLDVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    R +DF L  Y P    +   +++
Sbjct: 244 VLNVPDKTNFFDIRADDFELVDYNPVKPQLKFDLAI 279


>gi|331266063|ref|YP_004325693.1| thymidylate synthase [Streptococcus oralis Uo5]
 gi|326682735|emb|CBZ00352.1| thymidylate synthase [Streptococcus oralis Uo5]
          Length = 279

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYVTGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLEVLNDKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+I+S W+    +    L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLEENPWNRRNIISLWDYEAFEATDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRKPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYDPVKPQLKFDLAI 279


>gi|327462282|gb|EGF08609.1| thymidylate synthase [Streptococcus sanguinis SK1]
          Length = 279

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDVTLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELIDYDPVKPQLKFDLAI 279


>gi|223932110|ref|ZP_03624114.1| Thymidylate synthase [Streptococcus suis 89/1591]
 gi|302023730|ref|ZP_07248941.1| thymidylate synthase [Streptococcus suis 05HAS68]
 gi|330832764|ref|YP_004401589.1| thymidylate synthase [Streptococcus suis ST3]
 gi|223899091|gb|EEF65448.1| Thymidylate synthase [Streptococcus suis 89/1591]
 gi|329306987|gb|AEB81403.1| thymidylate synthase [Streptococcus suis ST3]
          Length = 279

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +R +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IRKIMEEGVFSENARPRYKDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEI 71

Query: 60  LWFLRGDSN-VSYLHR-HGVSIWDEWADK-DGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  +N +S L   +GV  W++W  +  G +G  YG   +          D IS I+
Sbjct: 72  LWIYQDQTNDLSVLQEKYGVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    D+   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEENPWNRRNVISLWDYEAFDQSAGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R+P  + P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    R EDF L  Y P    +   +++
Sbjct: 244 VLNVPDGTNFFDIRAEDFELVDYNPVKPQLKFDLAI 279


>gi|270292276|ref|ZP_06198490.1| thymidylate synthase [Streptococcus sp. M143]
 gi|270279322|gb|EFA25165.1| thymidylate synthase [Streptococcus sp. M143]
          Length = 279

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++K G           D T   ++   G    +DL+ G FP+ T + +  KS + E+
Sbjct: 12  IERILKDGVFSEQARPKYKDGTVANSKYVTGAFAEYDLAMGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLEVLNSKYNVHYWNDWEVGDTGTIGERYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEANPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKIGKFFYFINNLHIYDNQFEQAQELLRREPSNCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELVDYNPVKPQLKFDLAI 279


>gi|146318488|ref|YP_001198200.1| thymidylate synthase [Streptococcus suis 05ZYH33]
 gi|146320681|ref|YP_001200392.1| thymidylate synthase [Streptococcus suis 98HAH33]
 gi|253751616|ref|YP_003024757.1| thymidylate synthase [Streptococcus suis SC84]
 gi|253753518|ref|YP_003026659.1| thymidylate synthase [Streptococcus suis P1/7]
 gi|253755657|ref|YP_003028797.1| thymidylate synthase [Streptococcus suis BM407]
 gi|166231739|sp|A4W0V3|TYSY_STRS2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231741|sp|A4VUL1|TYSY_STRSY RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|145689294|gb|ABP89800.1| Thymidylate synthase [Streptococcus suis 05ZYH33]
 gi|145691487|gb|ABP91992.1| Thymidylate synthase [Streptococcus suis 98HAH33]
 gi|251815905|emb|CAZ51519.1| thymidylate synthase [Streptococcus suis SC84]
 gi|251818121|emb|CAZ55915.1| thymidylate synthase [Streptococcus suis BM407]
 gi|251819764|emb|CAR45658.1| thymidylate synthase [Streptococcus suis P1/7]
 gi|292558271|gb|ADE31272.1| Thymidylate synthase [Streptococcus suis GZ1]
          Length = 279

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +R +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IRKIMEEGVFSENARPRYKDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEI 71

Query: 60  LWFLRGDSN-VSYLHR-HGVSIWDEWADK-DGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  +N +S L   +GV  W++W  +  G +G  YG   +          D IS I+
Sbjct: 72  LWIYQDQTNDLSVLQEKYGVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    D+   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEENPWNRRNVISLWDYEAFDQSAGLLPCAFQTLFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R+P  + P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    R EDF L  Y P    +   +++
Sbjct: 244 VLNVPDGTNFFDIRAEDFELVDYNPVKPQLKFDLAI 279


>gi|262282289|ref|ZP_06060057.1| thymidylate synthase [Streptococcus sp. 2_1_36FAA]
 gi|262261580|gb|EEY80278.1| thymidylate synthase [Streptococcus sp. 2_1_36FAA]
          Length = 279

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +R ++K G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IRRILKEGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W     G +G  YG   +          D I  I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGATGTIGQRYGAVVKKH--------DIIHIIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279


>gi|322372507|ref|ZP_08047043.1| thymidylate synthase [Streptococcus sp. C150]
 gi|321277549|gb|EFX54618.1| thymidylate synthase [Streptococcus sp. C150]
          Length = 286

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 75/278 (26%), Positives = 132/278 (47%), Gaps = 24/278 (8%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  +++ G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  ITKIMEEGVWSEQARPKYKDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114
            W  +  +N   +    + V  W++W  +D    P      RS     G V+   D I+ 
Sbjct: 72  FWIYQDQTNSLDVLEDKYNVHYWNDWEVEDV---PANNGDKRSIGQRYGAVVKKHDIINR 128

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169
           ++  L A+P++RR+++S W+    ++   L PC     F V     +  L   L QRS D
Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSND 188

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228
           + +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P
Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHVYDNQFEQAEELLKRQPSDCQP 248

Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++I+N P+  +    + EDF L  Y+P    +   +++
Sbjct: 249 RLILNVPDGTNFFDIKPEDFELVDYDPVQPQLKFDLAI 286


>gi|228478258|ref|ZP_04062866.1| thymidylate synthase [Streptococcus salivarius SK126]
 gi|228249937|gb|EEK09207.1| thymidylate synthase [Streptococcus salivarius SK126]
          Length = 286

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 24/278 (8%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  +++ G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  ITKIMEEGVWSEQARPKYKDGTTANSKYITGAFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114
            W  +  +N   +    + V  W++W  +     P      RS     G V+   D I+ 
Sbjct: 72  FWIYQDQTNSLDVLEDKYNVHYWNDWEVEGV---PANNGDKRSIGQRYGAVVKKHDIINR 128

Query: 115 IVQSLRADPYSRRHIVSAWNVALID-KMALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169
           ++  L A+P++RR+++S W+    +    L PC     F V     +  L   L QRS D
Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEATAGLQPCAFQTMFDVRRVGEDIYLDATLTQRSND 188

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228
           + +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P
Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248

Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 249 RLVLNVPDGTNFFDIKPEDFELVDYDPVKPQLKFDLAI 286


>gi|55820657|ref|YP_139099.1| thymidylate synthase [Streptococcus thermophilus LMG 18311]
 gi|62901192|sp|Q5M5B3|TYSY_STRT2 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|55736642|gb|AAV60284.1| thymidylate synthase [Streptococcus thermophilus LMG 18311]
          Length = 286

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 24/278 (8%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  +++ G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  ITKIMEEGVWSEQARPKYKDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114
            W  +  +N   +    + V  W++W  +     P      RS     G V+   D I+ 
Sbjct: 72  FWIYQDQTNSLDVLEDKYNVHYWNDWEVEGV---PANNGDKRSIGQRYGAVVKKHDIINR 128

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169
           ++  L A+P++RR+++S W+    ++   L PC     F V     +  L   L QRS D
Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDGTLTQRSND 188

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228
           + +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P
Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248

Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 249 RLVLNVPDETNFFDIKPEDFELVDYDPVKPQLKFDLAI 286


>gi|312866637|ref|ZP_07726851.1| thymidylate synthase [Streptococcus parasanguinis F0405]
 gi|311097718|gb|EFQ55948.1| thymidylate synthase [Streptococcus parasanguinis F0405]
          Length = 279

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 78/277 (28%), Positives = 130/277 (46%), Gaps = 29/277 (10%)

Query: 8   LRHVIKFGS--------DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           +R +++ G          +  RT   ++   G  M FDLSKG FP+ T + +  KS + E
Sbjct: 12  IRKIMEEGVWSEQARPKYKDGRT-ANSKYITGAFMEFDLSKGEFPITTLRPIAIKSAIKE 70

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSI 115
           +LW  +  SN   L    + V  W++W   D   +G  YG   +          D  + I
Sbjct: 71  MLWIYQDQSNSLDLLEDKYNVHYWNDWEVGDSRTIGQRYGAVVKKH--------DITNKI 122

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170
           ++ L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+
Sbjct: 123 LKQLEANPWNRRNIISLWDYDAFEETEGLLPCAFQTMFDVRRVDEEIYLDATLTQRSNDM 182

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229
            +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P 
Sbjct: 183 LVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPH 242

Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           +++N  +       + EDF L  Y+P    +   +++
Sbjct: 243 LVLNVADGTSFFDIKPEDFELVDYDPVKPQLKFDLAI 279


>gi|116627466|ref|YP_820085.1| thymidylate synthase [Streptococcus thermophilus LMD-9]
 gi|122267936|sp|Q03LN3|TYSY_STRTD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116100743|gb|ABJ65889.1| thymidylate synthase [Streptococcus thermophilus LMD-9]
 gi|312277984|gb|ADQ62641.1| Thymidylate synthase [Streptococcus thermophilus ND03]
          Length = 286

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 24/278 (8%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  +++ G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  ITKIMEEGVWSEQARPKYKDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114
            W  +  +N   +    + V  W++W  +     P      RS     G V+   D I+ 
Sbjct: 72  FWIYQDQTNSLDVLEDKYNVHYWNDWEVEGV---PANNGDKRSIGQRYGAVVKKHDIINR 128

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169
           ++  L A+P++RR+++S W+    ++   L PC     F V     +  L   L QRS D
Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSND 188

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228
           + +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P
Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248

Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 249 RLVLNVPDETNFFDIKPEDFELVDYDPVKPQLKFDLAI 286


>gi|319758054|gb|ADV69996.1| thymidylate synthase [Streptococcus suis JS14]
          Length = 279

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +R +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IRKIMEEGVFSENARPRYKDGNVANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIKEI 71

Query: 60  LWFLRGDSN-VSYLHR-HGVSIWDEWADK-DGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  +N +S L   +GV  W++W  +  G +G  YG   +          D IS I+
Sbjct: 72  LWIYQDQTNDLSVLQEKYGVQYWNDWEVEGTGTIGERYGAIVKKH--------DIISKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L   P++RR+++S W+    D+   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEEKPWNRRNVISLWDYEAFDQSAGLLPCAFQTLFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R+P  + P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRRTPSEVEPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    R EDF L  Y P    +   +++
Sbjct: 244 VLNVPDGTNFFDIRAEDFELVDYNPVKPQLKFDLAI 279


>gi|306833692|ref|ZP_07466819.1| thymidylate synthase [Streptococcus bovis ATCC 700338]
 gi|304424462|gb|EFM27601.1| thymidylate synthase [Streptococcus bovis ATCC 700338]
          Length = 303

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRRDRTGV-------GTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G    +   V        ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 36  IKKIMEEGVFSENARPVYQSGGQANSKYVTGVFAEYDLSKGEFPITTLRPIPIKSAIREI 95

Query: 60  LWFLRGDSN--VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  +N       ++ V  W++W  D  G +G  YG   +          D I  I+
Sbjct: 96  FWIYQDQTNDLSVLNDKYNVKYWNDWEVDNSGTIGERYGAVVKKH--------DIIRKIL 147

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    +    L PC     + V        L   L QRS D+ 
Sbjct: 148 KQLEENPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDGEIYLDATLTQRSNDML 207

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   LSR      P++
Sbjct: 208 VSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRL 267

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  D    + EDF L  YEP    I   +++
Sbjct: 268 VLNVPDGTDFFDIKPEDFELVDYEPVKPQIKFDLAI 303


>gi|324992986|gb|EGC24906.1| thymidylate synthase [Streptococcus sanguinis SK405]
          Length = 279

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLGLLNDKYNVHYWNDWEVGDTGTIGQRYGAIVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDVTLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279


>gi|332360752|gb|EGJ38560.1| thymidylate synthase [Streptococcus sanguinis SK355]
          Length = 279

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          D I  I+
Sbjct: 72  LWIYQDQSNSLELLNDKYHVHYWNDWEVGDTGTIGQRYGAVVKKH--------DIIHKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSECQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDETNFFDIKAEDFELLDYDPVKPQLKFDLAI 279


>gi|296876428|ref|ZP_06900480.1| thymidylate synthase [Streptococcus parasanguinis ATCC 15912]
 gi|296432718|gb|EFH18513.1| thymidylate synthase [Streptococcus parasanguinis ATCC 15912]
          Length = 279

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 29/277 (10%)

Query: 8   LRHVIKFGS--------DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           +R +++ G          +  RT   ++   G  M FDL+KG FP+ T + +  KS + E
Sbjct: 12  IRKIMEEGVWSEQARPKYKDGRT-ANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKE 70

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSI 115
           +LW  +  SN   +    + V  W++W   D   +G  YG   +          D  + I
Sbjct: 71  MLWIYQDQSNSLDVLEEKYNVHYWNDWEVGDSRTIGQRYGAVVKKH--------DITNKI 122

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK----LSCQLYQRSGDV 170
           ++ L A+P++RR+I++ W+    ++   L PC     F V   +    L   L QRS D+
Sbjct: 123 LKQLEANPWNRRNIITLWDYDAFEESEGLLPCAFQTMFDVRRVEGEIYLDATLTQRSNDM 182

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS-PRTLPQ 229
            +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R      P+
Sbjct: 183 LVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREATNCQPR 242

Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           +++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 243 LVLNVPDGTNFFDIKPEDFELVDYDPVKPQLKFDLAI 279


>gi|323127105|gb|ADX24402.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 279

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 126/265 (47%), Gaps = 26/265 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++  G           D     ++   G    +DL+KG FP+ T + +  KS + EL
Sbjct: 12  IEKIMDEGVFSEQARPKYKDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKEL 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  +N   +  +++ V  W+EW   +   +G  YG   +          D IS ++
Sbjct: 72  LWIYQDQTNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAVVKKH--------DIISKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLAENPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVGEDLYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F QA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRQPTDCQPKL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254
           ++N P+  +    + EDF L+ YEP
Sbjct: 244 VLNVPDGTNFFDIKPEDFELQDYEP 268


>gi|55822548|ref|YP_140989.1| thymidylate synthase [Streptococcus thermophilus CNRZ1066]
 gi|62901188|sp|Q5M0S7|TYSY_STRT1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|55738533|gb|AAV62174.1| thymidylate synthase [Streptococcus thermophilus CNRZ1066]
          Length = 286

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 24/278 (8%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  +++ G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  ITKIMEEGVWSEQARPKYKDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114
            W  +  +N   +    + V  W++W  +     P      RS     G V+   D I+ 
Sbjct: 72  FWIYQDQTNSLDVLEDKYNVHYWNDWEVEGV---PANNGDKRSIGQRYGAVVKKHDIINR 128

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169
           ++  L A+P++RR+++S W+    ++   L PC     F V     +  L   L QRS D
Sbjct: 129 LLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSND 188

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228
           + +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P
Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKIGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248

Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 249 RLVLNVPDETNFFDIKPEDFELVDYDPVKPQLKFDLAI 286


>gi|327460436|gb|EGF06773.1| thymidylate synthase [Streptococcus sanguinis SK1057]
          Length = 279

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKILEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I  I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIIHKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLCREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 LLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279


>gi|251782256|ref|YP_002996558.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242390885|dbj|BAH81344.1| thymidylate synthase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 281

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 126/265 (47%), Gaps = 26/265 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++  G           D     ++   G    +DL+KG FP+ T + +  KS + EL
Sbjct: 14  IEKIMDEGVFSEQARPKYKDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKEL 73

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  +N   +  +++ V  W+EW   +   +G  YG   +          D IS ++
Sbjct: 74  LWIYQDQTNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAVVKKH--------DIISKLL 125

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 126 KQLAENPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVGEDLYLDATLTQRSNDML 185

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F QA   L R P    P++
Sbjct: 186 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRQPTDCQPKL 245

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254
           ++N P+  +    + EDF L+ YEP
Sbjct: 246 VLNVPDGTNFFDIKPEDFELQDYEP 270


>gi|332360702|gb|EGJ38511.1| thymidylate synthase [Streptococcus sanguinis SK49]
          Length = 279

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I+ I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKIGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279


>gi|125717921|ref|YP_001035054.1| thymidylate synthase [Streptococcus sanguinis SK36]
 gi|166231740|sp|A3CMU9|TYSY_STRSV RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|125497838|gb|ABN44504.1| Thymidylate synthase, putative [Streptococcus sanguinis SK36]
 gi|324995705|gb|EGC27617.1| thymidylate synthase [Streptococcus sanguinis SK678]
 gi|328946147|gb|EGG40292.1| thymidylate synthase [Streptococcus sanguinis SK1087]
          Length = 279

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I+ I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYNPVKPQLKFDLAI 279


>gi|327489635|gb|EGF21427.1| thymidylate synthase [Streptococcus sanguinis SK1058]
          Length = 279

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRRDRTG-------VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G    +            ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKNGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I+ I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYNPVKPQLKFDLAI 279


>gi|322385231|ref|ZP_08058878.1| thymidylate synthase [Streptococcus cristatus ATCC 51100]
 gi|321270855|gb|EFX53768.1| thymidylate synthase [Streptococcus cristatus ATCC 51100]
          Length = 279

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          D I  I+
Sbjct: 72  LWIYQDQSNSLELLNDKYHVHYWNDWEVGDTGTIGQRYGAVVKKH--------DIIHKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V        L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N PN  +    + EDF L +Y+P    +   +++
Sbjct: 244 VLNVPNGTNFFDIKAEDFELLNYDPVKPQLKFDLAI 279


>gi|327474155|gb|EGF19565.1| thymidylate synthase [Streptococcus sanguinis SK408]
          Length = 279

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I  I+
Sbjct: 72  LWIYQDQSNSLELLNEKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIIHKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFVLLDYDPVKPQLKFDLAI 279


>gi|291167144|gb|EFE29190.1| thymidylate synthase [Filifactor alocis ATCC 35896]
          Length = 278

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 26/281 (9%)

Query: 2   HQYLDLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVH 51
             + +L   +++ G + +         D T   T         +DL KG FP+LT + + 
Sbjct: 6   KNFKELCTRILEEGYNTKGEKVRPKYADGTPSHTYFVNQVWEEYDLQKGEFPILTLRHIA 65

Query: 52  WKSVVHELLWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNV 108
           WKS + E+LW  +  +N   +    + +  W++W  +    +G  YG   + +       
Sbjct: 66  WKSSIKEILWIYQDQTNSLDVLEDKYDIHWWNDWEVEQSRTIGQRYGATVKRY------- 118

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGKLSCQLYQRS 167
            D ++ ++  L+  PY RRHI++ +      +   L PC     + V +G L   L QRS
Sbjct: 119 -DLMNKLLNGLKTQPYGRRHIINLYQYQDFQETDGLFPCAMETHWSVRDGILDMTLIQRS 177

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
            DV +    N   Y  L MM+A    F+ G+F H + + H+Y+ H EQ    L R  +  
Sbjct: 178 SDVPVANAINKLQYVALMMMVAKHCDFKLGKFCHLVQNAHIYDRHVEQVKEMLERKGQED 237

Query: 228 PQ---MIINPNIVDLLSFRYEDFTLRSYEPH-AAILAKVSV 264
                ++++ +  D  +F  EDF L +YEP+      ++++
Sbjct: 238 CTDLRLVLDTDKTDFYTFTLEDFKLENYEPNKPNFKFELAI 278


>gi|322411591|gb|EFY02499.1| thymidylate synthase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 279

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 26/265 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++  G           D     ++   G    +DL+KG FP+ T + +  +S + EL
Sbjct: 12  IEKIMDEGVFSEQARPKYKDGRTANSKYITGAFAEYDLAKGEFPITTLRPIPIQSAIKEL 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  +N   +  +++ V  W+EW   +   +G  YG   +          D IS ++
Sbjct: 72  LWIYQDQTNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAVVKKH--------DIISKLL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK----LSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    ++   L PC     F V   +    L   L QRS D+ 
Sbjct: 124 KQLSENPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVEENLYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F QA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFPQAKELLKRHPTDCQPKL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254
           ++N P+  +    + EDF L+ YEP
Sbjct: 244 VLNVPDGTNFFDIKPEDFELQDYEP 268


>gi|171778303|ref|ZP_02919509.1| hypothetical protein STRINF_00351 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283003|gb|EDT48427.1| hypothetical protein STRINF_00351 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 279

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 70/276 (25%), Positives = 127/276 (46%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRRD-------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ ++  G    +            ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMDEGVFSENARPVYQSGRQANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREI 71

Query: 60  LWFLRGDSN--VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  +N       ++ V  W++W  D  G +G  YG   +          D I  I+
Sbjct: 72  FWIYQDQTNDLSVLNDKYNVKYWNDWEVDGTGTIGERYGAVVKKH--------DIIRKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    +    L PC     + V     +  L   L QRS D+ 
Sbjct: 124 KQLEENPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPTDCKPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  D    + EDF L  Y+     +   +++
Sbjct: 244 VLNVPDGTDFFDIKPEDFELVDYDSVKPQLKFDLAI 279


>gi|325689776|gb|EGD31780.1| thymidylate synthase [Streptococcus sanguinis SK115]
 gi|325696424|gb|EGD38314.1| thymidylate synthase [Streptococcus sanguinis SK160]
          Length = 279

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I+ I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF    Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFEFLDYDPVKPQLKFDLAI 279


>gi|322389617|ref|ZP_08063165.1| thymidylate synthase [Streptococcus parasanguinis ATCC 903]
 gi|321143616|gb|EFX39046.1| thymidylate synthase [Streptococcus parasanguinis ATCC 903]
          Length = 279

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 75/277 (27%), Positives = 131/277 (47%), Gaps = 29/277 (10%)

Query: 8   LRHVIKFGS--------DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           +R +++ G          +  RT   ++   G  M FDL+KG FP+ T + +  KS + E
Sbjct: 12  IRKIMEEGVWSEQARPKYKDGRT-ANSKYITGAFMEFDLAKGEFPITTLRPIAIKSAIKE 70

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSI 115
           +LW  +  SN   +    + V  W++W   +   +G  YG   +          D  + I
Sbjct: 71  MLWIYQDQSNRLDVLEDKYNVHYWNDWEVGNSRTIGQRYGAVVKKH--------DITNKI 122

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170
           ++ L  +P++RR+I+S W+    ++   L PC     F V        L   L QRS D+
Sbjct: 123 LKQLEDNPWNRRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDGEIYLDATLTQRSNDM 182

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229
            +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P 
Sbjct: 183 LVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCQPH 242

Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           +++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 243 LVLNVPDGTNFFDIKPEDFELVDYDPVKPQLKFDLAI 279


>gi|288905459|ref|YP_003430681.1| thymidylate synthase [Streptococcus gallolyticus UCN34]
 gi|306831541|ref|ZP_07464699.1| thymidylate synthase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|288732185|emb|CBI13750.1| thymidylate synthase [Streptococcus gallolyticus UCN34]
 gi|304426326|gb|EFM29440.1| thymidylate synthase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 279

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRRDRTGV-------GTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G    +   V        ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEEGVFSENARPVYQSGGQANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREI 71

Query: 60  LWFLRGDSN--VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  +N       ++ V  W++W  D  G +G  YG   +          D I  I+
Sbjct: 72  FWIYQDQTNDLSVLNDKYNVKYWNDWEVDNSGTIGERYGAVVKKH--------DIIRKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    +    L PC     + V        L   L QRS D+ 
Sbjct: 124 KQLEENPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   LSR      P++
Sbjct: 184 VSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  D    + EDF L  YEP    +   +++
Sbjct: 244 VLNVPDGTDFFDIKPEDFELVDYEPVKPQLKFDLAI 279


>gi|320546911|ref|ZP_08041213.1| thymidylate synthase [Streptococcus equinus ATCC 9812]
 gi|320448429|gb|EFW89170.1| thymidylate synthase [Streptococcus equinus ATCC 9812]
          Length = 295

 Score =  188 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 26/265 (9%)

Query: 8   LRHVIKFGSDRRDRTGV-------GTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ ++  G    +   V        ++   G    +DLS+G FP+ T + +  KS + E+
Sbjct: 28  IKKIMDEGVFSENARPVYQSGGQANSKYVTGAFAEYDLSRGEFPITTLRPIPIKSAIREI 87

Query: 60  LWFLRGDSN--VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  +N       ++ V  W++W  D  G +G  YG   +          D I  I+
Sbjct: 88  FWIYQDQTNDLSVLNDKYNVKYWNDWEVDGTGTIGERYGAVVKKH--------DIIRKIL 139

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L A+P++RR+++S W+    +    L PC     + V     +  L   L QRS D+ 
Sbjct: 140 KQLEANPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDGDIYLDATLTQRSNDML 199

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 200 VSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAKELLRREPTDCKPRL 259

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254
           ++N P+  D    + EDF L  Y+P
Sbjct: 260 VLNVPDGTDFFDIKPEDFELVDYDP 284


>gi|327470119|gb|EGF15583.1| thymidylate synthase [Streptococcus sanguinis SK330]
          Length = 279

 Score =  188 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I+ I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT-LPQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCYPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFDLLDYNPVKPQLKFDLAI 279


>gi|325978449|ref|YP_004288165.1| thymidylate synthase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325178377|emb|CBZ48421.1| thyA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 279

 Score =  188 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRRDRTGV-------GTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G    +   V        ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEEGVFSENARPVYQSGGQANSKYVTGAFAEYDLSKGEFPITTLRPIPIKSAIREI 71

Query: 60  LWFLRGDSN--VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  +N       ++ V  W++W  D  G +G  YG   +          D I  I+
Sbjct: 72  FWIYQDQTNDLSVLNDKYNVKYWNDWEVDNSGTIGERYGAVVKKH--------DIIRKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYV----DNGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    +    L PC     + V    D   L   L QRS D+ 
Sbjct: 124 KQLEENPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDDEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   LSR      P++
Sbjct: 184 VSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCKPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  D    + EDF L  YEP    +   +++
Sbjct: 244 VLNVPDGTDFFDIKPEDFELVDYEPVKPQLKFDLAI 279


>gi|324991230|gb|EGC23164.1| thymidylate synthase [Streptococcus sanguinis SK353]
          Length = 296

 Score =  188 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 29  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 88

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I+ I+
Sbjct: 89  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 140

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 141 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 200

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L +M+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 201 VAHHINAMQYVALQIMIAKHFGWKIGKFFYFINNLHIYDNQFEQAEELLCREPSDCHPRL 260

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 261 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 296


>gi|309797905|ref|ZP_07692286.1| thymidylate synthase [Escherichia coli MS 145-7]
 gi|308118513|gb|EFO55775.1| thymidylate synthase [Escherichia coli MS 145-7]
          Length = 316

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 93/310 (30%), Positives = 134/310 (43%), Gaps = 87/310 (28%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW 101
            PL++ K V+ K ++ EL W+L+G  N+ +L  +GV IWD WAD++G+LGP+YG QWR W
Sbjct: 7   VPLISGKAVNLKPLLVELEWYLKGTGNIQFLKDNGVKIWDAWADENGDLGPVYGKQWRRW 66

Query: 102 PDYD----------------------------------GNVIDQISSIVQSLRADPYSRR 127
            D                                       IDQ+  IV +LR +P  RR
Sbjct: 67  EDTRIVSHSEYLSKIATFRERGYKVEGYLGISEDRVVLSREIDQLQRIVDTLRMNPTDRR 126

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFY---------------------------------- 153
            +++AWNV  ++ M LPPCH +F  +                                  
Sbjct: 127 IMLNAWNVGELEDMKLPPCHFVFSLWSRELDFETRLTMATDIGLQHSRLGYESIYTKMLY 186

Query: 154 -----------------VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196
                            +    L+  L QRS D F+G+PFNIA Y +LT  LA + G   
Sbjct: 187 DLEIDGSVTEAELDELGIPKRILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAKITGHMA 246

Query: 197 GEFIHTLGDVHLYNNHFEQADLQLSRS--PRTLPQMIINPNIVDLLSFRYEDFTLRSYEP 254
           G F+H   DVHLYNNH E     + R     + P +I      +L  F++++  +  Y P
Sbjct: 247 GAFVHFGFDVHLYNNHMEGVCELMQRQAPEHSDPVVIFPNEWSELDDFKWDEILILGYAP 306

Query: 255 HAAILAKVSV 264
              I   V+V
Sbjct: 307 LPWIKVPVAV 316


>gi|325694584|gb|EGD36493.1| thymidylate synthase [Streptococcus sanguinis SK150]
          Length = 279

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D   +G  YG   +          + I  I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTCTIGQRYGAVVKKH--------NIIHKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279


>gi|325687392|gb|EGD29413.1| thymidylate synthase [Streptococcus sanguinis SK72]
          Length = 279

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I+ I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFDLLDYNPVKPQLKFDLAI 279


>gi|332361331|gb|EGJ39135.1| thymidylate synthase [Streptococcus sanguinis SK1056]
          Length = 279

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I+ I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F+QA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKIGKFFYFINNLHIYDNQFKQAEELLRREPSDCQPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFDLLDYDPVKPQLKFDLAI 279


>gi|323351648|ref|ZP_08087302.1| thymidylate synthase [Streptococcus sanguinis VMC66]
 gi|322122134|gb|EFX93860.1| thymidylate synthase [Streptococcus sanguinis VMC66]
          Length = 279

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFTEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I  I+
Sbjct: 72  LWIYQDQSNSLELLNDKYHVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIIHKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEESDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  Y P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEDFELLDYNPVKPQLKFDLAI 279


>gi|332366635|gb|EGJ44378.1| thymidylate synthase [Streptococcus sanguinis SK1059]
          Length = 279

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   L   ++ V  W++W   D G +G  YG   +          + I  I+
Sbjct: 72  LWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKH--------NIIHKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           Q L A+P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 QQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N  +  +    + EDF L  Y+P    +   +++
Sbjct: 244 VLNVSDGTNFFDIKAEDFELLDYDPVKPQLKFDLAI 279


>gi|24379388|ref|NP_721343.1| thymidylate synthase [Streptococcus mutans UA159]
 gi|62901374|sp|Q8DUI4|TYSY_STRMU RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|24377318|gb|AAN58649.1|AE014935_1 thymidylate synthase [Streptococcus mutans UA159]
          Length = 279

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ ++  G           +     ++   G    +DL+KG FP+ T + +  KS + E+
Sbjct: 12  IKKILTDGVWSEQARPKYKNGKTANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  +N   +   ++GV  W++W  K  G +G  YG   +          D ++ I+
Sbjct: 72  FWIYQDQTNELAILNDKYGVRYWNDWEVKQTGTIGERYGAIVKKH--------DIMNKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK----LSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    +K   L PC     F V   K    L   L QRS D+ 
Sbjct: 124 KQLEENPWNRRNVISLWDYEAFEKTEGLLPCAFQIMFDVRRVKGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P +
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPVVCQPHL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N PN  +    + EDF L  YEP    +   +++
Sbjct: 244 VLNVPNKTNFFDIKPEDFELLDYEPVKPQLKFDLAI 279


>gi|56808901|ref|ZP_00366610.1| COG0207: Thymidylate synthase [Streptococcus pyogenes M49 591]
 gi|94990255|ref|YP_598355.1| thymidylate synthase [Streptococcus pyogenes MGAS10270]
 gi|94994176|ref|YP_602274.1| thymidylate synthase [Streptococcus pyogenes MGAS10750]
 gi|50903125|gb|AAT86840.1| Thymidylate synthase [Streptococcus pyogenes MGAS10394]
 gi|71802428|gb|AAX71781.1| thymidylate synthase [Streptococcus pyogenes MGAS6180]
 gi|94543763|gb|ABF33811.1| Thymidylate synthase [Streptococcus pyogenes MGAS10270]
 gi|94547684|gb|ABF37730.1| Thymidylate synthase [Streptococcus pyogenes MGAS10750]
          Length = 287

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 28/266 (10%)

Query: 8   LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           ++ +I  G          +  RT   ++   G    +DL+KG FP+ T + +  KS + E
Sbjct: 20  IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 78

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
           L W  +  SN   +    + V  W+EW  D+   +G  YG   +          D IS I
Sbjct: 79  LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 130

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170
           ++ L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+
Sbjct: 131 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 190

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229
            +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F+QA   L R P    P+
Sbjct: 191 LVAHHINAMQYVALQMMIAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 250

Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254
           +++N P+  +    + +DF L++Y+P
Sbjct: 251 LVLNVPDGTNFFDIKPDDFELQNYDP 276


>gi|21904330|gb|AAM79208.1| putative thymidylate synthase [Streptococcus pyogenes MGAS315]
          Length = 287

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 28/266 (10%)

Query: 8   LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           ++ +I  G          +  RT   ++   G    +DL+KG FP+ T + +  KS + E
Sbjct: 20  IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 78

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
           L W  +  SN   +    + V  W+EW  D+   +G  YG   +          D IS I
Sbjct: 79  LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 130

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170
           ++ L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+
Sbjct: 131 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 190

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229
            +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F+QA   L R P    P+
Sbjct: 191 LVAHHINAMQYVALQMMIAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 250

Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254
           +++N P+  +    + +DF L++Y+P
Sbjct: 251 LVLNVPDRTNFFDIKPDDFELQNYDP 276


>gi|306827521|ref|ZP_07460804.1| thymidylate synthase [Streptococcus pyogenes ATCC 10782]
 gi|304430319|gb|EFM33345.1| thymidylate synthase [Streptococcus pyogenes ATCC 10782]
          Length = 287

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 28/266 (10%)

Query: 8   LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           ++ +I  G          +  RT   ++   G    +DL+KG FP+ T + +  KS + E
Sbjct: 20  IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 78

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
           L W  +  SN   +    + V  W+EW  D+   +G  YG   +          D IS I
Sbjct: 79  LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 130

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170
           ++ L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+
Sbjct: 131 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 190

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229
            +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F+QA   L R P    P+
Sbjct: 191 LVAHHINAMQYVALQMMIAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 250

Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254
           +++N P+  +    + +DF L++Y+P
Sbjct: 251 LVLNVPDRTNFFDIKPDDFELQNYDP 276


>gi|19745950|ref|NP_607086.1| thymidylate synthase [Streptococcus pyogenes MGAS8232]
 gi|139473953|ref|YP_001128669.1| thymidylate synthase [Streptococcus pyogenes str. Manfredo]
 gi|161761315|ref|YP_060023.2| thymidylate synthase [Streptococcus pyogenes MGAS10394]
 gi|162139405|ref|YP_280136.2| thymidylate synthase [Streptococcus pyogenes MGAS6180]
 gi|209559235|ref|YP_002285707.1| thymidylate synthase [Streptococcus pyogenes NZ131]
 gi|25091466|sp|Q8P1D1|TYSY_STRP8 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|62901240|sp|Q5XCM3|TYSY_STRP6 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|166231738|sp|A2RF20|TYSY_STRPG RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172046110|sp|Q48U25|TYSY_STRPM RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172046224|sp|Q1JHC5|TYSY_STRPD RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172046751|sp|Q1J744|TYSY_STRPF RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|19748109|gb|AAL97585.1| putative thymidylate synthase [Streptococcus pyogenes MGAS8232]
 gi|134272200|emb|CAM30446.1| thymidylate synthase [Streptococcus pyogenes str. Manfredo]
 gi|209540436|gb|ACI61012.1| Thymidylate synthase [Streptococcus pyogenes NZ131]
          Length = 279

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 28/266 (10%)

Query: 8   LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           ++ +I  G          +  RT   ++   G    +DL+KG FP+ T + +  KS + E
Sbjct: 12  IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 70

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
           L W  +  SN   +    + V  W+EW  D+   +G  YG   +          D IS I
Sbjct: 71  LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 122

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170
           ++ L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+
Sbjct: 123 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 182

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229
            +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F+QA   L R P    P+
Sbjct: 183 LVAHHINAMQYVALQMMIAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 242

Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254
           +++N P+  +    + +DF L++Y+P
Sbjct: 243 LVLNVPDGTNFFDIKPDDFELQNYDP 268


>gi|33620591|ref|NP_891806.1| dTMP (thymidylate) synthase [Enterobacteria phage RB49]
 gi|33348058|gb|AAQ15459.1| dTMP (thymidylate) synthase [Enterobacteria phage RB49]
          Length = 410

 Score =  185 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 65/158 (41%), Positives = 96/158 (60%), Gaps = 4/158 (2%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+ ++++ ++ +P  RR I+ +WNV       L  CH   QFYV+ GKLSC  +QRS D
Sbjct: 254 DQLQNVIEQIKNNPTDRRIIIDSWNVQGTHNAVLGVCHPFVQFYVNEGKLSCMWFQRSVD 313

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
            FLG+PFN+ASY+LLT ++A +   + GE I + GD H+Y NHF+Q   QLSR P   P 
Sbjct: 314 SFLGLPFNVASYALLTHIIAKMCDLEVGELIFSGGDTHIYKNHFDQVMEQLSRVPFDKPT 373

Query: 230 MIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKVSV 264
           + + P    L        +DF + +Y+ H AI A+++V
Sbjct: 374 IEL-PEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 410



 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 19/133 (14%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL LLR V+  G  R DRTGVGT S FG +MR DLSKGFPLLTTKK+   SV+ ELL
Sbjct: 1   MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATASVIGELL 60

Query: 61  WFLRGDSNVSYLH--------RHGVSIWDEWADKDGE----------LGPIYGVQWRSWP 102
           WF+ G  +   L              IW        E          +G +YG+ WR  P
Sbjct: 61  WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMAWRRKP 120

Query: 103 DYDGNVIDQISSI 115
            +    I +I  +
Sbjct: 121 IHPHGEI-KIKRV 132


>gi|15674907|ref|NP_269081.1| thymidylate synthase [Streptococcus pyogenes M1 GAS]
 gi|28896164|ref|NP_802514.1| thymidylate synthase [Streptococcus pyogenes SSI-1]
 gi|71910501|ref|YP_282051.1| thymidylate synthase [Streptococcus pyogenes MGAS5005]
 gi|161485748|ref|NP_664405.2| thymidylate synthase [Streptococcus pyogenes MGAS315]
 gi|54039800|sp|P67052|TYSY_STRP3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|54042285|sp|P67051|TYSY_STRP1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|13622048|gb|AAK33802.1| putative thymidylate synthase [Streptococcus pyogenes M1 GAS]
 gi|28811414|dbj|BAC64347.1| putative thymidylate synthase [Streptococcus pyogenes SSI-1]
 gi|71853283|gb|AAZ51306.1| thymidylate synthase [Streptococcus pyogenes MGAS5005]
          Length = 279

 Score =  185 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 28/266 (10%)

Query: 8   LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           ++ +I  G          +  RT   ++   G    +DL+KG FP+ T + +  KS + E
Sbjct: 12  IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 70

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
           L W  +  SN   +    + V  W+EW  D+   +G  YG   +          D IS I
Sbjct: 71  LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 122

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170
           ++ L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+
Sbjct: 123 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 182

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229
            +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F+QA   L R P    P+
Sbjct: 183 LVAHHINAMQYVALQMMIAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 242

Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254
           +++N P+  +    + +DF L++Y+P
Sbjct: 243 LVLNVPDRTNFFDIKPDDFELQNYDP 268


>gi|319939274|ref|ZP_08013637.1| thymidylate synthase [Streptococcus anginosus 1_2_62CV]
 gi|319811670|gb|EFW07946.1| thymidylate synthase [Streptococcus anginosus 1_2_62CV]
          Length = 279

 Score =  185 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRRD-------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +R ++  G    +            ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IRKILTEGVFSENARPRYKNGKVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +    + V  W++W   D   +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLDILEEKYNVHYWNDWEVGDTRTIGLRYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLEINPWNRRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT-LPQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P   LP++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPTDCLPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + E+F L  Y P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAENFELVDYIPVKPQLKFDLAI 279


>gi|290580609|ref|YP_003485001.1| thymidylate synthase [Streptococcus mutans NN2025]
 gi|254997508|dbj|BAH88109.1| thymidylate synthase [Streptococcus mutans NN2025]
          Length = 279

 Score =  185 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ ++  G           +     ++   G    +DL+KG FP+ T + +  KS + E+
Sbjct: 12  IKKILTDGVWSEQARPKYKNGKTANSKYITGAFAEYDLAKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLH--RHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  +N   +   ++GV  W++W  K  G +G  YG   +          D ++ I+
Sbjct: 72  FWIYQDQTNELAILNDKYGVRYWNDWEVKQTGTIGERYGAIVKKH--------DIMNKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    +K   L PC     F V        L   L QRS D+ 
Sbjct: 124 KQLEENPWNRRNVISLWDYEAFEKTEGLLPCAFQTMFDVRRVNGEIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP-RTLPQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P +
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAEELLRREPVVCQPHL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N PN  +    + EDF L  YEP    +   +++
Sbjct: 244 VLNVPNKTNFFDIKPEDFELLDYEPVKPQLKFDLAI 279


>gi|291529718|emb|CBK95304.1| Thymidylate synthase [Eubacterium rectale M104/1]
          Length = 290

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 82/277 (29%), Positives = 123/277 (44%), Gaps = 30/277 (10%)

Query: 4   YLDL-LRHVIKFGSDR-------RDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKS 54
           Y  L L  ++K G+          D     T S      ++DLSKG  P+ T + + WKS
Sbjct: 11  YHKLVLNKILKEGTLDINPRPHYSDGLPAHTYSINHIMQQYDLSKGECPVETLRPIAWKS 70

Query: 55  VVHELLWFLRGDSN-VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            V E+LW  +  SN ++ LH  G+  WD+W   DG +G  YG   +          + ++
Sbjct: 71  AVKEILWIYQMQSNKINDLHEMGIKYWDDWDIGDGTIGCRYGATVKRH--------NLMN 122

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDK------MALPPCHCLFQFYVDNGK----LSCQL 163
            ++  L+ DP+ RRHI++ W               L PC     + V  G+    L   +
Sbjct: 123 KLLNGLKQDPFGRRHIMNMWQEDDFSDETGGTTKGLNPCCYETIWNVRWGEDGLYLDMLM 182

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
            QRS D  +    N   Y  L +M+A V GF+ G F H + +V +Y+ H       L+R 
Sbjct: 183 NQRSSDYEISCAINELQYIALQLMVAKVCGFKPGMFTHVIENVQIYDRHVNNVKTLLTRE 242

Query: 224 P-RTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAIL 259
             R  PQ+I+N +  D   F  +DF L  Y P   I 
Sbjct: 243 SVRCCPQLILNTDKTDFYKFTIDDFVLTDY-PVDKIK 278


>gi|94988375|ref|YP_596476.1| thymidylate synthase [Streptococcus pyogenes MGAS9429]
 gi|94992257|ref|YP_600356.1| thymidylate synthase [Streptococcus pyogenes MGAS2096]
 gi|94541883|gb|ABF31932.1| thymidylate synthase [Streptococcus pyogenes MGAS9429]
 gi|94545765|gb|ABF35812.1| Thymidylate synthase [Streptococcus pyogenes MGAS2096]
          Length = 287

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 28/266 (10%)

Query: 8   LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           ++ +I  G          +  RT   ++   G    +DL+KG FP+ T + +  KS + E
Sbjct: 20  IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 78

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
           L W  +  SN   +    + V  W+EW  D+   +G  YG   +          D IS I
Sbjct: 79  LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 130

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170
           ++ L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+
Sbjct: 131 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 190

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229
            +    N   Y  L MM A   G++ G+F + + ++H+Y+N F+QA   L R P    P+
Sbjct: 191 LVAHHINAMQYVALQMMFAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 250

Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254
           +++N P+  +    + +DF L++Y+P
Sbjct: 251 LVLNVPDGTNFFDIKPDDFELQNYDP 276


>gi|157311536|ref|YP_001469579.1| Td dTMP (thymidylate) synthase [Enterobacteria phage Phi1]
 gi|149380740|gb|ABR24745.1| Td dTMP (thymidylate) synthase [Enterobacteria phage Phi1]
          Length = 406

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 65/158 (41%), Positives = 96/158 (60%), Gaps = 4/158 (2%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQ+ ++++ ++ +P  RR I+ +WNV       L  CH   QFYV+ GKLSC  +QRS D
Sbjct: 250 DQLQNVIEQIKNNPTDRRIIIDSWNVQGTHNAVLGVCHPFVQFYVNEGKLSCMWFQRSVD 309

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
            FLG+PFN+ASY+LLT ++A +   + GE I + GD H+Y NHF+Q   QLSR P   P 
Sbjct: 310 SFLGLPFNVASYALLTHIIAKMCDLEVGELIFSGGDTHIYKNHFDQVMEQLSRVPFDKPT 369

Query: 230 MIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKVSV 264
           + + P    L        +DF + +Y+ H AI A+++V
Sbjct: 370 IEL-PEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 406



 Score =  105 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 19/133 (14%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL LLR V+  G  R DRTGVGT S FG +MR DLSKGFPLLTTKK+   SV+ ELL
Sbjct: 1   MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATSSVIGELL 60

Query: 61  WFLRGDSNVSYLH--------RHGVSIWDEWADKDGE----------LGPIYGVQWRSWP 102
           WF+ G  +   L              IW        E          +G +YG+ WR  P
Sbjct: 61  WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMSWRRKP 120

Query: 103 DYDGNVIDQISSI 115
            +    I +I  +
Sbjct: 121 IHPHGEI-KIKRV 132


>gi|172046221|sp|Q1JM80|TYSY_STRPC RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|172046745|sp|Q1JC96|TYSY_STRPB RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
          Length = 279

 Score =  185 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 28/266 (10%)

Query: 8   LRHVIKFG--------SDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           ++ +I  G          +  RT   ++   G    +DL+KG FP+ T + +  KS + E
Sbjct: 12  IQKIINEGSLSEQARPKYKDGRT-AHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKE 70

Query: 59  LLWFLRGDSNVSYLHR--HGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSI 115
           L W  +  SN   +    + V  W+EW  D+   +G  YG   +          D IS I
Sbjct: 71  LFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKH--------DIISKI 122

Query: 116 VQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDV 170
           ++ L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+
Sbjct: 123 LKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDI 182

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQ 229
            +    N   Y  L MM A   G++ G+F + + ++H+Y+N F+QA   L R P    P+
Sbjct: 183 LVAHHINAMQYVALQMMFAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPK 242

Query: 230 MIIN-PNIVDLLSFRYEDFTLRSYEP 254
           +++N P+  +    + +DF L++Y+P
Sbjct: 243 LVLNVPDGTNFFDIKPDDFELQNYDP 268


>gi|125623803|ref|YP_001032286.1| thymidylate synthase [Lactococcus lactis subsp. cremoris MG1363]
 gi|18539502|gb|AAL74419.1|AF462070_1 thymidylate synthase [Lactococcus lactis subsp. cremoris MG1363]
 gi|149513|gb|AAA25221.1| thymidylate synthase (EC 2.1.1.45) [Lactococcus lactis]
 gi|124492611|emb|CAL97556.1| ThyA protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070573|gb|ADJ59973.1| thymidylate synthase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 279

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +++++  G           D     ++   G  + +DL KG FP+ T + +  KS + EL
Sbjct: 12  IQNILDNGVFSENARPKYKDGQMANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKEL 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           +W  +  ++   +    +GV  W EW   DG +G  YG   + +        + I  +++
Sbjct: 72  MWIYQDQTSELSVLEEKYGVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLE 123

Query: 118 SLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVF 171
            L  +P++RR+I++ W     ++   L PC     F V   K     L   L QRS D+ 
Sbjct: 124 GLAKNPWNRRNIINLWQYEDFEETEGLLPCAFQTMFDVRREKDGQIYLDATLIQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A    ++ G+F + + ++H+Y+N FEQA+  + R+     P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKVGKFFYFVNNLHIYDNQFEQANELMKRTASEKEPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  YEP    +   +++
Sbjct: 244 VLNVPDGTNFFDIKPEDFELVDYEPVKPQLKFDLAI 279


>gi|116512335|ref|YP_809551.1| thymidylate synthase [Lactococcus lactis subsp. cremoris SK11]
 gi|123125483|sp|Q02Y43|TYSY_LACLS RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|116107989|gb|ABJ73129.1| thymidylate synthase [Lactococcus lactis subsp. cremoris SK11]
          Length = 279

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +++++  G           D     ++   G  + +DL KG FP+ T + +  KS + EL
Sbjct: 12  IQNILDNGVFSENARPKYKDGQMANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKEL 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           +W  +  ++   +    +GV  W EW   DG +G  YG   + +        + I  +++
Sbjct: 72  MWIYQDQTSELSVLEEKYGVKYWGEWRIGDGTIGQRYGATVKKY--------NIIGKLLE 123

Query: 118 SLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVF 171
            L  +P++RR+I++ W     ++   L PC     F V   K     L   L QRS D+ 
Sbjct: 124 GLAKNPWNRRNIINLWQYEDFEETEGLLPCAFQTMFDVRREKDGQIYLDATLIQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A    ++ G+F + + ++H+Y+N FEQA+  + R+     P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKVGKFFYFVNNLHIYDNQFEQANELMKRTASEKEPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  YEP    +   +++
Sbjct: 244 VLNVPDGTNFFDIKPEDFELVDYEPVKPQLKFDLAI 279


>gi|315221690|ref|ZP_07863606.1| thymidylate synthase [Streptococcus anginosus F0211]
 gi|315189177|gb|EFU22876.1| thymidylate synthase [Streptococcus anginosus F0211]
          Length = 279

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRRD-------RTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +R ++  G    +            ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  IRKILHEGVFSENARPRYKNGKVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +    + V  W++W   D   +G  YG   +          D I+ I+
Sbjct: 72  LWIYQDQSNSLDILEEKYNVHYWNDWEVGDTRTIGLRYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+I+S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLEINPWNRRNIISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQAKELLRREPTNCTPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + E F L  Y+P    +   +++
Sbjct: 244 VLNVPDGTNFFDIKAEYFELVDYDPVKPQLKFDLAI 279


>gi|329117733|ref|ZP_08246450.1| thymidylate synthase [Streptococcus parauberis NCFD 2020]
 gi|326908138|gb|EGE55052.1| thymidylate synthase [Streptococcus parauberis NCFD 2020]
          Length = 279

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 27/278 (9%)

Query: 6   DLLRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57
           D ++ +++ G           D     ++   G    +DLSKG FP+ T + +  KS + 
Sbjct: 10  DNIQKIMEQGVYSEQARPKYKDGKTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIK 69

Query: 58  ELLWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISS 114
           ELLW  +  SN   +    + V  W++W   D   +G  YG   +          D I+ 
Sbjct: 70  ELLWIYQDQSNSLDILEEKYNVHYWNDWEVGDTRTIGQRYGAVVKKH--------DIINK 121

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDN----GKLSCQLYQRSGD 169
           I++ L  +P++RR+++S W+    ++   L PC     F V        L   L QRS D
Sbjct: 122 ILKQLEDNPWNRRNVISLWDYQAFEESEGLLPCAFQTMFDVRRVDGTIYLDATLVQRSND 181

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT-LP 228
           + +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F QA+  L R     +P
Sbjct: 182 MLVAHHINAMQYVALQMMVAKHFGWKVGKFFYFINNLHIYDNQFPQAEELLRRKESDCMP 241

Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           Q+++N P+  +    + EDF L  Y P    +   +++
Sbjct: 242 QLMLNVPDGTNFFDIKAEDFELIDYSPVKPQLKFDLAI 279


>gi|326407008|gb|ADZ64079.1| thymidylate synthase [Lactococcus lactis subsp. lactis CV56]
          Length = 279

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +++++  G           D     ++   G  + +DL KG FP+ T + +  KS + EL
Sbjct: 12  IQNILDNGVFSENARPKYKDGQTANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKEL 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           +W  +  ++   +    +GV  W EW   DG +G  YG   + +        + I  ++ 
Sbjct: 72  MWIYQDQTSELAILEEKYGVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLD 123

Query: 118 SLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVF 171
            L  +P++RR+I++ W     ++   L PC     F V   +     L   L QRS D+ 
Sbjct: 124 GLAKNPWNRRNIINLWQYEDFEETEGLLPCAFQTMFDVRCEQDGQIYLDATLIQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A    ++ G+F + + ++H+Y+N FEQA+  + R+     P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKVGKFFYFVNNLHIYDNQFEQANELVKRTASDKEPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  YEP    +   +++
Sbjct: 244 VLNVPDGTNFFDIKPEDFELVDYEPVKPQLKFDLAI 279


>gi|310659774|ref|YP_003937495.1| thymidylate synthase (ts) (tsase) [Clostridium sticklandii DSM 519]
 gi|308826552|emb|CBH22590.1| Thymidylate synthase (TS) (TSase) [Clostridium sticklandii]
          Length = 277

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 75/265 (28%), Positives = 119/265 (44%), Gaps = 24/265 (9%)

Query: 6   DLLRHVIKFGSDRR---------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSV 55
           DL   +I  G+            D T   T         +D+SKG FPL+T + + WKS 
Sbjct: 10  DLCTRIINEGTSTDGEKVRPVYKDNTPSHTLFVTQVFEEYDISKGEFPLITYRPISWKSA 69

Query: 56  VHELLWFLRGDSNVSYL--HRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
           V E+LW  +  ++   +   ++ +  WDEW   DG +G  YG   + +        D ++
Sbjct: 70  VKEILWIYQDQTSSLNVLKEKYDIHWWDEWNIGDGTIGQRYGATVKKY--------DLVN 121

Query: 114 SIVQSLRADPYSRRHIVSAWNVAL-IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
            +++SL+  PY RRHI++ +     ++   L PC     + V    L   L QRS DV +
Sbjct: 122 KLLKSLKEIPYGRRHIINLYQYEDFLETDGLYPCAMETHWSVRGDFLDVTLIQRSSDVAV 181

Query: 173 GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS---PRTLPQ 229
               N   Y+ L MM+A  +G   G+  H + + H+Y+ H +     L R      + P 
Sbjct: 182 ANCINKIQYTALLMMVARHVGLSPGKLCHYVHNAHIYDRHIDDVISLLKRDVGKEISHPS 241

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEP 254
           +I+N    D  +F   DF L  Y P
Sbjct: 242 LILNSQKTDFYNFTINDFDLIDYNP 266


>gi|15673523|ref|NP_267697.1| thymidylate synthase [Lactococcus lactis subsp. lactis Il1403]
 gi|281492105|ref|YP_003354085.1| thymidylate synthase [Lactococcus lactis subsp. lactis KF147]
 gi|13638515|sp|P19368|TYSY_LACLA RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|12724542|gb|AAK05639.1|AE006385_1 thymidylate synthase [Lactococcus lactis subsp. lactis Il1403]
 gi|13310416|gb|AAK18280.1|AF336368_1 thymidylate synthase [Lactococcus lactis subsp. lactis]
 gi|281375788|gb|ADA65285.1| Thymidylate synthase [Lactococcus lactis subsp. lactis KF147]
          Length = 279

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +++++  G           D     ++   G  + +DL KG FP+ T + +  KS + EL
Sbjct: 12  IQNILDNGVFSENARPKYKDGQTANSKYVTGSFVTYDLQKGEFPITTLRPIPIKSAIKEL 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
           +W  +  ++   +    +GV  W EW   DG +G  YG   + +        + I  ++ 
Sbjct: 72  MWIYQDQTSELAILEEKYGVKYWGEWGIGDGTIGQRYGATVKKY--------NIIGKLLD 123

Query: 118 SLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNGK-----LSCQLYQRSGDVF 171
            L  +P++RR+I++ W     ++   L PC     F V   +     L   L QRS D+ 
Sbjct: 124 GLAKNPWNRRNIINLWQYEDFEETEGLLPCAFQTMFDVRREQDGQIYLDATLIQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A    ++ G+F + + ++H+Y+N FEQA+  + R+     P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKVGKFFYFVNNLHIYDNQFEQANELVKRTASDKEPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           ++N P+  +    + EDF L  YEP    +   +++
Sbjct: 244 VLNVPDGTNFFDIKPEDFELVDYEPVKPQLKFDLAI 279


>gi|218678176|ref|ZP_03526073.1| thymidylate synthase [Rhizobium etli CIAT 894]
          Length = 130

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 80/119 (67%), Positives = 102/119 (85%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDLL HV++ GSDR DRTG GTRS FGYQMRFDL +GFP+LTTKK+H +S++HELL
Sbjct: 1   MKQYLDLLAHVMEKGSDRGDRTGTGTRSVFGYQMRFDLQEGFPVLTTKKLHLRSIIHELL 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL 119
           WFL+GD+N+ YL  +GVSIWDEWAD++G+LGP+YG QWRSWP  DG  +DQI+++V+ +
Sbjct: 61  WFLKGDTNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHVDQIANLVKGI 119


>gi|25011427|ref|NP_735822.1| thymidylate synthase [Streptococcus agalactiae NEM316]
 gi|76787961|ref|YP_329956.1| thymidylate synthase [Streptococcus agalactiae A909]
 gi|77411173|ref|ZP_00787525.1| thymidylate synthase [Streptococcus agalactiae CJB111]
 gi|77414071|ref|ZP_00790240.1| thymidylate synthase [Streptococcus agalactiae 515]
 gi|62901376|sp|Q8E4L6|TYSY_STRA3 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|123601631|sp|Q3K0J7|TYSY_STRA1 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|24412965|emb|CAD47044.1| thymidylate synthase [Streptococcus agalactiae NEM316]
 gi|76563018|gb|ABA45602.1| thymidylate synthase [Streptococcus agalactiae A909]
 gi|77159869|gb|EAO71011.1| thymidylate synthase [Streptococcus agalactiae 515]
 gi|77162791|gb|EAO73750.1| thymidylate synthase [Streptococcus agalactiae CJB111]
          Length = 279

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 26/267 (9%)

Query: 6   DLLRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57
           D +  ++  G           +     ++   G    +DLSKG FP+ T + +  KS + 
Sbjct: 10  DNITKIMSEGVFSEQARPRYKNGEMANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIK 69

Query: 58  ELLWFLRGDSN--VSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISS 114
           E+ W  +  +N  V    ++GV+ W++W     G +G  YG   +          + IS 
Sbjct: 70  EIFWIYQDQTNDLVVLNDKYGVTYWNDWEVGHTGTIGQRYGAVVKKH--------NIISK 121

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD--NGKLSC--QLYQRSGD 169
           +++ L  +P++RR+++S W+    ++   L PC     F V   NG+L     L QRS D
Sbjct: 122 LLKQLEDNPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVNGELYLDATLTQRSND 181

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228
           + +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P
Sbjct: 182 MLVAHHINAMQYVALQMMIAKHFGWRVGKFFYFINNLHIYDNQFEQAQELLKRQPSECNP 241

Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP 254
           ++++N P+  D    + +DF L  Y+P
Sbjct: 242 KLVLNVPDGTDFFDIKPDDFALVDYDP 268


>gi|22537462|ref|NP_688313.1| thymidylate synthase [Streptococcus agalactiae 2603V/R]
 gi|76798605|ref|ZP_00780833.1| thymidylate synthase [Streptococcus agalactiae 18RS21]
 gi|77409178|ref|ZP_00785890.1| thymidylate synthase [Streptococcus agalactiae COH1]
 gi|62901375|sp|Q8DZ07|TYSY_STRA5 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|22534340|gb|AAN00186.1|AE014252_9 thymidylate synthase [Streptococcus agalactiae 2603V/R]
 gi|76586039|gb|EAO62569.1| thymidylate synthase [Streptococcus agalactiae 18RS21]
 gi|77172224|gb|EAO75381.1| thymidylate synthase [Streptococcus agalactiae COH1]
 gi|319745294|gb|EFV97612.1| thymidylate synthase [Streptococcus agalactiae ATCC 13813]
          Length = 279

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 26/267 (9%)

Query: 6   DLLRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57
           D +  ++  G           +     ++   G    +DLSKG FP+ T + +  KS + 
Sbjct: 10  DNITKIMSEGVFSEQARPRYKNGEMANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIK 69

Query: 58  ELLWFLRGDSN--VSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISS 114
           E+ W  +  +N       ++GV+ W++W     G +G  YG   +          + IS 
Sbjct: 70  EIFWIYQDQTNDLAVLNDKYGVTYWNDWEVGHTGTIGQRYGAVVKKH--------NIISK 121

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD--NGKLSC--QLYQRSGD 169
           +++ L  +P++RR+++S W+    ++   L PC     F V   NG+L     L QRS D
Sbjct: 122 LLKQLEDNPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVNGELYLDATLTQRSND 181

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228
           + +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA   L R P    P
Sbjct: 182 MLVAHHINAMQYVALQMMIAKHFGWRVGKFFYFINNLHIYDNQFEQAQELLKRQPSECNP 241

Query: 229 QMIIN-PNIVDLLSFRYEDFTLRSYEP 254
           ++++N P+  D    + +DF L  Y+P
Sbjct: 242 KLVLNVPDGTDFFDIKPDDFALVDYDP 268


>gi|294646594|ref|ZP_06724226.1| thymidylate synthase [Bacteroides ovatus SD CC 2a]
 gi|292638036|gb|EFF56422.1| thymidylate synthase [Bacteroides ovatus SD CC 2a]
          Length = 110

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/110 (57%), Positives = 82/110 (74%)

Query: 155 DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
            +G+LS QLYQRS D+FLG+PFNIASY+LL  M+A V G + G+F+HT GD H+Y NH E
Sbjct: 1   ADGRLSLQLYQRSADIFLGVPFNIASYALLLQMMAQVTGLKAGDFVHTFGDAHIYLNHLE 60

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Q  LQLSR PR LPQM INP++ ++  F++EDF L +Y+PH  I   V+V
Sbjct: 61  QVKLQLSREPRPLPQMKINPDVKNIFDFKFEDFELVNYDPHPHIAGAVAV 110


>gi|225870473|ref|YP_002746420.1| thymidylate synthase [Streptococcus equi subsp. equi 4047]
 gi|225699877|emb|CAW93768.1| thymidylate synthase [Streptococcus equi subsp. equi 4047]
          Length = 279

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 26/265 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           +     ++   G    +DLSKG FP+ T + +  KS + EL
Sbjct: 12  IKKIMEEGVFSEQARPRYKNGQTANSKYITGAFAEYDLSKGEFPITTLRSIPIKSAIKEL 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  SN   +  +++ V  W+EW   +   +G  YG   +          D IS I+
Sbjct: 72  FWIYQDQSNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAIVKKH--------DIISKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD--NGKLSC--QLYQRSGDVF 171
           + L  +P++RR+++S W+    ++   L PC     F V   +G+L     L QRS D+ 
Sbjct: 124 KQLEDNPWNRRNVISLWDYEAFEESEGLLPCAFQVMFDVRRVDGELYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L +M+A   G++ G+F + + ++H+Y+N F QA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQLMIAKHFGWKAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254
           +++ P+  D    R EDF L+ Y P
Sbjct: 244 LLHVPDGTDFFDIRPEDFELQDYYP 268


>gi|225868468|ref|YP_002744416.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus]
 gi|225701744|emb|CAW99116.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus]
          Length = 279

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 127/265 (47%), Gaps = 26/265 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           +     ++   G    +DLSKG FP+ T + +  KS + EL
Sbjct: 12  IKKIMEEGVFSEQARPRYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKEL 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  SN   +  +++ V  W+EW   +   +G  YG   +          D IS I+
Sbjct: 72  FWIYQDQSNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAIVKKH--------DIISKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD--NGKLSC--QLYQRSGDVF 171
           + L  +P++RR+++S W+    +    L PC     F V   +G+L     L QRS D+ 
Sbjct: 124 KQLEDNPWNRRNVISLWDYEAFEVSEGLLPCAFQVMFDVRRVDGELYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L +M+A   G++ G+F + + ++H+Y+N F QA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQLMIAKHFGWRAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254
           +++ P+  D    R EDF L+ Y P
Sbjct: 244 LLHVPDGTDFFDIRPEDFELQDYHP 268


>gi|312865238|ref|ZP_07725466.1| thymidylate synthase [Streptococcus downei F0415]
 gi|311099349|gb|EFQ57565.1| thymidylate synthase [Streptococcus downei F0415]
          Length = 279

 Score =  178 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 27/276 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  ++  G           +     ++   G   ++DLSKG FP+ T + +  KS + E+
Sbjct: 12  IETILTQGVMSEQARPKYKNGQTANSKYITGSFAQYDLSKGEFPITTLRPIPIKSAIKEI 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  SN   L   ++ V  W++W   D G +G  YG   +          D I+ I+
Sbjct: 72  FWIYQDQSNDLDLLNEKYQVKYWNDWEVGDTGTIGQRYGAVVKKH--------DIINKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLAENPWNRRNVISLWDYEAFEESEGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L MM+A   G++ G+F + + ++H+Y+N F+QA   L+R+P    P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFDQAQELLNRTPADKEPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP-HAAILAKVSV 264
           I++ P+  +    + EDF L  YEP    +   +++
Sbjct: 244 ILDVPDGTNFFDIKPEDFQLLDYEPVKPQLKFDLAI 279


>gi|32709481|gb|AAP86759.1| thymidylate synthase [Enterobacteria phage TuIa]
          Length = 166

 Score =  178 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 12/166 (7%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           Q+   +  ++A P  RR IVSAWN A ID+MALPPCH  +QF V NG L  Q YQRS DV
Sbjct: 1   QLVKTIDRIKALPNDRRQIVSAWNPAEIDQMALPPCHMFYQFNVRNGHLDLQWYQRSVDV 60

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
           FLG+PFNIASY+ LT ++A +     G+ + + G+ H+Y+NH EQ    + R P+ L  +
Sbjct: 61  FLGLPFNIASYAALTHIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCKEVIRREPKELCSL 120

Query: 231 IIN--------PNIVDLL----SFRYEDFTLRSYEPHAAILAKVSV 264
            I         P  + +     +  + DF L++YE H AI AK++V
Sbjct: 121 EITWPSNFENWPTKIQMDWVTGTMTHTDFVLKNYESHPAIKAKMAV 166


>gi|225696039|gb|ACO06795.1| thymidylate synthase [Lemur catta]
          Length = 158

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 77/158 (48%), Positives = 100/158 (63%), Gaps = 20/158 (12%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK------------DGE 89
           FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +            +G+
Sbjct: 1   FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRGFLDGLGFSTRGEGD 60

Query: 90  LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  M
Sbjct: 61  LGPVYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLM 120

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           ALPPCH L QFYV NG+LSCQLYQRSGD+ LG+PFNIA
Sbjct: 121 ALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIA 158


>gi|238695118|ref|YP_002922312.1| dTMP (thymidylate) synthase [Enterobacteria phage JSE]
 gi|220029254|gb|ACL78189.1| dTMP (thymidylate) synthase [Enterobacteria phage JSE]
          Length = 407

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 5/159 (3%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV-DNGKLSCQLYQRSG 168
           DQ+  ++  ++ DPYSRR I+ +WNV       L  CH + QFYV ++ KLSC  + RS 
Sbjct: 250 DQLQKVIDMIKNDPYSRRIIIDSWNVQETHNAVLGVCHPMVQFYVSNDNKLSCLFFMRSN 309

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+FLG PFN+ASY+LLT ++A + G + GE ++  GD H+Y NHF+Q   QLSR P   P
Sbjct: 310 DLFLGNPFNVASYALLTHIIAKICGLEVGELVYQCGDCHIYKNHFDQVMEQLSRVPFDKP 369

Query: 229 QMIINPNIVDLLSF---RYEDFTLRSYEPHAAILAKVSV 264
            + + P    L        +DF + +Y+ H AI A+++V
Sbjct: 370 IIEL-PEFKSLDEVLTKTPKDFKIHNYQSHPAITAQMAV 407



 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 53/127 (41%), Positives = 64/127 (50%), Gaps = 18/127 (14%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +YL LLR V+  G  R DRTGVGT S FG +MR DLSKGFPLLTTKK+   SV+ ELL
Sbjct: 1   MKEYLKLLRDVLDNGWPREDRTGVGTLSKFGAEMRIDLSKGFPLLTTKKMATASVIGELL 60

Query: 61  WFLRGDSNVSYLH--------RHGVSIWDEWADKDGE----------LGPIYGVQWRSWP 102
           WF+ G  +   L              IW        E          +G +YG+ WR  P
Sbjct: 61  WFMEGSLDRRRLQEITRGKFDEEAFDIWRGNCLDMKEKNPLRFNGYNVGNMYGMAWRRKP 120

Query: 103 DYDGNVI 109
            +    I
Sbjct: 121 IHPHGEI 127


>gi|222152932|ref|YP_002562109.1| thymidylate synthase [Streptococcus uberis 0140J]
 gi|222113745|emb|CAR41747.1| thymidylate synthase [Streptococcus uberis 0140J]
          Length = 279

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 21/261 (8%)

Query: 7   LLRHVIKFGSDRRDRTG--VGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWFL 63
           L+  V+   +  + + G    ++   G    +DLSKG FP+ T + +  KS + ELLW  
Sbjct: 16  LMDGVLSENARPKYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKELLWIY 75

Query: 64  RGDSNVSYL--HRHGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           +  SN   +  +++ V  W++W       +G  YG   +          D ++ I++ L 
Sbjct: 76  QDQSNSLDVLENKYNVHYWNDWEVGTTRTIGQRYGAIVKKH--------DIMTKILKQLS 127

Query: 121 ADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVFLGIP 175
            +P++RR+IVS W+    ++   L PC     F V        L   L QRS D+ +   
Sbjct: 128 DNPWNRRNIVSLWDYEAFEESEGLLPCAFQTMFDVRRVNGEIYLDATLVQRSNDMLVAHH 187

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQMIIN- 233
            N   Y    MM+A   G++ G+F + + ++H+Y+N F QA+  L R      PQ+++N 
Sbjct: 188 INAMQYVAFQMMIAKHFGWKLGKFFYFVNNLHIYDNQFPQAEELLKREESDCHPQLVLNV 247

Query: 234 PNIVDLLSFRYEDFTLRSYEP 254
           P+  +    R EDF L  Y P
Sbjct: 248 PDGTNFFDIRPEDFELLDYNP 268


>gi|195978199|ref|YP_002123443.1| thymidylate synthase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974904|gb|ACG62430.1| thymidylate synthase ThyA [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 279

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 26/265 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           +     ++   G    +DLSKG FP+ T + +  KS + EL
Sbjct: 12  IKKIMEEGVFSEQARPRYKNGQTANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIKEL 71

Query: 60  LWFLRGDSNVSYL--HRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDGNVIDQISSIV 116
            W  +  SN   +  +++ V  W+EW   +   +G  YG   +          D IS I+
Sbjct: 72  FWIYQDQSNSLDVLENKYNVHYWNEWEVGQTRTIGQRYGAIVKKH--------DIISKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD--NGKLSC--QLYQRSGDVF 171
           + L  +P++RR+++S W+    ++   L PC     F V   +G+L     L QRS D+ 
Sbjct: 124 KQLEDNPWNRRNVISLWDYEAFEESEGLLPCAFQVMFDVRRVDGELYLDATLTQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-PQM 230
           +    N   Y  L +M+A   G++ G+F + + ++H+Y+N F QA   L R P    P++
Sbjct: 184 VAHHINAMQYVALQLMIAKHFGWRAGKFFYFVNNLHIYDNQFAQAKELLERQPAACQPKL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254
           +++ P+       R EDF L+ Y P
Sbjct: 244 LLHVPDGTAFFDIRPEDFELQDYHP 268


>gi|225696043|gb|ACO06797.1| thymidylate synthase [Saimiri sciureus]
          Length = 158

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 78/158 (49%), Positives = 100/158 (63%), Gaps = 20/158 (12%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89
           FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D            G+
Sbjct: 1   FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGD 60

Query: 90  LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  M
Sbjct: 61  LGPVYGFQWRHFGAEYRDMDSDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           ALPPCH L QFYV NG+LSCQLYQRSGD+ LG+PFNIA
Sbjct: 121 ALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIA 158


>gi|225696041|gb|ACO06796.1| thymidylate synthase [Macaca mulatta]
          Length = 159

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 78/159 (49%), Positives = 100/159 (62%), Gaps = 20/159 (12%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89
           FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D            G+
Sbjct: 1   FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSAREEGD 60

Query: 90  LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  M
Sbjct: 61  LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIAS
Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIAS 159


>gi|332523709|ref|ZP_08399961.1| thymidylate synthase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314973|gb|EGJ27958.1| thymidylate synthase [Streptococcus porcinus str. Jelinkova 176]
          Length = 279

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 26/265 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    ++L+   FP+ T + +  KS + EL
Sbjct: 12  IQKILETGVFSEQARPKYKDGQTANSKYLTGVFTEYNLAEDDFPITTLRPIPIKSAIKEL 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +    + V  W++W   +   +G  YG   +          D ++ I+
Sbjct: 72  LWIYQDQSNSLDVLEEKYNVHYWNDWEVGNTRTIGQRYGAVVKKH--------DIMTKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLADNPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLVQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS-PRTLPQM 230
           +    N   Y  L MM+A    ++ G+F + + ++H+Y+N F QA+  LSR      P++
Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKIGKFFYFVNNLHIYDNQFSQAEELLSREASNCKPRL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254
           ++N P+  D      EDF L  Y P
Sbjct: 244 VLNVPDGTDFFDICAEDFELVDYNP 268


>gi|119622127|gb|EAX01722.1| thymidylate synthetase, isoform CRA_g [Homo sapiens]
          Length = 186

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 20/153 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWF 62
           QYL  ++H+++ G  + DRTG GT S FG Q R+ L   FPLLTTK+V WK V+ ELLWF
Sbjct: 32  QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWF 91

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP-------- 102
           ++G +N   L   GV IWD    +D            G+LGP+YG QWR +         
Sbjct: 92  IKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMES 151

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
           DY G  +DQ+  ++ +++ +P  RR I+ AWN 
Sbjct: 152 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNP 184


>gi|225696033|gb|ACO06792.1| thymidylate synthase [Pan troglodytes]
 gi|225696035|gb|ACO06793.1| thymidylate synthase [Pan paniscus]
          Length = 159

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 20/159 (12%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89
           FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D            G+
Sbjct: 1   FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGD 60

Query: 90  LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGP+YG QWR +         DY G  +DQ+  ++ +++++P  RR I+ AWN   +  M
Sbjct: 61  LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKSNPDDRRIIMCAWNPRDLPLM 120

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNIAS
Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIAS 159


>gi|225075851|ref|ZP_03719050.1| hypothetical protein NEIFLAOT_00874 [Neisseria flavescens
           NRL30031/H210]
 gi|224952797|gb|EEG34006.1| hypothetical protein NEIFLAOT_00874 [Neisseria flavescens
           NRL30031/H210]
          Length = 309

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 34/280 (12%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY+ LL+ ++     R +RTG    +    Q     +  FP LT ++ +WKS V E+L 
Sbjct: 21  QQYVQLLKDLLDAPLVRNERTGTACHTIINPQSFTYTADDFPALTIRRSYWKSAVAEMLG 80

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDGNVI 109
           ++RG ++       G   WD  A+++             ++G +YG    S+        
Sbjct: 81  YIRGYTSAKDFRELGTKTWDANANQNPAWLANPHRAGVDDMGLVYGAVGNSFTGLS---- 136

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
              + I++++ A   +R  I S WN  + DK  L PC    QF + NG L     QRS D
Sbjct: 137 --FTDIMRAIHARQDNRGLIWSFWNPDVFDKGCLRPCMYSHQFSIVNGTLYLTSTQRSCD 194

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS--PRTL 227
           V LG+ FN+     L  ++ ++ G ++G   H + + H+Y N  +     ++    PR++
Sbjct: 195 VPLGLTFNMIQCWFLLYLVCTLTGLKFGHARHNIVNAHIYENQVDAVREMIANPLLPRSI 254

Query: 228 PQMIINP----------NIVD----LLSFRYEDFTLRSYE 253
               ++           ++      L S    DF L  Y+
Sbjct: 255 KFQHVDRMTGRVRMGVEDVDSALLFLNSCDVNDFELLGYD 294


>gi|313890613|ref|ZP_07824241.1| thymidylate synthase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121130|gb|EFR44241.1| thymidylate synthase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 279

 Score =  175 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 122/265 (46%), Gaps = 26/265 (9%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           ++ +++ G           D     ++   G    ++L++G FP+ T + +  KS + EL
Sbjct: 12  IQKILETGVFSEQARPKYKDGQTANSKYLTGVFAEYNLAEGDFPITTLRPIPIKSAIKEL 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDG-ELGPIYGVQWRSWPDYDGNVIDQISSIV 116
           LW  +  SN   +    + V  W +W   +   +G  YG   +          D ++ I+
Sbjct: 72  LWIYQDQSNSLDVLEEKYNVHYWKDWEVGNTRTIGQRYGAVVKKH--------DIMTKIL 123

Query: 117 QSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVD----NGKLSCQLYQRSGDVF 171
           + L  +P++RR+++S W+    ++   L PC     F V     +  L   L QRS D+ 
Sbjct: 124 KQLADNPWNRRNVISLWDYEAFEETEGLLPCAFQTMFDVRRVDGDIYLDATLVQRSNDML 183

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS-PRTLPQM 230
           +    N   Y  L MM+A    ++ G+F + + ++H+Y+N F QA+  L+R      P +
Sbjct: 184 VAHHINAMQYVALQMMIAKHFSWKVGKFFYFVNNLHIYDNQFSQAEELLNREASHCQPHL 243

Query: 231 IIN-PNIVDLLSFRYEDFTLRSYEP 254
           ++N P+  +      EDF L  Y+P
Sbjct: 244 VLNVPDGTNFFDIGVEDFELVDYDP 268


>gi|225696037|gb|ACO06794.1| thymidylate synthase [Gorilla gorilla]
          Length = 159

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 20/159 (12%)

Query: 42  FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GE 89
           FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D            G+
Sbjct: 1   FPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGD 60

Query: 90  LGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN   +  M
Sbjct: 61  LGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 120

Query: 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ALPPCH L QFYV N +LSCQLYQRSGD+ LG+PFNI S
Sbjct: 121 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIXS 159


>gi|326536756|ref|YP_004301187.1| Td thymidylate synthetase [Aeromonas phage 65]
 gi|312263102|gb|ADQ53358.1| Td thymidylate synthetase [Aeromonas phage 65]
          Length = 313

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 27/283 (9%)

Query: 3   QYLDLLRHVIKFGSDR-RDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           +Y +L+ +V   G+D    RTG   R+   + M +D     P+++ K+V +K  + E + 
Sbjct: 35  EYYNLVHYVYNHGTDIFNKRTGFVCRTIPTHVMVYD---RCPMISHKQVFFKMFIAEFIG 91

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYDGNVI 109
           +LRG ++       G   WD  A++            + ++G +YG   R +    G   
Sbjct: 92  YLRGYTSAKQFRDLGTRTWDANANETKAWLINPNRKGEDDMGNVYGSIARDFGA-KGGQY 150

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           D +  + + L+    +R  I++ W+ +  D+  L PC  + QF +    L    YQRS D
Sbjct: 151 DLLWDVYEDLQKGIDNRGEIITFWDPSRFDEGCLRPCMMMHQFQLIGDTLHLTSYQRSTD 210

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-- 227
           + LG P N+        ++A + G + G+  H + ++H+Y N FE  +  L+R P T+  
Sbjct: 211 ILLGGPANMLQAWFFLELMARITGHKIGKVTHVMNNIHIYENQFESCEEFLNRVPHTMNN 270

Query: 228 PQMIINPNIVDLLSFRYED-------FTLRSYEPHAAILAKVS 263
           P ++ +   VDL  +  +D        TL  Y  +  +    +
Sbjct: 271 PSLVFDDKCVDL-CYVLDDSNGVYDIVTLDGYHHNGKLDIPFA 312


>gi|148550248|ref|YP_001270350.1| thymidylate synthase [Pseudomonas putida F1]
 gi|148514306|gb|ABQ81166.1| thymidylate synthase [Pseudomonas putida F1]
          Length = 234

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 120/236 (50%), Gaps = 53/236 (22%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R VI  G+ + +RTG+ T S  G  +RFDL KGFP +TT+K+ +KS + E++
Sbjct: 1   MKQYLDLVRDVIDNGTLQGNRTGIRTISLPGAMLRFDLQKGFPAITTRKLAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWPDYD--- 105
            FLRG  N       G  +WD+ A++              +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVKNAGEFRELGCKVWDQNANENAQWLANPFRQGHDDLGEIYGVQWRQWPGYKRIP 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQ+   + ++  DP SRR +   WN
Sbjct: 121 LSNPAAIEMAEQAGFRRIAQDEEDGVAFVILYKAIDQVRQCLDTIANDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFY--VDNGKLSCQLYQRSGDVFLGIPFNI---ASYSLLT 185
            A +D+MALPPCH L+QF+  V+  ++S  LY RS D+  G+  ++   A Y+LL 
Sbjct: 181 CAQLDEMALPPCHLLYQFHPNVETREISLTLYIRSNDL--GLLLDMGKSAQYALLA 234


>gi|213025197|ref|ZP_03339644.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 151

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 73/120 (60%), Positives = 97/120 (80%)

Query: 34  MRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           MRF+L +GFPL+TTK+ H +S++HELLWFL+GD+N++YLH + V+IWDEWAD++G+LGP+
Sbjct: 1   MRFNLLEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 60

Query: 94  YGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFY 153
           YG QWR+WP  DG  IDQI++++  L+ DP SRR IVSAWNV  +DKMAL PCH    F 
Sbjct: 61  YGKQWRAWPTPDGRHIDQIATVLSQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFSSFM 120


>gi|167837402|ref|ZP_02464285.1| thymidylate synthase [Burkholderia thailandensis MSMB43]
          Length = 193

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 13/172 (7%)

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF--YVDNGKLSCQL 163
              IDQ+   + ++  DP SRR +   WN A++D++ALP CH L+QF   V+  ++S  L
Sbjct: 22  HKAIDQLRDCLDTIVRDPSSRRILFHGWNPAVLDEIALPACHLLYQFLPNVERREISLCL 81

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           Y RS DV LG PFN+A  + L  ++  + G+    F + +GD H+Y N  +    QL R 
Sbjct: 82  YIRSNDVGLGTPFNLAEGAALLTLVGRLTGYTPRWFTYFIGDAHIYENQLDMLKQQLERE 141

Query: 224 PRTLPQMIINPNIVD-----------LLSFRYEDFTLRSYEPHAAILAKVSV 264
           P   P++ I   + D           L      DF L  Y  H  + A ++V
Sbjct: 142 PFESPRLEIAERVPDYAKTGEYEPQWLERIEPSDFALVGYRHHEPLTAPMAV 193


>gi|330899102|gb|EGH30521.1| thymidylate synthase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 234

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 78/218 (35%), Positives = 113/218 (51%), Gaps = 48/218 (22%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDV 170
            A +D+MALPPCH L+Q + +    ++S  LY RS D+
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDL 218


>gi|218673225|ref|ZP_03522894.1| thymidylate synthase [Rhizobium etli GR56]
          Length = 107

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/107 (61%), Positives = 84/107 (78%)

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           KLSCQLYQRS D+FLG+PFNIASY+LLTMM+A V G + G+F+HTLGD HLY+NHF+QA 
Sbjct: 1   KLSCQLYQRSADIFLGVPFNIASYALLTMMVAEVTGLKPGDFVHTLGDAHLYHNHFDQAK 60

Query: 218 LQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           LQL+R P+ LP M INP + D+  F ++DF L  YE  A+I A ++V
Sbjct: 61  LQLTRRPKPLPFMRINPEVKDIFGFTFDDFELIGYEADASIKAPIAV 107


>gi|15193286|gb|AAK91762.1|AF406763_2 thymidylate synthase [Streptococcus thermophilus]
          Length = 268

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 23/260 (8%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
           +  +++ G           D T   ++   G    +DLSKG FP+ T + +  KS + E+
Sbjct: 12  ITKIMEEGVWSEQARPKYKDGTTANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEV 71

Query: 60  LWFLRGDSNVSYLHR--HGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI---DQISS 114
               +  +N   +    + V  W++W  +     P      RS     G V+   D I+ 
Sbjct: 72  XXXXQDQTNSLDVLEDKYNVHYWNDWEVEGV---PANNGDKRSIGQRYGAVVKKHDIINR 128

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDK-MALPPCHCLFQFYVD----NGKLSCQLYQRSGD 169
           ++  L A+P++RR+++S W+   +++   L PC     F V     +  L   L QRS D
Sbjct: 129 LLAQLEANPWNRRNVISLWDYEALEETAGLQPCAFQTMFDVRRVGEDVYLDATLTQRSND 188

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL-P 228
           + +    N   Y  L MM+A   G++ G+F + + ++H+Y+N FEQA+  L R P    P
Sbjct: 189 MLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLKRQPSDCQP 248

Query: 229 QMIIN-PNIVDLLSFRYEDF 247
           ++++N P+  +    + ED 
Sbjct: 249 RLVLNVPDETNFFDIKPEDI 268


>gi|330967053|gb|EGH67313.1| thymidylate synthase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 234

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 79/218 (36%), Positives = 113/218 (51%), Gaps = 48/218 (22%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG +N +     G  +WD+ A+++             ELG IYGVQWR WP Y    
Sbjct: 61  GFLRGVNNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDELGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   V ++  DP SRR +   WN
Sbjct: 121 VGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCVDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVD--NGKLSCQLYQRSGDV 170
            A +D+MALPPCH L+Q + +    ++S  LY RS D+
Sbjct: 181 CAQLDEMALPPCHLLYQLHPNPQTREISLTLYIRSNDL 218


>gi|89512123|gb|ABD73958.1| dihydrofolate reductase [Plasmodium atheruri]
 gi|89512137|gb|ABD73965.1| dihydrofolate reductase [Plasmodium vinckei]
 gi|89512147|gb|ABD73970.1| dihydrofolate reductase [Plasmodium vinckei petteri]
 gi|89512149|gb|ABD73971.1| dihydrofolate reductase [Plasmodium vinckei petteri]
          Length = 172

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+LS+ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         DY    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             +DKMALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDLDKMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|89512139|gb|ABD73966.1| dihydrofolate reductase [Plasmodium vinckei vinckei]
          Length = 172

 Score =  165 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+LS+ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         DY    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMYADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|89512129|gb|ABD73961.1| dihydrofolate reductase [Plasmodium chabaudi adami]
 gi|89512131|gb|ABD73962.1| dihydrofolate reductase [Plasmodium chabaudi adami]
 gi|89512133|gb|ABD73963.1| dihydrofolate reductase [Plasmodium chabaudi chabaudi]
 gi|89512135|gb|ABD73964.1| dihydrofolate reductase [Plasmodium chabaudi chabaudi]
 gi|89512141|gb|ABD73967.1| dihydrofolate reductase [Plasmodium vinckei brucechwatti]
 gi|89512145|gb|ABD73969.1| dihydrofolate reductase [Plasmodium vinckei lentum]
          Length = 172

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+LS+ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         DY    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|89512143|gb|ABD73968.1| dihydrofolate reductase [Plasmodium vinckei lentum]
          Length = 172

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+LS+ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLSEYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         DY    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMHADYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             ID+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDIDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|169618784|ref|XP_001802805.1| hypothetical protein SNOG_12584 [Phaeosphaeria nodorum SN15]
 gi|160703681|gb|EAT79882.2| hypothetical protein SNOG_12584 [Phaeosphaeria nodorum SN15]
          Length = 256

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 81/215 (37%), Positives = 113/215 (52%), Gaps = 40/215 (18%)

Query: 2   HQYLDL-LRHVIKFGSDRRDRTGVGTRST-FGYQMRFDLSK-----------GFPLLTTK 48
           +QYL+  +RH  +  S       +GT +  F  Q++F LS+             PLLTTK
Sbjct: 42  YQYLNHDIRHPSQMASTAPTAPALGTYALPFPPQLKFTLSRPSTDPSSPPDLILPLLTTK 101

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGV 96
           +V  ++V+ ELLWF+ G ++   L   G+ IWD                ++GELGP+YG 
Sbjct: 102 RVFTRAVIAELLWFIAGSTHSQPLSDAGIKIWDGNGSRAYLDSVGLNHYEEGELGPVYGF 161

Query: 97  QWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           QWR +         DY G  +DQ++ ++  ++  PY RR I+SAWN A + KMALPPCH 
Sbjct: 162 QWRHFGAEYKGHAHDYTGEGVDQLADVIDKIKNKPYDRRIILSAWNPADLKKMALPPCHM 221

Query: 149 LFQFYV-------DNGKLSCQLYQRSGDVFLGIPF 176
             QFYV         G L   LYQRS D+ LG+PF
Sbjct: 222 FAQFYVSFPNGKERRGVLHSLLYQRSCDMGLGVPF 256


>gi|295099624|emb|CBK88713.1| Thymidylate synthase [Eubacterium cylindroides T2-87]
          Length = 231

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 14/214 (6%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L  +++  G    +RTG+ T        + ++ + FP+LTTK++  +  V E+LW  
Sbjct: 8   YCQLCENILTNGVQVANRTGIDTIKLPSAHFQLNVGEEFPILTTKQLFIRQAVLEMLWIY 67

Query: 64  RGDSN-VSYLHRHGVSIWDEWA-DKDGELGPIYGVQWRSWPDYDG------------NVI 109
           +  SN V +L    V IWD W  D++G+       +     D                  
Sbjct: 68  QAQSNDVRWLQERNVHIWDLWQIDENGDWRDEKTGEVLKHFDPKFANTIGTAYGYIVKRF 127

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
             +  ++ SL+ +   RR ++S W    +D   LP C    ++ V NG L+  ++QRS D
Sbjct: 128 KLMDRLIDSLKNNVNDRRRVISLWQDEYLDTAVLPSCVWSSEWDVTNGTLNAWVHQRSCD 187

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           V LG+PFN+  Y++L  MLA V G + G    ++
Sbjct: 188 VPLGLPFNVTQYAVLLKMLAQVTGLKAGTIDWSI 221


>gi|89512125|gb|ABD73959.1| dihydrofolate reductase [Plasmodium berghei]
 gi|89512127|gb|ABD73960.1| dihydrofolate reductase [Plasmodium berghei]
          Length = 172

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 79/172 (45%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+L++ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLNEYFPLLTTKKLFIRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         +Y    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMHDNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             +D+MALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|89512151|gb|ABD73972.1| dihydrofolate reductase [Plasmodium yoelii]
 gi|89512153|gb|ABD73973.1| dihydrofolate reductase [Plasmodium yoelii killicki]
 gi|89512155|gb|ABD73974.1| dihydrofolate reductase [Plasmodium yoelii nigeriensis]
 gi|89512157|gb|ABD73975.1| dihydrofolate reductase [Plasmodium yoelii yoelii]
 gi|89512159|gb|ABD73976.1| dihydrofolate reductase [Plasmodium yoelii yoelii]
          Length = 172

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 80/172 (46%), Positives = 110/172 (63%), Gaps = 20/172 (11%)

Query: 36  FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-------- 87
           F+L++ FPLLTTKK+  + ++ ELLWF+RG++N + L    V IW+    ++        
Sbjct: 1   FNLNQYFPLLTTKKLFVRGIIEELLWFIRGETNGNTLLEKNVRIWEANGTREFLDNRKLF 60

Query: 88  ----GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV 135
                +LGPIYG QWR +         +Y    +DQ+ +I+  ++ DP  RR I+ AWNV
Sbjct: 61  HREVNDLGPIYGFQWRHFGAEYTDMHDNYKDKGVDQLKNIINLIKNDPTCRRIILCAWNV 120

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
             +DKMALPPCH L QFYV +GKLSC +YQRS D+ LG+PFNIASYS+ T M
Sbjct: 121 KDLDKMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTYM 172


>gi|207341205|gb|EDZ69321.1| YOR074Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 164

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 67/154 (43%), Positives = 87/154 (56%), Gaps = 22/154 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDLSKG-FPLLTTKKVHWKSVVHEL 59
            QYLDL + +I  G  R DRTG GT S F   Q+RF L    FPLLTTKKV  + ++ EL
Sbjct: 11  EQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIILEL 70

Query: 60  LWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP----- 102
           LWFL GD++ + L   GV IWD    ++            G+LGP+YG QWR +      
Sbjct: 71  LWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKYKT 130

Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAW 133
              DY G  IDQ+  ++  L+ +PY RR I+SAW
Sbjct: 131 CDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAW 164


>gi|254490265|ref|ZP_05103454.1| thymidylate synthase [Methylophaga thiooxidans DMS010]
 gi|224464398|gb|EEF80658.1| thymidylate synthase [Methylophaga thiooxydans DMS010]
          Length = 194

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 14/190 (7%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHE 58
           M QYLDL + +I+ G      RTG    +     + +D++   FPL+TT+K +WK+ + E
Sbjct: 1   MRQYLDLCQRIIEHGEWVENTRTGKRCLTVINADLEYDVAANQFPLITTRKSYWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           +L +LRG  N +     G   WD  A+ +             ++G +YGVQ R W   DG
Sbjct: 61  MLGYLRGYDNAADFRAIGCKTWDANANANQDWLNNPHRKGEDDMGRVYGVQGRRWQKPDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             +DQ+  I   L      R  I++ +N    D   L PC     F V    L    YQR
Sbjct: 121 TPLDQLQKIADHLAQGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSVLGDTLYLTSYQR 180

Query: 167 SGDVFLGIPF 176
           S DV LG+ F
Sbjct: 181 SCDVPLGLNF 190


>gi|325661465|ref|ZP_08150091.1| hypothetical protein HMPREF0490_00825 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472414|gb|EGC75626.1| hypothetical protein HMPREF0490_00825 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 295

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 44/289 (15%)

Query: 8   LRHVIKFGSDRR-------DRTGVGTRSTFGYQMR-FDLSKG-FPLLTTKKVHWKSVVHE 58
           + +++K G           D +   T S     MR +DLSKG FP+ T + + WKS + E
Sbjct: 13  VENILKCGYKDENPRPKYKDGSPAYTISV-NQNMRMYDLSKGEFPINTLRPIPWKSAIKE 71

Query: 59  LLWFLR-GDSNVSYLH-RHGVSIWDEWADKD--GELGPIYGVQWRSWPDYDGNVIDQISS 114
           + W  +   +N+  L+ ++ +  W++W  KD    +G  YG   + +        D + +
Sbjct: 72  IFWIYQEASNNLEILNNKYNIKYWNDWQSKDVPNTIGQRYGATVKRY--------DLVKN 123

Query: 115 IVQSLRADPYSRRHIVSAWNVALIDKM-ALPPCHCLFQFYVDNG-----KLSCQLYQRSG 168
           +++S+  DP+ R  I++ W    + +   L PC  L  + V         L   L QRSG
Sbjct: 124 LIKSINEDPFGRHKIMNLWQEKDLQETDGLLPCAFLTMWSVRKNLEGKNFLDMTLIQRSG 183

Query: 169 DV---FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR--- 222
           D+     G   N   Y+ L MM+A       G F+H + +  +Y+ H +QA     R   
Sbjct: 184 DMLAASGGGGVNEVQYAALLMMIARHCDLLPGVFVHFVQNEQIYDRHIDQAGEMRRRYIN 243

Query: 223 ---------SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEP-HAAILAK 261
                        +P +++     D  S   +DF +  YEP    I  +
Sbjct: 244 MTMDEFYHEYEHKVPMLVLKDEAKDFYSMTIDDFEMIDYEPIKPQIKFE 292


>gi|310722251|ref|YP_003969075.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4]
 gi|306021094|gb|ADM79629.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4]
          Length = 173

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 67/155 (43%), Positives = 96/155 (61%), Gaps = 17/155 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QY DL+  +I  G  + DRTGVGTRS FG  +RFDLSKGFP  T K++ +  VV ELL
Sbjct: 1   MIQYTDLVCDIITNGRKKTDRTGVGTRSVFGRMLRFDLSKGFPATTCKRLAFVPVVGELL 60

Query: 61  WFLRGDSNVSYLHRHG-------VSIWDEWADK--------DGELGPIYGVQWRSWPDYD 105
           WF++G +NV +L +          +IWD+  +K        DG LGP+YG QWR + + +
Sbjct: 61  WFMQGSTNVEHLRKLTYGENSDRKTIWDDNYNKQAVDLGYSDGYLGPVYGKQWRMFGNKN 120

Query: 106 GNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
              +DQ+ +++  ++A+P SRR +V AWN   I+K
Sbjct: 121 --PVDQLQNVIDQIKANPDSRRLLVVAWNPEDIEK 153


>gi|327197801|ref|YP_004301499.1| gp165 [Brochothrix phage A9]
 gi|299810401|gb|ADJ53200.1| gp165 [Brochothrix phage A9]
          Length = 304

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/295 (24%), Positives = 117/295 (39%), Gaps = 40/295 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDR----TGVGTRSTFGYQMRFDL-SKGFPLLTTKKVHWKSVVH 57
           QYLD L  +   G D   R     G   R      M   L ++    L+ K V  K  + 
Sbjct: 6   QYLDGLFRIFDEGHDEPARGHYQDGTQARHLIIPSMEITLKAEETGRLSLKHVGAKDPIK 65

Query: 58  ELLWFLRG-DSNVSYLHRHGVSIWDE--WADKDGELGPIYGVQWRSWPDYDGNV------ 108
           E+LW  +   S+V+ L   G  +W+   W   +  + P YG Q        G        
Sbjct: 66  EMLWIYQKASSDVTELQEMGCKVWNNTAWHSSENNIAPAYGHQIAKITRVKGKTEQILAY 125

Query: 109 ----------------------IDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
                                 ++Q+  ++  L  DP+S+R     WNV+ +D M LPPC
Sbjct: 126 QQAMYGVPIHDSLLPKAINTFKMNQMHRVIWDLVNDPHSKRIATELWNVSDLDDMVLPPC 185

Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206
               ++ V  GKL  ++ QRS D  +G+P+NI  + +L  M++   G   G+++H + +V
Sbjct: 186 VHRTEWSVIGGKLHLKVLQRSADYCVGVPYNIYQFDVLRRMVSVATGIPLGDYVHNMSNV 245

Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
           H+Y+ H   A         ++P+       V +    +    L       A  A 
Sbjct: 246 HIYDRHIPDAFEMAKTDVDSIPE----TKPVSINKKGFARMKLDDMYHDPAYEAP 296


>gi|189490502|ref|YP_001957072.1| putative thymidylate synthase [Pseudomonas phage 201phi2-1]
 gi|164609567|gb|ABY63176.1| hypothetical protein 201phi2-1p350 [Pseudomonas phage 201phi2-1]
          Length = 457

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 89/271 (32%), Positives = 115/271 (42%), Gaps = 80/271 (29%)

Query: 74  RHGVSIWDEWADKD------GELGPIYGVQWRS-----------WPDYDGNVIDQISSIV 116
            +   I+    DK+      G+LG +YG  WR            W DY+    D +  + 
Sbjct: 187 EYDQRIYRLLFDKEPMKLIGGDLGAVYGKTWRDIEDTRVIPKYDWVDYEARGFDFVVDVP 246

Query: 117 QS----------------------LRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV 154
            +                      LR +P SRR IV AW   L+D+ ALPPCH  FQF+ 
Sbjct: 247 GTSIENDRCVVTRRIDQIQDIIDQLRTNPDSRRIIVCAWAPQLVDEQALPPCHSFFQFWT 306

Query: 155 D---------------------------------------NGKLSCQLYQRSGDVFLGIP 175
                                                      +SC LYQRS D FLG P
Sbjct: 307 RELTVEERIKLLRTTKPEIYNVIDGTTGYFEHIADINDIPKRAISCHLYQRSVDAFLGKP 366

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
           FNI  YSLLT  LA+ +     EF+ T GD H+Y+NH EQ DLQL+R P+ LP +   P 
Sbjct: 367 FNITFYSLLTHWLANQLNMVADEFVWTGGDCHIYSNHQEQTDLQLTREPKALPTIRFTPE 426

Query: 236 I--VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
               D+   R EDF + +YE H  I  KV+V
Sbjct: 427 AKGKDIREIRPEDFEILNYEFHPHIAGKVAV 457



 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 1/88 (1%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHEL 59
          M QYLD +  + + G  + DRTG GT+S  G Q R+ L     P++TTKK+H  S++HEL
Sbjct: 1  MQQYLDSIIDIKENGVFKGDRTGTGTQSKLGQQERYSLRDNTLPVITTKKIHLPSIIHEL 60

Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKD 87
          +W L GD+ V YL  +GV IW+EW    
Sbjct: 61 IWMLSGDTRVDYLIENGVRIWNEWVKPH 88


>gi|78499355|gb|ABB45712.1| thymidylate synthetase [Ovis aries]
          Length = 147

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 20/147 (13%)

Query: 37  DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD--------- 87
           +L   FPLLTTK+V WK V+ ELLWF++G +N   L   GV IWD    +D         
Sbjct: 1   NLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSN 60

Query: 88  ---GELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA 136
              G+LGP+YG QWR +         DY G  +DQ+  ++ +++ +P  RR I+ AWN  
Sbjct: 61  RAEGDLGPVYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPK 120

Query: 137 LIDKMALPPCHCLFQFYVDNGKLSCQL 163
            +  MALPPCH L QFYV NG+ SCQL
Sbjct: 121 DLPLMALPPCHALCQFYVVNGEPSCQL 147


>gi|21700307|gb|AAM75813.1|AF450270_1 bifunctional dihydrofolate reductase-thymidylate synthase
           [Cercomonas longicauda]
          Length = 314

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/167 (40%), Positives = 91/167 (54%), Gaps = 22/167 (13%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           +Y+DL+R +   G  R DRTGVG +  FG  M+F L  G  PLLT +K+ WK VV ELLW
Sbjct: 148 EYIDLIRRIRDQGEIRTDRTGVGIKCVFGNMMKFSLENGQIPLLTIRKIFWKGVVEELLW 207

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRS--------W 101
            LRG ++   L   GV+IW     ++            G+LGPIYG QWR          
Sbjct: 208 MLRGKTHSRDLEEKGVNIWRANGSREALDRLGMVDREVGDLGPIYGWQWRHSGAXYTTAH 267

Query: 102 PDYDGNVIDQISSIVQSLRADPY-SRRHIVSAWNVALIDKMALPPCH 147
            DY G  +DQI  ++  L+  P  +RR +  +WN   + +MALPPCH
Sbjct: 268 TDYSGFGVDQIKDVISQLQNQPQKNRRILFCSWNPKDLKQMALPPCH 314


>gi|90580569|ref|ZP_01236374.1| thymidylate synthase [Vibrio angustum S14]
 gi|90438227|gb|EAS63413.1| thymidylate synthase [Photobacterium angustum S14]
          Length = 187

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/185 (31%), Positives = 85/185 (45%), Gaps = 14/185 (7%)

Query: 1   MHQYLDLLRHVIKFGSD-RRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYL L + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ + E
Sbjct: 1   MKQYLALCQRIVDDGVWIENERTGKRCLTVINADLTYDVANNQFPLITTRKSFWKAAIAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYDG 106
           LL +LRG  N +     G + W+  A+ +             ++G +YGVQ R W   DG
Sbjct: 61  LLGYLRGYDNAAQFRAIGCNTWNANANDNQAWLNNPHRKGEDDMGRVYGVQGRRWQKSDG 120

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             IDQ+  IV  L      R  I++ +N    D   L PC     F +    L    YQR
Sbjct: 121 TPIDQLKKIVDDLTKGIDDRGEILTFYNPGEFDMGCLRPCMHTHTFSLLGDTLYLTSYQR 180

Query: 167 SGDVF 171
           S DV 
Sbjct: 181 SCDVP 185


>gi|71665293|ref|XP_819618.1| dihydrofolate reductase-thymidylate synthase [Trypanosoma cruzi
           strain CL Brener]
 gi|70884927|gb|EAN97767.1| dihydrofolate reductase-thymidylate synthase, putative [Trypanosoma
           cruzi]
          Length = 118

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/118 (46%), Positives = 74/118 (62%)

Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDV 206
             L QFYV NG+LSC LYQRS D+ LG+PFNIASY+LLT+++A   G + GE +HTLGD 
Sbjct: 1   TWLAQFYVSNGELSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDA 60

Query: 207 HLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           H+Y+NH E  + QL R PR  P ++       L  +   D  +  Y P+  I  K++V
Sbjct: 61  HVYSNHVEPCNEQLKRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 118


>gi|112383428|gb|ABI17851.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
 gi|118500801|gb|ABK97597.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
          Length = 195

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 64/147 (43%), Positives = 86/147 (58%), Gaps = 21/147 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 49  RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 109 WFLRGETNARLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRR 127
             +YDG  +DQI  IV++++A+P  RR
Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195


>gi|112383430|gb|ABI17852.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
          Length = 195

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/147 (43%), Positives = 86/147 (58%), Gaps = 21/147 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT S FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 49  RQYLELIDRIMKTGIVKEDRTGVGTISLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 109 WFLRGETNAXLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRR 127
             +YDG  +DQI  IV++++A+P  RR
Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195


>gi|331017947|gb|EGH98003.1| thymidylate synthase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 216

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/204 (34%), Positives = 99/204 (48%), Gaps = 46/204 (22%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYL+L+ HVIK G+ + +RTGV T S  G  +R+DL +GFP +TT+++ +KS + E++
Sbjct: 1   MKQYLELVAHVIKHGTLQANRTGVNTISFPGAMLRYDLQEGFPAITTRRMAFKSAIGEMV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD--- 105
            FLRG SN +     G  +WD+ A+++             +LG IYGVQWR WP Y    
Sbjct: 61  GFLRGVSNAAEFRELGCKVWDQNANENAQWLNNPFRKGEDDLGEIYGVQWRKWPAYKRID 120

Query: 106 -------------------------------GNVIDQISSIVQSLRADPYSRRHIVSAWN 134
                                             IDQI   + ++  DP SRR +   WN
Sbjct: 121 AGNVAAIELALGQGYRQIAESEEDGQSFVVLYKAIDQIRQCIDTIINDPGSRRILFHGWN 180

Query: 135 VALIDKMALPPCHCLFQFYVDNGK 158
            A +D+MALP CH          K
Sbjct: 181 CAQLDEMALPACHFADSATPTVKK 204


>gi|112383432|gb|ABI17853.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
 gi|112383434|gb|ABI17854.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
 gi|112383436|gb|ABI17855.1| dihydrofolate reductase-thymidylate synthase [Leishmania tropica]
          Length = 195

 Score =  151 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 21/147 (14%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
            QYL+L+  ++K G  + DRTGVGT   FG QMRF L     PLLTTK+V W+ V  ELL
Sbjct: 49  RQYLELIDRIMKTGIVKEDRTGVGTIGLFGAQMRFSLRGNRLPLLTTKRVFWRGVCEELL 108

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP------ 102
           WFLRG++N   L    + IWD               +K+ +LGP+YG QWR +       
Sbjct: 109 WFLRGETNAQLLADKDIHIWDGNGSREFLDSRGLTENKEMDLGPVYGFQWRHFGADYKGF 168

Query: 103 --DYDGNVIDQISSIVQSLRADPYSRR 127
             +YDG  +DQI  IV++++A+P  RR
Sbjct: 169 EANYDGEGVDQIRFIVETIKANPNDRR 195


>gi|115524187|ref|YP_781098.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
 gi|115518134|gb|ABJ06118.1| thymidylate synthase [Rhodopseudomonas palustris BisA53]
          Length = 99

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
            G PFNIASY+LLTMM+A V G + G+F+HTLGD HLY+NH EQA LQL+R+PR LP M 
Sbjct: 7   TGKPFNIASYALLTMMVAQVTGLKPGDFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMT 66

Query: 232 INPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           INP + D+  F+YEDF L+ Y+PH  I A+V+V
Sbjct: 67  INPEVKDIFGFKYEDFALQGYDPHPHIKAEVAV 99


>gi|45686030|ref|YP_003793.1| thymidylate synthase [Ambystoma tigrinum virus]
 gi|37722454|gb|AAP33199.1| thymidylate synthase [Ambystoma tigrinum stebbensi virus]
          Length = 95

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 47/95 (49%), Positives = 62/95 (65%)

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           +  G+PFNIASY LLT M+A V G + GEF+HTLGD H+Y +H E    QL R PR  P 
Sbjct: 1   MGFGVPFNIASYFLLTYMMAYVTGLEPGEFVHTLGDAHVYLDHVEPLKTQLEREPRPFPT 60

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + IN  +  L  F+ EDF+L  Y+PH AI  +++V
Sbjct: 61  LRINRRVESLDDFKAEDFSLEGYDPHPAIRMRMAV 95


>gi|332975814|gb|EGK12693.1| thymidylate synthase [Psychrobacter sp. 1501(2011)]
          Length = 102

 Score =  148 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 50/95 (52%), Positives = 65/95 (68%)

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           +FLG+PFNIASYSLLT M+A V   + GEFI T GD HLY NH EQ + QLSR    LP 
Sbjct: 8   IFLGVPFNIASYSLLTHMIAQVCDLEVGEFIWTGGDCHLYQNHIEQVNEQLSREAYELPT 67

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + +NP+I D+  F ++D  + +Y+ H AI A V+V
Sbjct: 68  LWLNPDIKDIFDFTFDDIRVENYKSHPAIKAPVAV 102


>gi|225734443|gb|ACO25211.1| thymidylate synthase [Epizootic haematopoietic necrosis virus]
          Length = 95

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 47/95 (49%), Positives = 63/95 (66%)

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + LG+PFNIASYSLLT M+A V G + GEF+H LGD H+Y ++ E    QL R PR  P 
Sbjct: 1   MGLGVPFNIASYSLLTYMMAHVTGLEPGEFVHNLGDAHVYLDNVEPLKTQLEREPRPFPT 60

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           + IN  +  L  F+ EDF+L  Y+PH AI  +++V
Sbjct: 61  LRINRRVESLDDFKAEDFSLEGYDPHPAIRMRMAV 95


>gi|238602652|ref|XP_002395739.1| hypothetical protein MPER_04156 [Moniliophthora perniciosa FA553]
 gi|215466985|gb|EEB96669.1| hypothetical protein MPER_04156 [Moniliophthora perniciosa FA553]
          Length = 110

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 1/110 (0%)

Query: 156 NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
             KLSC +YQRS D+ LGIPFNIASY+LL  M+A V G +  E I  LGD H+Y +H + 
Sbjct: 1   KPKLSCLMYQRSADLGLGIPFNIASYALLVHMMAQVTGTEPHELIIQLGDAHVYRDHVDA 60

Query: 216 ADLQLSRSPRTLPQMIINPN-IVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              QL R PR  P++      I D+  F Y DF +  Y+P+ +I  K+SV
Sbjct: 61  LKTQLEREPRPFPKLKWAREGINDIEDFVYSDFVVEGYDPYPSIPMKMSV 110


>gi|167945963|ref|ZP_02533037.1| thymidylate synthase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 93

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/93 (66%), Positives = 78/93 (83%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M QYLDL+RHV   G  + DRTG GTRS FGYQMRFDL++GFP LTTKK+H +S++HELL
Sbjct: 1  MKQYLDLMRHVRDQGVTKGDRTGTGTRSVFGYQMRFDLAEGFPALTTKKLHLRSIIHELL 60

Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
          WFL+GD+N+ YL  +GV IWDEWAD++G+LGP+
Sbjct: 61 WFLQGDTNIRYLKENGVRIWDEWADENGDLGPV 93


>gi|213418917|ref|ZP_03351983.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
          Typhi str. E01-6750]
          Length = 93

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 55/93 (59%), Positives = 79/93 (84%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M QYL+L++ V+  G+ + DRTG GT S FG+QMRF+L +GFPL+TTK+ H +S++HELL
Sbjct: 1  MKQYLELIQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLLEGFPLVTTKRCHLRSIIHELL 60

Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
          WFL+GD+N++YLH + V+IWDEWAD++G+LGP+
Sbjct: 61 WFLQGDTNIAYLHENNVTIWDEWADENGDLGPV 93


>gi|213026353|ref|ZP_03340800.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 91

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/91 (47%), Positives = 59/91 (64%)

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIIN 233
           +PFNIASY+LL  M+A       G+F+ T GD HLY+NH EQ  LQLSR PR LP+++I 
Sbjct: 1   MPFNIASYALLVHMMAQQCDLDVGDFVWTGGDTHLYSNHMEQTHLQLSREPRALPKLVIK 60

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                L  +R++DF +  Y+PH  I A V++
Sbjct: 61  RKPDSLFDYRFDDFEIEGYDPHPGIKAPVAI 91


>gi|238025095|ref|YP_002909327.1| Thymidylate synthase protein [Burkholderia glumae BGR1]
 gi|237879760|gb|ACR32092.1| Thymidylate synthase protein [Burkholderia glumae BGR1]
          Length = 329

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R  D    F    ++K +      E LW+
Sbjct: 12  YLATLRDVCTAYEYRNAPRGQAEREIIGYSARIEDPRARFCRHASRKQNVVFNYAEALWY 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G ++++++  +  S+     D     G  YG +   + D     IDQI   +  L+ D
Sbjct: 72  LSGRNDLAFIEYYAPSMARYSPDGKTLPGTGYGARLLHFGDD---GIDQIERAIDILKRD 128

Query: 123 -PYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
              S+R ++  ++       +     C    Q  + +G+L+   + R+ D ++G+  ++ 
Sbjct: 129 DAESKRVVLQIFDAREDLYKRNIDVSCTLGLQLLLRDGRLNMVAFMRANDAYVGLLNDVF 188

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   LAS IG + G + H +G VH+Y+ +  QA+  L
Sbjct: 189 SFTFLQEYLASAIGCELGTYTHHVGSVHIYDQNLLQAEALL 229


>gi|310823030|ref|YP_003955388.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|309396102|gb|ADO73561.1| Thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 336

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 6/220 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  LR + +    R    G  +R   G+     D          +K +      E LW+
Sbjct: 14  YLHGLRWIYESPQFRVAPRGFASRENLGFCFELTDPLARVSCAPERKTNIIFNFAEALWY 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++  +  +  SI     D     G  YG +   +    G  I+Q +  V  L+ D
Sbjct: 74  LSGQADLEQISYYAPSIRKYSMDGRTLTGTAYGAKLFRFG---GAAINQWNRAVDLLKED 130

Query: 123 PYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P ++R ++  ++   +         C    QF+V  G+L    Y R+ D F G+  +I S
Sbjct: 131 PNTKRAVLQIFDAHELLIQDNIDVSCTLGLQFFVREGRLYAAAYMRANDAFRGVVSDIFS 190

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           ++ L  M+A  +G + G + H +G  H+Y       +  L
Sbjct: 191 FTFLQEMMARQLGLKVGSYFHYVGSFHIYEPDIAAVERLL 230


>gi|115377305|ref|ZP_01464513.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|115365683|gb|EAU64710.1| thymidylate synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 333

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 6/220 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  LR + +    R    G  +R   G+     D          +K +      E LW+
Sbjct: 11  YLHGLRWIYESPQFRVAPRGFASRENLGFCFELTDPLARVSCAPERKTNIIFNFAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++  +  +  SI     D     G  YG +   +    G  I+Q +  V  L+ D
Sbjct: 71  LSGQADLEQISYYAPSIRKYSMDGRTLTGTAYGAKLFRFG---GAAINQWNRAVDLLKED 127

Query: 123 PYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P ++R ++  ++   +         C    QF+V  G+L    Y R+ D F G+  +I S
Sbjct: 128 PNTKRAVLQIFDAHELLIQDNIDVSCTLGLQFFVREGRLYAAAYMRANDAFRGVVSDIFS 187

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           ++ L  M+A  +G + G + H +G  H+Y       +  L
Sbjct: 188 FTFLQEMMARQLGLKVGSYFHYVGSFHIYEPDIAAVERLL 227


>gi|167996982|gb|ACA14348.1| MilA [Streptomyces rimofaciens]
          Length = 334

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 12/236 (5%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  LR +      R    G  +R   G   R  D  +    +  ++ +      E LW+
Sbjct: 13  YLSQLRDIYHSPEFRNAPRGQASRERIGAGFRLLDPVQRHISVPARRANVVFNFAEALWY 72

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G   + ++  +   I    AD     G  YG +    P      ++Q  ++V++L  D
Sbjct: 73  LSGSDRLDFIQYYAPGIAAYSADGRTLRGTAYGPRIFRHP---AGGVNQWENVVKTLTDD 129

Query: 123 PYSRRHIVSAWNVALID--KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P S+R ++  ++   +         C    QF + +G L    Y R+ D F G   ++ S
Sbjct: 130 PDSKRAVIQIFDPRELAVADNIDVACTLALQFLIRDGLLCGIGYMRANDAFRGAVSDVFS 189

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS-----PRT-LPQM 230
           ++ L    A  +G   G + H +G VH+Y++    A+  L  +     PR   P M
Sbjct: 190 FTFLQEFTARYLGLGIGTYHHVVGSVHIYDSDARWAERVLDAATPDGGPRPGFPAM 245


>gi|229138942|ref|ZP_04267521.1| Thymidylate synthase [Bacillus cereus BDRD-ST26]
 gi|228644567|gb|EEL00820.1| Thymidylate synthase [Bacillus cereus BDRD-ST26]
          Length = 181

 Score =  141 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 63/170 (37%), Positives = 91/170 (53%), Gaps = 50/170 (29%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++YL+L RHV++ G+ + DRTG GT S FGYQMRFDLSKGFPLLTTK+V ++ V  ELLW
Sbjct: 6   NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLW 65

Query: 62  FLRGDSNVSYLHRHGVSIWDEW-------------------------------------- 83
           F++GD+N+ YL +H  +IW+EW                                      
Sbjct: 66  FMKGDTNIRYLLQHNNNIWNEWAFKSWVESDEYTGPDMTDFGLRSQQDEEFKVQYDEQME 125

Query: 84  ------------ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
                       ++K G LG +YG QWR+W    G  +DQ+  +++ ++ 
Sbjct: 126 LFKKNVLEDDDFSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKK 175


>gi|194450574|ref|YP_002048341.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|300925828|ref|ZP_07141676.1| thymidylate synthase [Escherichia coli MS 182-1]
 gi|194408878|gb|ACF69097.1| thymidylate synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|300418080|gb|EFK01391.1| thymidylate synthase [Escherichia coli MS 182-1]
          Length = 326

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 18/249 (7%)

Query: 6   DLLRH----VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           DL+      ++  G    D T   T    G  +     +     T  +    S + E LW
Sbjct: 12  DLINDVHQAILADGLS-NDPTKGSTLEILGAYLVLTDPRRRISRTESRGKLISCLGEFLW 70

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           +L   +++ ++ +H +  + E A+ DG++   YG +  +       + +Q+ +++  L+ 
Sbjct: 71  YLSAQNDLEFI-KHFIPRYAESAESDGKIHGGYGPRLFNMR----GLYNQLKNVINLLQE 125

Query: 122 DPYSRRHIVSAWNVALIDKMA-------LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
              +RR ++  ++ + +             PC    QF V   +L   +  RS D F+G+
Sbjct: 126 KKPTRRAVIQLFDASDLVPSKTEQREYVDIPCTISMQFIVRCEELHLFVCMRSNDAFMGL 185

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPRTLPQMIIN 233
           P ++ ++++L  ++A +IG + G + H +  +HLY N  E+   LQ      TLP M   
Sbjct: 186 PHDVFAFTMLQELVARLIGCELGHYHHFVSSLHLYKNDLEKVKALQKEGFMSTLPVMGSM 245

Query: 234 PNIVDLLSF 242
           P +  L   
Sbjct: 246 PEMHSLDDI 254


>gi|312965796|ref|ZP_07780022.1| thymidylate synthase family protein [Escherichia coli 2362-75]
 gi|331669729|ref|ZP_08370575.1| conserved hypothetical protein [Escherichia coli TA271]
 gi|312289039|gb|EFR16933.1| thymidylate synthase family protein [Escherichia coli 2362-75]
 gi|331063397|gb|EGI35310.1| conserved hypothetical protein [Escherichia coli TA271]
          Length = 326

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 18/249 (7%)

Query: 6   DLLRH----VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           DL+      ++  G    D T   T    G  +     +     T  +    S + E LW
Sbjct: 12  DLINDVHQAILADGLS-NDPTKGSTLEILGAYLVLTDPRRRISRTESRGKLISCLGEFLW 70

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           +L   +++ ++ +H +  + E A+ DG++   YG +  +       + +Q+ +++  L+ 
Sbjct: 71  YLSAQNDLEFI-KHFIPRYAESAESDGKIHGGYGPRLFNMR----GLYNQLKNVINLLQE 125

Query: 122 DPYSRRHIVSAWNVALIDKMA-------LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
              +RR ++  ++ + +             PC    QF V   +L   +  RS D F+G+
Sbjct: 126 KKPTRRAVIQLFDASDLVPSKTEQREYVDIPCTISMQFIVRCEELHLFVCMRSNDAFMGL 185

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPRTLPQMIIN 233
           P ++ ++++L  ++A +IG + G + H +  +HLY N  E+   LQ      TLP M   
Sbjct: 186 PHDVFAFTMLQELVARLIGCELGHYHHFVSSLHLYKNDLEKVKALQKEGFMSTLPVMGSM 245

Query: 234 PNIVDLLSF 242
           P +  L   
Sbjct: 246 PEMHSLDDI 254


>gi|82592529|sp|P0C0M4|TYSY_STAEP RecName: Full=Thymidylate synthase; Short=TS; Short=TSase
 gi|886709|emb|CAA88268.1| thymidylate synthase [Staphylococcus epidermidis]
          Length = 97

 Score =  138 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 1/98 (1%)

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
           S D+FLG+PFNIASY+LLT ++A   G + GEFIHT GD H+Y+NH +    QLSR    
Sbjct: 1   SADIFLGVPFNIASYALLTHLVAKECGLEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYL 60

Query: 227 LPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            PQ+ IN +   +    YED  L +YE H AI A ++V
Sbjct: 61  PPQLKINTD-KSIFDINYEDLELINYESHPAIKAPIAV 97


>gi|56755327|gb|AAW25843.1| unknown [Schistosoma japonicum]
          Length = 111

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 4/101 (3%)

Query: 167 SGDVFL----GIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           S D+      GIPFNIASY+LLT M+A V G + GEF+HT+GD H+Y+NH E    Q+ R
Sbjct: 10  SFDLCFRQGLGIPFNIASYALLTYMIAHVTGLKPGEFVHTIGDAHIYSNHREALLEQVKR 69

Query: 223 SPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVS 263
           +PR  P++ I   + ++  F++EDF L  Y+P+  +  K++
Sbjct: 70  TPRPFPKLEIVREVENIDDFKFEDFKLIDYKPYPKLSMKMA 110


>gi|218185748|gb|EEC68175.1| hypothetical protein OsI_36122 [Oryza sativa Indica Group]
          Length = 404

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 12/113 (10%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           + YL+L+  +I+ G+ + DRTG GT S FG QMRF+L   FPLLTTKKV W+ VV ELLW
Sbjct: 239 YHYLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLW 298

Query: 62  FLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP 102
           F+ G ++   L   G+ IWD                ++G+LGP+YG QWR + 
Sbjct: 299 FISGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFG 351


>gi|322511193|gb|ADX06506.1| putative thymidylate synthase and pyrimidine hydroxymethylase
           [Organic Lake phycodnavirus 2]
          Length = 171

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 70/159 (44%), Positives = 87/159 (54%), Gaps = 14/159 (8%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYL +++ +   G     R G  T S  G  M F L     P+LTTKKV  K+ + EL 
Sbjct: 15  KQYLAIVKEICLSGHKIEGRNGF-TYSKHGACMSFSLENNTLPILTTKKVALKTCLKELF 73

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSW--------PDYDGNVIDQI 112
           WFL G +N   L+R  V IWD  A+   +LGPIYG QWR +         DY    IDQI
Sbjct: 74  WFLSGSTNNDVLNRQNVHIWDPHAETSNDLGPIYGHQWRHFNAPYVDCESDYTNQGIDQI 133

Query: 113 SSIVQSLRADP---YSRRHIVSAWNVALIDKMALPPCHC 148
             I+ SL  DP   YSRR +VS+WN   +DKM+LPPCH 
Sbjct: 134 QYIIDSL-NDPEKRYSRRLVVSSWNPCQLDKMSLPPCHI 171


>gi|307325213|ref|ZP_07604416.1| thymidylate synthase [Streptomyces violaceusniger Tu 4113]
 gi|306889017|gb|EFN20000.1| thymidylate synthase [Streptomyces violaceusniger Tu 4113]
          Length = 316

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 11/212 (5%)

Query: 13  KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLL--TTKKVHWKSVVHELLWFLRGDSNVS 70
           K G     R G+ TR      +     +   L    T+ V+    V E +W L G  + S
Sbjct: 21  KSGEKVSPR-GMATREVRDVHLLLAQPRARLLYAPPTRIVNPAFAVAETVWHLSGS-DAS 78

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
           ++  +   +       DG L   YG + R+W       +DQ++ +V+ L+ DP SRR ++
Sbjct: 79  WIFDYNERL--RQYADDGVLLGAYGPRMRNW----AGKVDQLARVVEILKEDPDSRRALI 132

Query: 131 SAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             ++ A         PC   F+F++   +L      R  DV++G+P+++  Y++L  ++A
Sbjct: 133 QLYDPAQDAAGHKDVPCTLGFRFHLRADRLHMATMMRGQDVWIGMPYDVFFYTVLHELVA 192

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
             +  + GEF   +G +H+Y+ H EQA+L  S
Sbjct: 193 GWLDAELGEFHLHVGSLHIYDEHVEQAELLTS 224


>gi|157368568|ref|YP_001476557.1| thymidylate synthase [Serratia proteamaculans 568]
 gi|157320332|gb|ABV39429.1| thymidylate synthase [Serratia proteamaculans 568]
          Length = 325

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 18/250 (7%)

Query: 6   DLLRH----VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           DLL      ++  G       G       G  +     +     T  +    S + ELLW
Sbjct: 12  DLLNDVHQAILTDGLWNTPTKGAN-IEILGAYLILTDPRRRISRTESRGKIISCLGELLW 70

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           +L   +++ ++  H +  + ++A+ DG +   YG +  S       + +Q+ +++  L+ 
Sbjct: 71  YLSAQNDLDFIR-HFIPRYVKYAESDGRIHGGYGPRLFSMH----GLYNQLENVISLLQE 125

Query: 122 DPYSRRHIVSAWNVALI-------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGI 174
              +RR ++  ++ + +        + A  PC    QF V    L   +  RS D F+G+
Sbjct: 126 KRTTRRALIQLFDASDLVTDNPEQTEYADIPCTISLQFIVRQDALHLFVCMRSNDAFMGL 185

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD-LQLSRSPRTLPQMIIN 233
           P ++ ++++L  ++A + G + G + H +  +H+Y  HFEQ   LQ      TLP M   
Sbjct: 186 PHDVFAFTMLQELVARLTGCKLGHYHHFVSSLHIYEEHFEQVKALQQEGFMSTLPVMGDM 245

Query: 234 PNIVDLLSFR 243
           P I  L    
Sbjct: 246 PEIQSLKDIT 255


>gi|182678521|ref|YP_001832667.1| thymidylate synthase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634404|gb|ACB95178.1| thymidylate synthase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 342

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 16/215 (7%)

Query: 11  VIKFGSDRRDRTGVG----TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           + + G     RT  G    T    G  +R    +     +  +    S + ELLW+L G 
Sbjct: 19  IKEHG-----RTNAGSRGNTVELLGVALRILKPRARISRSENRGKPFSAIGELLWYLSGL 73

Query: 67  SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126
             ++++  +  +  D+     G +   YG + R+  D     IDQ +SI   LR  P SR
Sbjct: 74  DTLAFIEPYVSAYRDDAVA--GVIQGAYGPRLRAMRD----GIDQFASIETLLRQKPNSR 127

Query: 127 RHIVSAWNVALID-KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLT 185
           R ++  +N   I  +    PC    QF++ +G L   +  RS D + G+P ++  ++++ 
Sbjct: 128 RAVIQLFNAEDIATEHKEIPCTTTLQFHLRDGLLHMSVTMRSNDAYWGLPHDVFCFTMIQ 187

Query: 186 MMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            M+A  +G + GE+ H +G +H+Y  H    D  L
Sbjct: 188 EMMARRLGVELGEYYHYVGSMHVYEKHLNHLDNYL 222


>gi|91785563|ref|YP_560769.1| thymidylate synthase [Burkholderia xenovorans LB400]
 gi|91689517|gb|ABE32717.1| thymidylate synthase [Burkholderia xenovorans LB400]
          Length = 354

 Score =  135 bits (339), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 15/225 (6%)

Query: 6   DLLRHVI-----KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           DLLR V      K GSD  + T        G  +     +     + KK    S + E L
Sbjct: 10  DLLRKVYGRLLRKRGSDDINPTKGPATEINGALLVLKKPRARLSQSEKKNTLFSCLGEFL 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W+L G   + ++  +     D   D     G       R +    G   DQ+ +++Q+LR
Sbjct: 70  WYLAGSDKLDFIQYYISRYKDFSDDGKTVFG---AYGPRLFGPTSGT--DQVQNVIQTLR 124

Query: 121 ADPYSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP 175
           A+ +SRR ++  ++   +      +    PC C  QF++ N +L+  +  RS D F+G+P
Sbjct: 125 ANQHSRRAVIQLFHGDDLAANLVKRREDLPCTCTLQFFIRNYQLNAMVTMRSNDAFMGLP 184

Query: 176 FNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            +I ++++L  ++A  +G + G++ H +G +HLY N+ +  +  L
Sbjct: 185 HDIFAFTMLQELIARSLGVEVGQYKHAVGSLHLYANNTQAVNDYL 229


>gi|53722134|ref|YP_111119.1| thymidylate synthase protein [Burkholderia pseudomallei K96243]
 gi|76819171|ref|YP_335223.1| putative thymidylate synthase protein [Burkholderia pseudomallei
           1710b]
 gi|126444953|ref|YP_001062559.1| putative thymidylate synthase [Burkholderia pseudomallei 668]
 gi|134283524|ref|ZP_01770224.1| putative thymidylate synthase [Burkholderia pseudomallei 305]
 gi|167723549|ref|ZP_02406785.1| putative thymidylate synthase [Burkholderia pseudomallei DM98]
 gi|167819685|ref|ZP_02451365.1| putative thymidylate synthase [Burkholderia pseudomallei 91]
 gi|167828063|ref|ZP_02459534.1| putative thymidylate synthase [Burkholderia pseudomallei 9]
 gi|167898126|ref|ZP_02485528.1| putative thymidylate synthase [Burkholderia pseudomallei 7894]
 gi|167914845|ref|ZP_02501936.1| putative thymidylate synthase [Burkholderia pseudomallei 112]
 gi|167922687|ref|ZP_02509778.1| putative thymidylate synthase [Burkholderia pseudomallei BCC215]
 gi|217418809|ref|ZP_03450316.1| putative thymidylate synthase [Burkholderia pseudomallei 576]
 gi|226198340|ref|ZP_03793910.1| putative thymidylate synthase [Burkholderia pseudomallei Pakistan
           9]
 gi|254263271|ref|ZP_04954136.1| putative thymidylate synthase [Burkholderia pseudomallei 1710a]
 gi|254300441|ref|ZP_04967887.1| putative thymidylate synthase [Burkholderia pseudomallei 406e]
 gi|52212548|emb|CAH38574.1| putative thymidylate synthase protein [Burkholderia pseudomallei
           K96243]
 gi|76583644|gb|ABA53118.1| putative thymidylate synthase protein [Burkholderia pseudomallei
           1710b]
 gi|126224444|gb|ABN87949.1| putative thymidylate synthase [Burkholderia pseudomallei 668]
 gi|134245273|gb|EBA45367.1| putative thymidylate synthase [Burkholderia pseudomallei 305]
 gi|157810077|gb|EDO87247.1| putative thymidylate synthase [Burkholderia pseudomallei 406e]
 gi|217398113|gb|EEC38128.1| putative thymidylate synthase [Burkholderia pseudomallei 576]
 gi|225929624|gb|EEH25641.1| putative thymidylate synthase [Burkholderia pseudomallei Pakistan
           9]
 gi|254214273|gb|EET03658.1| putative thymidylate synthase [Burkholderia pseudomallei 1710a]
          Length = 329

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   +       +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  +  +  L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   LAS +G + G + H +G +H+Y+++  +    L
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228


>gi|167906492|ref|ZP_02493697.1| putative thymidylate synthase [Burkholderia pseudomallei NCTC
           13177]
          Length = 329

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   +       +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  +  +  L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   LAS +G + G + H +G +H+Y+++  +    L
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228


>gi|183980062|ref|YP_001848353.1| thymidylate synthase, ThyA_1 [Mycobacterium marinum M]
 gi|183173388|gb|ACC38498.1| thymidylate synthase, ThyA_1 [Mycobacterium marinum M]
          Length = 316

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 14/222 (6%)

Query: 6   DLLRH----VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           DLLR     + + G      T   TR   G  +     +     T  +   ++ + +L W
Sbjct: 12  DLLREAYTAIREQGQPVL-PTRAPTRELIGVSLELTEPRCRLSRTEARRLSRTGIAQLAW 70

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           +L G +N   +  H V       + DG +   YG   R +   D     Q  ++++ L+ 
Sbjct: 71  YLSGTTNPEMIL-HWVPNHRNELEADGTIHGAYG--PRMFGTGDNA---QFCTVLELLKT 124

Query: 122 DPYSRRHIVSAWNVALID---KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
              SRR ++  ++   +    +    PC    QF+V + +L   +  RS D ++G+P ++
Sbjct: 125 SSSSRRAVIQLFDATDLTGPGRYKDVPCTNTLQFFVRDSRLHLMVTMRSNDAYIGLPLDV 184

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            ++++L  ++A  +G   G +IH++G +H+Y  + E     L
Sbjct: 185 FAFTMLQELMAGELGIGIGRYIHSVGSLHIYEYNKEAIIDFL 226


>gi|237509869|ref|ZP_04522584.1| thymidylate synthase [Burkholderia pseudomallei MSHR346]
 gi|235002074|gb|EEP51498.1| thymidylate synthase [Burkholderia pseudomallei MSHR346]
          Length = 329

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   +       +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  +  +  L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   LAS +G + G + H +G +H+Y+++  +    L
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228


>gi|167742513|ref|ZP_02415287.1| putative thymidylate synthase [Burkholderia pseudomallei 14]
          Length = 236

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   +       +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  +  +  L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   LAS +G + G + H +G +H+Y+++  +    L
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228


>gi|126456897|ref|YP_001075509.1| putative thymidylate synthase [Burkholderia pseudomallei 1106a]
 gi|167849524|ref|ZP_02475032.1| putative thymidylate synthase [Burkholderia pseudomallei B7210]
 gi|254193553|ref|ZP_04899987.1| putative thymidylate synthase [Burkholderia pseudomallei S13]
 gi|126230665|gb|ABN94078.1| putative thymidylate synthase [Burkholderia pseudomallei 1106a]
 gi|169650306|gb|EDS82999.1| putative thymidylate synthase [Burkholderia pseudomallei S13]
          Length = 329

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGYAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   +       +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  +  +  L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   LAS +G + G + H +G +H+Y+++  +    L
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228


>gi|242311181|ref|ZP_04810198.1| putative thymidylate synthase [Burkholderia pseudomallei 1106b]
 gi|242134420|gb|EES20823.1| putative thymidylate synthase [Burkholderia pseudomallei 1106b]
          Length = 329

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGYAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   +       +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIAHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERGLDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  +  +  L  +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEELYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   LAS +G + G + H +G +H+Y+++  +    L
Sbjct: 188 SFTFLQEYLASRLGCELGTYAHQVGSIHVYDDNLPRVQALL 228


>gi|302556579|ref|ZP_07308921.1| thymidylate synthase [Streptomyces griseoflavus Tu4000]
 gi|302474197|gb|EFL37290.1| thymidylate synthase [Streptomyces griseoflavus Tu4000]
          Length = 316

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 16/226 (7%)

Query: 13  KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLL--TTKKVHWKSVVHELLWFLRGDSNVS 70
           K G     R  + T       +     +   L     + V+    V E +W L G  +  
Sbjct: 21  KSGEKISPRD-MATHEVRDVHLLLTQPRARLLYAPPARIVNPAFAVAETVWHLSGS-DAP 78

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
           ++  +   +       +G L   YG + R+W       +DQ++ +++ L+ADP SRR ++
Sbjct: 79  WIFDYNNRL--RQFADEGVLLGAYGPRMRNW----AGKVDQLARVIEILQADPDSRRALI 132

Query: 131 SAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             ++ A         PC   F+F++  G+L      R  DV++G+P+++  Y++L  ++A
Sbjct: 133 QLYDPAQDAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWIGMPYDVFFYTVLHELVA 192

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPN 235
             +  + GEF   +G +H+Y+ H EQAD+  S     LP   I P+
Sbjct: 193 GWLDAELGEFHLHIGSLHIYDEHIEQADMLTS-----LPASEIMPD 233


>gi|255635545|gb|ACU18123.1| unknown [Glycine max]
          Length = 139

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/111 (47%), Positives = 68/111 (61%), Gaps = 12/111 (10%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YL L++ +I  G+ + DRTG GT S FG QMRF+L   FPLLTTKKV W+ VV ELLWF+
Sbjct: 11  YLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVEELLWFI 70

Query: 64  RGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP 102
            G +N   L   G+ IWD  A             ++G+LGP+YG QWR + 
Sbjct: 71  SGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFG 121


>gi|167565755|ref|ZP_02358671.1| putative thymidylate synthase [Burkholderia oklahomensis EO147]
 gi|167572854|ref|ZP_02365728.1| putative thymidylate synthase [Burkholderia oklahomensis C6786]
          Length = 329

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     +K +      E LW+
Sbjct: 11  YLATLRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   +       +DQI   V  L R 
Sbjct: 71  LSGRNDLEFIEHYAPSMARYSPDGKHLPGTGYGARLLHYG---ERSLDQIERAVDILSRD 127

Query: 122 DPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++       +     C    Q  + +G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEDLYRRNIDVSCTLGLQLLLRDGRLHTVAFMRANDAYIGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   +AS +G + G + H +G +H+Y+++  +    L
Sbjct: 188 SFTFLQEYVASRLGCEVGTYSHHVGSIHVYDDNLPRVQALL 228


>gi|90420526|ref|ZP_01228433.1| possible thymidylate synthase [Aurantimonas manganoxydans SI85-9A1]
 gi|90335254|gb|EAS49007.1| possible thymidylate synthase [Aurantimonas manganoxydans SI85-9A1]
          Length = 338

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 11/221 (4%)

Query: 5   LDLLRHVIKFGSDRRDRTGV----GTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
             L + + K G      T      GT    G  +R    +     +  +    S + ELL
Sbjct: 13  HQLYQDIDKHGRQHGGGTRGNKLGGTVELLGVALRITNPRARISRSENRGKPFSALGELL 72

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W+L G + ++++  +     ++  D  G L   YG ++ +        IDQ  SI + LR
Sbjct: 73  WYLSGSNKLTFIKPYVSEYENDAVD--GVLEGAYGPRFLAMR----GEIDQFDSIERLLR 126

Query: 121 ADPYSRRHIVSAWNVALID-KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
             P SRR +V  +N   I       PC    QF++  G+L   +  RS D + G+P ++ 
Sbjct: 127 RKPGSRRAVVQLFNAEDIATDHKEIPCTTTLQFHLREGRLHLSVTLRSNDAYWGLPHDVF 186

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            ++++  M+A  +  + GE+   +G +H+Y+ +       L
Sbjct: 187 CFTMIQEMMARRLEAELGEYYQYVGSMHVYDKYLPDMRAYL 227


>gi|239994617|ref|ZP_04715141.1| thymidylate synthase [Alteromonas macleodii ATCC 27126]
          Length = 88

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 58/88 (65%), Positives = 73/88 (82%)

Query: 8  LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
          +RHV   G  + DRTG GT S FGYQMRF+L +GFPL+TTKK H KS++HELLWFL+G++
Sbjct: 1  MRHVRDTGVKKEDRTGTGTLSVFGYQMRFNLQEGFPLVTTKKCHLKSIIHELLWFLKGET 60

Query: 68 NVSYLHRHGVSIWDEWADKDGELGPIYG 95
          N++YL  HGVSIWDEWA ++GELGP+YG
Sbjct: 61 NIAYLKEHGVSIWDEWATEEGELGPVYG 88


>gi|21700313|gb|AAM75816.1|AF450273_1 bifunctional dihydrofolate reductase-thymidylate synthase
           [Diplonema ambulator]
          Length = 255

 Score =  131 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 13/114 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
            QYLDL+  +IK G  + DRTGVGT S FG QMRF L  G  PLLTTK+V WK V  EL 
Sbjct: 141 QQYLDLVDDIIKNGFTKGDRTGVGTISKFGAQMRFSLRDGVIPLLTTKRVFWKGVAEELF 200

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP 102
           WF++G +N   L   GV IWD    +            + +LGPIYG+QW  + 
Sbjct: 201 WFIKGCTNGKDLKDKGVHIWDGNGTRAFLDSRGLPDRAEDDLGPIYGLQWSHFG 254


>gi|21700309|gb|AAM75814.1|AF450271_1 bifunctional dihydrofolate reductase-thymidylate synthase
           [Chlamydaster sterni]
          Length = 260

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 13/114 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
            QYLDL+  +I  G+ R DRTG GT S FG QMRF       PLLTTKKV W+ V  E+L
Sbjct: 146 KQYLDLVDRIITSGTQRGDRTGTGTLSIFGTQMRFSPRDDTLPLLTTKKVFWRGVAEEML 205

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP 102
           WF++G ++   L    + IWD+               ++G+LGP+YG QWR + 
Sbjct: 206 WFMKGCTDARVLSAKKIHIWDDNASRKFLDENGLSHREEGDLGPVYGFQWRHFG 259


>gi|167839730|ref|ZP_02466414.1| putative thymidylate synthase [Burkholderia thailandensis MSMB43]
          Length = 329

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 93/221 (42%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLWF 62
           YL  LR V      R    G   R   GY  R D  +  F     ++ +      E LW+
Sbjct: 11  YLSALRDVCGAYEYRSAPRGHAEREIIGYGARIDDPRARFCRHAARRQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   +       +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIEHYAPSMARYSPDGKHLPGTGYGARLMHYG---ERALDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++       +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEDLYRRNIDVSCTLGLQLLLREGRLHLVAFMRANDAYVGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   +AS +G + G + H +G +H+Y+++  +    L
Sbjct: 188 SFTFLQEYVASRLGCEIGTYSHHVGSIHVYDDNLPRVRALL 228


>gi|256784563|ref|ZP_05522994.1| thymidylate synthase [Streptomyces lividans TK24]
 gi|289768447|ref|ZP_06527825.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289698646|gb|EFD66075.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 316

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 11/208 (5%)

Query: 13  KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLL--TTKKVHWKSVVHELLWFLRGDSNVS 70
           K G     R G+ T       +     +         + V+    V E +W L G  +  
Sbjct: 21  KSGEKISPR-GMATHEVRDVHLLLTQPRARLFYAPPARIVNPAFAVAETVWHLSGS-DAP 78

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
           ++  +   +       DG L   YG + R+W    G  +DQ++ +V+ L+AD  SRR ++
Sbjct: 79  WIFDYNNRL--RQFADDGVLLGAYGPRMRNW----GGKVDQLARVVEILQADSDSRRALI 132

Query: 131 SAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             ++ A         PC   F+F++  G+L      R  DV++G+P+++  Y++L  ++A
Sbjct: 133 QLYDPAQDAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWIGMPYDVFFYTVLHELVA 192

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
             +  + GEF   +G +H+Y+ H EQAD
Sbjct: 193 GWLDAELGEFHLHIGSLHIYDEHIEQAD 220


>gi|29135171|ref|NP_803801.1| ORF235 [Pseudomonas phage phiKZ]
 gi|18996700|gb|AAL83136.1|AF399011_235 PHIKZ235 [Pseudomonas phage phiKZ]
          Length = 488

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 17/156 (10%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           Q+ ++++  R    +    V  W    +D+   P              +SCQLYQRS D 
Sbjct: 348 QVKALLRVCRGYEKATDEAVVEW----LDQHGAP-----------KRAISCQLYQRSCDT 392

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
           FLG PFNI  YSLLT MLA+ +     EFI T GDVH+Y+NH EQ DLQL+R P+ LP +
Sbjct: 393 FLGKPFNITFYSLLTHMLANQMNMIAEEFIWTGGDVHIYSNHQEQTDLQLTREPKVLPTI 452

Query: 231 IINPNI--VDLLSFRYEDFTLRSYEPHAAILAKVSV 264
                    D+     +DF + +YE H+ I  KV+V
Sbjct: 453 RFKQEAIGKDIREIGVDDFVIENYEYHSHIAGKVAV 488



 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHEL 59
          M QYL+ +R V + G  + DRTG GT+S FG Q R+ L     P++TTKK+H  SV+HEL
Sbjct: 1  MEQYLNSIRLVKEHGVHKGDRTGTGTQSMFGQQERYSLRNNRLPVVTTKKIHLASVIHEL 60

Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPI 93
           W L GD+ V YL  +GV IW+EW   +  +   
Sbjct: 61 FWMLSGDTKVDYLIANGVRIWNEWVKPETAVYEP 94


>gi|269968966|ref|ZP_06182902.1| Thymidylate synthase [Vibrio alginolyticus 40B]
 gi|269826423|gb|EEZ80821.1| Thymidylate synthase [Vibrio alginolyticus 40B]
          Length = 130

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 5/130 (3%)

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
              L PC     F + +  L     QRS DV LG+ FN+    +   ++A + G + G+ 
Sbjct: 1   MGCLRPCMYSHHFSLLDDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKPGQA 60

Query: 200 IHTLGDVHLYNNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSF----RYEDFTLRSYEP 254
            H + + H+Y +  E   D+QL R P   P   INP I  L         +DF +  YE 
Sbjct: 61  FHKIVNAHIYEDQLELMRDVQLKREPLKAPTFHINPEIKSLEDLETWVTLDDFWVEGYEH 120

Query: 255 HAAILAKVSV 264
           H  I    SV
Sbjct: 121 HDPIRYPFSV 130


>gi|296531913|ref|ZP_06894716.1| thymidylate synthase [Roseomonas cervicalis ATCC 49957]
 gi|296267779|gb|EFH13601.1| thymidylate synthase [Roseomonas cervicalis ATCC 49957]
          Length = 351

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 111/252 (44%), Gaps = 19/252 (7%)

Query: 6   DLLRHVIKFGSDR----RDRT--GVG-TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHE 58
           D L   ++    R    + RT  G G  R   G  ++    +     T  +    S + E
Sbjct: 6   DTLDDALRQAFTRLLSSKTRTSSGKGPAREIIGAILKIRNPRARFSRTENRAVLFSCLGE 65

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQS 118
            LW+L G ++++++  +          K G      G   R +   + + ++    +++ 
Sbjct: 66  TLWYLSGSNSLAHITYYIKKYRKLSGAKKGARLASGGYGPRIFGSGNKSQMNAAIQLIRR 125

Query: 119 LRADPY----SRRHIVSAWN-VALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
             ADP     +R+ ++  ++ + L+   +  PC C  QF    G+L   ++ RS D ++G
Sbjct: 126 KLADPDGKTDTRQAVIQIYDKLDLLRNSSDVPCTCTMQFLPRRGRLHMVVHMRSNDAYIG 185

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL-----SRSPRTLP 228
           +P ++ +++ +  ++A  +G + G + H++G +HLY++   +A   L     SR+   +P
Sbjct: 186 LPHDVFAFTFMQEIVAREVGLELGTYTHSVGSLHLYDHDERRARDFLAEGWQSRT--EMP 243

Query: 229 QMIINPNIVDLL 240
            M I      + 
Sbjct: 244 AMPIGDPWPSID 255


>gi|154685031|ref|YP_001420192.1| hypothetical protein RBAM_005690 [Bacillus amyloliquefaciens FZB42]
 gi|154350882|gb|ABS72961.1| hypothetical protein RBAM_005690 [Bacillus amyloliquefaciens FZB42]
          Length = 336

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 105/253 (41%), Gaps = 13/253 (5%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           Y + L  +           G  +R    Y +   +  +    L+++K +      E+LW+
Sbjct: 10  YTETLYDIYHNPEFFNSPRGQKSREQLNYHLTLENPIERVTYLSSRKTNIVFNFAEVLWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ ++  +   +     +K    G  YG +   + +   N  ++I +++     D
Sbjct: 70  LSGSNDLDFISYYNKKMPSYSMNKKTLTGTAYGPKIFEFGNAKLNQWNRIKNLLTQ--ED 127

Query: 123 PYSRRHIVSAWNVALID--KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             S+R  +  ++ + +   +     C    QF+V  G+L      R+ D F G+  ++ S
Sbjct: 128 IDSKRAFIQIFDASELFVLENIDVSCTIGLQFFVREGELYMSSVMRANDAFRGMISDLFS 187

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS-------PRTLPQMIIN 233
           ++ +  ++A  +  + GE+ H  G +H+Y++  E A   L  +           P+M   
Sbjct: 188 FTFMQELMARELRLEVGEYFHNAGSIHIYDSDHEWAKTVLEEAENHHDIPEFEFPKMPEG 247

Query: 234 PNIVDLLS-FRYE 245
            N   + +  +YE
Sbjct: 248 NNWPSIETVLKYE 260


>gi|145244279|gb|ABP49090.1| putative thymidylate synthase [Streptomyces lividans]
          Length = 308

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 11/208 (5%)

Query: 13  KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLL--TTKKVHWKSVVHELLWFLRGDSNVS 70
           K G     R G+ T       +     +         + V+    V E +W L G  +  
Sbjct: 13  KSGEKISPR-GMATHEVRDVHLLLTQPRARLFYAPPARIVNPAFAVAETVWHLSGS-DAP 70

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
           ++  +   +       DG L   YG + R+W    G  +DQ++ +V+ L+AD  SRR ++
Sbjct: 71  WIFDYNYRL--RQFADDGVLLGAYGPRMRNW----GGKVDQLARVVEILQADSDSRRALI 124

Query: 131 SAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             ++ A         PC   F+F++  G+L      R  DV++G+P+++  Y++L  ++A
Sbjct: 125 QLYDPAQDAAGHKDVPCTLGFRFHLRAGRLHMATMMRGQDVWIGMPYDVFFYTVLHELVA 184

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
             +  + GEF   +G +H+Y+ H EQAD
Sbjct: 185 GWLDAELGEFHLHIGSLHIYDEHIEQAD 212


>gi|21700305|gb|AAM75812.1|AF450269_1 bifunctional dihydrofolate reductase-thymidylate synthase [cf.
           'Cafeteria' marsupialis 'Wood's Hole']
          Length = 268

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 13/113 (11%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-PLLTTKKVHWKSVVHELLW 61
           QYL+ +R ++  G DR DRTG GT S FG  MRF L     PL+TTKKV W+ VV ELLW
Sbjct: 155 QYLNAIRDILDNGVDRSDRTGTGTLSKFGLHMRFSLRDNTLPLITTKKVFWRGVVEELLW 214

Query: 62  FLRGDSNVSYLHRHGVSIWDE------------WADKDGELGPIYGVQWRSWP 102
           F+RG ++   L   GV IWD             + +++G+LGP+YG QW  + 
Sbjct: 215 FVRGFTDSKLLSAKGVHIWDGNGSREYLDSRGLFHNEEGDLGPVYGFQWSHFG 267


>gi|33304365|gb|AAQ02620.1| thymidylate synthase [Hartmannella cantabrigiensis]
          Length = 136

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 13/114 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+++  +I+ G  + DRTGVGT S FG QMRF L  G FPLLTTK+V WK VV ELL
Sbjct: 11  YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP 102
           WF+RGD+N + L + GV IWD                ++ +LGP+YG QWR + 
Sbjct: 71  WFIRGDTNGANLSKKGVKIWDANGSRQFLDSRGLTQREENDLGPVYGFQWRHFG 124


>gi|170694064|ref|ZP_02885220.1| thymidylate synthase [Burkholderia graminis C4D1M]
 gi|170141136|gb|EDT09308.1| thymidylate synthase [Burkholderia graminis C4D1M]
          Length = 353

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 95/204 (46%), Gaps = 11/204 (5%)

Query: 22  TGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81
            G  T   +G  +     +     + +K    S + E LW+L G + + ++  + +  + 
Sbjct: 32  KGTNT-EIYGALLLLKNPRARLSQSERKNTVFSCLGEFLWYLSGSNKLDFIQ-YYIKSYS 89

Query: 82  EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
           E++D +  +   YG +            +Q+ +++++LRA   SRR  +  ++   + + 
Sbjct: 90  EFSDDNETIFGAYGPRLFG----SDKAPNQVQNVIETLRASSTSRRAAIQLYHGEDLAQN 145

Query: 142 -----ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQY 196
                   PC C  QF V + +L   +  RS D F+G+P +I ++++L  ++A  +G + 
Sbjct: 146 LEKRRKDLPCTCTLQFTVRDHQLHAMVMMRSNDAFMGLPHDIFAFTMLQELIARSLGVEV 205

Query: 197 GEFIHTLGDVHLYNNHFEQADLQL 220
           G++ H +G +HLY    +     L
Sbjct: 206 GQYKHAVGSLHLYATDIQSVLDYL 229


>gi|296111884|ref|YP_003622266.1| putative thymidylate synthase protein [Leuconostoc kimchii IMSNU
           11154]
 gi|295833416|gb|ADG41297.1| putative thymidylate synthase protein [Leuconostoc kimchii IMSNU
           11154]
          Length = 332

 Score =  128 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 95/242 (39%), Gaps = 9/242 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTK-KVHWKSVVHELLWF 62
           Y+ +L  +           G  +R    Y  R +      +   K K +      E+LW+
Sbjct: 11  YMSVLNDIYNHADFFNQPRGFQSREKIAYHFRINQPVQRGIYNQKRKCNIIFNFAEVLWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G++ + Y+  +   + D   D     G  YG +     +  G    Q  ++   L  D
Sbjct: 71  LTGNNRLDYISYYNKKMPDYSMDGRILTGTAYGSKLF---NDKGQQSSQWQNVKDLLIKD 127

Query: 123 PYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P S+R ++  ++ + +         C    QF++ +  L    Y R+ D F GI  ++ S
Sbjct: 128 PDSKRAVLQIFDGSELAIPNNLDVSCTLGLQFFIRDNHLDMIAYMRANDAFRGIVSDVFS 187

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS---RSPRTLPQMIINPNIV 237
           ++ +  ++A  +    G++ H++G +H+Y          L     +    P+M +  N  
Sbjct: 188 FTFIQELMARELHIPVGKYYHSVGTMHIYEPDNLWVTHVLETPNEAQFKFPEMPLENNWD 247

Query: 238 DL 239
            +
Sbjct: 248 MI 249


>gi|255023190|ref|ZP_05295176.1| thymidylate synthase [Listeria monocytogenes FSL J1-208]
          Length = 87

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 52/86 (60%), Positives = 69/86 (80%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1  MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK 86
          WFL GD+N+ YL +H  +IW+EWA +
Sbjct: 61 WFLHGDTNIRYLLQHNNNIWNEWAFE 86


>gi|209972965|ref|YP_002300412.1| gp29 [Bacillus phage SPO1]
 gi|209871285|gb|ACI91041.1| gp29 [Bacillus phage SPO1]
          Length = 383

 Score =  128 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 12/220 (5%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           Y+D+L  VIK G     R G   +      + F +  +    L  + ++    V E LW 
Sbjct: 13  YMDILSTVIKEGDVLAPR-GKRIKEIRPVMIEFKNPIRRTTFLKGRNINPFFQVAESLWI 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI-----DQISSIVQ 117
           L G S+V +L  +  ++  +++D        YG + R W   D N       DQ+  + +
Sbjct: 72  LAGRSDVGFLLDYNKNMG-QFSDDGVFFNAPYGERLRFWNRSDANNFIYNPLDQLRDVYE 130

Query: 118 SLRADPYSRRHIVSAWNVALID---KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG- 173
            ++ADP +R+ +   +N    +        PC+ L  F + NGKL   +Y RS D+  G 
Sbjct: 131 KIKADPDTRQAVAVIYNPLFDNINNDTKDRPCNLLLSFKLRNGKLDLSVYNRSNDLHWGT 190

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
              N+  +S +   +A+ +G + G +      +H+Y + +
Sbjct: 191 FGANLCQFSTILEAMATWLGVEVGSYYQITDSLHVYLDDY 230


>gi|310722252|ref|YP_003969076.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4]
 gi|306021095|gb|ADM79630.1| thymidylate synthetase-like protein [Aeromonas phage phiAS4]
          Length = 105

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 4/106 (3%)

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
              QRS DV LG+PFNIASY+LL  ++A +   + GE + +  DVH+Y NH       LS
Sbjct: 1   MWSQRSVDVGLGLPFNIASYALLVHIVARICNLEVGELVFSGADVHIYENHLSHLGGMLS 60

Query: 222 RSPRTLPQMIINPNIVDLLS---FRYEDFTLRSYEPHAAILAKVSV 264
           R  R LP +   P+I  L         DF L  Y+PH  I   ++V
Sbjct: 61  REERPLPTLSF-PDIDSLSDLRLLEAADFRLDGYDPHPTIKLPMAV 105


>gi|399407|sp|P31654|DUHM_BPSP1 RecName: Full=Deoxyuridylate hydroxymethyltransferase;
           Short=Deoxyuridylate hydroxymethylase; AltName:
           Full=dUMP hydroxymethylase; Short=dUMP-HMase
 gi|14871|emb|CAA43136.1| 29 [Bacillus phage SPO1]
          Length = 383

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 12/220 (5%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           Y+D+L  VIK G     R G   +      + F +  +    L  + ++    V E LW 
Sbjct: 13  YMDILSTVIKEGDVLAPR-GKRIKEIRPVMIEFKNPIRRTTFLKGRNINPFFQVAESLWI 71

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI-----DQISSIVQ 117
           L G S+V +L  +  ++  +++D        YG + R W   D N       DQ+  + +
Sbjct: 72  LAGRSDVGFLLDYNKNMG-QFSDDGVFFNAPYGERLRFWNRSDANNFIYNPLDQLRDVYE 130

Query: 118 SLRADPYSRRHIVSAWNVALID---KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG- 173
            ++ADP +R+ +   +N    +        PC+ L  F + NGKL   +Y RS D+  G 
Sbjct: 131 KIKADPDTRQAVAVIYNPLFDNINNDTKDRPCNLLLSFKLRNGKLDLSVYNRSNDLHWGT 190

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
              N+  +S +   +A+ +G + G +      +H+Y + +
Sbjct: 191 FGANLCQFSTILEAMATWLGVEVGSYYQITDSLHVYLDDY 230


>gi|207727475|ref|YP_002255869.1| putative thymidylate synthase protein [Ralstonia solanacearum
           MolK2]
 gi|206590712|emb|CAQ56324.1| putative thymidylate synthase protein [Ralstonia solanacearum
           MolK2]
          Length = 294

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 90/240 (37%), Gaps = 10/240 (4%)

Query: 12  IKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70
           ++ G     R GV T           D  + +  L  ++      + EL W LRG S V 
Sbjct: 5   LQNGQRTAPR-GVATLELLPVAFTINDPRRRYVSLPPRRWSIVYAIGELCWHLRGSSLVD 63

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
            +  +         +     G  YG +             Q S ++  LR D  SRR ++
Sbjct: 64  EIAYYASRWRTIAGNATEVTGSNYGAKIFKGHR---GAPSQWSRVINQLRIDRDSRRAVL 120

Query: 131 SAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
                            C    QF + +GKL      RS D  LG+P+++  +S+L  M 
Sbjct: 121 YFSGTGEDTSSDSKDIACAVSLQFLIRDGKLDAIANMRSNDAMLGLPYDVFLFSMLQEMA 180

Query: 189 ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS---RSPRTLPQMIINPNIVDLLSFRYE 245
           A+ +G   G++ H  G +HLY +    A   +S      R +P+M     +  LL    E
Sbjct: 181 ANSLGVDVGKYNHVAGSLHLYESDLLLAKDIISSRASEIRPMPRMEGLSALPSLLEGEAE 240


>gi|299142236|ref|ZP_07035369.1| thymidylate synthase [Prevotella oris C735]
 gi|298576325|gb|EFI48198.1| thymidylate synthase [Prevotella oris C735]
          Length = 212

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y ++L+ +I  G  + +R G   R     Q+         +  +  +  K + +EL 
Sbjct: 1   MNKYHEILKRIIVSGKTQHNRKGC-IRYLLNEQLSLSPVDLLDIFESHGIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              V   S+P Y   +   I+ I +  R
Sbjct: 60  LFMQGERQVQKYREVGINWWDY----------CGSVLVNSYPTYFEKLPPLIAKINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D+G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    +A  I          LG+VH+Y N+ E+  L L
Sbjct: 165 LYL----MAQQIDLPLKNITLNLGNVHIYENNLERTRLLL 200


>gi|21700303|gb|AAM75811.1|AF450268_1 bifunctional dihydrofolate reductase-thymidylate synthase
           [Amastigomonas debruynei]
          Length = 259

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/111 (46%), Positives = 69/111 (62%), Gaps = 12/111 (10%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           YLDL+R V+  G +R DRTGVGT S FG ++ FDL  GFPLLTTK+V W+ V  ELLWF+
Sbjct: 148 YLDLIRRVLADGFERDDRTGVGTFSLFGEKLEFDLGDGFPLLTTKRVFWRGVAEELLWFV 207

Query: 64  RGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWP 102
            G +N + L   G+ IWD  + ++            G+LGP+YG QW  + 
Sbjct: 208 SGSTNANELAAKGIRIWDGNSSREYLDSIGLTEREVGDLGPVYGFQWSHFG 258


>gi|329957058|ref|ZP_08297625.1| thymidylate synthase [Bacteroides clarus YIT 12056]
 gi|328523326|gb|EGF50425.1| thymidylate synthase [Bacteroides clarus YIT 12056]
          Length = 239

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + ++ G   +     Q+    +    +     +  K + +EL 
Sbjct: 28  MNKYYCILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRNELQ 86

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ NV      G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 87  LFMQGERNVEKYREVGINWWDY----------CGSILVNSYPTYFEKLPPLIAKINREKR 136

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D+G+L    YQRS D  LG+P +I  
Sbjct: 137 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPSDIYH 191

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    +A  I          LG+VH+Y N+     L +
Sbjct: 192 LYL----MARQIELPLKSITLYLGNVHIYENNIPGTRLLI 227


>gi|317504674|ref|ZP_07962639.1| thymidylate synthase [Prevotella salivae DSM 15606]
 gi|315664201|gb|EFV03903.1| thymidylate synthase [Prevotella salivae DSM 15606]
          Length = 212

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  +++ G  + ++ G   R     Q+    +    +  +  +  K + +EL 
Sbjct: 1   MNKYYQMLDKILEQGKPQANKKG-NIRYLLNEQLSLSPADLLDIFESHGIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              V   S+P Y   +   I+ I +  R
Sbjct: 60  LFMQGERQVEKYREVGINWWDY----------CGSVLVNSYPTYFEKLPPLIAKINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D+G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDDGELVLSAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    +A  I          LG+VH+Y N+  +    L
Sbjct: 165 LYL----MARQIDLPLKNITLNLGNVHIYENNINRTKQLL 200


>gi|116618549|ref|YP_818920.1| thymidylate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097396|gb|ABJ62547.1| thymidylate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 335

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 96/221 (43%), Gaps = 6/221 (2%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLT-TKKVHWKSVVHELLWF 62
           Y+  L  +        +  G  +R   G   + +      + + T+K +      E LW+
Sbjct: 11  YIAELNEIYHHAEFFNEPRGFSSREKLGVHFKIENPVQRIVYSQTRKTNIIFNFAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G++++SY+  +   + D   D     G  YG +   +       ++Q  ++ Q L  D
Sbjct: 71  LTGNNSLSYISYYNKRMPDYSMDGQTLTGTAYGKKLFHFG---EQNLNQWQNVKQELLND 127

Query: 123 PYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             S+R ++  ++   +  ++     C    QF + N +L+   Y R+ D F GI  +I S
Sbjct: 128 ADSKRAVIQIFDAHELTINQNLDVSCTLGLQFLIRNNQLNMVAYMRANDAFRGIVSDIFS 187

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           ++ +   +A  +  + G++ H++G +H+Y    +     L+
Sbjct: 188 FTFIQEFMARELNLKVGKYYHSVGTMHIYEPDNQWVTHVLN 228


>gi|33304359|gb|AAQ02616.1| thymidylate synthase [Hartmannella cantabrigiensis]
          Length = 136

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 13/114 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+++  +I+ G  + DRTGVGT S FG QMRF L  G FPLLTTK+V WK VV ELL
Sbjct: 11  YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP 102
           WF+RGD N + L + GV IWD                ++ +LGP+YG QWR + 
Sbjct: 71  WFIRGDINGANLSKKGVKIWDANGSRQFLDSRGLTQREENDLGPVYGFQWRHFG 124


>gi|83747574|ref|ZP_00944611.1| Deoxyuridylate hydroxymethyltransferase [Ralstonia solanacearum
           UW551]
 gi|83725754|gb|EAP72895.1| Deoxyuridylate hydroxymethyltransferase [Ralstonia solanacearum
           UW551]
          Length = 352

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 98/196 (50%), Gaps = 11/196 (5%)

Query: 26  TRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWAD 85
                G  ++    +     T ++    S + E LW+L G + +S++  + +S +DE++D
Sbjct: 33  CSDLHGVLLQIRNPRARVSRTEQRSTLFSCLGEFLWYLAGSNELSFIQ-YYISRYDEFSD 91

Query: 86  KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALID-----K 140
               +   YG +      ++   ++Q+S++++ L  +  +RR ++  +N   +       
Sbjct: 92  DGNTVHGAYGPRL-----FNMRGVNQVSNVIEKLSGNNDTRRAVIQLFNAEDLGCDVAVG 146

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
               PC C  QF +   +L   +  RS D +LG+P +I ++++L  ++A  +G + G + 
Sbjct: 147 RKDIPCTCTMQFSLRARQLHMFVTMRSNDAYLGLPHDIFAFTMLQEIVARAVGAELGTYK 206

Query: 201 HTLGDVHLYNNHFEQA 216
           H +G +HLY+ + +QA
Sbjct: 207 HAVGSLHLYSKNTDQA 222


>gi|319643105|ref|ZP_07997736.1| hypothetical protein HMPREF9011_03337 [Bacteroides sp. 3_1_40A]
 gi|317385273|gb|EFV66221.1| hypothetical protein HMPREF9011_03337 [Bacteroides sp. 3_1_40A]
          Length = 212

 Score =  125 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  V+  G  + ++ G   R     Q+    +    +     +  K + +EL 
Sbjct: 1   MNKYYQILGKVLSSGKMQSNKKG-NIRYLLNEQLTLLPADLLDIFEGHTIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F+RG+ NV      G++ WD              +   S+P Y   +   I  I +  R
Sbjct: 60  LFMRGERNVEKYREVGINWWDY----------CGSILVNSYPTYFEKLPPLIERINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +I+   +       A  PC  L QF ++ G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYILFLGSTGTESNQA--PCLSLVQFQIEQGELVMTAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
             L    ++  I          LG+VH+Y N+ ++ +  LS
Sbjct: 165 LYL----ISRQIELPLKSITLNLGNVHIYENNIDKTEQLLS 201


>gi|33304368|gb|AAQ02622.1| thymidylate synthase [Hartmannella cantabrigiensis]
          Length = 136

 Score =  125 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 13/114 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+++  +I+ G  + DRTGVGT S FG QMRF L  G FPLLTTK+V WK VV ELL
Sbjct: 11  YQYLEMIDDIIRHGVRKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDEW------------ADKDGELGPIYGVQWRSWP 102
           WF+RGD+N + L + G  IWD                ++ +LGP+YG QWR + 
Sbjct: 71  WFIRGDTNGANLSKKGDKIWDANGSRQFLDSRGLTHREENDLGPVYGFQWRHFG 124


>gi|255010683|ref|ZP_05282809.1| thymidylate synthase [Bacteroides fragilis 3_1_12]
          Length = 212

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  V+  G  + +R G   R     ++    +    +     +  K +  EL 
Sbjct: 1   MNKYYQILGRVLASGKTQTNRKG-NIRYLLNERLTLTPADLLDIFEGHPIARKKLKDELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ NV      G++ WD              +   S+P Y       +  +++ + 
Sbjct: 60  LFMQGERNVEKYREAGINWWDY----------CGSILVNSYPTYLEK----LPPLIERIN 105

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +  S ++ V        +     PC  L QF ++ G+L    YQRS D  LG+P +I  
Sbjct: 106 REKRSSKNYVLFLGSTDAESNQ-APCLSLVQFQIEQGELVMTAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    ++  I          LG+VH+Y N+  + +  L
Sbjct: 165 LYL----MSRQIDLPLKSITLNLGNVHIYENNISRTEQLL 200


>gi|311278400|ref|YP_003940631.1| thymidylate synthase [Enterobacter cloacae SCF1]
 gi|308747595|gb|ADO47347.1| thymidylate synthase [Enterobacter cloacae SCF1]
          Length = 593

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 110/248 (44%), Gaps = 26/248 (10%)

Query: 22  TGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81
            G  T    G  ++ +  +     T  K    S + ELLW++ G  ++ ++  + +  ++
Sbjct: 30  KGKAT-EITGVLIKINNPRARLSRTEGKGKVFSALGELLWYMSGLHDLEFIR-YYIPKYN 87

Query: 82  EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI-DK 140
            ++D +  +    G   R + +      +Q   ++Q LR    SR+ I+  ++   + +K
Sbjct: 88  CFSDDNKTIY--GGYGPRIFGND-----NQFMRVIQLLREKKDSRQAIIQIFHSDDLKEK 140

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
               PC C  QF + N KLS  +  RS DVFLG P ++ +++++    AS++G   G++ 
Sbjct: 141 HKDIPCTCTLQFILRNNKLSLIVNMRSNDVFLGFPHDVFAFTMIQEYAASILGCDLGDYK 200

Query: 201 HTLGDVHLYNNHFEQADLQLSR------SPRTLPQ----------MIINPNIVDLLSFRY 244
           H +G +HLY+ H  +A   ++          ++P+          +     I + +    
Sbjct: 201 HFVGSLHLYDEHRIKAQGYINEGWQEVIEMPSMPKDNVENNLNILLKKENEIRNNIDIDI 260

Query: 245 EDFTLRSY 252
           +   L  Y
Sbjct: 261 DKLELNDY 268


>gi|313148493|ref|ZP_07810686.1| predicted protein [Bacteroides fragilis 3_1_12]
 gi|313137260|gb|EFR54620.1| predicted protein [Bacteroides fragilis 3_1_12]
          Length = 240

 Score =  124 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  V+  G  + +R G   R     ++    +    +     +  K +  EL 
Sbjct: 29  MNKYYQILGRVLASGKTQTNRKG-NIRYLLNERLTLTPADLLDIFEGHPIARKKLKDELQ 87

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ NV      G++ WD              +   S+P Y       +  +++ + 
Sbjct: 88  LFMQGERNVEKYREAGINWWDY----------CGSILVNSYPTYLEK----LPPLIERIN 133

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +  S ++ V        +     PC  L QF ++ G+L    YQRS D  LG+P +I  
Sbjct: 134 REKRSSKNYVLFLGSTDAESNQ-APCLSLVQFQIEQGELVMTAYQRSSDANLGLPADIYH 192

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    ++  I          LG+VH+Y N+  + +  L
Sbjct: 193 LYL----MSRQIDLPLKSITLNLGNVHIYENNISRTEQLL 228


>gi|187777878|ref|ZP_02994351.1| hypothetical protein CLOSPO_01470 [Clostridium sporogenes ATCC
           15579]
 gi|187774806|gb|EDU38608.1| hypothetical protein CLOSPO_01470 [Clostridium sporogenes ATCC
           15579]
          Length = 328

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 11/244 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  L  V           G  ++    Y M   +  +      ++K +      E LW+
Sbjct: 14  YLKNLNDVYYNPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 73

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ Y+  +  ++     D     G  YG +  S+   +   I+Q   I++  + D
Sbjct: 74  LSGSNDLDYISYYASNMKKYSMDGKILTGTAYGPKIFSYGHNN---INQWHRIIELFKED 130

Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P ++R  +  +  N  L  K     C   FQF++   +L    + R+ D + GI  ++ S
Sbjct: 131 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHELYMTTFMRANDAYRGIISDVFS 190

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235
           ++ +   LA+ +    G++ H +   H+Y   F+ A+  LS     +     P+M    +
Sbjct: 191 FTFIQEFLATELNLDVGQYSHNVATTHIYEPDFKLAEKVLSESKSAKKELYFPRMPKKDS 250

Query: 236 IVDL 239
             DL
Sbjct: 251 WQDL 254


>gi|170758959|ref|YP_001786125.1| thymidylate synthase [Clostridium botulinum A3 str. Loch Maree]
 gi|169405948|gb|ACA54359.1| thymidylate synthase [Clostridium botulinum A3 str. Loch Maree]
          Length = 324

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 100/244 (40%), Gaps = 11/244 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           Y+  L  V           G  ++    Y M   +  +      ++K +      E LW+
Sbjct: 10  YIKNLNDVYYNPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ Y+  +  ++     D     G  YG +  S+   +   ++Q   I++  + D
Sbjct: 70  LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYGHNN---VNQWHRIIELFKED 126

Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI  ++ S
Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235
           ++ +   LA+ +    G++ H +   H+Y   F+ A+  L      +   + P+M    N
Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246

Query: 236 IVDL 239
             DL
Sbjct: 247 WEDL 250


>gi|153939390|ref|YP_001390126.1| thymidylate synthase [Clostridium botulinum F str. Langeland]
 gi|152935286|gb|ABS40784.1| thymidylate synthase [Clostridium botulinum F str. Langeland]
 gi|295318216|gb|ADF98593.1| thymidylate synthase [Clostridium botulinum F str. 230613]
          Length = 324

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 11/244 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  L  V           G  ++    Y M   +  +      ++K +      E LW+
Sbjct: 10  YLRNLNDVYYTPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ Y+  +  ++     D     G  YG +  S+   +   I+Q   I++  + D
Sbjct: 70  LSGSNDLDYISYYASNMKKYSMDGKILTGTAYGPKIFSYGHNN---INQWHRIIELFKED 126

Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI  ++ S
Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235
           ++ +   LA+ +    G++ H +   H+Y   F+ A+  L      +   + P+M    N
Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSDKKELSFPRMPKKDN 246

Query: 236 IVDL 239
             DL
Sbjct: 247 WEDL 250


>gi|33304362|gb|AAQ02618.1| thymidylate synthase [Hartmannella cantabrigiensis]
          Length = 136

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 13/114 (11%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELL 60
           +QYL+++  +I+ G  + DRTGVGT S FG QMRF L  G FPLLTTK+V WK VV ELL
Sbjct: 11  YQYLEMIDDIIRHGVSKDDRTGVGTISKFGAQMRFSLRDGVFPLLTTKRVFWKGVVEELL 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWP 102
           WF+RGD+N + L + GV I D                ++ +LGP+YG QWR + 
Sbjct: 71  WFIRGDTNGANLSKKGVKICDANGSRQFLDSRGLTQREENDLGPVYGFQWRHFG 124


>gi|170755095|ref|YP_001780402.1| thymidylate synthase [Clostridium botulinum B1 str. Okra]
 gi|169120307|gb|ACA44143.1| thymidylate synthase [Clostridium botulinum B1 str. Okra]
          Length = 324

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 11/244 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  L  V           G  ++    Y M   +  +      ++K +      E LW+
Sbjct: 10  YLRNLNDVYYTPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ Y+  +  ++     D     G  YG +  S+   + N I+Q + I++  + D
Sbjct: 70  LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSY---EYNKINQWNRIIKLFKED 126

Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI  ++ S
Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIRERKLYMTTFMRANDAYRGIISDVFS 186

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235
           ++ +   LA+ +    G++ H +   H+Y   F+ A+  L      +   + P+M    N
Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246

Query: 236 IVDL 239
             DL
Sbjct: 247 WEDL 250


>gi|226948057|ref|YP_002803148.1| thymidylate synthase [Clostridium botulinum A2 str. Kyoto]
 gi|226843129|gb|ACO85795.1| thymidylate synthase [Clostridium botulinum A2 str. Kyoto]
          Length = 324

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 11/244 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  L  V           G  ++    Y M   +  +      ++K +      E LW+
Sbjct: 10  YLRNLNDVYYTPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ Y+  +  ++     D     G  YG +  S+     N I+Q + I++  + D
Sbjct: 70  LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYG---YNKINQWNRIIKLFKED 126

Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI  ++ S
Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235
           ++ +   LA+ +    G++ H +   H+Y   F+ A+  L      +   + P+M    N
Sbjct: 187 FTFIQEFLAAELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246

Query: 236 IVDL 239
             DL
Sbjct: 247 WEDL 250


>gi|254884020|ref|ZP_05256730.1| predicted protein [Bacteroides sp. 4_3_47FAA]
 gi|294778521|ref|ZP_06743944.1| thymidylate synthase [Bacteroides vulgatus PC510]
 gi|254836813|gb|EET17122.1| predicted protein [Bacteroides sp. 4_3_47FAA]
 gi|294447783|gb|EFG16360.1| thymidylate synthase [Bacteroides vulgatus PC510]
          Length = 214

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + ++ G   +     Q+    +    +     +  K +  EL 
Sbjct: 3   MNKYYRILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHHIARKKLRSELQ 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ NV      G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 62  LFMQGERNVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIAKINRERR 111

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDIYH 166

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    +A  I          LG+VH+Y N+ +     L
Sbjct: 167 LYL----MARQIELPLKSITLYLGNVHIYENNIQGTRALL 202


>gi|53728853|ref|ZP_00134736.2| COG0207: Thymidylate synthase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 146

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 156 NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE- 214
           +G L     QRS +V LG+ +N+        ++A + G + G+  H + + H+Y +  E 
Sbjct: 33  DGTLYLNSTQRSANVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIVNAHIYEDQLEL 92

Query: 215 QADLQLSRSPRTLPQMIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
             D+QL R P   P++ INP I  L         +DF +  YE H AI    SV
Sbjct: 93  MRDVQLKRKPLASPKLWINPAIKSLEDLETWVTLDDFKVEGYEYHPAIQYPFSV 146


>gi|168178163|ref|ZP_02612827.1| thymidylate synthase [Clostridium botulinum NCTC 2916]
 gi|182670584|gb|EDT82558.1| thymidylate synthase [Clostridium botulinum NCTC 2916]
          Length = 324

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 11/244 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  L  V           G  ++    Y M   +  +      ++K +      E LW+
Sbjct: 10  YLKNLNDVYYTPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ Y+  +  ++     D     G  YG +  S+   +    +Q   IV+  + D
Sbjct: 70  LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYGHNNA---NQWHRIVELFKED 126

Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI  ++ S
Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235
           ++ +   LA+ +    G++ H +   H+Y   F+ A+  L      +   + P+M    N
Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246

Query: 236 IVDL 239
             DL
Sbjct: 247 WEDL 250


>gi|254882962|ref|ZP_05255672.1| predicted protein [Bacteroides sp. 4_3_47FAA]
 gi|298383655|ref|ZP_06993216.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|332878991|ref|ZP_08446704.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|254835755|gb|EET16064.1| predicted protein [Bacteroides sp. 4_3_47FAA]
 gi|298263259|gb|EFI06122.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|332683098|gb|EGJ55982.1| thymidylate synthase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 212

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M +Y  +L  V+  G  + ++ G   R     Q+    +    +     +  K + +EL 
Sbjct: 1   MDKYYQILGKVLSSGKMQSNKKG-NIRYLLNEQLTLLPADLLDIFEGHTIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F+RG+ NV      G++ WD              +   S+P Y   +   I  I +  R
Sbjct: 60  LFMRGERNVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIERINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +I+   +       A  PC  L QF ++ G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYILFLGSTGTESNQA--PCLSLVQFQIEQGELVMTAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    ++  I          LG+VH+Y N+ ++ +  L
Sbjct: 165 LYL----ISRQIELPLKSITLNLGNVHIYENNIDKTEQLL 200


>gi|148378764|ref|YP_001253305.1| thymidylate synthase [Clostridium botulinum A str. ATCC 3502]
 gi|153931597|ref|YP_001383152.1| thymidylate synthase [Clostridium botulinum A str. ATCC 19397]
 gi|153935631|ref|YP_001386700.1| thymidylate synthase [Clostridium botulinum A str. Hall]
 gi|148288248|emb|CAL82322.1| putative phage-related deoxyuridylate hydroxymethyltransferase
           [Clostridium botulinum A str. ATCC 3502]
 gi|152927641|gb|ABS33141.1| thymidylate synthase [Clostridium botulinum A str. ATCC 19397]
 gi|152931545|gb|ABS37044.1| thymidylate synthase [Clostridium botulinum A str. Hall]
          Length = 324

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 11/244 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           Y+  L  V           G  ++    Y M   +  +      ++K +      E LW+
Sbjct: 10  YIKNLNDVYYNPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIIFNFAEALWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ Y+  +  ++     D     G  YG +  S+     N I+Q + I++  + D
Sbjct: 70  LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYG---YNKINQWNRIIKLFKED 126

Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI  ++ S
Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235
           ++ +   LA+ +    G++ H +   H+Y   F+ A+  L      +   + P+M    N
Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSAKKELSFPRMPKKDN 246

Query: 236 IVDL 239
             DL
Sbjct: 247 WEDL 250


>gi|255690930|ref|ZP_05414605.1| thymidylate synthase [Bacteroides finegoldii DSM 17565]
 gi|260173138|ref|ZP_05759550.1| thymidylate synthase [Bacteroides sp. D2]
 gi|265750833|ref|ZP_06086896.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|298385881|ref|ZP_06995438.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|315921413|ref|ZP_07917653.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|319640489|ref|ZP_07995210.1| hypothetical protein HMPREF9011_00807 [Bacteroides sp. 3_1_40A]
 gi|260623265|gb|EEX46136.1| thymidylate synthase [Bacteroides finegoldii DSM 17565]
 gi|263237729|gb|EEZ23179.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|298261109|gb|EFI03976.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|313695288|gb|EFS32123.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|317387867|gb|EFV68725.1| hypothetical protein HMPREF9011_00807 [Bacteroides sp. 3_1_40A]
          Length = 214

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + ++ G   +     Q+    +    +     +  K +  EL 
Sbjct: 3   MNKYYRILDKILATGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRSELQ 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ NV      G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 62  LFMQGERNVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIAKINRERR 111

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDIYH 166

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    +A  I          LG+VH+Y N+       +
Sbjct: 167 LYL----MARQIELPLKSITLYLGNVHIYENNIPGTRALI 202


>gi|298386359|ref|ZP_06995915.1| thymidylate synthase [Bacteroides sp. 1_1_14]
 gi|298260736|gb|EFI03604.1| thymidylate synthase [Bacteroides sp. 1_1_14]
          Length = 214

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + ++ G   +     Q+    +    +     +  K +  EL 
Sbjct: 3   MNKYYRILDKILVAGKTQTNKKG-NIQYLLNEQLSLTPADLLDIFEGHNIARKKLRSELQ 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ NV      G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 62  LFMQGERNVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIAKINREKR 111

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 112 N---SKNYVLFLGETGAESNQA--PCLSLVQFQLDGGELVLSAYQRSSDANLGLPSDIYH 166

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    +A  I          LG+VH+Y N+       +
Sbjct: 167 LYL----MARQIELPLKSITLYLGNVHIYENNIPGTRALI 202


>gi|331028071|ref|YP_004421785.1| thymidylate synthase [Roseobacter phage RDJL Phi 1]
 gi|301341534|gb|ADK73418.1| thymidylate synthase [Roseobacter phage RDJL Phi 1]
          Length = 295

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 13/225 (5%)

Query: 4   YLDLLRHVIKFGSDRRD-RTGVGTRSTFG-YQMRFDLSKGF-PLLTTKKVHWKSVVHELL 60
           Y  LL  ++  G    + RT    +   G +  + DL+ G  P+   ++ +      E  
Sbjct: 10  YRCLLGELMNHGVTETNERTRTQIKMLQGGHSFKLDLTSGRLPIAGNRRYYPHVAAAETA 69

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W   G  + +++      +W ++  +DGEL   YG +WR     +    DQI   V+ L 
Sbjct: 70  WQFMGTKDPAFIVSKAPKLWSKFV-EDGELKTAYGHRWR-----EAFGRDQIKLAVKELM 123

Query: 121 ADPYSRRHIVSAWNVALI----DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
            +P +R+  +SAW+ +       +    PC   F        L   ++ RS D F+G+P+
Sbjct: 124 DNPTNRQLFISAWDPSCDGLGGPQPKNIPCPVGFTVSRFRDDLHMSVFIRSSDAFVGLPY 183

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           ++  Y+L    + +  G +      TL   HLY  H+   +  L+
Sbjct: 184 DVMCYALTADAIGAEAGLRPASLHVTLAHPHLYEPHWLATEACLT 228


>gi|317505072|ref|ZP_07963018.1| thymidylate synthase [Prevotella salivae DSM 15606]
 gi|315663783|gb|EFV03504.1| thymidylate synthase [Prevotella salivae DSM 15606]
          Length = 212

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y   L  +++ G  + ++ G   R     Q+    +    +  +  +  K + +EL 
Sbjct: 1   MNKYYQTLGKILERGKIQTNKKG-NIRYLLNEQLSLSPADLLDIFESHGIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              V   S+P Y   +   I  I +  R
Sbjct: 60  LFMQGERLVEKYREAGINWWDY----------CGSVLVNSYPTYFEKLPPLIVRINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLFLGETGAESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    +A  I          LG+VH+Y N+ E+  L L
Sbjct: 165 LYL----MARQIDLPLKNITLNLGNVHIYENNLERTRLLL 200


>gi|21700315|gb|AAM75817.1|AF450274_1 bifunctional dihydrofolate reductase-thymidylate synthase
           [Tetrahymena sp.]
          Length = 311

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 53/113 (46%), Positives = 67/113 (59%), Gaps = 13/113 (11%)

Query: 3   QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHELLW 61
           QYLDL++ V+  G  R DRTG GT S FG  MRFDLS G FPLLTTKK   + +  EL W
Sbjct: 198 QYLDLVQRVVSTGVSRGDRTGTGTLSIFGAMMRFDLSSGAFPLLTTKKTFLRGIAEELFW 257

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADK------------DGELGPIYGVQWRSWP 102
           FL+GD++ + L    V IWD  A +            +G+LGP+YG QW  + 
Sbjct: 258 FLKGDTSQTRLAAKDVHIWDANATRAFLDARGLPDRPEGDLGPVYGCQWSHFG 310


>gi|168183433|ref|ZP_02618097.1| thymidylate synthase [Clostridium botulinum Bf]
 gi|182673502|gb|EDT85463.1| thymidylate synthase [Clostridium botulinum Bf]
          Length = 324

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 11/244 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  L  V           G  ++    Y M   +  +      ++K +      E LW+
Sbjct: 10  YLKNLNDVYYNPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ Y+  +  ++     D     G  YG +  S+     N I+Q   IV+  + D
Sbjct: 70  LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYG---YNKINQWHRIVELFKED 126

Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI  ++ S
Sbjct: 127 QDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIRKHKLYMTTFMRANDAYRGIISDVFS 186

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235
           ++ +   LA+ +    G++ H +   H+Y   F+ A+  L      +   + P+M    N
Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246

Query: 236 IVDL 239
             DL
Sbjct: 247 WEDL 250


>gi|167577956|ref|ZP_02370830.1| deoxyuridylate hydroxymethyltransferase , putative [Burkholderia
           thailandensis TXDOH]
          Length = 329

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFD-LSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  L  V      R    G   R   GY  R D     F     +K +      E LW+
Sbjct: 11  YLATLSDVCGAYEFRSAPRGHAEREIIGYGARIDDPRARFCRRAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   +       +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIEHYAPSMARYSPDGKHLPGTGYGARLMHYG---ARALDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++       +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEDLYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYVGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   +A+ +G + G + H +G +H+Y+++  +A   L
Sbjct: 188 SFTFLQEYVATRLGCEIGAYSHHVGSIHVYDDNLPRALALL 228


>gi|311896637|dbj|BAJ29045.1| putative methyltransferase [Kitasatospora setae KM-6054]
          Length = 322

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 11/205 (5%)

Query: 11  VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLL--TTKKVHWKSVVHELLWFLRGDSN 68
           ++  G     R G+ T    G  ++        +     + ++      E +W L G S 
Sbjct: 20  ILSQGRSVAPR-GMATAELMGAYLKLTNPAARMVHLGPYRVLNPAFAAAETVWILSGSS- 77

Query: 69  VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128
             ++H     +        G L   YG + R W       +DQ+  + + L  D  SRR 
Sbjct: 78  ADWIHDFNSRL--AGLTDHGALQGAYGPRLRRWH----GQLDQLDYVRRQLTRDNESRRA 131

Query: 129 IVSAWNVA-LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
           +V  ++           PC   ++FY+  G+L      RS DV+LG+P+++ + ++L  +
Sbjct: 132 VVQIFDPGRDTAGHKDVPCTLGYRFYLREGRLEMHTSMRSQDVWLGLPYDLITTTVLHEL 191

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNH 212
           +A  +G + G++ H +  +HLY  H
Sbjct: 192 MAGWLGAEVGDYHHHVDSLHLYAQH 216


>gi|237708114|ref|ZP_04538595.1| predicted protein [Bacteroides sp. 9_1_42FAA]
 gi|301309963|ref|ZP_07215902.1| thymidylate synthase [Bacteroides sp. 20_3]
 gi|229457942|gb|EEO63663.1| predicted protein [Bacteroides sp. 9_1_42FAA]
 gi|300831537|gb|EFK62168.1| thymidylate synthase [Bacteroides sp. 20_3]
          Length = 212

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 20/224 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L+ V+  G  ++ R G  +R      +    ++   +     +  K +  EL 
Sbjct: 1   MNKYYQILKKVLADGKTQKGRKGE-SRYLLNETVTLSPAELLDIFEGHNIARKKLRSELS 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F+ G+  V      G++ WD              +   S+P Y   +   I  I +  R
Sbjct: 60  LFMSGERQVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIGKINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +   S+ +++   +       A  PC  L QF ++ G+L    YQRS D  LG+P +I  
Sbjct: 110 S---SKNYVLFLGSTGTESNQA--PCLSLVQFQIEQGELVLTAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSP 224
             L    ++  I          LG+VH+Y N+  +    L+ +P
Sbjct: 165 LYL----ISRQIELPLKSITINLGNVHIYENNVTRTQELLAGNP 204


>gi|254884961|ref|ZP_05257671.1| predicted protein [Bacteroides sp. 4_3_47FAA]
 gi|254837754|gb|EET18063.1| predicted protein [Bacteroides sp. 4_3_47FAA]
          Length = 214

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + +R G   +      +    +    +     +  K + +EL 
Sbjct: 3   MNKYYQVLDKILATGKTQSNRKG-NIQYLLNEVLVLTPADLLDIFEGHHIARKKLRNELH 61

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              +   S+P Y   +   I  I +  R
Sbjct: 62  LFMQGERQVEKYREAGINWWDY----------CGSILVNSYPTYFEKLPPLIDKINREKR 111

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++      +       PC  L QF +DNG+L    YQRS D  LG+P +I  
Sbjct: 112 N---SKNYVLFLGETGVESNQT--PCLSLVQFQIDNGELVLSAYQRSSDANLGLPADIYH 166

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    +A  I          LG+VH+Y N+       L
Sbjct: 167 LYL----MARQIELPLKSITLYLGNVHIYENNIPGTRALL 202


>gi|255019274|ref|ZP_05291400.1| thymidylate synthase [Listeria monocytogenes FSL F2-515]
          Length = 78

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/78 (60%), Positives = 62/78 (79%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M QYLDL ++V++ G+ + DRTG GT STFGYQMRFDL +GFP++TTK+V +K VV ELL
Sbjct: 1  MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELL 60

Query: 61 WFLRGDSNVSYLHRHGVS 78
          WFL GD+N+ YL +H  +
Sbjct: 61 WFLHGDTNIRYLLQHNNN 78


>gi|288927902|ref|ZP_06421749.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330736|gb|EFC69320.1| thymidylate synthase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 215

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  LL +++  G ++ ++ G  T      Q+    +    +  ++ +  + + +EL 
Sbjct: 4   MNKYYSLLDNILSDGHNQTNKKGNITY-LLNQQLTLTPADLLDIFESRSIARRKLRNELD 62

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+ +V+   + G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 63  LFMQGERDVAKYRKAGITWWDY----------CGSILVNSYPTYFEKLPALIARINREKR 112

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
                       +  +   +    PC  L QF +D+G+L    YQRS D  LG+P +I  
Sbjct: 113 TSKN-----YVLFLGSTDAESNQAPCLSLVQFQIDDGQLVISAYQRSSDANLGLPSDIYH 167

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    ++  I          LG+VH+Y N+  +    L
Sbjct: 168 LYL----MSRQIELPLKSITLFLGNVHVYENNIGRTRALL 203


>gi|83718309|ref|YP_439499.1| deoxyuridylate hydroxymethyltransferase [Burkholderia thailandensis
           E264]
 gi|257142625|ref|ZP_05590887.1| deoxyuridylate hydroxymethyltransferase, putative [Burkholderia
           thailandensis E264]
 gi|83652134|gb|ABC36198.1| deoxyuridylate hydroxymethyltransferase , putative [Burkholderia
           thailandensis E264]
          Length = 329

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 7/221 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFD-LSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  L  V      R    G   R   GY  R D     F     +K +      E LW+
Sbjct: 11  YLATLSDVCGAYEFRSAPRGHAEREIIGYGARIDDPRARFCRRAARKQNVVFNYAEALWY 70

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSL-RA 121
           L G +++ ++  +  S+     D     G  YG +   +       +DQI   +  L R 
Sbjct: 71  LSGRNDLEFIEHYAPSMARYSPDGKHLPGTGYGARLMHYG---ARALDQIERALDILSRD 127

Query: 122 DPYSRRHIVSAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D  S+R ++  ++       +     C    Q  +  G+L    + R+ D ++G+  ++ 
Sbjct: 128 DAESKRVVLQIFSADEDLYRRNIDVSCTLGLQLLLREGRLHMVAFMRANDAYVGLLNDVF 187

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           S++ L   +A+ +  + G + H +G +H+Y+++  +A   L
Sbjct: 188 SFTFLQEYVATRLDCEIGAYSHHVGSIHVYDDNLPRALALL 228


>gi|325271010|ref|ZP_08137596.1| thymidylate synthase [Prevotella multiformis DSM 16608]
 gi|324986656|gb|EGC18653.1| thymidylate synthase [Prevotella multiformis DSM 16608]
          Length = 212

 Score =  119 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y D+L  +++ G  + ++ G   +     Q+    +    +  +  +  K + +EL 
Sbjct: 1   MNKYHDILEKIMRTGKMQHNKKG-NIKCLLNEQLSLSPADLLDIFESHDIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              V   S+P Y   +   I+ I +  R
Sbjct: 60  LFMQGERQVEKYREAGINWWDY----------CGSVLVNSYPTYFEQLPPLIAKINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +I+           A  PC  L QF +D G L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYILFLGETNAESNQA--PCLSLVQFQIDEGVLVLSAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    ++  I          L +VH+Y ++ E+    L
Sbjct: 165 LYL----MSRQIDLPLKSITLNLANVHIYESNLERTKELL 200


>gi|237794066|ref|YP_002861618.1| thymidylate synthase [Clostridium botulinum Ba4 str. 657]
 gi|229262626|gb|ACQ53659.1| thymidylate synthase [Clostridium botulinum Ba4 str. 657]
          Length = 324

 Score =  119 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 11/244 (4%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           YL  L  V           G  ++    Y M   +  +      ++K +      E LW+
Sbjct: 10  YLKNLNDVYYTPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIVFNFAEALWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ Y+  +  ++     D     G  YG +  S+   +    +Q   IV+  + D
Sbjct: 70  LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYGHNN---TNQWHRIVELFKED 126

Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
             ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI  ++ S
Sbjct: 127 QDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPN 235
           ++ +   LA+ +    G++ H +   H+Y   F+ A+  L      +   + P+M    N
Sbjct: 187 FTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSVKKELSFPRMPKKDN 246

Query: 236 IVDL 239
             DL
Sbjct: 247 WEDL 250


>gi|189463012|ref|ZP_03011797.1| hypothetical protein BACCOP_03714 [Bacteroides coprocola DSM 17136]
 gi|260642224|ref|ZP_05414962.2| thymidylate synthase [Bacteroides finegoldii DSM 17565]
 gi|189430294|gb|EDU99278.1| hypothetical protein BACCOP_03714 [Bacteroides coprocola DSM 17136]
 gi|260623201|gb|EEX46072.1| thymidylate synthase [Bacteroides finegoldii DSM 17565]
          Length = 233

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 20/221 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y   L  +++ G  + +R G   +     ++    +    +  +  +  K +  EL 
Sbjct: 22  MNKYYQTLDKILQTGKIQTNRKG-RIKYLLNERLMLTPADLLDIFESHGIARKKLKEELK 80

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G  +V      G++ WD                  S+P Y   +   I+ I +  R
Sbjct: 81  LFMQGVRDVEKYKEAGITWWDY----------CGHTLVNSYPTYFEKLPPLITRINREKR 130

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++      +    A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 131 N---SKNYVLFLGETGVESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADIYH 185

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
             L    +A  +          LG+VH+Y N+ ++    LS
Sbjct: 186 LYL----MARQVELPLKSITLDLGNVHIYENNIDRTLELLS 222


>gi|167645964|ref|YP_001683627.1| thymidylate synthase [Caulobacter sp. K31]
 gi|167348394|gb|ABZ71129.1| thymidylate synthase [Caulobacter sp. K31]
          Length = 367

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 14/214 (6%)

Query: 22  TGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81
           T   T    G  +     +        K H  S + E +W++   + +  +  + +S + 
Sbjct: 29  TKGTTVEEHGVVLELTRPRARLSRAHMKGHVFSCIGEFIWYISCSNRLEPV-EYYISRYK 87

Query: 82  EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-IDK 140
           ++A+KDG +   YG      P   G    Q   + + L   P +R+ ++  ++    +  
Sbjct: 88  KFAEKDGTVWGAYG------PRIFGGDRSQYEVVKEMLSERPSTRKAVIQLFDREDVLQD 141

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFI 200
               PC C  QF V +G L+  ++ RS DV++G+P +I +++++  +LA  +GF+ G + 
Sbjct: 142 YNDIPCTCTMQFLVRDGMLNLVVHMRSNDVYMGLPHDIFAFTMIQEILAHDLGFKLGTYK 201

Query: 201 HTLGDVHLYNNHFEQADL------QLSRSPRTLP 228
           H +G  HLY++  E+ +       Q +R    +P
Sbjct: 202 HMVGSFHLYDHDREKVEQYLKEGFQPTREMPAMP 235


>gi|198276501|ref|ZP_03209032.1| hypothetical protein BACPLE_02696 [Bacteroides plebeius DSM 17135]
 gi|237710406|ref|ZP_04540887.1| predicted protein [Bacteroides sp. 9_1_42FAA]
 gi|198270589|gb|EDY94859.1| hypothetical protein BACPLE_02696 [Bacteroides plebeius DSM 17135]
 gi|229455868|gb|EEO61589.1| predicted protein [Bacteroides sp. 9_1_42FAA]
          Length = 212

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 20/221 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y   L  +++ G  + +R G   +     ++    +    +  +  +  K +  EL 
Sbjct: 1   MNKYYQTLDKILQTGKIQTNRKG-RIKYLLNERLMLTPADLLDIFESHGIARKKLKEELK 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G  +V      G++ WD                  S+P Y   +   I+ I +  R
Sbjct: 60  LFMQGVRDVEKYKEAGITWWDY----------CGHTLVNSYPTYFEKLPPLITRINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++      +    A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLFLGETGVESNQA--PCLSLVQFQIDEGELVLSAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
             L    +A  +          LG+VH+Y N+ ++    LS
Sbjct: 165 LYL----MARQVELPLKSITLDLGNVHIYENNIDRTLELLS 201


>gi|414442|gb|AAC43192.1| Homologous to Swiss-Prot Accession Number P13954, thymidylate
           synthetase [Mycoplasma genitalium]
          Length = 95

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)

Query: 169 DVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLP 228
           D+FLG+PFNIASY+LL  ++A     + G FIHTLGD H+Y NH EQ  LQL+R+    P
Sbjct: 1   DIFLGVPFNIASYALLVYLVAHETKLKPGYFIHTLGDAHIYENHIEQIKLQLTRTTLDPP 60

Query: 229 QMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           Q+++  +   + ++ ++D  L  Y  H  I  +V+V
Sbjct: 61  QVVLKSD-KSIFAYSFDDIELVGYNYHPFIYGRVAV 95


>gi|261880956|ref|ZP_06007383.1| thymidylate synthase [Prevotella bergensis DSM 17361]
 gi|270332260|gb|EFA43046.1| thymidylate synthase [Prevotella bergensis DSM 17361]
          Length = 212

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 20/220 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y D+L  +++ G  + ++ G   +     Q+    +    +  +  +  K + +EL 
Sbjct: 1   MNKYHDILEKIMRTGKMQHNKKG-NIKYCLNEQLTLTPADLLDIFESHGIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              V   S+P Y   +   I+ I    R
Sbjct: 60  LFMQGERQVEKYREAGINWWDY----------CGSVLVNSYPTYFEKLPPLIAKINNEKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++           A  PC  L QF +D G+L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLFLGETNAESNQA--PCLSLVQFQIDEGELVISAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             L    ++  I          L +VH+Y ++ E+    L
Sbjct: 165 LYL----MSRQIELPLKSITLNLANVHIYESNLERTQELL 200


>gi|322511194|gb|ADX06507.1| putative bifunctional dihydrofolate reductase-thymidylate synthase
           [Organic Lake phycodnavirus 2]
          Length = 115

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/113 (37%), Positives = 70/113 (61%)

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
            QF+V   KLSC LYQRSGD+ LG+PFNI SYS LT ++A     +  EFI+ +G+ H+Y
Sbjct: 1   MQFHVVENKLSCSLYQRSGDLGLGVPFNILSYSALTHLIAHHCHLEASEFIYHIGNAHVY 60

Query: 210 NNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKV 262
           ++H +   +Q+ + P    ++ IN +  ++  +   DF + +Y+ H ++  K+
Sbjct: 61  DDHLDALLVQVEKEPYEFSKVTINNHYDNISDYGINDFDITNYKSHDSVSLKM 113


>gi|224165617|ref|XP_002338837.1| predicted protein [Populus trichocarpa]
 gi|222873586|gb|EEF10717.1| predicted protein [Populus trichocarpa]
          Length = 82

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 30/82 (36%), Positives = 45/82 (54%)

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSF 242
           LLT ++A V     G+F+H +GD H+Y+ H      QL + P+  P + IN    D+ +F
Sbjct: 1   LLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQEQLRKLPKPFPILKINSEKKDIDTF 60

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
              DF L  Y+PH  I  K++V
Sbjct: 61  VAADFKLIGYDPHQKIEMKMAV 82


>gi|260575990|ref|ZP_05843984.1| thymidylate synthase [Rhodobacter sp. SW2]
 gi|259021689|gb|EEW24991.1| thymidylate synthase [Rhodobacter sp. SW2]
          Length = 358

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 6/212 (2%)

Query: 6   DLLRHVIKF-----GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           DL+R V K      G+   D +   +   FG  +     +     +  K    S + EL 
Sbjct: 11  DLMRVVFKQLLTGRGNFVVDSSKGKSTEVFGALLELKNPRARLSRSFSKAKAFSPLGELF 70

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
           W+L G   V ++  +  +      D+    G      +        +   +   ++++LR
Sbjct: 71  WYLSGSDRVEFIKHYIPNYPKLIKDEVTANGAYGPRIFGKEALAKRDGASEWDRVIRTLR 130

Query: 121 ADPYSRRHIVSAWNVALI-DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
               SR  +V  ++ +    K    PC C  QF + NG+L    + RS D F G+P ++ 
Sbjct: 131 EREGSRNALVQIYDNSDAKPKNGDKPCTCTIQFAIRNGQLLMHTHMRSNDAFFGLPHDVF 190

Query: 180 SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
           ++++L  + A  +G   G + H++  +HLY++
Sbjct: 191 TFTMLQEIAARELGLGLGRYSHSVTSLHLYHD 222


>gi|206973310|ref|ZP_03234232.1| thymidylate synthase [Bacillus cereus AH1134]
 gi|206732194|gb|EDZ49394.1| thymidylate synthase [Bacillus cereus AH1134]
          Length = 326

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 26/263 (9%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSK--GFPLLTTKKVHWKSVVHELLW 61
           YL+LL   I    +  D      +                 P+L  + ++    + E  W
Sbjct: 13  YLNLLVEAITKKVNITDSRNGPVKDLGPAYFEITNEDLLRVPILQERALNPFFALTEFSW 72

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
            + G + ++ L+   ++ +D ++D    L   YG + R         +DQ+   ++ L+ 
Sbjct: 73  IITGSNRLTPLNNF-INDFDRFSDDGFTLNGAYGHRLRELH-----GLDQLEKSIRILQE 126

Query: 122 DPYSRRHIVSAWNVALIDKMA-LPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           +  +RR +++ W++  +   +   PC+      + N  L   +  RS D+FLG+P+N+  
Sbjct: 127 EKSTRRVVLTMWHIDDLGSNSRDIPCNISIMLKIRNNLLDMTVINRSNDLFLGVPYNVVV 186

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLL 240
           + LL   +A  IG + G   H    +HLY+ HFE+             Q II  N ++ +
Sbjct: 187 FYLLQCYIAKKIGCKVGVQRHFTDSLHLYSQHFEKV------------QSIIQNNNLERI 234

Query: 241 SFRYEDFT---LRSY--EPHAAI 258
            + YE F    L +Y  E H  I
Sbjct: 235 KYMYEKFEKIDLSTYIDENHRYI 257


>gi|167837403|ref|ZP_02464286.1| thymidylate synthase [Burkholderia thailandensis MSMB43]
          Length = 124

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 12/117 (10%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M QYLDL+R ++  G+ + +RTG+ T    G  +RFDL +GFP +TTKK+ +KS + EL+
Sbjct: 1   MKQYLDLVRTILDTGAWKSNRTGIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 60

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIYGVQWRSWPDYD 105
            FLR   + +     G  +WD  A+++             +LG +YGVQWR WP Y 
Sbjct: 61  GFLRATRSAADFRALGCKVWDANANENAQWLANPYRRGVDDLGDVYGVQWRRWPGYK 117


>gi|238798208|ref|ZP_04641694.1| Deoxyuridylate hydroxymethyltransferase [Yersinia mollaretii ATCC
           43969]
 gi|238717945|gb|EEQ09775.1| Deoxyuridylate hydroxymethyltransferase [Yersinia mollaretii ATCC
           43969]
          Length = 335

 Score =  115 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 8/201 (3%)

Query: 37  DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGV 96
           +  + F ++  +K +  + + E +W L G  ++ +L  H +    E++D +      YG 
Sbjct: 20  NPRERFLVIPERKNNVFAQLAETIWVLAGRGDLEFLQ-HYLPRSIEFSDDNKTWRAAYGP 78

Query: 97  QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV-ALIDKMALPPCHCLFQFYVD 155
           + R+W        DQ+S ++  L+ DP ++R ++S ++  +        PC+   QF   
Sbjct: 79  RLRNWM----GKTDQVSCVISRLQEDPNTKRAVMSLFDPMSDYSDTKDVPCNNWLQFIQR 134

Query: 156 NGKLSCQLYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE 214
           +  L   +  R+ D   G    N   +S+L  ++A+ +G+Q G     +G  H+Y+ H+ 
Sbjct: 135 DNILYLHVTVRANDAIWGFSGINFFEWSVLHEIVATTLGYQVGTLSWYVGTFHIYSRHYN 194

Query: 215 QADLQLS-RSPRTLPQMIINP 234
            +   L  ++P++  +  I P
Sbjct: 195 TSRDLLRIKNPKSPYECGIEP 215


>gi|224535318|ref|ZP_03675857.1| hypothetical protein BACCELL_00179 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224523044|gb|EEF92149.1| hypothetical protein BACCELL_00179 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 212

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 90/223 (40%), Gaps = 20/223 (8%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  ++  G  + ++ G   R     Q+    +    +     +  K + +EL 
Sbjct: 1   MNKYYMILEKILVLGKMQDNKKG-NIRCLLNEQLVLTPADLLDIFEGHSIARKKLKNELQ 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F++G+  V      G++ WD              +   S+P Y   +   I+ I +  R
Sbjct: 60  LFMQGERCVEKYREAGINWWDY----------CGAILVNSYPSYFEKLPPLIAKINREKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++      +    A  PC  L QF +D  +L    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLHLGATGVESNQA--PCLSLVQFQIDESELVISAYQRSSDANLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
             L    ++  I          LG+VH+Y N+ E+    +S  
Sbjct: 165 LYL----MSRQIELPLKSITLNLGNVHIYENNIEKTRSLISGE 203


>gi|325298325|ref|YP_004258242.1| thymidylate synthase [Bacteroides salanitronis DSM 18170]
 gi|324317878|gb|ADY35769.1| thymidylate synthase [Bacteroides salanitronis DSM 18170]
          Length = 215

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 20/222 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           ++Y  +L  ++  G  + +R G   R     ++    +    +     +  K +  EL  
Sbjct: 5   NKYHCILEKIVCSGKTQTNRKG-NIRYLLNERLDLTPADLLEIFEGHNLARKKLKSELEL 63

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA 121
           F RG+ NV      G++ WD                  S+P Y   +   I  I +  R 
Sbjct: 64  FTRGERNVDRYREAGITWWDY----------CGKTLVNSYPTYLERLPPLIDRINREKRN 113

Query: 122 DPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASY 181
              S+ +++      +    A  PC  L QF +++G+L    YQRS D  LG+P +I   
Sbjct: 114 ---SKNYVLFLGETGVESNQA--PCLSLVQFQIEDGELVISAYQRSSDANLGLPADIYH- 167

Query: 182 SLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
                 +A  I         T G+VH+Y N+ E     LS  
Sbjct: 168 ---LYSIARQIELPLKSITLTFGNVHVYENNIENTYRLLSGE 206


>gi|94496508|ref|ZP_01303085.1| Thymidylate synthase [Sphingomonas sp. SKA58]
 gi|94424254|gb|EAT09278.1| Thymidylate synthase [Sphingomonas sp. SKA58]
          Length = 78

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/78 (42%), Positives = 41/78 (52%)

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYED 246
           MLA     + GE I   GDVHLY NH    + QLSR P+  P + IN     +  +R ED
Sbjct: 1   MLAQQCDLEPGEVIWQGGDVHLYLNHAPLVEEQLSRIPQGAPTLRINRQPSSIFDYRIED 60

Query: 247 FTLRSYEPHAAILAKVSV 264
           F +  Y P A I A V+V
Sbjct: 61  FEVLDYSPQAHIAAPVAV 78


>gi|146737945|gb|ABQ42561.1| thymidylate synthase [Peanut witches'-broom phytoplasma]
          Length = 88

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/86 (53%), Positives = 70/86 (81%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M +YL+L R ++K+G+ R +RT V T+S FGY MRF+L++GFPLLTTKK+++  V+HELL
Sbjct: 1  MEKYLNLCRTILKYGNIRENRTKVLTKSIFGYHMRFNLTQGFPLLTTKKINFNLVIHELL 60

Query: 61 WFLRGDSNVSYLHRHGVSIWDEWADK 86
          WF++GD+N+ YL ++ V+IW+EW  +
Sbjct: 61 WFIKGDTNIRYLVQNKVNIWNEWPYE 86


>gi|305664003|ref|YP_003860291.1| thymidylate synthase [Ignisphaera aggregans DSM 17230]
 gi|304378572|gb|ADM28411.1| thymidylate synthase [Ignisphaera aggregans DSM 17230]
          Length = 241

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 79  IWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALI 138
           I D   +K    G  Y  +  ++   DG +++QI  IV+ LR  PY+RR     W     
Sbjct: 79  IHDYLVEK---FGYTYHERLFAYRLPDGRIVNQIEKIVEKLRKTPYTRRAQAITWQPWKD 135

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGE 198
            +   PPC     F V +GKL   ++ RS D F     N+ +++ L   +A+ +G + G 
Sbjct: 136 LETEHPPCLQRIWFRVIDGKLVMHIHMRSNDAFKAAFMNMYAFTELQRFVANELGVEPGR 195

Query: 199 FIHTLGDVHLYNNHFEQADL 218
           +IH     H+Y   ++  + 
Sbjct: 196 YIHIADSYHVYERDWKWFEK 215


>gi|325953737|ref|YP_004237397.1| thymidylate synthase [Weeksella virosa DSM 16922]
 gi|323436355|gb|ADX66819.1| thymidylate synthase [Weeksella virosa DSM 16922]
          Length = 211

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 20/221 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           M++Y  +L  +IK G  + ++ G  T      ++    +    +     +    +  EL 
Sbjct: 1   MNKYHIILDKIIKKGKVQSNKKGNITY-LLNQKLELKPTDLLEIFEEHGIARNKLKTELE 59

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            F +G+        +G+  WD              +   S+P Y   + D I  I +  R
Sbjct: 60  LFTKGERLTERYRENGIEWWDY----------CGPILVNSYPTYFEQLPDLIKKINKEKR 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S+ +++      +       PC  L QF ++ GKL    YQRS D  LG+P +I  
Sbjct: 110 N---SKNYVLFLGRTDVESNQQ--PCLSLVQFQIEKGKLIISAYQRSSDASLGLPADIYH 164

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
             L    ++  I          L +VH+Y N+ E     L 
Sbjct: 165 LYL----ISRQINLPLKSITLMLANVHIYENNVEPTKSLLQ 201


>gi|330507653|ref|YP_004384081.1| thymidylate synthase, methanogen type [Methanosaeta concilii GP-6]
 gi|328928461|gb|AEB68263.1| thymidylate synthase, methanogen type [Methanosaeta concilii GP-6]
          Length = 245

 Score =  111 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 73/213 (34%), Gaps = 20/213 (9%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           L  + + G +  D  G   R     Q+  +             + + +  E  W      
Sbjct: 47  LNLIWRQGEEISDERGTKIRELLSLQVVVENP-----------YQEMIPEEYSW------ 89

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N   L  +           +      YG + R+W       +DQI   +Q L+  P +RR
Sbjct: 90  NEERLEEYA---HQLLCGDNPGFEYTYGERLRAWRLPGTPPLDQIDMAIQRLKESPATRR 146

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
                W   +  +    PC  +  F +  G+L   ++ RS D     P N+   + L   
Sbjct: 147 ATSVTWIPPVDGERNEVPCMIVDDFKLRGGRLHLAIFFRSHDFAGAYPANLYGLARLLEY 206

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            A  +G Q G    T    H+Y + ++  +  L
Sbjct: 207 AAREVGAQPGSISTTSSSAHIYEHDWDWIEEML 239


>gi|169634660|ref|YP_001708396.1| putative thymidylate synthase [Acinetobacter baumannii SDF]
 gi|87299249|emb|CAJ77006.1| Thymidylate synthase [Acinetobacter baumannii]
 gi|169153452|emb|CAP02595.1| putative Thymidylate synthase [Acinetobacter baumannii]
          Length = 222

 Score =  111 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 87/207 (42%), Gaps = 12/207 (5%)

Query: 11  VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70
           +++ G       G          +  +  +    ++  +    S + E  W+L G  ++ 
Sbjct: 19  ILENGDHITASKGEN-FEVRNAVLTLENPRSRLSISETRSKLISCIGEFFWYLNGSDSLE 77

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
           ++  +   I D     + ++           P   G   +Q + I++ L+  P SRR ++
Sbjct: 78  FIEYY---ISDYRKYIEYQIDENKPALGAYGPRIFGAQ-NQFNKIIEVLKDKPTSRRAVI 133

Query: 131 SAWNVALI--DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM-- 186
           S ++   +  +     PC CL QF++ N +L      RS D  +G+  +I S++L+    
Sbjct: 134 SIYSKDDLLREDSRDIPCTCLLQFFIRNERLHLTATMRSNDAAIGLVHDIFSFTLIQELL 193

Query: 187 ---MLASVIGFQYGEFIHTLGDVHLYN 210
              ++  +   Q GE+ H +G +H+Y 
Sbjct: 194 LAKLIRYIPNLQLGEYTHIVGSLHIYK 220


>gi|240276635|gb|EER40146.1| thymidylate synthase [Ajellomyces capsulatus H143]
          Length = 209

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/124 (39%), Positives = 65/124 (52%), Gaps = 27/124 (21%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY-QMRFDLSKG--------------FPLLT 46
           HQYL L+R +++ G  R DRTG GTRS F   Q+RF LSK                PLLT
Sbjct: 47  HQYLRLIRSILETGEHRPDRTGTGTRSLFAPPQLRFSLSKRTTSNPTSTSSRTPVLPLLT 106

Query: 47  TKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD------------GELGPIY 94
           TK+V  ++V+ ELLWF+ G ++   L   GV IWD    ++            G+LGP+Y
Sbjct: 107 TKRVFLRAVIAELLWFISGSTSSLPLSEAGVKIWDGNGSREYLDSVGLSHRAVGDLGPVY 166

Query: 95  GVQW 98
           G   
Sbjct: 167 GFHG 170


>gi|124484937|ref|YP_001029553.1| hypothetical protein Mlab_0109 [Methanocorpusculum labreanum Z]
 gi|124362478|gb|ABN06286.1| thymidylate synthase [Methanocorpusculum labreanum Z]
          Length = 239

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 21/205 (10%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW--FLRG 65
           +R++++ GS      G  T  T    +  D     P+++     +K    E      + G
Sbjct: 17  IRYILEKGSLLTTENGEETVETDEVCLFVDTPLAKPMVSP-CSRFKEAFLEAYARNLIDG 75

Query: 66  DSNVSYLHRHGVSI-WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124
             +V     HG    W     ++GE+                   DQI  I+  LR  P 
Sbjct: 76  SDSVFEYDYHGRLFDWGCGLTQNGEIHQ-----------------DQIQYIIDKLRECPV 118

Query: 125 SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           SRR +   W   +  K+A  PC  L Q  V +GKL+ ++  RS D+      N+ + + L
Sbjct: 119 SRRAVAVTWCPPVDAKLADCPCLQLVQCVVRDGKLNMKIVFRSNDMLSAAGSNMFALAKL 178

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLY 209
              +A  IG + G + H     H+Y
Sbjct: 179 QEYIAEKIGVEVGTYTHISLVPHVY 203


>gi|115299484|gb|ABI93712.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
          Length = 95

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/95 (52%), Positives = 64/95 (67%), Gaps = 8/95 (8%)

Query: 92  PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN + + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDCQSDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           PPCH + QF+V NGKLSC +YQRS D  LGIPFNI
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95


>gi|115299502|gb|ABI93721.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
 gi|115299510|gb|ABI93725.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
          Length = 96

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 8/96 (8%)

Query: 89  ELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +L P+YG QWR +         DY+   +DQ+  ++Q L+ +P SRR I+SAWN + + +
Sbjct: 1   DLDPVYGFQWRHFGAEYKDCQSDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLKQ 60

Query: 141 MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           MALPPCH + QF+V NGKLSC +YQRS D  LGIPF
Sbjct: 61  MALPPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPF 96


>gi|115299486|gb|ABI93713.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
 gi|115299492|gb|ABI93716.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
          Length = 95

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/95 (52%), Positives = 64/95 (67%), Gaps = 8/95 (8%)

Query: 92  PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN + + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           PPCH + QF+V NGKLSC +YQRS D  LGIPFNI
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95


>gi|115299512|gb|ABI93726.1| dihydrofolate reductase-thymidylate synthase [Paramecium biaurelia]
          Length = 93

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 8/93 (8%)

Query: 92  PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY+   +DQ+  ++Q L+ +P SRR I+SAWN + +++MAL
Sbjct: 1   PVYGYQWRHFGAEYKDCQSDYNNQGVDQVKEVIQLLKNNPDSRRIILSAWNPSDLEQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           PPCH + QF+V NGKLSC +YQRS D+ LGIPF
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQRSCDLGLGIPF 93


>gi|73668429|ref|YP_304444.1| thymidylate synthase [Methanosarcina barkeri str. Fusaro]
 gi|121725683|sp|Q46E28|TYSY_METBF RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|72395591|gb|AAZ69864.1| thymidylate synthase [Methanosarcina barkeri str. Fusaro]
          Length = 217

 Score =  108 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 12/164 (7%)

Query: 54  SVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQIS 113
            + HE  W      N   L  +   +     +   +    YG + R+W       +DQI 
Sbjct: 59  RIPHETAW------NEERLEEYAKQL--ISGENTQDFEYTYGQRLRNWH----GKVDQID 106

Query: 114 SIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLG 173
            +++ L+ +P SRR I   W   +  K+   PC  L  F + +GK+      RS D    
Sbjct: 107 YVIEKLQQNPTSRRAIAVTWIPPVDTKVNEVPCMMLDDFKIRDGKIHLTTLFRSHDFGGA 166

Query: 174 IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
            P N+   S L   +A  +G + G         H+Y++ ++  +
Sbjct: 167 YPANLYGLSKLLEYVADKVGTKPGTITTISISAHIYDHDWDMVE 210


>gi|115299488|gb|ABI93714.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
          Length = 95

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 8/95 (8%)

Query: 92  PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN   + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           PPCH + QF+V NGKLSC +YQRS D  LGIPFNI
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95


>gi|330899059|gb|EGH30478.1| thymidylate synthase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 113

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 11/104 (10%)

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMI 231
           +G PFN+   + L  ++  + G+    F + +GD H+Y NH +  + Q++R P  +P+++
Sbjct: 10  IGTPFNLTEGAALLSLIGRLTGYTPRWFTYFIGDAHVYENHLDMLNEQMTREPYPMPKLV 69

Query: 232 INPNIVDLLS-----------FRYEDFTLRSYEPHAAILAKVSV 264
           I+  + +                  DFTL  Y+ H A+ A ++V
Sbjct: 70  ISDRVPEFAKTGVYQPEWLELIEPSDFTLEGYQHHPAMTAPMAV 113


>gi|116754022|ref|YP_843140.1| thymidylate synthase [Methanosaeta thermophila PT]
 gi|116665473|gb|ABK14500.1| Thymidylate synthase [Methanosaeta thermophila PT]
          Length = 215

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 4/135 (2%)

Query: 86  KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
           ++      YG + RSW       +DQI+ IV  L+ +P +RR     W   +  K    P
Sbjct: 79  ENPGFEYTYGERLRSWN----GEVDQIAEIVNRLKRNPRTRRATAVTWIPQVDHKREEVP 134

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           C  +  F + + +L+  +  RS D     P N+ + S L   ++   G   G        
Sbjct: 135 CMVVCDFKIRSSRLNLTVMFRSHDFAGAYPANVYALSKLLHHVSRESGSVPGSLTTLSAS 194

Query: 206 VHLYNNHFEQADLQL 220
            H+Y + ++  +  +
Sbjct: 195 AHIYEHDWDWVEGLI 209


>gi|115299490|gb|ABI93715.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           tetraurelia]
          Length = 95

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 8/95 (8%)

Query: 92  PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN   + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDRQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           PPCH + QF+V NGKLSC +YQRS D  LGIPFNI
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNI 95


>gi|304314929|ref|YP_003850076.1| thymidylate synthase [Methanothermobacter marburgensis str.
           Marburg]
 gi|1717846|sp|P80305|TYSY_METTM RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|2127679|pir||S62192 probable thymidylate synthase (EC 2.1.1.45) - Methanobacterium
           thermoautotrophicum (strain Marburg)
 gi|1103708|emb|CAA63063.1| deoxyuridylate hydroxymethylase (TysY) [Methanothermobacter
           thermautotrophicus]
 gi|302588388|gb|ADL58763.1| thymidylate synthase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 223

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 77/224 (34%), Gaps = 24/224 (10%)

Query: 5   LDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF-------PLLTTKKVHWKSVVH 57
           L L+  ++  G + RD  G  TR      +      G        P  +   +       
Sbjct: 15  LKLVEKIMSDGREIRDERGSLTREVMNTVVTIKNPLGRSGDFYHLPARSLINIRVPEGY- 73

Query: 58  ELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
               F  G+          +  + E    D   G +Y    R    +    +DQ+   ++
Sbjct: 74  ----FWSGE---------KLEKYSEQFLSDDRKGFVYTYGNRLRAHF---GVDQVDRAIE 117

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
            L+    SRR  +  W+  +  +    PC  L  F V  G+L      RS D++     N
Sbjct: 118 RLKNCKESRRATMVTWDPKIDTESDEVPCMILVDFKVREGRLFTTALWRSHDIYGAWFPN 177

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
               + L   +AS +G + G         H+Y  +F++A   + 
Sbjct: 178 AVGLAYLADHVASEVGVEVGHITIHSISAHIYEVNFKEAKEVIK 221


>gi|37651515|ref|NP_932389.1| dCMP hydroxymethylase [Aeromonas phage 44RR2.8t]
 gi|34732815|gb|AAQ81353.1| dCMP hydroxymethylase [Aeromonas phage 44RR2.8t]
          Length = 231

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 24/227 (10%)

Query: 8   LRHVIKF----GSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           +R ++      G    D+TGV T        + D    F  L    +       EL W+L
Sbjct: 9   IRDILAQRFAAGEFVTDKTGVKTIEIAPVMFKADEPLIFGKLNNDYIE-----RELAWYL 63

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
                V  +      IW+  +D +G +   YG  W    D +G+   Q ++++  L +DP
Sbjct: 64  SQSRYVHDIPGKTPVIWEAVSDSEGRINSNYG--WAILSDENGS---QFANVLMHLASDP 118

Query: 124 YSRRHIVSAWNVALIDK-----MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
            +RR  +      + +      M+   C    Q+ + +GKL+  ++ RS D   G   + 
Sbjct: 119 NTRRANMIYTRPTMHEDYKANGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDW 178

Query: 179 A-----SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           A        L+  + +  +  + G+    +  +H+Y  HF   +  +
Sbjct: 179 AWQDYVLKRLVDKLQSREVMVEKGDIYWCVDSIHVYERHFPMIEKYI 225


>gi|207742054|ref|YP_002258446.1| thymidylate synthase protein [Ralstonia solanacearum IPO1609]
 gi|206593440|emb|CAQ60367.1| putative thymidylate synthase protein [Ralstonia solanacearum
           IPO1609]
          Length = 283

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 85/159 (53%), Gaps = 11/159 (6%)

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           + G + +S++  + +S +DE++D    +   YG +      ++   ++Q+S++++ L  +
Sbjct: 1   MAGSNELSFIQ-YYISRYDEFSDDGNTVHGAYGPRL-----FNMRGVNQVSNVIEKLSGN 54

Query: 123 PYSRRHIVSAWNVALID-----KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
             +RR ++  +N   +           PC C  QF +   +L   +  RS D +LG+P +
Sbjct: 55  NDTRRAVIQLFNAEDLGCDVAVGRKDIPCTCTMQFSLRARQLHMFVTMRSNDAYLGLPHD 114

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           I ++++L  ++A  +G + G + H +G +HLY+ + +QA
Sbjct: 115 IFAFTMLQEIVARAVGAELGTYKHAVGSLHLYSKNTDQA 153


>gi|220906251|ref|YP_002481562.1| thymidylate synthase [Cyanothece sp. PCC 7425]
 gi|219862862|gb|ACL43201.1| thymidylate synthase [Cyanothece sp. PCC 7425]
          Length = 508

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 13/180 (7%)

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
           ++  +   I ++   ++G +   YG + RSW        DQI  +++ L  D  S R ++
Sbjct: 248 FIRDYIAHILEDATVQEG-VKYTYGQRLRSWFGR-----DQIQQVIEKLSEDLDSARAVM 301

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           S W+VA  +  A PPC       +  G+LS     RS D+F   P N      L   L  
Sbjct: 302 SLWDVADHEAQASPPCLNHLWVRIVEGELSLTATFRSNDMFSAWPANAMGLRALQQHLRD 361

Query: 191 VIG------FQYGEFIHTLGDVHLYNNHFEQADLQL-SRSPRTLPQMIINPNIVDLLSFR 243
            I          G  I      H+Y++ +E AD  L ++ P   P+   +P    L+S  
Sbjct: 362 RISQNIAQPLHLGPLITLSQSAHIYDDCWENADRLLQTQYPHCQPRTYSDPAGSFLISLE 421


>gi|115299494|gb|ABI93717.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           primaurelia]
          Length = 93

 Score =  106 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 8/93 (8%)

Query: 92  PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         +Y    +DQ+  I+Q L+ +P SRR I+SAWN + + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDCQSEYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPSDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           PPCH + Q +V NGKLSC +YQRS D  LGIPF
Sbjct: 61  PPCHVMSQSFVANGKLSCMMYQRSCDFGLGIPF 93


>gi|2160270|dbj|BAA03157.1| thymidylate synthase [Methylobacillus glycogenes]
          Length = 64

 Score =  106 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 53/64 (82%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M  Y DL+RHV++ G  + DRTG GT S FGYQMRFDL++GFPLLTTKKVH KS++HELL
Sbjct: 1  MKVYHDLMRHVLEHGHKKEDRTGTGTLSVFGYQMRFDLAEGFPLLTTKKVHLKSIIHELL 60

Query: 61 WFLR 64
          WFL+
Sbjct: 61 WFLQ 64


>gi|189427010|ref|YP_001950109.1| deoxyuridylate hydroxymethyltransferase [Ralstonia phage RSL1]
 gi|189233322|dbj|BAG41679.1| deoxyuridylate hydroxymethyltransferase [Ralstonia phage RSL1]
          Length = 414

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 88/249 (35%), Gaps = 26/249 (10%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFD-LSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           L  +   G     R G   R        +    +       +  +    + E LW L G 
Sbjct: 59  LETICTVGLKTDSRNGPVIRFPTPVTSVYTHPRQRVSFDAVRDANPFLHLMEALWMLAGR 118

Query: 67  SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126
           ++V +   +   +  E+ D    L   YG +WR          DQ+++I+  L+ +P SR
Sbjct: 119 NDVEFASYYAKQML-EYTDDGSTLNGAYGFRWRQHF-----GYDQLNAIIDELKKNPASR 172

Query: 127 RHIVSAWNVA------------------LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSG 168
           R ++  W+ +                  L       PC+    F    GKL+  +  RS 
Sbjct: 173 RCVLQMWDASREFYSREDSWAVRRESDLLNQGSKDLPCNTSVMFDAQLGKLNMTVTNRSN 232

Query: 169 DVFLG-IPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           D+  G    N+  +S+L   +A   G   G +     ++H+Y          +  +    
Sbjct: 233 DMIWGCYGANVVHFSMLHEYVAEKCGLPLGHYYQVSNNLHVYLEFDITKRFIVDTTYGVQ 292

Query: 228 PQMIINPNI 236
           P +   P++
Sbjct: 293 PVLRKGPDV 301


>gi|167841922|ref|ZP_02468606.1| thymidylate synthase [Burkholderia thailandensis MSMB43]
          Length = 288

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 16/223 (7%)

Query: 6   DLLR----HVIKFGSDRRDRTGVGTRST-FGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
           DL+R    +++K G   + R G   ++    Y ++   S+   L    K   + +  ELL
Sbjct: 28  DLVRQGIHNIVKEGRKIKSRAGDAMQAYGVNYILKDPRSRVHSLRNGAK---RYLCRELL 84

Query: 61  WFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
            +  G         +    W    DKDG +   YG     + +      +Q + IV  L+
Sbjct: 85  AYFSGSLKAENGLANASKFWMTLTDKDGNVNSNYGYYV--FYEPVEKYGNQYNWIVSMLK 142

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           ++  SRR I++             PC    QF++    L C+   RS DV  G+P+++  
Sbjct: 143 SNQDSRRAIININQNYHKSDTKDFPCTIGMQFFIRENHLFCETISRSTDVITGLPYDMGF 202

Query: 181 YSLLTMMLASVI------GFQYGEFIHTLGDVHLYNNHFEQAD 217
           +S +  ++ S +        Q G  I       +Y+N  E+A 
Sbjct: 203 FSFVHELVHSDLVSQGYDDLQLGSTIMKTTFTQIYDNAMEKAK 245


>gi|66391837|ref|YP_238762.1| gp42 dCMP hydroxymethylase [Aeromonas phage 31]
 gi|62114674|gb|AAX63522.1| gp42 dCMP hydroxymethylase [Aeromonas phage 31]
          Length = 231

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 88/225 (39%), Gaps = 20/225 (8%)

Query: 6   DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRG 65
           D+L           D+TGV T        + D    F  L    +       EL W+L  
Sbjct: 11  DILARRFNNDEFVTDKTGVKTVEIAPVMFKADEPLIFGKLNNDYIE-----RELAWYLSQ 65

Query: 66  DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYS 125
              V  +     +IW+  AD DG +   YG  W    D +G+   Q ++++  L +DP +
Sbjct: 66  SRYVHDIPGKTPAIWEAVADSDGRINSNYG--WAILSDENGS---QFANVLMHLASDPNT 120

Query: 126 RRHIVSAWNVALIDK-----MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA- 179
           RR  +      + +      M+   C    Q+ + +GKL+  ++ RS D   G   + A 
Sbjct: 121 RRANMIYTRPTMHEDYKAHGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDWAW 180

Query: 180 ----SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
                  L+  + +  I  + G+    +  +H+Y  HF   +  +
Sbjct: 181 QDYVLKRLVDKLQSREIMVEKGDIYWCVDSLHVYERHFPMIEKYI 225


>gi|148550216|ref|YP_001270318.1| thymidylate synthase-like protein [Pseudomonas putida F1]
 gi|148514274|gb|ABQ81134.1| Thymidylate synthase-like protein [Pseudomonas putida F1]
          Length = 113

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 11/105 (10%)

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQM 230
            LG PFN+   + L  +   + G+    F + +GD H+Y NH +  + QL R P   P++
Sbjct: 9   PLGTPFNLTEGAALLSLFGRLTGYTPRWFTYFIGDAHVYENHLDMLNEQLKREPLEAPKL 68

Query: 231 IINPNIVDL-----------LSFRYEDFTLRSYEPHAAILAKVSV 264
           +I+  +                    DF L  YE HA + A ++V
Sbjct: 69  VISDRVPSFAETGKYEPEWLEKIEPSDFWLEGYEHHAPMTAPMAV 113


>gi|307352585|ref|YP_003893636.1| thymidylate synthase, methanogen type [Methanoplanus petrolearius
           DSM 11571]
 gi|307155818|gb|ADN35198.1| thymidylate synthase, methanogen type [Methanoplanus petrolearius
           DSM 11571]
          Length = 240

 Score =  105 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 2/120 (1%)

Query: 102 PDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSC 161
            D DG  IDQ+  +++ L+A+P SRR     W     D+   PPC    Q +V +G+L+ 
Sbjct: 101 GDGDGKGIDQVEYLIEKLKAEPNSRRAEAITWFPPKDDQSDNPPCLQRIQCFVRDGRLNM 160

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +  RS D+   +  N+ +   L  M+A  +    G + HT    H+Y  H    D  + 
Sbjct: 161 HVDFRSNDMLSALGANMYALVHLQKMIADRLKADVGWYSHTSVSAHMY--HERDHDELMK 218


>gi|21227339|ref|NP_633261.1| thymidylate synthase [Methanosarcina mazei Go1]
 gi|25091471|sp|Q8PXI1|TYSY_METMA RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|20905695|gb|AAM30933.1| Thymidylate synthase [Methanosarcina mazei Go1]
          Length = 217

 Score =  105 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 4/129 (3%)

Query: 89  ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           +    YG + R+W       +DQI  +++ L+  P SRR     W   +  K+   PC  
Sbjct: 86  DFEYTYGQRLRNWN----GEVDQIEYVIEKLKESPTSRRATAVTWIPPVDTKVNEVPCMI 141

Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           L  F + + K+      RS D     P N+   S L   +A  +G + G         H+
Sbjct: 142 LDDFKIRDEKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAEKVGVEPGVITTVSISAHV 201

Query: 209 YNNHFEQAD 217
           Y++ ++  +
Sbjct: 202 YDHDWDMVE 210


>gi|90580552|ref|ZP_01236357.1| thymidylate synthase [Vibrio angustum S14]
 gi|90438210|gb|EAS63396.1| thymidylate synthase [Photobacterium angustum S14]
          Length = 99

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%)

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPRTLPQ 229
            LG+ FN      L  ++A + G + G+  H + + H+Y +  E   D+QL R+P   PQ
Sbjct: 1   MLGLNFNQVQVFTLLALMAQITGHKAGQAYHKIINAHIYEDQLELMRDVQLKRTPFASPQ 60

Query: 230 MIINPNIVDLLSF----RYEDFTLRSYEPHAAILAKVSV 264
           + IN  I  L         +DF +  YE H AI    SV
Sbjct: 61  LKINQKIKSLEDLETWVTLDDFEVVGYEHHDAIQYPFSV 99


>gi|115299496|gb|ABI93718.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           primaurelia]
          Length = 93

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 8/93 (8%)

Query: 92  PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN   I +MAL
Sbjct: 1   PVYGFQWRHFGAQYKDCQSDYTNQGVDQVKEIIQQLKNNPDSRRIILSAWNPMDIKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           PPCH + QF+V NGKL+C +YQRS D  LGIPF
Sbjct: 61  PPCHVMSQFFVSNGKLNCMMYQRSCDFGLGIPF 93


>gi|6686334|sp|O26868|TYSY_METTH RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
          Length = 222

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 14/217 (6%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRF--DLSKGFPLLTTKKVHWKSVVHELLWFLR 64
           L+  ++  G + RD  G  TR      +     L K       ++    ++     +F  
Sbjct: 17  LVEKIMHDGREIRDERGSLTREVMNTVVTIKKPLGKSDDFYHIRRGSLLNIKVPEGYFWS 76

Query: 65  GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124
           G+     L ++         D+ G +          +       +DQ+   ++ L+    
Sbjct: 77  GE----KLEKYSEQF--LSGDRKGFVYTYGNRLRAHF------GVDQLDEAIRRLKNCTE 124

Query: 125 SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           SRR  +  W+          PC  L  F + +G+L      RS D++     N    + L
Sbjct: 125 SRRATMVTWDPPEDTASDEVPCMILVDFKIRDGRLFTTALWRSHDIYGAWFPNAVGLAYL 184

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
              +A+ +G + G         H+Y  +F++A+  + 
Sbjct: 185 ADHVAAEVGVEVGHITIHSISAHIYEVNFKEAEEVIK 221


>gi|15678799|ref|NP_275916.1| thymidylate synthase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|2621865|gb|AAB85277.1| thymidylate synthase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 227

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 14/217 (6%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRF--DLSKGFPLLTTKKVHWKSVVHELLWFLR 64
           L+  ++  G + RD  G  TR      +     L K       ++    ++     +F  
Sbjct: 22  LVEKIMHDGREIRDERGSLTREVMNTVVTIKKPLGKSDDFYHIRRGSLLNIKVPEGYFWS 81

Query: 65  GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124
           G+     L ++         D+ G +          +       +DQ+   ++ L+    
Sbjct: 82  GE----KLEKYSEQF--LSGDRKGFVYTYGNRLRAHF------GVDQLDEAIRRLKNCTE 129

Query: 125 SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           SRR  +  W+          PC  L  F + +G+L      RS D++     N    + L
Sbjct: 130 SRRATMVTWDPPEDTASDEVPCMILVDFKIRDGRLFTTALWRSHDIYGAWFPNAVGLAYL 189

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
              +A+ +G + G         H+Y  +F++A+  + 
Sbjct: 190 ADHVAAEVGVEVGHITIHSISAHIYEVNFKEAEEVIK 226


>gi|115299498|gb|ABI93719.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           primaurelia]
          Length = 93

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 8/93 (8%)

Query: 92  PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY    +DQ+  I+Q L+ +P SRR I+SAWN   + +MAL
Sbjct: 1   PVYGFQWRHFGAKYKDCQTDYSNQGVDQVKEIIQLLKNNPDSRRIILSAWNPIDLKQMAL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           PPCH + QF+V NGKLSC +YQ S D  LGIPF
Sbjct: 61  PPCHVMSQFFVANGKLSCMMYQSSCDFGLGIPF 93


>gi|20093327|ref|NP_619402.1| thymidylate synthase [Methanosarcina acetivorans C2A]
 gi|19918687|gb|AAM07882.1| thymidylate synthase [Methanosarcina acetivorans C2A]
          Length = 230

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 4/129 (3%)

Query: 89  ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           +    YG + R+W       +DQI  +++ L+  P SRR     W   +  K+   PC  
Sbjct: 99  DFEYTYGQRLRNWN----EEVDQIEYVIEKLQESPTSRRATAVTWIPPVDTKVNEVPCMI 154

Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           L  F + +GK+      RS D     P N+   S L   +A  +G + G         H+
Sbjct: 155 LDDFKIRDGKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAGRVGVEPGMITTVSISAHV 214

Query: 209 YNNHFEQAD 217
           Y++ ++  +
Sbjct: 215 YDHDWDMVE 223


>gi|25091474|sp|Q8THH4|TYSY_METAC RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
          Length = 217

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 4/129 (3%)

Query: 89  ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           +    YG + R+W       +DQI  +++ L+  P SRR     W   +  K+   PC  
Sbjct: 86  DFEYTYGQRLRNWN----EEVDQIEYVIEKLQESPTSRRATAVTWIPPVDTKVNEVPCMI 141

Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           L  F + +GK+      RS D     P N+   S L   +A  +G + G         H+
Sbjct: 142 LDDFKIRDGKVHLTTLFRSHDFGGAYPANLYGLSKLLEYVAGRVGVEPGMITTVSISAHV 201

Query: 209 YNNHFEQAD 217
           Y++ ++  +
Sbjct: 202 YDHDWDMVE 210


>gi|312136483|ref|YP_004003820.1| thymidylate synthase, methanogen type [Methanothermus fervidus DSM
           2088]
 gi|311224202|gb|ADP77058.1| thymidylate synthase, methanogen type [Methanothermus fervidus DSM
           2088]
          Length = 223

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 16/214 (7%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFG--YQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLR 64
           L+  V++ G   +D  G  T+        +++ +      ++T K    S+  +  W  R
Sbjct: 17  LVSLVMEKGHKIKDERGQITKELLNILTIVKYPIKNYPFPISTNKEILLSIPKDYYW--R 74

Query: 65  GDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY 124
           GD    Y  +          DK G +   YG + R     D   +DQI +I++ L+    
Sbjct: 75  GDKLSKYTDQFLKK------DKKGFV-YTYGNRLR-----DHFSVDQIKAIIKRLKKCKK 122

Query: 125 SRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           SRR     W+  +  K    PC     F + N KL      RS D++     N A+ ++L
Sbjct: 123 SRRATAVTWDPKIDFKNEEVPCMISIDFKIRNNKLHTTGIWRSHDIYQAWLPNAAALAIL 182

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
              ++  +  + G         H+Y   F+ A+ 
Sbjct: 183 AKYISDKLNIKVGPLAIHSISAHIYEYCFDDAEK 216


>gi|62327210|ref|YP_223948.1| thymidylate synthase [Phage phiJL001]
 gi|50059528|gb|AAT69500.1| thymidylate synthase [Phage phiJL001]
          Length = 350

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 14/217 (6%)

Query: 13  KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLT-TKKVHWKSVVHELLWFLRGDSNVSY 71
           + G  R  R G    +       ++  +   L +  +  +    + E LW L G  ++++
Sbjct: 22  ESGLTRETRNGGAVVAPEPVTTVYEQPRERVLFSKLRDANPFFHLFEALWMLAGRHDLAF 81

Query: 72  LHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVS 131
           + +   ++   ++D    +   YG +WR++ D      DQ+S  V  LR  P  RR +V 
Sbjct: 82  VEKFAKNM-RSFSDDGETMWGAYGWRWRTFFD-----FDQLSWAVHRLRRLPNDRRVVVQ 135

Query: 132 AWNVALIDKMAL-----PPCHCLFQFYV-DNGKLSCQLYQRSGDVFLG-IPFNIASYSLL 184
            W   L  + A       PC+    F + D G+L   ++ RS D+  G    N+   S+L
Sbjct: 136 MWAAGLDQERADAGGKDVPCNIAIHFRINDRGQLDMTVWNRSNDIIWGAYGANVVHMSIL 195

Query: 185 TMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
              +AS +G + G +     D H Y++ F +    +S
Sbjct: 196 QEYVASAVGVEVGRYWQVSDDYHAYSDLFNKMLPLMS 232


>gi|187932666|ref|YP_001885547.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B]
 gi|187720819|gb|ACD22040.1| thymidylate synthase [Clostridium botulinum B str. Eklund 17B]
          Length = 333

 Score =  101 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 15/195 (7%)

Query: 49  KVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIY-GVQWRSWPDYDGN 107
            +     + EL+W + G+          +++W+   +K    G IY G   +    + G 
Sbjct: 59  PISIGYALAELVWIINGEEKSDI-----INMWNPSLEKYAGRGDIYHGAYGKRIRSHFG- 112

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVAL-------IDKMALPPCHCLFQFYVDNGKLS 160
             DQI    ++L+  P SR+ ++  ++  +       I +    PC+      V NGKL 
Sbjct: 113 -FDQIEKAYEALQNTPESRQVVIQIYDTKVDFPIEKGIPQDEDIPCNICSLLKVRNGKLE 171

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
                RS DV LG+P+N   ++ L  +LA  +    G + H    +HLY     +  +  
Sbjct: 172 WSQIMRSNDVLLGMPYNFIQFTGLQEILAGWLELDLGSYNHYSDSLHLYARDINKIGIGQ 231

Query: 221 SRSPRTLPQMIINPN 235
               R    + ++ N
Sbjct: 232 EVEIRNNDSLSLSRN 246


>gi|296108807|ref|YP_003615756.1| thymidylate synthase, methanogen type [Methanocaldococcus infernus
           ME]
 gi|295433621|gb|ADG12792.1| thymidylate synthase, methanogen type [Methanocaldococcus infernus
           ME]
          Length = 212

 Score =  101 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 21/212 (9%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
             Y  L++ +++ GS+     G   +      ++    K   + +   +   ++      
Sbjct: 10  KAYEILVKEILEKGSEMITEDGQRCKELLNVFVKITNPKLKSISSKYPLGKNAIESYKKQ 69

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI-DQISSIVQSLR 120
            L G  N                         Y  + R +P YD  +  DQ+S +++ L+
Sbjct: 70  LLEGSQN--------------------NFTYNYYERIREYPSYDRKLKNDQLSYVIEKLK 109

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            +  SRR ++S W   +  K+   PC     F +   KL   +  RS D+ L    N   
Sbjct: 110 NNSTSRRAVISLWQPFIDQKVKDVPCLQHIGFQLREDKLIMSVLFRSNDILLAFHSNALG 169

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
              L  ++A  +  +  E+ H + + H+Y + 
Sbjct: 170 LISLGELVAKSLEVELKEYNHFIYNAHIYIDR 201


>gi|89899864|ref|YP_522335.1| thymidylate synthase [Rhodoferax ferrireducens T118]
 gi|89344601|gb|ABD68804.1| thymidylate synthase [Rhodoferax ferrireducens T118]
          Length = 347

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 15/175 (8%)

Query: 50  VHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNV 108
           ++    + E++W L G    ++L     + W+    K  G  G  +G        + G  
Sbjct: 61  INPAFAIAEVIWILLGSDASNFL-----NFWNPVLPKYAGSGGTYHGAYGARLRTHFG-- 113

Query: 109 IDQISSIVQSLRADPYSRRHIVSAWN-VALIDKMA------LPPCHCLFQFYVDNGKLSC 161
           +DQI  + Q L A+P SR+ ++  W+    +            PC+ +    V   KL  
Sbjct: 114 LDQIERVYQILSANPESRQAVLQIWDSREDLPLSDGASRDLDIPCNLVGMLKVRAQKLEW 173

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
               RS DVFLG P N+  ++ L  ++A  +G   G F      +HLY + +++ 
Sbjct: 174 LQIMRSNDVFLGTPHNLVQFTSLQEIIAGWLGIGIGSFSLVTDSLHLYEHDYDRC 228


>gi|998793|gb|AAB34157.1| thymidylate synthase [Pneumocystis carinii]
          Length = 99

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 14/99 (14%)

Query: 93  IYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALP 144
           IYG QWR +         +Y G  +DQ+++I+Q +R  PY RR I+SAWN A ++KMALP
Sbjct: 1   IYGFQWRHFGAEYIDCKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALP 60

Query: 145 PCHCLFQFYV------DNGKLSCQLYQRSGDVFLGIPFN 177
           PCH   QFYV         +LSCQLYQRS D+ LG+PFN
Sbjct: 61  PCHMFCQFYVHIPSNNHRPELSCQLYQRSCDMGLGVPFN 99


>gi|152002544|dbj|BAF73568.1| thymidylate synthase [Onion yellows phytoplasma OY-W]
          Length = 79

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/79 (44%), Positives = 53/79 (67%)

Query: 186 MMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYE 245
           MM+A V   Q  EFIHTLGD H+Y+NH  Q   Q+ R+P+ LPQMI+NP+I ++  F++ 
Sbjct: 1   MMVAQVTNLQSYEFIHTLGDAHIYSNHLAQVQTQIQRTPKKLPQMILNPDIKNIDDFKFI 60

Query: 246 DFTLRSYEPHAAILAKVSV 264
            FTL++Y+    +   ++V
Sbjct: 61  YFTLQNYQCDGILKGDIAV 79


>gi|153840538|ref|ZP_01993205.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810]
 gi|149745801|gb|EDM56931.1| thymidylate synthase [Vibrio parahaemolyticus AQ3810]
          Length = 136

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 14/122 (11%)

Query: 1   MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
           M QYLDL + ++  G     +RTG    +     + +D++   FPL+TT+K  WK+ V E
Sbjct: 1   MKQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVANNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLRGDSNVSYLHRHGVSIWDEWAD------------KDGELGPIYGVQWRSWPDYDG 106
           LL ++RG  N     + G   WD  A+             + ++G +YGVQ R+W     
Sbjct: 61  LLGYIRGYDNAEDFRKLGTKTWDANANLNDAWLNNPYRKGEDDMGRVYGVQGRAWACQTV 120

Query: 107 NV 108
             
Sbjct: 121 GQ 122


>gi|296417085|ref|XP_002838194.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634111|emb|CAZ82385.1| unnamed protein product [Tuber melanosporum]
          Length = 95

 Score =   99 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 53/95 (55%)

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
           + L   F++ S +LLT+M+A + G + GE I  +GD H+Y++H +    Q  R P+    
Sbjct: 1   MALRFQFSMGSLALLTIMIAHMYGQEAGELIPIMGDAHVYSDHADTLKGQFERDPKEFHT 60

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           ++IN  + D+   ++E F L  Y+P  +    +SV
Sbjct: 61  LMINRQVDDIDDSKFECFELLGYDPRPSNQMNMSV 95


>gi|254490282|ref|ZP_05103471.1| hypothetical protein MDMS009_614 [Methylophaga thiooxidans DMS010]
 gi|224464415|gb|EEF80675.1| hypothetical protein MDMS009_614 [Methylophaga thiooxydans DMS010]
          Length = 82

 Score = 99.6 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFE-QADLQLSRSPRTLPQMIINPNIVDLLSF---- 242
           +A + G + G+  H + + H+Y +  E   D+QL R P   P++ INP I  L       
Sbjct: 1   MAQISGLKPGKAYHKIANAHIYEDQLELMRDVQLKREPFASPKLHINPEIKSLSDLETWV 60

Query: 243 RYEDFTLRSYEPHAAILAKVSV 264
              DF +  Y+ H  I    SV
Sbjct: 61  TLADFEVEGYQSHEPIAYPFSV 82


>gi|282599167|ref|YP_003359084.1| deoxyuridylate hydroxymethyltransferase [Deftia phage phiW-14]
 gi|257219237|gb|ACV50252.1| deoxyuridylate hydroxymethyltransferase [Deftia phage phiW-14]
          Length = 357

 Score = 99.6 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 27/226 (11%)

Query: 14  FGSDRRDRTGVGTRSTFGYQMRF---DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70
            G  +  R G  T   F   ++F   D       L  +K +   +V E  W + G  N+ 
Sbjct: 26  TGQYKECRNGGST---FLRNVKFHITDPRNRNLTLNGRKSNIFQMVAETFWVMSGSGNIK 82

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                 +    +++D        YG +  +         +Q+ S +  L  D  +RR  V
Sbjct: 83  EFLEFFLPRAPQYSDDGINWHGAYGPRMYAH--------NQLQSAIDLLIKDKDTRRAYV 134

Query: 131 SAWNVALI------------DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP-FN 177
              +  L                   PC+      +   KL  ++ QRSGD+  G    N
Sbjct: 135 MIADPTLDSAPAIEAAYGVGHSPKDVPCNREIHINIIEDKLCMKVIQRSGDMLFGTGSIN 194

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
              ++ L  +L+   G+  G++   + D H Y    +Q +  L   
Sbjct: 195 PFEFTFLQELLSEATGYALGDYQWDVTDAHYYKAFEDQVNDVLRSE 240


>gi|67922327|ref|ZP_00515839.1| Thymidylate synthase [Crocosphaera watsonii WH 8501]
 gi|67855778|gb|EAM51025.1| Thymidylate synthase [Crocosphaera watsonii WH 8501]
          Length = 502

 Score = 99.2 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 12/166 (7%)

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
            +++ +   I D+   K+G +   YG + RSW +      DQI   +  L +D  S R +
Sbjct: 254 EFINDYIGQILDDAPQKEG-VKYTYGQRLRSWFER-----DQIKQAIDKLISDKDSSRVV 307

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           +S W+V   +    PPC       + + +LS     RS D+F   P N      L   + 
Sbjct: 308 MSLWDVKDYENNDSPPCLNHIWVRIVDDELSLTATFRSNDMFSAWPANAMGLRELQQHII 367

Query: 190 SVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQ 229
             +       FQ G  I      H+Y++ +E AD  +    R + Q
Sbjct: 368 EEVNNKYQHNFQLGPLIIISQSAHIYSDCWEHADKVIETEYRRICQ 413


>gi|325959916|ref|YP_004291382.1| thymidylate synthase [Methanobacterium sp. AL-21]
 gi|325331348|gb|ADZ10410.1| thymidylate synthase, methanogen type [Methanobacterium sp. AL-21]
          Length = 205

 Score = 99.2 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 70/210 (33%), Gaps = 24/210 (11%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           L++ ++  G + +D  G  T+      +        P  T     +         F  G+
Sbjct: 17  LVKKIVSKGVEIKDERGSVTKELLNTVVNVTD----PSNTESPEGY---------FWTGE 63

Query: 67  SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126
               Y  +          DK G +          +       IDQI   V  L     SR
Sbjct: 64  KLDKYSEQF------LSGDKQGFVYTYGNRLRAHF-----GGIDQIQEAVMRLNNFKESR 112

Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           R I   W+  +  +    PC  L  F + +G+L      RS D++     N    S L  
Sbjct: 113 RAISITWDPLVDTQNDEVPCMMLVDFKIRDGELHTTGLWRSHDIYGAWFPNAVGLSNLAK 172

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
            +A   G + G         H+Y  +F++A
Sbjct: 173 YVAEETGSKLGTLTIHSISAHIYEVNFKEA 202


>gi|91773067|ref|YP_565759.1| thymidylate synthase [Methanococcoides burtonii DSM 6242]
 gi|121686818|sp|Q12X17|TYSY_METBU RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|91712082|gb|ABE52009.1| Thymidylate synthase [Methanococcoides burtonii DSM 6242]
          Length = 217

 Score = 98.8 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 4/133 (3%)

Query: 89  ELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHC 148
           +    YG + R+W       +DQI  +++ L  +  +RR     W   +  K+   PC  
Sbjct: 86  DFEYTYGQRLRNWD----GKVDQIEYVIEKLTNNKTTRRATAVTWVPTIDTKVDEVPCMI 141

Query: 149 LFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           +  F + +  +      RS D     P N+   S L   +A  +G   G         H+
Sbjct: 142 IDDFKIRDDTVHLTTLFRSHDFAGAYPANLYGLSKLLEYVADKVGLAPGTITTMSVSAHI 201

Query: 209 YNNHFEQADLQLS 221
           Y++ +++ +  + 
Sbjct: 202 YDHDWDKIEKIIK 214


>gi|154150064|ref|YP_001403682.1| thymidylate synthase [Candidatus Methanoregula boonei 6A8]
 gi|153998616|gb|ABS55039.1| thymidylate synthase [Methanoregula boonei 6A8]
          Length = 241

 Score = 98.8 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 55/124 (44%)

Query: 86  KDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPP 145
           +    G ++    R + D     +DQI  I   LR  P SRR I   WN  + +K+   P
Sbjct: 81  EYDYHGRLFDWGERLFVDGVPVHVDQIEYIATKLRQSPVSRRAIAITWNPVIDEKLNDCP 140

Query: 146 CHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           C  L Q  + +GKL  ++  RS D+      N+ +   L   +A  +G + G + H    
Sbjct: 141 CLQLVQCVLRDGKLCMRVIFRSNDMLTAAGANMYALVQLQKSIAERLGVECGTYTHISLV 200

Query: 206 VHLY 209
            H+Y
Sbjct: 201 PHIY 204


>gi|172035298|ref|YP_001801799.1| hypothetical protein cce_0382 [Cyanothece sp. ATCC 51142]
 gi|171696752|gb|ACB49733.1| hypothetical protein cce_0382 [Cyanothece sp. ATCC 51142]
          Length = 502

 Score = 98.4 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 72/180 (40%), Gaps = 17/180 (9%)

Query: 55  VVHELLWFLRGDSNVSYLHRHGVS-----IWDEWADKDGELGPIYGVQWRSWPDYDGNVI 109
           +  E L F    SN   + R  ++     I D+   K+G +   YG + RSW +      
Sbjct: 234 ITDEPLNFYFPSSNYLPIKRDFINDYIGQILDDAPQKEG-VKYTYGQRLRSWFER----- 287

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQI   +  L  D  S R ++S W+V   +    PPC       + + +LS     RS D
Sbjct: 288 DQIQQAIDKLITDKDSSRVVMSLWDVKDYENNDSPPCLNHIWVRIVDNELSLTATFRSND 347

Query: 170 VFLGIPFNIASYSLLTMMLASVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           +F   P N      L   +   I       FQ+G  I      H+Y++ +E AD  +   
Sbjct: 348 MFSAWPANAMGLRALQKHIIEQINKTSNHNFQFGPLIIISQSAHIYSDCWEHADKVIETE 407


>gi|149408287|ref|YP_001294566.1| hypothetical protein ORF058 [Pseudomonas phage M6]
          Length = 351

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 78/210 (37%), Gaps = 15/210 (7%)

Query: 14  FGSDRRDRTGVGTRSTFGYQMR---FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70
            G  R  R G      F   +       ++       +  +    + E LW L G ++V 
Sbjct: 23  EGVRRDSRNGP--VFMFPEPVTTVYLRPAERVLFWAERDANPFFHLMESLWMLGGRNDVE 80

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
           Y+ R  V     ++D        YG +WR          DQ+  I+ +L+ +   RR ++
Sbjct: 81  YVARF-VDRMRSYSDDGLTFHGAYGFRWRQHF-----FEDQLPKIIAALKENRDDRRQVL 134

Query: 131 SAWNVALI--DKMALPPCHCLFQFYVD-NGKLSCQLYQRSGDVFLG-IPFNIASYSLLTM 186
           S W+       +    PC+    F +  +G+L   +  RS D+  G    N   +S L  
Sbjct: 135 SMWDADADLGRQGKDLPCNLQAIFQIACDGRLDMTVTNRSNDLIWGAYGANAVHFSYLHE 194

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
            +A  +G + G +     + H Y     + 
Sbjct: 195 YVARSVGVEQGIYRQVSANFHAYEEVLNKV 224


>gi|13022108|gb|AAK11643.1| thymidylate synthetase [Babesia bovis]
          Length = 109

 Score = 98.0 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 22/109 (20%)

Query: 94  YGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNV---------- 135
           YG QWR +         DY G  IDQ++ I+  ++ +P  R  IV +WNV          
Sbjct: 1   YGFQWRHFGAEYLDMHADYTGKGIDQLAEIINRIKTNPNDRMLIVCSWNVSGGFLFSPFF 60

Query: 136 ----ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               A + KMALPPCHC FQFYV + KLSC ++QRS D+ LG+PFNIAS
Sbjct: 61  TIMFADLKKMALPPCHCFFQFYVSDNKLSCMMHQRSCDLGLGVPFNIAS 109


>gi|162135099|ref|YP_001595840.1| hypothetical protein [Pseudomonas phage YuA]
 gi|161513946|emb|CAO77772.1| hypothetical protein [Pseudomonas phage YuA]
          Length = 351

 Score = 97.6 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 15/210 (7%)

Query: 14  FGSDRRDRTGVGTRSTFGYQMR---FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70
            G  R  R G      F   +       ++       +  +    + E LW L G ++V 
Sbjct: 23  EGVRRDSRNGP--VFMFPEPVTTVYLRPAERVLFWAERDANPFFHLMESLWMLGGRNDVE 80

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
           Y+ R  V     ++D        YG +WR          DQ+  I+ +L+A+   RR ++
Sbjct: 81  YVARF-VDRMRSYSDDGLTFHGAYGFRWRQHF-----FEDQLPKIIAALKANRDDRRQVL 134

Query: 131 SAWNVALI--DKMALPPCHCLFQFYVD-NGKLSCQLYQRSGDVFLG-IPFNIASYSLLTM 186
           S W+       +    PC+    F +  +G+L   +  RS D+  G    N   +S L  
Sbjct: 135 SMWDADADLGRQGKDLPCNLQAIFQIACDGRLDMTVTNRSNDLIWGAYGANAVHFSYLHE 194

Query: 187 MLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
            +A  +G + G +     + H Y     + 
Sbjct: 195 YVARSVGVEQGIYRQVSANFHAYEEVLTKV 224


>gi|309790377|ref|ZP_07684942.1| thymidylate synthase [Oscillochloris trichoides DG6]
 gi|308227569|gb|EFO81232.1| thymidylate synthase [Oscillochloris trichoides DG6]
          Length = 484

 Score = 97.3 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 10/172 (5%)

Query: 91  GPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150
           G  Y    R    +DG  IDQ+++I   LR+   SRR +   WN       A PPC  L 
Sbjct: 253 GVSYTYGAR-LRTFDGQ-IDQVAAICADLRSAATSRRALAVLWNPHQDAGSANPPCLNLV 310

Query: 151 QFYVD------NGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI-GFQYGEFIHTL 203
           Q  +         +L   +Y RS D+F   P N  +   L  ++A  + G + G+     
Sbjct: 311 QARLRPAPGEATPRLFLTVYFRSHDIFRAWPANAYALRALQALIAEELGGVELGDLAILS 370

Query: 204 GDVHLYNNHFEQADLQLSRSPRTL-PQMIINPNIVDLLSFRYEDFTLRSYEP 254
              H+Y + +E A   L++  R   P++I +     ++       ++R Y P
Sbjct: 371 HSAHIYAHDWEAAAELLAQHYRPQNPRLIHDQRGAFVIVLEPPVISVRHYSP 422


>gi|310722439|ref|YP_003969263.1| dCMP hydroxymethylase [Aeromonas phage phiAS4]
 gi|306021282|gb|ADM79817.1| dCMP hydroxymethylase [Aeromonas phage phiAS4]
          Length = 227

 Score = 97.3 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 24/227 (10%)

Query: 8   LRHVI----KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           +R ++    K      D++GV T        + D    F      K++   +  EL W+L
Sbjct: 9   IRDIMVSKYKSNEFVTDKSGVKTVEIAPVMFKADEDLIFG-----KLNHDYIERELSWYL 63

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
                V+ +     +IW+  AD +G +   YG     W  +     +Q +++V+ L  +P
Sbjct: 64  SQSRYVADIPGKTPAIWEAVADCNGMINSNYG-----WAIFSEENGNQFANVVKHLIENP 118

Query: 124 YSRRHIVSAWNVALIDK-----MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           Y+RR  +     ++        M+   C    Q+ + +GKL+  ++ RS D   G   + 
Sbjct: 119 YTRRANMIYTRPSMHTDYNANGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDW 178

Query: 179 A-----SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           A        L+  + +  I  + G+       +H+Y  HF   +  +
Sbjct: 179 AWQDYVLSRLVDTLQSHEIMVEKGDIYWCADSLHVYERHFGLIEQYI 225


>gi|282599234|ref|YP_003358546.1| putative thymidylate synthase [Shigella phage phiSboM-AG3]
 gi|226973540|gb|ACO94293.1| putative thymidylate synthase [Shigella phage phiSboM-AG3]
          Length = 348

 Score = 97.3 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 24/209 (11%)

Query: 25  GTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83
           GTR   G  +   D+   +  +  +     + + E  W L G +++ +L R  +     +
Sbjct: 37  GTRFLDGVTITVSDIRDRWLSVEGRNSSAIAAIGETFWVLSGRNDIKFLSRV-LPRAANF 95

Query: 84  ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           +D        YG +  +          Q+ S++  LR +P +R+  ++ ++ AL     L
Sbjct: 96  SDDGVTWRAAYGPRLYAHG--------QLDSVINRLRKNPNTRQAYLTIYDPALDSDAGL 147

Query: 144 P-------------PCHCLFQFYVDNGKLSCQLYQRSGDVFLGIP-FNIASYSLLTMMLA 189
                          C+    F + +G+L+  +  RS DV  G+   N   +S+L  ++A
Sbjct: 148 AKFSESGEAKTKDMVCNLALLFAIVDGRLNLTVINRSQDVLWGMSSINFIEFSILQEVIA 207

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
            V+    G++     ++H YNN   Q  L
Sbjct: 208 QVLDVDVGQYKLFSNNLHYYNNEVSQKQL 236


>gi|45358942|ref|NP_988499.1| thymidylate synthase [Methanococcus maripaludis S2]
 gi|45047808|emb|CAF30935.1| Thymidylate synthase [Methanococcus maripaludis S2]
          Length = 212

 Score = 96.9 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 20/216 (9%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           L+  +++ G++     G   +      +  +      +     +  ++V       L G 
Sbjct: 16  LIPKIMEEGTEMITEDGQKCKEIMNTIIEINDPSDKSISEKYPLGERAVKSYTEQLLHGS 75

Query: 67  SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126
           +  ++++ +   I++   DK                       DQI  IV  L+    SR
Sbjct: 76  A-ATFVYDYHERIFEYPNDKKELKN------------------DQIEYIVNKLKEQINSR 116

Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           R +   WN  +   +   PC  + QF V + KL   +  RS D FL    N      L  
Sbjct: 117 RAVAITWNPYIDQSVKDVPCLQIVQFLVRDNKLYQTVLFRSNDAFLAFHANAIGLIALGE 176

Query: 187 MLASVIGFQYGEFIHTLGDVHLY-NNHFEQADLQLS 221
           M+A  +G +  ++ H    +H+Y     +     L 
Sbjct: 177 MVAEKLGIELVKYTHHSVSMHVYSERDIDNLKSFLK 212


>gi|298674842|ref|YP_003726592.1| thymidylate synthase, methanogen type [Methanohalobium evestigatum
           Z-7303]
 gi|298287830|gb|ADI73796.1| thymidylate synthase, methanogen type [Methanohalobium evestigatum
           Z-7303]
          Length = 217

 Score = 96.9 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 12/178 (6%)

Query: 44  LLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPD 103
           ++T    + K +  +  W      N   L  +   +     D        YG + R+W D
Sbjct: 49  MITIDDPYTKQIPEDFSW------NRERLDEYSKQL--ISGDNTQNFEYTYGQRLRNWND 100

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
                IDQIS ++  L     +RR     W   +  K+   PC  +  F + NGKL    
Sbjct: 101 ----EIDQISYVIDKLTESSSTRRATAVTWVPPIDTKVDEVPCMIIDDFKIRNGKLHLTT 156

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
             RS D     P N+   S L   +A   G   G+        H+Y + +++ +  + 
Sbjct: 157 LFRSHDFAGAYPANLYGLSGLLRYVAEKSGVSTGKITTISVSAHIYEHDWDKIEDIIK 214


>gi|109290020|ref|YP_656269.1| gp42 dCMP hydroxymethylase [Aeromonas phage 25]
 gi|104345693|gb|ABF72593.1| gp42 dCMP hydroxymethylase [Aeromonas phage 25]
          Length = 224

 Score = 96.9 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 24/227 (10%)

Query: 8   LRHVI----KFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           +R ++    K      D++GV T        + D    F      K++   +  EL W+L
Sbjct: 6   IRDIMVSKYKSNEFVTDKSGVKTVEIAPVMFKADEDLIFG-----KLNHDYIERELSWYL 60

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
                V+ +     +IW+  AD +G +   YG     W  +     +Q +++V+ L  +P
Sbjct: 61  SQSRYVADIPGKTPAIWEAVADCNGMINSNYG-----WAIFSEENGNQFANVVKHLIENP 115

Query: 124 YSRRHIVSAWNVALIDK-----MALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
           Y+RR  +     ++        M+   C    Q+ + +GKL+  ++ RS D   G   + 
Sbjct: 116 YTRRANMIYTRPSMHTDYNANGMSDFMCTNNVQYQIRDGKLNAVVHMRSNDAIFGYRNDW 175

Query: 179 A-----SYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           A        L+  + +  I  + G+       +H+Y  HF   +  +
Sbjct: 176 AWQDYVLSRLVDTLQSHEIMVEKGDIYWCADSLHVYKRHFGLIEQYI 222


>gi|307150936|ref|YP_003886320.1| thymidylate synthase [Cyanothece sp. PCC 7822]
 gi|306981164|gb|ADN13045.1| thymidylate synthase [Cyanothece sp. PCC 7822]
          Length = 505

 Score = 96.5 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 12/158 (7%)

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
            ++  +   I ++   ++G +   YG + RSW        DQI   ++ L A+  S R +
Sbjct: 254 KFIQDYISQILEDAPQREG-VKYTYGQRLRSWFGR-----DQIEQAIEKLAAEKDSSRVV 307

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           +S W+V   +    PPC       + + +LS     RS D+F   P N      L   + 
Sbjct: 308 MSLWDVEDYENNDSPPCLNHIWLRIVDNELSLTATFRSNDMFSAWPANAMGLRALQQHIL 367

Query: 190 SVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
             I        + G  I      H+Y++ +E A+  + 
Sbjct: 368 DNIIQKSDDSLKMGSLIIVSQSAHIYSDCWEYAERLIE 405


>gi|282899587|ref|ZP_06307551.1| hypothetical protein CRC_01035 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195466|gb|EFA70399.1| hypothetical protein CRC_01035 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 510

 Score = 96.5 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
           YL  +   + D+  D++G +   YG + RSW        DQI  ++  L  DP S R ++
Sbjct: 256 YLPEYISQVLDDAPDQEG-VKYTYGKRLRSWF-----GKDQIQQVIDKLINDPDSARAVM 309

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           S W+ A+ D+   PPC       + + +LS     RS D+F   P N      L   +  
Sbjct: 310 SLWD-AVKDEHDSPPCLNHIWVRIVDDQLSLTATFRSNDMFSAWPANGMGLRALQKYIYD 368

Query: 191 VI--------GFQYGEFIHTLGDVHLYNNHFEQAD 217
            I          Q G  I      H+Y+  +E A+
Sbjct: 369 GIVRGSDIHQNLQLGPLITVSQSAHIYDECWEHAE 403


>gi|284929672|ref|YP_003422194.1| thymidylate synthase [cyanobacterium UCYN-A]
 gi|284810116|gb|ADB95813.1| thymidylate synthase [cyanobacterium UCYN-A]
          Length = 504

 Score = 96.1 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 12/155 (7%)

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
            +++ +   I D+ + ++G +   YG + RSW        DQI  ++  L +D  S R +
Sbjct: 254 EFINDYISQILDDSSQREG-IKYTYGQRLRSWFKK-----DQIQQVIDLLVSDINSSRAV 307

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           +S W+V   D    PPC         + +LS     RS D+F   P N      L + + 
Sbjct: 308 MSLWDVNDYDNNDSPPCLNHIWIRTIDDELSLTATFRSNDMFSAWPSNAMGLRALQIHIM 367

Query: 190 SVIG------FQYGEFIHTLGDVHLYNNHFEQADL 218
             I        + G  +      H+YN+ +E AD 
Sbjct: 368 REIQNRINQKLKIGPLVTVSQSAHIYNDCWEYADK 402


>gi|294495255|ref|YP_003541748.1| thymidylate synthase [Methanohalophilus mahii DSM 5219]
 gi|292666254|gb|ADE36103.1| thymidylate synthase, methanogen type [Methanohalophilus mahii DSM
           5219]
          Length = 217

 Score = 96.1 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 23/211 (10%)

Query: 11  VIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVS 70
           +   G +  D  G   +      +  +             +   +  ++ W      N  
Sbjct: 27  IWNHGENVTDERGSKIKEFMNLMVVINDP-----------YSNEIPADISW------NQE 69

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
            L  +   +         +    YG + R+W       +DQIS ++  L+    +RR   
Sbjct: 70  RLDEYAKQL--ITGQNPQDFEYTYGQRLRNWD----ERVDQISYVIDKLKNSKTTRRATA 123

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
             W   +  ++   PC  L  F V N ++      RS D     P N+   S L   +A 
Sbjct: 124 VTWIPYIDTEVDEVPCMILDDFKVRNNQVHMTTLFRSHDFAGAYPANLYGLSQLLKYVAQ 183

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
             G+  G         H+Y + +++ +  ++
Sbjct: 184 NAGYDTGTITTISVSAHIYEHDWDRIEKIVT 214


>gi|46552|emb|CAA68823.1| thymidylate synthase [Staphylococcus aureus]
          Length = 66

 Score = 96.1 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 198 EFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAA 257
           EFIHT GD H+Y+NH +    QLSR     PQ+ IN +   +    YED  L +YE H A
Sbjct: 1   EFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTD-KSIFDINYEDLELINYESHPA 59

Query: 258 ILAKVSV 264
           I A ++V
Sbjct: 60  IKAPIAV 66


>gi|11499629|ref|NP_070871.1| thymidylate synthase, putative [Archaeoglobus fulgidus DSM 4304]
 gi|2648479|gb|AAB89199.1| thymidylate synthase, putative [Archaeoglobus fulgidus DSM 4304]
          Length = 480

 Score = 95.7 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 18/220 (8%)

Query: 8   LRHVIKFGSDRRDRTGVGTR------STFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
           L  +   G  +  RT  G        S F +++  ++ K        K+H K+   E   
Sbjct: 257 LETIYTNGKKK--RTEWGDIFEGQKESLFVHRLFLEVEKP----EENKLHDKAPFTEKY- 309

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWR-SWPDYDGNVIDQISSIVQSLR 120
              G         H   +  E      + G  Y    R  + D D   +DQ+  +++ L+
Sbjct: 310 ---GIEYAHDYIMHAAKLDGEVRRSILKEGEEYTYAERARYCDRDDVKVDQLYKVIEKLK 366

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
            D   R   V       +     PPC   +QF     +L    Y RS D +  +  N+ +
Sbjct: 367 EDSCRRDCYVGISRPWDL-LSDEPPCLRGYQFSKYGDELLGTFYMRSNDAYGAMHANMYA 425

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           ++LLT  +A + GF+   + H   D H+Y   F+     L
Sbjct: 426 FALLTKYVAELTGFKSYRYNHFALDAHIYAEFFDAVREIL 465



 Score = 49.5 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 2/100 (2%)

Query: 117 QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           + LR  P++RR  +  W       +   P       ++ + KL    + RS +       
Sbjct: 127 EKLRKSPHTRRASIPLWYPKD--HLCRNPAAITEISFIFHEKLHLTAFLRSMECLSYFEH 184

Query: 177 NIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
           N          +    G + G     +   H Y    E+A
Sbjct: 185 NFDFLVEALETICRKTGMEEGSIGMLIAVPHFYERDVERA 224


>gi|261403513|ref|YP_003247737.1| thymidylate synthase, methanogen type [Methanocaldococcus vulcanius
           M7]
 gi|261370506|gb|ACX73255.1| thymidylate synthase, methanogen type [Methanocaldococcus vulcanius
           M7]
          Length = 221

 Score = 95.7 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 68/210 (32%), Gaps = 19/210 (9%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +L+  +IK G D         R      +     K   +        K++        
Sbjct: 13  YENLVELIIKEGKDMITEDNQRCRELLNVAIEITNPKLKTISPKYPFGRKAI-------- 64

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVI-DQISSIVQSLRAD 122
                         +        + +    Y  + R +P YD  V  DQI  +++ L ++
Sbjct: 65  ----------ESYTNQLLYGYKDESDFVYNYFERIREYPSYDRKVKNDQIKYVIEKLNSN 114

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
             SRR +VS WN  +   +   PC     F      L   +  RS D+ L    N     
Sbjct: 115 STSRRAVVSLWNPFIDQDVKDVPCLQHIGFQKREKNLHMSVLFRSNDILLAFHSNALGLI 174

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            L   +A         + H + + H+Y + 
Sbjct: 175 KLGEYVAEKTNSTLKTYTHFIYNAHIYIDR 204


>gi|219850761|ref|YP_002465193.1| thymidylate synthase, methanogen type [Methanosphaerula palustris
           E1-9c]
 gi|219545020|gb|ACL15470.1| thymidylate synthase, methanogen type [Methanosphaerula palustris
           E1-9c]
          Length = 244

 Score = 95.3 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 87/223 (39%), Gaps = 17/223 (7%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW-FLRGD 66
           ++ V++ G       G  T       ++ +     P+++T     +  + +     L G 
Sbjct: 17  VKTVLEKGWVLGTEDGEATIECEELALQVENPTTEPMISTGSRFQRRFMEKYAADLLHGS 76

Query: 67  SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126
                    G+  +D         G ++    R   D     +DQI+ I++ L+  P +R
Sbjct: 77  D--------GIFEYDYH-------GRLFNWGDRLAADEAPVQVDQIAYIIRKLQEAPATR 121

Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           R +   WN  + +++   PC  L Q  + +G L  ++  RS D+      N+ +   L +
Sbjct: 122 RALAITWNPVVDEQVKDCPCLQLVQCVIRDGALQMKVVFRSNDMLTASGANMFALVHLQL 181

Query: 187 MLASVIGFQYGEFIHTLGDVHLY-NNHFEQADLQLSRSPRTLP 228
           M+A  +G + G + H     H+Y     +      +R  R  P
Sbjct: 182 MIAEALGVRIGRYTHIALVPHVYFTRDMDDLKAFCNRGERFHP 224


>gi|291092708|gb|ADD74391.1| thymidylate synthase [uncultured virus]
          Length = 96

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%)

Query: 10 HVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELLWFLRGDSN 68
           V+K G  R DRTG GTR+ FG  + FDL     PLL  +++ +KS++ ELLWFLRG+++
Sbjct: 1  KVLKRGEQRDDRTGTGTRALFGELLEFDLRGNRLPLLNCRRLSFKSILEELLWFLRGETD 60

Query: 69 VSYLHRHGVSIWDEWADKD 87
             L R GV IW E A +D
Sbjct: 61 SKILERRGVHIWTEHATRD 79


>gi|303243613|ref|ZP_07329955.1| thymidylate synthase, methanogen type [Methanothermococcus
           okinawensis IH1]
 gi|302486174|gb|EFL49096.1| thymidylate synthase, methanogen type [Methanothermococcus
           okinawensis IH1]
          Length = 223

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 68/214 (31%), Gaps = 26/214 (12%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y  L+  ++K G D     G   R      +     K   +     +  K+V        
Sbjct: 14  YEYLVEKILKDGEDMITEDGQRCRELRNTVIEITNPKLKSISPKYPLGKKAV-------- 65

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
              +N        +  +D                       + N I+QI  I+  L+  P
Sbjct: 66  EQYTNNLLYGSKNIFSYDYHERLF-------------KYPVNNNEINQIEYIIDKLKEQP 112

Query: 124 YSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
            SRR +   W   +            PC    QF + + KL   +  RS D+ +    N 
Sbjct: 113 NSRRCVAITWQPDIDIEVSKKDYGSVPCLQFVQFLIRDNKLHQTVLFRSNDLMVAFVSNA 172

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                L   +A  +G  YG + H    +H+Y + 
Sbjct: 173 LGLIALGEKVAEEVGVDYGTYTHHSVSMHIYIDR 206


>gi|332879334|ref|ZP_08447031.1| hypothetical protein HMPREF9074_02783 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332682754|gb|EGJ55654.1| hypothetical protein HMPREF9074_02783 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 177

 Score = 94.6 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 19/183 (10%)

Query: 38  LSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQ 97
            +    +  +  +  K +  EL  F++G+ +V      G++ WD                
Sbjct: 2   PADLLDIFESHGIARKKLKTELGLFMQGERDVERYREAGITWWDY----------CGQTL 51

Query: 98  WRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
             S+P Y   +   I+ I +  R    S+ +++      +    A  PC  L QF +D G
Sbjct: 52  VNSYPTYFEKLPPLIAQINEEKRN---SKNYVLFLGATGVETNQA--PCLSLVQFQIDEG 106

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQAD 217
           +L    YQRS D  LG+P +I    L    ++  I          LG+VH+Y N+  +  
Sbjct: 107 ELVVSAYQRSSDANLGLPSDIYHLYL----MSRQIDLPLKSITLDLGNVHIYENNISRTK 162

Query: 218 LQL 220
             L
Sbjct: 163 DLL 165


>gi|322805078|emb|CBZ02638.1| thymidylate synthase [Clostridium botulinum H04402 065]
          Length = 196

 Score = 94.2 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 6/190 (3%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWF 62
           Y+  L  V           G  ++    Y M   +  +      ++K +      E LW+
Sbjct: 10  YIKNLNDVYYNPEFINQPRGNVSKERLNYFMILENPRERICYTKSRKTNIIFNFAEALWY 69

Query: 63  LRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
           L G +++ Y+  +  ++     D     G  YG +  S+     N I+Q + I++  + D
Sbjct: 70  LSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPKIFSYG---YNKINQWNRIIKLFKED 126

Query: 123 PYSRRHIVSAW--NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           P ++R  +  +  N  L  K     C   FQF++   KL    + R+ D + GI  ++ S
Sbjct: 127 PDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREHKLYMTTFMRANDAYRGIISDVFS 186

Query: 181 YSLLTMMLAS 190
           ++ +    ++
Sbjct: 187 FTFIQEFFSN 196


>gi|12055931|emb|CAC20646.1| putative thymidylate synthase [Lactobacillus sakei]
          Length = 70

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/66 (62%), Positives = 50/66 (75%)

Query: 21 RTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIW 80
          RT  GT S FGYQMRF+L +GFPLLTTKK+ +  +  ELLWFL+GDSN+ YL +H   IW
Sbjct: 1  RTNTGTYSLFGYQMRFNLQEGFPLLTTKKMPFGLIKSELLWFLKGDSNIRYLLQHNNHIW 60

Query: 81 DEWADK 86
          DEWA +
Sbjct: 61 DEWAFE 66


>gi|311993033|ref|YP_004009899.1| gp42 dCMP hydroxymethylase [Enterobacteria phage CC31]
 gi|284177871|gb|ADB81537.1| gp42 dCMP hydroxymethylase [Enterobacteria phage CC31]
          Length = 245

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 75/209 (35%), Gaps = 21/209 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TG  T    G          F  +  + V       EL W+      V  +     +I
Sbjct: 27  DKTGAKTIELIGPSFVVTEDSIFGTVNQEYVE-----RELAWYKSKSLFVKDIPGGTPAI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVA--- 136
           W++ +   GE+   YG     W  +     +Q S     L   P SRR I+     +   
Sbjct: 82  WEQVSSSKGEINSNYG-----WAIWSAENYNQFSFCATELIEKPDSRRAIMIYTRPSMQV 136

Query: 137 --LIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG- 193
               D M+   C    Q+ + +G+++  +  RS DV  G   + A    +   L   +  
Sbjct: 137 DFERDGMSDFMCTNTVQYLIRDGRVNAIVNMRSNDVVFGFRNDYAWQKYVLESLVETVNA 196

Query: 194 -----FQYGEFIHTLGDVHLYNNHFEQAD 217
                +  G+ I   G +H+Y  HF   D
Sbjct: 197 GSGEKYVPGDIIWNAGSLHVYERHFYLVD 225


>gi|150399440|ref|YP_001323207.1| thymidylate synthase [Methanococcus vannielii SB]
 gi|150012143|gb|ABR54595.1| thymidylate synthase [Methanococcus vannielii SB]
          Length = 212

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 3/142 (2%)

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWP---DYDGNVIDQISSIVQSLRADPYSRR 127
            L    V  + E          +Y    R +    D      DQI  IV  L+++  SRR
Sbjct: 58  PLGERAVKSYTEQLINGCTATFVYDYHERIFKYPNDLKNRKFDQIEYIVNKLKSEKNSRR 117

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            +   WN  +  ++   PC    QF + + KL   +  RS D FL    N      L  +
Sbjct: 118 AVSITWNPYIDTEVKDVPCLQFVQFLIRDNKLYQTVLFRSNDAFLAFHANAIGLISLGEL 177

Query: 188 LASVIGFQYGEFIHTLGDVHLY 209
           +A  +G +   + H    +H+Y
Sbjct: 178 IAEKLGIELVRYTHHSVSMHVY 199


>gi|326804560|ref|YP_004327431.1| Thymidylate synthase [Salmonella phage Vi01]
 gi|301795210|emb|CBW37928.1| Thymidylate synthase [Salmonella phage Vi01]
          Length = 346

 Score = 93.8 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 24/209 (11%)

Query: 25  GTRSTFGYQMRF-DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEW 83
           GTR   G  +   D    +  +  +     + + E  W L G +++ +L +  +     +
Sbjct: 37  GTRFIDGVTITVSDPRDRWLSVEGRNSSAIAAIGETFWVLSGRNDIRFLSKV-LPRAANF 95

Query: 84  ADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           +D        YG +  +          Q+ S++  LR +P +R+  ++ ++ AL     L
Sbjct: 96  SDDGVTWRGAYGPRLYNNG--------QLDSVISRLRNNPNTRQAYLTIYDPALDSDEGL 147

Query: 144 PP-------------CHCLFQFYVDNGKLSCQLYQRSGDVFLGIP-FNIASYSLLTMMLA 189
                          C+    F +  G+L+  +  RS DV  G+   N   +S+L  +LA
Sbjct: 148 AAHSETGEAKTKDMICNLALLFSITEGRLNITVINRSQDVLWGMSSINFIEFSILQEVLA 207

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
            V+  + G +     ++H YNN   +  L
Sbjct: 208 KVLNVEVGYYKLFSNNLHYYNNEVSRKQL 236


>gi|150401473|ref|YP_001325239.1| thymidylate synthase [Methanococcus aeolicus Nankai-3]
 gi|150014176|gb|ABR56627.1| thymidylate synthase [Methanococcus aeolicus Nankai-3]
          Length = 222

 Score = 93.8 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 71/214 (33%), Gaps = 26/214 (12%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           Y +L++ V+K G D     G   R      +     K   +     +  K+V        
Sbjct: 13  YEELVKEVLKNGEDMITEDGQKCREIRNTVIEITNPKLKSISPKYPLGKKAV-------- 64

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP 123
              +N        V  +D  +                    +   I+QI  IV+ L+   
Sbjct: 65  EQYTNNLLYGSENVFSYDYHSRLF-------------KYPVNNKEINQIDFIVEKLKEQQ 111

Query: 124 YSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNI 178
            SRR +   W   +            PC    QF + + KL   +  RS D+ +    N 
Sbjct: 112 NSRRCVAITWQPNIDIEVSNKDHGSVPCLQFVQFLIRDNKLYQTVLFRSNDLAVAFVSNA 171

Query: 179 ASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                L  M+A  +G  YG + H    +H+Y + 
Sbjct: 172 LGLIALGEMVAEKVGVDYGTYTHHSVSMHIYIDR 205


>gi|218437721|ref|YP_002376050.1| thymidylate synthase [Cyanothece sp. PCC 7424]
 gi|218170449|gb|ACK69182.1| thymidylate synthase [Cyanothece sp. PCC 7424]
          Length = 512

 Score = 93.8 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 12/157 (7%)

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
             L  +   +  + + ++G +   YG + RSW        DQI  +++ L  D  S R +
Sbjct: 254 QNLQNYIEQMLSDLSSQEG-VEYTYGKRLRSWFKQ-----DQIEQVIKKLTLDINSSRAV 307

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           +S W+V   +    PPC       V   +LS     RS D+F   P N      L   + 
Sbjct: 308 MSLWDVHDHEGNDNPPCLNHIWLRVVENELSLTATFRSNDMFSAWPANAMGLRALQQHIL 367

Query: 190 SVIG------FQYGEFIHTLGDVHLYNNHFEQADLQL 220
             I        + G  I      H+Y++ +E AD  +
Sbjct: 368 DNINQRASYSLKMGPLITVSQSAHIYSDCWEYADRLI 404


>gi|159905677|ref|YP_001549339.1| thymidylate synthase [Methanococcus maripaludis C6]
 gi|159887170|gb|ABX02107.1| thymidylate synthase, methanogen type [Methanococcus maripaludis
           C6]
          Length = 210

 Score = 93.8 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 76/204 (37%), Gaps = 19/204 (9%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           L+  +++ G++     G   +      +         +    ++  ++V       L G 
Sbjct: 16  LIPKIMEEGTEMVTEDGQKCKEIMNTLIEITDPSDKSISEKYQLGERAVKSYTEQLLYGS 75

Query: 67  SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126
           +  ++++ +   I++   DK                       DQI  IV  L+    SR
Sbjct: 76  A-ATFVYDYHERIFEYPNDKKELKN------------------DQIEYIVNKLKEQINSR 116

Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           R +   WN  +   +   PC  + QF V + KL   +  RS D FL    N      L  
Sbjct: 117 RAVAITWNPYIDQTVKDVPCLQIVQFLVRDNKLYQTVLFRSNDAFLAFHANAIGLIALGE 176

Query: 187 MLASVIGFQYGEFIHTLGDVHLYN 210
           M+A  +G +  ++ H    +H+Y+
Sbjct: 177 MVAEKLGIELVKYTHHSVSMHVYS 200


>gi|257059146|ref|YP_003137034.1| thymidylate synthase [Cyanothece sp. PCC 8802]
 gi|256589312|gb|ACV00199.1| thymidylate synthase [Cyanothece sp. PCC 8802]
          Length = 508

 Score = 93.4 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 12/183 (6%)

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
            ++  +   I D+   ++G +   YG + RSW        DQI   +Q L  +  S R +
Sbjct: 254 KFIEDYISQILDDAPQQEG-VKYTYGQRLRSWFGR-----DQIEQAIQKLVIEKDSSRVV 307

Query: 130 VSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
           +S W+V   D    PPC       + N +LS     RS D+F     N      L   + 
Sbjct: 308 MSLWDVRDYDNNDSPPCLNHIWLRIVNDELSLTATFRSNDMFSAWVANAMGLRALQQHIL 367

Query: 190 SVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFR 243
             I        + G  I      H+Y++ +E AD  +      L Q     +       R
Sbjct: 368 DNIVSKADYNLKMGPLITVSQSAHIYSDCWEHADRLIQTEYVKLCQQRDYTDPSGSFLIR 427

Query: 244 YED 246
            +D
Sbjct: 428 LDD 430


>gi|222873482|gb|EEF10613.1| predicted protein [Populus trichocarpa]
          Length = 57

 Score = 93.4 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/57 (64%), Positives = 49/57 (85%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVH 57
          M QYLD +RHV + G+++ DRTG GTRS FGYQMRFDL++GFP++TTKK+H KS++H
Sbjct: 1  MKQYLDFMRHVYEHGTEKSDRTGTGTRSVFGYQMRFDLNEGFPVVTTKKLHLKSIIH 57


>gi|32034581|ref|ZP_00134737.1| COG0207: Thymidylate synthase [Actinobacillus pleuropneumoniae
          serovar 1 str. 4074]
          Length = 133

 Score = 93.0 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 1  MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVHE 58
          M QYLDL   ++  G     +RTG    +     + ++++ G FPL+TT++  WK+ + E
Sbjct: 1  MKQYLDLCHRIVNEGKWVENERTGKRCLTVINADLTYNVATGEFPLVTTRRSFWKAAIAE 60

Query: 59 LLWFLRGDSNVSYLHRHGVSIWDEWADKD 87
          LL ++RG  N +   + G   WD  A+++
Sbjct: 61 LLGYIRGYDNAADFRKLGTKSWDANANQN 89


>gi|323941565|gb|EGB37746.1| thymidylate synthase [Escherichia coli E482]
          Length = 52

 Score = 92.6 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 32/52 (61%)

Query: 213 FEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
            +Q  LQLSR PR LP++II      +  +R+EDF +  Y+PH  I A V++
Sbjct: 1   MDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI 52


>gi|115299500|gb|ABI93720.1| dihydrofolate reductase-thymidylate synthase [Paramecium
           primaurelia]
          Length = 93

 Score = 92.3 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 8/93 (8%)

Query: 92  PIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMAL 143
           P+YG QWR +         DY     DQ+  I+QSL+ +P SRR I+SA N     +M+L
Sbjct: 1   PVYGFQWRHFGAKYKDCQTDYSNQGADQVKGIIQSLKNNPDSRRIILSARNPIDFKQMSL 60

Query: 144 PPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPF 176
           PPCH + QF+V NGKL    YQRS D  LGIPF
Sbjct: 61  PPCHVMSQFFVANGKLIRMTYQRSCDFGLGIPF 93


>gi|327314456|ref|YP_004329893.1| thymidylate synthase [Prevotella denticola F0289]
 gi|326946285|gb|AEA22170.1| thymidylate synthase [Prevotella denticola F0289]
          Length = 332

 Score = 92.3 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 92/231 (39%), Gaps = 27/231 (11%)

Query: 6   DLLRHVIKFGSDRRDRTGVGTRSTFGYQMR--FDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           D  R ++K G  R  R  +         M    D +     +  ++ +      E LW  
Sbjct: 15  DTCRLILKEGVCRETRQ-LKCYELPEPYMVKLTDPTARMITIAERQWYAPLAYAESLWIA 73

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG------------NVIDQ 111
            G ++++Y++ +G ++  +++D    +   YG + R +   +             N +DQ
Sbjct: 74  TGRNDMNYINLYGRNL-KKFSDNGETMRGAYGPRLRHYNGDECDYNIHEIYDELPNEVDQ 132

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVAL--------IDKMALPPCHCLFQFYVDNG--KLSC 161
              ++   + D  +R+ +++  +           +      PC  +  F  D    KL+ 
Sbjct: 133 FRYVIDCFKKDINTRQAVINIGDPVKDCFGIDRNLKVTKDIPCTRMLHFMKDANANKLNL 192

Query: 162 QLYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
            +  RS D+  G    NI +++ +    A+++G + G + H   ++H Y +
Sbjct: 193 IVSMRSNDLIWGASAVNIFNFTWMQEYFAAILGMEIGSYYHIADNLHYYED 243


>gi|9632636|ref|NP_049659.1| gp42 dCMP hydroxymethylase [Enterobacteria phage T4]
 gi|118788|sp|P08773|DCHM_BPT4 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase;
           Short=Deoxycytidylate hydroxymethylase; AltName:
           Full=dCMP hydroxymethylase; Short=dCMP HMase
 gi|4389322|pdb|1B5D|A Chain A, Dcmp Hydroxymethylase From T4 (Intact)
 gi|4389324|pdb|1B5E|A Chain A, Dcmp Hydroxymethylase From T4
 gi|4389360|pdb|1B49|A Chain A, Dcmp Hydroxymethylase From T4 (Phosphate-Bound)
 gi|4389361|pdb|1B49|C Chain C, Dcmp Hydroxymethylase From T4 (Phosphate-Bound)
 gi|6729700|pdb|1B5D|B Chain B, Dcmp Hydroxymethylase From T4 (Intact)
 gi|6729701|pdb|1B5E|B Chain B, Dcmp Hydroxymethylase From T4
 gi|5354260|gb|AAD42467.1|AF158101_54 gp42 dCMP hydroxymethylase [Enterobacteria phage T4]
 gi|15312|emb|CAA68342.1| unnamed protein product [Enterobacteria phage T4]
 gi|215843|gb|AAA21709.1| deoxycytidylate hydroxymethylase [Enterobacteria phage T4]
 gi|299780399|gb|ADJ39761.1| dCMP hydroxymethylase [Enterobacteria phage T4T]
          Length = 246

 Score = 91.9 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  +      +  EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG     W  +  +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +L  +++ +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|169836331|ref|ZP_02869519.1| thymidylate synthase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 78

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/78 (56%), Positives = 51/78 (65%)

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            IV AWN        LPPCH  F F V   KL+C L QRSGD+ LGIPFN+A YSLLTMM
Sbjct: 1   MIVLAWNPGNATISKLPPCHYTFAFNVLGNKLNCHLTQRSGDIALGIPFNLACYSLLTMM 60

Query: 188 LASVIGFQYGEFIHTLGD 205
           +A   G++ GEF HT+ D
Sbjct: 61  IAKECGYEAGEFAHTIID 78


>gi|118789|sp|P18030|DCHM_BPT6 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase;
           Short=Deoxycytidylate hydroxymethylase; AltName:
           Full=dCMP hydroxymethylase; Short=dCMP HMase
          Length = 246

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  +      +  EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG     W  +  +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +L  +++ +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDPTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|118787|sp|P18029|DCHM_BPT2 RecName: Full=Deoxycytidylate 5-hydroxymethyltransferase;
           Short=Deoxycytidylate hydroxymethylase; AltName:
           Full=dCMP hydroxymethylase
          Length = 246

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  +      +  EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG     W  +  +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +L  +++ +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|134045244|ref|YP_001096730.1| thymidylate synthase [Methanococcus maripaludis C5]
 gi|132662869|gb|ABO34515.1| Thymidylate synthase [Methanococcus maripaludis C5]
          Length = 210

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 75/204 (36%), Gaps = 19/204 (9%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           L+  +++ G++     G   +      +         +     +  ++V       L G 
Sbjct: 16  LIPKIMEEGTEMVSEDGQKCKELMNTIIEITDPSDKSISEKYPLGERAVESYTEQLLHGS 75

Query: 67  SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126
           +  ++++ +   I++  +DK                       DQI  IV  L+    SR
Sbjct: 76  A-ATFVYDYHERIFEYPSDKKELKN------------------DQIDYIVNKLKEQINSR 116

Query: 127 RHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM 186
           R I   WN  +   +   PC  + QF + + KL   +  RS D FL    N      L  
Sbjct: 117 RAIAITWNPYIDQTVKDVPCLQIVQFLIRDNKLYQTVLFRSNDAFLAFHANAIGLIALGE 176

Query: 187 MLASVIGFQYGEFIHTLGDVHLYN 210
           M+A  +  +  ++ H    +H+Y+
Sbjct: 177 MVAEKLEIELAKYTHHSVSMHVYS 200


>gi|297619495|ref|YP_003707600.1| thymidylate synthase, methanogen type [Methanococcus voltae A3]
 gi|297378472|gb|ADI36627.1| thymidylate synthase, methanogen type [Methanococcus voltae A3]
          Length = 213

 Score = 91.1 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 66/179 (36%), Gaps = 7/179 (3%)

Query: 38  LSKGFPLLTTKKVHWKSVVHELLWFL---RGDSNVSY-LHRHGVSIWDEWADKDGELGPI 93
           LS+G  + T      K +++ ++       GD +  Y L  + +  +            +
Sbjct: 21  LSEGIDMTTEDGQKCKEIMNTVIEITDPSNGDVSSKYPLGENAIKSYTNQLVNGCNTEFV 80

Query: 94  YGVQWRSWP---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLF 150
           Y    R +           DQI  IV  L  +  SRR I   WN  +  ++   PC    
Sbjct: 81  YDYHERIFEYPNQDKTEKFDQIDYIVGKLSENHSSRRAIAITWNPYIDTQVKDVPCLQFI 140

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           +F V N +L   +  RS D +L    N      L   +A  +     ++ H    +H+Y
Sbjct: 141 EFLVRNDELYMTVLFRSNDAYLAFHANALGLIALGQTVAEKLNIPLKKYTHHSVSMHVY 199


>gi|228860976|ref|YP_002853999.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB51]
 gi|227438650|gb|ACP30962.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB51]
          Length = 246

 Score = 91.1 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  +      +  EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG     W  +  +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +L  +++ +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSSRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|291290258|dbj|BAI83053.1| dCMP hydroxymethylase [Enterobacteria phage AR1]
          Length = 246

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  +      +  EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG     W  +  +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +L  +++ +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|228861357|ref|YP_002854378.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB14]
 gi|227438373|gb|ACP30686.1| gp42 dCMP hydroxymethylase [Enterobacteria phage RB14]
          Length = 246

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  +      +  EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG     W  +  +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +L  +++ +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKVNAVVSMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|126178499|ref|YP_001046464.1| thymidylate synthase [Methanoculleus marisnigri JR1]
 gi|125861293|gb|ABN56482.1| thymidylate synthase [Methanoculleus marisnigri JR1]
          Length = 241

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 46/102 (45%)

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +DQI  I + L     SRR +   WN  + + +   PC  L Q  + NGKL  ++  RS
Sbjct: 103 HVDQIDYIARKLEQAANSRRAVAVTWNPVVDENLDDCPCLQLVQCLLRNGKLQMKVVFRS 162

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
            D+      N+ +   L  M+A  +G   G + H     H+Y
Sbjct: 163 NDILSAAGSNMYALVRLQKMIADRLGVPCGRYTHIALVPHIY 204


>gi|116326264|ref|YP_802984.1| dCMP hydroxymethylase [Enterobacteria phage RB32]
 gi|115343857|gb|ABI94866.1| dCMP hydroxymethylase [Enterobacteria phage RB32]
          Length = 246

 Score = 90.3 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  +      +  EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSQSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG     W  +  +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +L  +++ +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|330858570|ref|YP_004414945.1| putative dCMP hydroxymethylase [Shigella phage Shfl2]
 gi|327397504|gb|AEA73006.1| putative dCMP hydroxymethylase [Shigella phage Shfl2]
          Length = 246

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 22/210 (10%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  +      +  EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSQSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG     W  +  +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA-SYSLLTMMLASVI- 192
               D M+   C    Q+ + + K++  +  RS DV  G   + A    +L  +++ +  
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNA 196

Query: 193 -----GFQYGEFIHTLGDVHLYNNHFEQAD 217
                 ++ G  I  +G +H+Y+ HF   D
Sbjct: 197 GDSTRQYKAGSIIWNVGSLHVYSRHFYLVD 226


>gi|288931042|ref|YP_003435102.1| thymidylate synthase [Ferroglobus placidus DSM 10642]
 gi|288893290|gb|ADC64827.1| thymidylate synthase [Ferroglobus placidus DSM 10642]
          Length = 424

 Score = 89.9 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 91  GPIYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           G  Y    R  + + D   +DQ+   ++ LR +PY R   V    V  +     PPC   
Sbjct: 285 GEEYTYAERARYCERDEKKVDQLYECIKKLRENPYRRDCYVGISRVWDL-TSDDPPCLRG 343

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
           +QF +   K     Y RS D++  +  N+ ++SLLT  ++ +I  +  ++ H   D H+Y
Sbjct: 344 YQF-LKTRKFMGIFYMRSNDIYGAMHANMYAFSLLTDYVSQLINEREYKYYHFSVDAHIY 402

Query: 210 NNHFEQADLQLS 221
               +     L 
Sbjct: 403 EEFLDSVKEILE 414



 Score = 56.0 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 5/122 (4%)

Query: 101 WPDYDGNVIDQISSIV----QSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN 156
           W   + + +D++ +++    + L+  PY+RR  +  W          PP      F    
Sbjct: 57  WKACEDSYLDRVENLIQTAAEKLKKTPYTRRVSLPVWRPED-HLCKTPPTVTEISFLYYF 115

Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
             L    Y RS D       N      +   +A     + G     +   H+Y     + 
Sbjct: 116 DSLHATAYVRSLDALNYFSANFDFVLHVLEEIARKAEMEIGSVALLVAAPHIYKRDTNRV 175

Query: 217 DL 218
           + 
Sbjct: 176 EK 177


>gi|150402548|ref|YP_001329842.1| thymidylate synthase [Methanococcus maripaludis C7]
 gi|150033578|gb|ABR65691.1| thymidylate synthase [Methanococcus maripaludis C7]
          Length = 210

 Score = 89.6 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 3/141 (2%)

Query: 72  LHRHGVSIWDEWADKDGELGPIYGVQWRSWP---DYDGNVIDQISSIVQSLRADPYSRRH 128
           L    V  + E          +Y    R +    D      DQI  IV  L+    SRR 
Sbjct: 59  LGERAVKSYTEQLLHGSAATFVYDYHERIFEYPNDKKELKNDQIEYIVYKLKEQINSRRA 118

Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
           +   WN  +   +   PC  + QF + + KL   +  RS D FL    N      L  ++
Sbjct: 119 VAITWNPYIDQTVKDVPCLQIVQFLIRDNKLYQTVLFRSNDAFLAFHANAIGLIALGELV 178

Query: 189 ASVIGFQYGEFIHTLGDVHLY 209
           A  +G +  ++ H    +H+Y
Sbjct: 179 AEKLGIELVKYTHHSVSMHVY 199


>gi|254410174|ref|ZP_05023954.1| thymidylate synthase, putative [Microcoleus chthonoplastes PCC
           7420]
 gi|196183210|gb|EDX78194.1| thymidylate synthase, putative [Microcoleus chthonoplastes PCC
           7420]
          Length = 421

 Score = 89.2 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 14/166 (8%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           + +++  +   I D+   ++G +   YG + RSW        DQI  I+  L  +  +  
Sbjct: 176 DRAFIQEYIHQILDDAPYREG-VKYTYGQRLRSWF-----GKDQIEQIITKLIGEIDAAS 229

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            ++S W+V    +    PC       V + +LS     RS D+++  P N      L   
Sbjct: 230 AVMSLWDVKD-HEQGGSPCLNHLWARVVDHELSLTATLRSNDMYMAWPSNAMGLRALQQY 288

Query: 188 LASVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTL 227
           +   I        + G  I      H+Y++ +E AD QL R     
Sbjct: 289 IRDEIAQRSSYDLRMGPLITISQSAHIYDDTWENAD-QLIRKQYPA 333


>gi|282898249|ref|ZP_06306240.1| Thymidylate synthase, putative [Raphidiopsis brookii D9]
 gi|281196780|gb|EFA71685.1| Thymidylate synthase, putative [Raphidiopsis brookii D9]
          Length = 513

 Score = 89.2 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 63/164 (38%), Gaps = 21/164 (12%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           + SYL  +   + D+  +++G +   YG + RSW        DQI  ++  L  D  S R
Sbjct: 253 DRSYLPEYISQVLDDAPEQEG-VKYTYGKRLRSWF-----GKDQIQQVIDKLTNDFDSAR 306

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            ++S W+    D    PPC       + + +LS     RS D+F   P N      L   
Sbjct: 307 AVMSLWDPEQ-DHHDSPPCLNHIWVRIMDNQLSLTATFRSNDMFSAWPANAMGLRALQKY 365

Query: 188 LASVIG--------------FQYGEFIHTLGDVHLYNNHFEQAD 217
           +   +                Q G  I      H+Y+  +E A+
Sbjct: 366 IYDRVHNGVDNKTNQDFFGQLQLGPLITISQSAHIYDECWESAE 409


>gi|256810378|ref|YP_003127747.1| thymidylate synthase, methanogen type [Methanocaldococcus fervens
           AG86]
 gi|256793578|gb|ACV24247.1| thymidylate synthase, methanogen type [Methanocaldococcus fervens
           AG86]
          Length = 222

 Score = 89.2 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 70/215 (32%), Gaps = 28/215 (13%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFL 63
           + +L+  ++  G       G  T+      +     K       KKV  K  + E     
Sbjct: 13  FEELIPKILTEGDLVETEFGERTKEIRNTIIEITNPK------LKKVPEKYPLGE----- 61

Query: 64  RGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWP-DYDGNVIDQISSIVQSLRAD 122
                   +  +  ++     +        Y    R +   Y+   I+QI  I++ L   
Sbjct: 62  ------KAVEEYRKNLLYGSKNIF-----SYDYHERLFEYPYNEERINQIDYIIEKLNQQ 110

Query: 123 PYSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
             SRR I   WN  +      D+    PC    +F V +  L   +  RS D  L    N
Sbjct: 111 KNSRRAIAITWNPKIDIEVSKDERGSVPCLQFIEFLVRDNNLHMTVVFRSNDALLAYVAN 170

Query: 178 IASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
                 L   +A     Q   ++H    +H+Y + 
Sbjct: 171 ALGLISLGEYIAEKTNTQLKSYVHHSVSMHVYIDR 205


>gi|166366992|ref|YP_001659265.1| thymidylate synthase [Microcystis aeruginosa NIES-843]
 gi|166089365|dbj|BAG04073.1| thymidylate synthase [Microcystis aeruginosa NIES-843]
          Length = 497

 Score = 88.4 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 13/159 (8%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           + ++L  +   I D+     G +   YG + RSW        DQI+ ++  L ++  +  
Sbjct: 253 DRAFLTEYIGQILDDSPIHQG-VKYTYGQRLRSWFGR-----DQIAQVINKLISEIDAAS 306

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            ++S W+V   +K    PC       V   +LS     RS D+F   P N      L   
Sbjct: 307 AVMSLWDVKDHEKGGS-PCLNHIWVRVVENELSLTAIFRSNDMFAAWPANAMGLRALQQH 365

Query: 188 LASVI------GFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           +   I          G  I      H+Y++ +E  +  +
Sbjct: 366 ICQEINQRSQYNLTLGPLITISQSAHIYDDTWENVERLI 404


>gi|84490025|ref|YP_448257.1| thymidylate synthase [Methanosphaera stadtmanae DSM 3091]
 gi|84373344|gb|ABC57614.1| ThyA [Methanosphaera stadtmanae DSM 3091]
          Length = 209

 Score = 88.4 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 71/215 (33%), Gaps = 24/215 (11%)

Query: 8   LRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDS 67
           ++ +++ G +  D  G  T+      +         +      H   +          ++
Sbjct: 18  VKKIMQEGHEVTDERGSLTKELQNVILEITNPNDNTIPECSPWHDDRL----------ET 67

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
               L            D +      YG + R +       IDQI + ++ L   P SRR
Sbjct: 68  YKKELLD---------PDNEQGFVYTYGNRLRQYFK-----IDQIDTCIEKLNNCPQSRR 113

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            I    +    +K+   PC     F + + +L    + RS D       N+     +   
Sbjct: 114 AIAITIDPIQDNKVDEIPCLQEIAFLIRDNQLYMTDFFRSNDCGGATFPNLFGIREVGYY 173

Query: 188 LASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           +A     +    +H    +H+Y + +++    L +
Sbjct: 174 VAKNTDTELVNMVHHAMSLHIYEHDWDKCREILRK 208


>gi|32453532|ref|NP_861738.1| RB69ORF048c hypothetical protein [Enterobacteria phage RB69]
 gi|32350351|gb|AAP75950.1| RB69ORF048c hypothetical protein [Enterobacteria phage RB69]
          Length = 238

 Score = 88.0 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 76/220 (34%), Gaps = 14/220 (6%)

Query: 9   RHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW--FLRGD 66
           R +++      D             +  D    F +   +         E  W   + G 
Sbjct: 24  REILENPEFVTDSRIGRCNEIGSMTVVVDTPSSFKMTDPRINRISYEYAEDFWKFMISGG 83

Query: 67  SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVID-QISSIVQSLRADPYS 125
           ++     +   ++    +    +  P        +  + G  I  Q+ ++++ L+  P S
Sbjct: 84  TDAEEAFKAYPNVAKFISKPKSDALPAN------FNTFYGPRIAAQLPALLKELKEKPNS 137

Query: 126 RRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
           RR +      +       D+    PC     +Y+ +GKL    + RS +  + +  +   
Sbjct: 138 RRVVFQILESSDQALLDSDETLEYPCTDSVTYYIRDGKLYTHCHMRSQNCAVVMQLDFYL 197

Query: 181 YSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
              L   +A+  G + G++ HT+   H++   F+     L
Sbjct: 198 QGKLLHYIANECGVEVGDYTHTMVSAHVFERDFDYVKGFL 237


>gi|218246096|ref|YP_002371467.1| thymidylate synthase [Cyanothece sp. PCC 8801]
 gi|218166574|gb|ACK65311.1| thymidylate synthase [Cyanothece sp. PCC 8801]
          Length = 497

 Score = 87.2 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 13/160 (8%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           + S+L  +   I D+    +G +   YG + RSW        DQI  ++  L  +  +  
Sbjct: 253 DRSFLQEYIPQILDDAPYTEG-VKYTYGQRLRSWFKR-----DQIEQVINKLIGEIDAAS 306

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            ++S W+V   DK    PC       V + +LS     RS D+F   P N      L   
Sbjct: 307 GVMSLWDVNDHDKGGS-PCLNHIWVRVVDNELSLTATLRSNDMFAAWPANAMGLRALQQH 365

Query: 188 LASVI------GFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           +   I        Q G  I      H+Y++ +E  D  +S
Sbjct: 366 IRDAIAKRSDYNLQMGPLITISQSAHIYDDTWENVDKLIS 405


>gi|15668688|ref|NP_247487.1| thymidylate synthase [Methanocaldococcus jannaschii DSM 2661]
 gi|3219867|sp|Q57931|TYSY_METJA RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|1591214|gb|AAB98502.1| thymidylate synthase (thyA) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 222

 Score = 86.5 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSC 161
             I+QI  I++ L     SRR +   WN  +      D+    PC  L QF + NGKL  
Sbjct: 95  EKINQIDYIIEKLNQQKNSRRAVAITWNPKIDIEVSRDERGSVPCLQLVQFLIRNGKLYQ 154

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            +  RS D  L    N      L   +A  +G  YG + H    +H+Y + 
Sbjct: 155 TVIFRSNDALLAFVSNAIGLITLGEYIAKKVGVGYGTYTHHAISMHIYVDR 205


>gi|296417111|ref|XP_002838207.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634124|emb|CAZ82398.1| unnamed protein product [Tuber melanosporum]
          Length = 237

 Score = 86.1 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 53/183 (28%)

Query: 2   HQYLDLLRHVIKFGSDRRD--------------------------RTGVGTRSTFGYQ-M 34
           +QYLDL+ +++  G  RRD                          RT  GT S F  Q +
Sbjct: 52  YQYLDLVYNILTNGERRRDMCSTISYPFYTHPRRKHSLTNPHQLKRTRAGTISLFAPQQL 111

Query: 35  RFDLSKG-FPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADK------- 86
           RF+L    FPLLT K V  K+++HE LWF+ G ++ + L   GV IW+E   +       
Sbjct: 112 RFNLKNNTFPLLTKKHVFHKAIIHEPLWFVSGSTSNAPLSAVGVKIWEENGSRAYLDSIG 171

Query: 87  -----DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141
                +G+LGP+Y  + R         +D               RRH    ++     + 
Sbjct: 172 LTERAEGDLGPVYRFRLRH---LGAKYVDCFHHY----------RRHFHPRYHFHHHPQS 218

Query: 142 ALP 144
            +P
Sbjct: 219 QIP 221


>gi|159028338|emb|CAO87236.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 497

 Score = 84.9 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 13/159 (8%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           + ++L  +   I D+     G +   YG + RSW        DQI+ ++  L ++  +  
Sbjct: 253 DRAFLTEYIGQILDDSPIHQG-VKYTYGQRLRSWFGR-----DQIAQVINKLISEIDAAS 306

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            ++S W+V   +K    PC       V   +LS     RS D+F   P N      L   
Sbjct: 307 AVMSLWDVKDHEKGGS-PCLNHIWVRVVENELSLTAIFRSNDMFAAWPANAMGLRALQQH 365

Query: 188 LASVI------GFQYGEFIHTLGDVHLYNNHFEQADLQL 220
           +   I          G  I      H+Y++ +E  +  +
Sbjct: 366 IRDEISKRSEYNLSMGPLITISQSAHIYDDTWENVERLI 404


>gi|298493070|ref|YP_003723247.1| thymidylate synthase ['Nostoc azollae' 0708]
 gi|298234988|gb|ADI66124.1| thymidylate synthase ['Nostoc azollae' 0708]
          Length = 497

 Score = 84.9 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 14/161 (8%)

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
           +L ++   I D+  +++G +   YG + RSW        DQI  +V  L  +  +   ++
Sbjct: 256 FLEQYISQILDDSPNREG-VKYTYGQRLRSWFGR-----DQIEQVVNKLVGEIDAASAVM 309

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           + W+V   D+    PC       + + +LS     RS D+F   P N      L   +  
Sbjct: 310 TLWDVKDHDQGGS-PCLNHIWLRIVDNELSLTATLRSNDMFAAWPANAMGLRALQKHIRD 368

Query: 191 VI------GFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
            I        + G  I      H+Y++ +  A  QL +   
Sbjct: 369 EIAKRSEYDLKMGPLITLSQSAHIYDDTWSNA-EQLIQEQY 408


>gi|193211965|ref|YP_001997918.1| thymidylate synthase [Chlorobaculum parvum NCIB 8327]
 gi|193085442|gb|ACF10718.1| thymidylate synthase [Chlorobaculum parvum NCIB 8327]
          Length = 343

 Score = 83.4 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 88/242 (36%), Gaps = 33/242 (13%)

Query: 12  IKFGSDRRDRTGVGTRSTFGYQMR--FDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNV 69
           IK G  R+ R G          M    + +     +  ++ +      E LW   G +++
Sbjct: 21  IKEGVKRKTR-GKLCIELPKPFMFKITNPTARLVTVPERRWNPILPFAESLWLATGKNDL 79

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV-----------------IDQI 112
            ++  H +     ++D    L   YG + R +   + +                  +DQ 
Sbjct: 80  EFI-GHYLKNMKNFSDDGEFLRGGYGPRLRKYNGINDDYKIRNTYDIDIAKLNKSEVDQF 138

Query: 113 SSIVQSLRADPYSRRHIVSAWNVAL--------IDKMALPPCHCLFQFY--VDNGKLSCQ 162
             I +S   D ++R+ I++  +           +      PC  L  F       KL+  
Sbjct: 139 GFICKSFEKDKFTRQAIINIGDPPKDCFDKKGNLKITKDFPCTRLLHFQKQPKANKLNLT 198

Query: 163 LYQRSGDVFLGI-PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           +Y RS D   G    NI +++ +    + ++  + GE+ H   + H Y   FE     +S
Sbjct: 199 VYMRSNDFVWGASAVNIFNFTFMLEYFSQILDLEIGEYYHIANNFHYYEE-FEDLVQSIS 257

Query: 222 RS 223
           R+
Sbjct: 258 RT 259


>gi|73748623|ref|YP_307862.1| thymidylate synthase [Dehalococcoides sp. CBDB1]
 gi|147669382|ref|YP_001214200.1| thymidylate synthase-like protein [Dehalococcoides sp. BAV1]
 gi|289432648|ref|YP_003462521.1| thymidylate synthase [Dehalococcoides sp. GT]
 gi|73660339|emb|CAI82946.1| thymidylate synthase [Dehalococcoides sp. CBDB1]
 gi|146270330|gb|ABQ17322.1| Thymidylate synthase-like protein [Dehalococcoides sp. BAV1]
 gi|288946368|gb|ADC74065.1| thymidylate synthase, putative [Dehalococcoides sp. GT]
          Length = 217

 Score = 83.4 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 49/108 (45%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           QI+ +++  R   ++               +  PPC       V  GKL   +Y RS D+
Sbjct: 103 QIAKVIKMYRETGFNTNQAFMTVGNPETLDLEDPPCLRSIDTRVRYGKLHFIIYFRSWDL 162

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           + G P N+A+  LL   +A+ IG + GE I     +H+Y+  ++ A  
Sbjct: 163 WAGFPSNLAAIQLLKEYMAAEIGVEDGEIIAMSKGMHIYDYAWDIAKT 210


>gi|270308125|ref|YP_003330183.1| thymidylate synthase [Dehalococcoides sp. VS]
 gi|270154017|gb|ACZ61855.1| thymidylate synthase [Dehalococcoides sp. VS]
          Length = 217

 Score = 83.0 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 49/108 (45%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           QI+ +++  +   ++               +  PPC       V  GKL   +Y RS D+
Sbjct: 103 QIAKVIKMYKETGFNTNQAFMTVGNPETLDLEDPPCLRSIDTRVRYGKLHFIIYFRSWDL 162

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           + G P N+A+  +L   +A+ IG + GE I     +H+Y+  ++ A  
Sbjct: 163 WAGFPSNLAAIQMLKEYMAAEIGVEDGEIIAMSKGMHIYDYAWDIAKT 210


>gi|66392082|ref|YP_239304.1| putative thymidylate synthase [Xanthomonas phage Xp15]
 gi|62529192|gb|AAX84875.1| putative thymidylate synthase [Xanthomonas phage Xp15]
          Length = 273

 Score = 83.0 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 83/237 (35%), Gaps = 16/237 (6%)

Query: 6   DLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRG 65
           DL+      G   + R G+  R     Q+       F     +K        E+ W L G
Sbjct: 13  DLMLRTFTQGFVSKPR-GMEIRELLNAQVTVQTFVPFQCWPDRKYDIGYFKKEMRWKL-G 70

Query: 66  DSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYS 125
            S      +    +W+   + DG     YG  W             +  +V  L  D  S
Sbjct: 71  ASKFDDSIKQHAKMWESVQNPDGTFNSNYGQFWFGQQMG-------VMKVVMELIRDQDS 123

Query: 126 RRHIV-SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLL 184
           RR I+    +  L  +     C     F++ +  L   ++ RS D   G+  +I ++S+L
Sbjct: 124 RRAIIPMLTDDHLSPETVDTVCTEAVSFHIRHNTLYTSVHMRSSDQIFGLGTDIPTFSVL 183

Query: 185 TMML-----ASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR-SPRTLPQMIINPN 235
           T ++     A+    Q G    T    H+Y  H+   D  L         +++I P 
Sbjct: 184 THLVHGLLQANYPSLQVGSMTITAASSHIYERHYRMVDKILDNLEDIPDSEIVILPQ 240


>gi|240276636|gb|EER40147.1| thymidylate synthase [Ajellomyces capsulatus H143]
          Length = 65

 Score = 82.2 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 203 LGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVD---LLSFRYEDFTLRSYEPHAAIL 259
           +GD H+Y +H E    QL+R P   P++II  +      +  ++ E+F +  Y+PH  I 
Sbjct: 1   MGDAHVYLDHIEALQEQLTREPVEFPELIIKRDDRGSGIMDGWKEEEFEVVGYKPHKGIK 60

Query: 260 AKVSV 264
            K+SV
Sbjct: 61  MKMSV 65


>gi|300087783|ref|YP_003758305.1| thymidylate synthase [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527516|gb|ADJ25984.1| thymidylate synthase, putative [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 215

 Score = 82.2 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 50/108 (46%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           QI+ +++  R + ++               +A PPC       V  GKL   +Y RS D+
Sbjct: 103 QIAEVIRMYREEGFNTNQAFMTVGNPEAISLADPPCLRSVDTRVRYGKLHFVVYFRSWDL 162

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           + G P N+A+  LL   +A  IG + G+ I     +HLY+  +E A  
Sbjct: 163 WAGFPSNLAALQLLKEYMAGEIGVEDGQIIAISKGLHLYDYSWEIART 210


>gi|289191763|ref|YP_003457704.1| thymidylate synthase, methanogen type [Methanocaldococcus sp.
           FS406-22]
 gi|288938213|gb|ADC68968.1| thymidylate synthase, methanogen type [Methanocaldococcus sp.
           FS406-22]
          Length = 222

 Score = 81.9 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 5/111 (4%)

Query: 107 NVIDQISSIVQSLRADPYSRRHIVSAWNVALI-----DKMALPPCHCLFQFYVDNGKLSC 161
             I+QI+ I++ L     SRR +   WN  +      D+    PC  L QF + +  L  
Sbjct: 95  EKINQINYIIEKLNQQKNSRRAVAITWNPKIDIDISRDERGSVPCLQLLQFLIRDDNLYM 154

Query: 162 QLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            +  RS D  +    N      L  ++A     +  E++H    +H+Y + 
Sbjct: 155 TVVFRSNDALIAFVANALGLISLGELVAEKTNTKLKEYVHHSISMHVYIDR 205


>gi|332711138|ref|ZP_08431072.1| thymidylate synthase [Lyngbya majuscula 3L]
 gi|332350120|gb|EGJ29726.1| thymidylate synthase [Lyngbya majuscula 3L]
          Length = 502

 Score = 81.5 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 69/188 (36%), Gaps = 21/188 (11%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           +  ++  +   I D+    +G +   YG + RSW        DQI  ++  L  +  +  
Sbjct: 257 DRDFIQEYIHQILDDAPVVEG-VKYTYGQRLRSWFGR-----DQIEQVITKLIGEIDAAS 310

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMM 187
            ++S W+V   +K    PC       V + +LS     RS D+F     N      L   
Sbjct: 311 AVMSLWDVKDHEKGGS-PCLNHIWLRVVDNELSLTATLRSNDMFSAWAANAFGLRALQQY 369

Query: 188 LASV------IGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIV---- 237
           +         I  + G  I      H+Y++ ++ AD  +    + L    IN        
Sbjct: 370 VKDQIAKRGGIQLKMGPLITVSQSAHIYDDCYDYADRIIKNQYQKL----INSEQKQYAD 425

Query: 238 DLLSFRYE 245
            + +F  E
Sbjct: 426 SIGNFLIE 433


>gi|254483604|ref|ZP_05096827.1| hypothetical protein GPB2148_2750 [marine gamma proteobacterium
           HTCC2148]
 gi|214036113|gb|EEB76797.1| hypothetical protein GPB2148_2750 [marine gamma proteobacterium
           HTCC2148]
          Length = 49

 Score = 81.1 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 26/49 (53%)

Query: 216 ADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
              QLSR PR LP+M I      +  + +EDF L  Y PH  I A V+V
Sbjct: 1   MQEQLSREPRALPRMNILRRPDSIYDYCFEDFELVDYNPHGHISAPVAV 49


>gi|327401179|ref|YP_004342018.1| thymidylate synthase [Archaeoglobus veneficus SNP6]
 gi|327316687|gb|AEA47303.1| thymidylate synthase [Archaeoglobus veneficus SNP6]
          Length = 431

 Score = 81.1 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 6/135 (4%)

Query: 91  GPIYGVQWR-SWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
           G +Y    R  + + D   +DQ+   ++ LR +   R   V       +     PPC   
Sbjct: 285 GEVYTYAERARYCENDEVKVDQLYMCMEKLREERCRRDCYVGISRPWDL-TSDEPPCLRG 343

Query: 150 FQFYV----DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGD 205
           +Q       D  +L+   Y RS D++  +  N+ +++ LT  +A +  F    + H   D
Sbjct: 344 YQLVCEIQNDCNRLAGIFYMRSNDIYGAMHANMFAFATLTEYVAELTDFSGCTYYHFAND 403

Query: 206 VHLYNNHFEQADLQL 220
            H+Y    +     L
Sbjct: 404 AHIYGEFIDAVKEIL 418



 Score = 54.9 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 5/121 (4%)

Query: 101 WPDYDGNVIDQISSIVQ----SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN 156
           W     +  D++  ++      LRA PY+RR  +  W          PP      F   N
Sbjct: 56  WQICRESYFDRVEGLLDVAAERLRAKPYTRRISIPIWLPKD-HLCETPPAITEVSFLYFN 114

Query: 157 GKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
            +L+   + RS D       +    + +   ++   G + G     +   H+Y    E+A
Sbjct: 115 DRLNVTAFVRSLDALNYFTPDSDFLNYMLEEVSEKSGLEKGSIAMLISCPHIYERDVERA 174

Query: 217 D 217
           +
Sbjct: 175 E 175


>gi|254516470|ref|ZP_05128529.1| putative thymidylate synthase [gamma proteobacterium NOR5-3]
 gi|219674893|gb|EED31260.1| putative thymidylate synthase [gamma proteobacterium NOR5-3]
          Length = 191

 Score = 80.7 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)

Query: 104 YDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQL 163
           YD N IDQ   +V  LR    ++   +S     L    A  PC C+    + NGKL+ Q 
Sbjct: 54  YDMNGIDQFDWMVGRLRNKSETKSAAISLLVPGL--NQANLPCLCVVDSKIRNGKLNLQF 111

Query: 164 YQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRS 223
           + RS +VF     N+ + + L   LA+ +G   G     +   H+Y    E+A   +   
Sbjct: 112 FFRSQNVFGRQYANLVAIARLQEKLAASVGCDIGILKGYIASAHIYEYDLEEARSLVEGR 171

Query: 224 P 224
           P
Sbjct: 172 P 172


>gi|169835571|ref|ZP_02868759.1| thymidylate synthase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 61

 Score = 79.9 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 202 TLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAK 261
           T+ D H+Y NH E    QL+R P  L ++ I           +ED TL  YE + AI  +
Sbjct: 1   TIIDAHIYENHIEGLKEQLTRKPLKLAKIKIADKP--FNELTFEDITLEDYESYPAIKFE 58

Query: 262 VSV 264
           V+V
Sbjct: 59  VAV 61


>gi|57234449|ref|YP_181546.1| thymidylate synthase, putative [Dehalococcoides ethenogenes 195]
 gi|57224897|gb|AAW39954.1| thymidylate synthase, putative [Dehalococcoides ethenogenes 195]
          Length = 217

 Score = 79.5 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 49/108 (45%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           QI+ +++  R   ++               +  PPC       +  GKL   +Y RS D+
Sbjct: 103 QIAKVIKMYRDTGFNTNQAFMTVGNPETLDLEDPPCLRSIDTRIRYGKLHFVIYFRSWDL 162

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           + G P N+A+  +L   +A+ IG + GE I     +H+Y+  ++ A  
Sbjct: 163 WAGFPSNLAAIQMLKEYMAAEIGVEDGEIIAMSKGMHIYDYAWDIAKT 210


>gi|301057695|ref|ZP_07198768.1| putative thymidylate synthase [delta proteobacterium NaphS2]
 gi|300448156|gb|EFK11848.1| putative thymidylate synthase [delta proteobacterium NaphS2]
          Length = 228

 Score = 79.2 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 53/108 (49%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           QI+ +++  R D +               ++  PPC       + +GKL   +Y RS D+
Sbjct: 106 QITEVIRMYREDGFGTNQAYMTVGDPKAIQLVDPPCLRGIDTRIKDGKLHFIVYFRSWDL 165

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADL 218
           + G+P N+ +  LL   +AS IG + GE I +   +HLY+  +E A L
Sbjct: 166 WNGLPANLGAIQLLKEYMASSIGVEDGEIIASSKGLHLYDYVWELAQL 213


>gi|20094806|ref|NP_614653.1| thymidylate synthase [Methanopyrus kandleri AV19]
 gi|25091476|sp|Q8TVL9|TYSY_METKA RecName: Full=Putative thymidylate synthase; Short=TS; Short=TSase
 gi|19888018|gb|AAM02583.1| Thymidylate synthase [Methanopyrus kandleri AV19]
          Length = 209

 Score = 79.2 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 48/147 (32%), Gaps = 4/147 (2%)

Query: 71  YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
            L  H V  +++        G  Y    R         +DQ++ IV+ L     +RR I 
Sbjct: 65  PLDEHSVRAYEDQLLDPELRGFEYTYGHR---LRRYFGLDQVTKIVERLSESNNTRRAIA 121

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGK-LSCQLYQRSGDVFLGIPFNIASYSLLTMMLA 189
             W+          PC    Q   D G  L    + RS DV   +  N+ +   L   +A
Sbjct: 122 VTWDPRRDLDEEEVPCLTALQLQSDGGSGLELHAFYRSWDVGKALVANMIALRRLQEHVA 181

Query: 190 SVIGFQYGEFIHTLGDVHLYNNHFEQA 216
              G +         + H+Y       
Sbjct: 182 ERAGLEPTTLTVYAANAHVYEEDLPDL 208


>gi|258539603|ref|YP_003174102.1| thymidylate synthase [Lactobacillus rhamnosus Lc 705]
 gi|257151279|emb|CAR90251.1| Thymidylate synthase [Lactobacillus rhamnosus Lc 705]
          Length = 57

 Score = 79.2 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/53 (60%), Positives = 37/53 (69%)

Query: 2  HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKS 54
            YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV  + 
Sbjct: 4  QPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVTIRP 56


>gi|88603057|ref|YP_503235.1| thymidylate synthase-like protein [Methanospirillum hungatei JF-1]
 gi|88188519|gb|ABD41516.1| Thymidylate synthase-like protein [Methanospirillum hungatei JF-1]
          Length = 285

 Score = 79.2 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 70/230 (30%), Gaps = 41/230 (17%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLW 61
            QY   L  +    + RRD  G     T+G ++R        +++      K  +     
Sbjct: 69  EQYQASLYTI----TPRRD-DGTDAVYTYGNRLRDYPKAEVGIVSKHGGAVKKAI----- 118

Query: 62  FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISS-IVQSLR 120
                              D    K G +      +     D     IDQI   I+  L 
Sbjct: 119 -------------------DALFRKLGYVPADACGELIWKGDGRYGGIDQIQESIINRLI 159

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNIA 179
            +P SRR I   W          PPC  L Q  +D N  L+     RS D+      N  
Sbjct: 160 QNPESRRAISITWFPVQDITADEPPCLQLVQCVIDKNNHLNLICVFRSNDMLSAWGQNAY 219

Query: 180 SYSLLTMMLASVIGFQ---------YGEFIHTLGDVHLYNNHFEQADLQL 220
             + L   +   I  +          G         H+Y  H +Q +L L
Sbjct: 220 GLAHLQKFICEQINLKRKNAEEKVSQGWLETISISAHMYF-HRDQLELNL 268


>gi|115739464|ref|XP_001198552.1| PREDICTED: similar to GA16493-PA, partial [Strongylocentrotus
           purpuratus]
 gi|115969033|ref|XP_001185436.1| PREDICTED: similar to GA16493-PA, partial [Strongylocentrotus
           purpuratus]
          Length = 45

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 27/45 (60%)

Query: 220 LSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           L R PR  P++ I   + ++  F++EDF +  Y+P+  I  +++V
Sbjct: 1   LKRVPRQFPKLNIKRKVTNIDDFKFEDFEIEGYKPYPKITMQMAV 45


>gi|161622540|ref|YP_001595168.1| hypothetical protein EpJS98_gp039 [Enterobacteria phage JS98]
 gi|238695195|ref|YP_002922388.1| hypothetical protein EpJS10_0039 [Enterobacteria phage JS10]
 gi|160331891|gb|AAU29230.2| hypothetical protein EpJS98_0039 [Enterobacteria phage JS98]
 gi|220029331|gb|ACL78265.1| hypothetical protein EpJS10_0039 [Enterobacteria phage JS10]
          Length = 232

 Score = 77.2 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 63/174 (36%), Gaps = 14/174 (8%)

Query: 56  VHELLW--FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG-NVIDQI 112
             E  W   + G ++ +   +   ++         ++ P        +  + G  ++ Q+
Sbjct: 65  YAESFWKFMISGGTDAAEAFKEYPNVAKFIDKPKSDVLPAN------FNTFYGPRIVAQL 118

Query: 113 SSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            ++++ L+    SRR +              D+    PC     +Y+ +G+L    + RS
Sbjct: 119 PALLKELKEKANSRRVVFQILQEQDQALLDSDESLEYPCTDSVTYYIRDGRLYAHTHMRS 178

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +  + +  +      L   +A   G   G + HT+   H++   F+     L 
Sbjct: 179 QNCAVVMQLDFYLQGKLMAFIAEQCGVGLGTYSHTMVSAHVFERDFDYVRGFLK 232


>gi|299778996|ref|YP_003734190.1| hypothetical protein EME08_gp040 [Enterobacteria phage IME08]
 gi|298105725|gb|ADI55369.1| hypothetical protein [Enterobacteria phage IME08]
          Length = 232

 Score = 77.2 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 64/182 (35%), Gaps = 14/182 (7%)

Query: 48  KKVHWKSVVHELLW--FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYD 105
           +         E  W   + G ++ +   +   ++         ++ P        +  + 
Sbjct: 57  RINRINYDYAESFWKFMISGGTDAAEAFKEYPNVAKFIDKPKSDVLPAN------FNTFY 110

Query: 106 G-NVIDQISSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKL 159
           G  ++ Q+ ++++ L+    SRR +              D+    PC     +Y+ +G+L
Sbjct: 111 GPRIVAQLPALLKELKEKENSRRVVFQILQEQDQALLDSDESLEYPCTDSVTYYIRDGRL 170

Query: 160 SCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQ 219
               + RS +  + +  +      L   +A   G   G + HT+   H++   F+     
Sbjct: 171 YAHTHMRSQNCAIVMQLDFYLQGKLMAFIAEQCGVGLGTYSHTMVSAHVFERDFDYVRGF 230

Query: 220 LS 221
           L 
Sbjct: 231 LK 232


>gi|311992830|ref|YP_004009697.1| hypothetical protein Acj61p080 [Acinetobacter phage Acj61]
 gi|295815119|gb|ADG36045.1| conserved hypothetical phage protein [Acinetobacter phage Acj61]
          Length = 237

 Score = 76.5 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 14/191 (7%)

Query: 38  LSKGFPLLTTKKVHWKSVVHELLW--FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYG 95
             +G      K         E  W   + G ++     +   ++    A    E  P   
Sbjct: 49  PEEGATFGNKKINRIDYNYAEKFWEFMIAGGTDAEQAFKEYPNVAKFLAKPKTESLPAN- 107

Query: 96  VQWRSWPDYDGNVID-QISSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCL 149
                +  + G  I  Q+ ++++ L+    SRR +              D+    PC   
Sbjct: 108 -----FNTFYGPRIAAQMPALIKELKEKENSRRVVFQILQEQDQVLLDADETLEYPCTDS 162

Query: 150 FQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLY 209
             FY+  G+L    + RS +  + +  +          +A   G + G + H++   H++
Sbjct: 163 VTFYIREGRLYAHTHMRSQNCAVVMQLDFYLMQKFMQHIADKCGVELGTYSHSIVSAHVF 222

Query: 210 NNHFEQADLQL 220
               E     L
Sbjct: 223 ERDLEYVKTFL 233


>gi|21700319|gb|AAM75819.1|AF485373_1 thymidylate synthase [Mastigamoeba balamuthi]
          Length = 65

 Score = 76.5 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 8/65 (12%)

Query: 91  GPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
           GP+YG QWR +         DY G  IDQ+ ++++ +R DP SRR I+SAWN   ++KMA
Sbjct: 1   GPVYGFQWRHFGAEYTNMNADYAGKGIDQLKNVIEMIRHDPSSRRIIMSAWNPLDLEKMA 60

Query: 143 LPPCH 147
           LPPCH
Sbjct: 61  LPPCH 65


>gi|33304370|gb|AAQ02614.1| thymidylate synthase [Hartmannella cantabrigiensis]
          Length = 65

 Score = 76.5 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 8/65 (12%)

Query: 91  GPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMA 142
           GP+YG QWR +         DY G  +DQ+  ++  L+ +P  RR ++SAWN A +D+MA
Sbjct: 1   GPVYGFQWRHFGAKYVDMHTDYTGQGVDQLKDVIHKLKTNPNDRRIVMSAWNPADLDQMA 60

Query: 143 LPPCH 147
           LPPCH
Sbjct: 61  LPPCH 65


>gi|308273673|emb|CBX30275.1| hypothetical protein N47_D30840 [uncultured Desulfobacterium sp.]
          Length = 220

 Score = 76.1 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 50/115 (43%)

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDV 170
           QI  ++Q  + D +                +  PPC       +  GKL   +Y RS D+
Sbjct: 106 QIKEVIQMYKNDGHGTNQAYMTVGDPSTIYLGDPPCLRGIDTRIRYGKLHFMVYFRSWDL 165

Query: 171 FLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR 225
           + G P N+ +  LL   ++  IG Q GE I     +HLY+  +E A L+  R+  
Sbjct: 166 WNGFPANLGAIQLLKEYMSLEIGVQDGEIIAASKGLHLYDYIWELAKLRTLRTEY 220


>gi|119719856|ref|YP_920351.1| thymidylate synthase-like [Thermofilum pendens Hrk 5]
 gi|119524976|gb|ABL78348.1| Thymidylate synthase-like protein [Thermofilum pendens Hrk 5]
          Length = 460

 Score = 75.7 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 8/136 (5%)

Query: 87  DGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPC 146
           +GE G +Y    R     +    DQ+  IV+ L + P +RR I   W+ A       PPC
Sbjct: 233 EGEEGAVYSYGDRLRRHREAG--DQVRRIVERLASSPDTRRAIALTWDFATDTNSQDPPC 290

Query: 147 HCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIG------FQYGEFI 200
               Q  +     +   + RS D +   P N      L   +A  +        + G  +
Sbjct: 291 LVAVQGDLSGDTYNQVAFFRSHDAYAAWPLNAYGLLALMRRVAGELSERTGRAVKPGWLV 350

Query: 201 HTLGDVHLYNNHFEQA 216
                +H+Y + + +A
Sbjct: 351 VYSSSLHVYEHDWGRA 366


>gi|300869012|ref|ZP_07113615.1| hypothetical protein OSCI_3890023 [Oscillatoria sp. PCC 6506]
 gi|300332992|emb|CBN58807.1| hypothetical protein OSCI_3890023 [Oscillatoria sp. PCC 6506]
          Length = 354

 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 6/159 (3%)

Query: 51  HWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVID 110
           +    V +  + L G + +  +  +         D    +        R +    G  ID
Sbjct: 77  NPSLAVAKFFYLLSGSNQIEDIAFYSNGARRYTDDG---IIMPGAHGSRIFYPVVG--ID 131

Query: 111 QISSIVQSLRADPYSRRHIVSAWNVALI-DKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           Q  +    +R    S+R  ++ +       K    PC     F   NGKL    Y R+ D
Sbjct: 132 QFEASAHLIREKKSSKRVTLAIYQPNDCGRKSQDIPCIVSIIFSPRNGKLHTTAYMRAND 191

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           V+  + +++   ++L   +A+    + G + H +  +HL
Sbjct: 192 VYRILCYDLFELTMLAEFMAAYTDIELGYYYHIVTSMHL 230


>gi|553026|gb|AAA88467.1| dCMP hydroxymethylase [Enterobacteria phage T4]
          Length = 186

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 61/165 (36%), Gaps = 15/165 (9%)

Query: 20  DRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSI 79
           D+TGV T    G     D    F  L  +      +  EL W+      V  +      I
Sbjct: 27  DKTGVKTIEIIGASFVADEPFIFGALNDE-----YIQRELEWYKSKSLFVKDIPGETPKI 81

Query: 80  WDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL-- 137
           W + A   GE+   YG     W  +  +   Q    +  L  +P SRR I+     ++  
Sbjct: 82  WQQVASSKGEINSNYG-----WAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQF 136

Query: 138 ---IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
               D M+   C    Q+ + + K++  +  RS DV  G   + A
Sbjct: 137 DYNKDGMSDFMCTNTVQYLIRDKKINALVNMRSNDVVFGFRNDYA 181


>gi|325958738|ref|YP_004290204.1| thymidylate synthase [Methanobacterium sp. AL-21]
 gi|325330170|gb|ADZ09232.1| thymidylate synthase, methanogen type [Methanobacterium sp. AL-21]
          Length = 215

 Score = 72.6 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 43/107 (40%)

Query: 110 DQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGD 169
           DQI S++  L+ +  +RR +++ ++ ++       P   +    +   ++      RS D
Sbjct: 104 DQIESVLVRLKRNSTTRRAVITIFDPSIDHYKDNVPSLVMIDIIIRKNRIYLTAVCRSVD 163

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQA 216
            +     N  +   L   L++ +  + G         H+Y  +++  
Sbjct: 164 YYGSWIQNFFALRGLLKYLSNHLKVKMGPITIHSVSAHVYKRNYKDV 210


>gi|311992571|ref|YP_004009439.1| putative thymidylate synthase [Acinetobacter phage Ac42]
 gi|298684354|gb|ADI96315.1| putative thymidylate synthase [Acinetobacter phage Ac42]
          Length = 235

 Score = 72.6 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 77/230 (33%), Gaps = 21/230 (9%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKV-HWKSVVHEL 59
           ++QY      V++      D             +   L +   + +  ++        E 
Sbjct: 17  LNQY------VVENYEFETDSRIGKCLEVGSILVEVALPEKGAVFSDSRISRIDYDYAEK 70

Query: 60  LW--FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG-NVIDQISSIV 116
            W   ++G ++     +   S+    A    E  P        +  + G  ++ Q+ +++
Sbjct: 71  FWEFMIQGGTDAEEAFKDYASVAKFIAKPKSENLPSN------FNTFYGPRIVAQMPALL 124

Query: 117 QSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           + LR    SRR +              D+    PC     FY+ N +L    + RS +  
Sbjct: 125 KELREKENSRRVVFQILQEQDQVLLDSDETLEYPCTDSITFYIRNNQLFMHTHMRSQNCA 184

Query: 172 LGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
           + +  +        M +A  +G   G + H++   H++    +     L 
Sbjct: 185 VVMQLDFYLMQRFMMYMAEQLGISVGTYSHSIVSAHVFERDLDYVKTFLE 234


>gi|311993361|ref|YP_004010226.1| gp42 dCMP hydroxymethylase [Acinetobacter phage Acj9]
 gi|295917318|gb|ADG59989.1| gp42 dCMP hydroxymethylase [Acinetobacter phage Acj9]
          Length = 234

 Score = 72.6 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 15/174 (8%)

Query: 56  VHELLW--FLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDG-NVIDQI 112
             E  W   + G ++     +   ++            P       ++  + G  ++ Q+
Sbjct: 67  YAEKFWEFMISGGTDAKEAFKEYPNVAKFIDK------PKSSELPENFNTFYGPRIVAQL 120

Query: 113 SSIVQSLRADPYSRRHIVSAWNVAL-----IDKMALPPCHCLFQFYVDNGKLSCQLYQRS 167
            +I++ L   P SRR ++             ++    PC     F V + +L+   + RS
Sbjct: 121 PAILKEL-EKPNSRRAVIQILQEQDQVLLDANETLEYPCTDSITFSVRDDRLNMHTHMRS 179

Query: 168 GDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
            +V   +  +      L   +A  +  +   + HT+   H+Y    E     L+
Sbjct: 180 QNVATVMQLDFFLMHKLFAYVADKLDLEMDTYTHTIVSAHIYERDVEYVRGFLN 233


>gi|328462354|gb|EGF34424.1| thymidylate synthase [Lactobacillus rhamnosus MTCC 5462]
          Length = 59

 Score = 71.5 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/45 (64%), Positives = 34/45 (75%)

Query: 7  LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVH 51
          +L+ V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKK H
Sbjct: 2  ILQKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKYH 46


>gi|32396172|gb|AAP42245.1| thymidylate synthase [Baboon gamma-herpesvirus]
          Length = 63

 Score = 71.5 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 103 DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNG 157
           DY+G  +DQ+  +V  +   PY RR ++ AWN A + +MALPPCH L QFYV  G
Sbjct: 9   DYEGQGVDQLRYVVDLIARRPYDRRIVMCAWNPADLAQMALPPCHVLCQFYVARG 63


>gi|218781981|ref|YP_002433299.1| thymidylate synthase-like protein [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763365|gb|ACL05831.1| thymidylate synthase-like protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 263

 Score = 70.3 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 1/144 (0%)

Query: 81  DEWADKDGELGPIYGVQWRSWPDYDGN-VIDQISSIVQSLRADPYSRRHIVSAWNVALID 139
           D W  ++ E+        +   + DG   ++QI  I+Q+ +   +    +V         
Sbjct: 120 DWWQAQNKEIIDFREPDGKVVYEKDGQLYLNQIEWIIQTYKNFGHRNNQMVLQVAHPSDL 179

Query: 140 KMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEF 199
            +  PPC       + +G L   +Y RS D++ G+P N+A    L   +A+ IG + GE 
Sbjct: 180 TLLDPPCLRSIDTRIQDGTLHFFVYFRSWDLWGGLPANLAGIQNLKEYMANEIGVKDGEM 239

Query: 200 IHTLGDVHLYNNHFEQADLQLSRS 223
           +     +HLY    + A L+  R 
Sbjct: 240 VVESKGLHLYGYAEDLAKLRCLRD 263


>gi|26984051|gb|AAN85116.1| Orf105 [Citrobacter freundii]
 gi|60280767|gb|AAX18271.1| thymidylate synthase-like protein [Escherichia coli]
 gi|60280779|gb|AAX18282.1| thymidylate synthase-like protein [Escherichia coli]
 gi|225730221|gb|ACO24932.1| thymidylate synthase-like protein [Escherichia coli]
          Length = 105

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWK 53
          M  Y DLLR VI  G+D  DRTGVGT S +G  ++F+L +GFP  T K + WK
Sbjct: 1  MDNYKDLLREVIITGTDSVDRTGVGTVSIWGAMLKFNLQEGFPATTCKGLAWK 53


>gi|182413146|ref|YP_001818212.1| thymidylate synthase-like protein [Opitutus terrae PB90-1]
 gi|177840360|gb|ACB74612.1| Thymidylate synthase-like protein [Opitutus terrae PB90-1]
          Length = 295

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 18/173 (10%)

Query: 69  VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDY---DGNVIDQISSIVQSLRADPYS 125
           V  ++    + W+      G L      Q           G  ++QI +++  L   P++
Sbjct: 88  VKNMNDPKDTRWEYTY--HGRLAAYGTWQESRDGQPVRVGGFNVNQIEAVIAKLVKQPFT 145

Query: 126 RRHIVSAWNVALIDKMALPPCHCLFQFYVDNG-----KLSCQLYQRSGDVFLGIPFNIAS 180
           R+  +  W   +  +   PPC     + +         L+C +  RS D +     N+  
Sbjct: 146 RQAQMITWMPNIDLECYDPPCLQSLWYRLMEDDDGVSWLNCNVRFRSNDAWGASFMNMFG 205

Query: 181 YS-----LLTMMLASVIG--FQYGEFIHTLGDVHLYNNHFEQADLQL-SRSPR 225
           +      ++   +A   G   + G         H+Y     +A  +L  R PR
Sbjct: 206 FVIFNRDVIAAEIARRTGKTIKLGRLNWQADSYHIYGKDIAEAKARLFDRIPR 258


>gi|225730207|gb|ACO24919.1| thymidylate synthase-like protein [Enterobacter aerogenes]
          Length = 105

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/53 (52%), Positives = 35/53 (66%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWK 53
          M  Y DLLR VI  G+D  DRTGVGT S +G  ++F+L +GFP  T K + WK
Sbjct: 1  MDNYKDLLREVIITGADSVDRTGVGTVSIWGAMLKFNLQEGFPATTCKGLAWK 53


>gi|152002540|dbj|BAF73564.1| thymidylate synthase [Onion yellows phytoplasma OY-W]
          Length = 44

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/42 (57%), Positives = 31/42 (73%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGF 42
          M+ YLDL R +++ GS R DRT  G +S FGYQMRF+L +GF
Sbjct: 1  MNTYLDLCRFILQKGSFRNDRTNTGNKSVFGYQMRFNLEEGF 42


>gi|222444774|ref|ZP_03607289.1| hypothetical protein METSMIALI_00387 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350653|ref|ZP_05976070.1| putative thymidylate synthase, methanogen type [Methanobrevibacter
           smithii DSM 2374]
 gi|222434339|gb|EEE41504.1| hypothetical protein METSMIALI_00387 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861435|gb|EFC93733.1| putative thymidylate synthase, methanogen type [Methanobrevibacter
           smithii DSM 2374]
          Length = 232

 Score = 67.2 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 80/227 (35%), Gaps = 16/227 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTT-KKVHWKSVVHELLWF 62
           YLD ++ ++  G +    +    + + G     D       +   + +    +++E+   
Sbjct: 8   YLDFVKKILNQGKETYKDSNHHLKESLGNFYVIDDPLNLKFVAKYQHMTTDMMLNEIK-- 65

Query: 63  LRGDSNVS--YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
             G  ++    +    +  + +  +   + G +Y    R    +D   +DQ   + + + 
Sbjct: 66  -SGKYDIEGCPIKSDALYEYVKSFENSDDQGFVYTYPNRILAHFD---VDQFEVMKKRML 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S R +   ++  L       PC    Q  V N +L+     RS D+F     N+  
Sbjct: 122 HAIGSNRAVAVTYDPKLDQDREDIPCLQFLQCIVRNNELTIHCLFRSNDIFGAFYSNMFF 181

Query: 181 YSLLTMMLASVIGFQY-------GEFIHTLGDVHLYNNHFEQADLQL 220
            + + + +   +  +        G   +     H+Y+N  + A   +
Sbjct: 182 IAYIGIKMKEELNKELLGEKVNFGGIHYHSTSGHIYSNDMKAAKKLI 228


>gi|148643794|ref|YP_001274307.1| thymidylate synthase, ThyA [Methanobrevibacter smithii ATCC 35061]
 gi|148552811|gb|ABQ87939.1| predicted thymidylate synthase, ThyA [Methanobrevibacter smithii
           ATCC 35061]
          Length = 232

 Score = 66.4 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 80/227 (35%), Gaps = 16/227 (7%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTT-KKVHWKSVVHELLWF 62
           YLD ++ ++  G +    +    + + G     D       +   + +    +++E+   
Sbjct: 8   YLDFVKKILNQGKETYKDSNHHLKESLGNFYVIDDPLNLKFVAKYQHMTTDMMLNEIK-- 65

Query: 63  LRGDSNVS--YLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLR 120
             G  ++    +    +  + +  +   + G +Y    R    +D   +DQ   + + + 
Sbjct: 66  -SGKYDIEGCPIKSDALYEYVKSFENSDDQGFVYTYPNRILAHFD---VDQFEVMKKRML 121

Query: 121 ADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIAS 180
               S R +   ++  L       PC    Q  V N +L+     RS D+F     N+  
Sbjct: 122 HAIGSNRAVAVTYDPKLDQDREDIPCLQFLQCIVRNNELTIHCLFRSNDIFGAFYSNMFF 181

Query: 181 YSLLTMMLASVIGFQY-------GEFIHTLGDVHLYNNHFEQADLQL 220
            + + + +   +  +        G   +     H+Y+N  + A   +
Sbjct: 182 ITYIGIKMKEELNKELLGEKVNFGGIHYHSTSGHIYSNDMKAAKKLI 228


>gi|7670721|gb|AAF66223.1| thymidylate synthase [Felis catus]
          Length = 45

 Score = 66.4 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/45 (73%), Positives = 39/45 (86%)

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           LSCQLYQRSGD+ LG+PFNIASYSLLT M+A + G + G+FIHTL
Sbjct: 1   LSCQLYQRSGDMGLGVPFNIASYSLLTYMIAHITGLKPGDFIHTL 45


>gi|6644121|gb|AAF20914.1| thymidylate synthase [Equus caballus]
          Length = 44

 Score = 66.1 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/44 (68%), Positives = 38/44 (86%)

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHT 202
           LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G + G+F+HT
Sbjct: 1   LSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHT 44


>gi|148927227|ref|ZP_01810800.1| Thymidylate synthase-like protein [candidate division TM7 genomosp.
           GTL1]
 gi|147887358|gb|EDK72809.1| Thymidylate synthase-like protein [candidate division TM7 genomosp.
           GTL1]
          Length = 208

 Score = 65.3 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 48/127 (37%)

Query: 93  IYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQF 152
           I+      +         QI  ++  L          +S W+  +     + PC  +   
Sbjct: 78  IHDWTKLYYHRAFDEPNSQIEFLISKLDPQSPKGEAQISMWDKNIDQDQKVSPCTQIIWA 137

Query: 153 YVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNH 212
            + +GKL   ++  S DV+  +  NI  +  L   +A  +G   G++ H L   HL+   
Sbjct: 138 RIKHGKLELHVHAHSSDVYKKLLMNILEFVSLQHYIAERVGVPVGKYYHFLDSGHLHQKD 197

Query: 213 FEQADLQ 219
            +  ++ 
Sbjct: 198 IKAIEVL 204


>gi|288561361|ref|YP_003424847.1| thymidylate synthase ThyA [Methanobrevibacter ruminantium M1]
 gi|288544071|gb|ADC47955.1| thymidylate synthase ThyA [Methanobrevibacter ruminantium M1]
          Length = 236

 Score = 65.3 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 78/231 (33%), Gaps = 22/231 (9%)

Query: 4   YLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELLWF 62
           YL+ +  ++K G +    +    +   G     D           + +  + ++ E+   
Sbjct: 8   YLEFVNKILKEGKETYKDSDHHLKEYLGNYYYIDDPLDLKFRAKYQHMTPELMLEEIK-- 65

Query: 63  LRGDSNVSYLHRHGVSIWD-----EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQ 117
            +G  ++      G ++++     E  D  G +          +       +DQ   + +
Sbjct: 66  -KGRYDIDACPIKGDALYEYVKSFEIRDDQGFVYTYPNRILEHF------GVDQFEVMKE 118

Query: 118 SLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFN 177
            +     S R +   ++  L       PC    Q  V +G+L+  +  RS D+F     N
Sbjct: 119 RILTATGSNRAVAVTYDPKLDHDREDIPCLQFVQMLVRDGELTIHVIFRSNDIFGAFYSN 178

Query: 178 IASYSLLTMMLASVIGFQY-------GEFIHTLGDVHLYNNHFEQADLQLS 221
           +     + + +   +  +        G   +     H+YNN    A   +S
Sbjct: 179 MFFICYMGIKMKEEVNKEIMGEKLNFGGIHYHSTSGHIYNNDMRAARKLIS 229


>gi|7670725|gb|AAF66224.1| thymidylate synthase [Bos taurus]
          Length = 45

 Score = 65.3 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 38/45 (84%)

Query: 159 LSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTL 203
           LSCQLYQRSGD+ LG+PFNIASY+LLT M+A +   + G+F+HTL
Sbjct: 1   LSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTL 45


>gi|147921548|ref|YP_684635.1| putative thymidylate synthase [uncultured methanogenic archaeon
           RC-I]
 gi|110620031|emb|CAJ35309.1| putative thymidylate synthase [uncultured methanogenic archaeon
           RC-I]
          Length = 217

 Score = 64.5 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 9/151 (5%)

Query: 77  VSIWDEWADKD--GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADP-YSRRHIVSAW 133
           V  + E   ++  G+ G  Y    R     +    DQ+  + + L+     S+R     W
Sbjct: 70  VKYYVEQFKRESAGKHGFEYTYIDR---MVNYEGFDQLKWMAEQLKNKRYDSKRVQAITW 126

Query: 134 NV-ALIDKMALPPCHCLFQFY-VDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTM-MLAS 190
                  K    PC      Y   N  L   ++ RS D+F     N+ ++  L    L  
Sbjct: 127 IPRVDCAKKEDQPCFQRIWVYPYQNDTLDVHIHYRSWDMFKAFEANLMAFQELVKDELTG 186

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221
             GF  G+      +VH+Y + F+  +  L 
Sbjct: 187 PSGFTLGKLRCFGDNVHIYEDDFQAVEAVLK 217


>gi|297729145|ref|NP_001176936.1| Os12g0446900 [Oryza sativa Japonica Group]
 gi|255670280|dbj|BAH95664.1| Os12g0446900 [Oryza sativa Japonica Group]
          Length = 89

 Score = 64.1 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/44 (70%), Positives = 38/44 (86%)

Query: 151 QFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
           +FYV+NG+LSCQ+YQRS D+ LG+PFNIASYSLLT M+A V G 
Sbjct: 32  KFYVENGELSCQMYQRSADMGLGVPFNIASYSLLTCMIAQVCGM 75



 Score = 40.6 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 48 KKVHWKSVVHELLWFLRGDSNVSYLHRHG 76
          ++V W+ V+ ELLWF+ G +N  +   +G
Sbjct: 10 QRVFWRGVLEELLWFISGSTNAKFYVENG 38


>gi|282858321|ref|ZP_06267503.1| conserved domain protein [Prevotella bivia JCVIHMP010]
 gi|282588902|gb|EFB94025.1| conserved domain protein [Prevotella bivia JCVIHMP010]
          Length = 104

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
          M++Y  +L  ++K G  + ++ G         Q+    +    +  +  +  K + +EL 
Sbjct: 1  MNKYYQILDKILKQGKIQDNKKG-NIHYLLNEQLSLLPADLLDIFESHGIARKKLKNELQ 59

Query: 61 WFLRGDSNVSYLHRHGVSIWDEW 83
           F++G+ NV      G++ WD  
Sbjct: 60 LFMQGERNVERYREAGINWWDYC 82


>gi|158521756|ref|YP_001529626.1| thymidylate synthase-like protein [Desulfococcus oleovorans Hxd3]
 gi|158510582|gb|ABW67549.1| thymidylate synthase-like protein [Desulfococcus oleovorans Hxd3]
          Length = 263

 Score = 63.4 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 4/141 (2%)

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRA-DPYSRRH 128
           + L+   ++ W E A +  +     G     + +     I+QI  ++ + +     + + 
Sbjct: 112 APLYGDKLAWWHENASEIVDRREPDGKIV--FEEDGRLYINQIEWVIDTYKRFGARNNQM 169

Query: 129 IVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMML 188
           ++     + +  +  PPC       + + +L   +Y RS D++ G+P N+A    L   +
Sbjct: 170 VLQVAEPSDLALLD-PPCLRSIDTRIQDDQLIFFVYFRSWDLWGGLPANLAGIQNLKEYM 228

Query: 189 ASVIGFQYGEFIHTLGDVHLY 209
           A  IG   G  I     +HLY
Sbjct: 229 AGEIGVADGPMIVESKGLHLY 249


>gi|167948528|ref|ZP_02535602.1| thymidylate synthase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 31

 Score = 63.0 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 234 PNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           P + DL +FRYEDF L  Y+PH  I A V+V
Sbjct: 1   PEVRDLFAFRYEDFELLDYDPHPHIKAPVAV 31


>gi|152002543|dbj|BAF73567.1| thymidylate synthase [Onion yellows phytoplasma OY-W]
          Length = 58

 Score = 62.6 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 36/45 (80%)

Query: 128 HIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFL 172
            I+++WN  L+++MALPPCH L QFYV  GKLS QLYQRSGDVF 
Sbjct: 1   MILNSWNPPLLNQMALPPCHVLIQFYVHQGKLSLQLYQRSGDVFW 45


>gi|297611836|ref|NP_001067911.2| Os11g0484400 [Oryza sativa Japonica Group]
 gi|255680095|dbj|BAF28274.2| Os11g0484400 [Oryza sativa Japonica Group]
          Length = 77

 Score = 61.8 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/47 (68%), Positives = 39/47 (82%)

Query: 148 CLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGF 194
             FQFYV++G+LSCQ+YQRS D+ LG+PFNIASYSLLT M+A V G 
Sbjct: 17  FFFQFYVESGELSCQMYQRSADMGLGVPFNIASYSLLTYMIAHVCGM 63


>gi|2160415|dbj|BAA00404.1| thymidylate synthase [Homo sapiens]
          Length = 68

 Score = 61.4 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 3  QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS 39
          QYL  ++H+++ G  + DRTG GT S FG Q R+ L 
Sbjct: 32 QYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLR 68


>gi|328954285|ref|YP_004371619.1| hypothetical protein Desac_2621 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454609|gb|AEB10438.1| hypothetical protein Desac_2621 [Desulfobacca acetoxidans DSM
           11109]
          Length = 491

 Score = 61.4 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 7/152 (4%)

Query: 108 VIDQISSIVQSLRADPYSRRHIVSAW-NVALIDKMALPPCHCLFQFYVDNGKLSCQLYQR 166
             D + + ++ LRADP  R+  ++ W N   +      PC     F   + KL+     R
Sbjct: 293 GADNLKACLERLRADPEDRKAYLTLWDNNRDLINPKGQPCFVSSFFRRFDEKLTLTATFR 352

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPR- 225
           + +       N+     L   +A  +G   G        + +     ++A   + R P  
Sbjct: 353 THNALDAWLPNVYGLMALQQWVALRLGMPIGPITVVSHSISIDRKELDRALAVVGRRPFG 412

Query: 226 ----TLPQMIINPNIVDLL-SFRYEDFTLRSY 252
                     I+ +  ++L   RY D TL+ Y
Sbjct: 413 IREDPCGYFRISLDEGEILVEHRYGDVTLKEY 444


>gi|282163879|ref|YP_003356264.1| thymidylate synthase [Methanocella paludicola SANAE]
 gi|282156193|dbj|BAI61281.1| thymidylate synthase [Methanocella paludicola SANAE]
          Length = 212

 Score = 60.7 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 7/138 (5%)

Query: 88  GELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPY-SRRHIVSAWNVALID-KMALPP 145
           G  G  Y    R     +    DQ+  + + L+   Y S+R     W   +   K    P
Sbjct: 77  GRHGFEYTYIDR---LVNYEGFDQLKWMGEQLQNKRYESKRIQAITWMPKIDCMKKEDQP 133

Query: 146 CHCLFQFYVD-NGKLSCQLYQRSGDVFLGIPFNIASYSLLTM-MLASVIGFQYGEFIHTL 203
           C      +   N KL   ++ RS D+F     N+ ++  L    L     F  G      
Sbjct: 134 CFQRIWVFPHKNNKLDVHIHYRSWDMFKAFEANLMAFQELVKDELIGPTDFMLGTLRCFG 193

Query: 204 GDVHLYNNHFEQADLQLS 221
            +VH+Y + F+ A+  L 
Sbjct: 194 DNVHIYEDDFQAAEEVLK 211


>gi|108863585|gb|ABG22167.1| DHFR-TS [Haemoproteus lanii]
          Length = 73

 Score = 60.3 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         DY    +DQ+ +++  ++ DP SRR I+ AWN   
Sbjct: 11  EVNDLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPTSRRIILCAWNPKD 70

Query: 138 IDK 140
           ++K
Sbjct: 71  LEK 73


>gi|77407171|ref|ZP_00784156.1| thymidylate synthase [Streptococcus agalactiae H36B]
 gi|77174220|gb|EAO77104.1| thymidylate synthase [Streptococcus agalactiae H36B]
          Length = 134

 Score = 60.3 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 19/129 (14%)

Query: 6   DLLRHVIKFGSDRR-------DRTGVGTRSTFGYQMRFDLSKG-FPLLTTKKVHWKSVVH 57
           D +  ++  G           +     ++   G    +DLSKG FP+ T + +  KS + 
Sbjct: 10  DNITKIMSEGVFSEQARPRYKNGEMANSKYITGAFAEYDLSKGEFPITTLRPIPIKSAIK 69

Query: 58  ELLWFLRGDSN--VSYLHRHGVSIWDEWADKD-GELGPIYGVQWRSWPDYDGNVIDQISS 114
           E+ W  +  +N  V    ++GV+ W++W     G +G  YG   +          + IS 
Sbjct: 70  EIFWIYQDQTNDLVVLNDKYGVTYWNDWEVGHTGTIGQRYGAVVKKH--------NIISK 121

Query: 115 IVQSLRADP 123
           +++ L  +P
Sbjct: 122 LLKQLEDNP 130


>gi|49247552|gb|AAT58678.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. GRW2]
          Length = 78

 Score = 59.9 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         +YD   +DQ+ +I+  ++ DP SRR ++ AWNV  
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMYDNYDNKGVDQVKNIIDLIKNDPNSRRILLCAWNVKD 75

Query: 138 IDK 140
           +DK
Sbjct: 76  LDK 78


>gi|49247544|gb|AAT58674.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus majoris]
          Length = 78

 Score = 59.9 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         DY    +DQ+ +++  ++ DP +RR I+ AWN   
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKNDPKNRRIILCAWNPKD 75

Query: 138 IDK 140
           ++K
Sbjct: 76  LEK 78


>gi|271962366|ref|YP_003336562.1| hypothetical protein Sros_0805 [Streptosporangium roseum DSM 43021]
 gi|270505541|gb|ACZ83819.1| hypothetical protein Sros_0805 [Streptosporangium roseum DSM 43021]
          Length = 238

 Score = 59.9 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 70/224 (31%), Gaps = 36/224 (16%)

Query: 7   LLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGD 66
           L+RHV   G    D  G                   P++  + V ++  +  L W     
Sbjct: 17  LMRHVRTNGRAAEDDRG-------------------PIIEAQAVLFE--IAGLGW----- 50

Query: 67  SNVSYLHRHG----VSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRAD 122
            +   L  +G    + ++     +   + P             G  +DQ+  +   LRA 
Sbjct: 51  -DDPILESYGDSGKIPLYAGKFSECAIIPPFKYSYGGRLRRLLG--VDQLHWVADVLRAK 107

Query: 123 PYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYS 182
           PY++   +S             PC     F + +G+L      RS +VF     N     
Sbjct: 108 PYTKSGWISLTVPGESPDA--VPCLTSLAFRLRDGRLVMTAAFRSQNVFTSY-LNYVPLR 164

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
            +   +A  +G   G     +   H+Y          L  S R 
Sbjct: 165 SIQNEVAGDLGVGCGSMRVFVDVPHIYVADAAAVGEILRLSERD 208


>gi|123490938|ref|XP_001325718.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121908622|gb|EAY13495.1| hypothetical protein TVAG_343240 [Trichomonas vaginalis G3]
          Length = 478

 Score = 59.5 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 2/107 (1%)

Query: 112 ISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVF 171
           + + V+ L+ DP +R+  +S W    +     PPC     F +   +L    + RS D F
Sbjct: 280 LDATVKKLQTDPVTRQAHISLWLDQDV-SSPNPPCLTDIDFNLQKNRLFMTCHFRSHDAF 338

Query: 172 LGIPFNIASYSLLTMMLASVI-GFQYGEFIHTLGDVHLYNNHFEQAD 217
             +  N+     L   + S + G + G  +      H+Y    +   
Sbjct: 339 AALRSNMYGLVKLQEKVISQLPGVREGPLVLMANSSHIYERDIDTIK 385


>gi|49247528|gb|AAT58666.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           GRW1]
 gi|49247530|gb|AAT58667.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           GRW8]
 gi|49247532|gb|AAT58668.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           BRW1]
 gi|49247534|gb|AAT58669.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           GRW5]
          Length = 78

 Score = 59.1 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         DY    IDQ+ +++  ++ DP +RR I+ AWN   
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGIDQLKNVINLIKTDPTNRRIILCAWNPKD 75

Query: 138 IDK 140
           +DK
Sbjct: 76  LDK 78


>gi|108863583|gb|ABG22166.1| DHFR-TS [Haemoproteus lanii]
          Length = 73

 Score = 59.1 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         DY    +DQ+ +++  ++ DP SRR I+ AWN   
Sbjct: 11  EVNDLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPISRRIILCAWNPKD 70

Query: 138 IDK 140
           ++K
Sbjct: 71  LEK 73


>gi|110006193|gb|ABG48599.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PA]
          Length = 78

 Score = 58.7 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 8/66 (12%)

Query: 83  WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           +  +  +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ DP SRR I+ AWN
Sbjct: 13  FHREVNDLGPIYGFQWRHFGAEYSDMYDNYENKGIDQLKNIINLIKNDPTSRRIILCAWN 72

Query: 135 VALIDK 140
           V  +DK
Sbjct: 73  VKDLDK 78


>gi|291457829|ref|ZP_06597219.1| thymidylate synthase [Bifidobacterium breve DSM 20213]
 gi|291380554|gb|EFE88072.1| thymidylate synthase [Bifidobacterium breve DSM 20213]
          Length = 41

 Score = 58.7 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 113 SSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCL 149
             ++  ++ +P  RR I+SAWN + + KMALPPCH  
Sbjct: 1   MDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMC 37


>gi|49247538|gb|AAT58671.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT16]
 gi|49247540|gb|AAT58672.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT7]
          Length = 73

 Score = 58.7 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         DY    +DQ+ +++  L+ DP +RR I+ AWN   
Sbjct: 11  EVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVINLLKTDPTNRRIILCAWNPKD 70

Query: 138 IDK 140
           ++K
Sbjct: 71  LEK 73


>gi|49247536|gb|AAT58670.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT2]
 gi|49247542|gb|AAT58673.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT1]
 gi|86795021|gb|ABD15365.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT13]
 gi|86795023|gb|ABD15366.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT10]
          Length = 73

 Score = 58.7 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         DY    +DQ+ +++  ++ DP +RR I+ AWN   
Sbjct: 11  EVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVINLIKTDPTNRRIILCAWNPKD 70

Query: 138 IDK 140
           ++K
Sbjct: 71  LEK 73


>gi|110006229|gb|ABG48617.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT]
 gi|110006231|gb|ABG48618.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU]
 gi|112293883|gb|ABI15067.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT]
 gi|112293885|gb|ABI15068.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pT]
 gi|112293887|gb|ABI15069.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU]
 gi|112293889|gb|ABI15070.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pU]
          Length = 78

 Score = 58.4 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+SAWNV  
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILSAWNVKD 75

Query: 138 IDK 140
           +DK
Sbjct: 76  LDK 78


>gi|110006195|gb|ABG48600.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|110006197|gb|ABG48601.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PC]
 gi|112293821|gb|ABI15036.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293823|gb|ABI15037.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293825|gb|ABI15038.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293827|gb|ABI15039.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293829|gb|ABI15040.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293831|gb|ABI15041.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293833|gb|ABI15042.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
 gi|112293835|gb|ABI15043.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PB]
          Length = 78

 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 8/66 (12%)

Query: 83  WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           +  +  +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ DP SRR I+ AWN
Sbjct: 13  FHREVNDLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNDPTSRRIILCAWN 72

Query: 135 VALIDK 140
           V  +D+
Sbjct: 73  VKDLDQ 78


>gi|474095|emb|CAA83575.1| thymidylate synthase [Mycoplasma pneumoniae]
          Length = 50

 Score = 58.0 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/41 (80%), Positives = 38/41 (92%)

Query: 139 DKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIA 179
           D+M LPPCH L+QFYV +G+LSCQLYQRSGD+FLGIPFNIA
Sbjct: 1   DQMLLPPCHSLYQFYVQDGQLSCQLYQRSGDIFLGIPFNIA 41


>gi|110006199|gb|ABG48602.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pD]
 gi|110006201|gb|ABG48603.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pE]
 gi|112293837|gb|ABI15044.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pD]
          Length = 78

 Score = 58.0 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 8/66 (12%)

Query: 83  WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           +  +  +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+ AWN
Sbjct: 13  FHREVNDLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNEPTSRRIILCAWN 72

Query: 135 VALIDK 140
           V  +DK
Sbjct: 73  VKDLDK 78


>gi|110006233|gb|ABG48619.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pV]
          Length = 78

 Score = 58.0 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKD 75

Query: 138 IDK 140
           +DK
Sbjct: 76  LDK 78


>gi|110006225|gb|ABG48615.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR]
 gi|112293879|gb|ABI15065.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR]
 gi|112293881|gb|ABI15066.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PR]
          Length = 78

 Score = 58.0 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         +Y+   +DQ+ +I+  ++ +P SRR I+ AWNV  
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKD 75

Query: 138 IDK 140
           +DK
Sbjct: 76  LDK 78


>gi|110006227|gb|ABG48616.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pS]
          Length = 78

 Score = 58.0 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         +Y+   +DQ+ +I+  ++ +P SRR I+ AWNV  
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKD 75

Query: 138 IDK 140
           +DK
Sbjct: 76  LDK 78


>gi|110006211|gb|ABG48608.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pJ]
          Length = 78

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKD 75

Query: 138 IDK 140
           +D+
Sbjct: 76  LDQ 78


>gi|108863587|gb|ABG22168.1| DHFR-TS [Haemoproteus lanii]
          Length = 70

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 8/60 (13%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         DY    +DQ+ +++  ++ DP SRR I+ AWN   
Sbjct: 11  EVNDLGPIYGFQWRHFGAEYTNMHDDYTNKGVDQLKNVINLIKTDPTSRRIILCAWNPKD 70


>gi|168804053|ref|YP_001686984.1| thymidylate synthase [Glossina pallidipes salivary gland
          hypertrophy virus]
 gi|146164240|gb|ABQ08809.1| thymidylate synthase [Glossina pallidipes salivary gland
          hypertrophy virus]
          Length = 115

 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 6/75 (8%)

Query: 2  HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS-KGFPLLTTKKVHWKSVVHELL 60
          ++Y  L+ ++I+ G     +      S FG Q+ +DL  K FPL  +K+  W  V+ ELL
Sbjct: 21 NKYPTLVNNIIEHGISTEKK-----ISVFGAQLEYDLRNKKFPLFISKRYDWAYVIEELL 75

Query: 61 WFLRGDSNVSYLHRH 75
          W +RG+++   ++  
Sbjct: 76 WCIRGETDRKNINSR 90


>gi|110006203|gb|ABG48604.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pF]
          Length = 78

 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 8/66 (12%)

Query: 83  WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           +  +  +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+ AWN
Sbjct: 13  FHREVNDLGPIYGFQWRHFGAEYTDMYDNYENKGIDQLKNIINLIKNEPTSRRIILCAWN 72

Query: 135 VALIDK 140
           V  +D+
Sbjct: 73  VKDLDQ 78


>gi|110006205|gb|ABG48605.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum]
 gi|110006207|gb|ABG48606.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PH]
 gi|110006209|gb|ABG48607.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. PI]
 gi|110006213|gb|ABG48609.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pK]
 gi|110006215|gb|ABG48610.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pL]
 gi|110006217|gb|ABG48611.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM]
 gi|110006219|gb|ABG48612.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN]
 gi|112293839|gb|ABI15045.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293841|gb|ABI15046.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293843|gb|ABI15047.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293845|gb|ABI15048.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293847|gb|ABI15049.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293849|gb|ABI15050.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293851|gb|ABI15051.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum]
 gi|112293853|gb|ABI15052.1| dihydrofolate reductase/thymidylate synthase [Plasmodium relictum]
 gi|112293855|gb|ABI15053.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293857|gb|ABI15054.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293859|gb|ABI15055.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293861|gb|ABI15056.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293863|gb|ABI15057.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293865|gb|ABI15058.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293867|gb|ABI15059.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293869|gb|ABI15060.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pG]
 gi|112293871|gb|ABI15061.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM]
 gi|112293873|gb|ABI15062.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pM]
 gi|112293875|gb|ABI15063.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN]
 gi|112293877|gb|ABI15064.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pN]
          Length = 78

 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKD 75

Query: 138 IDK 140
           +D+
Sbjct: 76  LDQ 78


>gi|227431937|ref|ZP_03913958.1| possible thymidylate synthase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352306|gb|EEJ42511.1| possible thymidylate synthase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 168

 Score = 57.2 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 32/61 (52%)

Query: 161 CQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
             +Y R+ D F G+  +I S++ +   +A  +  + G++ H++G +H+Y    +     L
Sbjct: 1   MVVYMRANDAFRGMVSDIFSFTFIQEFMARELNLKVGKYYHSMGTMHIYEPDNQWVKHVL 60

Query: 221 S 221
           +
Sbjct: 61  N 61


>gi|49247548|gb|AAT58676.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp. WW1]
          Length = 78

 Score = 57.2 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 8/66 (12%)

Query: 83  WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           +  +  +LGPIYG QWR +         DY    +DQ+ ++++ ++ DP +RR I+ AWN
Sbjct: 13  YDREVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIILCAWN 72

Query: 135 VALIDK 140
              ++K
Sbjct: 73  PKDLEK 78


>gi|110006221|gb|ABG48613.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pO]
          Length = 78

 Score = 57.2 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         +Y+   +DQ+ +I+  ++ +P SRR I+ AWNV  
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRIILCAWNVKD 75

Query: 138 IDK 140
           +D+
Sbjct: 76  LDQ 78


>gi|49247550|gb|AAT58677.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. SGS1]
          Length = 73

 Score = 56.8 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         +Y+   IDQ+ +I+  ++ +P SRR I+ AWNV  
Sbjct: 11  EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGIDQLKNIINLIKNEPTSRRIILCAWNVKD 70

Query: 138 IDK 140
           +D+
Sbjct: 71  LDQ 73


>gi|49247546|gb|AAT58675.1| dihydrofolate reductase/thymidylate synthase [Haemoproteus sp.
           SYAT3]
 gi|108863577|gb|ABG22163.1| DHFR-TS [Haemoproteus minutus]
          Length = 73

 Score = 56.8 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 8/66 (12%)

Query: 83  WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           +  +  +LGPIYG QWR +         DY    +DQ+ ++++ ++ DP +RR I+ AWN
Sbjct: 8   YDREVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIILCAWN 67

Query: 135 VALIDK 140
              ++K
Sbjct: 68  PKDLEK 73


>gi|108863579|gb|ABG22164.1| DHFR-TS [Haemoproteus pallidus]
 gi|108863581|gb|ABG22165.1| DHFR-TS [Haemoproteus pallidus]
          Length = 73

 Score = 56.8 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 8/66 (12%)

Query: 83  WADKDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWN 134
           +  +  +LGPIYG QWR +         DY    +DQ+ ++++ ++ DP +RR I+ AWN
Sbjct: 8   YDREVNDLGPIYGFQWRHFGAEYTNMHDDYTDKGVDQLKNVIRLIQNDPTNRRIIICAWN 67

Query: 135 VALIDK 140
              ++K
Sbjct: 68  PKDLEK 73


>gi|110006223|gb|ABG48614.1| dihydrofolate reductase/thymidylate synthase [Plasmodium sp. pP]
          Length = 78

 Score = 56.8 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 8/63 (12%)

Query: 86  KDGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVAL 137
           +  +LGPIYG QWR +         +Y+   +DQ+ +I+  ++ +P SRR ++ AWNV  
Sbjct: 16  EVNDLGPIYGFQWRHFGAEYTNMHDNYENKGVDQLKNIINLIKNEPTSRRILLCAWNVKD 75

Query: 138 IDK 140
           +D+
Sbjct: 76  LDQ 78


>gi|172992|gb|AAA35159.1| thymidylate synthase [Saccharomyces cerevisiae]
          Length = 38

 Score = 56.4 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 2  HQYLDLLRHVIKFGSDRRDRTGVGTRST 29
           QYLDL + +I  G  R DRTG GT S 
Sbjct: 11 EQYLDLCKRIIDEGEFRPDRTGTGTLSL 38


>gi|157362353|dbj|BAF80312.1| thymidylate synthase [Macaca mulatta]
          Length = 68

 Score = 56.0 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 3  QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLS 39
          QYL  + H+++ G  + D TG GT S +G Q R+ L 
Sbjct: 32 QYLGQIEHILRCGVRKDDGTGTGTLSVYGMQARYSLR 68


>gi|6573117|gb|AAF17556.1|AF201743_1 thymidylate synthase [Canis lupus familiaris]
          Length = 38

 Score = 56.0 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/38 (68%), Positives = 33/38 (86%)

Query: 158 KLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQ 195
           +LSCQLYQRSGD+ LG+PFNIASY+LLT M+A + G +
Sbjct: 1   ELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 38


>gi|298530528|ref|ZP_07017930.1| thymidylate synthase-like protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509902|gb|EFI33806.1| thymidylate synthase-like protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 224

 Score = 55.7 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%)

Query: 136 ALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVI-GF 194
                +  PPC       + +G+L    Y RS D++ G P N+A  ++L   +A  I G 
Sbjct: 133 PEDHLLNDPPCLRHIDMRIRDGRLIFYPYFRSWDLWGGFPANLAGIAVLQKYMADSIEGV 192

Query: 195 QYGEFIHTLGDVHLYNNHFEQADLQLSRSPRT 226
             G  + +   +H+Y    E A ++  R    
Sbjct: 193 SPGPILASSKGLHIYGYAEELARIRTCRKDAP 224


>gi|329847890|ref|ZP_08262918.1| thymidylate synthase protein [Asticcacaulis biprosthecum C19]
 gi|328842953|gb|EGF92522.1| thymidylate synthase protein [Asticcacaulis biprosthecum C19]
          Length = 166

 Score = 54.9 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 32/56 (57%)

Query: 165 QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQL 220
            RS D +LG+P +I  +++L  ++A  +  + G + H++G +HLY  +   A   L
Sbjct: 1   MRSNDAYLGLPHDIFCFTMLQELIAGSLSAKLGTYKHSVGSLHLYTENAIAAQEFL 56


>gi|190702141|gb|ACE75860.1| putative thymidylate synthase-like protein [uncultured virus]
          Length = 59

 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 5/63 (7%)

Query: 81  DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDK 140
           +    + G+LGP+YG QWR++     N +DQI  ++  ++ +P+    +V++WNV+ + K
Sbjct: 2   NASKIRLGDLGPVYGHQWRNF-----NGVDQIQQLINKIQDNPFRTDLMVNSWNVSDLPK 56

Query: 141 MAL 143
           MAL
Sbjct: 57  MAL 59


>gi|169841694|ref|ZP_02874803.1| thymidylate synthase [candidate division TM7 single-cell isolate
          TM7a]
          Length = 60

 Score = 53.3 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 34/43 (79%)

Query: 45 LTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKD 87
          +TTKK+++ SV HELLWFL+G  N+ YL ++GV IWDEW  K+
Sbjct: 1  MTTKKLYFNSVAHELLWFLKGTGNIEYLAQNGVHIWDEWPYKN 43


>gi|152002541|dbj|BAF73565.1| thymidylate synthase [Onion yellows phytoplasma OY-W]
          Length = 55

 Score = 52.6 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/41 (53%), Positives = 36/41 (87%)

Query: 44 LLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWA 84
          +LTTKK++ +S++HELLWFL+GD+N+ Y+ ++ V+IW+EW 
Sbjct: 1  MLTTKKMNLRSIIHELLWFLKGDTNICYVVQNNVNIWNEWP 41


>gi|168804052|ref|YP_001686983.1| thymidylate synthase-like protein [Glossina pallidipes salivary
           gland hypertrophy virus]
 gi|146164239|gb|ABQ08808.1| thymidylate synthase-like protein [Glossina pallidipes salivary
           gland hypertrophy virus]
          Length = 87

 Score = 51.4 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 34/79 (43%)

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINP 234
           P  IA YSLLT M+A V         +T+G  ++     +             P++I+  
Sbjct: 6   PLTIAKYSLLTYMIAYVCNLMPYSITYTMGVSYINKYELDILQSYTKMKQYKFPRLIVEH 65

Query: 235 NIVDLLSFRYEDFTLRSYE 253
            + D+ SF   +F L  Y+
Sbjct: 66  YVKDIYSFNLGNFLLYDYQ 84


>gi|899339|emb|CAA32651.1| thymidylate synthase (exons 5-7) [Mus musculus]
          Length = 30

 Score = 49.5 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/30 (56%), Positives = 21/30 (70%)

Query: 193 GFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222
           G Q G+F+HTLGD H+Y NH E   +QL R
Sbjct: 1   GLQPGDFVHTLGDAHIYLNHIEPLKIQLQR 30


>gi|270619619|ref|ZP_06221821.1| thymidylate synthase [Haemophilus influenzae HK1212]
 gi|270317825|gb|EFA29182.1| thymidylate synthase [Haemophilus influenzae HK1212]
          Length = 33

 Score = 48.3 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)

Query: 1  MHQYLDLLRHVIKFGS-DRRDRTGVGTRSTFGY 32
          M QYLDL R ++  G     +RTG    S    
Sbjct: 1  MKQYLDLCRRIVNEGEWVANERTGKHCLSVINA 33


>gi|297204894|ref|ZP_06922291.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197711667|gb|EDY55701.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 267

 Score = 47.6 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 20/162 (12%)

Query: 67  SNVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSR 126
           ++ + L     +++       G     Y  +  ++P      IDQI +I+  LR    S+
Sbjct: 87  TDHASLVARYRAMYLRIKRYPGNAHGTYFGRLVAYPGAKKTDIDQIGNIIGRLRKQAGSK 146

Query: 127 RHIVSAW-----NVALIDKMAL--------------PPCHCLFQFYVD-NGKLSCQLYQR 166
             + +A+     + A  D  A                PC     F +D + ++      R
Sbjct: 147 GPMTAAYEADLAHPADGDVPAELLVHAADRDNLYRGFPCLSHVSFQLDRDRRVHAAALYR 206

Query: 167 SGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           S  +F     N      L   +++  G   G      G  HL
Sbjct: 207 SQYMFERAYGNYLGLGRLLAYISAQAGLAVGTLTVVAGHAHL 248


>gi|289466138|gb|ADC94836.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
          Length = 347

 Score = 46.8 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/31 (45%), Positives = 22/31 (70%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY 32
           +QYL+++  ++  G+ + DRTGVG  S FGY
Sbjct: 316 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGY 346


>gi|289466132|gb|ADC94833.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
 gi|289466136|gb|ADC94835.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
          Length = 347

 Score = 46.8 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/31 (45%), Positives = 22/31 (70%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY 32
           +QYL+++  ++  G+ + DRTGVG  S FGY
Sbjct: 316 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGY 346


>gi|289466134|gb|ADC94834.1| dihydrofolate reductase-thymidylate synthase [Plasmodium
           falciparum]
          Length = 347

 Score = 46.8 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/31 (45%), Positives = 22/31 (70%)

Query: 2   HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGY 32
           +QYL+++  ++  G+ + DRTGVG  S FGY
Sbjct: 316 YQYLNIIYDIMMNGNKQSDRTGVGVLSKFGY 346


>gi|330891850|gb|EGH24511.1| thymidylate synthase [Pseudomonas syringae pv. mori str. 301020]
          Length = 24

 Score = 44.1 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 242 FRYEDFTLRSYEPHAAILAKVSV 264
               DFTL  Y+ H A+ A ++V
Sbjct: 2   IEPSDFTLEGYQHHPAMTAPMAV 24


>gi|29826760|ref|NP_821394.1| hypothetical protein SAV_220 [Streptomyces avermitilis MA-4680]
 gi|29603856|dbj|BAC67929.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 267

 Score = 42.2 bits (98), Expect = 0.084,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 26/219 (11%)

Query: 16  SDRRDRTGVGTRSTFGYQMRFDL---SKGFPLLTTKKVHWKSVVHELLW---FLRGDSNV 69
            D  DRTG+ T          D    ++   L T + +     V   L+        ++ 
Sbjct: 30  KDNPDRTGLHTVVRIADPTSDDPVFRAELDRLRTARGLWPLETVASTLFPAALAARSADP 89

Query: 70  SYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHI 129
             L      ++       G     Y  +   +P      IDQ+S+++  LR      +  
Sbjct: 90  DDLAERYRRMYPVIKRYPGNHRGTYFGRLVFYPAASKTGIDQLSTVISRLRTQAAGTKIA 149

Query: 130 VSA-------------------WNVALIDKMALPPCHCLFQFYVD-NGKLSCQLYQRSGD 169
            +                          +     PC       +D + ++      RS  
Sbjct: 150 AAYEIDIAAATDQEEAGADLLVHTAGKDNSYIGFPCLSHISLQLDRDRRVHAAALYRSHF 209

Query: 170 VFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHL 208
           +F     N      L   +A       G      G   L
Sbjct: 210 MFERAYGNYLGLGRLLAYIAQQAELACGTLTVMAGHARL 248


>gi|509022|gb|AAA32525.1| td [Enterobacteria phage T4]
          Length = 36

 Score = 41.4 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 230 MIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
           +     +  +L  R +DF L +Y  H  I  K++V
Sbjct: 2   LSTKEQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 36


>gi|254232622|ref|ZP_04925949.1| hypothetical protein TBCG_02432 [Mycobacterium tuberculosis C]
 gi|124601681|gb|EAY60691.1| hypothetical protein TBCG_02432 [Mycobacterium tuberculosis C]
          Length = 253

 Score = 40.3 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 17/159 (10%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N + L      I++    +D ++   +    +S+          I  +++ L   P S++
Sbjct: 71  NSAQLKAMLDFIFNTDTMEDIDVVKSFSRGAKSYHRRIKEGR-MIEFVIERLSLIPESKK 129

Query: 128 HIVSAWNVALI------DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFN 177
            +V               +    PC    QF +     +       Y RS D +     N
Sbjct: 130 AVVVFPTYEDYAAVMRNHRDDYLPCLVSIQFRLLPDGKDYVFHTTFYSRSMDAWQKGHGN 189

Query: 178 IASYSLLTMMLASVIGFQYGEFIH------TLGDVHLYN 210
           + S + L+  +   +  + G  I        + DVH+Y 
Sbjct: 190 LLSIAKLSDWVRENVSARIGRKIMLGPLDGMICDVHIYK 228


>gi|22796918|emb|CAA31422.1| thymidylate synthase [Mus musculus]
          Length = 24

 Score = 39.9 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/24 (54%), Positives = 17/24 (70%)

Query: 196 YGEFIHTLGDVHLYNNHFEQADLQ 219
            G+F+HTLGD H+Y NH E   +Q
Sbjct: 1   PGDFVHTLGDAHIYLNHIEPLKIQ 24


>gi|260463676|ref|ZP_05811874.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
 gi|319785163|ref|YP_004144639.1| hypothetical protein Mesci_5492 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|259030530|gb|EEW31808.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
 gi|317171051|gb|ADV14589.1| hypothetical protein Mesci_5492 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 258

 Score = 39.9 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 58/157 (36%), Gaps = 17/157 (10%)

Query: 69  VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNV---IDQISSIVQSLRADPYS 125
           +  L +  + +++    + GE G  Y  +  +WP+  G     ++Q+S+ +++LRA    
Sbjct: 82  IDALTKRYMQVYERRMHRQGEWG-RYFQRMVAWPNGGGRGAGTVNQLSANIETLRAMRSG 140

Query: 126 RRHIV------SAWNVA-LIDKMALPPCHCLFQFYVDNG----KLSCQLYQRSGDVFLGI 174
                      + ++ A  + K     C    +   +      +LS     R+       
Sbjct: 141 EAKFFGNVTEIALFDPARDLRKKMNRQCLSFIELKPERQGNIWRLSMMAVYRNHYYVQRT 200

Query: 175 PFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNN 211
             N+     L   +A+  GF+ G    T+   H   +
Sbjct: 201 LGNLIGLGRLLQFIANETGFEIGTL--TIQSTHACLD 235


>gi|322639438|gb|EFY36126.1| hypothetical protein SEEM954_11367 [Salmonella enterica subsp.
          enterica serovar Montevideo str. 531954]
          Length = 44

 Score = 39.5 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 9/52 (17%)

Query: 1  MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHW 52
          M QYL+L++ V+  G+ +         +T     RF       +LT +K   
Sbjct: 1  MKQYLELMQKVLDEGTQK---------TTVPAPARFPFLAIRCVLTCRKAFL 43


>gi|15609629|ref|NP_217008.1| hypothetical protein Rv2492 [Mycobacterium tuberculosis H37Rv]
 gi|15842020|ref|NP_337057.1| hypothetical protein MT2567 [Mycobacterium tuberculosis CDC1551]
 gi|148662328|ref|YP_001283851.1| hypothetical protein MRA_2518 [Mycobacterium tuberculosis H37Ra]
 gi|148823690|ref|YP_001288444.1| hypothetical protein TBFG_12515 [Mycobacterium tuberculosis F11]
 gi|167967638|ref|ZP_02549915.1| hypothetical protein MtubH3_06216 [Mycobacterium tuberculosis
           H37Ra]
 gi|254366797|ref|ZP_04982839.1| hypothetical protein TBHG_02430 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551539|ref|ZP_05141986.1| hypothetical protein Mtube_13960 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|289762660|ref|ZP_06522038.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|306776765|ref|ZP_07415102.1| hypothetical protein TMAG_02294 [Mycobacterium tuberculosis
           SUMu001]
 gi|306780532|ref|ZP_07418869.1| hypothetical protein TMBG_01031 [Mycobacterium tuberculosis
           SUMu002]
 gi|306789646|ref|ZP_07427968.1| hypothetical protein TMDG_04000 [Mycobacterium tuberculosis
           SUMu004]
 gi|306972876|ref|ZP_07485537.1| hypothetical protein TMJG_01470 [Mycobacterium tuberculosis
           SUMu010]
 gi|307080590|ref|ZP_07489760.1| hypothetical protein TMKG_02919 [Mycobacterium tuberculosis
           SUMu011]
 gi|2791532|emb|CAA16069.1| HYPOTHETICAL PROTEIN Rv2492 [Mycobacterium tuberculosis H37Rv]
 gi|13882297|gb|AAK46871.1| hypothetical protein MT2567 [Mycobacterium tuberculosis CDC1551]
 gi|134152307|gb|EBA44352.1| hypothetical protein TBHG_02430 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506480|gb|ABQ74289.1| hypothetical protein MRA_2518 [Mycobacterium tuberculosis H37Ra]
 gi|148722217|gb|ABR06842.1| hypothetical protein TBFG_12515 [Mycobacterium tuberculosis F11]
 gi|289710166|gb|EFD74182.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|308214826|gb|EFO74225.1| hypothetical protein TMAG_02294 [Mycobacterium tuberculosis
           SUMu001]
 gi|308326598|gb|EFP15449.1| hypothetical protein TMBG_01031 [Mycobacterium tuberculosis
           SUMu002]
 gi|308333863|gb|EFP22714.1| hypothetical protein TMDG_04000 [Mycobacterium tuberculosis
           SUMu004]
 gi|308357703|gb|EFP46554.1| hypothetical protein TMJG_01470 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361644|gb|EFP50495.1| hypothetical protein TMKG_02919 [Mycobacterium tuberculosis
           SUMu011]
          Length = 250

 Score = 39.5 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 17/159 (10%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N + L      +++    +D ++   +    +S+          I  +++ L   P S++
Sbjct: 68  NSAQLKAMLDFMFNTDTMEDIDVVKSFSRGAKSYHRRIKEGR-MIEFVIERLSLIPESKK 126

Query: 128 HIVSAWNVALI------DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFN 177
            +V               +    PC    QF +     +       Y RS D +     N
Sbjct: 127 AVVVFPTYEDYAAVMRNHRDDYLPCLVSIQFRLLPDGKDYVFHTTFYSRSMDAWQKGHGN 186

Query: 178 IASYSLLTMMLASVIGFQYGEFIH------TLGDVHLYN 210
           + S + L+  +   +  + G  I        + DVH+Y 
Sbjct: 187 LLSIAKLSDWVRENVSARIGRKIMLGPLDGMICDVHIYK 225


>gi|218754224|ref|ZP_03533020.1| hypothetical protein MtubG1_12679 [Mycobacterium tuberculosis GM
           1503]
 gi|308371032|ref|ZP_07423614.2| hypothetical protein TMCG_03976 [Mycobacterium tuberculosis
           SUMu003]
 gi|308373431|ref|ZP_07432275.2| hypothetical protein TMEG_03165 [Mycobacterium tuberculosis
           SUMu005]
 gi|308374596|ref|ZP_07436670.2| hypothetical protein TMFG_03715 [Mycobacterium tuberculosis
           SUMu006]
 gi|308375570|ref|ZP_07444379.2| hypothetical protein TMGG_02383 [Mycobacterium tuberculosis
           SUMu007]
 gi|308377031|ref|ZP_07440916.2| hypothetical protein TMHG_01684 [Mycobacterium tuberculosis
           SUMu008]
 gi|308378029|ref|ZP_07481305.2| hypothetical protein TMIG_04037 [Mycobacterium tuberculosis
           SUMu009]
 gi|308330020|gb|EFP18871.1| hypothetical protein TMCG_03976 [Mycobacterium tuberculosis
           SUMu003]
 gi|308337663|gb|EFP26514.1| hypothetical protein TMEG_03165 [Mycobacterium tuberculosis
           SUMu005]
 gi|308341344|gb|EFP30195.1| hypothetical protein TMFG_03715 [Mycobacterium tuberculosis
           SUMu006]
 gi|308345899|gb|EFP34750.1| hypothetical protein TMGG_02383 [Mycobacterium tuberculosis
           SUMu007]
 gi|308349136|gb|EFP37987.1| hypothetical protein TMHG_01684 [Mycobacterium tuberculosis
           SUMu008]
 gi|308353760|gb|EFP42611.1| hypothetical protein TMIG_04037 [Mycobacterium tuberculosis
           SUMu009]
 gi|323718900|gb|EGB28054.1| hypothetical protein TMMG_02499 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 253

 Score = 39.5 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 17/159 (10%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N + L      +++    +D ++   +    +S+          I  +++ L   P S++
Sbjct: 71  NSAQLKAMLDFMFNTDTMEDIDVVKSFSRGAKSYHRRIKEGR-MIEFVIERLSLIPESKK 129

Query: 128 HIVSAWNVALI------DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFN 177
            +V               +    PC    QF +     +       Y RS D +     N
Sbjct: 130 AVVVFPTYEDYAAVMRNHRDDYLPCLVSIQFRLLPDGKDYVFHTTFYSRSMDAWQKGHGN 189

Query: 178 IASYSLLTMMLASVIGFQYGEFIH------TLGDVHLYN 210
           + S + L+  +   +  + G  I        + DVH+Y 
Sbjct: 190 LLSIAKLSDWVRENVSARIGRKIMLGPLDGMICDVHIYK 228


>gi|31793672|ref|NP_856165.1| hypothetical protein Mb2520 [Mycobacterium bovis AF2122/97]
 gi|121638374|ref|YP_978598.1| hypothetical protein BCG_2512 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224990868|ref|YP_002645555.1| hypothetical protein JTY_2506 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|260187499|ref|ZP_05764973.1| hypothetical protein MtubCP_15917 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260205807|ref|ZP_05773298.1| hypothetical protein MtubK8_16071 [Mycobacterium tuberculosis K85]
 gi|289448137|ref|ZP_06437881.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289575197|ref|ZP_06455424.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746274|ref|ZP_06505652.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751101|ref|ZP_06510479.1| hypothetical protein TBDG_04112 [Mycobacterium tuberculosis T92]
 gi|289754602|ref|ZP_06513980.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|294994400|ref|ZP_06800091.1| hypothetical protein Mtub2_07758 [Mycobacterium tuberculosis 210]
 gi|298525965|ref|ZP_07013374.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|31619265|emb|CAD97381.1| HYPOTHETICAL PROTEIN Mb2520 [Mycobacterium bovis AF2122/97]
 gi|121494022|emb|CAL72500.1| Hypothetical protein BCG_2512 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224773981|dbj|BAH26787.1| hypothetical protein JTY_2506 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|289421095|gb|EFD18296.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289539628|gb|EFD44206.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289686802|gb|EFD54290.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691688|gb|EFD59117.1| hypothetical protein TBDG_04112 [Mycobacterium tuberculosis T92]
 gi|289695189|gb|EFD62618.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|298495759|gb|EFI31053.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|326904106|gb|EGE51039.1| hypothetical protein TBPG_01999 [Mycobacterium tuberculosis W-148]
          Length = 250

 Score = 39.5 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 53/159 (33%), Gaps = 17/159 (10%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N   L      +++    +D ++   +    +S+          I  +++ L   P S++
Sbjct: 68  NSDQLKAMLDFMFNTDTMEDIDVVKSFSRGAKSYHRRIKEGR-MIEFVIERLSLIPESKK 126

Query: 128 HIVSAWNVALI------DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFN 177
            +V               +    PC    QF +     +       Y RS D +     N
Sbjct: 127 AVVVFPTYEDYAAVMRNHRDDYLPCLVSIQFRLLPDGKDYVFHTTFYSRSMDAWQKGHGN 186

Query: 178 IASYSLLTMMLASVIGFQYGEFIH------TLGDVHLYN 210
           + S + L+  +   +  + G  I        + DVH+Y 
Sbjct: 187 LLSIAKLSDWVRENVSARIGRKIMLGPLDGMICDVHIYK 225


>gi|215404428|ref|ZP_03416609.1| hypothetical protein Mtub0_12246 [Mycobacterium tuberculosis
           02_1987]
 gi|215412258|ref|ZP_03421018.1| hypothetical protein Mtub9_13013 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427875|ref|ZP_03425794.1| hypothetical protein MtubT9_16423 [Mycobacterium tuberculosis T92]
 gi|215431438|ref|ZP_03429357.1| hypothetical protein MtubE_12329 [Mycobacterium tuberculosis
           EAS054]
          Length = 253

 Score = 39.5 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 53/159 (33%), Gaps = 17/159 (10%)

Query: 68  NVSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRR 127
           N   L      +++    +D ++   +    +S+          I  +++ L   P S++
Sbjct: 71  NSDQLKAMLDFMFNTDTMEDIDVVKSFSRGAKSYHRRIKEGR-MIEFVIERLSLIPESKK 129

Query: 128 HIVSAWNVALI------DKMALPPCHCLFQFYV----DNGKLSCQLYQRSGDVFLGIPFN 177
            +V               +    PC    QF +     +       Y RS D +     N
Sbjct: 130 AVVVFPTYEDYAAVMRNHRDDYLPCLVSIQFRLLPDGKDYVFHTTFYSRSMDAWQKGHGN 189

Query: 178 IASYSLLTMMLASVIGFQYGEFIH------TLGDVHLYN 210
           + S + L+  +   +  + G  I        + DVH+Y 
Sbjct: 190 LLSIAKLSDWVRENVSARIGRKIMLGPLDGMICDVHIYK 228


>gi|238917544|ref|YP_002931061.1| phosphomannomutase [Eubacterium eligens ATCC 27750]
 gi|238872904|gb|ACR72614.1| phosphomannomutase [Eubacterium eligens ATCC 27750]
          Length = 575

 Score = 38.3 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 69  VSYLHRHGVSIWDEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRH 128
            +Y    G+++WD+  +   + G     Q ++          QI+ ++  LR +P  +  
Sbjct: 431 AAYYKSKGITLWDQMINIFDKYGYFKEGQ-KAVTMKGAEGAVQIAKMMDDLRNNPPKK-- 487

Query: 129 IVSAWNVALIDKMALPPCHC 148
              AWNV          C  
Sbjct: 488 -FGAWNVVEFRDYKKDECTV 506


>gi|322805079|emb|CBZ02639.1| thymidylate synthase [Clostridium botulinum H04402 065]
          Length = 142

 Score = 36.8 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 183 LLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS-----RSPRTLPQMIINPNIV 237
           L    LA+ +    G++ H +   H+Y   F+ A+  L      +   + P+M    N  
Sbjct: 7   LFKNFLATELNLDIGQYSHQVATTHIYEPDFKLAEKVLCESKSAKKELSFPRMPKKDNWE 66

Query: 238 DL 239
           DL
Sbjct: 67  DL 68


>gi|300863871|ref|ZP_07108793.1| Sensor protein [Oscillatoria sp. PCC 6506]
 gi|300338139|emb|CBN53939.1| Sensor protein [Oscillatoria sp. PCC 6506]
          Length = 491

 Score = 36.8 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 67/212 (31%), Gaps = 14/212 (6%)

Query: 37  DLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDEWADKDGELGPIYGV 96
           D S   P  ++K V  K++  E  W L        +  +   + D     D EL P    
Sbjct: 78  DRSMNLPGQSSKVV--KAMYFEPPWNLDQQ-----VRDYITKVRDLVQSPDIELEPNNPH 130

Query: 97  QWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDN 156
                    G +++ + ++V   + +  S +  +   ++ L  +     C    Q     
Sbjct: 131 LNYIVTAAYGRLLESLDAVVTQYQHESESEQLEMDIKHLELYQE----SCAATTQAEAQA 186

Query: 157 GKLSCQLY-QRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQ 215
            +L   L   +     L     ++S   L   +A  I          L    +Y      
Sbjct: 187 AELEKALIGLKQAQAKLLHSEKMSSLGQLVASVAHEINNPVSFIYGNLSHAEVYTQDLLH 246

Query: 216 ADLQLSRSPRTLPQMIINPNIVDLL-SFRYED 246
               L R   + P   I  +I D+   F  ED
Sbjct: 247 LLE-LYREYYSEPTPEIQQHIKDIDLDFLIED 277


>gi|170580066|ref|XP_001895098.1| hypothetical protein Bm1_18205 [Brugia malayi]
 gi|158598062|gb|EDP36047.1| hypothetical protein Bm1_18205 [Brugia malayi]
          Length = 83

 Score = 36.4 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 9/63 (14%)

Query: 81  DEWADKDGELGPIYGVQWRSW--------PDYDGNVIDQISSIVQSLRADPYSRRHIVSA 132
           D     +G+L P+YG Q  +          DY    IDQ+S I+  ++ +P++R  I++A
Sbjct: 21  DFSDRSEGDLRPVYGFQGNTVLAEYRGMDADYINQGIDQLSEIIDLMKNEPHNR-CILNA 79

Query: 133 WNV 135
           WNV
Sbjct: 80  WNV 82


>gi|194900964|ref|XP_001980025.1| GG20737 [Drosophila erecta]
 gi|190651728|gb|EDV48983.1| GG20737 [Drosophila erecta]
          Length = 1096

 Score = 36.0 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 126 RRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLT 185
           RRH+++     +   +    C       V+N +L   +Y       +        Y+   
Sbjct: 489 RRHLINTHKETIDPAL----CEHCGWRSVNNRELHFHMY-------MEHQIKSLLYTFAE 537

Query: 186 MMLASVIGFQYGEFIHTLGDVH--------LYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
             L +      GE    + + H        +Y N   + +LQL R  ++  +     +  
Sbjct: 538 CALCNQSYLTKGELETHINEAHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDG- 596

Query: 238 DLLSFRYEDF 247
            ++    E+F
Sbjct: 597 -IIDETDEEF 605


>gi|195501374|ref|XP_002097770.1| Cen190 [Drosophila yakuba]
 gi|194183871|gb|EDW97482.1| Cen190 [Drosophila yakuba]
          Length = 1096

 Score = 35.6 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 126 RRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLT 185
           RRH+++     +   +    C       V+N +L   +Y       +        Y+   
Sbjct: 491 RRHLINTHKETIDPAL----CEHCGWRSVNNRELHFHMY-------MEHQIKSLLYTFAE 539

Query: 186 MMLASVIGFQYGEFIHTLGDVH--------LYNNHFEQADLQLSRSPRTLPQMIINPNIV 237
             L +      GE    + + H        +Y N   + +LQL R  ++  +     +  
Sbjct: 540 CALCNQSYLTKGELEAHINEAHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDG- 598

Query: 238 DLLSFRYEDF 247
            ++    E+F
Sbjct: 599 -IIDETDEEF 607


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.318    0.152    0.501 

Lambda     K      H
   0.267   0.0466    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,799,088,434
Number of Sequences: 14124377
Number of extensions: 258886399
Number of successful extensions: 769794
Number of sequences better than 10.0: 2431
Number of HSP's better than 10.0 without gapping: 4712
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 756838
Number of HSP's gapped (non-prelim): 5536
length of query: 264
length of database: 4,842,793,630
effective HSP length: 136
effective length of query: 128
effective length of database: 2,921,878,358
effective search space: 374000429824
effective search space used: 374000429824
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 80 (35.2 bits)